Query 025807
Match_columns 248
No_of_seqs 130 out of 1294
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 18:01:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025807.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025807hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ljs_A Fructokinase; fructokia 100.0 2.3E-34 7.8E-39 246.6 19.5 205 27-232 3-207 (338)
2 3pl2_A Sugar kinase, ribokinas 100.0 3.1E-33 1.1E-37 237.6 21.3 204 28-232 8-212 (319)
3 4gm6_A PFKB family carbohydrat 100.0 2.4E-33 8.3E-38 241.4 19.8 203 27-231 23-227 (351)
4 3hj6_A Fructokinase, FRK; fruc 100.0 3.7E-33 1.3E-37 238.1 17.5 203 27-232 20-222 (327)
5 1v1a_A 2-keto-3-deoxygluconate 100.0 7.9E-32 2.7E-36 228.1 23.9 203 28-233 1-204 (309)
6 4du5_A PFKB; structural genomi 100.0 2.8E-32 9.7E-37 233.5 21.1 203 28-231 26-230 (336)
7 2qcv_A Putative 5-dehydro-2-de 100.0 1.6E-31 5.4E-36 228.3 23.5 205 28-232 11-216 (332)
8 3iq0_A Putative ribokinase II; 100.0 5.7E-32 2E-36 231.0 17.6 203 28-231 3-206 (330)
9 1tyy_A Putative sugar kinase; 100.0 7.8E-32 2.7E-36 231.0 17.5 207 12-232 13-219 (339)
10 3ewm_A Uncharacterized sugar k 100.0 5.1E-31 1.7E-35 223.5 21.0 201 28-232 1-202 (313)
11 3ktn_A Carbohydrate kinase, PF 100.0 6.1E-31 2.1E-35 225.9 21.7 203 28-232 2-210 (346)
12 4e69_A 2-dehydro-3-deoxyglucon 100.0 5.7E-31 2E-35 224.7 21.3 215 5-231 5-224 (328)
13 4e3a_A Sugar kinase protein; s 100.0 6.7E-31 2.3E-35 226.3 18.0 199 28-232 25-247 (352)
14 2v78_A Fructokinase; transfera 100.0 1.1E-30 3.8E-35 221.4 19.0 199 28-231 1-204 (313)
15 3lhx_A Ketodeoxygluconokinase; 100.0 1.2E-30 4E-35 221.8 18.9 195 29-231 5-208 (319)
16 3go6_A Ribokinase RBSK; phosph 100.0 6.1E-30 2.1E-34 216.7 20.8 188 27-232 18-209 (310)
17 3vas_A Putative adenosine kina 100.0 3.6E-30 1.2E-34 223.1 18.1 196 28-232 24-250 (370)
18 2dcn_A Hypothetical fructokina 100.0 6.1E-30 2.1E-34 216.6 18.5 199 28-232 1-204 (311)
19 3h49_A Ribokinase; transferase 100.0 1.3E-29 4.4E-34 216.0 19.3 196 28-232 5-208 (325)
20 3ry7_A Ribokinase; transferase 100.0 7.5E-30 2.6E-34 215.3 17.7 188 28-232 2-196 (304)
21 2c4e_A Sugar kinase MJ0406; tr 100.0 5.3E-30 1.8E-34 216.2 16.4 188 28-232 5-196 (302)
22 2fv7_A Ribokinase; structural 100.0 2.6E-29 8.7E-34 214.7 20.7 198 13-231 14-217 (331)
23 2rbc_A Sugar kinase, AGR_C_456 100.0 2.4E-29 8.3E-34 215.8 20.2 186 28-231 29-219 (343)
24 1rkd_A Ribokinase; carbohydrat 100.0 1.8E-29 6E-34 213.6 17.3 187 28-231 4-196 (309)
25 3ikh_A Carbohydrate kinase; tr 100.0 8.5E-30 2.9E-34 214.7 13.6 186 28-231 2-193 (299)
26 3otx_A Adenosine kinase, putat 100.0 7.1E-29 2.4E-33 213.2 17.2 196 27-232 6-234 (347)
27 2pkf_A Adenosine kinase; trans 100.0 2.1E-28 7E-33 209.3 18.7 190 28-232 10-215 (334)
28 3b1n_A Ribokinase, putative; r 100.0 4E-28 1.4E-32 206.9 20.2 187 29-232 1-202 (326)
29 3loo_A Anopheles gambiae adeno 100.0 1.7E-28 6E-33 212.2 16.6 208 12-232 10-248 (365)
30 2qhp_A Fructokinase; NP_810670 100.0 5.1E-28 1.7E-32 203.3 18.9 185 28-232 3-188 (296)
31 3kzh_A Probable sugar kinase; 100.0 8.2E-28 2.8E-32 205.1 18.5 189 27-231 5-198 (328)
32 3uq6_A Adenosine kinase, putat 100.0 5.2E-28 1.8E-32 209.7 16.8 209 12-232 13-252 (372)
33 2nwh_A AGR_C_3442P, carbohydra 100.0 7.7E-28 2.6E-32 204.3 16.5 190 28-232 3-199 (317)
34 2hlz_A Ketohexokinase; non-pro 100.0 1.3E-27 4.4E-32 202.5 17.7 184 28-229 17-213 (312)
35 1vm7_A Ribokinase; TM0960, str 100.0 3.9E-27 1.3E-31 199.5 18.9 182 28-232 14-200 (311)
36 2abs_A Adenosine kinase, AK; r 100.0 4.1E-27 1.4E-31 204.9 19.4 195 28-232 32-253 (383)
37 1bx4_A Protein (adenosine kina 100.0 1.6E-27 5.4E-32 204.6 16.6 195 28-232 6-233 (345)
38 2afb_A 2-keto-3-deoxygluconate 100.0 2.3E-26 7.8E-31 197.8 23.4 200 28-231 12-215 (351)
39 3bf5_A Ribokinase related prot 99.9 2.1E-27 7.1E-32 200.7 14.9 181 28-233 20-203 (306)
40 3ie7_A LIN2199 protein; phosph 99.9 2.3E-25 8E-30 189.2 17.1 184 29-232 3-199 (320)
41 4e84_A D-beta-D-heptose 7-phos 99.9 1.5E-25 5E-30 192.9 15.4 195 12-231 43-247 (352)
42 2jg1_A Tagatose-6-phosphate ki 99.9 9.2E-25 3.2E-29 186.4 17.6 185 27-232 19-215 (330)
43 2f02_A Tagatose-6-phosphate ki 99.9 1.6E-24 5.4E-29 184.4 18.3 183 28-232 2-197 (323)
44 2ajr_A Sugar kinase, PFKB fami 99.9 2.5E-25 8.6E-30 189.9 12.5 183 28-231 12-214 (331)
45 3umo_A 6-phosphofructokinase i 99.9 3.4E-24 1.2E-28 181.1 18.1 183 30-232 3-197 (309)
46 3cqd_A 6-phosphofructokinase i 99.9 2.1E-24 7.2E-29 182.4 16.7 182 29-232 2-197 (309)
47 2abq_A Fructose 1-phosphate ki 99.9 3.3E-23 1.1E-27 174.9 17.4 180 31-232 3-191 (306)
48 3kd6_A Carbohydrate kinase, PF 99.9 1.5E-23 5.1E-28 177.6 13.3 181 28-232 2-185 (313)
49 2jg5_A Fructose 1-phosphate ki 99.9 7.8E-23 2.7E-27 172.4 16.8 181 30-232 2-191 (306)
50 1vk4_A PFKB carbohydrate kinas 99.8 4.5E-21 1.5E-25 161.3 9.3 174 29-232 12-195 (298)
51 2yxt_A Pyridoxal kinase; beta 99.0 3.8E-10 1.3E-14 95.0 4.7 130 77-231 12-159 (312)
52 2ddm_A Pyridoxine kinase; pyri 98.8 2.7E-09 9.2E-14 88.5 5.0 137 74-232 19-169 (283)
53 1jxh_A Phosphomethylpyrimidine 98.2 2.9E-06 1E-10 70.3 7.4 71 155-232 95-171 (288)
54 3drw_A ADP-specific phosphofru 98.1 4.9E-05 1.7E-09 66.6 13.3 163 57-232 113-319 (474)
55 1ub0_A THID, phosphomethylpyri 98.0 1.5E-05 5.2E-10 64.7 7.1 72 154-232 70-147 (258)
56 3mbh_A Putative phosphomethylp 97.8 4.2E-05 1.4E-09 63.5 7.1 77 154-232 77-156 (291)
57 1ua4_A Glucokinase, ADP-depend 97.8 7.3E-05 2.5E-09 65.5 8.6 161 59-232 109-302 (455)
58 2i5b_A Phosphomethylpyrimidine 97.7 0.00014 4.7E-09 59.5 8.5 74 154-232 74-151 (271)
59 1gc5_A ADP-dependent glucokina 97.6 0.00057 1.9E-08 59.9 11.5 159 59-230 117-313 (467)
60 1l2l_A ADP-dependent glucokina 97.6 0.00043 1.5E-08 60.6 10.0 159 59-230 112-303 (457)
61 3pzs_A PM kinase, pyridoxamine 97.5 0.00025 8.5E-09 58.7 7.9 76 153-232 76-158 (289)
62 3zs7_A Pyridoxal kinase; trans 97.5 0.00016 5.3E-09 60.3 6.3 77 153-232 75-159 (300)
63 3h74_A Pyridoxal kinase; PSI-I 97.5 0.00021 7.2E-09 58.9 6.7 75 154-232 74-151 (282)
64 1ekq_A Hydroxyethylthiazole ki 97.1 0.0015 5.3E-08 53.4 7.7 78 150-233 54-134 (272)
65 3rm5_A Hydroxymethylpyrimidine 96.6 0.0046 1.6E-07 55.7 7.2 75 153-232 90-169 (550)
66 1v8a_A Hydroxyethylthiazole ki 96.2 0.017 5.7E-07 47.0 8.1 79 150-233 52-131 (265)
67 3dzv_A 4-methyl-5-(beta-hydrox 95.1 0.12 4E-06 42.2 8.9 77 150-231 54-131 (273)
68 3hpd_A Hydroxyethylthiazole ki 94.1 0.29 1E-05 39.6 8.9 78 150-232 52-130 (265)
69 3nl6_A Thiamine biosynthetic b 92.7 0.5 1.7E-05 42.3 9.0 76 150-232 301-379 (540)
70 2r3b_A YJEF-related protein; p 90.1 0.38 1.3E-05 39.9 5.1 73 151-232 108-182 (310)
71 3bgk_A SMU.573, putative uncha 87.5 0.18 6E-06 41.9 1.3 73 151-232 122-196 (311)
72 3rss_A Putative uncharacterize 72.5 2.7 9.4E-05 37.2 3.6 72 150-232 316-388 (502)
73 3rpz_A ADP/ATP-dependent NAD(P 63.2 6.3 0.00022 31.9 3.7 68 152-233 96-163 (279)
74 3can_A Pyruvate-formate lyase- 55.6 53 0.0018 23.9 7.7 43 171-221 18-60 (182)
75 2re2_A Uncharacterized protein 53.2 7.3 0.00025 27.8 2.2 38 61-104 65-102 (136)
76 1tqx_A D-ribulose-5-phosphate 49.3 20 0.00069 28.0 4.4 38 174-219 100-142 (227)
77 2fcj_A Small toprim domain pro 48.5 12 0.00041 26.1 2.6 78 153-241 25-104 (119)
78 3bc8_A O-phosphoseryl-tRNA(SEC 41.5 1.2E+02 0.004 26.3 8.4 47 172-222 215-263 (450)
79 3ctl_A D-allulose-6-phosphate 41.1 28 0.00095 27.2 4.0 56 152-220 78-133 (231)
80 1jzt_A Hypothetical 27.5 kDa p 39.7 39 0.0013 26.6 4.7 43 60-103 70-115 (246)
81 4fyk_A Deoxyribonucleoside 5'- 39.4 94 0.0032 22.5 6.4 66 157-224 4-77 (152)
82 3kgw_A Alanine-glyoxylate amin 39.3 88 0.003 25.4 7.2 38 154-193 148-186 (393)
83 3i3l_A Alkylhalidase CMLS; fla 39.0 25 0.00086 31.6 3.9 28 3-36 4-31 (591)
84 1fob_A Beta-1,4-galactanase; B 38.2 69 0.0023 26.3 6.3 25 170-194 58-82 (334)
85 3kbq_A Protein TA0487; structu 36.4 54 0.0018 24.3 4.8 35 63-99 24-58 (172)
86 2wfb_A Putative uncharacterize 35.8 17 0.00059 24.9 1.9 40 60-104 52-91 (120)
87 2o8n_A APOA-I binding protein; 34.4 47 0.0016 26.5 4.4 42 61-103 92-135 (265)
88 4gqr_A Pancreatic alpha-amylas 34.0 27 0.00094 29.9 3.3 23 170-192 75-97 (496)
89 1y5e_A Molybdenum cofactor bio 33.4 89 0.0031 22.7 5.6 35 63-99 32-66 (169)
90 1rdu_A Conserved hypothetical 33.0 12 0.00042 25.5 0.7 39 61-104 48-86 (116)
91 3lvm_A Cysteine desulfurase; s 32.1 1.2E+02 0.0042 25.0 7.0 21 174-194 182-202 (423)
92 3ndn_A O-succinylhomoserine su 31.2 96 0.0033 26.1 6.2 40 153-194 165-205 (414)
93 3ri6_A O-acetylhomoserine sulf 31.1 1.4E+02 0.0048 25.3 7.3 41 153-195 166-207 (430)
94 1eo1_A Hypothetical protein MT 31.1 16 0.00055 25.2 1.1 38 62-104 52-89 (124)
95 3f0h_A Aminotransferase; RER07 31.0 2.1E+02 0.0071 23.0 8.4 20 174-193 163-182 (376)
96 3inp_A D-ribulose-phosphate 3- 29.7 35 0.0012 26.9 2.9 121 81-220 32-161 (246)
97 2fq6_A Cystathionine beta-lyas 29.5 79 0.0027 26.7 5.4 40 154-195 167-209 (415)
98 2yx6_A Hypothetical protein PH 29.3 24 0.00084 24.1 1.8 34 66-104 54-87 (121)
99 3nmy_A Xometc, cystathionine g 29.0 93 0.0032 26.1 5.7 39 153-193 151-190 (400)
100 3iwt_A 178AA long hypothetical 28.5 1.7E+02 0.0058 21.2 7.1 34 63-98 41-74 (178)
101 2yci_X 5-methyltetrahydrofolat 28.5 1.8E+02 0.0062 23.1 7.0 64 151-223 44-109 (271)
102 1eg5_A Aminotransferase; PLP-d 28.1 1.8E+02 0.0061 23.3 7.3 19 175-193 159-179 (384)
103 3fdb_A Beta C-S lyase, putativ 27.9 2.3E+02 0.008 22.7 10.0 51 143-193 139-191 (377)
104 2dha_A FLJ20171 protein; RRM d 27.8 1.1E+02 0.0038 20.9 5.1 45 58-102 5-49 (123)
105 1g94_A Alpha-amylase; beta-alp 27.7 41 0.0014 28.8 3.3 22 171-192 64-85 (448)
106 2pjk_A 178AA long hypothetical 27.7 1.4E+02 0.0047 22.0 5.8 35 63-99 41-75 (178)
107 4hvk_A Probable cysteine desul 27.0 1.1E+02 0.0038 24.5 5.8 16 176-192 159-174 (382)
108 3c8f_A Pyruvate formate-lyase 27.0 1.8E+02 0.0062 21.7 6.7 68 156-231 71-143 (245)
109 2dr1_A PH1308 protein, 386AA l 26.7 2.5E+02 0.0085 22.5 8.7 40 153-194 145-185 (386)
110 1e5e_A MGL, methionine gamma-l 26.6 2E+02 0.0069 23.8 7.5 21 174-194 166-187 (404)
111 3ovp_A Ribulose-phosphate 3-ep 26.3 58 0.002 25.2 3.6 54 153-220 86-139 (228)
112 1mkz_A Molybdenum cofactor bio 26.3 1.3E+02 0.0043 22.0 5.4 35 63-99 29-63 (172)
113 1lwj_A 4-alpha-glucanotransfer 26.0 47 0.0016 28.4 3.3 23 171-193 69-91 (441)
114 3vzx_A Heptaprenylglyceryl pho 25.7 1.7E+02 0.0057 22.7 6.1 66 151-233 28-97 (228)
115 1wza_A Alpha-amylase A; hydrol 25.7 53 0.0018 28.4 3.7 23 171-193 81-103 (488)
116 1wpc_A Glucan 1,4-alpha-maltoh 25.4 48 0.0016 28.7 3.3 22 171-192 82-103 (485)
117 2y5s_A DHPS, dihydropteroate s 25.3 2.7E+02 0.0092 22.5 7.5 43 151-193 56-105 (294)
118 1ud2_A Amylase, alpha-amylase; 25.2 48 0.0017 28.6 3.3 22 171-192 80-101 (480)
119 3pwk_A Aspartate-semialdehyde 25.2 3E+02 0.01 22.9 8.5 91 81-195 5-97 (366)
120 3bh4_A Alpha-amylase; calcium, 25.1 49 0.0017 28.6 3.3 22 171-192 78-99 (483)
121 4aie_A Glucan 1,6-alpha-glucos 25.0 48 0.0017 28.9 3.3 23 171-193 79-101 (549)
122 1o13_A Probable NIFB protein; 24.9 24 0.00083 24.9 1.1 34 66-104 67-100 (136)
123 2wc7_A Alpha amylase, catalyti 24.5 53 0.0018 28.4 3.4 23 171-193 102-124 (488)
124 3qhx_A Cystathionine gamma-syn 24.5 1.1E+02 0.0038 25.4 5.4 41 153-195 150-191 (392)
125 3nco_A Endoglucanase fncel5A; 24.4 54 0.0018 26.5 3.3 24 172-195 82-105 (320)
126 1ht6_A AMY1, alpha-amylase iso 24.4 52 0.0018 27.7 3.3 22 171-192 68-89 (405)
127 3tz6_A Aspartate-semialdehyde 24.4 3E+02 0.01 22.7 8.3 88 81-194 4-95 (344)
128 2ywl_A Thioredoxin reductase r 23.8 78 0.0027 22.7 3.8 41 64-104 13-73 (180)
129 1mxg_A Alpha amylase; hyperthe 23.8 54 0.0019 28.0 3.3 22 171-192 86-107 (435)
130 2ch1_A 3-hydroxykynurenine tra 23.7 1.9E+02 0.0064 23.5 6.6 39 154-194 143-182 (396)
131 4dgh_A Sulfate permease family 23.7 1.7E+02 0.0059 19.7 7.3 70 154-232 48-124 (130)
132 1hvx_A Alpha-amylase; hydrolas 23.6 54 0.0018 28.7 3.3 22 171-192 81-102 (515)
133 3okp_A GDP-mannose-dependent a 23.5 1.2E+02 0.0042 24.5 5.4 69 153-229 85-154 (394)
134 1eye_A DHPS 1, dihydropteroate 23.4 2.8E+02 0.0097 22.1 7.5 43 151-193 39-88 (280)
135 2dh2_A 4F2 cell-surface antige 23.1 65 0.0022 27.4 3.7 23 171-193 81-103 (424)
136 3qfa_A Thioredoxin reductase 1 23.1 86 0.0029 27.4 4.5 43 63-105 221-268 (519)
137 2guy_A Alpha-amylase A; (beta- 23.0 58 0.002 28.1 3.4 22 171-192 97-118 (478)
138 1jae_A Alpha-amylase; glycosid 23.0 55 0.0019 28.2 3.2 22 171-192 74-95 (471)
139 3igs_A N-acetylmannosamine-6-p 22.8 2.1E+02 0.0071 22.0 6.3 63 146-221 93-155 (232)
140 3qja_A IGPS, indole-3-glycerol 22.7 2.8E+02 0.0094 22.0 7.1 64 146-223 127-190 (272)
141 1ebd_A E3BD, dihydrolipoamide 22.7 83 0.0028 26.8 4.3 43 63-105 181-229 (455)
142 1gcy_A Glucan 1,4-alpha-maltot 22.6 58 0.002 28.6 3.3 22 171-192 92-113 (527)
143 2dqw_A Dihydropteroate synthas 22.5 3E+02 0.01 22.2 7.3 43 151-193 62-111 (294)
144 2is8_A Molybdopterin biosynthe 22.4 95 0.0032 22.5 4.0 35 63-99 22-56 (164)
145 3lyl_A 3-oxoacyl-(acyl-carrier 22.3 1.1E+02 0.0036 23.3 4.5 47 60-108 14-60 (247)
146 2z1k_A (NEO)pullulanase; hydro 22.1 61 0.0021 27.9 3.3 23 171-193 96-118 (475)
147 3q58_A N-acetylmannosamine-6-p 22.0 2.2E+02 0.0074 21.9 6.2 63 146-221 93-155 (229)
148 3isl_A Purine catabolism prote 21.9 3.1E+02 0.011 22.2 7.7 38 154-193 136-174 (416)
149 3g5s_A Methylenetetrahydrofola 21.8 86 0.0029 27.1 4.0 23 61-83 10-32 (443)
150 2ckc_A Chromodomain-helicase-D 21.6 55 0.0019 20.7 2.1 16 231-246 46-61 (80)
151 2gk4_A Conserved hypothetical 21.5 62 0.0021 25.3 2.9 49 29-84 4-52 (232)
152 3fwy_A Light-independent proto 21.5 71 0.0024 26.0 3.4 21 63-83 64-84 (314)
153 3ucx_A Short chain dehydrogena 21.4 1.4E+02 0.0049 23.0 5.2 46 60-107 20-65 (264)
154 3dgh_A TRXR-1, thioredoxin red 21.4 1E+02 0.0034 26.5 4.6 42 63-105 198-245 (483)
155 1ua7_A Alpha-amylase; beta-alp 21.3 59 0.002 27.6 3.0 23 170-192 73-95 (422)
156 1ur4_A Galactanase; hydrolase, 21.0 79 0.0027 26.9 3.7 25 170-194 87-111 (399)
157 1xhc_A NADH oxidase /nitrite r 20.9 76 0.0026 26.2 3.6 42 63-104 154-200 (367)
158 3uk7_A Class I glutamine amido 20.8 2.2E+02 0.0076 23.6 6.5 98 91-192 222-321 (396)
159 2aaa_A Alpha-amylase; glycosid 20.8 62 0.0021 28.0 3.1 22 171-192 97-118 (484)
160 2raf_A Putative dinucleotide-b 20.7 2.3E+02 0.0079 21.1 6.1 27 79-105 20-46 (209)
161 2rfv_A Methionine gamma-lyase; 20.4 2.9E+02 0.0099 22.6 7.2 40 154-195 149-189 (398)
162 4aef_A Neopullulanase (alpha-a 20.3 67 0.0023 29.0 3.3 23 171-193 285-307 (645)
163 4fn4_A Short chain dehydrogena 20.1 1.3E+02 0.0044 23.6 4.6 46 61-108 17-62 (254)
164 3ffr_A Phosphoserine aminotran 20.0 2.7E+02 0.0094 21.9 6.8 49 56-107 64-112 (362)
No 1
>3ljs_A Fructokinase; fructokianse, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.97A {Xylella fastidiosa TEMECULA1} SCOP: c.72.1.0 PDB: 3lki_A*
Probab=100.00 E-value=2.3e-34 Score=246.63 Aligned_cols=205 Identities=38% Similarity=0.573 Sum_probs=184.0
Q ss_pred CCccEEEEcceeeeeccCCCCcccccCCCccccCCChHHHHHHHHHHcCCceeEEEeeCCCHHHHHHHHHHHHCCCCccc
Q 025807 27 YDRLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSG 106 (248)
Q Consensus 27 ~~~~ilviG~~~vD~~~~~~~~p~~~~~~~~~~~GG~a~N~a~ala~lG~~v~l~~~vG~D~~g~~i~~~L~~~gI~~~~ 106 (248)
++++|+|+|++++|++...++.|.. +..+...+||+++|+|.+|++||.++.++|.||+|.+|+.+++.|+++||++++
T Consensus 3 ~~~~v~viG~~~iD~~~~~~~~~~~-~~~~~~~~GG~~~NvA~~la~LG~~~~~ig~vG~D~~g~~l~~~l~~~gV~~~~ 81 (338)
T 3ljs_A 3 LKKTILCFGEALIDMLAQPLVKKGM-PRAFLQCAGGAPANVAVAVARLGGAVQFVGMLGSDMFGDFLFDSFAEAGVVTDG 81 (338)
T ss_dssp -CCEEEEESCCEEEEEECCCSSTTS-CCCEEEEEECHHHHHHHHHHHHTCCEEEESEEESSHHHHHHHHHHHHHTCBCTT
T ss_pred CCCCEEEEChhhhheeccCCCCccc-hhceeecCCChHHHHHHHHHhCCCCEEEEeeccCCHHHHHHHHHHHHcCCCcee
Confidence 3678999999999999988876654 667789999999999999999999999999999999999999999999999999
Q ss_pred eEEcCCCCceEEEEEEecCCCceEEEecCCCcccccCcccchHhhhcCccEEEEcccccccchhHHHHHHHHHHHHHCCC
Q 025807 107 VRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGS 186 (248)
Q Consensus 107 v~~~~~~~T~~~~i~i~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~a~~~g~ 186 (248)
+.+.++.+|+++++.++++|+|++.+++.++++..++++++..+.+++++++|++++.+..+.+.+.+.++++.++++|+
T Consensus 82 v~~~~~~~T~~~~v~~~~~g~r~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~g~ 161 (338)
T 3ljs_A 82 IVRTSTAKTALAFVALDAHGERSFSFYRPPAADLLFRVEHFQDASFSDALIFHACSNSMTDADIAEVTFEGMRRAQAAGA 161 (338)
T ss_dssp CEEESSSCCCEEEEECCSTTCCEEEEECSSCGGGGCCGGGCCHHHHHTEEEEEEEGGGGSSHHHHHHHHHHHHHHHHTTC
T ss_pred EEEcCCCCceEEEEEECCCCCeEEEEeCCCChhHhCCHhhcCHhHhcCCCEEEECChHhcCchHHHHHHHHHHHHHHcCC
Confidence 98877889999999999889999887766677777888888777788999999999877777788999999999999999
Q ss_pred eEEEeCCCCCCCCCCHHHHHHHHHHhhhhCCEEEeCHHHHHHhHHH
Q 025807 187 ILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVKFETRYSCIQK 232 (248)
Q Consensus 187 ~v~~D~~~~~~~w~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~ 232 (248)
++++||+.+..+|.+.+..++.+.++++++|++++|++|++.|+|.
T Consensus 162 ~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~ 207 (338)
T 3ljs_A 162 IVSFDLNFRPMLWPNGENPASRLWKGLSLADVVKLSSEELDYLANT 207 (338)
T ss_dssp EEEEECCCCGGGSCTTCCTHHHHHHHHHTCSEEEEEHHHHHHHHHH
T ss_pred EEEEECCCChhhcCCHHHHHHHHHHHHhhCCEEEecHHHHHHHhCC
Confidence 9999999988888655555778889999999999999999999985
No 2
>3pl2_A Sugar kinase, ribokinase family; PFKB PFAM motif, inositol phosphate metabolism, ribokinase-L structural genomics; HET: MSE CIT; 1.89A {Corynebacterium glutamicum} SCOP: c.72.1.0
Probab=100.00 E-value=3.1e-33 Score=237.63 Aligned_cols=204 Identities=25% Similarity=0.390 Sum_probs=180.1
Q ss_pred CccEEEEcceeeeeccCCCCcccccCCCccccCCChHHHHHHHHHHcCCceeEEEeeCCCHHHHHHHHHHHHCCCCccce
Q 025807 28 DRLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGV 107 (248)
Q Consensus 28 ~~~ilviG~~~vD~~~~~~~~p~~~~~~~~~~~GG~a~N~a~ala~lG~~v~l~~~vG~D~~g~~i~~~L~~~gI~~~~v 107 (248)
+++|+++|++++|++...++.|...+..+...+||+++|+|.+|++||.++.++|.+|+|.+|+.+++.|+++||+++++
T Consensus 8 ~~~v~~iG~~~~D~~~~~~~~p~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~g~~i~~~l~~~gv~~~~v 87 (319)
T 3pl2_A 8 THEVLAIGRLGVDIYPLQSGVGLADVQSFGKYLGGSAANVSVAAARHGHNSALLSRVGNDPFGEYLLAELERLGVDNQYV 87 (319)
T ss_dssp CCSEEEESCCEEEECBSSSSCCGGGCCCBCCEEECHHHHHHHHHHHTTCCEEEEEEEESSHHHHHHHHHHHHTTEECTTE
T ss_pred CCCEEEEChhheeeecccCCCCccccceeeecCCCcHHHHHHHHHHCCCceEEEEEeCCCHHHHHHHHHHHHcCCccccE
Confidence 57899999999999999888888778888999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCCCceEEEEEEecCCCceEEEecCCCc-ccccCcccchHhhhcCccEEEEcccccccchhHHHHHHHHHHHHHCCC
Q 025807 108 RYDSTARTALAFVTLRADGEREFLFFRHPSA-DMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGS 186 (248)
Q Consensus 108 ~~~~~~~T~~~~i~i~~~g~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~a~~~g~ 186 (248)
.+.++.+|+++++.++.+|++++.+++.+++ +..++++++..+.+++++++|++|+.+..+...+....+++.+++ +.
T Consensus 88 ~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~ 166 (319)
T 3pl2_A 88 ATDQTFKTPVTFCEIFPPDDFPLYFYREPKAPDLNIESADVSLDDVREADILWFTLTGFSEEPSRGTHREILTTRAN-RR 166 (319)
T ss_dssp EEESSSCCCEEEECCBTTTBCCEEEECCSCCGGGGCCGGGSCHHHHHHCSEEEEEGGGGSSTTHHHHHHHHHHHHTT-CS
T ss_pred EecCCCCceEEEEEEcCCCCeeEEEecCCCcccccCChhhCCHHHhccCCEEEEecccccCchhHHHHHHHHHHHHH-CC
Confidence 8878889999999888888998887765555 667788888777788999999999876655556666777776665 67
Q ss_pred eEEEeCCCCCCCCCCHHHHHHHHHHhhhhCCEEEeCHHHHHHhHHH
Q 025807 187 ILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVKFETRYSCIQK 232 (248)
Q Consensus 187 ~v~~D~~~~~~~w~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~ 232 (248)
++++|++.+...|.+.....+.+.++++++|++++|++|++.|+|.
T Consensus 167 ~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~ 212 (319)
T 3pl2_A 167 HTIFDLDYRPMFWESPEEATKQAEWALQHSTVAVGNKEECEIAVGE 212 (319)
T ss_dssp CEEEECCCCGGGSSCHHHHHHHHHHHHTTCSEEEECHHHHHHHHSC
T ss_pred cEEEeCCCChhhcCCHHHHHHHHHHHHHhCCEEEcCHHHHHHHcCC
Confidence 7899999999999888888889999999999999999999999873
No 3
>4gm6_A PFKB family carbohydrate kinase; enzyme function initiative, transferase; 2.00A {Listeria grayi dsm 20601}
Probab=100.00 E-value=2.4e-33 Score=241.38 Aligned_cols=203 Identities=23% Similarity=0.278 Sum_probs=169.1
Q ss_pred CCccEEEEcceeeeeccCCCCcccccCCCccccCCChHHHHHHHHHHcCCceeEEEeeCCCHHHHHHHHHHHHCCCCccc
Q 025807 27 YDRLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSG 106 (248)
Q Consensus 27 ~~~~ilviG~~~vD~~~~~~~~p~~~~~~~~~~~GG~a~N~a~ala~lG~~v~l~~~vG~D~~g~~i~~~L~~~gI~~~~ 106 (248)
+|.+|+++|++++|+++.. ..|...++.+...+||+++|+|.+|++||.++.++|.||+|++|+.+++.|+++||++++
T Consensus 23 mm~kv~~~GE~m~~l~p~~-~~~~~~~~~~~~~~GG~~aNvA~~larLG~~~~~ig~vG~D~~G~~l~~~L~~~GVdt~~ 101 (351)
T 4gm6_A 23 MMKQVVTIGELLMRLSTQQ-GIPFSQTTALDIHIGGAEANVAVNLSKLGHPTRIATVVPANPIGKMAVEHLWRHQVDTAF 101 (351)
T ss_dssp --CEEEEECCCEEEEECCT-TCCGGGCSEEEEEEECHHHHHHHHHHHTTCCEEEEEEECSSHHHHHHHHHHHHTTEECTT
T ss_pred ccCCEEEEcceeEEecCCC-CCCccccCeEEEecCChHHHHHHHHHHcCCCeEEEEEeCCCHHHHHHHHHHHHcCCCccc
Confidence 5678999999999998764 356667788889999999999999999999999999999999999999999999999999
Q ss_pred eEEcCCCCceEEEEEEecCCCceEEEecCCCcccccCcccch-HhhhcCccEEEEccccc-ccchhHHHHHHHHHHHHHC
Q 025807 107 VRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELD-KNLIKQGSIFHYGSISL-IAEPCRSTQLAAMNLAKES 184 (248)
Q Consensus 107 v~~~~~~~T~~~~i~i~~~g~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~g~~~-~~~~~~~~~~~~~~~a~~~ 184 (248)
+.+.++..|+.+++..+.++++.+.+++...+.......++. .+.+++++++|++|+.+ .++...+.+.++++.++++
T Consensus 102 v~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~d~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~ak~~ 181 (351)
T 4gm6_A 102 VVEAGDRLGTYYLESGTALKAPSVVYDRQHSSFARHKSMDWDLSELLKGIRVLHVSGITIALSTFWLEMVVKIIREAKRN 181 (351)
T ss_dssp EEECSSCCCEEEEECCBTTBCCEEEEECTTCHHHHCCCCCCCHHHHHTTEEEEEEEHHHHHHCHHHHHHHHHHHHHHHHT
T ss_pred ccccCCccceeEEEEccCCcceEEEEccccchhhhCCccccCHHHHHhhcccceecccchhhchhHHHHHHHHHHHHHHc
Confidence 988776555555444455667777777655554444444443 35789999999999765 5666778899999999999
Q ss_pred CCeEEEeCCCCCCCCCCHHHHHHHHHHhhhhCCEEEeCHHHHHHhHH
Q 025807 185 GSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVKFETRYSCIQ 231 (248)
Q Consensus 185 g~~v~~D~~~~~~~w~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g 231 (248)
|++|+|||+.|+.+|. .+..++.+.++++++|++++|++|+..+++
T Consensus 182 g~~v~~D~n~r~~lw~-~~~~~~~~~~~l~~~dil~~N~~Ea~~l~g 227 (351)
T 4gm6_A 182 GIKISFDMNYRAKLWE-LEAAKRAYQQLLPLVDYCSAGQMDAVAFFE 227 (351)
T ss_dssp TCEEEEECCCCTTTSC-HHHHHHHHHHHGGGCSEEECCHHHHHHTSC
T ss_pred CCCcccCCCcCchhhh-hhhHHHHHHHHHHhCCccccCHHHHHHHhC
Confidence 9999999999999995 567788999999999999999999999986
No 4
>3hj6_A Fructokinase, FRK; fructose, transferase, carbohydrate ME; 2.80A {Halothermothrix orenii}
Probab=100.00 E-value=3.7e-33 Score=238.11 Aligned_cols=203 Identities=33% Similarity=0.571 Sum_probs=177.1
Q ss_pred CCccEEEEcceeeeeccCCCCcccccCCCccccCCChHHHHHHHHHHcCCceeEEEeeCCCHHHHHHHHHHHHCCCCccc
Q 025807 27 YDRLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSG 106 (248)
Q Consensus 27 ~~~~ilviG~~~vD~~~~~~~~p~~~~~~~~~~~GG~a~N~a~ala~lG~~v~l~~~vG~D~~g~~i~~~L~~~gI~~~~ 106 (248)
++++|+|+|++++|++...++.|...+......+||+++|+|.+|++||.++.++|.+|+|.+|+.+++.|+++||++++
T Consensus 20 ~~~~v~viG~~~~D~~~~~~~~p~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~ig~vG~D~~g~~i~~~l~~~gv~~~~ 99 (327)
T 3hj6_A 20 GDLDVVSLGEILVDMISTEEVNSLSQSREYTRHFGGSPANIAVNLSRLGKKVALISRLGADAFGNYLLDVLKGEQIITDG 99 (327)
T ss_dssp --CCEEEESCCEEEEECCCCCSSGGGCCEEEEEEECHHHHHHHHHHHTTCCEEEECEEESSHHHHHHHHHHHHTTCBCTT
T ss_pred CCCCEEEEccceEEEeccCCCCCccccceeeeecCcHHHHHHHHHHHcCCcEEEEEEeCCCHHHHHHHHHHHHcCCCccc
Confidence 56889999999999999988888888888899999999999999999999999999999999999999999999999999
Q ss_pred eEEcCCCCceEEEEEEecCCCceEEEecCCCcccccCcccchHhhhcCccEEEEcccccccchhHHHHHHHHHHHHHCCC
Q 025807 107 VRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGS 186 (248)
Q Consensus 107 v~~~~~~~T~~~~i~i~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~a~~~g~ 186 (248)
+.+.++.+|+++++..+ +|+++++.+ .+++..++++++..+.++++|++|++++.+..+.+.+.+.++++.++++|+
T Consensus 100 v~~~~~~~t~~~~v~~~-~g~~~~~~~--~~a~~~~~~~~~~~~~~~~~~~v~~~g~~l~~~~~~~~~~~~~~~a~~~g~ 176 (327)
T 3hj6_A 100 IQQDKERRTTIVYVSKS-TRTPDWLPY--READMYLQEDDIIFELIKRSKVFHLSTFILSRKPARDTAIKAFNYAREQGK 176 (327)
T ss_dssp CEEESSSCCCEEEECCC-TTCCCEEEE--CSGGGGCCSCCCHHHHHC--CEEEEESHHHHSHHHHHHHHHHHHHHHHTTC
T ss_pred EEEcCCCCceEEEEEec-CCCccEEEe--cChhhhCChhhcCHhHhccCCEEEECchHhcCchhHHHHHHHHHHHHHCCC
Confidence 98777889999887665 689998877 457777777777777789999999999866556677889999999999999
Q ss_pred eEEEeCCCCCCCCCCHHHHHHHHHHhhhhCCEEEeCHHHHHHhHHH
Q 025807 187 ILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVKFETRYSCIQK 232 (248)
Q Consensus 187 ~v~~D~~~~~~~w~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~ 232 (248)
++++||+.+...|.+.+...+.+.++++++|++++|++|++.|+|.
T Consensus 177 ~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~ 222 (327)
T 3hj6_A 177 IVCFDPCYRKVLWPEGDDGAGVVEEIISRADFVKPSLDDARHLFGP 222 (327)
T ss_dssp EEEEECCCCGGGSCSSSCSHHHHHHHHTTCSEECCBHHHHHHHHTT
T ss_pred EEEEECCCchhhcCCHHHHHHHHHHHHhhCCEEecCHHHHHHHhCC
Confidence 9999999888778764445677888999999999999999999874
No 5
>1v1a_A 2-keto-3-deoxygluconate kinase; ATP, structural genomics, transferase, riken structural genomics/proteomics initiative, RSGI; HET: KDG ADP; 2.1A {Thermus thermophilus} SCOP: c.72.1.1 PDB: 1v19_A* 1v1b_A* 1v1s_A
Probab=100.00 E-value=7.9e-32 Score=228.08 Aligned_cols=203 Identities=29% Similarity=0.401 Sum_probs=174.3
Q ss_pred CccEEEEcceeeeeccCCCCcccccCCCccccCCChHHHHHHHHHHcCCceeEEEeeCCCHHHHHHHHHHHHCCCCccce
Q 025807 28 DRLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGV 107 (248)
Q Consensus 28 ~~~ilviG~~~vD~~~~~~~~p~~~~~~~~~~~GG~a~N~a~ala~lG~~v~l~~~vG~D~~g~~i~~~L~~~gI~~~~v 107 (248)
||+|+++|++++|+++..+. +...+......+||+++|+|.+|++||.++.++|.+|+|.+|+.+++.|++.||+++++
T Consensus 1 m~~i~viG~~~~D~~~~~~~-~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~~~~vG~D~~g~~i~~~L~~~gv~~~~v 79 (309)
T 1v1a_A 1 MLEVVTAGEPLVALVPQEPG-HLRGKRLLEVYVGGAEVNVAVALARLGVKVGFVGRVGEDELGAMVEERLRAEGVDLTHF 79 (309)
T ss_dssp CCSEEEESCCEEEEECSSSS-CGGGCCEEEEEEECHHHHHHHHHHHHTCCEEEEEEECSSHHHHHHHHHHHHHTCBCTTE
T ss_pred CCcEEEEccceEEEecCCCC-cccchheeeeecCcHHHHHHHHHHHcCCCeEEEEEeCCCHHHHHHHHHHHHcCCCCceE
Confidence 46799999999999975432 33345667789999999999999999999999999999999999999999999999999
Q ss_pred EEcCCCCceEEEEEEecCCCceEEEecCCCcccccCcccchHhhhcCccEEEEccccc-ccchhHHHHHHHHHHHHHCCC
Q 025807 108 RYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISL-IAEPCRSTQLAAMNLAKESGS 186 (248)
Q Consensus 108 ~~~~~~~T~~~~i~i~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~-~~~~~~~~~~~~~~~a~~~g~ 186 (248)
.+.++ +|+++++.++.+|++++.+++..++...++++++....+++++++|++++.. .++.+.+.+..+++.++++|+
T Consensus 80 ~~~~~-~t~~~~~~~~~~g~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~g~ 158 (309)
T 1v1a_A 80 RRAPG-FTGLYLREYLPLGQGRVFYYRKGSAGSALAPGAFDPDYLEGVRFLHLSGITPALSPEARAFSLWAMEEAKRRGV 158 (309)
T ss_dssp EECSS-CCCEEEEEECTTSCEEEEEECTTCSGGGCCTTSSCGGGGTTCSEEEEETTGGGSCHHHHHHHHHHHHHHHTTTC
T ss_pred EEcCC-CCEEEEEEECCCCCceEEEeCCCChhhhCCHhhCChhHhcCCCEEEEeCchhccCchHHHHHHHHHHHHHHcCC
Confidence 88777 9999999888889998877765566667777777666788999999999865 356667888899999999999
Q ss_pred eEEEeCCCCCCCCCCHHHHHHHHHHhhhhCCEEEeCHHHHHHhHHHH
Q 025807 187 ILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVKFETRYSCIQKM 233 (248)
Q Consensus 187 ~v~~D~~~~~~~w~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~ 233 (248)
++++||+.+...|. .+.+++.+.++++++|++++|++|++.|+|..
T Consensus 159 ~v~~D~~~~~~~~~-~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~ 204 (309)
T 1v1a_A 159 RVSLDVNYRQTLWS-PEEARGFLERALPGVDLLFLSEEEAELLFGRV 204 (309)
T ss_dssp EEEEECCCCTTTSC-HHHHHHHHHHHGGGCSEEEEEHHHHHHHHSSH
T ss_pred EEEEeCCCCcccCC-HHHHHHHHHHHHHhCCEEECcHHHHHHHhCCH
Confidence 99999998887784 55667788899999999999999999998754
No 6
>4du5_A PFKB; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.70A {Polaromonas SP}
Probab=100.00 E-value=2.8e-32 Score=233.48 Aligned_cols=203 Identities=28% Similarity=0.430 Sum_probs=177.6
Q ss_pred CccEEEEcceeeeeccCCCCcccccCCCccccCCChHHHHHHHHHHcCCceeEEEeeCCCHHHHHHHHHHHHCCCCccce
Q 025807 28 DRLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGV 107 (248)
Q Consensus 28 ~~~ilviG~~~vD~~~~~~~~p~~~~~~~~~~~GG~a~N~a~ala~lG~~v~l~~~vG~D~~g~~i~~~L~~~gI~~~~v 107 (248)
+++|+|+|++++|++...++ +...+......+||+++|+|.+|++||.++.++|.||+|.+|+.+++.|++.||+++++
T Consensus 26 ~~~vlviG~~~iD~~~~~~g-~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~ig~vG~D~~G~~i~~~L~~~GV~~~~v 104 (336)
T 4du5_A 26 ALDVITFGEAMMLLVADRPG-PLEHAEAFHKRTAGAETNVAIGLARLGLKVGWASRLGTDSMGRYLLAAMAAEGIDCSHV 104 (336)
T ss_dssp CEEEEEECCCEEEEEESSSS-CGGGCCEEEEEEECHHHHHHHHHHHTTCCEEEEEEECSSHHHHHHHHHHHTTTCEEEEE
T ss_pred CCCEEEEChhhhhccCCCCC-ccchhhheeecCCCHHHHHHHHHHhCCCcEEEEEEeCCCHHHHHHHHHHHHcCCCcceE
Confidence 68899999999999987654 33356677899999999999999999999999999999999999999999999999999
Q ss_pred EEcCCCCceEEEEEEecCCCce-EEEecCCCcccccCcccchHhhhcCccEEEEccccc-ccchhHHHHHHHHHHHHHCC
Q 025807 108 RYDSTARTALAFVTLRADGERE-FLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISL-IAEPCRSTQLAAMNLAKESG 185 (248)
Q Consensus 108 ~~~~~~~T~~~~i~i~~~g~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~-~~~~~~~~~~~~~~~a~~~g 185 (248)
.+.++.+|+.+++.++++|+++ +.+++..++...+++++++.+.+++++++|++|+.. .++...+.+..+++.++++|
T Consensus 105 ~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~a~~~l~~~~~~~~~l~~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~g 184 (336)
T 4du5_A 105 VCDATQKTGFQFKGKVTDGSDPPVEYHRKGSAASHMGVADIDEAWLLSARHLHATGVFPAISATTLPAARKTMDLMRAAG 184 (336)
T ss_dssp EECTTSCCCEEEECCCSCC--CCEEEECTTCTGGGCCGGGCCHHHHTTEEEEEEESSGGGSCTTHHHHHHHHHHHHHHTT
T ss_pred EEcCCCCcEEEEEEEcCCCCcceEEEECCCChhHhCChhhCCHhHhccCCEEEEcCchhhCChHHHHHHHHHHHHHHHCC
Confidence 8888889999999888888555 545555677778888888877889999999999754 46666788889999999999
Q ss_pred CeEEEeCCCCCCCCCCHHHHHHHHHHhhhhCCEEEeCHHHHHHhHH
Q 025807 186 SILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVKFETRYSCIQ 231 (248)
Q Consensus 186 ~~v~~D~~~~~~~w~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g 231 (248)
+++++||+.+...|.+.+.+++.+.++++++|++++|+.|++.|+|
T Consensus 185 ~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~pN~~Ea~~l~g 230 (336)
T 4du5_A 185 RSVSFDPNLRPTLWATPELMRDAINDLATRADWVLPGMEEGRFLTG 230 (336)
T ss_dssp CEEEEECCCCGGGSSSHHHHHHHHHHHHTTCSEECCBHHHHHHHHC
T ss_pred CEEEEeCcCCchhcCChHHHHHHHHHHHHhCCEEECCHHHHHHHhC
Confidence 9999999988888988777788889999999999999999999987
No 7
>2qcv_A Putative 5-dehydro-2-deoxygluconokinase; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.90A {Bacillus halodurans c-125}
Probab=100.00 E-value=1.6e-31 Score=228.33 Aligned_cols=205 Identities=26% Similarity=0.421 Sum_probs=176.7
Q ss_pred CccEEEEcceeeeeccCCCCcccccCCCccccCCChHHHHHHHHHHcCCceeEEEeeCCCHHHHHHHHHHHHCCCCccce
Q 025807 28 DRLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGV 107 (248)
Q Consensus 28 ~~~ilviG~~~vD~~~~~~~~p~~~~~~~~~~~GG~a~N~a~ala~lG~~v~l~~~vG~D~~g~~i~~~L~~~gI~~~~v 107 (248)
+++|+++|++++|++......|...+......+||+++|+|.+|++||.++.++|.||+|.+|+.+++.|+++||+++++
T Consensus 11 ~~~i~viG~~~~D~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~G~~l~~~L~~~gV~~~~v 90 (332)
T 2qcv_A 11 EFDLIAIGRACIDLNAVEYNRPMEETMTFSKYVGGSPANIVIGSSKLGLKAGFIGKIADDQHGRFIESYMRGVGVDTSNL 90 (332)
T ss_dssp SEEEEEESCCEEEEEESSCSSCGGGCCCEEEEEESHHHHHHHHHHHTTCCEEEEEEECSSHHHHHHHHHHHHTTCBCTTE
T ss_pred CCcEEEECcceEEEecCCCCCCccccceeEecCCCHHHHHHHHHHHcCCceEEEEEeCCCHHHHHHHHHHHHcCCCCcce
Confidence 47899999999999988766665556677889999999999999999999999999999999999999999999999999
Q ss_pred EEcC-CCCceEEEEEEecCCCceEEEecCCCcccccCcccchHhhhcCccEEEEcccccccchhHHHHHHHHHHHHHCCC
Q 025807 108 RYDS-TARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGS 186 (248)
Q Consensus 108 ~~~~-~~~T~~~~i~i~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~a~~~g~ 186 (248)
.+.+ +.+|+.+++.++.+|++++.+++..+++..++++++....+++++++|++|+.+..+.+.+.+..+++.++++|+
T Consensus 91 ~~~~~~~~t~~~~v~~~~~g~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~a~~~g~ 170 (332)
T 2qcv_A 91 VVDQEGHKTGLAFTEIKSPEECSILMYRQDVADLYLSPEEVNEAYIRRSKLLLVSGTALSKSPSREAVLKAIRLAKRNDV 170 (332)
T ss_dssp EECSSCCCCCEEEEEEEETTEEEEEEECTTCGGGGCCGGGCCHHHHTTEEEEEEEGGGGSSTTHHHHHHHHHHHHHHTTC
T ss_pred EecCCCCCceEEEEEEcCCCCccEEEECCcchhhhCCHhHCCHHHHccCCEEEEeCccccCchhHHHHHHHHHHHHHCCC
Confidence 8765 358999988877778888877654556667777777766788999999999866555566788899999999999
Q ss_pred eEEEeCCCCCCCCCCHHHHHHHHHHhhhhCCEEEeCHHHHHHhHHH
Q 025807 187 ILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVKFETRYSCIQK 232 (248)
Q Consensus 187 ~v~~D~~~~~~~w~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~ 232 (248)
++++||+.+...|.+.+...+.+.++++++|++++|++|++.|+|.
T Consensus 171 ~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~ 216 (332)
T 2qcv_A 171 KVVFELDYRPYSWETPEETAVYYSLVAEQSDIVIGTREEFDVLENR 216 (332)
T ss_dssp EEEEECCCCGGGSSCHHHHHHHHHHHHHHCSEEEEEHHHHHHHTTC
T ss_pred EEEEcCcCchhhcCCHHHHHHHHHHHHHhCCEEEccHHHHHHHhCC
Confidence 9999999887778776667778888999999999999999999863
No 8
>3iq0_A Putative ribokinase II; transferase,kinase,SAD,ribose, D-ribose metabolic process, PFKB family,11206G, PSI-II, NYSGXRC, structural genomics; HET: ATP; 1.79A {Escherichia coli O6} SCOP: c.72.1.0 PDB: 3k9e_A
Probab=100.00 E-value=5.7e-32 Score=231.01 Aligned_cols=203 Identities=25% Similarity=0.354 Sum_probs=169.0
Q ss_pred CccEEEEcceeeeeccCCCCccccc-CCCccccCCChHHHHHHHHHHcCCceeEEEeeCCCHHHHHHHHHHHHCCCCccc
Q 025807 28 DRLVVCFGEMLIDFVPTVGGVSLAE-APAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSG 106 (248)
Q Consensus 28 ~~~ilviG~~~vD~~~~~~~~p~~~-~~~~~~~~GG~a~N~a~ala~lG~~v~l~~~vG~D~~g~~i~~~L~~~gI~~~~ 106 (248)
|++|+|+|++++|++...+...... .......+||+++|+|.+|++||.++.++|.||+|.+|+.+++.|++.||++++
T Consensus 3 m~~i~viG~~~~D~~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~g~~i~~~l~~~gv~~~~ 82 (330)
T 3iq0_A 3 LSKVFTIGEILVEIMASKIGQPFDQPGIWNGPYPSGAPAIFIDQVTRLGVPCGIISCVGNDGFGDINIHRLAADGVDIRG 82 (330)
T ss_dssp -CEEEEESCCEEEEEEEEETCCSSSCEEEEEEEEECHHHHHHHHHHHTTCCEEEEEEEESSHHHHHHHHHHHHTTCBCTT
T ss_pred CCCEEEEcceeEEEeccCCCCCccccccccCcCCCCHHHHHHHHHHHCCCcEEEEEEeCCChHHHHHHHHHHHcCCCeee
Confidence 5679999999999997643322211 112346789999999999999999999999999999999999999999999999
Q ss_pred eEEcCCCCceEEEEEEecCCCceEEEecCCCcccccCcccchHhhhcCccEEEEcccccccchhHHHHHHHHHHHHHCCC
Q 025807 107 VRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGS 186 (248)
Q Consensus 107 v~~~~~~~T~~~~i~i~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~a~~~g~ 186 (248)
+.+.++.+|+++++.++++|+|++.+++..++...++++++....+++++++|++|+...++...+.+.++++.++++|+
T Consensus 83 v~~~~~~~T~~~~i~~~~~g~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~v~~sg~~~~~~~~~~~~~~~~~~a~~~g~ 162 (330)
T 3iq0_A 83 ISVLPLEATGSAFVTYHNSGDRDFIFNIKNAACGKLSAQHVDENILKDCTHFHIMGSSLFSFHMVDAVKKAVTIVKANGG 162 (330)
T ss_dssp EEEETTSCCEEEEEEECC---CEEEEECTTSGGGGCCGGGCCGGGGTTEEEEEEEGGGCSSHHHHHHHHHHHHHHHHTTC
T ss_pred EEEcCCCCceEEEEEECCCCCeeEEEeccCChhhhCCHhhCCHhHhccCCEEEEechhhcCcchHHHHHHHHHHHHHcCC
Confidence 98888889999999998889997666554566667788877777789999999999876666677888999999999999
Q ss_pred eEEEeCCCCCCCCCCHHHHHHHHHHhhhhCCEEEeCHHHHHHhHH
Q 025807 187 ILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVKFETRYSCIQ 231 (248)
Q Consensus 187 ~v~~D~~~~~~~w~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g 231 (248)
++++||+.+...|.+. ..++.+.++++++|++++|++|++.|+|
T Consensus 163 ~v~~D~~~~~~~~~~~-~~~~~~~~~l~~~dil~~N~~E~~~l~g 206 (330)
T 3iq0_A 163 VISFDPNIRKEMLDIP-EMRDALHFVLELTDIYMPSEGEVLLLSP 206 (330)
T ss_dssp EEEEECCCCGGGGGSH-HHHHHHHHHHHTCSEECCBGGGTTTTCS
T ss_pred EEEEcCCCCccccCcH-HHHHHHHHHHhhCCEEecCHHHHHHHhC
Confidence 9999999888778753 3677888999999999999999999876
No 9
>1tyy_A Putative sugar kinase; ribokinase fold, alpha/beta, transferase; 2.60A {Salmonella typhimurium LT2} SCOP: c.72.1.1 PDB: 1tz3_A* 1tz6_A*
Probab=99.98 E-value=7.8e-32 Score=231.02 Aligned_cols=207 Identities=33% Similarity=0.519 Sum_probs=162.0
Q ss_pred CcccccccccCCCCCCCccEEEEcceeeeeccCCCCcccccCCCccccCCChHHHHHHHHHHcCCceeEEEeeCCCHHHH
Q 025807 12 GSKDLSASMDGGSGAYDRLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGY 91 (248)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~ilviG~~~vD~~~~~~~~p~~~~~~~~~~~GG~a~N~a~ala~lG~~v~l~~~vG~D~~g~ 91 (248)
++.+.+..|.+ |++|+|+|++++|++... .......+||+++|+|.+|++||.++.++|.||+|.+|+
T Consensus 13 ~~~~~~~~~~~-----m~~ilviG~~~~D~~~~~-------~~~~~~~~GG~~~NvA~~la~LG~~~~~ig~vG~D~~G~ 80 (339)
T 1tyy_A 13 GLVPRGSHMKA-----MNKVWVIGDASVDLVPEK-------QNSYLKCPGGASANVGVCVARLGGECGFIGCLGDDDAGR 80 (339)
T ss_dssp -----------------CCEEEESCCEEEEEECS-------SSEEEEEEECHHHHHHHHHHHTTCCEEEEEEECSSHHHH
T ss_pred CcCcCcccccc-----cCCEEEECcceeEEeccC-------CCceEEcCCCHHHHHHHHHHHcCCCeEEEEeeCCCHHHH
Confidence 46666666664 568999999999999863 234567899999999999999999999999999999999
Q ss_pred HHHHHHHHCCCCccceEEcCCCCceEEEEEEecCCCceEEEecCCCcccccCcccchHhhhcCccEEEEcccccccchhH
Q 025807 92 MLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCR 171 (248)
Q Consensus 92 ~i~~~L~~~gI~~~~v~~~~~~~T~~~~i~i~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~ 171 (248)
.+++.|++.||+++++.+.++.+|+++++.++++|+|++.+++..+++..++++ ..+.+++++++|++++.+..+.+.
T Consensus 81 ~i~~~L~~~gVd~~~v~~~~~~~T~~~~v~~~~~g~r~~~~~~~~~a~~~l~~~--~~~~l~~~~~v~~~~~~l~~~~~~ 158 (339)
T 1tyy_A 81 FLRQVFQDNGVDVTFLRLDADLTSAVLIVNLTADGERSFTYLVHPGADTYVSPQ--DLPPFRQYEWFYFSSIGLTDRPAR 158 (339)
T ss_dssp HHHHHHHTTTEECTTEEECTTSCCCEEEEC-------CEEECCSSCGGGGCCGG--GCCCCCTTCEEEEEHHHHSSHHHH
T ss_pred HHHHHHHHcCCCchheEecCCCCCeEEEEEEcCCCCeEEEEecCCChhhhCCcc--hhhHhccCCEEEEcchhhcCcccH
Confidence 999999999999999988777899999988888899988776545666666554 234568899999998766666677
Q ss_pred HHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHhhhhCCEEEeCHHHHHHhHHH
Q 025807 172 STQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVKFETRYSCIQK 232 (248)
Q Consensus 172 ~~~~~~~~~a~~~g~~v~~D~~~~~~~w~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~ 232 (248)
+.+..+++.++++|+++++||+.+..+|.+.+.+++.+.++++++|++++|++|+..|+|.
T Consensus 159 ~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~Ea~~l~g~ 219 (339)
T 1tyy_A 159 EACLEGARRMREAGGYVLFDVNLRSKMWGNTDEIPELIARSAALASICKVSADELCQLSGA 219 (339)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCCCGGGCSCGGGHHHHHHHHHHHCSEEEEEHHHHHHHHCC
T ss_pred HHHHHHHHHHHHcCCEEEEeCCCCccccCCHHHHHHHHHHHHhhCCEEecCHHHHHHHhCC
Confidence 8889999999999999999999888778755556777888999999999999999999874
No 10
>3ewm_A Uncharacterized sugar kinase PH1459; carbohydrate kinase, PFKB family, PSI-II, NYSGXRC, structural genomics, protein structure initiative; 1.90A {Pyrococcus horikoshii} PDB: 3ih0_A* 3gbu_A*
Probab=99.98 E-value=5.1e-31 Score=223.51 Aligned_cols=201 Identities=34% Similarity=0.588 Sum_probs=172.6
Q ss_pred CccEEEEcceeeeeccCCCCcccccCCCccccCCChHHHHHHHHHHcCCceeEEEeeCCCHHHHHHHHHHHHCCCCccce
Q 025807 28 DRLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGV 107 (248)
Q Consensus 28 ~~~ilviG~~~vD~~~~~~~~p~~~~~~~~~~~GG~a~N~a~ala~lG~~v~l~~~vG~D~~g~~i~~~L~~~gI~~~~v 107 (248)
|++|+|+|++++|++...++ +...+......+||+++|+|.+|++||.++.++|.||+|.+|+.+++.|++.||+++++
T Consensus 1 M~~v~viG~~~iD~~~~~~g-~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~ig~vG~D~~g~~i~~~l~~~gv~~~~v 79 (313)
T 3ewm_A 1 MSLIASIGELLIDLISVEEG-DLKDVRLFEKHPGGAPANVAVGVSRLGVKSSLISKVGNDPFGEYLIEELSKENVDTRGI 79 (313)
T ss_dssp -CEEEEESCCEEEEEESSSS-CTTTCCEEEEEEECHHHHHHHHHHHTTCEEEEEEEEESSHHHHHHHHHHHHTTCBCTTE
T ss_pred CCcEEEECceeeeeecCCCC-CcccccceeecCCCHHHHHHHHHHHCCCCeEEEEEeCCCHHHHHHHHHHHHcCCCccce
Confidence 56799999999999987543 23356677899999999999999999999999999999999999999999999999999
Q ss_pred EEcCCCCceEEEEEEecCCCceEEEecCCCcccccCcccchHhhhcCccEEEEcccccccchhHHHHHHHHHHHHHCCCe
Q 025807 108 RYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSI 187 (248)
Q Consensus 108 ~~~~~~~T~~~~i~i~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~a~~~g~~ 187 (248)
.+.++.+|+++++.++. |+|+++.+. ..++..+++++++.+.+++++++|++++.+..+.+.+.+..+++.++ ++++
T Consensus 80 ~~~~~~~T~~~~~~~~~-g~~~~~~~~-~~a~~~l~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~-~~~~ 156 (313)
T 3ewm_A 80 VKDEKKHTGIVFVQLKG-ASPSFLLYD-DVAYFNMTLNDINWDIVEEAKIVNFGSVILARNPSRETVMKVIKKIK-GSSL 156 (313)
T ss_dssp EEESSSCCEEEEEECSS-SSCEEEECC-SSGGGCCCGGGCCHHHHHHCSEEEEESGGGGSTTHHHHHHHHHHHHB-TTBE
T ss_pred eecCCCCceEEEEEecC-CCcceEeec-cCHHHhCChhhCCHHHhCCCCEEEEcCcccCCcchHHHHHHHHHHhc-cCCE
Confidence 87788899999988774 999988862 33556678887777778899999999987666677788899999988 5799
Q ss_pred EEEeCCCCCCCCC-CHHHHHHHHHHhhhhCCEEEeCHHHHHHhHHH
Q 025807 188 LSYDPNLRLPLWP-SEEAAREGIMSIWDQADIIKVKFETRYSCIQK 232 (248)
Q Consensus 188 v~~D~~~~~~~w~-~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~ 232 (248)
+++||+.+...|. +.+.+.+.+.++++++|++++|++|++.|++.
T Consensus 157 v~~Dp~~~~~~~~~~~~~~~~~~~~~l~~~di~~~N~~E~~~l~~~ 202 (313)
T 3ewm_A 157 IAFDVNLRLDLWRGQEEEMIKVLEESIKLADIVKASEEEVLYLENQ 202 (313)
T ss_dssp EEEECCCCGGGGTTCHHHHHHHHHHHHHHCSEEEEEHHHHHHHHTT
T ss_pred EEEeCCCChHHcCCCHHHHHHHHHHHHhhCCEEecCHHHHHHHhcc
Confidence 9999998887787 45666788899999999999999999988764
No 11
>3ktn_A Carbohydrate kinase, PFKB family; PFKB family,ribokianse,2-keto-3-deoxygluconate kinase,PSI-II, NYSGXRC,, structural genomics; 2.26A {Enterococcus faecalis}
Probab=99.98 E-value=6.1e-31 Score=225.94 Aligned_cols=203 Identities=18% Similarity=0.198 Sum_probs=170.2
Q ss_pred CccEEEEcceeeeeccCCCCcccccCCCccccCCChHHHHHHHHHHcCCceeEEEeeCCCHHHHHHHHHHHHCCCCccce
Q 025807 28 DRLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGV 107 (248)
Q Consensus 28 ~~~ilviG~~~vD~~~~~~~~p~~~~~~~~~~~GG~a~N~a~ala~lG~~v~l~~~vG~D~~g~~i~~~L~~~gI~~~~v 107 (248)
|++|+|+|++++|+++..+ .+...+......+||+++|+|.+|++||.++.++|.||+|.+|+.+++.|++.||+++++
T Consensus 2 ~~~v~viG~~~~D~~~~~~-~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~g~~i~~~l~~~gv~~~~v 80 (346)
T 3ktn_A 2 SLKIAAFGEVMLRFTPPEY-LMLEQTEQLRMNFVGTGVNLLANLAHFQLETALITKLPANRLGEAGKAALRKLGISDQWV 80 (346)
T ss_dssp CCEEEEECCCEEEEECSTT-CCTTTCSCCEEEEECHHHHHHHHHHHTTCEEEEEEEECSSHHHHHHHHHHHHTTCBCTTE
T ss_pred CCcEEEeChhhhhhcCCCC-CcccccceeEEeccCHHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHcCCcceEE
Confidence 5679999999999996432 233356778899999999999999999999999999999999999999999999999999
Q ss_pred EEcCCCCceEEEEEEecCCCceEEEe--cCCCcccccCcccch-HhhhcCccEEEEccccc-ccchhHHHHHHHHHHHHH
Q 025807 108 RYDSTARTALAFVTLRADGEREFLFF--RHPSADMLLCESELD-KNLIKQGSIFHYGSISL-IAEPCRSTQLAAMNLAKE 183 (248)
Q Consensus 108 ~~~~~~~T~~~~i~i~~~g~r~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~v~~~g~~~-~~~~~~~~~~~~~~~a~~ 183 (248)
.+. +.+|+++++.++.+++++++.+ +..++...+++++++ .+.++++|++|++|+.+ .++...+.+.++++.+++
T Consensus 81 ~~~-~~~t~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~ 159 (346)
T 3ktn_A 81 GEK-GDHIGSFFAEMGYGIRPTQVTYQNRHQSAFGISEAKDYDFEAFLAEVDMVHICGISLSLTEKTRDAALILAQKAHA 159 (346)
T ss_dssp EEC-CSCCEEEEEECCBTTBCCEEEECCCTTSTTTTCCGGGSCHHHHHTTCSEEEECTHHHHHCHHHHHHHHHHHHHHHH
T ss_pred EeC-CCceEEEEEEecCCCCCceEEecCCCCChhhhCChhhcChHHHhCCCCEEEEeCccccCCHHHHHHHHHHHHHHHH
Confidence 774 5699999988776566666554 445666677887776 45789999999999864 345556888999999999
Q ss_pred CCCeEEEeCCCCCCCCCCH--HHHHHHHHHhhhhCCEEEeCHHHHHHhHHH
Q 025807 184 SGSILSYDPNLRLPLWPSE--EAAREGIMSIWDQADIIKVKFETRYSCIQK 232 (248)
Q Consensus 184 ~g~~v~~D~~~~~~~w~~~--~~~~~~~~~~l~~~dil~~N~~E~~~l~g~ 232 (248)
+|+++++||+.+..+|.+. +..++.+.++++++|++++|++|++.|+|.
T Consensus 160 ~g~~v~~D~~~r~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~ 210 (346)
T 3ktn_A 160 YQKKVCFDFNYRPSLNTANSALFMRQQYERILPYCDIVFGSRRDLVELLGF 210 (346)
T ss_dssp TTCEEEEECCCCGGGCCHHHHHHHHHHHHHHGGGCSEEECCHHHHHHTSCC
T ss_pred cCCEEEEeCCCChHHcCCccHHHHHHHHHHHHHhCCEEEccHHHHHHHhCC
Confidence 9999999999888888753 556788999999999999999999998763
No 12
>4e69_A 2-dehydro-3-deoxygluconokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Oceanicola granulosus} PDB: 4ebu_A* 4eum_A*
Probab=99.98 E-value=5.7e-31 Score=224.67 Aligned_cols=215 Identities=23% Similarity=0.383 Sum_probs=175.5
Q ss_pred CCCCCCCCcccccccccCCCCCCCccEEEEcceeeeeccCCCCcccccCCCccccCCChHHHHHHHHHHc--CCceeEEE
Q 025807 5 HNPTSGAGSKDLSASMDGGSGAYDRLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRL--GGSSAFVG 82 (248)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~ilviG~~~vD~~~~~~~~p~~~~~~~~~~~GG~a~N~a~ala~l--G~~v~l~~ 82 (248)
|.-.|+..+.=..=.|+. |++|+|+|++++|++.... ...+...+||+++|+|.+|++| |.++.++|
T Consensus 5 ~~~~~~~~~~~~~y~~~~-----m~~i~viG~~~iD~~~~~~------~~~~~~~~GG~~~NvA~~la~Lg~G~~~~~ig 73 (328)
T 4e69_A 5 HHHSSGVDLGTENLYFQS-----MMHILSIGECMAELAPADL------PGTYRLGFAGDTFNTAWYLARLRPESRISYFS 73 (328)
T ss_dssp -----CCCCCCBCSSCBS-----SCEEEEESCCEEEEEECSS------TTEEEEEEECHHHHHHHHHHHHCTTSEEEEEC
T ss_pred cccccccccCcccccccc-----CCcEEEecCcEEEEecCCC------CCceEEecCCHHHHHHHHHHhcCCCCcEEEEE
Confidence 333455555444444554 7889999999999998621 1456789999999999999999 89999999
Q ss_pred eeCCCHHHHHHHHHHHHCCCCccceEEcCCCCceEEEEEEecCCCceEEEecCCCccc-ccCcccchHhhhcCccEEEEc
Q 025807 83 KLGDDEFGYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADM-LLCESELDKNLIKQGSIFHYG 161 (248)
Q Consensus 83 ~vG~D~~g~~i~~~L~~~gI~~~~v~~~~~~~T~~~~i~i~~~g~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~~~ 161 (248)
.||+|.+|+.+++.|++.||+++++.+.++.+|+.+++.++ +|+|++++++...+.. .++..++..+.++++|++|++
T Consensus 74 ~vG~D~~G~~l~~~L~~~GV~~~~v~~~~~~~T~~~~v~~~-~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 152 (328)
T 4e69_A 74 AIGDDALSQQMRAAMSAAGIDGGGLRVIPGRTVGLYLITLE-QGERSFAYWRGQSAARELAGDADALAAAMARADVVYFS 152 (328)
T ss_dssp EECSSHHHHHHHHHHHHTTEECTTCEECTTCCCEEEEEEEE-TTEEEEEEECTTCGGGGTTSCHHHHHHHHTTCSEEEEE
T ss_pred eeCCCHHHHHHHHHHHHcCCccceEEEcCCCCCeEEEEEec-CCceEEEEeCCCCHHHhhcCccccchHHhcCCCEEEEC
Confidence 99999999999999999999999998877779999999999 9999998875433322 233444444678999999999
Q ss_pred cccc--ccchhHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHhhhhCCEEEeCHHHHHHhHH
Q 025807 162 SISL--IAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVKFETRYSCIQ 231 (248)
Q Consensus 162 g~~~--~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~w~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g 231 (248)
++.+ .++.+.+.+.++++.++++|+++++||+.++..|.+.+..++.+.++++++|++++|+.|++.|+|
T Consensus 153 g~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g 224 (328)
T 4e69_A 153 GITLAILDQCGRATLLRALAQARATGRTIAFDPNLRPRLWAGTGEMTETIMQGAAVSDIALPSFEDEAAWFG 224 (328)
T ss_dssp HHHHHTSCHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGCSCHHHHHHHHHHHHTTCSEECCBHHHHHHHHT
T ss_pred CchhhccCchHHHHHHHHHHHHHhCCCEEEEeCCCChhhcCCHHHHHHHHHHHHHhCCEEeCCHHHHHHHcC
Confidence 8753 346677888999999999999999999988878988777888899999999999999999999987
No 13
>4e3a_A Sugar kinase protein; structural genomics, protein structure initiative, nysgrc, S kinase, PSI-biology; HET: ADN; 1.63A {Rhizobium etli} PDB: 3ubo_A*
Probab=99.97 E-value=6.7e-31 Score=226.29 Aligned_cols=199 Identities=18% Similarity=0.297 Sum_probs=170.6
Q ss_pred CccEEEEcceeeeeccCCCCc-------cccc---------------CCCccccCCChHHHHHHHHHHcCCceeEEEeeC
Q 025807 28 DRLVVCFGEMLIDFVPTVGGV-------SLAE---------------APAFKKAPGGAPANVAVGISRLGGSSAFVGKLG 85 (248)
Q Consensus 28 ~~~ilviG~~~vD~~~~~~~~-------p~~~---------------~~~~~~~~GG~a~N~a~ala~lG~~v~l~~~vG 85 (248)
+++|+++|++++|++..++.. |... .......+||+++|+|.+|++||.++.++|.||
T Consensus 25 ~~~v~~iG~~~vD~~~~v~~~~l~~~~l~~g~~~li~~~~~~~l~~~~~~~~~~~GG~~~N~A~~la~LG~~~~~ig~vG 104 (352)
T 4e3a_A 25 RFDVLTVGNAIVDIISRCNDQFLIDNQITKAAMNLIDAERAELLYSRMGPALEASGGSAGNTAAGVANLGGKAAYFGNVA 104 (352)
T ss_dssp SEEEEEECCCEEEEEEECCHHHHHHTTCCTTSEEECCHHHHHHHHHHSCSCEEEECCHHHHHHHHHHHHTCCEEEECCCC
T ss_pred cccEEEECCceeeEEEecCHHHHHHcCCCCCcceEeCHHHHHHHHHHhhhccEecCCHHHHHHHHHHHcCCCeEEEEEEC
Confidence 488999999999999988762 2110 012357899999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHCCCCccceEEcCCCCceEEEEEEecCCCceEEEecCCCcccccCcccchHhhhcCccEEEEccccc
Q 025807 86 DDEFGYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISL 165 (248)
Q Consensus 86 ~D~~g~~i~~~L~~~gI~~~~v~~~~~~~T~~~~i~i~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~ 165 (248)
+|.+|+.+++.|++.||+++++.+.++.+|+.++++++++|+|++..+ .++...++++++..+.+++++++|++|+.+
T Consensus 105 ~D~~G~~l~~~l~~~GV~~~~~~~~~~~~T~~~~v~v~~~g~r~~~~~--~ga~~~l~~~~~~~~~~~~~~~v~~~G~~~ 182 (352)
T 4e3a_A 105 ADQLGDIFTHDIRAQGVHYQTKPKGAFPPTARSMIFVTEDGERSMNTY--LGACVELGPEDVEADVVADAKVTYFEGYLW 182 (352)
T ss_dssp SSHHHHHHHHHHHHTTCEECCCCCCSSSCCEEEEEEECTTSCEEEEEE--CGGGGGCCGGGCCHHHHHTEEEEEEEGGGG
T ss_pred CChHHHHHHHHHHHcCCccceeeccCCCCCeEEEEEEcCCCceEEEec--cChhhcCChhhCCHHHHhhCCEEEEeeeec
Confidence 999999999999999999999977777799999999999999999877 567777888888878889999999999876
Q ss_pred ccchhHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHhhh--hCCEEEeCHHHHHHhHHH
Q 025807 166 IAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWD--QADIIKVKFETRYSCIQK 232 (248)
Q Consensus 166 ~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~w~~~~~~~~~~~~~l~--~~dil~~N~~E~~~l~g~ 232 (248)
.++.+.+.+..+++.++++|+++++|++.. | ..+.+++.+.++++ ++|++++|++|++.|+|.
T Consensus 183 ~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~---~-~~~~~~~~l~~ll~~~~~dil~~N~~Ea~~l~g~ 247 (352)
T 4e3a_A 183 DPPRAKEAILDCARIAHQHGREMSMTLSDS---F-CVDRYRGEFLDLMRSGKVDIVFANRQEALSLYQT 247 (352)
T ss_dssp SSSSHHHHHHHHHHHHHHTTCEEEEECCCH---H-HHHHHHHHHHHHHHTTSCCEEEEEHHHHHHHTTC
T ss_pred CCchHHHHHHHHHHHHHHcCCEEEEECCch---h-hHHHHHHHHHHHhcccCCcEEEeCHHHHHHHhCC
Confidence 667788899999999999999999999742 1 12445777888999 999999999999999873
No 14
>2v78_A Fructokinase; transferase, PFKB family carbohydrate kinase, 2- keto-3-deoxygluconate kinase; 2.00A {Sulfolobus solfataricus} PDB: 2var_A*
Probab=99.97 E-value=1.1e-30 Score=221.37 Aligned_cols=199 Identities=26% Similarity=0.433 Sum_probs=168.1
Q ss_pred CccEEEEcceeeeeccCCCCcccccCCCccccCCChHHHHHHHHHHcCCceeEEEeeCCCHHHHHHHHHHHHCCCCccce
Q 025807 28 DRLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGV 107 (248)
Q Consensus 28 ~~~ilviG~~~vD~~~~~~~~p~~~~~~~~~~~GG~a~N~a~ala~lG~~v~l~~~vG~D~~g~~i~~~L~~~gI~~~~v 107 (248)
||+|+++|++++|++...++ +...+......+||+++|+|.+|++||.++.++|.||+|.+|+.+++.|++.||+++++
T Consensus 1 m~~v~viG~~~~D~~~~~~~-~~~~~~~~~~~~GG~~~N~A~~la~LG~~~~~i~~vG~D~~g~~~~~~l~~~gv~~~~v 79 (313)
T 2v78_A 1 MVDVIALGEPLIQFNSFNPG-PLRFVNYFEKHVAGSELNFCIAVVRNHLSCSLIARVGNDEFGKNIIEYSRAQGIDTSHI 79 (313)
T ss_dssp -CCEEEECCCEEEEEESSSS-CGGGCCEEEEEEECHHHHHHHHHHHTTCCEEEEEEEESSHHHHHHHHHHHHTTCBCTTE
T ss_pred CCeEEEECcceEEEecCCCC-cccccceeEecCCChHHHHHHHHHHCCCcEEEEEEeCCCHHHHHHHHHHHHcCCcCceE
Confidence 45799999999999975432 33345667889999999999999999999999999999999999999999999999999
Q ss_pred EEcCCCCceEEEEE--EecCCCceEEEecCCCcccccCcccchHhhhcCccEEEEcccccc-cchhHHHHHHHHHHHHHC
Q 025807 108 RYDSTARTALAFVT--LRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLI-AEPCRSTQLAAMNLAKES 184 (248)
Q Consensus 108 ~~~~~~~T~~~~i~--i~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~-~~~~~~~~~~~~~~a~~~ 184 (248)
.+.++.+|+++++. ++++|+|++.+++..++...++++++....+++++++|++++... ++.+.+.+..+++.++++
T Consensus 80 ~~~~~~~t~~~~~~~~~~~~g~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~ 159 (313)
T 2v78_A 80 KVDNESFTGIYFIQRGYPIPMKSELVYYRKGSAGSRLSPEDINENYVRNSRLVHSTGITLAISDNAKEAVIKAFELAKSR 159 (313)
T ss_dssp EEETTSCCCEEEEEESSSSTTCEEEEEECTTCSGGGCCGGGCCHHHHHTSSEEEEEHHHHHHCHHHHHHHHHHHHHCSSE
T ss_pred EEcCCCCceEEEEEEecCCCCCeeEEEeCCcChhHhCChhhCCHHHhcCCCEEEEcCchhhcChHHHHHHHHHHHHHHHh
Confidence 88777799999998 887899988877655677778888777667889999999987542 455667777888877654
Q ss_pred CCeEEEeCCCCCCCCCCHHHHHHHHHHhhhhCC--EEEeCHHHHHHhHH
Q 025807 185 GSILSYDPNLRLPLWPSEEAAREGIMSIWDQAD--IIKVKFETRYSCIQ 231 (248)
Q Consensus 185 g~~v~~D~~~~~~~w~~~~~~~~~~~~~l~~~d--il~~N~~E~~~l~g 231 (248)
++||+.+...|.+.+.+++.+.++++++| ++++|++|++.|+|
T Consensus 160 ----~~D~~~~~~~~~~~~~~~~~~~~~l~~~d~~il~~N~~E~~~l~g 204 (313)
T 2v78_A 160 ----SLDTNIRPKLWSSLEKAKETILSILKKYDIEVLITDPDDTKILLD 204 (313)
T ss_dssp ----EEECCCCGGGSSCHHHHHHHHHHHHHHSCEEEEEECHHHHHHHHS
T ss_pred ----CcCCcCChhhcCCHHHHHHHHHHHHHhcCeeEEECcHHHHHHHhC
Confidence 89999888888776677788889999999 99999999999986
No 15
>3lhx_A Ketodeoxygluconokinase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.87A {Shigella flexneri}
Probab=99.97 E-value=1.2e-30 Score=221.84 Aligned_cols=195 Identities=22% Similarity=0.347 Sum_probs=163.6
Q ss_pred ccEEEEcceeeeeccCCCCcccccCCCccccCCChHHHHHHHHHHcC----CceeEEEeeCCCHHHHHHHHHHHHCCCCc
Q 025807 29 RLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLG----GSSAFVGKLGDDEFGYMLANILKENNVDT 104 (248)
Q Consensus 29 ~~ilviG~~~vD~~~~~~~~p~~~~~~~~~~~GG~a~N~a~ala~lG----~~v~l~~~vG~D~~g~~i~~~L~~~gI~~ 104 (248)
++|+|+|++++|++... ..+...+||+++|+|.+|++|| .++.++|.||+|.+|+.+++.|+++||++
T Consensus 5 ~~i~viG~~~~D~~~~~--------~~~~~~~GG~~~NvA~~la~LG~~~~~~~~~ig~vG~D~~G~~l~~~L~~~GV~~ 76 (319)
T 3lhx_A 5 KKIAVIGECMIELSEKG--------ADVKRGFGGDTLNTSVYIARQVDPAALTVHYVTALGTDSFSQQMLDAWHGENVDT 76 (319)
T ss_dssp EEEEEESCCEEEEEC-----------CCEEEEECHHHHHHHHHHTTSCTTTEEEEEECEECSSHHHHHHHHHHHTTTEEC
T ss_pred CceeeechhhhhhccCC--------CceEEecCChHHHHHHHHHHcCCCCCCcEEEEEEeCCCHHHHHHHHHHHHcCCCc
Confidence 57999999999998764 2457899999999999999999 89999999999999999999999999999
Q ss_pred cceEEcCCCCceEEEEEEecCCCceEEEecCCC-cccccCcccch--HhhhcCccEEEEccccc--ccchhHHHHHHHHH
Q 025807 105 SGVRYDSTARTALAFVTLRADGEREFLFFRHPS-ADMLLCESELD--KNLIKQGSIFHYGSISL--IAEPCRSTQLAAMN 179 (248)
Q Consensus 105 ~~v~~~~~~~T~~~~i~i~~~g~r~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~v~~~g~~~--~~~~~~~~~~~~~~ 179 (248)
+++.+.++.+|+.+++.++++|+|++++++... ++..++++.+. .+.++++|++|++|+.+ .++.+.+.+.++++
T Consensus 77 ~~v~~~~~~~T~~~~i~~~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~g~~~~~l~~~~~~~~~~~~~ 156 (319)
T 3lhx_A 77 SLTQRMENRLPGLYYIETDSTGERTFYYWRNEAAAKFWLASEQSAAICEELANFDYLYLSGISLAILSPTSREKLLSLLR 156 (319)
T ss_dssp TTCEECTTCCCCEEEEEC----CCEEEEECTTCGGGGTTSSSSHHHHHHHHTTCSEEEEEHHHHHTSCHHHHHHHHHHHH
T ss_pred ceEEEcCCCCceEEEEEeCCCCCeeEEEecCCCHHHhccCccchhhHHHHhcCCCEEEEcCchhhhcCchhHHHHHHHHH
Confidence 999888778999999999889999998875432 33345554443 24688999999998754 35566788899999
Q ss_pred HHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHhhhhCCEEEeCHHHHHHhHH
Q 025807 180 LAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVKFETRYSCIQ 231 (248)
Q Consensus 180 ~a~~~g~~v~~D~~~~~~~w~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g 231 (248)
.++++|+++++||+.+...|.+.+..++.+.++++++|++++|+.|++.|+|
T Consensus 157 ~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~di~~~n~~E~~~l~g 208 (319)
T 3lhx_A 157 ECRAKGGKVIFDNNYRPRLWASKEETQQVYQQMLECTDIAFLTLDDEDALWG 208 (319)
T ss_dssp HHHHTTCEEEEECCCCGGGSSCHHHHHHHHHHHHTTCSEEEEEHHHHHHHHC
T ss_pred HHHhcCCEEEEeCcCCcccccCHHHHHHHHHHHHhhCCcccCCHHHHHHHhC
Confidence 9999999999999988888988888888899999999999999999999987
No 16
>3go6_A Ribokinase RBSK; phosphofructokinase, carbohydrate kinase, transferase; HET: RIB ADP; 1.98A {Mycobacterium tuberculosis} PDB: 3go7_A*
Probab=99.97 E-value=6.1e-30 Score=216.67 Aligned_cols=188 Identities=20% Similarity=0.242 Sum_probs=160.3
Q ss_pred CCccEEEEcceeeeeccCCCCcccc----cCCCccccCCChHHHHHHHHHHcCCceeEEEeeCCCHHHHHHHHHHHHCCC
Q 025807 27 YDRLVVCFGEMLIDFVPTVGGVSLA----EAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNV 102 (248)
Q Consensus 27 ~~~~ilviG~~~vD~~~~~~~~p~~----~~~~~~~~~GG~a~N~a~ala~lG~~v~l~~~vG~D~~g~~i~~~L~~~gI 102 (248)
+|++|+|+|++++|++..++++|.+ .+......+||+++|+|.+|++||.++.++|.+|+|.+|+.+++.|++.||
T Consensus 18 mm~~i~viG~~~iD~~~~v~~~p~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~g~~i~~~L~~~gV 97 (310)
T 3go6_A 18 MAPRVCVVGSVNMDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAAARAGAQVQFSGAFGDDPAAAQLRAHLRANAV 97 (310)
T ss_dssp -CCEEEEECCCEEEEEEECSSCCCTTCCCCCSEEEEEEECHHHHHHHHHHHTTCEEEEECEECSSHHHHHHHHHHHHTTC
T ss_pred ccCCEEEECCceEEEEEecCCCCCCCCeEEecceeecCCCHHHHHHHHHHHCCCCeEEEEEECCCHHHHHHHHHHHHcCC
Confidence 5678999999999999998887754 345678899999999999999999999999999999999999999999999
Q ss_pred CccceEEcCCCCceEEEEEEecCCCceEEEecCCCcccccCcccchHhhhcCccEEEEcccccccchhHHHHHHHHHHHH
Q 025807 103 DTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAK 182 (248)
Q Consensus 103 ~~~~v~~~~~~~T~~~~i~i~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~a~ 182 (248)
+++++... +.+|+.++++++++|+|+++.+ .+++..++ ++ .+.++++|++|+++. .+.+.+..+++.++
T Consensus 98 ~~~~v~~~-~~~T~~~~~~~~~~g~~~~~~~--~ga~~~l~--~~-~~~l~~~~~v~~~~~-----~~~~~~~~~~~~a~ 166 (310)
T 3go6_A 98 GLDRTVTV-PGPSGTAIIVVDASAENTVLVA--PGANAHLT--PV-PSAVANCDVLLTQLE-----IPVATALAAARAAQ 166 (310)
T ss_dssp BCTTCEEC-SSCCEEEEEEECTTSCEEEEEE--CGGGGGCC--CC-TTTTTTCSEEEECSS-----SCHHHHHHHHHHHH
T ss_pred ccceeEec-CCCCCEEEEEEcCCCCEEEEec--CChhhhHH--HH-HHHhhcCCEEEECCC-----CCHHHHHHHHHHHH
Confidence 99999654 5699999999998999998887 45555555 34 456789999999863 35677889999999
Q ss_pred HCCCeEEEeCCCCCCCCCCHHHHHHHHHHhhhhCCEEEeCHHHHHHhHHH
Q 025807 183 ESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVKFETRYSCIQK 232 (248)
Q Consensus 183 ~~g~~v~~D~~~~~~~w~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~ 232 (248)
++|+++++|++++.. .++.+.++++++|++++|++|++.|++.
T Consensus 167 ~~g~~v~~D~~~~~~-------~~~~~~~ll~~~dil~~N~~Ea~~l~g~ 209 (310)
T 3go6_A 167 SADAVVMVNASPAGQ-------DRSSLQDLAAIADVVIANEHEANDWPSP 209 (310)
T ss_dssp HTTCEEEEECCSSSC-------CHHHHHHHHHHCSEEEEEHHHHHHSSSC
T ss_pred HcCCEEEEcCCcccc-------chHHHHHHHhhCCEEEeCHHHHHHHhCC
Confidence 999999999986543 2556778999999999999999998763
No 17
>3vas_A Putative adenosine kinase; ribokinase, enzyme, transferase; HET: ADN; 2.26A {Schistosoma mansoni} PDB: 4dc3_A* 3vaq_A* 3uq6_A* 3uq9_A*
Probab=99.97 E-value=3.6e-30 Score=223.13 Aligned_cols=196 Identities=13% Similarity=0.181 Sum_probs=166.3
Q ss_pred CccEEEEcceeeeeccCCCC--------------------cccc----cCCCccccCCChHHHHHHHHHHc---CCceeE
Q 025807 28 DRLVVCFGEMLIDFVPTVGG--------------------VSLA----EAPAFKKAPGGAPANVAVGISRL---GGSSAF 80 (248)
Q Consensus 28 ~~~ilviG~~~vD~~~~~~~--------------------~p~~----~~~~~~~~~GG~a~N~a~ala~l---G~~v~l 80 (248)
+.+|+++|++++|++..++. +|.. .+......+||+++|+|.+|++| |.++.+
T Consensus 24 ~~~v~~iG~~~vD~~~~v~~~~l~~~~l~~g~~~l~~~~~~P~~ge~~~~~~~~~~~GG~~~N~A~~la~L~~~G~~~~~ 103 (370)
T 3vas_A 24 EGYVFGMGNPLLDIIVDADDFMYRKYNLKKDNIVLAEEKHMTIYDEIQKKKKLNYIAGGATLNTVKMIQWIIQKPFVCSY 103 (370)
T ss_dssp TTCEEEEECCEEEEEEECCTHHHHHTTCCTTEEEECCGGGTHHHHHHTTSSSCEEEEECHHHHHHHHHHHHHCCTTCEEE
T ss_pred CccEEEECCcceeEEEecCHHHHHHcCCCCCceEEccHHHHHHHHHHhhcCCeEEecCCHHHHHHHHHHHhcCCCCcEEE
Confidence 36799999999999999884 4432 45677889999999999999999 999999
Q ss_pred EEeeCCCHHHHHHHHHHHHCCCCccceEEcCCCCceEEEEEEecCCCceEEEecCCCcccccCcccchH----hhhcCcc
Q 025807 81 VGKLGDDEFGYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDK----NLIKQGS 156 (248)
Q Consensus 81 ~~~vG~D~~g~~i~~~L~~~gI~~~~v~~~~~~~T~~~~i~i~~~g~r~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 156 (248)
+|.||+|.+|+.+++.|++.||+++++.+.++.+|++++++++ +|+|+++.+ .+++..+++++++. +.+++++
T Consensus 104 ig~vG~D~~G~~~~~~L~~~GV~~~~~~~~~~~~Tg~~~i~v~-~g~rt~~~~--~ga~~~l~~~~~~~~~~~~~~~~~~ 180 (370)
T 3vas_A 104 VGCIGADIQGKYIKNDCSALDLVTEFQIAEEPLMTGKVAVLVS-EKLRSMVTY--LGAACDLSLAHIEQPHVWSLVEKAQ 180 (370)
T ss_dssp EEEECSSHHHHHHHHHHHHTTCEECCEECCTTCCEEEEEEEEC-SSCEEEEEE--EEGGGGCCHHHHTSHHHHHHHHHCS
T ss_pred EEEEcCChhHHHHHHHHHHcCCcccccccCCCCCceEEEEEEe-CCceeEEEc--cchhhhCCHHHcCchhhHHHHhhCC
Confidence 9999999999999999999999999987656779999999998 899999876 56677777776653 4678999
Q ss_pred EEEEcccccccchhHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHhhhhCCEEEeCHHHHHHhHHH
Q 025807 157 IFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVKFETRYSCIQK 232 (248)
Q Consensus 157 ~v~~~g~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~w~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~ 232 (248)
++|++|+.+. .+.+.+..+++.++++|+++++|++.. .| .+..++.+.++++++|++++|++|++.|++.
T Consensus 181 ~v~~~g~~~~--~~~~~~~~~~~~a~~~g~~v~ld~~~~--~~--~~~~~~~l~~ll~~~dil~~N~~Ea~~l~g~ 250 (370)
T 3vas_A 181 VYYIAGFVIN--TCYEGMLKIAKHSLENEKLFCFNLSAP--FL--SQFNTKEVDEMISYSNIVFGNESEAEAYGEV 250 (370)
T ss_dssp EEEEEGGGHH--HHHHHHHHHHHHHHHTTCEEEEECCCH--HH--HHHCHHHHHHHHTTCSEEEEEHHHHHHHHHH
T ss_pred EEEEEeeecc--CCHHHHHHHHHHHHHcCCEEEEECCcH--HH--HHHHHHHHHHHHhhCCEEEcCHHHHHHHhcc
Confidence 9999997543 466888999999999999999999631 12 1334677889999999999999999999985
No 18
>2dcn_A Hypothetical fructokinase; 2-keto-3-deoxygluconate kinase, 2-keto- gluconate, transferase; HET: CKP ADP; 2.25A {Sulfolobus tokodaii} SCOP: c.72.1.1 PDB: 1wye_A*
Probab=99.97 E-value=6.1e-30 Score=216.59 Aligned_cols=199 Identities=27% Similarity=0.483 Sum_probs=167.0
Q ss_pred CccEEEEcceeeeeccCCCCcccccCCCccccCCChHHHHHHHHHHcCCceeEEEeeCCCHHHHHHHHHHHHCCCCccce
Q 025807 28 DRLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGV 107 (248)
Q Consensus 28 ~~~ilviG~~~vD~~~~~~~~p~~~~~~~~~~~GG~a~N~a~ala~lG~~v~l~~~vG~D~~g~~i~~~L~~~gI~~~~v 107 (248)
|++|+|+|++++|++...++ +...+......+||+++|+|.+|++||.++.++|.+|+|.+|+.+++.|+++||+++++
T Consensus 1 m~~v~viG~~~~D~~~~~~~-~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~~~~vG~D~~g~~i~~~l~~~gv~~~~v 79 (311)
T 2dcn_A 1 MAKLITLGEILIEFNALSPG-PLRHVSYFEKHVAGSEANYCVAFIKQGNECGIIAKVGDDEFGYNAIEWLRGQGVDVSHM 79 (311)
T ss_dssp -CEEEEESCCEEEEEESSSS-CGGGCCEEEEEEECHHHHHHHHHHHTTCEEEEECEEESSHHHHHHHHHHHHTTCBCTTC
T ss_pred CCCEEEECCceEEEecCCCC-cccccceeeecCCChHHHHHHHHHHCCCceEEEEEeCCCHHHHHHHHHHHHcCCCcceE
Confidence 35799999999999985333 22345667789999999999999999999999999999999999999999999999999
Q ss_pred EEcCCCCceEEEEEEecCCC--ceEEEecCCCcccccCcccchHhhhcCccEEEEccccc-ccchhHHHHHHHHHHHHHC
Q 025807 108 RYDSTARTALAFVTLRADGE--REFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISL-IAEPCRSTQLAAMNLAKES 184 (248)
Q Consensus 108 ~~~~~~~T~~~~i~i~~~g~--r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~-~~~~~~~~~~~~~~~a~~~ 184 (248)
.+.++.+|+++++.++++|+ |++.+++..++...++++++..+.+++++++|++++.. ..+.+.+.+..+++.++++
T Consensus 80 ~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~ 159 (311)
T 2dcn_A 80 KIDPSAPTGIFFIQRHYPVPLKSESIYYRKGSAGSKLSPEDVDEEYVKSADLVHSSGITLAISSTAKEAVYKAFEIASNR 159 (311)
T ss_dssp EEETTSCCCEEEEEESCSSTTCEEEEEECTTCTGGGCCGGGCCHHHHTTCSEEEEEHHHHHSCHHHHHHHHHHHHHCSSE
T ss_pred EEcCCCCceEEEEEECCCCCccceEEEecCcChhhhCChhhcChHHHcCCCEEEEeCcccccChHHHHHHHHHHHHHHHh
Confidence 88777799999998888898 88887755567777888877767788999999998755 2455667778888887654
Q ss_pred CCeEEEeCCCCCCCCCCHHHHHHHHHHhhh--hCCEEEeCHHHHHHhHHH
Q 025807 185 GSILSYDPNLRLPLWPSEEAAREGIMSIWD--QADIIKVKFETRYSCIQK 232 (248)
Q Consensus 185 g~~v~~D~~~~~~~w~~~~~~~~~~~~~l~--~~dil~~N~~E~~~l~g~ 232 (248)
++||+.+...|. .+..++.+.++++ ++|++++|++|++.|+|.
T Consensus 160 ----~~D~~~~~~~~~-~~~~~~~~~~~l~~~~~dil~~N~~E~~~l~g~ 204 (311)
T 2dcn_A 160 ----SFDTNIRLKLWS-AEEAKREILKLLSKFHLKFLITDTDDSKIILGE 204 (311)
T ss_dssp ----EEECCCCTTTSC-HHHHHHHHHHHHHHCCEEEEEEEHHHHHHHHSC
T ss_pred ----CcCccCchhhCC-hHHHHHHHHHHHhhcCCcEEECCHHHHHHHhCC
Confidence 899998888786 5556777888999 999999999999999863
No 19
>3h49_A Ribokinase; transferase,PFKB family,sugar kinase YDJH, NYSGXRC,11206A,PSI2,, structural genomics, protein structure initiative; 1.80A {Escherichia coli k-12} PDB: 3in1_A*
Probab=99.97 E-value=1.3e-29 Score=215.98 Aligned_cols=196 Identities=20% Similarity=0.251 Sum_probs=162.3
Q ss_pred CccEEEEcceeeeeccCC--------CCcccccCCCccccCCChHHHHHHHHHHcCCceeEEEeeCCCHHHHHHHHHHHH
Q 025807 28 DRLVVCFGEMLIDFVPTV--------GGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKE 99 (248)
Q Consensus 28 ~~~ilviG~~~vD~~~~~--------~~~p~~~~~~~~~~~GG~a~N~a~ala~lG~~v~l~~~vG~D~~g~~i~~~L~~ 99 (248)
+++|+|+|++++|++... +..| .......+||+++|+|.+|++||.++.++|.||+|.+|+.+++.|++
T Consensus 5 ~~~v~~iG~~~~D~~~~~~~~~~~~~~~~p---~~~~~~~~GG~~~NvA~~la~LG~~~~~ig~vG~D~~G~~i~~~L~~ 81 (325)
T 3h49_A 5 NLDVICIGAAIVDIPLQPVSKNIFDVDSYP---LERIAMTTGGDAINEATIISRLGHRTALMSRIGKDAAGQFILDHCRK 81 (325)
T ss_dssp CEEEEEESCCEEEEEECSCCGGGGGSSCCC---CSCCCCEEESHHHHHHHHHHHTTCEEEEECEEESSHHHHHHHHHHHH
T ss_pred CCeEEEEChhhheeeccCCCCccccccccc---hheeEEccCcHHHHHHHHHHHCCCCeEEEEEECCChHHHHHHHHHHH
Confidence 588999999999996432 2222 13567899999999999999999999999999999999999999999
Q ss_pred CCCCccceEEcCCCCceEEEEEEecCCCceEEEecCCCcccccCcccchHhhhcCccEEEEcccccccchhHHHHHHHHH
Q 025807 100 NNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMN 179 (248)
Q Consensus 100 ~gI~~~~v~~~~~~~T~~~~i~i~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~ 179 (248)
.||+++++.+.++.+|+.++++++++|+|++++++ .++...+++++++.+.+.+++++|++++......+.+.+.++++
T Consensus 82 ~gV~~~~v~~~~~~~T~~~~~~~~~~g~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 160 (325)
T 3h49_A 82 ENIDIQSLKQDVSIDTSINVGLVTEDGERTFVTNR-NGSLWKLNIDDVDFARFSQAKLLSLASIFNSPLLDGKALTEIFT 160 (325)
T ss_dssp HTCBCSSCEEETTSCCCEEEEEECTTSCEEEECCT-TSHHHHCCGGGCCGGGGGGCSEEEEEEETTSTTSCHHHHHHHHH
T ss_pred cCCceeeEEecCCCCCceEEEEECCCCceeEEecc-CcccccCChhhcChhhhccCCEEEEecccCCcccCHHHHHHHHH
Confidence 99999999887778999999999989999988763 34445567777766678899999999975444345678889999
Q ss_pred HHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHhhhhCCEEEeCHHHHHHhHHH
Q 025807 180 LAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVKFETRYSCIQK 232 (248)
Q Consensus 180 ~a~~~g~~v~~D~~~~~~~w~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~ 232 (248)
.+++++ ++++|++.++..|... +.+.++++++|++++|+.|++.|+|.
T Consensus 161 ~a~~~~-~~~~d~~~~~~~~~~~----~~~~~~l~~~dil~~N~~E~~~l~g~ 208 (325)
T 3h49_A 161 QAKARQ-MIICADMIKPRLNETL----DDICEALSYVDYLFPNFAEAKLLTGK 208 (325)
T ss_dssp HHHHTT-CEEEEEECCCSSCCCH----HHHHHHHTTCSEEECBHHHHHHHHTC
T ss_pred HHHhcC-CEEEecCCchhhhhHH----HHHHHHHhhCCEEecCHHHHHHHhCC
Confidence 999998 6777777777777653 45677899999999999999999873
No 20
>3ry7_A Ribokinase; transferase; 2.15A {Staphylococcus aureus}
Probab=99.97 E-value=7.5e-30 Score=215.34 Aligned_cols=188 Identities=22% Similarity=0.243 Sum_probs=162.5
Q ss_pred CccEEEEcceeeeeccCCCCcccc-----cCCCccccCCChHHHHHHHHHHcCCceeEEEeeCCCHHHHHHHHHHHHCCC
Q 025807 28 DRLVVCFGEMLIDFVPTVGGVSLA-----EAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNV 102 (248)
Q Consensus 28 ~~~ilviG~~~vD~~~~~~~~p~~-----~~~~~~~~~GG~a~N~a~ala~lG~~v~l~~~vG~D~~g~~i~~~L~~~gI 102 (248)
|++|+++|++++|++..++++|.+ .+......+||+++|+|.+|++||.++.++|.+|+|.+|+.+++.|+++||
T Consensus 2 m~~v~viG~~~~D~~~~~~~~p~~g~~~~~~~~~~~~~GG~~~NvA~~la~lG~~~~~~~~vG~D~~g~~i~~~l~~~gv 81 (304)
T 3ry7_A 2 TNKVVILGSTNVDQFLTVERYAQPGETLHVEEAQKAFGGGKGANQAIATARMQADTTFITKIGTDGVADFILEDFKVAHI 81 (304)
T ss_dssp CCEEEEECCCEEEEEEECSSCCCTTCCCCCSSCCEEEEECHHHHHHHHHHHTTCEEEEECEEESSCTTHHHHHHHHHTTC
T ss_pred CCcEEEEccceeEEEEeccCCCCCCCceecccceeecCCCHHHHHHHHHHHCCCCeEEEEEeCCChHHHHHHHHHHHcCC
Confidence 567999999999999998888754 345678899999999999999999999999999999999999999999999
Q ss_pred CccceEEcCCCCceEEEEEEecCCCceEEEecCCCcccccCcccchH--hhhcCccEEEEcccccccchhHHHHHHHHHH
Q 025807 103 DTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDK--NLIKQGSIFHYGSISLIAEPCRSTQLAAMNL 180 (248)
Q Consensus 103 ~~~~v~~~~~~~T~~~~i~i~~~g~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~ 180 (248)
+++++.+.++.+|+.++++++++|+++++++ .+++..+++++++. +.+++++++|+++ +.+.+.+..+++.
T Consensus 82 ~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~--~ga~~~~~~~~~~~~~~~~~~~~~v~~~~-----~~~~~~~~~~~~~ 154 (304)
T 3ry7_A 82 DTSYIIKTAEAKTGQAFITVNAEGQNTIYVY--GGANMTMTPEDVINAKDAIINADFVVAQL-----EVPIPAIISAFEI 154 (304)
T ss_dssp BCTTCEEESSSCCEEEEEEECSSCCEEEEEE--CGGGGGCCHHHHHTTHHHHHTCSEEEEET-----TSCHHHHHHHHHH
T ss_pred cchhEEEcCCCCCcEEEEEECCCCCEEEEEe--cCchhcCCHHHHHHHHHHhccCCEEEEcC-----CCCHHHHHHHHHH
Confidence 9999988788899999999998899998877 56666777776653 3578999999875 2456788899999
Q ss_pred HHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHhhhhCCEEEeCHHHHHHhHHH
Q 025807 181 AKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVKFETRYSCIQK 232 (248)
Q Consensus 181 a~~~g~~v~~D~~~~~~~w~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~ 232 (248)
++++|+++++||+.... ...++++++|++++|++|++.|+|.
T Consensus 155 a~~~~~~v~~D~~~~~~----------~~~~ll~~~dil~~N~~E~~~l~g~ 196 (304)
T 3ry7_A 155 AKAHGVTTVLNPAPAKA----------LPNELLSLIDIIVPNETEAELLSGI 196 (304)
T ss_dssp HHHTTCEEEEECCSCCC----------CCHHHHTTCSEECCBHHHHHHHHSC
T ss_pred HHHcCCEEEEeCCcccc----------ccHHHHHhCCEEecCHHHHHHHhCC
Confidence 99999999999986422 2356889999999999999999873
No 21
>2c4e_A Sugar kinase MJ0406; transferase, nucleoside kinase, hyperthermophIle, ribokinase ribokinase fold; 1.70A {Methanococcus jannaschii} PDB: 2c49_A
Probab=99.97 E-value=5.3e-30 Score=216.18 Aligned_cols=188 Identities=22% Similarity=0.295 Sum_probs=158.4
Q ss_pred CccEEEEcceeeeeccCCCCcccc----cCCCccccCCChHHHHHHHHHHcCCceeEEEeeCCCHHHHHHHHHHHHCCCC
Q 025807 28 DRLVVCFGEMLIDFVPTVGGVSLA----EAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVD 103 (248)
Q Consensus 28 ~~~ilviG~~~vD~~~~~~~~p~~----~~~~~~~~~GG~a~N~a~ala~lG~~v~l~~~vG~D~~g~~i~~~L~~~gI~ 103 (248)
|++|+++|++++|++..++++|.. .+......+||+++|+|.+|++||.++.++|.+|+|.+|+.+++.|++.||+
T Consensus 5 m~~i~viG~~~iD~~~~~~~~p~~~~~~~~~~~~~~~GG~~~N~A~~la~LG~~~~~i~~vG~D~~g~~i~~~l~~~gv~ 84 (302)
T 2c4e_A 5 MEKITCVGHTALDYIFNVEKFPEPNTSIQIPSARKYYGGAAANTAVGIKKLGVNSELLSCVGYDFKNSGYERYLKNLDIN 84 (302)
T ss_dssp EEEEEEESCCEEEEEEECSSCCCTTCCCCCSCEEEEEECHHHHHHHHHHHTTCEEEEECEECTTTTTSHHHHHHHHTTCB
T ss_pred cCcEEEECceeEEEEecccccCCCCceeeecceeecCCCHHHHHHHHHHHCCCceEEEEEEeCCCchHHHHHHHHHcCCc
Confidence 557999999999999988877653 3445678899999999999999999999999999999999999999999999
Q ss_pred ccceEEcCCCCceEEEEEEecCCCceEEEecCCCcccccCcccchHhhhcCccEEEEcccccccchhHHHHHHHHHHHHH
Q 025807 104 TSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKE 183 (248)
Q Consensus 104 ~~~v~~~~~~~T~~~~i~i~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~a~~ 183 (248)
++++.+.++.+|+.++++++++|+|+++.+ .+++..+++++++. ++++++|+++. .+ +.+..+++.+++
T Consensus 85 ~~~~~~~~~~~T~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~~---~~~~~v~~~~~-----~~-~~~~~~~~~a~~ 153 (302)
T 2c4e_A 85 ISKLYYSEEEETPKAWIFTDKDNNQITFFL--WGAAKHYKELNPPN---FNTEIVHIATG-----DP-EFNLKCAKKAYG 153 (302)
T ss_dssp CTTCEECSSSCCCEEEEEECSSCCEECCEE--CGGGGGGGGCCCCC---CCEEEEEECSS-----CH-HHHHHHHHHHBT
T ss_pred ccceEeeCCCCCceEEEEECCCCCEEEEEe--CChhhhCCHhhcCc---ccCCEEEEeCC-----Cc-HHHHHHHHHHHh
Confidence 999987777789999999988899998776 45555566655543 68999999863 12 778889999999
Q ss_pred CCCeEEEeCCCCCCCCCCHHHHHHHHHHhhhhCCEEEeCHHHHHHhHHH
Q 025807 184 SGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVKFETRYSCIQK 232 (248)
Q Consensus 184 ~g~~v~~D~~~~~~~w~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~ 232 (248)
+| ++++||+.+...|. ++.+.++++++|++++|++|++.|+|.
T Consensus 154 ~g-~v~~D~~~~~~~~~-----~~~~~~~l~~~dil~~N~~E~~~l~g~ 196 (302)
T 2c4e_A 154 NN-LVSFDPGQDLPQYS-----KEMLLEIIEHTNFLFMNKHEFERASNL 196 (302)
T ss_dssp TB-EEEECCGGGGGGCC-----HHHHHHHHHTCSEEEEEHHHHHHHHHH
T ss_pred cC-CEEEeCchhhhhhh-----HHHHHHHHhcCCEEEcCHHHHHHHhCC
Confidence 99 99999986544342 356678899999999999999999986
No 22
>2fv7_A Ribokinase; structural genomics, structural genomics consort transferase; HET: ADP; 2.10A {Homo sapiens} SCOP: c.72.1.1
Probab=99.97 E-value=2.6e-29 Score=214.69 Aligned_cols=198 Identities=21% Similarity=0.271 Sum_probs=159.6
Q ss_pred cccccccccCCCCCCCccEEEEcceeeeeccCCCCcccc----cCCCccccCCChHHHHHHHHHHcCCceeEEEeeCCCH
Q 025807 13 SKDLSASMDGGSGAYDRLVVCFGEMLIDFVPTVGGVSLA----EAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDE 88 (248)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~ilviG~~~vD~~~~~~~~p~~----~~~~~~~~~GG~a~N~a~ala~lG~~v~l~~~vG~D~ 88 (248)
+++.-.-|.+ +++|+|+|++++|++..++++|.. .+......+||+++|+|.+|++||.++.++|.||+|.
T Consensus 14 ~~~~~~~m~~-----~~~vlviG~~~iD~~~~~~~~p~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~ 88 (331)
T 2fv7_A 14 LVPRGSWQEE-----VAAVVVVGSCMTDLVSLTSRLPKTGETIHGHKFFIGFGGKGANQCVQAARLGAMTSMVCKVGKDS 88 (331)
T ss_dssp ---------------CCSEEEECCCEEEEEEECSSCCCTTCCCCCSEEEEEEECHHHHHHHHHHHTTCCEEEEEEEESSH
T ss_pred cccCcccccc-----cCCEEEECcccEEEEEecCCCCCCCceEecCceEECcCCHHHHHHHHHHHCCCCeEEEEEECCCh
Confidence 4444444654 678999999999999988887654 3345678899999999999999999999999999999
Q ss_pred HHHHHHHHHHHCCCCccceEEcCCCCceEEEEEEecCCCceEEEecCCCcccccCcccchH--hhhcCccEEEEcccccc
Q 025807 89 FGYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDK--NLIKQGSIFHYGSISLI 166 (248)
Q Consensus 89 ~g~~i~~~L~~~gI~~~~v~~~~~~~T~~~~i~i~~~g~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~v~~~g~~~~ 166 (248)
+|+.+++.|++.||+++++.+.++.+|++++++++++|+|+++++ .+++..+++++++. +.++.++++|+++.
T Consensus 89 ~G~~l~~~L~~~Gv~~~~v~~~~~~~T~~~~v~~~~~g~~~~~~~--~ga~~~l~~~~~~~~~~~l~~~~~v~~~~~--- 163 (331)
T 2fv7_A 89 FGNDYIENLKQNDISTEFTYQTKDAATGTASIIVNNEGQNIIVIV--AGANLLLNTEDLRAAANVISRAKVMVCQLE--- 163 (331)
T ss_dssp HHHHHHHHHHTTTEECTTEEEESSSCCEEEEEEECTTSCEEEEEE--CGGGGGCCHHHHHHTHHHHHHCSEEEECSS---
T ss_pred hHHHHHHHHHHcCCcceeeEecCCCCCceEEEEECCCCCeEEEec--CCccccCCHHHHHHHHHhhccCCEEEEecC---
Confidence 999999999999999999988777799999999998899998877 45666677766653 24678999999753
Q ss_pred cchhHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHhhhhCCEEEeCHHHHHHhHH
Q 025807 167 AEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVKFETRYSCIQ 231 (248)
Q Consensus 167 ~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~w~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g 231 (248)
.+.+.+..+++.++++|+++++||+.+...|. .++++++|++++|++|++.|+|
T Consensus 164 --~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~---------~~ll~~~dil~~N~~Ea~~l~g 217 (331)
T 2fv7_A 164 --ITPATSLEALTMARRSGVKTLFNPAPAIADLD---------PQFYTLSDVFCCNESEAEILTG 217 (331)
T ss_dssp --SCHHHHHHHHHHHHHTTCEEEECCCSCCTTCC---------THHHHTCSEEEEEHHHHHHHHS
T ss_pred --CCHHHHHHHHHHHHHcCCEEEEeCCcccccch---------HHHHhcCCEEEeCHHHHHHHhC
Confidence 23477788999999999999999987643332 3578899999999999999987
No 23
>2rbc_A Sugar kinase, AGR_C_4560P; ribokinase family, ATP-binding site, structura genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Agrobacterium tumefaciens str}
Probab=99.97 E-value=2.4e-29 Score=215.84 Aligned_cols=186 Identities=20% Similarity=0.240 Sum_probs=158.9
Q ss_pred CccEEEEcceeeeeccCCCCcccc----cCCCccccCCChHHHHHHHHHHcCCceeEEEeeCCCHHHHHHHHHHHHCCCC
Q 025807 28 DRLVVCFGEMLIDFVPTVGGVSLA----EAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVD 103 (248)
Q Consensus 28 ~~~ilviG~~~vD~~~~~~~~p~~----~~~~~~~~~GG~a~N~a~ala~lG~~v~l~~~vG~D~~g~~i~~~L~~~gI~ 103 (248)
+++|+++|++++|++..++++|.. .+......+||+++|+|.+|++||.++.++|.||+|.+|+.+++.|++.||+
T Consensus 29 ~~~i~viG~~~iD~~~~~~~~p~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~G~~i~~~L~~~GVd 108 (343)
T 2rbc_A 29 GKHVLCVGAAVLDTLFRVADMPKGEGKVLPYEVLQIAEGMASSAAYAVHRMGGRASLWGAVGDDETGTRILRDLSESGID 108 (343)
T ss_dssp CCEEEEESCCEEEEEEECSSCCCSSSCCCCSEEEEEEECHHHHHHHHHHHTTCEEEEECEEESSHHHHHHHHHHHHTTEE
T ss_pred CCeEEEECcceEEEEeecCCCCCCCCeEeeeeeEEcCCcHHHHHHHHHHHcCCceEEEEEeCCCHHHHHHHHHHHHcCCc
Confidence 468999999999999988877653 3446678899999999999999999999999999999999999999999999
Q ss_pred ccceEEcCCCCceEEEEEEecCCCceEEEecCCCcccccCcccchHhhhcCccEEEEcccccccchhHHHHHHHHHHHHH
Q 025807 104 TSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKE 183 (248)
Q Consensus 104 ~~~v~~~~~~~T~~~~i~i~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~a~~ 183 (248)
++++.+.++.+|++++++++++|+|+++.+ .+++..++++++..+.+++++++|++++. .+.+..+++.+++
T Consensus 109 ~~~v~~~~~~~T~~~~v~~~~~g~r~~~~~--~~~~~~~~~~~l~~~~l~~~~~v~~~~~~------~~~~~~~~~~a~~ 180 (343)
T 2rbc_A 109 TSGMTVAPGARSALSTIIIDNRGERLIVPF--YDHRLHEKKRACTPEDIALFDAVLVDVRW------PELALDVLTVARA 180 (343)
T ss_dssp CTTCEEETTCCCEEEEEEECTTSCEEEEEE--CCGGGGSSCCCCCHHHHTTCSEEEECSSS------HHHHHHHHHHHHH
T ss_pred eeeEEEcCCCCCceEEEEECCCCCEEEEEc--CCCcccCChhHhcHhhhCCCCEEEEcCCC------HHHHHHHHHHHHH
Confidence 999988777799999999998899998766 44555566666665677899999999752 2567889999999
Q ss_pred CCCeEEEeCCCCCCCCCCHHHHHHHHHH-hhhhCCEEEeCHHHHHHhHH
Q 025807 184 SGSILSYDPNLRLPLWPSEEAAREGIMS-IWDQADIIKVKFETRYSCIQ 231 (248)
Q Consensus 184 ~g~~v~~D~~~~~~~w~~~~~~~~~~~~-~l~~~dil~~N~~E~~~l~g 231 (248)
+|+++++||... ++.+.+ +++++|++++|++|++.|+|
T Consensus 181 ~g~~v~~Dp~~~----------~~~~~~~ll~~~dil~~N~~Ea~~l~g 219 (343)
T 2rbc_A 181 LGKPAILDGDVA----------PVETLEGLAPAATHIVFSEPAATRLTG 219 (343)
T ss_dssp TTCCEEEEECSC----------CHHHHHHHGGGCSEEEEEHHHHHHHHC
T ss_pred CCCEEEEECCcc----------ccccHHHHHhcCCEEEeCHHHHHHHcC
Confidence 999999999642 235566 89999999999999999986
No 24
>1rkd_A Ribokinase; carbohydrate kinase, ribose, nucleotide binding, transferase; HET: RIB ADP; 1.84A {Escherichia coli} SCOP: c.72.1.1 PDB: 1gqt_A* 1rka_A 1rk2_A* 1rks_A*
Probab=99.97 E-value=1.8e-29 Score=213.57 Aligned_cols=187 Identities=21% Similarity=0.268 Sum_probs=159.4
Q ss_pred CccEEEEcceeeeeccCCCCcccc----cCCCccccCCChHHHHHHHHHHcCCceeEEEeeCCCHHHHHHHHHHHHCCCC
Q 025807 28 DRLVVCFGEMLIDFVPTVGGVSLA----EAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVD 103 (248)
Q Consensus 28 ~~~ilviG~~~vD~~~~~~~~p~~----~~~~~~~~~GG~a~N~a~ala~lG~~v~l~~~vG~D~~g~~i~~~L~~~gI~ 103 (248)
+++|+++|++++|++..++++|.. .+......+||+++|+|.+|++||.++.++|.||+|.+|+.+++.|+++||+
T Consensus 4 ~~~v~viG~~~iD~~~~~~~~p~~g~~~~~~~~~~~~GG~~~N~A~~la~lG~~~~~~~~vG~D~~g~~i~~~L~~~gv~ 83 (309)
T 1rkd_A 4 AGSLVVLGSINADHILNLQSFPTPGETVTGNHYQVAFGGKGANQAVAAGRSGANIAFIACTGDDSIGESVRQQLATDNID 83 (309)
T ss_dssp CCEEEEECCCEEEEEEECSSCCCTTCCCCCCCEEEEEECHHHHHHHHHHHHTCEEEEEEEEESSTTHHHHHHHHHTTTEE
T ss_pred CCeEEEECcceEeEEEecCCCCCCCCeeecCceeecCCCHHHHHHHHHHhCCCceEEEEEECCCHHHHHHHHHHHHcCCC
Confidence 568999999999999988887654 3445678899999999999999999999999999999999999999999999
Q ss_pred ccceEEcCCCCceEEEEEEecCCCceEEEecCCCcccccCcccchH--hhhcCccEEEEcccccccchhHHHHHHHHHHH
Q 025807 104 TSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDK--NLIKQGSIFHYGSISLIAEPCRSTQLAAMNLA 181 (248)
Q Consensus 104 ~~~v~~~~~~~T~~~~i~i~~~g~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~a 181 (248)
++++.+.++.+|+.++++++++|+++++++ .+++..+++++++. +.+++++++|+++. .+.+.+..+++.+
T Consensus 84 ~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~-----~~~~~~~~~~~~a 156 (309)
T 1rkd_A 84 ITPVSVIKGESTGVALIFVNGEGENVIGIH--AGANAALSPALVEAQRERIANASALLMQLE-----SPLESVMAAAKIA 156 (309)
T ss_dssp CTTEEEETTCCCEEEEEEECTTSCEEEEEE--CGGGGGCCHHHHHTTHHHHHHCSEEEECSS-----SCHHHHHHHHHHH
T ss_pred ccceEecCCCCCceEEEEECCCCCeEEEEe--CCchhcCCHHHHHHHHHhcccCCEEEEeCC-----CCHHHHHHHHHHH
Confidence 999987777899999999998899998876 56666677766643 35678999999753 3457778899999
Q ss_pred HHCCCeEEEeCCCCCCCCCCHHHHHHHHHHhhhhCCEEEeCHHHHHHhHH
Q 025807 182 KESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVKFETRYSCIQ 231 (248)
Q Consensus 182 ~~~g~~v~~D~~~~~~~w~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g 231 (248)
+++|+++++||+.+.. |. .++++++|++++|+.|++.|+|
T Consensus 157 ~~~g~~v~~D~~~~~~-~~---------~~ll~~~dil~~N~~E~~~l~g 196 (309)
T 1rkd_A 157 HQNKTIVALNPAPARE-LP---------DELLALVDIITPNETEAEKLTG 196 (309)
T ss_dssp HHTTCEEEECCCSCCC-CC---------HHHHTTCSEECCCHHHHHHHHS
T ss_pred HHcCCEEEEECCcccc-ch---------HHHHhhCCEEEcCHHHHHHHhC
Confidence 9999999999987633 32 3578999999999999999987
No 25
>3ikh_A Carbohydrate kinase; transferase,kinase,SAD,ribose,D-ribose metabolic process,ATP ribokinase, PFKB family,11206L1,PSI-II,nysgxrc; HET: ATP; 1.88A {Klebsiella pneumoniae subsp} PDB: 3i3y_A*
Probab=99.96 E-value=8.5e-30 Score=214.73 Aligned_cols=186 Identities=16% Similarity=0.159 Sum_probs=159.7
Q ss_pred CccEEEEcceeeeeccCCCCcccc----cCCCccccCCChHHHHHHHHHHcCCceeEEEeeCCCHHHHHHHHHHHHCCCC
Q 025807 28 DRLVVCFGEMLIDFVPTVGGVSLA----EAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVD 103 (248)
Q Consensus 28 ~~~ilviG~~~vD~~~~~~~~p~~----~~~~~~~~~GG~a~N~a~ala~lG~~v~l~~~vG~D~~g~~i~~~L~~~gI~ 103 (248)
.|+|+|+|++++|++..++++|.+ .+......+||+++|+|.+|++||.++.++|.+|+|.+|+.+++.|+++||+
T Consensus 2 ~~~i~viG~~~iD~~~~~~~~p~~g~~~~~~~~~~~~GG~~~NvA~~la~lG~~~~~i~~vG~D~~g~~i~~~l~~~gv~ 81 (299)
T 3ikh_A 2 SLRVYVTGNITVDETWSIPDIPKKGASIHGVKVSQDIGGKGANQAIILSRCGIETRLIAATGNDSNGAWIRQQIKNEPLM 81 (299)
T ss_dssp CCCEEEECCCEEEEEEECSSCCCTTCEEECEEEEEEEECHHHHHHHHHHHTTCCEEEECCCCSSHHHHHHHHHGGGSSCE
T ss_pred CceEEEECceEEEEEEecCCCCCCCCeEEeeeeeeccCCHHHHHHHHHHHCCCCeEEEEEECCCHHHHHHHHHHHHcCCc
Confidence 467999999999999999888765 3346778999999999999999999999999999999999999999999999
Q ss_pred ccceEEcCCCCceEEEEEEecCCCceEEEecCCCcccccCcccchH--hhhcCccEEEEcccccccchhHHHHHHHHHHH
Q 025807 104 TSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDK--NLIKQGSIFHYGSISLIAEPCRSTQLAAMNLA 181 (248)
Q Consensus 104 ~~~v~~~~~~~T~~~~i~i~~~g~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~a 181 (248)
++++. .++.+|+.++++++++|+|+++++ .+++..+++++++. +.++.++++|+++. .+.+.+..+++.+
T Consensus 82 ~~~v~-~~~~~T~~~~~~~~~~g~~~~~~~--~~a~~~l~~~~~~~~~~~~~~~~~v~~~g~-----~~~~~~~~~~~~a 153 (299)
T 3ikh_A 82 LLPDG-HFNQHSDTSIILNSADGDNAIITT--TAAADTFSLDEMIPHMADAVAGDILLQQGN-----FSLDKTRALFQYA 153 (299)
T ss_dssp EESSS-CCSSCCEEEEEECSSSCSCEEEEE--CHHHHHCCHHHHGGGGTTCCTTCEEEECSC-----SCHHHHHHHHHHH
T ss_pred eeeeE-ecCCCCcEEEEEEcCCCCeEEEEe--CCccccCCHHHHHHHHhhhccCCEEEECCC-----CCHHHHHHHHHHH
Confidence 99884 566799999999998999998876 56666677766642 35789999999864 3467788999999
Q ss_pred HHCCCeEEEeCCCCCCCCCCHHHHHHHHHHhhhhCCEEEeCHHHHHHhHH
Q 025807 182 KESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVKFETRYSCIQ 231 (248)
Q Consensus 182 ~~~g~~v~~D~~~~~~~w~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g 231 (248)
+++|+++++||+... +.+.++++++|++++|++|++.|++
T Consensus 154 ~~~g~~v~~D~~~~~----------~~~~~ll~~~dil~~N~~E~~~l~g 193 (299)
T 3ikh_A 154 RSRGMTTVFNPSPVN----------PDFCHLWPLIDIAVVNESEAELLQP 193 (299)
T ss_dssp HHTTCEEEECCCSCC----------GGGGGCGGGCSEEEEEHHHHHHHCC
T ss_pred HHcCCEEEEccccch----------hhHHHHHhhCCEEEecHHHHHHHhc
Confidence 999999999998642 2456789999999999999999876
No 26
>3otx_A Adenosine kinase, putative; AP5A, transferase-transferase inhibitor CO; HET: AP5; 1.55A {Trypanosoma brucei} PDB: 2xtb_A*
Probab=99.96 E-value=7.1e-29 Score=213.17 Aligned_cols=196 Identities=17% Similarity=0.209 Sum_probs=164.3
Q ss_pred CCccEEEEcceeeeeccCCCC--------------------cccc----cCCCccccCCChHHHHHHHHHHc----CCc-
Q 025807 27 YDRLVVCFGEMLIDFVPTVGG--------------------VSLA----EAPAFKKAPGGAPANVAVGISRL----GGS- 77 (248)
Q Consensus 27 ~~~~ilviG~~~vD~~~~~~~--------------------~p~~----~~~~~~~~~GG~a~N~a~ala~l----G~~- 77 (248)
+.++|+++|++++|++..++. .|.. .+......+||+++|+|.+|++| |.+
T Consensus 6 ~~~~v~~iG~~~lD~~~~v~~~~l~~~~l~~g~~~l~~~~~~p~~~~~~~~~~~~~~~GG~~~N~a~~la~L~~~~G~~~ 85 (347)
T 3otx_A 6 APLRVYVQCNPLLDVSAHVSDEFLVKYGLERGTAILLSERQKGIFDDIEKMPNVRYVPGGSGLNVARVAQWMQQAYKGKF 85 (347)
T ss_dssp CCCCEEEECCCEEEEEEECCHHHHHHTTCCTTCEEECCGGGTTHHHHHHTSTTCEEEECCHHHHHHHHHHHTTGGGTTSS
T ss_pred CCCcEEEECCceeeEEEecCHHHHHHcCCCCCceEEcCHHHHHHHHHHhccCCeEEecCCHHHHHHHHHHHhcccCCCCe
Confidence 367899999999999988874 2322 44567889999999999999999 999
Q ss_pred eeEEEeeCCCHHHHHHHHHHHHCCCCccceEEcCCCCceEEEEEEecCCCceEEEecCCCcccccCcccchH----hhhc
Q 025807 78 SAFVGKLGDDEFGYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDK----NLIK 153 (248)
Q Consensus 78 v~l~~~vG~D~~g~~i~~~L~~~gI~~~~v~~~~~~~T~~~~i~i~~~g~r~~~~~~~~~~~~~~~~~~~~~----~~~~ 153 (248)
+.++|.||+|.+|+.+++.|++.||+++++. .++.+|++++++++ +|+|+++.+ .++...++++++.. +.++
T Consensus 86 ~~~ig~vG~D~~g~~~~~~l~~~GV~~~~~~-~~~~~T~~~~i~~~-~g~r~~~~~--~ga~~~~~~~~~~~~~~~~~~~ 161 (347)
T 3otx_A 86 VTYVGCIADDRYGKVLKEAAEHEGIVMAVEH-TTKAGSGACAVCIT-GKERTLVAD--LGAANHLSSEHMRSPAVVRAMD 161 (347)
T ss_dssp EEEECEECSSHHHHHHHHHHHHHTCEECCEE-CSSSCEEEEEEEEE-TTEEEEEEE--EEGGGGCCHHHHTSHHHHHHHH
T ss_pred EEEEEEecCChHHHHHHHHHHHCCCceeccc-CCCCCCeEEEEEEE-CCceeeeec--hhhhhcCCHHHcCchhhHHHHh
Confidence 9999999999999999999999999999985 56679999999998 899998876 56666677776653 5678
Q ss_pred CccEEEEcccccccchhHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHhhhhCCEEEeCHHHHHHhHHH
Q 025807 154 QGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVKFETRYSCIQK 232 (248)
Q Consensus 154 ~~~~v~~~g~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~w~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~ 232 (248)
+++++|++|+.+. .+.+.+.++++.++++|+++++|++.. .| .+.+++.+.++++++|++++|++|++.+++.
T Consensus 162 ~~~~~~~~g~~~~--~~~~~~~~~~~~a~~~g~~v~~d~~~~--~~--~~~~~~~l~~~l~~~dil~~N~~Ea~~l~~~ 234 (347)
T 3otx_A 162 ESRIFYFSGFTLT--VDVNHVLQACRKAREVDGLFMINLSAP--FI--MQFFSAQLGEVLPYTDIIVANRHEAKEFANM 234 (347)
T ss_dssp HCSEEEEEGGGGG--TCHHHHHHHHHHHHHTTCEEEEECCCH--HH--HHHCHHHHHHHGGGCSEEEEEHHHHHHHHHH
T ss_pred hCCEEEEeeeecc--cCHHHHHHHHHHHHHhCCEEEeeCchh--hh--HHHHHHHHHHHHhhCCEEecCHHHHHHHhcc
Confidence 9999999997543 456888999999999999999999731 12 1334678889999999999999999999875
No 27
>2pkf_A Adenosine kinase; transferase, S genomics, TB structural genomics consortium, TBSGC; 1.50A {Mycobacterium tuberculosis} PDB: 2pkk_A* 2pkm_A* 2pkn_A*
Probab=99.96 E-value=2.1e-28 Score=209.34 Aligned_cols=190 Identities=21% Similarity=0.215 Sum_probs=159.1
Q ss_pred CccEEEEcceeeeeccCC----------CCcccc----cCCCccccCCChHHHHHHHHHHcCCceeEEEeeCCCHHHHHH
Q 025807 28 DRLVVCFGEMLIDFVPTV----------GGVSLA----EAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYML 93 (248)
Q Consensus 28 ~~~ilviG~~~vD~~~~~----------~~~p~~----~~~~~~~~~GG~a~N~a~ala~lG~~v~l~~~vG~D~~g~~i 93 (248)
.|+|+|+|++++|++..+ ++.|.. .+......+||+++|+|.+|++||.++.++|.+|+| +|+ +
T Consensus 10 ~m~i~v~G~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D-~g~-i 87 (334)
T 2pkf_A 10 HMTIAVTGSIATDHLMRFPGRFSEQLLPEHLHKVSLSFLVDDLVMHRGGVAGNMAFAIGVLGGEVALVGAAGAD-FAD-Y 87 (334)
T ss_dssp SSEEEEESCCEEEEEEECSSCTHHHHTTSCGGGCCCCCCCSEEEEEEECHHHHHHHHHHHTTCEEEEECEECGG-GHH-H
T ss_pred CCeEEEECChhheEEEecChHHhhhhchhhccccccccccccceecCCChHHHHHHHHHHcCCCeEEEEEEeCc-hHH-H
Confidence 468999999999999887 555543 235667889999999999999999999999999999 999 9
Q ss_pred HHHHHHCCCCccceEEcCCCCceEEEEEEecCCCceEEEecCCCcccccCcccchHh--hhcCccEEEEcccccccchhH
Q 025807 94 ANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKN--LIKQGSIFHYGSISLIAEPCR 171 (248)
Q Consensus 94 ~~~L~~~gI~~~~v~~~~~~~T~~~~i~i~~~g~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~~g~~~~~~~~~ 171 (248)
++.|++.||+++++.+.++.+|++++++++++|++++.++ .++...++++++... .+++++++|+++.. .
T Consensus 88 ~~~L~~~gV~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~--~ga~~~~~~~~~~~~~~~l~~~~~v~~~~~~------~ 159 (334)
T 2pkf_A 88 RDWLKARGVNCDHVLISETAHTARFTCTTDVDMAQIASFY--PGAMSEARNIKLADVVSAIGKPELVIIGAND------P 159 (334)
T ss_dssp HHHHHTTTEECTTCEECSSCCCEEEEEEECTTCCEEEEEE--CGGGGGGGGCCHHHHHHHHCSCSEEEEESCC------H
T ss_pred HHHHHHCCCceeeeEecCCCCceEEEEEEcCCCCEEEEEC--CchhhhCCHhhcChhhhhhcCCCEEEEcCCC------h
Confidence 9999999999999988777799999999988888887666 355555666666533 35899999998752 3
Q ss_pred HHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHhhhhCCEEEeCHHHHHHhHHH
Q 025807 172 STQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVKFETRYSCIQK 232 (248)
Q Consensus 172 ~~~~~~~~~a~~~g~~v~~D~~~~~~~w~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~ 232 (248)
+.+.++++.++++|+++++||+.+...|. .+.+.++++++|++++|++|++.++|.
T Consensus 160 ~~~~~~~~~a~~~g~~v~~D~~~~~~~~~-----~~~l~~~l~~~dil~~N~~E~~~l~g~ 215 (334)
T 2pkf_A 160 EAMFLHTEECRKLGLAFAADPSQQLARLS-----GEEIRRLVNGAAYLFTNDYEWDLLLSK 215 (334)
T ss_dssp HHHHHHHHHHHHHTCCEEEECGGGGGTSC-----HHHHHTTTTTCSEEEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCeEEEeccchhhhhh-----HHHHHHHHhcCCEEecCHHHHHHHhcc
Confidence 66778899999999999999998766664 345678999999999999999999986
No 28
>3b1n_A Ribokinase, putative; rossmann fold, ATP binding, Mg binding, nucleoside B transferase; HET: MZR ADP; 1.55A {Burkholderia thailandensis} PDB: 3b1o_A 3b1p_A* 3b1q_A* 3b1r_A*
Probab=99.96 E-value=4e-28 Score=206.88 Aligned_cols=187 Identities=21% Similarity=0.241 Sum_probs=155.1
Q ss_pred ccEEEEcceeeeeccCC----------CCcccc----cCCCccccCCChHHHHHHHHHHcCCceeEEEeeCC-CHHHHHH
Q 025807 29 RLVVCFGEMLIDFVPTV----------GGVSLA----EAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGD-DEFGYML 93 (248)
Q Consensus 29 ~~ilviG~~~vD~~~~~----------~~~p~~----~~~~~~~~~GG~a~N~a~ala~lG~~v~l~~~vG~-D~~g~~i 93 (248)
|+|+|+|++++|++..+ ++.|.. .+......+||+++|+|.+|++||.++.++|.||+ | +|+ +
T Consensus 1 m~i~v~G~~~iD~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~~D-~g~-i 78 (326)
T 3b1n_A 1 MATLICGSIAYDNIMTFEGRFREHILPDQVHLINLSFLVPTMRREFGGCAGNIAYALNLLGGDARMMGTLGAVD-AQP-Y 78 (326)
T ss_dssp -CEEEESCCEEEEEEECSSCGGGGCCTTSSSSCEEEEECCSCCCEEECHHHHHHHHHHHTTCCEEEEEEEETTT-CHH-H
T ss_pred CcEEEECcceEEEEEecchhhhhhccccccCCCCcceecccceeccCCHHHHHHHHHHHcCCCeeEEEEECCcC-HHH-H
Confidence 46999999999999887 555543 23566788999999999999999999999999999 9 899 9
Q ss_pred HHHHHHCCCCccceEEcCCCCceEEEEEEecCCCceEEEecCCCcccccCcccchHhhhcCccEEEEcccccccchhHHH
Q 025807 94 ANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRST 173 (248)
Q Consensus 94 ~~~L~~~gI~~~~v~~~~~~~T~~~~i~i~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ 173 (248)
++.|++.||+++++.+.++.+|++++++++++|++.+.++ .++...++++++... ++++++|+++. ..+.
T Consensus 79 ~~~L~~~gVd~~~v~~~~~~~T~~~~v~~~~~g~~~~~~~--~ga~~~~~~~~~~~~--~~~~~v~~~~~------~~~~ 148 (326)
T 3b1n_A 79 LDRMDALGLSREYVRVLPDTYSAQAMITTDLDNNQITAFH--PGAMMQSHVNHAGEA--KDIKLAIVGPD------GFQG 148 (326)
T ss_dssp HHHHHHHTCEEEEEEEETTCCCEEEEEEECTTCCCEEEEE--CGGGGGGGGSCGGGC--CSCSEEEECSC------CHHH
T ss_pred HHHHHHcCCcccceEEcCCCCceEEEEEECCCCceEEEEe--cChhhhcChhhcccc--cCCCEEEECCc------cHHH
Confidence 9999999999999988777799999999988888887665 455555555555432 78999999864 2466
Q ss_pred HHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHhhhhCCEEEeCHHHHHHhHHH
Q 025807 174 QLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVKFETRYSCIQK 232 (248)
Q Consensus 174 ~~~~~~~a~~~g~~v~~D~~~~~~~w~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~ 232 (248)
+.++++.++++|+++++||+.+...|. .+.+.++++++|++++|++|++.|+|.
T Consensus 149 ~~~~~~~a~~~g~~v~~D~~~~~~~~~-----~~~~~~~l~~~dil~~N~~Ea~~l~g~ 202 (326)
T 3b1n_A 149 MVQHTEELAQAGVPFIFDPGQGLPLFD-----GATLRRSIELATYIAVNDYEAKLVCDK 202 (326)
T ss_dssp HHHHHHHHHHHTCCEEECCGGGGGGCC-----HHHHHHHHHHCSEEEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCEEEEeCchhhhhcc-----HHHHHHHHHhCCEEecCHHHHHHHhCC
Confidence 788899999999999999987765553 345678899999999999999999886
No 29
>3loo_A Anopheles gambiae adenosine kinase; AP4A, P4-DI(adenosi tetraphosphate, transferase; HET: B4P; 2.00A {Anopheles gambiae}
Probab=99.96 E-value=1.7e-28 Score=212.20 Aligned_cols=208 Identities=16% Similarity=0.184 Sum_probs=163.1
Q ss_pred CcccccccccCCCCCCCccEEEEcceeeeeccCCCCc--------------------ccc----cCCCccccCCChHHHH
Q 025807 12 GSKDLSASMDGGSGAYDRLVVCFGEMLIDFVPTVGGV--------------------SLA----EAPAFKKAPGGAPANV 67 (248)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~ilviG~~~vD~~~~~~~~--------------------p~~----~~~~~~~~~GG~a~N~ 67 (248)
++.+....|.+. ++.+|+++|++++|++..+++. |.. ........+||+++|+
T Consensus 10 ~~~~~~~~~~~~---~~~~v~~iG~~~vD~~~~v~~~~l~~~~l~~g~~~l~~~~~~p~~~e~~~~~~~~~~~GG~~~N~ 86 (365)
T 3loo_A 10 GLVPRGSHMESL---RDGMLVGLGNPLLDISAVVEKDLLNKYDMQPNNAILAEEKHMPMYQELIEKYQAEYIAGGSVQNS 86 (365)
T ss_dssp -----------C---CTTSEEEECCCEEEEEEECCHHHHHHTTCCSSEEEECCGGGTHHHHHHHHHHCCEEEEECHHHHH
T ss_pred ccccCCCccccC---CCccEEEECCCeEeEEEecCHHHHHHcCCCCCCceechhHHHHHHHHHhhcCCeEEecCCHHHHH
Confidence 344545444431 2467999999999999988762 211 1224568899999999
Q ss_pred HHHHHHc---CCceeEEEeeCCCHHHHHHHHHHHHCCCCccceEEcCCCCceEEEEEEecCCCceEEEecCCCcccccCc
Q 025807 68 AVGISRL---GGSSAFVGKLGDDEFGYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCE 144 (248)
Q Consensus 68 a~ala~l---G~~v~l~~~vG~D~~g~~i~~~L~~~gI~~~~v~~~~~~~T~~~~i~i~~~g~r~~~~~~~~~~~~~~~~ 144 (248)
|.++++| |.++.++|.||+|.+|+.+++.|++.||+++++.+ ++.+|++++++++ +++|+++.+ .++...+++
T Consensus 87 a~~~~~L~~lG~~~~~ig~vG~D~~g~~~~~~l~~~GV~~~~~~~-~~~~Tg~~~i~~~-~~~r~~~~~--~ga~~~~~~ 162 (365)
T 3loo_A 87 LRVAQWILQRPRTAIFFGCVGQDEYARILEERATSNGVNVQYQRS-ATSPTGTCAVLVT-GTQRSLCAN--LAAANDFTP 162 (365)
T ss_dssp HHHHHHHHTCTTSEEEEEEEESBHHHHHHHHHHHHHTCEEEEEEE-SSSCCEEEEEEEE-TTEEEEEEE--CGGGGGCCG
T ss_pred HHHHHHhhcCCCcEEEEEEecCCchHHHHHHHHHHCCCceecccc-CCCCCeEEEEEEE-CCceEEEec--cchHhhCCH
Confidence 9999987 99999999999999999999999999999999876 6679999999998 788988876 567777888
Q ss_pred ccchH----hhhcCccEEEEcccccccchhHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHhhhhCCEEE
Q 025807 145 SELDK----NLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIK 220 (248)
Q Consensus 145 ~~~~~----~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~w~~~~~~~~~~~~~l~~~dil~ 220 (248)
++++. +.+++++++|++|+.+. .+.+.+..+++.++++|+++++|++.. .| .+..++.+.++++++|+++
T Consensus 163 ~~~~~~~~~~~~~~~~~v~i~G~~~~--~~~~~~~~~~~~a~~~g~~v~~d~~~~--~~--~~~~~~~l~~~l~~~dil~ 236 (365)
T 3loo_A 163 EHLRSDGNRAYLQGAQFFYVSGFFFT--VSFESALSVAKEAAATGRMFMMNLSAP--FV--PQFYKNNLEEIFPYVDVLF 236 (365)
T ss_dssp GGGGSHHHHHHHHHCSEEEEEGGGHH--HHHHHHHHHHHHHHHTTCEEEEECCST--HH--HHHCHHHHHHHGGGCSEEE
T ss_pred hHcCchhhHHHHhhCCEEEEeeeecc--CCHHHHHHHHHHHHHcCCEEEEECCch--hh--hHHHHHHHHHHHHhCCEEe
Confidence 77753 46789999999997542 456788999999999999999999632 12 2344678889999999999
Q ss_pred eCHHHHHHhHHH
Q 025807 221 VKFETRYSCIQK 232 (248)
Q Consensus 221 ~N~~E~~~l~g~ 232 (248)
+|++|++.+++.
T Consensus 237 ~N~~Ea~~l~g~ 248 (365)
T 3loo_A 237 GNETEAIALAKE 248 (365)
T ss_dssp EEHHHHHHHHHH
T ss_pred cCHHHHHHHhcc
Confidence 999999999985
No 30
>2qhp_A Fructokinase; NP_810670.1, PFKB family carbohydrate kinase, structural genomics, joint center for structural genomics; HET: MSE; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.96 E-value=5.1e-28 Score=203.35 Aligned_cols=185 Identities=25% Similarity=0.322 Sum_probs=147.1
Q ss_pred CccEEEEcceeeeeccCCCCcccccCCCccccCCChHHHHHHHHHHcCCceeEEEeeCCCHHHHHHHHHHHHCCCCccce
Q 025807 28 DRLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGV 107 (248)
Q Consensus 28 ~~~ilviG~~~vD~~~~~~~~p~~~~~~~~~~~GG~a~N~a~ala~lG~~v~l~~~vG~D~~g~~i~~~L~~~gI~~~~v 107 (248)
+++|+++|++++|+++. ...+||+++|+|.+|++||.++.++|.+|+|.+|+.+++.|+++|| +++
T Consensus 3 ~~~v~viG~~~~D~~p~------------~~~~GG~~~N~A~~la~LG~~~~~~~~vG~D~~g~~~~~~l~~~gv--~~v 68 (296)
T 2qhp_A 3 NNIIVGMGEALWDVLPE------------GKKIGGAPANFAYHVSQFGFDSRVVSAVGNDELGDEIMEVFKEKQL--KNQ 68 (296)
T ss_dssp CCEEEEESCCEEEEETT------------EEEEECHHHHHHHHHHHTTCEEEEEEEEESSHHHHHHHHHHHHTTC--CEE
T ss_pred cceEEEEchhheEecCC------------CCCCCCHHHHHHHHHHHcCCCeeEEEEeCCChHHHHHHHHHHHcCC--CEE
Confidence 46799999999999832 3689999999999999999999999999999999999999999999 777
Q ss_pred EEcCCCCceEEEEEEecCCCceEEEecCCCcccccCcccchHhhhcCccEEEEcccccccchhHHHHHHHHHHHHH-CCC
Q 025807 108 RYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKE-SGS 186 (248)
Q Consensus 108 ~~~~~~~T~~~~i~i~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~a~~-~g~ 186 (248)
.+.++.+|+++++.++++|+|++.+++ ......+.+.+...+.++++|++|++++....+.+.+.+..+++.+++ +++
T Consensus 69 ~~~~~~~T~~~~v~~~~~g~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~a~~~~~~ 147 (296)
T 2qhp_A 69 IERVDYPTGTVQVTLDDEGVPCYEIKE-GVAWDNIPFTDELKRLALNTRAVCFGSLAQRNEVSRATINRFLDTMPDIDGQ 147 (296)
T ss_dssp EEEESSCCEEEEEC------CCEEECS-SCGGGCCCCCHHHHHHHHTEEEEEECSGGGSSHHHHHHHHHHHHHSCCTTSC
T ss_pred eecCCCCceEEEEEECCCCCEEEEEec-CChhhhCCcchhhHhhhcCCCEEEECChHhcChHHHHHHHHHHHHHHhcCCC
Confidence 776677999999888878998877653 222333443333345678999999998755556677888889998887 699
Q ss_pred eEEEeCCCCCCCCCCHHHHHHHHHHhhhhCCEEEeCHHHHHHhHHH
Q 025807 187 ILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVKFETRYSCIQK 232 (248)
Q Consensus 187 ~v~~D~~~~~~~w~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~ 232 (248)
++++||+.+...|. .+.+.++++++|++++|++|++.|+|.
T Consensus 148 ~v~~D~~~~~~~~~-----~~~~~~~l~~~dil~~N~~E~~~l~g~ 188 (296)
T 2qhp_A 148 LKIFDINLRQDFYT-----KEVLRESFKRCNILKINDEELVTISRM 188 (296)
T ss_dssp EEEEECCCCTTCCC-----HHHHHHHHHHCSEEEEEHHHHHHHHHH
T ss_pred EEEEECcCCccccC-----HHHHHHHHHHCCEEECCHHHHHHHhcc
Confidence 99999998877674 346677889999999999999999883
No 31
>3kzh_A Probable sugar kinase; NYSGXRC, PSI-II, protein structure initiative, modified lysin, structural genomics; HET: BGC; 2.45A {Clostridium perfringens}
Probab=99.96 E-value=8.2e-28 Score=205.08 Aligned_cols=189 Identities=14% Similarity=0.101 Sum_probs=156.3
Q ss_pred CCccEEEEcceeeeeccCCCCccccc---CCCccccCCChHHHHHHHHHHcCCceeEEEeeCCCHHHHHHHHHHHHCCCC
Q 025807 27 YDRLVVCFGEMLIDFVPTVGGVSLAE---APAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVD 103 (248)
Q Consensus 27 ~~~~ilviG~~~vD~~~~~~~~p~~~---~~~~~~~~GG~a~N~a~ala~lG~~v~l~~~vG~D~~g~~i~~~L~~~gI~ 103 (248)
++++|+|+|++++|++..+++.|.+. .......+||+++|+|.+|++||.++.++|.||+|.+|+.+++.|++.||+
T Consensus 5 ~~~~v~viG~~~vD~~~~~~~~~~~g~~~~~~~~~~~GG~~~NvA~~la~LG~~v~~i~~vG~D~~g~~i~~~L~~~gv~ 84 (328)
T 3kzh_A 5 KEPYLLVFGASVVDVFGFSKASYRPYNSTPGHVKISFGGVCRNIAENMARVGVNTNFMSILGNDEHGKSIVEHSKKIGYH 84 (328)
T ss_dssp CCCCEEEECCCEEEEEEEESSCCCTTSEEEEEEEEEEECHHHHHHHHHHHTTCCEEEECEECSSHHHHHHHHHHHHHTEE
T ss_pred CCCcEEEECcEEeeeeeccCCCCCCCCCceEEEEEccCcHHHHHHHHHHHcCCCcEEEEEecCcHHHHHHHHHHHHcCCC
Confidence 37889999999999999888776541 114678999999999999999999999999999999999999999999999
Q ss_pred ccceEEcCCCCceEEEEEEecCCCceEEEecCCCcccccCcccchH--hhhcCccEEEEcccccccchhHHHHHHHHHHH
Q 025807 104 TSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDK--NLIKQGSIFHYGSISLIAEPCRSTQLAAMNLA 181 (248)
Q Consensus 104 ~~~v~~~~~~~T~~~~i~i~~~g~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~a 181 (248)
++++.+.++.+|+.++++++++|+|++.+.. .++...++++.+.. +.+..++++|+++. .+ +.+..+++ +
T Consensus 85 ~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~l~~-a 156 (328)
T 3kzh_A 85 MDDSMVIEGGSTPTYLAILDENGEMVSAIAD-MKSIGAMNTDFIDSKREIFENAEYTVLDSD-----NP-EIMEYLLK-N 156 (328)
T ss_dssp CTTCEECTTCCCCEEEEEECTTSCEEEEEEE-CGGGGGCCHHHHHHTHHHHHTCSEEEEESS-----CH-HHHHHHHH-H
T ss_pred ccceEEeCCCCCeeEEEEEcCCCCEEEEEEc-hhhhhhCCHHHHHHHHHhhccCCEEEEeCC-----cH-HHHHHHHH-H
Confidence 9999887787999999999989999875532 45555566655542 46789999999874 22 55666666 8
Q ss_pred HHCCCeEEEeCCCCCCCCCCHHHHHHHHHHhhhhCCEEEeCHHHHHHhHH
Q 025807 182 KESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVKFETRYSCIQ 231 (248)
Q Consensus 182 ~~~g~~v~~D~~~~~~~w~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g 231 (248)
++.|+++++||+.. ...+.+.++++++|++++|++|++.|+|
T Consensus 157 ~~~~~~v~~D~~~~--------~~~~~~~~~l~~~dil~~N~~E~~~l~g 198 (328)
T 3kzh_A 157 FKDKTNFILDPVSA--------EKASWVKHLIKDFHTIKPNRHEAEILAG 198 (328)
T ss_dssp HTTTSEEEEECCSH--------HHHHTSTTTGGGCSEECCBHHHHHHHHT
T ss_pred hhcCCcEEEEeCCH--------HHHHHHHHHhcCCcEEeCCHHHHHHHHC
Confidence 88999999999742 2244567789999999999999999997
No 32
>3uq6_A Adenosine kinase, putative; ribokinase, transferase; HET: ADN AMP; 2.30A {Schistosoma mansoni} PDB: 3uq9_A*
Probab=99.96 E-value=5.2e-28 Score=209.72 Aligned_cols=209 Identities=13% Similarity=0.167 Sum_probs=161.3
Q ss_pred CcccccccccCCCCCCCccEEEEcceeeeeccCCCCc-------ccc-----------------cCCCccccCCChHHHH
Q 025807 12 GSKDLSASMDGGSGAYDRLVVCFGEMLIDFVPTVGGV-------SLA-----------------EAPAFKKAPGGAPANV 67 (248)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~ilviG~~~vD~~~~~~~~-------p~~-----------------~~~~~~~~~GG~a~N~ 67 (248)
+|.+....|... ....|++||+..+|++..++.. +.- ........+||+++|+
T Consensus 13 ~l~~~~~~~~~~---~~~~v~giGnalvDi~~~v~d~~l~~~~l~kg~m~l~~~~~~~~~~~~~~~~~~~~~~GGsa~N~ 89 (372)
T 3uq6_A 13 GLVPRGSHMHDL---SEGYVFGMGNPLLDIIVDADDFMYRKYNLKKDNIVLAEEKHMTIYDEIQKKKKLNYIAGGATLNT 89 (372)
T ss_dssp ----------CC---CTTCEEEEECCEEEEEEECCTHHHHHTTCCTTEEEECCGGGTTHHHHHHTSSSCEEEECCHHHHH
T ss_pred ccccCCccccCC---CCCeEEEECCceeeEEEEeCHHHHHHcCCCCCceEEcCHHHHHHHHHHhccCCeEEeCCcHHHHH
Confidence 456666666652 1235999999999999887631 100 2234556899999999
Q ss_pred HHHHHHcCCc---eeEEEeeCCCHHHHHHHHHHHHCCCCccceEEcCCCCceEEEEEEecCCCceEEEecCCCcccccCc
Q 025807 68 AVGISRLGGS---SAFVGKLGDDEFGYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCE 144 (248)
Q Consensus 68 a~ala~lG~~---v~l~~~vG~D~~g~~i~~~L~~~gI~~~~v~~~~~~~T~~~~i~i~~~g~r~~~~~~~~~~~~~~~~ 144 (248)
|.++++||.+ +.|+|.||+|.+|+++++.|++.||+++++...++.+|+.++++++ +++|+++.+ .++...+++
T Consensus 90 a~~la~LG~~~~~~~fiG~VG~D~~G~~l~~~L~~~GV~~~~~~~~~~~~T~~~~v~~~-dgert~~~~--~ga~~~l~~ 166 (372)
T 3uq6_A 90 VKMIQWIIQKPFVCSYVGCIGADIQGKYIKNDCSALDLVTEFQIAEEPLMTGKVAVLVS-EKLRSMVTY--LGAACDLSL 166 (372)
T ss_dssp HHHHHHHHCSTTSEEEEEEECSSHHHHHHHHHHHHTTCEECCEECCTTCCEEEEEEEEC-SSCEEEEEE--EEGGGGCCH
T ss_pred HHHHHHcCCCCCcEEEEeeecCCHHHHHHHHHHHHcCCCceeeeecCCCCceEEEEEcC-CCceEEEEe--ccchhhcch
Confidence 9999999865 8999999999999999999999999999988877778999988776 899999887 466667777
Q ss_pred ccchH----hhhcCccEEEEcccccccchhHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHhhhhCCEEE
Q 025807 145 SELDK----NLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIK 220 (248)
Q Consensus 145 ~~~~~----~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~w~~~~~~~~~~~~~l~~~dil~ 220 (248)
++++. +.++.++++|++|+.+ +...+...++++.++++|+++++|++... -.+..++.+.++++++|++|
T Consensus 167 ~~i~~~~~~~~i~~a~~~~~~g~~~--~~~~~~~~~~~~~a~~~g~~v~ldls~~~----~~~~~~~~l~~ll~~~Dil~ 240 (372)
T 3uq6_A 167 AHIEQPHVWSLVEKAQVYYIAGFVI--NTCYEGMLKIAKHSLENEKLFCFNLSAPF----LSQFNTKEVDEMISYSNIVF 240 (372)
T ss_dssp HHHTSHHHHHHHHHCSEEEEEGGGH--HHHHHHHHHHHHHHHHTTCEEEEECCCHH----HHHHCHHHHHHHHTTCSEEE
T ss_pred hhhhhhhHHHHhhcccEEEEecccc--cccHHHHHHHHHHHHHcCCeEeeccccch----hhhhhHHHHHHHhhcCCccc
Confidence 76652 4578899999999744 34567888999999999999999997421 12344778889999999999
Q ss_pred eCHHHHHHhHHH
Q 025807 221 VKFETRYSCIQK 232 (248)
Q Consensus 221 ~N~~E~~~l~g~ 232 (248)
+|++|++.|++.
T Consensus 241 ~Ne~Ea~~l~~~ 252 (372)
T 3uq6_A 241 GNESEAEAYGEV 252 (372)
T ss_dssp EEHHHHHHHHHH
T ss_pred CCHHHHHHHhCC
Confidence 999999999874
No 33
>2nwh_A AGR_C_3442P, carbohydrate kinase; structural genomics, APC6199, PSI-2, PR structure initiative 2; 1.86A {Agrobacterium tumefaciens str}
Probab=99.95 E-value=7.7e-28 Score=204.32 Aligned_cols=190 Identities=17% Similarity=0.114 Sum_probs=153.6
Q ss_pred CccEEEEcceeeeeccCCCCcccccC---CCccccCCChHHHHHHHHHHcCCceeEEEeeCCCHHHHHHHHHHHHCCCCc
Q 025807 28 DRLVVCFGEMLIDFVPTVGGVSLAEA---PAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDT 104 (248)
Q Consensus 28 ~~~ilviG~~~vD~~~~~~~~p~~~~---~~~~~~~GG~a~N~a~ala~lG~~v~l~~~vG~D~~g~~i~~~L~~~gI~~ 104 (248)
|++|+|+|++++|++..+++.|.+.. ......+||+++|+|.+|++||.++.++|.+|+|.+|+.+++.|+++||++
T Consensus 3 m~~i~viG~~~~D~~~~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~G~~l~~~L~~~gV~~ 82 (317)
T 2nwh_A 3 MKKILVLGGAHIDRRGMIETETAPGASNPGSWMEEAGGGGFNAARNLSRLGFEVRIIAPRGGDVTGEVVAEAARQAGVED 82 (317)
T ss_dssp CCEEEEESCCEEEEEEEESSSCCTTSCCCEEEEEEEECHHHHHHHHHHHTTCEEEEECEEESSHHHHHHHHHHHHTTCEE
T ss_pred CCeEEEECchheEEeeccCCCCCCCCCceEeEEEeCCcHHHHHHHHHHhcCCCcEEEEeecCCchHHHHHHHHHHcCCCC
Confidence 56799999999999988776554311 136788999999999999999999999999999999999999999999999
Q ss_pred cceEEcCCCCceEEEEEEecCCCceEEEecCCCcccccCcccch--H--hhhcCccEEEEcccccccchhHHHHHHHHHH
Q 025807 105 SGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELD--K--NLIKQGSIFHYGSISLIAEPCRSTQLAAMNL 180 (248)
Q Consensus 105 ~~v~~~~~~~T~~~~i~i~~~g~r~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~ 180 (248)
++ .+.++.+|++++++++++|++++.+++ .+....++++.+. . +.+..++++|+++. .+.+.+..+++.
T Consensus 83 ~~-~~~~~~~T~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-----~~~~~~~~~~~~ 155 (317)
T 2nwh_A 83 TP-FTFLDRRTPSYTAILERDGNLVIALAD-MDLYKLFTPRRLKVRAVREAIIASDFLLCDAN-----LPEDTLTALGLI 155 (317)
T ss_dssp CC-EEETTSCCCEEEEEECTTSCEEEEEEE-CGGGGGCCHHHHTSHHHHHHHHHCSEEEEETT-----SCHHHHHHHHHH
T ss_pred CC-cccCCCCCceEEEEEcCCCCEEEEEcc-hHHHhhCCHHHhhhhhhhhHhccCCEEEEeCC-----CCHHHHHHHHHH
Confidence 98 556677999999999888999876653 3444446655443 2 45778999998752 245778899999
Q ss_pred HHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHhhhhCCEEEeCHHHHHHhHHH
Q 025807 181 AKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVKFETRYSCIQK 232 (248)
Q Consensus 181 a~~~g~~v~~D~~~~~~~w~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~ 232 (248)
++++|+++++||+.. ...+.+.++++++|++++|++|++.|+|.
T Consensus 156 a~~~g~~v~~Dp~~~--------~~~~~~~~ll~~~dil~~N~~E~~~l~g~ 199 (317)
T 2nwh_A 156 ARACEKPLAAIAISP--------AKAVKLKAALGDIDILFMNEAEARALTGE 199 (317)
T ss_dssp HHHTTCCEEEECCSH--------HHHGGGTTTGGGCSEEEEEHHHHHHHHC-
T ss_pred HHhcCCeEEEeCCCH--------HHHHHHHHHhhhCeEecCCHHHHHHHhCC
Confidence 999999999999741 11345567889999999999999999874
No 34
>2hlz_A Ketohexokinase; non-protein kinase, creatine kinase, fructokinase, isoform A, structural genomics, structural genomics consortium, SGC transferase; 1.85A {Homo sapiens} PDB: 2hqq_A 2hw1_A* 3nbv_A* 3nbw_A* 3nc2_A* 3nc9_A* 3nca_A* 3q92_A* 3qa2_A* 3qai_A* 3ro4_A* 3b3l_A
Probab=99.95 E-value=1.3e-27 Score=202.53 Aligned_cols=184 Identities=18% Similarity=0.284 Sum_probs=150.5
Q ss_pred CccEEEEcceeeeeccCCCCcccc----cCCCccccCCChHHHHHHHHHHcCCceeEEEeeCCCHHHHHHHHHHHHCCCC
Q 025807 28 DRLVVCFGEMLIDFVPTVGGVSLA----EAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVD 103 (248)
Q Consensus 28 ~~~ilviG~~~vD~~~~~~~~p~~----~~~~~~~~~GG~a~N~a~ala~lG~~v~l~~~vG~D~~g~~i~~~L~~~gI~ 103 (248)
+++|+++|++++|++..++++|.. ........+||+++|+|.+|++||.++.++|.||+|.+|+.+++.|+++||+
T Consensus 17 ~~~i~viG~~~iD~~~~~~~~p~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~v~~ig~vG~D~~G~~l~~~L~~~GV~ 96 (312)
T 2hlz_A 17 GSQILCVGLVVLDVISLVDKYPKEDSEIRCLSQRWQRGGNASNSCTILSLLGAPCAFMGSMAPGHVADFVLDDLRRYSVD 96 (312)
T ss_dssp CCEEEEESCCEEEEEEEESSCCCTTCEEECSEEEEEEESHHHHHHHHHHHHTCCEEEEEEECSSHHHHHHHHHHHHTTCB
T ss_pred CCcEEEECcceEEEeeccccCCCccceeecccceeccCccHHHHHHHHHHcCCceEEEEEecCchHHHHHHHHHHHcCCC
Confidence 578999999999999888877654 2344567899999999999999999999999999999999999999999999
Q ss_pred ccceEEcCCCCceEEEEEEe-cCCCceEEEecCCCcccccCcccchHhhhcCccEEEEcccccccchhHHHHHHHHHHHH
Q 025807 104 TSGVRYDSTARTALAFVTLR-ADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAK 182 (248)
Q Consensus 104 ~~~v~~~~~~~T~~~~i~i~-~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~a~ 182 (248)
++++.+.++.+|++++++++ .+|+|+++++ .++...+++++++...+++++++|++++. .+....+++.++
T Consensus 97 ~~~v~~~~~~~T~~~~~~v~~~~g~r~~~~~--~~~~~~~~~~~~~~~~l~~~~~v~~~~~~------~~~~~~~~~~a~ 168 (312)
T 2hlz_A 97 LRYTVFQTTGSVPIATVIINEASGSRTILYY--DRSLPDVSATDFEKVDLTQFKWIHIEGRN------ASEQVKMLQRID 168 (312)
T ss_dssp CTTEEECSSCCCCEEEEEEETTTCCEEEEEE--CCCCCCCCHHHHHTSCGGGEEEEEEECSS------HHHHHHHHHHHH
T ss_pred CccceeccCCCCCeEEEEEECCCCceEEEec--CCccccCCHHHhhHhhhccCCEEEEeccC------HHHHHHHHHHHH
Confidence 99998776668888888776 4799998877 34455566666654456889999999862 245566777777
Q ss_pred HC--------CCeEEEeCCCCCCCCCCHHHHHHHHHHhhhhCCEEEeCHHHHHHh
Q 025807 183 ES--------GSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVKFETRYSC 229 (248)
Q Consensus 183 ~~--------g~~v~~D~~~~~~~w~~~~~~~~~~~~~l~~~dil~~N~~E~~~l 229 (248)
++ ++++++|+... ++.+.++++++|++++|++|++.+
T Consensus 169 ~~~~~~~~~~~~~v~~d~~~~----------~~~~~~~l~~~dil~~n~~ea~~l 213 (312)
T 2hlz_A 169 AHNTRQPPEQKIRVSVEVEKP----------REELFQLFGYGDVVFVSKDVAKHL 213 (312)
T ss_dssp HHHTTSCGGGCCEEEEEECSC----------CGGGGGGGGSSSEEEECHHHHHHT
T ss_pred HhcccccCCCCeEEEEEcccc----------hHHHHHHHhcCCEEEEcHHHHHHc
Confidence 66 78999998652 234577999999999999999987
No 35
>1vm7_A Ribokinase; TM0960, structural genomics, JCSG, protein struc initiative, PSI, joint center for structural genomics, TRAN; 2.15A {Thermotoga maritima} SCOP: c.72.1.1
Probab=99.95 E-value=3.9e-27 Score=199.48 Aligned_cols=182 Identities=21% Similarity=0.277 Sum_probs=151.3
Q ss_pred CccEEEEcceeeeeccCCCCcccc----cCCCccccCCChHHHHHHHHHHcCCc-eeEEEeeCCCHHHHHHHHHHHHCCC
Q 025807 28 DRLVVCFGEMLIDFVPTVGGVSLA----EAPAFKKAPGGAPANVAVGISRLGGS-SAFVGKLGDDEFGYMLANILKENNV 102 (248)
Q Consensus 28 ~~~ilviG~~~vD~~~~~~~~p~~----~~~~~~~~~GG~a~N~a~ala~lG~~-v~l~~~vG~D~~g~~i~~~L~~~gI 102 (248)
..+|+|+|++++|++..++++|.. .+......+||+++|+|.+|++||.+ +.++|.+|+|.+|+.+++.|++.||
T Consensus 14 ~~~v~vvG~~~iD~~~~~~~~p~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~~i~~vG~D~~G~~l~~~L~~~gV 93 (311)
T 1vm7_A 14 FLVISVVGSSNIDIVLKVDHFTKPGETQKAIEMNVFPGGKGANQAVTVAKIGEKGCRFVTCIGNDDYSDLLIENYEKLGI 93 (311)
T ss_dssp CCCEEEECCCEEEEEEECSSCCCTTCEEECSEEEEEEECHHHHHHHHHHHHHSSCEEEEEEECSSHHHHHHHHHHHHTTE
T ss_pred cCCEEEECcceeeEEEecccCCCCCceEecCeeeecCCCHHHHHHHHHHHcCCCceEEEEEECCChHHHHHHHHHHHCCC
Confidence 456999999999999999988764 34567788999999999999999999 9999999999999999999999999
Q ss_pred CccceEEcCCCCceEEEEEEecCCCceEEEecCCCcccccCcccchHhhhcCccEEEEcccccccchhHHHHHHHHHHHH
Q 025807 103 DTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAK 182 (248)
Q Consensus 103 ~~~~v~~~~~~~T~~~~i~i~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~a~ 182 (248)
++.+.++.+|+.++++++++|+++++.+ .+++..+++++++.+.+++++++|+++.. +.+.+. +.++
T Consensus 94 ---~v~~~~~~~T~~~~~~~~~~g~~~~~~~--~ga~~~l~~~~~~~~~~~~~~~v~~~~~~-----~~~~~~---~~a~ 160 (311)
T 1vm7_A 94 ---TGYIRVSLPTGRAFIEVDKTGQNRIIIF--PGANAELKKELIDWNTLSESDILLLQNEI-----PFETTL---ECAK 160 (311)
T ss_dssp ---EEEEECSSCCCEEEEEECTTSCEEEEEE--CGGGGGCCGGGCCHHHHTTCSEEEECSSS-----CHHHHH---HHHH
T ss_pred ---EEEEcCCCCCeEEEEEECCCCCEEEEEe--cCccccCCHHHhChhhcccCCEEEEeCCC-----CHHHHH---HHHH
Confidence 6766667799999999988899999887 46666677777665667899999997632 223333 3378
Q ss_pred HCCCeEEEeCCCCCCCCCCHHHHHHHHHHhhhhCCEEEeCHHHHHHhHHH
Q 025807 183 ESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVKFETRYSCIQK 232 (248)
Q Consensus 183 ~~g~~v~~D~~~~~~~w~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~ 232 (248)
++|+++++||+.... ...++++++|++++|++|++.|+|.
T Consensus 161 ~~~~~v~~Dp~~~~~----------~~~~ll~~~dil~~N~~E~~~l~g~ 200 (311)
T 1vm7_A 161 RFNGIVIFDPAPAQG----------INEEIFQYLDYLTPNEKEIEALSKD 200 (311)
T ss_dssp HCCSEEEECCCSCTT----------CCGGGGGGCSEECCBHHHHHHHHHH
T ss_pred HcCCEEEEeCcchhh----------hhHHHHhhCCEEeCCHHHHHHHhCC
Confidence 889999999986422 2346889999999999999999985
No 36
>2abs_A Adenosine kinase, AK; ribokinase fold, alpha/beta, intermediate conformation, signaling protein,transferase; HET: ACP; 1.10A {Toxoplasma gondii} SCOP: c.72.1.1 PDB: 2a9z_A* 2aa0_A* 2ab8_A* 2a9y_A* 1dgm_A* 1lio_A 1lii_A* 1lij_A* 1lik_A*
Probab=99.95 E-value=4.1e-27 Score=204.86 Aligned_cols=195 Identities=18% Similarity=0.201 Sum_probs=158.2
Q ss_pred CccEEEEcceeeeeccCCCC-c-----ccc-----------------cCCCccccCCChHHHHHHHHHHc---CCceeEE
Q 025807 28 DRLVVCFGEMLIDFVPTVGG-V-----SLA-----------------EAPAFKKAPGGAPANVAVGISRL---GGSSAFV 81 (248)
Q Consensus 28 ~~~ilviG~~~vD~~~~~~~-~-----p~~-----------------~~~~~~~~~GG~a~N~a~ala~l---G~~v~l~ 81 (248)
+++|+|+|++++|++..+++ + |.+ .+......+||+++|+|.+|++| |.++.++
T Consensus 32 ~~~vlviG~~~lD~~~~~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~GG~~~NvA~~la~Lg~~g~~v~~i 111 (383)
T 2abs_A 32 PMRVFAIGNPILDLVAEVPSSFLDEFFLKRGDATLATPEQMRIYSTLDQFNPTSLPGGSALNSVRVVQKLLRKPGSAGYM 111 (383)
T ss_dssp CCCEEEECCCEEEEEEECCHHHHHHTTCCTTCEEECCGGGGGGGGTGGGGCCEEEEESHHHHHHHHHHHHHCSTTSEEEE
T ss_pred CceEEEECcchheeEeccCHHHHHhcCCCCCceeechhhHHHHHHhhccccceeeCCChHHHHHHHHHHhccCCCcEEEE
Confidence 57899999999999988765 2 111 13355778999999999999999 8999999
Q ss_pred EeeCCCHHHHHHHHHHHHCCCCccceEEcCCCCceEEEEEEecCCCceEEEecCCCcccccCcccchHhhhcCccEEEEc
Q 025807 82 GKLGDDEFGYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYG 161 (248)
Q Consensus 82 ~~vG~D~~g~~i~~~L~~~gI~~~~v~~~~~~~T~~~~i~i~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 161 (248)
|.||+|.+|+.+++.|+++||+++++. .++.+|++++++++ +|+|+++.+ .+++..+++++...+.+++++++|++
T Consensus 112 g~vG~D~~G~~i~~~L~~~GV~~~~v~-~~~~~T~~~~~~~~-~g~r~~~~~--~~a~~~l~~~~~~~~~l~~~~~v~~~ 187 (383)
T 2abs_A 112 GAIGDDPRGQVLKELCDKEGLATRFMV-APGQSTGVCAVLIN-EKERTLCTH--LGACGSFRLPEDWTTFASGALIFYAT 187 (383)
T ss_dssp EEECSSHHHHHHHHHHHHHTCEEEEEE-CTTCCCEEEEEEEE-TTEEEEEEE--CGGGGGCCCCTTHHHHTTTCCEEEEE
T ss_pred EEecCChhHHHHHHHHHHcCCceeeee-cCCCCCeEEEEEEc-CCceeEeec--cChhhhCChhhhhHHHhhcCCEEEEe
Confidence 999999999999999999999999886 45669999999987 788887765 56665566654444568899999999
Q ss_pred ccccccchhHHHHHHHHHHHHH-CCCeEEEeCCCCCCCCCCHHHHHHHHHHhhhhCCEEEeCHHHHHHhHHH
Q 025807 162 SISLIAEPCRSTQLAAMNLAKE-SGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVKFETRYSCIQK 232 (248)
Q Consensus 162 g~~~~~~~~~~~~~~~~~~a~~-~g~~v~~D~~~~~~~w~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~ 232 (248)
|+... .+.+.+..+++.+++ +|+++++|+... .| .+.+++.+.++++++|++++|++|++.|++.
T Consensus 188 g~~~~--~~~~~~~~~~~~a~~~~g~~v~~d~~~~--~~--~~~~~~~l~~ll~~~dil~pN~~Ea~~L~g~ 253 (383)
T 2abs_A 188 AYTLT--ATPKNALEVAGYAHGIPNAIFTLNLSAP--FC--VELYKDAMQSLLLHTNILFGNEEEFAHLAKV 253 (383)
T ss_dssp GGGGT--TCHHHHHHHHHHHHTSTTCEEEEECCCH--HH--HHHCHHHHHHHHHTCSEEEEEHHHHHHHHHH
T ss_pred eeccc--CCHHHHHHHHHHHHHhcCCEEEEeCCcH--HH--HHHHHHHHHHHHhhCCEEeCCHHHHHHHhcc
Confidence 87542 355888899999999 999999998631 12 1334567788999999999999999999764
No 37
>1bx4_A Protein (adenosine kinase); human adenosine kinase, transferase; HET: ADN; 1.50A {Homo sapiens} SCOP: c.72.1.1 PDB: 2i6a_A* 2i6b_A*
Probab=99.95 E-value=1.6e-27 Score=204.59 Aligned_cols=195 Identities=16% Similarity=0.197 Sum_probs=158.4
Q ss_pred CccEEEEcceeeeeccCCCC-c-----ccc------------------cCCCccccCCChHHHHHHHHHHcC----Ccee
Q 025807 28 DRLVVCFGEMLIDFVPTVGG-V-----SLA------------------EAPAFKKAPGGAPANVAVGISRLG----GSSA 79 (248)
Q Consensus 28 ~~~ilviG~~~vD~~~~~~~-~-----p~~------------------~~~~~~~~~GG~a~N~a~ala~lG----~~v~ 79 (248)
.++|+|+|++++|++..+++ + +.+ .+......+||+++|+|.+|++|| .++.
T Consensus 6 ~~~v~viG~~~~D~~~~~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~NvA~~la~lgg~~~~~~~ 85 (345)
T 1bx4_A 6 ENILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHAGGSTQNSIKVAQWMIQQPHKAAT 85 (345)
T ss_dssp TTCEEEECCCEEEEEEECCHHHHHHTTCCSSEEEECCGGGHHHHHHHHHHSCCEEEEECHHHHHHHHHHHHHCSSTTCEE
T ss_pred cccEEEECCcceeEEEecCHHHHHHcCCCCCcEEEchHHHHHHHHHHhccCCceecCCcHHHHHHHHHHHhcCCCCCcEE
Confidence 46799999999999988776 1 110 124667889999999999999996 9999
Q ss_pred EEEeeCCCHHHHHHHHHHHHCCCCccceEEcCCCCceEEEEEEecCCCceEEEecCCCcccccCcc-cch----HhhhcC
Q 025807 80 FVGKLGDDEFGYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCES-ELD----KNLIKQ 154 (248)
Q Consensus 80 l~~~vG~D~~g~~i~~~L~~~gI~~~~v~~~~~~~T~~~~i~i~~~g~r~~~~~~~~~~~~~~~~~-~~~----~~~~~~ 154 (248)
++|.||+|.+|+.+++.|+++||+++++.. ++.+|+.++++++ +|+|+++.+ .+++..++++ +++ .+.+++
T Consensus 86 ~ig~vG~D~~G~~i~~~L~~~gv~~~~v~~-~~~~T~~~~~~~~-~g~r~~~~~--~~a~~~~~~~~~~~~~~~~~~~~~ 161 (345)
T 1bx4_A 86 FFGCIGIDKFGEILKRKAAEAHVDAHYYEQ-NEQPTGTCAACIT-GDNRSLIAN--LAAANCYKKEKHLDLEKNWMLVEK 161 (345)
T ss_dssp EEEEEESSHHHHHHHHHHHHTTCEEEEEEE-SSSCCCEEEEEEE-TTEEEEEEE--CGGGGGCCGGGTTTSHHHHHHHHH
T ss_pred EEEEeCCChhHHHHHHHHHHcCCceeeeec-CCCCCceEEEEEc-CCceEeeec--cchHhhcCcccccCcHHHHHHHhh
Confidence 999999999999999999999999998864 5669999999887 788887665 5566666666 554 245678
Q ss_pred ccEEEEcccccccchhHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHhhhhCCEEEeCHHHHHHhHHH
Q 025807 155 GSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVKFETRYSCIQK 232 (248)
Q Consensus 155 ~~~v~~~g~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~w~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~ 232 (248)
++++|++|+... .+.+.+..+++.++++|+++++|+... .| .+..++.+.++++++|++++|++|++.|+|.
T Consensus 162 ~~~v~~~g~~~~--~~~~~~~~~~~~a~~~g~~v~~d~~~~--~~--~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~ 233 (345)
T 1bx4_A 162 ARVCYIAGFFLT--VSPESVLKVAHHASENNRIFTLNLSAP--FI--SQFYKESLMKVMPYVDILFGNETEAATFARE 233 (345)
T ss_dssp CSEEEEEGGGGG--TCHHHHHHHHHHHHHTTCEEEEECCSH--HH--HHHTHHHHHHHGGGCSEEEEEHHHHHHHHHH
T ss_pred CCEEEEEEEecc--CCHHHHHHHHHHHHHcCCEEEEeCCcH--HH--HHHHHHHHHHHhccCCEEeCCHHHHHHHhcc
Confidence 999999987542 456888899999999999999999631 12 1234566788999999999999999999874
No 38
>2afb_A 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro-3- deoxygluconokinase, PFKB family carbohy kinase, structural genomics; 2.05A {Thermotoga maritima} SCOP: c.72.1.1
Probab=99.95 E-value=2.3e-26 Score=197.84 Aligned_cols=200 Identities=25% Similarity=0.358 Sum_probs=160.8
Q ss_pred CccEEEEcceeeeeccCCCCcccccCCCccccCCChHHHHHHHHHHcCCceeEEEeeCCCHHHHHHHHHHHHCCCCccce
Q 025807 28 DRLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGV 107 (248)
Q Consensus 28 ~~~ilviG~~~vD~~~~~~~~p~~~~~~~~~~~GG~a~N~a~ala~lG~~v~l~~~vG~D~~g~~i~~~L~~~gI~~~~v 107 (248)
.|+|+++|+.+.++... ...+...+......+||+++|+|.+|++||.++.++|.||+|.+|+.+++.|++.||+++++
T Consensus 12 ~~~~~~~ge~l~~~~~~-~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~G~~i~~~L~~~gv~~~~v 90 (351)
T 2afb_A 12 HMKVVTFGEIMLRLSPP-DHKRIFQTDSFDVTYGGAEANVAAFLAQMGLDAYFVTKLPNNPLGDAAAGHLRKFGVKTDYI 90 (351)
T ss_dssp CCEEEEESCCEEEEECS-TTCCGGGCSEEEEEEECHHHHHHHHHHHTTSEEEEEEEECSSHHHHHHHHHHHHTTCBCTTE
T ss_pred cceEEEechhhheecCC-CCccccccceeeEecCChHHHHHHHHHHcCCCeEEEEEeCCCHHHHHHHHHHHHcCCcceeE
Confidence 58899999999997653 22233345677889999999999999999999999999999999999999999999999999
Q ss_pred EEcCCCCceEEEEEEecCCCc-eEEE-ecCCCcccccCcccchHh-hhcCccEEEEccccc-ccchhHHHHHHHHHHHHH
Q 025807 108 RYDSTARTALAFVTLRADGER-EFLF-FRHPSADMLLCESELDKN-LIKQGSIFHYGSISL-IAEPCRSTQLAAMNLAKE 183 (248)
Q Consensus 108 ~~~~~~~T~~~~i~i~~~g~r-~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~g~~~-~~~~~~~~~~~~~~~a~~ 183 (248)
.+ ++.+|+++++.++. ++| +++. .+...+...++++++... .+++++++|++++.. .++...+.+.++++.+++
T Consensus 91 ~~-~~~~t~~~~v~~~~-~~r~~~v~~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~ 168 (351)
T 2afb_A 91 AR-GGNRIGIYFLEIGA-SQRPSKVVYDRAHSAISEAKREDFDWEKILDGARWFHFSGITPPLGKELPLILEDALKVANE 168 (351)
T ss_dssp EE-CSSCCCEEEEECCB-TTBCCEEEEECTTCTTTTCCGGGCCHHHHTTTEEEEEEETTSGGGSTTHHHHHHHHHHHHHH
T ss_pred EE-CCCcceEEEEEecC-CCCcceEEEeCCCChhhhCChhhCCHHHhhcCCCEEEEeCcccccChhHHHHHHHHHHHHHH
Confidence 76 55699999887664 544 4443 333334445666666543 468999999998754 344556888899999999
Q ss_pred CCCeEEEeCCCCCCCCCCHHHHHHHHHHhhhhCCEEEeCHHHHHHhHH
Q 025807 184 SGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVKFETRYSCIQ 231 (248)
Q Consensus 184 ~g~~v~~D~~~~~~~w~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g 231 (248)
+|+++++||+.+...|. .+..++.+.++++++|++++|+.|+..|+|
T Consensus 169 ~g~~v~~Dp~~~~~~~~-~~~~~~~~~~ll~~~dil~~N~~E~~~l~g 215 (351)
T 2afb_A 169 KGVTVSCDLNYRARLWT-KEEAQKVMIPFMEYVDVLIANEEDIEKVLG 215 (351)
T ss_dssp HTCEEEEECCCCTTTCC-HHHHHHHHHHHGGGCSEEEECHHHHHHHHC
T ss_pred cCCEEEEeCCCchhcCC-hHHHHHHHHHHHhhCCEEEecHHHHHHHhC
Confidence 99999999998877785 345677888999999999999999999976
No 39
>3bf5_A Ribokinase related protein; 10640157, putative ribokinase, structural genomics, joint CE structural genomics, JCSG; HET: MSE; 1.91A {Thermoplasma acidophilum dsm 1728}
Probab=99.95 E-value=2.1e-27 Score=200.75 Aligned_cols=181 Identities=10% Similarity=0.171 Sum_probs=148.2
Q ss_pred CccEEEEcceeeeeccCCCCcccc---cCCCccccCCChHHHHHHHHHHcCCceeEEEeeCCCHHHHHHHHHHHHCCCCc
Q 025807 28 DRLVVCFGEMLIDFVPTVGGVSLA---EAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDT 104 (248)
Q Consensus 28 ~~~ilviG~~~vD~~~~~~~~p~~---~~~~~~~~~GG~a~N~a~ala~lG~~v~l~~~vG~D~~g~~i~~~L~~~gI~~ 104 (248)
+++|+++|++++|++..++++|.. .+......+||+++|+|.+|++||.++.++|.+|+| +|+.+++.|++.||++
T Consensus 20 ~~~v~viG~~~iD~~~~~~~~p~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D-~G~~i~~~L~~~gV~~ 98 (306)
T 3bf5_A 20 MRFLAYFGHLNIDVLISVDSIPREGSVNVKDLRPRFGGTAGNFAIVAQKFRIPFDLYSAVGMK-THREYLAMIESMGINT 98 (306)
T ss_dssp CEEEEEECCCEEEEEEECSCCCSSEEEECSEEEEEEEHHHHHHHHHHHHTTCCCEEEEEEETT-TCHHHHHHHHHTTCCC
T ss_pred CCcEEEECCceEEEEEecCCCCCCceEECcceEecCCChHHHHHHHHHHcCCCeEEEEEEeCC-hHHHHHHHHHHcCCCc
Confidence 578999999999999988877721 344567889999999999999999999999999999 9999999999999999
Q ss_pred cceEEcCCCCceEEEEEEecCCCceEEEecCCCcccccCcccchHhhhcCccEEEEcccccccchhHHHHHHHHHHHHHC
Q 025807 105 SGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKES 184 (248)
Q Consensus 105 ~~v~~~~~~~T~~~~i~i~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~a~~~ 184 (248)
+++.+.++.+|+++++++++ |+|+++.+ .+++..++ +++. ++++++|+++.. ...++++.+++
T Consensus 99 ~~v~~~~~~~T~~~~~~~~~-g~r~~~~~--~ga~~~~~-~~l~----~~~~~v~~~~~~--------~~~~~~~~a~~- 161 (306)
T 3bf5_A 99 GHVEKFEDESGPICYIATDG-KKQVSFMH--QGAMAAWA-PQLA----DEYEYVHFSTGP--------NYLDMAKSIRS- 161 (306)
T ss_dssp TTEEEETTCCCSEEEEEECS-SCEEEEEE--CTHHHHCC-CCCC----SCEEEEEECSSS--------SHHHHHHHCCS-
T ss_pred hheEecCCCCCceEEEEEcC-CeeEEEEe--CChhhhhh-Hhhc----CCCCEEEECChH--------HHHHHHHHhCC-
Confidence 99877777789999999987 99988776 45555555 4442 689999999763 34567777664
Q ss_pred CCeEEEeCCCCCCCCCCHHHHHHHHHHhhhhCCEEEeCHHHHHHhHHHH
Q 025807 185 GSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVKFETRYSCIQKM 233 (248)
Q Consensus 185 g~~v~~D~~~~~~~w~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~ 233 (248)
++++||+.+...|. ++.+.++++++|++++|++|++.|+|..
T Consensus 162 --~v~~D~~~~~~~~~-----~~~~~~~l~~~dil~~N~~E~~~l~g~~ 203 (306)
T 3bf5_A 162 --KIIFDPSQEIHKYS-----KDELKKFHEISYMSIFNDHEYRVFREMT 203 (306)
T ss_dssp --EEEECCGGGGGGSC-----HHHHHHHHHHCSEEEEEHHHHHHHHHHH
T ss_pred --cEEEcCchhhhhcc-----HHHHHHHHhcCCEEEcCHHHHHHHhCCC
Confidence 99999985422121 4567788999999999999999998863
No 40
>3ie7_A LIN2199 protein; phosphofructokinases, transferase, glycero ION, PSI-II, NYSGXRC, kinase, structural genomics, structure initiative; HET: ATP; 1.60A {Listeria innocua} PDB: 3hic_A* 3jul_A* 3q1y_A
Probab=99.93 E-value=2.3e-25 Score=189.17 Aligned_cols=184 Identities=18% Similarity=0.133 Sum_probs=149.9
Q ss_pred ccEEEEcceeeee-ccCCCCccc---ccCCCccccCCChHHHHHHHHHHcCCceeEEEeeCCCHHHHHHHHHHHHCCCCc
Q 025807 29 RLVVCFGEMLIDF-VPTVGGVSL---AEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDT 104 (248)
Q Consensus 29 ~~ilviG~~~vD~-~~~~~~~p~---~~~~~~~~~~GG~a~N~a~ala~lG~~v~l~~~vG~D~~g~~i~~~L~~~gI~~ 104 (248)
|-+.+.+++++|+ +..++++.. ..+......+||+++|+|.+|++||.++.++|.+|+| +|+.+++.|+++||++
T Consensus 3 mi~tvt~np~iD~~~~~v~~~~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~d-~g~~i~~~l~~~gv~~ 81 (320)
T 3ie7_A 3 LIYTITLNPAIDRLLFIRGELEKRKTNRVIKTEFDCGGKGLHVSGVLSKFGIKNEALGIAGSD-NLDKLYAILKEKHINH 81 (320)
T ss_dssp CEEEEESSCEEEEEEEESSSCCTTSCCCCSEEEEEEESHHHHHHHHHHHHTCCEEEEEEEEST-THHHHHHHHHHTTCCB
T ss_pred eEEEEecchHHeeeEEEcCCccCCCeeEeceeeecCCchHHHHHHHHHHcCCCeEEEEEecCc-hHHHHHHHHHHcCCce
Confidence 4577889999999 999887632 1456678999999999999999999999999999999 9999999999999999
Q ss_pred cceEEcCCCCceEEEEEEecCCC--ceEEEecCCCcccccCcccchH------hhhcCccEEEEcccccccchhHHHHHH
Q 025807 105 SGVRYDSTARTALAFVTLRADGE--REFLFFRHPSADMLLCESELDK------NLIKQGSIFHYGSISLIAEPCRSTQLA 176 (248)
Q Consensus 105 ~~v~~~~~~~T~~~~i~i~~~g~--r~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~v~~~g~~~~~~~~~~~~~~ 176 (248)
+++...++ +|+.++++++ +|+ |+++.. .++ .+++++++. +.++++|++|++|+. ....+.+.+..
T Consensus 82 ~~v~~~~~-~t~~~~~~~~-~g~~~~~~~~~--~g~--~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~-~~~~~~~~~~~ 154 (320)
T 3ie7_A 82 DFLVEAGT-STRECFVVLS-DDTNGSTMIPE--AGF--TVSQTNKDNLLKQIAKKVKKEDMVVIAGSP-PPHYTLSDFKE 154 (320)
T ss_dssp CCEEETTC-CCEEEEEEEE-TTCSCCEEEEC--CCC--CCCHHHHHHHHHHHHHHCCTTCEEEEESCC-CTTCCHHHHHH
T ss_pred EEEEecCC-CCceEEEEEE-CCCceeEEEeC--CCC--CCCHHHHHHHHHHHHHHhcCCCEEEEeCCC-CCCCCHHHHHH
Confidence 99855555 8999999998 788 887654 333 355554432 457899999998863 33455688899
Q ss_pred HHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHhhh-hCCEEEeCHHHHHHhHHH
Q 025807 177 AMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWD-QADIIKVKFETRYSCIQK 232 (248)
Q Consensus 177 ~~~~a~~~g~~v~~D~~~~~~~w~~~~~~~~~~~~~l~-~~dil~~N~~E~~~l~g~ 232 (248)
+++.++++|+++++||+. +.+.+.+. ++|++++|++|++.|+|.
T Consensus 155 ~~~~a~~~g~~v~~D~~~------------~~l~~~l~~~~dil~~N~~E~~~l~g~ 199 (320)
T 3ie7_A 155 LLRTVKATGAFLGCDNSG------------EYLNLAVEMGVDFIKPNEDEVIAILDE 199 (320)
T ss_dssp HHHHHHHHTCEEEEECCH------------HHHHHHHHHCCSEECCBTTGGGGGSCT
T ss_pred HHHHHHhcCCEEEEECCh------------HHHHHHHhcCCeEEeeCHHHHHHHhCC
Confidence 999999999999999963 23444554 999999999999999764
No 41
>4e84_A D-beta-D-heptose 7-phosphate kinase; LPS-heptose biosynthesis, beta-clAsp dimerization region, PF carbohydrate kinase, phosphorylation; HET: MSE ANP M7B GMZ; 2.60A {Burkholderia cenocepacia} PDB: 4e8w_A* 4e8y_A* 4e8z_A*
Probab=99.93 E-value=1.5e-25 Score=192.93 Aligned_cols=195 Identities=17% Similarity=0.201 Sum_probs=148.3
Q ss_pred CcccccccccCCCCCCCccEEEEcceeeeeccC--CCCc----ccc--cCCCccccCCChHHHHHHHHHHcCCceeEEEe
Q 025807 12 GSKDLSASMDGGSGAYDRLVVCFGEMLIDFVPT--VGGV----SLA--EAPAFKKAPGGAPANVAVGISRLGGSSAFVGK 83 (248)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~ilviG~~~vD~~~~--~~~~----p~~--~~~~~~~~~GG~a~N~a~ala~lG~~v~l~~~ 83 (248)
.+++.+.+|+ +++|+|+|++++|++.. ++++ |.+ .+......+||+ +|+|.+|++||.++.++|.
T Consensus 43 ~~~~~~~~~~------~~~ilvvG~~~~D~~~~g~v~r~~p~~p~~~~~~~~~~~~~GG~-~NvA~~la~LG~~v~~ig~ 115 (352)
T 4e84_A 43 VVPVPREQLA------RSRVLVVGDVMLDRYWFGNVDRISPEAPVPVVHVQRQEERLGGA-ANVARNAVTLGGQAGLLCV 115 (352)
T ss_dssp SCCCCHHHHT------TCEEEEEECEEEEEEEEEEEEEECSSSSSEEEEEEEEEEEEEEH-HHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHhcC------CCcEEEECccceEEEEeecccccCCCCCcceEEeeEEEEecChH-HHHHHHHHHcCCCEEEEEE
Confidence 4667777777 47899999999999875 3332 332 445677899997 8999999999999999999
Q ss_pred eCCCHHHHHHHHHHHHCCCCccceEEcCCCCceEEEEEEecCCCceEEEecCCCcccccCcccch--HhhhcCccEEEEc
Q 025807 84 LGDDEFGYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELD--KNLIKQGSIFHYG 161 (248)
Q Consensus 84 vG~D~~g~~i~~~L~~~gI~~~~v~~~~~~~T~~~~i~i~~~g~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~v~~~ 161 (248)
||+|.+|+.+++.|+++||++ .+.+.++.+|+.++++++.++++..+... .+.+.....+.+. .+.++++|++|++
T Consensus 116 vG~D~~G~~i~~~L~~~GV~~-~~~~~~~~~T~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~v~~~ 193 (352)
T 4e84_A 116 VGCDEPGERIVELLGSSGVTP-HLERDPALPTTIKLRVLARQQQLLRVDFE-AMPTHEVLLAGLARFDVLLPQHDVVLMS 193 (352)
T ss_dssp EESSHHHHHHHHHHTTTSCEE-EEEEETTSCCCEEEEEEESSCEEEEEEEC-CCCCHHHHHHHHHHHHHHGGGCSEEEEE
T ss_pred eCCChhHHHHHHHHHHcCCce-eeEECCCCCCceEEEEEcCCceEEEEEcC-CCCCHHHHHHHHHHHHHhcccCCEEEEe
Confidence 999999999999999999999 45566777999999988865554433331 2222222221111 2457899999999
Q ss_pred ccccccchhHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHhhhhCCEEEeCHHHHHHhHH
Q 025807 162 SISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVKFETRYSCIQ 231 (248)
Q Consensus 162 g~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~w~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g 231 (248)
|+... +.+.+..+++.++++|+++++||++. .| ++++++|++++|+.|++.|+|
T Consensus 194 g~~~~---~~~~~~~~~~~a~~~g~~v~~D~~~~--~~-----------~~l~~~dil~pN~~Ea~~l~g 247 (352)
T 4e84_A 194 DYAKG---GLTHVTTMIEKARAAGKAVLVDPKGD--DW-----------ARYRGASLITPNRAELREVVG 247 (352)
T ss_dssp CCSSS---SCSSHHHHHHHHHHTTCEEEEECCSS--CC-----------STTTTCSEECCBHHHHHHHHC
T ss_pred CCCCC---CHHHHHHHHHHHHhcCCEEEEECCCc--ch-----------hhccCCcEEcCCHHHHHHHhC
Confidence 86421 12236788999999999999999863 23 367899999999999999987
No 42
>2jg1_A Tagatose-6-phosphate kinase; phosphoryl transfer, conformational changes, transferase, lactose metabolism; HET: MSE ANP TA6; 2.00A {Staphylococcus aureus} PDB: 2jgv_A* 2q5r_A*
Probab=99.93 E-value=9.2e-25 Score=186.36 Aligned_cols=185 Identities=12% Similarity=0.157 Sum_probs=144.6
Q ss_pred CCccEEEEcceeeeeccCCCCcccc---cCCCccccCCChHHHHHHHHHHcCCceeEEEeeCCCHHHHHHHHHHHHCCCC
Q 025807 27 YDRLVVCFGEMLIDFVPTVGGVSLA---EAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVD 103 (248)
Q Consensus 27 ~~~~ilviG~~~vD~~~~~~~~p~~---~~~~~~~~~GG~a~N~a~ala~lG~~v~l~~~vG~D~~g~~i~~~L~~~gI~ 103 (248)
.+|.++++|++++|++..++++... .+......+||+++|+|.+|++||.++.++|.+|+ .+|+.+++.|++.||+
T Consensus 19 ~~Mi~~v~G~~~~D~~~~~~~~~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~-~~G~~l~~~L~~~gV~ 97 (330)
T 2jg1_A 19 SHMILTLTLNPSVDISYPLTALKLDDVNRVQEVSKTAGGKGLNVTRVLAQVGEPVLASGFIGG-ELGQFIAKKLDHADIK 97 (330)
T ss_dssp SCCEEEEESSCEEEEEEEESCCCTTSEEEESCCEEEEECHHHHHHHHHHHHTCCEEEEEEEEH-HHHHHHHHHHHHTTCE
T ss_pred CcEEEEEecchhheEEEecCCccCCceEEeceEEEcCCchHHHHHHHHHHhCCCeEEEEEecc-hhHHHHHHHHHHCCCc
Confidence 4566779999999999988865211 34567789999999999999999999999999996 6999999999999999
Q ss_pred ccceEEcCCCCceEEEEEEecCCCceEEEecCCCcccccCcccchH------hhhcCccEEEEcccccccchhHHHHHHH
Q 025807 104 TSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDK------NLIKQGSIFHYGSISLIAEPCRSTQLAA 177 (248)
Q Consensus 104 ~~~v~~~~~~~T~~~~i~i~~~g~r~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~v~~~g~~~~~~~~~~~~~~~ 177 (248)
++++.+.+ .|++++++++++ +++++.. .++ .+++++++. +.++++|++|++|+... ..+.+.+..+
T Consensus 98 ~~~v~~~~--~t~~~~~~v~~~-~~~~~~~--~g~--~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~-~~~~~~~~~~ 169 (330)
T 2jg1_A 98 HAFYNIKG--ETRNCIAILHEG-QQTEILE--QGP--EIDNQEAAGFIKHFEQMMEKVEAVAISGSLPK-GLNQDYYAQI 169 (330)
T ss_dssp ECCEEESS--CCEEEEEEEETT-EEEEEEE--CCC--BCCHHHHHHHHHHHHHHGGGCSEEEEESCCCB-TSCTTHHHHH
T ss_pred eeEEEccC--CCeeEEEEEeCC-CcEEEEC--CCC--CCCHHHHHHHHHHHHHhcCCCCEEEEECCCCC-CCCHHHHHHH
Confidence 99987654 488888888765 6655443 333 245444431 23678999999886432 3445778889
Q ss_pred HHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHhhh---hCCEEEeCHHHHHHhHHH
Q 025807 178 MNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWD---QADIIKVKFETRYSCIQK 232 (248)
Q Consensus 178 ~~~a~~~g~~v~~D~~~~~~~w~~~~~~~~~~~~~l~---~~dil~~N~~E~~~l~g~ 232 (248)
++.++++|+++++||+. ..+.++++ ++|++++|++|++.|+|.
T Consensus 170 ~~~a~~~g~~v~~D~~~------------~~l~~~l~~~~~~dil~~N~~E~~~l~g~ 215 (330)
T 2jg1_A 170 IERCQNKGVPVILDCSG------------ATLQTVLENPYKPTVIKPNISELYQLLNQ 215 (330)
T ss_dssp HHHHHTTTCCEEEECCH------------HHHHHHHTSSSCCSEECCBHHHHHHHTTS
T ss_pred HHHHHHCCCEEEEECCc------------HHHHHHHhccCCceEEEeCHHHHHHHhCC
Confidence 99999999999999963 13455665 899999999999999864
No 43
>2f02_A Tagatose-6-phosphate kinase; LACC, structural genomics, PSI, protein structure initiative YORK SGX research center for structural genomics; HET: ATP; 1.90A {Enterococcus faecalis} SCOP: c.72.1.1 PDB: 2awd_A*
Probab=99.93 E-value=1.6e-24 Score=184.35 Aligned_cols=183 Identities=19% Similarity=0.177 Sum_probs=143.8
Q ss_pred CccEEEEcceeeeeccCCCCcccc----cCCCccccCCChHHHHHHHHHHcCCceeEEEeeCCCHHHHHHHHHHHHCCCC
Q 025807 28 DRLVVCFGEMLIDFVPTVGGVSLA----EAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVD 103 (248)
Q Consensus 28 ~~~ilviG~~~vD~~~~~~~~p~~----~~~~~~~~~GG~a~N~a~ala~lG~~v~l~~~vG~D~~g~~i~~~L~~~gI~ 103 (248)
+|.++|+|++++|++..+++ |.+ .+......+||+++|+|.+|++||.++.++|.+|+ .+|+.+++.|++.||+
T Consensus 2 ~m~i~v~g~~~~D~~~~v~~-~~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~~~~vG~-~~G~~i~~~L~~~gV~ 79 (323)
T 2f02_A 2 SLIVTVTMNPSIDISYLLDH-LKLDTVNRTSQVTKTPGGKGLNVTRVIHDLGGDVIATGVLGG-FHGAFIANELKKANIP 79 (323)
T ss_dssp CCEEEEESSCEEEEEEECSC-CCTTSEEEESCEEEEEESHHHHHHHHHHHHTCCEEEEEEEEH-HHHHHHHHHHHHTTCC
T ss_pred ceEEEEecCceeEEEEecCC-cccCCEEEeceEEEcCCcHHHHHHHHHHHcCCCeEEEEEecc-chHHHHHHHHHHCCCc
Confidence 36799999999999999887 433 34567789999999999999999999999999997 5999999999999999
Q ss_pred ccceEEcCCCCceEEEEEEecCCCceEEEecCCCcccccCcccchH------hhhcCccEEEEcccccccchhHHHHHHH
Q 025807 104 TSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDK------NLIKQGSIFHYGSISLIAEPCRSTQLAA 177 (248)
Q Consensus 104 ~~~v~~~~~~~T~~~~i~i~~~g~r~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~v~~~g~~~~~~~~~~~~~~~ 177 (248)
++++.+.+ .|++++++++++ +++++.. .++ .+++++++. +.++++|++|++|+... ..+.+.+..+
T Consensus 80 ~~~v~~~~--~t~~~~~~~~~~-~~~~~~~--~g~--~l~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~-~~~~~~~~~~ 151 (323)
T 2f02_A 80 QAFTSIKE--ETRDSIAILHEG-NQTEILE--AGP--TVSPEEISNFLENFDQLIKQAEIVTISGSLAK-GLPSDFYQEL 151 (323)
T ss_dssp BCCEEESS--CCEEEEEEEETT-EEEEEEE--CCC--BCCHHHHHHHHHHHHHHHTTCSEEEEESCCCB-TSCTTHHHHH
T ss_pred eeEEEcCC--CCeeEEEEEcCC-CeEEEEC--CCC--CCCHHHHHHHHHHHHHhccCCCEEEEECCCCC-CCChHHHHHH
Confidence 99987653 478887778765 6655443 333 255554432 24578999999886432 2345678889
Q ss_pred HHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHhh---hhCCEEEeCHHHHHHhHHH
Q 025807 178 MNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIW---DQADIIKVKFETRYSCIQK 232 (248)
Q Consensus 178 ~~~a~~~g~~v~~D~~~~~~~w~~~~~~~~~~~~~l---~~~dil~~N~~E~~~l~g~ 232 (248)
++.++++|+++++||+. . .+.+++ +++|++++|++|++.|+|.
T Consensus 152 ~~~a~~~g~~v~~Dp~~--------~----~~~~~l~~~~~~dil~~N~~E~~~l~g~ 197 (323)
T 2f02_A 152 VQKAHAQEVKVLLDTSG--------D----SLRQVLQGPWKPYLIKPNLEELEGLLGQ 197 (323)
T ss_dssp HHHHHHTTCEEEEECCT--------H----HHHHHHHSSCCCSEECCBHHHHHHHHTC
T ss_pred HHHHHHCCCEEEEECCh--------H----HHHHHHhccCCCeEEecCHHHHHHHhCC
Confidence 99999999999999973 1 233445 5899999999999999873
No 44
>2ajr_A Sugar kinase, PFKB family; TM0828, possible 1-phosphofructokinase (EC 2.7.1.56), struct genomics, joint center for structural genomics, JCSG; HET: MSE; 2.46A {Thermotoga maritima} SCOP: c.72.1.1
Probab=99.92 E-value=2.5e-25 Score=189.91 Aligned_cols=183 Identities=15% Similarity=0.201 Sum_probs=145.7
Q ss_pred CccEEEEcceeeeeccCCCCcccc----cC---CCccccCCChHHHHHHHHHHcCCceeEEEeeCCCHHHHHHHHHHHHC
Q 025807 28 DRLVVCFGEMLIDFVPTVGGVSLA----EA---PAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKEN 100 (248)
Q Consensus 28 ~~~ilviG~~~vD~~~~~~~~p~~----~~---~~~~~~~GG~a~N~a~ala~lG~~v~l~~~vG~D~~g~~i~~~L~~~ 100 (248)
.|.++|+|++++|++..+++ |.+ .+ ......+||+++|+|.+|++||.++.++|.+|+| +|+.+++.|+++
T Consensus 12 ~~~~~v~G~~~vD~~~~~~~-~~~g~~~~~s~~~~~~~~~GG~~~NvA~~la~LG~~~~~~~~vG~d-~G~~i~~~L~~~ 89 (331)
T 2ajr_A 12 HMVLTVTLNPALDREIFIED-FQVNRLYRINDLSKTQMSPGGKGINVSIALSKLGVPSVATGFVGGY-MGKILVEELRKI 89 (331)
T ss_dssp CCEEEEESSCEEEEEEECTT-CCSSCEEECCSGGGEEEEEESHHHHHHHHHHHTTCCEEEEEEEEHH-HHHHHHHHHHHH
T ss_pred ceEEEEecchHHeEEEEcCC-ccCCceEEeccccceEEecCcHHHHHHHHHHHcCCCeEEEEEecCc-hHHHHHHHHHHc
Confidence 58899999999999999887 433 33 6778899999999999999999999999999998 999999999999
Q ss_pred C--CCccceEEcCCCCceEEEEEEecCCCc-eEEEecCCCcccccCcccchH------hhhcCccEEEEcccccccchhH
Q 025807 101 N--VDTSGVRYDSTARTALAFVTLRADGER-EFLFFRHPSADMLLCESELDK------NLIKQGSIFHYGSISLIAEPCR 171 (248)
Q Consensus 101 g--I~~~~v~~~~~~~T~~~~i~i~~~g~r-~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~v~~~g~~~~~~~~~ 171 (248)
| |+++++.+.+ .|++++++++++|++ +++.. .++. +++++++. +.+++++++|++|... ...+.
T Consensus 90 g~~V~~~~v~~~~--~t~~~~~~v~~~g~~~~~~~~--~g~~--l~~~~~~~~~~~~~~~~~~~~~v~~~g~~~-~~~~~ 162 (331)
T 2ajr_A 90 SKLITTNFVYVEG--ETRENIEIIDEKNKTITAINF--PGPD--VTDMDVNHFLRRYKMTLSKVDCVVISGSIP-PGVNE 162 (331)
T ss_dssp CTTEEEEEEEESS--CCEEEEEEEETTTTEEEEEEC--CCCC--CCHHHHHHHHHHHHHHHTTCSEEEEESCCC-TTSCT
T ss_pred CCccceEEEEcCC--CCeEEEEEEeCCCceEEEEeC--CCCC--CCHHHHHHHHHHHHHhcccCCEEEEECCCC-CCCCH
Confidence 9 9999887654 488888888878888 54443 3332 45554432 2467899999987632 23345
Q ss_pred HHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHhhh---hCCEEEeCHHH-HHHhHH
Q 025807 172 STQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWD---QADIIKVKFET-RYSCIQ 231 (248)
Q Consensus 172 ~~~~~~~~~a~~~g~~v~~D~~~~~~~w~~~~~~~~~~~~~l~---~~dil~~N~~E-~~~l~g 231 (248)
+.+..+++.++++|+++++||+. . .+.++++ ++|++++|++| ++.|+|
T Consensus 163 ~~~~~~~~~a~~~g~~v~~D~~~--------~----~~~~~l~~~~~~dil~~N~~E~~~~l~g 214 (331)
T 2ajr_A 163 GICNELVRLARERGVFVFVEQTP--------R----LLERIYEGPEFPNVVKPDLRGNHASFLG 214 (331)
T ss_dssp THHHHHHHHHHHTTCEEEEECCH--------H----HHHHHHHSSCCCSEECCCCTTCCSCBTT
T ss_pred HHHHHHHHHHHHcCCEEEEECCh--------H----HHHHHHhcCCCCeEEEeCccchHHHHhC
Confidence 77889999999999999999963 1 2444555 49999999999 988876
No 45
>3umo_A 6-phosphofructokinase isozyme 2; glycolysis, transferase, PFK, enzyme; HET: ATP; 1.70A {Escherichia coli} PDB: 3n1c_A* 3cqd_A* 3ump_A* 3uqd_A* 3uqe_A*
Probab=99.92 E-value=3.4e-24 Score=181.09 Aligned_cols=183 Identities=20% Similarity=0.214 Sum_probs=144.9
Q ss_pred cEEEE-cceeeeeccCCCCccc---ccCCCccccCCChHHHHHHHHHHcCCceeEEEeeCCCHHHHHHHHHHHHCCCCcc
Q 025807 30 LVVCF-GEMLIDFVPTVGGVSL---AEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTS 105 (248)
Q Consensus 30 ~ilvi-G~~~vD~~~~~~~~p~---~~~~~~~~~~GG~a~N~a~ala~lG~~v~l~~~vG~D~~g~~i~~~L~~~gI~~~ 105 (248)
+|+++ +++++|++..+++++. ..+......+||+++|+|.+|++||.++.++|.||+| +|+.+++.|+++||+++
T Consensus 3 ~i~~v~~n~~~D~~~~v~~~~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~d-~g~~i~~~l~~~gv~~~ 81 (309)
T 3umo_A 3 RIYTLTLAPSLDSATITPQIYPEGKLRCTAPVFEPGGGGINVARAIAHLGGSATAIFPAGGA-TGEHLVSLLADENVPVA 81 (309)
T ss_dssp CEEEECSSCEEEEEEEESCCCSSSEEECCCCEEEEESHHHHHHHHHHHTTCCEEEEEEECHH-HHHHHHHHHHHTTCCEE
T ss_pred cEEEEecchhheEEEEcCcccCCCeEEeceeeecCCchHHHHHHHHHHcCCCeEEEEEecCc-hHHHHHHHHHHcCCceE
Confidence 36665 6899999999988732 1566788999999999999999999999999999999 99999999999999999
Q ss_pred ceEEcCCCCceEEEEEEec-CCCceEEEecCCCcccccCcccchH--h---hhcCccEEEEcccccccchhHHHHHHHHH
Q 025807 106 GVRYDSTARTALAFVTLRA-DGEREFLFFRHPSADMLLCESELDK--N---LIKQGSIFHYGSISLIAEPCRSTQLAAMN 179 (248)
Q Consensus 106 ~v~~~~~~~T~~~~i~i~~-~g~r~~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~v~~~g~~~~~~~~~~~~~~~~~ 179 (248)
++.+.+ +|+.++++++. +|+++++.+ .++. +++++++. + .+...+++|++|+ +....+.+.+..+++
T Consensus 82 ~v~~~~--~t~~~~~~~~~~~g~~~~~~~--~g~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~ 154 (309)
T 3umo_A 82 TVEAKD--WTRQNLHVHVEASGEQYRFVM--PGAA--LNEDEFRQLEEQVLEIESGAILVISGS-LPPGVKLEKLTQLIS 154 (309)
T ss_dssp EEECSS--CCCCCEEEEETTTCCEEEEEC--CCCC--CCHHHHHHHHHHHTTSCTTCEEEEESC-CCTTCCHHHHHHHHH
T ss_pred EEEecC--CCeeEEEEEECCCCcEEEEEc--CCCC--CCHHHHHHHHHHHHhcCCCCEEEEEcc-CCCCCCHHHHHHHHH
Confidence 887643 45555555554 788887776 3443 55554431 1 1357889999986 333456688899999
Q ss_pred HHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHhhhh--CCEEEeCHHHHHHhHHH
Q 025807 180 LAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQ--ADIIKVKFETRYSCIQK 232 (248)
Q Consensus 180 ~a~~~g~~v~~D~~~~~~~w~~~~~~~~~~~~~l~~--~dil~~N~~E~~~l~g~ 232 (248)
.++++|+++++||+. +.+.+++++ +|++++|++|++.|+|.
T Consensus 155 ~a~~~~~~v~~D~~~------------~~l~~~l~~~~~dil~~N~~E~~~l~g~ 197 (309)
T 3umo_A 155 AAQKQGIRCIVDSSG------------EALSAALAIGNIELVKPNQKELSALVNR 197 (309)
T ss_dssp HHHHTTCEEEEECCH------------HHHHHHTSSCCBSEECCBHHHHHHHHTS
T ss_pred HHHhcCCEEEEECCc------------HHHHHHhccCCCeEEEeCHHHHHHHhCC
Confidence 999999999999952 346677887 59999999999999874
No 46
>3cqd_A 6-phosphofructokinase isozyme 2; phosphofructokinases, PFK-2, glycolysis, transferase; HET: ATP; 1.98A {Escherichia coli} PDB: 3n1c_A*
Probab=99.92 E-value=2.1e-24 Score=182.37 Aligned_cols=182 Identities=19% Similarity=0.206 Sum_probs=140.8
Q ss_pred ccEEEE-cceeeeeccCCCCcccc----cCCCccccCCChHHHHHHHHHHcCCceeEEEeeCCCHHHHHHHHHHHHCCCC
Q 025807 29 RLVVCF-GEMLIDFVPTVGGVSLA----EAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVD 103 (248)
Q Consensus 29 ~~ilvi-G~~~vD~~~~~~~~p~~----~~~~~~~~~GG~a~N~a~ala~lG~~v~l~~~vG~D~~g~~i~~~L~~~gI~ 103 (248)
++|+++ |++++|++..++++ .+ .+......+||+++|+|.+|++||.++.++|.+|+| +|+.+++.|+++||+
T Consensus 2 ~~I~~v~g~~~~D~~~~~~~~-~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~d-~g~~i~~~l~~~gv~ 79 (309)
T 3cqd_A 2 VRIYTLTLAPSLDSATITPQI-YPEGKLRCTAPVFEPGGGGINVARAIAHLGGSATAIFPAGGA-TGEHLVSLLADENVP 79 (309)
T ss_dssp CCEEEECSSCEEEEEEEESCC-CSSSEEECCCCEEEEESHHHHHHHHHHHTTCCEEEEEEECHH-HHHHHHHHHHHTTCC
T ss_pred ceEEEEeccchheEEEEcCCC-cCCCeeeccceeecCCchHHHHHHHHHHcCCCeEEEEEecCc-hHHHHHHHHHHcCCC
Confidence 357755 69999999988873 32 445677899999999999999999999999999998 999999999999999
Q ss_pred ccceEEcCCCCceEEEEE-EecCCCceEEEecCCCcccccCcccchH------hhhcCccEEEEcccccccchhHHHHHH
Q 025807 104 TSGVRYDSTARTALAFVT-LRADGEREFLFFRHPSADMLLCESELDK------NLIKQGSIFHYGSISLIAEPCRSTQLA 176 (248)
Q Consensus 104 ~~~v~~~~~~~T~~~~i~-i~~~g~r~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~v~~~g~~~~~~~~~~~~~~ 176 (248)
++++.+.+ .|++++++ ++++|+++++.. .++. ++++.++. +.+++ +++|++|+.. ...+.+.+..
T Consensus 80 ~~~v~~~~--~t~~~~~~~~~~~g~~~~~~~--~g~~--~~~~~~~~~~~~~~~~~~~-~~v~~~g~~~-~~~~~~~~~~ 151 (309)
T 3cqd_A 80 VATVEAKD--WTRQNLHVHVEASGEQYRFVM--PGAA--LNEDEFRQLEEQVLEIESG-AILVISGSLP-PGVKLEKLTQ 151 (309)
T ss_dssp EEEEECSS--CCCCCEEEEETTTCCEEEEEC--CCCC--CCHHHHHHHHHHHHTSCTT-CEEEEESCCC-TTCCHHHHHH
T ss_pred ceeEEcCC--CCeeEEEEEEcCCCCEEEEEc--CCCC--CCHHHHHHHHHHHHHhhcC-CEEEEECCCC-CCCCHHHHHH
Confidence 99886653 36666666 777888866554 3332 44444331 23567 9999998643 3345678889
Q ss_pred HHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHH-hhhhC-CEEEeCHHHHHHhHHH
Q 025807 177 AMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMS-IWDQA-DIIKVKFETRYSCIQK 232 (248)
Q Consensus 177 ~~~~a~~~g~~v~~D~~~~~~~w~~~~~~~~~~~~-~l~~~-dil~~N~~E~~~l~g~ 232 (248)
+++.++++|+++++||+. . .+.+ +.+++ |++++|++|++.|+|.
T Consensus 152 ~~~~a~~~g~~v~~D~~~--------~----~~~~~l~~~~~dil~~N~~E~~~l~g~ 197 (309)
T 3cqd_A 152 LISAAQKQGIRCIVDSSG--------E----ALSAALAIGNIELVKPNQKELSALVNR 197 (309)
T ss_dssp HHHHHHTTTCEEEEECCH--------H----HHHHHTTTCCBSEECCBHHHHHHHHTS
T ss_pred HHHHHHHcCCeEEEECCh--------H----HHHHHHHhCCCEEEeeCHHHHHHHhCC
Confidence 999999999999999963 1 1233 33788 9999999999999874
No 47
>2abq_A Fructose 1-phosphate kinase; dimer, structural genomics, PSI, protein structure initiative; 2.10A {Bacillus halodurans} SCOP: c.72.1.1
Probab=99.91 E-value=3.3e-23 Score=174.87 Aligned_cols=180 Identities=18% Similarity=0.234 Sum_probs=142.7
Q ss_pred EEEEcceeeeeccCCCCcccc---cCCCccccCCChHHHHHHHHHHcCCceeEEEeeCCCHHHHHHHHHHHHCCCCccce
Q 025807 31 VVCFGEMLIDFVPTVGGVSLA---EAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGV 107 (248)
Q Consensus 31 ilviG~~~vD~~~~~~~~p~~---~~~~~~~~~GG~a~N~a~ala~lG~~v~l~~~vG~D~~g~~i~~~L~~~gI~~~~v 107 (248)
+.+.|++++|++..++++..- .+......+||+++|+|.+|++||.++.++|.+|+ .+|+.+++.|++.||+++++
T Consensus 3 ~tv~~n~~~D~~~~~~~~~~g~~~~~~~~~~~~GG~~~N~A~~la~LG~~~~~~~~vG~-~~g~~i~~~L~~~gv~~~~v 81 (306)
T 2abq_A 3 YTVTLNPSIDYIVQVENFQQGVVNRSERDRKQPGGKGINVSRVLKRLGHETKALGFLGG-FTGAYVRNALEKEEIGLSFI 81 (306)
T ss_dssp EEEESSCEEEEEEECTTCCSSSEEECSEEEEEEECHHHHHHHHHHHTTCCCEEEEEEEH-HHHHHHHHHHHHTTCEECCE
T ss_pred EEEecCchheEEEEcCCcccCCeEEeceeEecCCchHHHHHHHHHHcCCCceEEEEecc-hhHHHHHHHHHHcCCceEEE
Confidence 567899999999998875221 34567788999999999999999999999999998 89999999999999999999
Q ss_pred EEcCCCCceEEEEEEecCCCceEEEecCCCcccccCcccchH--hh---hcCccEEEEcccccccchhHHHHHHHHHHHH
Q 025807 108 RYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDK--NL---IKQGSIFHYGSISLIAEPCRSTQLAAMNLAK 182 (248)
Q Consensus 108 ~~~~~~~T~~~~i~i~~~g~r~~~~~~~~~~~~~~~~~~~~~--~~---~~~~~~v~~~g~~~~~~~~~~~~~~~~~~a~ 182 (248)
.+.+ .|++++++ .+|+++++.. .++ .+++++++. +. ++++|++|++|+.. ...+.+.+..+++.++
T Consensus 82 ~~~~--~t~~~~~~--~~g~~~~~~~--~g~--~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~-~~~~~~~~~~~~~~a~ 152 (306)
T 2abq_A 82 EVEG--DTRINVKI--KGKQETELNG--TAP--LIKKEHVQALLEQLTELEKGDVLVLAGSVP-QAMPQTIYRSMTQIAK 152 (306)
T ss_dssp EESS--CCEEEEEE--ESSSCEEEBC--CCC--CCCHHHHHHHHHHHTTCCTTCEEEEESCCC-TTSCTTHHHHHHHHHH
T ss_pred EcCC--CCceEEEE--eCCceEEEEC--CCC--CCCHHHHHHHHHHHHhccCCCEEEEecCCC-CCCCHHHHHHHHHHHH
Confidence 7653 47777665 4788865443 333 355554432 11 57899999988643 2344577888999999
Q ss_pred HCCCeEEEeCCCCCCCCCCHHHHHHHHHHhhh-hCCEEEeCHHHHHHhHHH
Q 025807 183 ESGSILSYDPNLRLPLWPSEEAAREGIMSIWD-QADIIKVKFETRYSCIQK 232 (248)
Q Consensus 183 ~~g~~v~~D~~~~~~~w~~~~~~~~~~~~~l~-~~dil~~N~~E~~~l~g~ 232 (248)
++|+++++||+. +.+.++++ ++|++++|++|+..|+|.
T Consensus 153 ~~g~~v~~D~~~------------~~~~~~l~~~~dil~~N~~E~~~l~g~ 191 (306)
T 2abq_A 153 ERGAFVAVDTSG------------EALHEVLAAKPSFIKPNHHELSELVSK 191 (306)
T ss_dssp TTTCEEEEECCH------------HHHHHHGGGCCSEECCBHHHHHHHHTS
T ss_pred hcCCEEEEECCh------------HHHHHHHhcCCcEEecCHHHHHHHhCC
Confidence 999999999962 24567888 999999999999999874
No 48
>3kd6_A Carbohydrate kinase, PFKB family; nucleoside kinase, AMP, PSI-II, NYSGXRC, struc genomics, protein structure initiative; HET: AMP; 1.88A {Chlorobaculum tepidum}
Probab=99.90 E-value=1.5e-23 Score=177.60 Aligned_cols=181 Identities=16% Similarity=0.194 Sum_probs=135.7
Q ss_pred CccEEEEcceeeeeccCCCCcccccCCCccccCCChHHHHHHHHHHcCC-ceeEEEeeCCCHHHHHHHHHHHHCCCCccc
Q 025807 28 DRLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGG-SSAFVGKLGDDEFGYMLANILKENNVDTSG 106 (248)
Q Consensus 28 ~~~ilviG~~~vD~~~~~~~~p~~~~~~~~~~~GG~a~N~a~ala~lG~-~v~l~~~vG~D~~g~~i~~~L~~~gI~~~~ 106 (248)
+|+|+|+|++++|++.... ......+||+++|+|.+|++||. ++.++|.||+| +|+.+++.|+++||++++
T Consensus 2 ~~~ilviG~~~iD~~~~~~-------~~~~~~~GG~~~NvA~~la~LG~~~~~~ig~vG~D-~g~~~~~~L~~~gVd~~~ 73 (313)
T 3kd6_A 2 SLSLLVIGSLAFDDIETPF-------GRSDNTLGGSSTYIALSASYFTDEPIRMVGVVGSD-FGKEHFDLLHAKNIDTRG 73 (313)
T ss_dssp -CCEEEESCCEEEEEECSS-------CEEEEEEECHHHHHHHHHTTTCSSCEEEEEEEETT-SCHHHHHHHHHTTEEEEE
T ss_pred CccEEEEeEEEEeeecCCC-------CcccccCCCHHHHHHHHHHHhCCCceEEEEecCCC-cHHHHHHHHHHcCCCccc
Confidence 3679999999999996532 23578999999999999999999 99999999999 999999999999999999
Q ss_pred eEEcCCCCceEEEEE--EecCCCceEEEecCCCcccccCcccchHhhhcCccEEEEcccccccchhHHHHHHHHHHHHHC
Q 025807 107 VRYDSTARTALAFVT--LRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKES 184 (248)
Q Consensus 107 v~~~~~~~T~~~~i~--i~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~a~~~ 184 (248)
+.+.++.+|....-. .+.++++++... .+....+.+. + .+.++++|++|++++ +.+....+++.+ ++
T Consensus 74 v~~~~~~~T~~~~g~~~~~~~~~~~~~~~--~~~~~~~~~~-~-~~~~~~~~~v~~~~~------~~~~~~~~~~~~-~~ 142 (313)
T 3kd6_A 74 IQVIEDGKTFRWAGRYHYDMNTRDTLDTQ--LNVFAEFDPH-V-PQYYRDSKFVCLGNI------DPELQLKVLDQI-DD 142 (313)
T ss_dssp EEEETTCCCEEEEEEECTTSSCEEEEEEE--CGGGTTCCCC-C-CGGGTTCSEEEECSS------CHHHHHHHHTTC-SS
T ss_pred eEEcCCCCeeeeeeeeeccccccceeecc--cchHhhcCcc-c-hHHHccCCEEEEcCC------CHHHHHHHHHHH-hh
Confidence 988776677432211 223444554433 3333334332 1 245789999999764 234455677777 67
Q ss_pred CCeEEEeCCCCCCCCCCHHHHHHHHHHhhhhCCEEEeCHHHHHHhHHH
Q 025807 185 GSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVKFETRYSCIQK 232 (248)
Q Consensus 185 g~~v~~D~~~~~~~w~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~ 232 (248)
+.++++||.. .|. +..++.+.++++++|++++|++|++.|+|.
T Consensus 143 ~~~v~~Dp~~---~~~--~~~~~~~~~~l~~~dil~~N~~E~~~l~g~ 185 (313)
T 3kd6_A 143 PKLVVCDTMN---FWI--EGKPEELKKVLARVDVFIVNDSEARLLSGD 185 (313)
T ss_dssp CSEEEEECCH---HHH--HHCHHHHHHHHTTCSEEEEEHHHHHHHHSC
T ss_pred CCEEEEcChh---hhh--hhhHHHHHHHHhcCCEEEeCHHHHHHHhCC
Confidence 8899999942 242 234667888999999999999999999873
No 49
>2jg5_A Fructose 1-phosphate kinase; 1-phosphofructokinase, transferase; 2.3A {Staphylococcus aureus}
Probab=99.90 E-value=7.8e-23 Score=172.44 Aligned_cols=181 Identities=15% Similarity=0.155 Sum_probs=140.5
Q ss_pred cEEEEcceeeeeccCCCCcccc---cCCCccccCCChHHHHHHHHHHcCCceeEEEeeCCCHHHHHHHHHHHHCCCCccc
Q 025807 30 LVVCFGEMLIDFVPTVGGVSLA---EAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSG 106 (248)
Q Consensus 30 ~ilviG~~~vD~~~~~~~~p~~---~~~~~~~~~GG~a~N~a~ala~lG~~v~l~~~vG~D~~g~~i~~~L~~~gI~~~~ 106 (248)
-+.+.|++++|++..++++... .+......+||+++|+|.+|++||.++.++|.+|+ .+|+.+++.|++.||++++
T Consensus 2 i~tvt~n~~~D~~~~~~~~~~g~~~~~~~~~~~~GG~~~N~A~~la~LG~~~~~~~~vG~-~~g~~i~~~l~~~gv~~~~ 80 (306)
T 2jg5_A 2 IYTVTFNPSIDYVIFTNDFKIDGLNRATATYKFAGGKGINVSRVLKTLDVESTALGFAGG-FPGKFIIDTLNNSAIQSNF 80 (306)
T ss_dssp EEEEESSCEEEEEEECSSCCTTSEEECSEEEEEEESHHHHHHHHHHHTTCCCEEEEEECH-HHHHHHHHHHHHTTCEECC
T ss_pred EEEEecCceEEEEEEcCCcccCceEEeceeEecCCchHHHHHHHHHHcCCCeeEEEEecC-cchHHHHHHHHHCCCceeE
Confidence 4678899999999998874211 44567788999999999999999999999999999 6999999999999999999
Q ss_pred eEEcCCCCceEEEEEEecCCCceEEEecCCCcccccCcccchH--h-h--hcCccEEEEcccccccchhHHHHHHHHHHH
Q 025807 107 VRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDK--N-L--IKQGSIFHYGSISLIAEPCRSTQLAAMNLA 181 (248)
Q Consensus 107 v~~~~~~~T~~~~i~i~~~g~r~~~~~~~~~~~~~~~~~~~~~--~-~--~~~~~~v~~~g~~~~~~~~~~~~~~~~~~a 181 (248)
+.+.+ .|++++++ .+|+++++.. .++. +++++++. + . ++++|++|++|+... ..+.+.+..+++.+
T Consensus 81 v~~~~--~t~~~~~~--~~g~~~~~~~--~g~~--~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~-~~~~~~~~~~~~~a 151 (306)
T 2jg5_A 81 IEVDE--DTRINVKL--KTGQETEINA--PGPH--ITSTQFEQLLQQIKNTTSEDIVIVAGSVPS-SIPSDAYAQIAQIT 151 (306)
T ss_dssp EECSS--CCEEEEEE--ESSSEEEEEC--CCCC--CCHHHHHHHHHHHTTCCTTCEEEEESCCCT-TSCTTHHHHHHHHH
T ss_pred EEcCC--CCeEEEEE--cCCCEEEEEC--CCCC--CCHHHHHHHHHHHHhccCCCEEEEeCCCCC-CCChHHHHHHHHHH
Confidence 87643 47777665 4788765544 3332 45554432 1 1 568999999886432 23446778899999
Q ss_pred HHCCCeEEEeCCCCCCCCCCHHHHHHHHHHhhh-hCCEEEeCHHHHHHhHHH
Q 025807 182 KESGSILSYDPNLRLPLWPSEEAAREGIMSIWD-QADIIKVKFETRYSCIQK 232 (248)
Q Consensus 182 ~~~g~~v~~D~~~~~~~w~~~~~~~~~~~~~l~-~~dil~~N~~E~~~l~g~ 232 (248)
+++|+++++|++. ..+.++++ ++|++++|++|++.|+|.
T Consensus 152 ~~~g~~v~~D~~~------------~~~~~~l~~~~dil~~N~~E~~~l~g~ 191 (306)
T 2jg5_A 152 AQTGAKLVVDAEK------------ELAESVLPYHPLFIKPNKDELEVMFNT 191 (306)
T ss_dssp HHHCCEEEEECCH------------HHHHHHGGGCCSEECCBHHHHHHHTTS
T ss_pred HHCCCEEEEECCh------------HHHHHHHhcCCeEEecCHHHHHHHhCC
Confidence 9999999999962 13456677 699999999999999863
No 50
>1vk4_A PFKB carbohydrate kinase TM0415; structural genomics, JCSG, protein structure initiative, joint center for structural G transferase; 1.91A {Thermotoga maritima} SCOP: c.72.1.1
Probab=99.84 E-value=4.5e-21 Score=161.26 Aligned_cols=174 Identities=18% Similarity=0.147 Sum_probs=129.8
Q ss_pred ccEEEEcceeeeeccCCCCcccccCCCccccCCChHHHHHHHHHHcCCceeEEEeeCCCHHHHHHHHHHHHCCCCccceE
Q 025807 29 RLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVR 108 (248)
Q Consensus 29 ~~ilviG~~~vD~~~~~~~~p~~~~~~~~~~~GG~a~N~a~ala~lG~~v~l~~~vG~D~~g~~i~~~L~~~gI~~~~v~ 108 (248)
..|.++|.+..|.+.+.. .....+||+++|+|.+|++||.++.++|.||+|. +.+++.|++.||+++++.
T Consensus 12 ~~~~~~~~~~~~~~~~~~--------~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~--~~~~~~L~~~gVd~~~v~ 81 (298)
T 1vk4_A 12 HMITFIGHVSKDVNVVDG--------KREIAYGGGVVMGAITSSLLGVKTKVITKCTRED--VSKFSFLRDNGVEVVFLK 81 (298)
T ss_dssp SEEEEECCCEEEEEEETT--------EEEEEEECHHHHHHHHHHHTTCEEEEEEEECTTT--GGGGTTTGGGTCEEEEEE
T ss_pred eeEEEeccccCceEeecC--------eEEEecCCHHHHHHHHHHHcCCceEEEEEEcCCH--HHHHHHHHHcCCceEEEe
Confidence 458899999999887753 4578999999999999999999999999999997 789999999999999875
Q ss_pred EcCCCCceEEEEEEecCCCceEEEecCCCcccccCcccchHhhhcCccEEEEcccccccchhHHHHHHHHHHHHHCCCeE
Q 025807 109 YDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSIL 188 (248)
Q Consensus 109 ~~~~~~T~~~~i~i~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~a~~~g~~v 188 (248)
. ..+|+.+.++ +++|+++++... ++...++++++.. ..++++|++++.. .+.. .++++.++++|+++
T Consensus 82 ~--~~~t~~~~i~-~~~g~~~~~~~~--~~~~~l~~~~~~~---~~~~~v~~~~~~~-~~~~----~~~~~~~~~~g~~v 148 (298)
T 1vk4_A 82 S--PRTTSIENRY-GSDPDTRESFLI--SAADPFTESDLAF---IEGEAVHINPLWY-GEFP----EDLIPVLRRKVMFL 148 (298)
T ss_dssp C--SSCEEEEEEC------CCEEEEE--ECCCCCCGGGGGG---CCSSEEEECCSST-TSSC----GGGHHHHHHHCSEE
T ss_pred c--CCCcEEEEEE-cCCCCeeEEEec--cccccCCHHHcCc---CCCCEEEECCccc-cccc----HHHHHHHHHcCCEE
Confidence 3 3466666554 557888877653 3444566665532 6899999998743 2222 35677788889999
Q ss_pred EEeCCCC----------CCCCCCHHHHHHHHHHhhhhCCEEEeCHHHHHHhHHH
Q 025807 189 SYDPNLR----------LPLWPSEEAAREGIMSIWDQADIIKVKFETRYSCIQK 232 (248)
Q Consensus 189 ~~D~~~~----------~~~w~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~ 232 (248)
++|++.. ...|. .+.++++++|++++|++|++.|+|.
T Consensus 149 ~~D~~~~~~~~~~~~~~~~~~~-------~~~~~l~~~dil~~N~~E~~~l~g~ 195 (298)
T 1vk4_A 149 SADAQGFVRVPENEKLVYRDWE-------MKEKYLKYLDLFKVDSREAETLTGT 195 (298)
T ss_dssp EEETHHHHEEEETTEEEECCCT-------THHHHGGGCSEEEEEHHHHHHHHSC
T ss_pred EEecCccccccccccccccchH-------HHHhhcccCCEEecCHHHHHHHhCC
Confidence 9999731 11232 3567889999999999999999873
No 51
>2yxt_A Pyridoxal kinase; beta sheet with alpha helix, metal ION, transferase; 2.00A {Homo sapiens} PDB: 2yxu_A* 3kbi_A* 3keu_A* 4en4_A* 4eoh_A* 2f7k_A 3fhy_A* 3fhx_A* 2ajp_A* 1lhp_A 1lhr_A* 1rft_A* 1rfu_A* 1rfv_A* 1ygj_A* 1ygk_A* 1yhj_A*
Probab=98.96 E-value=3.8e-10 Score=94.96 Aligned_cols=130 Identities=16% Similarity=0.105 Sum_probs=87.6
Q ss_pred ceeEEEeeCCCHHHHHHHHHHHHCCCCccceEEc--CCCCceEEEEEEecCCCceEEEecCCCcccccCcccchH--hh-
Q 025807 77 SSAFVGKLGDDEFGYMLANILKENNVDTSGVRYD--STARTALAFVTLRADGEREFLFFRHPSADMLLCESELDK--NL- 151 (248)
Q Consensus 77 ~v~l~~~vG~D~~g~~i~~~L~~~gI~~~~v~~~--~~~~T~~~~i~i~~~g~r~~~~~~~~~~~~~~~~~~~~~--~~- 151 (248)
.+.++|.||+|. |+++ |+++||+++++.+. .+ +|+..+ . .+ ..++++++.. +.
T Consensus 12 ~~~~~g~vG~D~-g~~i---L~~~GV~~~~v~~~~~~~-~t~~~~-------------~--~g--~~l~~~~i~~~~~~~ 69 (312)
T 2yxt_A 12 SHVIRGYVGNRA-ATFP---LQVLGFEIDAVNSVQFSN-HTGYAH-------------W--KG--QVLNSDELQELYEGL 69 (312)
T ss_dssp EEESSSCSTHHH-HHHH---HHHTTCEEEEEEEEEESS-CTTSSC-------------C--CE--EECCHHHHHHHHHHH
T ss_pred cccCCCccchHh-hHHH---HHHcCCeEEEEEEEEecC-CCCcCC-------------c--cC--ccCCHHHHHHHHHHH
Confidence 467889999998 9988 99999999887652 11 222111 1 11 1234444431 11
Q ss_pred ----hcCccEEEEcccccccchhHHHHHHHHHHHHHCCCe--EEEeCCCCCC------CCCCHHHHHHHHHH-hhhhCCE
Q 025807 152 ----IKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSI--LSYDPNLRLP------LWPSEEAAREGIMS-IWDQADI 218 (248)
Q Consensus 152 ----~~~~~~v~~~g~~~~~~~~~~~~~~~~~~a~~~g~~--v~~D~~~~~~------~w~~~~~~~~~~~~-~l~~~di 218 (248)
+++++++|++.. .++...+.+.++++.++++|.+ +++||+.+.. .|.. +.+++.+.+ +++++|+
T Consensus 70 ~~~~~~~~~~v~~G~~--~~~~~~~~~~~~~~~a~~~g~~~~vv~Dp~~~~~~~~sg~~~~~-~~~~~~l~~~ll~~~di 146 (312)
T 2yxt_A 70 RLNNMNKYDYVLTGYT--RDKSFLAMVVDIVQELKQQNPRLVYVCDPVLGDKWDGEGSMYVP-EDLLPVYKEKVVPLADI 146 (312)
T ss_dssp HHTTCCCCSEEEECCC--CCHHHHHHHHHHHHHHHHHCTTCEEEECCCCEEC--CCCEESSC-TTHHHHHHHTTGGGCSE
T ss_pred HhcCCccCCEEEECCC--CCHHHHHHHHHHHHHHHhhCCCCeEEECCCcCCCCCCCCCeeCC-HHHHHHHHHHhhhhCCE
Confidence 567999886543 2333456677889999988854 8999986543 3432 234566665 8999999
Q ss_pred EEeCHHHHHHhHH
Q 025807 219 IKVKFETRYSCIQ 231 (248)
Q Consensus 219 l~~N~~E~~~l~g 231 (248)
+++|+.|++.|+|
T Consensus 147 l~pN~~Ea~~L~g 159 (312)
T 2yxt_A 147 ITPNQFEAELLSG 159 (312)
T ss_dssp ECCCHHHHHHHHS
T ss_pred EcCCHHHHHHHhC
Confidence 9999999999987
No 52
>2ddm_A Pyridoxine kinase; pyridoxal kinase, ribokinase, pyridoxal 5'-phosphate, vitamin B6, phosphorylation, transferase; 2.10A {Escherichia coli} PDB: 2ddo_A* 2ddw_A*
Probab=98.82 E-value=2.7e-09 Score=88.50 Aligned_cols=137 Identities=10% Similarity=0.066 Sum_probs=88.1
Q ss_pred cCCceeE-EEeeCCCHHHHHHHHHHHHCCCCccceEEcCCCCceEEEEEEecCCCceEEEecCCCcccccCcccchH---
Q 025807 74 LGGSSAF-VGKLGDDEFGYMLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDK--- 149 (248)
Q Consensus 74 lG~~v~l-~~~vG~D~~g~~i~~~L~~~gI~~~~v~~~~~~~T~~~~i~i~~~g~r~~~~~~~~~~~~~~~~~~~~~--- 149 (248)
|+..... +|.+|.| ..++.|++.||++.++.+ . +..+.+|.+.+. + ..++++.+..
T Consensus 19 L~i~~~~~~g~~G~d----~~~~~l~~~Gv~~~~v~t--------~-i~~~~~g~~~~~-----g--~~~~~~~~~~~~~ 78 (283)
T 2ddm_A 19 VAVQSQVVYGSVGNS----IAVPAIKQNGLNVFAVPT--------V-LLSNTPHYDTFY-----G--GAIPDEWFSGYLR 78 (283)
T ss_dssp EEEEEEESSSSSTHH----HHHHHHHHTTCCEEEEEE--------E-EESSCTTSSCCC-----E--EECCHHHHHHHHH
T ss_pred EEEecccCCCcchHH----HHHHHHHHcCCeeeEEeE--------E-EeccCCCcCcee-----e--eeCCHHHHHHHHH
Confidence 3444343 6677776 245789999999887742 1 222445555421 1 1233333321
Q ss_pred ---h--hhcCccEEEEcccccccchhHHHHHHHHHHHHH--CCCeEEEeCCCCC---CCCCCHHHHHHHHHHhhhhCCEE
Q 025807 150 ---N--LIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKE--SGSILSYDPNLRL---PLWPSEEAAREGIMSIWDQADII 219 (248)
Q Consensus 150 ---~--~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~a~~--~g~~v~~D~~~~~---~~w~~~~~~~~~~~~~l~~~dil 219 (248)
+ .+++++++|++.+.. ....+.+.++++.+++ +|+++++||+.+. ..|.+.+.......++++++|++
T Consensus 79 ~l~~~~~~~~~~~v~~G~l~~--~~~~~~~~~~l~~a~~~~~g~~vv~Dp~~~~~~~~~~~~~~~~~~~~~~ll~~~dil 156 (283)
T 2ddm_A 79 ALQERDALRQLRAVTTGYMGT--ASQIKILAEWLTALRKDHPDLLIMVDPVIGDIDSGIYVKPDLPEAYRQYLLPLAQGI 156 (283)
T ss_dssp HHHHTTCCTTCCEEEECCCSC--HHHHHHHHHHHHHHHTTCTTCEEEECCCCEETTTEECSCTTHHHHHHHTTGGGCSEE
T ss_pred HHHhcCCcccCCEEEECCcCC--HHHHHHHHHHHHHHHhcCCCCeEEECCcccCCCCCcccCHHHHHHHHHhhhhhceEe
Confidence 1 345789999976432 2345778888998888 7999999998664 34543222233335689999999
Q ss_pred EeCHHHHHHhHHH
Q 025807 220 KVKFETRYSCIQK 232 (248)
Q Consensus 220 ~~N~~E~~~l~g~ 232 (248)
++|+.|++.|+|.
T Consensus 157 ~pN~~E~~~L~g~ 169 (283)
T 2ddm_A 157 TPNIFELEILTGK 169 (283)
T ss_dssp CCBHHHHHHHHTS
T ss_pred cCCHHHHHHHhCC
Confidence 9999999999874
No 53
>1jxh_A Phosphomethylpyrimidine kinase; THID, ribokinase family, phophorylation, transferase; 2.30A {Salmonella typhimurium} SCOP: c.72.1.2 PDB: 1jxi_A*
Probab=98.20 E-value=2.9e-06 Score=70.32 Aligned_cols=71 Identities=14% Similarity=0.103 Sum_probs=52.8
Q ss_pred ccEEEEcccccccchhHHHHHHHHHHHHHCCCe-EEEeCCCCC----CCCCCHHHHHHHHHH-hhhhCCEEEeCHHHHHH
Q 025807 155 GSIFHYGSISLIAEPCRSTQLAAMNLAKESGSI-LSYDPNLRL----PLWPSEEAAREGIMS-IWDQADIIKVKFETRYS 228 (248)
Q Consensus 155 ~~~v~~~g~~~~~~~~~~~~~~~~~~a~~~g~~-v~~D~~~~~----~~w~~~~~~~~~~~~-~l~~~dil~~N~~E~~~ 228 (248)
+|+++++.. . +.+.+..+++.+++.+++ +++||..+. .+|. +...+.+.+ +++++|++++|+.|++.
T Consensus 95 ~~~v~~G~l---~--~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~g~~l~~--~~~~~~l~~~ll~~~dil~pN~~Ea~~ 167 (288)
T 1jxh_A 95 IDTTKIGML---A--ETDIVEAVAERLQRHHVRNVVLDTVMLAKSGDPLLS--PSAIETLRVRLLPQVSLITPNLPEAAA 167 (288)
T ss_dssp CSEEEECCC---C--SHHHHHHHHHHHHHTTCCSEEEECCCC------CCC--HHHHHHHHHHTGGGCSEEECBHHHHHH
T ss_pred CCEEEECCC---C--CHHHHHHHHHHHHHCCCCeEEEcCcccCCCCCccCC--HHHHHHHHHHHHhhCcEEcCCHHHHHH
Confidence 688877643 1 457778889999999996 999998763 2453 223344554 88999999999999999
Q ss_pred hHHH
Q 025807 229 CIQK 232 (248)
Q Consensus 229 l~g~ 232 (248)
|+|.
T Consensus 168 L~g~ 171 (288)
T 1jxh_A 168 LLDA 171 (288)
T ss_dssp HHTC
T ss_pred HcCC
Confidence 9874
No 54
>3drw_A ADP-specific phosphofructokinase; AMP, GLYC kinase, magnesium, metal-binding, transferase, structural G PSI-2, protein structure initiative; HET: AMP; 1.90A {Pyrococcus horikoshii} PDB: 1u2x_A
Probab=98.11 E-value=4.9e-05 Score=66.64 Aligned_cols=163 Identities=11% Similarity=0.048 Sum_probs=101.6
Q ss_pred cccCCChHHHHHHHHHHcCC-ceeEEEeeCCCHHHHHHHHHHHHCCC-------------------------CccceEEc
Q 025807 57 KKAPGGAPANVAVGISRLGG-SSAFVGKLGDDEFGYMLANILKENNV-------------------------DTSGVRYD 110 (248)
Q Consensus 57 ~~~~GG~a~N~a~ala~lG~-~v~l~~~vG~D~~g~~i~~~L~~~gI-------------------------~~~~v~~~ 110 (248)
....||.|.-+|..|+.+|. +|.+.+..+.....+. | ..+| +..+|-.
T Consensus 113 ~~~~GGnA~imAn~La~lg~~~Vi~~~p~~sk~~~~l----l-~~~i~~p~~e~g~l~l~~~~ea~~~~~~~~iH~I~E- 186 (474)
T 3drw_A 113 EERLGGQAGIIANTLAGLKIRKVIAYTPFLPKRLAEL----F-KKGVLYPVVENGELQFKPIQEAYREGDPLKINRIFE- 186 (474)
T ss_dssp EEEEESHHHHHHHHHHHTTCSEEEECCSCCCHHHHTT----S-CTTEEEEEESSSSEEEEEGGGCCCTTCCCCEEEEEE-
T ss_pred eEecCChHHHHHHHHHHcCCCcEEEecCcCCHHHHHh----c-CCcceeecccCCceeecCchhhhccCCCCCcEEEEE-
Confidence 45799999999999999999 4777777766543332 2 2222 1111111
Q ss_pred CCCCceEEEE----EE-ecCCCceEEEecCCCc-ccccCcccch---HhhhcCccEEEEcccccccc---------hhHH
Q 025807 111 STARTALAFV----TL-RADGEREFLFFRHPSA-DMLLCESELD---KNLIKQGSIFHYGSISLIAE---------PCRS 172 (248)
Q Consensus 111 ~~~~T~~~~i----~i-~~~g~r~~~~~~~~~~-~~~~~~~~~~---~~~~~~~~~v~~~g~~~~~~---------~~~~ 172 (248)
.+.|..+- -+ .+...|-++.++.... ... ..+.+. .+..+.+|.+.++|+.++.+ ...+
T Consensus 187 --y~~G~~~~~~~~~~~aPraNRfI~s~D~~N~~~l~-~~e~f~~~l~e~~~~~d~~vLSGlq~m~~~y~dg~~~~~~l~ 263 (474)
T 3drw_A 187 --FRKGLKFKLGDETIEIPNSGRFIVSARFESISRIE-TREDIKPFLGEIGKEVDGAIFSGYQGLRTKYSDGKDANYYLR 263 (474)
T ss_dssp --ECTTCEEESSSCEEECCSCEEEEEEECCSGGGCCS-CCTTTGGGHHHHHHHCSEEEECCGGGCCSBCTTSCBHHHHHH
T ss_pred --cCCCCeeecCCceEEccCCCeEEEEcCCCCHHhcc-ccHHHHHHHHHhhcCCCEEEEeccccccccccccccHHHHHH
Confidence 11222222 11 1222233444433322 222 233343 23334799999999987654 2234
Q ss_pred HHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHhhhhCCEEEeCHHHHHHhHHH
Q 025807 173 TQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVKFETRYSCIQK 232 (248)
Q Consensus 173 ~~~~~~~~a~~~g~~v~~D~~~~~~~w~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~ 232 (248)
...+.++..+..+++|-+...+ ..+.+-.+..+..+++++|.+=+||.|+..+.+.
T Consensus 264 ~~~e~i~~l~~~~~~iH~E~As----~~~~~l~~~i~~~i~p~vDSlGmNEqELa~l~~~ 319 (474)
T 3drw_A 264 RAKEDIIEFKEKDVKIHVEFAS----VQDRKLRKKIITNILPFVDSVGIDEAEIAQILSV 319 (474)
T ss_dssp HHHHHHHHHHHTTCEEEEECCC----CSCHHHHHHHHHHTGGGSSEEEEEHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCeEEEEeCc----cccHHHHHHHHHHhcccccccccCHHHHHHHHHH
Confidence 4446666677899999999987 3456666677778999999999999999999875
No 55
>1ub0_A THID, phosphomethylpyrimidine kinase; thiamin biosynthesis, ribokinase family, phosphorylati structural genomics; 2.05A {Thermus thermophilus} SCOP: c.72.1.2
Probab=97.97 E-value=1.5e-05 Score=64.73 Aligned_cols=72 Identities=14% Similarity=0.116 Sum_probs=50.1
Q ss_pred CccEEEEcccccccchhHHHHHHHHHHHHHCC-CeEEEeCCCCCC----CCCCHHHHHHHH-HHhhhhCCEEEeCHHHHH
Q 025807 154 QGSIFHYGSISLIAEPCRSTQLAAMNLAKESG-SILSYDPNLRLP----LWPSEEAAREGI-MSIWDQADIIKVKFETRY 227 (248)
Q Consensus 154 ~~~~v~~~g~~~~~~~~~~~~~~~~~~a~~~g-~~v~~D~~~~~~----~w~~~~~~~~~~-~~~l~~~dil~~N~~E~~ 227 (248)
+.+.++++.+ . +.+....+++.+++.+ +++++||+.+.. +|. +...+.+ .++++++|++++|+.|++
T Consensus 70 ~~~~v~~G~l--~---~~~~~~~~~~~~~~~~~~~vv~Dp~~~~~~g~~l~~--~~~~~~~~~~ll~~~dil~pN~~E~~ 142 (258)
T 1ub0_A 70 PLHAAKTGAL--G---DAAIVEAVAEAVRRFGVRPLVVDPVMVAKSGDPLLA--KEAAAALKERLFPLADLVTPNRLEAE 142 (258)
T ss_dssp CCSEEEECCC--C---SHHHHHHHHHHHHHTTCCSEEECCCC---------C--HHHHHHHHHHTGGGCSEECCBHHHHH
T ss_pred CCCEEEECCc--C---CHHHHHHHHHHHHhCCCCcEEECCeeecCCCCcccC--hHHHHHHHHhhcccCeEEeCCHHHHH
Confidence 4678877642 1 3466777888888888 899999986543 343 1223344 468899999999999999
Q ss_pred HhHHH
Q 025807 228 SCIQK 232 (248)
Q Consensus 228 ~l~g~ 232 (248)
.|+|.
T Consensus 143 ~L~g~ 147 (258)
T 1ub0_A 143 ALLGR 147 (258)
T ss_dssp HHHCS
T ss_pred HHhCC
Confidence 99873
No 56
>3mbh_A Putative phosphomethylpyrimidine kinase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE PXL; 2.00A {Bacteroides thetaiotaomicron} PDB: 3mbj_A*
Probab=97.80 E-value=4.2e-05 Score=63.50 Aligned_cols=77 Identities=14% Similarity=0.122 Sum_probs=59.4
Q ss_pred CccEEEEcccccccchhHHHHHHHHHHHHHCCCeEEEeCCCCCC--CCC-CHHHHHHHHHHhhhhCCEEEeCHHHHHHhH
Q 025807 154 QGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLP--LWP-SEEAAREGIMSIWDQADIIKVKFETRYSCI 230 (248)
Q Consensus 154 ~~~~v~~~g~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~--~w~-~~~~~~~~~~~~l~~~dil~~N~~E~~~l~ 230 (248)
..|.+.++. +.+....+.+.++++++++.++++++||..+.. +|. ..+...+.++++++++|++++|+.|++.|+
T Consensus 77 ~~~aik~G~--l~s~~~i~~v~~~l~~~~~~~~~vv~DPv~~~~g~l~~~~~~~~~~~~~~ll~~adiitpN~~Ea~~L~ 154 (291)
T 3mbh_A 77 QFDAIYTGY--LGSPRQIQIVSDFIKDFRQPDSLIVADPVLGDNGRLYTNFDMEMVKEMRHLITKADVITPNLTELFYLL 154 (291)
T ss_dssp CCSEEEECC--CSSTTHHHHHHHHHHHHCCTTCEEEECCCCEETTEECTTCCHHHHHHHHHHGGGCSEECCBHHHHHHHH
T ss_pred ccCEEEECC--CCCHHHHHHHHHHHHHhcCCCCcEEECceeeeCCCCCCCCCHHHHHHHHHHhccCCEEeCCHHHHHHHh
Confidence 678888863 334445677888888887778999999987653 354 224566778889999999999999999998
Q ss_pred HH
Q 025807 231 QK 232 (248)
Q Consensus 231 g~ 232 (248)
|.
T Consensus 155 g~ 156 (291)
T 3mbh_A 155 DE 156 (291)
T ss_dssp TC
T ss_pred CC
Confidence 74
No 57
>1ua4_A Glucokinase, ADP-dependent glucokinase; transferase; HET: GLC BGC AMP; 1.90A {Pyrococcus furiosus} SCOP: c.72.1.3
Probab=97.78 E-value=7.3e-05 Score=65.50 Aligned_cols=161 Identities=11% Similarity=0.127 Sum_probs=96.9
Q ss_pred cCCChHHHHHHHHHHcCCceeE--EEeeCCCHHHHHHHHHHHHCCCCccceEE-------------cCCCCceEEEEEEe
Q 025807 59 APGGAPANVAVGISRLGGSSAF--VGKLGDDEFGYMLANILKENNVDTSGVRY-------------DSTARTALAFVTLR 123 (248)
Q Consensus 59 ~~GG~a~N~a~ala~lG~~v~l--~~~vG~D~~g~~i~~~L~~~gI~~~~v~~-------------~~~~~T~~~~i~i~ 123 (248)
..||.|..+|..++.+|.++.+ ++.+|.. ..+.|...+|.. ... ....+...-+|+=-
T Consensus 109 ~~GGnA~imAn~la~lg~~~vl~~~~~l~~~-----~~~lf~~~~i~~--p~~~~~~~~l~~~~e~~~~~~~~iH~I~Ef 181 (455)
T 1ua4_A 109 RMGGQAGIMANLLGGVYGVPVIVHVPQLSRL-----QANLFLDGPIYV--PTLENGEVKLIHPKEFSGDEENCIHYIYEF 181 (455)
T ss_dssp EEESHHHHHHHHHTTTTCCCEEECCSCCCHH-----HHTTSCSSSEEE--EEEETTEEEEECGGGCSCCCCCCEEEEEEE
T ss_pred ccCCcHHHHHHHHHHcCCCEEEEeCCCCCHH-----HHHhcCCCCeEe--ecccCCccccccchhhccCCCCCceEEEEc
Confidence 8999999999999999999877 6666653 333343233332 111 00123333433322
Q ss_pred cCCC----------ceEEEe-cCCCcccccCcccchH---hhhcCccEEEEcccccccchh----HHHHHHHHHHHHHCC
Q 025807 124 ADGE----------REFLFF-RHPSADMLLCESELDK---NLIKQGSIFHYGSISLIAEPC----RSTQLAAMNLAKESG 185 (248)
Q Consensus 124 ~~g~----------r~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~v~~~g~~~~~~~~----~~~~~~~~~~a~~~g 185 (248)
+.|+ .+++.. +...... ...+.+.. +...++|.+.++|+.++.+.+ .+...+.++.....+
T Consensus 182 ~~G~~~~~~~aPraNRfI~s~D~~n~~l-~~~e~f~~~l~e~~~~~dl~vlSG~q~l~~~~~~~~~~~~l~~i~~L~~~~ 260 (455)
T 1ua4_A 182 PRGFRVFEFEAPRENRFIGSADDYNTTL-FIREEFRESFSEVIKNVQLAILSGLQALTKENYKEPFEIVKSNLEVLNERE 260 (455)
T ss_dssp CTTCEETTEECSSCEEEEEECCSSGGGT-CCCGGGSTTHHHHGGGCSEEEECCGGGCCTTTCHHHHHHHHHHHHHHHHTT
T ss_pred CCCCeecceeccccceeEEecCCCcccC-cccHHHHHHHHhhccCCcEEEEechhcccccchHHHHHHHHHHHHHhcCCC
Confidence 3343 233333 2221211 12233321 233569999999998865532 222223223446788
Q ss_pred CeEEEeCCCCCCCCCCHHHHHHHHHHhhhhCCEEEeCHHHHHHhHHH
Q 025807 186 SILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVKFETRYSCIQK 232 (248)
Q Consensus 186 ~~v~~D~~~~~~~w~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~ 232 (248)
+++-+++... .+.+..+..+ .+++++|.+-+||.|+..+.+.
T Consensus 261 ~~iH~ElAs~----~~~~~~~~i~-~ilp~vDSlGmNE~EL~~l~~~ 302 (455)
T 1ua4_A 261 IPVHLEFAFT----PDEKVREEIL-NVLGMFYSVGLNEVELASIMEI 302 (455)
T ss_dssp CCEEEECCCC----CCHHHHHHHH-HHGGGCSEEEECHHHHHHHHHH
T ss_pred ceEEEEeCCc----cCHHHHHHHH-hhhccCcccccCHHHHHHHHHH
Confidence 9999999873 3555546666 9999999999999999988764
No 58
>2i5b_A Phosphomethylpyrimidine kinase; ADP complex, PDXK, THID, ribokinase superfamily, transferase; HET: ADP; 2.80A {Bacillus subtilis}
Probab=97.69 E-value=0.00014 Score=59.45 Aligned_cols=74 Identities=11% Similarity=-0.049 Sum_probs=54.8
Q ss_pred CccEEEEcccccccchhHHHHHHHHHHHHHCCC-eEEEeCCCCCCCCCC--HHHHHHHHH-HhhhhCCEEEeCHHHHHHh
Q 025807 154 QGSIFHYGSISLIAEPCRSTQLAAMNLAKESGS-ILSYDPNLRLPLWPS--EEAAREGIM-SIWDQADIIKVKFETRYSC 229 (248)
Q Consensus 154 ~~~~v~~~g~~~~~~~~~~~~~~~~~~a~~~g~-~v~~D~~~~~~~w~~--~~~~~~~~~-~~l~~~dil~~N~~E~~~l 229 (248)
+.|.++++.+ . +.+....+++.+++.+. ++++||+.+...|.. .+...+.+. ++++++|++++|+.|++.|
T Consensus 74 ~~d~v~~G~l--~---~~~~~~~~~~~~~~~~~~~vv~Dp~~~~~~~~~~~~~~~~~~l~~~ll~~~diltpN~~E~~~L 148 (271)
T 2i5b_A 74 GVDAMKTGML--P---TVDIIELAAKTIKEKQLKNVVIDPVMVCKGANEVLYPEHAQALREQLAPLATVITPNLFEASQL 148 (271)
T ss_dssp CCSEEEECCC--C---SHHHHHHHHHHHHHTTCSSEEECCCCSSBCSSSBSSHHHHHHHHHHTGGGCSEECCBHHHHHHH
T ss_pred CCCEEEECCC--C---CHHHHHHHHHHHHhCCCCCEEEcCCcCCCCCCcCcCHHHHHHHHHHhHhhCcEEcCCHHHHHHH
Confidence 6788888642 1 24677788888889898 599999877654432 122344554 7889999999999999999
Q ss_pred HHH
Q 025807 230 IQK 232 (248)
Q Consensus 230 ~g~ 232 (248)
+|.
T Consensus 149 ~g~ 151 (271)
T 2i5b_A 149 SGM 151 (271)
T ss_dssp HTC
T ss_pred hCC
Confidence 874
No 59
>1gc5_A ADP-dependent glucokinase; ALFA/beta sandwichs, induced-fitting, transferase; HET: ADP; 2.30A {Thermococcus litoralis} SCOP: c.72.1.3
Probab=97.60 E-value=0.00057 Score=59.91 Aligned_cols=159 Identities=8% Similarity=0.100 Sum_probs=93.7
Q ss_pred cCCChHHHHHHHHHHcCCceeE--EEeeCCCHHHHHHHHHHHHCCCCccceEEcC-------------CCCceEEEEEEe
Q 025807 59 APGGAPANVAVGISRLGGSSAF--VGKLGDDEFGYMLANILKENNVDTSGVRYDS-------------TARTALAFVTLR 123 (248)
Q Consensus 59 ~~GG~a~N~a~ala~lG~~v~l--~~~vG~D~~g~~i~~~L~~~gI~~~~v~~~~-------------~~~T~~~~i~i~ 123 (248)
..||.|.-+|..|+.+|.++.+ .+.+|.. ..+.|...+|.. ....+ +.+.-.-+|+=-
T Consensus 117 ~mGGnAgimAn~la~lg~~~vl~~~~~~s~~-----~~~l~~~~~i~~--p~~~~g~l~~~~~~ea~~~~~~~iH~I~Ey 189 (467)
T 1gc5_A 117 RIGGQAGIMANLLGGVYRIPTIVHVPQNPKL-----QAELFVDGPIYV--PVFEGNKLKLVHPKDAIAEEEELIHYIYEF 189 (467)
T ss_dssp EEESHHHHHHHHHHHTSCCCEEECCSCCCHH-----HHTTSCSSSEEE--EEECSSCEEEECGGGSCCSCCCCEEEEEEE
T ss_pred ccCccHHHHHHHHHhcCCCEEEEcCCCCCHH-----HHHhcCCCCeee--eeccCCceecccchhhccCCCCcceEEEEc
Confidence 8999999999999999998877 5555543 334443233321 11111 112222222211
Q ss_pred cCC----------CceEE-EecCCCcccccCcccchH---hhhcCccEEEEcccccccc-----h-hH---HHHHHHHHH
Q 025807 124 ADG----------EREFL-FFRHPSADMLLCESELDK---NLIKQGSIFHYGSISLIAE-----P-CR---STQLAAMNL 180 (248)
Q Consensus 124 ~~g----------~r~~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~v~~~g~~~~~~-----~-~~---~~~~~~~~~ 180 (248)
+.| ..+++ .++....... ..+.+.. +...++|.+.++|+.++.+ . -. +.+...++.
T Consensus 190 ~~G~~~~~~~aPraNRfI~s~D~~N~~l~-~~e~f~~~l~e~~~~~dl~vlSG~q~l~~~y~~g~~~~~~l~~~~~~l~~ 268 (467)
T 1gc5_A 190 PRGFQVFDVQAPRENRFIANADDYNARVY-MRREFREGFEEITRNVELAIISGLQVLKEYYPDGTTYKDVLDRVESHLNI 268 (467)
T ss_dssp CSSCEETTEECSSCEEEEEECCSSTTTTC-CCHHHHHSHHHHHTTCSEEEECCGGGCCSBCTTSCBHHHHHHHHHHHHHH
T ss_pred CCCCeecceeccCCceEEEecCCCCcccc-ccHHHHHHHHhhccCCCEEEEechhcccCccCCchhHHHHHHHHHHHHHh
Confidence 222 23343 3332222211 2233321 2346799999999987554 1 12 222334444
Q ss_pred HHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHhhhhCCEEEeCHHHHHHhH
Q 025807 181 AKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVKFETRYSCI 230 (248)
Q Consensus 181 a~~~g~~v~~D~~~~~~~w~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~ 230 (248)
....++++-+...+ ..+.+-.+..+ .+++++|.+=+||.|+..++
T Consensus 269 l~~~~~~iH~E~As----~~~~~l~~~i~-~ilp~vDSlGmNEqELa~l~ 313 (467)
T 1gc5_A 269 LNRYNVKSHFEFAY----TANRRVREALV-ELLPKFTSVGLNEVELASIM 313 (467)
T ss_dssp HHHTTCEEEEECCC----CCCHHHHHHHH-HHGGGCSEEEECHHHHHHHH
T ss_pred hcCCCCeEEEEECC----cccHHHHHHHH-hhccccccCccCHHHHHHHH
Confidence 46688999999987 34555556666 99999999999999998665
No 60
>1l2l_A ADP-dependent glucokinase; ADP glucokinase APO, transferase; 2.00A {Pyrococcus horikoshii} SCOP: c.72.1.3
Probab=97.55 E-value=0.00043 Score=60.55 Aligned_cols=159 Identities=9% Similarity=0.076 Sum_probs=92.6
Q ss_pred cCCChHHHHHHHHHHcCCceeE--EEeeCCCHHHHHHHHHHHHCCCCccceEEcC-------------CCCceEEEEE--
Q 025807 59 APGGAPANVAVGISRLGGSSAF--VGKLGDDEFGYMLANILKENNVDTSGVRYDS-------------TARTALAFVT-- 121 (248)
Q Consensus 59 ~~GG~a~N~a~ala~lG~~v~l--~~~vG~D~~g~~i~~~L~~~gI~~~~v~~~~-------------~~~T~~~~i~-- 121 (248)
..||.|.-+|..|+.+|.++.+ .+.+|.. ..+.|...+|.. ....+ +.+.-.-+|+
T Consensus 112 ~mGGnA~imAn~la~lg~~~vl~~~~~~s~~-----~~~l~~~~~i~~--p~~~~g~l~l~~~~e~~~~~~~~iH~I~Ey 184 (457)
T 1l2l_A 112 RMGGQVGIMANLLGGVYGIPVIAHVPQLSEL-----QASLFLDGPIYV--PTFERGELRLIHPREFRKGEEDCIHYIYEF 184 (457)
T ss_dssp EEESHHHHHHHHHTTTSCCCEEECCSSCCHH-----HHHTSCSSSEEE--EC------CEECGGGC----CCCEEECCEE
T ss_pred ccCchHHHHHHHHHHcCCCEEEEcCCCCCHH-----HHHhcCCCCeEe--eeccCCceeccCchhhccCCCCcceEEEEc
Confidence 8999999999999999999876 5555542 333333222221 10000 0111111111
Q ss_pred ---------EecCCCceEEEecCCCcccccCcccchH---hhhcCccEEEEcccccccch----hHHHHHHHHHHHHHCC
Q 025807 122 ---------LRADGEREFLFFRHPSADMLLCESELDK---NLIKQGSIFHYGSISLIAEP----CRSTQLAAMNLAKESG 185 (248)
Q Consensus 122 ---------i~~~g~r~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~v~~~g~~~~~~~----~~~~~~~~~~~a~~~g 185 (248)
..+...|-++.++....... ..+.+.. +...++|.+.++|+.++.+. ..+...+.++.....+
T Consensus 185 ~~G~~~~~~~aPraNRfI~s~D~~N~~l~-~~e~f~~~l~e~~~~~d~~vlSG~q~l~~~~~~~~~~~~~~~i~~L~~~~ 263 (457)
T 1l2l_A 185 PRNFKVLDFEAPRENRFIGAADDYNPILY-VREEWIERFEEIAKRSELAIISGLHPLTQENHGKPIKLVREHLKILNDLG 263 (457)
T ss_dssp CTTCEETTEECSSCEEEEEEECSSGGGTC-CCHHHHHSHHHHHTTCSEEEEECCTTCCTTTCHHHHHHHHHHHHHHHHTT
T ss_pred CCCCeecceecCCCCeEEEEcCCCCCCCc-ccHHHHHHHHhhccCCCEEEEeccccccccchhhhHHHHHHHHHHhcCCC
Confidence 11122233444432222221 2233322 23467999999999876551 1222334444447789
Q ss_pred CeEEEeCCCCCCCCCCHHHHHHHHHHhhhhCCEEEeCHHHHHHhH
Q 025807 186 SILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVKFETRYSCI 230 (248)
Q Consensus 186 ~~v~~D~~~~~~~w~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~ 230 (248)
+++-+...+ ..+.+-.+..+ .+++++|.+=+||.|+..++
T Consensus 264 ~~iH~E~As----~~~~~l~~~i~-~ilp~vDSlGmNEqELa~l~ 303 (457)
T 1l2l_A 264 IRAHLEFAF----TPDEVVRLEIV-KLLKHFYSVGLNEVELASVV 303 (457)
T ss_dssp CEEEEECCC----CSSHHHHHHHH-HHGGGCSEEEECHHHHHHHH
T ss_pred CeEEEEECC----cccHHHHHHHH-hhccccccCccCHHHHHHHH
Confidence 999999987 34555556666 99999999999999998864
No 61
>3pzs_A PM kinase, pyridoxamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; HET: MSE; 1.89A {Yersinia pestis} SCOP: c.72.1.5 PDB: 1td2_A* 1vi9_A*
Probab=97.53 E-value=0.00025 Score=58.66 Aligned_cols=76 Identities=14% Similarity=0.046 Sum_probs=56.2
Q ss_pred cCccEEEEcccccccchhHHHHHHHHHHHHHCC--CeEEEeCCCCC----CCCCCHHHHHHHHHH-hhhhCCEEEeCHHH
Q 025807 153 KQGSIFHYGSISLIAEPCRSTQLAAMNLAKESG--SILSYDPNLRL----PLWPSEEAAREGIMS-IWDQADIIKVKFET 225 (248)
Q Consensus 153 ~~~~~v~~~g~~~~~~~~~~~~~~~~~~a~~~g--~~v~~D~~~~~----~~w~~~~~~~~~~~~-~l~~~dil~~N~~E 225 (248)
.+.|++.. |+ +.+....+.+.++++.+++++ +++++||.... .+|. +...+.+.+ +++++|++++|+.|
T Consensus 76 ~~~d~v~~-G~-l~~~~~~~~v~~~l~~~~~~~~~~~vv~DPVm~~~~~~~~~~--~~~~~~l~~~ll~~~diitpN~~E 151 (289)
T 3pzs_A 76 KDCDAVLS-GY-IGSPEQGSHILAAVAQVKQANPDAWYFCDPVMGHPEKGCIVA--PGVAEFFCNEALPASDMIAPNLLE 151 (289)
T ss_dssp GGCCEEEE-CC-CSSHHHHHHHHHHHHHHHHHCTTCEEEECCCCEETTTEECSC--HHHHHHHHHTHHHHCSEECCCHHH
T ss_pred cCCCEEEE-CC-CCCHHHHHHHHHHHHHHHhhCCCCeEEEcCccccCCCCcccC--HHHHHHHHHHhhccCCEEeCCHHH
Confidence 57888754 44 345556788889999988766 88999984322 2343 445566664 89999999999999
Q ss_pred HHHhHHH
Q 025807 226 RYSCIQK 232 (248)
Q Consensus 226 ~~~l~g~ 232 (248)
++.|+|.
T Consensus 152 ~~~L~g~ 158 (289)
T 3pzs_A 152 LEQLSGE 158 (289)
T ss_dssp HHHHHTS
T ss_pred HHHHhCC
Confidence 9999984
No 62
>3zs7_A Pyridoxal kinase; transferase, sleeping sickness; HET: ATP; 2.00A {Trypanosoma brucei}
Probab=97.50 E-value=0.00016 Score=60.29 Aligned_cols=77 Identities=9% Similarity=0.015 Sum_probs=53.9
Q ss_pred cCccEEEEcccccccchhHHHHHHHHHHHHHCC------CeEEEeCCCCCC--CCCCHHHHHHHHHHhhhhCCEEEeCHH
Q 025807 153 KQGSIFHYGSISLIAEPCRSTQLAAMNLAKESG------SILSYDPNLRLP--LWPSEEAAREGIMSIWDQADIIKVKFE 224 (248)
Q Consensus 153 ~~~~~v~~~g~~~~~~~~~~~~~~~~~~a~~~g------~~v~~D~~~~~~--~w~~~~~~~~~~~~~l~~~dil~~N~~ 224 (248)
.++|.+..+. +.+....+.+.+++++.++++ .++++||..... .|. .+...+.++++++++|+++||..
T Consensus 75 ~~~daV~tG~--l~s~~~i~~v~~~l~~~k~~~~~~~~~~~vv~DPVm~d~G~~~~-~~~~~~~~~~Ll~~adiitPN~~ 151 (300)
T 3zs7_A 75 SNYRYILTGY--INNVDIIGRIRDTLKEVRELREKEDKKLTFICDPVMGDDGIMYC-KKEVLDAYRELVPLADIVTPNYF 151 (300)
T ss_dssp GGCSEEEECC--CCCHHHHHHHHHHHHHHHHHHHHTTCCCEEEECCCC----------CTHHHHHHHHGGGCSEECCCHH
T ss_pred ccCCEEEECC--CCCHHHHHHHHHHHHHHHhhCcCcCCCceEEEccccccCCCeec-CHHHHHHHHHHhhhCCEecCCHH
Confidence 4678876653 334445677778888887655 789999965433 453 23456677789999999999999
Q ss_pred HHHHhHHH
Q 025807 225 TRYSCIQK 232 (248)
Q Consensus 225 E~~~l~g~ 232 (248)
|++.|+|.
T Consensus 152 Ea~~L~g~ 159 (300)
T 3zs7_A 152 EASLLSGV 159 (300)
T ss_dssp HHHHHHSS
T ss_pred HHHHHhCC
Confidence 99999984
No 63
>3h74_A Pyridoxal kinase; PSI-II, structural genomics, prote structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.30A {Lactobacillus plantarum} PDB: 3hyo_A* 3ibq_A*
Probab=97.47 E-value=0.00021 Score=58.94 Aligned_cols=75 Identities=15% Similarity=0.049 Sum_probs=52.5
Q ss_pred CccEEEEcccccccchhHHHHHHHHHHHHHCCCeEEEeCCCCC--CCCC-CHHHHHHHHHHhhhhCCEEEeCHHHHHHhH
Q 025807 154 QGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRL--PLWP-SEEAAREGIMSIWDQADIIKVKFETRYSCI 230 (248)
Q Consensus 154 ~~~~v~~~g~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~--~~w~-~~~~~~~~~~~~l~~~dil~~N~~E~~~l~ 230 (248)
+.|.+.++.+ .+....+.+.+++++. .+.++++||..+. .+|. ..+...+.++++++++|++++|+.|++.|+
T Consensus 74 ~~daik~G~l--~s~~~i~~v~~~l~~~--~~~~vv~DPv~~~~g~l~~l~~~~~~~~l~~ll~~adiitpN~~Ea~~L~ 149 (282)
T 3h74_A 74 HFDQALIGYV--GSVALCQQITTYLEQQ--TLSLLVVDPVLGDLGQLYQGFDQDYVAAMRQLIQQADVILPNTTEAALLT 149 (282)
T ss_dssp CCSEEEECCC--CSHHHHHHHHHHHHHS--CCSEEEECCCCEETTEECTTCCHHHHHHHHHHGGGCSEECCCHHHHHHHH
T ss_pred ccCEEEECCC--CCHHHHHHHHHHHHHC--CCCcEEEcCeeecCCCCCCCCCHHHHHHHHHHhccCCEECCCHHHHHHHh
Confidence 6888988643 2322334444444433 4789999998764 2353 234566777889999999999999999999
Q ss_pred HH
Q 025807 231 QK 232 (248)
Q Consensus 231 g~ 232 (248)
|.
T Consensus 150 g~ 151 (282)
T 3h74_A 150 GA 151 (282)
T ss_dssp TC
T ss_pred CC
Confidence 84
No 64
>1ekq_A Hydroxyethylthiazole kinase; alpha-beta, transferase; 1.50A {Bacillus subtilis} SCOP: c.72.1.2 PDB: 1ekk_A 1c3q_A 1esj_A 1esq_A*
Probab=97.08 E-value=0.0015 Score=53.42 Aligned_cols=78 Identities=13% Similarity=0.049 Sum_probs=54.2
Q ss_pred hhhcCccEEEE-cccccccchhHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHhhh--hCCEEEeCHHHH
Q 025807 150 NLIKQGSIFHY-GSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWD--QADIIKVKFETR 226 (248)
Q Consensus 150 ~~~~~~~~v~~-~g~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~w~~~~~~~~~~~~~l~--~~dil~~N~~E~ 226 (248)
+.++.++.+++ .|. .++...+.+..+++.+++.|+++++||..... .. ...+...++++ ++|+++||..|+
T Consensus 54 ~~~~~a~~lvi~~G~--~~~~~~~~~~~~~~~a~~~~~pvVlDp~g~~~---~~-~~~~~~~~ll~~~~~~vitPN~~E~ 127 (272)
T 1ekq_A 54 DMAKIAGALVLNIGT--LSKESVEAMIIAGKSANEHGVPVILDPVGAGA---TP-FRTESARDIIREVRLAAIRGNAAEI 127 (272)
T ss_dssp HHHHHSSEEEEECTT--CCHHHHHHHHHHHHHHHHTTCCEEEECTTBTT---BH-HHHHHHHHHHHHSCCSEEEECHHHH
T ss_pred HHHHhCCEEEEECCC--CCHHHHHHHHHHHHHHHhcCCeEEEeCCCcCc---cc-chHHHHHHHHccCCCeEECCCHHHH
Confidence 34567888888 333 33445677888899999999999999964311 11 11233456676 899999999999
Q ss_pred HHhHHHH
Q 025807 227 YSCIQKM 233 (248)
Q Consensus 227 ~~l~g~~ 233 (248)
..|+|..
T Consensus 128 ~~L~g~~ 134 (272)
T 1ekq_A 128 AHTVGVT 134 (272)
T ss_dssp HHHCC--
T ss_pred HHHhCCC
Confidence 9997743
No 65
>3rm5_A Hydroxymethylpyrimidine/phosphomethylpyrimidine K THI20; HMP kinase (THID), thiaminase II, transferase; 2.68A {Saccharomyces cerevisiae}
Probab=96.56 E-value=0.0046 Score=55.74 Aligned_cols=75 Identities=16% Similarity=0.131 Sum_probs=53.4
Q ss_pred cCccEEEEcccccccchhHHHHHHHHHHHHHCCCeEEEeCCCCC----CCCCCHHHHHHHHH-HhhhhCCEEEeCHHHHH
Q 025807 153 KQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRL----PLWPSEEAAREGIM-SIWDQADIIKVKFETRY 227 (248)
Q Consensus 153 ~~~~~v~~~g~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~----~~w~~~~~~~~~~~-~~l~~~dil~~N~~E~~ 227 (248)
...|.+.++.. +....+.+.+++++.++.+.++++||..+. .+|. +...+.+. .+++++|+++||..|+.
T Consensus 90 ~~~daIkiG~l---s~~~i~~v~~~l~~~~~~~~~vVlDPvm~a~~g~~l~~--~~~~~~l~~~Ll~~a~iitPN~~Ea~ 164 (550)
T 3rm5_A 90 MKCNVIKTGML---TAAAIEVLHEKLLQLGENRPKLVVDPVLVATSGSSLAG--KDIVSLITEKVAPFADILTPNIPECY 164 (550)
T ss_dssp BCCSEEEECSC---CHHHHHHHHHHHHHHGGGSCEEEECCCC---------C--TTHHHHHHHHTGGGCSEECCBHHHHH
T ss_pred CCCCEEEECCC---CHHHHHHHHHHHHHhcccCCCEEEecceecCCCCcCCC--HHHHHHHHHHhhCcceEEecCHHHHH
Confidence 37889988753 555567777788777667899999996532 2232 22344455 78999999999999999
Q ss_pred HhHHH
Q 025807 228 SCIQK 232 (248)
Q Consensus 228 ~l~g~ 232 (248)
.|+|.
T Consensus 165 ~L~g~ 169 (550)
T 3rm5_A 165 KLLGE 169 (550)
T ss_dssp HHHSC
T ss_pred HHhCC
Confidence 99984
No 66
>1v8a_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, structural genomics, riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} PDB: 3hpd_A
Probab=96.23 E-value=0.017 Score=47.02 Aligned_cols=79 Identities=15% Similarity=0.180 Sum_probs=53.3
Q ss_pred hhhcCccEEEEcccccccchhHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHhhh-hCCEEEeCHHHHHH
Q 025807 150 NLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWD-QADIIKVKFETRYS 228 (248)
Q Consensus 150 ~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~w~~~~~~~~~~~~~l~-~~dil~~N~~E~~~ 228 (248)
+.++.+|.+.++- .+.++...+.+..+++.+++.++++++||..... .. ...+....+++ .+++++||..|+..
T Consensus 52 ~~~~~~dalvi~~-G~~~~~~~~~~~~~~~~a~~~~~pvVlDpv~~~~---~~-~~~~~~~~ll~~~~~vITPN~~E~~~ 126 (265)
T 1v8a_A 52 EMIRLADAVVINI-GTLDSGWRRSMVKATEIANELGKPIVLDPVGAGA---TK-FRTRVSLEILSRGVDVLKGNFGEISA 126 (265)
T ss_dssp HHHHHCSEEEEEC-TTCCHHHHHHHHHHHHHHHHHTCCEEEECTTBTT---BH-HHHHHHHHHHHHCCSEEEEEHHHHHH
T ss_pred HHHHHCCEEEEEE-CCCCHHHHHHHHHHHHHHHHcCCcEEEcCccccc---cc-cCHHHHHHHHHhCCcEEcCCHHHHHH
Confidence 4567789998853 2233333456677888888899999999964321 11 11233344554 39999999999999
Q ss_pred hHHHH
Q 025807 229 CIQKM 233 (248)
Q Consensus 229 l~g~~ 233 (248)
|+|..
T Consensus 127 L~g~~ 131 (265)
T 1v8a_A 127 LLGEE 131 (265)
T ss_dssp HHHHH
T ss_pred HhCCc
Confidence 99864
No 67
>3dzv_A 4-methyl-5-(beta-hydroxyethyl)thiazole kinase; NP_816404.1, structural genomics, joint center for structural genomics, JCSG; HET: ADP; 2.57A {Enterococcus faecalis}
Probab=95.08 E-value=0.12 Score=42.19 Aligned_cols=77 Identities=16% Similarity=0.082 Sum_probs=53.2
Q ss_pred hhhcCccEEEEcccccccchhHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHhh-hhCCEEEeCHHHHHH
Q 025807 150 NLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIW-DQADIIKVKFETRYS 228 (248)
Q Consensus 150 ~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~w~~~~~~~~~~~~~l-~~~dil~~N~~E~~~ 228 (248)
+..+.++.+.+.-= ...+...+.+...++.+++.++++++||-.... +.. ..+....++ ...+++.+|..|+..
T Consensus 54 e~~~~a~alvIn~G-~l~~~~~~~~~~a~~~a~~~~~PvVlDPVg~ga---s~~-r~~~~~~Ll~~~~~VItpN~~E~~~ 128 (273)
T 3dzv_A 54 QMFQQTSALVLNLG-HLSQEREQSLLAASDYARQVNKLTVVDLVGYGA---SDI-RNEVGEKLVHNQPTVVKGNLSEMRT 128 (273)
T ss_dssp HHHTTCSEEEEECC-SCCHHHHHHHHHHHHHHHHTTCCEEEECTTTTS---CHH-HHHHHHHHHHTCCSEEEEEHHHHHH
T ss_pred HHHHHCCeEEEecC-CCChHHHHHHHHHHHHHHHcCCcEEEchhhcCC---ccc-CHHHHHHHHhcCCcEECCCHHHHHH
Confidence 46778899988642 234444567778888899999999999954311 221 123333333 378999999999999
Q ss_pred hHH
Q 025807 229 CIQ 231 (248)
Q Consensus 229 l~g 231 (248)
|+|
T Consensus 129 L~g 131 (273)
T 3dzv_A 129 FCQ 131 (273)
T ss_dssp HTT
T ss_pred HhC
Confidence 987
No 68
>3hpd_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, ATP-binding, M metal-binding, nucleotide-binding, thiamine biosynthesis; 1.85A {Pyrococcus horikoshii}
Probab=94.08 E-value=0.29 Score=39.59 Aligned_cols=78 Identities=15% Similarity=0.160 Sum_probs=53.2
Q ss_pred hhhcCccEEEEcccccccchhHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHhh-hhCCEEEeCHHHHHH
Q 025807 150 NLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIW-DQADIIKVKFETRYS 228 (248)
Q Consensus 150 ~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~w~~~~~~~~~~~~~l-~~~dil~~N~~E~~~ 228 (248)
+..+.++.+.++-- ..++...+.+....+.+.+.|+++++||-..-. +.-+ .+...+++ .+.+++++|..|...
T Consensus 52 e~~~~a~al~iNiG-tl~~~~~~~m~~A~~~A~~~~~PvVLDPVg~ga---s~~R-~~~~~~ll~~~~~vIrgN~sEi~~ 126 (265)
T 3hpd_A 52 EMIRLADAVVINIG-TLDSGWRRSMVKATEIANELGKPIVLDPVGAGA---TKFR-TRVSLEILSRGVDVLKGNFGEISA 126 (265)
T ss_dssp HHHHHCSEEEEECT-TCCHHHHHHHHHHHHHHHHHTCCEEEECTTBTT---BHHH-HHHHHHHHHHCCSEEEEEHHHHHH
T ss_pred HHHHHCCeEEEECC-CCChHHHHHHHHHHHHHHHcCCCEEEcCCCCCC---cHHH-HHHHHHHHhcCCcEEcCCHHHHHH
Confidence 45566777777642 234455677778889999999999999953211 2211 23333433 368999999999999
Q ss_pred hHHH
Q 025807 229 CIQK 232 (248)
Q Consensus 229 l~g~ 232 (248)
|.|.
T Consensus 127 L~g~ 130 (265)
T 3hpd_A 127 LLGE 130 (265)
T ss_dssp HHHH
T ss_pred Hhcc
Confidence 9985
No 69
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=92.72 E-value=0.5 Score=42.33 Aligned_cols=76 Identities=13% Similarity=-0.000 Sum_probs=55.2
Q ss_pred hhhcC-ccEEEEcccccccchhHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHhhh--hCCEEEeCHHHH
Q 025807 150 NLIKQ-GSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWD--QADIIKVKFETR 226 (248)
Q Consensus 150 ~~~~~-~~~v~~~g~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~w~~~~~~~~~~~~~l~--~~dil~~N~~E~ 226 (248)
+..+. ++.+.++-= ...+ .+.+..+++.+++.++++++||-.... . ..-.+....+++ ..+++.+|..|+
T Consensus 301 e~~~~~~~alvin~G-~l~~--~~~~~~a~~~a~~~~~PvVlDPVg~~a---~-~~r~~~~~~Ll~~~~~~vItpN~~E~ 373 (540)
T 3nl6_A 301 DLAAIPHATLLLNTG-SVAP--PEMLKAAIRAYNDVKRPIVFDPVGYSA---T-ETRLLLNNKLLTFGQFSCIKGNSSEI 373 (540)
T ss_dssp HHTTSTTCEEEEESS-CSCC--HHHHHHHHHHHHTTTCCEEEECTTCTT---S-HHHHHHHHHHTTSCCCSEEEECHHHH
T ss_pred HHHhccCCeEEEeCC-CCCH--HHHHHHHHHHHHHcCCCEEEChHHhhc---c-cccHHHHHHHHhhCCCeEECCCHHHH
Confidence 35566 888888643 2333 688888888899999999999954321 2 222355566777 799999999999
Q ss_pred HHhHHH
Q 025807 227 YSCIQK 232 (248)
Q Consensus 227 ~~l~g~ 232 (248)
..|+|.
T Consensus 374 ~~L~g~ 379 (540)
T 3nl6_A 374 LGLAEL 379 (540)
T ss_dssp HHHTTC
T ss_pred HHHhCC
Confidence 999874
No 70
>2r3b_A YJEF-related protein; putative kinase in the ribokinase-like superfamily, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Enterococcus faecalis} PDB: 2r3e_A
Probab=90.14 E-value=0.38 Score=39.89 Aligned_cols=73 Identities=5% Similarity=-0.090 Sum_probs=43.7
Q ss_pred hhcCccEEEEcccccccchhHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHhh--hhCCEEEeCHHHHHH
Q 025807 151 LIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIW--DQADIIKVKFETRYS 228 (248)
Q Consensus 151 ~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~w~~~~~~~~~~~~~l--~~~dil~~N~~E~~~ 228 (248)
.++.++.+.++--...++...+.+.++++..+ .++++++|+.. ......-..++ +..++++||..|+..
T Consensus 108 ~~~~~dav~IG~Gl~~~~~~~~~v~~~l~~~~-~~~pvVlDa~g--------~~ll~~~~~~l~~~~~~viTPN~~E~~~ 178 (310)
T 2r3b_A 108 VVEQADVILIGPGLGLDATAQQILKMVLAQHQ-KQQWLIIDGSA--------ITLFSQGNFSLTYPEKVVFTPHQMEWQR 178 (310)
T ss_dssp HHHHCSEEEECTTCCSSHHHHHHHHHHHHHCC-TTCEEEEETHH--------HHHHHHTTCCCSSGGGEEEECCHHHHHH
T ss_pred HhccCCEEEEeCCCCCCHHHHHHHHHHHHhcC-CCCcEEEcCCc--------chhcccchhhhcCCCCEEEcCCHHHHHH
Confidence 44578888886211123333455555655443 58999999942 11111100122 467899999999999
Q ss_pred hHHH
Q 025807 229 CIQK 232 (248)
Q Consensus 229 l~g~ 232 (248)
|+|.
T Consensus 179 L~g~ 182 (310)
T 2r3b_A 179 LSHL 182 (310)
T ss_dssp HHCC
T ss_pred HhCC
Confidence 9874
No 71
>3bgk_A SMU.573, putative uncharacterized protein; alpha/beta three layer sandwich, unknown function; 2.50A {Streptococcus mutans}
Probab=87.46 E-value=0.18 Score=41.94 Aligned_cols=73 Identities=10% Similarity=-0.016 Sum_probs=42.6
Q ss_pred hhcCccEEEEcccccccchhHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHh-h-hhCCEEEeCHHHHHH
Q 025807 151 LIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSI-W-DQADIIKVKFETRYS 228 (248)
Q Consensus 151 ~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~w~~~~~~~~~~~~~-l-~~~dil~~N~~E~~~ 228 (248)
.++..+.+.++-=...++...+.+.++++..+ .++++++|+.. ......-..+ + +..++++||..|+..
T Consensus 122 ~~~~~dav~IG~Gl~~~~~~~~~v~~~l~~~~-~~~pvVlDa~g--------~~ll~~~~~l~L~~~~~viTPN~~E~~~ 192 (311)
T 3bgk_A 122 QITAADVVLMGPGLAEDDLAQTTFDVVWQAIE-PKQTLIIDGSA--------INLLAKRKPAIWPTKQIILTPHQKEWER 192 (311)
T ss_dssp HHHHCSEEEECTTCCSSHHHHHHHHHHHHHCC-TTSEEEEETHH--------HHHHHHCC-CCCSCSCEEEECCSCC-CT
T ss_pred HhccCCEEEEcCCCCCCHHHHHHHHHHHHHcC-CCCeEEEeCCh--------hhhhccChhhcCCCCCEEECCcHHHHHH
Confidence 44578888886211123333455555655444 58899999942 1111110011 3 468899999999999
Q ss_pred hHHH
Q 025807 229 CIQK 232 (248)
Q Consensus 229 l~g~ 232 (248)
|+|.
T Consensus 193 L~g~ 196 (311)
T 3bgk_A 193 LSGL 196 (311)
T ss_dssp TTCC
T ss_pred HhCC
Confidence 9874
No 72
>3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A*
Probab=72.48 E-value=2.7 Score=37.17 Aligned_cols=72 Identities=11% Similarity=-0.028 Sum_probs=43.3
Q ss_pred hhhcCccEEEEcccccccchhHHHHHHHHH-HHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHhhhhCCEEEeCHHHHHH
Q 025807 150 NLIKQGSIFHYGSISLIAEPCRSTQLAAMN-LAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVKFETRYS 228 (248)
Q Consensus 150 ~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~-~a~~~g~~v~~D~~~~~~~w~~~~~~~~~~~~~l~~~dil~~N~~E~~~ 228 (248)
+.++.+|.+.++-=...++. ..++++ .+++.++++++|+....- . . ++. .+.++..++++||..|+..
T Consensus 316 ~~~~~~davviGpGlg~~~~----~~~~~~~~l~~~~~pvVlDadgl~~-l-~----~~l-l~~~~~~~vlTPN~~E~~~ 384 (502)
T 3rss_A 316 ELSKDVDVVAIGPGLGNNEH----VREFVNEFLKTLEKPAVIDADAINV-L-D----TSV-LKERKSPAVLTPHPGEMAR 384 (502)
T ss_dssp HHHTTCSEEEECTTCCCSHH----HHHHHHHHHHHCCSCEEECHHHHHT-C-C----HHH-HHHCSSCEEECCCHHHHHH
T ss_pred HHhccCCEEEEeCCCCCCHH----HHHHHHHHHHhcCCCEEEeCcccch-h-c----HHH-HhccCCCEEEeCCHHHHHH
Confidence 35678999988732122221 223333 345669999999953110 0 0 111 2223457899999999999
Q ss_pred hHHH
Q 025807 229 CIQK 232 (248)
Q Consensus 229 l~g~ 232 (248)
|+|.
T Consensus 385 L~g~ 388 (502)
T 3rss_A 385 LVKK 388 (502)
T ss_dssp HHTC
T ss_pred HhCC
Confidence 9984
No 73
>3rpz_A ADP/ATP-dependent NAD(P)H-hydrate dehydratase; structural genomics, PSI-biology; HET: AMP NPW; 1.51A {Bacillus subtilis} PDB: 3rph_A* 3rq2_A* 3rq5_A* 3rq6_A* 3rq8_A* 3rqh_A* 3rqq_A* 3rqx_A* 1kyh_A
Probab=63.18 E-value=6.3 Score=31.92 Aligned_cols=68 Identities=6% Similarity=-0.067 Sum_probs=43.7
Q ss_pred hcCccEEEEcccccccchhHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHhhhhCCEEEeCHHHHHHhHH
Q 025807 152 IKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVKFETRYSCIQ 231 (248)
Q Consensus 152 ~~~~~~v~~~g~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~w~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g 231 (248)
++.+|++.++- .+.. .+...++++.+.+.+.++++|.....-.+ .......++++||..|+..|+|
T Consensus 96 l~~~davviGP--Glg~--~~~~~~~~~~~l~~~~p~VlDAdal~~~~----------l~~~~~~~vlTPN~~E~~~L~g 161 (279)
T 3rpz_A 96 EETYRAIAIGP--GLPQ--TESVQQAVDHVLTADCPVILDAGALAKRT----------YPKREGPVILTPHPGEFFRMTG 161 (279)
T ss_dssp SSCCSEEEECT--TCCC--CHHHHHHHHHHTTSSSCEEECGGGCCSCC----------CCCCSSCEEECCCHHHHHHHHC
T ss_pred ccCCCEEEECC--CCCC--CHHHHHHHHHHHhhCCCEEEECCccchhh----------hhhccCCEEEecCHHHHHHHhC
Confidence 46789998863 1221 12335666777778889999986421100 0012456899999999999997
Q ss_pred HH
Q 025807 232 KM 233 (248)
Q Consensus 232 ~~ 233 (248)
..
T Consensus 162 ~~ 163 (279)
T 3rpz_A 162 VP 163 (279)
T ss_dssp CC
T ss_pred CC
Confidence 53
No 74
>3can_A Pyruvate-formate lyase-activating enzyme; structural genomics, pyruvate-formate lyase-activating enzym MCSG, APC20359.1; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=55.64 E-value=53 Score=23.90 Aligned_cols=43 Identities=9% Similarity=0.186 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHhhhhCCEEEe
Q 025807 171 RSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKV 221 (248)
Q Consensus 171 ~~~~~~~~~~a~~~g~~v~~D~~~~~~~w~~~~~~~~~~~~~l~~~dil~~ 221 (248)
.+.+.++++.+++.|..+.+..+... . .+.+..+++..|.+.+
T Consensus 18 ~~~~~~l~~~~~~~g~~~~l~TNG~l----~----~~~~~~l~~~~d~v~i 60 (182)
T 3can_A 18 PEFLIDILKRCGQQGIHRAVDTTLLA----R----KETVDEVMRNCELLLI 60 (182)
T ss_dssp HHHHHHHHHHHHHTTCCEEEECTTCC----C----HHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHHHHHCCCcEEEECCCCC----C----HHHHHHHHhhCCEEEE
Confidence 34456888888888888888887642 1 2344555566776655
No 75
>2re2_A Uncharacterized protein TA1041; dinitrogenase iron-molybdenum cofactor, structural genomics, center for structural genomics; HET: MSE; 1.30A {Thermoplasma acidophilum dsm 1728}
Probab=53.18 E-value=7.3 Score=27.78 Aligned_cols=38 Identities=13% Similarity=0.231 Sum_probs=31.8
Q ss_pred CChHHHHHHHHHHcCCceeEEEeeCCCHHHHHHHHHHHHCCCCc
Q 025807 61 GGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDT 104 (248)
Q Consensus 61 GG~a~N~a~ala~lG~~v~l~~~vG~D~~g~~i~~~L~~~gI~~ 104 (248)
+|.+...+..|+..|+++.+++.+|..+ ++.|++ ||++
T Consensus 65 ~g~g~~~~~~L~~~gv~~VI~g~iG~~a-----~~~L~~-GI~v 102 (136)
T 2re2_A 65 AARGVFMLKSALDHGANALVLSEIGSPG-----FNFIKN-KMDV 102 (136)
T ss_dssp SCHHHHHHHHHHHTTCSEEEESCCBHHH-----HHHHTT-TSEE
T ss_pred CCccHHHHHHHHHcCCCEEEECCCCHhH-----HHHHHC-CCEE
Confidence 5767788889999999999999997764 488899 9984
No 76
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=49.30 E-value=20 Score=27.96 Aligned_cols=38 Identities=5% Similarity=0.077 Sum_probs=27.2
Q ss_pred HHHHHH---HHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHhhh--hCCEE
Q 025807 174 QLAAMN---LAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWD--QADII 219 (248)
Q Consensus 174 ~~~~~~---~a~~~g~~v~~D~~~~~~~w~~~~~~~~~~~~~l~--~~dil 219 (248)
....++ .+++.|+++.+++++.-+ .+.++++++ .+|++
T Consensus 100 ~~~~i~~~~~i~~~G~k~gvalnp~tp--------~~~~~~~l~~g~~D~V 142 (227)
T 1tqx_A 100 TERCIQLAKEIRDNNLWCGISIKPKTD--------VQKLVPILDTNLINTV 142 (227)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEECTTSC--------GGGGHHHHTTTCCSEE
T ss_pred HHHHHHHHHHHHHcCCeEEEEeCCCCc--------HHHHHHHhhcCCcCEE
Confidence 345666 899999998888865432 235667777 78988
No 77
>2fcj_A Small toprim domain protein; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; HET: MES; 1.30A {Geobacillus stearothermophilus} SCOP: c.136.1.1 PDB: 2i5r_A*
Probab=48.47 E-value=12 Score=26.13 Aligned_cols=78 Identities=10% Similarity=-0.011 Sum_probs=55.1
Q ss_pred cCccEEEEcccccccchhHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHhhhhCCEEEeCHHH--HHHhH
Q 025807 153 KQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVKFET--RYSCI 230 (248)
Q Consensus 153 ~~~~~v~~~g~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~w~~~~~~~~~~~~~l~~~dil~~N~~E--~~~l~ 230 (248)
..++.+..+|. . +.+.+..+.+..+.+++.++.|+-. ..++.+..+.+.++.+...+..+.+ .+.+.
T Consensus 25 ~~~~iI~t~Gs--i---~~~~l~~I~~~~~~r~VIi~TD~D~------~GekIRk~i~~~lp~~~hafi~r~~~gVE~a~ 93 (119)
T 2fcj_A 25 EPVVIVCTNGT--I---SDARLEELADELEGYDVYLLADADE------AGEKLRRQFRRMFPEAEHLYIDRAYREVAAAP 93 (119)
T ss_dssp SCCEEEECCSC--C---CHHHHHHHHHHTTTSEEEEECCSSH------HHHHHHHHHHHHCTTSEEECCCTTTCSTTTSC
T ss_pred CCCCEEEeCCc--c---CHHHHHHHHHHhcCCCEEEEECCCc------cHHHHHHHHHHHCCCCcEEeccCCccCcccCC
Confidence 36788888875 2 3455556666666788888999964 3467788899999999999987655 34444
Q ss_pred HHHHHHHHhhc
Q 025807 231 QKMLLHWYRYS 241 (248)
Q Consensus 231 g~~~~~~~~~~ 241 (248)
...+++.|...
T Consensus 94 ~~~I~~aL~~~ 104 (119)
T 2fcj_A 94 IWHLAQVLLRA 104 (119)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHhc
Confidence 55666666554
No 78
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=41.54 E-value=1.2e+02 Score=26.30 Aligned_cols=47 Identities=6% Similarity=-0.127 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHhh--hhCCEEEeC
Q 025807 172 STQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIW--DQADIIKVK 222 (248)
Q Consensus 172 ~~~~~~~~~a~~~g~~v~~D~~~~~~~w~~~~~~~~~~~~~l--~~~dil~~N 222 (248)
+-+.++.+.|+++|+++.+|-..... .....+.....+ +++|.+..+
T Consensus 215 ddl~~Ia~ia~~~gi~l~VD~A~G~~----~~~~~~l~~~a~~~~~AD~~v~S 263 (450)
T 3bc8_A 215 DRLEELAVICANYDIPHVVNNAYGLQ----SSKCMHLIQQGARVGRIDAFVQS 263 (450)
T ss_dssp CCHHHHHHHHHHHTCCEEEECTTTTT----CHHHHHHHHHHHHHSCCCEEEEE
T ss_pred cCHHHHHHHHHHCCCeEEEECCCchh----hhhhHhHHHHHhcccCCCEEEEC
Confidence 33568888999999999999654321 122344444555 578988765
No 79
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=41.06 E-value=28 Score=27.19 Aligned_cols=56 Identities=11% Similarity=0.078 Sum_probs=37.9
Q ss_pred hcCccEEEEcccccccchhHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHhhhhCCEEE
Q 025807 152 IKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIK 220 (248)
Q Consensus 152 ~~~~~~v~~~g~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~w~~~~~~~~~~~~~l~~~dil~ 220 (248)
-.++|++++-.-.. . ......++.+++.|+++.+.+++.-+ .+.++++++.+|++.
T Consensus 78 ~aGAd~itvh~Ea~----~-~~~~~~i~~i~~~G~k~gv~lnp~tp--------~~~~~~~l~~~D~Vl 133 (231)
T 3ctl_A 78 RAGADFITLHPETI----N-GQAFRLIDEIRRHDMKVGLILNPETP--------VEAMKYYIHKADKIT 133 (231)
T ss_dssp HHTCSEEEECGGGC----T-TTHHHHHHHHHHTTCEEEEEECTTCC--------GGGGTTTGGGCSEEE
T ss_pred HcCCCEEEECcccC----C-ccHHHHHHHHHHcCCeEEEEEECCCc--------HHHHHHHHhcCCEEE
Confidence 35689996543210 1 23568889999999998887765432 345677888999886
No 80
>1jzt_A Hypothetical 27.5 kDa protein in SPX19-GCR2 inter region; yeast hypothetical protein, structural genomics, selenomethi PSI; 1.94A {Saccharomyces cerevisiae} SCOP: c.104.1.1
Probab=39.71 E-value=39 Score=26.64 Aligned_cols=43 Identities=21% Similarity=0.106 Sum_probs=28.4
Q ss_pred CCChHHHHHHHHHHcCCceeEEEeeCC---CHHHHHHHHHHHHCCCC
Q 025807 60 PGGAPANVAVGISRLGGSSAFVGKLGD---DEFGYMLANILKENNVD 103 (248)
Q Consensus 60 ~GG~a~N~a~ala~lG~~v~l~~~vG~---D~~g~~i~~~L~~~gI~ 103 (248)
-||.|+-+|..|+..|.+|.++- ++. ....+..++.+++.|+.
T Consensus 70 NGGDGlv~AR~L~~~G~~V~v~~-~~~~~~~~~~~~~~~~~~~~g~~ 115 (246)
T 1jzt_A 70 NGGDGLVCARHLKLFGYNPVVFY-PKRSERTEFYKQLVHQLNFFKVP 115 (246)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEC-CCCCTTCHHHHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHHHHHCCCeEEEEE-cCCCCCCHHHHHHHHHHHHcCCc
Confidence 37888888999988898887763 332 12334445666666664
No 81
>4fyk_A Deoxyribonucleoside 5'-monophosphate N-glycosidas; hydrolas; HET: SRA; 1.79A {Rattus norvegicus} PDB: 4fyh_A* 4fyi_A* 2klh_A*
Probab=39.37 E-value=94 Score=22.49 Aligned_cols=66 Identities=8% Similarity=0.020 Sum_probs=37.9
Q ss_pred EEEEcccccccchhHHHHHHHHHHHHHCCCeEEEeCCCCCC---CC-----CCHHHHHHHHHHhhhhCCEEEeCHH
Q 025807 157 IFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLP---LW-----PSEEAAREGIMSIWDQADIIKVKFE 224 (248)
Q Consensus 157 ~v~~~g~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~---~w-----~~~~~~~~~~~~~l~~~dil~~N~~ 224 (248)
-||++|.............++.+..++.| .| ++.....+ .| .+.....+.....+..+|+++++-+
T Consensus 4 kIYlAGP~f~~~e~~~~~~~i~~~L~~~G-~V-l~~hv~~~~l~~~g~~~~~~~~~i~~~d~~~i~~aD~vvA~l~ 77 (152)
T 4fyk_A 4 SVYFCGSIRGGREDQALYARIVSRLRRYG-KV-LTEHVADAELEPLGEEAAGGDQFIHEQNLNWLQQADVVVAEVT 77 (152)
T ss_dssp EEEEECCSTTCCTTHHHHHHHHHHHTTTS-EE-CCCC-------------CCCHHHHHHHHHHHHHHCSEEEEECS
T ss_pred eEEEECCCCCcHHHHHHHHHHHHHHHHcC-cc-cccccCchhhhhccccccCCHHHHHHHHHHHHHHCCEEEEeCC
Confidence 36777753332334466778888888888 44 33221110 01 1333445556678899999998644
No 82
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=39.28 E-value=88 Score=25.40 Aligned_cols=38 Identities=8% Similarity=-0.113 Sum_probs=22.6
Q ss_pred CccEEEEccccc-ccchhHHHHHHHHHHHHHCCCeEEEeCC
Q 025807 154 QGSIFHYGSISL-IAEPCRSTQLAAMNLAKESGSILSYDPN 193 (248)
Q Consensus 154 ~~~~v~~~g~~~-~~~~~~~~~~~~~~~a~~~g~~v~~D~~ 193 (248)
+.++++++.... .+... .+.++.+.|+++|+.+++|-.
T Consensus 148 ~~~~v~~~~~~nptG~~~--~l~~i~~l~~~~~~~li~De~ 186 (393)
T 3kgw_A 148 KPVLLFLVHGESSTGVVQ--PLDGFGELCHRYQCLLLVDSV 186 (393)
T ss_dssp CCSEEEEESEETTTTEEC--CCTTHHHHHHHTTCEEEEECT
T ss_pred CCcEEEEeccCCcchhhc--cHHHHHHHHHHcCCEEEEECC
Confidence 567776654321 11100 034677778888999998864
No 83
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=38.96 E-value=25 Score=31.60 Aligned_cols=28 Identities=18% Similarity=0.251 Sum_probs=8.6
Q ss_pred CCCCCCCCCCcccccccccCCCCCCCccEEEEcc
Q 025807 3 DNHNPTSGAGSKDLSASMDGGSGAYDRLVVCFGE 36 (248)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ilviG~ 36 (248)
.+||+.++...+....+|+ ..+|++||.
T Consensus 4 ~~~~~~~~~~~~~~~~~M~------~~DVvIVGg 31 (591)
T 3i3l_A 4 SHHHHHHSSGLVPRGSHMT------RSKVAIIGG 31 (591)
T ss_dssp ----------------CCC------CCEEEEECC
T ss_pred cccCCCCCCCCCCCcCcCC------CCCEEEECc
Confidence 3567766766666666665 367999874
No 84
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A
Probab=38.20 E-value=69 Score=26.34 Aligned_cols=25 Identities=24% Similarity=0.163 Sum_probs=21.2
Q ss_pred hHHHHHHHHHHHHHCCCeEEEeCCC
Q 025807 170 CRSTQLAAMNLAKESGSILSYDPNL 194 (248)
Q Consensus 170 ~~~~~~~~~~~a~~~g~~v~~D~~~ 194 (248)
..+.+.+++++|+++|++|.+|+..
T Consensus 58 d~~~~~~~~~~ak~~Gl~v~ld~hy 82 (334)
T 1fob_A 58 DLDYNLELAKRVKAAGMSLYLDLHL 82 (334)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEecc
Confidence 3577789999999999999999753
No 85
>3kbq_A Protein TA0487; structural genomics, CINA, protein structure initiative, MCS midwest center for structural genomics, unknown function; 2.00A {Thermoplasma acidophilum}
Probab=36.35 E-value=54 Score=24.29 Aligned_cols=35 Identities=11% Similarity=-0.133 Sum_probs=26.7
Q ss_pred hHHHHHHHHHHcCCceeEEEeeCCCHHHHHHHHHHHH
Q 025807 63 APANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKE 99 (248)
Q Consensus 63 ~a~N~a~ala~lG~~v~l~~~vG~D~~g~~i~~~L~~ 99 (248)
++...+..|..+|.++...+.|++|. +.|.+.+++
T Consensus 24 N~~~l~~~L~~~G~~v~~~~iv~Dd~--~~I~~~l~~ 58 (172)
T 3kbq_A 24 NAAFIGNFLTYHGYQVRRGFVVMDDL--DEIGWAFRV 58 (172)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEECSCH--HHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEEEEeCCCH--HHHHHHHHH
Confidence 45667888889999999999999995 335555544
No 86
>2wfb_A Putative uncharacterized protein ORP; mixed molybdenum-copper sulphide cluster, alpha and beta protein, biosynthetic protein; 2.00A {Desulfovibrio gigas}
Probab=35.85 E-value=17 Score=24.92 Aligned_cols=40 Identities=20% Similarity=0.312 Sum_probs=31.7
Q ss_pred CCChHHHHHHHHHHcCCceeEEEeeCCCHHHHHHHHHHHHCCCCc
Q 025807 60 PGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDT 104 (248)
Q Consensus 60 ~GG~a~N~a~ala~lG~~v~l~~~vG~D~~g~~i~~~L~~~gI~~ 104 (248)
.+|.+...+..|+..|+++.+++.+|.. ..+.|++.||+.
T Consensus 52 ~~g~g~~~~~~l~~~gv~~vi~~~iG~~-----a~~~L~~~GI~v 91 (120)
T 2wfb_A 52 SHGAGINAAQVLAKSGAGVLLTGYVGPK-----AFQALQAAGIKV 91 (120)
T ss_dssp SSCHHHHHHHHHHHHTEEEEECSCCCHH-----HHHHHHHTTCEE
T ss_pred CCCchHHHHHHHHHCCCCEEEECCCCHh-----HHHHHHHCCCEE
Confidence 4566667888888889999999987655 567889999984
No 87
>2o8n_A APOA-I binding protein; rossmann fold, protein binding; 2.00A {Mus musculus} PDB: 2dg2_A
Probab=34.37 E-value=47 Score=26.55 Aligned_cols=42 Identities=12% Similarity=0.029 Sum_probs=22.3
Q ss_pred CChHHHHHHHHHHcCCceeEEEeeCC--CHHHHHHHHHHHHCCCC
Q 025807 61 GGAPANVAVGISRLGGSSAFVGKLGD--DEFGYMLANILKENNVD 103 (248)
Q Consensus 61 GG~a~N~a~ala~lG~~v~l~~~vG~--D~~g~~i~~~L~~~gI~ 103 (248)
||.|+-+|..|+..|.+|.++- ++. ....+..++.+++.|+.
T Consensus 92 GGDGlv~AR~L~~~G~~V~V~~-~~~~~~~~~~~~~~~~~~~g~~ 135 (265)
T 2o8n_A 92 GGDGLVCARHLKLFGYQPTIYY-PKRPNKPLFTGLVTQCQKMDIP 135 (265)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEC-CSCCSSHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHCCCcEEEEE-eCCCCCHHHHHHHHHHHHcCCc
Confidence 5666666666666676665542 221 22333444455555553
No 88
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=34.04 E-value=27 Score=29.91 Aligned_cols=23 Identities=9% Similarity=0.036 Sum_probs=20.5
Q ss_pred hHHHHHHHHHHHHHCCCeEEEeC
Q 025807 170 CRSTQLAAMNLAKESGSILSYDP 192 (248)
Q Consensus 170 ~~~~~~~~~~~a~~~g~~v~~D~ 192 (248)
..+..+++++.|+++|++|++|.
T Consensus 75 t~~df~~lv~~aH~~Gi~VilD~ 97 (496)
T 4gqr_A 75 NEDEFRNMVTRCNNVGVRIYVDA 97 (496)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CHHHHHHHHHHHHHCCCEEEEEE
Confidence 34778899999999999999997
No 89
>1y5e_A Molybdenum cofactor biosynthesis protein B; structural genomics, protein structure initiative, PSI, MCSG, midwest center for structural genomics; 1.90A {Bacillus cereus} SCOP: c.57.1.1
Probab=33.42 E-value=89 Score=22.75 Aligned_cols=35 Identities=9% Similarity=0.008 Sum_probs=26.7
Q ss_pred hHHHHHHHHHHcCCceeEEEeeCCCHHHHHHHHHHHH
Q 025807 63 APANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKE 99 (248)
Q Consensus 63 ~a~N~a~ala~lG~~v~l~~~vG~D~~g~~i~~~L~~ 99 (248)
++...+..|..+|.++...+.|++|. +.|.+.+++
T Consensus 32 n~~~l~~~L~~~G~~v~~~~iv~Dd~--~~i~~~l~~ 66 (169)
T 1y5e_A 32 SGQLLHELLKEAGHKVTSYEIVKDDK--ESIQQAVLA 66 (169)
T ss_dssp HHHHHHHHHHHHTCEEEEEEEECSSH--HHHHHHHHH
T ss_pred hHHHHHHHHHHCCCeEeEEEEeCCCH--HHHHHHHHH
Confidence 34567777888899999999999995 446666655
No 90
>1rdu_A Conserved hypothetical protein; atnos, candid, structural genomics, joint center for structu genomics, JCSG, protein structure initiative; NMR {Thermotoga maritima} SCOP: c.55.5.1
Probab=33.05 E-value=12 Score=25.52 Aligned_cols=39 Identities=18% Similarity=0.253 Sum_probs=31.3
Q ss_pred CChHHHHHHHHHHcCCceeEEEeeCCCHHHHHHHHHHHHCCCCc
Q 025807 61 GGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDT 104 (248)
Q Consensus 61 GG~a~N~a~ala~lG~~v~l~~~vG~D~~g~~i~~~L~~~gI~~ 104 (248)
+|.+...+..|+..|+++.+++.+|..+ .+.|++.||+.
T Consensus 48 ~g~g~~~~~~l~~~gv~~vi~~~iG~~a-----~~~L~~~GI~v 86 (116)
T 1rdu_A 48 HGTGPKVVQSLVSKGVEYLIASNVGRNA-----FETLKAAGVKV 86 (116)
T ss_dssp CCSSCSHHHHHHTTTCCEEECSSCCSSC-----HHHHHTTTCEE
T ss_pred CCccHHHHHHHHHcCCCEEEECCCCHhH-----HHHHHHCCCEE
Confidence 4444567888888899999999999884 57888999984
No 91
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=32.14 E-value=1.2e+02 Score=24.96 Aligned_cols=21 Identities=19% Similarity=0.210 Sum_probs=15.9
Q ss_pred HHHHHHHHHHCCCeEEEeCCC
Q 025807 174 QLAAMNLAKESGSILSYDPNL 194 (248)
Q Consensus 174 ~~~~~~~a~~~g~~v~~D~~~ 194 (248)
+.++.+.|+++|+.+++|-..
T Consensus 182 l~~i~~l~~~~~~~li~Dea~ 202 (423)
T 3lvm_A 182 IAAIGEMCRARGIIYHVDATQ 202 (423)
T ss_dssp HHHHHHHHHHHTCEEEEECTT
T ss_pred HHHHHHHHHHcCCEEEEEhhh
Confidence 456777788889999998753
No 92
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=31.24 E-value=96 Score=26.13 Aligned_cols=40 Identities=15% Similarity=0.134 Sum_probs=25.1
Q ss_pred cCccEEEEccccc-ccchhHHHHHHHHHHHHHCCCeEEEeCCC
Q 025807 153 KQGSIFHYGSISL-IAEPCRSTQLAAMNLAKESGSILSYDPNL 194 (248)
Q Consensus 153 ~~~~~v~~~g~~~-~~~~~~~~~~~~~~~a~~~g~~v~~D~~~ 194 (248)
++.++|++....- .... ..+.++.+.|+++|+.+++|-..
T Consensus 165 ~~t~~v~le~p~NptG~~--~~l~~i~~la~~~g~~livDe~~ 205 (414)
T 3ndn_A 165 VPTQAVFFETPSNPMQSL--VDIAAVTELAHAAGAKVVLDNVF 205 (414)
T ss_dssp SCCSEEEEESSCTTTCCC--CCHHHHHHHHHHTTCEEEEECTT
T ss_pred CCCeEEEEECCCCCCCcc--ccHHHHHHHHHHcCCEEEEECCC
Confidence 4577888754332 1111 12457777788899999999753
No 93
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=31.15 E-value=1.4e+02 Score=25.32 Aligned_cols=41 Identities=15% Similarity=0.139 Sum_probs=23.7
Q ss_pred cCccEEEEccccc-ccchhHHHHHHHHHHHHHCCCeEEEeCCCC
Q 025807 153 KQGSIFHYGSISL-IAEPCRSTQLAAMNLAKESGSILSYDPNLR 195 (248)
Q Consensus 153 ~~~~~v~~~g~~~-~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~ 195 (248)
++.++|++....- ..... .+.++.+.|+++|+.+++|-...
T Consensus 166 ~~t~~v~~e~p~NptG~~~--dl~~i~~la~~~g~~livD~a~~ 207 (430)
T 3ri6_A 166 ETTKLLFLETISNPQLQVA--DLEALSKVVHAKGIPLVVDTTMT 207 (430)
T ss_dssp TTEEEEEEESSCTTTCCCC--CHHHHHHHHHTTTCCEEEECTTS
T ss_pred CCCeEEEEECCCCCCCeec--CHHHHHHHHHHcCCEEEEECCCc
Confidence 3566777654321 11111 13467777888899988887543
No 94
>1eo1_A Hypothetical protein MTH1175; mixed A/B protein, mixed beta sheet, strand order 321456; NMR {Methanothermobacterthermautotrophicus} SCOP: c.55.5.1
Probab=31.11 E-value=16 Score=25.22 Aligned_cols=38 Identities=21% Similarity=0.239 Sum_probs=30.2
Q ss_pred ChHHHHHHHHHHcCCceeEEEeeCCCHHHHHHHHHHHHCCCCc
Q 025807 62 GAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDT 104 (248)
Q Consensus 62 G~a~N~a~ala~lG~~v~l~~~vG~D~~g~~i~~~L~~~gI~~ 104 (248)
|.+...+..|+..|+++.+++.+|.. ..+.|++.||++
T Consensus 52 g~g~~~~~~l~~~gv~~vi~~~iG~~-----a~~~L~~~GI~v 89 (124)
T 1eo1_A 52 GAGIRTAQIIANNGVKAVIASSPGPN-----AFEVLNELGIKI 89 (124)
T ss_dssp SCSTTHHHHHHHTTCCEEEECCSSHH-----HHHHHHHHTCEE
T ss_pred CCCHHHHHHHHHCCCCEEEECCcCHH-----HHHHHHHCCCEE
Confidence 44456888888899999999988655 567888899984
No 95
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=30.96 E-value=2.1e+02 Score=22.99 Aligned_cols=20 Identities=10% Similarity=0.109 Sum_probs=16.2
Q ss_pred HHHHHHHHHHCCCeEEEeCC
Q 025807 174 QLAAMNLAKESGSILSYDPN 193 (248)
Q Consensus 174 ~~~~~~~a~~~g~~v~~D~~ 193 (248)
+.++.+.|+++|+.+++|-.
T Consensus 163 l~~i~~l~~~~~~~li~D~~ 182 (376)
T 3f0h_A 163 TMMIGEFCKKNNMFFVCDCV 182 (376)
T ss_dssp HHHHHHHHHHTTCEEEEECT
T ss_pred HHHHHHHHHHcCCEEEEEcC
Confidence 56777888899999999963
No 96
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=29.67 E-value=35 Score=26.94 Aligned_cols=121 Identities=12% Similarity=-0.035 Sum_probs=64.1
Q ss_pred EEeeCCCHH-HHHHHHHHHHCCCCccceEEcCCCCceEE-E--EEE---ecCC-CceEEEecCCCcccccCcccchHh-h
Q 025807 81 VGKLGDDEF-GYMLANILKENNVDTSGVRYDSTARTALA-F--VTL---RADG-EREFLFFRHPSADMLLCESELDKN-L 151 (248)
Q Consensus 81 ~~~vG~D~~-g~~i~~~L~~~gI~~~~v~~~~~~~T~~~-~--i~i---~~~g-~r~~~~~~~~~~~~~~~~~~~~~~-~ 151 (248)
-+.+..|.. =..-.+.+++.|++.-++.+-++...+-. + -.+ .+.. +..+... ....+++.+-.. .
T Consensus 32 pSilsaD~~~L~~~i~~l~~~G~d~lHvDVmDg~FVpnit~G~~~v~~lr~~~p~~~ldvH-----Lmv~~p~~~i~~~~ 106 (246)
T 3inp_A 32 PSILSADLARLGDDVKAVLAAGADNIHFDVMDNHYVPNLTFGPMVLKALRDYGITAGMDVH-----LMVKPVDALIESFA 106 (246)
T ss_dssp EBGGGSCGGGHHHHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHHHHTCCSCEEEE-----EECSSCHHHHHHHH
T ss_pred hhhhcCChhhHHHHHHHHHHcCCCEEEEEecCCCcCcchhcCHHHHHHHHHhCCCCeEEEE-----EeeCCHHHHHHHHH
Confidence 344666742 13445677888998877766555322110 0 001 1111 1222111 001122222222 2
Q ss_pred hcCccEEEEcccccccchhHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHhhhhCCEEE
Q 025807 152 IKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIK 220 (248)
Q Consensus 152 ~~~~~~v~~~g~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~w~~~~~~~~~~~~~l~~~dil~ 220 (248)
-.++|++++-.-.. +.....++.+++.|+++.+.+++.-+ .+.++++++.+|++.
T Consensus 107 ~aGAd~itvH~Ea~------~~~~~~i~~ir~~G~k~Gvalnp~Tp--------~e~l~~~l~~vD~Vl 161 (246)
T 3inp_A 107 KAGATSIVFHPEAS------EHIDRSLQLIKSFGIQAGLALNPATG--------IDCLKYVESNIDRVL 161 (246)
T ss_dssp HHTCSEEEECGGGC------SCHHHHHHHHHTTTSEEEEEECTTCC--------SGGGTTTGGGCSEEE
T ss_pred HcCCCEEEEccccc------hhHHHHHHHHHHcCCeEEEEecCCCC--------HHHHHHHHhcCCEEE
Confidence 35799998754211 23457888889999998887776433 235567888889885
No 97
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=29.54 E-value=79 Score=26.72 Aligned_cols=40 Identities=15% Similarity=0.087 Sum_probs=23.9
Q ss_pred CccEEEEccccc-ccchhHHHHHHHHHHHHH--CCCeEEEeCCCC
Q 025807 154 QGSIFHYGSISL-IAEPCRSTQLAAMNLAKE--SGSILSYDPNLR 195 (248)
Q Consensus 154 ~~~~v~~~g~~~-~~~~~~~~~~~~~~~a~~--~g~~v~~D~~~~ 195 (248)
+.++|++....- ..... .+.++.+.|++ +|+.+++|-...
T Consensus 167 ~tklV~~e~~~NptG~v~--dl~~I~~la~~~~~g~~livD~a~a 209 (415)
T 2fq6_A 167 NTKIVFLESPGSITMEVH--DVPAIVAAVRSVVPDAIIMIDNTWA 209 (415)
T ss_dssp TEEEEEEESSCTTTCCCC--CHHHHHHHHHHHCTTCEEEEECTTT
T ss_pred CCcEEEEECCCCCCCEee--cHHHHHHHHHhhcCCCEEEEECCCc
Confidence 456777654321 11111 13577777888 899999888643
No 98
>2yx6_A Hypothetical protein PH0822; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; HET: ADP; 2.00A {Pyrococcus horikoshii}
Probab=29.33 E-value=24 Score=24.14 Aligned_cols=34 Identities=9% Similarity=0.122 Sum_probs=28.0
Q ss_pred HHHHHHHHcCCceeEEEeeCCCHHHHHHHHHHHHCCCCc
Q 025807 66 NVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDT 104 (248)
Q Consensus 66 N~a~ala~lG~~v~l~~~vG~D~~g~~i~~~L~~~gI~~ 104 (248)
..+..|+..|+++.+++.+|.. ..+.|++.||++
T Consensus 54 ~~~~~L~~~gv~~vi~~~iG~~-----a~~~L~~~GI~v 87 (121)
T 2yx6_A 54 DLPNFIKDHGAKIVLTYGIGRR-----AIEYFNSLGISV 87 (121)
T ss_dssp HHHHHHHHTTCCEEECSBCCHH-----HHHHHHHTTCEE
T ss_pred HHHHHHHHcCCCEEEECCCCHh-----HHHHHHHCCCEE
Confidence 6777788889999999988655 568889999984
No 99
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=29.01 E-value=93 Score=26.07 Aligned_cols=39 Identities=10% Similarity=0.089 Sum_probs=23.0
Q ss_pred cCccEEEEccccc-ccchhHHHHHHHHHHHHHCCCeEEEeCC
Q 025807 153 KQGSIFHYGSISL-IAEPCRSTQLAAMNLAKESGSILSYDPN 193 (248)
Q Consensus 153 ~~~~~v~~~g~~~-~~~~~~~~~~~~~~~a~~~g~~v~~D~~ 193 (248)
++.+++++..... ..... .+.++.+.|+++|+.+++|-.
T Consensus 151 ~~~~~v~~e~~~np~G~~~--~l~~i~~la~~~g~~livDe~ 190 (400)
T 3nmy_A 151 ADTKMVWIETPTNPMLKLV--DIAAIAVIARKHGLLTVVDNT 190 (400)
T ss_dssp TTEEEEEEESSCTTTCCCC--CHHHHHHHHHHTTCEEEEECT
T ss_pred cCCCEEEEECCCCCCCeee--cHHHHHHHHHHcCCEEEEECC
Confidence 3456676654321 11111 145677778888988888875
No 100
>3iwt_A 178AA long hypothetical molybdenum cofactor biosy protein B; biosynthesis, structural genomics, UNKN function, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii}
Probab=28.52 E-value=1.7e+02 Score=21.24 Aligned_cols=34 Identities=9% Similarity=-0.010 Sum_probs=26.5
Q ss_pred hHHHHHHHHHHcCCceeEEEeeCCCHHHHHHHHHHH
Q 025807 63 APANVAVGISRLGGSSAFVGKLGDDEFGYMLANILK 98 (248)
Q Consensus 63 ~a~N~a~ala~lG~~v~l~~~vG~D~~g~~i~~~L~ 98 (248)
++...+..|..+|.++...+.|++|. +.+.+.++
T Consensus 41 ng~~L~~~L~~~G~~v~~~~iV~Dd~--~~i~~al~ 74 (178)
T 3iwt_A 41 SGDIIKQLLIENGHKIIGYSLVPDDK--IKILKAFT 74 (178)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEECSCH--HHHHHHHH
T ss_pred hHHHHHHHHHHCCCEEEEEEEeCCCH--HHHHHHHH
Confidence 35668888999999999999999995 34555554
No 101
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=28.47 E-value=1.8e+02 Score=23.09 Aligned_cols=64 Identities=11% Similarity=0.004 Sum_probs=41.4
Q ss_pred hhcCccEEEEcccccccchhHHHHHHHHHHHHHC-CCeEEEeCCCCCCCCCCHHHHHHHHHHhhhhCCEEE-eCH
Q 025807 151 LIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKES-GSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIK-VKF 223 (248)
Q Consensus 151 ~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~a~~~-g~~v~~D~~~~~~~w~~~~~~~~~~~~~l~~~dil~-~N~ 223 (248)
.-.++|++-+++-+. .+...+.+..+++..++. ++++++|... .+..+..++. ++.++++- +|.
T Consensus 44 v~~GAdiIDIg~~s~-~~eE~~rv~~vi~~l~~~~~~pisIDT~~-------~~v~~aal~a-~~Ga~iINdvs~ 109 (271)
T 2yci_X 44 AEKGAHYLDVNTGPT-ADDPVRVMEWLVKTIQEVVDLPCCLDSTN-------PDAIEAGLKV-HRGHAMINSTSA 109 (271)
T ss_dssp HHTTCSEEEEECCSC-SSCHHHHHHHHHHHHHHHCCCCEEEECSC-------HHHHHHHHHH-CCSCCEEEEECS
T ss_pred HHCCCCEEEEcCCcC-chhHHHHHHHHHHHHHHhCCCeEEEeCCC-------HHHHHHHHHh-CCCCCEEEECCC
Confidence 347899999998653 223456777788877765 8999999953 3333444332 24577775 444
No 102
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=28.07 E-value=1.8e+02 Score=23.34 Aligned_cols=19 Identities=11% Similarity=0.214 Sum_probs=14.0
Q ss_pred HHHHHHHHHCC--CeEEEeCC
Q 025807 175 LAAMNLAKESG--SILSYDPN 193 (248)
Q Consensus 175 ~~~~~~a~~~g--~~v~~D~~ 193 (248)
.++.+.|+++| +.+++|-.
T Consensus 159 ~~i~~l~~~~~~~~~li~Dea 179 (384)
T 1eg5_A 159 EDVTRIVKKKNKETLVHVDAV 179 (384)
T ss_dssp HHHHHHHHHHCTTCEEEEECT
T ss_pred HHHHHHHHhcCCceEEEEEhh
Confidence 46666677778 88888864
No 103
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=27.92 E-value=2.3e+02 Score=22.65 Aligned_cols=51 Identities=8% Similarity=-0.087 Sum_probs=31.2
Q ss_pred CcccchHhhhcCccEEEEccccc-c-cchhHHHHHHHHHHHHHCCCeEEEeCC
Q 025807 143 CESELDKNLIKQGSIFHYGSISL-I-AEPCRSTQLAAMNLAKESGSILSYDPN 193 (248)
Q Consensus 143 ~~~~~~~~~~~~~~~v~~~g~~~-~-~~~~~~~~~~~~~~a~~~g~~v~~D~~ 193 (248)
+.+.+....-++.+++.+..... . .-.+.+.+.++++.|+++|+.+++|-.
T Consensus 139 d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~ 191 (377)
T 3fdb_A 139 NLHDVEKGFQAGARSILLCNPYNPLGMVFAPEWLNELCDLAHRYDARVLVDEI 191 (377)
T ss_dssp CHHHHHHHHHTTCCEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECT
T ss_pred CHHHHHHHhccCCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcc
Confidence 44444433334566776654321 1 123446688888999999999999964
No 104
>2dha_A FLJ20171 protein; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.79 E-value=1.1e+02 Score=20.89 Aligned_cols=45 Identities=13% Similarity=0.045 Sum_probs=34.2
Q ss_pred ccCCChHHHHHHHHHHcCCceeEEEeeCCCHHHHHHHHHHHHCCC
Q 025807 58 KAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNV 102 (248)
Q Consensus 58 ~~~GG~a~N~a~ala~lG~~v~l~~~vG~D~~g~~i~~~L~~~gI 102 (248)
...||..-.....+..-...+.+++.+.-+..-+.|++.+...|.
T Consensus 5 ~~~~g~~~~~~~~~~~~~~~~v~V~nLp~~~te~dl~~~F~~~g~ 49 (123)
T 2dha_A 5 SSGGGTSNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFFGQHCP 49 (123)
T ss_dssp SSSCCCCHHHHHHHHCCSCCEEEECSCCTTCCHHHHHHHHHTTSC
T ss_pred CCCCCCchhHHhhccCCCCCEEEEeCCCCCCCHHHHHHHHHhhCC
Confidence 456777666666666555668888989888788889999999873
No 105
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=27.72 E-value=41 Score=28.82 Aligned_cols=22 Identities=18% Similarity=0.249 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHHCCCeEEEeC
Q 025807 171 RSTQLAAMNLAKESGSILSYDP 192 (248)
Q Consensus 171 ~~~~~~~~~~a~~~g~~v~~D~ 192 (248)
.+...+++++|+++|++|++|.
T Consensus 64 ~~dfk~Lv~~aH~~Gi~VilD~ 85 (448)
T 1g94_A 64 RAQFIDMVNRCSAAGVDIYVDT 85 (448)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEE
Confidence 4677899999999999999997
No 106
>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} PDB: 3iwt_A*
Probab=27.69 E-value=1.4e+02 Score=22.02 Aligned_cols=35 Identities=9% Similarity=0.016 Sum_probs=27.0
Q ss_pred hHHHHHHHHHHcCCceeEEEeeCCCHHHHHHHHHHHH
Q 025807 63 APANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKE 99 (248)
Q Consensus 63 ~a~N~a~ala~lG~~v~l~~~vG~D~~g~~i~~~L~~ 99 (248)
++...+..|..+|.++...+.+++|. +.|.+.+++
T Consensus 41 n~~~L~~~l~~~G~~v~~~~iv~Dd~--~~I~~al~~ 75 (178)
T 2pjk_A 41 SGDIIKQLLIENGHKIIGYSLVPDDK--IKILKAFTD 75 (178)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEECSCH--HHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEEEEeCCCH--HHHHHHHHH
Confidence 45667888889999999999999995 445555554
No 107
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=27.02 E-value=1.1e+02 Score=24.54 Aligned_cols=16 Identities=13% Similarity=0.167 Sum_probs=8.1
Q ss_pred HHHHHHHHCCCeEEEeC
Q 025807 176 AAMNLAKESGSILSYDP 192 (248)
Q Consensus 176 ~~~~~a~~~g~~v~~D~ 192 (248)
++.+.|+++|+ +++|-
T Consensus 159 ~i~~l~~~~~~-li~D~ 174 (382)
T 4hvk_A 159 EISEVLAGKAA-LHIDA 174 (382)
T ss_dssp HHHHHHSSSSE-EEEEC
T ss_pred HHHHHHHHcCE-EEEEh
Confidence 44444555555 55554
No 108
>3c8f_A Pyruvate formate-lyase 1-activating enzyme; adoMet radical, SAM radical, activase, glycyl radical, 4Fe- 4S, carbohydrate metabolism, cytoplasm; HET: MT2 PGE; 2.25A {Escherichia coli} PDB: 3cb8_A*
Probab=26.97 E-value=1.8e+02 Score=21.73 Aligned_cols=68 Identities=12% Similarity=-0.053 Sum_probs=39.6
Q ss_pred cEEEEcccccccchhHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHhhhhCCEEEe-----CHHHHHHhH
Q 025807 156 SIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKV-----KFETRYSCI 230 (248)
Q Consensus 156 ~~v~~~g~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~w~~~~~~~~~~~~~l~~~dil~~-----N~~E~~~l~ 230 (248)
..++++| ..+-...+.+.++++.+++.|..+.+..+..... . .+.+..+++.+|.+.+ +++....+.
T Consensus 71 ~~i~~~G--GEP~l~~~~l~~l~~~~~~~~~~i~i~Tng~~~~--~----~~~~~~l~~~~~~v~isld~~~~~~~~~~~ 142 (245)
T 3c8f_A 71 GGVTASG--GEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRR--Y----DPVIDELLEVTDLVMLDLKQMNDEIHQNLV 142 (245)
T ss_dssp CEEEEEE--SCGGGGHHHHHHHHHHHHTTTCCEEEEECCCCCC--C----CHHHHHHHHTCSEEEEECCCSSHHHHHHHH
T ss_pred CeEEEEC--CCcCCCHHHHHHHHHHHHHcCCcEEEEeCCCcCc--C----HHHHHHHHHhCCEEEEeCCCCCHHHhhhcc
Confidence 5666665 2222334557889999999999888888653200 1 1234445555676655 455555554
Q ss_pred H
Q 025807 231 Q 231 (248)
Q Consensus 231 g 231 (248)
|
T Consensus 143 ~ 143 (245)
T 3c8f_A 143 G 143 (245)
T ss_dssp S
T ss_pred C
Confidence 3
No 109
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=26.67 E-value=2.5e+02 Score=22.52 Aligned_cols=40 Identities=10% Similarity=-0.058 Sum_probs=24.5
Q ss_pred cCccEEEEccccc-ccchhHHHHHHHHHHHHHCCCeEEEeCCC
Q 025807 153 KQGSIFHYGSISL-IAEPCRSTQLAAMNLAKESGSILSYDPNL 194 (248)
Q Consensus 153 ~~~~~v~~~g~~~-~~~~~~~~~~~~~~~a~~~g~~v~~D~~~ 194 (248)
.+.++++++.... .+.. ..+.++.+.|+++|+.+++|-..
T Consensus 145 ~~~~~v~~~~~~nptG~~--~~l~~i~~l~~~~~~~li~D~a~ 185 (386)
T 2dr1_A 145 PDVEAVTITYNETSTGVL--NPLPELAKVAKEHDKLVFVDAVS 185 (386)
T ss_dssp TTCCEEEEESEETTTTEE--CCHHHHHHHHHHTTCEEEEECTT
T ss_pred CCCcEEEEEeecCCcchh--CCHHHHHHHHHHcCCeEEEEccc
Confidence 3567777764321 1111 11467778888899999988753
No 110
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=26.65 E-value=2e+02 Score=23.81 Aligned_cols=21 Identities=14% Similarity=0.121 Sum_probs=14.0
Q ss_pred HHHHHHHHHH-CCCeEEEeCCC
Q 025807 174 QLAAMNLAKE-SGSILSYDPNL 194 (248)
Q Consensus 174 ~~~~~~~a~~-~g~~v~~D~~~ 194 (248)
+.++.+.|++ +|+.+++|-..
T Consensus 166 l~~i~~la~~~~~~~li~De~~ 187 (404)
T 1e5e_A 166 MERVCKDAHSQEGVLVIADNTF 187 (404)
T ss_dssp HHHHHHHHHTSTTCEEEEECTT
T ss_pred HHHHHHHHHhhcCCEEEEECCC
Confidence 4566666777 77777777653
No 111
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=26.31 E-value=58 Score=25.25 Aligned_cols=54 Identities=11% Similarity=0.044 Sum_probs=36.4
Q ss_pred cCccEEEEcccccccchhHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHhhhhCCEEE
Q 025807 153 KQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIK 220 (248)
Q Consensus 153 ~~~~~v~~~g~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~w~~~~~~~~~~~~~l~~~dil~ 220 (248)
.++|++++-.-.. +.....++.+++.|+++.+.+++.-+ .+.++++++.+|++.
T Consensus 86 aGad~itvH~Ea~------~~~~~~i~~i~~~G~k~gval~p~t~--------~e~l~~~l~~~D~Vl 139 (228)
T 3ovp_A 86 AGANQYTFHLEAT------ENPGALIKDIRENGMKVGLAIKPGTS--------VEYLAPWANQIDMAL 139 (228)
T ss_dssp HTCSEEEEEGGGC------SCHHHHHHHHHHTTCEEEEEECTTSC--------GGGTGGGGGGCSEEE
T ss_pred cCCCEEEEccCCc------hhHHHHHHHHHHcCCCEEEEEcCCCC--------HHHHHHHhccCCeEE
Confidence 5789998743211 13457888889999988877765433 234567778888875
No 112
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=26.25 E-value=1.3e+02 Score=22.01 Aligned_cols=35 Identities=6% Similarity=0.059 Sum_probs=26.2
Q ss_pred hHHHHHHHHHHcCCceeEEEeeCCCHHHHHHHHHHHH
Q 025807 63 APANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKE 99 (248)
Q Consensus 63 ~a~N~a~ala~lG~~v~l~~~vG~D~~g~~i~~~L~~ 99 (248)
++...+..|..+|.++...+.|++|. +.|.+.+++
T Consensus 29 n~~~l~~~L~~~G~~v~~~~iv~Dd~--~~i~~~l~~ 63 (172)
T 1mkz_A 29 SGHYLRDSAQEAGHHVVDKAIVKENR--YAIRAQVSA 63 (172)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEECSCH--HHHHHHHHH
T ss_pred cHHHHHHHHHHCCCeEeEEEEeCCCH--HHHHHHHHH
Confidence 45567788888899999999999995 345555544
No 113
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=25.96 E-value=47 Score=28.37 Aligned_cols=23 Identities=13% Similarity=0.076 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHHCCCeEEEeCC
Q 025807 171 RSTQLAAMNLAKESGSILSYDPN 193 (248)
Q Consensus 171 ~~~~~~~~~~a~~~g~~v~~D~~ 193 (248)
.+...++++.|+++|++|++|.-
T Consensus 69 ~~df~~lv~~aH~~Gi~VilD~V 91 (441)
T 1lwj_A 69 EREFKEMIEAFHDSGIKVVLDLP 91 (441)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEeC
Confidence 46778999999999999999984
No 114
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=25.74 E-value=1.7e+02 Score=22.72 Aligned_cols=66 Identities=8% Similarity=-0.091 Sum_probs=45.9
Q ss_pred hhcCccEEEEcccccccchhHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHhhhhCCEEEe----CHHHH
Q 025807 151 LIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKV----KFETR 226 (248)
Q Consensus 151 ~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~w~~~~~~~~~~~~~l~~~dil~~----N~~E~ 226 (248)
...+.|.+.++|.. ....+.+.+++++.++..+++++-|+.. ..+.+.+|.+++ |.+..
T Consensus 28 ~~~GtD~i~vGGs~---gvt~~~~~~~v~~ik~~~~Pvvlfp~~~--------------~~v~~gaD~~l~pslln~~~~ 90 (228)
T 3vzx_A 28 CESGTDAVIIGGSD---GVTEDNVLRMMSKVRRFLVPCVLEVSAI--------------EAIVPGFDLYFIPSVLNSKNA 90 (228)
T ss_dssp HTSSCSEEEECCCS---CCCHHHHHHHHHHHTTSSSCEEEECSCG--------------GGCCSCCSEEEEEEETTBSSG
T ss_pred HHcCCCEEEECCcC---CCCHHHHHHHHHHhhccCCCEEEeCCCH--------------HHccccCCEEEEeeecCCCCc
Confidence 45679999999853 2345778889999988899999999752 224567887763 66555
Q ss_pred HHhHHHH
Q 025807 227 YSCIQKM 233 (248)
Q Consensus 227 ~~l~g~~ 233 (248)
..+.|..
T Consensus 91 ~~i~g~~ 97 (228)
T 3vzx_A 91 DWIVGMH 97 (228)
T ss_dssp GGTTHHH
T ss_pred chhhhHH
Confidence 5555543
No 115
>1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1
Probab=25.74 E-value=53 Score=28.43 Aligned_cols=23 Identities=13% Similarity=0.020 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHHCCCeEEEeCC
Q 025807 171 RSTQLAAMNLAKESGSILSYDPN 193 (248)
Q Consensus 171 ~~~~~~~~~~a~~~g~~v~~D~~ 193 (248)
.+...+++++|+++|++|++|.-
T Consensus 81 ~~d~~~Lv~~aH~~Gi~VilD~V 103 (488)
T 1wza_A 81 LEDFHKLVEAAHQRGIKVIIDLP 103 (488)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHHHHHCCCEEEEEec
Confidence 46788999999999999999994
No 116
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A*
Probab=25.44 E-value=48 Score=28.72 Aligned_cols=22 Identities=32% Similarity=0.214 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHHCCCeEEEeC
Q 025807 171 RSTQLAAMNLAKESGSILSYDP 192 (248)
Q Consensus 171 ~~~~~~~~~~a~~~g~~v~~D~ 192 (248)
.+...+++++|+++|++|++|.
T Consensus 82 ~~df~~Lv~~aH~~Gi~VilD~ 103 (485)
T 1wpc_A 82 RSQLQAAVTSLKNNGIQVYGDV 103 (485)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEE
Confidence 4677899999999999999997
No 117
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=25.27 E-value=2.7e+02 Score=22.46 Aligned_cols=43 Identities=12% Similarity=0.118 Sum_probs=29.3
Q ss_pred hhcCccEEEEccccccc-------chhHHHHHHHHHHHHHCCCeEEEeCC
Q 025807 151 LIKQGSIFHYGSISLIA-------EPCRSTQLAAMNLAKESGSILSYDPN 193 (248)
Q Consensus 151 ~~~~~~~v~~~g~~~~~-------~~~~~~~~~~~~~a~~~g~~v~~D~~ 193 (248)
.-+++|++-+++-+..+ +...+.+..+++..++.++++++|..
T Consensus 56 v~~GAdiIDIGgeSTrPga~~v~~~eE~~Rv~pvi~~l~~~~vpiSIDT~ 105 (294)
T 2y5s_A 56 IAEGADLLDIGGESTRPGAPPVPLDEELARVIPLVEALRPLNVPLSIDTY 105 (294)
T ss_dssp HHTTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHGGGCSCEEEECC
T ss_pred HHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHhhCCCeEEEECC
Confidence 45789999999854322 22234455677777666899999985
No 118
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A
Probab=25.25 E-value=48 Score=28.63 Aligned_cols=22 Identities=14% Similarity=-0.007 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHHCCCeEEEeC
Q 025807 171 RSTQLAAMNLAKESGSILSYDP 192 (248)
Q Consensus 171 ~~~~~~~~~~a~~~g~~v~~D~ 192 (248)
.+...+++++|+++|++|++|.
T Consensus 80 ~~df~~lv~~aH~~Gi~VilD~ 101 (480)
T 1ud2_A 80 KAQLERAIGSLKSNDINVYGDV 101 (480)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEE
Confidence 4677899999999999999997
No 119
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=25.17 E-value=3e+02 Score=22.94 Aligned_cols=91 Identities=16% Similarity=0.218 Sum_probs=48.5
Q ss_pred EEeeC-CCHHHHHHHHHHHHCCCCccceE-EcCCCCceEEEEEEecCCCceEEEecCCCcccccCcccchHhhhcCccEE
Q 025807 81 VGKLG-DDEFGYMLANILKENNVDTSGVR-YDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIF 158 (248)
Q Consensus 81 ~~~vG-~D~~g~~i~~~L~~~gI~~~~v~-~~~~~~T~~~~i~i~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 158 (248)
++.+| ....|..+++.|.+.+....-+. .......+..+.+ .|. + +..+.++.+.++++|++
T Consensus 5 VaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~~saG~~~~~---~~~-----------~--~~~~~~~~~~~~~~Dvv 68 (366)
T 3pwk_A 5 VAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLKF---KDQ-----------D--ITIEETTETAFEGVDIA 68 (366)
T ss_dssp EEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECTTTTTCEEEE---TTE-----------E--EEEEECCTTTTTTCSEE
T ss_pred EEEECCCChHHHHHHHHHhcCCCCcEEEEEEEccccCCCccee---cCC-----------C--ceEeeCCHHHhcCCCEE
Confidence 56777 67789999999998654321111 1122222222221 111 1 11111222235688999
Q ss_pred EEcccccccchhHHHHHHHHHHHHHCCCeEEEeCCCC
Q 025807 159 HYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLR 195 (248)
Q Consensus 159 ~~~g~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~ 195 (248)
+++. +.....+++..+.+.|++ ++|.+..
T Consensus 69 f~a~-------~~~~s~~~a~~~~~~G~~-vIDlSa~ 97 (366)
T 3pwk_A 69 LFSA-------GSSTSAKYAPYAVKAGVV-VVDNTSY 97 (366)
T ss_dssp EECS-------CHHHHHHHHHHHHHTTCE-EEECSST
T ss_pred EECC-------ChHhHHHHHHHHHHCCCE-EEEcCCc
Confidence 7763 234456777777788885 5677643
No 120
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A
Probab=25.06 E-value=49 Score=28.62 Aligned_cols=22 Identities=14% Similarity=0.006 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHHCCCeEEEeC
Q 025807 171 RSTQLAAMNLAKESGSILSYDP 192 (248)
Q Consensus 171 ~~~~~~~~~~a~~~g~~v~~D~ 192 (248)
.+...+++++|+++|++|++|.
T Consensus 78 ~~df~~lv~~aH~~Gi~VilD~ 99 (483)
T 3bh4_A 78 KSELQDAIGSLHSRNVQVYGDV 99 (483)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEE
Confidence 4677899999999999999997
No 121
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm}
Probab=24.96 E-value=48 Score=28.93 Aligned_cols=23 Identities=17% Similarity=0.003 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHCCCeEEEeCC
Q 025807 171 RSTQLAAMNLAKESGSILSYDPN 193 (248)
Q Consensus 171 ~~~~~~~~~~a~~~g~~v~~D~~ 193 (248)
.+...+++++|+++|++|++|.-
T Consensus 79 ~~dfk~Lv~~aH~~Gi~VilD~V 101 (549)
T 4aie_A 79 MADMDELISKAKEHHIKIVMDLV 101 (549)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEC
Confidence 36678999999999999999983
No 122
>1o13_A Probable NIFB protein; ribonuclease H-like motif fold, structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.83A {Thermotoga maritima} SCOP: c.55.5.1 PDB: 1t3v_A
Probab=24.93 E-value=24 Score=24.95 Aligned_cols=34 Identities=15% Similarity=0.160 Sum_probs=28.1
Q ss_pred HHHHHHHHcCCceeEEEeeCCCHHHHHHHHHHHHCCCCc
Q 025807 66 NVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDT 104 (248)
Q Consensus 66 N~a~ala~lG~~v~l~~~vG~D~~g~~i~~~L~~~gI~~ 104 (248)
..+..|+..|+++.+++.+|.. .++.|++.||++
T Consensus 67 ~~a~~L~~~gv~vVI~g~IG~~-----a~~~L~~~GI~v 100 (136)
T 1o13_A 67 AVPNFVKEKGAELVIVRGIGRR-----AIAAFEAMGVKV 100 (136)
T ss_dssp CHHHHHHHTTCSEEECSCCCHH-----HHHHHHHTTCEE
T ss_pred HHHHHHHHCCCCEEEECCCCHH-----HHHHHHHCCCEE
Confidence 6777788889999999988665 568899999984
No 123
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A
Probab=24.52 E-value=53 Score=28.44 Aligned_cols=23 Identities=9% Similarity=0.027 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHHHCCCeEEEeCC
Q 025807 171 RSTQLAAMNLAKESGSILSYDPN 193 (248)
Q Consensus 171 ~~~~~~~~~~a~~~g~~v~~D~~ 193 (248)
.+...+++++|+++|++|++|.-
T Consensus 102 ~~df~~Lv~~aH~~Gi~VilD~V 124 (488)
T 2wc7_A 102 NEAFKELLDAAHQRNIKVVLDGV 124 (488)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEeC
Confidence 46778999999999999999983
No 124
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=24.47 E-value=1.1e+02 Score=25.35 Aligned_cols=41 Identities=7% Similarity=0.053 Sum_probs=24.9
Q ss_pred cCccEEEEccccc-ccchhHHHHHHHHHHHHHCCCeEEEeCCCC
Q 025807 153 KQGSIFHYGSISL-IAEPCRSTQLAAMNLAKESGSILSYDPNLR 195 (248)
Q Consensus 153 ~~~~~v~~~g~~~-~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~ 195 (248)
++.+++++..... .... ..+.++.+.|+++|+.+++|-...
T Consensus 150 ~~~~~v~~~~~~nptG~~--~~l~~i~~la~~~g~~li~D~~~~ 191 (392)
T 3qhx_A 150 PTTRLIWVETPTNPLLSI--ADIAGIAQLGADSSAKVLVDNTFA 191 (392)
T ss_dssp TTEEEEEEESSCTTTCCC--CCHHHHHHHHHHHTCEEEEECTTT
T ss_pred CCCeEEEEECCCCCCcEE--ecHHHHHHHHHHcCCEEEEECCCc
Confidence 3566777644321 1111 115577778888999999997543
No 125
>3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A*
Probab=24.42 E-value=54 Score=26.46 Aligned_cols=24 Identities=4% Similarity=-0.003 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHCCCeEEEeCCCC
Q 025807 172 STQLAAMNLAKESGSILSYDPNLR 195 (248)
Q Consensus 172 ~~~~~~~~~a~~~g~~v~~D~~~~ 195 (248)
+.+.++++.|+++|+.|++|+...
T Consensus 82 ~~~d~~v~~a~~~Gi~vildlh~~ 105 (320)
T 3nco_A 82 DRVKHVVDVALKNDLVVIINCHHF 105 (320)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCCC
T ss_pred HHHHHHHHHHHHCCCEEEEEcCCC
Confidence 555688999999999999999753
No 126
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=24.40 E-value=52 Score=27.73 Aligned_cols=22 Identities=9% Similarity=-0.034 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHHHCCCeEEEeC
Q 025807 171 RSTQLAAMNLAKESGSILSYDP 192 (248)
Q Consensus 171 ~~~~~~~~~~a~~~g~~v~~D~ 192 (248)
.+..+++++.|+++|++|++|.
T Consensus 68 ~~d~~~lv~~~h~~Gi~VilD~ 89 (405)
T 1ht6_A 68 AAELKSLIGALHGKGVQAIADI 89 (405)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEE
Confidence 4677899999999999999997
No 127
>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A
Probab=24.38 E-value=3e+02 Score=22.69 Aligned_cols=88 Identities=13% Similarity=0.147 Sum_probs=47.8
Q ss_pred EEeeC-CCHHHHHHHHHHHHCCC---CccceEEcCCCCceEEEEEEecCCCceEEEecCCCcccccCcccchHhhhcCcc
Q 025807 81 VGKLG-DDEFGYMLANILKENNV---DTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGS 156 (248)
Q Consensus 81 ~~~vG-~D~~g~~i~~~L~~~gI---~~~~v~~~~~~~T~~~~i~i~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (248)
++.+| ...-|..+++.|.++.. +...+ .+....|..+.+ .|. .. ..+.++.+.++++|
T Consensus 4 VaIvGatG~vG~el~~lL~~h~fp~~el~~~--~s~~~aG~~~~~---~~~-~~------------~~~~~~~~~~~~~D 65 (344)
T 3tz6_A 4 IGIVGATGQVGQVMRTLLDERDFPASAVRFF--ASARSQGRKLAF---RGQ-EI------------EVEDAETADPSGLD 65 (344)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCCEEEEEEE--ECTTTSSCEEEE---TTE-EE------------EEEETTTSCCTTCS
T ss_pred EEEECCCChHHHHHHHHHHhCCCCceEEEEE--ECcccCCCceee---cCC-ce------------EEEeCCHHHhccCC
Confidence 56677 56779999999998742 22222 222233333321 121 11 11111122346789
Q ss_pred EEEEcccccccchhHHHHHHHHHHHHHCCCeEEEeCCC
Q 025807 157 IFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNL 194 (248)
Q Consensus 157 ~v~~~g~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~ 194 (248)
+++++. +.....++.....+.|++ ++|.+.
T Consensus 66 vvf~a~-------~~~~s~~~a~~~~~~G~~-vID~Sa 95 (344)
T 3tz6_A 66 IALFSA-------GSAMSKVQAPRFAAAGVT-VIDNSS 95 (344)
T ss_dssp EEEECS-------CHHHHHHHHHHHHHTTCE-EEECSS
T ss_pred EEEECC-------ChHHHHHHHHHHHhCCCE-EEECCC
Confidence 997763 234456677777788874 666654
No 128
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=23.85 E-value=78 Score=22.67 Aligned_cols=41 Identities=12% Similarity=0.050 Sum_probs=30.3
Q ss_pred HHHHHHHHHHcCCceeEEEeeC--------------------CCHHHHHHHHHHHHCCCCc
Q 025807 64 PANVAVGISRLGGSSAFVGKLG--------------------DDEFGYMLANILKENNVDT 104 (248)
Q Consensus 64 a~N~a~ala~lG~~v~l~~~vG--------------------~D~~g~~i~~~L~~~gI~~ 104 (248)
|.-+|..|+++|.++.++-.-. .....+.+.+.+++.||++
T Consensus 13 Gl~~A~~l~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~v 73 (180)
T 2ywl_A 13 GLSAALFLARAGLKVLVLDGGRSKVKGVSRVPNYPGLLDEPSGEELLRRLEAHARRYGAEV 73 (180)
T ss_dssp HHHHHHHHHHTTCCEEEEECSCCTTTTCSCCCCSTTCTTCCCHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHCCCcEEEEeCCCCcccCchhhhccCCCcCCCCHHHHHHHHHHHHHHcCCEE
Confidence 5678888999999999987421 1235677788888888864
No 129
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A*
Probab=23.84 E-value=54 Score=28.00 Aligned_cols=22 Identities=14% Similarity=0.117 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHHCCCeEEEeC
Q 025807 171 RSTQLAAMNLAKESGSILSYDP 192 (248)
Q Consensus 171 ~~~~~~~~~~a~~~g~~v~~D~ 192 (248)
.+..++++++|+++|++|++|.
T Consensus 86 ~~df~~lv~~~H~~Gi~VilD~ 107 (435)
T 1mxg_A 86 KEELVRLIQTAHAYGIKVIADV 107 (435)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEE
Confidence 4777899999999999999997
No 130
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=23.72 E-value=1.9e+02 Score=23.47 Aligned_cols=39 Identities=8% Similarity=-0.088 Sum_probs=22.4
Q ss_pred CccEEEEccccc-ccchhHHHHHHHHHHHHHCCCeEEEeCCC
Q 025807 154 QGSIFHYGSISL-IAEPCRSTQLAAMNLAKESGSILSYDPNL 194 (248)
Q Consensus 154 ~~~~v~~~g~~~-~~~~~~~~~~~~~~~a~~~g~~v~~D~~~ 194 (248)
+.++++++.... .+.... +.++.+.|+++|+.+++|-..
T Consensus 143 ~~~~v~~~~~~nptG~~~~--~~~i~~l~~~~~~~li~Dea~ 182 (396)
T 2ch1_A 143 QPKCLFLTHGDSSSGLLQP--LEGVGQICHQHDCLLIVDAVA 182 (396)
T ss_dssp CCSEEEEESEETTTTEECC--CTTHHHHHHHTTCEEEEECTT
T ss_pred CCCEEEEECCCCCCceecC--HHHHHHHHHHcCCEEEEEccc
Confidence 567777753211 111100 346777778888888888753
No 131
>4dgh_A Sulfate permease family protein; STAS domain, anion exchange, membrane, transport protein; HET: MSE; 1.90A {Vibrio cholerae} PDB: 3mgl_A*
Probab=23.68 E-value=1.7e+02 Score=19.71 Aligned_cols=70 Identities=11% Similarity=0.052 Sum_probs=39.5
Q ss_pred CccEEEE--cccccccchhHHHHHHHHHHHHHCCCeEEEe-CCCCCCCCCCHHHHHHHHHH--hhhh--CCEEEeCHHHH
Q 025807 154 QGSIFHY--GSISLIAEPCRSTQLAAMNLAKESGSILSYD-PNLRLPLWPSEEAAREGIMS--IWDQ--ADIIKVKFETR 226 (248)
Q Consensus 154 ~~~~v~~--~g~~~~~~~~~~~~~~~~~~a~~~g~~v~~D-~~~~~~~w~~~~~~~~~~~~--~l~~--~dil~~N~~E~ 226 (248)
..+.+.+ ++....+......+..+.++++++|+.+.+- ++. ..++.+.. +... .+-++.+.+|+
T Consensus 48 ~~~~vvlDls~v~~iDssgl~~L~~~~~~~~~~g~~l~l~~~~~---------~v~~~l~~~gl~~~~~~~~i~~s~~~A 118 (130)
T 4dgh_A 48 TPQILILRLKWVPFMDITGIQTLEEMIQSFHKRGIKVLISGANS---------RVSQKLVKAGIVKLVGEQNVYPVFEGA 118 (130)
T ss_dssp CCSEEEEECTTCCCCCHHHHHHHHHHHHHHHTTTCEEEEECCCH---------HHHHHHHHTTHHHHHCGGGEESSHHHH
T ss_pred CCCEEEEECCCCCcccHHHHHHHHHHHHHHHHCCCEEEEEcCCH---------HHHHHHHHcCChhhcCcccccCCHHHH
Confidence 4455555 4444456566677788889999999877654 432 11222221 1111 12367888888
Q ss_pred HHhHHH
Q 025807 227 YSCIQK 232 (248)
Q Consensus 227 ~~l~g~ 232 (248)
-.....
T Consensus 119 l~~~~~ 124 (130)
T 4dgh_A 119 LSAALT 124 (130)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 765443
No 132
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1
Probab=23.59 E-value=54 Score=28.72 Aligned_cols=22 Identities=23% Similarity=0.279 Sum_probs=20.1
Q ss_pred HHHHHHHHHHHHHCCCeEEEeC
Q 025807 171 RSTQLAAMNLAKESGSILSYDP 192 (248)
Q Consensus 171 ~~~~~~~~~~a~~~g~~v~~D~ 192 (248)
.+..++++++|+++|++|++|.
T Consensus 81 ~~dfk~Lv~~aH~~Gi~VilD~ 102 (515)
T 1hvx_A 81 KAQYLQAIQAAHAAGMQVYADV 102 (515)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEE
Confidence 4778899999999999999997
No 133
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=23.49 E-value=1.2e+02 Score=24.46 Aligned_cols=69 Identities=13% Similarity=0.165 Sum_probs=39.6
Q ss_pred cCccEEEEcccccccchhHHHHHHHHHHHHHCCCe-EEEeCCCCCCCCCCHHHHHHHHHHhhhhCCEEEeCHHHHHHh
Q 025807 153 KQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSI-LSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVKFETRYSC 229 (248)
Q Consensus 153 ~~~~~v~~~g~~~~~~~~~~~~~~~~~~a~~~g~~-v~~D~~~~~~~w~~~~~~~~~~~~~l~~~dil~~N~~E~~~l 229 (248)
.+.|++|+....... .+...++..+++ +++........|......+.....++..+|.+++.-+.....
T Consensus 85 ~~~Dvv~~~~~~~~~--------~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~ 154 (394)
T 3okp_A 85 REIDNVWFGAAAPLA--------LMAGTAKQAGASKVIASTHGHEVGWSMLPGSRQSLRKIGTEVDVLTYISQYTLRR 154 (394)
T ss_dssp TTCSEEEESSCTTGG--------GGHHHHHHTTCSEEEEECCSTHHHHTTSHHHHHHHHHHHHHCSEEEESCHHHHHH
T ss_pred cCCCEEEECCcchHH--------HHHHHHHhcCCCcEEEEeccchhhhhhcchhhHHHHHHHHhCCEEEEcCHHHHHH
Confidence 468999976542211 122335566775 777775432212222334566677889999988765555443
No 134
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=23.44 E-value=2.8e+02 Score=22.09 Aligned_cols=43 Identities=16% Similarity=0.081 Sum_probs=27.2
Q ss_pred hhcCccEEEEccccccc-------chhHHHHHHHHHHHHHCCCeEEEeCC
Q 025807 151 LIKQGSIFHYGSISLIA-------EPCRSTQLAAMNLAKESGSILSYDPN 193 (248)
Q Consensus 151 ~~~~~~~v~~~g~~~~~-------~~~~~~~~~~~~~a~~~g~~v~~D~~ 193 (248)
.-+++|++-+++-+..+ +...+.+..+++..++.++++++|..
T Consensus 39 v~~GAdiIDIGgestrpga~~v~~~eE~~Rv~pvi~~l~~~~~piSIDT~ 88 (280)
T 1eye_A 39 AAAGAGIVDVGGESSRPGATRVDPAVETSRVIPVVKELAAQGITVSIDTM 88 (280)
T ss_dssp HHTTCSEEEEECC--------------HHHHHHHHHHHHHTTCCEEEECS
T ss_pred HHCCCCEEEECCccCCCCCCCCCHHHHHHHHHHHHHHhhcCCCEEEEeCC
Confidence 45789999999854221 22234455677777766899999984
No 135
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A
Probab=23.15 E-value=65 Score=27.41 Aligned_cols=23 Identities=13% Similarity=0.055 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHHHCCCeEEEeCC
Q 025807 171 RSTQLAAMNLAKESGSILSYDPN 193 (248)
Q Consensus 171 ~~~~~~~~~~a~~~g~~v~~D~~ 193 (248)
.+...++++.|+++|++|++|.-
T Consensus 81 ~~d~~~lv~~ah~~Gi~vilD~V 103 (424)
T 2dh2_A 81 KEDFDSLLQSAKKKSIRVILDLT 103 (424)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEC
Confidence 46778999999999999999983
No 136
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=23.06 E-value=86 Score=27.36 Aligned_cols=43 Identities=12% Similarity=0.192 Sum_probs=33.1
Q ss_pred hHHHHHHHHHHcCCceeEEEe---eC--CCHHHHHHHHHHHHCCCCcc
Q 025807 63 APANVAVGISRLGGSSAFVGK---LG--DDEFGYMLANILKENNVDTS 105 (248)
Q Consensus 63 ~a~N~a~ala~lG~~v~l~~~---vG--~D~~g~~i~~~L~~~gI~~~ 105 (248)
.+.-+|..++++|.+|.++.. +. +....+.+.+.|++.||++.
T Consensus 221 ig~E~A~~l~~~G~~Vtlv~~~~~l~~~d~~~~~~~~~~l~~~GV~v~ 268 (519)
T 3qfa_A 221 VALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHMEEHGIKFI 268 (519)
T ss_dssp HHHHHHHHHHHTTCCEEEEESSCSSTTSCHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHcCCeEEEEecccccccCCHHHHHHHHHHHHHCCCEEE
Confidence 356788889999999999875 11 22467888899999999864
No 137
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A
Probab=23.04 E-value=58 Score=28.08 Aligned_cols=22 Identities=23% Similarity=0.114 Sum_probs=20.1
Q ss_pred HHHHHHHHHHHHHCCCeEEEeC
Q 025807 171 RSTQLAAMNLAKESGSILSYDP 192 (248)
Q Consensus 171 ~~~~~~~~~~a~~~g~~v~~D~ 192 (248)
.+..++++++|+++|++|++|.
T Consensus 97 ~~df~~lv~~~H~~Gi~VilD~ 118 (478)
T 2guy_A 97 ADDLKALSSALHERGMYLMVDV 118 (478)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEE
Confidence 4778899999999999999997
No 138
>1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A*
Probab=23.03 E-value=55 Score=28.23 Aligned_cols=22 Identities=14% Similarity=0.137 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHHCCCeEEEeC
Q 025807 171 RSTQLAAMNLAKESGSILSYDP 192 (248)
Q Consensus 171 ~~~~~~~~~~a~~~g~~v~~D~ 192 (248)
.+..+++++.|+++|++|++|.
T Consensus 74 ~~d~~~lv~~~h~~Gi~VilD~ 95 (471)
T 1jae_A 74 ESAFTDMTRRCNDAGVRIYVDA 95 (471)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEE
Confidence 4778899999999999999997
No 139
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=22.83 E-value=2.1e+02 Score=22.03 Aligned_cols=63 Identities=13% Similarity=-0.020 Sum_probs=38.4
Q ss_pred cchHhhhcCccEEEEcccccccchhHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHhhhhCCEEEe
Q 025807 146 ELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKV 221 (248)
Q Consensus 146 ~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~w~~~~~~~~~~~~~l~~~dil~~ 221 (248)
++......++|.+.+.......+ +.+.++++.+++.|+.+..+... .++.... .-..+|++..
T Consensus 93 ~i~~~~~~Gad~V~l~~~~~~~p---~~l~~~i~~~~~~g~~v~~~v~t-------~eea~~a---~~~Gad~Ig~ 155 (232)
T 3igs_A 93 DVDALAQAGAAIIAVDGTARQRP---VAVEALLARIHHHHLLTMADCSS-------VDDGLAC---QRLGADIIGT 155 (232)
T ss_dssp HHHHHHHHTCSEEEEECCSSCCS---SCHHHHHHHHHHTTCEEEEECCS-------HHHHHHH---HHTTCSEEEC
T ss_pred HHHHHHHcCCCEEEECccccCCH---HHHHHHHHHHHHCCCEEEEeCCC-------HHHHHHH---HhCCCCEEEE
Confidence 33333456889888765422222 44567888888899999999863 2222221 2246888854
No 140
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=22.75 E-value=2.8e+02 Score=21.99 Aligned_cols=64 Identities=11% Similarity=0.110 Sum_probs=41.9
Q ss_pred cchHhhhcCccEEEEcccccccchhHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHhhhhCCEEEeCH
Q 025807 146 ELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVKF 223 (248)
Q Consensus 146 ~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~w~~~~~~~~~~~~~l~~~dil~~N~ 223 (248)
++.....-++|.+|+..-. .+.+.+.++++.+++.|..+.++++. .++..... -..+|++-+|.
T Consensus 127 qv~~A~~~GAD~VlLi~a~----l~~~~l~~l~~~a~~lGl~~lvev~t-------~ee~~~A~---~~Gad~IGv~~ 190 (272)
T 3qja_A 127 QIHEARAHGADMLLLIVAA----LEQSVLVSMLDRTESLGMTALVEVHT-------EQEADRAL---KAGAKVIGVNA 190 (272)
T ss_dssp HHHHHHHTTCSEEEEEGGG----SCHHHHHHHHHHHHHTTCEEEEEESS-------HHHHHHHH---HHTCSEEEEES
T ss_pred HHHHHHHcCCCEEEEeccc----CCHHHHHHHHHHHHHCCCcEEEEcCC-------HHHHHHHH---HCCCCEEEECC
Confidence 3444455789999884321 23456778899999999999888863 33332222 23688888874
No 141
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=22.74 E-value=83 Score=26.76 Aligned_cols=43 Identities=12% Similarity=0.254 Sum_probs=33.0
Q ss_pred hHHHHHHHHHHcCCceeEEEeeC-----CC-HHHHHHHHHHHHCCCCcc
Q 025807 63 APANVAVGISRLGGSSAFVGKLG-----DD-EFGYMLANILKENNVDTS 105 (248)
Q Consensus 63 ~a~N~a~ala~lG~~v~l~~~vG-----~D-~~g~~i~~~L~~~gI~~~ 105 (248)
.+.-+|..|+++|.+|.++..-. -| ...+.+.+.|++.||++.
T Consensus 181 ~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~ 229 (455)
T 1ebd_A 181 IGIELGTAYANFGTKVTILEGAGEILSGFEKQMAAIIKKRLKKKGVEVV 229 (455)
T ss_dssp HHHHHHHHHHHTTCEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHcCCcEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEE
Confidence 45678888999999999987532 13 367788899999999854
No 142
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=22.57 E-value=58 Score=28.63 Aligned_cols=22 Identities=18% Similarity=0.155 Sum_probs=20.1
Q ss_pred HHHHHHHHHHHHHCCCeEEEeC
Q 025807 171 RSTQLAAMNLAKESGSILSYDP 192 (248)
Q Consensus 171 ~~~~~~~~~~a~~~g~~v~~D~ 192 (248)
.+...+++++|+++|++|++|.
T Consensus 92 ~~dfk~Lv~~aH~~GI~VilD~ 113 (527)
T 1gcy_A 92 DAQLRQAASALGGAGVKVLYDV 113 (527)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEE
Confidence 4777899999999999999997
No 143
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=22.45 E-value=3e+02 Score=22.20 Aligned_cols=43 Identities=19% Similarity=0.213 Sum_probs=29.2
Q ss_pred hhcCccEEEEccccccc-------chhHHHHHHHHHHHHHCCCeEEEeCC
Q 025807 151 LIKQGSIFHYGSISLIA-------EPCRSTQLAAMNLAKESGSILSYDPN 193 (248)
Q Consensus 151 ~~~~~~~v~~~g~~~~~-------~~~~~~~~~~~~~a~~~g~~v~~D~~ 193 (248)
.-+++|++-+++-+..+ +...+.+..+++..++.++++++|..
T Consensus 62 v~~GAdIIDIGgeSTrPga~~v~~~eE~~Rv~pvI~~l~~~~vpiSIDT~ 111 (294)
T 2dqw_A 62 VAEGADILDLGAESTRPGAAPVPVEEEKRRLLPVLEAVLSLGVPVSVDTR 111 (294)
T ss_dssp HHHTCSEEEEECC-----------CCHHHHHHHHHHHHHTTCSCEEEECS
T ss_pred HHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhCCCeEEEECC
Confidence 45789999999854321 23335566777777777999999995
No 144
>2is8_A Molybdopterin biosynthesis enzyme, MOAB; globular alpha/beta fold, structu genomics, NPPSFA; 1.64A {Thermus thermophilus} PDB: 3mch_A
Probab=22.36 E-value=95 Score=22.48 Aligned_cols=35 Identities=11% Similarity=0.010 Sum_probs=26.1
Q ss_pred hHHHHHHHHHHcCCceeEEEeeCCCHHHHHHHHHHHH
Q 025807 63 APANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKE 99 (248)
Q Consensus 63 ~a~N~a~ala~lG~~v~l~~~vG~D~~g~~i~~~L~~ 99 (248)
++...+..|..+|.++...+.|++|. +.|.+.+++
T Consensus 22 n~~~l~~~l~~~G~~v~~~~iv~Dd~--~~i~~~l~~ 56 (164)
T 2is8_A 22 THLAIREVLAGGPFEVAAYELVPDEP--PMIKKVLRL 56 (164)
T ss_dssp HHHHHHHHHTTSSEEEEEEEEECSCH--HHHHHHHHH
T ss_pred hHHHHHHHHHHCCCeEeEEEEcCCCH--HHHHHHHHH
Confidence 45667788888899999999999995 334444444
No 145
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=22.28 E-value=1.1e+02 Score=23.33 Aligned_cols=47 Identities=17% Similarity=0.203 Sum_probs=32.7
Q ss_pred CCChHHHHHHHHHHcCCceeEEEeeCCCHHHHHHHHHHHHCCCCccceE
Q 025807 60 PGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVR 108 (248)
Q Consensus 60 ~GG~a~N~a~ala~lG~~v~l~~~vG~D~~g~~i~~~L~~~gI~~~~v~ 108 (248)
.||-|..+|..|++.|.++.+++. +....+.+.+.+++.+.++..+.
T Consensus 14 s~gIG~~~a~~l~~~G~~v~~~~r--~~~~~~~~~~~~~~~~~~~~~~~ 60 (247)
T 3lyl_A 14 SRGIGFEVAHALASKGATVVGTAT--SQASAEKFENSMKEKGFKARGLV 60 (247)
T ss_dssp SSHHHHHHHHHHHHTTCEEEEEES--SHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CChHHHHHHHHHHHCCCEEEEEeC--CHHHHHHHHHHHHhcCCceEEEE
Confidence 357778899999999998776654 22345667778888776655443
No 146
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus}
Probab=22.09 E-value=61 Score=27.90 Aligned_cols=23 Identities=13% Similarity=0.114 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHHCCCeEEEeCC
Q 025807 171 RSTQLAAMNLAKESGSILSYDPN 193 (248)
Q Consensus 171 ~~~~~~~~~~a~~~g~~v~~D~~ 193 (248)
.+...+++++|+++|++|++|.-
T Consensus 96 ~~df~~lv~~~h~~Gi~VilD~V 118 (475)
T 2z1k_A 96 NEALRHLLEVAHAHGVRVILDGV 118 (475)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEe
Confidence 46778999999999999999983
No 147
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=22.00 E-value=2.2e+02 Score=21.88 Aligned_cols=63 Identities=8% Similarity=-0.021 Sum_probs=38.7
Q ss_pred cchHhhhcCccEEEEcccccccchhHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCCHHHHHHHHHHhhhhCCEEEe
Q 025807 146 ELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKV 221 (248)
Q Consensus 146 ~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~w~~~~~~~~~~~~~l~~~dil~~ 221 (248)
++......++|++.+.......+ +.+.++++.+++.|+.+..++.. .++.... .-..+|++..
T Consensus 93 ~i~~~~~aGad~I~l~~~~~~~p---~~l~~~i~~~~~~g~~v~~~v~t-------~eea~~a---~~~Gad~Ig~ 155 (229)
T 3q58_A 93 DVDALAQAGADIIAFDASFRSRP---VDIDSLLTRIRLHGLLAMADCST-------VNEGISC---HQKGIEFIGT 155 (229)
T ss_dssp HHHHHHHHTCSEEEEECCSSCCS---SCHHHHHHHHHHTTCEEEEECSS-------HHHHHHH---HHTTCSEEEC
T ss_pred HHHHHHHcCCCEEEECccccCCh---HHHHHHHHHHHHCCCEEEEecCC-------HHHHHHH---HhCCCCEEEe
Confidence 34333456889988765422222 44567888888899999999863 2222222 2247888854
No 148
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=21.93 E-value=3.1e+02 Score=22.25 Aligned_cols=38 Identities=8% Similarity=-0.052 Sum_probs=23.8
Q ss_pred CccEEEEccccc-ccchhHHHHHHHHHHHHHCCCeEEEeCC
Q 025807 154 QGSIFHYGSISL-IAEPCRSTQLAAMNLAKESGSILSYDPN 193 (248)
Q Consensus 154 ~~~~v~~~g~~~-~~~~~~~~~~~~~~~a~~~g~~v~~D~~ 193 (248)
+.+++.++.... .+... .+.++.+.|+++|+.+++|-.
T Consensus 136 ~~~~v~~~~~~nptG~~~--~l~~i~~l~~~~~~~li~D~a 174 (416)
T 3isl_A 136 KPKIVAMVHGETSTGRIH--PLKAIGEACRTEDALFIVDAV 174 (416)
T ss_dssp CCSEEEEESEETTTTEEC--CCHHHHHHHHHTTCEEEEECT
T ss_pred CCcEEEEEccCCCCceec--CHHHHHHHHHHcCCEEEEECC
Confidence 567777765321 11111 045677888899999999964
No 149
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=21.83 E-value=86 Score=27.07 Aligned_cols=23 Identities=26% Similarity=0.222 Sum_probs=18.9
Q ss_pred CChHHHHHHHHHHcCCceeEEEe
Q 025807 61 GGAPANVAVGISRLGGSSAFVGK 83 (248)
Q Consensus 61 GG~a~N~a~ala~lG~~v~l~~~ 83 (248)
|-.|+.+|+.|++.|.+|.++..
T Consensus 10 G~AG~~AA~~la~~G~~V~liE~ 32 (443)
T 3g5s_A 10 GLAGSEAAWTLLRLGVPVRLFEM 32 (443)
T ss_dssp SHHHHHHHHHHHHTTCCEEEECC
T ss_pred hHHHHHHHHHHHHCCCcEEEEec
Confidence 34467889999999999999963
No 150
>2ckc_A Chromodomain-helicase-DNA-binding protein 7; protein-protein interaction, phosphorylation, disease mutation, nucleotide-binding; NMR {Homo sapiens} SCOP: d.76.2.1 PDB: 2v0e_A
Probab=21.65 E-value=55 Score=20.74 Aligned_cols=16 Identities=19% Similarity=0.575 Sum_probs=13.3
Q ss_pred HHHHHHHHhhcCccee
Q 025807 231 QKMLLHWYRYSSGFFM 246 (248)
Q Consensus 231 g~~~~~~~~~~~~~~~ 246 (248)
.+++.+||+.-++|.+
T Consensus 46 ~KdL~dWLrqhP~y~v 61 (80)
T 2ckc_A 46 NKDLVEWLKLHPTYTV 61 (80)
T ss_dssp HHHHHHHHHHCTTEEE
T ss_pred ccCHHHHHHHCCCcEE
Confidence 4688999999998875
No 151
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=21.51 E-value=62 Score=25.28 Aligned_cols=49 Identities=6% Similarity=0.017 Sum_probs=33.8
Q ss_pred ccEEEEcceeeeeccCCCCcccccCCCccccCCChHHHHHHHHHHcCCceeEEEee
Q 025807 29 RLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKL 84 (248)
Q Consensus 29 ~~ilviG~~~vD~~~~~~~~p~~~~~~~~~~~GG~a~N~a~ala~lG~~v~l~~~v 84 (248)
++|++.|.....-+=.+-. ....+.|+-|.-.|.++++.|.+|.+++.-
T Consensus 4 k~vlVTgG~T~E~IDpVR~-------ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~ 52 (232)
T 2gk4_A 4 MKILVTSGGTSEAIDSVRS-------ITNHSTGHLGKIITETLLSAGYEVCLITTK 52 (232)
T ss_dssp CEEEEECSBCEEESSSSEE-------EEECCCCHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CEEEEeCCCcccccCceee-------ccCCCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4577777754332222110 124678889999999999999999999863
No 152
>3fwy_A Light-independent protochlorophyllide reductase I ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2}
Probab=21.48 E-value=71 Score=26.00 Aligned_cols=21 Identities=24% Similarity=0.344 Sum_probs=18.5
Q ss_pred hHHHHHHHHHHcCCceeEEEe
Q 025807 63 APANVAVGISRLGGSSAFVGK 83 (248)
Q Consensus 63 ~a~N~a~ala~lG~~v~l~~~ 83 (248)
.+.|.|.+||++|.+|.++..
T Consensus 64 tavNLA~aLA~~GkkVllID~ 84 (314)
T 3fwy_A 64 TSSNLSAAFSILGKRVLQIGC 84 (314)
T ss_dssp HHHHHHHHHHHTTCCEEEEEE
T ss_pred HHHHHHHHHHHCCCeEEEEec
Confidence 368999999999999988875
No 153
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=21.42 E-value=1.4e+02 Score=22.99 Aligned_cols=46 Identities=11% Similarity=0.021 Sum_probs=32.6
Q ss_pred CCChHHHHHHHHHHcCCceeEEEeeCCCHHHHHHHHHHHHCCCCccce
Q 025807 60 PGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGV 107 (248)
Q Consensus 60 ~GG~a~N~a~ala~lG~~v~l~~~vG~D~~g~~i~~~L~~~gI~~~~v 107 (248)
.||-|..+|..|++-|.+|.+++. +....+.+.+.+++.|.++..+
T Consensus 20 s~gIG~aia~~l~~~G~~V~~~~r--~~~~~~~~~~~~~~~~~~~~~~ 65 (264)
T 3ucx_A 20 GPALGTTLARRCAEQGADLVLAAR--TVERLEDVAKQVTDTGRRALSV 65 (264)
T ss_dssp CTTHHHHHHHHHHHTTCEEEEEES--CHHHHHHHHHHHHHTTCCEEEE
T ss_pred CcHHHHHHHHHHHHCcCEEEEEeC--CHHHHHHHHHHHHhcCCcEEEE
Confidence 357788999999999999877654 2234566777777777665544
No 154
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=21.40 E-value=1e+02 Score=26.49 Aligned_cols=42 Identities=14% Similarity=0.164 Sum_probs=32.7
Q ss_pred hHHHHHHHHHHcCCceeEEEeeC------CCHHHHHHHHHHHHCCCCcc
Q 025807 63 APANVAVGISRLGGSSAFVGKLG------DDEFGYMLANILKENNVDTS 105 (248)
Q Consensus 63 ~a~N~a~ala~lG~~v~l~~~vG------~D~~g~~i~~~L~~~gI~~~ 105 (248)
.+.-+|..++++|.+|.++.. + +....+.+.+.|++.||++.
T Consensus 198 ~g~E~A~~l~~~g~~Vtlv~~-~~~l~~~d~~~~~~l~~~l~~~Gv~i~ 245 (483)
T 3dgh_A 198 IGLECAGFLKGLGYEPTVMVR-SIVLRGFDQQMAELVAASMEERGIPFL 245 (483)
T ss_dssp HHHHHHHHHHHTTCEEEEEES-SCSSTTSCHHHHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHHHcCCEEEEEeC-CCCCcccCHHHHHHHHHHHHhCCCEEE
Confidence 356678889999999999965 2 22367888999999999864
No 155
>1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A
Probab=21.31 E-value=59 Score=27.56 Aligned_cols=23 Identities=17% Similarity=0.062 Sum_probs=20.7
Q ss_pred hHHHHHHHHHHHHHCCCeEEEeC
Q 025807 170 CRSTQLAAMNLAKESGSILSYDP 192 (248)
Q Consensus 170 ~~~~~~~~~~~a~~~g~~v~~D~ 192 (248)
..+..++++++|+++|++|++|.
T Consensus 73 ~~~d~~~lv~~~h~~Gi~VilD~ 95 (422)
T 1ua7_A 73 TEQEFKEMCAAAEEYGIKVIVDA 95 (422)
T ss_dssp EHHHHHHHHHHHHTTTCEEEEEE
T ss_pred CHHHHHHHHHHHHHCCCEEEEEe
Confidence 35778899999999999999997
No 156
>1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A*
Probab=21.01 E-value=79 Score=26.88 Aligned_cols=25 Identities=16% Similarity=0.001 Sum_probs=21.0
Q ss_pred hHHHHHHHHHHHHHCCCeEEEeCCC
Q 025807 170 CRSTQLAAMNLAKESGSILSYDPNL 194 (248)
Q Consensus 170 ~~~~~~~~~~~a~~~g~~v~~D~~~ 194 (248)
..+.+..++++|++.|.+|.+|+..
T Consensus 87 d~~~~~~~a~~Ak~~GLkVlldfHy 111 (399)
T 1ur4_A 87 DLEKAIQIGKRATANGMKLLADFHY 111 (399)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECS
T ss_pred CHHHHHHHHHHHHHCCCEEEEEecc
Confidence 3466778999999999999999754
No 157
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=20.87 E-value=76 Score=26.22 Aligned_cols=42 Identities=19% Similarity=0.274 Sum_probs=32.8
Q ss_pred hHHHHHHHHHHcCCceeEEEeeCC----C-HHHHHHHHHHHHCCCCc
Q 025807 63 APANVAVGISRLGGSSAFVGKLGD----D-EFGYMLANILKENNVDT 104 (248)
Q Consensus 63 ~a~N~a~ala~lG~~v~l~~~vG~----D-~~g~~i~~~L~~~gI~~ 104 (248)
.|.-+|..|+++|.+|.++..-.. | ...+.+.+.|++.||++
T Consensus 154 ~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~l~~~l~~~gV~i 200 (367)
T 1xhc_A 154 IGLELAGNLAEAGYHVKLIHRGAMFLGLDEELSNMIKDMLEETGVKF 200 (367)
T ss_dssp HHHHHHHHHHHTTCEEEEECSSSCCTTCCHHHHHHHHHHHHHTTEEE
T ss_pred HHHHHHHHHHhCCCEEEEEeCCCeeccCCHHHHHHHHHHHHHCCCEE
Confidence 367888999999999998865321 2 36788899999999985
No 158
>3uk7_A Class I glutamine amidotransferase-like domain-CO protein; rossmann fold, cytosol; 2.05A {Arabidopsis thaliana}
Probab=20.83 E-value=2.2e+02 Score=23.65 Aligned_cols=98 Identities=6% Similarity=-0.112 Sum_probs=48.5
Q ss_pred HHHHHHHHHCCCCccceEEcCCCCceEE-EEEEecCCCceEEEecCCCcccccCcccchHhhhcCccEEEEcccccc-cc
Q 025807 91 YMLANILKENNVDTSGVRYDSTARTALA-FVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLI-AE 168 (248)
Q Consensus 91 ~~i~~~L~~~gI~~~~v~~~~~~~T~~~-~i~i~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~-~~ 168 (248)
-...+.|++.|.++..+... +.+.... ....+..+...+....+........ +........|++.+-|-... ..
T Consensus 222 ~~~~~~l~~ag~~v~~vs~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~---~~~~~~~~~D~livpGg~~~~~~ 297 (396)
T 3uk7_A 222 KVPFQSLQALGCQVDAVCPE-KKAGDRCPTAIHDFEGDQTYSEKPGHTFALTTN---FDDLVSSSYDALVIPGGRAPEYL 297 (396)
T ss_dssp HHHHHHHHHHTCEEEEECTT-CCTTCEECEEEEECCSSSSCEEEECCCEECCSC---GGGCCGGGCSEEEECCBSHHHHH
T ss_pred HHHHHHHHHCCCEEEEECCC-CCCCcccccccccccccchhhhcCCceeeccCC---HHHCCcccCCEEEECCCcchhhh
Confidence 45677888889887644322 2221111 1122323333332221111111111 22222456888888553211 11
Q ss_pred hhHHHHHHHHHHHHHCCCeEEEeC
Q 025807 169 PCRSTQLAAMNLAKESGSILSYDP 192 (248)
Q Consensus 169 ~~~~~~~~~~~~a~~~g~~v~~D~ 192 (248)
...+.+.++++++.++|.++..-+
T Consensus 298 ~~~~~~~~~l~~~~~~~~~i~aiC 321 (396)
T 3uk7_A 298 ALNEHVLNIVKEFMNSEKPVASIC 321 (396)
T ss_dssp TTCHHHHHHHHHHHHTTCCEEEEG
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEc
Confidence 223567789999999998887655
No 159
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1
Probab=20.81 E-value=62 Score=27.97 Aligned_cols=22 Identities=14% Similarity=0.068 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHHCCCeEEEeC
Q 025807 171 RSTQLAAMNLAKESGSILSYDP 192 (248)
Q Consensus 171 ~~~~~~~~~~a~~~g~~v~~D~ 192 (248)
.+..++++++|+++|++|++|.
T Consensus 97 ~~df~~lv~~~H~~Gi~VilD~ 118 (484)
T 2aaa_A 97 ADNLKSLSDALHARGMYLMVDV 118 (484)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEE
Confidence 4678899999999999999997
No 160
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=20.69 E-value=2.3e+02 Score=21.05 Aligned_cols=27 Identities=7% Similarity=0.196 Sum_probs=22.2
Q ss_pred eEEEeeCCCHHHHHHHHHHHHCCCCcc
Q 025807 79 AFVGKLGDDEFGYMLANILKENNVDTS 105 (248)
Q Consensus 79 ~l~~~vG~D~~g~~i~~~L~~~gI~~~ 105 (248)
.-++.+|....|..+...|.+.|.++.
T Consensus 20 ~~I~iiG~G~mG~~la~~l~~~g~~V~ 46 (209)
T 2raf_A 20 MEITIFGKGNMGQAIGHNFEIAGHEVT 46 (209)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEE
Confidence 347888999999999999999887654
No 161
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=20.41 E-value=2.9e+02 Score=22.56 Aligned_cols=40 Identities=10% Similarity=0.116 Sum_probs=23.5
Q ss_pred CccEEEEccccc-ccchhHHHHHHHHHHHHHCCCeEEEeCCCC
Q 025807 154 QGSIFHYGSISL-IAEPCRSTQLAAMNLAKESGSILSYDPNLR 195 (248)
Q Consensus 154 ~~~~v~~~g~~~-~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~ 195 (248)
+.+++++..... ..... .+.++.+.|+++|+.+++|-...
T Consensus 149 ~~~~v~~~~~~nptG~~~--~l~~i~~l~~~~~~~li~De~~~ 189 (398)
T 2rfv_A 149 ETKVVYIETPANPTLSLV--DIETVAGIAHQQGALLVVDNTFM 189 (398)
T ss_dssp TEEEEEEESSBTTTTBCC--CHHHHHHHHHHTTCEEEEECTTT
T ss_pred CCeEEEEECCCCCCCccc--CHHHHHHHHHHcCCEEEEECCCc
Confidence 456776654321 11111 15577777888888888887543
No 162
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus}
Probab=20.26 E-value=67 Score=29.02 Aligned_cols=23 Identities=9% Similarity=-0.064 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHHHCCCeEEEeCC
Q 025807 171 RSTQLAAMNLAKESGSILSYDPN 193 (248)
Q Consensus 171 ~~~~~~~~~~a~~~g~~v~~D~~ 193 (248)
.+...+++++|+++|++|++|.-
T Consensus 285 ~~df~~LV~~aH~~GI~VIlD~V 307 (645)
T 4aef_A 285 DRAFVDLLSELKRFDIKVILDGV 307 (645)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHhhhcCCEEEEEec
Confidence 47788999999999999999983
No 163
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=20.09 E-value=1.3e+02 Score=23.62 Aligned_cols=46 Identities=13% Similarity=0.055 Sum_probs=33.4
Q ss_pred CChHHHHHHHHHHcCCceeEEEeeCCCHHHHHHHHHHHHCCCCccceE
Q 025807 61 GGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGVR 108 (248)
Q Consensus 61 GG~a~N~a~ala~lG~~v~l~~~vG~D~~g~~i~~~L~~~gI~~~~v~ 108 (248)
+|-|.-+|..|++-|.+|.++.. +....+.+.+++++.|.++..+.
T Consensus 17 ~GIG~aiA~~la~~Ga~Vv~~~~--~~~~~~~~~~~i~~~g~~~~~~~ 62 (254)
T 4fn4_A 17 SGIGRAIAKKFALNDSIVVAVEL--LEDRLNQIVQELRGMGKEVLGVK 62 (254)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEES--CHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CHHHHHHHHHHHHcCCEEEEEEC--CHHHHHHHHHHHHhcCCcEEEEE
Confidence 35666788888888999877654 23356778889998888766554
No 164
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=20.02 E-value=2.7e+02 Score=21.95 Aligned_cols=49 Identities=4% Similarity=-0.133 Sum_probs=28.4
Q ss_pred ccccCCChHHHHHHHHHHcCCceeEEEeeCCCHHHHHHHHHHHHCCCCccce
Q 025807 56 FKKAPGGAPANVAVGISRLGGSSAFVGKLGDDEFGYMLANILKENNVDTSGV 107 (248)
Q Consensus 56 ~~~~~GG~a~N~a~ala~lG~~v~l~~~vG~D~~g~~i~~~L~~~gI~~~~v 107 (248)
.....||+.++.+...+.+. + ..+ .+-.+.++......++..|+++..+
T Consensus 64 v~~~~g~t~al~~~~~~l~~-~-~~i-~~~~~~~~~~~~~~~~~~g~~~~~v 112 (362)
T 3ffr_A 64 VLFLASATEIWERIIQNCVE-K-KSF-HCVNGSFSKRFYEFAGELGREAYKE 112 (362)
T ss_dssp EEEESCHHHHHHHHHHHHCS-S-EEE-EEECSHHHHHHHHHHHHTTCEEEEE
T ss_pred EEEeCCchHHHHHHHHhccC-C-cEE-EEcCcHHHHHHHHHHHHhCCCeEEE
Confidence 44567777777666555553 3 222 2334556755566777778776544
Done!