Query 025814
Match_columns 247
No_of_seqs 288 out of 2036
Neff 8.7
Searched_HMMs 13730
Date Mon Mar 25 18:10:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025814.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/025814hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1b7fa1 d.58.7.1 (A:123-204) S 99.9 4.7E-24 3.4E-28 147.2 10.3 80 138-217 2-81 (82)
2 d1x5ua1 d.58.7.1 (A:7-99) Spli 99.9 4.5E-24 3.3E-28 150.8 9.7 85 136-220 7-91 (93)
3 d1rk8a_ d.58.7.1 (A:) RNA-bind 99.9 1.4E-23 9.9E-28 146.8 11.9 84 135-218 4-87 (88)
4 d2cpza1 d.58.7.1 (A:383-484) C 99.9 1.6E-23 1.2E-27 150.4 12.2 85 136-220 16-100 (102)
5 d2cq0a1 d.58.7.1 (A:231-320) E 99.9 1.6E-23 1.1E-27 147.1 11.6 84 136-219 6-89 (90)
6 d2cqba1 d.58.7.1 (A:1-89) Pept 99.9 7.7E-24 5.6E-28 148.4 9.4 83 137-219 4-86 (89)
7 d1fxla1 d.58.7.1 (A:37-118) Hu 99.9 2.5E-23 1.8E-27 143.5 11.8 79 139-217 3-81 (82)
8 d1h2vz_ d.58.7.1 (Z:) CBP20, 2 99.9 4E-23 2.9E-27 145.9 12.5 84 135-218 4-87 (93)
9 d2u2fa_ d.58.7.1 (A:) Splicing 99.9 8.7E-24 6.3E-28 146.9 8.4 81 140-220 3-83 (85)
10 d1cvja1 d.58.7.1 (A:11-90) Pol 99.9 2.3E-23 1.7E-27 143.1 10.4 77 140-216 2-78 (80)
11 d1whwa_ d.58.7.1 (A:) Probable 99.9 4.7E-23 3.4E-27 147.2 11.0 85 135-219 5-89 (99)
12 d1u6fa1 d.58.7.1 (A:1-139) RNA 99.9 1.1E-22 8.1E-27 154.1 12.5 85 136-220 40-124 (139)
13 d1l3ka1 d.58.7.1 (A:8-91) Nucl 99.9 9.7E-23 7E-27 141.2 11.1 80 136-216 4-83 (84)
14 d2cqca1 d.58.7.1 (A:109-191) A 99.9 8.7E-23 6.3E-27 141.1 10.9 78 135-212 6-83 (83)
15 d2cqga1 d.58.7.1 (A:96-185) TA 99.9 1.5E-22 1.1E-26 141.9 12.2 83 136-220 6-88 (90)
16 d2ghpa1 d.58.7.1 (A:116-196) U 99.9 4.6E-23 3.3E-27 141.9 8.8 80 138-217 1-80 (81)
17 d1fxla2 d.58.7.1 (A:119-203) H 99.9 1.1E-22 8.2E-27 141.2 10.3 78 138-215 6-85 (85)
18 d1x4ba1 d.58.7.1 (A:8-110) Het 99.9 1E-22 7.3E-27 146.4 10.4 82 138-220 20-101 (103)
19 d1uawa_ d.58.7.1 (A:) Musashi- 99.9 2E-23 1.5E-27 142.2 6.4 76 139-215 1-76 (77)
20 d1b7fa2 d.58.7.1 (A:205-289) S 99.9 1.8E-22 1.3E-26 140.1 10.8 79 137-215 5-85 (85)
21 d1x5sa1 d.58.7.1 (A:8-97) Cold 99.9 7.2E-23 5.3E-27 143.7 8.6 84 137-220 4-87 (90)
22 d2cpha1 d.58.7.1 (A:454-547) P 99.9 1.4E-22 1E-26 143.3 9.9 84 137-220 7-92 (94)
23 d1p1ta_ d.58.7.1 (A:) Cleavage 99.9 9.3E-23 6.8E-27 146.9 9.0 81 139-219 9-89 (104)
24 d2cq4a1 d.58.7.1 (A:132-232) R 99.9 1.1E-22 7.7E-27 145.8 8.7 79 138-217 18-96 (101)
25 d2cpfa1 d.58.7.1 (A:362-446) P 99.9 2.3E-22 1.7E-26 139.5 10.1 79 141-219 1-82 (85)
26 d1x5ta1 d.58.7.1 (A:8-90) Spli 99.9 1.2E-22 8.9E-27 140.3 8.6 79 141-219 1-80 (83)
27 d2cqda1 d.58.7.1 (A:1-103) RNA 99.9 2.3E-22 1.7E-26 144.5 10.4 83 136-219 8-90 (103)
28 d2cq3a1 d.58.7.1 (A:110-202) R 99.9 9.8E-22 7.1E-26 138.7 13.2 84 135-220 8-91 (93)
29 d1no8a_ d.58.7.1 (A:) Nuclear 99.9 2.4E-22 1.8E-26 137.2 9.6 76 140-216 2-77 (78)
30 d1hd0a_ d.58.7.1 (A:) Heteroge 99.9 1.2E-22 8.9E-27 137.6 7.7 75 140-215 1-75 (75)
31 d2cqia1 d.58.7.1 (A:1-90) Nucl 99.9 7.4E-22 5.4E-26 138.4 11.6 83 135-219 5-87 (90)
32 d1l3ka2 d.58.7.1 (A:103-181) N 99.9 7.5E-22 5.5E-26 135.0 11.2 76 139-215 3-78 (79)
33 d1u1qa_ d.58.7.1 (A:) Nuclear 99.9 1E-21 7.6E-26 154.9 12.1 145 67-219 31-177 (183)
34 d1cvja2 d.58.7.1 (A:91-179) Po 99.9 5.2E-22 3.8E-26 138.9 8.9 79 139-219 9-87 (89)
35 d1x4ha1 d.58.7.1 (A:8-105) RNA 99.9 1.1E-21 8E-26 139.6 10.6 86 135-220 5-96 (98)
36 d1x0fa1 d.58.7.1 (A:183-257) N 99.9 1.7E-22 1.2E-26 136.9 5.7 75 140-215 1-75 (75)
37 d2ghpa3 d.58.7.1 (A:206-291) U 99.9 7.2E-22 5.3E-26 137.3 8.2 80 138-218 4-85 (86)
38 d2cpea1 d.58.7.1 (A:353-453) R 99.8 2.2E-21 1.6E-25 138.8 10.5 85 135-219 5-97 (101)
39 d2f9da1 d.58.7.1 (A:12-125) Pr 99.8 1.9E-21 1.4E-25 142.3 9.8 79 136-217 5-83 (114)
40 d2msta_ d.58.7.1 (A:) Neural R 99.8 1E-21 7.5E-26 132.9 7.3 75 140-215 1-75 (75)
41 d1fjeb1 d.58.7.1 (B:1-91) Nucl 99.8 6.4E-22 4.7E-26 139.0 4.1 82 135-218 10-91 (91)
42 d2cpxa1 d.58.7.1 (A:291-392) R 99.8 6.7E-22 4.9E-26 141.8 4.2 85 136-220 16-100 (102)
43 d1x4aa1 d.58.7.1 (A:9-103) Spl 99.8 1.7E-20 1.2E-24 132.8 10.9 81 135-218 11-91 (95)
44 d1x4ga1 d.58.7.1 (A:8-103) Nuc 99.8 1.1E-20 8.4E-25 133.8 9.4 77 136-218 16-92 (96)
45 d1x5oa1 d.58.7.1 (A:8-108) RNA 99.8 1.1E-20 8.2E-25 135.1 9.3 81 136-217 16-96 (101)
46 d1zh5a2 d.58.7.1 (A:105-189) L 99.8 3E-20 2.2E-24 128.7 11.1 76 139-216 7-82 (85)
47 d1x4ea1 d.58.7.1 (A:8-79) RNA- 99.8 3.9E-21 2.9E-25 129.0 5.6 71 141-211 1-71 (72)
48 d1fjca_ d.58.7.1 (A:) Nucleoli 99.8 1.9E-20 1.4E-24 132.7 9.5 82 134-220 12-93 (96)
49 d2cpia1 d.58.7.1 (A:101-189) E 99.8 1.4E-20 1E-24 131.5 8.5 76 138-213 8-89 (89)
50 d2disa1 d.58.7.1 (A:8-103) Hyp 99.8 1.4E-20 1E-24 133.4 7.4 83 139-221 2-88 (96)
51 d1wi8a_ d.58.7.1 (A:) Eukaryot 99.8 4.4E-20 3.2E-24 132.7 10.0 81 137-219 14-95 (104)
52 d2cqpa1 d.58.7.1 (A:917-1002) 99.8 3.4E-20 2.5E-24 128.6 9.1 80 136-215 7-86 (86)
53 d2cpda1 d.58.7.1 (A:223-308) A 99.8 1E-19 7.6E-24 126.2 11.4 78 138-221 8-85 (86)
54 d2cpja1 d.58.7.1 (A:65-150) No 99.8 5.3E-20 3.9E-24 127.7 9.6 77 137-219 7-83 (86)
55 d2b0ga1 d.58.7.1 (A:1-83) Spli 99.8 8.5E-20 6.2E-24 125.8 9.6 77 135-216 5-82 (83)
56 d2cqha1 d.58.7.1 (A:2-81) IGF- 99.8 2.5E-20 1.8E-24 127.6 6.8 75 140-220 3-78 (80)
57 d1wf2a_ d.58.7.1 (A:) Heteroge 99.8 1.3E-19 9.6E-24 128.7 10.7 75 136-218 13-88 (98)
58 d2bz2a1 d.58.7.1 (A:35-113) Ne 99.8 6.4E-20 4.6E-24 125.3 8.5 76 135-218 2-77 (79)
59 d2ghpa2 d.58.7.1 (A:41-115) U4 99.8 1.5E-19 1.1E-23 122.1 9.8 73 140-215 2-74 (75)
60 d1whxa_ d.58.7.1 (A:) Probable 99.8 5.3E-20 3.9E-24 133.7 8.0 77 137-219 9-85 (111)
61 d1nu4a_ d.58.7.1 (A:) Spliceso 99.8 5.6E-20 4.1E-24 128.9 7.8 79 138-219 3-85 (91)
62 d2cpya1 d.58.7.1 (A:536-638) R 99.8 5.8E-20 4.2E-24 131.8 7.3 82 135-217 5-86 (103)
63 d2adca2 d.58.7.1 (A:444-531) P 99.8 2.3E-19 1.7E-23 125.0 9.8 78 136-217 8-86 (88)
64 d1wg5a_ d.58.7.1 (A:) Heteroge 99.8 3.1E-19 2.3E-23 128.2 10.7 83 136-219 13-95 (104)
65 d1weza_ d.58.7.1 (A:) Heteroge 99.8 2.2E-19 1.6E-23 128.5 9.5 82 135-219 12-93 (102)
66 d2adca1 d.58.7.1 (A:335-443) P 99.8 1.4E-19 1E-23 131.1 7.7 76 139-219 3-79 (109)
67 d1wela1 d.58.7.1 (A:412-523) R 99.8 2E-19 1.5E-23 130.9 8.1 84 135-219 15-98 (112)
68 d1wg1a_ d.58.7.1 (A:) Probable 99.8 5.8E-19 4.2E-23 122.9 9.7 75 138-219 5-79 (88)
69 d1wf0a_ d.58.7.1 (A:) TAR DNA- 99.8 1.9E-19 1.4E-23 125.4 7.2 77 137-220 4-80 (88)
70 d3begb1 d.58.7.1 (B:121-207) S 99.8 5.8E-20 4.2E-24 127.8 4.2 73 140-219 2-74 (87)
71 d1wi6a1 d.58.7.1 (A:69-143) Ri 99.8 1.1E-18 8.1E-23 117.7 9.5 71 141-218 1-71 (75)
72 d2adba1 d.58.7.1 (A:177-284) P 99.8 4.3E-19 3.1E-23 128.3 7.9 79 137-219 6-86 (108)
73 d2cq1a1 d.58.7.1 (A:51-138) Po 99.8 2.8E-18 2.1E-22 119.3 10.8 79 135-219 5-85 (88)
74 d1whya_ d.58.7.1 (A:) Putative 99.8 1.5E-18 1.1E-22 123.0 9.2 78 136-219 15-94 (97)
75 d1wg4a_ d.58.7.1 (A:) Splicing 99.8 1.7E-18 1.2E-22 122.9 9.5 76 136-218 13-88 (98)
76 d1x4fa1 d.58.7.1 (A:8-106) Mat 99.7 4.3E-18 3.1E-22 121.0 9.2 79 135-219 15-96 (99)
77 d1wexa_ d.58.7.1 (A:) Heteroge 99.7 1.9E-17 1.4E-21 118.7 10.9 79 135-219 12-92 (104)
78 d1x4da1 d.58.7.1 (A:8-96) Matr 99.7 2.4E-17 1.7E-21 114.8 9.2 78 135-218 5-85 (89)
79 d1u2fa_ d.58.7.1 (A:) Splicing 99.7 8.2E-20 6E-24 127.8 -4.0 76 139-215 2-82 (90)
80 d1weya_ d.58.7.1 (A:) Calcipre 99.7 1.1E-17 8.2E-22 119.8 6.3 78 137-220 4-86 (104)
81 d1jmta_ d.58.7.3 (A:) d1b7fa1 d.58.7.1 (A:123-204) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.90 E-value=4.7e-24 Score=147.21 Aligned_cols=80 Identities=28% Similarity=0.463 Sum_probs=77.2
Q ss_pred CcEEEEcCCCCCCcHHHHHHHhccCCCeeEEEEEecCCCCCcceEEEEEecCHHHHHHHHHHhCCceeCCEeEEEEEccc
Q 025814 138 DYRLFCGDLGNEVNDDVLSKAFSRFPSFNMAKVVRDKRTGKTKGYGFISFANPSDIAAALKEMNGKYVGNRPIKLRKSKW 217 (247)
Q Consensus 138 ~~~lfV~nLp~~~~e~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~~FV~f~~~~~a~~Al~~l~g~~i~g~~l~V~~a~~ 217 (247)
+++|||+|||.++++++|+++|++||.|.++++++++.+|.++|||||+|.+.++|++||+.|||..++|+.|+|++|++
T Consensus 2 ~t~l~V~nLp~~~t~~~l~~~F~~~G~v~~~~i~~~~~~g~~~g~afV~f~~~~~A~~ai~~lng~~~~g~~l~v~~a~p 81 (82)
T d1b7fa1 2 NTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSYGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSYARP 81 (82)
T ss_dssp CSEEEEECCCTTCCHHHHHHHHHTTSCEEEEECCEETTTTEECSEEEEEESSHHHHHHHHHHHTTCEETTEECEEEECCC
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHHhCCcceeeeeeecccCCccccceEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCC
Confidence 45899999999999999999999999999999999999999999999999999999999999999999999999999875
No 2
>d1x5ua1 d.58.7.1 (A:7-99) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.90 E-value=4.5e-24 Score=150.82 Aligned_cols=85 Identities=25% Similarity=0.466 Sum_probs=80.8
Q ss_pred CCCcEEEEcCCCCCCcHHHHHHHhccCCCeeEEEEEecCCCCCcceEEEEEecCHHHHHHHHHHhCCceeCCEeEEEEEc
Q 025814 136 ENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMAKVVRDKRTGKTKGYGFISFANPSDIAAALKEMNGKYVGNRPIKLRKS 215 (247)
Q Consensus 136 ~~~~~lfV~nLp~~~~e~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~~FV~f~~~~~a~~Al~~l~g~~i~g~~l~V~~a 215 (247)
...++|||+|||.++++++|+++|++||.|.+|+|++|+.+|.++|||||+|.+.++|++|++.|||..|+|+.|+|++|
T Consensus 7 ~~~~tlfV~nLp~~~t~~~l~~~F~~~G~v~~v~~~~d~~tg~~kg~afV~f~~~~~A~~Ai~~l~g~~~~g~~l~V~~A 86 (93)
T d1x5ua1 7 NQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMDMIKLYGKPIRVNKA 86 (93)
T ss_dssp CTTTEEEEECCCTTCCHHHHHHHHHTTSCEEEEECCBCSSSCSBCSCEEEEESSHHHHHHHHHHSSSCBCSSCBCEEEET
T ss_pred CCCCEEEEeCCCCcCCHHHHHHHHHHhCCccccceeecccccccccceEEEECCHHHHHHHHHHcCCCEECCEEEEEEEc
Confidence 34569999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccc
Q 025814 216 KWQER 220 (247)
Q Consensus 216 ~~k~~ 220 (247)
+++.+
T Consensus 87 ~~~~~ 91 (93)
T d1x5ua1 87 SAHNK 91 (93)
T ss_dssp TTTSC
T ss_pred CCCCC
Confidence 88764
No 3
>d1rk8a_ d.58.7.1 (A:) RNA-binding protein 8 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.90 E-value=1.4e-23 Score=146.83 Aligned_cols=84 Identities=20% Similarity=0.382 Sum_probs=79.2
Q ss_pred CCCCcEEEEcCCCCCCcHHHHHHHhccCCCeeEEEEEecCCCCCcceEEEEEecCHHHHHHHHHHhCCceeCCEeEEEEE
Q 025814 135 PENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMAKVVRDKRTGKTKGYGFISFANPSDIAAALKEMNGKYVGNRPIKLRK 214 (247)
Q Consensus 135 ~~~~~~lfV~nLp~~~~e~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~~FV~f~~~~~a~~Al~~l~g~~i~g~~l~V~~ 214 (247)
..++++|||+|||.++++++|+++|+.||.|.+|++++|+.+|.++|||||+|.+.++|++|+..|||..|+|+.|+|++
T Consensus 4 s~~~~~l~V~nL~~~~t~~~l~~~F~~~G~i~~v~i~~d~~tg~~~g~afV~f~~~~~A~~A~~~lng~~l~g~~l~V~~ 83 (88)
T d1rk8a_ 4 SVEGWILFVTSIHEEAQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEALNGAEIMGQTIQVDW 83 (88)
T ss_dssp CC-CEEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTSSEEEEEEEEESSHHHHHHHHHHHTTCEETTEECEEEE
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHHHHcCCcccccccccccccccccceeEEECCHHHHHHHHHHcCCCEECCEEEEEEE
Confidence 34567999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccc
Q 025814 215 SKWQ 218 (247)
Q Consensus 215 a~~k 218 (247)
+..+
T Consensus 84 a~~k 87 (88)
T d1rk8a_ 84 CFVK 87 (88)
T ss_dssp SEEC
T ss_pred ecCC
Confidence 9765
No 4
>d2cpza1 d.58.7.1 (A:383-484) CUG triplet repeat RNA-binding protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.90 E-value=1.6e-23 Score=150.44 Aligned_cols=85 Identities=32% Similarity=0.473 Sum_probs=80.9
Q ss_pred CCCcEEEEcCCCCCCcHHHHHHHhccCCCeeEEEEEecCCCCCcceEEEEEecCHHHHHHHHHHhCCceeCCEeEEEEEc
Q 025814 136 ENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMAKVVRDKRTGKTKGYGFISFANPSDIAAALKEMNGKYVGNRPIKLRKS 215 (247)
Q Consensus 136 ~~~~~lfV~nLp~~~~e~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~~FV~f~~~~~a~~Al~~l~g~~i~g~~l~V~~a 215 (247)
+++++|||+|||+++++++|+++|+.||.|.++.++.++.+|.++|||||+|.+.++|+.||+.|||..|+|+.|+|+++
T Consensus 16 p~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~g~~kG~afV~f~~~~~A~~Ai~~lng~~~~g~~i~V~~a 95 (102)
T d2cpza1 16 PEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLK 95 (102)
T ss_dssp STTCCEEEESCCSSCCHHHHHHHHGGGSCCSEEEEEECSSSCSEEEEEEEECSSHHHHHHHHHHHTTCEETTEECEEECC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhhccccccceeeecccCCCccceEEEeCCHHHHHHHHHHhCCCEECCEEEEEEEe
Confidence 45568999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccc
Q 025814 216 KWQER 220 (247)
Q Consensus 216 ~~k~~ 220 (247)
+++..
T Consensus 96 ~~k~~ 100 (102)
T d2cpza1 96 RSKND 100 (102)
T ss_dssp CCSCC
T ss_pred CCCCC
Confidence 88764
No 5
>d2cq0a1 d.58.7.1 (A:231-320) Eukaryotic translation initiation factor 3 subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.90 E-value=1.6e-23 Score=147.12 Aligned_cols=84 Identities=24% Similarity=0.382 Sum_probs=79.9
Q ss_pred CCCcEEEEcCCCCCCcHHHHHHHhccCCCeeEEEEEecCCCCCcceEEEEEecCHHHHHHHHHHhCCceeCCEeEEEEEc
Q 025814 136 ENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMAKVVRDKRTGKTKGYGFISFANPSDIAAALKEMNGKYVGNRPIKLRKS 215 (247)
Q Consensus 136 ~~~~~lfV~nLp~~~~e~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~~FV~f~~~~~a~~Al~~l~g~~i~g~~l~V~~a 215 (247)
.+.++|||+|||.++++++|+++|+.||.|.+|+|+.|+.+|.++|||||+|.+.++|.+|++.|||..|+|+.|+|+++
T Consensus 6 ~~~~~i~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~d~~t~~~rg~afV~f~~~~~A~~Ai~~l~g~~~~g~~i~v~~a 85 (90)
T d2cq0a1 6 DDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGVSGFGYDHLILNVEWA 85 (90)
T ss_dssp SSSEEEEEESCCTTCCHHHHHTTSTTTCCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHHTTTCEETTEECEEEES
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHHHhcccccccccccccccccccceeEEECCHHHHHHHHHHhCCCEECCEEEEEEee
Confidence 44568999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccc
Q 025814 216 KWQE 219 (247)
Q Consensus 216 ~~k~ 219 (247)
+++.
T Consensus 86 kp~~ 89 (90)
T d2cq0a1 86 KPST 89 (90)
T ss_dssp SCCC
T ss_pred eCCC
Confidence 8764
No 6
>d2cqba1 d.58.7.1 (A:1-89) Peptidyl-prolyl cis-trans isomerase E, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.90 E-value=7.7e-24 Score=148.43 Aligned_cols=83 Identities=31% Similarity=0.463 Sum_probs=78.9
Q ss_pred CCcEEEEcCCCCCCcHHHHHHHhccCCCeeEEEEEecCCCCCcceEEEEEecCHHHHHHHHHHhCCceeCCEeEEEEEcc
Q 025814 137 NDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMAKVVRDKRTGKTKGYGFISFANPSDIAAALKEMNGKYVGNRPIKLRKSK 216 (247)
Q Consensus 137 ~~~~lfV~nLp~~~~e~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~~FV~f~~~~~a~~Al~~l~g~~i~g~~l~V~~a~ 216 (247)
..++|||+|||+++++++|+++|+.||.|.+|.|++|+.+|.++|||||+|.+.++|++|+..|||..|+|+.|+|++++
T Consensus 4 ~~~tlfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~~~~~kg~afV~f~~~~~A~~ai~~l~~~~i~g~~l~v~~a~ 83 (89)
T d2cqba1 4 TKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNMNESELFGRTIRVNLAK 83 (89)
T ss_dssp CCSCEEEESCCSSCCHHHHHHHHTTTSCCCCEECCCCSSSCCCSSEEEECCSSHHHHHHHHHHHTTEEETTEEEEEEECC
T ss_pred CCcEEEEeCCCCcCCHHHHHHHHhhCCeEEecccccccccccccceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEEeC
Confidence 34589999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ccc
Q 025814 217 WQE 219 (247)
Q Consensus 217 ~k~ 219 (247)
++.
T Consensus 84 p~~ 86 (89)
T d2cqba1 84 PMR 86 (89)
T ss_dssp CCC
T ss_pred CCC
Confidence 653
No 7
>d1fxla1 d.58.7.1 (A:37-118) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.90 E-value=2.5e-23 Score=143.49 Aligned_cols=79 Identities=27% Similarity=0.509 Sum_probs=76.6
Q ss_pred cEEEEcCCCCCCcHHHHHHHhccCCCeeEEEEEecCCCCCcceEEEEEecCHHHHHHHHHHhCCceeCCEeEEEEEccc
Q 025814 139 YRLFCGDLGNEVNDDVLSKAFSRFPSFNMAKVVRDKRTGKTKGYGFISFANPSDIAAALKEMNGKYVGNRPIKLRKSKW 217 (247)
Q Consensus 139 ~~lfV~nLp~~~~e~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~~FV~f~~~~~a~~Al~~l~g~~i~g~~l~V~~a~~ 217 (247)
++|||+|||.++++++|+++|++||.|.++++++|..+|.++|||||+|.+.++|++|++.|||..|+|+.|+|++|++
T Consensus 3 t~l~V~nLp~~~te~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~g~~l~v~~AkP 81 (82)
T d1fxla1 3 TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARP 81 (82)
T ss_dssp SEEEEESCCTTCCHHHHHHHHHTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCEETTEECEEEECCC
T ss_pred CEEEEECCCCCCCHHHHHHHHHHhCCcccccceeeccCCCceeeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEeeC
Confidence 4799999999999999999999999999999999999999999999999999999999999999999999999999875
No 8
>d1h2vz_ d.58.7.1 (Z:) CBP20, 20KDa nuclear cap-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.89 E-value=4e-23 Score=145.87 Aligned_cols=84 Identities=18% Similarity=0.285 Sum_probs=79.5
Q ss_pred CCCCcEEEEcCCCCCCcHHHHHHHhccCCCeeEEEEEecCCCCCcceEEEEEecCHHHHHHHHHHhCCceeCCEeEEEEE
Q 025814 135 PENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMAKVVRDKRTGKTKGYGFISFANPSDIAAALKEMNGKYVGNRPIKLRK 214 (247)
Q Consensus 135 ~~~~~~lfV~nLp~~~~e~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~~FV~f~~~~~a~~Al~~l~g~~i~g~~l~V~~ 214 (247)
....++|||+|||+++++++|+++|+.||.|.+|.+++++.+|.++|||||+|.+.++|..|++.|||..|+|+.|+|++
T Consensus 4 ~~~s~tlfV~nlp~~~te~~l~~~F~~~G~i~~v~i~~~~~~~~~kg~afV~f~~~~~A~~Ai~~l~g~~~~gr~i~V~~ 83 (93)
T d1h2vz_ 4 LKKSCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRYINGTRLDDRIIRTDW 83 (93)
T ss_dssp TTTCCEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHTTTSEETTEECEEEE
T ss_pred cCCCCEEEEeCCCCCCCHHHHHHHHHHHCCcceeccccccccccccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEE
Confidence 34566999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccc
Q 025814 215 SKWQ 218 (247)
Q Consensus 215 a~~k 218 (247)
+...
T Consensus 84 a~~~ 87 (93)
T d1h2vz_ 84 DAGF 87 (93)
T ss_dssp ESCC
T ss_pred cCCC
Confidence 8754
No 9
>d2u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.89 E-value=8.7e-24 Score=146.88 Aligned_cols=81 Identities=26% Similarity=0.528 Sum_probs=78.2
Q ss_pred EEEEcCCCCCCcHHHHHHHhccCCCeeEEEEEecCCCCCcceEEEEEecCHHHHHHHHHHhCCceeCCEeEEEEEccccc
Q 025814 140 RLFCGDLGNEVNDDVLSKAFSRFPSFNMAKVVRDKRTGKTKGYGFISFANPSDIAAALKEMNGKYVGNRPIKLRKSKWQE 219 (247)
Q Consensus 140 ~lfV~nLp~~~~e~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~~FV~f~~~~~a~~Al~~l~g~~i~g~~l~V~~a~~k~ 219 (247)
+|||+|||+++++++|+++|++||.|.+++|++|+.||.++|||||+|.+.++|..|++.|||..|+|+.|+|+++.+..
T Consensus 3 rlfV~nlp~~~te~~l~~~F~~~G~v~~v~i~~d~~tg~~rg~aFV~f~~~~~A~~a~~~l~~~~l~g~~l~V~~A~~~~ 82 (85)
T d2u2fa_ 3 KLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGA 82 (85)
T ss_dssp CEEEETCCSSCCSHHHHHHHTSSSCEEEEEEECCCSSSCCCCEEEEEESSSHHHHHHHHTSSSCCCSSSCCEEEECCCCC
T ss_pred EEEEECCCCCCCHHHHHHHHHhcCccceEEeeccccccccceeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCCCC
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999998765
Q ss_pred c
Q 025814 220 R 220 (247)
Q Consensus 220 ~ 220 (247)
+
T Consensus 83 ~ 83 (85)
T d2u2fa_ 83 K 83 (85)
T ss_dssp C
T ss_pred C
Confidence 4
No 10
>d1cvja1 d.58.7.1 (A:11-90) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.89 E-value=2.3e-23 Score=143.09 Aligned_cols=77 Identities=30% Similarity=0.536 Sum_probs=75.3
Q ss_pred EEEEcCCCCCCcHHHHHHHhccCCCeeEEEEEecCCCCCcceEEEEEecCHHHHHHHHHHhCCceeCCEeEEEEEcc
Q 025814 140 RLFCGDLGNEVNDDVLSKAFSRFPSFNMAKVVRDKRTGKTKGYGFISFANPSDIAAALKEMNGKYVGNRPIKLRKSK 216 (247)
Q Consensus 140 ~lfV~nLp~~~~e~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~~FV~f~~~~~a~~Al~~l~g~~i~g~~l~V~~a~ 216 (247)
+|||+|||+++++++|+++|+.||.|.+|+|++|+.+|.++|||||+|.+.++|..|++.|||..++|+.|+|.+++
T Consensus 2 slfV~nL~~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~~g~aFV~f~~~~~a~~ai~~l~g~~~~gr~i~v~~a~ 78 (80)
T d1cvja1 2 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQ 78 (80)
T ss_dssp EEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHTTSTTCEETTEECEEEECC
T ss_pred EEEEeCCCCcCCHHHHHHHHHHhCCEeEEEEEecccccCCCCceEEEECCHHHHHHHHHHcCCCEECCEEEEEEEeC
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999985
No 11
>d1whwa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.89 E-value=4.7e-23 Score=147.23 Aligned_cols=85 Identities=25% Similarity=0.400 Sum_probs=80.1
Q ss_pred CCCCcEEEEcCCCCCCcHHHHHHHhccCCCeeEEEEEecCCCCCcceEEEEEecCHHHHHHHHHHhCCceeCCEeEEEEE
Q 025814 135 PENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMAKVVRDKRTGKTKGYGFISFANPSDIAAALKEMNGKYVGNRPIKLRK 214 (247)
Q Consensus 135 ~~~~~~lfV~nLp~~~~e~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~~FV~f~~~~~a~~Al~~l~g~~i~g~~l~V~~ 214 (247)
....++|||+|||+++++++|+++|++||.|.+|+|++|+.+|.++|||||+|.+.++|++||+.|||..|+|+.|+|.+
T Consensus 5 ~~~~~~lfV~nL~~~~t~~~l~~~F~~~g~v~~v~i~~d~~tg~~~g~afV~f~~~~~a~~A~~~l~g~~~~gr~i~V~~ 84 (99)
T d1whwa_ 5 SSGSGRLFVRNLSYTSSEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAEVDGQVFQGRMLHVLP 84 (99)
T ss_dssp CCSCEEEEEECCCTTCCHHHHHHHHHTTSCEEEEECCCCTTTCCCCSEEEEEESSHHHHHHHHHHTTTEESSSCEEEEEE
T ss_pred CCCCCEEEEECCCCcCCHHHHHHHHHhcCCceeeeecccccccccCcceEEEECCHHHHHHHHHHcCCCEECCEEEEEEE
Confidence 34456899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccc
Q 025814 215 SKWQE 219 (247)
Q Consensus 215 a~~k~ 219 (247)
++.+.
T Consensus 85 a~~~~ 89 (99)
T d1whwa_ 85 STIKK 89 (99)
T ss_dssp CCCCS
T ss_pred CCCCC
Confidence 98754
No 12
>d1u6fa1 d.58.7.1 (A:1-139) RNA-binding protein UBP1 {Trypanosoma cruzi [TaxId: 5693]}
Probab=99.88 E-value=1.1e-22 Score=154.08 Aligned_cols=85 Identities=24% Similarity=0.416 Sum_probs=80.0
Q ss_pred CCCcEEEEcCCCCCCcHHHHHHHhccCCCeeEEEEEecCCCCCcceEEEEEecCHHHHHHHHHHhCCceeCCEeEEEEEc
Q 025814 136 ENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMAKVVRDKRTGKTKGYGFISFANPSDIAAALKEMNGKYVGNRPIKLRKS 215 (247)
Q Consensus 136 ~~~~~lfV~nLp~~~~e~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~~FV~f~~~~~a~~Al~~l~g~~i~g~~l~V~~a 215 (247)
...++|||+|||+++++++|+++|+.||.|.+|+|++|+.||.++|||||+|.+.++|.+||+.|||..|+|+.|+|+++
T Consensus 40 ~~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~t~~~rg~afV~f~~~~~A~~Ai~~lng~~~~gr~l~V~~a 119 (139)
T d1u6fa1 40 DVLRNLMVNYIPTTVDEVQLRQLFERYGPIESVKIVCDRETRQSRGYGFVKFQSGSSAQQAIAGLNGFNILNKRLKVALA 119 (139)
T ss_dssp TTTSEEEEESCSTTCCHHHHHHHHHHHSCEEEEEEEEETTTTEEEEEEEEEESSHHHHHHHHHHTTTEECSSCEEEEEES
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhhccccccccccccccccccceeeEEECCHHHHHHHHHHhCCCEECCEEEEEEEc
Confidence 34568999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccc
Q 025814 216 KWQER 220 (247)
Q Consensus 216 ~~k~~ 220 (247)
+.+..
T Consensus 120 ~~~~~ 124 (139)
T d1u6fa1 120 ASGHQ 124 (139)
T ss_dssp SCCCC
T ss_pred CCCCC
Confidence 76543
No 13
>d1l3ka1 d.58.7.1 (A:8-91) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.88 E-value=9.7e-23 Score=141.16 Aligned_cols=80 Identities=26% Similarity=0.525 Sum_probs=75.4
Q ss_pred CCCcEEEEcCCCCCCcHHHHHHHhccCCCeeEEEEEecCCCCCcceEEEEEecCHHHHHHHHHHhCCceeCCEeEEEEEc
Q 025814 136 ENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMAKVVRDKRTGKTKGYGFISFANPSDIAAALKEMNGKYVGNRPIKLRKS 215 (247)
Q Consensus 136 ~~~~~lfV~nLp~~~~e~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~~FV~f~~~~~a~~Al~~l~g~~i~g~~l~V~~a 215 (247)
+..++|||+|||+++++++|+++|+.||.|.+++|++|+.+|.++|||||+|.+.++|++||+ ++|..|+|+.|+|+.|
T Consensus 4 e~~~~lfV~nlp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kG~afV~f~~~~~a~~ai~-~~~~~i~Gr~i~V~~A 82 (84)
T d1l3ka1 4 EQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN-ARPHKVDGRVVEPKRA 82 (84)
T ss_dssp GGGGEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHH-TCSCEETTEECEEEEC
T ss_pred CCCcEEEEECCCCCCCHHHHHHHHHhhccccceeecccccCCCcccEEEEEEcCHHHHHHHHH-hCCCEECCEEEEEEee
Confidence 345689999999999999999999999999999999999999999999999999999999995 7999999999999887
Q ss_pred c
Q 025814 216 K 216 (247)
Q Consensus 216 ~ 216 (247)
.
T Consensus 83 ~ 83 (84)
T d1l3ka1 83 V 83 (84)
T ss_dssp C
T ss_pred e
Confidence 5
No 14
>d2cqca1 d.58.7.1 (A:109-191) Arginine/serine-rich splicing factor 10 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.88 E-value=8.7e-23 Score=141.10 Aligned_cols=78 Identities=23% Similarity=0.409 Sum_probs=74.5
Q ss_pred CCCCcEEEEcCCCCCCcHHHHHHHhccCCCeeEEEEEecCCCCCcceEEEEEecCHHHHHHHHHHhCCceeCCEeEEE
Q 025814 135 PENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMAKVVRDKRTGKTKGYGFISFANPSDIAAALKEMNGKYVGNRPIKL 212 (247)
Q Consensus 135 ~~~~~~lfV~nLp~~~~e~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~~FV~f~~~~~a~~Al~~l~g~~i~g~~l~V 212 (247)
+...++|||+|||+++++++|+++|++||.|.+|+|++|+.+|.++|||||+|.+.++|.+|++.|||..|+|+.|+|
T Consensus 6 p~~~~~l~V~nL~~~~te~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~Ai~~l~g~~~~gr~i~V 83 (83)
T d2cqca1 6 PDPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRV 83 (83)
T ss_dssp CCGGGCEEEESCCSSCCHHHHHHHHHTTSCEEEEEEEECSSSSSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEEEE
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHHHHhCCCccccccccccccccccceEEEECCHHHHHHHHHHcCCCEECCEEeEC
Confidence 345678999999999999999999999999999999999999999999999999999999999999999999999987
No 15
>d2cqga1 d.58.7.1 (A:96-185) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.88 E-value=1.5e-22 Score=141.90 Aligned_cols=83 Identities=20% Similarity=0.344 Sum_probs=76.4
Q ss_pred CCCcEEEEcCCCCCCcHHHHHHHhccCCCeeEEEEEecCCCCCcceEEEEEecCHHHHHHHHHHhCCceeCCEeEEEEEc
Q 025814 136 ENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMAKVVRDKRTGKTKGYGFISFANPSDIAAALKEMNGKYVGNRPIKLRKS 215 (247)
Q Consensus 136 ~~~~~lfV~nLp~~~~e~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~~FV~f~~~~~a~~Al~~l~g~~i~g~~l~V~~a 215 (247)
...++|||+|||+++++++|+++|+.||.|.+|+|++|+.+|.++|||||+|.+.++|++||+. +..|+|+.|.|+++
T Consensus 6 ~~~~~lfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~srG~aFV~f~~~~~a~~al~~--~~~l~Gr~i~v~~a 83 (90)
T d2cqga1 6 QKTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQ--RHMIDGRWCDCKLP 83 (90)
T ss_dssp CCCCCEEEESCCSSCCHHHHHHHHGGGSCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHS--CEEETTEEEEEECC
T ss_pred cCCCeEEEECCCCCCCHHHHHHHHHhhcccceeeeccCCCCcccCCEEEEEECCHHHHHHHHhc--CCccCCEEeEEEeC
Confidence 3455899999999999999999999999999999999999999999999999999999999974 55899999999999
Q ss_pred ccccc
Q 025814 216 KWQER 220 (247)
Q Consensus 216 ~~k~~ 220 (247)
..+..
T Consensus 84 ~~k~~ 88 (90)
T d2cqga1 84 NSKQS 88 (90)
T ss_dssp CTTCC
T ss_pred CCCCC
Confidence 87654
No 16
>d2ghpa1 d.58.7.1 (A:116-196) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.88 E-value=4.6e-23 Score=141.87 Aligned_cols=80 Identities=9% Similarity=0.195 Sum_probs=70.1
Q ss_pred CcEEEEcCCCCCCcHHHHHHHhccCCCeeEEEEEecCCCCCcceEEEEEecCHHHHHHHHHHhCCceeCCEeEEEEEccc
Q 025814 138 DYRLFCGDLGNEVNDDVLSKAFSRFPSFNMAKVVRDKRTGKTKGYGFISFANPSDIAAALKEMNGKYVGNRPIKLRKSKW 217 (247)
Q Consensus 138 ~~~lfV~nLp~~~~e~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~~FV~f~~~~~a~~Al~~l~g~~i~g~~l~V~~a~~ 217 (247)
+++|||+|||+++++++|+++|+.||.|..+.++.+..+|.++|||||+|.+.++|.+|++.|||..++|+.|+|+++++
T Consensus 1 d~tl~v~nLp~~~t~~~l~~~f~~~G~v~~~~~~~~~~~~~~~g~afV~f~~~e~A~~Ai~~l~g~~~~g~~i~V~~a~P 80 (81)
T d2ghpa1 1 ECTLWMTNFPPSYTQRNIRDLLQDINVVALSIRLPSLRFNTSRRFAYIDVTSKEDARYCVEKLNGLKIEGYTLVTKVSNP 80 (81)
T ss_dssp SCEEEEECCCTTCCHHHHHHHHHHTTCCCCEEECC-------CCEEEEECSSHHHHHHHHHHHTTCEETTEECEEEECCC
T ss_pred CcEEEEECCCCcCCHHHHHHHHHHhCcEEeeeeecccccccccceeEEEECCHHHHHHHHHHhCCCEECCEEEEEEEccC
Confidence 36999999999999999999999999999998888888999999999999999999999999999999999999999875
No 17
>d1fxla2 d.58.7.1 (A:119-203) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.88 E-value=1.1e-22 Score=141.17 Aligned_cols=78 Identities=26% Similarity=0.509 Sum_probs=73.8
Q ss_pred CcEEEEcCCCCCCcHHHHHHHhccCCCeeEEEEEecCCCCCcceEEEEEecCHHHHHHHHHHhCCceeCC--EeEEEEEc
Q 025814 138 DYRLFCGDLGNEVNDDVLSKAFSRFPSFNMAKVVRDKRTGKTKGYGFISFANPSDIAAALKEMNGKYVGN--RPIKLRKS 215 (247)
Q Consensus 138 ~~~lfV~nLp~~~~e~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~~FV~f~~~~~a~~Al~~l~g~~i~g--~~l~V~~a 215 (247)
+++|||+|||+++++++|+++|++||.|.+++|++|+.+|.++|||||+|.+.++|.+|++.|||..++| ++|+|++|
T Consensus 6 ~~~lfV~nLp~~~te~~L~~~F~~~G~v~~v~i~~d~~~g~~kg~afV~f~~~~~a~~Ai~~lng~~~~G~~~~i~V~~A 85 (85)
T d1fxla2 6 DANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFA 85 (85)
T ss_dssp TCEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCCCTTCSSCCEEEEC
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHHhCCccccccccccccccCCCeeEEEEcCHHHHHHHHHHhCCCEeCCCCEEEEEEeC
Confidence 4589999999999999999999999999999999999999999999999999999999999999999998 55898875
No 18
>d1x4ba1 d.58.7.1 (A:8-110) Heterogeneous nuclear ribonucleoproteins A2/B1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.88 E-value=1e-22 Score=146.39 Aligned_cols=82 Identities=21% Similarity=0.470 Sum_probs=77.8
Q ss_pred CcEEEEcCCCCCCcHHHHHHHhccCCCeeEEEEEecCCCCCcceEEEEEecCHHHHHHHHHHhCCceeCCEeEEEEEccc
Q 025814 138 DYRLFCGDLGNEVNDDVLSKAFSRFPSFNMAKVVRDKRTGKTKGYGFISFANPSDIAAALKEMNGKYVGNRPIKLRKSKW 217 (247)
Q Consensus 138 ~~~lfV~nLp~~~~e~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~~FV~f~~~~~a~~Al~~l~g~~i~g~~l~V~~a~~ 217 (247)
.++|||+|||+++++++|+++|++||.|..+.|.+|+.++.++|||||+|.+.++|.+|| .++|..|+|+.|.|+++.+
T Consensus 20 ~~~lfVgnLp~~~te~~L~~~F~~~G~i~~~~i~~d~~~~~~kg~aFV~f~~~~~a~~al-~~~~~~l~G~~i~V~~a~~ 98 (103)
T d1x4ba1 20 FRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAM-AARPHSIDGRVVEPKRAVA 98 (103)
T ss_dssp HTEEEEECCTTCCCHHHHHHHHTSSCCCSEEEEECCTTTSSCCSEEEEECSSHHHHHHHH-TSCSEEETTEEEEEECCSS
T ss_pred CCEEEEeCCCCcCCHHHHHHHHHhhCcccceeecccccCCCccCeEEEEECCHHHHHHHH-HhCCCeECCEEEEEEECcc
Confidence 358999999999999999999999999999999999999999999999999999999999 5899999999999999988
Q ss_pred ccc
Q 025814 218 QER 220 (247)
Q Consensus 218 k~~ 220 (247)
+++
T Consensus 99 ke~ 101 (103)
T d1x4ba1 99 REE 101 (103)
T ss_dssp CCC
T ss_pred cCC
Confidence 764
No 19
>d1uawa_ d.58.7.1 (A:) Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.88 E-value=2e-23 Score=142.19 Aligned_cols=76 Identities=21% Similarity=0.473 Sum_probs=73.1
Q ss_pred cEEEEcCCCCCCcHHHHHHHhccCCCeeEEEEEecCCCCCcceEEEEEecCHHHHHHHHHHhCCceeCCEeEEEEEc
Q 025814 139 YRLFCGDLGNEVNDDVLSKAFSRFPSFNMAKVVRDKRTGKTKGYGFISFANPSDIAAALKEMNGKYVGNRPIKLRKS 215 (247)
Q Consensus 139 ~~lfV~nLp~~~~e~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~~FV~f~~~~~a~~Al~~l~g~~i~g~~l~V~~a 215 (247)
|+|||+|||+++++++|+++|++||.|.+++|++|+.||+++|||||+|.+.++|++||+ +|+..|+|+.|+|+.|
T Consensus 1 cklfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kG~aFV~f~~~~~a~~al~-~~~~~i~Gr~i~V~~A 76 (77)
T d1uawa_ 1 CKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLA-QSRHELDSKTIDPKVA 76 (77)
T ss_dssp CCEEEESCCSSCCSHHHHHHHTTTSCCCCEEEECCCCSSSCSSEEEECCCCTTHHHHHHH-TTTCCCSSCCCEEEEC
T ss_pred CEEEEeCCCCcCCHHHHHHHHHHhCCcceeeeecccCCCCccceEEEEECCHHHHHHHHH-cCCCEECCeEEEEEEC
Confidence 579999999999999999999999999999999999999999999999999999999995 7999999999999876
No 20
>d1b7fa2 d.58.7.1 (A:205-289) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.88 E-value=1.8e-22 Score=140.12 Aligned_cols=79 Identities=24% Similarity=0.522 Sum_probs=74.8
Q ss_pred CCcEEEEcCCCCCCcHHHHHHHhccCCCeeEEEEEecCCCCCcceEEEEEecCHHHHHHHHHHhCCceeCC--EeEEEEE
Q 025814 137 NDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMAKVVRDKRTGKTKGYGFISFANPSDIAAALKEMNGKYVGN--RPIKLRK 214 (247)
Q Consensus 137 ~~~~lfV~nLp~~~~e~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~~FV~f~~~~~a~~Al~~l~g~~i~g--~~l~V~~ 214 (247)
..++|||+|||+++++++|+++|++||.|.++++++|+.+|.++|||||+|.+.++|.+|++.|||..+.| ++|+|++
T Consensus 5 ~~t~lfV~nlp~~~te~~l~~~F~~~G~i~~~~~~~d~~~g~~~g~afV~f~~~~~A~~Ai~~l~g~~~~g~~~~l~V~~ 84 (85)
T d1b7fa2 5 KDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSVRL 84 (85)
T ss_dssp TTCEEEEESCCTTCCHHHHHHHHTSSSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCCCTTCSSCCEEEE
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhhCCEeeeeeecccccccCceeEEEEECCHHHHHHHHHHHCCCEeCCCCeEEEEEE
Confidence 34589999999999999999999999999999999999999999999999999999999999999999876 8899998
Q ss_pred c
Q 025814 215 S 215 (247)
Q Consensus 215 a 215 (247)
|
T Consensus 85 A 85 (85)
T d1b7fa2 85 A 85 (85)
T ss_dssp C
T ss_pred C
Confidence 6
No 21
>d1x5sa1 d.58.7.1 (A:8-97) Cold-inducible RNA-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.87 E-value=7.2e-23 Score=143.67 Aligned_cols=84 Identities=31% Similarity=0.609 Sum_probs=79.2
Q ss_pred CCcEEEEcCCCCCCcHHHHHHHhccCCCeeEEEEEecCCCCCcceEEEEEecCHHHHHHHHHHhCCceeCCEeEEEEEcc
Q 025814 137 NDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMAKVVRDKRTGKTKGYGFISFANPSDIAAALKEMNGKYVGNRPIKLRKSK 216 (247)
Q Consensus 137 ~~~~lfV~nLp~~~~e~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~~FV~f~~~~~a~~Al~~l~g~~i~g~~l~V~~a~ 216 (247)
+.++|||+|||+++++++|+++|++||.|..+.++++..+|.++|||||+|.+.++|+.|++.|||..|+|+.|+|+++.
T Consensus 4 ~~~kifV~nLp~~~t~~~l~~~F~~~G~i~~~~~~~~~~~~~~~g~afV~f~~~~~a~~Ai~~l~~~~~~g~~l~V~~a~ 83 (90)
T d1x5sa1 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQAG 83 (90)
T ss_dssp CCSEEEEESCCTTCCHHHHHHHHHHHSCCCEEEECCCSSSCSCCSEEEEECSSHHHHHHHHHHHTTCCTTSCCCEEEEEE
T ss_pred CCCEEEEECCCCcCCHHHHHHhhhccccccceeeccccccccccceEEEEECCHHHHHHHHHHcCCCEECCEEEEEEEcC
Confidence 45589999999999999999999999999999999998999999999999999999999999999999999999999987
Q ss_pred cccc
Q 025814 217 WQER 220 (247)
Q Consensus 217 ~k~~ 220 (247)
.+..
T Consensus 84 ~~~~ 87 (90)
T d1x5sa1 84 KSSD 87 (90)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 6553
No 22
>d2cpha1 d.58.7.1 (A:454-547) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.87 E-value=1.4e-22 Score=143.35 Aligned_cols=84 Identities=17% Similarity=0.364 Sum_probs=77.7
Q ss_pred CCcEEEEcCCCCCCcHHHHHHHhccCCCeeEEEEEecC-CCCCcceEEEEEecCHHHHHHHHHHh-CCceeCCEeEEEEE
Q 025814 137 NDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMAKVVRDK-RTGKTKGYGFISFANPSDIAAALKEM-NGKYVGNRPIKLRK 214 (247)
Q Consensus 137 ~~~~lfV~nLp~~~~e~~L~~~F~~~G~i~~v~i~~~~-~tg~~kg~~FV~f~~~~~a~~Al~~l-~g~~i~g~~l~V~~ 214 (247)
...+|||+|||+++++++|+++|+.||.|.+|+|+++. .+|.++|||||+|.+.++|.+||+.| ||..|+|+.|+|++
T Consensus 7 ~~~~l~V~nLp~~~~e~~l~~~F~~~G~i~~v~i~~~~~~~g~~rg~afV~f~~~~~A~~Ai~~l~~~~~~~Gr~l~V~~ 86 (94)
T d2cpha1 7 TTSKILVRNIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKAFNALCHSTHLYGRRLVLEW 86 (94)
T ss_dssp CCCCEEEESCCTTCCHHHHHHHHHTTSCEEEEECCCCCSSSCSSCSEEEEEESSHHHHHHHHHHHHTCCBSSSCBCEEEE
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHhCCceEEEEEeccccCCCcccEEEEEECCHHHHHHHHHHccCCcEECCEEEEEEE
Confidence 34589999999999999999999999999999999875 48999999999999999999999998 89999999999999
Q ss_pred cccccc
Q 025814 215 SKWQER 220 (247)
Q Consensus 215 a~~k~~ 220 (247)
|+.+.+
T Consensus 87 A~~~~~ 92 (94)
T d2cpha1 87 ADSEVT 92 (94)
T ss_dssp CCCCCC
T ss_pred cCCCCC
Confidence 987654
No 23
>d1p1ta_ d.58.7.1 (A:) Cleavage stimulation factor, 64 kda subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.87 E-value=9.3e-23 Score=146.95 Aligned_cols=81 Identities=25% Similarity=0.531 Sum_probs=77.8
Q ss_pred cEEEEcCCCCCCcHHHHHHHhccCCCeeEEEEEecCCCCCcceEEEEEecCHHHHHHHHHHhCCceeCCEeEEEEEcccc
Q 025814 139 YRLFCGDLGNEVNDDVLSKAFSRFPSFNMAKVVRDKRTGKTKGYGFISFANPSDIAAALKEMNGKYVGNRPIKLRKSKWQ 218 (247)
Q Consensus 139 ~~lfV~nLp~~~~e~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~~FV~f~~~~~a~~Al~~l~g~~i~g~~l~V~~a~~k 218 (247)
++|||+|||+++++++|+++|++||.|.+|+|++++.+|.++|||||+|.+.++|++|++.|||..|+|+.|+|+++..+
T Consensus 9 rtl~V~nLp~~~te~~l~~~f~~~G~i~~v~i~~~~~tg~~~g~afV~f~~~~~a~~ai~~l~~~~~~g~~i~V~~a~~~ 88 (104)
T d1p1ta_ 9 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASE 88 (104)
T ss_dssp SCEEEESCCTTSCHHHHHHHHHTTSCCSEEEEEEETTTTEEEEEEEEECSCHHHHHHHHHHSSSBSCSSSCBEEEETTCT
T ss_pred CEEEEECCCCcCCHHHHHHhhhccccccccccccccceeccCCceEEEECCHHHHHHHHHHcCCCEECCEEEEEEECCCC
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999998765
Q ss_pred c
Q 025814 219 E 219 (247)
Q Consensus 219 ~ 219 (247)
.
T Consensus 89 ~ 89 (104)
T d1p1ta_ 89 K 89 (104)
T ss_dssp T
T ss_pred C
Confidence 4
No 24
>d2cq4a1 d.58.7.1 (A:132-232) RNA binding protein 23 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.87 E-value=1.1e-22 Score=145.77 Aligned_cols=79 Identities=19% Similarity=0.409 Sum_probs=75.3
Q ss_pred CcEEEEcCCCCCCcHHHHHHHhccCCCeeEEEEEecCCCCCcceEEEEEecCHHHHHHHHHHhCCceeCCEeEEEEEccc
Q 025814 138 DYRLFCGDLGNEVNDDVLSKAFSRFPSFNMAKVVRDKRTGKTKGYGFISFANPSDIAAALKEMNGKYVGNRPIKLRKSKW 217 (247)
Q Consensus 138 ~~~lfV~nLp~~~~e~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~~FV~f~~~~~a~~Al~~l~g~~i~g~~l~V~~a~~ 217 (247)
.++|||+||++++++++|+++|+.||.|.+|+|++|+.+|.++|||||+|.+.++|.+|+ .|||..|+|+.|+|+++..
T Consensus 18 ~~tifV~nL~~~~te~~l~~~F~~~G~V~~v~i~~d~~tg~~kG~afV~F~~~e~a~~A~-~l~g~~~~G~~l~V~~a~~ 96 (101)
T d2cq4a1 18 ARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAI-GLTGQRLLGVPIIVQASQA 96 (101)
T ss_dssp HTEEEEESCCTTCCHHHHHHHHTTTSCEEEEEECCSCCSSSCCCCEEEEESCGGGHHHHH-HHTTEEETTEEEEEEEHHH
T ss_pred CCEEEEECCCCCCCHHHHHHHHcCCCeEEEEEeeecCCCccccceEEEEECCHHHHHHHH-HHCCCEECCEEEEEEECCC
Confidence 358999999999999999999999999999999999999999999999999999999999 5999999999999999754
No 25
>d2cpfa1 d.58.7.1 (A:362-446) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.87 E-value=2.3e-22 Score=139.51 Aligned_cols=79 Identities=23% Similarity=0.493 Sum_probs=73.6
Q ss_pred EEEcCCCCCCcHHHHHHHhccCCCeeEEEEEecCCCC---CcceEEEEEecCHHHHHHHHHHhCCceeCCEeEEEEEccc
Q 025814 141 LFCGDLGNEVNDDVLSKAFSRFPSFNMAKVVRDKRTG---KTKGYGFISFANPSDIAAALKEMNGKYVGNRPIKLRKSKW 217 (247)
Q Consensus 141 lfV~nLp~~~~e~~L~~~F~~~G~i~~v~i~~~~~tg---~~kg~~FV~f~~~~~a~~Al~~l~g~~i~g~~l~V~~a~~ 217 (247)
|||+|||+++++++|+++|++||.|.++.|++++.++ .++|||||+|.+.++|.+|++.|||..|+|+.|+|++++.
T Consensus 1 LfV~nLp~~~t~~~l~~~F~~~G~v~~v~i~~~~~~~~~~~~kG~afV~f~~~~~A~~A~~~~~~~~~~g~~i~V~~a~~ 80 (85)
T d2cpfa1 1 LFIKNLNFSTTEETLKGVFSKVGAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKALKQLQGHTVDGHKLEVRISER 80 (85)
T ss_dssp EEEESCCTTCCHHHHHHHHHTTSCEEEEEEEEEECTTCCEEEEEEEEEEESSHHHHHHHHHHSTTCEETTEECEEECSSC
T ss_pred CEEcCCCCCCCHHHHHHHHHHhCCccccceecccccccccccceEEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCC
Confidence 8999999999999999999999999999999987665 4789999999999999999999999999999999999865
Q ss_pred cc
Q 025814 218 QE 219 (247)
Q Consensus 218 k~ 219 (247)
..
T Consensus 81 ~~ 82 (85)
T d2cpfa1 81 AT 82 (85)
T ss_dssp SS
T ss_pred CC
Confidence 43
No 26
>d1x5ta1 d.58.7.1 (A:8-90) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.87 E-value=1.2e-22 Score=140.32 Aligned_cols=79 Identities=38% Similarity=0.682 Sum_probs=74.9
Q ss_pred EEEcCCCCCCcHHHHHHHhccCCCeeEE-EEEecCCCCCcceEEEEEecCHHHHHHHHHHhCCceeCCEeEEEEEccccc
Q 025814 141 LFCGDLGNEVNDDVLSKAFSRFPSFNMA-KVVRDKRTGKTKGYGFISFANPSDIAAALKEMNGKYVGNRPIKLRKSKWQE 219 (247)
Q Consensus 141 lfV~nLp~~~~e~~L~~~F~~~G~i~~v-~i~~~~~tg~~kg~~FV~f~~~~~a~~Al~~l~g~~i~g~~l~V~~a~~k~ 219 (247)
|||+|||+++++++|+++|++||.|.++ ++++++.+|+++|||||+|.+.++|.+||+.|||..++|+.|+|+++.+++
T Consensus 1 lfV~nLp~~~te~~l~~~F~~~G~i~~~~~i~~~~~~g~~~g~afV~f~~~~~a~~Ai~~~~g~~~~gr~l~v~~a~~k~ 80 (83)
T d1x5ta1 1 IFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKD 80 (83)
T ss_dssp EEEECCCTTCCHHHHHHHHHTTSCBSSCCEECCCTTTCSCCSEEEEEBSSHHHHHHHHHTTTTCEETTEECEEEESCCCC
T ss_pred CEEcCCCCcCcHHHHHHHHHHhCceeeeEEEEeeccccccCceEEEEECCHHHHHHHHHhCCCcEECCEEEEEEEecCCC
Confidence 7999999999999999999999999764 789999999999999999999999999999999999999999999998765
No 27
>d2cqda1 d.58.7.1 (A:1-103) RNA-binding region containing protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.87 E-value=2.3e-22 Score=144.55 Aligned_cols=83 Identities=28% Similarity=0.466 Sum_probs=76.6
Q ss_pred CCCcEEEEcCCCCCCcHHHHHHHhccCCCeeEEEEEecCCCCCcceEEEEEecCHHHHHHHHHHhCCceeCCEeEEEEEc
Q 025814 136 ENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMAKVVRDKRTGKTKGYGFISFANPSDIAAALKEMNGKYVGNRPIKLRKS 215 (247)
Q Consensus 136 ~~~~~lfV~nLp~~~~e~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~~FV~f~~~~~a~~Al~~l~g~~i~g~~l~V~~a 215 (247)
...++|||+|||+++++++|+++|+.||.|.+|+|++|+.||.++|||||+|.+.++|++||+.+|+ .|+|+.|+|+++
T Consensus 8 ~~~~~lfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kg~afV~f~~~~~A~~Ai~~~~~-~l~Gr~l~V~~a 86 (103)
T d2cqda1 8 TTFTKIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPNP-IIDGRKANVNLA 86 (103)
T ss_dssp CSSSEEEEECCCSSCCHHHHHHHHHTTSCEEEEEESCCSSSCCCCSEEEEEESSHHHHHHHHTCSSC-EETTEECEEEES
T ss_pred CCCcEEEEeCCCCcCcHHHHHHHHhhcccccceeccccccccccCCeEEEEECCHHHHHHHHHHCCC-cCCCEEEEEEEc
Confidence 3445899999999999999999999999999999999999999999999999999999999988876 799999999998
Q ss_pred cccc
Q 025814 216 KWQE 219 (247)
Q Consensus 216 ~~k~ 219 (247)
..+.
T Consensus 87 ~~~~ 90 (103)
T d2cqda1 87 YLGA 90 (103)
T ss_dssp TTTC
T ss_pred CCCC
Confidence 7543
No 28
>d2cq3a1 d.58.7.1 (A:110-202) RNA-binding protein 9 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.87 E-value=9.8e-22 Score=138.65 Aligned_cols=84 Identities=21% Similarity=0.402 Sum_probs=77.1
Q ss_pred CCCCcEEEEcCCCCCCcHHHHHHHhccCCCeeEEEEEecCCCCCcceEEEEEecCHHHHHHHHHHhCCceeCCEeEEEEE
Q 025814 135 PENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMAKVVRDKRTGKTKGYGFISFANPSDIAAALKEMNGKYVGNRPIKLRK 214 (247)
Q Consensus 135 ~~~~~~lfV~nLp~~~~e~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~~FV~f~~~~~a~~Al~~l~g~~i~g~~l~V~~ 214 (247)
....++|||+|||+++++++|+++|+.||.|.+|+++.++ +.++|||||+|.+.++|.+|+..|||..|+|+.|+|++
T Consensus 8 ~~~~~~l~v~nLp~~~t~~~L~~~F~~~G~v~~v~~~~~~--~~~kg~afV~f~~~~~a~~Ai~~l~~~~~~g~~l~V~~ 85 (93)
T d2cq3a1 8 KSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNE--RGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNN 85 (93)
T ss_dssp SCCCCEEEEESCCTTCCHHHHHHHGGGTSCEEEEEEECCT--TTTCCEEEEEESCHHHHHHHHHHHTTCEETTEECEEEE
T ss_pred CCCCCEEEEECCCCCCCHHHHHHHHhhcceeeeccccccc--cCCcceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEe
Confidence 4445689999999999999999999999999999999985 44799999999999999999999999999999999999
Q ss_pred cccccc
Q 025814 215 SKWQER 220 (247)
Q Consensus 215 a~~k~~ 220 (247)
|+.+..
T Consensus 86 A~~r~~ 91 (93)
T d2cq3a1 86 ATARVM 91 (93)
T ss_dssp CCSSCC
T ss_pred cCcCCC
Confidence 987654
No 29
>d1no8a_ d.58.7.1 (A:) Nuclear factor Aly {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.87 E-value=2.4e-22 Score=137.17 Aligned_cols=76 Identities=25% Similarity=0.460 Sum_probs=73.6
Q ss_pred EEEEcCCCCCCcHHHHHHHhccCCCeeEEEEEecCCCCCcceEEEEEecCHHHHHHHHHHhCCceeCCEeEEEEEcc
Q 025814 140 RLFCGDLGNEVNDDVLSKAFSRFPSFNMAKVVRDKRTGKTKGYGFISFANPSDIAAALKEMNGKYVGNRPIKLRKSK 216 (247)
Q Consensus 140 ~lfV~nLp~~~~e~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~~FV~f~~~~~a~~Al~~l~g~~i~g~~l~V~~a~ 216 (247)
+|||+|||+++++++|+++|+.||.|.+++|..++ +|+++|||||+|.+.++|++|++.|||..++|+.|+|+++.
T Consensus 2 rl~V~nLp~~~~~~~l~~~F~~~G~v~~~~i~~~~-~g~~~g~afV~f~~~~~A~~Ai~~l~g~~l~g~~l~V~~a~ 77 (78)
T d1no8a_ 2 KLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDR-SGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVT 77 (78)
T ss_dssp EEEEESCCTTCCHHHHHHHHHHHSCEEEEEESCSS-CCCSCCEEEEEESCHHHHHHHHHHHTTCEETTEECEEEEEC
T ss_pred EEEEECCCCCCCHHHHHHHHHHhCCCeEEEEEEee-ccccceeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEee
Confidence 69999999999999999999999999999999995 89999999999999999999999999999999999999875
No 30
>d1hd0a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein d0 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.87 E-value=1.2e-22 Score=137.62 Aligned_cols=75 Identities=20% Similarity=0.453 Sum_probs=71.5
Q ss_pred EEEEcCCCCCCcHHHHHHHhccCCCeeEEEEEecCCCCCcceEEEEEecCHHHHHHHHHHhCCceeCCEeEEEEEc
Q 025814 140 RLFCGDLGNEVNDDVLSKAFSRFPSFNMAKVVRDKRTGKTKGYGFISFANPSDIAAALKEMNGKYVGNRPIKLRKS 215 (247)
Q Consensus 140 ~lfV~nLp~~~~e~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~~FV~f~~~~~a~~Al~~l~g~~i~g~~l~V~~a 215 (247)
+|||+|||+++++++|+++|++||.|.++.|++|+.+|+++|||||+|.+.++|++||+ +++..|+|+.|.|+.|
T Consensus 1 klfV~nl~~~~te~~l~~~F~~~G~i~~~~i~~d~~t~~~kg~afV~f~~~~~a~~Al~-~~~~~l~Gr~i~V~rA 75 (75)
T d1hd0a_ 1 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMD-QKEHKLNGKVIDPKRA 75 (75)
T ss_dssp CEEEECCCTTCCHHHHHHHHHTTSCEEEEECCCBTTTTBCCSEEEEEESSHHHHHHHHH-TCCCCBTTBCCEECCC
T ss_pred CEEEeCCCCcCCHHHHHHHHHhhccccccccccCCCCCCcCceEEEEECCHHHHHHHHh-cCCCEECCCEEEeeEC
Confidence 49999999999999999999999999999999999999999999999999999999995 8999999999999654
No 31
>d2cqia1 d.58.7.1 (A:1-90) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.87 E-value=7.4e-22 Score=138.44 Aligned_cols=83 Identities=23% Similarity=0.418 Sum_probs=75.7
Q ss_pred CCCCcEEEEcCCCCCCcHHHHHHHhccCCCeeEEEEEecCCCCCcceEEEEEecCHHHHHHHHHHhCCceeCCEeEEEEE
Q 025814 135 PENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMAKVVRDKRTGKTKGYGFISFANPSDIAAALKEMNGKYVGNRPIKLRK 214 (247)
Q Consensus 135 ~~~~~~lfV~nLp~~~~e~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~~FV~f~~~~~a~~Al~~l~g~~i~g~~l~V~~ 214 (247)
..+.++|||+|||.++++++|+++|+.||.|.+|++++++.++ +|||||+|.+.++|++|++.|||..|+|+.|+|.+
T Consensus 5 ~~~~~tl~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~~~--~~~afV~f~~~~~A~~A~~~l~~~~~~g~~i~v~~ 82 (90)
T d2cqia1 5 DGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSN--DPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNW 82 (90)
T ss_dssp SCCCCEEEEESCCTTCCHHHHHHHHHHHSCEEEEEEECCCCSS--CCEEEEEESSHHHHHHHHHHHTTEEETTEEEEEEE
T ss_pred CCCCCEEEEECCCCCCCHHHHHHHHHhcCCceeeeeecccCcc--ceeeEEEECCHHHHHHHHHHcCCCEECCEEEEEEE
Confidence 3445699999999999999999999999999999999986544 78999999999999999999999999999999999
Q ss_pred ccccc
Q 025814 215 SKWQE 219 (247)
Q Consensus 215 a~~k~ 219 (247)
++...
T Consensus 83 a~~~~ 87 (90)
T d2cqia1 83 ATTPS 87 (90)
T ss_dssp CCCTT
T ss_pred cCCCC
Confidence 97643
No 32
>d1l3ka2 d.58.7.1 (A:103-181) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.86 E-value=7.5e-22 Score=134.99 Aligned_cols=76 Identities=17% Similarity=0.485 Sum_probs=73.0
Q ss_pred cEEEEcCCCCCCcHHHHHHHhccCCCeeEEEEEecCCCCCcceEEEEEecCHHHHHHHHHHhCCceeCCEeEEEEEc
Q 025814 139 YRLFCGDLGNEVNDDVLSKAFSRFPSFNMAKVVRDKRTGKTKGYGFISFANPSDIAAALKEMNGKYVGNRPIKLRKS 215 (247)
Q Consensus 139 ~~lfV~nLp~~~~e~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~~FV~f~~~~~a~~Al~~l~g~~i~g~~l~V~~a 215 (247)
++|||+|||+++++++|+++|+.||.|..+.+..++.++.++|||||+|.+.+++.+|+ .|||..|+|+.|+|+.|
T Consensus 3 r~lfV~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~g~afV~f~~~e~~~~al-~~~~~~l~Gr~i~V~~A 78 (79)
T d1l3ka2 3 KKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIV-IQKYHTVNGHNCEVRKA 78 (79)
T ss_dssp SEEEEECCTTTCCHHHHHHHHTTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHH-HCSCCEETTEECEEEEC
T ss_pred CEEEECCCCCcCCHHHHHHHHHHhccccccccccCCCCcccccEEEEEEcCHHHHHHHH-HhCCCEECCEEEEEEEC
Confidence 48999999999999999999999999999999999999999999999999999999999 68999999999999876
No 33
>d1u1qa_ d.58.7.1 (A:) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.86 E-value=1e-21 Score=154.87 Aligned_cols=145 Identities=14% Similarity=0.311 Sum_probs=116.0
Q ss_pred CCccccccccchhhhcCCCceeeCccCHHHHHHHHhcC--ccchhhhhhcccccccccCCCCCCCCCCCCCCCCcEEEEc
Q 025814 67 APVYSLPQYHQAQQLFQRDAQTITPEALESVKAALASS--DIEHKAETKKKSIPRKAAGQTWEDPTLAEWPENDYRLFCG 144 (247)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~a~~al~~~--~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~lfV~ 144 (247)
|.+..+....+.....+++++||.|.+.+++..|+... .+..+.+.......+..... .......++|||+
T Consensus 31 G~v~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~i~V~ 103 (183)
T d1u1qa_ 31 GTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQR-------PGAHLTVKKIFVG 103 (183)
T ss_dssp SCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHTCSCEETTEECEEEECCCTTGGGS-------TTTTCCCSEEEEE
T ss_pred CCEEEEEeeecccCCCccCceecccCCHHHHHHHHHhcCCcccccchhhhhhhhcccccc-------cccccccceeEEc
Confidence 66666666666677888999999999999999999864 33344333333222221111 1123445699999
Q ss_pred CCCCCCcHHHHHHHhccCCCeeEEEEEecCCCCCcceEEEEEecCHHHHHHHHHHhCCceeCCEeEEEEEccccc
Q 025814 145 DLGNEVNDDVLSKAFSRFPSFNMAKVVRDKRTGKTKGYGFISFANPSDIAAALKEMNGKYVGNRPIKLRKSKWQE 219 (247)
Q Consensus 145 nLp~~~~e~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~~FV~f~~~~~a~~Al~~l~g~~i~g~~l~V~~a~~k~ 219 (247)
|||+.+++++|+++|+.||.|..+.|+.++.+|.++|||||+|.+.++|.+||+ +++..|+|+.|+|.+|.+|.
T Consensus 104 ~lp~~~te~~L~~~f~~~G~v~~~~i~~~~~~~~~~g~~fV~f~~~e~A~~Al~-~~~~~~~G~~i~V~~A~~k~ 177 (183)
T d1u1qa_ 104 GIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVI-QKYHTVNGHNCEVRKALSKQ 177 (183)
T ss_dssp CCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESCHHHHHHHHT-SSCEEETTEEEEEEECCCHH
T ss_pred cCCCcCCHHHHhhhhccCCceeeeeeecccccCccceeEEEEECCHHHHHHHHH-hCCCeECCEEEEEEecCCcc
Confidence 999999999999999999999999999999999999999999999999999995 89999999999999987654
No 34
>d1cvja2 d.58.7.1 (A:91-179) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.86 E-value=5.2e-22 Score=138.95 Aligned_cols=79 Identities=28% Similarity=0.513 Sum_probs=74.0
Q ss_pred cEEEEcCCCCCCcHHHHHHHhccCCCeeEEEEEecCCCCCcceEEEEEecCHHHHHHHHHHhCCceeCCEeEEEEEcccc
Q 025814 139 YRLFCGDLGNEVNDDVLSKAFSRFPSFNMAKVVRDKRTGKTKGYGFISFANPSDIAAALKEMNGKYVGNRPIKLRKSKWQ 218 (247)
Q Consensus 139 ~~lfV~nLp~~~~e~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~~FV~f~~~~~a~~Al~~l~g~~i~g~~l~V~~a~~k 218 (247)
.+|||+|||+++++++|+++|+.||.|.+++|+.++ +.++|||||+|.+.++|++||+.|||..|+|+.|+|++++.+
T Consensus 9 ~~l~V~nLp~~~t~~~l~~~F~~~G~v~~~~i~~~~--~~~kg~afV~f~~~~~A~~Ai~~l~g~~~~g~~i~V~~a~~~ 86 (89)
T d1cvja2 9 GNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSR 86 (89)
T ss_dssp TEEEEESCCSSCCHHHHHHHHHTTSCEEEEEECCBT--TBCCSCEEEEESCHHHHHHHTTSSSEEEETTEEEEEEECCCT
T ss_pred CEEEEeCCCCCCCHHHHHHHHHhcCCceEEEEEeec--CCCcceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEECCCC
Confidence 389999999999999999999999999999999985 457899999999999999999999999999999999999865
Q ss_pred c
Q 025814 219 E 219 (247)
Q Consensus 219 ~ 219 (247)
.
T Consensus 87 ~ 87 (89)
T d1cvja2 87 K 87 (89)
T ss_dssp T
T ss_pred C
Confidence 4
No 35
>d1x4ha1 d.58.7.1 (A:8-105) RNA-binding protein 28 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.86 E-value=1.1e-21 Score=139.61 Aligned_cols=86 Identities=17% Similarity=0.329 Sum_probs=79.1
Q ss_pred CCCCcEEEEcCCCCCCcHHHHHHHhccCCCeeEEEEEecCCCCCcceEEEEEecCHHHHHHHHHHhC------CceeCCE
Q 025814 135 PENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMAKVVRDKRTGKTKGYGFISFANPSDIAAALKEMN------GKYVGNR 208 (247)
Q Consensus 135 ~~~~~~lfV~nLp~~~~e~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~~FV~f~~~~~a~~Al~~l~------g~~i~g~ 208 (247)
..++++|||+|||+++++++|+++|++||.|.++.++.+..++.++|||||+|.+.++|.+||+.|| |..|+|+
T Consensus 5 ~~~~~tlfV~nLp~~~te~~l~~~f~~~G~v~~~~~~~~~~~~~~~g~afV~F~~~~~a~~ai~~l~~~~~~~g~~~~gr 84 (98)
T d1x4ha1 5 VTEGKTVFIRNLSFDSEEEALGEVLQQFGDLKYVRVVLHPDTEHSKGCAFAQFMTQEAAQKCLAAASLEAEGGGLKLDGR 84 (98)
T ss_dssp CCCCCCEEEESCCTTCCHHHHHHHHHTTSCEEEEECCBCSSSCCBCSEEEEEESSHHHHHHHHHHHCTTTTTCCEESSSC
T ss_pred CCCCCEEEEcCCCCcCCHHHHHHHHhccccceeeeeccccccccccceEEEEEcCHHHHHHHHHHcccccccCCcEECCE
Confidence 3456689999999999999999999999999999999999999999999999999999999999886 6789999
Q ss_pred eEEEEEcccccc
Q 025814 209 PIKLRKSKWQER 220 (247)
Q Consensus 209 ~l~V~~a~~k~~ 220 (247)
.|+|+++.++.+
T Consensus 85 ~l~v~~a~~k~~ 96 (98)
T d1x4ha1 85 QLKVDLAVTRDE 96 (98)
T ss_dssp EEEEECCCCCCC
T ss_pred EEEEEECCCCCc
Confidence 999999987653
No 36
>d1x0fa1 d.58.7.1 (A:183-257) Nuclear ribonucleoprotein D0 (AUF1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.86 E-value=1.7e-22 Score=136.85 Aligned_cols=75 Identities=20% Similarity=0.442 Sum_probs=71.3
Q ss_pred EEEEcCCCCCCcHHHHHHHhccCCCeeEEEEEecCCCCCcceEEEEEecCHHHHHHHHHHhCCceeCCEeEEEEEc
Q 025814 140 RLFCGDLGNEVNDDVLSKAFSRFPSFNMAKVVRDKRTGKTKGYGFISFANPSDIAAALKEMNGKYVGNRPIKLRKS 215 (247)
Q Consensus 140 ~lfV~nLp~~~~e~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~~FV~f~~~~~a~~Al~~l~g~~i~g~~l~V~~a 215 (247)
+|||||||+++++++|+++|++||.|.+|+|++|+.+|+++|||||+|.+.++|++|| .+++..|+|+.|.|+.|
T Consensus 1 klfVgnLp~~~te~~l~~~F~~~G~I~~v~i~~d~~t~~~rG~~FV~f~~~~~a~~al-~~~~~~i~g~~i~vk~A 75 (75)
T d1x0fa1 1 KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIM-EKKYHNVGLSKCEIKVA 75 (75)
T ss_dssp EEEEESCCSSCCHHHHHHHHHHHSCEEEEECCCCTTTCCTTCCEEEEESSSHHHHHHT-TCSSCCBTTBCCEEECC
T ss_pred CEEEcCCCCCCCHHHHHHHHHHhCCcccccccccccccccccEEEEEECCHHHHHHHH-hhCCCEECCEEeEEEEC
Confidence 5999999999999999999999999999999999999999999999999999999999 46888999999999865
No 37
>d2ghpa3 d.58.7.1 (A:206-291) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.85 E-value=7.2e-22 Score=137.31 Aligned_cols=80 Identities=23% Similarity=0.382 Sum_probs=70.2
Q ss_pred CcEEEEcCCCCCCc-HHHHHHHhccCCCeeEEEEEec-CCCCCcceEEEEEecCHHHHHHHHHHhCCceeCCEeEEEEEc
Q 025814 138 DYRLFCGDLGNEVN-DDVLSKAFSRFPSFNMAKVVRD-KRTGKTKGYGFISFANPSDIAAALKEMNGKYVGNRPIKLRKS 215 (247)
Q Consensus 138 ~~~lfV~nLp~~~~-e~~L~~~F~~~G~i~~v~i~~~-~~tg~~kg~~FV~f~~~~~a~~Al~~l~g~~i~g~~l~V~~a 215 (247)
.++|||+|||++++ +++|+++|++||.|.+|+|.++ ..+|.++|||||+|.+.++|++|| .|||..|+|+.|+|+++
T Consensus 4 ~~~l~V~nLp~~~t~ed~l~~~F~~~G~i~~v~i~~~~~~~~~~kg~afV~f~~~~~a~~Al-~~n~~~~~gr~l~V~~a 82 (86)
T d2ghpa3 4 GREIMIRNLSTELLDENLLRESFEGFGSIEKINIPAGQKEHSFNNCCAFMVFENKDSAERAL-QMNRSLLGNREISVSLA 82 (86)
T ss_dssp TTEEEEEEECTTTCCHHHHHHHHGGGSCEEEEECCSCCC---CCCEEEEEEESSHHHHHHHG-GGTTEEETTEEEEEEEC
T ss_pred CCEEEEECCCCCcccHHHHHHHHHhhhhccceeeecccCCccccceeeeEEECCHHHHHHHH-hcCCCEECCEEEEEEEc
Confidence 45999999999976 5679999999999999998764 578999999999999999999999 59999999999999999
Q ss_pred ccc
Q 025814 216 KWQ 218 (247)
Q Consensus 216 ~~k 218 (247)
+++
T Consensus 83 ~~k 85 (86)
T d2ghpa3 83 DKK 85 (86)
T ss_dssp CCC
T ss_pred CCC
Confidence 765
No 38
>d2cpea1 d.58.7.1 (A:353-453) RNA-binding protein EWS {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.85 E-value=2.2e-21 Score=138.76 Aligned_cols=85 Identities=24% Similarity=0.375 Sum_probs=77.7
Q ss_pred CCCCcEEEEcCCCCCCcHHHHHHHhccCCCee--------EEEEEecCCCCCcceEEEEEecCHHHHHHHHHHhCCceeC
Q 025814 135 PENDYRLFCGDLGNEVNDDVLSKAFSRFPSFN--------MAKVVRDKRTGKTKGYGFISFANPSDIAAALKEMNGKYVG 206 (247)
Q Consensus 135 ~~~~~~lfV~nLp~~~~e~~L~~~F~~~G~i~--------~v~i~~~~~tg~~kg~~FV~f~~~~~a~~Al~~l~g~~i~ 206 (247)
..+..+|||+|||+++++++|+++|+.||.|. .+.+.+++.+|.++|||||+|.+.++|.+||+.|||..|+
T Consensus 5 ~~~~~~i~V~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~d~~~~~~~g~afV~f~~~~~a~~Ai~~l~g~~~~ 84 (101)
T d2cpea1 5 DSDNSAIYVQGLNDSVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYEDPPTAKAAVEWFDGKDFQ 84 (101)
T ss_dssp CCCCCEEEEECCCTTCCHHHHHHHHTTTSCBCBCSSSCCBSEECCBCTTTCSBCSEEEEEBSSHHHHHHHHHHHTTCEET
T ss_pred CCCCCEEEEECCCCcCCHHHHHHHHHHCceEEEeeecccceeEEeeccccccccceeeEEecCHHHHHHHHHHhCCCEEC
Confidence 34566999999999999999999999999873 5677888889999999999999999999999999999999
Q ss_pred CEeEEEEEccccc
Q 025814 207 NRPIKLRKSKWQE 219 (247)
Q Consensus 207 g~~l~V~~a~~k~ 219 (247)
|+.|+|++++.+.
T Consensus 85 gr~i~V~~a~~~~ 97 (101)
T d2cpea1 85 GSKLKVSLARKKP 97 (101)
T ss_dssp TEECEEECSSCCC
T ss_pred CEEEEEEEcCCCC
Confidence 9999999998654
No 39
>d2f9da1 d.58.7.1 (A:12-125) Pre-mRNA branch site protein p14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.85 E-value=1.9e-21 Score=142.29 Aligned_cols=79 Identities=16% Similarity=0.265 Sum_probs=73.3
Q ss_pred CCCcEEEEcCCCCCCcHHHHHHHhccCCCeeEEEEEecCCCCCcceEEEEEecCHHHHHHHHHHhCCceeCCEeEEEEEc
Q 025814 136 ENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMAKVVRDKRTGKTKGYGFISFANPSDIAAALKEMNGKYVGNRPIKLRKS 215 (247)
Q Consensus 136 ~~~~~lfV~nLp~~~~e~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~~FV~f~~~~~a~~Al~~l~g~~i~g~~l~V~~a 215 (247)
+..++|||+|||+++++++|+++|++||.|.+|++..+ +.++|||||+|.+.++|..||+.|||..|+|+.|+|.++
T Consensus 5 ~~~r~l~V~nLp~~~te~~l~~~F~~~G~v~~i~~~~~---~~~kG~afV~f~~~~~A~~Ai~~l~g~~~~gr~l~V~~a 81 (114)
T d2f9da1 5 EVNRILYIRNLPYKITAEEMYDIFGKYGPIRQIRVGNT---PETRGTAYVVYEDIFDAKNACDHLSGFNVCNRYLVVLYY 81 (114)
T ss_dssp TCCSEEEEESCCTTCCHHHHHHHHHTTSCEEEEEEECS---TTTTTEEEEEESSHHHHHHHHHHHTTCEETTEECEEEEC
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHhhcCCeEeeccccc---CCcCCeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEc
Confidence 44569999999999999999999999999999998764 677999999999999999999999999999999999998
Q ss_pred cc
Q 025814 216 KW 217 (247)
Q Consensus 216 ~~ 217 (247)
..
T Consensus 82 ~~ 83 (114)
T d2f9da1 82 NA 83 (114)
T ss_dssp CH
T ss_pred CC
Confidence 64
No 40
>d2msta_ d.58.7.1 (A:) Neural RNA-binding protein Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.84 E-value=1e-21 Score=132.91 Aligned_cols=75 Identities=20% Similarity=0.449 Sum_probs=72.1
Q ss_pred EEEEcCCCCCCcHHHHHHHhccCCCeeEEEEEecCCCCCcceEEEEEecCHHHHHHHHHHhCCceeCCEeEEEEEc
Q 025814 140 RLFCGDLGNEVNDDVLSKAFSRFPSFNMAKVVRDKRTGKTKGYGFISFANPSDIAAALKEMNGKYVGNRPIKLRKS 215 (247)
Q Consensus 140 ~lfV~nLp~~~~e~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~~FV~f~~~~~a~~Al~~l~g~~i~g~~l~V~~a 215 (247)
+|||+|||+++++++|+++|+.||.|..+.++.++.+|.++|||||+|.+.++|++|++ |||..|+|+.|+|++|
T Consensus 1 rlfV~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~~~afV~F~~~~~a~~al~-~~~~~l~gr~i~V~~A 75 (75)
T d2msta_ 1 KIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE-IHFHEINNKMVECKKA 75 (75)
T ss_dssp CEEEECCCSSCCHHHHHHHHHTTSCCSEECCBCCTTCTTSCCEEEEECSCHHHHHHHHH-CSSCCBTTBCCEEEEC
T ss_pred CEEEeCCCCCCCHHHHHHHHHHhCCcceeeeeeeccccccCceeEEEECCHHHHHHHHh-cCCCEECCeEEEEEEC
Confidence 49999999999999999999999999999999999999999999999999999999995 9999999999999875
No 41
>d1fjeb1 d.58.7.1 (B:1-91) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=99.83 E-value=6.4e-22 Score=139.01 Aligned_cols=82 Identities=32% Similarity=0.455 Sum_probs=75.4
Q ss_pred CCCCcEEEEcCCCCCCcHHHHHHHhccCCCeeEEEEEecCCCCCcceEEEEEecCHHHHHHHHHHhCCceeCCEeEEEEE
Q 025814 135 PENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMAKVVRDKRTGKTKGYGFISFANPSDIAAALKEMNGKYVGNRPIKLRK 214 (247)
Q Consensus 135 ~~~~~~lfV~nLp~~~~e~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~~FV~f~~~~~a~~Al~~l~g~~i~g~~l~V~~ 214 (247)
....++|||+|||+++++++|+++|+.||.|.++.|+.+ .+|+++|||||+|.+.++|++|| .|||..|+|+.|+|++
T Consensus 10 ~~~~~~ifV~nL~~~~te~~l~~~F~~~G~i~~~~v~~~-~~g~~kg~afv~F~~~e~a~~Al-~~~g~~~~g~~i~V~~ 87 (91)
T d1fjeb1 10 STTPFNLFIGNLNPNKSVAELKVAISELFAKNDLAVVDV-RTGTNRKFGYVDFESAEDLEKAL-ELTGLKVFGNEIKLEK 87 (91)
T ss_dssp CSSSEEEEEECCCTTSCHHHHHHHHHHHHHHHTCCCCEE-EEETTTTEEEEEESSHHHHHHHH-HGGGEEETTEEEEEEC
T ss_pred CCCCcEEEEeCccCcchHHHHHHHHhcCCcEEEeeeeec-CCCCccEEeEEeeCCHHHHHHHH-hcCCcEECCEEEEEEe
Confidence 445679999999999999999999999999999888765 58999999999999999999999 5999999999999999
Q ss_pred cccc
Q 025814 215 SKWQ 218 (247)
Q Consensus 215 a~~k 218 (247)
+++|
T Consensus 88 ak~k 91 (91)
T d1fjeb1 88 PKGR 91 (91)
T ss_dssp CCCS
T ss_pred cCCC
Confidence 8764
No 42
>d2cpxa1 d.58.7.1 (A:291-392) RNA-binding protein 41, RBM41 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.83 E-value=6.7e-22 Score=141.83 Aligned_cols=85 Identities=24% Similarity=0.303 Sum_probs=79.6
Q ss_pred CCCcEEEEcCCCCCCcHHHHHHHhccCCCeeEEEEEecCCCCCcceEEEEEecCHHHHHHHHHHhCCceeCCEeEEEEEc
Q 025814 136 ENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMAKVVRDKRTGKTKGYGFISFANPSDIAAALKEMNGKYVGNRPIKLRKS 215 (247)
Q Consensus 136 ~~~~~lfV~nLp~~~~e~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~~FV~f~~~~~a~~Al~~l~g~~i~g~~l~V~~a 215 (247)
.+.++|||+|||.++++++|+++|+.||.|..+.++.+..+|.++|||||+|.+.++|.+|++.|||..|+|+.|+|+++
T Consensus 16 ~ps~tl~V~nLp~~~t~~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~~fV~f~~~~~A~~Ai~~l~g~~~~g~~l~V~~a 95 (102)
T d2cpxa1 16 EPNKVLYLKNLSPRVTERDLVSLFARFQEKKGPPIQFRMMTGRMRGQAFITFPNKEIAWQALHLVNGYKLYGKILVIEFG 95 (102)
T ss_dssp SCCSEEEEECCCTTCCHHHHHHHTHHHHHSSSSCCEEEEECSSSCSEEEEECSSHHHHHHHHHHSTTCBCSSCBCEEEEC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHhhccceeeEEeecccccccccccceEEeccHHHHHHHHHHhCCCEECCEEEEEEeC
Confidence 34679999999999999999999999999999999988889999999999999999999999999999999999999999
Q ss_pred ccccc
Q 025814 216 KWQER 220 (247)
Q Consensus 216 ~~k~~ 220 (247)
+.+..
T Consensus 96 k~k~~ 100 (102)
T d2cpxa1 96 KNKKQ 100 (102)
T ss_dssp CCCSC
T ss_pred CCccc
Confidence 87653
No 43
>d1x4aa1 d.58.7.1 (A:9-103) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.83 E-value=1.7e-20 Score=132.75 Aligned_cols=81 Identities=15% Similarity=0.339 Sum_probs=73.8
Q ss_pred CCCCcEEEEcCCCCCCcHHHHHHHhccCCCeeEEEEEecCCCCCcceEEEEEecCHHHHHHHHHHhCCceeCCEeEEEEE
Q 025814 135 PENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMAKVVRDKRTGKTKGYGFISFANPSDIAAALKEMNGKYVGNRPIKLRK 214 (247)
Q Consensus 135 ~~~~~~lfV~nLp~~~~e~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~~FV~f~~~~~a~~Al~~l~g~~i~g~~l~V~~ 214 (247)
..+.++|||+|||+++++++|+++|+.||.|..+.+..+ +..+|||||+|.+.++|+.||+.|||..|+|+.|+|++
T Consensus 11 ~~~~~~l~V~nLp~~~t~~~l~~~F~~~G~v~~~~~~~~---~~~~g~afV~f~~~e~a~~Ai~~l~g~~~~g~~l~V~~ 87 (95)
T d1x4aa1 11 GNNDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNR---RGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEF 87 (95)
T ss_dssp CCCSSEEEEESCCTTCCHHHHHHHHGGGSCEEEEEECCS---SSSSCCEEEEESCHHHHHHHHHHHTTCEETTEECEEEC
T ss_pred CCCCCEEEEECCCCCCCHHHHHHHHhcCCceEEEEeccc---ccccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEe
Confidence 456678999999999999999999999999999887654 56789999999999999999999999999999999999
Q ss_pred cccc
Q 025814 215 SKWQ 218 (247)
Q Consensus 215 a~~k 218 (247)
++..
T Consensus 88 a~~~ 91 (95)
T d1x4aa1 88 PRSG 91 (95)
T ss_dssp CCCC
T ss_pred ccCC
Confidence 8753
No 44
>d1x4ga1 d.58.7.1 (A:8-103) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.83 E-value=1.1e-20 Score=133.82 Aligned_cols=77 Identities=23% Similarity=0.494 Sum_probs=71.7
Q ss_pred CCCcEEEEcCCCCCCcHHHHHHHhccCCCeeEEEEEecCCCCCcceEEEEEecCHHHHHHHHHHhCCceeCCEeEEEEEc
Q 025814 136 ENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMAKVVRDKRTGKTKGYGFISFANPSDIAAALKEMNGKYVGNRPIKLRKS 215 (247)
Q Consensus 136 ~~~~~lfV~nLp~~~~e~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~~FV~f~~~~~a~~Al~~l~g~~i~g~~l~V~~a 215 (247)
+..++|||+|||.++++++|+++|++||.|.+|+++++ +|||||+|.+.++|.+|+..|||..|+|+.|+|.|+
T Consensus 16 ~~~~~l~v~nL~~~~te~~L~~~F~~fG~i~~v~i~~~------kg~afV~f~~~~~A~~Ai~~l~~~~i~g~~l~v~~a 89 (96)
T d1x4ga1 16 PKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWG 89 (96)
T ss_dssp SSCCEEEEECCSSCCCHHHHHHHHHHHSCEEEEEEETT------TTEEEEEESSHHHHHHHHHHHTTCEETTEECEEECC
T ss_pred CCCCEEEEcCCCCCCCHHHHHHHHHHhCCceEEEEEec------ceEEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEc
Confidence 34468999999999999999999999999999999876 689999999999999999999999999999999998
Q ss_pred ccc
Q 025814 216 KWQ 218 (247)
Q Consensus 216 ~~k 218 (247)
+.+
T Consensus 90 k~~ 92 (96)
T d1x4ga1 90 KES 92 (96)
T ss_dssp CCC
T ss_pred CCC
Confidence 754
No 45
>d1x5oa1 d.58.7.1 (A:8-108) RNA-binding motif, single-stranded-interacting protein 1, RBMS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.83 E-value=1.1e-20 Score=135.13 Aligned_cols=81 Identities=19% Similarity=0.399 Sum_probs=75.1
Q ss_pred CCCcEEEEcCCCCCCcHHHHHHHhccCCCeeEEEEEecCCCCCcceEEEEEecCHHHHHHHHHHhCCceeCCEeEEEEEc
Q 025814 136 ENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMAKVVRDKRTGKTKGYGFISFANPSDIAAALKEMNGKYVGNRPIKLRKS 215 (247)
Q Consensus 136 ~~~~~lfV~nLp~~~~e~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~~FV~f~~~~~a~~Al~~l~g~~i~g~~l~V~~a 215 (247)
.+.++|||+|||+++++++|+++|+.||.|..+.+..+ .++.++|||||+|.+.++|.+|++.|||..|.|+.+.|..+
T Consensus 16 ~~~~~lfV~nLp~~~te~~L~~~F~~~G~i~~~~~~~~-~~~~~~g~afV~f~~~~~A~~Ai~~lng~~i~gr~~~v~~~ 94 (101)
T d1x5oa1 16 QDPTNLYISNLPLSMDEQELENMLKPFGQVISTRILRD-SSGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPT 94 (101)
T ss_dssp CCTTEEEEESCCTTCCHHHHHHTTTTTSCEEEEEEEEC-SSSCEEEEEEEEESCHHHHHHHHHHHBTCCCCCCTTSCCCS
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHhhcccccceeeecc-cccccccceeEEeCCHHHHHHHHHHhCCCEECCcCCccCCC
Confidence 34568999999999999999999999999999999988 48999999999999999999999999999999999998776
Q ss_pred cc
Q 025814 216 KW 217 (247)
Q Consensus 216 ~~ 217 (247)
++
T Consensus 95 ~P 96 (101)
T d1x5oa1 95 EP 96 (101)
T ss_dssp SC
T ss_pred CC
Confidence 54
No 46
>d1zh5a2 d.58.7.1 (A:105-189) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82 E-value=3e-20 Score=128.68 Aligned_cols=76 Identities=11% Similarity=0.076 Sum_probs=71.5
Q ss_pred cEEEEcCCCCCCcHHHHHHHhccCCCeeEEEEEecCCCCCcceEEEEEecCHHHHHHHHHHhCCceeCCEeEEEEEcc
Q 025814 139 YRLFCGDLGNEVNDDVLSKAFSRFPSFNMAKVVRDKRTGKTKGYGFISFANPSDIAAALKEMNGKYVGNRPIKLRKSK 216 (247)
Q Consensus 139 ~~lfV~nLp~~~~e~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~~FV~f~~~~~a~~Al~~l~g~~i~g~~l~V~~a~ 216 (247)
++|||+|||.++++++|+++|+.||.|.+|.+.++. +|.++|||||+|.+.++|++|| .++|..++|+.|.|.+++
T Consensus 7 rtvfV~nlp~~~te~~l~~~F~~~G~v~~v~l~~~~-~~~~kG~afV~f~~~e~a~~al-~~~~~~~~g~~l~v~~~~ 82 (85)
T d1zh5a2 7 RSVYIKGFPTDATLDDIKEWLEDKGQVLNIQMRRTL-HKAFKGSIFVVFDSIESAKKFV-ETPGQKYKETDLLILFKD 82 (85)
T ss_dssp TEEEEECCCTTCCHHHHHHHHTTSCCEEEEEEEECT-TCCEEEEEEEEESCHHHHHHHH-TCCCCEETTEECEEEEGG
T ss_pred CEEEEECCCCCCCHHHHHHHHHHhcccccceeeeec-cCCcceEEEEEEcCHHHHHHHH-HHCCCEECCEEEEEEEcC
Confidence 489999999999999999999999999999998885 8999999999999999999999 589999999999998753
No 47
>d1x4ea1 d.58.7.1 (A:8-79) RNA-binding motif, single-stranded-interacting protein 2, RBMS2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82 E-value=3.9e-21 Score=129.02 Aligned_cols=71 Identities=30% Similarity=0.437 Sum_probs=69.0
Q ss_pred EEEcCCCCCCcHHHHHHHhccCCCeeEEEEEecCCCCCcceEEEEEecCHHHHHHHHHHhCCceeCCEeEE
Q 025814 141 LFCGDLGNEVNDDVLSKAFSRFPSFNMAKVVRDKRTGKTKGYGFISFANPSDIAAALKEMNGKYVGNRPIK 211 (247)
Q Consensus 141 lfV~nLp~~~~e~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~~FV~f~~~~~a~~Al~~l~g~~i~g~~l~ 211 (247)
|||+|||+++++++|+++|+.||.|..+++.+++.++.++|||||+|.+.++|++|+..|||..|+|+.|+
T Consensus 1 lyV~nLp~~~te~~l~~~F~~~G~v~~~~~~~~~~~~~~~g~afV~f~~~~~A~~Ai~~lng~~~~Gr~~k 71 (72)
T d1x4ea1 1 LYIRGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVTALKASGVQAQMAK 71 (72)
T ss_dssp EEEESCCTTCCHHHHHTTSTTTSCEEEEEEECCSSSCSCCSEEEEEESCHHHHHHHHHHHHHHTCCEESCC
T ss_pred CEEeCCCCcCCHHHHHHHHhhhccccccccccccccccccceeEEEECCHHHHHHHHHHhCCCEECCEECc
Confidence 79999999999999999999999999999999999999999999999999999999999999999999874
No 48
>d1fjca_ d.58.7.1 (A:) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=99.82 E-value=1.9e-20 Score=132.73 Aligned_cols=82 Identities=21% Similarity=0.351 Sum_probs=73.6
Q ss_pred CCCCCcEEEEcCCCCCCcHHHHHHHhccCCCeeEEEEEecCCCCCcceEEEEEecCHHHHHHHHHHhCCceeCCEeEEEE
Q 025814 134 WPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMAKVVRDKRTGKTKGYGFISFANPSDIAAALKEMNGKYVGNRPIKLR 213 (247)
Q Consensus 134 ~~~~~~~lfV~nLp~~~~e~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~~FV~f~~~~~a~~Al~~l~g~~i~g~~l~V~ 213 (247)
...+.++|||+|||+++++++|+++|+.||.|..+. .+|.++|||||+|.+.++|++|++.|||..|+|+.|+|.
T Consensus 12 ~~~~~~~l~V~nL~~~~te~~l~~~F~~~g~v~~~~-----~~~~~~~~afV~f~~~~~A~~A~~~l~~~~~~gr~i~V~ 86 (96)
T d1fjca_ 12 KVRAARTLLAKNLSFNITEDELKEVFEDALEIRLVS-----QDGKSKGIAYIEFKSEADAEKNLEEKQGAEIDGRSVSLY 86 (96)
T ss_dssp TTTGGGEEEEESCCSSCCHHHHHHHHCSEEEECCEE-----ETTEEEEEEEEEESSHHHHHHHHHHTTEEEETTEEEEEE
T ss_pred cCCCCCEEEEeCCCCCCCHHHHHHHHHhcccceeee-----ecCccccEEEEEeCCHHHHHHHHHHcCCCEECCEEEEEE
Confidence 355667999999999999999999999999876553 268899999999999999999999999999999999999
Q ss_pred Ecccccc
Q 025814 214 KSKWQER 220 (247)
Q Consensus 214 ~a~~k~~ 220 (247)
++.++..
T Consensus 87 ~a~~k~~ 93 (96)
T d1fjca_ 87 YTGEKGG 93 (96)
T ss_dssp ECSSSCC
T ss_pred EeCCCCC
Confidence 9987653
No 49
>d2cpia1 d.58.7.1 (A:101-189) E3 ubiquitin protein ligase CNOT4 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.82 E-value=1.4e-20 Score=131.46 Aligned_cols=76 Identities=14% Similarity=0.284 Sum_probs=69.8
Q ss_pred CcEEEEcCCCCCCcHHHH---HHHhccCCCeeEEEEEecCCCCCc---ceEEEEEecCHHHHHHHHHHhCCceeCCEeEE
Q 025814 138 DYRLFCGDLGNEVNDDVL---SKAFSRFPSFNMAKVVRDKRTGKT---KGYGFISFANPSDIAAALKEMNGKYVGNRPIK 211 (247)
Q Consensus 138 ~~~lfV~nLp~~~~e~~L---~~~F~~~G~i~~v~i~~~~~tg~~---kg~~FV~f~~~~~a~~Al~~l~g~~i~g~~l~ 211 (247)
.++|||+|||+++++++| .++|++||.|.+|.+++++.++.. +|||||+|.+.++|.+|++.|||..++|+.|+
T Consensus 8 ~n~vyV~nLp~~~t~~~l~~~~e~F~~~G~I~~v~i~~~~~~~~~~~~~g~aFV~f~~~~~A~~Ai~~lng~~~~gr~lk 87 (89)
T d2cpia1 8 KNLVFVVGLSQRLADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVVVDGRTLK 87 (89)
T ss_dssp SSCEEEEEECTTTCCHHHHHSTTTTTTTSCEEEEEEECCSSCCSSSCCCEEEEEEESSHHHHHHHHHHHTTEEETTEEEE
T ss_pred cCEEEEECCCCccCHHHHHHHHHHhcccCCceEEEEeeccCcCCCCCcceEEEEecccchhHHHHHHHhCCCEECCEEEE
Confidence 347999999999999999 678999999999999999877655 49999999999999999999999999999999
Q ss_pred EE
Q 025814 212 LR 213 (247)
Q Consensus 212 V~ 213 (247)
|+
T Consensus 88 vS 89 (89)
T d2cpia1 88 AS 89 (89)
T ss_dssp EE
T ss_pred EC
Confidence 84
No 50
>d2disa1 d.58.7.1 (A:8-103) Hypothetical protein FLJ20273 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.81 E-value=1.4e-20 Score=133.40 Aligned_cols=83 Identities=13% Similarity=0.196 Sum_probs=74.6
Q ss_pred cEEEEcCCCCCCcHHHHHHHhccCCC-eeEEEEEecC-CCCCcceEEEEEecCHHHHHHHHHHhCCc--eeCCEeEEEEE
Q 025814 139 YRLFCGDLGNEVNDDVLSKAFSRFPS-FNMAKVVRDK-RTGKTKGYGFISFANPSDIAAALKEMNGK--YVGNRPIKLRK 214 (247)
Q Consensus 139 ~~lfV~nLp~~~~e~~L~~~F~~~G~-i~~v~i~~~~-~tg~~kg~~FV~f~~~~~a~~Al~~l~g~--~i~g~~l~V~~ 214 (247)
|+|||+|||.++++++|+++|+.||. |.++.++++. .+|.++|||||+|.+.++|..|++.|++. .++|+.|+|.+
T Consensus 2 ~rLyV~nLp~~~te~~l~~~f~~~g~~i~~v~~~~~~~~~~~~rg~aFV~F~~~~~A~~Ai~~l~~~~~~~~g~~i~V~~ 81 (96)
T d2disa1 2 CRLFIGGIPKMKKREEILEEIAKVTEGVLDVIVYASAADKMKNRGFAFVEYESHRAAAMARRKLMPGRIQLWGHQIAVDW 81 (96)
T ss_dssp EEEEEECCCTTSCHHHHHHHHHHHSTTEEEEECCSSSCTTTTTCCEEEEEESSHHHHHHHHTTTTTCCSCBTTBCCEEEE
T ss_pred CEEEEcCCCCcCCHHHHHHHHHHhCCcceEEEEeeeccccccCCCeEEEEEcCHHHHHHHHHHHcCCCeEECCEEEEEEE
Confidence 68999999999999999999999996 8999999885 46899999999999999999999998654 66899999999
Q ss_pred ccccccc
Q 025814 215 SKWQERT 221 (247)
Q Consensus 215 a~~k~~~ 221 (247)
|+++...
T Consensus 82 A~p~~~~ 88 (96)
T d2disa1 82 AEPEIDV 88 (96)
T ss_dssp SCSSCST
T ss_pred cCCCCCC
Confidence 9876543
No 51
>d1wi8a_ d.58.7.1 (A:) Eukaryotic translation initiation factor 4B {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.81 E-value=4.4e-20 Score=132.68 Aligned_cols=81 Identities=21% Similarity=0.498 Sum_probs=72.6
Q ss_pred CCcEEEEcCCCCCCcHHHHHHHhccCCCeeEEEEEecC-CCCCcceEEEEEecCHHHHHHHHHHhCCceeCCEeEEEEEc
Q 025814 137 NDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMAKVVRDK-RTGKTKGYGFISFANPSDIAAALKEMNGKYVGNRPIKLRKS 215 (247)
Q Consensus 137 ~~~~lfV~nLp~~~~e~~L~~~F~~~G~i~~v~i~~~~-~tg~~kg~~FV~f~~~~~a~~Al~~l~g~~i~g~~l~V~~a 215 (247)
+.++|||+|||+++++++|+++|+.|| |.++.++.+. .+|.++|||||+|.+.++|++|+ .|||..|+|+.|+|+++
T Consensus 14 p~~~v~V~nLp~~~te~~l~~~f~~~g-~~~~~~~~~~~~~g~~~g~afV~f~~~e~a~~~~-~~~~~~~~gr~l~V~~a 91 (104)
T d1wi8a_ 14 PPYTAFLGNLPYDVTEESIKEFFRGLN-ISAVRLPREPSNPERLKGFGYAEFEDLDSLLSAL-SLNEESLGNKRIRVDVA 91 (104)
T ss_dssp SCEEEEEESCCSSCCHHHHHHHTTTSC-EEEEECCBCSSCTTSBCSCEEEEESSHHHHHHHH-GGGTCEETTEECEEEEC
T ss_pred CCCEEEEeCCCCcCCHHHHHHHHHHhc-cccceeeeeeccCCCcceeeeEEECCHHHHHHHH-HcCCCEECCEEEEEEEC
Confidence 457999999999999999999999999 7788877765 57899999999999999998777 69999999999999998
Q ss_pred cccc
Q 025814 216 KWQE 219 (247)
Q Consensus 216 ~~k~ 219 (247)
..+.
T Consensus 92 ~~~~ 95 (104)
T d1wi8a_ 92 DQAQ 95 (104)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 7654
No 52
>d2cqpa1 d.58.7.1 (A:917-1002) RNA-binding protein 12 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.81 E-value=3.4e-20 Score=128.64 Aligned_cols=80 Identities=16% Similarity=0.265 Sum_probs=71.2
Q ss_pred CCCcEEEEcCCCCCCcHHHHHHHhccCCCeeEEEEEecCCCCCcceEEEEEecCHHHHHHHHHHhCCceeCCEeEEEEEc
Q 025814 136 ENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMAKVVRDKRTGKTKGYGFISFANPSDIAAALKEMNGKYVGNRPIKLRKS 215 (247)
Q Consensus 136 ~~~~~lfV~nLp~~~~e~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~~FV~f~~~~~a~~Al~~l~g~~i~g~~l~V~~a 215 (247)
+...+|||+|||+++++++|+++|+.||.+....++.+..+|.++|||||+|.+.++|++|++.|||..|+||.|+|.++
T Consensus 7 p~~~~l~v~nLp~~~~~~di~~~F~~~~~~~~~~~~~~~~~g~~~G~afV~f~~~e~a~~Ai~~l~~~~l~gr~i~v~l~ 86 (86)
T d2cqpa1 7 PGPTIIKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVIDLNDRPIGSRKVKLVLG 86 (86)
T ss_dssp CSSEEEEEESCCTTCCHHHHHHHTTTSCCCTTTCEEEECSSSCEEEEEEEEESCHHHHHHHHHHTTTCEETTEECEEEES
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHhhcccceeEEEEEeCCCCCcceEEEEEEcCcHHHHHHHHHcCCCEECCEEEEEEEC
Confidence 34567999999999999999999999999976433444468999999999999999999999999999999999999874
No 53
>d2cpda1 d.58.7.1 (A:223-308) APOBEC1 stimulating protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.81 E-value=1e-19 Score=126.17 Aligned_cols=78 Identities=24% Similarity=0.447 Sum_probs=71.2
Q ss_pred CcEEEEcCCCCCCcHHHHHHHhccCCCeeEEEEEecCCCCCcceEEEEEecCHHHHHHHHHHhCCceeCCEeEEEEEccc
Q 025814 138 DYRLFCGDLGNEVNDDVLSKAFSRFPSFNMAKVVRDKRTGKTKGYGFISFANPSDIAAALKEMNGKYVGNRPIKLRKSKW 217 (247)
Q Consensus 138 ~~~lfV~nLp~~~~e~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~~FV~f~~~~~a~~Al~~l~g~~i~g~~l~V~~a~~ 217 (247)
.++|||+|||+++++++|+++|+.||.|..+.+. .++|||||+|.+.++|.+|+..|||..|+|+.|+|+++++
T Consensus 8 ~k~l~V~nLp~~~te~~l~~~F~~~g~i~~~~~~------~~rg~afV~f~~~~~A~~Ai~~l~~~~i~g~~i~V~~akP 81 (86)
T d2cpda1 8 VKILYVRNLMLSTSEEMIEKEFNNIKPGAVERVK------KIRDYAFVHFSNREDAVEAMKALNGKVLDGSPIEVTLAKP 81 (86)
T ss_dssp CCEEEEESCCTTCCHHHHHHHHHTTSTTCEEEEE------ECSSEEEEEESSHHHHHHHHHHHSSEEETTEEEEEECCCC
T ss_pred CCEEEEcCCCCCCCHHHHHHhhcccceeeeEEEc------cccEEEEEEeCCHHHHHHHHHHcCCCEECCEEEEEEeccC
Confidence 3589999999999999999999999999887764 3478999999999999999999999999999999999998
Q ss_pred cccc
Q 025814 218 QERT 221 (247)
Q Consensus 218 k~~~ 221 (247)
+.+.
T Consensus 82 ~~~~ 85 (86)
T d2cpda1 82 VDKD 85 (86)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 7654
No 54
>d2cpja1 d.58.7.1 (A:65-150) Non-POU domain-containing octamer-binding protein, NonO {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.81 E-value=5.3e-20 Score=127.68 Aligned_cols=77 Identities=21% Similarity=0.420 Sum_probs=71.3
Q ss_pred CCcEEEEcCCCCCCcHHHHHHHhccCCCeeEEEEEecCCCCCcceEEEEEecCHHHHHHHHHHhCCceeCCEeEEEEEcc
Q 025814 137 NDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMAKVVRDKRTGKTKGYGFISFANPSDIAAALKEMNGKYVGNRPIKLRKSK 216 (247)
Q Consensus 137 ~~~~lfV~nLp~~~~e~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~~FV~f~~~~~a~~Al~~l~g~~i~g~~l~V~~a~ 216 (247)
..++|||+|||.++++++|+++|++||.|.+|++.++ +|||||+|.+.++|++|++.|||..|+|+.|+|++|.
T Consensus 7 ~~~~l~V~nLp~~~~~~~l~~~F~~~G~i~~i~~~~~------k~~afV~f~~~~~A~~A~~~l~g~~i~g~~l~V~~A~ 80 (86)
T d2cpja1 7 QRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKD------KGFGFIRLETRTLAEIAKVELDNMPLRGKQLRVRFAC 80 (86)
T ss_dssp CTTEEEEESCCTTCCHHHHHHHTSTTCCCSEEEEETT------TTEEEEECSSSHHHHHHHHHHTTCCBTTBCCEEEESS
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHhCCceEeeeecc------cceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECC
Confidence 3458999999999999999999999999999999866 5799999999999999999999999999999999987
Q ss_pred ccc
Q 025814 217 WQE 219 (247)
Q Consensus 217 ~k~ 219 (247)
.+.
T Consensus 81 ~~~ 83 (86)
T d2cpja1 81 HSA 83 (86)
T ss_dssp CCS
T ss_pred CcC
Confidence 653
No 55
>d2b0ga1 d.58.7.1 (A:1-83) Splicesomal U1A protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.80 E-value=8.5e-20 Score=125.82 Aligned_cols=77 Identities=25% Similarity=0.437 Sum_probs=69.9
Q ss_pred CCCCcEEEEcCCCCCCcHHHHHHHhccCCCeeEEEEEecCCCCCcceEEEEEecCHHHHHHHHHHhCCcee-CCEeEEEE
Q 025814 135 PENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMAKVVRDKRTGKTKGYGFISFANPSDIAAALKEMNGKYV-GNRPIKLR 213 (247)
Q Consensus 135 ~~~~~~lfV~nLp~~~~e~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~~FV~f~~~~~a~~Al~~l~g~~i-~g~~l~V~ 213 (247)
.++.++|||+|||.++++++|.++|+.||.|.+|++++++ +|||||+|.+.++|..|++.|||..| +|+.|+|+
T Consensus 5 ~pP~~tl~V~nLp~~~t~~~l~~~f~~~G~i~~v~~~~~~-----~g~afV~f~~~~~A~~A~~~l~g~~~~~~~~i~v~ 79 (83)
T d2b0ga1 5 QPPNQILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVPNR-----HDIAFVEFTTELQSNAAKEALQGFKITPTHAMKIT 79 (83)
T ss_dssp CSCCSEEEEESCCTTCCHHHHHHHHTTSTTEEEEEECTTT-----CSCEEEEESSHHHHHHHHHHHTTCBSSTTCBCEEE
T ss_pred CCCCCEEEEECCCCCCCHHHHHhhhccCccEEEeeeeccc-----ceeEEEecCCHHHHHHHHHHhCCcEeCCCcEEEEE
Confidence 3446799999999999999999999999999999997653 68999999999999999999999988 57899999
Q ss_pred Ecc
Q 025814 214 KSK 216 (247)
Q Consensus 214 ~a~ 216 (247)
+|+
T Consensus 80 ~ak 82 (83)
T d2b0ga1 80 FAK 82 (83)
T ss_dssp ECC
T ss_pred Eec
Confidence 986
No 56
>d2cqha1 d.58.7.1 (A:2-81) IGF-II mRNA-binding protein 2 isoform A {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.80 E-value=2.5e-20 Score=127.63 Aligned_cols=75 Identities=20% Similarity=0.344 Sum_probs=68.3
Q ss_pred EEEEcCCCCCCcHHHHHHHhccCCCeeEEEEEecCCCCCcceEEEEEecCHHHHHHHHHHhCCc-eeCCEeEEEEEcccc
Q 025814 140 RLFCGDLGNEVNDDVLSKAFSRFPSFNMAKVVRDKRTGKTKGYGFISFANPSDIAAALKEMNGK-YVGNRPIKLRKSKWQ 218 (247)
Q Consensus 140 ~lfV~nLp~~~~e~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~~FV~f~~~~~a~~Al~~l~g~-~i~g~~l~V~~a~~k 218 (247)
+|||+|||.++++++|+++|++||.|.++.+... +|||||+|.+.++|.+|++.|||. .|+|+.|+|+++.++
T Consensus 3 ~l~V~nLp~~~te~~L~~~F~~~G~i~~~~~~~~------rg~aFV~f~~~~~A~~Ai~~lng~~~~~G~~i~V~~a~~k 76 (80)
T d2cqha1 3 KLYIGNLSPAVTADDLRQLFGDRKLPLAGQVLLK------SGYAFVDYPDQNWAIRAIETLSGKVELHGKIMEVDYSVSK 76 (80)
T ss_dssp CEEEECCCTTCCHHHHHHHHHHTTCCCSSCEEEE------TTEEEECCSCHHHHHHHHHHHTTTCEETTEECEEEECCCC
T ss_pred EEEEECCCCCCCHHHHHHHHHHhCcEEEeEEecc------cceEEEEECCHHHHHHHHHHhCCCeEECCEEEEEEEcCCc
Confidence 6999999999999999999999999987766554 689999999999999999999996 699999999999876
Q ss_pred cc
Q 025814 219 ER 220 (247)
Q Consensus 219 ~~ 220 (247)
..
T Consensus 77 ~~ 78 (80)
T d2cqha1 77 KL 78 (80)
T ss_dssp CC
T ss_pred Cc
Confidence 53
No 57
>d1wf2a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoproteins C1/C2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.80 E-value=1.3e-19 Score=128.71 Aligned_cols=75 Identities=20% Similarity=0.403 Sum_probs=67.9
Q ss_pred CCCcEEEEcCCC-CCCcHHHHHHHhccCCCeeEEEEEecCCCCCcceEEEEEecCHHHHHHHHHHhCCceeCCEeEEEEE
Q 025814 136 ENDYRLFCGDLG-NEVNDDVLSKAFSRFPSFNMAKVVRDKRTGKTKGYGFISFANPSDIAAALKEMNGKYVGNRPIKLRK 214 (247)
Q Consensus 136 ~~~~~lfV~nLp-~~~~e~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~~FV~f~~~~~a~~Al~~l~g~~i~g~~l~V~~ 214 (247)
...++|||+||+ ..+++++|+++|++||.|.+|+| ++|||||+|.+.++|++||+.|||..|+|+.|+|++
T Consensus 13 ~~~~~lfV~nL~~~~~~~~~L~~~F~~~G~i~~~~i--------~rg~aFV~f~~~~~A~~Ai~~lng~~~~g~~l~V~~ 84 (98)
T d1wf2a_ 13 SMNSRVFIGNLNTLVVKKSDVEAIFSKYGKIVGCSV--------HKGFAFVQYVNERNARAAVAGEDGRMIAGQVLDINL 84 (98)
T ss_dssp SCCCCEEEEEECTTTCCHHHHHHSSTTSSCEEEEEE--------ETEEEEEEESSHHHHHHHHHTTTTCEETTEECEEEE
T ss_pred CCCcEEEEeCCCcccCCHHHHHHHHhhcCCEEEEEE--------eCCeEEEEECCHHHHHHHHHHcCCCEECCEEEEEEE
Confidence 345589999997 57889999999999999999988 368999999999999999999999999999999999
Q ss_pred cccc
Q 025814 215 SKWQ 218 (247)
Q Consensus 215 a~~k 218 (247)
++.+
T Consensus 85 a~~~ 88 (98)
T d1wf2a_ 85 AAEP 88 (98)
T ss_dssp TTSC
T ss_pred CCCC
Confidence 8754
No 58
>d2bz2a1 d.58.7.1 (A:35-113) Negative elongation factor E, NELF-E {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.80 E-value=6.4e-20 Score=125.26 Aligned_cols=76 Identities=20% Similarity=0.312 Sum_probs=69.1
Q ss_pred CCCCcEEEEcCCCCCCcHHHHHHHhccCCCeeEEEEEecCCCCCcceEEEEEecCHHHHHHHHHHhCCceeCCEeEEEEE
Q 025814 135 PENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMAKVVRDKRTGKTKGYGFISFANPSDIAAALKEMNGKYVGNRPIKLRK 214 (247)
Q Consensus 135 ~~~~~~lfV~nLp~~~~e~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~~FV~f~~~~~a~~Al~~l~g~~i~g~~l~V~~ 214 (247)
+..+++|||+||+ +++++|+++|++||.|.++.+.++ +|||||+|.+.++|..|++.|||..|+|+.|+|++
T Consensus 2 p~~~~ti~V~~~~--~te~~L~~~F~~~G~I~~v~~~~~------~~~afV~f~~~~~A~~Ai~~lng~~~~g~~l~V~~ 73 (79)
T d2bz2a1 2 PRKGNTLYVYGED--MTPTLLRGAFSPFGNIIDLSMDPP------RNCAFVTYEKMESADQAVAELNGTQVESVQLKVNI 73 (79)
T ss_dssp CCCCCEEEEECSS--CCHHHHHHHHSTTCCCSCEEEETT------TTEEEEECSSHHHHHHHHHHHTTCBCSSCBCEEEE
T ss_pred CCCCCEEEEECCC--CCHHHHHHHHhccCccceeeeccC------CCEEEEEEcccHHHHHHHHHhCCCEECCEEEEEEE
Confidence 3456699999985 899999999999999999998755 57999999999999999999999999999999999
Q ss_pred cccc
Q 025814 215 SKWQ 218 (247)
Q Consensus 215 a~~k 218 (247)
++.+
T Consensus 74 a~~~ 77 (79)
T d2bz2a1 74 ARKQ 77 (79)
T ss_dssp CCSS
T ss_pred ecCC
Confidence 9754
No 59
>d2ghpa2 d.58.7.1 (A:41-115) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.80 E-value=1.5e-19 Score=122.07 Aligned_cols=73 Identities=21% Similarity=0.237 Sum_probs=67.7
Q ss_pred EEEEcCCCCCCcHHHHHHHhccCCCeeEEEEEecCCCCCcceEEEEEecCHHHHHHHHHHhCCceeCCEeEEEEEc
Q 025814 140 RLFCGDLGNEVNDDVLSKAFSRFPSFNMAKVVRDKRTGKTKGYGFISFANPSDIAAALKEMNGKYVGNRPIKLRKS 215 (247)
Q Consensus 140 ~lfV~nLp~~~~e~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~~FV~f~~~~~a~~Al~~l~g~~i~g~~l~V~~a 215 (247)
+|||+|||+++++++|+++|+.||.|.++++..++. ..+|||||+|.+.++|.+|| .|||..|+|+.|.|+.+
T Consensus 2 tv~V~nlp~~~t~~~l~~~F~~~G~I~~v~~~~~~~--~~~~~afV~F~~~~~a~~Al-~~~~~~i~g~~i~V~~~ 74 (75)
T d2ghpa2 2 TVLVKNLPKSYNQNKVYKYFKHCGPIIHVDVADSLK--KNFRFARIEFARYDGALAAI-TKTHKVVGQNEIIVSHL 74 (75)
T ss_dssp EEEEEEECTTCCHHHHHHHHGGGSCEEEEEEEECTT--SSSEEEEEEESSHHHHHHHH-TTTTCEETTEECEEEEC
T ss_pred EEEEECCCCCCCHHHHHHHHhcCCceEEEEEEeecc--ccceEEEEEEcchHHhHHHH-HhcCcEECCEEEEEEEC
Confidence 799999999999999999999999999999999863 34679999999999999999 68999999999999764
No 60
>d1whxa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.80 E-value=5.3e-20 Score=133.68 Aligned_cols=77 Identities=14% Similarity=0.184 Sum_probs=70.0
Q ss_pred CCcEEEEcCCCCCCcHHHHHHHhccCCCeeEEEEEecCCCCCcceEEEEEecCHHHHHHHHHHhCCceeCCEeEEEEEcc
Q 025814 137 NDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMAKVVRDKRTGKTKGYGFISFANPSDIAAALKEMNGKYVGNRPIKLRKSK 216 (247)
Q Consensus 137 ~~~~lfV~nLp~~~~e~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~~FV~f~~~~~a~~Al~~l~g~~i~g~~l~V~~a~ 216 (247)
..++|||+|||+++++++|+++|+.||.|..|.|. ..+|||||+|.+.++|.+|++.|||..|.|+.|+|+++.
T Consensus 9 ~~~~l~V~nLp~~~t~~~L~~~F~~fG~I~~v~l~------~~kg~afV~f~~~~~A~~A~~~lng~~~~gr~l~v~~a~ 82 (111)
T d1whxa_ 9 SKTVILAKNLPAGTLAAEIQETFSRFGSLGRVLLP------EGGITAIVEFLEPLEARKAFRHLAYSKFHHVPLYLEWAP 82 (111)
T ss_dssp EEEEEEEESCCTTCCHHHHHHHHHTTSCEEEEECC------SSSSCEEEEESCHHHHHHHHHHHTTCBSSSSBCEEEEEE
T ss_pred CCCEEEEECCCCCCCHHHHHhhhhccCCccEEEee------ccCceEEEEEcCHHHHHHHHHHHcCCccCCCeEEEEECC
Confidence 34689999999999999999999999999998874 347899999999999999999999999999999999986
Q ss_pred ccc
Q 025814 217 WQE 219 (247)
Q Consensus 217 ~k~ 219 (247)
...
T Consensus 83 ~~~ 85 (111)
T d1whxa_ 83 IGV 85 (111)
T ss_dssp TTT
T ss_pred CCc
Confidence 543
No 61
>d1nu4a_ d.58.7.1 (A:) Splicesomal U1A protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.80 E-value=5.6e-20 Score=128.94 Aligned_cols=79 Identities=27% Similarity=0.442 Sum_probs=71.5
Q ss_pred CcEEEEcCCCCCCcHHHHHH----HhccCCCeeEEEEEecCCCCCcceEEEEEecCHHHHHHHHHHhCCceeCCEeEEEE
Q 025814 138 DYRLFCGDLGNEVNDDVLSK----AFSRFPSFNMAKVVRDKRTGKTKGYGFISFANPSDIAAALKEMNGKYVGNRPIKLR 213 (247)
Q Consensus 138 ~~~lfV~nLp~~~~e~~L~~----~F~~~G~i~~v~i~~~~~tg~~kg~~FV~f~~~~~a~~Al~~l~g~~i~g~~l~V~ 213 (247)
.++|||+|||+++++++|++ +|++||.|.+|++.. ++.++|||||+|.+.++|.+|++.|||..++|+.|+|+
T Consensus 3 ~~tl~V~nLp~~~t~~dl~~~l~~~f~~~G~i~~i~~~~---~~~~~g~afV~F~~~~~A~~A~~~~~~~~~~g~~l~v~ 79 (91)
T d1nu4a_ 3 NHTIYINNLNEKIKKDELKKSLHAIFSRFGQILDILVSR---SLKMRGQAFVIFKEVSSATNALRSMQGFPFYDKPMRIQ 79 (91)
T ss_dssp CSEEEEESCCTTSCHHHHHHHHHHHHGGGSCEEEEECCH---HHHHTTCEEEEESSHHHHHHHHHHHTTCEETTEECEEE
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHhcccccccceEEee---eccCCCceEEEECCHHHHHHHHHHhCCCEECCEEEEEE
Confidence 46999999999999999864 689999999988754 57889999999999999999999999999999999999
Q ss_pred Eccccc
Q 025814 214 KSKWQE 219 (247)
Q Consensus 214 ~a~~k~ 219 (247)
+++.+.
T Consensus 80 ~ak~~~ 85 (91)
T d1nu4a_ 80 YAKTDS 85 (91)
T ss_dssp ECSSCC
T ss_pred EeCCCc
Confidence 998654
No 62
>d2cpya1 d.58.7.1 (A:536-638) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.79 E-value=5.8e-20 Score=131.81 Aligned_cols=82 Identities=12% Similarity=0.104 Sum_probs=72.6
Q ss_pred CCCCcEEEEcCCCCCCcHHHHHHHhccCCCeeEEEEEecCCCCCcceEEEEEecCHHHHHHHHHHhCCceeCCEeEEEEE
Q 025814 135 PENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMAKVVRDKRTGKTKGYGFISFANPSDIAAALKEMNGKYVGNRPIKLRK 214 (247)
Q Consensus 135 ~~~~~~lfV~nLp~~~~e~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~~FV~f~~~~~a~~Al~~l~g~~i~g~~l~V~~ 214 (247)
.....+|||+|||+++++++|+++|..||.|..+.++.+..+|.++|||||+|.+.++|++|| .|||..|+|+.|.|..
T Consensus 5 ~~~~~~v~v~nLp~~~t~~~l~~~F~~~g~i~~~~~~~~~~~g~~~G~afV~F~s~~~a~~Al-~~n~~~i~gr~i~V~~ 83 (103)
T d2cpya1 5 NSAKVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKSE-RLHRKKLNGREAFVHV 83 (103)
T ss_dssp CSCCCEEEEESCCTTSCHHHHHHHTTTSCCCSTTEEECCCTTSSCSSCEEEECSSHHHHHHHG-GGCSEEETTEEEEEEE
T ss_pred CCCceEEEEeCCCCCCCHHHHhhhhcccceEEEEEEEEeCCCCCcCccEEEEECCHHHHHHHH-hcCCCeECCcEEEEEE
Confidence 445568999999999999999999999999987555555568999999999999999999999 5999999999999988
Q ss_pred ccc
Q 025814 215 SKW 217 (247)
Q Consensus 215 a~~ 217 (247)
+..
T Consensus 84 ~~~ 86 (103)
T d2cpya1 84 VTL 86 (103)
T ss_dssp ECH
T ss_pred CCH
Confidence 754
No 63
>d2adca2 d.58.7.1 (A:444-531) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.79 E-value=2.3e-19 Score=124.98 Aligned_cols=78 Identities=15% Similarity=0.159 Sum_probs=69.9
Q ss_pred CCCcEEEEcCCCCCCcHHHHHHHhccCCCeeEEEEEecCCCCCcceEEEEEecCHHHHHHHHHHhCCcee-CCEeEEEEE
Q 025814 136 ENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMAKVVRDKRTGKTKGYGFISFANPSDIAAALKEMNGKYV-GNRPIKLRK 214 (247)
Q Consensus 136 ~~~~~lfV~nLp~~~~e~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~~FV~f~~~~~a~~Al~~l~g~~i-~g~~l~V~~ 214 (247)
++.++|||+|||+++++++|+++|+.||.|..+.+.. +..+|||||+|.+.++|.+|+..|||..| +|+.|+|++
T Consensus 8 pPs~tL~V~NLp~~~te~~l~~~F~~~G~v~~~~~~~----~~~~~~afV~f~~~~~A~~A~~~l~~~~i~~g~~l~v~~ 83 (88)
T d2adca2 8 PPSATLHLSNIPPSVSEEDLKVLFSSNGGVVKGFKFF----QKDRKMALIQMGSVEEAVQALIDLHNHDLGENHHLRVSF 83 (88)
T ss_dssp CSCSEEEEECCCTTCCHHHHHHHHHTTSCCEEEEEEC----SSSTTCEEEEESSHHHHHHHHHHHTTCBSSSSCBCEEEE
T ss_pred CCCCEEEEECCCCCCCHHHHHHHhhccCCEEEEEEee----ecccceeEEEECCHHHHHHHHHhccCCEecCCCEEEEEe
Confidence 4466999999999999999999999999998887654 34578999999999999999999999988 589999999
Q ss_pred ccc
Q 025814 215 SKW 217 (247)
Q Consensus 215 a~~ 217 (247)
++.
T Consensus 84 sk~ 86 (88)
T d2adca2 84 SKS 86 (88)
T ss_dssp CSS
T ss_pred CCC
Confidence 875
No 64
>d1wg5a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.79 E-value=3.1e-19 Score=128.15 Aligned_cols=83 Identities=22% Similarity=0.241 Sum_probs=75.0
Q ss_pred CCCcEEEEcCCCCCCcHHHHHHHhccCCCeeEEEEEecCCCCCcceEEEEEecCHHHHHHHHHHhCCceeCCEeEEEEEc
Q 025814 136 ENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMAKVVRDKRTGKTKGYGFISFANPSDIAAALKEMNGKYVGNRPIKLRKS 215 (247)
Q Consensus 136 ~~~~~lfV~nLp~~~~e~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~~FV~f~~~~~a~~Al~~l~g~~i~g~~l~V~~a 215 (247)
.+...|||+|||+++++++|+++|..||.|..+.++.+..++.++|||||+|.+.++|++|+ .+|+..|+||.|+|..+
T Consensus 13 ~~~~~v~v~nLP~~~te~dI~~~F~~~g~v~~~v~~~~~~~~~~kG~afV~F~~~e~a~~a~-~~~~~~i~gR~i~V~~~ 91 (104)
T d1wg5a_ 13 ANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKAL-KKHKERIGHRYIEIFKS 91 (104)
T ss_dssp SCCCEEEEESCCTTCCHHHHHHHTTTCCEEEEEEECCBCSSSCBCSEEEEEESSHHHHHHHH-TTTTCCSSSSCCEEEEE
T ss_pred CCCcEEEEeCCCCCCCHHHHHHHHHhcCCceEEEEEEeCCCCCcceEEEEEeCCHHHHHHHH-hhCCCEEcceEEEEEEC
Confidence 34557999999999999999999999999988777777789999999999999999999999 59999999999999998
Q ss_pred cccc
Q 025814 216 KWQE 219 (247)
Q Consensus 216 ~~k~ 219 (247)
..++
T Consensus 92 ~~~~ 95 (104)
T d1wg5a_ 92 SRAE 95 (104)
T ss_dssp CTTT
T ss_pred CHHH
Confidence 7654
No 65
>d1weza_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.79 E-value=2.2e-19 Score=128.50 Aligned_cols=82 Identities=15% Similarity=0.142 Sum_probs=73.5
Q ss_pred CCCCcEEEEcCCCCCCcHHHHHHHhccCCCeeEEEEEecCCCCCcceEEEEEecCHHHHHHHHHHhCCceeCCEeEEEEE
Q 025814 135 PENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMAKVVRDKRTGKTKGYGFISFANPSDIAAALKEMNGKYVGNRPIKLRK 214 (247)
Q Consensus 135 ~~~~~~lfV~nLp~~~~e~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~~FV~f~~~~~a~~Al~~l~g~~i~g~~l~V~~ 214 (247)
...+.+|||+|||+++++++|+++|..|| +..|.++.+. +|..+|||||+|.+.++|++|+ .||+..|+||.|+|.+
T Consensus 12 ~~~~~~v~v~nLp~~~te~dl~~~F~~~~-~~~v~~~~~~-~g~~~G~afVeF~~~~~a~~Al-~~~~~~i~gR~I~V~~ 88 (102)
T d1weza_ 12 STTGHCVHMRGLPYRATENDIYNFFSPLN-PMRVHIEIGP-DGRVTGEADVEFATHEDAVAAM-AKDKANMQHRYVELFL 88 (102)
T ss_dssp CSSSCEEEEESCCTTCCHHHHHHSSCSCC-CSEEEEEESS-SSCEEEEEEEECSSSHHHHHHH-TTSSCCSSSSCCEEEE
T ss_pred CCCCCEEEEeCCCCcCCHHHHHHHHhccC-cceeeeEEec-CCcceEEEEEEECCHHHHHHHH-HcCCCEECCEEEEEEE
Confidence 45566999999999999999999999998 5578888884 6899999999999999999998 5899999999999999
Q ss_pred ccccc
Q 025814 215 SKWQE 219 (247)
Q Consensus 215 a~~k~ 219 (247)
+..+.
T Consensus 89 s~~~~ 93 (102)
T d1weza_ 89 NSTAG 93 (102)
T ss_dssp ECCCC
T ss_pred cCCCC
Confidence 87654
No 66
>d2adca1 d.58.7.1 (A:335-443) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.78 E-value=1.4e-19 Score=131.06 Aligned_cols=76 Identities=22% Similarity=0.367 Sum_probs=70.0
Q ss_pred cEEEEcCCCC-CCcHHHHHHHhccCCCeeEEEEEecCCCCCcceEEEEEecCHHHHHHHHHHhCCceeCCEeEEEEEccc
Q 025814 139 YRLFCGDLGN-EVNDDVLSKAFSRFPSFNMAKVVRDKRTGKTKGYGFISFANPSDIAAALKEMNGKYVGNRPIKLRKSKW 217 (247)
Q Consensus 139 ~~lfV~nLp~-~~~e~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~~FV~f~~~~~a~~Al~~l~g~~i~g~~l~V~~a~~ 217 (247)
.+|||+||++ .+++++|+++|+.||.|.+|.|++++ +|||||+|.+.++|.+|++.|||..|+|+.|+|++++.
T Consensus 3 ~~l~V~nL~p~~~te~~L~~~F~~fG~I~~v~i~~~~-----kg~afV~f~~~~~A~~ai~~lng~~l~g~~l~v~~s~~ 77 (109)
T d2adca1 3 SVLLVSNLNPERVTPQSLFILFGVYGDVQRVKILFNK-----KENALVQMADGNQAQLAMSHLNGHKLHGKPIRITLSKH 77 (109)
T ss_dssp SEEEEESCCTTTCCHHHHHHHHHHHTCEEEEEECCTT-----SCCEEEEESCHHHHHHHHHHHTTCBCSSSBCEEECCSC
T ss_pred CEEEEeCCCcccCCHHHHHHHHhhccccceEEEEecc-----cceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCC
Confidence 4899999965 59999999999999999999999874 78999999999999999999999999999999999875
Q ss_pred cc
Q 025814 218 QE 219 (247)
Q Consensus 218 k~ 219 (247)
+.
T Consensus 78 ~~ 79 (109)
T d2adca1 78 QN 79 (109)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 67
>d1wela1 d.58.7.1 (A:412-523) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.78 E-value=2e-19 Score=130.90 Aligned_cols=84 Identities=24% Similarity=0.361 Sum_probs=74.7
Q ss_pred CCCCcEEEEcCCCCCCcHHHHHHHhccCCCeeEEEEEecCCCCCcceEEEEEecCHHHHHHHHHHhCCceeCCEeEEEEE
Q 025814 135 PENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMAKVVRDKRTGKTKGYGFISFANPSDIAAALKEMNGKYVGNRPIKLRK 214 (247)
Q Consensus 135 ~~~~~~lfV~nLp~~~~e~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~~FV~f~~~~~a~~Al~~l~g~~i~g~~l~V~~ 214 (247)
....++|||+|||+++++++|+++|+.||.+..+.++.+..+|.++|||||+|.+.++|++|+ .|||..|+||.|.|..
T Consensus 15 ~~~~~~i~v~nLp~~~t~~di~~~F~~~g~~~~~~~~~~~~~g~~~G~afVeF~~~e~a~~al-~~~~~~i~gR~i~V~~ 93 (112)
T d1wela1 15 HEAGFCVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAAL-CRHKQYMGNRFIQVHP 93 (112)
T ss_dssp CCCCCEEEEECCCTTCCHHHHHHHSCSSCBCTTTCEEEECTTSSEEEEEEEEBSSSHHHHHHH-TSCSBCSTTSCBEEEE
T ss_pred CCCCeEEEEecCCCcCcHHHHhhHHhhccccccceeeecCcccceeeEEEEEECCHHHHHHHH-HcCCCcCCCEEEEEEE
Confidence 345668999999999999999999999999987666666679999999999999999999999 5999999999999998
Q ss_pred ccccc
Q 025814 215 SKWQE 219 (247)
Q Consensus 215 a~~k~ 219 (247)
+..+.
T Consensus 94 ~~~~~ 98 (112)
T d1wela1 94 ITKKG 98 (112)
T ss_dssp ECHHH
T ss_pred cChHH
Confidence 76544
No 68
>d1wg1a_ d.58.7.1 (A:) Probable RNA-binding protein KIAA1579 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.77 E-value=5.8e-19 Score=122.89 Aligned_cols=75 Identities=9% Similarity=0.183 Sum_probs=65.8
Q ss_pred CcEEEEcCCCCCCcHHHHHHHhccCCCeeEEEEEecCCCCCcceEEEEEecCHHHHHHHHHHhCCceeCCEeEEEEEccc
Q 025814 138 DYRLFCGDLGNEVNDDVLSKAFSRFPSFNMAKVVRDKRTGKTKGYGFISFANPSDIAAALKEMNGKYVGNRPIKLRKSKW 217 (247)
Q Consensus 138 ~~~lfV~nLp~~~~e~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~~FV~f~~~~~a~~Al~~l~g~~i~g~~l~V~~a~~ 217 (247)
..+|||+|||+++++++|+++|++|| +..+.+ +..+|||||+|.+.++|++|++.|||..|+|+.|+|++++.
T Consensus 5 s~~i~V~nLp~~~t~~~l~~lF~~~G-~~~~~~------~~~kg~afV~f~~~~~A~~Ai~~ln~~~~~G~~l~V~~a~~ 77 (88)
T d1wg1a_ 5 SSGILVKNLPQDSNCQEVHDLLKDYD-LKYCYV------DRNKRTAFVTLLNGEQAQNAIQMFHQYSFRGKDLIVQLQPT 77 (88)
T ss_dssp CCCEEEESCCSSCCHHHHHHHTCSSC-CCCEEE------EGGGTEEEECCSCHHHHHHHHHHHTTEEETTEEEEEEECCC
T ss_pred CCEEEEeCCCCccChHHHHHHHHhcC-ceeeee------eccCCceEEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCC
Confidence 34899999999999999999999999 333333 45688999999999999999999999999999999999865
Q ss_pred cc
Q 025814 218 QE 219 (247)
Q Consensus 218 k~ 219 (247)
+.
T Consensus 78 ~~ 79 (88)
T d1wg1a_ 78 DA 79 (88)
T ss_dssp CC
T ss_pred CC
Confidence 44
No 69
>d1wf0a_ d.58.7.1 (A:) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.77 E-value=1.9e-19 Score=125.38 Aligned_cols=77 Identities=12% Similarity=0.248 Sum_probs=68.4
Q ss_pred CCcEEEEcCCCCCCcHHHHHHHhccCCCeeEEEEEecCCCCCcceEEEEEecCHHHHHHHHHHhCCceeCCEeEEEEEcc
Q 025814 137 NDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMAKVVRDKRTGKTKGYGFISFANPSDIAAALKEMNGKYVGNRPIKLRKSK 216 (247)
Q Consensus 137 ~~~~lfV~nLp~~~~e~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~~FV~f~~~~~a~~Al~~l~g~~i~g~~l~V~~a~ 216 (247)
..++|||+|||+++++++|+++|++||.|.+|++. ..++|||||+|.+.++|++||. ++..|+|+.|+|++++
T Consensus 4 ~s~~lfV~nLp~~~te~~L~~~F~~~G~v~~v~~~-----~~~~gfafV~f~~~~~a~~a~~--~~~~i~g~~l~v~~a~ 76 (88)
T d1wf0a_ 4 GSSGVFVGRCTGDMTEDELREFFSQYGDVMDVFIP-----KPFRAFAFVTFADDQIAQSLCG--EDLIIKGISVHISNAE 76 (88)
T ss_dssp CCCEEEEESCCSSSCHHHHHHHSTTTSCCCEEECC-----SSCCSCCEEECSCHHHHHHTTT--CEEEETTEEEEEECCC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHcCCceEEEEe-----eccCceEEEEECCHHHHHHHHh--CCCEECCEEeEEEeCC
Confidence 34589999999999999999999999999998764 4468899999999999999984 8899999999999997
Q ss_pred cccc
Q 025814 217 WQER 220 (247)
Q Consensus 217 ~k~~ 220 (247)
++..
T Consensus 77 ~k~~ 80 (88)
T d1wf0a_ 77 PKHN 80 (88)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 6553
No 70
>d3begb1 d.58.7.1 (B:121-207) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.77 E-value=5.8e-20 Score=127.80 Aligned_cols=73 Identities=16% Similarity=0.201 Sum_probs=67.8
Q ss_pred EEEEcCCCCCCcHHHHHHHhccCCCeeEEEEEecCCCCCcceEEEEEecCHHHHHHHHHHhCCceeCCEeEEEEEccccc
Q 025814 140 RLFCGDLGNEVNDDVLSKAFSRFPSFNMAKVVRDKRTGKTKGYGFISFANPSDIAAALKEMNGKYVGNRPIKLRKSKWQE 219 (247)
Q Consensus 140 ~lfV~nLp~~~~e~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~~FV~f~~~~~a~~Al~~l~g~~i~g~~l~V~~a~~k~ 219 (247)
+|||+|||+++++++|+++|++||.|.++++..+ |||||+|.+.++|++||..|||..|+|+.|+|.+++.+.
T Consensus 2 rvfV~nlp~~~~~~~l~~~F~~~G~v~~~~i~~~-------g~afV~f~~~~~a~~Ai~~l~g~~~~g~~i~v~~~~~~~ 74 (87)
T d3begb1 2 RVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRD-------GTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVKV 74 (87)
T ss_dssp CEEEEECCSSCCTTHHHHHHGGGSCEEEEEECTT-------SEEEEEESSHHHHHHHHHHHTTCBCCCTTSCCCBCEEEE
T ss_pred eEEEECCCCcCCHHHHHHHHhhhccccccccccc-------ceeeEEeCCHHHHHHHHHHhCCCEECCcEeEEeEEecCc
Confidence 6999999999999999999999999999998654 799999999999999999999999999999998876543
No 71
>d1wi6a1 d.58.7.1 (A:69-143) Ribonucleoprotein PTB-binding 1, Raver-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.76 E-value=1.1e-18 Score=117.74 Aligned_cols=71 Identities=17% Similarity=0.312 Sum_probs=63.9
Q ss_pred EEEcCCCCCCcHHHHHHHhccCCCeeEEEEEecCCCCCcceEEEEEecCHHHHHHHHHHhCCceeCCEeEEEEEcccc
Q 025814 141 LFCGDLGNEVNDDVLSKAFSRFPSFNMAKVVRDKRTGKTKGYGFISFANPSDIAAALKEMNGKYVGNRPIKLRKSKWQ 218 (247)
Q Consensus 141 lfV~nLp~~~~e~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~~FV~f~~~~~a~~Al~~l~g~~i~g~~l~V~~a~~k 218 (247)
|||+|||+++++++|+++|++|| +..+.+ +..+|||||+|.+.++|++|++.|||..++|+.|+|+++...
T Consensus 1 i~V~nLp~~~t~~~l~~~F~~~g-~~~~~~------~~~~g~afv~f~~~~~A~~Ai~~ln~~~~~g~~l~V~~a~~d 71 (75)
T d1wi6a1 1 ILIRGLPGDVTNQEVHDLLSDYE-LKYCFV------DKYKGTAFVTLLNGEQAEAAINTFHQSRLRERELSVQLQPTD 71 (75)
T ss_dssp EEEECCCTTCCHHHHHHHTTTSC-EEEEEE------ETTTTEEEEEESSHHHHHHHHHHHTTEESSSCEEEEEECCST
T ss_pred CEEeCCCCcCCHHHHHHHHhccc-ccceee------cccceeEEEEECCHHHHHHHHHHhCCccCCCCEEEEEEeCCC
Confidence 79999999999999999999999 444443 456899999999999999999999999999999999998643
No 72
>d2adba1 d.58.7.1 (A:177-284) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.76 E-value=4.3e-19 Score=128.30 Aligned_cols=79 Identities=19% Similarity=0.269 Sum_probs=71.4
Q ss_pred CCcEEEEcCCCCCCcHHHHHHHhccCCCeeEEEEEecCCCCCcceEEEEEecCHHHHHHHHHHhCCcee--CCEeEEEEE
Q 025814 137 NDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMAKVVRDKRTGKTKGYGFISFANPSDIAAALKEMNGKYV--GNRPIKLRK 214 (247)
Q Consensus 137 ~~~~lfV~nLp~~~~e~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~~FV~f~~~~~a~~Al~~l~g~~i--~g~~l~V~~ 214 (247)
...+|||+||++.+++++|+++|++||.|.++.+++++ .+|||||+|.+.++|++|+..|||..| +|+.|+|.+
T Consensus 6 ~~~~v~V~NL~~~vte~~L~~~F~~~G~i~~~~i~~~~----~~g~aFV~f~~~e~A~~Ai~~ln~~~l~~~~~~l~v~~ 81 (108)
T d2adba1 6 PVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKN----NQFQALLQYADPVSAQHAKLSLDGQNIYNACCTLRIDF 81 (108)
T ss_dssp CEEEEESCSCCSTTHHHHHHHHHTTTSCEEEEEEEEET----TEEEEEEEESCHHHHHHHHHHHHSCCSSTTCCCCEEEE
T ss_pred CeEEEEEeCcCCCCCHHHHHHHHccCCcEEEEEEEeeC----CCCeEEEEECCHHHHHHHHHHHCCCEeccCCcEEEEEe
Confidence 34589999999999999999999999999999998874 479999999999999999999999988 578999999
Q ss_pred ccccc
Q 025814 215 SKWQE 219 (247)
Q Consensus 215 a~~k~ 219 (247)
++.+.
T Consensus 82 s~~~~ 86 (108)
T d2adba1 82 SKLTS 86 (108)
T ss_dssp CSSCS
T ss_pred cCCcc
Confidence 87654
No 73
>d2cq1a1 d.58.7.1 (A:51-138) Polypyrimidine tract-binding protein 2, PTBP2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.76 E-value=2.8e-18 Score=119.33 Aligned_cols=79 Identities=16% Similarity=0.165 Sum_probs=70.7
Q ss_pred CCCCcEEEEcCCCCCCcHHHHHHHhccCCCeeEEEEEecCCCCCcceEEEEEecCHHHHHHHHHHh--CCceeCCEeEEE
Q 025814 135 PENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMAKVVRDKRTGKTKGYGFISFANPSDIAAALKEM--NGKYVGNRPIKL 212 (247)
Q Consensus 135 ~~~~~~lfV~nLp~~~~e~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~~FV~f~~~~~a~~Al~~l--~g~~i~g~~l~V 212 (247)
..+.++|||+|||.++++++|+++|+.||.|.++++.++ +|||||+|.+.++|.+|++.| ++..++|+.|+|
T Consensus 5 ~~Ps~~l~V~nLp~~~t~~~L~~~f~~~G~i~~v~~~~~------~~~afV~f~~~e~A~~a~~~~~~~~~~~~g~~l~v 78 (88)
T d2cq1a1 5 GAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKG------KNQAFLELATEEAAITMVNYYSAVTPHLRNQPIYI 78 (88)
T ss_dssp SSCCSEEEEESCCTTCCHHHHHHTTTTTSCEEEEEEETT------TTEEEEEESSHHHHHHHHHHHHHSCCEETTEECEE
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHHhccccccccccccc------ceEEEEEeCCHHHHHHHHHHHccCCCccCCCEEEE
Confidence 456679999999999999999999999999999998865 469999999999999999865 577999999999
Q ss_pred EEccccc
Q 025814 213 RKSKWQE 219 (247)
Q Consensus 213 ~~a~~k~ 219 (247)
++++.+.
T Consensus 79 ~~sk~~~ 85 (88)
T d2cq1a1 79 QYSNHKE 85 (88)
T ss_dssp EECSCSS
T ss_pred EECCCCC
Confidence 9997654
No 74
>d1whya_ d.58.7.1 (A:) Putative RNA-binding protein 15B, Rbm15b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.75 E-value=1.5e-18 Score=123.04 Aligned_cols=78 Identities=24% Similarity=0.428 Sum_probs=70.4
Q ss_pred CCCcEEEEcCCCCCCcHHHHHHHhccCCCeeEEEEEecCCCCCcceEEEEEecCHHHHHHHHHHhCCceeCC--EeEEEE
Q 025814 136 ENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMAKVVRDKRTGKTKGYGFISFANPSDIAAALKEMNGKYVGN--RPIKLR 213 (247)
Q Consensus 136 ~~~~~lfV~nLp~~~~e~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~~FV~f~~~~~a~~Al~~l~g~~i~g--~~l~V~ 213 (247)
.+.++|||+|||+++++++|+++|++||.|..+++.++ +|||||+|.+.++|+.|++.|||..|+| ++|+|+
T Consensus 15 ~Ps~tl~V~nLp~~~t~~~l~~~f~~~G~i~~~~~~~~------~~~afV~f~~~~~A~~A~~~l~~~~i~g~~~~l~v~ 88 (97)
T d1whya_ 15 NPTTRLWVGGLGPNTSLAALAREFDRFGSIRTIDHVKG------DSFAYIQYESLDAAQAACAKMRGFPLGGPDRRLRVD 88 (97)
T ss_dssp CCCSCEEEECCCSSCCHHHHHHHHHTTSCEEEEEECSS------SCCEEEEESSHHHHHHHHHHHTTCBCSSSSCBCEEE
T ss_pred CCCCEEEEcCCCCCCCHHHHHHHHHhhcccceEeeecc------ccEEEeccCCHHHHHHHHHHhCCCEeCCCceEEEEE
Confidence 34569999999999999999999999999999998765 5799999999999999999999999986 589999
Q ss_pred Eccccc
Q 025814 214 KSKWQE 219 (247)
Q Consensus 214 ~a~~k~ 219 (247)
+++...
T Consensus 89 ~ak~~~ 94 (97)
T d1whya_ 89 FAKSGP 94 (97)
T ss_dssp ECCCCC
T ss_pred eCCCCC
Confidence 997643
No 75
>d1wg4a_ d.58.7.1 (A:) Splicing factor, arginine/serine-rich 9 (SFRS9) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.75 E-value=1.7e-18 Score=122.89 Aligned_cols=76 Identities=14% Similarity=0.223 Sum_probs=69.8
Q ss_pred CCCcEEEEcCCCCCCcHHHHHHHhccCCCeeEEEEEecCCCCCcceEEEEEecCHHHHHHHHHHhCCceeCCEeEEEEEc
Q 025814 136 ENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMAKVVRDKRTGKTKGYGFISFANPSDIAAALKEMNGKYVGNRPIKLRKS 215 (247)
Q Consensus 136 ~~~~~lfV~nLp~~~~e~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~~FV~f~~~~~a~~Al~~l~g~~i~g~~l~V~~a 215 (247)
...++|||+|||+++++++|+++|+.||.|.++.|.+ +|||||+|.+.++|++||+.|||..++|+.|+|.+.
T Consensus 13 ~~~~~i~V~Nlp~~~~~~~L~~~F~~~G~v~~~~i~~-------~g~afV~f~~~~~a~~Ai~~lng~~~~g~~i~v~~~ 85 (98)
T d1wg4a_ 13 RSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQK-------DGMGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYI 85 (98)
T ss_dssp SCSCEEEEECCCSSCCHHHHHHHHTTSSCEEEEEEET-------TTEEEEEESSHHHHHHHHHHHSSEEEECTTSCEEEE
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHHhhcccccccccc-------cceEEEEECCHHHHHHHHHHhCCCEeCCeEEEEEEE
Confidence 3456899999999999999999999999999998864 479999999999999999999999999999999998
Q ss_pred ccc
Q 025814 216 KWQ 218 (247)
Q Consensus 216 ~~k 218 (247)
+.+
T Consensus 86 ~~~ 88 (98)
T d1wg4a_ 86 RVY 88 (98)
T ss_dssp EEE
T ss_pred ecC
Confidence 654
No 76
>d1x4fa1 d.58.7.1 (A:8-106) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.74 E-value=4.3e-18 Score=121.02 Aligned_cols=79 Identities=16% Similarity=0.169 Sum_probs=70.3
Q ss_pred CCCCcEEEEcCCCCC-CcHHHHHHHhccCCCeeEEEEEecCCCCCcceEEEEEecCHHHHHHHHH--HhCCceeCCEeEE
Q 025814 135 PENDYRLFCGDLGNE-VNDDVLSKAFSRFPSFNMAKVVRDKRTGKTKGYGFISFANPSDIAAALK--EMNGKYVGNRPIK 211 (247)
Q Consensus 135 ~~~~~~lfV~nLp~~-~~e~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~~FV~f~~~~~a~~Al~--~l~g~~i~g~~l~ 211 (247)
...+++|||+|||.+ +++++|.++|+.||.|.++.++++ +|||||+|.+.++|.+|++ .+++..++|+.|+
T Consensus 15 ~~~~~~l~v~nLp~~~~te~~l~~~F~~fG~V~~v~~~~~------k~~afV~f~~~~~A~~Ai~~~~~~~~~~~gr~l~ 88 (99)
T d1x4fa1 15 QELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRM------KSQAFIEMETREDAMAMVDHCLKKALWFQGRCVK 88 (99)
T ss_dssp SCCCCEEEEESCCCSSCCSHHHHTTTTTTSCCSEEEEETT------TTEEEEECSSHHHHHHHHHHHHHSCCCSSSSCCE
T ss_pred CCCCCEEEEeCCcCCccCHHHHHhhhccccceeEEEEeec------CCcEEEEecchHHHHHHHHHHhcCCceECCEEEE
Confidence 445679999999985 899999999999999999999866 5799999999999999997 5788899999999
Q ss_pred EEEccccc
Q 025814 212 LRKSKWQE 219 (247)
Q Consensus 212 V~~a~~k~ 219 (247)
|.+++.+.
T Consensus 89 V~~s~~~~ 96 (99)
T d1x4fa1 89 VDLSEKYK 96 (99)
T ss_dssp EEEECSCS
T ss_pred EEEcCCcc
Confidence 99996543
No 77
>d1wexa_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein L-like {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.72 E-value=1.9e-17 Score=118.71 Aligned_cols=79 Identities=13% Similarity=0.115 Sum_probs=70.0
Q ss_pred CCCCcEEEEcCCCCCCcHHHHHHHhccCCCeeEEEEEecCCCCCcceEEEEEecCHHHHHHHHHHh--CCceeCCEeEEE
Q 025814 135 PENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMAKVVRDKRTGKTKGYGFISFANPSDIAAALKEM--NGKYVGNRPIKL 212 (247)
Q Consensus 135 ~~~~~~lfV~nLp~~~~e~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~~FV~f~~~~~a~~Al~~l--~g~~i~g~~l~V 212 (247)
.....+|||+|||.++++++|.++|+.||.|.++.+.++ +|||||+|.+.++|++|+..| ++..++|+.|+|
T Consensus 12 ~~ps~~l~v~nlp~~~te~~l~~~F~~fG~I~~~~~~~~------k~~AfV~f~~~e~A~~ai~~~~~~~~~~~g~~l~v 85 (104)
T d1wexa_ 12 VSVSPVVHVRGLCESVVEADLVEALEKFGTICYVMMMPF------KRQALVEFENIDSAKECVTFAADVPVYIAGQQAFF 85 (104)
T ss_dssp CCCCSEEEEESCCSSCCHHHHHHHHTTTSCEEEEEEETT------TTEEEEEESSHHHHHHHHHHHHHSCCBSSSSBCEE
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHhhhhcccceEEEEEec------ceeEEEEeCCHHHHHHHHHHHcCCCcEEeeEEEEE
Confidence 345669999999999999999999999999999998765 579999999999999999977 566889999999
Q ss_pred EEccccc
Q 025814 213 RKSKWQE 219 (247)
Q Consensus 213 ~~a~~k~ 219 (247)
.+++.+.
T Consensus 86 ~~s~~~~ 92 (104)
T d1wexa_ 86 NYSTSKR 92 (104)
T ss_dssp EECSSSS
T ss_pred EEcCCCc
Confidence 9997543
No 78
>d1x4da1 d.58.7.1 (A:8-96) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.70 E-value=2.4e-17 Score=114.78 Aligned_cols=78 Identities=17% Similarity=0.135 Sum_probs=69.2
Q ss_pred CCCCcEEEEcCCCCC-CcHHHHHHHhccCCCeeEEEEEecCCCCCcceEEEEEecCHHHHHHHHHHh--CCceeCCEeEE
Q 025814 135 PENDYRLFCGDLGNE-VNDDVLSKAFSRFPSFNMAKVVRDKRTGKTKGYGFISFANPSDIAAALKEM--NGKYVGNRPIK 211 (247)
Q Consensus 135 ~~~~~~lfV~nLp~~-~~e~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~~FV~f~~~~~a~~Al~~l--~g~~i~g~~l~ 211 (247)
.+..++|||+||+.. +++++|.++|+.||.|.++.++.+ +++|||+|++.++|..|++.| ++..++|++|+
T Consensus 5 ~~~sr~v~v~nl~~~~~t~~eL~~lF~~fG~I~~i~i~~~------k~~afV~f~~~~~A~~A~~~l~~~~~~~~gr~l~ 78 (89)
T d1x4da1 5 VETRRVVHIMDFQRGKNLRYQLLQLVEPFGVISNHLILNK------INEAFIEMATTEDAQAAVDYYTTTPALVFGKPVR 78 (89)
T ss_dssp CCCCCEEEEESCCCSSSHHHHHHTTTGGGSCEEEEEECSS------SSCEEEEESSHHHHHHHHHHHHHSCCEETTEECE
T ss_pred CCCCcEEEEECCCCCcCCHHHHHHHHHhhCCeEEEEeecc------ceEEEEEEcchhhHHHHHHHHhhCCCccCCceEE
Confidence 445668999999986 899999999999999999999876 358999999999999999965 67899999999
Q ss_pred EEEcccc
Q 025814 212 LRKSKWQ 218 (247)
Q Consensus 212 V~~a~~k 218 (247)
|.+++..
T Consensus 79 V~~s~~~ 85 (89)
T d1x4da1 79 VHLSQKY 85 (89)
T ss_dssp EEEECCC
T ss_pred EEECCCc
Confidence 9998743
No 79
>d1u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.70 E-value=8.2e-20 Score=127.81 Aligned_cols=76 Identities=16% Similarity=0.377 Sum_probs=67.3
Q ss_pred cEEEEcCCCCCCcHHHHHHHhccCCCeeEEEE-----EecCCCCCcceEEEEEecCHHHHHHHHHHhCCceeCCEeEEEE
Q 025814 139 YRLFCGDLGNEVNDDVLSKAFSRFPSFNMAKV-----VRDKRTGKTKGYGFISFANPSDIAAALKEMNGKYVGNRPIKLR 213 (247)
Q Consensus 139 ~~lfV~nLp~~~~e~~L~~~F~~~G~i~~v~i-----~~~~~tg~~kg~~FV~f~~~~~a~~Al~~l~g~~i~g~~l~V~ 213 (247)
++|||+|||+++++++|+++|+.||.|..+.+ +.+..++.++|||||+|.+.++|++|+ .|||..++|+.|+|+
T Consensus 2 RrlyVgNLp~~~te~~l~~~F~~~g~~~~~~~~~~~~~~~~~~~~~kg~afV~f~~~e~a~~a~-~l~g~~~~Gr~l~V~ 80 (90)
T d1u2fa_ 2 RRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAM-AFDGIIFQGQSLKIR 80 (90)
T ss_dssp CEEEECSCCTTCCTTHHHHHHHHHHTTTTSCCSSSCSEEECCEETTTTEEEEEESSCTTTTTGG-GGSSCCSSSSCCCCB
T ss_pred CEEEEcCCCCccchHHHHHHHHhhCcEEEEEEeccceeeecccCCCceEEEEEeCCHHHHHHHH-hhCCcEECCEEEEEC
Confidence 48999999999999999999999998866554 345567889999999999999999999 599999999999996
Q ss_pred Ec
Q 025814 214 KS 215 (247)
Q Consensus 214 ~a 215 (247)
.+
T Consensus 81 r~ 82 (90)
T d1u2fa_ 81 RP 82 (90)
T ss_dssp CT
T ss_pred CC
Confidence 43
No 80
>d1weya_ d.58.7.1 (A:) Calcipressin-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.69 E-value=1.1e-17 Score=119.76 Aligned_cols=78 Identities=14% Similarity=0.084 Sum_probs=68.8
Q ss_pred CCcEEEEcCCCCCCcH-----HHHHHHhccCCCeeEEEEEecCCCCCcceEEEEEecCHHHHHHHHHHhCCceeCCEeEE
Q 025814 137 NDYRLFCGDLGNEVND-----DVLSKAFSRFPSFNMAKVVRDKRTGKTKGYGFISFANPSDIAAALKEMNGKYVGNRPIK 211 (247)
Q Consensus 137 ~~~~lfV~nLp~~~~e-----~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~~FV~f~~~~~a~~Al~~l~g~~i~g~~l~ 211 (247)
...+|||+||+.++.+ ++|+.+|+.||.|.++++++. +|||||+|.+.++|.+|++.|||..|+|+.|+
T Consensus 4 ~~~~L~v~nl~~~v~~~d~~k~~l~~lF~~~G~i~~~~~~k~------~~~afV~f~~~~~A~~Ai~~lng~~~~g~~l~ 77 (104)
T d1weya_ 4 GSSGLIACVANDDVFSESETRAKFESLFRTYDKDTTFQYFKS------FKRVRINFSNPLSAADARLRLHKTEFLGKEMK 77 (104)
T ss_dssp CCCEEEEECCCGGGGSTTTHHHHHHHHHHTTCSSCEEEEETT------TTEEEEECSSTTHHHHHHHTSTTSEETTEECE
T ss_pred CCceEEEEeCCchhcCcHHHHHHHHHHhcccccceEEEEecC------CCEEEEEECCHHHHHHHHHHhcccccCCCEeE
Confidence 3458999999998633 569999999999999999754 67999999999999999999999999999999
Q ss_pred EEEcccccc
Q 025814 212 LRKSKWQER 220 (247)
Q Consensus 212 V~~a~~k~~ 220 (247)
|.+++.+..
T Consensus 78 v~~a~~~~~ 86 (104)
T d1weya_ 78 LYFAQTLHI 86 (104)
T ss_dssp EECCCCSSC
T ss_pred EeecccCCC
Confidence 999976654
No 81
>d1jmta_ d.58.7.3 (A:) U2AF35 (35 KDa subunit) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.67 E-value=5.9e-18 Score=121.26 Aligned_cols=75 Identities=15% Similarity=0.278 Sum_probs=71.0
Q ss_pred EEEEcCCCCCCcHHHHHHHhccCCCeeEEEEEecCCCCCcceEEEEEecCHHHHHHHHHHhCCceeCCEeEEEEEc
Q 025814 140 RLFCGDLGNEVNDDVLSKAFSRFPSFNMAKVVRDKRTGKTKGYGFISFANPSDIAAALKEMNGKYVGNRPIKLRKS 215 (247)
Q Consensus 140 ~lfV~nLp~~~~e~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~~FV~f~~~~~a~~Al~~l~g~~i~g~~l~V~~a 215 (247)
.++|.++...++|++|+++|++||.|.+|+|+++ .+|.++|||||+|.+.++|.+|++.|||..++||.|+|+++
T Consensus 29 ~~~v~~~~~~~~ed~l~e~f~k~G~I~~v~I~~~-~~~~~~G~~fV~f~~~~~A~~Ai~~lng~~~~gr~i~v~~s 103 (104)
T d1jmta_ 29 DVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDN-LGDHLVGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELS 103 (104)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCEEEEEECCS-SSSSSEEEEEEEESCHHHHHHHHHHHTTCEETTEECCEEEC
T ss_pred hHHhhhhhhhhhHHHHHHHhccCCCEEEEEeecC-CCCCEeeEEEEEEechhHHHHHHHHHCCCEECCEEEEEEEC
Confidence 5888999999999999999999999999999887 58999999999999999999999999999999999999875
No 82
>d1owxa_ d.58.7.1 (A:) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.62 E-value=2.3e-16 Score=114.59 Aligned_cols=77 Identities=19% Similarity=0.213 Sum_probs=66.0
Q ss_pred CCCcEEEEcCCCCCCcHHHHHHHhccCCCeeEEEEEecCCCCCcceEEEEEecCH-HHHHHHHHHhCCceeCCEeEEEEE
Q 025814 136 ENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMAKVVRDKRTGKTKGYGFISFANP-SDIAAALKEMNGKYVGNRPIKLRK 214 (247)
Q Consensus 136 ~~~~~lfV~nLp~~~~e~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~~FV~f~~~-~~a~~Al~~l~g~~i~g~~l~V~~ 214 (247)
.....+|||||++++|+++|+++|++||.|.+|.|+++ +|||||.|.+. ++|..|+..||+..+.++.+.|.+
T Consensus 9 ~g~~~~fvgnL~~~~tee~Lk~~F~~fG~V~~v~i~~~------kg~gfV~F~~~~~~A~~a~~~~~~~~l~~~~~~v~~ 82 (113)
T d1owxa_ 9 IGCLLKFSGDLDDQTCREDLHILFSNHGEIKWIDFVRG------AKEGIILFKEKAKEALGKAKDANNGNLQLRNKEVTW 82 (113)
T ss_dssp CCCEEEEEESCCSSCCHHHHHHHTCSSCCEEEEECCTT------CSEEEEEESSCHHHHHHHHHHTTTSCBCTTSSSEEE
T ss_pred CCCeEEEECCCCCCCCHHHHHHHHHhcCChheEEEecC------CceEEEEecCcHHHHHHHHHHhcCCceecCceEEEE
Confidence 33456799999999999999999999999999999865 68999999985 789999999999988877777766
Q ss_pred cccc
Q 025814 215 SKWQ 218 (247)
Q Consensus 215 a~~k 218 (247)
+..+
T Consensus 83 ~~~~ 86 (113)
T d1owxa_ 83 EVLE 86 (113)
T ss_dssp EECC
T ss_pred eecc
Confidence 6543
No 83
>d1u1qa_ d.58.7.1 (A:) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.60 E-value=2.6e-15 Score=117.57 Aligned_cols=80 Identities=26% Similarity=0.532 Sum_probs=73.5
Q ss_pred cEEEEcCCCCCCcHHHHHHHhccCCCeeEEEEEecCCCCCcceEEEEEecCHHHHHHHHHHhCCceeCCEeEEEEEcccc
Q 025814 139 YRLFCGDLGNEVNDDVLSKAFSRFPSFNMAKVVRDKRTGKTKGYGFISFANPSDIAAALKEMNGKYVGNRPIKLRKSKWQ 218 (247)
Q Consensus 139 ~~lfV~nLp~~~~e~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~~FV~f~~~~~a~~Al~~l~g~~i~g~~l~V~~a~~k 218 (247)
++|||+|||+++++++|+++|++||.|.++.++++..+|.++|||||+|.+.++|.+|+ .+++..++++.+.+.....+
T Consensus 7 r~lfV~nLp~~~te~~L~~~F~~~G~v~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~-~~~~~~~~~~~~~~~~~~~~ 85 (183)
T d1u1qa_ 7 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAM-NARPHKVDGRVVEPKRAVSR 85 (183)
T ss_dssp HEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHH-HTCSCEETTEECEEEECCCT
T ss_pred CEEEEECCCCCCCHHHHHHHHHHcCCEEEEEeeecccCCCccCceecccCCHHHHHHHH-HhcCCcccccchhhhhhhhc
Confidence 58999999999999999999999999999999999999999999999999999999999 46777889999888876554
Q ss_pred c
Q 025814 219 E 219 (247)
Q Consensus 219 ~ 219 (247)
.
T Consensus 86 ~ 86 (183)
T d1u1qa_ 86 E 86 (183)
T ss_dssp T
T ss_pred c
Confidence 4
No 84
>d2cq2a1 d.58.7.1 (A:25-125) Alkylation repair AlkB homolog 8, ALKBH8 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.56 E-value=2.9e-15 Score=106.43 Aligned_cols=64 Identities=22% Similarity=0.304 Sum_probs=57.1
Q ss_pred CCCcEEEEc--CCCCCCcHHHHHHHhccCCCeeEEEEEecCCCCCcceEEEEEecCHHHHHHHHHHhCCcee
Q 025814 136 ENDYRLFCG--DLGNEVNDDVLSKAFSRFPSFNMAKVVRDKRTGKTKGYGFISFANPSDIAAALKEMNGKYV 205 (247)
Q Consensus 136 ~~~~~lfV~--nLp~~~~e~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~~FV~f~~~~~a~~Al~~l~g~~i 205 (247)
.+..+|||+ ||+.++++++|+++|++||.|..+.+..+ +|||||+|.+.++|.+|++.|||..|
T Consensus 16 ~pt~~l~V~ng~L~~~vte~~L~~~F~~~G~i~~i~~~~~------k~~aFV~f~~~e~A~~A~~~lng~~i 81 (101)
T d2cq2a1 16 YATQSLVVANGGLGNGVSRNQLLPVLEKCGLVDALLMPPN------KPYSFARYRTTEESKRAYVTLNGKEV 81 (101)
T ss_dssp SCCSEEEEETCTGGGTCCHHHHHHHHHHHSCEEEEECCTT------CSCEEEEESSHHHHHHHHHHTTTCEE
T ss_pred CCCceEEEECCCCCCCCCHHHHHHHHHhhCcccEEeeccC------ccEEEEEECCHHHHHHHHHHhCCCCC
Confidence 334578885 59999999999999999999999988765 56999999999999999999999976
No 85
>d1wwha1 d.58.7.1 (A:169-249) Nucleoporin 35 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.55 E-value=4.1e-15 Score=101.21 Aligned_cols=73 Identities=14% Similarity=0.174 Sum_probs=61.8
Q ss_pred CcEEEEcCCCCCCcHHHHHHHhccCCCeeEEEEEecCCCCCcceEEEEEecCHHHHHHHHHHhCCceeCCEe-EEEEEcc
Q 025814 138 DYRLFCGDLGNEVNDDVLSKAFSRFPSFNMAKVVRDKRTGKTKGYGFISFANPSDIAAALKEMNGKYVGNRP-IKLRKSK 216 (247)
Q Consensus 138 ~~~lfV~nLp~~~~e~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~~FV~f~~~~~a~~Al~~l~g~~i~g~~-l~V~~a~ 216 (247)
++.|||+|||++.+++.| ++|++||.|.++++. ..+|||||+|.+.++|++|| .+||..|+|+. |.|....
T Consensus 4 ~~wV~V~G~p~~~~~~il-~~F~~~G~I~~~~~~------~~~~~~fV~f~~~~~A~~Al-~~nG~~~~g~~~vgV~~~~ 75 (81)
T d1wwha1 4 DTWVTVFGFPQASASYIL-LQFAQYGNILKHVMS------NTGNWMHIRYQSKLQARKAL-SKDGRIFGESIMIGVKPCI 75 (81)
T ss_dssp GGEEEEECCCGGGHHHHH-HHHHTTSCEEEEEEC------SSSSEEEEEESSHHHHHHHH-TTTTCEETTTEECEEEECC
T ss_pred ccEEEEECCChHHHHHHH-HHHHhhhhhheEEec------CCCCEEEEEEcccHHHHHHH-hcCCCeECCcEEEEEEeCC
Confidence 457999999999987655 579999999999874 34689999999999999999 59999999974 6787765
Q ss_pred cc
Q 025814 217 WQ 218 (247)
Q Consensus 217 ~k 218 (247)
.+
T Consensus 76 ~k 77 (81)
T d1wwha1 76 DK 77 (81)
T ss_dssp CH
T ss_pred Ch
Confidence 44
No 86
>d2dita1 d.58.7.1 (A:8-106) HIV Tat-specific factor 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.52 E-value=3.2e-14 Score=100.54 Aligned_cols=80 Identities=14% Similarity=0.304 Sum_probs=68.3
Q ss_pred CCCcEEEEcCC--CCCCc---------HHHHHHHhccCCCeeEEEEEecCCCCCcceEEEEEecCHHHHHHHHHHhCCce
Q 025814 136 ENDYRLFCGDL--GNEVN---------DDVLSKAFSRFPSFNMAKVVRDKRTGKTKGYGFISFANPSDIAAALKEMNGKY 204 (247)
Q Consensus 136 ~~~~~lfV~nL--p~~~~---------e~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~~FV~f~~~~~a~~Al~~l~g~~ 204 (247)
...++|+|.|| +.++. +++|++.|++||.|..|.+..+ ..+||+||+|.+.++|.+|+..|||..
T Consensus 6 ~~~r~v~l~nmf~~~~~~~~~~~~~~i~edv~~~~~~~G~V~~v~~~~~----~~~G~~fV~f~~~e~A~~A~~~lng~~ 81 (99)
T d2dita1 6 RHERVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIRKLLLFDR----HPDGVASVSFRDPEEADYCIQTLDGRW 81 (99)
T ss_dssp CSCCEEEEESSCCTTHHHHCSHHHHHHHHHHHHHGGGTSCCSEEEEETT----CTTCEEEEECSCHHHHHHHHHHSTTCE
T ss_pred CCccEEEEccCCCHHHhhcchHHHHHHHHHHHHHhcCcccEEEEeccCC----CCccEEEEEECCHHHHHHHHHHhCCcE
Confidence 44568999999 54332 2678999999999999988654 457999999999999999999999999
Q ss_pred eCCEeEEEEEccccc
Q 025814 205 VGNRPIKLRKSKWQE 219 (247)
Q Consensus 205 i~g~~l~V~~a~~k~ 219 (247)
++||.|+|.+..++.
T Consensus 82 ~~gr~i~v~~~~g~~ 96 (99)
T d2dita1 82 FGGRQITAQAWDGTT 96 (99)
T ss_dssp ETTEECEEEECCSCC
T ss_pred ECCEEEEEEEeCCcC
Confidence 999999999988765
No 87
>d1o0pa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.42 E-value=1.1e-13 Score=98.69 Aligned_cols=80 Identities=15% Similarity=0.170 Sum_probs=67.7
Q ss_pred CCcEEEEcCC--CCCCc--------HHHHHHHhccCCCeeEEEEEecCCCC--CcceEEEEEecCHHHHHHHHHHhCCce
Q 025814 137 NDYRLFCGDL--GNEVN--------DDVLSKAFSRFPSFNMAKVVRDKRTG--KTKGYGFISFANPSDIAAALKEMNGKY 204 (247)
Q Consensus 137 ~~~~lfV~nL--p~~~~--------e~~L~~~F~~~G~i~~v~i~~~~~tg--~~kg~~FV~f~~~~~a~~Al~~l~g~~ 204 (247)
+.+.|.|.|| +.++. .++|++.|++||.|.+|.|.++..+. ...|++||+|.+.++|.+|+..|||..
T Consensus 3 Ps~vl~l~N~~~~~~l~~~~~~~~i~edi~~e~~k~G~v~~v~I~~~~~~~~~~~~g~vfV~f~~~e~A~~A~~~l~Gr~ 82 (104)
T d1o0pa_ 3 PTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRPVDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGRK 82 (104)
T ss_dssp CCSEEEEESSCCTTTTTSHHHHHHHHHHHHHHHTTTSCEEEEECCCCTTSSSCTTCCEEEEEESCHHHHHHHHHHHSSCC
T ss_pred CCcEEEEeCCCCHHHcCCchhHHHHHHHHHHHhcccCceEEEEEeecCCCCccCCceEEEEEECCHHHHHHHHHHHCCCE
Confidence 3457999999 44432 35789999999999999998876443 356899999999999999999999999
Q ss_pred eCCEeEEEEEcc
Q 025814 205 VGNRPIKLRKSK 216 (247)
Q Consensus 205 i~g~~l~V~~a~ 216 (247)
++||.|.|.+..
T Consensus 83 f~gR~v~v~f~~ 94 (104)
T d1o0pa_ 83 FANRVVVTKYCD 94 (104)
T ss_dssp SSSSCCEEEEEC
T ss_pred ECCeEEEEEEcC
Confidence 999999999975
No 88
>d1ufwa_ d.58.7.1 (A:) Synaptojanin 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.09 E-value=5e-06 Score=55.38 Aligned_cols=72 Identities=13% Similarity=0.262 Sum_probs=57.9
Q ss_pred CCCCcEEEEcCCCCCC------cH---HHHHHHhccCCCeeEEEEEecCCCCCcceEEEEEecCHHHHHHHHHHhCCcee
Q 025814 135 PENDYRLFCGDLGNEV------ND---DVLSKAFSRFPSFNMAKVVRDKRTGKTKGYGFISFANPSDIAAALKEMNGKYV 205 (247)
Q Consensus 135 ~~~~~~lfV~nLp~~~------~e---~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~~FV~f~~~~~a~~Al~~l~g~~i 205 (247)
.+.+.+|.|.=+..+. +| ++|.+.|..||+|.-|+++.| --+|+|.+-++|.+|+ .++|.++
T Consensus 12 GPpDgTIvV~i~~~s~e~~~~FDe~l~~~Llq~l~~~GeViLvRFv~d--------~mwVTF~dG~SAL~al-~l~g~~v 82 (95)
T d1ufwa_ 12 GPLDATVVVNLQSPTLEEKNEFPEDLRTELMQTLGSYGTIVLVRINQG--------QMLVTFADSHSALSVL-DVDGMKV 82 (95)
T ss_dssp CCTTCEEEEEESSCCHHHHHSCCHHHHHHHHHHHHHHSCCSEEEEETT--------EEEEECSCSHHHHHHH-HGGGSEE
T ss_pred CCCCcEEEEEeccCCccccccCCHHHHHHHHHHHhhCCeEEEEEEeCC--------eEEEEECCcHHHHHHh-ccCCeEE
Confidence 4455588885444332 22 367888999999999999988 5799999999999999 7999999
Q ss_pred CCEeEEEEEc
Q 025814 206 GNRPIKLRKS 215 (247)
Q Consensus 206 ~g~~l~V~~a 215 (247)
.|+.|+|...
T Consensus 83 ~G~~l~It~~ 92 (95)
T d1ufwa_ 83 KGRAVKISGP 92 (95)
T ss_dssp TTEEEEEECC
T ss_pred cceEEEEecC
Confidence 9999999754
No 89
>d1uw4a_ d.58.7.4 (A:) RNA processing protein UPF3x, RRM domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.59 E-value=0.00018 Score=48.27 Aligned_cols=67 Identities=13% Similarity=0.225 Sum_probs=56.8
Q ss_pred EEEEcCCCCCCcHHHHHHHhccCCCeeEEEEEecCCCCCc--ceEEEEEecCHHHHHHHHHHhCCceeC
Q 025814 140 RLFCGDLGNEVNDDVLSKAFSRFPSFNMAKVVRDKRTGKT--KGYGFISFANPSDIAAALKEMNGKYVG 206 (247)
Q Consensus 140 ~lfV~nLp~~~~e~~L~~~F~~~G~i~~v~i~~~~~tg~~--kg~~FV~f~~~~~a~~Al~~l~g~~i~ 206 (247)
+|-|++||+.++++++.+.++..|.+........+.+.+. -.-|+|.|.+.+++..-.+.++|..+.
T Consensus 3 KvVvRrLPP~Lte~~F~~~l~~~~~~d~~~f~~Gk~s~~~~~~SRAYi~F~~~~~v~~F~~~f~g~~F~ 71 (91)
T d1uw4a_ 3 KVVIRRLPPTLTKEQLQEHLQPMPEHDYFEFFSNDTSLYPHMYARAYINFKNQEDIILFRDRFDGYVFL 71 (91)
T ss_dssp EEEEEEECTTCCHHHHHHHHCSCCCEEEEEEEESCCSSTTCCCEEEEEEESSSHHHHHHHHHHTTCEEE
T ss_pred eEEEecCCCCCCHHHHHHHhCCcCceEEEEEeCCCcCCCCCcceEEEEEeCCHHHHHHHHHHcCCcEEE
Confidence 7999999999999999999999999887777776544332 246899999999999999999999763
No 90
>d2dgxa1 d.58.7.1 (A:563-635) Limkain-b1, LKAP {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.50 E-value=0.00027 Score=44.56 Aligned_cols=61 Identities=15% Similarity=0.232 Sum_probs=50.9
Q ss_pred HHHHHhccCCCeeEEEEEecCCCCCcceEEEEEecCHHHHHHHHHHhCCceeCCEeEEEEEccc
Q 025814 154 VLSKAFSRFPSFNMAKVVRDKRTGKTKGYGFISFANPSDIAAALKEMNGKYVGNRPIKLRKSKW 217 (247)
Q Consensus 154 ~L~~~F~~~G~i~~v~i~~~~~tg~~kg~~FV~f~~~~~a~~Al~~l~g~~i~g~~l~V~~a~~ 217 (247)
.|...|..+|.|.++.|.... .|.. .|-|...+..+|..|+..|+...|++++|.|.++.+
T Consensus 12 ~L~~~f~~h~~V~sv~l~~~~-dg~~--~A~V~v~~~q~A~~~v~~LhR~KiG~KRI~Vs~~~~ 72 (73)
T d2dgxa1 12 LLQEAFARHGKVKSVELSPHT-DYQL--KAVVQMENLQDAIGAVNSLHRYKIGSKKILVSLATG 72 (73)
T ss_dssp HHHHHHHHHSCEEEEEECSCC-STTC--CEEEEESSHHHHHHHHHHHTTEEETTEEEEEEECCC
T ss_pred HHHHHHHhheeEEEEEEEecc-CCcE--EEEEEcCCHHHHHHHHHHHHHHhcCCeEEEEEEecC
Confidence 455678999999999886552 2333 588999999999999999999999999999998753
No 91
>d1x4ba1 d.58.7.1 (A:8-110) Heterogeneous nuclear ribonucleoproteins A2/B1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.02 E-value=0.002 Score=44.02 Aligned_cols=57 Identities=16% Similarity=0.195 Sum_probs=45.8
Q ss_pred CCCccccccccchhhhcCCCceeeCccCHHHHHHHHhc--Cccchhhhhhccccccccc
Q 025814 66 VAPVYSLPQYHQAQQLFQRDAQTITPEALESVKAALAS--SDIEHKAETKKKSIPRKAA 122 (247)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~a~~al~~--~~~~~~~~~~~~~~~r~~~ 122 (247)
+|.+..+....+..+..++|++||+|.+.++|.+|+.. ..++++.+.++.+.++...
T Consensus 44 ~G~i~~~~i~~d~~~~~~kg~aFV~f~~~~~a~~al~~~~~~l~G~~i~V~~a~~ke~~ 102 (103)
T d1x4ba1 44 WGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAARPHSIDGRVVEPKRAVAREES 102 (103)
T ss_dssp SCCCSEEEEECCTTTSSCCSEEEEECSSHHHHHHHHTSCSEEETTEEEEEECCSSCCCC
T ss_pred hCcccceeecccccCCCccCeEEEEECCHHHHHHHHHhCCCeECCEEEEEEECcccCCC
Confidence 47777776666777778899999999999999999974 3678888888887776554
No 92
>d1whva_ d.58.7.1 (A:) Poly(A)-specific ribonuclease PARN {Mouse (Mus musculus) [TaxId: 10090]}
Probab=96.01 E-value=0.012 Score=39.27 Aligned_cols=54 Identities=20% Similarity=0.346 Sum_probs=45.4
Q ss_pred EEEEcCCCCCCcHHHHHHHhccCCCeeEEEEEecCCCCCcceEEEEEecCHHHHHHHHHHhC
Q 025814 140 RLFCGDLGNEVNDDVLSKAFSRFPSFNMAKVVRDKRTGKTKGYGFISFANPSDIAAALKEMN 201 (247)
Q Consensus 140 ~lfV~nLp~~~~e~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~~FV~f~~~~~a~~Al~~l~ 201 (247)
-||.-.+|..+...||.++|+.||.|. |..+.| | -|||...+.++++.++..++
T Consensus 17 HVf~~tFP~~Wk~~dI~~lFSpfG~V~-VswIdd--T-----Sa~V~L~~~e~~~~v~~~~~ 70 (100)
T d1whva_ 17 HVLHVTFPKEWKTSDLYQLFSAFGNIQ-ISWIDD--T-----SAFVSLSQPEQVQIAVNTSK 70 (100)
T ss_dssp SEEEEECCTTCCHHHHHHHHTTTCSCC-CEEEET--T-----EEEEECSCHHHHHHHHHHHH
T ss_pred eeEEEeCCcccchhHHHHHhcCCCceE-EEEecC--c-----eEEEEecCHHHHHHHHHHhc
Confidence 588889999999999999999999885 444555 3 79999999999999886544
No 93
>d1hd0a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein d0 {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.62 E-value=0.0033 Score=40.14 Aligned_cols=49 Identities=14% Similarity=0.034 Sum_probs=39.2
Q ss_pred CCccccccccchhhhcCCCceeeCccCHHHHHHHHhc--Cccchhhhhhcc
Q 025814 67 APVYSLPQYHQAQQLFQRDAQTITPEALESVKAALAS--SDIEHKAETKKK 115 (247)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~a~~al~~--~~~~~~~~~~~~ 115 (247)
|.+..+....+..+..++|++||+|.+.+++.+|++. ..+.|+.+.+++
T Consensus 24 G~i~~~~i~~d~~t~~~kg~afV~f~~~~~a~~Al~~~~~~l~Gr~i~V~r 74 (75)
T d1hd0a_ 24 GEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKR 74 (75)
T ss_dssp SCEEEEECCCBTTTTBCCSEEEEEESSHHHHHHHHHTCCCCBTTBCCEECC
T ss_pred ccccccccccCCCCCCcCceEEEEECCHHHHHHHHhcCCCEECCCEEEeeE
Confidence 6777777777777888999999999999999999974 356777666543
No 94
>d1uawa_ d.58.7.1 (A:) Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=95.45 E-value=0.003 Score=40.61 Aligned_cols=50 Identities=16% Similarity=0.061 Sum_probs=40.0
Q ss_pred CCCccccccccchhhhcCCCceeeCccCHHHHHHHHhc--Cccchhhhhhcc
Q 025814 66 VAPVYSLPQYHQAQQLFQRDAQTITPEALESVKAALAS--SDIEHKAETKKK 115 (247)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~a~~al~~--~~~~~~~~~~~~ 115 (247)
+|.+..+....+..+..++|++||+|++.+++.+|++. +.++++.+.++.
T Consensus 24 ~G~i~~v~i~~d~~tg~~kG~aFV~f~~~~~a~~al~~~~~~i~Gr~i~V~~ 75 (77)
T d1uawa_ 24 FGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKV 75 (77)
T ss_dssp TSCCCCEEEECCCCSSSCSSEEEECCCCTTHHHHHHHTTTCCCSSCCCEEEE
T ss_pred hCCcceeeeecccCCCCccceEEEEECCHHHHHHHHHcCCCEECCeEEEEEE
Confidence 47777777777788888999999999999999999864 466777666543
No 95
>d2cqga1 d.58.7.1 (A:96-185) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.41 E-value=0.0016 Score=43.36 Aligned_cols=55 Identities=7% Similarity=-0.008 Sum_probs=43.8
Q ss_pred CCCccccccccchhhhcCCCceeeCccCHHHHHHHHhcC-ccchhhhhhccccccc
Q 025814 66 VAPVYSLPQYHQAQQLFQRDAQTITPEALESVKAALASS-DIEHKAETKKKSIPRK 120 (247)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~a~~al~~~-~~~~~~~~~~~~~~r~ 120 (247)
+|.+..+....+..+..++|++||+|.+.+++.+||... .++|+.+.++.+..++
T Consensus 32 ~G~i~~v~i~~d~~tg~srG~aFV~f~~~~~a~~al~~~~~l~Gr~i~v~~a~~k~ 87 (90)
T d2cqga1 32 FGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQRHMIDGRWCDCKLPNSKQ 87 (90)
T ss_dssp GSCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHSCEEETTEEEEEECCCTTC
T ss_pred hcccceeeeccCCCCcccCCEEEEEECCHHHHHHHHhcCCccCCEEeEEEeCCCCC
Confidence 377777777777778899999999999999999999753 5778888777665543
No 96
>d1x0fa1 d.58.7.1 (A:183-257) Nuclear ribonucleoprotein D0 (AUF1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.93 E-value=0.0039 Score=39.86 Aligned_cols=48 Identities=19% Similarity=0.057 Sum_probs=37.7
Q ss_pred CCccccccccchhhhcCCCceeeCccCHHHHHHHHhc--Cccchhhhhhc
Q 025814 67 APVYSLPQYHQAQQLFQRDAQTITPEALESVKAALAS--SDIEHKAETKK 114 (247)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~a~~al~~--~~~~~~~~~~~ 114 (247)
|.+..+....+..+..++|++||+|++.+++.+||+. +.++++.++++
T Consensus 24 G~I~~v~i~~d~~t~~~rG~~FV~f~~~~~a~~al~~~~~~i~g~~i~vk 73 (75)
T d1x0fa1 24 GEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIK 73 (75)
T ss_dssp SCEEEEECCCCTTTCCTTCCEEEEESSSHHHHHHTTCSSCCBTTBCCEEE
T ss_pred CCcccccccccccccccccEEEEEECCHHHHHHHHhhCCCEECCEEeEEE
Confidence 6666666677777888999999999999999999975 35666665543
No 97
>d2cqba1 d.58.7.1 (A:1-89) Peptidyl-prolyl cis-trans isomerase E, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.93 E-value=0.0087 Score=39.33 Aligned_cols=54 Identities=13% Similarity=0.060 Sum_probs=42.4
Q ss_pred CCCccccccccchhhhcCCCceeeCccCHHHHHHHHh---cCccchhhhhhcccccc
Q 025814 66 VAPVYSLPQYHQAQQLFQRDAQTITPEALESVKAALA---SSDIEHKAETKKKSIPR 119 (247)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~a~~al~---~~~~~~~~~~~~~~~~r 119 (247)
+|.+..+....+..+..++|++||+|++.++|..|+. +..+.++.+.+..+.++
T Consensus 29 ~G~i~~v~i~~d~~~~~~kg~afV~f~~~~~A~~ai~~l~~~~i~g~~l~v~~a~p~ 85 (89)
T d2cqba1 29 FGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNMNESELFGRTIRVNLAKPM 85 (89)
T ss_dssp TSCCCCEECCCCSSSCCCSSEEEECCSSHHHHHHHHHHHTTEEETTEEEEEEECCCC
T ss_pred CCeEEecccccccccccccceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEEeCCC
Confidence 4777777777777778899999999999999888875 45688888887766543
No 98
>d1x5ta1 d.58.7.1 (A:8-90) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.51 E-value=0.015 Score=37.45 Aligned_cols=54 Identities=7% Similarity=0.062 Sum_probs=39.5
Q ss_pred CCcccc-ccccchhhhcCCCceeeCccCHHHHHHHHhc---Cccchhhhhhccccccc
Q 025814 67 APVYSL-PQYHQAQQLFQRDAQTITPEALESVKAALAS---SDIEHKAETKKKSIPRK 120 (247)
Q Consensus 67 ~~~~~~-~~~~~~~~~~~~~~~~v~~~~~~~a~~al~~---~~~~~~~~~~~~~~~r~ 120 (247)
|.+... ....+..+..+++++||+|++.++|..|+.. ..++++.+.+..+.++.
T Consensus 23 G~i~~~~~i~~~~~~g~~~g~afV~f~~~~~a~~Ai~~~~g~~~~gr~l~v~~a~~k~ 80 (83)
T d1x5ta1 23 GVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKD 80 (83)
T ss_dssp SCBSSCCEECCCTTTCSCCSEEEEEBSSHHHHHHHHHTTTTCEETTEECEEEESCCCC
T ss_pred CceeeeEEEEeeccccccCceEEEEECCHHHHHHHHHhCCCcEECCEEEEEEEecCCC
Confidence 444332 2445556677899999999999999999863 46788888887766543
No 99
>d1x5ua1 d.58.7.1 (A:7-99) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.49 E-value=0.0095 Score=39.52 Aligned_cols=53 Identities=11% Similarity=-0.024 Sum_probs=42.4
Q ss_pred CCccccccccchhhhcCCCceeeCccCHHHHHHHHh---cCccchhhhhhcccccc
Q 025814 67 APVYSLPQYHQAQQLFQRDAQTITPEALESVKAALA---SSDIEHKAETKKKSIPR 119 (247)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~a~~al~---~~~~~~~~~~~~~~~~r 119 (247)
|.+..+....+..+..++|++||.|.+.++|..|+. +..+.++.+.++.+..+
T Consensus 34 G~v~~v~~~~d~~tg~~kg~afV~f~~~~~A~~Ai~~l~g~~~~g~~l~V~~A~~~ 89 (93)
T d1x5ua1 34 GPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMDMIKLYGKPIRVNKASAH 89 (93)
T ss_dssp SCEEEEECCBCSSSCSBCSCEEEEESSHHHHHHHHHHSSSCBCSSCBCEEEETTTT
T ss_pred CCccccceeecccccccccceEEEECCHHHHHHHHHHcCCCEECCEEEEEEEcCCC
Confidence 667777667777788899999999999999999885 35788888888776544
No 100
>d1whwa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=94.32 E-value=0.012 Score=39.33 Aligned_cols=55 Identities=15% Similarity=-0.018 Sum_probs=43.5
Q ss_pred CCccccccccchhhhcCCCceeeCccCHHHHHHHHhc---Cccchhhhhhcccccccc
Q 025814 67 APVYSLPQYHQAQQLFQRDAQTITPEALESVKAALAS---SDIEHKAETKKKSIPRKA 121 (247)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~a~~al~~---~~~~~~~~~~~~~~~r~~ 121 (247)
+.+..+....+..+..+++++||+|++.+++.+|+.. ..+.++.+.+..+..+..
T Consensus 33 g~v~~v~i~~d~~tg~~~g~afV~f~~~~~a~~A~~~l~g~~~~gr~i~V~~a~~~~~ 90 (99)
T d1whwa_ 33 GPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAEVDGQVFQGRMLHVLPSTIKKE 90 (99)
T ss_dssp SCEEEEECCCCTTTCCCCSEEEEEESSHHHHHHHHHHTTTEESSSCEEEEEECCCCST
T ss_pred CCceeeeecccccccccCcceEEEECCHHHHHHHHHHcCCCEECCEEEEEEECCCCCc
Confidence 6666666666777788999999999999999888753 478888888877766543
No 101
>d1l3ka1 d.58.7.1 (A:8-91) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.29 E-value=0.0045 Score=40.43 Aligned_cols=50 Identities=14% Similarity=0.173 Sum_probs=40.6
Q ss_pred CCccccccccchhhhcCCCceeeCccCHHHHHHHHhc--Cccchhhhhhccc
Q 025814 67 APVYSLPQYHQAQQLFQRDAQTITPEALESVKAALAS--SDIEHKAETKKKS 116 (247)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~a~~al~~--~~~~~~~~~~~~~ 116 (247)
|.+..+....+..+..++|++||+|.+.+.+.+|++. ..+.|+.+.++++
T Consensus 31 G~i~~v~i~~d~~tg~~kG~afV~f~~~~~a~~ai~~~~~~i~Gr~i~V~~A 82 (84)
T d1l3ka1 31 GTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRA 82 (84)
T ss_dssp SCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHTCSCEETTEECEEEEC
T ss_pred ccccceeecccccCCCcccEEEEEEcCHHHHHHHHHhCCCEECCEEEEEEee
Confidence 6777777777778888999999999999999999974 3677777776554
No 102
>d1u6fa1 d.58.7.1 (A:1-139) RNA-binding protein UBP1 {Trypanosoma cruzi [TaxId: 5693]}
Probab=94.05 E-value=0.0055 Score=43.88 Aligned_cols=54 Identities=15% Similarity=0.075 Sum_probs=42.5
Q ss_pred CCccccccccchhhhcCCCceeeCccCHHHHHHHHhc---Cccchhhhhhccccccc
Q 025814 67 APVYSLPQYHQAQQLFQRDAQTITPEALESVKAALAS---SDIEHKAETKKKSIPRK 120 (247)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~a~~al~~---~~~~~~~~~~~~~~~r~ 120 (247)
|.+..+....+..+..++|++||+|.+.++|..|+.. ..+.++.+.+..+..+.
T Consensus 67 G~i~~v~i~~d~~t~~~rg~afV~f~~~~~A~~Ai~~lng~~~~gr~l~V~~a~~~~ 123 (139)
T d1u6fa1 67 GPIESVKIVCDRETRQSRGYGFVKFQSGSSAQQAIAGLNGFNILNKRLKVALAASGH 123 (139)
T ss_dssp SCEEEEEEEEETTTTEEEEEEEEEESSHHHHHHHHHHTTTEECSSCEEEEEESSCCC
T ss_pred ccccccccccccccccccceeeEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCCCC
Confidence 6666666666666777899999999999999998863 57889999988776544
No 103
>d2msta_ d.58.7.1 (A:) Neural RNA-binding protein Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=93.98 E-value=0.022 Score=35.77 Aligned_cols=49 Identities=18% Similarity=0.061 Sum_probs=36.9
Q ss_pred CCccccccccchhhhcCCCceeeCccCHHHHHHHHhc--Cccchhhhhhcc
Q 025814 67 APVYSLPQYHQAQQLFQRDAQTITPEALESVKAALAS--SDIEHKAETKKK 115 (247)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~a~~al~~--~~~~~~~~~~~~ 115 (247)
|.+..+....+......++++||+|++.+++.+|++. ..++++.++++.
T Consensus 24 G~i~~~~~~~~~~~~~~~~~afV~F~~~~~a~~al~~~~~~l~gr~i~V~~ 74 (75)
T d2msta_ 24 GKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKK 74 (75)
T ss_dssp SCCSEECCBCCTTCTTSCCEEEEECSCHHHHHHHHHCSSCCBTTBCCEEEE
T ss_pred CCcceeeeeeeccccccCceeEEEECCHHHHHHHHhcCCCEECCeEEEEEE
Confidence 5555555556666778899999999999999999864 467777766643
No 104
>d1x4ha1 d.58.7.1 (A:8-105) RNA-binding protein 28 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=93.86 E-value=0.013 Score=38.99 Aligned_cols=53 Identities=8% Similarity=0.058 Sum_probs=38.2
Q ss_pred CCccccccccchhhhcCCCceeeCccCHHHHHHHHhc---------Cccchhhhhhcccccc
Q 025814 67 APVYSLPQYHQAQQLFQRDAQTITPEALESVKAALAS---------SDIEHKAETKKKSIPR 119 (247)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~a~~al~~---------~~~~~~~~~~~~~~~r 119 (247)
|.+..+....+......+|++||+|.+.+++.+|+.. ..++++.+.+..+..+
T Consensus 33 G~v~~~~~~~~~~~~~~~g~afV~F~~~~~a~~ai~~l~~~~~~~g~~~~gr~l~v~~a~~k 94 (98)
T d1x4ha1 33 GDLKYVRVVLHPDTEHSKGCAFAQFMTQEAAQKCLAAASLEAEGGGLKLDGRQLKVDLAVTR 94 (98)
T ss_dssp SCEEEEECCBCSSSCCBCSEEEEEESSHHHHHHHHHHHCTTTTTCCEESSSCEEEEECCCCC
T ss_pred ccceeeeeccccccccccceEEEEEcCHHHHHHHHHHcccccccCCcEECCEEEEEEECCCC
Confidence 5555555555666777899999999999999999873 2456666666655444
No 105
>d1b7fa1 d.58.7.1 (A:123-204) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=93.62 E-value=0.013 Score=37.58 Aligned_cols=51 Identities=6% Similarity=0.046 Sum_probs=39.7
Q ss_pred CCCccccccccchhhhcCCCceeeCccCHHHHHHHHh---cCccchhhhhhccc
Q 025814 66 VAPVYSLPQYHQAQQLFQRDAQTITPEALESVKAALA---SSDIEHKAETKKKS 116 (247)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~a~~al~---~~~~~~~~~~~~~~ 116 (247)
+|.+..+....+......++++||+|++.++|..|+. +..+.++.+.+..+
T Consensus 26 ~G~v~~~~i~~~~~~g~~~g~afV~f~~~~~A~~ai~~lng~~~~g~~l~v~~a 79 (82)
T d1b7fa1 26 IGPINTCRIMRDYKTGYSYGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSYA 79 (82)
T ss_dssp TSCEEEEECCEETTTTEECSEEEEEESSHHHHHHHHHHHTTCEETTEECEEEEC
T ss_pred hCCcceeeeeeecccCCccccceEEECCHHHHHHHHHHhCCCEECCEEEEEEEc
Confidence 3667777677777778889999999999999998875 45677777766554
No 106
>d2cqda1 d.58.7.1 (A:1-103) RNA-binding region containing protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.50 E-value=0.023 Score=38.27 Aligned_cols=52 Identities=10% Similarity=-0.026 Sum_probs=41.9
Q ss_pred CCCccccccccchhhhcCCCceeeCccCHHHHHHHHhcC--ccchhhhhhcccc
Q 025814 66 VAPVYSLPQYHQAQQLFQRDAQTITPEALESVKAALASS--DIEHKAETKKKSI 117 (247)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~a~~al~~~--~~~~~~~~~~~~~ 117 (247)
+|.+..+....+..+..+++++||+|++.++|.+|++.. .+.++.+.++.+.
T Consensus 34 ~G~i~~v~i~~d~~tg~~kg~afV~f~~~~~A~~Ai~~~~~~l~Gr~l~V~~a~ 87 (103)
T d2cqda1 34 FGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPNPIIDGRKANVNLAY 87 (103)
T ss_dssp TSCEEEEEESCCSSSCCCCSEEEEEESSHHHHHHHHTCSSCEETTEECEEEEST
T ss_pred cccccceeccccccccccCCeEEEEECCHHHHHHHHHHCCCcCCCEEEEEEEcC
Confidence 377777777777778889999999999999999999854 4677777776544
No 107
>d2cq0a1 d.58.7.1 (A:231-320) Eukaryotic translation initiation factor 3 subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.46 E-value=0.0087 Score=39.40 Aligned_cols=54 Identities=11% Similarity=0.023 Sum_probs=42.0
Q ss_pred CCCccccccccchhhhcCCCceeeCccCHHHHHHHHhc---Cccchhhhhhcccccc
Q 025814 66 VAPVYSLPQYHQAQQLFQRDAQTITPEALESVKAALAS---SDIEHKAETKKKSIPR 119 (247)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~a~~al~~---~~~~~~~~~~~~~~~r 119 (247)
+|.+..+....+.....++|++||+|++.++|..|+.. ..+.++.+.+..+.++
T Consensus 32 ~G~v~~v~i~~d~~t~~~rg~afV~f~~~~~A~~Ai~~l~g~~~~g~~i~v~~akp~ 88 (90)
T d2cq0a1 32 FGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGVSGFGYDHLILNVEWAKPS 88 (90)
T ss_dssp TCCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHHTTTCEETTEECEEEESSCC
T ss_pred hcccccccccccccccccccceeEEECCHHHHHHHHHHhCCCEECCEEEEEEeeeCC
Confidence 47777776666667778899999999999999988764 4678888877766544
No 108
>d2cq4a1 d.58.7.1 (A:132-232) RNA binding protein 23 {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.46 E-value=0.0045 Score=41.96 Aligned_cols=52 Identities=12% Similarity=0.025 Sum_probs=40.3
Q ss_pred CCCccccccccchhhhcCCCceeeCccCHHHHHHHHh--cCccchhhhhhcccc
Q 025814 66 VAPVYSLPQYHQAQQLFQRDAQTITPEALESVKAALA--SSDIEHKAETKKKSI 117 (247)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~a~~al~--~~~~~~~~~~~~~~~ 117 (247)
+|.+..+....+..+..++|++||+|++.+++.+|++ +..+.++.+.++.+.
T Consensus 42 ~G~V~~v~i~~d~~tg~~kG~afV~F~~~e~a~~A~~l~g~~~~G~~l~V~~a~ 95 (101)
T d2cq4a1 42 VGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQ 95 (101)
T ss_dssp TSCEEEEEECCSCCSSSCCCCEEEEESCGGGHHHHHHHTTEEETTEEEEEEEHH
T ss_pred CCeEEEEEeeecCCCccccceEEEEECCHHHHHHHHHHCCCEECCEEEEEEECC
Confidence 4777777777777788899999999999998888875 346777777665543
No 109
>d2u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.36 E-value=0.017 Score=37.56 Aligned_cols=53 Identities=8% Similarity=0.071 Sum_probs=42.4
Q ss_pred CCCccccccccchhhhcCCCceeeCccCHHHHHHHHhc---Cccchhhhhhccccc
Q 025814 66 VAPVYSLPQYHQAQQLFQRDAQTITPEALESVKAALAS---SDIEHKAETKKKSIP 118 (247)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~a~~al~~---~~~~~~~~~~~~~~~ 118 (247)
+|.+..+....+..+..+++++||+|.+.++|..|+.. ..+.++.+.+..+..
T Consensus 25 ~G~v~~v~i~~d~~tg~~rg~aFV~f~~~~~A~~a~~~l~~~~l~g~~l~V~~A~~ 80 (85)
T d2u2fa_ 25 FGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASV 80 (85)
T ss_dssp SSCEEEEEEECCCSSSCCCCEEEEEESSSHHHHHHHHTSSSCCCSSSCCEEEECCC
T ss_pred cCccceEEeeccccccccceeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCC
Confidence 47777777777777889999999999999999998863 467888777766543
No 110
>d1rk8a_ d.58.7.1 (A:) RNA-binding protein 8 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=92.89 E-value=0.0096 Score=39.04 Aligned_cols=52 Identities=10% Similarity=0.038 Sum_probs=40.2
Q ss_pred CCccccccccchhhhcCCCceeeCccCHHHHHHHHh---cCccchhhhhhccccc
Q 025814 67 APVYSLPQYHQAQQLFQRDAQTITPEALESVKAALA---SSDIEHKAETKKKSIP 118 (247)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~a~~al~---~~~~~~~~~~~~~~~~ 118 (247)
|.+..+....+..+..+++++||+|++.++|..|+. +..+.++.+.+..+..
T Consensus 32 G~i~~v~i~~d~~tg~~~g~afV~f~~~~~A~~A~~~lng~~l~g~~l~V~~a~~ 86 (88)
T d1rk8a_ 32 GEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEALNGAEIMGQTIQVDWCFV 86 (88)
T ss_dssp SCEEEEEEEECTTTSSEEEEEEEEESSHHHHHHHHHHHTTCEETTEECEEEESEE
T ss_pred CCcccccccccccccccccceeEEECCHHHHHHHHHHcCCCEECCEEEEEEEecC
Confidence 677777666777778889999999999999988875 4567787777765543
No 111
>d1l3ka2 d.58.7.1 (A:103-181) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.78 E-value=0.013 Score=37.37 Aligned_cols=50 Identities=10% Similarity=0.060 Sum_probs=39.4
Q ss_pred CCccccccccchhhhcCCCceeeCccCHHHHHHHHhc--Cccchhhhhhccc
Q 025814 67 APVYSLPQYHQAQQLFQRDAQTITPEALESVKAALAS--SDIEHKAETKKKS 116 (247)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~a~~al~~--~~~~~~~~~~~~~ 116 (247)
|.+..+....+.....++|++||+|++.+++.+++.. ..++|+.+.++++
T Consensus 27 G~i~~~~~~~~~~~~~~~g~afV~f~~~e~~~~al~~~~~~l~Gr~i~V~~A 78 (79)
T d1l3ka2 27 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA 78 (79)
T ss_dssp SCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHCSCCEETTEECEEEEC
T ss_pred ccccccccccCCCCcccccEEEEEEcCHHHHHHHHHhCCCEECCEEEEEEEC
Confidence 6666666667777888899999999999999999864 4678887776543
No 112
>d2cpza1 d.58.7.1 (A:383-484) CUG triplet repeat RNA-binding protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.58 E-value=0.016 Score=38.99 Aligned_cols=53 Identities=15% Similarity=0.064 Sum_probs=40.4
Q ss_pred CCccccccccchhhhcCCCceeeCccCHHHHHHHHh---cCccchhhhhhcccccc
Q 025814 67 APVYSLPQYHQAQQLFQRDAQTITPEALESVKAALA---SSDIEHKAETKKKSIPR 119 (247)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~a~~al~---~~~~~~~~~~~~~~~~r 119 (247)
|.+..+....+.....++|++||+|++.++|..|+. +..+.++.+.+..+.++
T Consensus 43 G~i~~~~~~~~~~~g~~kG~afV~f~~~~~A~~Ai~~lng~~~~g~~i~V~~a~~k 98 (102)
T d2cpza1 43 GNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSK 98 (102)
T ss_dssp SCCSEEEEEECSSSCSEEEEEEEECSSHHHHHHHHHHHTTCEETTEECEEECCCCS
T ss_pred ccccccceeeecccCCCccceEEEeCCHHHHHHHHHHhCCCEECCEEEEEEEeCCC
Confidence 566666666666677889999999999999988875 45788888877665544
No 113
>d2ghpa1 d.58.7.1 (A:116-196) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=92.55 E-value=0.033 Score=35.50 Aligned_cols=50 Identities=16% Similarity=-0.009 Sum_probs=31.4
Q ss_pred CCccccccccchhhhcCCCceeeCccCHHHHHHHHh---cCccchhhhhhccc
Q 025814 67 APVYSLPQYHQAQQLFQRDAQTITPEALESVKAALA---SSDIEHKAETKKKS 116 (247)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~a~~al~---~~~~~~~~~~~~~~ 116 (247)
|.+.......+.....+++++||+|.+.++|.+|+. +..+.++.+.++.+
T Consensus 26 G~v~~~~~~~~~~~~~~~g~afV~f~~~e~A~~Ai~~l~g~~~~g~~i~V~~a 78 (81)
T d2ghpa1 26 NVVALSIRLPSLRFNTSRRFAYIDVTSKEDARYCVEKLNGLKIEGYTLVTKVS 78 (81)
T ss_dssp TCCCCEEECC-------CCEEEEECSSHHHHHHHHHHHTTCEETTEECEEEEC
T ss_pred CcEEeeeeecccccccccceeEEEECCHHHHHHHHHHhCCCEECCEEEEEEEc
Confidence 444444444455567789999999999999998875 45777877776554
No 114
>d1p1ta_ d.58.7.1 (A:) Cleavage stimulation factor, 64 kda subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.25 E-value=0.025 Score=38.07 Aligned_cols=51 Identities=14% Similarity=0.094 Sum_probs=39.0
Q ss_pred CCCccccccccchhhhcCCCceeeCccCHHHHHHHHhc---Cccchhhhhhccc
Q 025814 66 VAPVYSLPQYHQAQQLFQRDAQTITPEALESVKAALAS---SDIEHKAETKKKS 116 (247)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~a~~al~~---~~~~~~~~~~~~~ 116 (247)
+|.+..+....+..+..++|++||+|.+.+++..|+.. ..+.++.+.+..+
T Consensus 32 ~G~i~~v~i~~~~~tg~~~g~afV~f~~~~~a~~ai~~l~~~~~~g~~i~V~~a 85 (104)
T d1p1ta_ 32 VGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNA 85 (104)
T ss_dssp TSCCSEEEEEEETTTTEEEEEEEEECSCHHHHHHHHHHSSSBSCSSSCBEEEET
T ss_pred cccccccccccccceeccCCceEEEECCHHHHHHHHHHcCCCEECCEEEEEEEC
Confidence 36777776767777788899999999999999999864 4666766665543
No 115
>d1x5sa1 d.58.7.1 (A:8-97) Cold-inducible RNA-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.24 E-value=0.031 Score=36.42 Aligned_cols=53 Identities=9% Similarity=0.103 Sum_probs=39.5
Q ss_pred CCccccccccchhhhcCCCceeeCccCHHHHHHHHh---cCccchhhhhhcccccc
Q 025814 67 APVYSLPQYHQAQQLFQRDAQTITPEALESVKAALA---SSDIEHKAETKKKSIPR 119 (247)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~a~~al~---~~~~~~~~~~~~~~~~r 119 (247)
|.+..+...........+|++||+|++.+++..|+. +..+.++.+.+..+..+
T Consensus 30 G~i~~~~~~~~~~~~~~~g~afV~f~~~~~a~~Ai~~l~~~~~~g~~l~V~~a~~~ 85 (90)
T d1x5sa1 30 GQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQAGKS 85 (90)
T ss_dssp SCCCEEEECCCSSSCSCCSEEEEECSSHHHHHHHHHHHTTCCTTSCCCEEEEEECC
T ss_pred ccccceeeccccccccccceEEEEECCHHHHHHHHHHcCCCEECCEEEEEEEcCCC
Confidence 555555555555667789999999999999999874 56788888887765443
No 116
>d1cvja2 d.58.7.1 (A:91-179) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.08 E-value=0.033 Score=36.34 Aligned_cols=51 Identities=10% Similarity=-0.007 Sum_probs=36.3
Q ss_pred CCccccccccchhhhcCCCceeeCccCHHHHHHHHhc---Cccchhhhhhcccccc
Q 025814 67 APVYSLPQYHQAQQLFQRDAQTITPEALESVKAALAS---SDIEHKAETKKKSIPR 119 (247)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~a~~al~~---~~~~~~~~~~~~~~~r 119 (247)
|.+..+....+. ..+++++||+|++.++|.+|+.. ..+.++.+.+..+..+
T Consensus 33 G~v~~~~i~~~~--~~~kg~afV~f~~~~~A~~Ai~~l~g~~~~g~~i~V~~a~~~ 86 (89)
T d1cvja2 33 GNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSR 86 (89)
T ss_dssp SCEEEEEECCBT--TBCCSCEEEEESCHHHHHHHTTSSSEEEETTEEEEEEECCCT
T ss_pred CCceEEEEEeec--CCCcceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEECCCC
Confidence 555554444443 23689999999999999999864 3677887777666544
No 117
>d1cvja1 d.58.7.1 (A:11-90) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.56 E-value=0.019 Score=36.76 Aligned_cols=50 Identities=14% Similarity=0.045 Sum_probs=39.1
Q ss_pred CCccccccccchhhhcCCCceeeCccCHHHHHHHHhc---Cccchhhhhhccc
Q 025814 67 APVYSLPQYHQAQQLFQRDAQTITPEALESVKAALAS---SDIEHKAETKKKS 116 (247)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~a~~al~~---~~~~~~~~~~~~~ 116 (247)
|.+..+....+.++..+++++||+|.+.+++..|+.. ..+.++.+++..+
T Consensus 25 G~i~~v~i~~d~~tg~~~g~aFV~f~~~~~a~~ai~~l~g~~~~gr~i~v~~a 77 (80)
T d1cvja1 25 GPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWS 77 (80)
T ss_dssp SCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHTTSTTCEETTEECEEEEC
T ss_pred CCEeEEEEEecccccCCCCceEEEECCHHHHHHHHHHcCCCEECCEEEEEEEe
Confidence 6677777777777888899999999999999999864 4667776665443
No 118
>d1x4ea1 d.58.7.1 (A:8-79) RNA-binding motif, single-stranded-interacting protein 2, RBMS2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.40 E-value=0.039 Score=34.30 Aligned_cols=47 Identities=9% Similarity=0.083 Sum_probs=35.4
Q ss_pred CCCCccccccccchhhhcCCCceeeCccCHHHHHHHHh---cCccchhhh
Q 025814 65 PVAPVYSLPQYHQAQQLFQRDAQTITPEALESVKAALA---SSDIEHKAE 111 (247)
Q Consensus 65 P~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~a~~al~---~~~~~~~~~ 111 (247)
.+|.+..+....+......++++||+|++.++|.+|++ +..++++.+
T Consensus 21 ~~G~v~~~~~~~~~~~~~~~g~afV~f~~~~~A~~Ai~~lng~~~~Gr~~ 70 (72)
T d1x4ea1 21 PYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVTALKASGVQAQMA 70 (72)
T ss_dssp TTSCEEEEEEECCSSSCSCCSEEEEEESCHHHHHHHHHHHHHHTCCEESC
T ss_pred hhccccccccccccccccccceeEEEECCHHHHHHHHHHhCCCEECCEEC
Confidence 34777776666677778899999999999999998875 345555543
No 119
>d2cpha1 d.58.7.1 (A:454-547) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=91.39 E-value=0.057 Score=35.55 Aligned_cols=52 Identities=6% Similarity=-0.060 Sum_probs=37.7
Q ss_pred CCccccccccch-hhhcCCCceeeCccCHHHHHHHHhc----Cccchhhhhhccccc
Q 025814 67 APVYSLPQYHQA-QQLFQRDAQTITPEALESVKAALAS----SDIEHKAETKKKSIP 118 (247)
Q Consensus 67 ~~~~~~~~~~~~-~~~~~~~~~~v~~~~~~~a~~al~~----~~~~~~~~~~~~~~~ 118 (247)
|.+..+....+. .+..++|++||+|.+.++|..|++. ..+.|+.+.+..+..
T Consensus 33 G~i~~v~i~~~~~~~g~~rg~afV~f~~~~~A~~Ai~~l~~~~~~~Gr~l~V~~A~~ 89 (94)
T d2cpha1 33 GELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKAFNALCHSTHLYGRRLVLEWADS 89 (94)
T ss_dssp SCEEEEECCCCCSSSCSSCSEEEEEESSHHHHHHHHHHHHTCCBSSSCBCEEEECCC
T ss_pred CCceEEEEEeccccCCCcccEEEEEECCHHHHHHHHHHccCCcEECCEEEEEEEcCC
Confidence 666655544443 3677899999999999999999853 457888777766543
No 120
>d1fxla1 d.58.7.1 (A:37-118) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.35 E-value=0.024 Score=36.21 Aligned_cols=50 Identities=6% Similarity=-0.089 Sum_probs=37.8
Q ss_pred CCccccccccchhhhcCCCceeeCccCHHHHHHHHh---cCccchhhhhhccc
Q 025814 67 APVYSLPQYHQAQQLFQRDAQTITPEALESVKAALA---SSDIEHKAETKKKS 116 (247)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~a~~al~---~~~~~~~~~~~~~~ 116 (247)
|.+..+....+......++++||+|++.+++..|+. +..+.++.+.+..+
T Consensus 27 G~v~~v~i~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~g~~l~v~~A 79 (82)
T d1fxla1 27 GEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYA 79 (82)
T ss_dssp SCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCEETTEECEEEEC
T ss_pred CCcccccceeeccCCCceeeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEe
Confidence 666666666666677889999999999999988875 45777777766554
No 121
>d2cpxa1 d.58.7.1 (A:291-392) RNA-binding protein 41, RBM41 {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.62 E-value=0.062 Score=35.73 Aligned_cols=54 Identities=17% Similarity=-0.053 Sum_probs=39.3
Q ss_pred CCccccccccchhhhcCCCceeeCccCHHHHHHHHh---cCccchhhhhhccccccc
Q 025814 67 APVYSLPQYHQAQQLFQRDAQTITPEALESVKAALA---SSDIEHKAETKKKSIPRK 120 (247)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~a~~al~---~~~~~~~~~~~~~~~~r~ 120 (247)
|.+..+....+.....+++++||.|.+.++|..|+. +..+.++.+.+..+..+.
T Consensus 43 G~v~~~~~~~~~~~g~~~g~~fV~f~~~~~A~~Ai~~l~g~~~~g~~l~V~~ak~k~ 99 (102)
T d2cpxa1 43 QEKKGPPIQFRMMTGRMRGQAFITFPNKEIAWQALHLVNGYKLYGKILVIEFGKNKK 99 (102)
T ss_dssp HHSSSSCCEEEEECSSSCSEEEEECSSHHHHHHHHHHSTTCBCSSCBCEEEECCCCS
T ss_pred cceeeEEeecccccccccccceEEeccHHHHHHHHHHhCCCEECCEEEEEEeCCCcc
Confidence 444444444455566779999999999999999985 457788888877766543
No 122
>d2ghpa3 d.58.7.1 (A:206-291) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=90.41 E-value=0.042 Score=35.55 Aligned_cols=51 Identities=14% Similarity=0.070 Sum_probs=34.5
Q ss_pred CCcccccccc-chhhhcCCCceeeCccCHHHHHHHHhc--Cccchhhhhhcccc
Q 025814 67 APVYSLPQYH-QAQQLFQRDAQTITPEALESVKAALAS--SDIEHKAETKKKSI 117 (247)
Q Consensus 67 ~~~~~~~~~~-~~~~~~~~~~~~v~~~~~~~a~~al~~--~~~~~~~~~~~~~~ 117 (247)
|.+..+.... +......+|++||+|++.+++.+|+.. ..+.++.+.+..+.
T Consensus 30 G~i~~v~i~~~~~~~~~~kg~afV~f~~~~~a~~Al~~n~~~~~gr~l~V~~a~ 83 (86)
T d2ghpa3 30 GSIEKINIPAGQKEHSFNNCCAFMVFENKDSAERALQMNRSLLGNREISVSLAD 83 (86)
T ss_dssp SCEEEEECCSCCC---CCCEEEEEEESSHHHHHHHGGGTTEEETTEEEEEEECC
T ss_pred hhccceeeecccCCccccceeeeEEECCHHHHHHHHhcCCCEECCEEEEEEEcC
Confidence 6665554433 345677899999999999999999853 35667777665544
No 123
>d1h2vz_ d.58.7.1 (Z:) CBP20, 20KDa nuclear cap-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.13 E-value=0.036 Score=36.49 Aligned_cols=50 Identities=2% Similarity=-0.092 Sum_probs=39.7
Q ss_pred CCccccccccchhhhcCCCceeeCccCHHHHHHHHhc---Cccchhhhhhccc
Q 025814 67 APVYSLPQYHQAQQLFQRDAQTITPEALESVKAALAS---SDIEHKAETKKKS 116 (247)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~a~~al~~---~~~~~~~~~~~~~ 116 (247)
|.+..+....+..+..++|++||+|.+.++|..|+.. ..+.++.+.+..+
T Consensus 32 G~i~~v~i~~~~~~~~~kg~afV~f~~~~~A~~Ai~~l~g~~~~gr~i~V~~a 84 (93)
T d1h2vz_ 32 GDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRYINGTRLDDRIIRTDWD 84 (93)
T ss_dssp SCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHTTTSEETTEECEEEEE
T ss_pred CCcceeccccccccccccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEc
Confidence 6777777777777788899999999999999999863 4677877777554
No 124
>d2cpfa1 d.58.7.1 (A:362-446) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=89.90 E-value=0.045 Score=35.18 Aligned_cols=50 Identities=12% Similarity=0.097 Sum_probs=35.5
Q ss_pred CCccccccccchhh---hcCCCceeeCccCHHHHHHHHh---cCccchhhhhhccc
Q 025814 67 APVYSLPQYHQAQQ---LFQRDAQTITPEALESVKAALA---SSDIEHKAETKKKS 116 (247)
Q Consensus 67 ~~~~~~~~~~~~~~---~~~~~~~~v~~~~~~~a~~al~---~~~~~~~~~~~~~~ 116 (247)
|.+..+....+... ..++|++||+|++.++|.+|+. +..+.++.+.+..+
T Consensus 23 G~v~~v~i~~~~~~~~~~~~kG~afV~f~~~~~A~~A~~~~~~~~~~g~~i~V~~a 78 (85)
T d2cpfa1 23 GAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKALKQLQGHTVDGHKLEVRIS 78 (85)
T ss_dssp SCEEEEEEEEEECTTCCEEEEEEEEEEESSHHHHHHHHHHSTTCEETTEECEEECS
T ss_pred CCccccceecccccccccccceEEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEC
Confidence 55655544444332 3568999999999999999875 45778888877654
No 125
>d2cpea1 d.58.7.1 (A:353-453) RNA-binding protein EWS {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.79 E-value=0.14 Score=33.81 Aligned_cols=45 Identities=16% Similarity=0.143 Sum_probs=35.4
Q ss_pred ccchhhhcCCCceeeCccCHHHHHHHHh---cCccchhhhhhcccccc
Q 025814 75 YHQAQQLFQRDAQTITPEALESVKAALA---SSDIEHKAETKKKSIPR 119 (247)
Q Consensus 75 ~~~~~~~~~~~~~~v~~~~~~~a~~al~---~~~~~~~~~~~~~~~~r 119 (247)
..+.+....++++||+|.+.++|..|+. +..+.++.+.+..+..+
T Consensus 49 ~~d~~~~~~~g~afV~f~~~~~a~~Ai~~l~g~~~~gr~i~V~~a~~~ 96 (101)
T d2cpea1 49 YLDKETGKPKGDATVSYEDPPTAKAAVEWFDGKDFQGSKLKVSLARKK 96 (101)
T ss_dssp CBCTTTCSBCSEEEEEBSSHHHHHHHHHHHTTCEETTEECEEECSSCC
T ss_pred eeccccccccceeeEEecCHHHHHHHHHHhCCCEECCEEEEEEEcCCC
Confidence 3444567789999999999999888865 56788999888777654
No 126
>d2cq3a1 d.58.7.1 (A:110-202) RNA-binding protein 9 {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.73 E-value=0.09 Score=34.39 Aligned_cols=52 Identities=10% Similarity=0.052 Sum_probs=38.2
Q ss_pred CCccccccccchhhhcCCCceeeCccCHHHHHHHHh---cCccchhhhhhccccccc
Q 025814 67 APVYSLPQYHQAQQLFQRDAQTITPEALESVKAALA---SSDIEHKAETKKKSIPRK 120 (247)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~a~~al~---~~~~~~~~~~~~~~~~r~ 120 (247)
|.+..+....+.. .+++++||+|++.+++.+|+. +..+.++.+.+..+.+|.
T Consensus 36 G~v~~v~~~~~~~--~~kg~afV~f~~~~~a~~Ai~~l~~~~~~g~~l~V~~A~~r~ 90 (93)
T d2cq3a1 36 GKILDVEIIFNER--GSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARV 90 (93)
T ss_dssp SCEEEEEEECCTT--TTCCEEEEEESCHHHHHHHHHHHTTCEETTEECEEEECCSSC
T ss_pred ceeeecccccccc--CCcceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEecCcCC
Confidence 5555554444433 368999999999999999874 567888888887776553
No 127
>d1fjeb1 d.58.7.1 (B:1-91) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=89.69 E-value=0.058 Score=35.33 Aligned_cols=40 Identities=15% Similarity=0.061 Sum_probs=31.2
Q ss_pred hhhhcCCCceeeCccCHHHHHHHHh--cCccchhhhhhcccc
Q 025814 78 AQQLFQRDAQTITPEALESVKAALA--SSDIEHKAETKKKSI 117 (247)
Q Consensus 78 ~~~~~~~~~~~v~~~~~~~a~~al~--~~~~~~~~~~~~~~~ 117 (247)
.....+++++||+|++.+++.+||. +..+.++.+.+..+.
T Consensus 48 ~~~g~~kg~afv~F~~~e~a~~Al~~~g~~~~g~~i~V~~ak 89 (91)
T d1fjeb1 48 VRTGTNRKFGYVDFESAEDLEKALELTGLKVFGNEIKLEKPK 89 (91)
T ss_dssp EEEETTTTEEEEEESSHHHHHHHHHGGGEEETTEEEEEECCC
T ss_pred cCCCCccEEeEEeeCCHHHHHHHHhcCCcEECCEEEEEEecC
Confidence 3466789999999999999999975 346777777776554
No 128
>d2cqca1 d.58.7.1 (A:109-191) Arginine/serine-rich splicing factor 10 {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.55 E-value=0.028 Score=36.07 Aligned_cols=45 Identities=13% Similarity=0.142 Sum_probs=33.8
Q ss_pred CCccccccccchhhhcCCCceeeCccCHHHHHHHHhc---Cccchhhh
Q 025814 67 APVYSLPQYHQAQQLFQRDAQTITPEALESVKAALAS---SDIEHKAE 111 (247)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~a~~al~~---~~~~~~~~ 111 (247)
|.+..+....+..+..+++++||+|.+.++|..|+.. ..+.++.+
T Consensus 34 G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~Ai~~l~g~~~~gr~i 81 (83)
T d2cqca1 34 GPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRI 81 (83)
T ss_dssp SCEEEEEEEECSSSSSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEE
T ss_pred CCCccccccccccccccccceEEEECCHHHHHHHHHHcCCCEECCEEe
Confidence 6666666666666778899999999999999988753 35555543
No 129
>d1b7fa2 d.58.7.1 (A:205-289) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=89.04 E-value=0.053 Score=34.87 Aligned_cols=38 Identities=8% Similarity=0.022 Sum_probs=31.1
Q ss_pred CCCccccccccchhhhcCCCceeeCccCHHHHHHHHhc
Q 025814 66 VAPVYSLPQYHQAQQLFQRDAQTITPEALESVKAALAS 103 (247)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~a~~al~~ 103 (247)
+|.+..+....+.....+++++||+|++.++|.+|+..
T Consensus 30 ~G~i~~~~~~~d~~~g~~~g~afV~f~~~~~A~~Ai~~ 67 (85)
T d1b7fa2 30 YGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISA 67 (85)
T ss_dssp SSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHH
T ss_pred hCCEeeeeeecccccccCceeEEEEECCHHHHHHHHHH
Confidence 36777776666667778899999999999999999864
No 130
>d2cqha1 d.58.7.1 (A:2-81) IGF-II mRNA-binding protein 2 isoform A {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.46 E-value=0.11 Score=32.86 Aligned_cols=41 Identities=12% Similarity=0.108 Sum_probs=32.3
Q ss_pred hcCCCceeeCccCHHHHHHHHh---cC-ccchhhhhhcccccccc
Q 025814 81 LFQRDAQTITPEALESVKAALA---SS-DIEHKAETKKKSIPRKA 121 (247)
Q Consensus 81 ~~~~~~~~v~~~~~~~a~~al~---~~-~~~~~~~~~~~~~~r~~ 121 (247)
...++++||+|.+.++|.+|++ +. .+.|+.+.+..+.+++.
T Consensus 34 ~~~rg~aFV~f~~~~~A~~Ai~~lng~~~~~G~~i~V~~a~~k~~ 78 (80)
T d2cqha1 34 LLKSGYAFVDYPDQNWAIRAIETLSGKVELHGKIMEVDYSVSKKL 78 (80)
T ss_dssp EEETTEEEECCSCHHHHHHHHHHHTTTCEETTEECEEEECCCCCC
T ss_pred ecccceEEEEECCHHHHHHHHHHhCCCeEECCEEEEEEEcCCcCc
Confidence 4568999999999999999885 33 57888888887766543
No 131
>d1wi8a_ d.58.7.1 (A:) Eukaryotic translation initiation factor 4B {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.43 E-value=0.15 Score=33.85 Aligned_cols=42 Identities=14% Similarity=0.044 Sum_probs=33.1
Q ss_pred hhhcCCCceeeCccCHHHHHHHHh--cCccchhhhhhccccccc
Q 025814 79 QQLFQRDAQTITPEALESVKAALA--SSDIEHKAETKKKSIPRK 120 (247)
Q Consensus 79 ~~~~~~~~~~v~~~~~~~a~~al~--~~~~~~~~~~~~~~~~r~ 120 (247)
.....++++||+|++.+++++++. ...+.++.+++..+..+.
T Consensus 52 ~~g~~~g~afV~f~~~e~a~~~~~~~~~~~~gr~l~V~~a~~~~ 95 (104)
T d1wi8a_ 52 NPERLKGFGYAEFEDLDSLLSALSLNEESLGNKRIRVDVADQAQ 95 (104)
T ss_dssp CTTSBCSCEEEEESSHHHHHHHHGGGTCEETTEECEEEECCCCC
T ss_pred cCCCcceeeeEEECCHHHHHHHHHcCCCEECCEEEEEEECCCCC
Confidence 356679999999999999988875 457888888887765543
No 132
>d1wf0a_ d.58.7.1 (A:) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.49 E-value=0.084 Score=34.17 Aligned_cols=40 Identities=10% Similarity=-0.048 Sum_probs=32.5
Q ss_pred cCCCceeeCccCHHHHHHHHhc-Cccchhhhhhcccccccc
Q 025814 82 FQRDAQTITPEALESVKAALAS-SDIEHKAETKKKSIPRKA 121 (247)
Q Consensus 82 ~~~~~~~v~~~~~~~a~~al~~-~~~~~~~~~~~~~~~r~~ 121 (247)
..++++||+|++.+.|.+|+.. +.++++.+.++.+.++..
T Consensus 40 ~~~gfafV~f~~~~~a~~a~~~~~~i~g~~l~v~~a~~k~~ 80 (88)
T d1wf0a_ 40 PFRAFAFVTFADDQIAQSLCGEDLIIKGISVHISNAEPKHN 80 (88)
T ss_dssp SCCSCCEEECSCHHHHHHTTTCEEEETTEEEEEECCCCCCC
T ss_pred ccCceEEEEECCHHHHHHHHhCCCEECCEEeEEEeCCCCCC
Confidence 4689999999999999999864 468888888887765543
No 133
>d1no8a_ d.58.7.1 (A:) Nuclear factor Aly {Mouse (Mus musculus) [TaxId: 10090]}
Probab=86.32 E-value=0.14 Score=32.26 Aligned_cols=48 Identities=4% Similarity=-0.071 Sum_probs=34.0
Q ss_pred CCccccccccchhhhcCCCceeeCccCHHHHHHHHh---cCccchhhhhhcc
Q 025814 67 APVYSLPQYHQAQQLFQRDAQTITPEALESVKAALA---SSDIEHKAETKKK 115 (247)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~a~~al~---~~~~~~~~~~~~~ 115 (247)
|.+..+....+. ...+++++||+|++.++|..|+. +..+.++.+.+..
T Consensus 25 G~v~~~~i~~~~-~g~~~g~afV~f~~~~~A~~Ai~~l~g~~l~g~~l~V~~ 75 (78)
T d1no8a_ 25 GTLKKAAVHYDR-SGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQL 75 (78)
T ss_dssp SCEEEEEESCSS-CCCSCCEEEEEESCHHHHHHHHHHHTTCEETTEECEEEE
T ss_pred CCCeEEEEEEee-ccccceeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEE
Confidence 555555444443 56679999999999999988875 4567777666543
No 134
>d2f9da1 d.58.7.1 (A:12-125) Pre-mRNA branch site protein p14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.24 E-value=0.072 Score=36.19 Aligned_cols=49 Identities=10% Similarity=-0.004 Sum_probs=34.6
Q ss_pred CCccccccccchhhhcCCCceeeCccCHHHHHHHHh---cCccchhhhhhccccc
Q 025814 67 APVYSLPQYHQAQQLFQRDAQTITPEALESVKAALA---SSDIEHKAETKKKSIP 118 (247)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~a~~al~---~~~~~~~~~~~~~~~~ 118 (247)
|.|..+.... ....+|++||+|.+.++|..|+. +..+.++.+.+..+..
T Consensus 32 G~v~~i~~~~---~~~~kG~afV~f~~~~~A~~Ai~~l~g~~~~gr~l~V~~a~~ 83 (114)
T d2f9da1 32 GPIRQIRVGN---TPETRGTAYVVYEDIFDAKNACDHLSGFNVCNRYLVVLYYNA 83 (114)
T ss_dssp SCEEEEEEEC---STTTTTEEEEEESSHHHHHHHHHHHTTCEETTEECEEEECCH
T ss_pred CCeEeecccc---cCCcCCeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCC
Confidence 5555543332 23458999999999999888874 5678888888766543
No 135
>d1wg5a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=85.65 E-value=0.21 Score=33.24 Aligned_cols=43 Identities=19% Similarity=0.020 Sum_probs=33.8
Q ss_pred hhhhcCCCceeeCccCHHHHHHHHhc--Cccchhhhhhccccccc
Q 025814 78 AQQLFQRDAQTITPEALESVKAALAS--SDIEHKAETKKKSIPRK 120 (247)
Q Consensus 78 ~~~~~~~~~~~v~~~~~~~a~~al~~--~~~~~~~~~~~~~~~r~ 120 (247)
......++++||.|++.+++.+++.. ..+.++.+.+.....++
T Consensus 51 ~~~~~~kG~afV~F~~~e~a~~a~~~~~~~i~gR~i~V~~~~~~~ 95 (104)
T d1wg5a_ 51 DFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAE 95 (104)
T ss_dssp CSSSCBCSEEEEEESSHHHHHHHHTTTTCCSSSSCCEEEEECTTT
T ss_pred CCCCCcceEEEEEeCCHHHHHHHHhhCCCEEcceEEEEEECCHHH
Confidence 34556799999999999999999863 47888888887665543
No 136
>d2cpya1 d.58.7.1 (A:536-638) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=84.97 E-value=0.2 Score=33.22 Aligned_cols=36 Identities=0% Similarity=-0.096 Sum_probs=27.5
Q ss_pred hhhhcCCCceeeCccCHHHHHHHHhcC--ccchhhhhh
Q 025814 78 AQQLFQRDAQTITPEALESVKAALASS--DIEHKAETK 113 (247)
Q Consensus 78 ~~~~~~~~~~~v~~~~~~~a~~al~~~--~~~~~~~~~ 113 (247)
.....++|++||.|.+.++|.+||... .+.++.+.+
T Consensus 44 ~~~g~~~G~afV~F~s~~~a~~Al~~n~~~i~gr~i~V 81 (103)
T d2cpya1 44 DNNGQGLGQALVQFKNEDDARKSERLHRKKLNGREAFV 81 (103)
T ss_dssp CTTSSCSSCEEEECSSHHHHHHHGGGCSEEETTEEEEE
T ss_pred CCCCCcCccEEEEECCHHHHHHHHhcCCCeECCcEEEE
Confidence 346678999999999999999999643 455555444
No 137
>d1jmta_ d.58.7.3 (A:) U2AF35 (35 KDa subunit) {Human (Homo sapiens) [TaxId: 9606]}
Probab=84.82 E-value=0.12 Score=34.66 Aligned_cols=47 Identities=6% Similarity=-0.096 Sum_probs=35.2
Q ss_pred CCCccccccccchhhhcCCCceeeCccCHHHHHHHHh---cCccchhhhhh
Q 025814 66 VAPVYSLPQYHQAQQLFQRDAQTITPEALESVKAALA---SSDIEHKAETK 113 (247)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~a~~al~---~~~~~~~~~~~ 113 (247)
+|.+..+....+ .+..++|++||.|++.++|.+|+. +..++++.+.+
T Consensus 51 ~G~I~~v~I~~~-~~~~~~G~~fV~f~~~~~A~~Ai~~lng~~~~gr~i~v 100 (104)
T d1jmta_ 51 YGEVEEMNVCDN-LGDHLVGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHA 100 (104)
T ss_dssp TCCEEEEEECCS-SSSSSEEEEEEEESCHHHHHHHHHHHTTCEETTEECCE
T ss_pred CCCEEEEEeecC-CCCCEeeEEEEEEechhHHHHHHHHHCCCEECCEEEEE
Confidence 377777665443 467789999999999999988875 45677776655
No 138
>d2cqia1 d.58.7.1 (A:1-90) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=83.68 E-value=0.19 Score=32.42 Aligned_cols=49 Identities=16% Similarity=0.020 Sum_probs=33.9
Q ss_pred CCccccccccchhhhcCCCceeeCccCHHHHHHHHh---cCccchhhhhhcccc
Q 025814 67 APVYSLPQYHQAQQLFQRDAQTITPEALESVKAALA---SSDIEHKAETKKKSI 117 (247)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~a~~al~---~~~~~~~~~~~~~~~ 117 (247)
|.+..+....+... .++++||+|++.++|..|+. +..+.++.+++..+.
T Consensus 33 G~i~~v~i~~d~~~--~~~~afV~f~~~~~A~~A~~~l~~~~~~g~~i~v~~a~ 84 (90)
T d2cqia1 33 GPCKSCKMITEHTS--NDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWAT 84 (90)
T ss_dssp SCEEEEEEECCCCS--SCCEEEEEESSHHHHHHHHHHHTTEEETTEEEEEEECC
T ss_pred CCceeeeeecccCc--cceeeEEEECCHHHHHHHHHHcCCCEECCEEEEEEEcC
Confidence 45544444433332 38899999999999999875 346788887776654
No 139
>d2cpda1 d.58.7.1 (A:223-308) APOBEC1 stimulating protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=83.66 E-value=0.24 Score=31.54 Aligned_cols=39 Identities=13% Similarity=0.023 Sum_probs=30.4
Q ss_pred hcCCCceeeCccCHHHHHHHHhc---Cccchhhhhhcccccc
Q 025814 81 LFQRDAQTITPEALESVKAALAS---SDIEHKAETKKKSIPR 119 (247)
Q Consensus 81 ~~~~~~~~v~~~~~~~a~~al~~---~~~~~~~~~~~~~~~r 119 (247)
...++++||+|.+.++|..|+.. ..+.++.+.+..+.++
T Consensus 41 ~~~rg~afV~f~~~~~A~~Ai~~l~~~~i~g~~i~V~~akP~ 82 (86)
T d2cpda1 41 KKIRDYAFVHFSNREDAVEAMKALNGKVLDGSPIEVTLAKPV 82 (86)
T ss_dssp EECSSEEEEEESSHHHHHHHHHHHSSEEETTEEEEEECCCCC
T ss_pred ccccEEEEEEeCCHHHHHHHHHHcCCCEECCEEEEEEeccCC
Confidence 45699999999999999998763 4678888877665543
No 140
>d1zh5a2 d.58.7.1 (A:105-189) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=83.36 E-value=0.12 Score=33.21 Aligned_cols=46 Identities=9% Similarity=0.063 Sum_probs=32.7
Q ss_pred CCccccccccchhhhcCCCceeeCccCHHHHHHHHhcC--ccchhhhhh
Q 025814 67 APVYSLPQYHQAQQLFQRDAQTITPEALESVKAALASS--DIEHKAETK 113 (247)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~a~~al~~~--~~~~~~~~~ 113 (247)
|.+..+....+ .....+|++||+|++.++|.+||+.. .+.++.+.+
T Consensus 31 G~v~~v~l~~~-~~~~~kG~afV~f~~~e~a~~al~~~~~~~~g~~l~v 78 (85)
T d1zh5a2 31 GQVLNIQMRRT-LHKAFKGSIFVVFDSIESAKKFVETPGQKYKETDLLI 78 (85)
T ss_dssp CCEEEEEEEEC-TTCCEEEEEEEEESCHHHHHHHHTCCCCEETTEECEE
T ss_pred cccccceeeee-ccCCcceEEEEEEcCHHHHHHHHHHCCCEECCEEEEE
Confidence 66666554433 35667899999999999999999643 455555554
No 141
>d2disa1 d.58.7.1 (A:8-103) Hypothetical protein FLJ20273 {Human (Homo sapiens) [TaxId: 9606]}
Probab=83.18 E-value=0.44 Score=30.93 Aligned_cols=41 Identities=10% Similarity=-0.010 Sum_probs=31.3
Q ss_pred hhcCCCceeeCccCHHHHHHHHhcC-----ccchhhhhhccccccc
Q 025814 80 QLFQRDAQTITPEALESVKAALASS-----DIEHKAETKKKSIPRK 120 (247)
Q Consensus 80 ~~~~~~~~~v~~~~~~~a~~al~~~-----~~~~~~~~~~~~~~r~ 120 (247)
...++|++||+|++.++|..|+... .+.++.+.+..+.++.
T Consensus 41 ~~~~rg~aFV~F~~~~~A~~Ai~~l~~~~~~~~g~~i~V~~A~p~~ 86 (96)
T d2disa1 41 KMKNRGFAFVEYESHRAAAMARRKLMPGRIQLWGHQIAVDWAEPEI 86 (96)
T ss_dssp TTTTCCEEEEEESSHHHHHHHHTTTTTCCSCBTTBCCEEEESCSSC
T ss_pred cccCCCeEEEEEcCHHHHHHHHHHHcCCCeEECCEEEEEEEcCCCC
Confidence 5678999999999999999998643 3356777776665443
No 142
>d1fxla2 d.58.7.1 (A:119-203) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=83.08 E-value=0.15 Score=32.64 Aligned_cols=43 Identities=7% Similarity=-0.044 Sum_probs=33.0
Q ss_pred CCccccccccchhhhcCCCceeeCccCHHHHHHHHhc---Cccchh
Q 025814 67 APVYSLPQYHQAQQLFQRDAQTITPEALESVKAALAS---SDIEHK 109 (247)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~a~~al~~---~~~~~~ 109 (247)
|.+..+....+......++++||+|++.+++.+|++. ..+.++
T Consensus 31 G~v~~v~i~~d~~~g~~kg~afV~f~~~~~a~~Ai~~lng~~~~G~ 76 (85)
T d1fxla2 31 GRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGA 76 (85)
T ss_dssp SCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCCCTTC
T ss_pred CCccccccccccccccCCCeeEEEEcCHHHHHHHHHHhCCCEeCCC
Confidence 6777776666667778899999999999999998753 445443
No 143
>d1weya_ d.58.7.1 (A:) Calcipressin-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=82.99 E-value=0.5 Score=31.39 Aligned_cols=43 Identities=9% Similarity=-0.133 Sum_probs=33.3
Q ss_pred hcCCCceeeCccCHHHHHHHHhc---CccchhhhhhcccccccccC
Q 025814 81 LFQRDAQTITPEALESVKAALAS---SDIEHKAETKKKSIPRKAAG 123 (247)
Q Consensus 81 ~~~~~~~~v~~~~~~~a~~al~~---~~~~~~~~~~~~~~~r~~~~ 123 (247)
..+++++||+|++.++|.+|+.. ..+.++.+.+..+..+....
T Consensus 43 ~k~~~~afV~f~~~~~A~~Ai~~lng~~~~g~~l~v~~a~~~~~~~ 88 (104)
T d1weya_ 43 FKSFKRVRINFSNPLSAADARLRLHKTEFLGKEMKLYFAQTLHIGS 88 (104)
T ss_dssp ETTTTEEEEECSSTTHHHHHHHTSTTSEETTEECEEECCCCSSCCS
T ss_pred ecCCCEEEEEECCHHHHHHHHHHhcccccCCCEeEEeecccCCCCC
Confidence 34688999999998888888764 57889999888776554433
No 144
>d1x4aa1 d.58.7.1 (A:9-103) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=82.87 E-value=0.34 Score=31.49 Aligned_cols=38 Identities=8% Similarity=-0.154 Sum_probs=30.2
Q ss_pred hcCCCceeeCccCHHHHHHHHh---cCccchhhhhhccccc
Q 025814 81 LFQRDAQTITPEALESVKAALA---SSDIEHKAETKKKSIP 118 (247)
Q Consensus 81 ~~~~~~~~v~~~~~~~a~~al~---~~~~~~~~~~~~~~~~ 118 (247)
...++++||+|++.+++..|+. +..+.++.+.+..+..
T Consensus 50 ~~~~g~afV~f~~~e~a~~Ai~~l~g~~~~g~~l~V~~a~~ 90 (95)
T d1x4aa1 50 RGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRS 90 (95)
T ss_dssp SSSSCCEEEEESCHHHHHHHHHHHTTCEETTEECEEECCCC
T ss_pred ccccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEeccC
Confidence 3458999999999999988864 5678888888876554
No 145
>d1wf2a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoproteins C1/C2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=82.62 E-value=0.26 Score=32.40 Aligned_cols=36 Identities=11% Similarity=0.025 Sum_probs=29.8
Q ss_pred CCCceeeCccCHHHHHHHHh---cCccchhhhhhccccc
Q 025814 83 QRDAQTITPEALESVKAALA---SSDIEHKAETKKKSIP 118 (247)
Q Consensus 83 ~~~~~~v~~~~~~~a~~al~---~~~~~~~~~~~~~~~~ 118 (247)
.++++||+|++.++|.+|+. +..+.++.+.+..+..
T Consensus 49 ~rg~aFV~f~~~~~A~~Ai~~lng~~~~g~~l~V~~a~~ 87 (98)
T d1wf2a_ 49 HKGFAFVQYVNERNARAAVAGEDGRMIAGQVLDINLAAE 87 (98)
T ss_dssp ETEEEEEEESSHHHHHHHHHTTTTCEETTEECEEEETTS
T ss_pred eCCeEEEEECCHHHHHHHHHHcCCCEECCEEEEEEECCC
Confidence 58999999999999999975 4578888888877643
No 146
>d2cpia1 d.58.7.1 (A:101-189) E3 ubiquitin protein ligase CNOT4 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=82.44 E-value=0.21 Score=32.23 Aligned_cols=49 Identities=6% Similarity=-0.027 Sum_probs=33.1
Q ss_pred CCCCCccccccccchhhhc---CCCceeeCccCHHHHHHHHh---cCccchhhhh
Q 025814 64 APVAPVYSLPQYHQAQQLF---QRDAQTITPEALESVKAALA---SSDIEHKAET 112 (247)
Q Consensus 64 ~P~~~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~a~~al~---~~~~~~~~~~ 112 (247)
..+|.+..+....+..... .++++||+|++.++|.+|+. +..+.++.++
T Consensus 33 ~~~G~I~~v~i~~~~~~~~~~~~~g~aFV~f~~~~~A~~Ai~~lng~~~~gr~lk 87 (89)
T d2cpia1 33 GKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVVVDGRTLK 87 (89)
T ss_dssp TTTSCEEEEEEECCSSCCSSSCCCEEEEEEESSHHHHHHHHHHHTTEEETTEEEE
T ss_pred cccCCceEEEEeeccCcCCCCCcceEEEEecccchhHHHHHHHhCCCEECCEEEE
Confidence 3457777766655544333 35789999999999998875 3456666554
No 147
>d1x5oa1 d.58.7.1 (A:8-108) RNA-binding motif, single-stranded-interacting protein 1, RBMS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=81.27 E-value=0.31 Score=32.14 Aligned_cols=47 Identities=15% Similarity=0.063 Sum_probs=32.1
Q ss_pred CCccccccccchhhhcCCCceeeCccCHHHHHHHHh---cCccchhhhhhc
Q 025814 67 APVYSLPQYHQAQQLFQRDAQTITPEALESVKAALA---SSDIEHKAETKK 114 (247)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~a~~al~---~~~~~~~~~~~~ 114 (247)
|.+..+....+ ....+++++||+|++.++|.+|+. +..+.++.+.+.
T Consensus 43 G~i~~~~~~~~-~~~~~~g~afV~f~~~~~A~~Ai~~lng~~i~gr~~~v~ 92 (101)
T d1x5oa1 43 GQVISTRILRD-SSGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSA 92 (101)
T ss_dssp SCEEEEEEEEC-SSSCEEEEEEEEESCHHHHHHHHHHHBTCCCCCCTTSCC
T ss_pred ccccceeeecc-cccccccceeEEeCCHHHHHHHHHHhCCCEECCcCCccC
Confidence 55544433333 355678999999999999988864 456666666553
No 148
>d1weza_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=81.18 E-value=0.21 Score=33.10 Aligned_cols=41 Identities=12% Similarity=0.035 Sum_probs=32.4
Q ss_pred hhcCCCceeeCccCHHHHHHHHhc--Cccchhhhhhccccccc
Q 025814 80 QLFQRDAQTITPEALESVKAALAS--SDIEHKAETKKKSIPRK 120 (247)
Q Consensus 80 ~~~~~~~~~v~~~~~~~a~~al~~--~~~~~~~~~~~~~~~r~ 120 (247)
....++++||.|++.++|.+|+.. ..+.++.+++.....+.
T Consensus 51 ~g~~~G~afVeF~~~~~a~~Al~~~~~~i~gR~I~V~~s~~~~ 93 (102)
T d1weza_ 51 DGRVTGEADVEFATHEDAVAAMAKDKANMQHRYVELFLNSTAG 93 (102)
T ss_dssp SSCEEEEEEEECSSSHHHHHHHTTSSCCSSSSCCEEEEECCCC
T ss_pred CCcceEEEEEEECCHHHHHHHHHcCCCEECCEEEEEEEcCCCC
Confidence 456689999999999999999864 47888888887665443
No 149
>d1wela1 d.58.7.1 (A:412-523) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=80.57 E-value=0.2 Score=33.89 Aligned_cols=42 Identities=10% Similarity=-0.081 Sum_probs=30.0
Q ss_pred cccchhhhcCCCceeeCccCHHHHHHHHhc--Cccchhhhhhcc
Q 025814 74 QYHQAQQLFQRDAQTITPEALESVKAALAS--SDIEHKAETKKK 115 (247)
Q Consensus 74 ~~~~~~~~~~~~~~~v~~~~~~~a~~al~~--~~~~~~~~~~~~ 115 (247)
..........+|++||.|.+.+++.+||.. ..+.++.+.+..
T Consensus 50 ~~~~~~~g~~~G~afVeF~~~e~a~~al~~~~~~i~gR~i~V~~ 93 (112)
T d1wela1 50 YIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVHP 93 (112)
T ss_dssp EEEECTTSSEEEEEEEEBSSSHHHHHHHTSCSBCSTTSCBEEEE
T ss_pred eeecCcccceeeEEEEEECCHHHHHHHHHcCCCcCCCEEEEEEE
Confidence 334445667799999999999999999853 356666655533
No 150
>d1wg1a_ d.58.7.1 (A:) Probable RNA-binding protein KIAA1579 {Human (Homo sapiens) [TaxId: 9606]}
Probab=79.45 E-value=0.52 Score=30.15 Aligned_cols=37 Identities=11% Similarity=-0.055 Sum_probs=30.2
Q ss_pred hcCCCceeeCccCHHHHHHHHh---cCccchhhhhhcccc
Q 025814 81 LFQRDAQTITPEALESVKAALA---SSDIEHKAETKKKSI 117 (247)
Q Consensus 81 ~~~~~~~~v~~~~~~~a~~al~---~~~~~~~~~~~~~~~ 117 (247)
...++++||+|++.++|.+|+. +..+.++.+.+....
T Consensus 37 ~~~kg~afV~f~~~~~A~~Ai~~ln~~~~~G~~l~V~~a~ 76 (88)
T d1wg1a_ 37 DRNKRTAFVTLLNGEQAQNAIQMFHQYSFRGKDLIVQLQP 76 (88)
T ss_dssp EGGGTEEEECCSCHHHHHHHHHHHTTEEETTEEEEEEECC
T ss_pred eccCCceEEEECCHHHHHHHHHHhCCCEECCEEEEEEEcC
Confidence 4568999999999999998875 457889988887654
No 151
>d1fjca_ d.58.7.1 (A:) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=79.16 E-value=0.27 Score=32.09 Aligned_cols=41 Identities=7% Similarity=0.024 Sum_probs=32.7
Q ss_pred hhcCCCceeeCccCHHHHHHHHh---cCccchhhhhhccccccc
Q 025814 80 QLFQRDAQTITPEALESVKAALA---SSDIEHKAETKKKSIPRK 120 (247)
Q Consensus 80 ~~~~~~~~~v~~~~~~~a~~al~---~~~~~~~~~~~~~~~~r~ 120 (247)
....++++||+|.+.++|.+|+. +..+.++.+.+..+.++.
T Consensus 49 ~~~~~~~afV~f~~~~~A~~A~~~l~~~~~~gr~i~V~~a~~k~ 92 (96)
T d1fjca_ 49 DGKSKGIAYIEFKSEADAEKNLEEKQGAEIDGRSVSLYYTGEKG 92 (96)
T ss_dssp TTEEEEEEEEEESSHHHHHHHHHHTTEEEETTEEEEEEECSSSC
T ss_pred cCccccEEEEEeCCHHHHHHHHHHcCCCEECCEEEEEEEeCCCC
Confidence 44568999999999999999885 347888888887766554
No 152
>d2adca1 d.58.7.1 (A:335-443) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=79.10 E-value=0.84 Score=30.08 Aligned_cols=35 Identities=9% Similarity=0.054 Sum_probs=28.8
Q ss_pred CCceeeCccCHHHHHHHHh---cCccchhhhhhccccc
Q 025814 84 RDAQTITPEALESVKAALA---SSDIEHKAETKKKSIP 118 (247)
Q Consensus 84 ~~~~~v~~~~~~~a~~al~---~~~~~~~~~~~~~~~~ 118 (247)
+|++||.|++.++|.+|+. +..+.++.+.+..+..
T Consensus 40 kg~afV~f~~~~~A~~ai~~lng~~l~g~~l~v~~s~~ 77 (109)
T d2adca1 40 KENALVQMADGNQAQLAMSHLNGHKLHGKPIRITLSKH 77 (109)
T ss_dssp SCCEEEEESCHHHHHHHHHHHTTCBCSSSBCEEECCSC
T ss_pred cceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCC
Confidence 7899999999999998885 4578888888877643
No 153
>d2bz2a1 d.58.7.1 (A:35-113) Negative elongation factor E, NELF-E {Human (Homo sapiens) [TaxId: 9606]}
Probab=78.47 E-value=0.63 Score=28.95 Aligned_cols=36 Identities=22% Similarity=0.212 Sum_probs=28.1
Q ss_pred cCCCceeeCccCHHHHHHHHh---cCccchhhhhhcccc
Q 025814 82 FQRDAQTITPEALESVKAALA---SSDIEHKAETKKKSI 117 (247)
Q Consensus 82 ~~~~~~~v~~~~~~~a~~al~---~~~~~~~~~~~~~~~ 117 (247)
..++++||+|++.++|..|+. +..+.++.+.+..+.
T Consensus 37 ~~~~~afV~f~~~~~A~~Ai~~lng~~~~g~~l~V~~a~ 75 (79)
T d2bz2a1 37 PPRNCAFVTYEKMESADQAVAELNGTQVESVQLKVNIAR 75 (79)
T ss_dssp TTTTEEEEECSSHHHHHHHHHHHTTCBCSSCBCEEEECC
T ss_pred cCCCEEEEEEcccHHHHHHHHHhCCCEECCEEEEEEEec
Confidence 358899999999999988874 457788877776553
No 154
>d1nu4a_ d.58.7.1 (A:) Splicesomal U1A protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=78.16 E-value=0.52 Score=30.25 Aligned_cols=38 Identities=16% Similarity=0.047 Sum_probs=29.6
Q ss_pred hhcCCCceeeCccCHHHHHHHHh---cCccchhhhhhcccc
Q 025814 80 QLFQRDAQTITPEALESVKAALA---SSDIEHKAETKKKSI 117 (247)
Q Consensus 80 ~~~~~~~~~v~~~~~~~a~~al~---~~~~~~~~~~~~~~~ 117 (247)
...+++++||+|++.++|..|+. +..+.++.+.+..+.
T Consensus 42 ~~~~~g~afV~F~~~~~A~~A~~~~~~~~~~g~~l~v~~ak 82 (91)
T d1nu4a_ 42 SLKMRGQAFVIFKEVSSATNALRSMQGFPFYDKPMRIQYAK 82 (91)
T ss_dssp HHHHTTCEEEEESSHHHHHHHHHHHTTCEETTEECEEEECS
T ss_pred eccCCCceEEEECCHHHHHHHHHHhCCCEECCEEEEEEEeC
Confidence 44569999999999999999985 346778777776554
No 155
>d2cqpa1 d.58.7.1 (A:917-1002) RNA-binding protein 12 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=77.51 E-value=0.35 Score=30.69 Aligned_cols=35 Identities=11% Similarity=0.113 Sum_probs=27.7
Q ss_pred hhhcCCCceeeCccCHHHHHHHHhc---Cccchhhhhh
Q 025814 79 QQLFQRDAQTITPEALESVKAALAS---SDIEHKAETK 113 (247)
Q Consensus 79 ~~~~~~~~~~v~~~~~~~a~~al~~---~~~~~~~~~~ 113 (247)
.+..+++++||.|++.++|.+|+.. ..+.++.+++
T Consensus 46 ~~g~~~G~afV~f~~~e~a~~Ai~~l~~~~l~gr~i~v 83 (86)
T d2cqpa1 46 EKGMPTGEAMVAFESRDEATAAVIDLNDRPIGSRKVKL 83 (86)
T ss_dssp SSSCEEEEEEEEESCHHHHHHHHHHTTTCEETTEECEE
T ss_pred CCCCcceEEEEEEcCcHHHHHHHHHcCCCEECCEEEEE
Confidence 4566799999999999999998754 4677776655
No 156
>d2adca2 d.58.7.1 (A:444-531) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=76.76 E-value=0.71 Score=29.26 Aligned_cols=34 Identities=24% Similarity=0.217 Sum_probs=25.3
Q ss_pred CCCceeeCccCHHHHHHHHhc---Ccc-chhhhhhccc
Q 025814 83 QRDAQTITPEALESVKAALAS---SDI-EHKAETKKKS 116 (247)
Q Consensus 83 ~~~~~~v~~~~~~~a~~al~~---~~~-~~~~~~~~~~ 116 (247)
.++++||+|++.++|.+|+.. ..+ +++.+++..+
T Consensus 47 ~~~~afV~f~~~~~A~~A~~~l~~~~i~~g~~l~v~~s 84 (88)
T d2adca2 47 DRKMALIQMGSVEEAVQALIDLHNHDLGENHHLRVSFS 84 (88)
T ss_dssp STTCEEEEESSHHHHHHHHHHHTTCBSSSSCBCEEEEC
T ss_pred ccceeEEEECCHHHHHHHHHhccCCEecCCCEEEEEeC
Confidence 488999999999999999853 344 4566665443
No 157
>d3begb1 d.58.7.1 (B:121-207) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=76.48 E-value=1.1 Score=28.41 Aligned_cols=38 Identities=5% Similarity=0.054 Sum_probs=29.3
Q ss_pred cCCCceeeCccCHHHHHHHHh---cCccchhhhhhcccccc
Q 025814 82 FQRDAQTITPEALESVKAALA---SSDIEHKAETKKKSIPR 119 (247)
Q Consensus 82 ~~~~~~~v~~~~~~~a~~al~---~~~~~~~~~~~~~~~~r 119 (247)
..++++||+|++.++|..|+. +..+.++.+.+.....+
T Consensus 33 ~~~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~i~v~~~~~~ 73 (87)
T d3begb1 33 YRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 73 (87)
T ss_dssp CTTSEEEEEESSHHHHHHHHHHHTTCBCCCTTSCCCBCEEE
T ss_pred cccceeeEEeCCHHHHHHHHHHhCCCEECCcEeEEeEEecC
Confidence 346899999999999988874 56788888877665433
No 158
>d1whxa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=76.40 E-value=0.56 Score=31.11 Aligned_cols=34 Identities=9% Similarity=-0.090 Sum_probs=27.7
Q ss_pred CCCceeeCccCHHHHHHHHh---cCccchhhhhhccc
Q 025814 83 QRDAQTITPEALESVKAALA---SSDIEHKAETKKKS 116 (247)
Q Consensus 83 ~~~~~~v~~~~~~~a~~al~---~~~~~~~~~~~~~~ 116 (247)
+++++||+|++.++|.+|+. +..+.++.+.+..+
T Consensus 45 ~kg~afV~f~~~~~A~~A~~~lng~~~~gr~l~v~~a 81 (111)
T d1whxa_ 45 GGITAIVEFLEPLEARKAFRHLAYSKFHHVPLYLEWA 81 (111)
T ss_dssp SSSCEEEEESCHHHHHHHHHHHTTCBSSSSBCEEEEE
T ss_pred cCceEEEEEcCHHHHHHHHHHHcCCccCCCeEEEEEC
Confidence 58999999999999999864 56788888777554
No 159
>d2cpja1 d.58.7.1 (A:65-150) Non-POU domain-containing octamer-binding protein, NonO {Mouse (Mus musculus) [TaxId: 10090]}
Probab=75.73 E-value=0.66 Score=29.45 Aligned_cols=37 Identities=11% Similarity=-0.049 Sum_probs=28.2
Q ss_pred cCCCceeeCccCHHHHHHHHh---cCccchhhhhhccccc
Q 025814 82 FQRDAQTITPEALESVKAALA---SSDIEHKAETKKKSIP 118 (247)
Q Consensus 82 ~~~~~~~v~~~~~~~a~~al~---~~~~~~~~~~~~~~~~ 118 (247)
..++++||+|++.++|..|+. +..+.++.+.+..+..
T Consensus 42 ~~k~~afV~f~~~~~A~~A~~~l~g~~i~g~~l~V~~A~~ 81 (86)
T d2cpja1 42 KDKGFGFIRLETRTLAEIAKVELDNMPLRGKQLRVRFACH 81 (86)
T ss_dssp TTTTEEEEECSSSHHHHHHHHHHTTCCBTTBCCEEEESSC
T ss_pred cccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCC
Confidence 358999999999888888765 5678888877766543
No 160
>d1wi6a1 d.58.7.1 (A:69-143) Ribonucleoprotein PTB-binding 1, Raver-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=75.73 E-value=0.58 Score=28.89 Aligned_cols=37 Identities=14% Similarity=0.036 Sum_probs=28.8
Q ss_pred hhcCCCceeeCccCHHHHHHHHh---cCccchhhhhhccc
Q 025814 80 QLFQRDAQTITPEALESVKAALA---SSDIEHKAETKKKS 116 (247)
Q Consensus 80 ~~~~~~~~~v~~~~~~~a~~al~---~~~~~~~~~~~~~~ 116 (247)
....++++||+|++.++|.+|++ +..++++.+.+..+
T Consensus 29 ~~~~~g~afv~f~~~~~A~~Ai~~ln~~~~~g~~l~V~~a 68 (75)
T d1wi6a1 29 VDKYKGTAFVTLLNGEQAEAAINTFHQSRLRERELSVQLQ 68 (75)
T ss_dssp EETTTTEEEEEESSHHHHHHHHHHHTTEESSSCEEEEEEC
T ss_pred ecccceeEEEEECCHHHHHHHHHHhCCccCCCCEEEEEEe
Confidence 45679999999999999998875 45777877776554
No 161
>d1x4ga1 d.58.7.1 (A:8-103) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=75.49 E-value=0.63 Score=30.25 Aligned_cols=34 Identities=15% Similarity=0.074 Sum_probs=26.8
Q ss_pred CCCceeeCccCHHHHHHHHh---cCccchhhhhhccc
Q 025814 83 QRDAQTITPEALESVKAALA---SSDIEHKAETKKKS 116 (247)
Q Consensus 83 ~~~~~~v~~~~~~~a~~al~---~~~~~~~~~~~~~~ 116 (247)
.++++||.|++.++|..|+. +..+.++.+++..+
T Consensus 53 ~kg~afV~f~~~~~A~~Ai~~l~~~~i~g~~l~v~~a 89 (96)
T d1x4ga1 53 EKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWG 89 (96)
T ss_dssp TTTEEEEEESSHHHHHHHHHHHTTCEETTEECEEECC
T ss_pred cceEEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEc
Confidence 48999999999999999875 45677777766544
No 162
>d1wexa_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein L-like {Mouse (Mus musculus) [TaxId: 10090]}
Probab=75.12 E-value=1.4 Score=28.85 Aligned_cols=37 Identities=14% Similarity=0.031 Sum_probs=28.6
Q ss_pred cCCCceeeCccCHHHHHHHHhc-----Cccchhhhhhccccc
Q 025814 82 FQRDAQTITPEALESVKAALAS-----SDIEHKAETKKKSIP 118 (247)
Q Consensus 82 ~~~~~~~v~~~~~~~a~~al~~-----~~~~~~~~~~~~~~~ 118 (247)
..++++||.|++.++|..|+.. ..+.++.+.+.....
T Consensus 49 ~~k~~AfV~f~~~e~A~~ai~~~~~~~~~~~g~~l~v~~s~~ 90 (104)
T d1wexa_ 49 PFKRQALVEFENIDSAKECVTFAADVPVYIAGQQAFFNYSTS 90 (104)
T ss_dssp TTTTEEEEEESSHHHHHHHHHHHHHSCCBSSSSBCEEEECSS
T ss_pred ecceeEEEEeCCHHHHHHHHHHHcCCCcEEeeEEEEEEEcCC
Confidence 3589999999999999999853 245677777766644
No 163
>d1u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=72.93 E-value=0.21 Score=32.17 Aligned_cols=39 Identities=8% Similarity=0.072 Sum_probs=29.9
Q ss_pred chhhhcCCCceeeCccCHHHHHHHHh--cCccchhhhhhcc
Q 025814 77 QAQQLFQRDAQTITPEALESVKAALA--SSDIEHKAETKKK 115 (247)
Q Consensus 77 ~~~~~~~~~~~~v~~~~~~~a~~al~--~~~~~~~~~~~~~ 115 (247)
+.+...+++++||+|.+.+++..|+. +..+.++.+.+++
T Consensus 41 ~~~~~~~kg~afV~f~~~e~a~~a~~l~g~~~~Gr~l~V~r 81 (90)
T d1u2fa_ 41 AVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRR 81 (90)
T ss_dssp ECCEETTTTEEEEEESSCTTTTTGGGGSSCCSSSSCCCCBC
T ss_pred ecccCCCceEEEEEeCCHHHHHHHHhhCCcEECCEEEEECC
Confidence 34456679999999999888888764 4577888887753
No 164
>d2cq1a1 d.58.7.1 (A:51-138) Polypyrimidine tract-binding protein 2, PTBP2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=72.56 E-value=0.89 Score=28.80 Aligned_cols=36 Identities=6% Similarity=-0.021 Sum_probs=27.3
Q ss_pred cCCCceeeCccCHHHHHHHHhc-----Cccchhhhhhcccc
Q 025814 82 FQRDAQTITPEALESVKAALAS-----SDIEHKAETKKKSI 117 (247)
Q Consensus 82 ~~~~~~~v~~~~~~~a~~al~~-----~~~~~~~~~~~~~~ 117 (247)
..++++||+|++.++|..|++. ..+.++.+.+..+.
T Consensus 42 ~~~~~afV~f~~~e~A~~a~~~~~~~~~~~~g~~l~v~~sk 82 (88)
T d2cq1a1 42 KGKNQAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSN 82 (88)
T ss_dssp TTTTEEEEEESSHHHHHHHHHHHHHSCCEETTEECEEEECS
T ss_pred ccceEEEEEeCCHHHHHHHHHHHccCCCccCCCEEEEEECC
Confidence 3579999999999999999763 35677777665543
No 165
>d1x4fa1 d.58.7.1 (A:8-106) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=71.34 E-value=1.2 Score=29.03 Aligned_cols=36 Identities=14% Similarity=0.001 Sum_probs=27.7
Q ss_pred cCCCceeeCccCHHHHHHHHh---cC--ccchhhhhhcccc
Q 025814 82 FQRDAQTITPEALESVKAALA---SS--DIEHKAETKKKSI 117 (247)
Q Consensus 82 ~~~~~~~v~~~~~~~a~~al~---~~--~~~~~~~~~~~~~ 117 (247)
..++++||.|++.++|.+|++ .. .+.++.+.+..+.
T Consensus 53 ~~k~~afV~f~~~~~A~~Ai~~~~~~~~~~~gr~l~V~~s~ 93 (99)
T d1x4fa1 53 RMKSQAFIEMETREDAMAMVDHCLKKALWFQGRCVKVDLSE 93 (99)
T ss_dssp TTTTEEEEECSSHHHHHHHHHHHHHSCCCSSSSCCEEEEEC
T ss_pred ecCCcEEEEecchHHHHHHHHHHhcCCceECCEEEEEEEcC
Confidence 358999999999999999975 22 5677777776553
No 166
>d2ghpa2 d.58.7.1 (A:41-115) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=69.83 E-value=0.79 Score=28.23 Aligned_cols=46 Identities=9% Similarity=0.041 Sum_probs=30.6
Q ss_pred CCccccccccchhhhcCCCceeeCccCHHHHHHHHhc--Cccchhhhhhc
Q 025814 67 APVYSLPQYHQAQQLFQRDAQTITPEALESVKAALAS--SDIEHKAETKK 114 (247)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~a~~al~~--~~~~~~~~~~~ 114 (247)
|.+..+....+.. ..++++||+|++.++|.+|+.. ..++++.+.+.
T Consensus 25 G~I~~v~~~~~~~--~~~~~afV~F~~~~~a~~Al~~~~~~i~g~~i~V~ 72 (75)
T d2ghpa2 25 GPIIHVDVADSLK--KNFRFARIEFARYDGALAAITKTHKVVGQNEIIVS 72 (75)
T ss_dssp SCEEEEEEEECTT--SSSEEEEEEESSHHHHHHHHTTTTCEETTEECEEE
T ss_pred CceEEEEEEeecc--ccceEEEEEEcchHHhHHHHHhcCcEECCEEEEEE
Confidence 5555554444333 2356999999999999999864 35666655443
No 167
>d1wg4a_ d.58.7.1 (A:) Splicing factor, arginine/serine-rich 9 (SFRS9) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=67.57 E-value=1.1 Score=29.15 Aligned_cols=38 Identities=8% Similarity=-0.041 Sum_probs=29.9
Q ss_pred cCCCceeeCccCHHHHHHHHh---cCccchhhhhhcccccc
Q 025814 82 FQRDAQTITPEALESVKAALA---SSDIEHKAETKKKSIPR 119 (247)
Q Consensus 82 ~~~~~~~v~~~~~~~a~~al~---~~~~~~~~~~~~~~~~r 119 (247)
..++++||+|.+.+++..|++ +..++++.+.+.....+
T Consensus 48 ~~~g~afV~f~~~~~a~~Ai~~lng~~~~g~~i~v~~~~~~ 88 (98)
T d1wg4a_ 48 QKDGMGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRVY 88 (98)
T ss_dssp ETTTEEEEEESSHHHHHHHHHHHSSEEEECTTSCEEEEEEE
T ss_pred cccceEEEEECCHHHHHHHHHHhCCCEeCCeEEEEEEEecC
Confidence 347999999999999999975 34788888887665443
No 168
>d2dita1 d.58.7.1 (A:8-106) HIV Tat-specific factor 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=65.73 E-value=1.7 Score=28.29 Aligned_cols=35 Identities=6% Similarity=-0.014 Sum_probs=27.9
Q ss_pred cCCCceeeCccCHHHHHHHHh---cCccchhhhhhccc
Q 025814 82 FQRDAQTITPEALESVKAALA---SSDIEHKAETKKKS 116 (247)
Q Consensus 82 ~~~~~~~v~~~~~~~a~~al~---~~~~~~~~~~~~~~ 116 (247)
..+|++||.|++.++|..|+. +..++++.+.+...
T Consensus 55 ~~~G~~fV~f~~~e~A~~A~~~lng~~~~gr~i~v~~~ 92 (99)
T d2dita1 55 HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITAQAW 92 (99)
T ss_dssp CTTCEEEEECSCHHHHHHHHHHSTTCEETTEECEEEEC
T ss_pred CCccEEEEEECCHHHHHHHHHHhCCcEECCEEEEEEEe
Confidence 357999999999999999985 45778888777554
No 169
>d2b0ga1 d.58.7.1 (A:1-83) Splicesomal U1A protein {Drosophila melanogaster [TaxId: 7227]}
Probab=61.77 E-value=2.1 Score=26.54 Aligned_cols=20 Identities=15% Similarity=0.009 Sum_probs=17.6
Q ss_pred CCCceeeCccCHHHHHHHHh
Q 025814 83 QRDAQTITPEALESVKAALA 102 (247)
Q Consensus 83 ~~~~~~v~~~~~~~a~~al~ 102 (247)
.++++||.|++.++|..|+.
T Consensus 44 ~~g~afV~f~~~~~A~~A~~ 63 (83)
T d2b0ga1 44 RHDIAFVEFTTELQSNAAKE 63 (83)
T ss_dssp TCSCEEEEESSHHHHHHHHH
T ss_pred cceeEEEecCCHHHHHHHHH
Confidence 37899999999999999875
No 170
>d1x4da1 d.58.7.1 (A:8-96) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=57.06 E-value=2.7 Score=26.58 Aligned_cols=35 Identities=17% Similarity=0.037 Sum_probs=26.8
Q ss_pred CCCceeeCccCHHHHHHHHhc---C--ccchhhhhhcccc
Q 025814 83 QRDAQTITPEALESVKAALAS---S--DIEHKAETKKKSI 117 (247)
Q Consensus 83 ~~~~~~v~~~~~~~a~~al~~---~--~~~~~~~~~~~~~ 117 (247)
.++++||.|++.++|..|++. . .+.++.+.+..+.
T Consensus 44 ~k~~afV~f~~~~~A~~A~~~l~~~~~~~~gr~l~V~~s~ 83 (89)
T d1x4da1 44 KINEAFIEMATTEDAQAAVDYYTTTPALVFGKPVRVHLSQ 83 (89)
T ss_dssp SSSCEEEEESSHHHHHHHHHHHHHSCCEETTEECEEEEEC
T ss_pred cceEEEEEEcchhhHHHHHHHHhhCCCccCCceEEEEECC
Confidence 478999999999999999863 2 4677777766543
No 171
>d2adba1 d.58.7.1 (A:177-284) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=56.10 E-value=3.2 Score=27.07 Aligned_cols=48 Identities=10% Similarity=-0.039 Sum_probs=30.2
Q ss_pred CCccccccccchhhhcCCCceeeCccCHHHHHHHHh---cCcc--chhhhhhccccc
Q 025814 67 APVYSLPQYHQAQQLFQRDAQTITPEALESVKAALA---SSDI--EHKAETKKKSIP 118 (247)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~a~~al~---~~~~--~~~~~~~~~~~~ 118 (247)
|.+..+..... ..++++||+|++.++|..|+. +..+ .+..+.+.....
T Consensus 32 G~i~~~~i~~~----~~~g~aFV~f~~~e~A~~Ai~~ln~~~l~~~~~~l~v~~s~~ 84 (108)
T d2adba1 32 GTVLKIITFTK----NNQFQALLQYADPVSAQHAKLSLDGQNIYNACCTLRIDFSKL 84 (108)
T ss_dssp SCEEEEEEEEE----TTEEEEEEEESCHHHHHHHHHHHHSCCSSTTCCCCEEEECSS
T ss_pred CcEEEEEEEee----CCCCeEEEEECCHHHHHHHHHHHCCCEeccCCcEEEEEecCC
Confidence 55544433322 247899999999999999875 4455 345555554433
No 172
>d1whya_ d.58.7.1 (A:) Putative RNA-binding protein 15B, Rbm15b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=54.71 E-value=3.8 Score=26.12 Aligned_cols=34 Identities=18% Similarity=0.052 Sum_probs=23.9
Q ss_pred CCCceeeCccCHHHHHHHHhc---Cccchh--hhhhccc
Q 025814 83 QRDAQTITPEALESVKAALAS---SDIEHK--AETKKKS 116 (247)
Q Consensus 83 ~~~~~~v~~~~~~~a~~al~~---~~~~~~--~~~~~~~ 116 (247)
.++++||+|.+.++|..|+.. ..+.+. .+++..+
T Consensus 52 ~~~~afV~f~~~~~A~~A~~~l~~~~i~g~~~~l~v~~a 90 (97)
T d1whya_ 52 GDSFAYIQYESLDAAQAACAKMRGFPLGGPDRRLRVDFA 90 (97)
T ss_dssp SSCCEEEEESSHHHHHHHHHHHTTCBCSSSSCBCEEEEC
T ss_pred cccEEEeccCCHHHHHHHHHHhCCCEeCCCceEEEEEeC
Confidence 488999999999999988753 455543 3444443
No 173
>d1o0pa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=50.97 E-value=3.6 Score=26.72 Aligned_cols=50 Identities=8% Similarity=0.010 Sum_probs=33.6
Q ss_pred CCCccccccccchh--hhcCCCceeeCccCHHHHHHHHh---cCccchhhhhhcc
Q 025814 66 VAPVYSLPQYHQAQ--QLFQRDAQTITPEALESVKAALA---SSDIEHKAETKKK 115 (247)
Q Consensus 66 ~~~~~~~~~~~~~~--~~~~~~~~~v~~~~~~~a~~al~---~~~~~~~~~~~~~ 115 (247)
+|.+..+....+.. .....|..||.|++.++|.+|+. +..++++.+.+..
T Consensus 38 ~G~v~~v~I~~~~~~~~~~~~g~vfV~f~~~e~A~~A~~~l~Gr~f~gR~v~v~f 92 (104)
T d1o0pa_ 38 YGLVKSIEIPRPVDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGRKFANRVVVTKY 92 (104)
T ss_dssp TSCEEEEECCCCTTSSSCTTCCEEEEEESCHHHHHHHHHHHSSCCSSSSCCEEEE
T ss_pred cCceEEEEEeecCCCCccCCceEEEEEECCHHHHHHHHHHHCCCEECCeEEEEEE
Confidence 36665554443332 34457899999999999988875 4567777776644
No 174
>d1wwha1 d.58.7.1 (A:169-249) Nucleoporin 35 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=46.56 E-value=5 Score=24.85 Aligned_cols=29 Identities=10% Similarity=-0.036 Sum_probs=22.6
Q ss_pred hcCCCceeeCccCHHHHHHHHhc--Cccchh
Q 025814 81 LFQRDAQTITPEALESVKAALAS--SDIEHK 109 (247)
Q Consensus 81 ~~~~~~~~v~~~~~~~a~~al~~--~~~~~~ 109 (247)
...++++||.|++.++|.+||.. ..++++
T Consensus 36 ~~~~~~~fV~f~~~~~A~~Al~~nG~~~~g~ 66 (81)
T d1wwha1 36 SNTGNWMHIRYQSKLQARKALSKDGRIFGES 66 (81)
T ss_dssp CSSSSEEEEEESSHHHHHHHHTTTTCEETTT
T ss_pred cCCCCEEEEEEcccHHHHHHHhcCCCeECCc
Confidence 34589999999999999999963 344444
No 175
>d2cq2a1 d.58.7.1 (A:25-125) Alkylation repair AlkB homolog 8, ALKBH8 {Human (Homo sapiens) [TaxId: 9606]}
Probab=45.57 E-value=5.6 Score=25.62 Aligned_cols=22 Identities=14% Similarity=-0.002 Sum_probs=19.1
Q ss_pred cCCCceeeCccCHHHHHHHHhc
Q 025814 82 FQRDAQTITPEALESVKAALAS 103 (247)
Q Consensus 82 ~~~~~~~v~~~~~~~a~~al~~ 103 (247)
..++++||.|++.++|..|+..
T Consensus 54 ~~k~~aFV~f~~~e~A~~A~~~ 75 (101)
T d2cq2a1 54 PNKPYSFARYRTTEESKRAYVT 75 (101)
T ss_dssp TTCSCEEEEESSHHHHHHHHHH
T ss_pred cCccEEEEEECCHHHHHHHHHH
Confidence 3489999999999999999864
No 176
>d1oj4a2 d.58.26.5 (A:164-283) 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE {Escherichia coli [TaxId: 562]}
Probab=44.46 E-value=21 Score=23.44 Aligned_cols=40 Identities=15% Similarity=0.243 Sum_probs=28.6
Q ss_pred HHHHHhccCCCeeEEEEEecCCCCCcceEEEEEecCHHHHHHHHHHhCC
Q 025814 154 VLSKAFSRFPSFNMAKVVRDKRTGKTKGYGFISFANPSDIAAALKEMNG 202 (247)
Q Consensus 154 ~L~~~F~~~G~i~~v~i~~~~~tg~~kg~~FV~f~~~~~a~~Al~~l~g 202 (247)
++.+.+..+|.+ + + ||-.. .+|..|++.++|..+++.+..
T Consensus 61 ~~~~~L~~~g~~---~-M----SGSGs-tvF~~f~~~~~a~~~~~~l~~ 100 (120)
T d1oj4a2 61 AVLSWLLEYAPS---R-L----TGTGA-CVFAEFDTESEARQVLEQAPE 100 (120)
T ss_dssp HHHHHHTTTSCE---E-E----CTTSS-CEEEEESSHHHHHHHHHHSCG
T ss_pred HHHHHHhhcccc---e-e----cCCCC-EEEEEeCCHHHHHHHHHHcCc
Confidence 456667788853 2 2 33322 679999999999999988754
No 177
>d1q4ra_ d.58.4.4 (A:) Hypothetical protein AT3G17210.1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=38.30 E-value=42 Score=20.99 Aligned_cols=51 Identities=14% Similarity=0.253 Sum_probs=32.6
Q ss_pred CCCCCCcHHHHHHHhc-------cCCCeeEEEEEecCC-CCCcceE--EE-EEecCHHHHHH
Q 025814 145 DLGNEVNDDVLSKAFS-------RFPSFNMAKVVRDKR-TGKTKGY--GF-ISFANPSDIAA 195 (247)
Q Consensus 145 nLp~~~~e~~L~~~F~-------~~G~i~~v~i~~~~~-tg~~kg~--~F-V~f~~~~~a~~ 195 (247)
.|..+++++++.+++. .+..|..+.+-++-. .+...|| || ++|.+.++.+.
T Consensus 9 k~k~~~~~~~~~~~~~~l~~L~~~ip~i~~~~~G~~~~~~~~~~~y~~~l~~~F~s~e~l~~ 70 (103)
T d1q4ra_ 9 SFKDGVSPEKIEELIKGYANLVNLIEPMKAFHWGKDVSIENLHQGYTHIFESTFESKEAVAE 70 (103)
T ss_dssp EECTTCCHHHHHHHHHHHHTHHHHCTTCCEEEEEECCCSSSCSTTCCEEEEEEESCHHHHHH
T ss_pred EECCCCCHHHHHHHHHHHHHhhhhCceeEEEEeccccCCcccCCCccEEEEEEECCHHHHHH
Confidence 4667778877665543 466778887766532 1455666 65 57888776554
No 178
>d2od6a1 d.58.4.22 (A:1-109) Hypothetical protein GOS_2359375 {environmental samples}
Probab=37.06 E-value=49 Score=21.36 Aligned_cols=47 Identities=9% Similarity=0.053 Sum_probs=33.4
Q ss_pred HHHHHHhccCCCeeEEE-EEecCCCCCcceEEEEEecCHHHHHHHHHHh
Q 025814 153 DVLSKAFSRFPSFNMAK-VVRDKRTGKTKGYGFISFANPSDIAAALKEM 200 (247)
Q Consensus 153 ~~L~~~F~~~G~i~~v~-i~~~~~tg~~kg~~FV~f~~~~~a~~Al~~l 200 (247)
+++...|...|-+.... .+.+ ..|..+-....+|.|.++.++|...+
T Consensus 32 ~~~~~~Lk~~Gl~r~~~~~iwN-k~~~fr~~~i~EYkd~~Afk~Cq~i~ 79 (109)
T d2od6a1 32 PVWVKEMKSRGLLKFSMNRVWN-KGEVFRVVMTYEYKDRASFEANIAYL 79 (109)
T ss_dssp HHHHHHHHTTTEEEEEEEEECS-SSSCEEEEEEEEESSHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCceEEEEEEeC-CCCcEEEEEEEEECCHHHHHHHHHHH
Confidence 44556677788776543 3444 46777777788999999999887655
No 179
>d2ix0a2 b.40.4.5 (A:4-82) Exoribonuclease 2, RNB {Escherichia coli [TaxId: 562]}
Probab=35.64 E-value=2.6 Score=26.33 Aligned_cols=38 Identities=16% Similarity=0.224 Sum_probs=20.0
Q ss_pred CCcceEEEEEecCHHHHHHHHHHhCCceeCCEeEEEEEc
Q 025814 177 GKTKGYGFISFANPSDIAAALKEMNGKYVGNRPIKLRKS 215 (247)
Q Consensus 177 g~~kg~~FV~f~~~~~a~~Al~~l~g~~i~g~~l~V~~a 215 (247)
...+|||||.-++.++.--.-..|++. ++|-++.|...
T Consensus 25 ~~~~G~GFv~~d~~~DifI~~~~~~~A-~~GD~V~v~i~ 62 (79)
T d2ix0a2 25 ATEKGFGFLEVDAQKSYFIPPPQMKKV-MHGDRIIAVIH 62 (79)
T ss_dssp CCC--CEEEEEETTEEEEECHHHHTTC-CTTCEEEEEEE
T ss_pred EeCCCcEEEEECCCCcEEECHHHHcCC-CCCCEEEEEEE
Confidence 345789999887644332223344443 45556677654
No 180
>d2v94a1 d.12.1.3 (A:1-93) Ribosomal protein S24e {Pyrococcus abyssi [TaxId: 29292]}
Probab=34.86 E-value=44 Score=20.98 Aligned_cols=18 Identities=22% Similarity=0.346 Sum_probs=11.0
Q ss_pred CCcceEEEEEecCHHHHHH
Q 025814 177 GKTKGYGFISFANPSDIAA 195 (247)
Q Consensus 177 g~~kg~~FV~f~~~~~a~~ 195 (247)
|.+.|||+| |++.+.+.+
T Consensus 63 ~~stG~a~I-Yd~~e~~kk 80 (93)
T d2v94a1 63 YKSKGYAKY-YYDKDRMLY 80 (93)
T ss_dssp SEEEEEEEE-ESSHHHHHH
T ss_pred ceEEEEEEE-ECCHHHHHh
Confidence 445566665 777776644
No 181
>d1qyra_ c.66.1.24 (A:) High level kasugamycin resistance protein KsgA {Escherichia coli [TaxId: 562]}
Probab=33.42 E-value=17 Score=27.49 Aligned_cols=32 Identities=13% Similarity=0.158 Sum_probs=24.1
Q ss_pred EEEEcCCCCCCcHHHHHHHhccCCCeeEEEEE
Q 025814 140 RLFCGDLGNEVNDDVLSKAFSRFPSFNMAKVV 171 (247)
Q Consensus 140 ~lfV~nLp~~~~e~~L~~~F~~~G~i~~v~i~ 171 (247)
...|||||+.++..-|..++.....+..+.++
T Consensus 92 ~~vvgNlPY~Iss~Il~~l~~~~~~~~~~~~m 123 (252)
T d1qyra_ 92 LRVFGNLPYNISTPLMFHLFSYTDAIADMHFM 123 (252)
T ss_dssp EEEEEECCTTTHHHHHHHHHTTGGGEEEEEEE
T ss_pred eEEEecchHHHHHHHHHHhcccccceehhhhh
Confidence 57789999999999988887765555544333
No 182
>d1ywxa1 d.12.1.3 (A:1-102) Ribosomal protein S24e {Methanococcus maripaludis [TaxId: 39152]}
Probab=32.31 E-value=50 Score=21.13 Aligned_cols=46 Identities=9% Similarity=0.121 Sum_probs=23.1
Q ss_pred CCcHHHHHHHh----ccCCCeeEEEEEecC-CCCCcceEEEEEecCHHHHHH
Q 025814 149 EVNDDVLSKAF----SRFPSFNMAKVVRDK-RTGKTKGYGFISFANPSDIAA 195 (247)
Q Consensus 149 ~~~e~~L~~~F----~~~G~i~~v~i~~~~-~tg~~kg~~FV~f~~~~~a~~ 195 (247)
..+-.+|++.+ ..=....-|.=++.. ..|.+.|||+| |++.+.+..
T Consensus 29 Tpsr~ei~~kla~~~~~~~~~vvv~~~~t~fG~~~stG~a~I-Yd~~e~~kk 79 (102)
T d1ywxa1 29 TPSIKDVKMKLVAVLNANKQVLVVDTLDQIFGKLEAEGYAKI-YNDEKAMAT 79 (102)
T ss_dssp CCCHHHHHHHHHHHHTSCSTTEEEEEEEECSSSSEEEEEEEE-CSCHHHHHH
T ss_pred CCCHHHHHHHHHHHHCcCcCEEEEEcCEecCCCCeEEEEEEE-ECCHHHHHh
Confidence 45555655444 333333334333332 33456677765 677766653
No 183
>d1ueka2 d.58.26.5 (A:149-268) 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE {Thermus thermophilus [TaxId: 274]}
Probab=31.04 E-value=47 Score=21.32 Aligned_cols=44 Identities=9% Similarity=0.015 Sum_probs=30.6
Q ss_pred HHHHHHhccCCCeeEEEEEecCCCCCcceEEEEEecCHHHHHHHHHHhCCc
Q 025814 153 DVLSKAFSRFPSFNMAKVVRDKRTGKTKGYGFISFANPSDIAAALKEMNGK 203 (247)
Q Consensus 153 ~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~~FV~f~~~~~a~~Al~~l~g~ 203 (247)
.++.+.+..+|... +.+ +|-.- .+|..|.+.++|+++.+.|...
T Consensus 66 ~~~~~~l~~~g~~~-~~m-----SGSGs-t~F~l~~~~~~a~~~~~~l~~~ 109 (120)
T d1ueka2 66 KEVRGRMRALGLRG-VLM-----SGSGS-AFFGLAEGPDHARRAAEALRAW 109 (120)
T ss_dssp HHHHHHHHHTTCEE-EEE-----CTTSS-CEEEECSSHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHhhhhh-eee-----cCCCC-eEEEEeCCHHHHHHHHHHHHHh
Confidence 45666677777543 333 33322 5799999999999999988764
No 184
>d1yuba_ c.66.1.24 (A:) rRNA adenine dimethylase {Streptococcus pneumoniae, Ermam [TaxId: 1313]}
Probab=29.61 E-value=48 Score=24.61 Aligned_cols=28 Identities=11% Similarity=0.267 Sum_probs=22.0
Q ss_pred CCCCcEEEEcCCCCCCcHHHHHHHhccC
Q 025814 135 PENDYRLFCGDLGNEVNDDVLSKAFSRF 162 (247)
Q Consensus 135 ~~~~~~lfV~nLp~~~~e~~L~~~F~~~ 162 (247)
.....-.+|||||+.++..-|..++...
T Consensus 90 ~~~~~~~vv~NLPY~Ist~il~~~l~~~ 117 (245)
T d1yuba_ 90 PNKQRYKIVGNIPYHLSTQIIKKVVFES 117 (245)
T ss_dssp CCSSEEEEEEECCSSSCHHHHHHHHHHC
T ss_pred ccceeeeEeeeeehhhhHHHHHHHhhhc
Confidence 4444567899999999999999887543
No 185
>d1xn9a_ d.12.1.3 (A:) Ribosomal protein S24e {Methanosarcina mazei [TaxId: 2209]}
Probab=29.15 E-value=62 Score=20.61 Aligned_cols=46 Identities=7% Similarity=0.265 Sum_probs=22.7
Q ss_pred CCcHHHHHHHhc-cCC---CeeEEEEEecC-CCCCcceEEEEEecCHHHHHH
Q 025814 149 EVNDDVLSKAFS-RFP---SFNMAKVVRDK-RTGKTKGYGFISFANPSDIAA 195 (247)
Q Consensus 149 ~~~e~~L~~~F~-~~G---~i~~v~i~~~~-~tg~~kg~~FV~f~~~~~a~~ 195 (247)
..+-.+|++.+. .+| ...-|.=+... ..|.+.|||+| |++.+.+..
T Consensus 29 Tpsr~ei~~kla~~~~~~~~~vvv~~~~t~fG~~~stG~a~I-Yd~~e~~k~ 79 (101)
T d1xn9a_ 29 TPSRNDVRNKLAAMLNAPLELLVIQRIKTEYGMQESKGYAKL-YEDADRMKQ 79 (101)
T ss_dssp CCCHHHHHHHHHHHTTCCTTTEEEEEEEECSSSSEEEEEEEE-CSCHHHHHH
T ss_pred CCCHHHHHHHHHHhHCcCcCEEEEEcCcccCCCceEEEEEEE-ECCHHHHHh
Confidence 455666665542 344 33333333332 23455666665 666666553
No 186
>d1i4wa_ c.66.1.24 (A:) Transcription factor sc-mtTFB {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=27.47 E-value=22 Score=27.77 Aligned_cols=21 Identities=14% Similarity=0.188 Sum_probs=17.9
Q ss_pred EEEEcCCCCCCcHHHHHHHhc
Q 025814 140 RLFCGDLGNEVNDDVLSKAFS 160 (247)
Q Consensus 140 ~lfV~nLp~~~~e~~L~~~F~ 160 (247)
-++|||||+.++..-|.+++.
T Consensus 129 ~~vvaNLPy~iss~il~~~l~ 149 (322)
T d1i4wa_ 129 FLTVANVTGEGSEGLIMQWLS 149 (322)
T ss_dssp EEEEEECCSTTHHHHHHHHHH
T ss_pred eEEEEeCCchhhHHHHHHHHH
Confidence 478999999999998887764
No 187
>d1zq9a1 c.66.1.24 (A:36-313) Probable dimethyladenosine transferase {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.52 E-value=25 Score=26.93 Aligned_cols=29 Identities=17% Similarity=0.218 Sum_probs=22.3
Q ss_pred EEEEcCCCCCCcHHHHHHHhccCCCeeEE
Q 025814 140 RLFCGDLGNEVNDDVLSKAFSRFPSFNMA 168 (247)
Q Consensus 140 ~lfV~nLp~~~~e~~L~~~F~~~G~i~~v 168 (247)
...|||||+.++..-|..++.....+..+
T Consensus 88 ~~vV~NLPY~Iss~il~~~~~~~~~~~~~ 116 (278)
T d1zq9a1 88 DTCVANLPYQISSPFVFKLLLHRPFFRCA 116 (278)
T ss_dssp SEEEEECCGGGHHHHHHHHHHCSSCCSEE
T ss_pred hhhhcchHHHHHHHHHHHHHhhCCcccee
Confidence 46899999999999998887655444443
No 188
>d1t15a2 c.15.1.3 (A:1758-1859) Breast cancer associated protein, BRCA1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.81 E-value=33 Score=20.94 Aligned_cols=29 Identities=10% Similarity=-0.001 Sum_probs=22.2
Q ss_pred CcEEEEcCCCCCCcHHHHHHHhccCCCee
Q 025814 138 DYRLFCGDLGNEVNDDVLSKAFSRFPSFN 166 (247)
Q Consensus 138 ~~~lfV~nLp~~~~e~~L~~~F~~~G~i~ 166 (247)
+.++|+.+.-...+.++|+.+...+|...
T Consensus 6 g~~i~~~g~~~~~~~~~L~~li~~~GG~v 34 (102)
T d1t15a2 6 GLEICCYGPFTNMPTDQLEWMVQLCGASV 34 (102)
T ss_dssp TCEEEECSCCSSSCHHHHHHHHHHTTCEE
T ss_pred CcEEEEeCCCCCcCHHHHHHHHHHhCCEE
Confidence 45788877445577899999999998743
No 189
>d1qama_ c.66.1.24 (A:) rRNA adenine dimethylase {Bacillus subtilis, Ermc' [TaxId: 1423]}
Probab=21.86 E-value=39 Score=24.96 Aligned_cols=22 Identities=14% Similarity=0.298 Sum_probs=18.6
Q ss_pred EEEEcCCCCCCcHHHHHHHhcc
Q 025814 140 RLFCGDLGNEVNDDVLSKAFSR 161 (247)
Q Consensus 140 ~lfV~nLp~~~~e~~L~~~F~~ 161 (247)
...|||||+.++..-|..++..
T Consensus 87 ~~vv~NLPYnIss~il~~ll~~ 108 (235)
T d1qama_ 87 YKIFGNIPYNISTDIIRKIVFD 108 (235)
T ss_dssp CEEEEECCGGGHHHHHHHHHHS
T ss_pred ceeeeeehhhhhHHHHHHHHhh
Confidence 4678999999999999988743
Done!