Your job contains 1 sequence.
>025815
MGHLLSPPIPRSIFFPSFIYLTALIPFPAPNLSHIKIVSFPFQSLMSAAVSAAAAAACCS
SKSSGTTTSRTTTTAARTHHSMLFSSPQASIQSPVVSFGRYEAQKRRDWDTFMQYLSQHR
PPLALSRCSGAHVLEFLKYLDQFGKTKVHAQSCPLFGHAHAPAPCRCPMMQAWGSLDALV
GRLRAAYEENGGQPEINPFSARAVRLYLRDVRDVQAEARGMIGYDQKKTRKNNYMPHHIQ
QQEQYYD
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 025815
(247 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2007382 - symbol:LSH6 "AT1G07090" species:3702... 564 1.3e-54 1
TAIR|locus:2082170 - symbol:LSH4 "LIGHT SENSITIVE HYPOCOT... 559 4.3e-54 1
TAIR|locus:2055897 - symbol:LSH3 "AT2G31160" species:3702... 558 5.5e-54 1
TAIR|locus:2147494 - symbol:LSH1 "AT5G28490" species:3702... 553 1.9e-53 1
TAIR|locus:2100850 - symbol:LSH2 "AT3G04510" species:3702... 529 6.5e-51 1
TAIR|locus:2171263 - symbol:LSH5 "AT5G58500" species:3702... 519 7.4e-50 1
TAIR|locus:2041514 - symbol:LSH10 "AT2G42610" species:370... 494 3.3e-47 1
TAIR|locus:505006228 - symbol:LSH7 "AT1G78815" species:37... 467 2.4e-44 1
TAIR|locus:2124067 - symbol:LSH9 "AT4G18610" species:3702... 452 9.3e-43 1
TAIR|locus:2015591 - symbol:LSH8 "AT1G16910" species:3702... 422 1.4e-39 1
TAIR|locus:2122955 - symbol:AT4G19500 species:3702 "Arabi... 92 0.00016 2
>TAIR|locus:2007382 [details] [associations]
symbol:LSH6 "AT1G07090" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC067971
InterPro:IPR006936 Pfam:PF04852 HOGENOM:HOG000239606
ProtClustDB:CLSN2681853 eggNOG:NOG318039 EMBL:AY086869
EMBL:BT003842 EMBL:BT020303 EMBL:BT024584 IPI:IPI00548420
PIR:G86205 RefSeq:NP_563780.1 UniGene:At.42313 PaxDb:Q9LMK2
PRIDE:Q9LMK2 EnsemblPlants:AT1G07090.1 GeneID:837220
KEGG:ath:AT1G07090 TAIR:At1g07090 InParanoid:Q9LMK2 OMA:HVAACPY
PhylomeDB:Q9LMK2 ArrayExpress:Q9LMK2 Genevestigator:Q9LMK2
Uniprot:Q9LMK2
Length = 196
Score = 564 (203.6 bits), Expect = 1.3e-54, P = 1.3e-54
Identities = 99/141 (70%), Positives = 121/141 (85%)
Query: 91 IQSPVVSFGRYEAQKRRDWDTFMQYLSQHRPPLALSRCSGAHVLEFLKYLDQFGKTKVHA 150
+ SP + RYE+QKRRDW+TF+QYL H+PPLALSRCSGAHV+EFLKYLDQFGKTKVH
Sbjct: 22 VSSPPATPSRYESQKRRDWNTFLQYLKNHKPPLALSRCSGAHVIEFLKYLDQFGKTKVHV 81
Query: 151 QSCPLFGHAHAPAPCRCPMMQAWGSLDALVGRLRAAYEENGGQPEINPFSARAVRLYLRD 210
+CP FGH P+PC CP+ QAWGSLDAL+GRLRAAYEENGG+P+ NPF+ARAVR+YLR+
Sbjct: 82 AACPYFGHQQPPSPCSCPLKQAWGSLDALIGRLRAAYEENGGRPDSNPFAARAVRIYLRE 141
Query: 211 VRDVQAEARGMIGYDQKKTRK 231
VR+ QA+ARG I Y++KK ++
Sbjct: 142 VRESQAKARG-IPYEKKKRKR 161
>TAIR|locus:2082170 [details] [associations]
symbol:LSH4 "LIGHT SENSITIVE HYPOCOTYLS 4" species:3702
"Arabidopsis thaliana" [GO:0005739 "mitochondrion" evidence=ISM]
EMBL:CP002686 EMBL:AB015474 InterPro:IPR006936 Pfam:PF04852
HOGENOM:HOG000239606 ProtClustDB:CLSN2681853 EMBL:AP000733
IPI:IPI00532469 RefSeq:NP_001078202.2 UniGene:At.37728
EnsemblPlants:AT3G23290.2 GeneID:821908 KEGG:ath:AT3G23290
TAIR:At3g23290 OMA:FEENGGS PhylomeDB:Q9LW68 Genevestigator:Q9LW68
Uniprot:Q9LW68
Length = 195
Score = 559 (201.8 bits), Expect = 4.3e-54, P = 4.3e-54
Identities = 104/147 (70%), Positives = 118/147 (80%)
Query: 85 SSPQASIQSPVVSFGRYEAQKRRDWDTFMQYLSQHRPPLALSRCSGAHVLEFLKYLDQFG 144
SS +S S RYE QKRRDW+TF QYL HRPPL+LSRCSGAHVLEFL+YLDQFG
Sbjct: 33 SSSSSSGGSGTNQLSRYENQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLRYLDQFG 92
Query: 145 KTKVHAQSCPLFGHAHAPAPCRCPMMQAWGSLDALVGRLRAAYEENGGQPEINPFSARAV 204
KTKVH CP FGH + PAPC CP+ QAWGSLDAL+GRLRAA+EENGG PE NPF ARAV
Sbjct: 93 KTKVHTHLCPFFGHPNPPAPCACPLRQAWGSLDALIGRLRAAFEENGGSPETNPFGARAV 152
Query: 205 RLYLRDVRDVQAEARGMIGYDQKKTRK 231
RLYLR+VRD QA+ARG I Y++KK ++
Sbjct: 153 RLYLREVRDSQAKARG-ISYEKKKRKR 178
>TAIR|locus:2055897 [details] [associations]
symbol:LSH3 "AT2G31160" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0007389 "pattern specification process"
evidence=RCA] [GO:0009855 "determination of bilateral symmetry"
evidence=RCA] [GO:0009944 "polarity specification of
adaxial/abaxial axis" evidence=RCA] [GO:0010014 "meristem
initiation" evidence=RCA] [GO:0010075 "regulation of meristem
growth" evidence=RCA] [GO:0048438 "floral whorl development"
evidence=RCA] [GO:0048439 "flower morphogenesis" evidence=RCA]
EMBL:CP002685 GenomeReviews:CT485783_GR EMBL:AC005311
InterPro:IPR006936 Pfam:PF04852 EMBL:AY056383 EMBL:AY081705
IPI:IPI00548372 PIR:C84717 RefSeq:NP_565716.1 UniGene:At.24312
IntAct:O82268 STRING:O82268 EnsemblPlants:AT2G31160.1 GeneID:817672
KEGG:ath:AT2G31160 TAIR:At2g31160 eggNOG:NOG307109
HOGENOM:HOG000239606 InParanoid:O82268 OMA:QQFQMLP PhylomeDB:O82268
ProtClustDB:CLSN2681853 ArrayExpress:O82268 Genevestigator:O82268
Uniprot:O82268
Length = 219
Score = 558 (201.5 bits), Expect = 5.5e-54, P = 5.5e-54
Identities = 100/147 (68%), Positives = 121/147 (82%)
Query: 85 SSPQASIQSPVVSFGRYEAQKRRDWDTFMQYLSQHRPPLALSRCSGAHVLEFLKYLDQFG 144
+ P +S SP + RYE QKRRDW+TF QYL HRPPL+LSRCSGAHVLEFL+YLDQFG
Sbjct: 39 TQPLSSSSSPSANSSRYENQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLRYLDQFG 98
Query: 145 KTKVHAQSCPLFGHAHAPAPCRCPMMQAWGSLDALVGRLRAAYEENGGQPEINPFSARAV 204
KTKVH C +GH + PAPC CP+ QAWGSLDAL+GRLRAA+EENGG+PE NPF ARAV
Sbjct: 99 KTKVHTNICHFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGKPETNPFGARAV 158
Query: 205 RLYLRDVRDVQAEARGMIGYDQKKTRK 231
RLYLR+VRD+Q++ARG + Y++KK ++
Sbjct: 159 RLYLREVRDMQSKARG-VSYEKKKRKR 184
>TAIR|locus:2147494 [details] [associations]
symbol:LSH1 "AT5G28490" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009416 "response to light
stimulus" evidence=IMP] [GO:0009637 "response to blue light"
evidence=IGI] [GO:0009826 "unidimensional cell growth"
evidence=IMP] [GO:0010114 "response to red light" evidence=IGI]
[GO:0010218 "response to far red light" evidence=IGI] GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009637 GO:GO:0010218
GO:GO:0010114 GO:GO:0009826 InterPro:IPR006936 Pfam:PF04852
HOGENOM:HOG000239606 ProtClustDB:CLSN2681853 EMBL:AY319947
EMBL:BT010821 EMBL:BT011304 IPI:IPI00519848 RefSeq:NP_198201.1
UniGene:At.49252 IntAct:Q6NNI3 STRING:Q6NNI3 PRIDE:Q6NNI3
EnsemblPlants:AT5G28490.1 GeneID:832941 KEGG:ath:AT5G28490
TAIR:At5g28490 eggNOG:NOG323153 InParanoid:Q6NNI3 OMA:LISHQPN
PhylomeDB:Q6NNI3 Genevestigator:Q6NNI3 Uniprot:Q6NNI3
Length = 190
Score = 553 (199.7 bits), Expect = 1.9e-53, P = 1.9e-53
Identities = 105/164 (64%), Positives = 124/164 (75%)
Query: 86 SPQASIQSPVVSFGRYEAQKRRDWDTFMQYLSQHRPPLALSRCSGAHVLEFLKYLDQFGK 145
+P +S Q S RYE QKRRDW+TF QYL HRPPL+L CSGAHVLEFL+YLDQFGK
Sbjct: 11 NPNSSTQLTPPSSSRYENQKRRDWNTFCQYLRNHRPPLSLPSCSGAHVLEFLRYLDQFGK 70
Query: 146 TKVHAQSCPLFGHAHAPAPCRCPMMQAWGSLDALVGRLRAAYEENGGQPEINPFSARAVR 205
TKVH Q+C FG + PAPC CP+ QAWGSLDAL+GRLRAAYEENGG PE NPF +RAVR
Sbjct: 71 TKVHHQNCAFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGPPEANPFGSRAVR 130
Query: 206 LYLRDVRDVQAEARGMIGYDQKKTRKNNYMPH-----HIQQQEQ 244
L+LR+VRD QA+ARG + Y++K+ R N P +QQQ+Q
Sbjct: 131 LFLREVRDFQAKARG-VSYEKKRKRVNRQKPQTQPPLQLQQQQQ 173
>TAIR|locus:2100850 [details] [associations]
symbol:LSH2 "AT3G04510" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AC022287
InterPro:IPR006936 Pfam:PF04852 HOGENOM:HOG000239606
ProtClustDB:CLSN2681853 EMBL:AY630774 EMBL:AY924763 IPI:IPI00516968
RefSeq:NP_187101.1 UniGene:At.66526 EnsemblPlants:AT3G04510.1
GeneID:819607 KEGG:ath:AT3G04510 TAIR:At3g04510 eggNOG:NOG327915
InParanoid:Q9M836 OMA:MANYHHG PhylomeDB:Q9M836 ArrayExpress:Q9M836
Genevestigator:Q9M836 Uniprot:Q9M836
Length = 201
Score = 529 (191.3 bits), Expect = 6.5e-51, P = 6.5e-51
Identities = 99/162 (61%), Positives = 122/162 (75%)
Query: 83 LFSSPQASIQSPVVSFGRYEAQKRRDWDTFMQYLSQHRPPLALSRCSGAHVLEFLKYLDQ 142
L + +S SP S RYE QKRRDW+TF QYL H PPL+L+ CSGAHVL+FL+YLDQ
Sbjct: 17 LSTQTPSSFSSPPSS-SRYENQKRRDWNTFCQYLRNHHPPLSLASCSGAHVLDFLRYLDQ 75
Query: 143 FGKTKVHAQSCPLFGHAHAPAPCRCPMMQAWGSLDALVGRLRAAYEENGGQPEINPFSAR 202
FGKTKVH Q+C FG + PAPC CP+ QAWGSLDAL+GRLRAAYEENGG PE +PF +R
Sbjct: 76 FGKTKVHHQNCAFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGAPETSPFGSR 135
Query: 203 AVRLYLRDVRDVQAEARGMIGYDQKKTRKNNYMPHHIQQQEQ 244
+VR++LR+VRD QA++RG + Y++K+ R NN Q Q Q
Sbjct: 136 SVRIFLREVRDFQAKSRG-VSYEKKRKRVNNKQITQSQPQSQ 176
>TAIR|locus:2171263 [details] [associations]
symbol:LSH5 "AT5G58500" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002688
GenomeReviews:BA000015_GR EMBL:AB025632 InterPro:IPR006936
Pfam:PF04852 HOGENOM:HOG000239606 ProtClustDB:CLSN2681853
EMBL:BT010401 IPI:IPI00523728 RefSeq:NP_200658.1 UniGene:At.29277
PaxDb:Q9FGH2 PRIDE:Q9FGH2 EnsemblPlants:AT5G58500.1 GeneID:835963
KEGG:ath:AT5G58500 TAIR:At5g58500 eggNOG:NOG289149
InParanoid:Q9FGH2 OMA:VHATACP PhylomeDB:Q9FGH2
Genevestigator:Q9FGH2 Uniprot:Q9FGH2
Length = 182
Score = 519 (187.8 bits), Expect = 7.4e-50, P = 7.4e-50
Identities = 94/133 (70%), Positives = 113/133 (84%)
Query: 100 RYEAQKRRDWDTFMQYLSQHRPPLALSRCSGAHVLEFLKYLDQFGKTKVHAQSCPLFGHA 159
RYE+QKRRDW+TF+QYL H+PPL LSRCSGAHVLEFLKYLDQFGKTKVHA +CP FG
Sbjct: 19 RYESQKRRDWNTFLQYLRNHKPPLNLSRCSGAHVLEFLKYLDQFGKTKVHATACPFFGQP 78
Query: 160 HAPAPCRCPMMQAWGSLDALVGRLRAAYEE-NGGQPEINPFSARAVRLYLRDVRDVQAEA 218
+ P+ C CP+ QAWGSLDAL+GRLRAA+EE GG PE NPF+A+AVR+YL++VR QA+A
Sbjct: 79 NPPSQCTCPLKQAWGSLDALIGRLRAAFEEIGGGLPESNPFAAKAVRIYLKEVRQTQAKA 138
Query: 219 RGMIGYDQKKTRK 231
RG I YD+KK ++
Sbjct: 139 RG-IPYDKKKRKR 150
>TAIR|locus:2041514 [details] [associations]
symbol:LSH10 "AT2G42610" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002685 GenomeReviews:CT485783_GR EMBL:AC007087
InterPro:IPR006936 Pfam:PF04852 HOGENOM:HOG000239606
ProtClustDB:CLSN2681853 EMBL:AF218765 EMBL:BT003740 EMBL:EF597874
EMBL:EF597875 EMBL:EF597876 EMBL:EF597877 EMBL:EF597878
EMBL:EF597879 EMBL:EF597880 EMBL:EF597881 EMBL:EF597882
EMBL:EF597883 EMBL:EF597884 EMBL:EF597885 EMBL:EF597886
EMBL:EF597887 EMBL:EF597888 EMBL:EF597889 EMBL:EF597890
EMBL:EF597891 EMBL:EF597892 EMBL:EF597893 EMBL:EF597894
EMBL:EF597895 EMBL:EF597896 EMBL:EF597897 EMBL:AK118714
EMBL:AK119048 IPI:IPI00528103 PIR:A84856 RefSeq:NP_565978.1
RefSeq:NP_850374.1 UniGene:At.24332 PaxDb:Q9S7R3 PRIDE:Q9S7R3
EnsemblPlants:AT2G42610.1 EnsemblPlants:AT2G42610.2 GeneID:818861
KEGG:ath:AT2G42610 TAIR:At2g42610 eggNOG:NOG281199
InParanoid:Q9S7R3 OMA:PPVPMSH PhylomeDB:Q9S7R3 ArrayExpress:Q9S7R3
Genevestigator:Q9S7R3 Uniprot:Q9S7R3
Length = 177
Score = 494 (179.0 bits), Expect = 3.3e-47, P = 3.3e-47
Identities = 90/144 (62%), Positives = 111/144 (77%)
Query: 88 QASIQSPVVSFGRYEAQKRRDWDTFMQYLSQHRPPLALSRCSGAHVLEFLKYLDQFGKTK 147
++S P V+ RYE+QKRRDW+TF QYL RPP+ +S CS HVL+FL+YLDQFGKTK
Sbjct: 13 ESSGSEPPVTPSRYESQKRRDWNTFGQYLKNQRPPVPMSHCSCNHVLDFLRYLDQFGKTK 72
Query: 148 VHAQSCPLFGHAHAPAPCRCPMMQAWGSLDALVGRLRAAYEENGGQPEINPFSARAVRLY 207
VH C +G PAPC CP+ QAWGSLDAL+GRLRAAYEENGG PE NPF++ A+R+Y
Sbjct: 73 VHVPGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEENGGPPETNPFASGAIRVY 132
Query: 208 LRDVRDVQAEARGMIGYDQKKTRK 231
LR+VR+ QA+ARG I Y +KK +K
Sbjct: 133 LREVRECQAKARG-IPYKKKKKKK 155
>TAIR|locus:505006228 [details] [associations]
symbol:LSH7 "AT1G78815" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0009691 "cytokinin biosynthetic process"
evidence=RCA] EMBL:CP002684 EMBL:AC005679 InterPro:IPR006936
Pfam:PF04852 ProtClustDB:CLSN2681853 UniGene:At.22687
IPI:IPI00520064 PIR:D96817 RefSeq:NP_565190.1 UniGene:At.70335
PRIDE:Q9ZVA0 EnsemblPlants:AT1G78815.1 GeneID:844218
KEGG:ath:AT1G78815 TAIR:At1g78815 InParanoid:Q9ZVA0 OMA:QVEPAGQ
PhylomeDB:Q9ZVA0 Genevestigator:Q9ZVA0 Uniprot:Q9ZVA0
Length = 195
Score = 467 (169.5 bits), Expect = 2.4e-44, P = 2.4e-44
Identities = 85/152 (55%), Positives = 108/152 (71%)
Query: 87 PQASIQSPVVSFGRYEAQKRRDWDTFMQYLSQHRPPLALSRCSGAHVLEFLKYLDQFGKT 146
PQ+ P +S RYE+QKRRDW+TF QYL +PP+ +S+C H+L+FL+YLDQFGKT
Sbjct: 29 PQSPPNPPALS--RYESQKRRDWNTFCQYLRNQQPPVHISQCGSNHILDFLQYLDQFGKT 86
Query: 147 KVHAQSCPLFGHAHAPAPCRCPMMQAWGSLDALVGRLRAAYEENGGQPEINPFSARAVRL 206
KVH C FG C CP+ QAWGSLDAL+GRLRAA+EENGG PE NPF+ +R+
Sbjct: 87 KVHIHGCVFFGQVEPAGQCNCPLKQAWGSLDALIGRLRAAFEENGGLPERNPFAGGGIRV 146
Query: 207 YLRDVRDVQAEARGMIGYDQKKTRKNNYMPHH 238
+LR+VRD QA+ARG+ +KK +K N M H
Sbjct: 147 FLREVRDSQAKARGVPYKKRKKRKKRNPMKSH 178
>TAIR|locus:2124067 [details] [associations]
symbol:LSH9 "AT4G18610" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0009691 "cytokinin biosynthetic process"
evidence=RCA] [GO:0010413 "glucuronoxylan metabolic process"
evidence=RCA] [GO:0045492 "xylan biosynthetic process"
evidence=RCA] EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161549
EMBL:AL035526 InterPro:IPR006936 Pfam:PF04852 HOGENOM:HOG000239606
ProtClustDB:CLSN2681853 EMBL:BT010856 EMBL:BT014677 IPI:IPI00518350
PIR:T04853 RefSeq:NP_193596.1 UniGene:At.32884 PRIDE:Q9SN52
EnsemblPlants:AT4G18610.1 GeneID:827595 KEGG:ath:AT4G18610
TAIR:At4g18610 eggNOG:NOG289576 InParanoid:Q9SN52 OMA:KDVANSS
PhylomeDB:Q9SN52 ArrayExpress:Q9SN52 Genevestigator:Q9SN52
Uniprot:Q9SN52
Length = 191
Score = 452 (164.2 bits), Expect = 9.3e-43, P = 9.3e-43
Identities = 84/139 (60%), Positives = 104/139 (74%)
Query: 94 PVVSFGRYEAQKRRDWDTFMQYLSQHRPPLALSRCSGAHVLEFLKYLDQFGKTKVHAQSC 153
P RYE+QKRRDW+TF+QYL PPL +S+ HVL FL+YLDQFGKTKVH Q+C
Sbjct: 31 PQQPLSRYESQKRRDWNTFVQYLKSQNPPLMMSQFDYTHVLSFLRYLDQFGKTKVHHQAC 90
Query: 154 PLFGHAHAPAPCRCPMMQAWGSLDALVGRLRAAYEENGG-QPEINPFSARAVRLYLRDVR 212
FG P PC CP+ QAWGSLDAL+GRLRAAYEE+GG P+ NPF+ ++R++LR+VR
Sbjct: 91 VFFGQPDPPGPCTCPLKQAWGSLDALIGRLRAAYEEHGGGSPDTNPFANGSIRVHLREVR 150
Query: 213 DVQAEARGMIGYDQKKTRK 231
+ QA+ARG I Y +KK RK
Sbjct: 151 ESQAKARG-IPYRKKKRRK 168
>TAIR|locus:2015591 [details] [associations]
symbol:LSH8 "AT1G16910" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC051629
InterPro:IPR006936 Pfam:PF04852 HOGENOM:HOG000239606
ProtClustDB:CLSN2681853 EMBL:AY800583 IPI:IPI00537981 PIR:F86304
RefSeq:NP_173135.1 UniGene:At.51174 UniGene:At.68988
EnsemblPlants:AT1G16910.1 GeneID:838262 KEGG:ath:AT1G16910
TAIR:At1g16910 eggNOG:NOG318039 InParanoid:Q9FZ51 PhylomeDB:Q9FZ51
ArrayExpress:Q9FZ51 Genevestigator:Q9FZ51 Uniprot:Q9FZ51
Length = 164
Score = 422 (153.6 bits), Expect = 1.4e-39, P = 1.4e-39
Identities = 76/138 (55%), Positives = 97/138 (70%)
Query: 91 IQSPVVSFGRYEAQKRRDWDTFMQYLSQHRPPLALSRCSGAHVLEFLKYLDQFGKTKVHA 150
++ P + RYE+QK RDW+TF QYL PP+ + C H+L+FL+ DQFGKTKVH
Sbjct: 14 VEGPPPTLSRYESQKSRDWNTFCQYLMTKMPPVHVWECESNHILDFLQSRDQFGKTKVHI 73
Query: 151 QSCPLFGHAHAPAPCRCPMMQAWGSLDALVGRLRAAYEENGGQPEINPFSARAVRLYLRD 210
Q C FG P C CP+ QAWGSLDAL+GRLRAAYEENGG E NPF+ +R++LR+
Sbjct: 74 QGCVFFGQKEPPGECNCPLKQAWGSLDALIGRLRAAYEENGGLTEKNPFARGGIRIFLRE 133
Query: 211 VRDVQAEARGMIGYDQKK 228
VR QA+ARG++ Y +KK
Sbjct: 134 VRGSQAKARGVL-YKKKK 150
>TAIR|locus:2122955 [details] [associations]
symbol:AT4G19500 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006952 "defense response" evidence=IEA;ISS] [GO:0007165
"signal transduction" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0043531 "ADP
binding" evidence=IEA] InterPro:IPR000157 InterPro:IPR000767
InterPro:IPR002182 InterPro:IPR003593 Pfam:PF00931 Pfam:PF01582
PRINTS:PR00364 PROSITE:PS50104 SMART:SM00255 SMART:SM00382
GO:GO:0005524 GO:GO:0007165 EMBL:CP002687 GO:GO:0006952
GO:GO:0043531 GO:GO:0005622 GO:GO:0017111 InterPro:IPR025875
Pfam:PF12799 InterPro:IPR011713 Pfam:PF07725 SUPFAM:SSF52200
IPI:IPI00536461 RefSeq:NP_193685.6 UniGene:At.2017
ProteinModelPortal:F4JT78 SMR:F4JT78 PRIDE:F4JT78
EnsemblPlants:AT4G19500.1 GeneID:827691 KEGG:ath:AT4G19500
OMA:IVHEEDE InterPro:IPR006936 Pfam:PF04852 Uniprot:F4JT78
Length = 1309
Score = 92 (37.4 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 171 QAWGSLDALVGRLRAAYEENGGQPEINPFSARAVRLYLRDVRDVQAE 217
Q GS +ALV RL + E G +PE NPF ++AV YL+ RD+ E
Sbjct: 529 QVLGSTEALVDRLIFSSEAFGIKPEENPFRSQAVTSYLKAARDMTRE 575
Score = 74 (31.1 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 108 DWDTFMQYLSQHRPPLALSRCSGAHVLEFLKYLDQFGKTK 147
DW +F ++L PPL +CS V++FL+ G T+
Sbjct: 496 DWCSFCEFLRNRIPPLNPFKCSANDVIDFLRTRQVLGSTE 535
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.324 0.136 0.429 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 247 198 0.00083 111 3 11 22 0.41 32
31 0.45 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 11
No. of states in DFA: 596 (63 KB)
Total size of DFA: 173 KB (2101 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 17.07u 0.08s 17.15t Elapsed: 00:00:01
Total cpu time: 17.07u 0.08s 17.15t Elapsed: 00:00:01
Start: Sat May 11 03:45:50 2013 End: Sat May 11 03:45:51 2013