BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025816
(247 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 155 bits (391), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 84/231 (36%), Positives = 126/231 (54%), Gaps = 8/231 (3%)
Query: 2 VSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVK 61
+S +H + V L+G+C + +L Y++ NG+L L+G P +SW+QR++
Sbjct: 89 LSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYG-----SDLPTMSMSWEQRLE 143
Query: 62 IAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTR 121
I +GAA+GL YLH +A IIHRD+KS N+L+ ++ V KI DF +S + ++
Sbjct: 144 ICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXV 200
Query: 122 VLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKL 181
V GT GY PEY + G+L KSDVYSFGVVL E+L R + +LPR +L WA
Sbjct: 201 VKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESH 260
Query: 182 SEDKVRQCVDARLGGDYPPXXXXXXXXXXXLCVQYEADFRPNMSIVVKALQ 232
+ ++ Q VD L P C+ ++ RP+M V+ L+
Sbjct: 261 NNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 154 bits (389), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 84/231 (36%), Positives = 126/231 (54%), Gaps = 8/231 (3%)
Query: 2 VSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVK 61
+S +H + V L+G+C + +L Y++ NG+L L+G P +SW+QR++
Sbjct: 89 LSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYG-----SDLPTMSMSWEQRLE 143
Query: 62 IAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTR 121
I +GAA+GL YLH +A IIHRD+KS N+L+ ++ V KI DF +S + ++
Sbjct: 144 ICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXV 200
Query: 122 VLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKL 181
V GT GY PEY + G+L KSDVYSFGVVL E+L R + +LPR +L WA
Sbjct: 201 VKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESH 260
Query: 182 SEDKVRQCVDARLGGDYPPXXXXXXXXXXXLCVQYEADFRPNMSIVVKALQ 232
+ ++ Q VD L P C+ ++ RP+M V+ L+
Sbjct: 261 NNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 149 bits (377), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/234 (36%), Positives = 127/234 (54%), Gaps = 8/234 (3%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
M+S H N ++L G+C+ T R+L Y + +NGS+ L R + P L W +R
Sbjct: 88 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRER-----PESQPPLDWPKRQ 142
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+IA+G+A+GL YLH+ DP IIHRD+K++N+L+ ++ A + DF L+ + D
Sbjct: 143 RIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA-KLMDYKDXHVXX 201
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQS--LVTWAT 178
V GT G+ APEY TG+ + K+DV+ +GV+LLEL+TG++ D L+ W
Sbjct: 202 AVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVK 261
Query: 179 PKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXXLCVQYEADFRPNMSIVVKALQ 232
L E K+ VD L G+Y LC Q RP MS VV+ L+
Sbjct: 262 GLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 315
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 147 bits (371), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 85/234 (36%), Positives = 126/234 (53%), Gaps = 8/234 (3%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
M+S H N ++L G+C+ T R+L Y + +NGS+ L R + P L W +R
Sbjct: 80 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRER-----PESQPPLDWPKRQ 134
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+IA+G+A+GL YLH+ DP IIHRD+K++N+L+ ++ A + DF L+ + D
Sbjct: 135 RIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA-KLMDYKDXHVXX 193
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQS--LVTWAT 178
V G G+ APEY TG+ + K+DV+ +GV+LLEL+TG++ D L+ W
Sbjct: 194 AVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVK 253
Query: 179 PKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXXLCVQYEADFRPNMSIVVKALQ 232
L E K+ VD L G+Y LC Q RP MS VV+ L+
Sbjct: 254 GLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 307
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 138 bits (347), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 88/235 (37%), Positives = 127/235 (54%), Gaps = 14/235 (5%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++++ +HEN V+LLG+ DG L Y + NGSL D L G P LSW R
Sbjct: 83 VMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT------PPLSWHMRC 136
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
KIA GAA G+ +LHE H IHRDIKS+N+L+ + AKI+DF L+ + A + +
Sbjct: 137 KIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXS 193
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVD-HTLPRGQQSLVTWATP 179
R++GT Y APE A+ G++ KSD+YSFGVVLLE++TG VD H P Q L
Sbjct: 194 RIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREP--QLLLDIKEEI 250
Query: 180 KLSEDKVRQCVDARLGGDYPPXXXXXXXXXXXLCVQYEADFRPNMSIVVKALQPL 234
+ E + +D ++ D C+ + + RP++ V + LQ +
Sbjct: 251 EDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM 304
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 137 bits (345), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 88/235 (37%), Positives = 126/235 (53%), Gaps = 14/235 (5%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++++ +HEN V+LLG+ DG L Y + NGSL D L G P LSW R
Sbjct: 83 VMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT------PPLSWHMRC 136
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
KIA GAA G+ +LHE H IHRDIKS+N+L+ + AKI+DF L+ + A +
Sbjct: 137 KIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXX 193
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVD-HTLPRGQQSLVTWATP 179
R++GT Y APE A+ G++ KSD+YSFGVVLLE++TG VD H P Q L
Sbjct: 194 RIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREP--QLLLDIKEEI 250
Query: 180 KLSEDKVRQCVDARLGGDYPPXXXXXXXXXXXLCVQYEADFRPNMSIVVKALQPL 234
+ E + +D ++ D C+ + + RP++ V + LQ +
Sbjct: 251 EDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM 304
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 137 bits (344), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 77/169 (45%), Positives = 104/169 (61%), Gaps = 11/169 (6%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
+ ++ +HEN V+LLG+ DG L Y + NGSL D L G P LSW R
Sbjct: 74 VXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGT------PPLSWHXRC 127
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
KIA GAA G+ +LHE H IHRDIKS+N+L+ + AKI+DF L+ + A + +
Sbjct: 128 KIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXS 184
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVD-HTLPR 168
R++GT Y APE A+ G++ KSD+YSFGVVLLE++TG VD H P+
Sbjct: 185 RIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQ 232
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 137 bits (344), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 77/169 (45%), Positives = 104/169 (61%), Gaps = 11/169 (6%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++++ +HEN V+LLG+ DG L Y + NGSL D L G P LSW R
Sbjct: 77 VMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT------PPLSWHMRC 130
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
KIA GAA G+ +LHE H IHRDIKS+N+L+ + AKI+DF L+ + A +
Sbjct: 131 KIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXX 187
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVD-HTLPR 168
R++GT Y APE A+ G++ KSD+YSFGVVLLE++TG VD H P+
Sbjct: 188 RIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQ 235
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 98.2 bits (243), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 87/169 (51%), Gaps = 22/169 (13%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
+ + LKH N + L G C+ + L EFA G L+ +L G++ P +++W
Sbjct: 59 LFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKR----IPPDILVNW---- 110
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLI--------FDDDVAKIADFDLSNQAPD 112
AV A+G+ YLH++A IIHRD+KSSN+LI + + KI DF L+ +
Sbjct: 111 --AVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLARE--- 165
Query: 113 MAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
R G + + APE + SDV+S+GV+L ELLTG P
Sbjct: 166 -WHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVP 213
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 110/243 (45%), Gaps = 34/243 (13%)
Query: 2 VSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVK 61
+SR+ H N V+L G C++ V+ E+A GSL+++LHG A+P P + +
Sbjct: 56 LSRVNHPNIVKLYGACLNPVCLVM--EYAEGGSLYNVLHG------AEPLPYYTAAHAMS 107
Query: 62 IAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIF-DDDVAKIADFDLSNQAPDMAARLHST 120
+ ++G+ YLH +IHRD+K N+L+ V KI DF A D+ + H T
Sbjct: 108 WCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDF---GTACDI--QTHMT 162
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPK 180
G+ + APE + K DV+S+G++L E++T RKP D G + WA
Sbjct: 163 NNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEI--GGPAFRIMWAV-- 218
Query: 181 LSEDKVRQCVDARLGGDYPPXXXXXXXXXXXL---CVQYEADFRPNMSIVVKALQPLLNA 237
G PP L C + RP+M +VK + L+
Sbjct: 219 -------------HNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRY 265
Query: 238 RPG 240
PG
Sbjct: 266 FPG 268
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 110/243 (45%), Gaps = 34/243 (13%)
Query: 2 VSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVK 61
+SR+ H N V+L G C++ V+ E+A GSL+++LHG A+P P + +
Sbjct: 55 LSRVNHPNIVKLYGACLNPVCLVM--EYAEGGSLYNVLHG------AEPLPYYTAAHAMS 106
Query: 62 IAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIF-DDDVAKIADFDLSNQAPDMAARLHST 120
+ ++G+ YLH +IHRD+K N+L+ V KI DF A D+ + H T
Sbjct: 107 WCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDF---GTACDI--QTHMT 161
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPK 180
G+ + APE + K DV+S+G++L E++T RKP D G + WA
Sbjct: 162 NNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEI--GGPAFRIMWAV-- 217
Query: 181 LSEDKVRQCVDARLGGDYPPXXXXXXXXXXXL---CVQYEADFRPNMSIVVKALQPLLNA 237
G PP L C + RP+M +VK + L+
Sbjct: 218 -------------HNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRY 264
Query: 238 RPG 240
PG
Sbjct: 265 FPG 267
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 116/246 (47%), Gaps = 26/246 (10%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ RL+H N V +G + + E+ S GSL+ +LH + G + L ++R+
Sbjct: 87 IMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLH-KSGAREQ-----LDERRRL 140
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+A AKG+ YLH + +P I+HRD+KS N+L+ K+ DF LS + L S
Sbjct: 141 SMAYDVAKGMNYLHNR-NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLK--ASXFLXSK 197
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPK 180
GT + APE N KSDVYSFGV+L EL T ++P + P + V + +
Sbjct: 198 XAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKR 257
Query: 181 LSEDK-VRQCVDARLGGDYPPXXXXXXXXXXXLCVQYEADFRPNMSIVVKALQPLLNARP 239
L + + V A + G C E RP+ + ++ L+PL+ +
Sbjct: 258 LEIPRNLNPQVAAIIEG----------------CWTNEPWKRPSFATIMDLLRPLIKSAV 301
Query: 240 GPAGES 245
P S
Sbjct: 302 PPPNRS 307
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 94.0 bits (232), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 116/246 (47%), Gaps = 26/246 (10%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ RL+H N V +G + + E+ S GSL+ +LH + G + L ++R+
Sbjct: 87 IMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLH-KSGAREQ-----LDERRRL 140
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+A AKG+ YLH + +P I+HR++KS N+L+ K+ DF LS + L S
Sbjct: 141 SMAYDVAKGMNYLHNR-NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLK--ASTFLSSK 197
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPK 180
GT + APE N KSDVYSFGV+L EL T ++P + P + V + +
Sbjct: 198 SAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKR 257
Query: 181 LSEDK-VRQCVDARLGGDYPPXXXXXXXXXXXLCVQYEADFRPNMSIVVKALQPLLNARP 239
L + + V A + G C E RP+ + ++ L+PL+ +
Sbjct: 258 LEIPRNLNPQVAAIIEG----------------CWTNEPWKRPSFATIMDLLRPLIKSAV 301
Query: 240 GPAGES 245
P S
Sbjct: 302 PPPNRS 307
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 108/244 (44%), Gaps = 24/244 (9%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDIL--HGRKGVKGAQPGP--VLSW 56
+++ L+HE+ V+ G CV+G ++ +E+ +G L+ L HG V A+ P L+
Sbjct: 68 LLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQ 127
Query: 57 QQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAAR 116
Q + IA A G+ YL A H +HRD+ + N L+ ++ + KI DF +S
Sbjct: 128 SQMLHIAQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYY 184
Query: 117 LHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKPVDHTLPRGQQSLVT 175
+ + PE M + +SDV+S GVVL E+ T G++P
Sbjct: 185 RVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQP-------------- 230
Query: 176 WATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXXLCVQYEADFRPNMSIVVKALQPLL 235
W +LS ++V +C+ P C Q E R N+ + LQ L
Sbjct: 231 WY--QLSNNEVIECITQGRVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLA 288
Query: 236 NARP 239
A P
Sbjct: 289 KASP 292
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 81/159 (50%), Gaps = 10/159 (6%)
Query: 6 KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRK--GVKGA-----QPGPVLSWQQ 58
KH+N + LLG C + E+AS G+L + L R+ G++ + P LS +
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKD 151
Query: 59 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLH 118
V A A+G+EYL K IHRD+ + NVL+ +D+V KIADF L+ +
Sbjct: 152 LVSCAYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKK 208
Query: 119 STRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT 157
+T + APE +SDV+SFGV+L E+ T
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 84.0 bits (206), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 81/159 (50%), Gaps = 10/159 (6%)
Query: 6 KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRK--GVKGA-----QPGPVLSWQQ 58
KH+N + LLG C + E+AS G+L + L R+ G++ + P LS +
Sbjct: 81 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 140
Query: 59 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLH 118
V A A+G+EYL K IHRD+ + NVL+ +D+V KIADF L+ +
Sbjct: 141 LVSCAYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 197
Query: 119 STRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT 157
+T + APE +SDV+SFGV+L E+ T
Sbjct: 198 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 84.0 bits (206), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 81/159 (50%), Gaps = 10/159 (6%)
Query: 6 KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRK--GVKGA-----QPGPVLSWQQ 58
KH+N + LLG C + E+AS G+L + L R+ G++ + P LS +
Sbjct: 85 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 144
Query: 59 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLH 118
V A A+G+EYL K IHRD+ + NVL+ +D+V KIADF L+ +
Sbjct: 145 LVSCAYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 201
Query: 119 STRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT 157
+T + APE +SDV+SFGV+L E+ T
Sbjct: 202 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 84.0 bits (206), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 81/159 (50%), Gaps = 10/159 (6%)
Query: 6 KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRK--GVKGA-----QPGPVLSWQQ 58
KH+N + LLG C + E+AS G+L + L R+ G++ + P LS +
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 151
Query: 59 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLH 118
V A A+G+EYL K IHRD+ + NVL+ +D+V KIADF L+ +
Sbjct: 152 LVSCAYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 208
Query: 119 STRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT 157
+T + APE +SDV+SFGV+L E+ T
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 84.0 bits (206), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 81/159 (50%), Gaps = 10/159 (6%)
Query: 6 KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRK--GVKGA-----QPGPVLSWQQ 58
KH+N + LLG C + E+AS G+L + L R+ G++ + P LS +
Sbjct: 84 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 143
Query: 59 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLH 118
V A A+G+EYL K IHRD+ + NVL+ +D+V KIADF L+ +
Sbjct: 144 LVSCAYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 200
Query: 119 STRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT 157
+T + APE +SDV+SFGV+L E+ T
Sbjct: 201 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 84.0 bits (206), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 80/159 (50%), Gaps = 10/159 (6%)
Query: 6 KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRK--GVK-----GAQPGPVLSWQQ 58
KH+N + LLG C + E+AS G+L + L R+ G++ P LS +
Sbjct: 77 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKD 136
Query: 59 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLH 118
V A A+G+EYL K IHRD+ + NVL+ +D+V KIADF L+ +
Sbjct: 137 LVSCAYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 193
Query: 119 STRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT 157
+T + APE +SDV+SFGV+L E+ T
Sbjct: 194 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 84.0 bits (206), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 80/159 (50%), Gaps = 10/159 (6%)
Query: 6 KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRK--GVK-----GAQPGPVLSWQQ 58
KH+N + LLG C + E+AS G+L + L R+ G++ P LS +
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKD 151
Query: 59 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLH 118
V A A+G+EYL K IHRD+ + NVL+ +D+V KIADF L+ +
Sbjct: 152 LVSCAYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 208
Query: 119 STRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT 157
+T + APE +SDV+SFGV+L E+ T
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 81/159 (50%), Gaps = 10/159 (6%)
Query: 6 KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRK--GVKGA-----QPGPVLSWQQ 58
KH+N + LLG C + E+AS G+L + L R+ G++ + P LS +
Sbjct: 133 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 192
Query: 59 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLH 118
V A A+G+EYL K IHRD+ + NVL+ +D+V KIADF L+ +
Sbjct: 193 LVSCAYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 249
Query: 119 STRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT 157
+T + APE +SDV+SFGV+L E+ T
Sbjct: 250 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 81/159 (50%), Gaps = 10/159 (6%)
Query: 6 KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRK--GVKGA-----QPGPVLSWQQ 58
KH+N + LLG C + E+AS G+L + L R+ G++ + P LS +
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKD 151
Query: 59 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLH 118
V A A+G+EYL A IHRD+ + NVL+ +D+V KIADF L+ +
Sbjct: 152 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 208
Query: 119 STRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT 157
+T + APE +SDV+SFGV+L E+ T
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 86/164 (52%), Gaps = 17/164 (10%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +L+HE VQL V + E+ S GSL D L G + G L Q V
Sbjct: 59 VMKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKG-------ETGKYLRLPQLV 110
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+A A G+ Y+ + +HRD++++N+L+ ++ V K+ADF L+ D ++
Sbjct: 111 DMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE---YTA 164
Query: 121 RVLGTF--GYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
R F + APE A+ G+ KSDV+SFG++L EL T GR P
Sbjct: 165 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 208
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 105/247 (42%), Gaps = 27/247 (10%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDIL--HGRKGV-----KGAQPGPV 53
+++ L+HE+ V+ G C DG ++ +E+ +G L+ L HG + + Q
Sbjct: 70 LLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGE 129
Query: 54 LSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDM 113
L Q + IA A G+ YL A H +HRD+ + N L+ + + KI DF +S
Sbjct: 130 LGLSQMLHIASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYST 186
Query: 114 AARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKPVDHTLPRGQQS 172
+ + PE M + +SDV+SFGV+L E+ T G++P
Sbjct: 187 DYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQP----------- 235
Query: 173 LVTWATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXXLCVQYEADFRPNMSIVVKALQ 232
W +LS +V +C+ + P C Q E R N+ + K L
Sbjct: 236 ---WF--QLSNTEVIECITQGRVLERPRVCPKEVYDVMLGCWQREPQQRLNIKEIYKILH 290
Query: 233 PLLNARP 239
L A P
Sbjct: 291 ALGKATP 297
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 86/164 (52%), Gaps = 17/164 (10%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +L+HE VQL V + E+ S GSL D L G + G L Q V
Sbjct: 232 VMKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKG-------ETGKYLRLPQLV 283
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+A A G+ Y+ + +HRD++++N+L+ ++ V K+ADF L+ D ++
Sbjct: 284 DMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE---YTA 337
Query: 121 RVLGTF--GYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
R F + APE A+ G+ KSDV+SFG++L EL T GR P
Sbjct: 338 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 381
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 86/164 (52%), Gaps = 17/164 (10%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +L+HE VQL V + E+ S GSL D L G + G L Q V
Sbjct: 66 VMKKLRHEKLVQLYA-VVSEEPIYIVIEYMSKGSLLDFLKG-------EMGKYLRLPQLV 117
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+A A G+ Y+ + +HRD++++N+L+ ++ V K+ADF L+ D ++
Sbjct: 118 DMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE---YTA 171
Query: 121 RVLGTF--GYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
R F + APE A+ G+ KSDV+SFG++L EL T GR P
Sbjct: 172 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 86/164 (52%), Gaps = 17/164 (10%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +L+HE VQL V + E+ S GSL D L G + G L Q V
Sbjct: 232 VMKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKG-------ETGKYLRLPQLV 283
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+A A G+ Y+ + +HRD++++N+L+ ++ V K+ADF L+ D ++
Sbjct: 284 DMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE---YTA 337
Query: 121 RVLGTF--GYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
R F + APE A+ G+ KSDV+SFG++L EL T GR P
Sbjct: 338 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 381
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 86/164 (52%), Gaps = 17/164 (10%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +L+HE VQL V + E+ S GSL D L G + G L Q V
Sbjct: 55 VMKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKG-------EMGKYLRLPQLV 106
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+A A G+ Y+ + +HRD++++N+L+ ++ V K+ADF L+ D ++
Sbjct: 107 DMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE---YTA 160
Query: 121 RVLGTF--GYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
R F + APE A+ G+ KSDV+SFG++L EL T GR P
Sbjct: 161 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 204
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 86/164 (52%), Gaps = 17/164 (10%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +L+HE VQL V + E+ S GSL D L G + G L Q V
Sbjct: 57 VMKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKG-------EMGKYLRLPQLV 108
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+A A G+ Y+ + +HRD++++N+L+ ++ V K+ADF L+ D ++
Sbjct: 109 DMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE---YTA 162
Query: 121 RVLGTF--GYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
R F + APE A+ G+ KSDV+SFG++L EL T GR P
Sbjct: 163 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 206
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 87/173 (50%), Gaps = 15/173 (8%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ + +H N + +GY + ++ SL+ LH + ++ +
Sbjct: 73 VLRKTRHVNILLFMGYST-APQLAIVTQWCEGSSLYHHLHASE--------TKFEMKKLI 123
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
IA A+G++YLH K+ IIHRD+KS+N+ + +D+ KI DF L+ + +
Sbjct: 124 DIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFE 180
Query: 121 RVLGTFGYHAPEYAMTGQLNA---KSDVYSFGVVLLELLTGRKPVDHTLPRGQ 170
++ G+ + APE N +SDVY+FG+VL EL+TG+ P + R Q
Sbjct: 181 QLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 233
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 82/159 (51%), Gaps = 10/159 (6%)
Query: 6 KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRK--GVKGAQ-----PGPVLSWQQ 58
KH+N + LLG C + E+AS G+L + L R+ G++ + P ++++
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKD 158
Query: 59 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLH 118
V A+G+EYL A IHRD+ + NVL+ +++V KIADF L+ ++
Sbjct: 159 LVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKK 215
Query: 119 STRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT 157
+T + APE +SDV+SFGV++ E+ T
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 86/164 (52%), Gaps = 17/164 (10%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +L+HE VQL V + E+ S GSL D L G + G L Q V
Sbjct: 66 VMKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKG-------EMGKYLRLPQLV 117
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+A A G+ Y+ + +HRD++++N+L+ ++ V K+ADF L+ D ++
Sbjct: 118 DMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE---YTA 171
Query: 121 RVLGTF--GYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
R F + APE A+ G+ KSDV+SFG++L EL T GR P
Sbjct: 172 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 86/164 (52%), Gaps = 17/164 (10%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +L+HE VQL V + E+ S GSL D L G + G L Q V
Sbjct: 315 VMKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKG-------ETGKYLRLPQLV 366
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+A A G+ Y+ + +HRD++++N+L+ ++ V K+ADF L+ D ++
Sbjct: 367 DMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE---YTA 420
Query: 121 RVLGTF--GYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
R F + APE A+ G+ KSDV+SFG++L EL T GR P
Sbjct: 421 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 464
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 88/173 (50%), Gaps = 15/173 (8%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ + +H N + +GY ++ ++ SL+ LH + ++ +
Sbjct: 73 VLRKTRHVNILLFMGYSTKPQLAIVT-QWCEGSSLYHHLHASE--------TKFEMKKLI 123
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
IA A+G++YLH K+ IIHRD+KS+N+ + +D+ KI DF L+ + +
Sbjct: 124 DIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFE 180
Query: 121 RVLGTFGYHAPEYAMTGQLNA---KSDVYSFGVVLLELLTGRKPVDHTLPRGQ 170
++ G+ + APE N +SDVY+FG+VL EL+TG+ P + R Q
Sbjct: 181 QLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 233
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 86/164 (52%), Gaps = 17/164 (10%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +L+HE VQL V + E+ S GSL D L G + G L Q V
Sbjct: 66 VMKKLRHEKLVQLYA-VVSEEPIYIVCEYMSKGSLLDFLKG-------EMGKYLRLPQLV 117
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+A A G+ Y+ + +HRD++++N+L+ ++ V K+ADF L+ D ++
Sbjct: 118 DMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE---YTA 171
Query: 121 RVLGTF--GYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
R F + APE A+ G+ KSDV+SFG++L EL T GR P
Sbjct: 172 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 87/164 (53%), Gaps = 17/164 (10%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +L+HE VQL + ++ E+ S GSL D L G + G L Q V
Sbjct: 232 VMKKLRHEKLVQLYAVVSEEPIYIVG-EYMSKGSLLDFLKG-------ETGKYLRLPQLV 283
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+A A G+ Y+ + +HRD++++N+L+ ++ V K+ADF L+ D ++
Sbjct: 284 DMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE---YTA 337
Query: 121 RVLGTF--GYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
R F + APE A+ G+ KSDV+SFG++L EL T GR P
Sbjct: 338 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 381
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 81.3 bits (199), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 86/164 (52%), Gaps = 17/164 (10%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +L+HE VQL + ++ E+ S GSL D L G + G L Q V
Sbjct: 56 VMKKLRHEKLVQLYAVVSEEPIXIVT-EYMSKGSLLDFLKG-------ETGKYLRLPQLV 107
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+A A G+ Y+ + +HRD++++N+L+ ++ V K+ADF L+ D +
Sbjct: 108 DMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEX---TA 161
Query: 121 RVLGTF--GYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
R F + APE A+ G+ KSDV+SFG++L EL T GR P
Sbjct: 162 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 205
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 82/159 (51%), Gaps = 10/159 (6%)
Query: 6 KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRK--GVKGAQ-----PGPVLSWQQ 58
KH+N + LLG C + E+AS G+L + L R+ G++ + P ++++
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 59 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLH 118
V A+G+EYL A IHRD+ + NVL+ +++V KIADF L+ ++
Sbjct: 159 LVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKK 215
Query: 119 STRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT 157
+T + APE +SDV+SFGV++ E+ T
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 83/159 (52%), Gaps = 10/159 (6%)
Query: 6 KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRK--GVKGAQ-----PGPVLSWQQ 58
KH+N + LLG C + E+AS G+L + L R+ G++ + P ++++
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 59 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLH 118
V A+G+EYL A IHRD+ + NVL+ +++V KIADF L+ ++ +
Sbjct: 159 LVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKN 215
Query: 119 STRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT 157
+T + APE +SDV+SFGV++ E+ T
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 82/159 (51%), Gaps = 10/159 (6%)
Query: 6 KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRK--GVKGAQ-----PGPVLSWQQ 58
KH+N + LLG C + E+AS G+L + L R+ G++ + P ++++
Sbjct: 145 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 204
Query: 59 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLH 118
V A+G+EYL A IHRD+ + NVL+ +++V KIADF L+ ++
Sbjct: 205 LVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 261
Query: 119 STRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT 157
+T + APE +SDV+SFGV++ E+ T
Sbjct: 262 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 86/164 (52%), Gaps = 17/164 (10%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +++HE VQL V + E+ S GSL D L G + G L Q V
Sbjct: 66 VMKKIRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKG-------EMGKYLRLPQLV 117
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+A A G+ Y+ + +HRD++++N+L+ ++ V K+ADF L+ D ++
Sbjct: 118 DMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE---YTA 171
Query: 121 RVLGTF--GYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
R F + APE A+ G+ KSDV+SFG++L EL T GR P
Sbjct: 172 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 85/164 (51%), Gaps = 17/164 (10%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +L+HE VQL V + E+ S GSL D L G + G L Q V
Sbjct: 66 VMKKLRHEKLVQLYA-VVSEEPIYIVIEYMSKGSLLDFLKG-------EMGKYLRLPQLV 117
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+A A G+ Y+ + +HRD++++N+L+ ++ V K+ADF L+ D +
Sbjct: 118 DMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEX---TA 171
Query: 121 RVLGTF--GYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
R F + APE A+ G+ KSDV+SFG++L EL T GR P
Sbjct: 172 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 82/159 (51%), Gaps = 10/159 (6%)
Query: 6 KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRK--GVKGAQ-----PGPVLSWQQ 58
KH+N + LLG C + E+AS G+L + L R+ G++ + P ++++
Sbjct: 86 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 145
Query: 59 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLH 118
V A+G+EYL A IHRD+ + NVL+ +++V KIADF L+ ++
Sbjct: 146 LVSCTYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKK 202
Query: 119 STRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT 157
+T + APE +SDV+SFGV++ E+ T
Sbjct: 203 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 80.5 bits (197), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 85/164 (51%), Gaps = 17/164 (10%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +L+HE VQL V + E+ S GSL D L G + G L Q V
Sbjct: 233 VMKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKG-------EMGKYLRLPQLV 284
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+A A G+ Y+ + +HRD++++N+L+ ++ V K+ADF L D ++
Sbjct: 285 DMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLGRLIEDNE---YTA 338
Query: 121 RVLGTF--GYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
R F + APE A+ G+ KSDV+SFG++L EL T GR P
Sbjct: 339 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 382
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 80.5 bits (197), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 82/159 (51%), Gaps = 10/159 (6%)
Query: 6 KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRK--GVKGAQ-----PGPVLSWQQ 58
KH+N + LLG C + E+AS G+L + L R+ G++ + P ++++
Sbjct: 88 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 147
Query: 59 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLH 118
V A+G+EYL A IHRD+ + NVL+ +++V KIADF L+ ++
Sbjct: 148 LVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 204
Query: 119 STRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT 157
+T + APE +SDV+SFGV++ E+ T
Sbjct: 205 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 80.5 bits (197), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 82/159 (51%), Gaps = 10/159 (6%)
Query: 6 KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRK--GVKGAQ-----PGPVLSWQQ 58
KH+N + LLG C + E+AS G+L + L R+ G++ + P ++++
Sbjct: 91 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 150
Query: 59 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLH 118
V A+G+EYL A IHRD+ + NVL+ +++V KIADF L+ ++
Sbjct: 151 LVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 207
Query: 119 STRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT 157
+T + APE +SDV+SFGV++ E+ T
Sbjct: 208 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 80.5 bits (197), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 85/164 (51%), Gaps = 17/164 (10%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +L+HE VQL V + E+ S GSL D L G + G L Q V
Sbjct: 66 VMKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKG-------EMGKYLRLPQLV 117
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+A A G+ Y+ + +HRD+ ++N+L+ ++ V K+ADF L+ D ++
Sbjct: 118 DMAAQIASGMAYVERM---NYVHRDLAAANILVGENLVCKVADFGLARLIEDNE---YTA 171
Query: 121 RVLGTF--GYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
R F + APE A+ G+ KSDV+SFG++L EL T GR P
Sbjct: 172 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 82/159 (51%), Gaps = 10/159 (6%)
Query: 6 KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRK--GVKGAQ-----PGPVLSWQQ 58
KH+N + LLG C + E+AS G+L + L R+ G++ + P ++++
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 59 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLH 118
V A+G+EYL A IHRD+ + NVL+ +++V KIADF L+ ++
Sbjct: 159 LVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 119 STRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT 157
+T + APE +SDV+SFGV++ E+ T
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 85/164 (51%), Gaps = 17/164 (10%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +L+HE VQL V + E+ S G L D L G + G L Q V
Sbjct: 66 VMKKLRHEKLVQLYA-VVSEEPIYIVMEYMSKGCLLDFLKG-------EMGKYLRLPQLV 117
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+A A G+ Y+ + +HRD++++N+L+ ++ V K+ADF L+ D ++
Sbjct: 118 DMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE---YTA 171
Query: 121 RVLGTF--GYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
R F + APE A+ G+ KSDV+SFG++L EL T GR P
Sbjct: 172 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 113/242 (46%), Gaps = 38/242 (15%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++S L H N V+L G + V+ EF G L+ L + A P + W ++
Sbjct: 76 IMSNLNHPNIVKLYGLMHNPPRMVM--EFVPCGDLYHRL-----LDKAHP---IKWSVKL 125
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLI--FDDD---VAKIADFDLSNQAPDMAA 115
++ + A G+EY+ + +P I+HRD++S N+ + D++ AK+ADF LS Q+
Sbjct: 126 RLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQS----- 179
Query: 116 RLHSTR-VLGTFGYHAPEY--AMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQS 172
+HS +LG F + APE A K+D YSF ++L +LTG P D G+
Sbjct: 180 -VHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDE-YSYGKIK 237
Query: 173 LVTWATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXXLCVQYEADFRPNMSIVVKALQ 232
+ + E+ +R + D PP LC + RP+ S +VK L
Sbjct: 238 FINM----IREEGLRPTIPE----DCPP----RLRNVIELCWSGDPKKRPHFSYIVKELS 285
Query: 233 PL 234
L
Sbjct: 286 EL 287
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 84/169 (49%), Gaps = 12/169 (7%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDIL--HG-----RKGVKGAQPGPV 53
+++ L+H++ V+ G C +G ++ +E+ +G L+ L HG G + PGP
Sbjct: 73 LLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGP- 131
Query: 54 LSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDM 113
L Q + +A A G+ YL A H +HRD+ + N L+ V KI DF +S
Sbjct: 132 LGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYST 188
Query: 114 AARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
R + + PE + + +SDV+SFGVVL E+ T G++P
Sbjct: 189 DYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 237
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 82/159 (51%), Gaps = 10/159 (6%)
Query: 6 KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRK--GVKGAQ-----PGPVLSWQQ 58
KH+N + LLG C + E+AS G+L + L R+ G++ + P ++++
Sbjct: 99 KHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 59 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLH 118
V A+G+EYL A IHRD+ + NVL+ +++V KIADF L+ ++
Sbjct: 159 LVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 119 STRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT 157
+T + APE +SDV+SFGV++ E+ T
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 85/164 (51%), Gaps = 17/164 (10%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +L+HE VQL V + E+ S G L D L G + G L Q V
Sbjct: 66 VMKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGCLLDFLKG-------EMGKYLRLPQLV 117
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+A A G+ Y+ + +HRD++++N+L+ ++ V K+ADF L+ D ++
Sbjct: 118 DMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE---YTA 171
Query: 121 RVLGTF--GYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
R F + APE A+ G+ KSDV+SFG++L EL T GR P
Sbjct: 172 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 84/169 (49%), Gaps = 12/169 (7%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDIL--HG-----RKGVKGAQPGPV 53
+++ L+H++ V+ G C +G ++ +E+ +G L+ L HG G + PGP
Sbjct: 67 LLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGP- 125
Query: 54 LSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDM 113
L Q + +A A G+ YL A H +HRD+ + N L+ V KI DF +S
Sbjct: 126 LGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYST 182
Query: 114 AARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
R + + PE + + +SDV+SFGVVL E+ T G++P
Sbjct: 183 DYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 231
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 84/169 (49%), Gaps = 12/169 (7%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDIL--HG-----RKGVKGAQPGPV 53
+++ L+H++ V+ G C +G ++ +E+ +G L+ L HG G + PGP
Sbjct: 96 LLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGP- 154
Query: 54 LSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDM 113
L Q + +A A G+ YL A H +HRD+ + N L+ V KI DF +S
Sbjct: 155 LGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYST 211
Query: 114 AARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
R + + PE + + +SDV+SFGVVL E+ T G++P
Sbjct: 212 DYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 260
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 82/159 (51%), Gaps = 10/159 (6%)
Query: 6 KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRK--GVKGAQ-----PGPVLSWQQ 58
KH+N + LLG C + E+AS G+L + L R+ G++ + P ++++
Sbjct: 99 KHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 59 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLH 118
V A+G+EYL A IHRD+ + NVL+ +++V KIADF L+ ++
Sbjct: 159 LVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 119 STRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT 157
+T + APE +SDV+SFGV++ E+ T
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 86/164 (52%), Gaps = 17/164 (10%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +L+HE VQL V + E+ + GSL D L G + G L Q V
Sbjct: 63 VMKKLRHEKLVQLYA-VVSEEPIYIVTEYMNKGSLLDFLKG-------ETGKYLRLPQLV 114
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
++ A G+ Y+ + +HRD++++N+L+ ++ V K+ADF L+ D ++
Sbjct: 115 DMSAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE---YTA 168
Query: 121 RVLGTF--GYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
R F + APE A+ G+ KSDV+SFG++L EL T GR P
Sbjct: 169 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 212
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 113/242 (46%), Gaps = 38/242 (15%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++S L H N V+L G + V+ EF G L+ L + A P + W ++
Sbjct: 76 IMSNLNHPNIVKLYGLMHNPPRMVM--EFVPCGDLYHRL-----LDKAHP---IKWSVKL 125
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLI--FDDD---VAKIADFDLSNQAPDMAA 115
++ + A G+EY+ + +P I+HRD++S N+ + D++ AK+ADF LS Q+
Sbjct: 126 RLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQS----- 179
Query: 116 RLHSTR-VLGTFGYHAPEY--AMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQS 172
+HS +LG F + APE A K+D YSF ++L +LTG P D G+
Sbjct: 180 -VHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDE-YSYGKIK 237
Query: 173 LVTWATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXXLCVQYEADFRPNMSIVVKALQ 232
+ + E+ +R + D PP LC + RP+ S +VK L
Sbjct: 238 FINM----IREEGLRPTIPE----DCPP----RLRNVIELCWSGDPKKRPHFSYIVKELS 285
Query: 233 PL 234
L
Sbjct: 286 EL 287
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 87/173 (50%), Gaps = 15/173 (8%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ + +H N + +GY ++ ++ SL+ LH + ++ +
Sbjct: 61 VLRKTRHVNILLFMGYSTKPQLAIVT-QWCEGSSLYHHLHASE--------TKFEMKKLI 111
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
IA A+G++YLH K+ IIHRD+KS+N+ + +D+ KI DF L+ +
Sbjct: 112 DIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFE 168
Query: 121 RVLGTFGYHAPEYAMTGQLNA---KSDVYSFGVVLLELLTGRKPVDHTLPRGQ 170
++ G+ + APE N +SDVY+FG+VL EL+TG+ P + R Q
Sbjct: 169 QLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 221
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 82/159 (51%), Gaps = 10/159 (6%)
Query: 6 KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRK--GVKGAQ-----PGPVLSWQQ 58
KH+N + LLG C + E+AS G+L + L R+ G++ + P ++++
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 59 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLH 118
V A+G+EYL A IHRD+ + NVL+ +++V +IADF L+ ++
Sbjct: 159 LVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKK 215
Query: 119 STRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT 157
+T + APE +SDV+SFGV++ E+ T
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 89/165 (53%), Gaps = 21/165 (12%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRV-LAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQR 59
++++L+H N VQLLG V+ + + E+ + GSL D L R VL
Sbjct: 52 VMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR-------SVLGGDCL 104
Query: 60 VKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHS 119
+K ++ + +EYL + +HRD+ + NVL+ +D+VAK++DF L+ +A S
Sbjct: 105 LKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS-------S 154
Query: 120 TRVLGTF--GYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
T+ G + APE + + KSDV+SFG++L E+ + GR P
Sbjct: 155 TQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP 199
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 89/165 (53%), Gaps = 21/165 (12%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRV-LAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQR 59
++++L+H N VQLLG V+ + + E+ + GSL D L R VL
Sbjct: 67 VMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSR-------GRSVLGGDCL 119
Query: 60 VKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHS 119
+K ++ + +EYL + +HRD+ + NVL+ +D+VAK++DF L+ +A S
Sbjct: 120 LKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS-------S 169
Query: 120 TRVLGTF--GYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
T+ G + APE + + KSDV+SFG++L E+ + GR P
Sbjct: 170 TQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP 214
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 89/165 (53%), Gaps = 21/165 (12%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRV-LAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQR 59
++++L+H N VQLLG V+ + + E+ + GSL D L R VL
Sbjct: 239 VMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR-------SVLGGDCL 291
Query: 60 VKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHS 119
+K ++ + +EYL + +HRD+ + NVL+ +D+VAK++DF L+ +A S
Sbjct: 292 LKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS-------S 341
Query: 120 TRVLGTF--GYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
T+ G + APE + + KSDV+SFG++L E+ + GR P
Sbjct: 342 TQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP 386
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 88/165 (53%), Gaps = 21/165 (12%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRV-LAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQR 59
++++L+H N VQLLG V+ + + E+ + GSL D L R VL
Sbjct: 58 VMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR-------SVLGGDCL 110
Query: 60 VKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHS 119
+K ++ + +EYL + +HRD+ + NVL+ +D+VAK++DF L+ +A S
Sbjct: 111 LKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS-------S 160
Query: 120 TRVLGTF--GYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
T+ G + APE + KSDV+SFG++L E+ + GR P
Sbjct: 161 TQDTGKLPVKWTAPEALREAAFSTKSDVWSFGILLWEIYSFGRVP 205
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 85/164 (51%), Gaps = 17/164 (10%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +L+HE VQL V + E+ + GSL D L G + G L Q V
Sbjct: 63 VMKKLRHEKLVQLYA-VVSEEPIYIVTEYMNKGSLLDFLKG-------ETGKYLRLPQLV 114
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
++ A G+ Y+ + +HRD++++N+L+ ++ V K+ADF L+ D +
Sbjct: 115 DMSAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE---WTA 168
Query: 121 RVLGTF--GYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
R F + APE A+ G+ KSDV+SFG++L EL T GR P
Sbjct: 169 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 212
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 112/242 (46%), Gaps = 38/242 (15%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++S L H N V+L G + V+ EF G L+ L + A P + W ++
Sbjct: 76 IMSNLNHPNIVKLYGLMHNPPRMVM--EFVPCGDLYHRL-----LDKAHP---IKWSVKL 125
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLI--FDDD---VAKIADFDLSNQAPDMAA 115
++ + A G+EY+ + +P I+HRD++S N+ + D++ AK+ADF S Q+
Sbjct: 126 RLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQS----- 179
Query: 116 RLHSTR-VLGTFGYHAPEY--AMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQS 172
+HS +LG F + APE A K+D YSF ++L +LTG P D G+
Sbjct: 180 -VHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDE-YSYGKIK 237
Query: 173 LVTWATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXXLCVQYEADFRPNMSIVVKALQ 232
+ + E+ +R + D PP LC + RP+ S +VK L
Sbjct: 238 FINM----IREEGLRPTIPE----DCPP----RLRNVIELCWSGDPKKRPHFSYIVKELS 285
Query: 233 PL 234
L
Sbjct: 286 EL 287
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 81/159 (50%), Gaps = 10/159 (6%)
Query: 6 KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRK--GVKGAQ-----PGPVLSWQQ 58
KH+N + LLG C + +AS G+L + L R+ G++ + P ++++
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 59 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLH 118
V A+G+EYL A IHRD+ + NVL+ +++V KIADF L+ ++
Sbjct: 159 LVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 119 STRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT 157
+T + APE +SDV+SFGV++ E+ T
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 91/189 (48%), Gaps = 18/189 (9%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ + +H N + +GY ++ ++ SL+ LH ++ Q +
Sbjct: 85 VLRKTRHVNILLFMGYMTKDNLAIVT-QWCEGSSLYKHLHVQE--------TKFQMFQLI 135
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
IA A+G++YLH K +IIHRD+KS+N+ + + KI DF L+ +
Sbjct: 136 DIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVE 192
Query: 121 RVLGTFGYHAPEYAMTGQLNA---KSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVT-- 175
+ G+ + APE N +SDVYS+G+VL EL+TG P H R Q +
Sbjct: 193 QPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGR 252
Query: 176 -WATPKLSE 183
+A+P LS+
Sbjct: 253 GYASPDLSK 261
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 81/159 (50%), Gaps = 10/159 (6%)
Query: 6 KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRK--GVKGAQ-----PGPVLSWQQ 58
KH+N + LLG C + +AS G+L + L R+ G++ + P ++++
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 59 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLH 118
V A+G+EYL A IHRD+ + NVL+ +++V KIADF L+ ++
Sbjct: 159 LVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 119 STRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT 157
+T + APE +SDV+SFGV++ E+ T
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 85/165 (51%), Gaps = 13/165 (7%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +L H VQL G C++ L +EF +G L D L ++G+ A+ +
Sbjct: 58 VMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAET--------LL 109
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+ + +G+ YL E +IHRD+ + N L+ ++ V K++DF ++ D ST
Sbjct: 110 GMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLD-DQYTSST 165
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKPVDH 164
+ +PE + ++KSDV+SFGV++ E+ + G+ P ++
Sbjct: 166 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN 210
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 85/165 (51%), Gaps = 13/165 (7%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +L H VQL G C++ L +EF +G L D L ++G+ A+ +
Sbjct: 53 VMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAET--------LL 104
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+ + +G+ YL E +IHRD+ + N L+ ++ V K++DF ++ D ST
Sbjct: 105 GMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLD-DQYTSST 160
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKPVDH 164
+ +PE + ++KSDV+SFGV++ E+ + G+ P ++
Sbjct: 161 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN 205
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 85/165 (51%), Gaps = 13/165 (7%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +L H VQL G C++ L +EF +G L D L ++G+ A+ +
Sbjct: 55 VMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAET--------LL 106
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+ + +G+ YL E +IHRD+ + N L+ ++ V K++DF ++ D ST
Sbjct: 107 GMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLD-DQYTSST 162
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKPVDH 164
+ +PE + ++KSDV+SFGV++ E+ + G+ P ++
Sbjct: 163 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN 207
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 86/165 (52%), Gaps = 13/165 (7%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +L H VQL G C++ L +EF +G L D L ++G+ A+ +
Sbjct: 55 VMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAET--------LL 106
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+ + +G+ YL E + +IHRD+ + N L+ ++ V K++DF ++ D ST
Sbjct: 107 GMCLDVCEGMAYLEEAS---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLD-DQYTSST 162
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKPVDH 164
+ +PE + ++KSDV+SFGV++ E+ + G+ P ++
Sbjct: 163 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN 207
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 13/162 (8%)
Query: 4 RLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIA 63
+L H VQL G C++ L +EF +G L D L ++G+ A+ + +
Sbjct: 78 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAET--------LLGMC 129
Query: 64 VGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVL 123
+ +G+ YL E +IHRD+ + N L+ ++ V K++DF ++ D ST
Sbjct: 130 LDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTK 185
Query: 124 GTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKPVDH 164
+ +PE + ++KSDV+SFGV++ E+ + G+ P ++
Sbjct: 186 FPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN 227
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 86/164 (52%), Gaps = 17/164 (10%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +L+H+ V+L ++ E+ NGSL D L G+K L+ + +
Sbjct: 71 LMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIK-------LTINKLL 122
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+A A+G+ ++ E+ + IHRD++++N+L+ D KIADF L+ D ++
Sbjct: 123 DMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE---YTA 176
Query: 121 RVLGTF--GYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
R F + APE G KSDV+SFG++L E++T GR P
Sbjct: 177 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 220
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 86/164 (52%), Gaps = 17/164 (10%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +L+H+ V+L ++ E+ NGSL D L G+K L+ + +
Sbjct: 66 LMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIK-------LTINKLL 117
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+A A+G+ ++ E+ + IHRD++++N+L+ D KIADF L+ D ++
Sbjct: 118 DMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE---YTA 171
Query: 121 RVLGTF--GYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
R F + APE G KSDV+SFG++L E++T GR P
Sbjct: 172 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 215
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 86/164 (52%), Gaps = 17/164 (10%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +L+H+ V+L ++ E+ NGSL D L G+K L+ + +
Sbjct: 67 LMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIK-------LTINKLL 118
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+A A+G+ ++ E+ + IHRD++++N+L+ D KIADF L+ D ++
Sbjct: 119 DMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE---YTA 172
Query: 121 RVLGTF--GYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
R F + APE G KSDV+SFG++L E++T GR P
Sbjct: 173 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 216
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 94/189 (49%), Gaps = 29/189 (15%)
Query: 60 VKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHS 119
+ IA A+G++YLH K+ IIHRD+KS+N+ + +D KI DF L+ + +
Sbjct: 127 IDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQF 183
Query: 120 TRVLGTFGYHAPEYAMTGQLNA---KSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVT- 175
++ G+ + APE N +SDVY+FG+VL EL+TG+ P + R Q +
Sbjct: 184 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVG 243
Query: 176 --WATPKLSEDKVR-QCVDA--RLGGDYPPXXXXXXXXXXXLCVQYEADFRPNMSIVVKA 230
+ +P LS KVR C A RL + C++ + D RP ++ +
Sbjct: 244 RGYLSPDLS--KVRSNCPKAMKRLMAE---------------CLKKKRDERPLFPQILAS 286
Query: 231 LQPLLNARP 239
++ L + P
Sbjct: 287 IELLARSLP 295
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 94/189 (49%), Gaps = 29/189 (15%)
Query: 60 VKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHS 119
+ IA A+G++YLH K+ IIHRD+KS+N+ + +D KI DF L+ + +
Sbjct: 135 IDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQF 191
Query: 120 TRVLGTFGYHAPEYAMTGQLNA---KSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVT- 175
++ G+ + APE N +SDVY+FG+VL EL+TG+ P + R Q +
Sbjct: 192 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVG 251
Query: 176 --WATPKLSEDKVR-QCVDA--RLGGDYPPXXXXXXXXXXXLCVQYEADFRPNMSIVVKA 230
+ +P LS KVR C A RL + C++ + D RP ++ +
Sbjct: 252 RGYLSPDLS--KVRSNCPKAMKRLMAE---------------CLKKKRDERPLFPQILAS 294
Query: 231 LQPLLNARP 239
++ L + P
Sbjct: 295 IELLARSLP 303
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 115/248 (46%), Gaps = 38/248 (15%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ + +H N + +GY ++ ++ SL+ LH + + +
Sbjct: 57 VLRKTRHVNILLFMGYSTKPQLAIVT-QWCEGSSLYHHLHIIE--------TKFEMIKLI 107
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
IA A+G++YLH K+ IIHRD+KS+N+ + +D KI DF L+ + +
Sbjct: 108 DIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFE 164
Query: 121 RVLGTFGYHAPEYAMTGQLNA---KSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVT-- 175
++ G+ + APE N +SDVY+FG+VL EL+TG+ P + R Q +
Sbjct: 165 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGR 224
Query: 176 -WATPKLSEDKVR-QCVDA--RLGGDYPPXXXXXXXXXXXLCVQYEADFRPNMSIVVKAL 231
+ +P LS KVR C A RL + C++ + D RP ++ ++
Sbjct: 225 GYLSPDLS--KVRSNCPKAMKRLMAE---------------CLKKKRDERPLFPQILASI 267
Query: 232 QPLLNARP 239
+ L + P
Sbjct: 268 ELLARSLP 275
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 86/164 (52%), Gaps = 17/164 (10%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +L+H+ V+L ++ E+ NGSL D L G+K L+ + +
Sbjct: 61 LMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIK-------LTINKLL 112
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+A A+G+ ++ E+ + IHRD++++N+L+ D KIADF L+ D ++
Sbjct: 113 DMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE---YTA 166
Query: 121 RVLGTF--GYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
R F + APE G KSDV+SFG++L E++T GR P
Sbjct: 167 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 210
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 86/164 (52%), Gaps = 17/164 (10%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +L+H+ V+L ++ E+ NGSL D L G+K L+ + +
Sbjct: 56 LMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIK-------LTINKLL 107
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+A A+G+ ++ E+ + IHRD++++N+L+ D KIADF L+ D ++
Sbjct: 108 DMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE---YTA 161
Query: 121 RVLGTF--GYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
R F + APE G KSDV+SFG++L E++T GR P
Sbjct: 162 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 205
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 81/170 (47%), Gaps = 32/170 (18%)
Query: 5 LKHENFVQLLGYCVDGTS----RVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
+KHEN +Q +G GTS L F GSL D L V+SW +
Sbjct: 75 MKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKAN----------VVSWNELC 124
Query: 61 KIAVGAAKGLEYLHEKA-------DPHIIHRDIKSSNVLIFDDDVAKIADFDLS--NQAP 111
IA A+GL YLHE P I HRDIKS NVL+ ++ A IADF L+ +A
Sbjct: 125 HIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAG 184
Query: 112 DMAARLHSTRVLGTFGYHAPEYAMTGQLN------AKSDVYSFGVVLLEL 155
A H +GT Y APE + G +N + D+Y+ G+VL EL
Sbjct: 185 KSAGDTHGQ--VGTRRYMAPE-VLEGAINFQRDAFLRIDMYAMGLVLWEL 231
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 73/138 (52%), Gaps = 13/138 (9%)
Query: 25 LAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHR 84
+ E+ +L DI+H GP ++ ++ +++ A + L + H+ IIHR
Sbjct: 93 IVMEYVDGVTLRDIVHTE--------GP-MTPKRAIEVIADACQALNFSHQNG---IIHR 140
Query: 85 DIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTR-VLGTFGYHAPEYAMTGQLNAKS 143
D+K +N+LI + K+ DF ++ D + T V+GT Y +PE A ++A+S
Sbjct: 141 DVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARS 200
Query: 144 DVYSFGVVLLELLTGRKP 161
DVYS G VL E+LTG P
Sbjct: 201 DVYSLGCVLYEVLTGEPP 218
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 83/164 (50%), Gaps = 17/164 (10%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +LKH+ VQL V + E+ + GSL D L +G P V
Sbjct: 57 IMKKLKHDKLVQLYA-VVSEEPIYIVTEYMNKGSLLDFLKDGEGRALKLP-------NLV 108
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+A A G+ Y+ + IHRD++S+N+L+ + + KIADF L+ D +
Sbjct: 109 DMAAQVAAGMAYIERM---NYIHRDLRSANILVGNGLICKIADFGLARLIEDNEX---TA 162
Query: 121 RVLGTF--GYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
R F + APE A+ G+ KSDV+SFG++L EL+T GR P
Sbjct: 163 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVP 206
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 85/164 (51%), Gaps = 17/164 (10%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +L+H+ V+L ++ E+ NGSL D L G+K L+ + +
Sbjct: 61 LMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIK-------LTINKLL 112
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+A A+G+ ++ E+ + IHRD++++N+L+ D KIADF L+ D +
Sbjct: 113 DMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEX---TA 166
Query: 121 RVLGTF--GYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
R F + APE G KSDV+SFG++L E++T GR P
Sbjct: 167 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 210
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 85/164 (51%), Gaps = 17/164 (10%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +L+H+ V+L ++ E+ NGSL D L G+K L+ + +
Sbjct: 67 LMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIK-------LTINKLL 118
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+A A+G+ ++ E+ + IHRD++++N+L+ D KIADF L+ D +
Sbjct: 119 DMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX---TA 172
Query: 121 RVLGTF--GYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
R F + APE G KSDV+SFG++L E++T GR P
Sbjct: 173 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 216
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 85/164 (51%), Gaps = 17/164 (10%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +L+H+ V+L ++ E+ NGSL D L G+K L+ + +
Sbjct: 69 LMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIK-------LTINKLL 120
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+A A+G+ ++ E+ + IHRD++++N+L+ D KIADF L+ D +
Sbjct: 121 DMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX---TA 174
Query: 121 RVLGTF--GYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
R F + APE G KSDV+SFG++L E++T GR P
Sbjct: 175 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 218
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 85/164 (51%), Gaps = 17/164 (10%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +L+H+ V+L ++ E+ NGSL D L G+K L+ + +
Sbjct: 70 LMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIK-------LTINKLL 121
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+A A+G+ ++ E+ + IHRD++++N+L+ D KIADF L+ D +
Sbjct: 122 DMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX---TA 175
Query: 121 RVLGTF--GYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
R F + APE G KSDV+SFG++L E++T GR P
Sbjct: 176 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 219
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 85/164 (51%), Gaps = 17/164 (10%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +L+H+ V+L ++ E+ NGSL D L G+K L+ + +
Sbjct: 61 LMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIK-------LTINKLL 112
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+A A+G+ ++ E+ + IHRD++++N+L+ D KIADF L+ D +
Sbjct: 113 DMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX---TA 166
Query: 121 RVLGTF--GYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
R F + APE G KSDV+SFG++L E++T GR P
Sbjct: 167 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 210
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 85/164 (51%), Gaps = 17/164 (10%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +L+H+ V+L ++ E+ NGSL D L G+K L+ + +
Sbjct: 63 LMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIK-------LTINKLL 114
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+A A+G+ ++ E+ + IHRD++++N+L+ D KIADF L+ D +
Sbjct: 115 DMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX---TA 168
Query: 121 RVLGTF--GYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
R F + APE G KSDV+SFG++L E++T GR P
Sbjct: 169 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 212
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 73/138 (52%), Gaps = 13/138 (9%)
Query: 25 LAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHR 84
+ E+ +L DI+H GP ++ ++ +++ A + L + H+ IIHR
Sbjct: 93 IVMEYVDGVTLRDIVHTE--------GP-MTPKRAIEVIADACQALNFSHQNG---IIHR 140
Query: 85 DIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTR-VLGTFGYHAPEYAMTGQLNAKS 143
D+K +N++I + K+ DF ++ D + T V+GT Y +PE A ++A+S
Sbjct: 141 DVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARS 200
Query: 144 DVYSFGVVLLELLTGRKP 161
DVYS G VL E+LTG P
Sbjct: 201 DVYSLGCVLYEVLTGEPP 218
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 73/138 (52%), Gaps = 13/138 (9%)
Query: 25 LAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHR 84
+ E+ +L DI+H GP ++ ++ +++ A + L + H+ IIHR
Sbjct: 93 IVMEYVDGVTLRDIVHTE--------GP-MTPKRAIEVIADACQALNFSHQNG---IIHR 140
Query: 85 DIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTR-VLGTFGYHAPEYAMTGQLNAKS 143
D+K +N++I + K+ DF ++ D + T V+GT Y +PE A ++A+S
Sbjct: 141 DVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARS 200
Query: 144 DVYSFGVVLLELLTGRKP 161
DVYS G VL E+LTG P
Sbjct: 201 DVYSLGCVLYEVLTGEPP 218
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 73/138 (52%), Gaps = 13/138 (9%)
Query: 25 LAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHR 84
+ E+ +L DI+H GP ++ ++ +++ A + L + H+ IIHR
Sbjct: 93 IVMEYVDGVTLRDIVHTE--------GP-MTPKRAIEVIADACQALNFSHQNG---IIHR 140
Query: 85 DIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTR-VLGTFGYHAPEYAMTGQLNAKS 143
D+K +N++I + K+ DF ++ D + T V+GT Y +PE A ++A+S
Sbjct: 141 DVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARS 200
Query: 144 DVYSFGVVLLELLTGRKP 161
DVYS G VL E+LTG P
Sbjct: 201 DVYSLGCVLYEVLTGEPP 218
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 73/138 (52%), Gaps = 13/138 (9%)
Query: 25 LAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHR 84
+ E+ +L DI+H GP ++ ++ +++ A + L + H+ IIHR
Sbjct: 93 IVMEYVDGVTLRDIVHTE--------GP-MTPKRAIEVIADACQALNFSHQNG---IIHR 140
Query: 85 DIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTR-VLGTFGYHAPEYAMTGQLNAKS 143
D+K +N++I + K+ DF ++ D + T V+GT Y +PE A ++A+S
Sbjct: 141 DVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARS 200
Query: 144 DVYSFGVVLLELLTGRKP 161
DVYS G VL E+LTG P
Sbjct: 201 DVYSLGCVLYEVLTGEPP 218
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 84/165 (50%), Gaps = 13/165 (7%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +L H VQL G C++ L EF +G L D L ++G+ A+ +
Sbjct: 56 VMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAET--------LL 107
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+ + +G+ YL E +IHRD+ + N L+ ++ V K++DF ++ D ST
Sbjct: 108 GMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLD-DQYTSST 163
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKPVDH 164
+ +PE + ++KSDV+SFGV++ E+ + G+ P ++
Sbjct: 164 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN 208
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 99/236 (41%), Gaps = 30/236 (12%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ + H N V+L+G C + E G L +GA+ L + +
Sbjct: 165 ILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLR----TEGAR----LRVKTLL 216
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
++ AA G+EYL K IHRD+ + N L+ + +V KI+DF +S + D
Sbjct: 217 QMVGDAAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGG 273
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPK 180
+ APE G+ +++SDV+SFG++L E SL P
Sbjct: 274 LRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETF---------------SLGASPYPN 318
Query: 181 LSEDKVRQCVDARLGGDYPPXXXXXXXXXXXL--CVQYEADFRPNMSIVVKALQPL 234
LS + R+ V+ GG P + C YE RP+ S + + LQ +
Sbjct: 319 LSNQQTREFVEK--GGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSI 372
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 85/164 (51%), Gaps = 17/164 (10%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +L+H+ V+L ++ E+ NGSL D L G+K L+ + +
Sbjct: 62 LMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIK-------LTINKLL 113
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+A A+G+ ++ E+ + IHRD++++N+L+ D KIADF L+ D +
Sbjct: 114 DMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX---TA 167
Query: 121 RVLGTF--GYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
R F + APE G KSDV+SFG++L E++T GR P
Sbjct: 168 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 211
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 85/164 (51%), Gaps = 17/164 (10%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +L+H+ V+L ++ E+ NGSL D L G+K L+ + +
Sbjct: 61 LMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIK-------LTINKLL 112
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+A A+G+ ++ E+ + IHRD++++N+L+ D KIADF L+ D +
Sbjct: 113 DMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX---TA 166
Query: 121 RVLGTF--GYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
R F + APE G KSDV+SFG++L E++T GR P
Sbjct: 167 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 210
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 103/247 (41%), Gaps = 33/247 (13%)
Query: 1 MVSRLKHENFVQLLGYCVD--GTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQ 58
++ L HEN V+ G C + G L EF +GSL + L K ++ +Q
Sbjct: 76 ILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNK--------INLKQ 127
Query: 59 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSN--QAPDMAAR 116
++K AV KG++YL + +HRD+ + NVL+ + KI DF L+ +
Sbjct: 128 QLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXT 184
Query: 117 LHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT----GRKPVDHTL----PR 168
+ R F Y APE M + SDV+SFGV L ELLT P+ L P
Sbjct: 185 VKDDRDSPVFWY-APECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPT 243
Query: 169 GQQSLVTWATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXXLCVQYEADFRPNMSIVV 228
Q VT L E K C PP C +++ R + ++
Sbjct: 244 HGQMTVTRLVNTLKEGKRLPC---------PPNCPDEVYQLMRKCWEFQPSNRTSFQNLI 294
Query: 229 KALQPLL 235
+ + LL
Sbjct: 295 EGFEALL 301
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 103/247 (41%), Gaps = 33/247 (13%)
Query: 1 MVSRLKHENFVQLLGYCVD--GTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQ 58
++ L HEN V+ G C + G L EF +GSL + L K ++ +Q
Sbjct: 64 ILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNK--------INLKQ 115
Query: 59 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSN--QAPDMAAR 116
++K AV KG++YL + +HRD+ + NVL+ + KI DF L+ +
Sbjct: 116 QLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXT 172
Query: 117 LHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT----GRKPVDHTL----PR 168
+ R F Y APE M + SDV+SFGV L ELLT P+ L P
Sbjct: 173 VKDDRDSPVFWY-APECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPT 231
Query: 169 GQQSLVTWATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXXLCVQYEADFRPNMSIVV 228
Q VT L E K C PP C +++ R + ++
Sbjct: 232 HGQMTVTRLVNTLKEGKRLPC---------PPNCPDEVYQLMRKCWEFQPSNRTSFQNLI 282
Query: 229 KALQPLL 235
+ + LL
Sbjct: 283 EGFEALL 289
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 73/138 (52%), Gaps = 13/138 (9%)
Query: 25 LAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHR 84
+ E+ +L DI+H GP ++ ++ +++ A + L + H+ IIHR
Sbjct: 110 IVMEYVDGVTLRDIVHTE--------GP-MTPKRAIEVIADACQALNFSHQNG---IIHR 157
Query: 85 DIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTR-VLGTFGYHAPEYAMTGQLNAKS 143
D+K +N++I + K+ DF ++ D + T V+GT Y +PE A ++A+S
Sbjct: 158 DVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARS 217
Query: 144 DVYSFGVVLLELLTGRKP 161
DVYS G VL E+LTG P
Sbjct: 218 DVYSLGCVLYEVLTGEPP 235
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 99/236 (41%), Gaps = 30/236 (12%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ + H N V+L+G C + E G L +GA+ L + +
Sbjct: 165 ILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLR----TEGAR----LRVKTLL 216
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
++ AA G+EYL K IHRD+ + N L+ + +V KI+DF +S + D
Sbjct: 217 QMVGDAAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGG 273
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPK 180
+ APE G+ +++SDV+SFG++L E SL P
Sbjct: 274 LRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETF---------------SLGASPYPN 318
Query: 181 LSEDKVRQCVDARLGGDYPPXXXXXXXXXXXL--CVQYEADFRPNMSIVVKALQPL 234
LS + R+ V+ GG P + C YE RP+ S + + LQ +
Sbjct: 319 LSNQQTREFVEK--GGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSI 372
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 114/248 (45%), Gaps = 38/248 (15%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ + +H N + +GY ++ ++ SL+ LH + + +
Sbjct: 57 VLRKTRHVNILLFMGYSTKPQLAIVT-QWCEGSSLYHHLHIIE--------TKFEMIKLI 107
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
IA A+G++YLH K+ IIHRD+KS+N+ + +D KI DF L+ +
Sbjct: 108 DIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE 164
Query: 121 RVLGTFGYHAPEYAMTGQLNA---KSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVT-- 175
++ G+ + APE N +SDVY+FG+VL EL+TG+ P + R Q +
Sbjct: 165 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGR 224
Query: 176 -WATPKLSEDKVR-QCVDA--RLGGDYPPXXXXXXXXXXXLCVQYEADFRPNMSIVVKAL 231
+ +P LS KVR C A RL + C++ + D RP ++ ++
Sbjct: 225 GYLSPDLS--KVRSNCPKAMKRLMAE---------------CLKKKRDERPLFPQILASI 267
Query: 232 QPLLNARP 239
+ L + P
Sbjct: 268 ELLARSLP 275
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 93/189 (49%), Gaps = 29/189 (15%)
Query: 60 VKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHS 119
+ IA A+G++YLH K+ IIHRD+KS+N+ + +D KI DF L+ +
Sbjct: 112 IDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF 168
Query: 120 TRVLGTFGYHAPEYAMTGQLNA---KSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVT- 175
++ G+ + APE N +SDVY+FG+VL EL+TG+ P + R Q +
Sbjct: 169 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVG 228
Query: 176 --WATPKLSEDKVR-QCVDA--RLGGDYPPXXXXXXXXXXXLCVQYEADFRPNMSIVVKA 230
+ +P LS KVR C A RL + C++ + D RP ++ +
Sbjct: 229 RGYLSPDLS--KVRSNCPKAMKRLMAE---------------CLKKKRDERPLFPQILAS 271
Query: 231 LQPLLNARP 239
++ L + P
Sbjct: 272 IELLARSLP 280
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 114/248 (45%), Gaps = 38/248 (15%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ + +H N + +GY ++ ++ SL+ LH + + +
Sbjct: 62 VLRKTRHVNILLFMGYSTKPQLAIVT-QWCEGSSLYHHLHIIE--------TKFEMIKLI 112
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
IA A+G++YLH K+ IIHRD+KS+N+ + +D KI DF L+ +
Sbjct: 113 DIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE 169
Query: 121 RVLGTFGYHAPEYAMTGQLNA---KSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVT-- 175
++ G+ + APE N +SDVY+FG+VL EL+TG+ P + R Q +
Sbjct: 170 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGR 229
Query: 176 -WATPKLSEDKVR-QCVDA--RLGGDYPPXXXXXXXXXXXLCVQYEADFRPNMSIVVKAL 231
+ +P LS KVR C A RL + C++ + D RP ++ ++
Sbjct: 230 GYLSPDLS--KVRSNCPKAMKRLMAE---------------CLKKKRDERPLFPQILASI 272
Query: 232 QPLLNARP 239
+ L + P
Sbjct: 273 ELLARSLP 280
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 93/189 (49%), Gaps = 29/189 (15%)
Query: 60 VKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHS 119
+ IA A+G++YLH K+ IIHRD+KS+N+ + +D KI DF L+ +
Sbjct: 134 IDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF 190
Query: 120 TRVLGTFGYHAPEYAMTGQLNA---KSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVT- 175
++ G+ + APE N +SDVY+FG+VL EL+TG+ P + R Q +
Sbjct: 191 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVG 250
Query: 176 --WATPKLSEDKVR-QCVDA--RLGGDYPPXXXXXXXXXXXLCVQYEADFRPNMSIVVKA 230
+ +P LS KVR C A RL + C++ + D RP ++ +
Sbjct: 251 RGYLSPDLS--KVRSNCPKAMKRLMAE---------------CLKKKRDERPLFPQILAS 293
Query: 231 LQPLLNARP 239
++ L + P
Sbjct: 294 IELLARSLP 302
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 86/164 (52%), Gaps = 17/164 (10%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +L+H+ V+L ++ E+ NGSL D L G+K L+ + +
Sbjct: 57 LMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIK-------LTINKLL 108
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+A A+G+ ++ E+ + IHR+++++N+L+ D KIADF L+ D ++
Sbjct: 109 DMAAQIAEGMAFIEER---NYIHRNLRAANILVSDTLSCKIADFGLARLIEDNE---YTA 162
Query: 121 RVLGTF--GYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
R F + APE G KSDV+SFG++L E++T GR P
Sbjct: 163 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 206
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 93/189 (49%), Gaps = 29/189 (15%)
Query: 60 VKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHS 119
+ IA A+G++YLH K+ IIHRD+KS+N+ + +D KI DF L+ +
Sbjct: 135 IDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF 191
Query: 120 TRVLGTFGYHAPEYAMTGQLNA---KSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVT- 175
++ G+ + APE N +SDVY+FG+VL EL+TG+ P + R Q +
Sbjct: 192 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVG 251
Query: 176 --WATPKLSEDKVR-QCVDA--RLGGDYPPXXXXXXXXXXXLCVQYEADFRPNMSIVVKA 230
+ +P LS KVR C A RL + C++ + D RP ++ +
Sbjct: 252 RGYLSPDLS--KVRSNCPKAMKRLMAE---------------CLKKKRDERPLFPQILAS 294
Query: 231 LQPLLNARP 239
++ L + P
Sbjct: 295 IELLARSLP 303
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 93/189 (49%), Gaps = 29/189 (15%)
Query: 60 VKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHS 119
+ IA A+G++YLH K+ IIHRD+KS+N+ + +D KI DF L+ +
Sbjct: 109 IDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF 165
Query: 120 TRVLGTFGYHAPEYAMTGQLNA---KSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVT- 175
++ G+ + APE N +SDVY+FG+VL EL+TG+ P + R Q +
Sbjct: 166 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVG 225
Query: 176 --WATPKLSEDKVR-QCVDA--RLGGDYPPXXXXXXXXXXXLCVQYEADFRPNMSIVVKA 230
+ +P LS KVR C A RL + C++ + D RP ++ +
Sbjct: 226 RGYLSPDLS--KVRSNCPKAMKRLMAE---------------CLKKKRDERPLFPQILAS 268
Query: 231 LQPLLNARP 239
++ L + P
Sbjct: 269 IELLARSLP 277
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 113/248 (45%), Gaps = 38/248 (15%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ + +H N + +GY + ++ SL+ LH + + +
Sbjct: 57 VLRKTRHVNILLFMGYST-APQLAIVTQWCEGSSLYHHLHIIE--------TKFEMIKLI 107
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
IA A+G++YLH K+ IIHRD+KS+N+ + +D KI DF L+ +
Sbjct: 108 DIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE 164
Query: 121 RVLGTFGYHAPEYAMTGQLNA---KSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVT-- 175
++ G+ + APE N +SDVY+FG+VL EL+TG+ P + R Q +
Sbjct: 165 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGR 224
Query: 176 -WATPKLSEDKVR-QCVDA--RLGGDYPPXXXXXXXXXXXLCVQYEADFRPNMSIVVKAL 231
+ +P LS KVR C A RL + C++ + D RP ++ ++
Sbjct: 225 GYLSPDLS--KVRSNCPKAMKRLMAE---------------CLKKKRDERPLFPQILASI 267
Query: 232 QPLLNARP 239
+ L + P
Sbjct: 268 ELLARSLP 275
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 100/235 (42%), Gaps = 23/235 (9%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++S+L H+N V+ +G + R + E + G L L + + +QP L+ +
Sbjct: 87 IISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRP-RPSQPS-SLAMLDLL 144
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIF---DDDVAKIADFDLSNQAPDMAARL 117
+A A G +YL E H IHRDI + N L+ VAKI DF ++ +
Sbjct: 145 HVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 201
Query: 118 HSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWA 177
+ + PE M G +K+D +SFGV+L E+ SL
Sbjct: 202 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF---------------SLGYMP 246
Query: 178 TPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXXLCVQYEADFRPNMSIVVKALQ 232
P S +V + V + D P C Q++ + RPN +I+++ ++
Sbjct: 247 YPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 301
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 100/235 (42%), Gaps = 23/235 (9%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++S+L H+N V+ +G + R + E + G L L + + +QP L+ +
Sbjct: 101 IISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRP-RPSQPS-SLAMLDLL 158
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIF---DDDVAKIADFDLSNQAPDMAARL 117
+A A G +YL E H IHRDI + N L+ VAKI DF ++ +
Sbjct: 159 HVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 215
Query: 118 HSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWA 177
+ + PE M G +K+D +SFGV+L E+ SL
Sbjct: 216 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF---------------SLGYMP 260
Query: 178 TPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXXLCVQYEADFRPNMSIVVKALQ 232
P S +V + V + D P C Q++ + RPN +I+++ ++
Sbjct: 261 YPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 315
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 73.6 bits (179), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 86/164 (52%), Gaps = 17/164 (10%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ L+H+ V+L ++ EF + GSL D L +G K QP P L +
Sbjct: 63 VMKTLQHDKLVKLHAVVTKEPIYIIT-EFMAKGSLLDFLKSDEGSK--QPLPKL-----I 114
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+ A+G+ ++ ++ + IHRD++++N+L+ V KIADF L+ D ++
Sbjct: 115 DFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNE---YTA 168
Query: 121 RVLGTF--GYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
R F + APE G KSDV+SFG++L+E++T GR P
Sbjct: 169 REGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIP 212
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 86/164 (52%), Gaps = 17/164 (10%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ L+H+ V+L ++ EF + GSL D L +G K QP P L +
Sbjct: 236 VMKTLQHDKLVKLHAVVTKEPIYIIT-EFMAKGSLLDFLKSDEGSK--QPLPKL-----I 287
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+ A+G+ ++ ++ + IHRD++++N+L+ V KIADF L+ D ++
Sbjct: 288 DFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNE---YTA 341
Query: 121 RVLGTF--GYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
R F + APE G KSDV+SFG++L+E++T GR P
Sbjct: 342 REGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIP 385
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 99/235 (42%), Gaps = 23/235 (9%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++S+ H+N V+ +G + R + E + G L L + + +QP L+ +
Sbjct: 87 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRP-RPSQPS-SLAMLDLL 144
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIF---DDDVAKIADFDLSNQAPDMAARL 117
+A A G +YL E H IHRDI + N L+ VAKI DF ++ +
Sbjct: 145 HVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYR 201
Query: 118 HSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWA 177
+ + PE M G +K+D +SFGV+L E+ SL
Sbjct: 202 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF---------------SLGYMP 246
Query: 178 TPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXXLCVQYEADFRPNMSIVVKALQ 232
P S +V + V + D P C Q++ + RPN +I+++ ++
Sbjct: 247 YPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 301
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 99/235 (42%), Gaps = 23/235 (9%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++S+ H+N V+ +G + R + E + G L L + + +QP L+ +
Sbjct: 86 IISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRP-RPSQPS-SLAMLDLL 143
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIF---DDDVAKIADFDLSNQAPDMAARL 117
+A A G +YL E H IHRDI + N L+ VAKI DF ++ +
Sbjct: 144 HVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 200
Query: 118 HSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWA 177
+ + PE M G +K+D +SFGV+L E+ SL
Sbjct: 201 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF---------------SLGYMP 245
Query: 178 TPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXXLCVQYEADFRPNMSIVVKALQ 232
P S +V + V + D P C Q++ + RPN +I+++ ++
Sbjct: 246 YPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 300
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 99/235 (42%), Gaps = 23/235 (9%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++S+ H+N V+ +G + R + E + G L L + + +QP L+ +
Sbjct: 78 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRP-RPSQPS-SLAMLDLL 135
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIF---DDDVAKIADFDLSNQAPDMAARL 117
+A A G +YL E H IHRDI + N L+ VAKI DF ++ +
Sbjct: 136 HVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 192
Query: 118 HSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWA 177
+ + PE M G +K+D +SFGV+L E+ SL
Sbjct: 193 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF---------------SLGYMP 237
Query: 178 TPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXXLCVQYEADFRPNMSIVVKALQ 232
P S +V + V + D P C Q++ + RPN +I+++ ++
Sbjct: 238 YPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 292
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 99/235 (42%), Gaps = 23/235 (9%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++S+ H+N V+ +G + R + E + G L L + + +QP L+ +
Sbjct: 101 IISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRP-RPSQPS-SLAMLDLL 158
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIF---DDDVAKIADFDLSNQAPDMAARL 117
+A A G +YL E H IHRDI + N L+ VAKI DF ++ +
Sbjct: 159 HVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 215
Query: 118 HSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWA 177
+ + PE M G +K+D +SFGV+L E+ SL
Sbjct: 216 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF---------------SLGYMP 260
Query: 178 TPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXXLCVQYEADFRPNMSIVVKALQ 232
P S +V + V + D P C Q++ + RPN +I+++ ++
Sbjct: 261 YPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 315
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 99/235 (42%), Gaps = 23/235 (9%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++S+ H+N V+ +G + R + E + G L L + + +QP L+ +
Sbjct: 87 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRP-RPSQPS-SLAMLDLL 144
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIF---DDDVAKIADFDLSNQAPDMAARL 117
+A A G +YL E H IHRDI + N L+ VAKI DF ++ +
Sbjct: 145 HVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 201
Query: 118 HSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWA 177
+ + PE M G +K+D +SFGV+L E+ SL
Sbjct: 202 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF---------------SLGYMP 246
Query: 178 TPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXXLCVQYEADFRPNMSIVVKALQ 232
P S +V + V + D P C Q++ + RPN +I+++ ++
Sbjct: 247 YPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 301
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 99/235 (42%), Gaps = 23/235 (9%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++S+ H+N V+ +G + R + E + G L L + + +QP L+ +
Sbjct: 86 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRP-RPSQPS-SLAMLDLL 143
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIF---DDDVAKIADFDLSNQAPDMAARL 117
+A A G +YL E H IHRDI + N L+ VAKI DF ++ +
Sbjct: 144 HVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 200
Query: 118 HSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWA 177
+ + PE M G +K+D +SFGV+L E+ SL
Sbjct: 201 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF---------------SLGYMP 245
Query: 178 TPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXXLCVQYEADFRPNMSIVVKALQ 232
P S +V + V + D P C Q++ + RPN +I+++ ++
Sbjct: 246 YPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 300
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 99/235 (42%), Gaps = 23/235 (9%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++S+ H+N V+ +G + R + E + G L L + + +QP L+ +
Sbjct: 101 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRP-RPSQPS-SLAMLDLL 158
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIF---DDDVAKIADFDLSNQAPDMAARL 117
+A A G +YL E H IHRDI + N L+ VAKI DF ++ +
Sbjct: 159 HVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 215
Query: 118 HSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWA 177
+ + PE M G +K+D +SFGV+L E+ SL
Sbjct: 216 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF---------------SLGYMP 260
Query: 178 TPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXXLCVQYEADFRPNMSIVVKALQ 232
P S +V + V + D P C Q++ + RPN +I+++ ++
Sbjct: 261 YPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 315
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 99/235 (42%), Gaps = 23/235 (9%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++S+ H+N V+ +G + R + E + G L L + + +QP L+ +
Sbjct: 93 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRP-RPSQPS-SLAMLDLL 150
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIF---DDDVAKIADFDLSNQAPDMAARL 117
+A A G +YL E H IHRDI + N L+ VAKI DF ++ +
Sbjct: 151 HVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 207
Query: 118 HSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWA 177
+ + PE M G +K+D +SFGV+L E+ SL
Sbjct: 208 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF---------------SLGYMP 252
Query: 178 TPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXXLCVQYEADFRPNMSIVVKALQ 232
P S +V + V + D P C Q++ + RPN +I+++ ++
Sbjct: 253 YPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 307
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 99/235 (42%), Gaps = 23/235 (9%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++S+ H+N V+ +G + R + E + G L L + + +QP L+ +
Sbjct: 103 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRP-RPSQPS-SLAMLDLL 160
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIF---DDDVAKIADFDLSNQAPDMAARL 117
+A A G +YL E H IHRDI + N L+ VAKI DF ++ +
Sbjct: 161 HVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 217
Query: 118 HSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWA 177
+ + PE M G +K+D +SFGV+L E+ SL
Sbjct: 218 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF---------------SLGYMP 262
Query: 178 TPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXXLCVQYEADFRPNMSIVVKALQ 232
P S +V + V + D P C Q++ + RPN +I+++ ++
Sbjct: 263 YPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 317
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 99/235 (42%), Gaps = 23/235 (9%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++S+ H+N V+ +G + R + E + G L L + + +QP L+ +
Sbjct: 113 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRP-RPSQPS-SLAMLDLL 170
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIF---DDDVAKIADFDLSNQAPDMAARL 117
+A A G +YL E H IHRDI + N L+ VAKI DF ++ +
Sbjct: 171 HVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 227
Query: 118 HSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWA 177
+ + PE M G +K+D +SFGV+L E+ SL
Sbjct: 228 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF---------------SLGYMP 272
Query: 178 TPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXXLCVQYEADFRPNMSIVVKALQ 232
P S +V + V + D P C Q++ + RPN +I+++ ++
Sbjct: 273 YPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 327
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 78/163 (47%), Gaps = 23/163 (14%)
Query: 7 HENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVK-------GAQPGPVLSWQQR 59
H N + LLG C LA E+A +G+L D L + ++ LS QQ
Sbjct: 85 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 144
Query: 60 VKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHS 119
+ A A+G++YL +K IHRD+ + N+L+ ++ VAKIADF LS R
Sbjct: 145 LHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLS--------RGQE 193
Query: 120 TRVLGTFGYHAPEYAMTGQLN-----AKSDVYSFGVVLLELLT 157
V T G + LN SDV+S+GV+L E+++
Sbjct: 194 VYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 85/174 (48%), Gaps = 25/174 (14%)
Query: 3 SRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGR------------KGVKGAQP 50
+RL+H N V LLG + + + S+G LH+ L R + VK A
Sbjct: 84 ARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALE 143
Query: 51 GPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQ- 109
P V + A G+EYL + H++H+D+ + NVL++D KI+D L +
Sbjct: 144 PPDF-----VHLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREV 195
Query: 110 -APDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
A D L ++ L + APE M G+ + SD++S+GVVL E+ + G +P
Sbjct: 196 YAADYYKLLGNS--LLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQP 247
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 78/163 (47%), Gaps = 23/163 (14%)
Query: 7 HENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVK-------GAQPGPVLSWQQR 59
H N + LLG C LA E+A +G+L D L + ++ LS QQ
Sbjct: 75 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 134
Query: 60 VKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHS 119
+ A A+G++YL +K IHRD+ + N+L+ ++ VAKIADF LS R
Sbjct: 135 LHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLS--------RGQE 183
Query: 120 TRVLGTFGYHAPEYAMTGQLN-----AKSDVYSFGVVLLELLT 157
V T G + LN SDV+S+GV+L E+++
Sbjct: 184 VYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 98/235 (41%), Gaps = 23/235 (9%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++S+ H+N V+ +G + R + E + G L L + + +QP L+ +
Sbjct: 104 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRP-RPSQPS-SLAMLDLL 161
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIF---DDDVAKIADFDLSNQAPDMAARL 117
+A A G +YL E H IHRDI + N L+ VAKI DF ++
Sbjct: 162 HVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYR 218
Query: 118 HSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWA 177
+ + PE M G +K+D +SFGV+L E+ SL
Sbjct: 219 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF---------------SLGYMP 263
Query: 178 TPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXXLCVQYEADFRPNMSIVVKALQ 232
P S +V + V + D P C Q++ + RPN +I+++ ++
Sbjct: 264 YPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 318
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 80/165 (48%), Gaps = 15/165 (9%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ + H N + L G T ++ EF NGSL L G + Q V
Sbjct: 87 IMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQ--------FTVIQLV 138
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+ G A G++YL AD + +HRD+ + N+L+ + V K++DF LS D + T
Sbjct: 139 GMLRGIAAGMKYL---ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYT 195
Query: 121 RVLG---TFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
LG + APE + + SDV+S+G+V+ E+++ G +P
Sbjct: 196 SALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 240
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 98/235 (41%), Gaps = 23/235 (9%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++S+ H+N V+ +G + R + E + G L L + + +QP L+ +
Sbjct: 127 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRP-RPSQPS-SLAMLDLL 184
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIF---DDDVAKIADFDLSNQAPDMAARL 117
+A A G +YL E H IHRDI + N L+ VAKI DF ++
Sbjct: 185 HVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYR 241
Query: 118 HSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWA 177
+ + PE M G +K+D +SFGV+L E+ SL
Sbjct: 242 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF---------------SLGYMP 286
Query: 178 TPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXXLCVQYEADFRPNMSIVVKALQ 232
P S +V + V + D P C Q++ + RPN +I+++ ++
Sbjct: 287 YPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 341
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 85/174 (48%), Gaps = 25/174 (14%)
Query: 3 SRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGR------------KGVKGAQP 50
+RL+H N V LLG + + + S+G LH+ L R + VK A
Sbjct: 67 ARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALE 126
Query: 51 GPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQ- 109
P V + A G+EYL + H++H+D+ + NVL++D KI+D L +
Sbjct: 127 PPDF-----VHLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREV 178
Query: 110 -APDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
A D L ++ L + APE M G+ + SD++S+GVVL E+ + G +P
Sbjct: 179 YAADYYKLLGNS--LLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQP 230
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 69/161 (42%), Gaps = 16/161 (9%)
Query: 3 SRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKI 62
S L+H N ++L GY D T L E+A G ++ K Q Q+
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYLILEYAPRGEVY---------KELQKLSKFDEQRTATY 118
Query: 63 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRV 122
A L Y H K +IHRDIK N+L+ KIADF S AP T +
Sbjct: 119 ITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTL 171
Query: 123 LGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVD 163
GT Y PE + K D++S GV+ E L G+ P +
Sbjct: 172 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 80/159 (50%), Gaps = 15/159 (9%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +KH N VQLLG C + EF + G+L D L R+ + VL +
Sbjct: 62 VMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL--RECNRQEVSAVVL-----L 114
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+A + +EYL +K + IHRD+ + N L+ ++ + K+ADF LS M ++
Sbjct: 115 YMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTYTA 168
Query: 121 RVLGTF--GYHAPEYAMTGQLNAKSDVYSFGVVLLELLT 157
F + APE + + KSDV++FGV+L E+ T
Sbjct: 169 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 80/159 (50%), Gaps = 15/159 (9%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +KH N VQLLG C + EF + G+L D L R+ + VL +
Sbjct: 67 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVL-----L 119
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+A + +EYL +K + IHRD+ + N L+ ++ + K+ADF LS M ++
Sbjct: 120 YMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTYTA 173
Query: 121 RVLGTF--GYHAPEYAMTGQLNAKSDVYSFGVVLLELLT 157
F + APE + + KSDV++FGV+L E+ T
Sbjct: 174 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 104/246 (42%), Gaps = 19/246 (7%)
Query: 1 MVSRLKHENFVQLLGYCVDG--TSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQ 58
++ L HE+ ++ G C D S L E+ GSL D L P + Q
Sbjct: 86 ILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYL----------PRHSIGLAQ 135
Query: 59 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLH 118
+ A +G+ YLH + H IHRD+ + NVL+ +D + KI DF L+ P+ +
Sbjct: 136 LLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPE-GHEXY 191
Query: 119 STRVLGT--FGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTW 176
R G ++APE + SDV+SFGV L ELLT + P L+
Sbjct: 192 RVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT-HCDSSQSPPTKFLELIGI 250
Query: 177 ATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXXLCVQYEADFRPNMSIVVKALQPLLN 236
A +++ ++ + ++ P C + EA FRP ++ L+ +
Sbjct: 251 AQGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHE 310
Query: 237 ARPGPA 242
G A
Sbjct: 311 KYQGQA 316
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 80/159 (50%), Gaps = 15/159 (9%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +KH N VQLLG C + EF + G+L D L R+ + VL +
Sbjct: 62 VMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL--RECNRQEVSAVVL-----L 114
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+A + +EYL +K + IHRD+ + N L+ ++ + K+ADF LS M ++
Sbjct: 115 YMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTYTA 168
Query: 121 RVLGTF--GYHAPEYAMTGQLNAKSDVYSFGVVLLELLT 157
F + APE + + KSDV++FGV+L E+ T
Sbjct: 169 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 80/159 (50%), Gaps = 15/159 (9%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +KH N VQLLG C + EF + G+L D L R+ + VL +
Sbjct: 67 VMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL--RECNRQEVNAVVL-----L 119
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+A + +EYL +K + IHRD+ + N L+ ++ + K+ADF LS M ++
Sbjct: 120 YMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTYTA 173
Query: 121 RVLGTF--GYHAPEYAMTGQLNAKSDVYSFGVVLLELLT 157
F + APE + + KSDV++FGV+L E+ T
Sbjct: 174 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 80/159 (50%), Gaps = 15/159 (9%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +KH N VQLLG C + EF + G+L D L R+ + VL +
Sbjct: 62 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVL-----L 114
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+A + +EYL +K + IHRD+ + N L+ ++ + K+ADF LS M ++
Sbjct: 115 YMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTYTA 168
Query: 121 RVLGTF--GYHAPEYAMTGQLNAKSDVYSFGVVLLELLT 157
F + APE + + KSDV++FGV+L E+ T
Sbjct: 169 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 78/157 (49%), Gaps = 11/157 (7%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +KH N VQLLG C + EF + G+L D L R+ + VL +
Sbjct: 60 VMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL--RECNRQEVSAVVL-----L 112
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+A + +EYL +K + IHRD+ + N L+ ++ + K+ADF LS H+
Sbjct: 113 YMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAG 169
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT 157
+ APE + + KSDV++FGV+L E+ T
Sbjct: 170 AKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 80/159 (50%), Gaps = 15/159 (9%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +KH N VQLLG C + EF + G+L D L R+ + VL +
Sbjct: 62 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVL-----L 114
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+A + +EYL +K + IHRD+ + N L+ ++ + K+ADF LS M ++
Sbjct: 115 YMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTYTA 168
Query: 121 RVLGTF--GYHAPEYAMTGQLNAKSDVYSFGVVLLELLT 157
F + APE + + KSDV++FGV+L E+ T
Sbjct: 169 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 80/159 (50%), Gaps = 15/159 (9%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +KH N VQLLG C + EF + G+L D L R+ + VL +
Sbjct: 66 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVL-----L 118
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+A + +EYL +K + IHRD+ + N L+ ++ + K+ADF LS M ++
Sbjct: 119 YMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTYTA 172
Query: 121 RVLGTF--GYHAPEYAMTGQLNAKSDVYSFGVVLLELLT 157
F + APE + + KSDV++FGV+L E+ T
Sbjct: 173 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 211
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 80/159 (50%), Gaps = 15/159 (9%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +KH N VQLLG C + EF + G+L D L R+ + VL +
Sbjct: 67 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVL-----L 119
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+A + +EYL +K + IHRD+ + N L+ ++ + K+ADF LS M ++
Sbjct: 120 YMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTYTA 173
Query: 121 RVLGTF--GYHAPEYAMTGQLNAKSDVYSFGVVLLELLT 157
F + APE + + KSDV++FGV+L E+ T
Sbjct: 174 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 80/159 (50%), Gaps = 15/159 (9%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +KH N VQLLG C + EF + G+L D L R+ + VL +
Sbjct: 62 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVL-----L 114
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+A + +EYL +K + IHRD+ + N L+ ++ + K+ADF LS M ++
Sbjct: 115 YMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTYTA 168
Query: 121 RVLGTF--GYHAPEYAMTGQLNAKSDVYSFGVVLLELLT 157
F + APE + + KSDV++FGV+L E+ T
Sbjct: 169 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 86/190 (45%), Gaps = 23/190 (12%)
Query: 11 VQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGL 70
V+ G T + E+ GS+ DI+ R L+ + I KGL
Sbjct: 87 VKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLR--------NKTLTEDEIATILQSTLKGL 138
Query: 71 EYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHA 130
EYLH IHRDIK+ N+L+ + AK+ADF ++ Q D A+ + V+GT + A
Sbjct: 139 EYLHFMRK---IHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNX--VIGTPFWMA 193
Query: 131 PEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLV------TWATPKLSED 184
PE N +D++S G+ +E+ G+ P P ++ T+ P+L D
Sbjct: 194 PEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSD 253
Query: 185 K----VRQCV 190
V+QC+
Sbjct: 254 NFTDFVKQCL 263
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 80/159 (50%), Gaps = 15/159 (9%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +KH N VQLLG C + EF + G+L D L R+ + VL +
Sbjct: 67 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVL-----L 119
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+A + +EYL +K + IHRD+ + N L+ ++ + K+ADF LS M ++
Sbjct: 120 YMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTYTA 173
Query: 121 RVLGTF--GYHAPEYAMTGQLNAKSDVYSFGVVLLELLT 157
F + APE + + KSDV++FGV+L E+ T
Sbjct: 174 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 70/161 (43%), Gaps = 16/161 (9%)
Query: 3 SRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKI 62
S L+H N ++L GY D T L E+A G+++ L Q Q+
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---------QKLSKFDEQRTATY 113
Query: 63 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRV 122
A L Y H K +IHRDIK N+L+ KIADF S AP T +
Sbjct: 114 ITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTEL 166
Query: 123 LGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVD 163
GT Y PE + K D++S GV+ E L G+ P +
Sbjct: 167 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 80/159 (50%), Gaps = 15/159 (9%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +KH N VQLLG C + EF + G+L D L R+ + VL +
Sbjct: 64 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVL-----L 116
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+A + +EYL +K + IHRD+ + N L+ ++ + K+ADF LS M ++
Sbjct: 117 YMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTYTA 170
Query: 121 RVLGTF--GYHAPEYAMTGQLNAKSDVYSFGVVLLELLT 157
F + APE + + KSDV++FGV+L E+ T
Sbjct: 171 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 78/157 (49%), Gaps = 11/157 (7%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +KH N VQLLG C + EF + G+L D L R+ + VL +
Sbjct: 60 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVL-----L 112
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+A + +EYL +K + IHRD+ + N L+ ++ + K+ADF LS H+
Sbjct: 113 YMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAG 169
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT 157
+ APE + + KSDV++FGV+L E+ T
Sbjct: 170 AKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 84/164 (51%), Gaps = 27/164 (16%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ L+H+ V+L ++ EF + GSL D L +G K QP P L +
Sbjct: 230 VMKTLQHDKLVKLHAVVTKEPIYIIT-EFMAKGSLLDFLKSDEGSK--QPLPKL-----I 281
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+ A+G+ ++ ++ + IHRD++++N+L+ V KIADF L+
Sbjct: 282 DFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLA------------- 325
Query: 121 RVLGTF--GYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
RV F + APE G KSDV+SFG++L+E++T GR P
Sbjct: 326 RVGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIP 369
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 80/159 (50%), Gaps = 15/159 (9%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +KH N VQLLG C + EF + G+L D L R+ + VL +
Sbjct: 62 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVL-----L 114
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+A + +EYL +K + IHRD+ + N L+ ++ + K+ADF LS M ++
Sbjct: 115 YMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTYTA 168
Query: 121 RVLGTF--GYHAPEYAMTGQLNAKSDVYSFGVVLLELLT 157
F + APE + + KSDV++FGV+L E+ T
Sbjct: 169 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 78/157 (49%), Gaps = 11/157 (7%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +KH N VQLLG C + EF + G+L D L R+ + VL +
Sbjct: 63 VMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL--RECNRQEVNAVVL-----L 115
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+A + +EYL +K + IHRD+ + N L+ ++ + K+ADF LS H+
Sbjct: 116 YMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAG 172
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT 157
+ APE + + KSDV++FGV+L E+ T
Sbjct: 173 AKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 208
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 70/161 (43%), Gaps = 16/161 (9%)
Query: 3 SRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKI 62
S L+H N ++L GY D T L E+A G+++ L Q Q+
Sbjct: 89 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---------QKLSKFDEQRTATY 139
Query: 63 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRV 122
A L Y H K +IHRDIK N+L+ KIADF S AP T +
Sbjct: 140 ITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTL 192
Query: 123 LGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVD 163
GT Y PE + K D++S GV+ E L G+ P +
Sbjct: 193 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 233
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 80/159 (50%), Gaps = 15/159 (9%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +KH N VQLLG C + EF + G+L D L R+ + VL +
Sbjct: 64 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVL-----L 116
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+A + +EYL +K + IHRD+ + N L+ ++ + K+ADF LS M ++
Sbjct: 117 YMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTYTA 170
Query: 121 RVLGTF--GYHAPEYAMTGQLNAKSDVYSFGVVLLELLT 157
F + APE + + KSDV++FGV+L E+ T
Sbjct: 171 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 78/157 (49%), Gaps = 11/157 (7%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +KH N VQLLG C + EF + G+L D L R+ + VL +
Sbjct: 67 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVL-----L 119
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+A + +EYL +K + IHRD+ + N L+ ++ + K+ADF LS H+
Sbjct: 120 YMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAG 176
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT 157
+ APE + + KSDV++FGV+L E+ T
Sbjct: 177 AKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 80/159 (50%), Gaps = 15/159 (9%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +KH N VQLLG C + EF + G+L D L R+ + VL +
Sbjct: 75 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVL-----L 127
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+A + +EYL +K + IHRD+ + N L+ ++ + K+ADF LS M ++
Sbjct: 128 YMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTYTA 181
Query: 121 RVLGTF--GYHAPEYAMTGQLNAKSDVYSFGVVLLELLT 157
F + APE + + KSDV++FGV+L E+ T
Sbjct: 182 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 220
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 70/161 (43%), Gaps = 16/161 (9%)
Query: 3 SRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKI 62
S L+H N ++L GY D T L E+A G+++ L Q Q+
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---------QKLSKFDEQRTATY 113
Query: 63 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRV 122
A L Y H K +IHRDIK N+L+ KIADF S AP T +
Sbjct: 114 ITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTL 166
Query: 123 LGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVD 163
GT Y PE + K D++S GV+ E L G+ P +
Sbjct: 167 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 70/161 (43%), Gaps = 16/161 (9%)
Query: 3 SRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKI 62
S L+H N ++L GY D T L E+A G+++ L Q Q+
Sbjct: 67 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---------QKLSKFDEQRTATY 117
Query: 63 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRV 122
A L Y H K +IHRDIK N+L+ KIADF S AP T +
Sbjct: 118 ITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTL 170
Query: 123 LGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVD 163
GT Y PE + K D++S GV+ E L G+ P +
Sbjct: 171 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 211
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 69/163 (42%), Gaps = 20/163 (12%)
Query: 3 SRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDIL--HGRKGVKGAQPGPVLSWQQRV 60
S L+H N +++ Y D L EFA G L+ L HGR Q+
Sbjct: 70 SHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR-----------FDEQRSA 118
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
A L Y HE+ +IHRDIK N+L+ KIADF S AP + R
Sbjct: 119 TFMEELADALHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRX--- 172
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVD 163
+ GT Y PE + K D++ GV+ E L G P D
Sbjct: 173 -MCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 214
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 69/163 (42%), Gaps = 20/163 (12%)
Query: 3 SRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDIL--HGRKGVKGAQPGPVLSWQQRV 60
S L+H N +++ Y D L EFA G L+ L HGR Q+
Sbjct: 69 SHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR-----------FDEQRSA 117
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
A L Y HE+ +IHRDIK N+L+ KIADF S AP + R
Sbjct: 118 TFMEELADALHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRX--- 171
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVD 163
+ GT Y PE + K D++ GV+ E L G P D
Sbjct: 172 -MCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 69/163 (42%), Gaps = 20/163 (12%)
Query: 3 SRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDIL--HGRKGVKGAQPGPVLSWQQRV 60
S L+H N +++ Y D L EFA G L+ L HGR Q+
Sbjct: 69 SHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR-----------FDEQRSA 117
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
A L Y HE+ +IHRDIK N+L+ KIADF S AP + R
Sbjct: 118 TFMEELADALHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRX--- 171
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVD 163
+ GT Y PE + K D++ GV+ E L G P D
Sbjct: 172 -MCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 70.5 bits (171), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 78/157 (49%), Gaps = 11/157 (7%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +KH N VQLLG C + EF + G+L D L R+ + VL +
Sbjct: 60 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVL-----L 112
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+A + +EYL +K + IHRD+ + N L+ ++ + K+ADF LS H+
Sbjct: 113 YMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAG 169
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT 157
+ APE + + KSDV++FGV+L E+ T
Sbjct: 170 AKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 70.5 bits (171), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 70/161 (43%), Gaps = 16/161 (9%)
Query: 3 SRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKI 62
S L+H N ++L GY D T L E+A G+++ L Q Q+
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---------QKLSKFDEQRTATY 118
Query: 63 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRV 122
A L Y H K +IHRDIK N+L+ KIADF S AP T +
Sbjct: 119 ITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTL 171
Query: 123 LGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVD 163
GT Y PE + K D++S GV+ E L G+ P +
Sbjct: 172 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 70.5 bits (171), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 70/161 (43%), Gaps = 16/161 (9%)
Query: 3 SRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKI 62
S L+H N ++L GY D T L E+A G+++ L Q Q+
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---------QKLSKFDEQRTATY 113
Query: 63 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRV 122
A L Y H K +IHRDIK N+L+ KIADF S AP T +
Sbjct: 114 ITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTXL 166
Query: 123 LGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVD 163
GT Y PE + K D++S GV+ E L G+ P +
Sbjct: 167 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 78/163 (47%), Gaps = 23/163 (14%)
Query: 7 HENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVK-------GAQPGPVLSWQQR 59
H N + LLG C LA E+A +G+L D L + ++ LS QQ
Sbjct: 82 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 141
Query: 60 VKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHS 119
+ A A+G++YL +K IHR++ + N+L+ ++ VAKIADF LS R
Sbjct: 142 LHFAADVARGMDYLSQK---QFIHRNLAARNILVGENYVAKIADFGLS--------RGQE 190
Query: 120 TRVLGTFGYHAPEYAMTGQLN-----AKSDVYSFGVVLLELLT 157
V T G + LN SDV+S+GV+L E+++
Sbjct: 191 VYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 70/161 (43%), Gaps = 16/161 (9%)
Query: 3 SRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKI 62
S L+H N ++L GY D T L E+A G+++ L Q Q+
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---------QKLSKFDEQRTATY 116
Query: 63 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRV 122
A L Y H K +IHRDIK N+L+ KIADF S AP T +
Sbjct: 117 ITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTL 169
Query: 123 LGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVD 163
GT Y PE + K D++S GV+ E L G+ P +
Sbjct: 170 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 70/161 (43%), Gaps = 16/161 (9%)
Query: 3 SRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKI 62
S L+H N ++L GY D T L E+A G+++ L Q Q+
Sbjct: 62 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---------QKLSKFDEQRTATY 112
Query: 63 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRV 122
A L Y H K +IHRDIK N+L+ KIADF S AP T +
Sbjct: 113 ITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTL 165
Query: 123 LGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVD 163
GT Y PE + K D++S GV+ E L G+ P +
Sbjct: 166 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 206
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 80/159 (50%), Gaps = 15/159 (9%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +KH N VQLLG C + EF + G+L D L R+ + VL +
Sbjct: 63 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVL-----L 115
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+A + +EYL +K + IHRD+ + N L+ ++ + K+ADF LS M ++
Sbjct: 116 YMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTYTA 169
Query: 121 RVLGTF--GYHAPEYAMTGQLNAKSDVYSFGVVLLELLT 157
F + APE + + KSDV++FGV+L E+ T
Sbjct: 170 PAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 208
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 72/164 (43%), Gaps = 17/164 (10%)
Query: 3 SRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKI 62
S L+H N ++L GY D T L E+A G+++ L Q Q+
Sbjct: 67 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---------QKLSRFDEQRTATY 117
Query: 63 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRV 122
A L Y H K +IHRDIK N+L+ + KIADF S AP T +
Sbjct: 118 ITELANALSYCHSK---RVIHRDIKPENLLLGSNGELKIADFGWSVHAPSS----RRTTL 170
Query: 123 LGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVD-HT 165
GT Y PE + K D++S GV+ E L G P + HT
Sbjct: 171 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHT 214
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 70/161 (43%), Gaps = 16/161 (9%)
Query: 3 SRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKI 62
S L+H N ++L GY D T L E+A G+++ L Q Q+
Sbjct: 60 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---------QKLSKFDEQRTATY 110
Query: 63 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRV 122
A L Y H K +IHRDIK N+L+ KIADF S AP T +
Sbjct: 111 ITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTL 163
Query: 123 LGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVD 163
GT Y PE + K D++S GV+ E L G+ P +
Sbjct: 164 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 204
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 70/161 (43%), Gaps = 16/161 (9%)
Query: 3 SRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKI 62
S L+H N ++L GY D T L E+A G+++ L Q Q+
Sbjct: 80 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---------QKLSKFDEQRTATY 130
Query: 63 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRV 122
A L Y H K +IHRDIK N+L+ KIADF S AP T +
Sbjct: 131 ITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTL 183
Query: 123 LGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVD 163
GT Y PE + K D++S GV+ E L G+ P +
Sbjct: 184 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 224
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 80/159 (50%), Gaps = 15/159 (9%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +KH N VQLLG C + EF + G+L D L R+ + VL +
Sbjct: 64 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVL-----L 116
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+A + +EYL +K + IHRD+ + N L+ ++ + K+ADF LS M ++
Sbjct: 117 YMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTYTA 170
Query: 121 RVLGTF--GYHAPEYAMTGQLNAKSDVYSFGVVLLELLT 157
F + APE + + KSDV++FGV+L E+ T
Sbjct: 171 PAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 70/161 (43%), Gaps = 16/161 (9%)
Query: 3 SRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKI 62
S L+H N ++L GY D T L E+A G+++ L Q Q+
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---------QKLSKFDEQRTATY 118
Query: 63 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRV 122
A L Y H K +IHRDIK N+L+ KIADF S AP T +
Sbjct: 119 ITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTL 171
Query: 123 LGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVD 163
GT Y PE + K D++S GV+ E L G+ P +
Sbjct: 172 CGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 70/161 (43%), Gaps = 16/161 (9%)
Query: 3 SRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKI 62
S L+H N ++L GY D T L E+A G+++ L Q Q+
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---------QKLSKFDEQRTATY 116
Query: 63 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRV 122
A L Y H K +IHRDIK N+L+ KIADF S AP T +
Sbjct: 117 ITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTL 169
Query: 123 LGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVD 163
GT Y PE + K D++S GV+ E L G+ P +
Sbjct: 170 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 70/161 (43%), Gaps = 16/161 (9%)
Query: 3 SRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKI 62
S L+H N ++L GY D T L E+A G+++ L Q Q+
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---------QKLSKFDEQRTATY 113
Query: 63 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRV 122
A L Y H K +IHRDIK N+L+ KIADF S AP T +
Sbjct: 114 ITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTDL 166
Query: 123 LGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVD 163
GT Y PE + K D++S GV+ E L G+ P +
Sbjct: 167 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 70/161 (43%), Gaps = 16/161 (9%)
Query: 3 SRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKI 62
S L+H N ++L GY D T L E+A G+++ L Q Q+
Sbjct: 64 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---------QKLSKFDEQRTATY 114
Query: 63 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRV 122
A L Y H K +IHRDIK N+L+ KIADF S AP T +
Sbjct: 115 ITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTDL 167
Query: 123 LGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVD 163
GT Y PE + K D++S GV+ E L G+ P +
Sbjct: 168 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 208
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 70/161 (43%), Gaps = 16/161 (9%)
Query: 3 SRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKI 62
S L+H N ++L GY D T L E+A G+++ L Q Q+
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---------QKLSKFDEQRTATY 113
Query: 63 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRV 122
A L Y H K +IHRDIK N+L+ KIADF S AP T +
Sbjct: 114 ITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTDL 166
Query: 123 LGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVD 163
GT Y PE + K D++S GV+ E L G+ P +
Sbjct: 167 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 80/162 (49%), Gaps = 17/162 (10%)
Query: 5 LKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAV 64
L HE VQL G C + E+ +NG L + L R+ Q QQ +++
Sbjct: 60 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL--REMRHRFQT------QQLLEMCK 111
Query: 65 GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLG 124
+ +EYL K +HRD+ + N L+ D V K++DF LS D +++ V
Sbjct: 112 DVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE---YTSSVGS 165
Query: 125 TF--GYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKPVD 163
F + PE M + ++KSD+++FGV++ E+ + G+ P +
Sbjct: 166 KFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE 207
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 70/161 (43%), Gaps = 16/161 (9%)
Query: 3 SRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKI 62
S L+H N ++L GY D T L E+A G+++ L Q Q+
Sbjct: 64 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---------QKLSKFDEQRTATY 114
Query: 63 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRV 122
A L Y H K +IHRDIK N+L+ KIADF S AP T +
Sbjct: 115 ITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSCHAPSS----RRTTL 167
Query: 123 LGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVD 163
GT Y PE + K D++S GV+ E L G+ P +
Sbjct: 168 SGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 208
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 70/161 (43%), Gaps = 16/161 (9%)
Query: 3 SRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKI 62
S L+H N ++L GY D T L E+A G+++ L Q Q+
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---------QKLSKFDEQRTATY 118
Query: 63 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRV 122
A L Y H K +IHRDIK N+L+ KIADF S AP T +
Sbjct: 119 ITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTDL 171
Query: 123 LGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVD 163
GT Y PE + K D++S GV+ E L G+ P +
Sbjct: 172 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 82/164 (50%), Gaps = 16/164 (9%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ L+H+ V+L + EF + GSL D L +G K P + +
Sbjct: 60 LMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLP-------KLI 112
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+ A+G+ Y+ K + IHRD++++NVL+ + + KIADF L+ D ++
Sbjct: 113 DFSAQIAEGMAYIERK---NYIHRDLRAANVLVSESLMCKIADFGLARVIED---NEYTA 166
Query: 121 RVLGTF--GYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
R F + APE G KS+V+SFG++L E++T G+ P
Sbjct: 167 REGAKFPIKWTAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIP 210
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 82/164 (50%), Gaps = 16/164 (9%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ L+H+ V+L + E+ + GSL D L +G K P + +
Sbjct: 61 LMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLP-------KLI 113
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+ A+G+ Y+ K + IHRD++++NVL+ + + KIADF L+ D ++
Sbjct: 114 DFSAQIAEGMAYIERK---NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNE---YTA 167
Query: 121 RVLGTF--GYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
R F + APE G KSDV+SFG++L E++T G+ P
Sbjct: 168 REGAKFPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIP 211
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 78/162 (48%), Gaps = 17/162 (10%)
Query: 5 LKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAV 64
L HE VQL G C + E+ +NG L + L + QQ +++
Sbjct: 76 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMR--------HRFQTQQLLEMCK 127
Query: 65 GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLG 124
+ +EYL K +HRD+ + N L+ D V K++DF LS D +++ V
Sbjct: 128 DVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE---YTSSVGS 181
Query: 125 TF--GYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKPVD 163
F + PE M + ++KSD+++FGV++ E+ + G+ P +
Sbjct: 182 KFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE 223
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 80/162 (49%), Gaps = 17/162 (10%)
Query: 5 LKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAV 64
L HE VQL G C + E+ +NG L + L R+ Q QQ +++
Sbjct: 61 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL--REMRHRFQT------QQLLEMCK 112
Query: 65 GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLG 124
+ +EYL K +HRD+ + N L+ D V K++DF LS D +++ V
Sbjct: 113 DVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE---YTSSVGS 166
Query: 125 TF--GYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKPVD 163
F + PE M + ++KSD+++FGV++ E+ + G+ P +
Sbjct: 167 KFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE 208
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 103/238 (43%), Gaps = 32/238 (13%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +KH N VQLLG C + EF + G+L D L R+ + VL +
Sbjct: 269 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVL-----L 321
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+A + +EYL +K + IHR++ + N L+ ++ + K+ADF LS M ++
Sbjct: 322 YMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRL---MTGDTYTA 375
Query: 121 RVLGTF--GYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKPVDHTLPRGQQSLVTWA 177
F + APE + + KSDV++FGV+L E+ T G P
Sbjct: 376 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY--------------- 420
Query: 178 TPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXXLCVQYEADFRPNMSIVVKALQPLL 235
P + +V + ++ + P C Q+ RP+ + + +A + +
Sbjct: 421 -PGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 477
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 80/162 (49%), Gaps = 17/162 (10%)
Query: 5 LKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAV 64
L HE VQL G C + E+ +NG L + L R+ Q QQ +++
Sbjct: 56 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL--REMRHRFQT------QQLLEMCK 107
Query: 65 GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLG 124
+ +EYL K +HRD+ + N L+ D V K++DF LS D +++ V
Sbjct: 108 DVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE---YTSSVGS 161
Query: 125 TF--GYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKPVD 163
F + PE M + ++KSD+++FGV++ E+ + G+ P +
Sbjct: 162 KFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE 203
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 80/162 (49%), Gaps = 17/162 (10%)
Query: 5 LKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAV 64
L HE VQL G C + E+ +NG L + L R+ Q QQ +++
Sbjct: 67 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL--REMRHRFQT------QQLLEMCK 118
Query: 65 GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLG 124
+ +EYL K +HRD+ + N L+ D V K++DF LS D +++ V
Sbjct: 119 DVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE---YTSSVGS 172
Query: 125 TF--GYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKPVD 163
F + PE M + ++KSD+++FGV++ E+ + G+ P +
Sbjct: 173 KFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE 214
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 68/138 (49%), Gaps = 15/138 (10%)
Query: 25 LAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHR 84
+ E GSL +L K + P +L K+++ +GL YL EK I+HR
Sbjct: 91 ICMEHMDGGSLDQVLKEAKRI----PEEILG-----KVSIAVLRGLAYLREKH--QIMHR 139
Query: 85 DIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSD 144
D+K SN+L+ K+ DF +S Q D A +GT Y APE + +SD
Sbjct: 140 DVKPSNILVNSRGEIKLCDFGVSGQLIDSMA----NSFVGTRSYMAPERLQGTHYSVQSD 195
Query: 145 VYSFGVVLLELLTGRKPV 162
++S G+ L+EL GR P+
Sbjct: 196 IWSMGLSLVELAVGRYPI 213
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 81/177 (45%), Gaps = 19/177 (10%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKG--------------VK 46
+++ + N V+LLG C G L +E+ + G L++ L +
Sbjct: 103 LMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRAR 162
Query: 47 GAQPGPV-LSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFD 105
+ PGP LS +++ IA A G+ YL E+ +HRD+ + N L+ ++ V KIADF
Sbjct: 163 VSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFG 219
Query: 106 LSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
LS + PE + +SDV+++GVVL E+ + G +P
Sbjct: 220 LSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQP 276
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 93/224 (41%), Gaps = 31/224 (13%)
Query: 15 GYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLH 74
G + T + E+ GS D+L +PGP L Q I KGL+YLH
Sbjct: 87 GSYLKDTKLWIIMEYLGGGSALDLL---------EPGP-LDETQIATILREILKGLDYLH 136
Query: 75 EKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYA 134
+ IHRDIK++NVL+ + K+ADF ++ Q D ++ +GT + APE
Sbjct: 137 SEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTD--TQIKRNXFVGTPFWMAPEVI 191
Query: 135 MTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARL 194
++K+D++S G+ +EL G P P L+ P L
Sbjct: 192 KQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP------------PTL 239
Query: 195 GGDYPPXXXXXXXXXXXLCVQYEADFRPNMSIVVKALQPLLNAR 238
G+Y C+ E FRP ++K L NA+
Sbjct: 240 EGNY----SKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNAK 279
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 68/161 (42%), Gaps = 16/161 (9%)
Query: 3 SRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKI 62
S L+H N ++L GY D T L E+A G ++ K Q Q+
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYLILEYAPRGEVY---------KELQKLSKFDEQRTATY 118
Query: 63 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRV 122
A L Y H K +IHRDIK N+L+ KIADF S AP +
Sbjct: 119 ITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRXXL 171
Query: 123 LGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVD 163
GT Y PE + K D++S GV+ E L G+ P +
Sbjct: 172 XGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 81/177 (45%), Gaps = 29/177 (16%)
Query: 5 LKHENFVQLLGYCVDGTSR----VLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
+KHEN +Q + G++ L F GSL D L G +++W +
Sbjct: 66 MKHENLLQFIAAEKRGSNLEVELWLITAFHDKGSLTDYLKGN----------IITWNELC 115
Query: 61 KIAVGAAKGLEYLHEKA--------DPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 112
+A ++GL YLHE P I HRD KS NVL+ D A +ADF L+ +
Sbjct: 116 HVAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEP 175
Query: 113 MAARLHSTRVLGTFGYHAPEYAMTGQLN------AKSDVYSFGVVLLELLTGRKPVD 163
+ +GT Y APE + G +N + D+Y+ G+VL EL++ K D
Sbjct: 176 GKPPGDTHGQVGTRRYMAPE-VLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAAD 231
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 93/224 (41%), Gaps = 31/224 (13%)
Query: 15 GYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLH 74
G + T + E+ GS D+L +PGP L Q I KGL+YLH
Sbjct: 72 GSYLKDTKLWIIMEYLGGGSALDLL---------EPGP-LDETQIATILREILKGLDYLH 121
Query: 75 EKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYA 134
+ IHRDIK++NVL+ + K+ADF ++ Q D ++ +GT + APE
Sbjct: 122 SEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTD--TQIKRNXFVGTPFWMAPEVI 176
Query: 135 MTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARL 194
++K+D++S G+ +EL G P P L+ P L
Sbjct: 177 KQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP------------PTL 224
Query: 195 GGDYPPXXXXXXXXXXXLCVQYEADFRPNMSIVVKALQPLLNAR 238
G+Y C+ E FRP ++K L NA+
Sbjct: 225 EGNYSKPLKEFVEA----CLNKEPSFRPTAKELLKHKFILRNAK 264
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 103/238 (43%), Gaps = 32/238 (13%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +KH N VQLLG C + EF + G+L D L R+ + VL +
Sbjct: 308 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVL-----L 360
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+A + +EYL +K + IHR++ + N L+ ++ + K+ADF LS M ++
Sbjct: 361 YMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRL---MTGDTYTA 414
Query: 121 RVLGTF--GYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKPVDHTLPRGQQSLVTWA 177
F + APE + + KSDV++FGV+L E+ T G P
Sbjct: 415 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY--------------- 459
Query: 178 TPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXXLCVQYEADFRPNMSIVVKALQPLL 235
P + +V + ++ + P C Q+ RP+ + + +A + +
Sbjct: 460 -PGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 516
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 93/224 (41%), Gaps = 31/224 (13%)
Query: 15 GYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLH 74
G + T + E+ GS D+L +PGP L Q I KGL+YLH
Sbjct: 72 GSYLKDTKLWIIMEYLGGGSALDLL---------EPGP-LDETQIATILREILKGLDYLH 121
Query: 75 EKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYA 134
+ IHRDIK++NVL+ + K+ADF ++ Q D ++ +GT + APE
Sbjct: 122 SEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTD--TQIKRNTFVGTPFWMAPEVI 176
Query: 135 MTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARL 194
++K+D++S G+ +EL G P P L+ P L
Sbjct: 177 KQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP------------PTL 224
Query: 195 GGDYPPXXXXXXXXXXXLCVQYEADFRPNMSIVVKALQPLLNAR 238
G+Y C+ E FRP ++K L NA+
Sbjct: 225 EGNYSKPLKEFVEA----CLNKEPSFRPTAKELLKHKFILRNAK 264
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 17/162 (10%)
Query: 5 LKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAV 64
L HE VQL G C + E+ +NG L + L + QQ +++
Sbjct: 76 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMR--------HRFQTQQLLEMCK 127
Query: 65 GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLG 124
+ +EYL K +HRD+ + N L+ D V K++DF LS D ++ V
Sbjct: 128 DVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE---ETSSVGS 181
Query: 125 TF--GYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKPVD 163
F + PE M + ++KSD+++FGV++ E+ + G+ P +
Sbjct: 182 KFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE 223
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 103/238 (43%), Gaps = 32/238 (13%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +KH N VQLLG C + EF + G+L D L R+ + VL +
Sbjct: 266 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVL-----L 318
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+A + +EYL +K + IHR++ + N L+ ++ + K+ADF LS M ++
Sbjct: 319 YMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRL---MTGDTYTA 372
Query: 121 RVLGTF--GYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKPVDHTLPRGQQSLVTWA 177
F + APE + + KSDV++FGV+L E+ T G P
Sbjct: 373 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY--------------- 417
Query: 178 TPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXXLCVQYEADFRPNMSIVVKALQPLL 235
P + +V + ++ + P C Q+ RP+ + + +A + +
Sbjct: 418 -PGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 474
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 8/157 (5%)
Query: 6 KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPG-----PVLSWQQRV 60
+HEN V LLG C G ++ E+ G L + L + V P LS + +
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLL 167
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+ A+G+ +L A + IHRD+ + NVL+ + VAKI DF L+ + + +
Sbjct: 168 HFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKG 224
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT 157
+ APE +SDV+S+G++L E+ +
Sbjct: 225 NARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 79/165 (47%), Gaps = 15/165 (9%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ + H N + L G T ++ EF NGSL L G + Q V
Sbjct: 61 IMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQ--------FTVIQLV 112
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+ G A G++YL AD + +HR + + N+L+ + V K++DF LS D + T
Sbjct: 113 GMLRGIAAGMKYL---ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYT 169
Query: 121 RVLG---TFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
LG + APE + + SDV+S+G+V+ E+++ G +P
Sbjct: 170 SALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 214
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 102/239 (42%), Gaps = 29/239 (12%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ + H N ++L G ++ E+ NG+L L + G S Q V
Sbjct: 99 IMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGE--------FSVLQLV 150
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+ G A G++YL A+ + +HRD+ + N+L+ + V K++DF LS D ++T
Sbjct: 151 GMLRGIAAGMKYL---ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTT 207
Query: 121 RVLGT-FGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKPVDHTLPRGQQSLVTWAT 178
+ APE + + SDV+SFG+V+ E++T G +P W
Sbjct: 208 SGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPY-------------W-- 252
Query: 179 PKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXXLCVQYEADFRPNMSIVVKALQPLLNA 237
+LS +V + ++ P C Q E RP + +V L L+ A
Sbjct: 253 -ELSNHEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRA 310
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 93/224 (41%), Gaps = 31/224 (13%)
Query: 15 GYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLH 74
G + T + E+ GS D+L +PGP L Q I KGL+YLH
Sbjct: 92 GSYLKDTKLWIIMEYLGGGSALDLL---------EPGP-LDETQIATILREILKGLDYLH 141
Query: 75 EKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYA 134
+ IHRDIK++NVL+ + K+ADF ++ Q D ++ +GT + APE
Sbjct: 142 SEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTD--TQIKRNTFVGTPFWMAPEVI 196
Query: 135 MTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARL 194
++K+D++S G+ +EL G P P L+ P L
Sbjct: 197 KQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP------------PTL 244
Query: 195 GGDYPPXXXXXXXXXXXLCVQYEADFRPNMSIVVKALQPLLNAR 238
G+Y C+ E FRP ++K L NA+
Sbjct: 245 EGNYSKPLKEFVEA----CLNKEPSFRPTAKELLKHKFILRNAK 284
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 70/161 (43%), Gaps = 16/161 (9%)
Query: 3 SRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKI 62
S L+H N ++L GY D T L E+A G+++ L Q Q+
Sbjct: 65 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---------QKLSKFDEQRTATY 115
Query: 63 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRV 122
A L Y H K +IHRDIK N+L+ KIA+F S AP T +
Sbjct: 116 ITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIANFGWSVHAPSS----RRTTL 168
Query: 123 LGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVD 163
GT Y PE + K D++S GV+ E L G+ P +
Sbjct: 169 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 209
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 80/172 (46%), Gaps = 18/172 (10%)
Query: 1 MVSRL-KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGR--------------KGV 45
M+++L HEN V LLG C L +E+ G L + L + K +
Sbjct: 101 MMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRL 160
Query: 46 KGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFD 105
+ + VL+++ + A AKG+E+L K+ +HRD+ + NVL+ V KI DF
Sbjct: 161 EEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS---CVHRDLAARNVLVTHGKVVKICDFG 217
Query: 106 LSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT 157
L+ + + + APE G KSDV+S+G++L E+ +
Sbjct: 218 LARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 70/161 (43%), Gaps = 16/161 (9%)
Query: 3 SRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKI 62
S L+H N ++L GY D T L E+A G+++ L Q Q+
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---------QKLSKFDEQRTATY 116
Query: 63 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRV 122
A L Y H K +IHRDIK N+L+ KIA+F S AP T +
Sbjct: 117 ITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIANFGWSVHAPSS----RRTTL 169
Query: 123 LGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVD 163
GT Y PE + K D++S GV+ E L G+ P +
Sbjct: 170 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 80/164 (48%), Gaps = 16/164 (9%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +KH N VQLLG C + E+ G+L D L R+ + VL +
Sbjct: 81 VMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYL--RECNREEVTAVVL-----L 133
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+A + +EYL +K + IHRD+ + N L+ ++ V K+ADF LS M ++
Sbjct: 134 YMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHVVKVADFGLSRL---MTGDTYTA 187
Query: 121 RVLGTF--GYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
F + APE + KSDV++FGV+L E+ T G P
Sbjct: 188 HAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSP 231
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 101/236 (42%), Gaps = 19/236 (8%)
Query: 1 MVSRLKHENFVQLLGYCVDG--TSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQ 58
++ L HE+ ++ G C D S L E+ GSL D L P + Q
Sbjct: 69 ILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL----------PRHSIGLAQ 118
Query: 59 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLH 118
+ A +G+ YLH + H IHR++ + NVL+ +D + KI DF L+ P+ +
Sbjct: 119 LLLFAQQICEGMAYLHSQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPE-GHEYY 174
Query: 119 STRVLGT--FGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTW 176
R G ++APE + SDV+SFGV L ELLT + P L+
Sbjct: 175 RVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT-HCDSSQSPPTKFLELIGI 233
Query: 177 ATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXXLCVQYEADFRPNMSIVVKALQ 232
A +++ ++ + ++ P C + EA FRP ++ L+
Sbjct: 234 AQGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILK 289
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 90/223 (40%), Gaps = 19/223 (8%)
Query: 11 VQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPG-PVLSWQQRVKIAVGAAKG 69
V+LLG G ++ E ++G L L + PG P + Q+ +++A A G
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 70 LEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYH 129
+ YL+ K +HRD+ + N ++ D KI DF ++ + + L +
Sbjct: 143 MAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 199
Query: 130 APEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQC 189
APE G SD++SFGVVL E+ SL LS ++V +
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEI---------------TSLAEQPYQGLSNEQVLKF 244
Query: 190 VDARLGGDYPPXXXXXXXXXXXLCVQYEADFRPNMSIVVKALQ 232
V D P +C Q+ + RP +V L+
Sbjct: 245 VMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLK 287
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 90/223 (40%), Gaps = 19/223 (8%)
Query: 11 VQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPG-PVLSWQQRVKIAVGAAKG 69
V+LLG G ++ E ++G L L + PG P + Q+ +++A A G
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 70 LEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYH 129
+ YL+ K +HRD+ + N ++ D KI DF ++ + A + L +
Sbjct: 143 MAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWM 199
Query: 130 APEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQC 189
APE G SD++SFGVVL E+ SL LS ++V +
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEI---------------TSLAEQPYQGLSNEQVLKF 244
Query: 190 VDARLGGDYPPXXXXXXXXXXXLCVQYEADFRPNMSIVVKALQ 232
V D P +C Q+ RP +V L+
Sbjct: 245 VMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 287
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 73/161 (45%), Gaps = 17/161 (10%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
M+S + H +++ G D + ++ G L +L RK + P PV +
Sbjct: 59 MLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLL--RKSQRF--PNPVAKF---- 110
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
A LEYLH K II+RD+K N+L+ + KI DF + PD+ L
Sbjct: 111 -YAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYXL--- 163
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
GT Y APE T N D +SFG+++ E+L G P
Sbjct: 164 --CGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTP 202
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 69/161 (42%), Gaps = 16/161 (9%)
Query: 3 SRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKI 62
S L+H N ++L GY D T L E+A G+++ L Q Q+
Sbjct: 65 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---------QKLSKFDEQRTATY 115
Query: 63 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRV 122
A L Y H K +IHRDIK N+L+ KIADF S AP +
Sbjct: 116 ITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRXXL 168
Query: 123 LGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVD 163
GT Y PE + K D++S GV+ E L G+ P +
Sbjct: 169 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 209
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 69/161 (42%), Gaps = 16/161 (9%)
Query: 3 SRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKI 62
S L+H N ++L GY D T L E+A G+++ L Q Q+
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---------QKLSKFDEQRTATY 113
Query: 63 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRV 122
A L Y H K +IHRDIK N+L+ KIADF S AP +
Sbjct: 114 ITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRXXL 166
Query: 123 LGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVD 163
GT Y PE + K D++S GV+ E L G+ P +
Sbjct: 167 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 13/161 (8%)
Query: 3 SRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKI 62
S+L H+N V ++ + L E+ +L + + GP LS +
Sbjct: 66 SQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESH--------GP-LSVDTAINF 116
Query: 63 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRV 122
G+++ H D I+HRDIK N+LI + KI DF ++ +A + + V
Sbjct: 117 TNQILDGIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIA-KALSETSLTQTNHV 172
Query: 123 LGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVD 163
LGT Y +PE A + +D+YS G+VL E+L G P +
Sbjct: 173 LGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFN 213
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 69/161 (42%), Gaps = 16/161 (9%)
Query: 3 SRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKI 62
S L+H N ++L GY D T L E+A G+++ L Q Q+
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---------QKLSKFDEQRTATY 116
Query: 63 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRV 122
A L Y H K +IHRDIK N+L+ KIADF S AP +
Sbjct: 117 ITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRAAL 169
Query: 123 LGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVD 163
GT Y PE + K D++S GV+ E L G+ P +
Sbjct: 170 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 69/161 (42%), Gaps = 16/161 (9%)
Query: 3 SRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKI 62
S L+H N ++L GY D T L E+A G+++ L Q Q+
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---------QKLSKFDEQRTATY 116
Query: 63 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRV 122
A L Y H K +IHRDIK N+L+ KIADF S AP +
Sbjct: 117 ITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRXXL 169
Query: 123 LGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVD 163
GT Y PE + K D++S GV+ E L G+ P +
Sbjct: 170 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 101/236 (42%), Gaps = 19/236 (8%)
Query: 1 MVSRLKHENFVQLLGYCVDG--TSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQ 58
++ L HE+ ++ G C D S L E+ GSL D L P + Q
Sbjct: 69 ILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL----------PRHSIGLAQ 118
Query: 59 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLH 118
+ A +G+ YLH + H IHR++ + NVL+ +D + KI DF L+ P+ +
Sbjct: 119 LLLFAQQICEGMAYLHAQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPE-GHEYY 174
Query: 119 STRVLGT--FGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTW 176
R G ++APE + SDV+SFGV L ELLT + P L+
Sbjct: 175 RVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT-HCDSSQSPPTKFLELIGI 233
Query: 177 ATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXXLCVQYEADFRPNMSIVVKALQ 232
A +++ ++ + ++ P C + EA FRP ++ L+
Sbjct: 234 AQGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILK 289
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 72/164 (43%), Gaps = 22/164 (13%)
Query: 3 SRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKI 62
S L+H N ++L GY D T L E+A G+++ L Q Q+
Sbjct: 89 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---------QKLSKFDEQRTATY 139
Query: 63 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTR- 121
A L Y H K +IHRDIK N+L+ KIADF S AP S+R
Sbjct: 140 ITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP-------SSRR 189
Query: 122 --VLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVD 163
+ GT Y PE + K D++S GV+ E L G+ P +
Sbjct: 190 DDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 233
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 82/161 (50%), Gaps = 13/161 (8%)
Query: 2 VSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVK 61
+ L H + V+LLG C G+S L ++ GSL D + +G G P +L+W
Sbjct: 87 IGSLDHAHIVRLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALG--PQLLLNW----- 138
Query: 62 IAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTR 121
V AKG+ YL E ++HR++ + NVL+ ++ADF +++ P +L +
Sbjct: 139 -GVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSE 194
Query: 122 VLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
+ A E G+ +SDV+S+GV + EL+T G +P
Sbjct: 195 AKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEP 235
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 73/161 (45%), Gaps = 16/161 (9%)
Query: 3 SRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKI 62
S L+H N ++L GY D T L E+A G+++ L Q Q+
Sbjct: 64 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---------QKLSKFDEQRTATY 114
Query: 63 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRV 122
A L Y H K +IHRDIK N+L+ KIADF S AP ++R + +
Sbjct: 115 ITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP--SSRRDT--L 167
Query: 123 LGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVD 163
GT Y PE + K D++S GV+ E L G+ P +
Sbjct: 168 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 208
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 69/161 (42%), Gaps = 16/161 (9%)
Query: 3 SRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKI 62
S L+H N ++L GY D T L E+A G+++ L Q Q+
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---------QKLSKFDEQRTATY 113
Query: 63 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRV 122
A L Y H K +IHRDIK N+L+ KIADF S AP +
Sbjct: 114 ITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRAAL 166
Query: 123 LGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVD 163
GT Y PE + K D++S GV+ E L G+ P +
Sbjct: 167 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 76/161 (47%), Gaps = 18/161 (11%)
Query: 1 MVSRLKHENFVQLLGYCVD-GTSRV-LAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQ 58
++ L HE+ V+ G C D G V L E+ GSL D L P + Q
Sbjct: 63 ILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL----------PRHCVGLAQ 112
Query: 59 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLH 118
+ A +G+ YLH + H IHR + + NVL+ +D + KI DF L+ P+ +
Sbjct: 113 LLLFAQQICEGMAYLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPE-GHEYY 168
Query: 119 STRVLGT--FGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT 157
R G ++APE + SDV+SFGV L ELLT
Sbjct: 169 RVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 76/161 (47%), Gaps = 18/161 (11%)
Query: 1 MVSRLKHENFVQLLGYCVD-GTSRV-LAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQ 58
++ L HE+ V+ G C D G V L E+ GSL D L P + Q
Sbjct: 64 ILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL----------PRHCVGLAQ 113
Query: 59 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLH 118
+ A +G+ YLH + H IHR + + NVL+ +D + KI DF L+ P+ +
Sbjct: 114 LLLFAQQICEGMAYLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPE-GHEYY 169
Query: 119 STRVLGT--FGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT 157
R G ++APE + SDV+SFGV L ELLT
Sbjct: 170 RVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 82/161 (50%), Gaps = 13/161 (8%)
Query: 2 VSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVK 61
+ L H + V+LLG C G+S L ++ GSL D + +G G P +L+W
Sbjct: 69 IGSLDHAHIVRLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALG--PQLLLNW----- 120
Query: 62 IAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTR 121
V AKG+ YL E ++HR++ + NVL+ ++ADF +++ P +L +
Sbjct: 121 -GVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSE 176
Query: 122 VLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
+ A E G+ +SDV+S+GV + EL+T G +P
Sbjct: 177 AKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEP 217
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 77/165 (46%), Gaps = 17/165 (10%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ + H N ++L G G ++ E+ NGSL L G + Q V
Sbjct: 103 IMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQ--------FTIMQLV 154
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS---NQAPDMAARL 117
+ G G+ YL +D +HRD+ + NVL+ + V K++DF LS PD A
Sbjct: 155 GMLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTT 211
Query: 118 HSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
++ + APE ++ SDV+SFGVV+ E+L G +P
Sbjct: 212 TGGKI--PIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERP 254
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 69/161 (42%), Gaps = 16/161 (9%)
Query: 3 SRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKI 62
S L+H N ++L GY D T L E+A G+++ L Q Q+
Sbjct: 63 SHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYREL---------QKLSKFDEQRTATY 113
Query: 63 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRV 122
A L Y H K +IHRDIK N+L+ KIADF S AP +
Sbjct: 114 ITELANALSYCHSKK---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRAAL 166
Query: 123 LGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVD 163
GT Y PE + K D++S GV+ E L G+ P +
Sbjct: 167 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 72/164 (43%), Gaps = 22/164 (13%)
Query: 3 SRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKI 62
S L+H N ++L GY D T L E+A G+++ L Q Q+
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---------QKLSKFDEQRTATY 116
Query: 63 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTR- 121
A L Y H K +IHRDIK N+L+ KIADF S AP S+R
Sbjct: 117 ITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP-------SSRR 166
Query: 122 --VLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVD 163
+ GT Y PE + K D++S GV+ E L G+ P +
Sbjct: 167 DDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 75/164 (45%), Gaps = 17/164 (10%)
Query: 3 SRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKI 62
S L+H N ++L GY D T L E+A G+++ L Q Q+
Sbjct: 67 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---------QKLSRFDEQRTATY 117
Query: 63 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRV 122
A L Y H K +IHRDIK N+L+ + KIADF S AP ++R + +
Sbjct: 118 ITELANALSYCHSK---RVIHRDIKPENLLLGSNGELKIADFGWSVHAP--SSRRDT--L 170
Query: 123 LGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVD-HT 165
GT Y PE + K D++S GV+ E L G P + HT
Sbjct: 171 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHT 214
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 78/177 (44%), Gaps = 25/177 (14%)
Query: 5 LKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAV 64
L+H N ++ +G E+ G+L I+ K + P W QRV A
Sbjct: 64 LEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGII---KSMDSQYP-----WSQRVSFAK 115
Query: 65 GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTR--- 121
A G+ YLH +IIHRD+ S N L+ ++ +ADF L+ D + R
Sbjct: 116 DIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLK 172
Query: 122 ---------VLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVD-HTLPR 168
V+G + APE + K DV+SFG+VL E++ GR D LPR
Sbjct: 173 KPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII-GRVNADPDYLPR 228
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 89/223 (39%), Gaps = 19/223 (8%)
Query: 11 VQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPG-PVLSWQQRVKIAVGAAKG 69
V+LLG G ++ E ++G L L + PG P + Q+ +++A A G
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 70 LEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYH 129
+ YL+ K +HRD+ + N ++ D KI DF ++ + + L +
Sbjct: 143 MAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 199
Query: 130 APEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQC 189
APE G SD++SFGVVL E+ SL LS ++V +
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEI---------------TSLAEQPYQGLSNEQVLKF 244
Query: 190 VDARLGGDYPPXXXXXXXXXXXLCVQYEADFRPNMSIVVKALQ 232
V D P +C Q+ RP +V L+
Sbjct: 245 VMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 287
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 80/163 (49%), Gaps = 19/163 (11%)
Query: 5 LKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAV 64
L HE VQL G C + E+ +NG L + L R+ Q QQ +++
Sbjct: 61 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL--REMRHRFQT------QQLLEMCK 112
Query: 65 GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLG 124
+ +EYL K +HRD+ + N L+ D V K++DF LS D S+R G
Sbjct: 113 DVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD--DEYTSSR--G 165
Query: 125 T---FGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKPVD 163
+ + PE M + ++KSD+++FGV++ E+ + G+ P +
Sbjct: 166 SKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE 208
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 67/138 (48%), Gaps = 15/138 (10%)
Query: 25 LAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHR 84
+ E GSL +L G P +L K+++ KGL YL EK I+HR
Sbjct: 100 ICMEHMDGGSLDQVLKK----AGRIPEQILG-----KVSIAVIKGLTYLREKHK--IMHR 148
Query: 85 DIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSD 144
D+K SN+L+ K+ DF +S Q D A +GT Y +PE + +SD
Sbjct: 149 DVKPSNILVNSRGEIKLCDFGVSGQLIDSMA----NSFVGTRSYMSPERLQGTHYSVQSD 204
Query: 145 VYSFGVVLLELLTGRKPV 162
++S G+ L+E+ GR P+
Sbjct: 205 IWSMGLSLVEMAVGRYPI 222
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 56/102 (54%), Gaps = 6/102 (5%)
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
K+++ KGL YL EK I+HRD+K SN+L+ K+ DF +S Q D A
Sbjct: 170 KVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA----N 223
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPV 162
+GT Y +PE + +SD++S G+ L+E+ GR P+
Sbjct: 224 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 265
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 67/138 (48%), Gaps = 15/138 (10%)
Query: 25 LAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHR 84
+ E GSL +L G P +L K+++ KGL YL EK I+HR
Sbjct: 108 ICMEHMDGGSLDQVLKK----AGRIPEQILG-----KVSIAVIKGLTYLREKH--KIMHR 156
Query: 85 DIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSD 144
D+K SN+L+ K+ DF +S Q D A +GT Y +PE + +SD
Sbjct: 157 DVKPSNILVNSRGEIKLCDFGVSGQLIDSMA----NSFVGTRSYMSPERLQGTHYSVQSD 212
Query: 145 VYSFGVVLLELLTGRKPV 162
++S G+ L+E+ GR P+
Sbjct: 213 IWSMGLSLVEMAVGRYPI 230
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 56/102 (54%), Gaps = 6/102 (5%)
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
K+++ KGL YL EK I+HRD+K SN+L+ K+ DF +S Q D A
Sbjct: 108 KVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA----N 161
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPV 162
+GT Y +PE + +SD++S G+ L+E+ GR P+
Sbjct: 162 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 56/102 (54%), Gaps = 6/102 (5%)
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
K+++ KGL YL EK I+HRD+K SN+L+ K+ DF +S Q D A
Sbjct: 108 KVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA----N 161
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPV 162
+GT Y +PE + +SD++S G+ L+E+ GR P+
Sbjct: 162 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 77/165 (46%), Gaps = 17/165 (10%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ + H N ++L G G ++ E+ NGSL L G + Q V
Sbjct: 103 IMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQ--------FTIMQLV 154
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS---NQAPDMAARL 117
+ G G+ YL +D +HRD+ + NVL+ + V K++DF LS PD A
Sbjct: 155 GMLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTT 211
Query: 118 HSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
++ + APE ++ SDV+SFGVV+ E+L G +P
Sbjct: 212 TGGKI--PIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERP 254
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 56/102 (54%), Gaps = 6/102 (5%)
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
K+++ KGL YL EK I+HRD+K SN+L+ K+ DF +S Q D A
Sbjct: 108 KVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA----N 161
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPV 162
+GT Y +PE + +SD++S G+ L+E+ GR P+
Sbjct: 162 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 89/223 (39%), Gaps = 19/223 (8%)
Query: 11 VQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPG-PVLSWQQRVKIAVGAAKG 69
V+LLG G ++ E ++G L L + PG P + Q+ +++A A G
Sbjct: 80 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 139
Query: 70 LEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYH 129
+ YL+ K +HRD+ + N ++ D KI DF ++ + + L +
Sbjct: 140 MAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 196
Query: 130 APEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQC 189
APE G SD++SFGVVL E+ SL LS ++V +
Sbjct: 197 APESLKDGVFTTSSDMWSFGVVLWEI---------------TSLAEQPYQGLSNEQVLKF 241
Query: 190 VDARLGGDYPPXXXXXXXXXXXLCVQYEADFRPNMSIVVKALQ 232
V D P +C Q+ RP +V L+
Sbjct: 242 VMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 284
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 56/102 (54%), Gaps = 6/102 (5%)
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
K+++ KGL YL EK I+HRD+K SN+L+ K+ DF +S Q D A
Sbjct: 108 KVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA----N 161
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPV 162
+GT Y +PE + +SD++S G+ L+E+ GR P+
Sbjct: 162 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 56/102 (54%), Gaps = 6/102 (5%)
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
K+++ KGL YL EK I+HRD+K SN+L+ K+ DF +S Q D A
Sbjct: 108 KVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA----N 161
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPV 162
+GT Y +PE + +SD++S G+ L+E+ GR P+
Sbjct: 162 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 80/167 (47%), Gaps = 21/167 (12%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ + H N V L G G ++ EF NG+L L G + Q V
Sbjct: 97 IMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQ--------FTVIQLV 148
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+ G A G+ YL AD +HRD+ + N+L+ + V K++DF LS D +++T
Sbjct: 149 GMLRGIAAGMRYL---ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTT 205
Query: 121 RVLGTFG-----YHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
T G + APE + + SDV+S+G+V+ E+++ G +P
Sbjct: 206 ----TGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 248
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 73/160 (45%), Gaps = 13/160 (8%)
Query: 4 RLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIA 63
+LKH + ++L Y D L E NG ++ L R VK + ++
Sbjct: 67 QLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNR--VKPFSENEARHFMHQI--- 121
Query: 64 VGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVL 123
G+ YLH I+HRD+ SN+L+ + KIADF L+ Q M H T +
Sbjct: 122 ---ITGMLYLHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLK-MPHEKHYT-LC 173
Query: 124 GTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVD 163
GT Y +PE A +SDV+S G + LL GR P D
Sbjct: 174 GTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFD 213
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 88/164 (53%), Gaps = 16/164 (9%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +L + V+L+G C + +L E A G LH L G++ + PV
Sbjct: 63 IMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKR-----EEIPV---SNVA 113
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
++ + G++YL EK + +HRD+ + NVL+ + AKI+DF LS +A ++
Sbjct: 114 ELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLS-KALGADDSYYTA 169
Query: 121 RVLGTF--GYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
R G + ++APE + +++SDV+S+GV + E L+ G+KP
Sbjct: 170 RSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKP 213
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 74/157 (47%), Gaps = 8/157 (5%)
Query: 6 KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVL-----SWQQRV 60
+HEN V LLG C G ++ E+ G L + L + V P + S + +
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLL 167
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+ A+G+ +L A + IHRD+ + NVL+ + VAKI DF L+ + + +
Sbjct: 168 HFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKG 224
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT 157
+ APE +SDV+S+G++L E+ +
Sbjct: 225 NARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 101/243 (41%), Gaps = 39/243 (16%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ + +H N ++L G + ++ EF NG+L L G + Q V
Sbjct: 70 IMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQ--------FTVIQLV 121
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+ G A G+ YL E + +HRD+ + N+L+ + V K++DF LS + ++ T
Sbjct: 122 GMLRGIASGMRYLAEMS---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTET 178
Query: 121 RVLG---TFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKPVDHTLPRGQQSLVTW 176
LG + APE + + SD +S+G+V+ E+++ G +P W
Sbjct: 179 SSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPY-------------W 225
Query: 177 ATPKLSEDKVRQCVDARLGGDY----PPXXXXXXXXXXXLCVQYEADFRPNMSIVVKALQ 232
D Q V + DY PP C Q + + RP VV AL
Sbjct: 226 -------DMSNQDVINAIEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALD 278
Query: 233 PLL 235
++
Sbjct: 279 KMI 281
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 78/159 (49%), Gaps = 10/159 (6%)
Query: 6 KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRK--GVKGA-----QPGPVLSWQQ 58
+HEN V LLG C G ++ E+ G L + L ++ G++ + P LS +
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRD 167
Query: 59 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLH 118
+ + A+G+ +L A + IHRD+ + NVL+ + VAKI DF L+ + + +
Sbjct: 168 LLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 224
Query: 119 STRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT 157
+ APE +SDV+S+G++L E+ +
Sbjct: 225 KGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 55/101 (54%), Gaps = 6/101 (5%)
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
K+++ KGL YL EK I+HRD+K SN+L+ K+ DF +S Q D A
Sbjct: 111 KVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMA----N 164
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
+GT Y +PE + +SD++S G+ L+E+ GR P
Sbjct: 165 EFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 205
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 89/223 (39%), Gaps = 19/223 (8%)
Query: 11 VQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPG-PVLSWQQRVKIAVGAAKG 69
V+LLG G ++ E ++G L L + PG P + Q+ +++A A G
Sbjct: 82 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 141
Query: 70 LEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYH 129
+ YL+ K +HRD+ + N ++ D KI DF ++ + + L +
Sbjct: 142 MAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 198
Query: 130 APEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQC 189
APE G SD++SFGVVL E+ SL LS ++V +
Sbjct: 199 APESLKDGVFTTSSDMWSFGVVLWEI---------------TSLAEQPYQGLSNEQVLKF 243
Query: 190 VDARLGGDYPPXXXXXXXXXXXLCVQYEADFRPNMSIVVKALQ 232
V D P +C Q+ RP +V L+
Sbjct: 244 VMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 286
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 76/161 (47%), Gaps = 16/161 (9%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLA--YEFASNGSLHDILHGRKGVKGAQPGPVLSWQQ 58
++ L+H+N V+ G C R L E+ GSL D L K + +L +
Sbjct: 64 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTS 121
Query: 59 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLH 118
++ KG+EYL K IHRD+ + N+L+ +++ KI DF L+ P
Sbjct: 122 QI------CKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEFF 171
Query: 119 STRVLGT--FGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT 157
+ G ++APE + + SDV+SFGVVL EL T
Sbjct: 172 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 89/223 (39%), Gaps = 19/223 (8%)
Query: 11 VQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPG-PVLSWQQRVKIAVGAAKG 69
V+LLG G ++ E ++G L L + PG P + Q+ +++A A G
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 70 LEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYH 129
+ YL+ K +HRD+ + N ++ D KI DF ++ + + L +
Sbjct: 143 MAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 199
Query: 130 APEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQC 189
APE G SD++SFGVVL E+ SL LS ++V +
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEI---------------TSLAEQPYQGLSNEQVLKF 244
Query: 190 VDARLGGDYPPXXXXXXXXXXXLCVQYEADFRPNMSIVVKALQ 232
V D P +C Q+ RP +V L+
Sbjct: 245 VMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 287
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 101/243 (41%), Gaps = 39/243 (16%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ + +H N ++L G + ++ EF NG+L L G + Q V
Sbjct: 68 IMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQ--------FTVIQLV 119
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+ G A G+ YL E + +HRD+ + N+L+ + V K++DF LS + ++ T
Sbjct: 120 GMLRGIASGMRYLAEMS---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYT 176
Query: 121 RVLG---TFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKPVDHTLPRGQQSLVTW 176
LG + APE + + SD +S+G+V+ E+++ G +P W
Sbjct: 177 SSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPY-------------W 223
Query: 177 ATPKLSEDKVRQCVDARLGGDY----PPXXXXXXXXXXXLCVQYEADFRPNMSIVVKALQ 232
D Q V + DY PP C Q + + RP VV AL
Sbjct: 224 -------DMSNQDVINAIEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALD 276
Query: 233 PLL 235
++
Sbjct: 277 KMI 279
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 75/160 (46%), Gaps = 14/160 (8%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSR--VLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQ 58
++ L+H+N V+ G C R L E+ GSL D L K + +L +
Sbjct: 68 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTS 125
Query: 59 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAP-DMAARL 117
++ KG+EYL K IHRD+ + N+L+ +++ KI DF L+ P D
Sbjct: 126 QI------CKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 176
Query: 118 HSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT 157
++APE + + SDV+SFGVVL EL T
Sbjct: 177 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 73/153 (47%), Gaps = 4/153 (2%)
Query: 6 KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVK-GAQPGPVLSWQQRVKIAV 64
+HEN V LLG C G ++ E+ G L + L + + G L + + +
Sbjct: 100 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSS 159
Query: 65 GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLG 124
A+G+ +L A + IHRD+ + NVL+ + VAKI DF L+ + + +
Sbjct: 160 QVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 216
Query: 125 TFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT 157
+ APE +SDV+S+G++L E+ +
Sbjct: 217 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 75/160 (46%), Gaps = 14/160 (8%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLA--YEFASNGSLHDILHGRKGVKGAQPGPVLSWQQ 58
++ L+H+N V+ G C R L E+ GSL D L K + +L +
Sbjct: 64 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTS 121
Query: 59 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAP-DMAARL 117
++ KG+EYL K IHRD+ + N+L+ +++ KI DF L+ P D
Sbjct: 122 QI------CKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 172
Query: 118 HSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT 157
++APE + + SDV+SFGVVL EL T
Sbjct: 173 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 75/160 (46%), Gaps = 14/160 (8%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLA--YEFASNGSLHDILHGRKGVKGAQPGPVLSWQQ 58
++ L+H+N V+ G C R L E+ GSL D L K + +L +
Sbjct: 64 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTS 121
Query: 59 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAP-DMAARL 117
++ KG+EYL K IHRD+ + N+L+ +++ KI DF L+ P D
Sbjct: 122 QI------CKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 172
Query: 118 HSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT 157
++APE + + SDV+SFGVVL EL T
Sbjct: 173 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 75/160 (46%), Gaps = 14/160 (8%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLA--YEFASNGSLHDILHGRKGVKGAQPGPVLSWQQ 58
++ L+H+N V+ G C R L E+ GSL D L K + +L +
Sbjct: 62 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTS 119
Query: 59 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAP-DMAARL 117
++ KG+EYL K IHRD+ + N+L+ +++ KI DF L+ P D
Sbjct: 120 QI------CKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 170
Query: 118 HSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT 157
++APE + + SDV+SFGVVL EL T
Sbjct: 171 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 75/160 (46%), Gaps = 14/160 (8%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLA--YEFASNGSLHDILHGRKGVKGAQPGPVLSWQQ 58
++ L+H+N V+ G C R L E+ GSL D L K + +L +
Sbjct: 63 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTS 120
Query: 59 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAP-DMAARL 117
++ KG+EYL K IHRD+ + N+L+ +++ KI DF L+ P D
Sbjct: 121 QI------CKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 171
Query: 118 HSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT 157
++APE + + SDV+SFGVVL EL T
Sbjct: 172 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 75/160 (46%), Gaps = 14/160 (8%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLA--YEFASNGSLHDILHGRKGVKGAQPGPVLSWQQ 58
++ L+H+N V+ G C R L E+ GSL D L K + +L +
Sbjct: 67 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTS 124
Query: 59 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAP-DMAARL 117
++ KG+EYL K IHRD+ + N+L+ +++ KI DF L+ P D
Sbjct: 125 QI------CKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 175
Query: 118 HSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT 157
++APE + + SDV+SFGVVL EL T
Sbjct: 176 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 105/244 (43%), Gaps = 34/244 (13%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ + H N ++L G ++ E+ NGSL L AQ + Q V
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD----AQFTVI----QLV 150
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+ G A G++YL +D +HRD+ + N+LI + V K++DF LS D ++T
Sbjct: 151 GMLRGIASGMKYL---SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 207
Query: 121 RVLGT-FGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKPVDHTLPRGQQSLVTWAT 178
R + +PE + + SDV+S+G+VL E+++ G +P W
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY-------------W-- 252
Query: 179 PKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXXL--CVQYEADFRPNMSIVVKALQPLLN 236
++S V + VD G PP + C Q + + RP +V L L+
Sbjct: 253 -EMSNQDVIKAVDE--GYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 309
Query: 237 ARPG 240
PG
Sbjct: 310 -NPG 312
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 73/153 (47%), Gaps = 4/153 (2%)
Query: 6 KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVK-GAQPGPVLSWQQRVKIAV 64
+HEN V LLG C G ++ E+ G L + L + + G L + + +
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSS 167
Query: 65 GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLG 124
A+G+ +L A + IHRD+ + NVL+ + VAKI DF L+ + + +
Sbjct: 168 QVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 224
Query: 125 TFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT 157
+ APE +SDV+S+G++L E+ +
Sbjct: 225 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 75/160 (46%), Gaps = 14/160 (8%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLA--YEFASNGSLHDILHGRKGVKGAQPGPVLSWQQ 58
++ L+H+N V+ G C R L E+ GSL D L K + +L +
Sbjct: 69 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTS 126
Query: 59 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAP-DMAARL 117
++ KG+EYL K IHRD+ + N+L+ +++ KI DF L+ P D
Sbjct: 127 QI------CKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 177
Query: 118 HSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT 157
++APE + + SDV+SFGVVL EL T
Sbjct: 178 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 75/160 (46%), Gaps = 14/160 (8%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLA--YEFASNGSLHDILHGRKGVKGAQPGPVLSWQQ 58
++ L+H+N V+ G C R L E+ GSL D L K + +L +
Sbjct: 71 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTS 128
Query: 59 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAP-DMAARL 117
++ KG+EYL K IHRD+ + N+L+ +++ KI DF L+ P D
Sbjct: 129 QI------CKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 179
Query: 118 HSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT 157
++APE + + SDV+SFGVVL EL T
Sbjct: 180 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 75/160 (46%), Gaps = 14/160 (8%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLA--YEFASNGSLHDILHGRKGVKGAQPGPVLSWQQ 58
++ L+H+N V+ G C R L E+ GSL D L K + +L +
Sbjct: 82 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTS 139
Query: 59 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAP-DMAARL 117
++ KG+EYL K IHRD+ + N+L+ +++ KI DF L+ P D
Sbjct: 140 QI------CKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 190
Query: 118 HSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT 157
++APE + + SDV+SFGVVL EL T
Sbjct: 191 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 75/160 (46%), Gaps = 14/160 (8%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLA--YEFASNGSLHDILHGRKGVKGAQPGPVLSWQQ 58
++ L+H+N V+ G C R L E+ GSL D L K + +L +
Sbjct: 95 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTS 152
Query: 59 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAP-DMAARL 117
++ KG+EYL K IHRD+ + N+L+ +++ KI DF L+ P D
Sbjct: 153 QI------CKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 203
Query: 118 HSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT 157
++APE + + SDV+SFGVVL EL T
Sbjct: 204 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 87/197 (44%), Gaps = 27/197 (13%)
Query: 6 KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVG 65
K+ N V L + G + E+ + GSL D++ +G Q +
Sbjct: 75 KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEG----------QIAAVCRE 124
Query: 66 AAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQ-APDMAARLHSTRVLG 124
+ LE+LH +IHRDIKS N+L+ D K+ DF Q P+ + R + ++G
Sbjct: 125 CLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR---SEMVG 178
Query: 125 TFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLP-RGQQSLVTWATPKLSE 183
T + APE K D++S G++ +E++ G P + P R + T TP+L
Sbjct: 179 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQN 238
Query: 184 ---------DKVRQCVD 191
D + +C+D
Sbjct: 239 PEKLSAIFRDFLNRCLD 255
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 75/160 (46%), Gaps = 14/160 (8%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLA--YEFASNGSLHDILHGRKGVKGAQPGPVLSWQQ 58
++ L+H+N V+ G C R L E+ GSL D L K + +L +
Sbjct: 70 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTS 127
Query: 59 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAP-DMAARL 117
++ KG+EYL K IHRD+ + N+L+ +++ KI DF L+ P D
Sbjct: 128 QI------CKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 178
Query: 118 HSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT 157
++APE + + SDV+SFGVVL EL T
Sbjct: 179 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 82/164 (50%), Gaps = 13/164 (7%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
+++ + H + V+LLG C+ T + L + +G L + +H K G+Q +L+W
Sbjct: 93 IMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQL--LLNW---- 145
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
V AKG+ YL E+ ++HRD+ + NVL+ + KI DF L+ ++
Sbjct: 146 --CVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNAD 200
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKPVD 163
+ A E + +SDV+S+GV + EL+T G KP D
Sbjct: 201 GGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYD 244
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 75/160 (46%), Gaps = 14/160 (8%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLA--YEFASNGSLHDILHGRKGVKGAQPGPVLSWQQ 58
++ L+H+N V+ G C R L EF GSL + L K + +L +
Sbjct: 67 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHK--ERIDHIKLLQYTS 124
Query: 59 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAP-DMAARL 117
++ KG+EYL K IHRD+ + N+L+ +++ KI DF L+ P D
Sbjct: 125 QI------CKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 175
Query: 118 HSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT 157
++APE + + SDV+SFGVVL EL T
Sbjct: 176 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 75/160 (46%), Gaps = 14/160 (8%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLA--YEFASNGSLHDILHGRKGVKGAQPGPVLSWQQ 58
++ L+H+N V+ G C R L E+ GSL D L K + +L +
Sbjct: 82 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTS 139
Query: 59 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAP-DMAARL 117
++ KG+EYL K IHRD+ + N+L+ +++ KI DF L+ P D
Sbjct: 140 QI------CKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 190
Query: 118 HSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT 157
++APE + + SDV+SFGVVL EL T
Sbjct: 191 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 90/223 (40%), Gaps = 19/223 (8%)
Query: 11 VQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPG-PVLSWQQRVKIAVGAAKG 69
V+LLG G ++ E ++G L L + PG P + Q+ +++A A G
Sbjct: 84 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 143
Query: 70 LEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYH 129
+ YL+ K +HR++ + N ++ D KI DF ++ + + L +
Sbjct: 144 MAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 200
Query: 130 APEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQC 189
APE G SD++SFGVVL E+ SL LS ++V +
Sbjct: 201 APESLKDGVFTTSSDMWSFGVVLWEI---------------TSLAEQPYQGLSNEQVLKF 245
Query: 190 VDARLGGDYPPXXXXXXXXXXXLCVQYEADFRPNMSIVVKALQ 232
V D P +C Q+ + RP +V L+
Sbjct: 246 VMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLK 288
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 78/160 (48%), Gaps = 18/160 (11%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
+++ +KH N VQ + S + ++ G L ++ +KGV Q +L W ++
Sbjct: 76 VLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVL-FQEDQILDWFVQI 134
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS---NQAPDMAARL 117
+A L+++H D I+HRDIKS N+ + D ++ DF ++ N ++A
Sbjct: 135 CLA------LKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELA--- 182
Query: 118 HSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT 157
+GT Y +PE N KSD+++ G VL EL T
Sbjct: 183 --RACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCT 220
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 90/223 (40%), Gaps = 19/223 (8%)
Query: 11 VQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPG-PVLSWQQRVKIAVGAAKG 69
V+LLG G ++ E ++G L L + PG P + Q+ +++A A G
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 70 LEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYH 129
+ YL+ K +HR++ + N ++ D KI DF ++ + + L +
Sbjct: 143 MAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 199
Query: 130 APEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQC 189
APE G SD++SFGVVL E+ SL LS ++V +
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEI---------------TSLAEQPYQGLSNEQVLKF 244
Query: 190 VDARLGGDYPPXXXXXXXXXXXLCVQYEADFRPNMSIVVKALQ 232
V D P +C Q+ + RP +V L+
Sbjct: 245 VMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLK 287
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 88/164 (53%), Gaps = 16/164 (9%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +L + V+L+G C + +L E A G LH L G++ + PV
Sbjct: 389 IMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKR-----EEIPV---SNVA 439
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
++ + G++YL EK + +HR++ + NVL+ + AKI+DF LS +A ++
Sbjct: 440 ELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLS-KALGADDSYYTA 495
Query: 121 RVLGTF--GYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
R G + ++APE + +++SDV+S+GV + E L+ G+KP
Sbjct: 496 RSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKP 539
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 87/197 (44%), Gaps = 27/197 (13%)
Query: 6 KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVG 65
K+ N V L + G + E+ + GSL D++ +G Q +
Sbjct: 75 KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEG----------QIAAVCRE 124
Query: 66 AAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQ-APDMAARLHSTRVLG 124
+ LE+LH +IHRDIKS N+L+ D K+ DF Q P+ + R + ++G
Sbjct: 125 CLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR---STMVG 178
Query: 125 TFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLP-RGQQSLVTWATPKLSE 183
T + APE K D++S G++ +E++ G P + P R + T TP+L
Sbjct: 179 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQN 238
Query: 184 ---------DKVRQCVD 191
D + +C+D
Sbjct: 239 PEKLSAIFRDFLNRCLD 255
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 105/244 (43%), Gaps = 34/244 (13%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ + H N ++L G ++ E+ NGSL L AQ + Q V
Sbjct: 97 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD----AQFTVI----QLV 148
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+ G A G++YL +D +HRD+ + N+LI + V K++DF LS D ++T
Sbjct: 149 GMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 205
Query: 121 RVLGT-FGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKPVDHTLPRGQQSLVTWAT 178
R + +PE + + SDV+S+G+VL E+++ G +P W
Sbjct: 206 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY-------------W-- 250
Query: 179 PKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXXL--CVQYEADFRPNMSIVVKALQPLLN 236
++S V + VD G PP + C Q + + RP +V L L+
Sbjct: 251 -EMSNQDVIKAVDE--GYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 307
Query: 237 ARPG 240
PG
Sbjct: 308 -NPG 310
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 105/244 (43%), Gaps = 34/244 (13%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ + H N ++L G ++ E+ NGSL L AQ + Q V
Sbjct: 87 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD----AQFTVI----QLV 138
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+ G A G++YL +D +HRD+ + N+LI + V K++DF LS D ++T
Sbjct: 139 GMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 195
Query: 121 RVLGT-FGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKPVDHTLPRGQQSLVTWAT 178
R + +PE + + SDV+S+G+VL E+++ G +P W
Sbjct: 196 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY-------------W-- 240
Query: 179 PKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXXL--CVQYEADFRPNMSIVVKALQPLLN 236
++S V + VD G PP + C Q + + RP +V L L+
Sbjct: 241 -EMSNQDVIKAVDE--GYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 297
Query: 237 ARPG 240
PG
Sbjct: 298 -NPG 300
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 82/164 (50%), Gaps = 13/164 (7%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
+++ + H + V+LLG C+ T + L + +G L + +H K G+Q +L+W
Sbjct: 70 IMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQL--LLNW---- 122
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
V AKG+ YL E+ ++HRD+ + NVL+ + KI DF L+ ++
Sbjct: 123 --CVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNAD 177
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKPVD 163
+ A E + +SDV+S+GV + EL+T G KP D
Sbjct: 178 GGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYD 221
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 105/244 (43%), Gaps = 34/244 (13%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ + H N ++L G ++ E+ NGSL L AQ + Q V
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD----AQFTVI----QLV 150
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+ G A G++YL +D +HRD+ + N+LI + V K++DF LS D ++T
Sbjct: 151 GMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 207
Query: 121 RVLGT-FGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKPVDHTLPRGQQSLVTWAT 178
R + +PE + + SDV+S+G+VL E+++ G +P W
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY-------------W-- 252
Query: 179 PKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXXL--CVQYEADFRPNMSIVVKALQPLLN 236
++S V + VD G PP + C Q + + RP +V L L+
Sbjct: 253 -EMSNQDVIKAVDE--GYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 309
Query: 237 ARPG 240
PG
Sbjct: 310 -NPG 312
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 105/244 (43%), Gaps = 34/244 (13%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ + H N ++L G ++ E+ NGSL L AQ + Q V
Sbjct: 70 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD----AQFTVI----QLV 121
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+ G A G++YL +D +HRD+ + N+LI + V K++DF LS D ++T
Sbjct: 122 GMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 178
Query: 121 RVLGT-FGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKPVDHTLPRGQQSLVTWAT 178
R + +PE + + SDV+S+G+VL E+++ G +P W
Sbjct: 179 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY-------------W-- 223
Query: 179 PKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXXL--CVQYEADFRPNMSIVVKALQPLLN 236
++S V + VD G PP + C Q + + RP +V L L+
Sbjct: 224 -EMSNQDVIKAVDE--GYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 280
Query: 237 ARPG 240
PG
Sbjct: 281 -NPG 283
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 105/244 (43%), Gaps = 34/244 (13%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ + H N ++L G ++ E+ NGSL L AQ + Q V
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD----AQFTVI----QLV 150
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+ G A G++YL +D +HRD+ + N+LI + V K++DF LS D ++T
Sbjct: 151 GMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 207
Query: 121 RVLGT-FGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKPVDHTLPRGQQSLVTWAT 178
R + +PE + + SDV+S+G+VL E+++ G +P W
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY-------------W-- 252
Query: 179 PKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXXL--CVQYEADFRPNMSIVVKALQPLLN 236
++S V + VD G PP + C Q + + RP +V L L+
Sbjct: 253 -EMSNQDVIKAVDE--GYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 309
Query: 237 ARPG 240
PG
Sbjct: 310 -NPG 312
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 105/244 (43%), Gaps = 34/244 (13%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ + H N ++L G ++ E+ NGSL L AQ + Q V
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD----AQFTVI----QLV 150
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+ G A G++YL +D +HRD+ + N+LI + V K++DF LS D ++T
Sbjct: 151 GMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 207
Query: 121 RVLGT-FGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKPVDHTLPRGQQSLVTWAT 178
R + +PE + + SDV+S+G+VL E+++ G +P W
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY-------------W-- 252
Query: 179 PKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXXL--CVQYEADFRPNMSIVVKALQPLLN 236
++S V + VD G PP + C Q + + RP +V L L+
Sbjct: 253 -EMSNQDVIKAVDE--GYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 309
Query: 237 ARPG 240
PG
Sbjct: 310 -NPG 312
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 76/161 (47%), Gaps = 13/161 (8%)
Query: 5 LKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAV 64
L HEN V+ G+ +G + L E+ S G L D + G+ P P QR +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM----PEPD---AQRFFHQL 113
Query: 65 GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLG 124
A G+ YLH I HRDIK N+L+ + D KI+DF L+ ++ G
Sbjct: 114 MA--GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG 168
Query: 125 TFGYHAPEYAMTGQLNAKS-DVYSFGVVLLELLTGRKPVDH 164
T Y APE + +A+ DV+S G+VL +L G P D
Sbjct: 169 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 105/244 (43%), Gaps = 34/244 (13%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ + H N ++L G ++ E+ NGSL L AQ + Q V
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD----AQFTVI----QLV 150
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+ G A G++YL +D +HRD+ + N+LI + V K++DF LS D ++T
Sbjct: 151 GMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 207
Query: 121 RVLGT-FGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKPVDHTLPRGQQSLVTWAT 178
R + +PE + + SDV+S+G+VL E+++ G +P W
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY-------------W-- 252
Query: 179 PKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXXL--CVQYEADFRPNMSIVVKALQPLLN 236
++S V + VD G PP + C Q + + RP +V L L+
Sbjct: 253 -EMSNQDVIKAVDE--GYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 309
Query: 237 ARPG 240
PG
Sbjct: 310 -NPG 312
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 76/161 (47%), Gaps = 13/161 (8%)
Query: 5 LKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAV 64
L HEN V+ G+ +G + L E+ S G L D + G+ P P QR +
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM----PEPD---AQRFFHQL 114
Query: 65 GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLG 124
A G+ YLH I HRDIK N+L+ + D KI+DF L+ ++ G
Sbjct: 115 MA--GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG 169
Query: 125 TFGYHAPEYAMTGQLNAKS-DVYSFGVVLLELLTGRKPVDH 164
T Y APE + +A+ DV+S G+VL +L G P D
Sbjct: 170 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 76/161 (47%), Gaps = 13/161 (8%)
Query: 5 LKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAV 64
L HEN V+ G+ +G + L E+ S G L D + G+ P P QR +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM----PEPD---AQRFFHQL 113
Query: 65 GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLG 124
A G+ YLH I HRDIK N+L+ + D KI+DF L+ ++ G
Sbjct: 114 MA--GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG 168
Query: 125 TFGYHAPEYAMTGQLNAKS-DVYSFGVVLLELLTGRKPVDH 164
T Y APE + +A+ DV+S G+VL +L G P D
Sbjct: 169 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 76/161 (47%), Gaps = 13/161 (8%)
Query: 5 LKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAV 64
L HEN V+ G+ +G + L E+ S G L D + G+ P P QR +
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM----PEPD---AQRFFHQL 114
Query: 65 GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLG 124
A G+ YLH I HRDIK N+L+ + D KI+DF L+ ++ G
Sbjct: 115 MA--GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG 169
Query: 125 TFGYHAPEYAMTGQLNAKS-DVYSFGVVLLELLTGRKPVDH 164
T Y APE + +A+ DV+S G+VL +L G P D
Sbjct: 170 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 81/178 (45%), Gaps = 18/178 (10%)
Query: 6 KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVG 65
K+ N V L + G + E+ + GSL D++ +G Q +
Sbjct: 75 KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEG----------QIAAVCRE 124
Query: 66 AAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQ-APDMAARLHSTRVLG 124
+ LE+LH +IHRDIKS N+L+ D K+ DF Q P+ + R + ++G
Sbjct: 125 CLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR---SXMVG 178
Query: 125 TFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLP-RGQQSLVTWATPKL 181
T + APE K D++S G++ +E++ G P + P R + T TP+L
Sbjct: 179 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPEL 236
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 76/161 (47%), Gaps = 13/161 (8%)
Query: 5 LKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAV 64
L HEN V+ G+ +G + L E+ S G L D + G+ P P QR +
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM----PEPD---AQRFFHQL 114
Query: 65 GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLG 124
A G+ YLH I HRDIK N+L+ + D KI+DF L+ ++ G
Sbjct: 115 MA--GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG 169
Query: 125 TFGYHAPEYAMTGQLNAKS-DVYSFGVVLLELLTGRKPVDH 164
T Y APE + +A+ DV+S G+VL +L G P D
Sbjct: 170 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 76/161 (47%), Gaps = 13/161 (8%)
Query: 5 LKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAV 64
L HEN V+ G+ +G + L E+ S G L D + G+ P P QR +
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM----PEPD---AQRFFHQL 114
Query: 65 GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLG 124
A G+ YLH I HRDIK N+L+ + D KI+DF L+ ++ G
Sbjct: 115 MA--GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG 169
Query: 125 TFGYHAPEYAMTGQLNAKS-DVYSFGVVLLELLTGRKPVDH 164
T Y APE + +A+ DV+S G+VL +L G P D
Sbjct: 170 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 76/161 (47%), Gaps = 13/161 (8%)
Query: 5 LKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAV 64
L HEN V+ G+ +G + L E+ S G L D + G+ P P QR +
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM----PEPD---AQRFFHQL 114
Query: 65 GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLG 124
A G+ YLH I HRDIK N+L+ + D KI+DF L+ ++ G
Sbjct: 115 MA--GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG 169
Query: 125 TFGYHAPEYAMTGQLNAKS-DVYSFGVVLLELLTGRKPVDH 164
T Y APE + +A+ DV+S G+VL +L G P D
Sbjct: 170 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 76/161 (47%), Gaps = 13/161 (8%)
Query: 5 LKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAV 64
L HEN V+ G+ +G + L E+ S G L D + G+ P P QR +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM----PEPD---AQRFFHQL 113
Query: 65 GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLG 124
A G+ YLH I HRDIK N+L+ + D KI+DF L+ ++ G
Sbjct: 114 MA--GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG 168
Query: 125 TFGYHAPEYAMTGQLNAKS-DVYSFGVVLLELLTGRKPVDH 164
T Y APE + +A+ DV+S G+VL +L G P D
Sbjct: 169 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 81/178 (45%), Gaps = 18/178 (10%)
Query: 6 KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVG 65
K+ N V L + G + E+ + GSL D++ +G Q +
Sbjct: 76 KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEG----------QIAAVCRE 125
Query: 66 AAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQ-APDMAARLHSTRVLG 124
+ LE+LH +IHRDIKS N+L+ D K+ DF Q P+ + R + ++G
Sbjct: 126 CLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR---SXMVG 179
Query: 125 TFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLP-RGQQSLVTWATPKL 181
T + APE K D++S G++ +E++ G P + P R + T TP+L
Sbjct: 180 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPEL 237
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 76/161 (47%), Gaps = 13/161 (8%)
Query: 5 LKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAV 64
L HEN V+ G+ +G + L E+ S G L D + G+ P P QR +
Sbjct: 60 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM----PEPD---AQRFFHQL 112
Query: 65 GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLG 124
A G+ YLH I HRDIK N+L+ + D KI+DF L+ ++ G
Sbjct: 113 MA--GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG 167
Query: 125 TFGYHAPEYAMTGQLNAKS-DVYSFGVVLLELLTGRKPVDH 164
T Y APE + +A+ DV+S G+VL +L G P D
Sbjct: 168 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 208
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 76/161 (47%), Gaps = 13/161 (8%)
Query: 5 LKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAV 64
L HEN V+ G+ +G + L E+ S G L D + G+ P P QR +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM----PEPD---AQRFFHQL 113
Query: 65 GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLG 124
A G+ YLH I HRDIK N+L+ + D KI+DF L+ ++ G
Sbjct: 114 MA--GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG 168
Query: 125 TFGYHAPEYAMTGQLNAKS-DVYSFGVVLLELLTGRKPVDH 164
T Y APE + +A+ DV+S G+VL +L G P D
Sbjct: 169 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 76/161 (47%), Gaps = 13/161 (8%)
Query: 5 LKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAV 64
L HEN V+ G+ +G + L E+ S G L D + G+ P P QR +
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM----PEPD---AQRFFHQL 114
Query: 65 GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLG 124
A G+ YLH I HRDIK N+L+ + D KI+DF L+ ++ G
Sbjct: 115 MA--GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG 169
Query: 125 TFGYHAPEYAMTGQLNAKS-DVYSFGVVLLELLTGRKPVDH 164
T Y APE + +A+ DV+S G+VL +L G P D
Sbjct: 170 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 64/132 (48%), Gaps = 13/132 (9%)
Query: 25 LAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHR 84
+ EF G+L + R+G K + + ++Q KG++Y+H K +IHR
Sbjct: 111 IQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQ-------ITKGVDYIHSKK---LIHR 160
Query: 85 DIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSD 144
D+K SN+ + D KI DF L + R TR GT Y +PE + + D
Sbjct: 161 DLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKR---TRSKGTLRYMSPEQISSQDYGKEVD 217
Query: 145 VYSFGVVLLELL 156
+Y+ G++L ELL
Sbjct: 218 LYALGLILAELL 229
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 76/161 (47%), Gaps = 13/161 (8%)
Query: 5 LKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAV 64
L HEN V+ G+ +G + L E+ S G L D + G+ P P QR +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM----PEPD---AQRFFHQL 113
Query: 65 GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLG 124
A G+ YLH I HRDIK N+L+ + D KI+DF L+ ++ G
Sbjct: 114 MA--GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG 168
Query: 125 TFGYHAPEYAMTGQLNAKS-DVYSFGVVLLELLTGRKPVDH 164
T Y APE + +A+ DV+S G+VL +L G P D
Sbjct: 169 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 76/161 (47%), Gaps = 13/161 (8%)
Query: 5 LKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAV 64
L HEN V+ G+ +G + L E+ S G L D + G+ P P QR +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM----PEPD---AQRFFHQL 113
Query: 65 GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLG 124
A G+ YLH I HRDIK N+L+ + D KI+DF L+ ++ G
Sbjct: 114 MA--GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG 168
Query: 125 TFGYHAPEYAMTGQLNAKS-DVYSFGVVLLELLTGRKPVDH 164
T Y APE + +A+ DV+S G+VL +L G P D
Sbjct: 169 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 77/161 (47%), Gaps = 16/161 (9%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLA--YEFASNGSLHDILHGRKGVKGAQPGPVLSWQQ 58
++ L+H+N V+ G C R L E+ GSL D L K + +L +
Sbjct: 65 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTS 122
Query: 59 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLH 118
++ KG+EYL K IHR++ + N+L+ +++ KI DF L+ P +
Sbjct: 123 QI------CKGMEYLGTK---RYIHRNLATRNILVENENRVKIGDFGLTKVLPQ-DKEYY 172
Query: 119 STRVLGT--FGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT 157
+ G ++APE + + SDV+SFGVVL EL T
Sbjct: 173 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 76/161 (47%), Gaps = 13/161 (8%)
Query: 5 LKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAV 64
L HEN V+ G+ +G + L E+ S G L D + G+ P P QR +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM----PEPD---AQRFFHQL 113
Query: 65 GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLG 124
A G+ YLH I HRDIK N+L+ + D KI+DF L+ ++ G
Sbjct: 114 MA--GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG 168
Query: 125 TFGYHAPEYAMTGQLNAKS-DVYSFGVVLLELLTGRKPVDH 164
T Y APE + +A+ DV+S G+VL +L G P D
Sbjct: 169 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 76/161 (47%), Gaps = 13/161 (8%)
Query: 5 LKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAV 64
L HEN V+ G+ +G + L E+ S G L D + G+ P P QR +
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM----PEPD---AQRFFHQL 114
Query: 65 GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLG 124
A G+ YLH I HRDIK N+L+ + D KI+DF L+ ++ G
Sbjct: 115 MA--GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG 169
Query: 125 TFGYHAPEYAMTGQLNAKS-DVYSFGVVLLELLTGRKPVDH 164
T Y APE + +A+ DV+S G+VL +L G P D
Sbjct: 170 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 76/161 (47%), Gaps = 13/161 (8%)
Query: 5 LKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAV 64
L HEN V+ G+ +G + L E+ S G L D + G+ P P QR +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM----PEPD---AQRFFHQL 113
Query: 65 GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLG 124
A G+ YLH I HRDIK N+L+ + D KI+DF L+ ++ G
Sbjct: 114 MA--GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG 168
Query: 125 TFGYHAPEYAMTGQLNAKS-DVYSFGVVLLELLTGRKPVDH 164
T Y APE + +A+ DV+S G+VL +L G P D
Sbjct: 169 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 76/161 (47%), Gaps = 13/161 (8%)
Query: 5 LKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAV 64
L HEN V+ G+ +G + L E+ S G L D + G+ P P QR +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM----PEPD---AQRFFHQL 113
Query: 65 GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLG 124
A G+ YLH I HRDIK N+L+ + D KI+DF L+ ++ G
Sbjct: 114 MA--GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXG 168
Query: 125 TFGYHAPEYAMTGQLNAKS-DVYSFGVVLLELLTGRKPVDH 164
T Y APE + +A+ DV+S G+VL +L G P D
Sbjct: 169 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 76/161 (47%), Gaps = 13/161 (8%)
Query: 5 LKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAV 64
L HEN V+ G+ +G + L E+ S G L D + G+ P P QR +
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM----PEPD---AQRFFHQL 114
Query: 65 GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLG 124
A G+ YLH I HRDIK N+L+ + D KI+DF L+ ++ G
Sbjct: 115 MA--GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXG 169
Query: 125 TFGYHAPEYAMTGQLNAKS-DVYSFGVVLLELLTGRKPVDH 164
T Y APE + +A+ DV+S G+VL +L G P D
Sbjct: 170 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 76/161 (47%), Gaps = 13/161 (8%)
Query: 5 LKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAV 64
L HEN V+ G+ +G + L E+ S G L D + G+ P P QR +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM----PEPD---AQRFFHQL 113
Query: 65 GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLG 124
A G+ YLH I HRDIK N+L+ + D KI+DF L+ ++ G
Sbjct: 114 MA--GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXG 168
Query: 125 TFGYHAPEYAMTGQLNAKS-DVYSFGVVLLELLTGRKPVDH 164
T Y APE + +A+ DV+S G+VL +L G P D
Sbjct: 169 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 76/161 (47%), Gaps = 13/161 (8%)
Query: 5 LKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAV 64
L HEN V+ G+ +G + L E+ S G L D + G+ P P QR +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM----PEPD---AQRFFHQL 113
Query: 65 GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLG 124
A G+ YLH I HRDIK N+L+ + D KI+DF L+ ++ G
Sbjct: 114 MA--GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXG 168
Query: 125 TFGYHAPEYAMTGQLNAKS-DVYSFGVVLLELLTGRKPVDH 164
T Y APE + +A+ DV+S G+VL +L G P D
Sbjct: 169 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 78/163 (47%), Gaps = 13/163 (7%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ + H N + L G ++ E+ NGSL L G + Q V
Sbjct: 76 IMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQ--------FTVIQLV 127
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+ G + G++YL +D +HRD+ + N+LI + V K++DF LS D ++T
Sbjct: 128 GMLRGISAGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 184
Query: 121 RVLGT-FGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
R + APE + + SDV+S+G+V+ E+++ G +P
Sbjct: 185 RGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERP 227
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 76/161 (47%), Gaps = 13/161 (8%)
Query: 5 LKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAV 64
L HEN V+ G+ +G + L E+ S G L D + G+ P P QR +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM----PEPD---AQRFFHQL 113
Query: 65 GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLG 124
A G+ YLH I HRDIK N+L+ + D KI+DF L+ ++ G
Sbjct: 114 MA--GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXG 168
Query: 125 TFGYHAPEYAMTGQLNAKS-DVYSFGVVLLELLTGRKPVDH 164
T Y APE + +A+ DV+S G+VL +L G P D
Sbjct: 169 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 74/160 (46%), Gaps = 14/160 (8%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLA--YEFASNGSLHDILHGRKGVKGAQPGPVLSWQQ 58
++ L+H+N V+ G C R L E+ GSL D L + +L +
Sbjct: 67 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAH--AERIDHIKLLQYTS 124
Query: 59 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAP-DMAARL 117
++ KG+EYL K IHRD+ + N+L+ +++ KI DF L+ P D
Sbjct: 125 QI------CKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 175
Query: 118 HSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT 157
++APE + + SDV+SFGVVL EL T
Sbjct: 176 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 71/147 (48%), Gaps = 15/147 (10%)
Query: 15 GYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLH 74
G + G+ + E+ GS D+L GP +Q + KGL+YLH
Sbjct: 88 GSYLKGSKLWIIMEYLGGGSALDLLRA---------GPFDEFQIATMLK-EILKGLDYLH 137
Query: 75 EKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYA 134
+ IHRDIK++NVL+ + K+ADF ++ Q D ++ +GT + APE
Sbjct: 138 SEKK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTD--TQIKRNTFVGTPFWMAPEVI 192
Query: 135 MTGQLNAKSDVYSFGVVLLELLTGRKP 161
++K+D++S G+ +EL G P
Sbjct: 193 QQSAYDSKADIWSLGITAIELAKGEPP 219
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 85/164 (51%), Gaps = 17/164 (10%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +L + V+++G C + S +L E A G L+ L + VK + +
Sbjct: 81 VMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---------KNII 130
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
++ + G++YL E + +HRD+ + NVL+ AKI+DF LS +A +
Sbjct: 131 ELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLS-KALRADENYYKA 186
Query: 121 RVLGTF--GYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
+ G + ++APE + ++KSDV+SFGV++ E + G+KP
Sbjct: 187 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 85/164 (51%), Gaps = 17/164 (10%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +L + V+++G C + S +L E A G L+ L + VK + +
Sbjct: 81 VMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---------KNII 130
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
++ + G++YL E + +HRD+ + NVL+ AKI+DF LS +A +
Sbjct: 131 ELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLS-KALRADENYYKA 186
Query: 121 RVLGTF--GYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
+ G + ++APE + ++KSDV+SFGV++ E + G+KP
Sbjct: 187 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 81/162 (50%), Gaps = 20/162 (12%)
Query: 5 LKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDIL--HGRKGVKGAQPGPVLSWQQRVKI 62
L H N V+L + L E+AS G + D L HGR K A+ ++Q V
Sbjct: 71 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA----KFRQIVS- 125
Query: 63 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRV 122
++Y H+K +I+HRD+K+ N+L+ D KIADF SN+ + +L +
Sbjct: 126 ------AVQYCHQK---YIVHRDLKAENLLLDGDMNIKIADFGFSNEFT-VGNKLDT--F 173
Query: 123 LGTFGYHAPEYAMTGQLNA-KSDVYSFGVVLLELLTGRKPVD 163
G+ Y APE + + + DV+S GV+L L++G P D
Sbjct: 174 CGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 85/164 (51%), Gaps = 17/164 (10%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +L + V+++G C + S +L E A G L+ L + VK + +
Sbjct: 79 VMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---------KNII 128
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
++ + G++YL E + +HRD+ + NVL+ AKI+DF LS +A +
Sbjct: 129 ELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLS-KALRADENYYKA 184
Query: 121 RVLGTF--GYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
+ G + ++APE + ++KSDV+SFGV++ E + G+KP
Sbjct: 185 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 228
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 71/151 (47%), Gaps = 15/151 (9%)
Query: 11 VQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGL 70
+ G + T + E+ GS D+L +PGP L I KGL
Sbjct: 80 TRYFGSYLKSTKLWIIMEYLGGGSALDLL---------KPGP-LEETYIATILREILKGL 129
Query: 71 EYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHA 130
+YLH + IHRDIK++NVL+ + K+ADF ++ Q D ++ +GT + A
Sbjct: 130 DYLHSERK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTD--TQIKRNXFVGTPFWMA 184
Query: 131 PEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
PE + K+D++S G+ +EL G P
Sbjct: 185 PEVIKQSAYDFKADIWSLGITAIELAKGEPP 215
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 74/157 (47%), Gaps = 17/157 (10%)
Query: 6 KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDIL-HGRKGVKGAQPGPVLSWQQRVKIAV 64
+HEN V++ + G + EF G+L DI+ H R ++ +Q + +
Sbjct: 206 QHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR-----------MNEEQIAAVCL 254
Query: 65 GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLG 124
+ L LH + +IHRDIKS ++L+ D K++DF Q R ++G
Sbjct: 255 AVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR--RKXLVG 309
Query: 125 TFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
T + APE + D++S G++++E++ G P
Sbjct: 310 TPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 346
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 66/161 (40%), Gaps = 16/161 (9%)
Query: 3 SRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKI 62
+ L H N ++L Y D L E+A G L+ K Q Q+ I
Sbjct: 78 AHLHHPNILRLYNYFYDRRRIYLILEYAPRGELY---------KELQKSCTFDEQRTATI 128
Query: 63 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRV 122
A L Y H K +IHRDIK N+L+ KIADF S AP L +
Sbjct: 129 MEELADALMYCHGKK---VIHRDIKPENLLLGLKGELKIADFGWSVHAPS----LRRKTM 181
Query: 123 LGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVD 163
GT Y PE N K D++ GV+ ELL G P +
Sbjct: 182 CGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFE 222
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 105/244 (43%), Gaps = 34/244 (13%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ + H N ++L G ++ E+ NGSL L AQ + Q V
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD----AQFTVI----QLV 150
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+ G A G++YL +D +HRD+ + N+LI + V K++DF L+ D ++T
Sbjct: 151 GMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTT 207
Query: 121 RVLGT-FGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKPVDHTLPRGQQSLVTWAT 178
R + +PE + + SDV+S+G+VL E+++ G +P W
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY-------------W-- 252
Query: 179 PKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXXL--CVQYEADFRPNMSIVVKALQPLLN 236
++S V + VD G PP + C Q + + RP +V L L+
Sbjct: 253 -EMSNQDVIKAVDE--GYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 309
Query: 237 ARPG 240
PG
Sbjct: 310 -NPG 312
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 76/170 (44%), Gaps = 9/170 (5%)
Query: 2 VSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVK 61
+S+ H N V V L + S GS+ DI+ KG VL
Sbjct: 62 MSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIK-HIVAKGEHKSGVLDESTIAT 120
Query: 62 IAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS---NQAPDMAARLH 118
I +GLEYLH+ IHRD+K+ N+L+ +D +IADF +S D+
Sbjct: 121 ILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKV 177
Query: 119 STRVLGTFGYHAPE-YAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLP 167
+GT + APE + K+D++SFG+ +EL TG P H P
Sbjct: 178 RKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPY-HKYP 226
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 85/164 (51%), Gaps = 17/164 (10%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +L + V+++G C + S +L E A G L+ L + VK + +
Sbjct: 71 VMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---------KNII 120
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
++ + G++YL E + +HRD+ + NVL+ AKI+DF LS +A +
Sbjct: 121 ELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLS-KALRADENYYKA 176
Query: 121 RVLGTF--GYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
+ G + ++APE + ++KSDV+SFGV++ E + G+KP
Sbjct: 177 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 220
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 85/164 (51%), Gaps = 17/164 (10%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +L + V+++G C + S +L E A G L+ L + VK + +
Sbjct: 65 VMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---------KNII 114
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
++ + G++YL E + +HRD+ + NVL+ AKI+DF LS +A +
Sbjct: 115 ELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLS-KALRADENYYKA 170
Query: 121 RVLGTF--GYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
+ G + ++APE + ++KSDV+SFGV++ E + G+KP
Sbjct: 171 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 67/132 (50%), Gaps = 13/132 (9%)
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
KIAV K LE+LH K +IHRD+K SNVLI K+ DF +S D A+ T
Sbjct: 157 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAK---T 211
Query: 121 RVLGTFGYHAPEYAMTGQLN-----AKSDVYSFGVVLLELLTGRKPVDHTLPRGQQ--SL 173
G Y APE + +LN KSD++S G+ ++EL R P D QQ +
Sbjct: 212 IDAGCKPYMAPE-RINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQV 270
Query: 174 VTWATPKLSEDK 185
V +P+L DK
Sbjct: 271 VEEPSPQLPADK 282
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 85/164 (51%), Gaps = 17/164 (10%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +L + V+++G C + S +L E A G L+ L + VK + +
Sbjct: 65 VMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---------KNII 114
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
++ + G++YL E + +HRD+ + NVL+ AKI+DF LS +A +
Sbjct: 115 ELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLS-KALRADENXYKA 170
Query: 121 RVLGTF--GYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
+ G + ++APE + ++KSDV+SFGV++ E + G+KP
Sbjct: 171 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 74/157 (47%), Gaps = 17/157 (10%)
Query: 6 KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDIL-HGRKGVKGAQPGPVLSWQQRVKIAV 64
+HEN V++ + G + EF G+L DI+ H R ++ +Q + +
Sbjct: 129 QHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR-----------MNEEQIAAVCL 177
Query: 65 GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLG 124
+ L LH + +IHRDIKS ++L+ D K++DF Q R ++G
Sbjct: 178 AVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR--RKXLVG 232
Query: 125 TFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
T + APE + D++S G++++E++ G P
Sbjct: 233 TPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 269
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 76/170 (44%), Gaps = 9/170 (5%)
Query: 2 VSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVK 61
+S+ H N V V L + S GS+ DI+ KG VL
Sbjct: 67 MSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIK-HIVAKGEHKSGVLDESTIAT 125
Query: 62 IAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS---NQAPDMAARLH 118
I +GLEYLH+ IHRD+K+ N+L+ +D +IADF +S D+
Sbjct: 126 ILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKV 182
Query: 119 STRVLGTFGYHAPE-YAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLP 167
+GT + APE + K+D++SFG+ +EL TG P H P
Sbjct: 183 RKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPY-HKYP 231
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 74/157 (47%), Gaps = 17/157 (10%)
Query: 6 KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDIL-HGRKGVKGAQPGPVLSWQQRVKIAV 64
+HEN V++ + G + EF G+L DI+ H R ++ +Q + +
Sbjct: 84 QHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR-----------MNEEQIAAVCL 132
Query: 65 GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLG 124
+ L LH + +IHRDIKS ++L+ D K++DF Q R ++G
Sbjct: 133 AVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR--RKXLVG 187
Query: 125 TFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
T + APE + D++S G++++E++ G P
Sbjct: 188 TPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 224
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 85/164 (51%), Gaps = 17/164 (10%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +L + V+++G C + S +L E A G L+ L + VK + +
Sbjct: 424 VMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---------KNII 473
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
++ + G++YL E + +HRD+ + NVL+ AKI+DF LS +A +
Sbjct: 474 ELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLS-KALRADENYYKA 529
Query: 121 RVLGTF--GYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
+ G + ++APE + ++KSDV+SFGV++ E + G+KP
Sbjct: 530 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 573
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 85/164 (51%), Gaps = 17/164 (10%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +L + V+++G C + S +L E A G L+ L + VK + +
Sbjct: 59 VMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---------KNII 108
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
++ + G++YL E + +HRD+ + NVL+ AKI+DF LS +A +
Sbjct: 109 ELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLS-KALRADENYYKA 164
Query: 121 RVLGTF--GYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
+ G + ++APE + ++KSDV+SFGV++ E + G+KP
Sbjct: 165 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 208
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 85/164 (51%), Gaps = 17/164 (10%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +L + V+++G C + S +L E A G L+ L + VK + +
Sbjct: 61 VMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---------KNII 110
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
++ + G++YL E + +HRD+ + NVL+ AKI+DF LS +A +
Sbjct: 111 ELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLS-KALRADENYYKA 166
Query: 121 RVLGTF--GYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
+ G + ++APE + ++KSDV+SFGV++ E + G+KP
Sbjct: 167 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 210
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 74/157 (47%), Gaps = 17/157 (10%)
Query: 6 KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDIL-HGRKGVKGAQPGPVLSWQQRVKIAV 64
+HEN V++ + G + EF G+L DI+ H R ++ +Q + +
Sbjct: 86 QHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR-----------MNEEQIAAVCL 134
Query: 65 GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLG 124
+ L LH + +IHRDIKS ++L+ D K++DF Q R ++G
Sbjct: 135 AVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR--RKXLVG 189
Query: 125 TFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
T + APE + D++S G++++E++ G P
Sbjct: 190 TPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 226
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 85/164 (51%), Gaps = 17/164 (10%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +L + V+++G C + S +L E A G L+ L + VK + +
Sbjct: 423 VMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---------KNII 472
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
++ + G++YL E + +HRD+ + NVL+ AKI+DF LS +A +
Sbjct: 473 ELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLS-KALRADENYYKA 528
Query: 121 RVLGTF--GYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
+ G + ++APE + ++KSDV+SFGV++ E + G+KP
Sbjct: 529 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 572
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 104/244 (42%), Gaps = 34/244 (13%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ + H N ++L G ++ E+ NGSL L AQ + Q V
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD----AQFTVI----QLV 150
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+ G A G++YL +D +HRD+ + N+LI + V K++DF L D ++T
Sbjct: 151 GMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTT 207
Query: 121 RVLGT-FGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKPVDHTLPRGQQSLVTWAT 178
R + +PE + + SDV+S+G+VL E+++ G +P W
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY-------------W-- 252
Query: 179 PKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXXL--CVQYEADFRPNMSIVVKALQPLLN 236
++S V + VD G PP + C Q + + RP +V L L+
Sbjct: 253 -EMSNQDVIKAVDE--GYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 309
Query: 237 ARPG 240
PG
Sbjct: 310 -NPG 312
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 74/157 (47%), Gaps = 17/157 (10%)
Query: 6 KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDIL-HGRKGVKGAQPGPVLSWQQRVKIAV 64
+HEN V++ + G + EF G+L DI+ H R ++ +Q + +
Sbjct: 75 QHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR-----------MNEEQIAAVCL 123
Query: 65 GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLG 124
+ L LH + +IHRDIKS ++L+ D K++DF Q R ++G
Sbjct: 124 AVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR--RKXLVG 178
Query: 125 TFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
T + APE + D++S G++++E++ G P
Sbjct: 179 TPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 215
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 104/244 (42%), Gaps = 34/244 (13%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ + H N ++L G ++ E NGSL L AQ + Q V
Sbjct: 70 IMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHD----AQFTVI----QLV 121
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+ G A G++YL +D +HRD+ + N+LI + V K++DF LS D ++T
Sbjct: 122 GMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 178
Query: 121 RVLGT-FGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKPVDHTLPRGQQSLVTWAT 178
R + +PE + + SDV+S+G+VL E+++ G +P W
Sbjct: 179 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY-------------W-- 223
Query: 179 PKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXXL--CVQYEADFRPNMSIVVKALQPLLN 236
++S V + VD G PP + C Q + + RP +V L L+
Sbjct: 224 -EMSNQDVIKAVDE--GYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 280
Query: 237 ARPG 240
PG
Sbjct: 281 -NPG 283
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 74/157 (47%), Gaps = 17/157 (10%)
Query: 6 KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDIL-HGRKGVKGAQPGPVLSWQQRVKIAV 64
+HEN V++ + G + EF G+L DI+ H R ++ +Q + +
Sbjct: 79 QHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR-----------MNEEQIAAVCL 127
Query: 65 GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLG 124
+ L LH + +IHRDIKS ++L+ D K++DF Q R ++G
Sbjct: 128 AVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR--RKXLVG 182
Query: 125 TFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
T + APE + D++S G++++E++ G P
Sbjct: 183 TPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 219
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 81/178 (45%), Gaps = 18/178 (10%)
Query: 6 KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVG 65
K+ N V L + G + E+ + GSL D++ +G Q +
Sbjct: 76 KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEG----------QIAAVCRE 125
Query: 66 AAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQ-APDMAARLHSTRVLG 124
+ LE+LH +IHR+IKS N+L+ D K+ DF Q P+ + R + ++G
Sbjct: 126 CLQALEFLHSN---QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR---STMVG 179
Query: 125 TFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLP-RGQQSLVTWATPKL 181
T + APE K D++S G++ +E++ G P + P R + T TP+L
Sbjct: 180 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPEL 237
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 80/162 (49%), Gaps = 20/162 (12%)
Query: 5 LKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDIL--HGRKGVKGAQPGPVLSWQQRVKI 62
L H N V+L + L E+AS G + D L HGR K A+ ++Q V
Sbjct: 68 LNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARS----KFRQIVS- 122
Query: 63 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRV 122
++Y H+K I+HRD+K+ N+L+ D KIADF SN+ + +L +
Sbjct: 123 ------AVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFT-VGGKLDT--F 170
Query: 123 LGTFGYHAPEYAMTGQLNA-KSDVYSFGVVLLELLTGRKPVD 163
G+ Y APE + + + DV+S GV+L L++G P D
Sbjct: 171 CGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 212
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 75/161 (46%), Gaps = 16/161 (9%)
Query: 7 HENFVQLLGYCVD-GTSRVLAYEFASNGSLHDILHGRKGVKGAQPGP------VLSWQQR 59
H N V LLG C G ++ EF G+L L ++ P L+ +
Sbjct: 91 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHL 150
Query: 60 VKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSN---QAPDMAAR 116
+ + AKG+E+L A IHRD+ + N+L+ + +V KI DF L+ + PD R
Sbjct: 151 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPD-XVR 206
Query: 117 LHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT 157
R+ + APE +SDV+SFGV+L E+ +
Sbjct: 207 KGDARL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 104/244 (42%), Gaps = 34/244 (13%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ + H N ++L G ++ E NGSL L AQ + Q V
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHD----AQFTVI----QLV 150
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+ G A G++YL +D +HRD+ + N+LI + V K++DF LS D ++T
Sbjct: 151 GMLRGIASGMKYL---SDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 207
Query: 121 RVLGT-FGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKPVDHTLPRGQQSLVTWAT 178
R + +PE + + SDV+S+G+VL E+++ G +P W
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY-------------W-- 252
Query: 179 PKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXXL--CVQYEADFRPNMSIVVKALQPLLN 236
++S V + VD G PP + C Q + + RP +V L L+
Sbjct: 253 -EMSNQDVIKAVDE--GYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 309
Query: 237 ARPG 240
PG
Sbjct: 310 -NPG 312
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 104/244 (42%), Gaps = 34/244 (13%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ + H N ++L G ++ E NGSL L AQ + Q V
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHD----AQFTVI----QLV 150
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+ G A G++YL +D +HRD+ + N+LI + V K++DF LS D ++T
Sbjct: 151 GMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 207
Query: 121 RVLGT-FGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKPVDHTLPRGQQSLVTWAT 178
R + +PE + + SDV+S+G+VL E+++ G +P W
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY-------------W-- 252
Query: 179 PKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXXL--CVQYEADFRPNMSIVVKALQPLLN 236
++S V + VD G PP + C Q + + RP +V L L+
Sbjct: 253 -EMSNQDVIKAVDE--GYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 309
Query: 237 ARPG 240
PG
Sbjct: 310 -NPG 312
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 73/156 (46%), Gaps = 17/156 (10%)
Query: 7 HENFVQLLGYCVDGTSRVLAYEFASNGSLHDIL-HGRKGVKGAQPGPVLSWQQRVKIAVG 65
H+N V + + G + EF G+L DI+ H R ++ +Q + +
Sbjct: 101 HDNVVDMYSSYLVGDELWVVMEFLEGGALTDIVTHTR-----------MNEEQIATVCLS 149
Query: 66 AAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGT 125
+ L YLH + +IHRDIKS ++L+ D K++DF Q + ++GT
Sbjct: 150 VLRALSYLHNQG---VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPK--RKXLVGT 204
Query: 126 FGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
+ APE + D++S G++++E++ G P
Sbjct: 205 PYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPP 240
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 54/105 (51%), Gaps = 9/105 (8%)
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
KI + K L +L E IIHRDIK SN+L+ K+ DF +S Q D A+ T
Sbjct: 129 KITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAK---T 183
Query: 121 RVLGTFGYHAPEY----AMTGQLNAKSDVYSFGVVLLELLTGRKP 161
R G Y APE A + +SDV+S G+ L EL TGR P
Sbjct: 184 RDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFP 228
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 75/161 (46%), Gaps = 16/161 (9%)
Query: 5 LKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAV 64
LKH+N VQ LG + + E GSL +L ++ GP+ +Q +
Sbjct: 76 LKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLR-------SKWGPLKDNEQTIGFYT 128
Query: 65 GAA-KGLEYLHEKADPHIIHRDIKSSNVLIFD-DDVAKIADFDLSNQAPDMAARLHSTRV 122
+GL+YLH D I+HRDIK NVLI V KI+DF S + + +
Sbjct: 129 KQILEGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTET--F 183
Query: 123 LGTFGYHAPEYAMTGQ--LNAKSDVYSFGVVLLELLTGRKP 161
GT Y APE G +D++S G ++E+ TG+ P
Sbjct: 184 TGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPP 224
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 77/163 (47%), Gaps = 13/163 (7%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ + H N + L G ++ E+ NGSL L G + Q V
Sbjct: 83 IMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGR--------FTVIQLV 134
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+ G G++YL +D +HRD+ + N+L+ + V K++DF +S D ++T
Sbjct: 135 GMLRGIGSGMKYL---SDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTT 191
Query: 121 RVLGT-FGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
R + APE + + SDV+S+G+V+ E+++ G +P
Sbjct: 192 RGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 234
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 79/162 (48%), Gaps = 20/162 (12%)
Query: 5 LKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDIL--HGRKGVKGAQPGPVLSWQQRVKI 62
L H N V+L + L E+AS G + D L HGR K A+ ++Q V
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA----KFRQIVS- 124
Query: 63 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRV 122
++Y H+K I+HRD+K+ N+L+ D KIADF SN+ +L +
Sbjct: 125 ------AVQYCHQK---FIVHRDLKAENLLLDADMNIKIADFGFSNEFT-FGNKLDT--F 172
Query: 123 LGTFGYHAPEYAMTGQLNA-KSDVYSFGVVLLELLTGRKPVD 163
G+ Y APE + + + DV+S GV+L L++G P D
Sbjct: 173 CGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 79/162 (48%), Gaps = 20/162 (12%)
Query: 5 LKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDIL--HGRKGVKGAQPGPVLSWQQRVKI 62
L H N V+L + L E+AS G + D L HGR K A+ ++Q V
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA----KFRQIVS- 124
Query: 63 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRV 122
++Y H+K I+HRD+K+ N+L+ D KIADF SN+ +L +
Sbjct: 125 ------AVQYCHQK---FIVHRDLKAENLLLDADMNIKIADFGFSNEFT-FGNKLDT--F 172
Query: 123 LGTFGYHAPEYAMTGQLNA-KSDVYSFGVVLLELLTGRKPVD 163
G+ Y APE + + + DV+S GV+L L++G P D
Sbjct: 173 CGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 79/162 (48%), Gaps = 20/162 (12%)
Query: 5 LKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDIL--HGRKGVKGAQPGPVLSWQQRVKI 62
L H N V+L + L E+AS G + D L HGR K A+ ++Q V
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA----KFRQIVS- 124
Query: 63 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRV 122
++Y H+K I+HRD+K+ N+L+ D KIADF SN+ +L +
Sbjct: 125 ------AVQYCHQK---FIVHRDLKAENLLLDADMNIKIADFGFSNEFT-FGNKLDT--F 172
Query: 123 LGTFGYHAPEYAMTGQLNA-KSDVYSFGVVLLELLTGRKPVD 163
G+ Y APE + + + DV+S GV+L L++G P D
Sbjct: 173 CGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 77/163 (47%), Gaps = 13/163 (7%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ + H N + L G ++ E+ NGSL L G + Q V
Sbjct: 62 IMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGR--------FTVIQLV 113
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+ G G++YL +D +HRD+ + N+L+ + V K++DF +S D ++T
Sbjct: 114 GMLRGIGSGMKYL---SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTT 170
Query: 121 RVLGT-FGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
R + APE + + SDV+S+G+V+ E+++ G +P
Sbjct: 171 RGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 213
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 77/163 (47%), Gaps = 13/163 (7%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ + H N + L G ++ E+ NGSL L G + Q V
Sbjct: 68 IMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGR--------FTVIQLV 119
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+ G G++YL +D +HRD+ + N+L+ + V K++DF +S D ++T
Sbjct: 120 GMLRGIGSGMKYL---SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTT 176
Query: 121 RVLGT-FGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
R + APE + + SDV+S+G+V+ E+++ G +P
Sbjct: 177 RGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 219
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 75/161 (46%), Gaps = 16/161 (9%)
Query: 5 LKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAV 64
LKH+N VQ LG + + E GSL +L ++ GP+ +Q +
Sbjct: 62 LKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLR-------SKWGPLKDNEQTIGFYT 114
Query: 65 GAA-KGLEYLHEKADPHIIHRDIKSSNVLIFD-DDVAKIADFDLSNQAPDMAARLHSTRV 122
+GL+YLH D I+HRDIK NVLI V KI+DF S + + +
Sbjct: 115 KQILEGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTET--F 169
Query: 123 LGTFGYHAPEYAMTGQ--LNAKSDVYSFGVVLLELLTGRKP 161
GT Y APE G +D++S G ++E+ TG+ P
Sbjct: 170 TGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPP 210
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 74/166 (44%), Gaps = 17/166 (10%)
Query: 6 KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILH-------GRKGVKGAQP-------G 51
+HEN V LLG C G ++ E+ G L + L G G P G
Sbjct: 93 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDG 152
Query: 52 PVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAP 111
L + + + A+G+ +L K + IHRD+ + NVL+ + VAKI DF L+
Sbjct: 153 RPLELRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIM 209
Query: 112 DMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT 157
+ + + + APE +SDV+S+G++L E+ +
Sbjct: 210 NDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 78/162 (48%), Gaps = 20/162 (12%)
Query: 5 LKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDIL--HGRKGVKGAQPGPVLSWQQRVKI 62
L H N V+L + L E+AS G + D L HGR K A+ ++Q V
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARA----KFRQIVS- 124
Query: 63 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRV 122
++Y H+K I+HRD+K+ N+L+ D KIADF SN+ +L +
Sbjct: 125 ------AVQYCHQK---FIVHRDLKAENLLLDADXNIKIADFGFSNEFT-FGNKLDA--F 172
Query: 123 LGTFGYHAPEYAMTGQLNA-KSDVYSFGVVLLELLTGRKPVD 163
G Y APE + + + DV+S GV+L L++G P D
Sbjct: 173 CGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 79/162 (48%), Gaps = 20/162 (12%)
Query: 5 LKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDIL--HGRKGVKGAQPGPVLSWQQRVKI 62
L H N V+L + L E+AS G + D L HGR K A+ ++Q V
Sbjct: 71 LNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARS----KFRQIVS- 125
Query: 63 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRV 122
++Y H+K I+HRD+K+ N+L+ D KIADF SN+ + +L +
Sbjct: 126 ------AVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFT-VGGKLDA--F 173
Query: 123 LGTFGYHAPEYAMTGQLNA-KSDVYSFGVVLLELLTGRKPVD 163
G Y APE + + + DV+S GV+L L++G P D
Sbjct: 174 CGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 73/140 (52%), Gaps = 8/140 (5%)
Query: 25 LAYEFASNGSLHDILHGRKG--VKGAQPGPVLSWQQRVKIAVGA-AKGLEYLHEKADPHI 81
L Y F + G L+ IL +G + V+ ++ VK + A GL++LH I
Sbjct: 95 LHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLHSLG---I 151
Query: 82 IHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNA 141
I+RD+K N+L+ ++ K+ DF LS +A D + +S GT Y APE +
Sbjct: 152 IYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYS--FCGTVEYMAPEVVNRQGHSH 209
Query: 142 KSDVYSFGVVLLELLTGRKP 161
+D +S+GV++ E+LTG P
Sbjct: 210 SADWWSYGVLMFEMLTGSLP 229
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 78/162 (48%), Gaps = 20/162 (12%)
Query: 5 LKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDIL--HGRKGVKGAQPGPVLSWQQRVKI 62
L H N V+L + L E+AS G + D L HGR K A+ ++Q V
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA----KFRQIVS- 124
Query: 63 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRV 122
++Y H+K I+HRD+K+ N+L+ D KIADF SN+ +L
Sbjct: 125 ------AVQYCHQK---FIVHRDLKAENLLLDADMNIKIADFGFSNEFT-FGNKLDE--F 172
Query: 123 LGTFGYHAPEYAMTGQLNA-KSDVYSFGVVLLELLTGRKPVD 163
G+ Y APE + + + DV+S GV+L L++G P D
Sbjct: 173 CGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 75/153 (49%), Gaps = 13/153 (8%)
Query: 12 QLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLE 71
+LLG C+ T + L + G L D + +G G+Q +L+W ++ AKG+
Sbjct: 83 RLLGICLTSTVQ-LVTQLMPYGCLLDHVRENRGRLGSQD--LLNWCMQI------AKGMS 133
Query: 72 YLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAP 131
YL D ++HRD+ + NVL+ + KI DF L+ H+ + A
Sbjct: 134 YLE---DVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMAL 190
Query: 132 EYAMTGQLNAKSDVYSFGVVLLELLT-GRKPVD 163
E + + +SDV+S+GV + EL+T G KP D
Sbjct: 191 ESILRRRFTHQSDVWSYGVTVWELMTFGAKPYD 223
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 78/162 (48%), Gaps = 20/162 (12%)
Query: 5 LKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDIL--HGRKGVKGAQPGPVLSWQQRVKI 62
L H N V+L + L E+AS G + D L HGR K A+ ++Q V
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA----KFRQIVS- 124
Query: 63 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRV 122
++Y H+K I+HRD+K+ N+L+ D KIADF SN+ +L +
Sbjct: 125 ------AVQYCHQK---FIVHRDLKAENLLLDADMNIKIADFGFSNEFT-FGNKLDA--F 172
Query: 123 LGTFGYHAPEYAMTGQLNA-KSDVYSFGVVLLELLTGRKPVD 163
G Y APE + + + DV+S GV+L L++G P D
Sbjct: 173 CGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 77/160 (48%), Gaps = 15/160 (9%)
Query: 7 HENFVQLLGYCVD-GTSRVLAYEFASNGSLHDILHGRKG-VKGAQPGPV----LSWQQRV 60
H N V LLG C G ++ EF G+L L ++ +P + L+ + +
Sbjct: 92 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLI 151
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSN---QAPDMAARL 117
+ AKG+E+L A IHRD+ + N+L+ + +V KI DF L+ + PD R
Sbjct: 152 XYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPD-XVRK 207
Query: 118 HSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT 157
R+ + APE +SDV+SFGV+L E+ +
Sbjct: 208 GDARL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 77/172 (44%), Gaps = 31/172 (18%)
Query: 2 VSRLKHENFVQLLGYCVDG-----------TSR------VLAYEFASNGSLHDILHGRKG 44
+++L H N V G C DG +SR + EF G+L + R+G
Sbjct: 58 LAKLDHVNIVHYNG-CWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRG 116
Query: 45 VKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADF 104
K + + ++Q KG++Y+H K +I+RD+K SN+ + D KI DF
Sbjct: 117 EKLDKVLALELFEQ-------ITKGVDYIHSKK---LINRDLKPSNIFLVDTKQVKIGDF 166
Query: 105 DLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELL 156
L + R S GT Y +PE + + D+Y+ G++L ELL
Sbjct: 167 GLVTSLKNDGKRXRSK---GTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 75/161 (46%), Gaps = 13/161 (8%)
Query: 4 RLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIA 63
+L H V+ G C + E+ SNG L + L R KG +P Q +++
Sbjct: 59 KLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYL--RSHGKGLEPS------QLLEMC 110
Query: 64 VGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVL 123
+G+ +L IHRD+ + N L+ D K++DF ++ D + S
Sbjct: 111 YDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLD-DQYVSSVGTK 166
Query: 124 GTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKPVD 163
+ APE + ++KSDV++FG+++ E+ + G+ P D
Sbjct: 167 FPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYD 207
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 66/132 (50%), Gaps = 13/132 (9%)
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
KIAV K LE+LH K +IHRD+K SNVLI K+ DF +S D A+
Sbjct: 113 KIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDA 170
Query: 121 RVLGTFGYHAPEYAMTGQLN-----AKSDVYSFGVVLLELLTGRKPVDHTLPRGQQ--SL 173
G Y APE + +LN KSD++S G+ ++EL R P D QQ +
Sbjct: 171 ---GCKPYMAPE-RINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQV 226
Query: 174 VTWATPKLSEDK 185
V +P+L DK
Sbjct: 227 VEEPSPQLPADK 238
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 76/162 (46%), Gaps = 17/162 (10%)
Query: 7 HENFVQLLGYCVD-GTSRVLAYEFASNGSLHDILHGRKG-VKGAQPGP------VLSWQQ 58
H N V LLG C G ++ EF G+L L ++ + P L+ +
Sbjct: 92 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEH 151
Query: 59 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSN---QAPDMAA 115
+ + AKG+E+L A IHRD+ + N+L+ + +V KI DF L+ + PD
Sbjct: 152 LICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY-V 207
Query: 116 RLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT 157
R R+ + APE +SDV+SFGV+L E+ +
Sbjct: 208 RKGDARL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 69 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 128
GL++LH K I++RD+K N+L+ D KIADF + + +M + GT Y
Sbjct: 131 GLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKE--NMLGDAKTNEFCGTPDY 185
Query: 129 HAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPV 162
APE + + N D +SFGV+L E+L G+ P
Sbjct: 186 IAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF 219
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 75/157 (47%), Gaps = 19/157 (12%)
Query: 10 FVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKG 69
VQ G + T +A E G+ + L +K ++G P +L K+ V K
Sbjct: 86 IVQCFGTFITNTDVFIAMELM--GTCAEKL--KKRMQGPIPERILG-----KMTVAIVKA 136
Query: 70 LEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYH 129
L YL EK +IHRD+K SN+L+ + K+ DF +S + D A+ R G Y
Sbjct: 137 LYYLKEKHG--VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAK---DRSAGCAAYM 191
Query: 130 APEYA-----MTGQLNAKSDVYSFGVVLLELLTGRKP 161
APE + ++DV+S G+ L+EL TG+ P
Sbjct: 192 APERIDPPDPTKPDYDIRADVWSLGISLVELATGQFP 228
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 92/227 (40%), Gaps = 27/227 (11%)
Query: 11 VQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVL---SWQQRVKIAVGAA 67
V+LLG G ++ E + G L L + + PVL S + +++A A
Sbjct: 76 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLR--PEMENNPVLAPPSLSKMIQMAGEIA 133
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 127
G+ YL+ +HRD+ + N ++ +D KI DF ++ + + L
Sbjct: 134 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 190
Query: 128 YHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVR 187
+ +PE G SDV+SFGVVL E+ T L LS ++V
Sbjct: 191 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQPYQGLSNEQVL 235
Query: 188 QCVDARLGG--DYPPXXXXXXXXXXXLCVQYEADFRPNMSIVVKALQ 232
+ V GG D P +C QY RP+ ++ +++
Sbjct: 236 RFVME--GGLLDKPDNCPDMLLELMRMCWQYNPKMRPSFLEIISSIK 280
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 71/140 (50%), Gaps = 8/140 (5%)
Query: 25 LAYEFASNGSLHDILHGRKG--VKGAQPGPVLSWQQRVKIAVGA-AKGLEYLHEKADPHI 81
L Y F + G L+ IL +G + V+ ++ VK + A L++LH I
Sbjct: 91 LHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLG---I 147
Query: 82 IHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNA 141
I+RD+K N+L+ ++ K+ DF LS ++ D + +S GT Y APE
Sbjct: 148 IYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FCGTVEYMAPEVVNRRGHTQ 205
Query: 142 KSDVYSFGVVLLELLTGRKP 161
+D +SFGV++ E+LTG P
Sbjct: 206 SADWWSFGVLMFEMLTGTLP 225
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 76/162 (46%), Gaps = 17/162 (10%)
Query: 7 HENFVQLLGYCVD-GTSRVLAYEFASNGSLHDILHGRKG-VKGAQPGP------VLSWQQ 58
H N V LLG C G ++ EF G+L L ++ + P L+ +
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 149
Query: 59 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSN---QAPDMAA 115
+ + AKG+E+L A IHRD+ + N+L+ + +V KI DF L+ + PD
Sbjct: 150 LICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPD-XV 205
Query: 116 RLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT 157
R R+ + APE +SDV+SFGV+L E+ +
Sbjct: 206 RKGDARL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 95/231 (41%), Gaps = 31/231 (13%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +L H N ++ ++ + E A G L ++ K K P + W+ V
Sbjct: 85 LLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTV-WKYFV 143
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
++ LE++H + ++HRDIK +NV I V K+ D L HS
Sbjct: 144 QLC----SALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS- 195
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPK 180
++GT Y +PE N KSD++S G +L E+ + P + +L +
Sbjct: 196 -LVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSP----FYGDKMNLYSLCK-- 248
Query: 181 LSEDKVRQCVDARLGGDYPPX----XXXXXXXXXXLCVQYEADFRPNMSIV 227
K+ QC DYPP +C+ + + RP+++ V
Sbjct: 249 ----KIEQC-------DYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYV 288
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 82/169 (48%), Gaps = 29/169 (17%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
+ +L+H N +Q G + + L E+ GS D+L K P+ Q V
Sbjct: 107 FLQKLRHPNTIQYRGCYLREHTAWLVMEYCL-GSASDLLEVHKK-------PL----QEV 154
Query: 61 KIAV---GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADF-DLSNQAPDMAAR 116
+IA GA +GL YLH ++IHRD+K+ N+L+ + + K+ DF S AP
Sbjct: 155 EIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP----- 206
Query: 117 LHSTRVLGTFGYHAPEYAMT---GQLNAKSDVYSFGVVLLELLTGRKPV 162
+ +GT + APE + GQ + K DV+S G+ +EL + P+
Sbjct: 207 --ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPL 253
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 76/162 (46%), Gaps = 17/162 (10%)
Query: 7 HENFVQLLGYCVD-GTSRVLAYEFASNGSLHDILHGRKG-VKGAQPGP------VLSWQQ 58
H N V LLG C G ++ EF G+L L ++ + P L+ +
Sbjct: 127 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 186
Query: 59 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSN---QAPDMAA 115
+ + AKG+E+L A IHRD+ + N+L+ + +V KI DF L+ + PD
Sbjct: 187 LICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY-V 242
Query: 116 RLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT 157
R R+ + APE +SDV+SFGV+L E+ +
Sbjct: 243 RKGDARL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 76/162 (46%), Gaps = 17/162 (10%)
Query: 7 HENFVQLLGYCVD-GTSRVLAYEFASNGSLHDILHGRKG-VKGAQPGP------VLSWQQ 58
H N V LLG C G ++ EF G+L L ++ + P L+ +
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 149
Query: 59 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSN---QAPDMAA 115
+ + AKG+E+L A IHRD+ + N+L+ + +V KI DF L+ + PD
Sbjct: 150 LICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD-XV 205
Query: 116 RLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT 157
R R+ + APE +SDV+SFGV+L E+ +
Sbjct: 206 RKGDARL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 76/162 (46%), Gaps = 17/162 (10%)
Query: 7 HENFVQLLGYCVD-GTSRVLAYEFASNGSLHDILHGRKG-VKGAQPGP------VLSWQQ 58
H N V LLG C G ++ EF G+L L ++ + P L+ +
Sbjct: 81 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 59 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSN---QAPDMAA 115
+ + AKG+E+L A IHRD+ + N+L+ + +V KI DF L+ + PD
Sbjct: 141 LICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPD-XV 196
Query: 116 RLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT 157
R R+ + APE +SDV+SFGV+L E+ +
Sbjct: 197 RKGDARL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 69 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 128
GL++LH K I++RD+K N+L+ D KIADF + + +M + GT Y
Sbjct: 130 GLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKE--NMLGDAKTNXFCGTPDY 184
Query: 129 HAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPV 162
APE + + N D +SFGV+L E+L G+ P
Sbjct: 185 IAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF 218
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 76/162 (46%), Gaps = 17/162 (10%)
Query: 7 HENFVQLLGYCVD-GTSRVLAYEFASNGSLHDILHGRKG-VKGAQPGP------VLSWQQ 58
H N V LLG C G ++ EF G+L L ++ + P L+ +
Sbjct: 81 HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 59 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSN---QAPDMAA 115
+ + AKG+E+L A IHRD+ + N+L+ + +V KI DF L+ + PD
Sbjct: 141 LICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPD-XV 196
Query: 116 RLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT 157
R R+ + APE +SDV+SFGV+L E+ +
Sbjct: 197 RKGDARL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 92/227 (40%), Gaps = 27/227 (11%)
Query: 11 VQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVL---SWQQRVKIAVGAA 67
V+LLG G ++ E + G L L + + PVL S + +++A A
Sbjct: 85 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLR--PEMENNPVLAPPSLSKMIQMAGEIA 142
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 127
G+ YL+ +HRD+ + N ++ +D KI DF ++ + + L
Sbjct: 143 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 199
Query: 128 YHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVR 187
+ +PE G SDV+SFGVVL E+ T L LS ++V
Sbjct: 200 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQPYQGLSNEQVL 244
Query: 188 QCVDARLGG--DYPPXXXXXXXXXXXLCVQYEADFRPNMSIVVKALQ 232
+ V GG D P +C QY RP+ ++ +++
Sbjct: 245 RFVME--GGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 289
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 78/168 (46%), Gaps = 27/168 (16%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +L H N ++L D +S + E + G L D + RK S
Sbjct: 74 LLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKR---------FSEHDAA 124
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLI----FDDDVAKIADFDLSN---QAPDM 113
+I G+ Y+H+ +I+HRD+K N+L+ D D+ KI DF LS Q M
Sbjct: 125 RIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDI-KIIDFGLSTCFQQNTKM 180
Query: 114 AARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
R+ GT Y APE + G + K DV+S GV+L LL+G P
Sbjct: 181 KDRI------GTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSGTPP 221
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 76/162 (46%), Gaps = 17/162 (10%)
Query: 7 HENFVQLLGYCVD-GTSRVLAYEFASNGSLHDILHGRKG-VKGAQPGP------VLSWQQ 58
H N V LLG C G ++ EF G+L L ++ + P L+ +
Sbjct: 81 HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 59 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSN---QAPDMAA 115
+ + AKG+E+L A IHRD+ + N+L+ + +V KI DF L+ + PD
Sbjct: 141 LICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY-V 196
Query: 116 RLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT 157
R R+ + APE +SDV+SFGV+L E+ +
Sbjct: 197 RKGDARL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 71/140 (50%), Gaps = 8/140 (5%)
Query: 25 LAYEFASNGSLHDILHGRKG--VKGAQPGPVLSWQQRVKIAVGA-AKGLEYLHEKADPHI 81
L Y F + G L+ IL +G + V+ ++ VK + A L++LH I
Sbjct: 91 LHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLG---I 147
Query: 82 IHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNA 141
I+RD+K N+L+ ++ K+ DF LS ++ D + +S GT Y APE
Sbjct: 148 IYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FCGTVEYMAPEVVNRRGHTQ 205
Query: 142 KSDVYSFGVVLLELLTGRKP 161
+D +SFGV++ E+LTG P
Sbjct: 206 SADWWSFGVLMFEMLTGTLP 225
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 78/168 (46%), Gaps = 27/168 (16%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +L H N ++L D +S + E + G L D + RK S
Sbjct: 74 LLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKR---------FSEHDAA 124
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIF----DDDVAKIADFDLSN---QAPDM 113
+I G+ Y+H+ +I+HRD+K N+L+ D D+ KI DF LS Q M
Sbjct: 125 RIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDI-KIIDFGLSTCFQQNTKM 180
Query: 114 AARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
R+ GT Y APE + G + K DV+S GV+L LL+G P
Sbjct: 181 KDRI------GTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSGTPP 221
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 71/140 (50%), Gaps = 8/140 (5%)
Query: 25 LAYEFASNGSLHDILHGRKG--VKGAQPGPVLSWQQRVKIAVGA-AKGLEYLHEKADPHI 81
L Y F + G L+ IL +G + V+ ++ VK + A L++LH I
Sbjct: 92 LHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLG---I 148
Query: 82 IHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNA 141
I+RD+K N+L+ ++ K+ DF LS ++ D + +S GT Y APE
Sbjct: 149 IYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FCGTVEYMAPEVVNRRGHTQ 206
Query: 142 KSDVYSFGVVLLELLTGRKP 161
+D +SFGV++ E+LTG P
Sbjct: 207 SADWWSFGVLMFEMLTGTLP 226
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 76/162 (46%), Gaps = 17/162 (10%)
Query: 7 HENFVQLLGYCVD-GTSRVLAYEFASNGSLHDILHGRKG-VKGAQPGP------VLSWQQ 58
H N V LLG C G ++ EF G+L L ++ + P L+ +
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 149
Query: 59 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSN---QAPDMAA 115
+ + AKG+E+L A IHRD+ + N+L+ + +V KI DF L+ + PD
Sbjct: 150 LICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY-V 205
Query: 116 RLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT 157
R R+ + APE +SDV+SFGV+L E+ +
Sbjct: 206 RKGDARL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 76/162 (46%), Gaps = 17/162 (10%)
Query: 7 HENFVQLLGYCVD-GTSRVLAYEFASNGSLHDILHGRKG-VKGAQPGP------VLSWQQ 58
H N V LLG C G ++ EF G+L L ++ + P L+ +
Sbjct: 81 HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 59 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSN---QAPDMAA 115
+ + AKG+E+L A IHRD+ + N+L+ + +V KI DF L+ + PD
Sbjct: 141 LICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY-V 196
Query: 116 RLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT 157
R R+ + APE +SDV+SFGV+L E+ +
Sbjct: 197 RKGDARL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 74/158 (46%), Gaps = 13/158 (8%)
Query: 7 HENFVQLLGYCVD-GTSRVLAYEFASNGSLHDILHGRKGVKGAQPG---PVLSWQQRVKI 62
H N V LLG C G ++ EF G+L L ++ L+ + +
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXY 149
Query: 63 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSN---QAPDMAARLHS 119
+ AKG+E+L A IHRD+ + N+L+ + +V KI DF L+ + PD R
Sbjct: 150 SFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDY-VRKGD 205
Query: 120 TRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT 157
R+ + APE +SDV+SFGV+L E+ +
Sbjct: 206 ARL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 82/169 (48%), Gaps = 29/169 (17%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
+ +L+H N +Q G + + L E+ GS D+L K P+ Q V
Sbjct: 68 FLQKLRHPNTIQYRGCYLREHTAWLVMEYCL-GSASDLLEVHKK-------PL----QEV 115
Query: 61 KIAV---GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADF-DLSNQAPDMAAR 116
+IA GA +GL YLH ++IHRD+K+ N+L+ + + K+ DF S AP
Sbjct: 116 EIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP----- 167
Query: 117 LHSTRVLGTFGYHAPEYAMT---GQLNAKSDVYSFGVVLLELLTGRKPV 162
+ +GT + APE + GQ + K DV+S G+ +EL + P+
Sbjct: 168 --ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPL 214
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 74/158 (46%), Gaps = 13/158 (8%)
Query: 7 HENFVQLLGYCVD-GTSRVLAYEFASNGSLHDILHGRKGVKGAQPG---PVLSWQQRVKI 62
H N V LLG C G ++ EF G+L L ++ L+ + +
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICY 149
Query: 63 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSN---QAPDMAARLHS 119
+ AKG+E+L A IHRD+ + N+L+ + +V KI DF L+ + PD R
Sbjct: 150 SFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY-VRKGD 205
Query: 120 TRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT 157
R+ + APE +SDV+SFGV+L E+ +
Sbjct: 206 ARL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 77/162 (47%), Gaps = 20/162 (12%)
Query: 5 LKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKG--VKGAQPGPVLSWQQRVKI 62
L H N ++L G + +++ E A GSL D L +G + G LS +
Sbjct: 68 LDHRNLIRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLGT-----LS-----RY 116
Query: 63 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAP--DMAARLHST 120
AV A+G+ YL K IHRD+ + N+L+ D+ KI DF L P D +
Sbjct: 117 AVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEH 173
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
R + F + APE T + SD + FGV L E+ T G++P
Sbjct: 174 RKV-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 78/168 (46%), Gaps = 27/168 (16%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +L H N ++L D +S + E + G L D + RK S
Sbjct: 74 LLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKR---------FSEHDAA 124
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIF----DDDVAKIADFDLSN---QAPDM 113
+I G+ Y+H+ +I+HRD+K N+L+ D D+ KI DF LS Q M
Sbjct: 125 RIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDI-KIIDFGLSTCFQQNTKM 180
Query: 114 AARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
R+ GT Y APE + G + K DV+S GV+L LL+G P
Sbjct: 181 KDRI------GTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSGTPP 221
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 72/160 (45%), Gaps = 14/160 (8%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ LKHEN + LL TS E S L L G + LS +
Sbjct: 80 LLKHLKHENVIGLLDVFTPATS----IEDFSEVYLVTTLMG-ADLNNIVKSQALSDEHVQ 134
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+ +GL+Y+H IIHRD+K SNV + +D +I DF L+ QA + T
Sbjct: 135 FLVYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADE-----EMT 186
Query: 121 RVLGTFGYHAPEYAMTG-QLNAKSDVYSFGVVLLELLTGR 159
+ T Y APE + N D++S G ++ ELL G+
Sbjct: 187 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 77/162 (47%), Gaps = 20/162 (12%)
Query: 5 LKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKG--VKGAQPGPVLSWQQRVKI 62
L H N ++L G + +++ E A GSL D L +G + G LS +
Sbjct: 78 LDHRNLIRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLGT-----LS-----RY 126
Query: 63 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAP--DMAARLHST 120
AV A+G+ YL K IHRD+ + N+L+ D+ KI DF L P D +
Sbjct: 127 AVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEH 183
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
R + F + APE T + SD + FGV L E+ T G++P
Sbjct: 184 RKV-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 77/162 (47%), Gaps = 20/162 (12%)
Query: 5 LKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKG--VKGAQPGPVLSWQQRVKI 62
L H N ++L G + +++ E A GSL D L +G + G LS +
Sbjct: 72 LDHRNLIRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLGT-----LS-----RY 120
Query: 63 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAP--DMAARLHST 120
AV A+G+ YL K IHRD+ + N+L+ D+ KI DF L P D +
Sbjct: 121 AVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEH 177
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
R + F + APE T + SD + FGV L E+ T G++P
Sbjct: 178 RKV-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 218
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 75/157 (47%), Gaps = 17/157 (10%)
Query: 6 KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVG 65
+H N V++ + G + EF G+L DI+ + L+ +Q +
Sbjct: 100 QHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVR----------LNEEQIATVCEA 149
Query: 66 AAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQ-APDMAARLHSTRVLG 124
+ L YLH + +IHRDIKS ++L+ D K++DF Q + D+ R ++G
Sbjct: 150 VLQALAYLHAQG---VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKR---KXLVG 203
Query: 125 TFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
T + APE + D++S G++++E++ G P
Sbjct: 204 TPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPP 240
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 77/162 (47%), Gaps = 20/162 (12%)
Query: 5 LKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKG--VKGAQPGPVLSWQQRVKI 62
L H N ++L G + +++ E A GSL D L +G + G LS +
Sbjct: 68 LDHRNLIRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLGT-----LS-----RY 116
Query: 63 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAP--DMAARLHST 120
AV A+G+ YL K IHRD+ + N+L+ D+ KI DF L P D +
Sbjct: 117 AVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEH 173
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
R + F + APE T + SD + FGV L E+ T G++P
Sbjct: 174 RKV-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 78/162 (48%), Gaps = 20/162 (12%)
Query: 5 LKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDIL--HGRKGVKGAQPGPVLSWQQRVKI 62
L H N V+L + L E+AS G + D L HG K A+ ++Q V
Sbjct: 63 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARA----KFRQIVS- 117
Query: 63 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRV 122
++Y H+K I+HRD+K+ N+L+ D KIADF SN+ +L +
Sbjct: 118 ------AVQYCHQK---FIVHRDLKAENLLLDADMNIKIADFGFSNEFT-FGNKLDT--F 165
Query: 123 LGTFGYHAPEYAMTGQLNA-KSDVYSFGVVLLELLTGRKPVD 163
G+ Y APE + + + DV+S GV+L L++G P D
Sbjct: 166 CGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 207
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 77/162 (47%), Gaps = 20/162 (12%)
Query: 5 LKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKG--VKGAQPGPVLSWQQRVKI 62
L H N ++L G + +++ E A GSL D L +G + G LS +
Sbjct: 68 LDHRNLIRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLGT-----LS-----RY 116
Query: 63 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAP--DMAARLHST 120
AV A+G+ YL K IHRD+ + N+L+ D+ KI DF L P D +
Sbjct: 117 AVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEH 173
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
R + F + APE T + SD + FGV L E+ T G++P
Sbjct: 174 RKV-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 77/162 (47%), Gaps = 20/162 (12%)
Query: 5 LKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKG--VKGAQPGPVLSWQQRVKI 62
L H N ++L G + +++ E A GSL D L +G + G LS +
Sbjct: 78 LDHRNLIRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLGT-----LS-----RY 126
Query: 63 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAP--DMAARLHST 120
AV A+G+ YL K IHRD+ + N+L+ D+ KI DF L P D +
Sbjct: 127 AVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEH 183
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
R + F + APE T + SD + FGV L E+ T G++P
Sbjct: 184 RKV-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 89/225 (39%), Gaps = 23/225 (10%)
Query: 11 VQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQP---GPVLSWQQRVKIAVGAA 67
V+LLG G ++ E + G L L + P P LS + +++A A
Sbjct: 91 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLS--KMIQMAGEIA 148
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 127
G+ YL+ +HRD+ + N ++ +D KI DF ++ + + L
Sbjct: 149 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 205
Query: 128 YHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVR 187
+ +PE G SDV+SFGVVL E+ T L LS ++V
Sbjct: 206 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQPYQGLSNEQVL 250
Query: 188 QCVDARLGGDYPPXXXXXXXXXXXLCVQYEADFRPNMSIVVKALQ 232
+ V D P +C QY RP+ ++ +++
Sbjct: 251 RFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 295
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 90/225 (40%), Gaps = 23/225 (10%)
Query: 11 VQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVL---SWQQRVKIAVGAA 67
V+LLG G ++ E + G L L + + PVL S + +++A A
Sbjct: 78 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLR--PEMENNPVLAPPSLSKMIQMAGEIA 135
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 127
G+ YL+ +HRD+ + N ++ +D KI DF ++ + + L
Sbjct: 136 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 192
Query: 128 YHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVR 187
+ +PE G SDV+SFGVVL E+ T L LS ++V
Sbjct: 193 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQPYQGLSNEQVL 237
Query: 188 QCVDARLGGDYPPXXXXXXXXXXXLCVQYEADFRPNMSIVVKALQ 232
+ V D P +C QY RP+ ++ +++
Sbjct: 238 RFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 282
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 79/161 (49%), Gaps = 19/161 (11%)
Query: 5 LKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAV 64
L+H + ++L T V+ E+A G L D + +K + + + Q++ A+
Sbjct: 66 LRHPHIIKLYDVITTPTDIVMVIEYAG-GELFDYIVEKKRMTEDEGR---RFFQQIICAI 121
Query: 65 GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLG 124
EY H I+HRD+K N+L+ D+ KIADF LSN D S G
Sbjct: 122 ------EYCHRHK---IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSC---G 169
Query: 125 TFGYHAPEYAMTGQLNA--KSDVYSFGVVLLELLTGRKPVD 163
+ Y APE + G+L A + DV+S G+VL +L GR P D
Sbjct: 170 SPNYAAPE-VINGKLYAGPEVDVWSCGIVLYVMLVGRLPFD 209
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 77/162 (47%), Gaps = 20/162 (12%)
Query: 5 LKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKG--VKGAQPGPVLSWQQRVKI 62
L H N ++L G + +++ E A GSL D L +G + G LS +
Sbjct: 72 LDHRNLIRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLGT-----LS-----RY 120
Query: 63 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAP--DMAARLHST 120
AV A+G+ YL K IHRD+ + N+L+ D+ KI DF L P D +
Sbjct: 121 AVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEH 177
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
R + F + APE T + SD + FGV L E+ T G++P
Sbjct: 178 RKV-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 218
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 90/225 (40%), Gaps = 23/225 (10%)
Query: 11 VQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVL---SWQQRVKIAVGAA 67
V+LLG G ++ E + G L L + + PVL S + +++A A
Sbjct: 91 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLR--PEMENNPVLAPPSLSKMIQMAGEIA 148
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 127
G+ YL+ +HRD+ + N ++ +D KI DF ++ + + L
Sbjct: 149 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 205
Query: 128 YHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVR 187
+ +PE G SDV+SFGVVL E+ T L LS ++V
Sbjct: 206 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQPYQGLSNEQVL 250
Query: 188 QCVDARLGGDYPPXXXXXXXXXXXLCVQYEADFRPNMSIVVKALQ 232
+ V D P +C QY RP+ ++ +++
Sbjct: 251 RFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 295
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 89/225 (39%), Gaps = 23/225 (10%)
Query: 11 VQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQP---GPVLSWQQRVKIAVGAA 67
V+LLG G ++ E + G L L + P P LS + +++A A
Sbjct: 81 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLS--KMIQMAGEIA 138
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 127
G+ YL+ +HRD+ + N ++ +D KI DF ++ + + L
Sbjct: 139 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 195
Query: 128 YHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVR 187
+ +PE G SDV+SFGVVL E+ T L LS ++V
Sbjct: 196 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQPYQGLSNEQVL 240
Query: 188 QCVDARLGGDYPPXXXXXXXXXXXLCVQYEADFRPNMSIVVKALQ 232
+ V D P +C QY RP+ ++ +++
Sbjct: 241 RFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 285
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 72/160 (45%), Gaps = 14/160 (8%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ LKHEN + LL TS E S L L G + LS +
Sbjct: 80 LLKHLKHENVIGLLDVFTPATS----IEDFSEVYLVTTLMG-ADLNNIVKCQALSDEHVQ 134
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+ +GL+Y+H IIHRD+K SNV + +D +I DF L+ QA + T
Sbjct: 135 FLVYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADE-----EMT 186
Query: 121 RVLGTFGYHAPEYAMTG-QLNAKSDVYSFGVVLLELLTGR 159
+ T Y APE + N D++S G ++ ELL G+
Sbjct: 187 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 72/158 (45%), Gaps = 11/158 (6%)
Query: 5 LKHENFVQLLGYCVDGTSR-----VLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQR 59
H N ++LLG C++ +S+ ++ F G LH L + G + P+ Q
Sbjct: 93 FSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPL---QTL 149
Query: 60 VKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHS 119
+K V A G+EYL + + +HRD+ + N ++ DD +ADF LS +
Sbjct: 150 LKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQG 206
Query: 120 TRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT 157
+ A E +KSDV++FGV + E+ T
Sbjct: 207 RIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIAT 244
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 90/225 (40%), Gaps = 23/225 (10%)
Query: 11 VQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVL---SWQQRVKIAVGAA 67
V+LLG G ++ E + G L L + + PVL S + +++A A
Sbjct: 84 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLR--PEMENNPVLAPPSLSKMIQMAGEIA 141
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 127
G+ YL+ +HRD+ + N ++ +D KI DF ++ + + L
Sbjct: 142 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 198
Query: 128 YHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVR 187
+ +PE G SDV+SFGVVL E+ T L LS ++V
Sbjct: 199 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQPYQGLSNEQVL 243
Query: 188 QCVDARLGGDYPPXXXXXXXXXXXLCVQYEADFRPNMSIVVKALQ 232
+ V D P +C QY RP+ ++ +++
Sbjct: 244 RFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 288
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 92/227 (40%), Gaps = 27/227 (11%)
Query: 11 VQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVL---SWQQRVKIAVGAA 67
V+LLG G ++ E + G L L + + PVL S + +++A A
Sbjct: 84 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLR--PEMENNPVLAPPSLSKMIQMAGEIA 141
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 127
G+ YL+ +HRD+ + N ++ +D KI DF ++ + + L
Sbjct: 142 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 198
Query: 128 YHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVR 187
+ +PE G SDV+SFGVVL E+ T L LS ++V
Sbjct: 199 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQPYQGLSNEQVL 243
Query: 188 QCVDARLGG--DYPPXXXXXXXXXXXLCVQYEADFRPNMSIVVKALQ 232
+ V GG D P +C QY RP+ ++ +++
Sbjct: 244 RFVME--GGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 288
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 90/225 (40%), Gaps = 23/225 (10%)
Query: 11 VQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVL---SWQQRVKIAVGAA 67
V+LLG G ++ E + G L L + + PVL S + +++A A
Sbjct: 82 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLR--PEMENNPVLAPPSLSKMIQMAGEIA 139
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 127
G+ YL+ +HRD+ + N ++ +D KI DF ++ + + L
Sbjct: 140 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 196
Query: 128 YHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVR 187
+ +PE G SDV+SFGVVL E+ T L LS ++V
Sbjct: 197 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQPYQGLSNEQVL 241
Query: 188 QCVDARLGGDYPPXXXXXXXXXXXLCVQYEADFRPNMSIVVKALQ 232
+ V D P +C QY RP+ ++ +++
Sbjct: 242 RFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 286
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 90/225 (40%), Gaps = 23/225 (10%)
Query: 11 VQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVL---SWQQRVKIAVGAA 67
V+LLG G ++ E + G L L + + PVL S + +++A A
Sbjct: 85 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLR--PEMENNPVLAPPSLSKMIQMAGEIA 142
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 127
G+ YL+ +HRD+ + N ++ +D KI DF ++ + + L
Sbjct: 143 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 199
Query: 128 YHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVR 187
+ +PE G SDV+SFGVVL E+ T L LS ++V
Sbjct: 200 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQPYQGLSNEQVL 244
Query: 188 QCVDARLGGDYPPXXXXXXXXXXXLCVQYEADFRPNMSIVVKALQ 232
+ V D P +C QY RP+ ++ +++
Sbjct: 245 RFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 289
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 92/227 (40%), Gaps = 27/227 (11%)
Query: 11 VQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVL---SWQQRVKIAVGAA 67
V+LLG G ++ E + G L L + + PVL S + +++A A
Sbjct: 113 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLR--PEMENNPVLAPPSLSKMIQMAGEIA 170
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 127
G+ YL+ +HRD+ + N ++ +D KI DF ++ + + L
Sbjct: 171 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 227
Query: 128 YHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVR 187
+ +PE G SDV+SFGVVL E+ T L LS ++V
Sbjct: 228 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQPYQGLSNEQVL 272
Query: 188 QCVDARLGG--DYPPXXXXXXXXXXXLCVQYEADFRPNMSIVVKALQ 232
+ V GG D P +C QY RP+ ++ +++
Sbjct: 273 RFVME--GGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 317
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 72/153 (47%), Gaps = 13/153 (8%)
Query: 12 QLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLE 71
+LLG C+ T +++ + G L D + K G+Q +L+W V AKG+
Sbjct: 115 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQY--LLNW------CVQIAKGMN 165
Query: 72 YLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAP 131
YL D ++HRD+ + NVL+ KI DF L+ H+ + A
Sbjct: 166 YLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 222
Query: 132 EYAMTGQLNAKSDVYSFGVVLLELLT-GRKPVD 163
E + +SDV+S+GV + EL+T G KP D
Sbjct: 223 ESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 255
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 64/132 (48%), Gaps = 13/132 (9%)
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
KIAV K LE+LH K +IHRD+K SNVLI K DF +S D A+
Sbjct: 140 KIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDA 197
Query: 121 RVLGTFGYHAPEYAMTGQLN-----AKSDVYSFGVVLLELLTGRKPVDHTLPRGQQ--SL 173
G Y APE + +LN KSD++S G+ +EL R P D QQ +
Sbjct: 198 ---GCKPYXAPE-RINPELNQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQV 253
Query: 174 VTWATPKLSEDK 185
V +P+L DK
Sbjct: 254 VEEPSPQLPADK 265
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 75/165 (45%), Gaps = 24/165 (14%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +KHEN + LL TS ++ + H + GA ++ Q+
Sbjct: 103 LLKHMKHENVIGLLDVFTPATS------LEEFNDVYLVTH----LMGADLNNIVKCQKLT 152
Query: 61 K-----IAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAA 115
+ +GL+Y+H AD IIHRD+K SN+ + +D KI DF L+ D
Sbjct: 153 DDHVQFLIYQILRGLKYIH-SAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDD--- 206
Query: 116 RLHSTRVLGTFGYHAPEYAMTG-QLNAKSDVYSFGVVLLELLTGR 159
T + T Y APE + N D++S G ++ ELLTGR
Sbjct: 207 --EMTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 72/153 (47%), Gaps = 13/153 (8%)
Query: 12 QLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLE 71
+LLG C+ T +++ + G L D + K G+Q +L+W V AKG+
Sbjct: 91 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQY--LLNW------CVQIAKGMN 141
Query: 72 YLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAP 131
YL D ++HRD+ + NVL+ KI DF L+ H+ + A
Sbjct: 142 YLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 198
Query: 132 EYAMTGQLNAKSDVYSFGVVLLELLT-GRKPVD 163
E + +SDV+S+GV + EL+T G KP D
Sbjct: 199 ESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 231
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 72/153 (47%), Gaps = 13/153 (8%)
Query: 12 QLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLE 71
+LLG C+ T +++ + G L D + K G+Q +L+W V AKG+
Sbjct: 81 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQY--LLNW------CVQIAKGMN 131
Query: 72 YLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAP 131
YL D ++HRD+ + NVL+ KI DF L+ H+ + A
Sbjct: 132 YLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 188
Query: 132 EYAMTGQLNAKSDVYSFGVVLLELLT-GRKPVD 163
E + +SDV+S+GV + EL+T G KP D
Sbjct: 189 ESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 78/164 (47%), Gaps = 13/164 (7%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
+++ + + + +LLG C+ T +++ + G L D + K G+Q +L+W
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQY--LLNW---- 122
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
V AKG+ YL D ++HRD+ + NVL+ KI DF L+ H+
Sbjct: 123 --CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 177
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKPVD 163
+ A E + +SDV+S+GV + EL+T G KP D
Sbjct: 178 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 78/164 (47%), Gaps = 13/164 (7%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
+++ + + + +LLG C+ T +++ + G L D + K G+Q +L+W
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQY--LLNW---- 122
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
V AKG+ YL D ++HRD+ + NVL+ KI DF L+ H+
Sbjct: 123 --CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 177
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKPVD 163
+ A E + +SDV+S+GV + EL+T G KP D
Sbjct: 178 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 72/153 (47%), Gaps = 13/153 (8%)
Query: 12 QLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLE 71
+LLG C+ T +++ + G L D + K G+Q +L+W V AKG+
Sbjct: 75 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQY--LLNW------CVQIAKGMN 125
Query: 72 YLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAP 131
YL D ++HRD+ + NVL+ KI DF L+ H+ + A
Sbjct: 126 YLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 182
Query: 132 EYAMTGQLNAKSDVYSFGVVLLELLT-GRKPVD 163
E + +SDV+S+GV + EL+T G KP D
Sbjct: 183 ESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 215
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 74/158 (46%), Gaps = 13/158 (8%)
Query: 7 HENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGA 66
H F+ L Y + + + NG DI + V PG +Q+ I A
Sbjct: 243 HSRFIVSLAYAFETKTDLCLVMTIMNGG--DIRYHIYNVDEDNPG----FQEPRAIFYTA 296
Query: 67 --AKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLG 124
GLE+LH++ +II+RD+K NVL+ DD +I+D L+ + A + + G
Sbjct: 297 QIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELK--AGQTKTKGYAG 351
Query: 125 TFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPV 162
T G+ APE + + + D ++ GV L E++ R P
Sbjct: 352 TPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 72/160 (45%), Gaps = 14/160 (8%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ LKHEN + LL TS E S L L G + LS +
Sbjct: 72 LLKHLKHENVIGLLDVFTPATS----IEDFSEVYLVTTLMG-ADLNNIVKCQALSDEHVQ 126
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+ +GL+Y+H IIHRD+K SNV + +D +I DF L+ QA + T
Sbjct: 127 FLVYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGLARQADE-----EMT 178
Query: 121 RVLGTFGYHAPEYAMTG-QLNAKSDVYSFGVVLLELLTGR 159
+ T Y APE + N D++S G ++ ELL G+
Sbjct: 179 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 52/93 (55%), Gaps = 9/93 (9%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 127
+GL+Y+H AD IIHRD+K SN+ + +D KI DF L+ D A +TR
Sbjct: 136 RGLKYIH-SAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR-----W 187
Query: 128 YHAPEYAMTG-QLNAKSDVYSFGVVLLELLTGR 159
Y APE + N D++S G ++ ELLTGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 52/93 (55%), Gaps = 9/93 (9%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 127
+GL+Y+H AD IIHRD+K SN+ + +D KI DF L+ D A +TR
Sbjct: 132 RGLKYIH-SAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR-----W 183
Query: 128 YHAPEYAMTG-QLNAKSDVYSFGVVLLELLTGR 159
Y APE + N D++S G ++ ELLTGR
Sbjct: 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 78/164 (47%), Gaps = 13/164 (7%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
+++ + + + +LLG C+ T +++ + G L D + K G+Q +L+W
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQY--LLNW---- 124
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
V AKG+ YL D ++HRD+ + NVL+ KI DF L+ H+
Sbjct: 125 --CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 179
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKPVD 163
+ A E + +SDV+S+GV + EL+T G KP D
Sbjct: 180 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 78/164 (47%), Gaps = 13/164 (7%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
+++ + + + +LLG C+ T +++ + G L D + K G+Q +L+W
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQY--LLNW---- 125
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
V AKG+ YL D ++HRD+ + NVL+ KI DF L+ H+
Sbjct: 126 --CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 180
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKPVD 163
+ A E + +SDV+S+GV + EL+T G KP D
Sbjct: 181 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 52/93 (55%), Gaps = 9/93 (9%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 127
+GL+Y+H AD IIHRD+K SN+ + +D KI DF L+ D A +TR
Sbjct: 136 RGLKYIH-SAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR-----W 187
Query: 128 YHAPEYAMTG-QLNAKSDVYSFGVVLLELLTGR 159
Y APE + N D++S G ++ ELLTGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 78/164 (47%), Gaps = 13/164 (7%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
+++ + + + +LLG C+ T +++ + G L D + K G+Q +L+W
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQY--LLNW---- 129
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
V AKG+ YL D ++HRD+ + NVL+ KI DF L+ H+
Sbjct: 130 --CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 184
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKPVD 163
+ A E + +SDV+S+GV + EL+T G KP D
Sbjct: 185 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 78/164 (47%), Gaps = 13/164 (7%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
+++ + + + +LLG C+ T +++ + G L D + K G+Q +L+W
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQY--LLNW---- 125
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
V AKG+ YL D ++HRD+ + NVL+ KI DF L+ H+
Sbjct: 126 --CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 180
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKPVD 163
+ A E + +SDV+S+GV + EL+T G KP D
Sbjct: 181 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 78/164 (47%), Gaps = 13/164 (7%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
+++ + + + +LLG C+ T +++ + G L D + K G+Q +L+W
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQY--LLNW---- 125
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
V AKG+ YL D ++HRD+ + NVL+ KI DF L+ H+
Sbjct: 126 --CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 180
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKPVD 163
+ A E + +SDV+S+GV + EL+T G KP D
Sbjct: 181 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 74/158 (46%), Gaps = 13/158 (8%)
Query: 7 HENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGA 66
H F+ L Y + + + NG DI + V PG +Q+ I A
Sbjct: 243 HSRFIVSLAYAFETKTDLCLVMTIMNGG--DIRYHIYNVDEDNPG----FQEPRAIFYTA 296
Query: 67 --AKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLG 124
GLE+LH++ +II+RD+K NVL+ DD +I+D L+ + A + + G
Sbjct: 297 QIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELK--AGQTKTKGYAG 351
Query: 125 TFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPV 162
T G+ APE + + + D ++ GV L E++ R P
Sbjct: 352 TPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 78/164 (47%), Gaps = 13/164 (7%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
+++ + + + +LLG C+ T +++ + G L D + K G+Q +L+W
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQY--LLNW---- 129
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
V AKG+ YL D ++HRD+ + NVL+ KI DF L+ H+
Sbjct: 130 --CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 184
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKPVD 163
+ A E + +SDV+S+GV + EL+T G KP D
Sbjct: 185 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 78/164 (47%), Gaps = 13/164 (7%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
+++ + + + +LLG C+ T +++ + G L D + K G+Q +L+W
Sbjct: 76 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQY--LLNW---- 128
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
V AKG+ YL D ++HRD+ + NVL+ KI DF L+ H+
Sbjct: 129 --CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 183
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKPVD 163
+ A E + +SDV+S+GV + EL+T G KP D
Sbjct: 184 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 227
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 74/158 (46%), Gaps = 13/158 (8%)
Query: 7 HENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGA 66
H F+ L Y + + + NG DI + V PG +Q+ I A
Sbjct: 243 HSRFIVSLAYAFETKTDLCLVMTIMNGG--DIRYHIYNVDEDNPG----FQEPRAIFYTA 296
Query: 67 --AKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLG 124
GLE+LH++ +II+RD+K NVL+ DD +I+D L+ + A + + G
Sbjct: 297 QIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELK--AGQTKTKGYAG 351
Query: 125 TFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPV 162
T G+ APE + + + D ++ GV L E++ R P
Sbjct: 352 TPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 72/153 (47%), Gaps = 13/153 (8%)
Query: 12 QLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLE 71
+LLG C+ T +++ + G L D + K G+Q +L+W V AKG+
Sbjct: 81 RLLGICLTSTVQLIT-QLMPFGXLLDYVREHKDNIGSQY--LLNW------CVQIAKGMN 131
Query: 72 YLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAP 131
YL D ++HRD+ + NVL+ KI DF L+ H+ + A
Sbjct: 132 YLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 188
Query: 132 EYAMTGQLNAKSDVYSFGVVLLELLT-GRKPVD 163
E + +SDV+S+GV + EL+T G KP D
Sbjct: 189 ESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 74/158 (46%), Gaps = 13/158 (8%)
Query: 7 HENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGA 66
H F+ L Y + + + NG DI + V PG +Q+ I A
Sbjct: 243 HSRFIVSLAYAFETKTDLCLVMTIMNGG--DIRYHIYNVDEDNPG----FQEPRAIFYTA 296
Query: 67 --AKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLG 124
GLE+LH++ +II+RD+K NVL+ DD +I+D L+ + A + + G
Sbjct: 297 QIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELK--AGQTKTKGYAG 351
Query: 125 TFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPV 162
T G+ APE + + + D ++ GV L E++ R P
Sbjct: 352 TPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 78/164 (47%), Gaps = 13/164 (7%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
+++ + + + +LLG C+ T +++ + G L D + K G+Q +L+W
Sbjct: 95 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQY--LLNW---- 147
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
V AKG+ YL D ++HRD+ + NVL+ KI DF L+ H+
Sbjct: 148 --CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 202
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKPVD 163
+ A E + +SDV+S+GV + EL+T G KP D
Sbjct: 203 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 246
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 77/164 (46%), Gaps = 13/164 (7%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
+++ + + + +LLG C+ T + L + G L D + K G+Q +L+W
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQY--LLNW---- 122
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
V AKG+ YL D ++HRD+ + NVL+ KI DF L+ H+
Sbjct: 123 --CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 177
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKPVD 163
+ A E + +SDV+S+GV + EL+T G KP D
Sbjct: 178 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 77/164 (46%), Gaps = 13/164 (7%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
+++ + + + +LLG C+ T + L + G L D + K G+Q +L+W
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQY--LLNW---- 125
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
V AKG+ YL D ++HRD+ + NVL+ KI DF L+ H+
Sbjct: 126 --CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 180
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKPVD 163
+ A E + +SDV+S+GV + EL+T G KP D
Sbjct: 181 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 64/142 (45%), Gaps = 19/142 (13%)
Query: 25 LAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHR 84
+ + +L D ++GR ++ + L I + A+ +E+LH K ++HR
Sbjct: 92 IQMQLCRKENLKDWMNGRCTIEERERSVCLH------IFLQIAEAVEFLHSKG---LMHR 142
Query: 85 DIKSSNVLIFDDDVAKIADFDLSNQAPD----------MAARLHSTRVLGTFGYHAPEYA 134
D+K SN+ DDV K+ DF L M A T +GT Y +PE
Sbjct: 143 DLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQI 202
Query: 135 MTGQLNAKSDVYSFGVVLLELL 156
+ K D++S G++L ELL
Sbjct: 203 HGNSYSHKVDIFSLGLILFELL 224
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 77/164 (46%), Gaps = 13/164 (7%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
+++ + + + +LLG C+ T + L + G L D + K G+Q +L+W
Sbjct: 74 VMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQY--LLNW---- 126
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
V AKG+ YL D ++HRD+ + NVL+ KI DF L+ H+
Sbjct: 127 --CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 181
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKPVD 163
+ A E + +SDV+S+GV + EL+T G KP D
Sbjct: 182 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 77/164 (46%), Gaps = 13/164 (7%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
+++ + + + +LLG C+ T + L + G L D + K G+Q +L+W
Sbjct: 71 VMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQY--LLNW---- 123
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
V AKG+ YL D ++HRD+ + NVL+ KI DF L+ H+
Sbjct: 124 --CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 178
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKPVD 163
+ A E + +SDV+S+GV + EL+T G KP D
Sbjct: 179 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 77/164 (46%), Gaps = 13/164 (7%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
+++ + + + +LLG C+ T + L + G L D + K G+Q +L+W
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQY--LLNW---- 129
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
V AKG+ YL D ++HRD+ + NVL+ KI DF L+ H+
Sbjct: 130 --CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 184
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKPVD 163
+ A E + +SDV+S+GV + EL+T G KP D
Sbjct: 185 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 77/164 (46%), Gaps = 13/164 (7%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
+++ + + + +LLG C+ T + L + G L D + K G+Q +L+W
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQY--LLNW---- 124
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
V AKG+ YL D ++HRD+ + NVL+ KI DF L+ H+
Sbjct: 125 --CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 179
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKPVD 163
+ A E + +SDV+S+GV + EL+T G KP D
Sbjct: 180 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 72/162 (44%), Gaps = 17/162 (10%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVL--AYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQ 58
++ LKH N V+ +D T+ L E+ G L ++ KG + L +
Sbjct: 58 LLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVI-----TKGTKERQYLDEEF 112
Query: 59 RVKIAVGAAKGLEYLHEKAD--PHIIHRDIKSSNVLIFDDDVAKIADFDLS---NQAPDM 113
+++ L+ H ++D ++HRD+K +NV + K+ DF L+ N D
Sbjct: 113 VLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDF 172
Query: 114 AARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLEL 155
A +GT Y +PE N KSD++S G +L EL
Sbjct: 173 AKEF-----VGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 71/153 (46%), Gaps = 13/153 (8%)
Query: 12 QLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLE 71
+LLG C+ T + L + G L D + K G+Q +L+W V AKG+
Sbjct: 82 RLLGICLTSTVQ-LIMQLMPFGXLLDYVREHKDNIGSQY--LLNW------CVQIAKGMN 132
Query: 72 YLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAP 131
YL D ++HRD+ + NVL+ KI DF L+ H+ + A
Sbjct: 133 YLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 189
Query: 132 EYAMTGQLNAKSDVYSFGVVLLELLT-GRKPVD 163
E + +SDV+S+GV + EL+T G KP D
Sbjct: 190 ESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 91/227 (40%), Gaps = 27/227 (11%)
Query: 11 VQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVL---SWQQRVKIAVGAA 67
V+LLG G ++ E + G L L + + PVL S + +++A A
Sbjct: 78 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLR--PEMENNPVLAPPSLSKMIQMAGEIA 135
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 127
G+ YL+ +HRD+ + N + +D KI DF ++ + + L
Sbjct: 136 DGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 192
Query: 128 YHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVR 187
+ +PE G SDV+SFGVVL E+ T L LS ++V
Sbjct: 193 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQPYQGLSNEQVL 237
Query: 188 QCVDARLGG--DYPPXXXXXXXXXXXLCVQYEADFRPNMSIVVKALQ 232
+ V GG D P +C QY RP+ ++ +++
Sbjct: 238 RFVME--GGLLDKPDNCPDMLLELMRMCWQYNPKMRPSFLEIISSIK 282
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 76/184 (41%), Gaps = 16/184 (8%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++SRL H FV+L D +A NG L + + G R
Sbjct: 85 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIR--------KIGSFDETCTRF 136
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
A LEYLH K IIHRD+K N+L+ +D +I DF + + + +
Sbjct: 137 YTA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 192
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPK 180
+GT Y +PE + SD+++ G ++ +L+ G P G + L+ K
Sbjct: 193 SFVGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPP----FRAGNEYLIFQKIIK 248
Query: 181 LSED 184
L D
Sbjct: 249 LEYD 252
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 67/143 (46%), Gaps = 17/143 (11%)
Query: 25 LAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHR 84
L EF GS+ D++ KG L + I +GL +LH+ +IHR
Sbjct: 104 LVMEFCGAGSVTDLIKNTKG-------NTLKEEWIAYICREILRGLSHLHQHK---VIHR 153
Query: 85 DIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQ-----L 139
DIK NVL+ ++ K+ DF +S Q R ++ +GT + APE +
Sbjct: 154 DIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNT--FIGTPYWMAPEVIACDENPDATY 211
Query: 140 NAKSDVYSFGVVLLELLTGRKPV 162
+ KSD++S G+ +E+ G P+
Sbjct: 212 DFKSDLWSLGITAIEMAEGAPPL 234
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 127
+GL+Y+H AD IIHRD+K SN+ + +D KI DF L+ D T + T
Sbjct: 138 RGLKYIH-SAD--IIHRDLKPSNLAVNEDSELKILDFGLARHTDD-----EMTGYVATRW 189
Query: 128 YHAPEYAMTG-QLNAKSDVYSFGVVLLELLTGR 159
Y APE + N D++S G ++ ELLTGR
Sbjct: 190 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 84/205 (40%), Gaps = 22/205 (10%)
Query: 7 HENFVQLLGYCVDGTSRVLAYEFASNGSLHDILH-GRKGVKGAQPGPVL--------SWQ 57
H N V LLG C G ++ E+ G L + L R ++ P + +
Sbjct: 109 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 168
Query: 58 QRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARL 117
+ + AKG+ +L A + IHRD+ + N+L+ + KI DF L+ + + +
Sbjct: 169 DLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYV 225
Query: 118 HSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRK-----PVD----HTLP 167
+ APE +SDV+S+G+ L EL + G PVD +
Sbjct: 226 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK 285
Query: 168 RGQQSLVTWATPKLSEDKVRQCVDA 192
G + L P D ++ C DA
Sbjct: 286 EGFRMLSPEHAPAEMYDIMKTCWDA 310
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 127
+GL+Y+H AD IIHRD+K SN+ + +D KI DF L+ D T + T
Sbjct: 142 RGLKYIH-SAD--IIHRDLKPSNLAVNEDSELKILDFGLARHTDD-----EMTGYVATRW 193
Query: 128 YHAPEYAMTG-QLNAKSDVYSFGVVLLELLTGR 159
Y APE + N D++S G ++ ELLTGR
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 84/205 (40%), Gaps = 22/205 (10%)
Query: 7 HENFVQLLGYCVDGTSRVLAYEFASNGSLHDILH-GRKGVKGAQPGPVL--------SWQ 57
H N V LLG C G ++ E+ G L + L R ++ P + +
Sbjct: 109 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 168
Query: 58 QRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARL 117
+ + AKG+ +L A + IHRD+ + N+L+ + KI DF L+ + + +
Sbjct: 169 DLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV 225
Query: 118 HSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRK-----PVD----HTLP 167
+ APE +SDV+S+G+ L EL + G PVD +
Sbjct: 226 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK 285
Query: 168 RGQQSLVTWATPKLSEDKVRQCVDA 192
G + L P D ++ C DA
Sbjct: 286 EGFRMLSPEHAPAEMYDIMKTCWDA 310
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 84/205 (40%), Gaps = 22/205 (10%)
Query: 7 HENFVQLLGYCVDGTSRVLAYEFASNGSLHDILH-GRKGVKGAQPGPVL--------SWQ 57
H N V LLG C G ++ E+ G L + L R ++ P + +
Sbjct: 104 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 163
Query: 58 QRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARL 117
+ + AKG+ +L A + IHRD+ + N+L+ + KI DF L+ + + +
Sbjct: 164 DLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV 220
Query: 118 HSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRK-----PVD----HTLP 167
+ APE +SDV+S+G+ L EL + G PVD +
Sbjct: 221 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK 280
Query: 168 RGQQSLVTWATPKLSEDKVRQCVDA 192
G + L P D ++ C DA
Sbjct: 281 EGFRMLSPEHAPAEMYDIMKTCWDA 305
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 84/205 (40%), Gaps = 22/205 (10%)
Query: 7 HENFVQLLGYCVDGTSRVLAYEFASNGSLHDILH-GRKGVKGAQPGPVL--------SWQ 57
H N V LLG C G ++ E+ G L + L R ++ P + +
Sbjct: 102 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 161
Query: 58 QRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARL 117
+ + AKG+ +L A + IHRD+ + N+L+ + KI DF L+ + + +
Sbjct: 162 DLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV 218
Query: 118 HSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRK-----PVD----HTLP 167
+ APE +SDV+S+G+ L EL + G PVD +
Sbjct: 219 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK 278
Query: 168 RGQQSLVTWATPKLSEDKVRQCVDA 192
G + L P D ++ C DA
Sbjct: 279 EGFRMLSPEHAPAEMYDIMKTCWDA 303
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 127
+GL+Y+H AD IIHRD+K SN+ + +D KI DF L+ D T + T
Sbjct: 141 RGLKYIH-SAD--IIHRDLKPSNLAVNEDXELKILDFGLARHTDD-----EMTGYVATRW 192
Query: 128 YHAPEYAMTG-QLNAKSDVYSFGVVLLELLTGR 159
Y APE + N D++S G ++ ELLTGR
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 84/205 (40%), Gaps = 22/205 (10%)
Query: 7 HENFVQLLGYCVDGTSRVLAYEFASNGSLHDILH-GRKGVKGAQPGPVL--------SWQ 57
H N V LLG C G ++ E+ G L + L R ++ P + +
Sbjct: 86 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 145
Query: 58 QRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARL 117
+ + AKG+ +L K + IHRD+ + N+L+ + KI DF L+ + + +
Sbjct: 146 DLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV 202
Query: 118 HSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRK-----PVD----HTLP 167
+ APE +SDV+S+G+ L EL + G PVD +
Sbjct: 203 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK 262
Query: 168 RGQQSLVTWATPKLSEDKVRQCVDA 192
G + L P D ++ C DA
Sbjct: 263 EGFRMLSPEHAPAEMYDIMKTCWDA 287
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 127
+GL+Y+H AD IIHRD+K SN+ + +D KI DF L+ D T + T
Sbjct: 147 RGLKYIH-SAD--IIHRDLKPSNLAVNEDXELKILDFGLARHTDD-----EMTGYVATRW 198
Query: 128 YHAPEYAMTG-QLNAKSDVYSFGVVLLELLTGR 159
Y APE + N D++S G ++ ELLTGR
Sbjct: 199 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 127
+GL+Y+H AD IIHRD+K SN+ + +D KI DF L+ D T + T
Sbjct: 141 RGLKYIH-SAD--IIHRDLKPSNLAVNEDXELKILDFGLARHTDD-----EMTGYVATRW 192
Query: 128 YHAPEYAMTG-QLNAKSDVYSFGVVLLELLTGR 159
Y APE + N D++S G ++ ELLTGR
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 76/164 (46%), Gaps = 14/164 (8%)
Query: 1 MVSRLKHENFVQLLGYCVDGT-SRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQR 59
++ H N + LLG C+ S ++ + +G L R ++ P + +
Sbjct: 83 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL------RNFIRNETHNPTV--KDL 134
Query: 60 VKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDM-AARLH 118
+ + AKG++YL K +HRD+ + N ++ + K+ADF L+ D +H
Sbjct: 135 IGFGLQVAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVH 191
Query: 119 S-TRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
+ T + A E T + KSDV+SFGV+L EL+T P
Sbjct: 192 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 127
+GL+Y+H AD IIHRD+K SN+ + +D KI DF L+ D T + T
Sbjct: 136 RGLKYIH-SAD--IIHRDLKPSNLAVNEDXELKILDFGLARHTDD-----EMTGYVATRW 187
Query: 128 YHAPEYAMTG-QLNAKSDVYSFGVVLLELLTGR 159
Y APE + N D++S G ++ ELLTGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 127
+GL+Y+H AD IIHRD+K SN+ + +D KI DF L+ D T + T
Sbjct: 136 RGLKYIH-SAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRW 187
Query: 128 YHAPEYAMTG-QLNAKSDVYSFGVVLLELLTGR 159
Y APE + N D++S G ++ ELLTGR
Sbjct: 188 YRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 127
+GL+Y+H AD IIHRD+K SN+ + +D KI DF L D T + T
Sbjct: 136 RGLKYIH-SAD--IIHRDLKPSNLAVNEDSELKILDFGLCRHTDD-----EMTGYVATRW 187
Query: 128 YHAPEYAMTG-QLNAKSDVYSFGVVLLELLTGR 159
Y APE + N D++S G ++ ELLTGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 80/169 (47%), Gaps = 19/169 (11%)
Query: 5 LKHENFVQLLGYCV--DGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKI 62
L H N + L+G + +G VL + +G L + ++ Q P + + +
Sbjct: 79 LNHPNVLALIGIMLPPEGLPHVLL-PYMCHGDL------LQFIRSPQRNPTV--KDLISF 129
Query: 63 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD---MAARLHS 119
+ A+G+EYL E+ +HRD+ + N ++ + K+ADF L+ D + + H
Sbjct: 130 GLQVARGMEYLAEQK---FVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHR 186
Query: 120 TRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKPVDHTLP 167
L + A E T + KSDV+SFGV+L ELLT G P H P
Sbjct: 187 HARLPV-KWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDP 234
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 57/97 (58%), Gaps = 8/97 (8%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 127
KG+EYLH + IIHRDIK SN+L+ +D KIADF +SN+ A L +T +GT
Sbjct: 148 KGIEYLHYQK---IIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNT--VGTPA 202
Query: 128 YHAPEYAMTGQ--LNAKS-DVYSFGVVLLELLTGRKP 161
+ APE + + K+ DV++ GV L + G+ P
Sbjct: 203 FMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCP 239
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 75/184 (40%), Gaps = 16/184 (8%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++SRL H FV+L D +A NG L + + G R
Sbjct: 85 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR--------KIGSFDETCTRF 136
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
A LEYLH K IIHRD+K N+L+ +D +I DF + + + +
Sbjct: 137 YTA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 192
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPK 180
+GT Y +PE SD+++ G ++ +L+ G P G + L+ K
Sbjct: 193 XFVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPP----FRAGNEGLIFAKIIK 248
Query: 181 LSED 184
L D
Sbjct: 249 LEYD 252
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 62/141 (43%), Gaps = 15/141 (10%)
Query: 24 VLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIH 83
+LA E+ G L L+ + G + GP+ + + + L YLHE IIH
Sbjct: 95 LLAMEYCEGGDLRKYLNQFENCCGLKEGPIRT------LLSDISSALRYLHEN---RIIH 145
Query: 84 RDIKSSNVLIF---DDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLN 140
RD+K N+++ + KI D A ++ T +GT Y APE +
Sbjct: 146 RDLKPENIVLQPGPQRLIHKIIDL---GYAKELDQGELCTEFVGTLQYLAPELLEQKKYT 202
Query: 141 AKSDVYSFGVVLLELLTGRKP 161
D +SFG + E +TG +P
Sbjct: 203 VTVDYWSFGTLAFECITGFRP 223
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 62/141 (43%), Gaps = 15/141 (10%)
Query: 24 VLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIH 83
+LA E+ G L L+ + G + GP+ + + + L YLHE IIH
Sbjct: 94 LLAMEYCEGGDLRKYLNQFENCCGLKEGPIRT------LLSDISSALRYLHEN---RIIH 144
Query: 84 RDIKSSNVLIF---DDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLN 140
RD+K N+++ + KI D A ++ T +GT Y APE +
Sbjct: 145 RDLKPENIVLQPGPQRLIHKIIDL---GYAKELDQGELCTEFVGTLQYLAPELLEQKKYT 201
Query: 141 AKSDVYSFGVVLLELLTGRKP 161
D +SFG + E +TG +P
Sbjct: 202 VTVDYWSFGTLAFECITGFRP 222
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 78/163 (47%), Gaps = 16/163 (9%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGR---KGVKGAQPGPVLSWQ 57
++ LKHEN V+L L +EF N L + R +G + V +Q
Sbjct: 56 LMKELKHENIVRLYDVIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQ 114
Query: 58 QRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARL 117
++ +GL + HE I+HRD+K N+LI K+ DF L+ +A +
Sbjct: 115 WQL------LQGLAFCHENK---ILHRDLKPQNLLINKRGQLKLGDFGLA-RAFGIPVNT 164
Query: 118 HSTRVLGTFGYHAPEYAMTGQLNAKS-DVYSFGVVLLELLTGR 159
S+ V+ T Y AP+ M + + S D++S G +L E++TG+
Sbjct: 165 FSSEVV-TLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 127
+GL+Y+H AD IIHRD+K SN+ + +D KI DF L+ D T + T
Sbjct: 143 RGLKYIH-SAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTAD-----EMTGYVATRW 194
Query: 128 YHAPEYAMTG-QLNAKSDVYSFGVVLLELLTGR 159
Y APE + N D++S G ++ ELLTGR
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 127
+GL+Y+H AD IIHRD+K SN+ + +D KI DF L+ D T + T
Sbjct: 143 RGLKYIH-SAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTAD-----EMTGYVATRW 194
Query: 128 YHAPEYAMTG-QLNAKSDVYSFGVVLLELLTGR 159
Y APE + N D++S G ++ ELLTGR
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 76/163 (46%), Gaps = 22/163 (13%)
Query: 5 LKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDIL--HGRKGVKGAQPGPVLSWQQRVKI 62
+H + ++L + + E+ S G L D + +GR L ++ ++
Sbjct: 73 FRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGR-----------LDEKESRRL 121
Query: 63 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRV 122
G++Y H ++HRD+K NVL+ AKIADF LSN D S
Sbjct: 122 FQQILSGVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSC-- 176
Query: 123 LGTFGYHAPEYAMTGQLNA--KSDVYSFGVVLLELLTGRKPVD 163
G+ Y APE ++G+L A + D++S GV+L LL G P D
Sbjct: 177 -GSPNYAAPE-VISGRLYAGPEVDIWSSGVILYALLCGTLPFD 217
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 127
+GL+Y+H AD IIHRD+K SN+ + +D KI DF L+ D T + T
Sbjct: 143 RGLKYIH-SAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTAD-----EMTGYVATRW 194
Query: 128 YHAPEYAMTG-QLNAKSDVYSFGVVLLELLTGR 159
Y APE + N D++S G ++ ELLTGR
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 72/153 (47%), Gaps = 13/153 (8%)
Query: 12 QLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLE 71
+LLG C+ T +++ + G L D + K G+Q +L+W V A+G+
Sbjct: 78 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQY--LLNW------CVQIAEGMN 128
Query: 72 YLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAP 131
YL D ++HRD+ + NVL+ KI DF L+ H+ + A
Sbjct: 129 YLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 185
Query: 132 EYAMTGQLNAKSDVYSFGVVLLELLT-GRKPVD 163
E + +SDV+S+GV + EL+T G KP D
Sbjct: 186 ESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 218
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 76/164 (46%), Gaps = 14/164 (8%)
Query: 1 MVSRLKHENFVQLLGYCVDGT-SRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQR 59
++ H N + LLG C+ S ++ + +G L R ++ P + +
Sbjct: 103 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL------RNFIRNETHNPTV--KDL 154
Query: 60 VKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAA-RLH 118
+ + AKG++YL K +HRD+ + N ++ + K+ADF L+ D +H
Sbjct: 155 IGFGLQVAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVH 211
Query: 119 S-TRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
+ T + A E T + KSDV+SFGV+L EL+T P
Sbjct: 212 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 255
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 127
+GL+Y+H AD IIHRD+K SN+ + +D KI DF L+ D T + T
Sbjct: 136 RGLKYIH-SAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRW 187
Query: 128 YHAPEYAMTG-QLNAKSDVYSFGVVLLELLTGR 159
Y APE + N D++S G ++ ELLTGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 127
+GL+Y+H AD IIHRD+K SN+ + +D KI DF L+ D T + T
Sbjct: 136 RGLKYIH-SAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRW 187
Query: 128 YHAPEYAMTG-QLNAKSDVYSFGVVLLELLTGR 159
Y APE + N D++S G ++ ELLTGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 127
+GL+Y+H AD IIHRD+K SN+ + +D KI DF L+ D T + T
Sbjct: 159 RGLKYIH-SAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRW 210
Query: 128 YHAPEYAMTG-QLNAKSDVYSFGVVLLELLTGR 159
Y APE + N D++S G ++ ELLTGR
Sbjct: 211 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 127
+GL+Y+H AD IIHRD+K SN+ + +D KI DF L+ D T + T
Sbjct: 138 RGLKYIH-SAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRW 189
Query: 128 YHAPEYAMTG-QLNAKSDVYSFGVVLLELLTGR 159
Y APE + N D++S G ++ ELLTGR
Sbjct: 190 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 127
+GL+Y+H AD IIHRD+K SN+ + +D KI DF L+ D T + T
Sbjct: 136 RGLKYIH-SAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRW 187
Query: 128 YHAPEYAMTG-QLNAKSDVYSFGVVLLELLTGR 159
Y APE + N D++S G ++ ELLTGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 127
+GL+Y+H AD IIHRD+K SN+ + +D KI DF L+ D T + T
Sbjct: 147 RGLKYIH-SAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRW 198
Query: 128 YHAPEYAMTG-QLNAKSDVYSFGVVLLELLTGR 159
Y APE + N D++S G ++ ELLTGR
Sbjct: 199 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 75/184 (40%), Gaps = 16/184 (8%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++SRL H FV+L D +A NG L + + G R
Sbjct: 85 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR--------KIGSFDETCTRF 136
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
A LEYLH K IIHRD+K N+L+ +D +I DF + + + +
Sbjct: 137 YTA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 192
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPK 180
+GT Y +PE SD+++ G ++ +L+ G P G + L+ K
Sbjct: 193 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP----FRAGNEGLIFAKIIK 248
Query: 181 LSED 184
L D
Sbjct: 249 LEYD 252
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 74/161 (45%), Gaps = 18/161 (11%)
Query: 5 LKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAV 64
+H + ++L T + E+ S G L D + + G V + R ++
Sbjct: 68 FRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYI--------CKHGRVEEMEAR-RLFQ 118
Query: 65 GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLG 124
++Y H ++HRD+K NVL+ AKIADF LSN D S G
Sbjct: 119 QILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSC---G 172
Query: 125 TFGYHAPEYAMTGQLNA--KSDVYSFGVVLLELLTGRKPVD 163
+ Y APE ++G+L A + D++S GV+L LL G P D
Sbjct: 173 SPNYAAPE-VISGRLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 127
+GL+Y+H AD IIHRD+K SN+ + +D KI DF L+ D T + T
Sbjct: 156 RGLKYIH-SAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRW 207
Query: 128 YHAPEYAMTG-QLNAKSDVYSFGVVLLELLTGR 159
Y APE + N D++S G ++ ELLTGR
Sbjct: 208 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 127
+GL+Y+H AD IIHRD+K SN+ + +D KI DF L+ D T + T
Sbjct: 156 RGLKYIH-SAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRW 207
Query: 128 YHAPEYAMTG-QLNAKSDVYSFGVVLLELLTGR 159
Y APE + N D++S G ++ ELLTGR
Sbjct: 208 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 75/184 (40%), Gaps = 16/184 (8%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++SRL H FV+L D +A NG L + + G R
Sbjct: 85 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR--------KIGSFDETCTRF 136
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
A LEYLH K IIHRD+K N+L+ +D +I DF + + + +
Sbjct: 137 YTA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 192
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPK 180
+GT Y +PE SD+++ G ++ +L+ G P G + L+ K
Sbjct: 193 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP----FRAGNEYLIFQKIIK 248
Query: 181 LSED 184
L D
Sbjct: 249 LEYD 252
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 127
+GL+Y+H AD IIHRD+K SN+ + +D KI DF L+ D T + T
Sbjct: 141 RGLKYIH-SAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRW 192
Query: 128 YHAPEYAMTG-QLNAKSDVYSFGVVLLELLTGR 159
Y APE + N D++S G ++ ELLTGR
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 127
+GL+Y+H AD IIHRD+K SN+ + +D KI DF L+ D T + T
Sbjct: 135 RGLKYIH-SAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRW 186
Query: 128 YHAPEYAMTG-QLNAKSDVYSFGVVLLELLTGR 159
Y APE + N D++S G ++ ELLTGR
Sbjct: 187 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 76/164 (46%), Gaps = 14/164 (8%)
Query: 1 MVSRLKHENFVQLLGYCVDGT-SRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQR 59
++ H N + LLG C+ S ++ + +G L R ++ P + +
Sbjct: 102 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL------RNFIRNETHNPTV--KDL 153
Query: 60 VKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAA-RLH 118
+ + AKG++YL K +HRD+ + N ++ + K+ADF L+ D +H
Sbjct: 154 IGFGLQVAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVH 210
Query: 119 S-TRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
+ T + A E T + KSDV+SFGV+L EL+T P
Sbjct: 211 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 254
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 127
+GL+Y+H AD IIHRD+K SN+ + +D KI DF L+ D T + T
Sbjct: 136 RGLKYIH-SAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRW 187
Query: 128 YHAPEYAMTG-QLNAKSDVYSFGVVLLELLTGR 159
Y APE + N D++S G ++ ELLTGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 127
+GL+Y+H AD IIHRD+K SN+ + +D KI DF L+ D T + T
Sbjct: 155 RGLKYIH-SAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRW 206
Query: 128 YHAPEYAMTG-QLNAKSDVYSFGVVLLELLTGR 159
Y APE + N D++S G ++ ELLTGR
Sbjct: 207 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 127
+GL+Y+H AD IIHRD+K SN+ + +D KI DF L+ D T + T
Sbjct: 155 RGLKYIH-SAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRW 206
Query: 128 YHAPEYAMTG-QLNAKSDVYSFGVVLLELLTGR 159
Y APE + N D++S G ++ ELLTGR
Sbjct: 207 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 76/164 (46%), Gaps = 14/164 (8%)
Query: 1 MVSRLKHENFVQLLGYCVDGT-SRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQR 59
++ H N + LLG C+ S ++ + +G L R ++ P + +
Sbjct: 83 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL------RNFIRNETHNPTV--KDL 134
Query: 60 VKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAA-RLH 118
+ + AKG++YL A +HRD+ + N ++ + K+ADF L+ D +H
Sbjct: 135 IGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVH 191
Query: 119 S-TRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
+ T + A E T + KSDV+SFGV+L EL+T P
Sbjct: 192 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 127
+GL+Y+H AD IIHRD+K SN+ + +D KI DF L+ D T + T
Sbjct: 136 RGLKYIH-SAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRW 187
Query: 128 YHAPEYAMTG-QLNAKSDVYSFGVVLLELLTGR 159
Y APE + N D++S G ++ ELLTGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 74/161 (45%), Gaps = 18/161 (11%)
Query: 5 LKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAV 64
+H + ++L T + E+ S G L D + + G V + R ++
Sbjct: 68 FRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYI--------CKHGRVEEMEAR-RLFQ 118
Query: 65 GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLG 124
++Y H ++HRD+K NVL+ AKIADF LSN D S G
Sbjct: 119 QILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSC---G 172
Query: 125 TFGYHAPEYAMTGQLNA--KSDVYSFGVVLLELLTGRKPVD 163
+ Y APE ++G+L A + D++S GV+L LL G P D
Sbjct: 173 SPNYAAPE-VISGRLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 65/143 (45%), Gaps = 21/143 (14%)
Query: 25 LAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHR 84
+ + +L D ++ R ++ + G L I + A+ +E+LH K ++HR
Sbjct: 138 IQMQLCRKENLKDWMNRRCSLEDREHGVCLH------IFIQIAEAVEFLHSKG---LMHR 188
Query: 85 DIKSSNVLIFDDDVAKIADFDLSNQ-----------APDMAARLHSTRVLGTFGYHAPEY 133
D+K SN+ DDV K+ DF L P A H +V GT Y +PE
Sbjct: 189 DLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQV-GTKLYMSPEQ 247
Query: 134 AMTGQLNAKSDVYSFGVVLLELL 156
+ K D++S G++L ELL
Sbjct: 248 IHGNNYSHKVDIFSLGLILFELL 270
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 127
+GL+Y+H AD IIHRD+K SN+ + +D KI DF L+ D T + T
Sbjct: 138 RGLKYIH-SAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRW 189
Query: 128 YHAPEYAMTG-QLNAKSDVYSFGVVLLELLTGR 159
Y APE + N D++S G ++ ELLTGR
Sbjct: 190 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 127
+GL+Y+H AD IIHRD+K SN+ + +D KI DF L+ D T + T
Sbjct: 136 RGLKYIH-SAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRW 187
Query: 128 YHAPEYAMTG-QLNAKSDVYSFGVVLLELLTGR 159
Y APE + N D++S G ++ ELLTGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 127
+GL+Y+H AD IIHRD+K SN+ + +D KI DF L+ D T + T
Sbjct: 142 RGLKYIH-SAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRW 193
Query: 128 YHAPEYAMTG-QLNAKSDVYSFGVVLLELLTGR 159
Y APE + N D++S G ++ ELLTGR
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 76/164 (46%), Gaps = 14/164 (8%)
Query: 1 MVSRLKHENFVQLLGYCVDGT-SRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQR 59
++ H N + LLG C+ S ++ + +G L R ++ P + +
Sbjct: 84 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL------RNFIRNETHNPTV--KDL 135
Query: 60 VKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAA-RLH 118
+ + AKG++YL K +HRD+ + N ++ + K+ADF L+ D +H
Sbjct: 136 IGFGLQVAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVH 192
Query: 119 S-TRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
+ T + A E T + KSDV+SFGV+L EL+T P
Sbjct: 193 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 76/164 (46%), Gaps = 14/164 (8%)
Query: 1 MVSRLKHENFVQLLGYCVDGT-SRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQR 59
++ H N + LLG C+ S ++ + +G L R ++ P + +
Sbjct: 81 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL------RNFIRNETHNPTV--KDL 132
Query: 60 VKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAA-RLH 118
+ + AKG++YL K +HRD+ + N ++ + K+ADF L+ D +H
Sbjct: 133 IGFGLQVAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVH 189
Query: 119 S-TRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
+ T + A E T + KSDV+SFGV+L EL+T P
Sbjct: 190 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 233
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 127
+GL+Y+H AD IIHRD+K SN+ + +D KI DF L+ D T + T
Sbjct: 143 RGLKYIH-SAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRW 194
Query: 128 YHAPEYAMTG-QLNAKSDVYSFGVVLLELLTGR 159
Y APE + N D++S G ++ ELLTGR
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 127
+GL+Y+H AD IIHRD+K SN+ + +D KI DF L+ D T + T
Sbjct: 136 RGLKYIH-SAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRW 187
Query: 128 YHAPEYAMTG-QLNAKSDVYSFGVVLLELLTGR 159
Y APE + N D++S G ++ ELLTGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 127
+GL+Y+H AD IIHRD+K SN+ + +D KI DF L+ D T + T
Sbjct: 136 RGLKYIH-SAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGXVATRW 187
Query: 128 YHAPEYAMTG-QLNAKSDVYSFGVVLLELLTGR 159
Y APE + N D++S G ++ ELLTGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 76/164 (46%), Gaps = 14/164 (8%)
Query: 1 MVSRLKHENFVQLLGYCVDGT-SRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQR 59
++ H N + LLG C+ S ++ + +G L R ++ P + +
Sbjct: 82 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL------RNFIRNETHNPTV--KDL 133
Query: 60 VKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAA-RLH 118
+ + AKG++YL A +HRD+ + N ++ + K+ADF L+ D +H
Sbjct: 134 IGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVH 190
Query: 119 S-TRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
+ T + A E T + KSDV+SFGV+L EL+T P
Sbjct: 191 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 75/184 (40%), Gaps = 16/184 (8%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++SRL H FV+L D +A NG L + + G R
Sbjct: 86 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR--------KIGSFDETCTRF 137
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
A LEYLH K IIHRD+K N+L+ +D +I DF + + + +
Sbjct: 138 YTA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 193
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPK 180
+GT Y +PE SD+++ G ++ +L+ G P G + L+ K
Sbjct: 194 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP----FRAGNEYLIFQKIIK 249
Query: 181 LSED 184
L D
Sbjct: 250 LEYD 253
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 76/164 (46%), Gaps = 14/164 (8%)
Query: 1 MVSRLKHENFVQLLGYCVDGT-SRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQR 59
++ H N + LLG C+ S ++ + +G L R ++ P + +
Sbjct: 76 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL------RNFIRNETHNPTV--KDL 127
Query: 60 VKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAA-RLH 118
+ + AKG++YL K +HRD+ + N ++ + K+ADF L+ D +H
Sbjct: 128 IGFGLQVAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVH 184
Query: 119 S-TRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
+ T + A E T + KSDV+SFGV+L EL+T P
Sbjct: 185 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 228
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 127
+GL+Y+H AD IIHRD+K SN+ + +D KI DF L+ D T + T
Sbjct: 146 RGLKYIH-SAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRW 197
Query: 128 YHAPEYAMTG-QLNAKSDVYSFGVVLLELLTGR 159
Y APE + N D++S G ++ ELLTGR
Sbjct: 198 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 127
+GL+Y+H AD IIHRD+K SN+ + +D KI DF L+ D T + T
Sbjct: 134 RGLKYIH-SAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRW 185
Query: 128 YHAPEYAMTG-QLNAKSDVYSFGVVLLELLTGR 159
Y APE + N D++S G ++ ELLTGR
Sbjct: 186 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 127
+GL+Y+H AD IIHRD+K SN+ + +D KI DF L+ D T + T
Sbjct: 148 RGLKYIH-SAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRW 199
Query: 128 YHAPEYAMTG-QLNAKSDVYSFGVVLLELLTGR 159
Y APE + N D++S G ++ ELLTGR
Sbjct: 200 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 76/164 (46%), Gaps = 14/164 (8%)
Query: 1 MVSRLKHENFVQLLGYCVDGT-SRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQR 59
++ H N + LLG C+ S ++ + +G L R ++ P + +
Sbjct: 79 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL------RNFIRNETHNPTV--KDL 130
Query: 60 VKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAA-RLH 118
+ + AKG++YL K +HRD+ + N ++ + K+ADF L+ D +H
Sbjct: 131 IGFGLQVAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVH 187
Query: 119 S-TRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
+ T + A E T + KSDV+SFGV+L EL+T P
Sbjct: 188 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 231
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 75/184 (40%), Gaps = 16/184 (8%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++SRL H FV+L D +A NG L + + G R
Sbjct: 86 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR--------KIGSFDETCTRF 137
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
A LEYLH K IIHRD+K N+L+ +D +I DF + + + +
Sbjct: 138 YTA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 193
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPK 180
+GT Y +PE SD+++ G ++ +L+ G P G + L+ K
Sbjct: 194 SFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP----FRAGNEYLIFQKIIK 249
Query: 181 LSED 184
L D
Sbjct: 250 LEYD 253
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 127
+GL+Y+H AD IIHRD+K SN+ + +D KI DF L+ D T + T
Sbjct: 132 RGLKYIH-SAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRW 183
Query: 128 YHAPEYAMTG-QLNAKSDVYSFGVVLLELLTGR 159
Y APE + N D++S G ++ ELLTGR
Sbjct: 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 76/164 (46%), Gaps = 14/164 (8%)
Query: 1 MVSRLKHENFVQLLGYCVDGT-SRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQR 59
++ H N + LLG C+ S ++ + +G L R ++ P + +
Sbjct: 84 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL------RNFIRNETHNPTV--KDL 135
Query: 60 VKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAA-RLH 118
+ + AKG++YL A +HRD+ + N ++ + K+ADF L+ D +H
Sbjct: 136 IGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVH 192
Query: 119 S-TRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
+ T + A E T + KSDV+SFGV+L EL+T P
Sbjct: 193 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 127
+GL+Y+H AD IIHRD+K SN+ + +D KI DF L+ D T + T
Sbjct: 148 RGLKYIH-SAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRW 199
Query: 128 YHAPEYAMTG-QLNAKSDVYSFGVVLLELLTGR 159
Y APE + N D++S G ++ ELLTGR
Sbjct: 200 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 127
+GL+Y+H AD IIHRD+K SN+ + +D KI DF L+ D T + T
Sbjct: 148 RGLKYIH-SAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRW 199
Query: 128 YHAPEYAMTG-QLNAKSDVYSFGVVLLELLTGR 159
Y APE + N D++S G ++ ELLTGR
Sbjct: 200 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 75/184 (40%), Gaps = 16/184 (8%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++SRL H FV+L D +A NG L + + G R
Sbjct: 62 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR--------KIGSFDETCTRF 113
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
A LEYLH K IIHRD+K N+L+ +D +I DF + + + +
Sbjct: 114 YTA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 169
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPK 180
+GT Y +PE SD+++ G ++ +L+ G P G + L+ K
Sbjct: 170 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP----FRAGNEYLIFQKIIK 225
Query: 181 LSED 184
L D
Sbjct: 226 LEYD 229
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 75/184 (40%), Gaps = 16/184 (8%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++SRL H FV+L D +A NG L + + G R
Sbjct: 63 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR--------KIGSFDETCTRF 114
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
A LEYLH K IIHRD+K N+L+ +D +I DF + + + +
Sbjct: 115 YTA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 170
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPK 180
+GT Y +PE SD+++ G ++ +L+ G P G + L+ K
Sbjct: 171 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA----GNEYLIFQKIIK 226
Query: 181 LSED 184
L D
Sbjct: 227 LEYD 230
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 127
+GL+Y+H AD IIHRD+K SN+ + +D KI DF L+ D T + T
Sbjct: 138 RGLKYIH-SAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRW 189
Query: 128 YHAPEYAMTG-QLNAKSDVYSFGVVLLELLTGR 159
Y APE + N D++S G ++ ELLTGR
Sbjct: 190 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 75/184 (40%), Gaps = 16/184 (8%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++SRL H FV+L D +A NG L + + G R
Sbjct: 90 VMSRLDHPFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIR--------KIGSFDETCTRF 141
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
A LEYLH K IIHRD+K N+L+ +D +I DF + + + +
Sbjct: 142 YTA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 197
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPK 180
+GT Y +PE SD+++ G ++ +L+ G P G + L+ K
Sbjct: 198 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP----FRAGNEYLIFQKIIK 253
Query: 181 LSED 184
L D
Sbjct: 254 LEYD 257
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 127
+GL+Y+H AD IIHRD+K SN+ + +D KI DF L+ D T + T
Sbjct: 132 RGLKYIH-SAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRW 183
Query: 128 YHAPEYAMTG-QLNAKSDVYSFGVVLLELLTGR 159
Y APE + N D++S G ++ ELLTGR
Sbjct: 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 127
+GL+Y+H AD IIHRD+K SN+ + +D KI DF L+ D T + T
Sbjct: 141 RGLKYIH-SAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRW 192
Query: 128 YHAPEYAMTG-QLNAKSDVYSFGVVLLELLTGR 159
Y APE + N D++S G ++ ELLTGR
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 75/184 (40%), Gaps = 16/184 (8%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++SRL H FV+L D +A NG L + + G R
Sbjct: 85 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR--------KIGSFDETCTRF 136
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
A LEYLH K IIHRD+K N+L+ +D +I DF + + + +
Sbjct: 137 YTA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 192
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPK 180
+GT Y +PE SD+++ G ++ +L+ G P G + L+ K
Sbjct: 193 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP----FRAGNEYLIFQKIIK 248
Query: 181 LSED 184
L D
Sbjct: 249 LEYD 252
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 127
+GL+Y+H AD IIHRD+K SN+ + +D KI DF L+ D T + T
Sbjct: 136 RGLKYIH-SAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRW 187
Query: 128 YHAPEYAMTG-QLNAKSDVYSFGVVLLELLTGR 159
Y APE + N D++S G ++ ELLTGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 127
+GL+Y+H AD IIHRD+K SN+ + +D KI DF L+ D T + T
Sbjct: 136 RGLKYIH-SAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRW 187
Query: 128 YHAPEYAMTG-QLNAKSDVYSFGVVLLELLTGR 159
Y APE + N D++S G ++ ELLTGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 127
+GL+Y+H AD IIHRD+K SN+ + +D KI DF L+ D T + T
Sbjct: 132 RGLKYIH-SAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRW 183
Query: 128 YHAPEYAMTG-QLNAKSDVYSFGVVLLELLTGR 159
Y APE + N D++S G ++ ELLTGR
Sbjct: 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 75/184 (40%), Gaps = 16/184 (8%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++SRL H FV+L D +A NG L + + G R
Sbjct: 88 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR--------KIGSFDETCTRF 139
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
A LEYLH K IIHRD+K N+L+ +D +I DF + + + +
Sbjct: 140 YTA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 195
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPK 180
+GT Y +PE SD+++ G ++ +L+ G P G + L+ K
Sbjct: 196 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP----FRAGNEYLIFQKIIK 251
Query: 181 LSED 184
L D
Sbjct: 252 LEYD 255
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 127
+GL+Y+H AD IIHRD+K SN+ + +D KI DF L+ D T + T
Sbjct: 133 RGLKYIH-SAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRW 184
Query: 128 YHAPEYAMTG-QLNAKSDVYSFGVVLLELLTGR 159
Y APE + N D++S G ++ ELLTGR
Sbjct: 185 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 75/184 (40%), Gaps = 16/184 (8%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++SRL H FV+L D +A NG L + + G R
Sbjct: 85 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR--------KIGSFDETCTRF 136
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
A LEYLH K IIHRD+K N+L+ +D +I DF + + + +
Sbjct: 137 YTA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 192
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPK 180
+GT Y +PE SD+++ G ++ +L+ G P G + L+ K
Sbjct: 193 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP----FRAGNEYLIFQKIIK 248
Query: 181 LSED 184
L D
Sbjct: 249 LEYD 252
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 127
+GL+Y+H AD IIHRD+K SN+ + +D KI DF L+ D T + T
Sbjct: 133 RGLKYIH-SAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRW 184
Query: 128 YHAPEYAMTG-QLNAKSDVYSFGVVLLELLTGR 159
Y APE + N D++S G ++ ELLTGR
Sbjct: 185 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 75/184 (40%), Gaps = 16/184 (8%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++SRL H FV+L D +A NG L + + G R
Sbjct: 83 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR--------KIGSFDETCTRF 134
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
A LEYLH K IIHRD+K N+L+ +D +I DF + + + +
Sbjct: 135 YTA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 190
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPK 180
+GT Y +PE SD+++ G ++ +L+ G P G + L+ K
Sbjct: 191 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP----FRAGNEYLIFQKIIK 246
Query: 181 LSED 184
L D
Sbjct: 247 LEYD 250
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 75/184 (40%), Gaps = 16/184 (8%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++SRL H FV+L D +A NG L + + G R
Sbjct: 83 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR--------KIGSFDETCTRF 134
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
A LEYLH K IIHRD+K N+L+ +D +I DF + + + +
Sbjct: 135 YTA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 190
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPK 180
+GT Y +PE SD+++ G ++ +L+ G P G + L+ K
Sbjct: 191 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP----FRAGNEYLIFQKIIK 246
Query: 181 LSED 184
L D
Sbjct: 247 LEYD 250
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 127
+GL+Y+H AD IIHRD+K SN+ + +D KI DF L+ D T + T
Sbjct: 142 RGLKYIH-SAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRW 193
Query: 128 YHAPEYAMTG-QLNAKSDVYSFGVVLLELLTGR 159
Y APE + N D++S G ++ ELLTGR
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 75/184 (40%), Gaps = 16/184 (8%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++SRL H FV+L D +A NG L + + G R
Sbjct: 61 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR--------KIGSFDETCTRF 112
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
A LEYLH K IIHRD+K N+L+ +D +I DF + + + +
Sbjct: 113 YTA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 168
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPK 180
+GT Y +PE SD+++ G ++ +L+ G P G + L+ K
Sbjct: 169 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP----FRAGNEYLIFQKIIK 224
Query: 181 LSED 184
L D
Sbjct: 225 LEYD 228
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 68/132 (51%), Gaps = 11/132 (8%)
Query: 29 FASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKS 88
F + SL D+ + G P+ + + + + A+G+E+L + IHRD+ +
Sbjct: 173 FQEDKSLSDV-EEEEDSDGFYKEPI-TMEDLISYSFQVARGMEFLSSR---KCIHRDLAA 227
Query: 89 SNVLIFDDDVAKIADFDLSN---QAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDV 145
N+L+ +++V KI DF L+ + PD R TR+ + APE + KSDV
Sbjct: 228 RNILLSENNVVKICDFGLARDIYKNPDY-VRKGDTRL--PLKWMAPESIFDKIYSTKSDV 284
Query: 146 YSFGVVLLELLT 157
+S+GV+L E+ +
Sbjct: 285 WSYGVLLWEIFS 296
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 127
+GL+Y+H AD IIHRD+K SN+ + +D KI DF L+ D T + T
Sbjct: 142 RGLKYIH-SAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRW 193
Query: 128 YHAPEYAMTG-QLNAKSDVYSFGVVLLELLTGR 159
Y APE + N D++S G ++ ELLTGR
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 75/184 (40%), Gaps = 16/184 (8%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++SRL H FV+L D +A NG L + + G R
Sbjct: 60 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR--------KIGSFDETCTRF 111
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
A LEYLH K IIHRD+K N+L+ +D +I DF + + + +
Sbjct: 112 YTA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 167
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPK 180
+GT Y +PE SD+++ G ++ +L+ G P G + L+ K
Sbjct: 168 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP----FRAGNEYLIFQKIIK 223
Query: 181 LSED 184
L D
Sbjct: 224 LEYD 227
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 75/184 (40%), Gaps = 16/184 (8%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++SRL H FV+L D +A NG L + + G R
Sbjct: 83 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR--------KIGSFDETCTRF 134
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
A LEYLH K IIHRD+K N+L+ +D +I DF + + + +
Sbjct: 135 YTA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 190
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPK 180
+GT Y +PE SD+++ G ++ +L+ G P G + L+ K
Sbjct: 191 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP----FRAGNEYLIFQKIIK 246
Query: 181 LSED 184
L D
Sbjct: 247 LEYD 250
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 75/184 (40%), Gaps = 16/184 (8%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++SRL H FV+L D +A NG L + + G R
Sbjct: 83 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR--------KIGSFDETCTRF 134
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
A LEYLH K IIHRD+K N+L+ +D +I DF + + + +
Sbjct: 135 YTA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 190
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPK 180
+GT Y +PE SD+++ G ++ +L+ G P G + L+ K
Sbjct: 191 AFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP----FRAGNEYLIFQKIIK 246
Query: 181 LSED 184
L D
Sbjct: 247 LEYD 250
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 75/184 (40%), Gaps = 16/184 (8%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++SRL H FV+L D +A NG L + + G R
Sbjct: 82 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR--------KIGSFDETCTRF 133
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
A LEYLH K IIHRD+K N+L+ +D +I DF + + + +
Sbjct: 134 YTA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 189
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPK 180
+GT Y +PE SD+++ G ++ +L+ G P G + L+ K
Sbjct: 190 SFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP----FRAGNEYLIFQKIIK 245
Query: 181 LSED 184
L D
Sbjct: 246 LEYD 249
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 127
+GL+Y+H AD IIHRD+K SN+ + +D KI DF L+ D T + T
Sbjct: 136 RGLKYIH-SAD--IIHRDLKPSNLAVNEDCELKILDFYLARHTDD-----EMTGYVATRW 187
Query: 128 YHAPEYAMTG-QLNAKSDVYSFGVVLLELLTGR 159
Y APE + N D++S G ++ ELLTGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 75/184 (40%), Gaps = 16/184 (8%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++SRL H FV+L D +A NG L + + G R
Sbjct: 67 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR--------KIGSFDETCTRF 118
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
A LEYLH K IIHRD+K N+L+ +D +I DF + + + +
Sbjct: 119 YTA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 174
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPK 180
+GT Y +PE SD+++ G ++ +L+ G P G + L+ K
Sbjct: 175 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP----FRAGNEYLIFQKIIK 230
Query: 181 LSED 184
L D
Sbjct: 231 LEYD 234
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 75/184 (40%), Gaps = 16/184 (8%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++SRL H FV+L D +A NG L + + G R
Sbjct: 82 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR--------KIGSFDETCTRF 133
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
A LEYLH K IIHRD+K N+L+ +D +I DF + + + +
Sbjct: 134 YTA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 189
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPK 180
+GT Y +PE SD+++ G ++ +L+ G P G + L+ K
Sbjct: 190 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP----FRAGNEYLIFQKIIK 245
Query: 181 LSED 184
L D
Sbjct: 246 LEYD 249
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 77/164 (46%), Gaps = 13/164 (7%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
+++ + + + +LLG C+ T +++ + G L D + K G+Q +L+W
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQY--LLNW---- 124
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
V AKG+ YL D ++HRD+ + NVL+ KI DF + H+
Sbjct: 125 --CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAE 179
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKPVD 163
+ A E + +SDV+S+GV + EL+T G KP D
Sbjct: 180 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 77/164 (46%), Gaps = 13/164 (7%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
+++ + + + +LLG C+ T +++ + G L D + K G+Q +L+W
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQY--LLNW---- 122
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
V AKG+ YL D ++HRD+ + NVL+ KI DF + H+
Sbjct: 123 --CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAE 177
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKPVD 163
+ A E + +SDV+S+GV + EL+T G KP D
Sbjct: 178 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 61/134 (45%), Gaps = 12/134 (8%)
Query: 25 LAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHR 84
L E+ +G L D L + A + S Q KG+EYL + +HR
Sbjct: 87 LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQ--------ICKGMEYLGSR---RCVHR 135
Query: 85 DIKSSNVLIFDDDVAKIADFDLSNQAP-DMAARLHSTRVLGTFGYHAPEYAMTGQLNAKS 143
D+ + N+L+ + KIADF L+ P D + ++APE + +S
Sbjct: 136 DLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFSRQS 195
Query: 144 DVYSFGVVLLELLT 157
DV+SFGVVL EL T
Sbjct: 196 DVWSFGVVLYELFT 209
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 80/175 (45%), Gaps = 24/175 (13%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPV------- 53
++ ++ H + ++L G C +L E+A GSL L + V PG +
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVG---PGYLGSGGSRN 135
Query: 54 -----------LSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIA 102
L+ + A ++G++YL A+ ++HRD+ + N+L+ + KI+
Sbjct: 136 SSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKIS 192
Query: 103 DFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT 157
DF LS + + + ++ + A E +SDV+SFGV+L E++T
Sbjct: 193 DFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 127
+GL+Y+H AD IIHRD+K SN+ + +D KI DF L+ D +TR
Sbjct: 156 RGLKYIH-SAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGXVATR-----W 207
Query: 128 YHAPEYAMTG-QLNAKSDVYSFGVVLLELLTGR 159
Y APE + N D++S G ++ ELLTGR
Sbjct: 208 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 80/175 (45%), Gaps = 24/175 (13%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPV------- 53
++ ++ H + ++L G C +L E+A GSL L + V PG +
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVG---PGYLGSGGSRN 135
Query: 54 -----------LSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIA 102
L+ + A ++G++YL E + ++HRD+ + N+L+ + KI+
Sbjct: 136 SSSLDHPDERALTMGDLISFAWQISQGMQYLAEMS---LVHRDLAARNILVAEGRKMKIS 192
Query: 103 DFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT 157
DF LS + + + ++ + A E +SDV+SFGV+L E++T
Sbjct: 193 DFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 127
+GL+Y+H AD IIHRD+K SN+ + +D KI DF L+ D +TR
Sbjct: 159 RGLKYIH-SAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVATR-----W 210
Query: 128 YHAPEYAMTG-QLNAKSDVYSFGVVLLELLTGR 159
Y APE + N D++S G ++ ELLTGR
Sbjct: 211 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 68/161 (42%), Gaps = 14/161 (8%)
Query: 2 VSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVK 61
+ + H + V+L+G + ++ E + G L L RK L +
Sbjct: 65 MRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQVRKFS--------LDLASLIL 115
Query: 62 IAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTR 121
A + L YL K +HRDI + NVL+ +D K+ DF LS D S
Sbjct: 116 YAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKG 172
Query: 122 VLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
L + APE + + SDV+ FGV + E+L G KP
Sbjct: 173 KL-PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 212
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 77/164 (46%), Gaps = 13/164 (7%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
+++ + + + +LLG C+ T +++ + G L D + K G+Q +L+W
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQY--LLNW---- 129
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
V AKG+ YL D ++HRD+ + NVL+ KI DF + H+
Sbjct: 130 --CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAE 184
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKPVD 163
+ A E + +SDV+S+GV + EL+T G KP D
Sbjct: 185 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 74/182 (40%), Gaps = 15/182 (8%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ L H N +++ D + + E G L + + V G LS
Sbjct: 73 VLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLE-----RIVSAQARGKALSEGYVA 127
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDV---AKIADFDLSNQAPDMAARL 117
++ L Y H + H++H+D+K N+L D KI DF L A +
Sbjct: 128 ELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGL---AELFKSDE 181
Query: 118 HSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWA 177
HST GT Y APE + K D++S GVV+ LLTG P T Q T+
Sbjct: 182 HSTNAAGTALYMAPE-VFKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYK 240
Query: 178 TP 179
P
Sbjct: 241 EP 242
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 70/153 (45%), Gaps = 13/153 (8%)
Query: 12 QLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLE 71
+LLG C+ T + L + G L D + K G+Q +L+W V AKG+
Sbjct: 85 RLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQY--LLNW------CVQIAKGMN 135
Query: 72 YLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAP 131
YL D ++HRD+ + NVL+ KI DF + H+ + A
Sbjct: 136 YLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMAL 192
Query: 132 EYAMTGQLNAKSDVYSFGVVLLELLT-GRKPVD 163
E + +SDV+S+GV + EL+T G KP D
Sbjct: 193 ESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 74/165 (44%), Gaps = 19/165 (11%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ ++ H N + L + T VL E S G L D L ++ LS ++
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES---------LSEEEAT 118
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDV----AKIADFDLSNQAPDMAAR 116
G+ YLH K I H D+K N+++ D ++ K+ DF L+++ D
Sbjct: 119 SFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED---G 172
Query: 117 LHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
+ + GT + APE L ++D++S GV+ LL+G P
Sbjct: 173 VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 63/135 (46%), Gaps = 14/135 (10%)
Query: 25 LAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHR 84
L E+ +G L D L + A + S Q KG+EYL + +HR
Sbjct: 91 LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQ--------ICKGMEYLGSR---RCVHR 139
Query: 85 DIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGT--FGYHAPEYAMTGQLNAK 142
D+ + N+L+ + KIADF L+ P + + R G ++APE + +
Sbjct: 140 DLAARNILVESEAHVKIADFGLAKLLP-LDKDYYVVREPGQSPIFWYAPESLSDNIFSRQ 198
Query: 143 SDVYSFGVVLLELLT 157
SDV+SFGVVL EL T
Sbjct: 199 SDVWSFGVVLYELFT 213
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 73/167 (43%), Gaps = 28/167 (16%)
Query: 5 LKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAV 64
L+ NFV+ + ++ + E+ NG+L+D++H + W+ +I
Sbjct: 72 LERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDE----YWRLFRQIL- 126
Query: 65 GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDL--------------SNQA 110
+ L Y+H + IIHRD+K N+ I + KI DF L S
Sbjct: 127 ---EALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 111 PDMAARLHSTRVLGTFGYHAPEYA-MTGQLNAKSDVYSFGVVLLELL 156
P + L T +GT Y A E TG N K D+YS G++ E++
Sbjct: 181 PGSSDNL--TSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 76/164 (46%), Gaps = 13/164 (7%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
+++ + + + +LLG C+ T + L + G L D + K G+Q +L+W
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQY--LLNW---- 124
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
V AKG+ YL D ++HRD+ + NVL+ KI DF + H+
Sbjct: 125 --CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAE 179
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKPVD 163
+ A E + +SDV+S+GV + EL+T G KP D
Sbjct: 180 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 63/135 (46%), Gaps = 14/135 (10%)
Query: 25 LAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHR 84
L E+ +G L D L + A + S Q KG+EYL + +HR
Sbjct: 90 LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQ--------ICKGMEYLGSR---RCVHR 138
Query: 85 DIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGT--FGYHAPEYAMTGQLNAK 142
D+ + N+L+ + KIADF L+ P + + R G ++APE + +
Sbjct: 139 DLAARNILVESEAHVKIADFGLAKLLP-LDKDYYVVREPGQSPIFWYAPESLSDNIFSRQ 197
Query: 143 SDVYSFGVVLLELLT 157
SDV+SFGVVL EL T
Sbjct: 198 SDVWSFGVVLYELFT 212
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 75/164 (45%), Gaps = 14/164 (8%)
Query: 1 MVSRLKHENFVQLLGYCVDGT-SRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQR 59
++ H N + LLG C+ S ++ + +G L R ++ P + +
Sbjct: 89 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL------RNFIRNETHNPTV--KDL 140
Query: 60 VKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD--MAARL 117
+ + AKG+++L K +HRD+ + N ++ + K+ADF L+ D +
Sbjct: 141 IGFGLQVAKGMKFLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVH 197
Query: 118 HSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
+ T + A E T + KSDV+SFGV+L EL+T P
Sbjct: 198 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 241
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 76/164 (46%), Gaps = 13/164 (7%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
+++ + + + +LLG C+ T + L + G L D + K G+Q +L+W
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQY--LLNW---- 124
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
V AKG+ YL D ++HRD+ + NVL+ KI DF + H+
Sbjct: 125 --CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAE 179
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKPVD 163
+ A E + +SDV+S+GV + EL+T G KP D
Sbjct: 180 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 63/135 (46%), Gaps = 14/135 (10%)
Query: 25 LAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHR 84
L E+ +G L D L + A + S Q KG+EYL + +HR
Sbjct: 103 LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQ--------ICKGMEYLGSR---RCVHR 151
Query: 85 DIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGT--FGYHAPEYAMTGQLNAK 142
D+ + N+L+ + KIADF L+ P + + R G ++APE + +
Sbjct: 152 DLAARNILVESEAHVKIADFGLAKLLP-LDKDYYVVREPGQSPIFWYAPESLSDNIFSRQ 210
Query: 143 SDVYSFGVVLLELLT 157
SDV+SFGVVL EL T
Sbjct: 211 SDVWSFGVVLYELFT 225
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 80/175 (45%), Gaps = 24/175 (13%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPV------- 53
++ ++ H + ++L G C +L E+A GSL L + V PG +
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVG---PGYLGSGGSRN 135
Query: 54 -----------LSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIA 102
L+ + A ++G++YL A+ ++HRD+ + N+L+ + KI+
Sbjct: 136 SSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKIS 192
Query: 103 DFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT 157
DF LS + + + ++ + A E +SDV+SFGV+L E++T
Sbjct: 193 DFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 75/164 (45%), Gaps = 14/164 (8%)
Query: 1 MVSRLKHENFVQLLGYCVDGT-SRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQR 59
++ H N + LLG C+ S ++ + +G L R ++ P + +
Sbjct: 84 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL------RNFIRNETHNPTV--KDL 135
Query: 60 VKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD--MAARL 117
+ + AKG+++L K +HRD+ + N ++ + K+ADF L+ D +
Sbjct: 136 IGFGLQVAKGMKFLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVH 192
Query: 118 HSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
+ T + A E T + KSDV+SFGV+L EL+T P
Sbjct: 193 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 75/164 (45%), Gaps = 14/164 (8%)
Query: 1 MVSRLKHENFVQLLGYCVDGT-SRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQR 59
++ H N + LLG C+ S ++ + +G L R ++ P + +
Sbjct: 85 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL------RNFIRNETHNPTV--KDL 136
Query: 60 VKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD--MAARL 117
+ + AKG+++L A +HRD+ + N ++ + K+ADF L+ D +
Sbjct: 137 IGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVH 193
Query: 118 HSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
+ T + A E T + KSDV+SFGV+L EL+T P
Sbjct: 194 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 75/164 (45%), Gaps = 14/164 (8%)
Query: 1 MVSRLKHENFVQLLGYCVDGT-SRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQR 59
++ H N + LLG C+ S ++ + +G L R ++ P + +
Sbjct: 84 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL------RNFIRNETHNPTV--KDL 135
Query: 60 VKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD--MAARL 117
+ + AKG+++L A +HRD+ + N ++ + K+ADF L+ D +
Sbjct: 136 IGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVH 192
Query: 118 HSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
+ T + A E T + KSDV+SFGV+L EL+T P
Sbjct: 193 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 75/164 (45%), Gaps = 14/164 (8%)
Query: 1 MVSRLKHENFVQLLGYCVDGT-SRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQR 59
++ H N + LLG C+ S ++ + +G L R ++ P + +
Sbjct: 143 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL------RNFIRNETHNPTV--KDL 194
Query: 60 VKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD--MAARL 117
+ + AKG+++L K +HRD+ + N ++ + K+ADF L+ D +
Sbjct: 195 IGFGLQVAKGMKFLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVH 251
Query: 118 HSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
+ T + A E T + KSDV+SFGV+L EL+T P
Sbjct: 252 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 295
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 77/170 (45%), Gaps = 31/170 (18%)
Query: 5 LKHENFVQLLGYCVDGTSR----VLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++HEN + + + GT L ++ NGSL+D L L + +
Sbjct: 88 MRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKS----------TTLDAKSML 137
Query: 61 KIAVGAAKGLEYLHE-----KADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAA 115
K+A + GL +LH + P I HRD+KS N+L+ + IAD L+ +
Sbjct: 138 KLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTN 197
Query: 116 RLH---STRVLGTFGYHAPEYAMTGQLNAK-------SDVYSFGVVLLEL 155
+ +TRV GT Y PE + LN +D+YSFG++L E+
Sbjct: 198 EVDIPPNTRV-GTKRYMPPE-VLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 75/164 (45%), Gaps = 14/164 (8%)
Query: 1 MVSRLKHENFVQLLGYCVDGT-SRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQR 59
++ H N + LLG C+ S ++ + +G L R ++ P + +
Sbjct: 85 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL------RNFIRNETHNPTV--KDL 136
Query: 60 VKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD--MAARL 117
+ + AKG+++L A +HRD+ + N ++ + K+ADF L+ D +
Sbjct: 137 IGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVH 193
Query: 118 HSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
+ T + A E T + KSDV+SFGV+L EL+T P
Sbjct: 194 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 75/164 (45%), Gaps = 14/164 (8%)
Query: 1 MVSRLKHENFVQLLGYCVDGT-SRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQR 59
++ H N + LLG C+ S ++ + +G L R ++ P + +
Sbjct: 82 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL------RNFIRNETHNPTV--KDL 133
Query: 60 VKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD--MAARL 117
+ + AKG+++L K +HRD+ + N ++ + K+ADF L+ D +
Sbjct: 134 IGFGLQVAKGMKFLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVH 190
Query: 118 HSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
+ T + A E T + KSDV+SFGV+L EL+T P
Sbjct: 191 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 74/165 (44%), Gaps = 19/165 (11%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ ++ H N + L + T VL E S G L D L ++ LS ++
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES---------LSEEEAT 118
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDV----AKIADFDLSNQAPDMAAR 116
G+ YLH K I H D+K N+++ D ++ K+ DF L+++ D
Sbjct: 119 SFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED---G 172
Query: 117 LHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
+ + GT + APE L ++D++S GV+ LL+G P
Sbjct: 173 VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 74/165 (44%), Gaps = 19/165 (11%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ ++ H N + L + T VL E S G L D L ++ LS ++
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES---------LSEEEAT 118
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDV----AKIADFDLSNQAPDMAAR 116
G+ YLH K I H D+K N+++ D ++ K+ DF L+++ D
Sbjct: 119 SFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED---G 172
Query: 117 LHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
+ + GT + APE L ++D++S GV+ LL+G P
Sbjct: 173 VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 77/161 (47%), Gaps = 17/161 (10%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ L H N V L+ L +EF + + G++ +Q +
Sbjct: 72 LLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQ----------I 121
Query: 61 KIAV-GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHS 119
KI + +G+ + H+ I+HRD+K N+LI D K+ADF L+ +A + R ++
Sbjct: 122 KIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLA-RAFGIPVRSYT 177
Query: 120 TRVLGTFGYHAPEYAM-TGQLNAKSDVYSFGVVLLELLTGR 159
V+ T Y AP+ M + + + D++S G + E++TG+
Sbjct: 178 HEVV-TLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 127
+GL+Y+H AD IIHRD+K SN+ + +D KI D+ L+ D T + T
Sbjct: 136 RGLKYIH-SAD--IIHRDLKPSNLAVNEDCELKILDYGLARHTDD-----EMTGYVATRW 187
Query: 128 YHAPEYAMTG-QLNAKSDVYSFGVVLLELLTGR 159
Y APE + N D++S G ++ ELLTGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 77/161 (47%), Gaps = 17/161 (10%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ L H N V L+ L +EF + + G++ +Q +
Sbjct: 72 LLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQ----------I 121
Query: 61 KIAV-GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHS 119
KI + +G+ + H+ I+HRD+K N+LI D K+ADF L+ +A + R ++
Sbjct: 122 KIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLA-RAFGIPVRSYT 177
Query: 120 TRVLGTFGYHAPEYAM-TGQLNAKSDVYSFGVVLLELLTGR 159
V+ T Y AP+ M + + + D++S G + E++TG+
Sbjct: 178 HEVV-TLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 70/161 (43%), Gaps = 14/161 (8%)
Query: 2 VSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVK 61
+ + H + V+L+G + ++ E + G L L RK L +
Sbjct: 93 MRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQVRKYS--------LDLASLIL 143
Query: 62 IAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTR 121
A + L YL K +HRDI + NVL+ +D K+ DF LS D + +++
Sbjct: 144 YAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED-STYYKASK 199
Query: 122 VLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
+ APE + + SDV+ FGV + E+L G KP
Sbjct: 200 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 240
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 70/161 (43%), Gaps = 14/161 (8%)
Query: 2 VSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVK 61
+ + H + V+L+G + ++ E + G L L RK L +
Sbjct: 70 MRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQVRKYS--------LDLASLIL 120
Query: 62 IAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTR 121
A + L YL K +HRDI + NVL+ +D K+ DF LS D + +++
Sbjct: 121 YAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED-STYYKASK 176
Query: 122 VLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
+ APE + + SDV+ FGV + E+L G KP
Sbjct: 177 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 217
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 72/155 (46%), Gaps = 15/155 (9%)
Query: 10 FVQLLGYCVDGTSRV-LAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAK 68
F+ L C R+ E+ + G L + H ++ K +P Q V A +
Sbjct: 81 FLTQLHSCFQTVDRLYFVMEYVNGGDL--MYHIQQVGKFKEP-------QAVFYAAEISI 131
Query: 69 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 128
GL +LH++ II+RD+K NV++ + KIADF + + M + + GT Y
Sbjct: 132 GLFFLHKRG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEH--MMDGVTTREFCGTPDY 186
Query: 129 HAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVD 163
APE D +++GV+L E+L G+ P D
Sbjct: 187 IAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFD 221
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 70/161 (43%), Gaps = 14/161 (8%)
Query: 2 VSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVK 61
+ + H + V+L+G + ++ E + G L L RK L +
Sbjct: 62 MRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQVRKYS--------LDLASLIL 112
Query: 62 IAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTR 121
A + L YL K +HRDI + NVL+ +D K+ DF LS D + +++
Sbjct: 113 YAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED-STYYKASK 168
Query: 122 VLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
+ APE + + SDV+ FGV + E+L G KP
Sbjct: 169 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 209
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 74/165 (44%), Gaps = 19/165 (11%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ ++ H N + L + T VL E S G L D L ++ LS ++
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES---------LSEEEAT 118
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDV----AKIADFDLSNQAPDMAAR 116
G+ YLH K I H D+K N+++ D ++ K+ DF L+++ D
Sbjct: 119 SFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG--- 172
Query: 117 LHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
+ + GT + APE L ++D++S GV+ LL+G P
Sbjct: 173 VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 74/165 (44%), Gaps = 19/165 (11%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ ++ H N + L + T VL E S G L D L ++ LS ++
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES---------LSEEEAT 118
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDV----AKIADFDLSNQAPDMAAR 116
G+ YLH K I H D+K N+++ D ++ K+ DF L+++ D
Sbjct: 119 SFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED---G 172
Query: 117 LHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
+ + GT + APE L ++D++S GV+ LL+G P
Sbjct: 173 VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 70/161 (43%), Gaps = 14/161 (8%)
Query: 2 VSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVK 61
+ + H + V+L+G + ++ E + G L L RK L +
Sbjct: 65 MRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQVRKYS--------LDLASLIL 115
Query: 62 IAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTR 121
A + L YL K +HRDI + NVL+ +D K+ DF LS D + +++
Sbjct: 116 YAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED-STYYKASK 171
Query: 122 VLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
+ APE + + SDV+ FGV + E+L G KP
Sbjct: 172 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 212
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 71/162 (43%), Gaps = 17/162 (10%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVL--AYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQ 58
++ LKH N V+ +D T+ L E+ G L ++ KG + L +
Sbjct: 58 LLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVI-----TKGTKERQYLDEEF 112
Query: 59 RVKIAVGAAKGLEYLHEKAD--PHIIHRDIKSSNVLIFDDDVAKIADFDLS---NQAPDM 113
+++ L+ H ++D ++HRD+K +NV + K+ DF L+ N
Sbjct: 113 VLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSF 172
Query: 114 AARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLEL 155
A +GT Y +PE N KSD++S G +L EL
Sbjct: 173 AKTF-----VGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 70/161 (43%), Gaps = 14/161 (8%)
Query: 2 VSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVK 61
+ + H + V+L+G + ++ E + G L L RK L +
Sbjct: 67 MRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQVRKYS--------LDLASLIL 117
Query: 62 IAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTR 121
A + L YL K +HRDI + NVL+ +D K+ DF LS D + +++
Sbjct: 118 YAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED-STYYKASK 173
Query: 122 VLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
+ APE + + SDV+ FGV + E+L G KP
Sbjct: 174 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 214
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 70/159 (44%), Gaps = 14/159 (8%)
Query: 5 LKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAV 64
L + + V G+ D + E SL ++ RK V +P +Q ++
Sbjct: 99 LDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAV--TEPEARYFMRQTIQ--- 153
Query: 65 GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLG 124
G++YLH +IHRD+K N+ + DD KI DF L+ + R + G
Sbjct: 154 ----GVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER--KKXLCG 204
Query: 125 TFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVD 163
T Y APE + + D++S G +L LL G+ P +
Sbjct: 205 TPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 71/159 (44%), Gaps = 14/159 (8%)
Query: 5 LKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAV 64
L + + V G+ D + E SL ++ RK V +P +Q ++
Sbjct: 99 LDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAV--TEPEARYFMRQTIQ--- 153
Query: 65 GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLG 124
G++YLH +IHRD+K N+ + DD KI DF L+ + R + + G
Sbjct: 154 ----GVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT--LCG 204
Query: 125 TFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVD 163
T Y APE + + D++S G +L LL G+ P +
Sbjct: 205 TPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 70/161 (43%), Gaps = 14/161 (8%)
Query: 2 VSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVK 61
+ + H + V+L+G + ++ E + G L L RK L +
Sbjct: 65 MRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQVRKYS--------LDLASLIL 115
Query: 62 IAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTR 121
A + L YL K +HRDI + NVL+ +D K+ DF LS D + +++
Sbjct: 116 YAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED-STYYKASK 171
Query: 122 VLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
+ APE + + SDV+ FGV + E+L G KP
Sbjct: 172 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 212
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 70/161 (43%), Gaps = 14/161 (8%)
Query: 2 VSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVK 61
+ + H + V+L+G + ++ E + G L L RK L +
Sbjct: 68 MRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQVRKYS--------LDLASLIL 118
Query: 62 IAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTR 121
A + L YL K +HRDI + NVL+ +D K+ DF LS D + +++
Sbjct: 119 YAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED-STYYKASK 174
Query: 122 VLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
+ APE + + SDV+ FGV + E+L G KP
Sbjct: 175 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 215
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 74/165 (44%), Gaps = 19/165 (11%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ ++ H N + L + T VL E S G L D L ++ LS ++
Sbjct: 68 ILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKES---------LSEEEAT 118
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDV----AKIADFDLSNQAPDMAAR 116
G+ YLH K I H D+K N+++ D ++ K+ DF L+++ D
Sbjct: 119 SFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG--- 172
Query: 117 LHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
+ + GT + APE L ++D++S GV+ LL+G P
Sbjct: 173 VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 69/163 (42%), Gaps = 20/163 (12%)
Query: 5 LKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAV 64
+H N V+L+ C TSR E + + P P L + +
Sbjct: 71 FEHPNVVRLMDVC--ATSRT-DREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMR 127
Query: 65 GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHS----- 119
+GL++LH I+HRD+K N+L+ K+ADF L AR++S
Sbjct: 128 QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGL--------ARIYSYQMAL 176
Query: 120 TRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPV 162
T V+ T Y APE + D++S G + E+ RKP+
Sbjct: 177 TPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 218
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 70/159 (44%), Gaps = 14/159 (8%)
Query: 5 LKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAV 64
L + + V G+ D + E SL ++ RK V +P +Q ++
Sbjct: 99 LDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAV--TEPEARYFMRQTIQ--- 153
Query: 65 GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLG 124
G++YLH +IHRD+K N+ + DD KI DF L+ + R + G
Sbjct: 154 ----GVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER--KKDLCG 204
Query: 125 TFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVD 163
T Y APE + + D++S G +L LL G+ P +
Sbjct: 205 TPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 71/162 (43%), Gaps = 17/162 (10%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVL--AYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQ 58
++ LKH N V+ +D T+ L E+ G L ++ KG + L +
Sbjct: 58 LLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVI-----TKGTKERQYLDEEF 112
Query: 59 RVKIAVGAAKGLEYLHEKAD--PHIIHRDIKSSNVLIFDDDVAKIADFDLS---NQAPDM 113
+++ L+ H ++D ++HRD+K +NV + K+ DF L+ N
Sbjct: 113 VLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSF 172
Query: 114 AARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLEL 155
A +GT Y +PE N KSD++S G +L EL
Sbjct: 173 AKAF-----VGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 70/161 (43%), Gaps = 19/161 (11%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +L+HEN V LL C L +EF + L D+ G L +Q
Sbjct: 77 LLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNG---------LDYQVVQ 127
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQ--APDMAARLH 118
K G+ + H +IIHRDIK N+L+ V K+ DF + AP ++
Sbjct: 128 KYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAP---GEVY 181
Query: 119 STRVLGTFGYHAPEYAMTGQLNAKS-DVYSFGVVLLELLTG 158
V T Y APE + K+ DV++ G ++ E+ G
Sbjct: 182 DDEV-ATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMG 221
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 70/159 (44%), Gaps = 14/159 (8%)
Query: 5 LKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAV 64
L + + V G+ D + E SL ++ RK V +P +Q ++
Sbjct: 83 LDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAV--TEPEARYFMRQTIQ--- 137
Query: 65 GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLG 124
G++YLH +IHRD+K N+ + DD KI DF L+ + R + G
Sbjct: 138 ----GVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER--KKDLCG 188
Query: 125 TFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVD 163
T Y APE + + D++S G +L LL G+ P +
Sbjct: 189 TPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFE 227
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 70/159 (44%), Gaps = 14/159 (8%)
Query: 5 LKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAV 64
L H++ V G+ D + E SL ++ RK + +P +Q V
Sbjct: 74 LAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKAL--TEPEARYYLRQIVL--- 128
Query: 65 GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLG 124
G +YLH +IHRD+K N+ + +D KI DF L+ + R + + G
Sbjct: 129 ----GCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCG 179
Query: 125 TFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVD 163
T Y APE + + DV+S G ++ LL G+ P +
Sbjct: 180 TPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 218
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 70/159 (44%), Gaps = 14/159 (8%)
Query: 5 LKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAV 64
L H++ V G+ D + E SL ++ RK + +P +Q V
Sbjct: 78 LAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKAL--TEPEARYYLRQIVL--- 132
Query: 65 GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLG 124
G +YLH +IHRD+K N+ + +D KI DF L+ + R + + G
Sbjct: 133 ----GCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCG 183
Query: 125 TFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVD 163
T Y APE + + DV+S G ++ LL G+ P +
Sbjct: 184 TPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 222
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 69/159 (43%), Gaps = 14/159 (8%)
Query: 5 LKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAV 64
L H++ V G+ D + E SL ++ RK + +P +Q V
Sbjct: 74 LAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKAL--TEPEARYYLRQIVL--- 128
Query: 65 GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLG 124
G +YLH +IHRD+K N+ + +D KI DF L+ + R + G
Sbjct: 129 ----GCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER--KKTLCG 179
Query: 125 TFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVD 163
T Y APE + + DV+S G ++ LL G+ P +
Sbjct: 180 TPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 218
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 70/161 (43%), Gaps = 14/161 (8%)
Query: 2 VSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVK 61
+ + H + V+L+G + ++ E + G L L RK L +
Sbjct: 445 MRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQVRKFS--------LDLASLIL 495
Query: 62 IAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTR 121
A + L YL K +HRDI + NVL+ +D K+ DF LS D + +++
Sbjct: 496 YAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED-STYYKASK 551
Query: 122 VLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
+ APE + + SDV+ FGV + E+L G KP
Sbjct: 552 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 592
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 87/173 (50%), Gaps = 37/173 (21%)
Query: 5 LKHENFVQLLGYCV-DGTSR------VLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQ 57
L+H+N +LG+ D TSR L + +GSL+D L R+ ++ P L+
Sbjct: 59 LRHDN---ILGFIASDMTSRNSSTQLWLITHYHEHGSLYDFLQ-RQTLE-----PHLA-- 107
Query: 58 QRVKIAVGAAKGLEYLH-----EKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS---NQ 109
+++AV AA GL +LH + P I HRD KS NVL+ + IAD L+ +Q
Sbjct: 108 --LRLAVSAACGLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQ 165
Query: 110 APDMAARLHSTRVLGTFGYHAPEYAMTGQLNAK-------SDVYSFGVVLLEL 155
D ++ RV GT Y APE + Q+ +D+++FG+VL E+
Sbjct: 166 GSDYLDIGNNPRV-GTKRYMAPE-VLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 69/159 (43%), Gaps = 14/159 (8%)
Query: 5 LKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAV 64
L H++ V G+ D + E SL ++ RK + +P +Q V
Sbjct: 96 LAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKAL--TEPEARYYLRQIVL--- 150
Query: 65 GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLG 124
G +YLH +IHRD+K N+ + +D KI DF L+ + R + G
Sbjct: 151 ----GCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER--KKVLCG 201
Query: 125 TFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVD 163
T Y APE + + DV+S G ++ LL G+ P +
Sbjct: 202 TPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 240
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 69/159 (43%), Gaps = 14/159 (8%)
Query: 5 LKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAV 64
L H++ V G+ D + E SL ++ RK + +P +Q V
Sbjct: 98 LAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKAL--TEPEARYYLRQIVL--- 152
Query: 65 GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLG 124
G +YLH +IHRD+K N+ + +D KI DF L+ + R + G
Sbjct: 153 ----GCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER--KKVLCG 203
Query: 125 TFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVD 163
T Y APE + + DV+S G ++ LL G+ P +
Sbjct: 204 TPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 242
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 74/165 (44%), Gaps = 19/165 (11%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ ++H N + L + T VL E S G L D L ++ L+ +
Sbjct: 68 ILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES---------LTEDEAT 118
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDV----AKIADFDLSNQAPDMAAR 116
+ G+ YLH K I H D+K N+++ D +V K+ DF ++++ + A
Sbjct: 119 QFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHK---IEAG 172
Query: 117 LHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
+ GT + APE L ++D++S GV+ LL+G P
Sbjct: 173 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 69/161 (42%), Gaps = 14/161 (8%)
Query: 2 VSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVK 61
+ + H + V+L+G + ++ E + G L L RK L +
Sbjct: 65 MRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQVRKFS--------LDLASLIL 115
Query: 62 IAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTR 121
A + L YL K +HRDI + NVL+ D K+ DF LS D + +++
Sbjct: 116 YAYQLSTALAYLESK---RFVHRDIAARNVLVSATDCVKLGDFGLSRYMED-STYYKASK 171
Query: 122 VLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
+ APE + + SDV+ FGV + E+L G KP
Sbjct: 172 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 212
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 89/204 (43%), Gaps = 26/204 (12%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +L H N ++L + D + L E G L D + R+ ++
Sbjct: 74 VLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMK----- 128
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFD---DDVAKIADFDLSNQAPDMAARL 117
G YLH+ +I+HRD+K N+L+ D + KI DF LS ++ ++
Sbjct: 129 ----QVLSGTTYLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHF-EVGGKM 180
Query: 118 HSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPV-----DHTLPRGQQS 172
LGT Y APE + + + K DV+S GV+L LL G P L R ++
Sbjct: 181 KER--LGTAYYIAPE-VLRKKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKG 237
Query: 173 LVTWATPKLSE--DKVRQCVDARL 194
++ P ++ D+ +Q V L
Sbjct: 238 KFSFDPPDWTQVSDEAKQLVKLML 261
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 72/165 (43%), Gaps = 21/165 (12%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ L H N ++L D L EF G L + + R ++
Sbjct: 99 LLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMK----- 153
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDV---AKIADFDLSNQ-APDMAAR 116
G+ YLH+ +I+HRDIK N+L+ + + KI DF LS+ + D R
Sbjct: 154 ----QILSGICYLHK---HNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLR 206
Query: 117 LHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
LGT Y APE + + N K DV+S GV++ LL G P
Sbjct: 207 DR----LGTAYYIAPE-VLKKKYNEKCDVWSCGVIMYILLCGYPP 246
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 69/159 (43%), Gaps = 14/159 (8%)
Query: 5 LKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAV 64
L H++ V G+ D + E SL ++ RK + +P +Q V
Sbjct: 72 LAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKAL--TEPEARYYLRQIVL--- 126
Query: 65 GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLG 124
G +YLH +IHRD+K N+ + +D KI DF L+ + R + G
Sbjct: 127 ----GCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER--KKVLCG 177
Query: 125 TFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVD 163
T Y APE + + DV+S G ++ LL G+ P +
Sbjct: 178 TPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 216
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 127
+GL+Y+H AD IIHRD+K SN+ + +D KI F L+ D T + T
Sbjct: 136 RGLKYIH-SAD--IIHRDLKPSNLAVNEDCELKILGFGLARHTDD-----EMTGYVATRW 187
Query: 128 YHAPEYAMTG-QLNAKSDVYSFGVVLLELLTGR 159
Y APE + N D++S G ++ ELLTGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 76/179 (42%), Gaps = 22/179 (12%)
Query: 5 LKHENFVQLLGYCVDGT----SRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
H N ++L+ YC+ L F G+L + + K G L+ Q +
Sbjct: 83 FNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLK-----DKGNFLTEDQIL 137
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+ +G +GLE +H K HRD+K +N+L+ D+ + D NQA
Sbjct: 138 WLLLGICRGLEAIHAKG---YAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQA 194
Query: 121 RVL-------GTFGYHAPE-YAMTGQ--LNAKSDVYSFGVVLLELLTGRKPVDHTLPRG 169
L T Y APE +++ ++ ++DV+S G VL ++ G P D +G
Sbjct: 195 LTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKG 253
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 74/165 (44%), Gaps = 19/165 (11%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ ++H N + L + T VL E S G L D L ++ L+ +
Sbjct: 61 ILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES---------LTEDEAT 111
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDV----AKIADFDLSNQAPDMAAR 116
+ G+ YLH K I H D+K N+++ D +V K+ DF ++++ + A
Sbjct: 112 QFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHK---IEAG 165
Query: 117 LHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
+ GT + APE L ++D++S GV+ LL+G P
Sbjct: 166 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 210
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 73/161 (45%), Gaps = 19/161 (11%)
Query: 5 LKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAV 64
L+H + ++L ++ E+A N I+ K +S Q+ +
Sbjct: 61 LRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDK----------MSEQEARRFFQ 110
Query: 65 GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLG 124
+EY H I+HRD+K N+L+ + KIADF LSN D S G
Sbjct: 111 QIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---G 164
Query: 125 TFGYHAPEYAMTGQLNA--KSDVYSFGVVLLELLTGRKPVD 163
+ Y APE ++G+L A + DV+S GV+L +L R P D
Sbjct: 165 SPNYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 204
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 74/165 (44%), Gaps = 19/165 (11%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ ++H N + L + T VL E S G L D L ++ L+ +
Sbjct: 82 ILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES---------LTEDEAT 132
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDV----AKIADFDLSNQAPDMAAR 116
+ G+ YLH K I H D+K N+++ D +V K+ DF ++++ + A
Sbjct: 133 QFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHK---IEAG 186
Query: 117 LHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
+ GT + APE L ++D++S GV+ LL+G P
Sbjct: 187 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 231
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 72/166 (43%), Gaps = 19/166 (11%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +L H N ++L + D L E + G L D + RK ++
Sbjct: 85 LLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIR----- 139
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLI---FDDDVAKIADFDLSNQAPDMAARL 117
G+ Y+H+ I+HRD+K N+L+ D +I DF LS A
Sbjct: 140 ----QVLSGITYMHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLSTH---FEASK 189
Query: 118 HSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVD 163
+GT Y APE + G + K DV+S GV+L LL+G P +
Sbjct: 190 KMKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSGCPPFN 234
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 73/161 (45%), Gaps = 19/161 (11%)
Query: 5 LKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAV 64
L+H + ++L ++ E+A N I+ K +S Q+ +
Sbjct: 65 LRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDK----------MSEQEARRFFQ 114
Query: 65 GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLG 124
+EY H I+HRD+K N+L+ + KIADF LSN D S G
Sbjct: 115 QIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---G 168
Query: 125 TFGYHAPEYAMTGQLNA--KSDVYSFGVVLLELLTGRKPVD 163
+ Y APE ++G+L A + DV+S GV+L +L R P D
Sbjct: 169 SPNYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 208
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQA-PDMAARLHSTRVLGTF 126
+GL+Y+H +++HRD+K SN+L+ KI DF L+ A PD T + T
Sbjct: 137 RGLKYIHSA---NVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 127 GYHAPEYAMTGQLNAKS-DVYSFGVVLLELLTGR 159
Y APE + + KS D++S G +L E+L+ R
Sbjct: 194 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 73/165 (44%), Gaps = 23/165 (13%)
Query: 7 HENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGA 66
H N +QL T L ++ G L D L + LS ++ KI
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK---------VTLSEKETRKIMRAL 133
Query: 67 AKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTF 126
+ + LH+ +I+HRD+K N+L+ DD K+ DF S Q D +L S V GT
Sbjct: 134 LEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFSCQL-DPGEKLRS--VCGTP 187
Query: 127 GYHAPEYAMTGQLN-------AKSDVYSFGVVLLELLTGRKPVDH 164
Y APE + +N + D++S GV++ LL G P H
Sbjct: 188 SYLAPE-IIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWH 231
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 76/166 (45%), Gaps = 18/166 (10%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
+++ H N V+LL + + EF + G++ ++ ++ +P L+ Q
Sbjct: 87 ILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVM-----LELERP---LTESQIQ 138
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+ L YLH D IIHRD+K+ N+L D K+ADF +S + R S
Sbjct: 139 VVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDS- 194
Query: 121 RVLGTFGYHAPEYAMTGQ-----LNAKSDVYSFGVVLLELLTGRKP 161
+GT + APE M + K+DV+S G+ L+E+ P
Sbjct: 195 -FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 71/164 (43%), Gaps = 27/164 (16%)
Query: 5 LKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAV 64
L H N ++L + D + L E G L D + R ++
Sbjct: 93 LDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIK--------- 143
Query: 65 GAAKGLEYLHEKADPHIIHRDIKSSNVLIFD---DDVAKIADFDLS----NQAPDMAARL 117
G+ YLH+ +I+HRD+K N+L+ D + KI DF LS NQ M RL
Sbjct: 144 QVLSGVTYLHK---HNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKK-MKERL 199
Query: 118 HSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
GT Y APE + + + K DV+S GV+L LL G P
Sbjct: 200 ------GTAYYIAPE-VLRKKYDEKCDVWSIGVILFILLAGYPP 236
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 73/161 (45%), Gaps = 19/161 (11%)
Query: 5 LKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAV 64
L+H + ++L ++ E+A N I+ K +S Q+ +
Sbjct: 70 LRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDK----------MSEQEARRFFQ 119
Query: 65 GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLG 124
+EY H I+HRD+K N+L+ + KIADF LSN D S G
Sbjct: 120 QIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---G 173
Query: 125 TFGYHAPEYAMTGQLNA--KSDVYSFGVVLLELLTGRKPVD 163
+ Y APE ++G+L A + DV+S GV+L +L R P D
Sbjct: 174 SPNYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 213
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 71/161 (44%), Gaps = 14/161 (8%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +KH V L+ G L E+ S G L L R+G+ + +
Sbjct: 74 ILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLE-REGI--FMEDTACFYLAEI 130
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+A+G +LH+K II+RD+K N+++ K+ DF L ++ H+
Sbjct: 131 SMALG------HLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHT- 180
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
GT Y APE M N D +S G ++ ++LTG P
Sbjct: 181 -FCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 79/192 (41%), Gaps = 31/192 (16%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
M+ +LKH N V LL L +E+ + LH++ ++GV + +WQ
Sbjct: 55 MLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSI-TWQ--- 110
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+ + + H+ + IHRD+K N+LI V K+ DF + + +
Sbjct: 111 -----TLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSD--YYD 160
Query: 121 RVLGTFGYHAPEYAM-TGQLNAKSDVYSFGVVLLELLTG----------------RKPVD 163
+ T Y +PE + Q DV++ G V ELL+G RK +
Sbjct: 161 DEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLG 220
Query: 164 HTLPRGQQSLVT 175
+PR QQ T
Sbjct: 221 DLIPRHQQVFST 232
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 73/161 (45%), Gaps = 19/161 (11%)
Query: 5 LKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAV 64
L+H + ++L ++ E+A N I+ K +S Q+ +
Sbjct: 71 LRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDK----------MSEQEARRFFQ 120
Query: 65 GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLG 124
+EY H I+HRD+K N+L+ + KIADF LSN D S G
Sbjct: 121 QIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---G 174
Query: 125 TFGYHAPEYAMTGQLNA--KSDVYSFGVVLLELLTGRKPVD 163
+ Y APE ++G+L A + DV+S GV+L +L R P D
Sbjct: 175 SPNYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 214
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 76/166 (45%), Gaps = 18/166 (10%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
+++ H N V+LL + + EF + G++ ++ ++ +P L+ Q
Sbjct: 87 ILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVM-----LELERP---LTESQIQ 138
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+ L YLH D IIHRD+K+ N+L D K+ADF +S + R S
Sbjct: 139 VVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDS- 194
Query: 121 RVLGTFGYHAPEYAMTGQ-----LNAKSDVYSFGVVLLELLTGRKP 161
+GT + APE M + K+DV+S G+ L+E+ P
Sbjct: 195 -FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 69/163 (42%), Gaps = 20/163 (12%)
Query: 5 LKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAV 64
+H N V+L+ C TSR E + + P P L + +
Sbjct: 63 FEHPNVVRLMDVC--ATSRT-DREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMR 119
Query: 65 GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTR--- 121
+GL++LH I+HRD+K N+L+ K+ADF L AR++S +
Sbjct: 120 QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGL--------ARIYSYQMAL 168
Query: 122 --VLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPV 162
V+ T Y APE + D++S G + E+ RKP+
Sbjct: 169 APVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 210
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 69/163 (42%), Gaps = 20/163 (12%)
Query: 5 LKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAV 64
+H N V+L+ C TSR E + + P P L + +
Sbjct: 63 FEHPNVVRLMDVC--ATSRT-DREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMR 119
Query: 65 GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTR--- 121
+GL++LH I+HRD+K N+L+ K+ADF L AR++S +
Sbjct: 120 QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGL--------ARIYSYQMAL 168
Query: 122 --VLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPV 162
V+ T Y APE + D++S G + E+ RKP+
Sbjct: 169 DPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 210
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 69/163 (42%), Gaps = 20/163 (12%)
Query: 5 LKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAV 64
+H N V+L+ C TSR E + + P P L + +
Sbjct: 63 FEHPNVVRLMDVC--ATSRT-DREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMR 119
Query: 65 GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTR--- 121
+GL++LH I+HRD+K N+L+ K+ADF L AR++S +
Sbjct: 120 QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGL--------ARIYSYQMAL 168
Query: 122 --VLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPV 162
V+ T Y APE + D++S G + E+ RKP+
Sbjct: 169 FPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 210
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 127
+GL+Y+H AD IIHRD+K SN+ + +D KI D L+ D T + T
Sbjct: 136 RGLKYIH-SAD--IIHRDLKPSNLAVNEDCELKILDAGLARHTDD-----EMTGYVATRW 187
Query: 128 YHAPEYAMTG-QLNAKSDVYSFGVVLLELLTGR 159
Y APE + N D++S G ++ ELLTGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 127
+GL+Y+H AD IIHRD+K SN+ + +D KI D L+ D T + T
Sbjct: 136 RGLKYIH-SAD--IIHRDLKPSNLAVNEDCELKILDRGLARHTDD-----EMTGYVATRW 187
Query: 128 YHAPEYAMTG-QLNAKSDVYSFGVVLLELLTGR 159
Y APE + N D++S G ++ ELLTGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQA-PDMAARLHSTRVLGTF 126
+GL+Y+H +++HRD+K SN+L+ KI DF L+ A PD T + T
Sbjct: 155 RGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 211
Query: 127 GYHAPEYAMTGQLNAKS-DVYSFGVVLLELLTGR 159
Y APE + + KS D++S G +L E+L+ R
Sbjct: 212 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 56/107 (52%), Gaps = 9/107 (8%)
Query: 54 LSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSN---QA 110
L+ + + + AKG+E+L A IHRD+ + N+L+ + +V KI DF L+ +
Sbjct: 188 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 244
Query: 111 PDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT 157
PD R R+ + APE +SDV+SFGV+L E+ +
Sbjct: 245 PDY-VRKGDARL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQA-PDMAARLHSTRVLGTF 126
+GL+Y+H +++HRD+K SN+L+ KI DF L+ A PD T + T
Sbjct: 139 RGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 127 GYHAPEYAMTGQLNAKS-DVYSFGVVLLELLTGR 159
Y APE + + KS D++S G +L E+L+ R
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQA-PDMAARLHSTRVLGTF 126
+GL+Y+H +++HRD+K SN+L+ KI DF L+ A PD T + T
Sbjct: 135 RGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 127 GYHAPEYAMTGQLNAKS-DVYSFGVVLLELLTGR 159
Y APE + + KS D++S G +L E+L+ R
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 56/107 (52%), Gaps = 9/107 (8%)
Query: 54 LSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSN---QA 110
L+ + + + AKG+E+L A IHRD+ + N+L+ + +V KI DF L+ +
Sbjct: 197 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 253
Query: 111 PDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT 157
PD R R+ + APE +SDV+SFGV+L E+ +
Sbjct: 254 PDY-VRKGDARL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 56/107 (52%), Gaps = 9/107 (8%)
Query: 54 LSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSN---QA 110
L+ + + + AKG+E+L A IHRD+ + N+L+ + +V KI DF L+ +
Sbjct: 195 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 251
Query: 111 PDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT 157
PD R R+ + APE +SDV+SFGV+L E+ +
Sbjct: 252 PDY-VRKGDARL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 56/107 (52%), Gaps = 9/107 (8%)
Query: 54 LSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSN---QA 110
L+ + + + AKG+E+L A IHRD+ + N+L+ + +V KI DF L+ +
Sbjct: 190 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 246
Query: 111 PDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT 157
PD R R+ + APE +SDV+SFGV+L E+ +
Sbjct: 247 PDY-VRKGDARL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQA-PDMAARLHSTRVLGTF 126
+GL+Y+H +++HRD+K SN+L+ KI DF L+ A PD T + T
Sbjct: 139 RGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 127 GYHAPEYAMTGQLNAKS-DVYSFGVVLLELLTGR 159
Y APE + + KS D++S G +L E+L+ R
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQA-PDMAARLHSTRVLGTF 126
+GL+Y+H +++HRD+K SN+L+ KI DF L+ A PD T + T
Sbjct: 135 RGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 127 GYHAPEYAMTGQLNAKS-DVYSFGVVLLELLTGR 159
Y APE + + KS D++S G +L E+L+ R
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 60/117 (51%), Gaps = 7/117 (5%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQA-PDMAARLHSTRVLGTF 126
+GL+Y+H +++HRD+K SN+L+ KI DF L+ A PD T + T
Sbjct: 133 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 189
Query: 127 GYHAPEYAMTGQLNAKS-DVYSFGVVLLELLTGRK--PVDHTLPRGQQSLVTWATPK 180
Y APE + + KS D++S G +L E+L+ R P H L + L +P+
Sbjct: 190 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPE 246
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 73/166 (43%), Gaps = 19/166 (11%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +L H N ++L + D L E + G L D + RK S
Sbjct: 102 LLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR---------FSEVDAA 152
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLI---FDDDVAKIADFDLSNQAPDMAARL 117
+I G+ Y+H+ I+HRD+K N+L+ D +I DF LS A
Sbjct: 153 RIIRQVLSGITYMHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLSTH---FEASK 206
Query: 118 HSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVD 163
+GT Y APE + G + K DV+S GV+L LL+G P +
Sbjct: 207 KMKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSGCPPFN 251
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 66/160 (41%), Gaps = 18/160 (11%)
Query: 6 KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVG 65
+H N + L DG + E G L D + +K + VL
Sbjct: 74 QHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVL---------FT 124
Query: 66 AAKGLEYLHEKADPHIIHRDIKSSNVLIFDD----DVAKIADFDLSNQAPDMAARLHSTR 121
K +EYLH + ++HRD+K SN+L D+ + +I DF + Q L +
Sbjct: 125 ITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPC 181
Query: 122 VLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
F APE +A D++S GV+L +LTG P
Sbjct: 182 YTANFV--APEVLERQGYDAACDIWSLGVLLYTMLTGYTP 219
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 73/166 (43%), Gaps = 19/166 (11%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +L H N ++L + D L E + G L D + RK S
Sbjct: 79 LLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR---------FSEVDAA 129
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLI---FDDDVAKIADFDLSNQAPDMAARL 117
+I G+ Y+H+ I+HRD+K N+L+ D +I DF LS A
Sbjct: 130 RIIRQVLSGITYMHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLSTH---FEASK 183
Query: 118 HSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVD 163
+GT Y APE + G + K DV+S GV+L LL+G P +
Sbjct: 184 KMKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSGCPPFN 228
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 73/166 (43%), Gaps = 19/166 (11%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +L H N ++L + D L E + G L D + RK S
Sbjct: 103 LLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR---------FSEVDAA 153
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLI---FDDDVAKIADFDLSNQAPDMAARL 117
+I G+ Y+H+ I+HRD+K N+L+ D +I DF LS A
Sbjct: 154 RIIRQVLSGITYMHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLSTH---FEASK 207
Query: 118 HSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVD 163
+GT Y APE + G + K DV+S GV+L LL+G P +
Sbjct: 208 KMKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSGCPPFN 252
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 72/167 (43%), Gaps = 28/167 (16%)
Query: 5 LKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAV 64
L+ NFV+ + ++ + E+ N +L+D++H + W+ +I
Sbjct: 72 LERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDE----YWRLFRQIL- 126
Query: 65 GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDL--------------SNQA 110
+ L Y+H + IIHRD+K N+ I + KI DF L S
Sbjct: 127 ---EALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 111 PDMAARLHSTRVLGTFGYHAPEYA-MTGQLNAKSDVYSFGVVLLELL 156
P + L T +GT Y A E TG N K D+YS G++ E++
Sbjct: 181 PGSSDNL--TSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 127
+GL+Y+H AD IIHRD+K SN+ + +D KI D L+ D T + T
Sbjct: 136 RGLKYIH-SAD--IIHRDLKPSNLAVNEDCELKILDGGLARHTDD-----EMTGYVATRW 187
Query: 128 YHAPEYAMTG-QLNAKSDVYSFGVVLLELLTGR 159
Y APE + N D++S G ++ ELLTGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQA-PDMAARLHSTRVLGTF 126
+GL+Y+H +++HRD+K SN+L+ KI DF L+ A PD T + T
Sbjct: 139 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 127 GYHAPEYAMTGQLNAKS-DVYSFGVVLLELLTGR 159
Y APE + + KS D++S G +L E+L+ R
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQA-PDMAARLHSTRVLGTF 126
+GL+Y+H +++HRD+K SN+L+ KI DF L+ A PD T + T
Sbjct: 155 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 211
Query: 127 GYHAPEYAMTGQLNAKS-DVYSFGVVLLELLTGR 159
Y APE + + KS D++S G +L E+L+ R
Sbjct: 212 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 70/161 (43%), Gaps = 14/161 (8%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +KH V L+ G L E+ S G L L R+G+ + +
Sbjct: 74 ILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLE-REGI--FMEDTACFYLAEI 130
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+A+G +LH+K II+RD+K N+++ K+ DF L ++ H
Sbjct: 131 SMALG------HLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHX- 180
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
GT Y APE M N D +S G ++ ++LTG P
Sbjct: 181 -FCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 69/161 (42%), Gaps = 14/161 (8%)
Query: 2 VSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVK 61
+ + H + V+L+G + ++ E + G L L RK L +
Sbjct: 445 MRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQVRKFS--------LDLASLIL 495
Query: 62 IAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTR 121
A + L YL K +HRDI + NVL+ D K+ DF LS D + +++
Sbjct: 496 YAYQLSTALAYLESK---RFVHRDIAARNVLVSATDCVKLGDFGLSRYMED-STYYKASK 551
Query: 122 VLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
+ APE + + SDV+ FGV + E+L G KP
Sbjct: 552 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 592
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQA-PDMAARLHSTRVLGTF 126
+GL+Y+H +++HRD+K SN+L+ KI DF L+ A PD T + T
Sbjct: 140 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 196
Query: 127 GYHAPEYAMTGQLNAKS-DVYSFGVVLLELLTGR 159
Y APE + + KS D++S G +L E+L+ R
Sbjct: 197 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQA-PDMAARLHSTRVLGTF 126
+GL+Y+H +++HRD+K SN+L+ KI DF L+ A PD T + T
Sbjct: 141 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 197
Query: 127 GYHAPEYAMTGQLNAKS-DVYSFGVVLLELLTGR 159
Y APE + + KS D++S G +L E+L+ R
Sbjct: 198 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQA-PDMAARLHSTRVLGTF 126
+GL+Y+H +++HRD+K SN+L+ KI DF L+ A PD T + T
Sbjct: 132 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 188
Query: 127 GYHAPEYAMTGQLNAKS-DVYSFGVVLLELLTGR 159
Y APE + + KS D++S G +L E+L+ R
Sbjct: 189 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQA-PDMAARLHSTRVLGTF 126
+GL+Y+H +++HRD+K SN+L+ KI DF L+ A PD T + T
Sbjct: 139 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 127 GYHAPEYAMTGQLNAKS-DVYSFGVVLLELLTGR 159
Y APE + + KS D++S G +L E+L+ R
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQA-PDMAARLHSTRVLGTF 126
+GL+Y+H +++HRD+K SN+L+ KI DF L+ A PD T + T
Sbjct: 133 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 189
Query: 127 GYHAPEYAMTGQLNAKS-DVYSFGVVLLELLTGR 159
Y APE + + KS D++S G +L E+L+ R
Sbjct: 190 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQA-PDMAARLHSTRVLGTF 126
+GL+Y+H +++HRD+K SN+L+ KI DF L+ A PD T + T
Sbjct: 139 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 127 GYHAPEYAMTGQLNAKS-DVYSFGVVLLELLTGR 159
Y APE + + KS D++S G +L E+L+ R
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 72/165 (43%), Gaps = 23/165 (13%)
Query: 7 HENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGA 66
H N +QL T L ++ G L D L + LS ++ KI
Sbjct: 70 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK---------VTLSEKETRKIMRAL 120
Query: 67 AKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTF 126
+ + LH+ +I+HRD+K N+L+ DD K+ DF S Q D +L V GT
Sbjct: 121 LEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFSCQL-DPGEKLRE--VCGTP 174
Query: 127 GYHAPEYAMTGQLN-------AKSDVYSFGVVLLELLTGRKPVDH 164
Y APE + +N + D++S GV++ LL G P H
Sbjct: 175 SYLAPE-IIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWH 218
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQA-PDMAARLHSTRVLGTF 126
+GL+Y+H +++HRD+K SN+LI KI DF L+ A P+ T + T
Sbjct: 155 RGLKYIHSA---NVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATR 211
Query: 127 GYHAPEYAMTGQLNAKS-DVYSFGVVLLELLTGR 159
Y APE + + KS D++S G +L E+L+ R
Sbjct: 212 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQA-PDMAARLHSTRVLGTF 126
+GL+Y+H +++HRD+K SN+L+ KI DF L+ A PD T + T
Sbjct: 137 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 127 GYHAPEYAMTGQLNAKS-DVYSFGVVLLELLTGR 159
Y APE + + KS D++S G +L E+L+ R
Sbjct: 194 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQA-PDMAARLHSTRVLGTF 126
+GL+Y+H +++HRD+K SN+L+ KI DF L+ A PD T + T
Sbjct: 137 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 127 GYHAPEYAMTGQLNAKS-DVYSFGVVLLELLTGR 159
Y APE + + KS D++S G +L E+L+ R
Sbjct: 194 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQA-PDMAARLHSTRVLGTF 126
+GL+Y+H +++HRD+K SN+L+ KI DF L+ A PD T + T
Sbjct: 135 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 127 GYHAPEYAMTGQLNAKS-DVYSFGVVLLELLTGR 159
Y APE + + KS D++S G +L E+L+ R
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 59/116 (50%), Gaps = 7/116 (6%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQA-PDMAARLHSTRVLGTF 126
+GL+Y+H +++HRD+K SN+L+ KI DF L+ A PD T + T
Sbjct: 143 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 199
Query: 127 GYHAPEYAMTGQLNAKS-DVYSFGVVLLELLTGRK--PVDHTLPRGQQSLVTWATP 179
Y APE + + KS D++S G +L E+L+ R P H L + L +P
Sbjct: 200 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 255
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 59/116 (50%), Gaps = 7/116 (6%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQA-PDMAARLHSTRVLGTF 126
+GL+Y+H +++HRD+K SN+L+ KI DF L+ A PD T + T
Sbjct: 135 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 127 GYHAPEYAMTGQLNAKS-DVYSFGVVLLELLTGRK--PVDHTLPRGQQSLVTWATP 179
Y APE + + KS D++S G +L E+L+ R P H L + L +P
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 247
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQA-PDMAARLHSTRVLGTF 126
+GL+Y+H +++HRD+K SN+L+ KI DF L+ A PD T + T
Sbjct: 135 RGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATR 191
Query: 127 GYHAPEYAMTGQLNAKS-DVYSFGVVLLELLTGR 159
Y APE + + KS D++S G +L E+L+ R
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 91/210 (43%), Gaps = 28/210 (13%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +L H N ++L + D + L E G L D + R+ ++
Sbjct: 57 VLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMK----- 111
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFD---DDVAKIADFDLSNQAPDMAARL 117
G YLH+ +I+HRD+K N+L+ D + KI DF LS ++ ++
Sbjct: 112 ----QVLSGTTYLHK---HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHF-EVGGKM 163
Query: 118 HSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPV-----DHTLPRGQQS 172
LGT Y APE + + + K DV+S GV+L LL G P L R ++
Sbjct: 164 KER--LGTAYYIAPE-VLRKKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKG 220
Query: 173 LVTWATPKLSE--DKVRQCVDARLGGDYPP 200
++ P ++ D+ +Q V L Y P
Sbjct: 221 KFSFDPPDWTQVSDEAKQLVKLMLT--YEP 248
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Query: 83 HRDIKSSNVLIFDDDVAKIADFDLSNQAPDMA-ARLHSTRVLGTFGYHAPEYAMTGQLNA 141
HRD+K N+L+ DD A + DF +++ D +L +T +GT Y APE
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNT--VGTLYYXAPERFSESHATY 214
Query: 142 KSDVYSFGVVLLELLTGRKP 161
++D+Y+ VL E LTG P
Sbjct: 215 RADIYALTCVLYECLTGSPP 234
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 71/164 (43%), Gaps = 19/164 (11%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ ++KHEN V L T L + S G L D + R GV + ++ Q+V
Sbjct: 59 VLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILER-GVYTEKDASLVI--QQV 115
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIF---DDDVAKIADFDLSNQAPDMAARL 117
AV +YLHE I+HRD+K N+L ++ I DF LS M
Sbjct: 116 LSAV------KYLHENG---IVHRDLKPENLLYLTPEENSKIMITDFGLSK----MEQNG 162
Query: 118 HSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
+ GT GY APE + D +S GV+ LL G P
Sbjct: 163 IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPP 206
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 74/165 (44%), Gaps = 19/165 (11%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ ++H N + L + T +L E + G L D L ++ L+ ++
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---------LTEEEAT 117
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDV----AKIADFDLSNQAPDMAAR 116
+ G+ YLH I H D+K N+++ D +V KI DF L+++ D
Sbjct: 118 EFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-DFGNE 173
Query: 117 LHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
+ + GT + APE L ++D++S GV+ LL+G P
Sbjct: 174 FKN--IFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 74/165 (44%), Gaps = 19/165 (11%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ ++H N + L + T +L E + G L D L ++ L+ ++
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---------LTEEEAT 117
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDV----AKIADFDLSNQAPDMAAR 116
+ G+ YLH I H D+K N+++ D +V KI DF L+++ D
Sbjct: 118 EFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-DFGNE 173
Query: 117 LHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
+ + GT + APE L ++D++S GV+ LL+G P
Sbjct: 174 FKN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 74/165 (44%), Gaps = 19/165 (11%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ ++H N + L + T +L E + G L D L ++ L+ ++
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---------LTEEEAT 117
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDV----AKIADFDLSNQAPDMAAR 116
+ G+ YLH I H D+K N+++ D +V KI DF L+++ D
Sbjct: 118 EFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-DFGNE 173
Query: 117 LHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
+ + GT + APE L ++D++S GV+ LL+G P
Sbjct: 174 FKN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 98/249 (39%), Gaps = 37/249 (14%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
M+S+L H++ V G CV G +L EF GSL L K + W ++
Sbjct: 65 MMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCIN------ILW--KL 116
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIAD---FDLSNQAPDMAARL 117
++A A + +L E +IH ++ + N+L+ ++ K + LS+ P ++ +
Sbjct: 117 EVAKQLAAAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSD--PGISITV 171
Query: 118 HSTRVLGTFGYHAPEYAMTG--QLNAKSDVYSFGVVLLELLT-GRKPVDHTLPRGQQSLV 174
+L P + LN +D +SFG L E+ + G KP+ +L
Sbjct: 172 LPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPL--------SALD 223
Query: 175 TWATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXXLCVQYEADFRPNMSIVVKALQPL 234
+ + ED+ P C+ YE D RP+ +++ L L
Sbjct: 224 SQRKLQFYEDR----------HQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSL 273
Query: 235 LNARPGPAG 243
P G
Sbjct: 274 FTPDLVPRG 282
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 74/165 (44%), Gaps = 19/165 (11%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ ++H N + L + T +L E + G L D L ++ L+ ++
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---------LTEEEAT 117
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDV----AKIADFDLSNQAPDMAAR 116
+ G+ YLH I H D+K N+++ D +V KI DF L+++ D
Sbjct: 118 EFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-DFGNE 173
Query: 117 LHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
+ + GT + APE L ++D++S GV+ LL+G P
Sbjct: 174 FKN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 69/164 (42%), Gaps = 21/164 (12%)
Query: 7 HENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGA 66
H N +QL T L ++ G L D L + LS ++ KI
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK---------VTLSEKETRKIMRAL 133
Query: 67 AKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTF 126
+ + LH+ +I+HRD+K N+L+ DD K+ DF S Q D +L V GT
Sbjct: 134 LEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFSCQL-DPGEKLRE--VCGTP 187
Query: 127 GYHAPEYAMTGQ------LNAKSDVYSFGVVLLELLTGRKPVDH 164
Y APE + D++S GV++ LL G P H
Sbjct: 188 SYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWH 231
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 74/165 (44%), Gaps = 19/165 (11%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ ++H N + L + T +L E + G L D L ++ L+ ++
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---------LTEEEAT 117
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDV----AKIADFDLSNQAPDMAAR 116
+ G+ YLH I H D+K N+++ D +V KI DF L+++ D
Sbjct: 118 EFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-DFGNE 173
Query: 117 LHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
+ + GT + APE L ++D++S GV+ LL+G P
Sbjct: 174 FKN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 75/166 (45%), Gaps = 18/166 (10%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
+++ H N V+LL + + EF + G++ ++ ++ +P L+ Q
Sbjct: 87 ILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVM-----LELERP---LTESQIQ 138
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+ L YLH D IIHRD+K+ N+L D K+ADF +S + R
Sbjct: 139 VVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQR--RD 193
Query: 121 RVLGTFGYHAPEYAMTGQ-----LNAKSDVYSFGVVLLELLTGRKP 161
+GT + APE M + K+DV+S G+ L+E+ P
Sbjct: 194 XFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 74/165 (44%), Gaps = 19/165 (11%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ ++H N + L + T +L E + G L D L ++ L+ ++
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---------LTEEEAT 117
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDV----AKIADFDLSNQAPDMAAR 116
+ G+ YLH I H D+K N+++ D +V KI DF L+++ D
Sbjct: 118 EFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-DFGNE 173
Query: 117 LHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
+ + GT + APE L ++D++S GV+ LL+G P
Sbjct: 174 FKN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 74/165 (44%), Gaps = 19/165 (11%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ ++H N + L + T +L E + G L D L ++ L+ ++
Sbjct: 66 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---------LTEEEAT 116
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDV----AKIADFDLSNQAPDMAAR 116
+ G+ YLH I H D+K N+++ D +V KI DF L+++ D
Sbjct: 117 EFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-DFGNE 172
Query: 117 LHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
+ + GT + APE L ++D++S GV+ LL+G P
Sbjct: 173 FKN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 215
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 74/165 (44%), Gaps = 19/165 (11%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ ++H N + L + T +L E + G L D L ++ L+ ++
Sbjct: 66 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---------LTEEEAT 116
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDV----AKIADFDLSNQAPDMAAR 116
+ G+ YLH I H D+K N+++ D +V KI DF L+++ D
Sbjct: 117 EFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-DFGNE 172
Query: 117 LHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
+ + GT + APE L ++D++S GV+ LL+G P
Sbjct: 173 FKN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 215
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 74/165 (44%), Gaps = 19/165 (11%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ ++H N + L + T +L E + G L D L ++ L+ ++
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---------LTEEEAT 117
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDV----AKIADFDLSNQAPDMAAR 116
+ G+ YLH I H D+K N+++ D +V KI DF L+++ D
Sbjct: 118 EFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-DFGNE 173
Query: 117 LHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
+ + GT + APE L ++D++S GV+ LL+G P
Sbjct: 174 FKN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 69/147 (46%), Gaps = 17/147 (11%)
Query: 24 VLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQR-----VKIAVGA-AKGLEYLHEKA 77
L Y F + LH IL + G + LS ++R V+I VG LE+LH+
Sbjct: 123 TLHYAFQTETKLHLIL---DYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLG 179
Query: 78 DPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQ-APDMAARLHSTRVLGTFGYHAPEYAMT 136
II+RDIK N+L+ + + DF LS + D R + GT Y AP+
Sbjct: 180 ---IIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYD--FCGTIEYMAPDIVRG 234
Query: 137 GQL--NAKSDVYSFGVVLLELLTGRKP 161
G + D +S GV++ ELLTG P
Sbjct: 235 GDSGHDKAVDWWSLGVLMYELLTGASP 261
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 74/165 (44%), Gaps = 19/165 (11%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ ++H N + L + T +L E + G L D L ++ L+ ++
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---------LTEEEAT 117
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDV----AKIADFDLSNQAPDMAAR 116
+ G+ YLH I H D+K N+++ D +V KI DF L+++ D
Sbjct: 118 EFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-DFGNE 173
Query: 117 LHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
+ + GT + APE L ++D++S GV+ LL+G P
Sbjct: 174 FKN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 78/179 (43%), Gaps = 30/179 (16%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFA-----SNGSLHDILHGRKGVKGAQPGPVLS 55
++ ++HEN + LL +S Y+F L I+ G S
Sbjct: 94 LLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIM-----------GMEFS 142
Query: 56 WQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAA 115
++ + KGL+Y+H ++HRD+K N+ + +D KI DF L+ A
Sbjct: 143 EEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHAD---- 195
Query: 116 RLHSTRVLGTFGYHAPEYAMTG-QLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSL 173
T + T Y APE ++ N D++S G ++ E+LTG+ TL +G+ L
Sbjct: 196 -AEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK-----TLFKGKDYL 248
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 6/96 (6%)
Query: 69 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 128
GLE LH + I++RD+K N+L+ D +I+D L+ P+ + RV GT GY
Sbjct: 298 GLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPE--GQTIKGRV-GTVGY 351
Query: 129 HAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDH 164
APE + D ++ G +L E++ G+ P
Sbjct: 352 MAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQ 387
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 79/173 (45%), Gaps = 37/173 (21%)
Query: 5 LKHENFVQLLGYCV-------DGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQ 57
L+HEN +LG+ T L ++ +GSL D L+ ++ +
Sbjct: 93 LRHEN---ILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY----------TVTVE 139
Query: 58 QRVKIAVGAAKGLEYLH-----EKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS---NQ 109
+K+A+ A GL +LH + P I HRD+KS N+L+ + IAD L+ +
Sbjct: 140 GMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDS 199
Query: 110 APDMAARLHSTRVLGTFGYHAPEYAMTGQLNAK-------SDVYSFGVVLLEL 155
A D + RV GT Y APE + +N K +D+Y+ G+V E+
Sbjct: 200 ATDTIDIAPNHRV-GTKRYMAPE-VLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 74/165 (44%), Gaps = 19/165 (11%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ ++H N + L + T +L E + G L D L ++ L+ ++
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---------LTEEEAT 117
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDV----AKIADFDLSNQAPDMAAR 116
+ G+ YLH I H D+K N+++ D +V KI DF L+++ D
Sbjct: 118 EFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-DFGNE 173
Query: 117 LHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
+ + GT + APE L ++D++S GV+ LL+G P
Sbjct: 174 FKN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 6/96 (6%)
Query: 69 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 128
GLE LH + I++RD+K N+L+ D +I+D L+ P+ + RV GT GY
Sbjct: 298 GLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPE--GQTIKGRV-GTVGY 351
Query: 129 HAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDH 164
APE + D ++ G +L E++ G+ P
Sbjct: 352 MAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQ 387
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 82/176 (46%), Gaps = 24/176 (13%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEF-ASNGSLHDILHGRKGVKGAQPGPVLSWQQR 59
++ ++HEN + LL +S Y+F + L G+K ++ ++
Sbjct: 76 LLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSE--------EK 127
Query: 60 VKIAV-GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLH 118
++ V KGL+Y+H ++HRD+K N+ + +D KI DF L+ A
Sbjct: 128 IQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHAD-----AE 179
Query: 119 STRVLGTFGYHAPEYAMTG-QLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSL 173
T + T Y APE ++ N D++S G ++ E+LTG+ TL +G+ L
Sbjct: 180 MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK-----TLFKGKDYL 230
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 79/173 (45%), Gaps = 37/173 (21%)
Query: 5 LKHENFVQLLGYCV-------DGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQ 57
L+HEN +LG+ T L ++ +GSL D L+ ++ +
Sbjct: 80 LRHEN---ILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY----------TVTVE 126
Query: 58 QRVKIAVGAAKGLEYLH-----EKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS---NQ 109
+K+A+ A GL +LH + P I HRD+KS N+L+ + IAD L+ +
Sbjct: 127 GMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDS 186
Query: 110 APDMAARLHSTRVLGTFGYHAPEYAMTGQLNAK-------SDVYSFGVVLLEL 155
A D + RV GT Y APE + +N K +D+Y+ G+V E+
Sbjct: 187 ATDTIDIAPNHRV-GTKRYMAPE-VLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 74/165 (44%), Gaps = 19/165 (11%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ ++H N + L + T +L E + G L D L ++ L+ ++
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---------LTEEEAT 117
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDV----AKIADFDLSNQAPDMAAR 116
+ G+ YLH I H D+K N+++ D +V KI DF L+++ D
Sbjct: 118 EFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-DFGNE 173
Query: 117 LHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
+ + GT + APE L ++D++S GV+ LL+G P
Sbjct: 174 FKN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 79/173 (45%), Gaps = 37/173 (21%)
Query: 5 LKHENFVQLLGYCV-------DGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQ 57
L+HEN +LG+ T L ++ +GSL D L+ ++ +
Sbjct: 60 LRHEN---ILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY----------TVTVE 106
Query: 58 QRVKIAVGAAKGLEYLH-----EKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS---NQ 109
+K+A+ A GL +LH + P I HRD+KS N+L+ + IAD L+ +
Sbjct: 107 GMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDS 166
Query: 110 APDMAARLHSTRVLGTFGYHAPEYAMTGQLNAK-------SDVYSFGVVLLEL 155
A D + RV GT Y APE + +N K +D+Y+ G+V E+
Sbjct: 167 ATDTIDIAPNHRV-GTKRYMAPE-VLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 65/160 (40%), Gaps = 18/160 (11%)
Query: 6 KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVG 65
+H N + L DG + E G L D + +K + VL
Sbjct: 74 QHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVL---------FT 124
Query: 66 AAKGLEYLHEKADPHIIHRDIKSSNVLIFDD----DVAKIADFDLSNQAPDMAARLHSTR 121
K +EYLH + ++HRD+K SN+L D+ + +I DF + Q L +
Sbjct: 125 ITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPC 181
Query: 122 VLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
F APE +A D++S GV+L LTG P
Sbjct: 182 YTANFV--APEVLERQGYDAACDIWSLGVLLYTXLTGYTP 219
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 76/166 (45%), Gaps = 17/166 (10%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
+++ H N V+LL + + EF + G++ ++ ++ +P L+ Q
Sbjct: 60 ILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVM-----LELERP---LTESQIQ 111
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+ L YLH D IIHRD+K+ N+L D K+ADF +S + + +
Sbjct: 112 VVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDS 168
Query: 121 RVLGTFGYHAPEYAMTGQ-----LNAKSDVYSFGVVLLELLTGRKP 161
+GT + APE M + K+DV+S G+ L+E+ P
Sbjct: 169 -FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 213
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 74/165 (44%), Gaps = 19/165 (11%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ ++H N + L + T +L E + G L D L ++ L+ ++
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---------LTEEEAT 117
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDV----AKIADFDLSNQAPDMAAR 116
+ G+ YLH I H D+K N+++ D +V KI DF L+++ D
Sbjct: 118 EFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-DFGNE 173
Query: 117 LHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
+ + GT + APE L ++D++S GV+ LL+G P
Sbjct: 174 FKN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 79/173 (45%), Gaps = 37/173 (21%)
Query: 5 LKHENFVQLLGYCV-------DGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQ 57
L+HEN +LG+ T L ++ +GSL D L+ ++ +
Sbjct: 55 LRHEN---ILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY----------TVTVE 101
Query: 58 QRVKIAVGAAKGLEYLH-----EKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS---NQ 109
+K+A+ A GL +LH + P I HRD+KS N+L+ + IAD L+ +
Sbjct: 102 GMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDS 161
Query: 110 APDMAARLHSTRVLGTFGYHAPEYAMTGQLNAK-------SDVYSFGVVLLEL 155
A D + RV GT Y APE + +N K +D+Y+ G+V E+
Sbjct: 162 ATDTIDIAPNHRV-GTKRYMAPE-VLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 79/173 (45%), Gaps = 37/173 (21%)
Query: 5 LKHENFVQLLGYCV-------DGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQ 57
L+HEN +LG+ T L ++ +GSL D L+ ++ +
Sbjct: 54 LRHEN---ILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNR----------YTVTVE 100
Query: 58 QRVKIAVGAAKGLEYLH-----EKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS---NQ 109
+K+A+ A GL +LH + P I HRD+KS N+L+ + IAD L+ +
Sbjct: 101 GMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDS 160
Query: 110 APDMAARLHSTRVLGTFGYHAPEYAMTGQLNAK-------SDVYSFGVVLLEL 155
A D + RV GT Y APE + +N K +D+Y+ G+V E+
Sbjct: 161 ATDTIDIAPNHRV-GTKRYMAPE-VLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 79/173 (45%), Gaps = 37/173 (21%)
Query: 5 LKHENFVQLLGYCV-------DGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQ 57
L+HEN +LG+ T L ++ +GSL D L+ ++ +
Sbjct: 57 LRHEN---ILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY----------TVTVE 103
Query: 58 QRVKIAVGAAKGLEYLH-----EKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS---NQ 109
+K+A+ A GL +LH + P I HRD+KS N+L+ + IAD L+ +
Sbjct: 104 GMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDS 163
Query: 110 APDMAARLHSTRVLGTFGYHAPEYAMTGQLNAK-------SDVYSFGVVLLEL 155
A D + RV GT Y APE + +N K +D+Y+ G+V E+
Sbjct: 164 ATDTIDIAPNHRV-GTKRYMAPE-VLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 64/139 (46%), Gaps = 16/139 (11%)
Query: 24 VLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIH 83
VL E ++G+L L K K + + SW +++ KGL++LH + P IIH
Sbjct: 105 VLVTELXTSGTLKTYL---KRFKVXKIKVLRSWCRQI------LKGLQFLHTRTPP-IIH 154
Query: 84 RDIKSSNVLIFD-DDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAK 142
RD+K N+ I KI D L+ A+ V+GT + APE + +
Sbjct: 155 RDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKA----VIGTPEFXAPE-XYEEKYDES 209
Query: 143 SDVYSFGVVLLELLTGRKP 161
DVY+FG LE T P
Sbjct: 210 VDVYAFGXCXLEXATSEYP 228
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 70/155 (45%), Gaps = 15/155 (9%)
Query: 10 FVQLLGYCVDGTSRV-LAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAK 68
F+ L C R+ E+ + G L + H ++ + +P V A A
Sbjct: 403 FLTQLHSCFQTMDRLYFVMEYVNGGDL--MYHIQQVGRFKEPHAVF-------YAAEIAI 453
Query: 69 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 128
GL +L K II+RD+K NV++ + KIADF + + ++ + + GT Y
Sbjct: 454 GLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKE--NIWDGVTTKXFCGTPDY 508
Query: 129 HAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVD 163
APE D ++FGV+L E+L G+ P +
Sbjct: 509 IAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFE 543
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 71/166 (42%), Gaps = 19/166 (11%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +L H N +L + D L E + G L D + RK S
Sbjct: 79 LLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR---------FSEVDAA 129
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLI---FDDDVAKIADFDLSNQAPDMAARL 117
+I G+ Y H+ I+HRD+K N+L+ D +I DF LS A
Sbjct: 130 RIIRQVLSGITYXHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLSTH---FEASK 183
Query: 118 HSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVD 163
+GT Y APE + G + K DV+S GV+L LL+G P +
Sbjct: 184 KXKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSGCPPFN 228
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 74/165 (44%), Gaps = 19/165 (11%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ ++H N + L + T +L E + G L D L ++ L+ ++
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKES---------LTEEEAT 117
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDV----AKIADFDLSNQAPDMAAR 116
+ G+ YLH I H D+K N+++ D +V KI DF L+++ D
Sbjct: 118 EFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-DFGNE 173
Query: 117 LHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
+ + GT + APE L ++D++S GV+ LL+G P
Sbjct: 174 FKN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 68/164 (41%), Gaps = 22/164 (13%)
Query: 5 LKHENFVQLLGYC-VDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIA 63
+H N V+L C V T R D+ V P P + + +
Sbjct: 71 FEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKV----PEPGVPTETIKDMM 126
Query: 64 VGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHS---- 119
+GL++LH ++HRD+K N+L+ K+ADF L AR++S
Sbjct: 127 FQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGL--------ARIYSFQMA 175
Query: 120 -TRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPV 162
T V+ T Y APE + D++S G + E+ RKP+
Sbjct: 176 LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPL 218
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 81/162 (50%), Gaps = 22/162 (13%)
Query: 1 MVSRLKHENFVQLLG-YCVDGTSRVLAYEFASNGSLHDI-LHGRKGVKGAQPGPVLSWQQ 58
+++ H V+LLG Y DG ++ EF G++ I L +G+ +P + +Q
Sbjct: 61 ILATCDHPYIVKLLGAYYHDGKLWIM-IEFCPGGAVDAIMLELDRGL--TEPQIQVVCRQ 117
Query: 59 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLH 118
++ L +LH K IIHRD+K+ NVL+ + ++ADF +S A ++
Sbjct: 118 MLE-------ALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVS--AKNLKTLQK 165
Query: 119 STRVLGTFGYHAPEYAMTGQL-----NAKSDVYSFGVVLLEL 155
+GT + APE M + + K+D++S G+ L+E+
Sbjct: 166 RDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 207
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 81/162 (50%), Gaps = 22/162 (13%)
Query: 1 MVSRLKHENFVQLLG-YCVDGTSRVLAYEFASNGSLHDI-LHGRKGVKGAQPGPVLSWQQ 58
+++ H V+LLG Y DG ++ EF G++ I L +G+ +P + +Q
Sbjct: 69 ILATCDHPYIVKLLGAYYHDGKLWIM-IEFCPGGAVDAIMLELDRGL--TEPQIQVVCRQ 125
Query: 59 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLH 118
++ L +LH K IIHRD+K+ NVL+ + ++ADF +S A ++
Sbjct: 126 MLE-------ALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVS--AKNLKTLQK 173
Query: 119 STRVLGTFGYHAPEYAMTGQL-----NAKSDVYSFGVVLLEL 155
+GT + APE M + + K+D++S G+ L+E+
Sbjct: 174 RDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 215
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 81/179 (45%), Gaps = 24/179 (13%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +L H +++ + D + E G L D + G K +K A L + Q +
Sbjct: 68 ILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCK--LYFYQML 124
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIF---DDDVAKIADFDLSNQAPDMAARL 117
+AV +YLHE IIHRD+K NVL+ +D + KI DF S + + L
Sbjct: 125 -LAV------QYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS--L 172
Query: 118 HSTRVLGTFGYHAPEYAM---TGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSL 173
T + GT Y APE + T N D +S GV+L L+G P R Q SL
Sbjct: 173 MRT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH--RTQVSL 228
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 81/179 (45%), Gaps = 24/179 (13%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +L H +++ + D + E G L D + G K +K A L + Q +
Sbjct: 68 ILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCK--LYFYQML 124
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIF---DDDVAKIADFDLSNQAPDMAARL 117
+AV +YLHE IIHRD+K NVL+ +D + KI DF S + + L
Sbjct: 125 -LAV------QYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS--L 172
Query: 118 HSTRVLGTFGYHAPEYAM---TGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSL 173
T + GT Y APE + T N D +S GV+L L+G P R Q SL
Sbjct: 173 MRT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH--RTQVSL 228
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 68/164 (41%), Gaps = 22/164 (13%)
Query: 5 LKHENFVQLLGYC-VDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIA 63
+H N V+L C V T R D+ V P P + + +
Sbjct: 71 FEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKV----PEPGVPTETIKDMM 126
Query: 64 VGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHS---- 119
+GL++LH ++HRD+K N+L+ K+ADF L AR++S
Sbjct: 127 FQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGL--------ARIYSFQMA 175
Query: 120 -TRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPV 162
T V+ T Y APE + D++S G + E+ RKP+
Sbjct: 176 LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPL 218
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 5/94 (5%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQA-PDMAARLHSTRVLGTF 126
+GL+Y+H +++HRD+K SN+L+ KI DF L+ A PD + T
Sbjct: 139 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATR 195
Query: 127 GYHAPEYAMTGQLNAKS-DVYSFGVVLLELLTGR 159
Y APE + + KS D++S G +L E+L+ R
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 81/179 (45%), Gaps = 24/179 (13%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +L H +++ + D + E G L D + G K +K A L + Q +
Sbjct: 74 ILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCK--LYFYQML 130
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIF---DDDVAKIADFDLSNQAPDMAARL 117
+AV +YLHE IIHRD+K NVL+ +D + KI DF S + + L
Sbjct: 131 -LAV------QYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS--L 178
Query: 118 HSTRVLGTFGYHAPEYAM---TGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSL 173
T + GT Y APE + T N D +S GV+L L+G P R Q SL
Sbjct: 179 MRT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH--RTQVSL 234
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 5/94 (5%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQA-PDMAARLHSTRVLGTF 126
+GL+Y+H +++HRD+K SN+L+ KI DF L+ A PD + T
Sbjct: 140 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATR 196
Query: 127 GYHAPEYAMTGQLNAKS-DVYSFGVVLLELLTGR 159
Y APE + + KS D++S G +L E+L+ R
Sbjct: 197 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 81/179 (45%), Gaps = 24/179 (13%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +L H +++ + D + E G L D + G K +K A L + Q +
Sbjct: 67 ILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCK--LYFYQML 123
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIF---DDDVAKIADFDLSNQAPDMAARL 117
+AV +YLHE IIHRD+K NVL+ +D + KI DF S + + L
Sbjct: 124 -LAV------QYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS--L 171
Query: 118 HSTRVLGTFGYHAPEYAM---TGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSL 173
T + GT Y APE + T N D +S GV+L L+G P R Q SL
Sbjct: 172 MRT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH--RTQVSL 227
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 48/93 (51%), Gaps = 9/93 (9%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 127
KGL Y+H IIHRD+K N+ + +D KI DF L+ QA TR
Sbjct: 139 KGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVVTR-----W 190
Query: 128 YHAPEYAMTGQLNAKS-DVYSFGVVLLELLTGR 159
Y APE + ++ D++S G ++ E++TG+
Sbjct: 191 YRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 81/179 (45%), Gaps = 24/179 (13%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +L H +++ + D + E G L D + G K +K A L + Q +
Sbjct: 68 ILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCK--LYFYQML 124
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIF---DDDVAKIADFDLSNQAPDMAARL 117
+AV +YLHE IIHRD+K NVL+ +D + KI DF S + + L
Sbjct: 125 -LAV------QYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS--L 172
Query: 118 HSTRVLGTFGYHAPEYAM---TGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSL 173
T + GT Y APE + T N D +S GV+L L+G P R Q SL
Sbjct: 173 MRT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH--RTQVSL 228
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 73/184 (39%), Gaps = 50/184 (27%)
Query: 5 LKHENFVQLL----GYCVDG-TSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQR 59
++H+N + + DG +L E+ NGSL L W
Sbjct: 64 MEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS----------DWVSS 113
Query: 60 VKIAVGAAKGLEYLHEKA------DPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDM 113
++A +GL YLH + P I HRD+ S NVL+ +D I+DF LS
Sbjct: 114 CRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLS------ 167
Query: 114 AARLHSTRV-------------LGTFGYHAPEYAMTGQLNAKS--------DVYSFGVVL 152
RL R+ +GT Y APE + G +N + D+Y+ G++
Sbjct: 168 -MRLTGNRLVRPGEEDNAAISEVGTIRYMAPE-VLEGAVNLRDXESALKQVDMYALGLIY 225
Query: 153 LELL 156
E+
Sbjct: 226 WEIF 229
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 68/164 (41%), Gaps = 22/164 (13%)
Query: 5 LKHENFVQLLGYC-VDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIA 63
+H N V+L C V T R D+ V P P + + +
Sbjct: 71 FEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKV----PEPGVPTETIKDMM 126
Query: 64 VGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHS---- 119
+GL++LH ++HRD+K N+L+ K+ADF L AR++S
Sbjct: 127 FQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGL--------ARIYSFQMA 175
Query: 120 -TRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPV 162
T V+ T Y APE + D++S G + E+ RKP+
Sbjct: 176 LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPL 218
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 70/155 (45%), Gaps = 15/155 (9%)
Query: 10 FVQLLGYCVDGTSRV-LAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAK 68
F+ L C R+ E+ + G L + H ++ + +P V A A
Sbjct: 82 FLTQLHSCFQTMDRLYFVMEYVNGGDL--MYHIQQVGRFKEPHAVF-------YAAEIAI 132
Query: 69 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 128
GL +L K II+RD+K NV++ + KIADF + + ++ + + GT Y
Sbjct: 133 GLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKE--NIWDGVTTKXFCGTPDY 187
Query: 129 HAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVD 163
APE D ++FGV+L E+L G+ P +
Sbjct: 188 IAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFE 222
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 81/179 (45%), Gaps = 24/179 (13%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +L H +++ + D + E G L D + G K +K A L + Q +
Sbjct: 193 ILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCK--LYFYQML 249
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIF---DDDVAKIADFDLSNQAPDMAARL 117
+AV +YLHE IIHRD+K NVL+ +D + KI DF S + + L
Sbjct: 250 -LAV------QYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS--L 297
Query: 118 HSTRVLGTFGYHAPEYAM---TGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSL 173
T + GT Y APE + T N D +S GV+L L+G P R Q SL
Sbjct: 298 MRT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH--RTQVSL 353
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 75/164 (45%), Gaps = 24/164 (14%)
Query: 5 LKHENFVQLLGYCVD--GTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKI 62
H N + +LG C L + GSL+++LH V+ Q VK
Sbjct: 64 FSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNF-------VVDQSQAVKF 116
Query: 63 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKI--ADFDLSNQAPDMAARLHST 120
A+ A+G+ +LH +P I + S +V+I +D A+I AD S Q+P R+++
Sbjct: 117 ALDMARGMAFLH-TLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSP---GRMYAP 172
Query: 121 RVLGTFGYHAPEYAMTG--QLNAKS-DVYSFGVVLLELLTGRKP 161
+ APE N +S D++SF V+L EL+T P
Sbjct: 173 ------AWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVP 210
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 81/179 (45%), Gaps = 24/179 (13%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ +L H +++ + D + E G L D + G K +K A L + Q +
Sbjct: 207 ILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCK--LYFYQML 263
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIF---DDDVAKIADFDLSNQAPDMAARL 117
+AV +YLHE IIHRD+K NVL+ +D + KI DF S + + L
Sbjct: 264 -LAV------QYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS--L 311
Query: 118 HSTRVLGTFGYHAPEYAM---TGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSL 173
T + GT Y APE + T N D +S GV+L L+G P R Q SL
Sbjct: 312 MRT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH--RTQVSL 367
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 74/160 (46%), Gaps = 14/160 (8%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ L H N V+LL L +EF S L D + + G P P++
Sbjct: 57 LLKELNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDA-SALTGI-PLPLIK----- 108
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+GL + H ++HRD+K N+LI + K+ADF L+ +A + R +
Sbjct: 109 SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXH 164
Query: 121 RVLGTFGYHAPEYAMTGQLNAKS-DVYSFGVVLLELLTGR 159
V+ T Y APE + + + + D++S G + E++T R
Sbjct: 165 EVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 53/101 (52%), Gaps = 9/101 (8%)
Query: 66 AAKGLEYLHEKADPHIIHRDIKSSNVLIFDD-DVAKIADFD--LSNQAPDMAAR--LHST 120
A +GLEYLH + I+H D+K+ NVL+ D A + DF L Q PD + L
Sbjct: 159 ALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQ-PDGLGKSLLTGD 214
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
+ GT + APE M +AK D++S ++L +L G P
Sbjct: 215 YIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 255
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 97/249 (38%), Gaps = 37/249 (14%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
M+S+L H++ V G C G +L EF GSL L K + W ++
Sbjct: 65 MMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCIN------ILW--KL 116
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIAD---FDLSNQAPDMAARL 117
++A A + +L E +IH ++ + N+L+ ++ K + LS+ P ++ +
Sbjct: 117 EVAKQLAWAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSD--PGISITV 171
Query: 118 HSTRVLGTFGYHAPEYAMTG--QLNAKSDVYSFGVVLLELLT-GRKPVDHTLPRGQQSLV 174
+L P + LN +D +SFG L E+ + G KP+ +L
Sbjct: 172 LPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPL--------SALD 223
Query: 175 TWATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXXLCVQYEADFRPNMSIVVKALQPL 234
+ + ED+ P C+ YE D RP+ +++ L L
Sbjct: 224 SQRKLQFYEDR----------HQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSL 273
Query: 235 LNARPGPAG 243
P G
Sbjct: 274 FTPDLVPRG 282
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 74/160 (46%), Gaps = 14/160 (8%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ L H N V+LL L +EF S L D + + G P P++
Sbjct: 58 LLKELNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDA-SALTGI-PLPLIK----- 109
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+GL + H ++HRD+K N+LI + K+ADF L+ +A + R +
Sbjct: 110 SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXH 165
Query: 121 RVLGTFGYHAPEYAMTGQLNAKS-DVYSFGVVLLELLTGR 159
V+ T Y APE + + + + D++S G + E++T R
Sbjct: 166 EVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Query: 69 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 128
G+++LH IIHRD+K SN+++ D KI DF L+ A T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA---CTNFMMTPYVVTRYY 191
Query: 129 HAPEYAMTGQLNAKSDVYSFGVVLLELLTG 158
APE + A D++S G ++ EL+ G
Sbjct: 192 RAPEVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 94/198 (47%), Gaps = 13/198 (6%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKG-----AQPGPVLS 55
++ RL H+N V++ S+ L + S L+ + ++ ++ + GP+L
Sbjct: 61 IIRRLDHDNIVKVFEILGPSGSQ-LTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLE 119
Query: 56 WQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDD-VAKIADFDLSN-QAPDM 113
R+ +GL+Y+H +++HRD+K +N+ I +D V KI DF L+ P
Sbjct: 120 EHARL-FMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHY 175
Query: 114 AARLHSTRVLGTFGYHAPEYAMTGQLNAKS-DVYSFGVVLLELLTGRKPVDHTLPRGQQS 172
+ + H + L T Y +P ++ K+ D+++ G + E+LTG+ Q
Sbjct: 176 SHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQ 235
Query: 173 LVTWATPKLSEDKVRQCV 190
L+ + P + E+ ++ +
Sbjct: 236 LILESIPVVHEEDRQELL 253
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 53/101 (52%), Gaps = 9/101 (8%)
Query: 66 AAKGLEYLHEKADPHIIHRDIKSSNVLIFDD-DVAKIADFD--LSNQAPDMAAR--LHST 120
A +GLEYLH + I+H D+K+ NVL+ D A + DF L Q PD + L
Sbjct: 173 ALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQ-PDGLGKSLLTGD 228
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
+ GT + APE M +AK D++S ++L +L G P
Sbjct: 229 YIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 269
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 53/101 (52%), Gaps = 9/101 (8%)
Query: 66 AAKGLEYLHEKADPHIIHRDIKSSNVLIFDD-DVAKIADFD--LSNQAPDMAAR--LHST 120
A +GLEYLH + I+H D+K+ NVL+ D A + DF L Q PD + L
Sbjct: 175 ALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQ-PDGLGKSLLTGD 230
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
+ GT + APE M +AK D++S ++L +L G P
Sbjct: 231 YIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 271
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 76/187 (40%), Gaps = 22/187 (11%)
Query: 2 VSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVK 61
+ L+H++ QL + E+ G L D + + + + V +++
Sbjct: 62 LKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVF---RQIV 118
Query: 62 IAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTR 121
AV Y+H + HRD+K N+L + K+ DF L + P H
Sbjct: 119 SAVA------YVHSQG---YAHRDLKPENLLFDEYHKLKLIDFGLCAK-PKGNKDYHLQT 168
Query: 122 VLGTFGYHAPEYAM-TGQLNAKSDVYSFGVVLLELLTGRKPVD--------HTLPRGQQS 172
G+ Y APE L +++DV+S G++L L+ G P D + RG+
Sbjct: 169 CCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYD 228
Query: 173 LVTWATP 179
+ W +P
Sbjct: 229 VPKWLSP 235
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 76/163 (46%), Gaps = 15/163 (9%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ LKH+N V+L L +EF + L G P V S+ ++
Sbjct: 54 LLKELKHKNIVRLHDVLHSDKKLTLVFEFC-DQDLKKYFDSCNG--DLDPEIVKSFLFQL 110
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
KGL + H + +++HRD+K N+LI + K+ADF L+ +A + R +S
Sbjct: 111 ------LKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLADFGLA-RAFGIPVRCYSA 160
Query: 121 RVLGTFGYHAPEYAMTGQLNAKS-DVYSFGVVLLELLTGRKPV 162
V+ T Y P+ +L + S D++S G + EL +P+
Sbjct: 161 EVV-TLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPL 202
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 73/161 (45%), Gaps = 19/161 (11%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASN--GSLHDILHGRKGVKGAQPGPVLSWQQ 58
++ LKH N V+L VL +E L D+ G G++ L
Sbjct: 53 ILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEG--GLESVTAKSFL---- 106
Query: 59 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLH 118
+ G+ Y H D ++HRD+K N+LI + KIADF L+ +A + R +
Sbjct: 107 -----LQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLA-RAFGIPVRKY 157
Query: 119 STRVLGTFGYHAPEYAM-TGQLNAKSDVYSFGVVLLELLTG 158
+ V+ T Y AP+ M + + + D++S G + E++ G
Sbjct: 158 THEVV-TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 5/93 (5%)
Query: 69 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 128
LEYLH + +++RDIK N+++ D KI DF L + A + + GT Y
Sbjct: 117 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT--FCGTPEY 171
Query: 129 HAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
APE D + GVV+ E++ GR P
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 72/163 (44%), Gaps = 18/163 (11%)
Query: 2 VSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVK 61
+S L+H V L D V+ YEF S G L + K A +S + V+
Sbjct: 208 MSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFE--------KVADEHNKMSEDEAVE 259
Query: 62 IAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFD--DDVAKIADFDLSNQA-PDMAARLH 118
KGL ++HE + +H D+K N++ + K+ DF L+ P + ++
Sbjct: 260 YMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKV- 315
Query: 119 STRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
GT + APE A + +D++S GV+ LL+G P
Sbjct: 316 ---TTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSP 355
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 73/161 (45%), Gaps = 19/161 (11%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASN--GSLHDILHGRKGVKGAQPGPVLSWQQ 58
++ LKH N V+L VL +E L D+ G G++ L
Sbjct: 53 ILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEG--GLESVTAKSFL---- 106
Query: 59 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLH 118
+ G+ Y H D ++HRD+K N+LI + KIADF L+ +A + R +
Sbjct: 107 -----LQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLA-RAFGIPVRKY 157
Query: 119 STRVLGTFGYHAPEYAM-TGQLNAKSDVYSFGVVLLELLTG 158
+ V+ T Y AP+ M + + + D++S G + E++ G
Sbjct: 158 THEVV-TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Query: 69 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 128
G+++LH IIHRD+K SN+++ D KI DF L+ A T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA---GTSFMMTPYVVTRYY 191
Query: 129 HAPEYAMTGQLNAKSDVYSFGVVLLELLTG 158
APE + D++S GV++ E++ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 5/93 (5%)
Query: 69 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 128
LEYLH + +++RDIK N+++ D KI DF L + A + + GT Y
Sbjct: 120 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT--FCGTPEY 174
Query: 129 HAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
APE D + GVV+ E++ GR P
Sbjct: 175 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 207
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 5/93 (5%)
Query: 69 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 128
LEYLH + +++RDIK N+++ D KI DF L + A + + GT Y
Sbjct: 117 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT--FCGTPEY 171
Query: 129 HAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
APE D + GVV+ E++ GR P
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 72/163 (44%), Gaps = 18/163 (11%)
Query: 2 VSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVK 61
+S L+H V L D V+ YEF S G L + K A +S + V+
Sbjct: 102 MSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFE--------KVADEHNKMSEDEAVE 153
Query: 62 IAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFD--DDVAKIADFDLSNQA-PDMAARLH 118
KGL ++HE + +H D+K N++ + K+ DF L+ P + ++
Sbjct: 154 YMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKV- 209
Query: 119 STRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
GT + APE A + +D++S GV+ LL+G P
Sbjct: 210 ---TTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSP 249
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 4/93 (4%)
Query: 69 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 128
L+YLH ++ ++++RD+K N+++ D KI DF L + A + + GT Y
Sbjct: 263 ALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT--FCGTPEY 318
Query: 129 HAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
APE D + GVV+ E++ GR P
Sbjct: 319 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 351
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Query: 69 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 128
G+++LH IIHRD+K SN+++ D KI DF L+ A T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA---GTSFMMTPYVVTRYY 191
Query: 129 HAPEYAMTGQLNAKSDVYSFGVVLLELLTG 158
APE + D++S GV++ E++ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 4/93 (4%)
Query: 69 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 128
L+YLH ++ ++++RD+K N+++ D KI DF L + A + + GT Y
Sbjct: 260 ALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT--FCGTPEY 315
Query: 129 HAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
APE D + GVV+ E++ GR P
Sbjct: 316 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 348
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 66 AAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDV-AKIADFDLS-NQAPDMAAR--LHSTR 121
A +GLEYLH + I+H D+K+ NVL+ D A + DF + PD + L
Sbjct: 194 ALEGLEYLHSR---RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDY 250
Query: 122 VLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
+ GT + APE + +AK DV+S ++L +L G P
Sbjct: 251 IPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHP 290
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 81/172 (47%), Gaps = 35/172 (20%)
Query: 5 LKHENFVQLLGYCV-DGTSR------VLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQ 57
L+HEN +LG+ D TSR L + GSL+D L L
Sbjct: 88 LRHEN---ILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQL----------TTLDTV 134
Query: 58 QRVKIAVGAAKGLEYLH-----EKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS---NQ 109
++I + A GL +LH + P I HRD+KS N+L+ + IAD L+ +Q
Sbjct: 135 SCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQ 194
Query: 110 APDMAARLHSTRVLGTFGYHAPEYA-MTGQLNA-----KSDVYSFGVVLLEL 155
+ + ++ RV GT Y APE T Q++ + D+++FG+VL E+
Sbjct: 195 STNQLDVGNNPRV-GTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 66/160 (41%), Gaps = 18/160 (11%)
Query: 6 KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVG 65
+H N + L DG L E G L D + +K + VL +G
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLH-------TIG 131
Query: 66 AAKGLEYLHEKADPHIIHRDIKSSNVLIFDD----DVAKIADFDLSNQAPDMAARLHSTR 121
K +EYLH + ++HRD+K SN+L D+ + +I DF + Q L +
Sbjct: 132 --KTVEYLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPC 186
Query: 122 VLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
F APE + D++S G++L +L G P
Sbjct: 187 YTANFV--APEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 73/161 (45%), Gaps = 19/161 (11%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASN--GSLHDILHGRKGVKGAQPGPVLSWQQ 58
++ LKH N V+L VL +E L D+ G G++ L
Sbjct: 53 ILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEG--GLESVTAKSFL---- 106
Query: 59 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLH 118
+ G+ Y H D ++HRD+K N+LI + KIADF L+ +A + R +
Sbjct: 107 -----LQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLA-RAFGIPVRKY 157
Query: 119 STRVLGTFGYHAPEYAM-TGQLNAKSDVYSFGVVLLELLTG 158
+ ++ T Y AP+ M + + + D++S G + E++ G
Sbjct: 158 THEIV-TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 81/172 (47%), Gaps = 35/172 (20%)
Query: 5 LKHENFVQLLGYCV-DGTSR------VLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQ 57
L+HEN +LG+ D TSR L + GSL+D L L
Sbjct: 59 LRHEN---ILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQL----------TTLDTV 105
Query: 58 QRVKIAVGAAKGLEYLH-----EKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS---NQ 109
++I + A GL +LH + P I HRD+KS N+L+ + IAD L+ +Q
Sbjct: 106 SCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQ 165
Query: 110 APDMAARLHSTRVLGTFGYHAPEYA-MTGQLNA-----KSDVYSFGVVLLEL 155
+ + ++ RV GT Y APE T Q++ + D+++FG+VL E+
Sbjct: 166 STNQLDVGNNPRV-GTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 66 AAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDV-AKIADFDLS-NQAPDMAAR--LHSTR 121
A +GLEYLH + I+H D+K+ NVL+ D A + DF + PD + L
Sbjct: 175 ALEGLEYLHSR---RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDY 231
Query: 122 VLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
+ GT + APE + +AK DV+S ++L +L G P
Sbjct: 232 IPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHP 271
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 81/172 (47%), Gaps = 35/172 (20%)
Query: 5 LKHENFVQLLGYCV-DGTSR------VLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQ 57
L+HEN +LG+ D TSR L + GSL+D L L
Sbjct: 59 LRHEN---ILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQL----------TTLDTV 105
Query: 58 QRVKIAVGAAKGLEYLH-----EKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS---NQ 109
++I + A GL +LH + P I HRD+KS N+L+ + IAD L+ +Q
Sbjct: 106 SCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQ 165
Query: 110 APDMAARLHSTRVLGTFGYHAPEYA-MTGQLNA-----KSDVYSFGVVLLEL 155
+ + ++ RV GT Y APE T Q++ + D+++FG+VL E+
Sbjct: 166 STNQLDVGNNPRV-GTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 66/160 (41%), Gaps = 18/160 (11%)
Query: 6 KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVG 65
+H N + L DG L E G L D + +K + VL +G
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLH-------TIG 131
Query: 66 AAKGLEYLHEKADPHIIHRDIKSSNVLIFDD----DVAKIADFDLSNQAPDMAARLHSTR 121
K +EYLH + ++HRD+K SN+L D+ + +I DF + Q L +
Sbjct: 132 --KTVEYLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPC 186
Query: 122 VLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
F APE + D++S G++L +L G P
Sbjct: 187 YTANFV--APEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 54/98 (55%), Gaps = 16/98 (16%)
Query: 69 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADF----DLSNQAPDMAARLHSTRVLG 124
GLE++H + +++RD+K +N+L+ + +I+D D S + P H++ +G
Sbjct: 303 GLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP------HAS--VG 351
Query: 125 TFGYHAPEYAMTG-QLNAKSDVYSFGVVLLELLTGRKP 161
T GY APE G ++ +D +S G +L +LL G P
Sbjct: 352 THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 389
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 74/160 (46%), Gaps = 14/160 (8%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ L H N V+LL L +EF + L D + + G P P++
Sbjct: 55 LLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKDFMDA-SALTGI-PLPLIK----- 106
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+GL + H ++HRD+K N+LI + K+ADF L+ +A + R +
Sbjct: 107 SYLFQLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLA-RAFGVPVRTYXH 162
Query: 121 RVLGTFGYHAPEYAMTGQLNAKS-DVYSFGVVLLELLTGR 159
V+ T Y APE + + + + D++S G + E++T R
Sbjct: 163 EVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 54/98 (55%), Gaps = 16/98 (16%)
Query: 69 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADF----DLSNQAPDMAARLHSTRVLG 124
GLE++H + +++RD+K +N+L+ + +I+D D S + P H++ +G
Sbjct: 304 GLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP------HAS--VG 352
Query: 125 TFGYHAPEYAMTG-QLNAKSDVYSFGVVLLELLTGRKP 161
T GY APE G ++ +D +S G +L +LL G P
Sbjct: 353 THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 54/98 (55%), Gaps = 16/98 (16%)
Query: 69 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADF----DLSNQAPDMAARLHSTRVLG 124
GLE++H + +++RD+K +N+L+ + +I+D D S + P H++ +G
Sbjct: 304 GLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP------HAS--VG 352
Query: 125 TFGYHAPEYAMTG-QLNAKSDVYSFGVVLLELLTGRKP 161
T GY APE G ++ +D +S G +L +LL G P
Sbjct: 353 THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 54/98 (55%), Gaps = 16/98 (16%)
Query: 69 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADF----DLSNQAPDMAARLHSTRVLG 124
GLE++H + +++RD+K +N+L+ + +I+D D S + P H++ +G
Sbjct: 304 GLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP------HAS--VG 352
Query: 125 TFGYHAPEYAMTG-QLNAKSDVYSFGVVLLELLTGRKP 161
T GY APE G ++ +D +S G +L +LL G P
Sbjct: 353 THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 44/93 (47%), Gaps = 5/93 (5%)
Query: 69 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 128
LEYLH + +++RDIK N+++ D KI DF L + A + GT Y
Sbjct: 122 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKX--FCGTPEY 176
Query: 129 HAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
APE D + GVV+ E++ GR P
Sbjct: 177 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Query: 69 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 128
G+++LH IIHRD+K SN+++ D KI DF L+ A + T + T Y
Sbjct: 136 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA---STNFMMTPYVVTRYY 189
Query: 129 HAPEYAMTGQLNAKSDVYSFGVVLLELLTG 158
APE + D++S G ++ EL+ G
Sbjct: 190 RAPEVILGMGYKENVDIWSVGCIMGELVKG 219
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 71/164 (43%), Gaps = 18/164 (10%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ ++KH N V L G L + S G L D + KG + L +Q
Sbjct: 69 VLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI-VEKGFYTERDASRLIFQ--- 124
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIF---DDDVAKIADFDLSNQAPDMAARL 117
++YLH D I+HRD+K N+L + +D I+DF LS + D + L
Sbjct: 125 -----VLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLS-KMEDPGSVL 175
Query: 118 HSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
+ GT GY APE + D +S GV+ LL G P
Sbjct: 176 STA--CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 71/164 (43%), Gaps = 18/164 (10%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ ++KH N V L G L + S G L D + KG + L +Q
Sbjct: 69 VLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI-VEKGFYTERDASRLIFQ--- 124
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIF---DDDVAKIADFDLSNQAPDMAARL 117
++YLH D I+HRD+K N+L + +D I+DF LS + D + L
Sbjct: 125 -----VLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLS-KMEDPGSVL 175
Query: 118 HSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
+ GT GY APE + D +S GV+ LL G P
Sbjct: 176 STA--CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 44/93 (47%), Gaps = 5/93 (5%)
Query: 69 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 128
LEYLH + +++RDIK N+++ D KI DF L + A + GT Y
Sbjct: 117 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKX--FCGTPEY 171
Query: 129 HAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
APE D + GVV+ E++ GR P
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 71/164 (43%), Gaps = 18/164 (10%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ ++KH N V L G L + S G L D + KG + L +Q
Sbjct: 69 VLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI-VEKGFYTERDASRLIFQ--- 124
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIF---DDDVAKIADFDLSNQAPDMAARL 117
++YLH D I+HRD+K N+L + +D I+DF LS + D + L
Sbjct: 125 -----VLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLS-KMEDPGSVL 175
Query: 118 HSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
+ GT GY APE + D +S GV+ LL G P
Sbjct: 176 STA--CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 44/93 (47%), Gaps = 5/93 (5%)
Query: 69 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 128
LEYLH + +++RDIK N+++ D KI DF L + A + GT Y
Sbjct: 117 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKX--FCGTPEY 171
Query: 129 HAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
APE D + GVV+ E++ GR P
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 44/93 (47%), Gaps = 5/93 (5%)
Query: 69 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 128
LEYLH + +++RDIK N+++ D KI DF L + A + GT Y
Sbjct: 117 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKX--FCGTPEY 171
Query: 129 HAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
APE D + GVV+ E++ GR P
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 71/164 (43%), Gaps = 18/164 (10%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ ++KH N V L G L + S G L D + KG + L +Q
Sbjct: 69 VLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI-VEKGFYTERDASRLIFQ--- 124
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIF---DDDVAKIADFDLSNQAPDMAARL 117
++YLH D I+HRD+K N+L + +D I+DF LS + D + L
Sbjct: 125 -----VLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLS-KMEDPGSVL 175
Query: 118 HSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
+ GT GY APE + D +S GV+ LL G P
Sbjct: 176 STA--CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 5/95 (5%)
Query: 69 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 128
L YLHE+ II+RD+K NVL+ + K+ D+ + + + ++ GT Y
Sbjct: 122 ALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEG--LRPGDTTSXFCGTPNY 176
Query: 129 HAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVD 163
APE D ++ GV++ E++ GR P D
Sbjct: 177 IAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 211
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 67/161 (41%), Gaps = 18/161 (11%)
Query: 4 RLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIA 63
RL H N ++L T L E + G L D R KG S +
Sbjct: 104 RLSHPNIIKLKEIFETPTEISLVLELVTGGELFD----RIVEKG-----YYSERDAADAV 154
Query: 64 VGAAKGLEYLHEKADPHIIHRDIKSSNVLIFD---DDVAKIADFDLSNQAPDMAARLHST 120
+ + YLHE I+HRD+K N+L D KIADF LS + ++
Sbjct: 155 KQILEAVAYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKI---VEHQVLMK 208
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
V GT GY APE + D++S G++ LL G +P
Sbjct: 209 TVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEP 249
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 5/95 (5%)
Query: 69 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 128
L YLHE+ II+RD+K NVL+ + K+ D+ + + + ++ GT Y
Sbjct: 165 ALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEG--LRPGDTTSTFCGTPNY 219
Query: 129 HAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVD 163
APE D ++ GV++ E++ GR P D
Sbjct: 220 IAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 254
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 75/167 (44%), Gaps = 28/167 (16%)
Query: 5 LKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDIL--HGRKGVKGAQPGPVLSWQQRVKI 62
L+H N V+ + T + E+AS G L + + GR A+ +QQ +
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEAR----FFFQQLI-- 125
Query: 63 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVA---KIADFDLSNQAPDMAARLHS 119
G+ Y H + HRD+K N L+ D A KIADF S A+ LHS
Sbjct: 126 -----SGVSYAHAM---QVAHRDLKLENTLL-DGSPAPRLKIADFGYSK-----ASVLHS 171
Query: 120 --TRVLGTFGYHAPEYAMTGQLNAK-SDVYSFGVVLLELLTGRKPVD 163
+GT Y APE + + + K +DV+S GV L +L G P +
Sbjct: 172 QPKSAVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFE 218
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 5/95 (5%)
Query: 69 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 128
L YLHE+ II+RD+K NVL+ + K+ D+ + + + ++ GT Y
Sbjct: 118 ALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEG--LRPGDTTSXFCGTPNY 172
Query: 129 HAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVD 163
APE D ++ GV++ E++ GR P D
Sbjct: 173 IAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 207
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 18/162 (11%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQ--PGPVLSWQQ 58
++ L H N V+LL L +EF LH L P P++
Sbjct: 55 LLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK--- 106
Query: 59 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLH 118
+GL + H ++HRD+K N+LI + K+ADF L+ +A + R +
Sbjct: 107 --SYLFQLLQGLSFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTY 160
Query: 119 STRVLGTFGYHAPEYAMTGQLNAKS-DVYSFGVVLLELLTGR 159
+ V+ T Y APE + + + + D++S G + E++T R
Sbjct: 161 THEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 5/95 (5%)
Query: 69 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 128
L YLHE+ II+RD+K NVL+ + K+ D+ + + + ++ GT Y
Sbjct: 133 ALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEG--LRPGDTTSXFCGTPNY 187
Query: 129 HAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVD 163
APE D ++ GV++ E++ GR P D
Sbjct: 188 IAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 222
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 18/162 (11%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQ--PGPVLSWQQ 58
++ L H N V+LL L +EF LH L P P++
Sbjct: 62 LLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK--- 113
Query: 59 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLH 118
+GL + H ++HRD+K N+LI + K+ADF L+ +A + R +
Sbjct: 114 --SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTY 167
Query: 119 STRVLGTFGYHAPEYAMTGQLNAKS-DVYSFGVVLLELLTGR 159
+ V+ T Y APE + + + + D++S G + E++T R
Sbjct: 168 THEVV-TLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 18/162 (11%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQ--PGPVLSWQQ 58
++ L H N V+LL L +EF LH L P P++
Sbjct: 62 LLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK--- 113
Query: 59 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLH 118
+GL + H ++HRD+K N+LI + K+ADF L+ +A + R +
Sbjct: 114 --SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTY 167
Query: 119 STRVLGTFGYHAPEYAMTGQLNAKS-DVYSFGVVLLELLTGR 159
+ V+ T Y APE + + + + D++S G + E++T R
Sbjct: 168 THEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 59/134 (44%), Gaps = 7/134 (5%)
Query: 29 FASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKS 88
F +G LH L + G P L Q V+ V A G+EYL + + IHRD+ +
Sbjct: 112 FMKHGDLHAFLLASR--IGENPFN-LPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAA 165
Query: 89 SNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSF 148
N ++ +D +ADF LS + + A E SDV++F
Sbjct: 166 RNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAF 225
Query: 149 GVVLLELLT-GRKP 161
GV + E++T G+ P
Sbjct: 226 GVTMWEIMTRGQTP 239
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 69/167 (41%), Gaps = 28/167 (16%)
Query: 5 LKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAV 64
L+ NFV+ ++ + E+ N +L+D++H + W+ +I
Sbjct: 72 LERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDE----YWRLFRQIL- 126
Query: 65 GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDL--------------SNQA 110
+ L Y+H + IIHR++K N+ I + KI DF L S
Sbjct: 127 ---EALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 111 PDMAARLHSTRVLGTFGYHAPEYA-MTGQLNAKSDVYSFGVVLLELL 156
P + L T +GT Y A E TG N K D YS G++ E +
Sbjct: 181 PGSSDNL--TSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 79/173 (45%), Gaps = 32/173 (18%)
Query: 5 LKHENFVQLLGYCVDGTSRV--------LAYEFASN---GSLHDILHGRKGVKGAQPGPV 53
LKHEN V L+ C S L ++F + G L ++L VK
Sbjct: 74 LKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL-----VKFT----- 123
Query: 54 LSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQ---A 110
LS +RV + GL Y+H I+HRD+K++NVLI D V K+ADF L+ A
Sbjct: 124 LSEIKRVMQML--LNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLA 178
Query: 111 PDMAARLHSTRVLGTFGYHAPEYAMTGQ-LNAKSDVYSFGVVLLELLTGRKPV 162
+ + RV+ T Y PE + + D++ G ++ E+ T R P+
Sbjct: 179 KNSQPNRYXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPI 229
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 18/162 (11%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQ--PGPVLSWQQ 58
++ L H N V+LL L +EF LH L P P++
Sbjct: 54 LLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK--- 105
Query: 59 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLH 118
+GL + H ++HRD+K N+LI + K+ADF L+ +A + R +
Sbjct: 106 --SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTY 159
Query: 119 STRVLGTFGYHAPEYAMTGQLNAKS-DVYSFGVVLLELLTGR 159
+ V+ T Y APE + + + + D++S G + E++T R
Sbjct: 160 THEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 18/162 (11%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQ--PGPVLSWQQ 58
++ L H N V+LL L +EF LH L P P++
Sbjct: 55 LLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK--- 106
Query: 59 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLH 118
+GL + H ++HRD+K N+LI + K+ADF L+ +A + R +
Sbjct: 107 --SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTY 160
Query: 119 STRVLGTFGYHAPEYAMTGQLNAKS-DVYSFGVVLLELLTGR 159
+ V+ T Y APE + + + + D++S G + E++T R
Sbjct: 161 THEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 18/162 (11%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQ--PGPVLSWQQ 58
++ L H N V+LL L +EF LH L P P++
Sbjct: 55 LLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK--- 106
Query: 59 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLH 118
+GL + H ++HRD+K N+LI + K+ADF L+ +A + R +
Sbjct: 107 --SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTY 160
Query: 119 STRVLGTFGYHAPEYAMTGQLNAKS-DVYSFGVVLLELLTGR 159
+ V+ T Y APE + + + + D++S G + E++T R
Sbjct: 161 THEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 18/162 (11%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQ--PGPVLSWQQ 58
++ L H N V+LL L +EF LH L P P++
Sbjct: 59 LLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK--- 110
Query: 59 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLH 118
+GL + H ++HRD+K N+LI + K+ADF L+ +A + R +
Sbjct: 111 --SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTY 164
Query: 119 STRVLGTFGYHAPEYAMTGQLNAKS-DVYSFGVVLLELLTGR 159
+ V+ T Y APE + + + + D++S G + E++T R
Sbjct: 165 THEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 18/162 (11%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQ--PGPVLSWQQ 58
++ L H N V+LL L +EF LH L P P++
Sbjct: 54 LLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK--- 105
Query: 59 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLH 118
+GL + H ++HRD+K N+LI + K+ADF L+ +A + R +
Sbjct: 106 --SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTY 159
Query: 119 STRVLGTFGYHAPEYAMTGQLNAKS-DVYSFGVVLLELLTGR 159
+ V+ T Y APE + + + + D++S G + E++T R
Sbjct: 160 THEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 18/162 (11%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQ--PGPVLSWQQ 58
++ L H N V+LL L +EF LH L P P++
Sbjct: 54 LLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK--- 105
Query: 59 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLH 118
+GL + H ++HRD+K N+LI + K+ADF L+ +A + R +
Sbjct: 106 --SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTY 159
Query: 119 STRVLGTFGYHAPEYAMTGQLNAKS-DVYSFGVVLLELLTGR 159
+ V+ T Y APE + + + + D++S G + E++T R
Sbjct: 160 THEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 18/162 (11%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQ--PGPVLSWQQ 58
++ L H N V+LL L +EF LH L P P++
Sbjct: 55 LLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK--- 106
Query: 59 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLH 118
+GL + H ++HRD+K N+LI + K+ADF L+ +A + R +
Sbjct: 107 --SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTY 160
Query: 119 STRVLGTFGYHAPEYAMTGQLNAKS-DVYSFGVVLLELLTGR 159
+ V+ T Y APE + + + + D++S G + E++T R
Sbjct: 161 THEVV-TLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 81/177 (45%), Gaps = 32/177 (18%)
Query: 1 MVSRLKHENFVQLLGYCVDGTS--------RVLAYEFASN---GSLHDILHGRKGVKGAQ 49
++ LKHEN V L+ C S L ++F + G L ++L VK
Sbjct: 70 ILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL-----VKFT- 123
Query: 50 PGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQ 109
LS +RV + GL Y+H I+HRD+K++NVLI D V K+ADF L+
Sbjct: 124 ----LSEIKRVMQML--LNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARA 174
Query: 110 ---APDMAARLHSTRVLGTFGYHAPEYAMTGQ-LNAKSDVYSFGVVLLELLTGRKPV 162
A + + RV+ T Y PE + + D++ G ++ E+ T R P+
Sbjct: 175 FSLAKNSQPNRYXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPI 229
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 18/162 (11%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQ--PGPVLSWQQ 58
++ L H N V+LL L +EF LH L P P++
Sbjct: 55 LLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK--- 106
Query: 59 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLH 118
+GL + H ++HRD+K N+LI + K+ADF L+ +A + R +
Sbjct: 107 --SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTY 160
Query: 119 STRVLGTFGYHAPEYAMTGQLNAKS-DVYSFGVVLLELLTGR 159
+ V+ T Y APE + + + + D++S G + E++T R
Sbjct: 161 THEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 69 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 128
G+++LH IIHRD+K SN+++ D KI DF L+ A T + T Y
Sbjct: 139 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 192
Query: 129 HAPEYAMTGQLNAKSDVYSFGVVLLELLTG 158
APE + D++S G ++ E++ G
Sbjct: 193 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 69 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 128
G+++LH IIHRD+K SN+++ D KI DF L+ A T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA---GTSFMMTPYVVTRYY 191
Query: 129 HAPEYAMTGQLNAKSDVYSFGVVLLELLTG 158
APE + D++S G ++ E++ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 75/167 (44%), Gaps = 28/167 (16%)
Query: 5 LKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDIL--HGRKGVKGAQPGPVLSWQQRVKI 62
L+H N V+ + T + E+AS G L++ + GR A+ +QQ +
Sbjct: 73 LRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEAR----FFFQQLL-- 126
Query: 63 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVA---KIADFDLSNQAPDMAARLHS 119
G+ Y H I HRD+K N L+ D A KI DF S ++ LHS
Sbjct: 127 -----SGVSYCHSM---QICHRDLKLENTLL-DGSPAPRLKICDFGYSK-----SSVLHS 172
Query: 120 --TRVLGTFGYHAPEYAMTGQLNAK-SDVYSFGVVLLELLTGRKPVD 163
+GT Y APE + + + K +DV+S GV L +L G P +
Sbjct: 173 QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFE 219
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 18/162 (11%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQ--PGPVLSWQQ 58
++ L H N V+LL L +EF LH L P P++
Sbjct: 56 LLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK--- 107
Query: 59 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLH 118
+GL + H ++HRD+K N+LI + K+ADF L+ +A + R +
Sbjct: 108 --SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTY 161
Query: 119 STRVLGTFGYHAPEYAMTGQLNAKS-DVYSFGVVLLELLTGR 159
+ V+ T Y APE + + + + D++S G + E++T R
Sbjct: 162 THEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 69 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 128
G+++LH IIHRD+K SN+++ D KI DF L+ A T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 191
Query: 129 HAPEYAMTGQLNAKSDVYSFGVVLLELLTG 158
APE + D++S G ++ E++ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 81/177 (45%), Gaps = 32/177 (18%)
Query: 1 MVSRLKHENFVQLLGYCVDGTS--------RVLAYEFASN---GSLHDILHGRKGVKGAQ 49
++ LKHEN V L+ C S L ++F + G L ++L VK
Sbjct: 70 ILQLLKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVL-----VKFT- 123
Query: 50 PGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQ 109
LS +RV + GL Y+H I+HRD+K++NVLI D V K+ADF L+
Sbjct: 124 ----LSEIKRVMQML--LNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARA 174
Query: 110 ---APDMAARLHSTRVLGTFGYHAPEYAMTGQ-LNAKSDVYSFGVVLLELLTGRKPV 162
A + + RV+ T Y PE + + D++ G ++ E+ T R P+
Sbjct: 175 FSLAKNSQPNRYXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPI 229
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 81/177 (45%), Gaps = 32/177 (18%)
Query: 1 MVSRLKHENFVQLLGYCVDGTS--------RVLAYEFASN---GSLHDILHGRKGVKGAQ 49
++ LKHEN V L+ C S L ++F + G L ++L VK
Sbjct: 69 ILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL-----VKFT- 122
Query: 50 PGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQ 109
LS +RV + GL Y+H I+HRD+K++NVLI D V K+ADF L+
Sbjct: 123 ----LSEIKRVMQML--LNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARA 173
Query: 110 ---APDMAARLHSTRVLGTFGYHAPEYAMTGQ-LNAKSDVYSFGVVLLELLTGRKPV 162
A + + RV+ T Y PE + + D++ G ++ E+ T R P+
Sbjct: 174 FSLAKNSQPNRYXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPI 228
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 69 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 128
G+++LH IIHRD+K SN+++ D KI DF L+ A T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA---GTSFMMTPYVVTRYY 191
Query: 129 HAPEYAMTGQLNAKSDVYSFGVVLLELLTG 158
APE + D++S G ++ E++ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 69 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 128
G+++LH IIHRD+K SN+++ D KI DF L+ A T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 191
Query: 129 HAPEYAMTGQLNAKSDVYSFGVVLLELLTG 158
APE + D++S G ++ E++ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 72/165 (43%), Gaps = 17/165 (10%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVL-AYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQR 59
++S ++ F+ L C R+ EF + G L + H +K + + R
Sbjct: 76 ILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDL--MFHIQKSRRFDE--------AR 125
Query: 60 VKI-AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLH 118
+ A L +LH+K II+RD+K NVL+ + K+ADF + + + +
Sbjct: 126 ARFYAAEIISALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEG--ICNGVT 180
Query: 119 STRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVD 163
+ GT Y APE D ++ GV+L E+L G P +
Sbjct: 181 TATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFE 225
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 55/92 (59%), Gaps = 10/92 (10%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQ--APDMAARLHSTRVLGT 125
+GLEYLH+ I+HRD+K +N+L+ ++ V K+ADF L+ +P+ R + +V+ T
Sbjct: 123 QGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPN---RAYXHQVV-T 175
Query: 126 FGYHAPEYAMTGQL-NAKSDVYSFGVVLLELL 156
Y APE ++ D+++ G +L ELL
Sbjct: 176 RWYRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 4/94 (4%)
Query: 69 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 128
L+YLH ++ ++++RD+K N+++ D KI DF L + A + GT Y
Sbjct: 122 ALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKX--FCGTPEY 177
Query: 129 HAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPV 162
APE D + GVV+ E++ GR P
Sbjct: 178 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 211
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Query: 69 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 128
L+YLH ++ ++++RD+K N+++ D KI DF L + A + GT Y
Sbjct: 121 ALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKX--FCGTPEY 176
Query: 129 HAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
APE D + GVV+ E++ GR P
Sbjct: 177 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Query: 69 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 128
L+YLH ++ ++++RD+K N+++ D KI DF L + A + GT Y
Sbjct: 120 ALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKX--FCGTPEY 175
Query: 129 HAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
APE D + GVV+ E++ GR P
Sbjct: 176 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 208
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 69 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 128
G+++LH IIHRD+K SN+++ D KI DF L+ A T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA---GTSFMMTPYVVTRYY 191
Query: 129 HAPEYAMTGQLNAKSDVYSFGVVLLELLTG 158
APE + D++S G ++ E++ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 69 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 128
G+++LH IIHRD+K SN+++ D KI DF L+ A T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 191
Query: 129 HAPEYAMTGQLNAKSDVYSFGVVLLELLTG 158
APE + D++S G ++ E++ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 76/163 (46%), Gaps = 15/163 (9%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ LKH+N V+L L +EF + L G P V S+ ++
Sbjct: 54 LLKELKHKNIVRLHDVLHSDKKLTLVFEFC-DQDLKKYFDSCNG--DLDPEIVKSFLFQL 110
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
KGL + H + +++HRD+K N+LI + K+A+F L+ +A + R +S
Sbjct: 111 ------LKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLA-RAFGIPVRCYSA 160
Query: 121 RVLGTFGYHAPEYAMTGQLNAKS-DVYSFGVVLLELLTGRKPV 162
V+ T Y P+ +L + S D++S G + EL +P+
Sbjct: 161 EVV-TLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPL 202
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 73/160 (45%), Gaps = 14/160 (8%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ L H N V+LL L +EF S L + + G P P++
Sbjct: 58 LLKELNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKKFMDA-SALTGI-PLPLIK----- 109
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+GL + H ++HRD+K N+LI + K+ADF L+ +A + R +
Sbjct: 110 SYLFQLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLA-RAFGVPVRTYXH 165
Query: 121 RVLGTFGYHAPEYAMTGQLNAKS-DVYSFGVVLLELLTGR 159
V+ T Y APE + + + + D++S G + E++T R
Sbjct: 166 EVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 69 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 128
G+++LH IIHRD+K SN+++ D KI DF L+ A T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPEVVTRYY 191
Query: 129 HAPEYAMTGQLNAKSDVYSFGVVLLELLTG 158
APE + D++S G ++ E++ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 77/174 (44%), Gaps = 15/174 (8%)
Query: 5 LKHENFVQLL-GYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIA 63
LKH + V+LL Y DG + +EF L + VK A G V S
Sbjct: 83 LKHPHIVELLETYSSDGM-LYMVFEFMDGADL-----CFEIVKRADAGFVYSEAVASHYM 136
Query: 64 VGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVA---KIADFDLSNQAPDMAARLHST 120
+ L Y H D +IIHRD+K NVL+ + + K+ DF ++ Q + + +
Sbjct: 137 RQILEALRYCH---DNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGE-SGLVAGG 192
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLV 174
RV GT + APE DV+ GV+L LL+G P T R + ++
Sbjct: 193 RV-GTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGII 245
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 71/162 (43%), Gaps = 18/162 (11%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQ--PGPVLSWQQ 58
++ L H N V+LL L +EF LH L P P++
Sbjct: 57 LLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK--- 108
Query: 59 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLH 118
+GL + H ++HRD+K N+LI + K+ADF L+ +A + R +
Sbjct: 109 --SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTY 162
Query: 119 STRVLGTFGYHAPEYAMTGQLNAKS-DVYSFGVVLLELLTGR 159
V+ T Y APE + + + + D++S G + E++T R
Sbjct: 163 XHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 73/160 (45%), Gaps = 14/160 (8%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ L H N V+LL L +EF S L + + G P P++
Sbjct: 56 LLKELNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKKFMDA-SALTGI-PLPLIK----- 107
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
+GL + H ++HRD+K N+LI + K+ADF L+ +A + R +
Sbjct: 108 SYLFQLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLA-RAFGVPVRTYXH 163
Query: 121 RVLGTFGYHAPEYAMTGQLNAKS-DVYSFGVVLLELLTGR 159
V+ T Y APE + + + + D++S G + E++T R
Sbjct: 164 EVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 69/165 (41%), Gaps = 23/165 (13%)
Query: 7 HENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGA 66
H + + L+ + L ++ G L D L + LS ++ I
Sbjct: 159 HPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVA---------LSEKETRSIMRSL 209
Query: 67 AKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS-NQAPDMAARLHSTRVLGT 125
+ + +LH +I+HRD+K N+L+ D+ +++DF S + P R + GT
Sbjct: 210 LEAVSFLHAN---NIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLR----ELCGT 262
Query: 126 FGYHAPEYAMTGQ------LNAKSDVYSFGVVLLELLTGRKPVDH 164
GY APE + D+++ GV+L LL G P H
Sbjct: 263 PGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWH 307
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 71/162 (43%), Gaps = 18/162 (11%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQ--PGPVLSWQQ 58
++ L H N V+LL L +EF LH L P P++
Sbjct: 57 LLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK--- 108
Query: 59 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLH 118
+GL + H ++HRD+K N+LI + K+ADF L+ +A + R +
Sbjct: 109 --SYLFQLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLA-RAFGVPVRTY 162
Query: 119 STRVLGTFGYHAPEYAMTGQLNAKS-DVYSFGVVLLELLTGR 159
V+ T Y APE + + + + D++S G + E++T R
Sbjct: 163 XHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 71/162 (43%), Gaps = 18/162 (11%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQ--PGPVLSWQQ 58
++ L H N V+LL L +EF LH L P P++
Sbjct: 58 LLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK--- 109
Query: 59 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLH 118
+GL + H ++HRD+K N+LI + K+ADF L+ +A + R +
Sbjct: 110 --SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTY 163
Query: 119 STRVLGTFGYHAPEYAMTGQLNAKS-DVYSFGVVLLELLTGR 159
V+ T Y APE + + + + D++S G + E++T R
Sbjct: 164 XHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 71/162 (43%), Gaps = 18/162 (11%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQ--PGPVLSWQQ 58
++ L H N V+LL L +EF LH L P P++
Sbjct: 57 LLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK--- 108
Query: 59 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLH 118
+GL + H ++HRD+K N+LI + K+ADF L+ +A + R +
Sbjct: 109 --SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTY 162
Query: 119 STRVLGTFGYHAPEYAMTGQLNAKS-DVYSFGVVLLELLTGR 159
V+ T Y APE + + + + D++S G + E++T R
Sbjct: 163 XHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 71/162 (43%), Gaps = 18/162 (11%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQ--PGPVLSWQQ 58
++ L H N V+LL L +EF LH L P P++
Sbjct: 56 LLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK--- 107
Query: 59 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLH 118
+GL + H ++HRD+K N+LI + K+ADF L+ +A + R +
Sbjct: 108 --SYLFQLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLA-RAFGVPVRTY 161
Query: 119 STRVLGTFGYHAPEYAMTGQLNAKS-DVYSFGVVLLELLTGR 159
V+ T Y APE + + + + D++S G + E++T R
Sbjct: 162 XHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 71/162 (43%), Gaps = 18/162 (11%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQ--PGPVLSWQQ 58
++ L H N V+LL L +EF LH L P P++
Sbjct: 55 LLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK--- 106
Query: 59 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLH 118
+GL + H ++HRD+K N+LI + K+ADF L+ +A + R +
Sbjct: 107 --SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTY 160
Query: 119 STRVLGTFGYHAPEYAMTGQLNAKS-DVYSFGVVLLELLTGR 159
V+ T Y APE + + + + D++S G + E++T R
Sbjct: 161 XHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 71/162 (43%), Gaps = 18/162 (11%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQ--PGPVLSWQQ 58
++ L H N V+LL L +EF LH L P P++
Sbjct: 54 LLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK--- 105
Query: 59 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLH 118
+GL + H ++HRD+K N+LI + K+ADF L+ +A + R +
Sbjct: 106 --SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTY 159
Query: 119 STRVLGTFGYHAPEYAMTGQLNAKS-DVYSFGVVLLELLTGR 159
V+ T Y APE + + + + D++S G + E++T R
Sbjct: 160 XHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 71/162 (43%), Gaps = 18/162 (11%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQ--PGPVLSWQQ 58
++ L H N V+LL L +EF LH L P P++
Sbjct: 58 LLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKTFMDASALTGIPLPLIK--- 109
Query: 59 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLH 118
+GL + H ++HRD+K N+LI + K+ADF L+ +A + R +
Sbjct: 110 --SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTY 163
Query: 119 STRVLGTFGYHAPEYAMTGQLNAKS-DVYSFGVVLLELLTGR 159
V+ T Y APE + + + + D++S G + E++T R
Sbjct: 164 XHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 71/162 (43%), Gaps = 18/162 (11%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQ--PGPVLSWQQ 58
++ L H N V+LL L +EF LH L P P++
Sbjct: 58 LLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK--- 109
Query: 59 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLH 118
+GL + H ++HRD+K N+LI + K+ADF L+ +A + R +
Sbjct: 110 --SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTY 163
Query: 119 STRVLGTFGYHAPEYAMTGQLNAKS-DVYSFGVVLLELLTGR 159
V+ T Y APE + + + + D++S G + E++T R
Sbjct: 164 XHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 71/162 (43%), Gaps = 18/162 (11%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQ--PGPVLSWQQ 58
++ L H N V+LL L +EF LH L P P++
Sbjct: 55 LLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK--- 106
Query: 59 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLH 118
+GL + H ++HRD+K N+LI + K+ADF L+ +A + R +
Sbjct: 107 --SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTY 160
Query: 119 STRVLGTFGYHAPEYAMTGQLNAKS-DVYSFGVVLLELLTGR 159
V+ T Y APE + + + + D++S G + E++T R
Sbjct: 161 XHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 71/162 (43%), Gaps = 18/162 (11%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQ--PGPVLSWQQ 58
++ L H N V+LL L +EF LH L P P++
Sbjct: 59 LLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK--- 110
Query: 59 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLH 118
+GL + H ++HRD+K N+LI + K+ADF L+ +A + R +
Sbjct: 111 --SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTY 164
Query: 119 STRVLGTFGYHAPEYAMTGQLNAKS-DVYSFGVVLLELLTGR 159
V+ T Y APE + + + + D++S G + E++T R
Sbjct: 165 XHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 71/162 (43%), Gaps = 18/162 (11%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQ--PGPVLSWQQ 58
++ L H N V+LL L +EF LH L P P++
Sbjct: 54 LLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK--- 105
Query: 59 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLH 118
+GL + H ++HRD+K N+LI + K+ADF L+ +A + R +
Sbjct: 106 --SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTY 159
Query: 119 STRVLGTFGYHAPEYAMTGQLNAKS-DVYSFGVVLLELLTGR 159
V+ T Y APE + + + + D++S G + E++T R
Sbjct: 160 XHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 71/162 (43%), Gaps = 18/162 (11%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQ--PGPVLSWQQ 58
++ L H N V+LL L +EF LH L P P++
Sbjct: 55 LLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK--- 106
Query: 59 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLH 118
+GL + H ++HRD+K N+LI + K+ADF L+ +A + R +
Sbjct: 107 --SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTY 160
Query: 119 STRVLGTFGYHAPEYAMTGQLNAKS-DVYSFGVVLLELLTGR 159
V+ T Y APE + + + + D++S G + E++T R
Sbjct: 161 XHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 71/162 (43%), Gaps = 18/162 (11%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQ--PGPVLSWQQ 58
++ L H N V+LL L +EF LH L P P++
Sbjct: 56 LLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK--- 107
Query: 59 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLH 118
+GL + H ++HRD+K N+LI + K+ADF L+ +A + R +
Sbjct: 108 --SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTY 161
Query: 119 STRVLGTFGYHAPEYAMTGQLNAKS-DVYSFGVVLLELLTGR 159
V+ T Y APE + + + + D++S G + E++T R
Sbjct: 162 XHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 71/162 (43%), Gaps = 18/162 (11%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQ--PGPVLSWQQ 58
++ L H N V+LL L +EF LH L P P++
Sbjct: 55 LLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK--- 106
Query: 59 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLH 118
+GL + H ++HRD+K N+LI + K+ADF L+ +A + R +
Sbjct: 107 --SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTY 160
Query: 119 STRVLGTFGYHAPEYAMTGQLNAKS-DVYSFGVVLLELLTGR 159
V+ T Y APE + + + + D++S G + E++T R
Sbjct: 161 XHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 73/168 (43%), Gaps = 25/168 (14%)
Query: 7 HENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGA 66
++N ++L+ + D T L +E GS+ + +K + ++ ++
Sbjct: 70 NKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKH---------FNEREASRVVRDV 120
Query: 67 AKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVA---KIADFDLS-----NQAPDMAARLH 118
A L++LH K I HRD+K N+L + KI DFDL N +
Sbjct: 121 AAALDFLHTKG---IAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPE 177
Query: 119 STRVLGTFGYHAPEYA--MTGQ---LNAKSDVYSFGVVLLELLTGRKP 161
T G+ Y APE T Q + + D++S GVVL +L+G P
Sbjct: 178 LTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPP 225
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 71/162 (43%), Gaps = 18/162 (11%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQ--PGPVLSWQQ 58
++ L H N V+LL L +EF LH L P P++
Sbjct: 56 LLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK--- 107
Query: 59 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLH 118
+GL + H ++HRD+K N+LI + K+ADF L+ +A + R +
Sbjct: 108 --SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTY 161
Query: 119 STRVLGTFGYHAPEYAMTGQLNAKS-DVYSFGVVLLELLTGR 159
V+ T Y APE + + + + D++S G + E++T R
Sbjct: 162 XHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 74/164 (45%), Gaps = 18/164 (10%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++++L H + L D VL EF S G L D + A +S + +
Sbjct: 101 IMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRI--------AAEDYKMSEAEVI 152
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVA--KIADFDLSNQ-APDMAARL 117
A +GL+++HE + I+H DIK N++ + KI DF L+ + PD ++
Sbjct: 153 NYMRQACEGLKHMHEHS---IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKV 209
Query: 118 HSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
+ T + APE + +D+++ GV+ LL+G P
Sbjct: 210 TT----ATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSP 249
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 61/132 (46%), Gaps = 15/132 (11%)
Query: 32 NGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNV 91
LH I+H +QP L+ + +GL+Y+H +IHRD+K SN+
Sbjct: 143 ESDLHQIIHS------SQP---LTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNL 190
Query: 92 LIFDDDVAKIADFDLSNQAPDMAA--RLHSTRVLGTFGYHAPEYAMT-GQLNAKSDVYSF 148
L+ ++ KI DF ++ A + T + T Y APE ++ + D++S
Sbjct: 191 LVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSV 250
Query: 149 GVVLLELLTGRK 160
G + E+L R+
Sbjct: 251 GCIFGEMLARRQ 262
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 74/167 (44%), Gaps = 28/167 (16%)
Query: 5 LKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDIL--HGRKGVKGAQPGPVLSWQQRVKI 62
L+H N V+ + T + E+AS G L + + GR A+ +QQ +
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEAR----FFFQQLI-- 125
Query: 63 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVA---KIADFDLSNQAPDMAARLHS 119
G+ Y H + HRD+K N L+ D A KI DF S ++ LHS
Sbjct: 126 -----SGVSYCHAM---QVCHRDLKLENTLL-DGSPAPRLKICDFGYSK-----SSVLHS 171
Query: 120 --TRVLGTFGYHAPEYAMTGQLNAK-SDVYSFGVVLLELLTGRKPVD 163
+GT Y APE + + + K +DV+S GV L +L G P +
Sbjct: 172 QPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFE 218
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 6/90 (6%)
Query: 69 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 128
G+++LH IIHRD+K SN+++ D KI DF L+ A + T Y
Sbjct: 140 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMVPFVVTRYY 193
Query: 129 HAPEYAMTGQLNAKSDVYSFGVVLLELLTG 158
APE + D++S G ++ E++ G
Sbjct: 194 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 74/167 (44%), Gaps = 28/167 (16%)
Query: 5 LKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDIL--HGRKGVKGAQPGPVLSWQQRVKI 62
L+H N V+ + T + E+AS G L + + GR A+ +QQ +
Sbjct: 71 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEAR----FFFQQLI-- 124
Query: 63 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVA---KIADFDLSNQAPDMAARLHS 119
G+ Y H + HRD+K N L+ D A KI DF S ++ LHS
Sbjct: 125 -----SGVSYCHAM---QVCHRDLKLENTLL-DGSPAPRLKICDFGYSK-----SSVLHS 170
Query: 120 --TRVLGTFGYHAPEYAMTGQLNAK-SDVYSFGVVLLELLTGRKPVD 163
+GT Y APE + + + K +DV+S GV L +L G P +
Sbjct: 171 QPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFE 217
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 61/132 (46%), Gaps = 15/132 (11%)
Query: 32 NGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNV 91
LH I+H +QP L+ + +GL+Y+H +IHRD+K SN+
Sbjct: 142 ESDLHQIIHS------SQP---LTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNL 189
Query: 92 LIFDDDVAKIADFDLSNQAPDMAA--RLHSTRVLGTFGYHAPEYAMT-GQLNAKSDVYSF 148
L+ ++ KI DF ++ A + T + T Y APE ++ + D++S
Sbjct: 190 LVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSV 249
Query: 149 GVVLLELLTGRK 160
G + E+L R+
Sbjct: 250 GCIFGEMLARRQ 261
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 69/169 (40%), Gaps = 34/169 (20%)
Query: 5 LKHENFVQLLGYCVDGTSR--VLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKI 62
H N + +LG C + L + GSL+++LH V+ Q VK
Sbjct: 64 FSHPNVLPVLGACQSPPAPHPTLITHWXPYGSLYNVLHEGTNF-------VVDQSQAVKF 116
Query: 63 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKI--ADFDLSNQAPDMAARLHST 120
A+ A+G +LH +P I + S +V I +D A+I AD S Q+P
Sbjct: 117 ALDXARGXAFLH-TLEPLIPRHALNSRSVXIDEDXTARISXADVKFSFQSPGRX------ 169
Query: 121 RVLGTFGYHAPEYAMTGQLNAK--------SDVYSFGVVLLELLTGRKP 161
+AP + L K +D +SF V+L EL+T P
Sbjct: 170 --------YAPAWVAPEALQKKPEDTNRRSADXWSFAVLLWELVTREVP 210
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 52/93 (55%), Gaps = 6/93 (6%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 127
+GL + H ++HRD+K N+LI + K+ADF L+ +A + R ++ V+ T
Sbjct: 113 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEVV-TLW 167
Query: 128 YHAPEYAMTGQLNAKS-DVYSFGVVLLELLTGR 159
Y APE + + + + D++S G + E++T R
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 53/109 (48%), Gaps = 10/109 (9%)
Query: 57 QQRVKIAVGA-AKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAA 115
++ VK+ + L+YL + IIHRD+K N+L+ + I DF+++ P
Sbjct: 114 EETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLP---R 167
Query: 116 RLHSTRVLGTFGYHAPEYAMTGQLNAKS---DVYSFGVVLLELLTGRKP 161
T + GT Y APE + + S D +S GV ELL GR+P
Sbjct: 168 ETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRP 216
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 12/102 (11%)
Query: 69 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 128
G+++LH IIHRD+K SN+++ D KI DF L+ A T + T Y
Sbjct: 131 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTA---GTSFMMTPYVVTRYY 184
Query: 129 HAPEYAMTGQLNAKSDVYSFGVVLLE------LLTGRKPVDH 164
APE + D++S G ++ E L GR +D
Sbjct: 185 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 226
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 72/164 (43%), Gaps = 18/164 (10%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
+ +L+H N V+L + + L ++ + G L + + R+ A + QQ +
Sbjct: 58 ICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCI--QQIL 115
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDD---VAKIADFDLSNQAPDMAARL 117
+ + Y H I+HR++K N+L+ K+ADF L+ + D A
Sbjct: 116 E-------SIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA-W 164
Query: 118 HSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
H GT GY +PE + D+++ GV+L LL G P
Sbjct: 165 HG--FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 72/164 (43%), Gaps = 18/164 (10%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
+ +L+H N V+L + + L ++ + G L + + R+ A + QQ +
Sbjct: 58 ICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCI--QQIL 115
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDD---VAKIADFDLSNQAPDMAARL 117
+ + Y H I+HR++K N+L+ K+ADF L+ + D A
Sbjct: 116 E-------SIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA-W 164
Query: 118 HSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
H GT GY +PE + D+++ GV+L LL G P
Sbjct: 165 HG--FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 12/102 (11%)
Query: 69 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 128
G+++LH IIHRD+K SN+++ D KI DF L+ A T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTA---GTSFMMTPYVVTRYY 191
Query: 129 HAPEYAMTGQLNAKSDVYSFGVVLLE------LLTGRKPVDH 164
APE + D++S G ++ E L GR +D
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 233
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 72/164 (43%), Gaps = 18/164 (10%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
+ +L+H N V+L + + L ++ + G L + + R+ A + QQ +
Sbjct: 57 ICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCI--QQIL 114
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDD---VAKIADFDLSNQAPDMAARL 117
+ + Y H I+HR++K N+L+ K+ADF L+ + D A
Sbjct: 115 E-------SIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA-W 163
Query: 118 HSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
H GT GY +PE + D+++ GV+L LL G P
Sbjct: 164 HG--FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 205
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 12/102 (11%)
Query: 69 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 128
G+++LH IIHRD+K SN+++ D KI DF L+ A T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTA---GTSFMMTPYVVTRYY 191
Query: 129 HAPEYAMTGQLNAKSDVYSFGVVLLE------LLTGRKPVDH 164
APE + D++S G ++ E L GR +D
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 233
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 12/102 (11%)
Query: 69 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 128
G+++LH IIHRD+K SN+++ D KI DF L+ A T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTA---GTSFMMTPYVVTRYY 191
Query: 129 HAPEYAMTGQLNAKSDVYSFGVVLLE------LLTGRKPVDH 164
APE + D++S G ++ E L GR +D
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 233
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 12/102 (11%)
Query: 69 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 128
G+++LH IIHRD+K SN+++ D KI DF L+ A T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTA---GTSFMMTPYVVTRYY 191
Query: 129 HAPEYAMTGQLNAKSDVYSFGVVLLE------LLTGRKPVDH 164
APE + D++S G ++ E L GR +D
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 233
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 66/164 (40%), Gaps = 18/164 (10%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ ++KHEN V L L + S G L D + KG + L Q
Sbjct: 73 VLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRI-VEKGFYTEKDASTLIRQ--- 128
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAK---IADFDLSNQAPDMAARL 117
+ YLH I+HRD+K N+L + D I+DF LS + +
Sbjct: 129 -----VLDAVYYLHRMG---IVHRDLKPENLLYYSQDEESKIMISDFGLSKM--EGKGDV 178
Query: 118 HSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
ST GT GY APE + D +S GV+ LL G P
Sbjct: 179 MST-ACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 221
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 12/102 (11%)
Query: 69 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 128
G+++LH IIHRD+K SN+++ D KI DF L+ A T + T Y
Sbjct: 176 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 229
Query: 129 HAPEYAMTGQLNAKSDVYSFGVVLLE------LLTGRKPVDH 164
APE + D++S G ++ E L GR +D
Sbjct: 230 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 271
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 12/102 (11%)
Query: 69 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 128
G+++LH IIHRD+K SN+++ D KI DF L+ A T + T Y
Sbjct: 139 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 192
Query: 129 HAPEYAMTGQLNAKSDVYSFGVVLLE------LLTGRKPVDH 164
APE + D++S G ++ E L GR +D
Sbjct: 193 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 234
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 12/102 (11%)
Query: 69 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 128
G+++LH IIHRD+K SN+++ D KI DF L+ A T + T Y
Sbjct: 139 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 192
Query: 129 HAPEYAMTGQLNAKSDVYSFGVVLLE------LLTGRKPVDH 164
APE + D++S G ++ E L GR +D
Sbjct: 193 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 234
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 12/102 (11%)
Query: 69 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 128
G+++LH IIHRD+K SN+++ D KI DF L+ A T + T Y
Sbjct: 132 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 185
Query: 129 HAPEYAMTGQLNAKSDVYSFGVVLLE------LLTGRKPVDH 164
APE + D++S G ++ E L GR +D
Sbjct: 186 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 227
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 12/102 (11%)
Query: 69 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 128
G+++LH IIHRD+K SN+++ D KI DF L+ A T + T Y
Sbjct: 176 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 229
Query: 129 HAPEYAMTGQLNAKSDVYSFGVVLLE------LLTGRKPVDH 164
APE + D++S G ++ E L GR +D
Sbjct: 230 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 271
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 12/102 (11%)
Query: 69 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 128
G+++LH IIHRD+K SN+++ D KI DF L+ A T + T Y
Sbjct: 131 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 184
Query: 129 HAPEYAMTGQLNAKSDVYSFGVVLLE------LLTGRKPVDH 164
APE + D++S G ++ E L GR +D
Sbjct: 185 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 226
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 12/102 (11%)
Query: 69 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 128
G+++LH IIHRD+K SN+++ D KI DF L+ A T + T Y
Sbjct: 132 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 185
Query: 129 HAPEYAMTGQLNAKSDVYSFGVVLLE------LLTGRKPVDH 164
APE + D++S G ++ E L GR +D
Sbjct: 186 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 227
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 12/102 (11%)
Query: 69 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 128
G+++LH IIHRD+K SN+++ D KI DF L+ A T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 191
Query: 129 HAPEYAMTGQLNAKSDVYSFGVVLLE------LLTGRKPVDH 164
APE + D++S G ++ E L GR +D
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 233
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 12/102 (11%)
Query: 69 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 128
G+++LH IIHRD+K SN+++ D KI DF L+ A T + T Y
Sbjct: 137 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 190
Query: 129 HAPEYAMTGQLNAKSDVYSFGVVLLE------LLTGRKPVDH 164
APE + D++S G ++ E L GR +D
Sbjct: 191 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 232
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 12/102 (11%)
Query: 69 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 128
G+++LH IIHRD+K SN+++ D KI DF L+ A T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 191
Query: 129 HAPEYAMTGQLNAKSDVYSFGVVLLE------LLTGRKPVDH 164
APE + D++S G ++ E L GR +D
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 233
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 51/93 (54%), Gaps = 6/93 (6%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 127
+GL + H ++HRD+K N+LI + K+ADF L+ +A + R + V+ T
Sbjct: 117 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVV-TLW 171
Query: 128 YHAPEYAMTGQLNAKS-DVYSFGVVLLELLTGR 159
Y APE + + + + D++S G + E++T R
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 63/140 (45%), Gaps = 19/140 (13%)
Query: 34 SLHDILHGRKGVKGA-------------QPGPVLSWQQRVKIAVGAAKGLEYLHEKADPH 80
+LHDI+H K + G +++ +GL Y H +
Sbjct: 64 TLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQK--- 120
Query: 81 IIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAM-TGQL 139
++HRD+K N+LI + K+ADF L+ +A + + + V+ T Y P+ + +
Sbjct: 121 VLHRDLKPQNLLINERGELKLADFGLA-RAKSIPTKTYDNEVV-TLWYRPPDILLGSTDY 178
Query: 140 NAKSDVYSFGVVLLELLTGR 159
+ + D++ G + E+ TGR
Sbjct: 179 STQIDMWGVGCIFYEMATGR 198
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 72/164 (43%), Gaps = 18/164 (10%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
+ +L+H N V+L + + L ++ + G L + + R+ A + QQ +
Sbjct: 81 ICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCI--QQIL 138
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDD---VAKIADFDLSNQAPDMAARL 117
+ + Y H I+HR++K N+L+ K+ADF L+ + D A
Sbjct: 139 E-------SIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA-W 187
Query: 118 HSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
H GT GY +PE + D+++ GV+L LL G P
Sbjct: 188 HG--FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 229
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 69 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 128
G+++LH IIHRD+K SN+++ D KI DF L+ A T + T Y
Sbjct: 143 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 196
Query: 129 HAPEYAMTGQLNAKSDVYSFGVVLLELLTGR 159
APE + D++S G ++ E++ +
Sbjct: 197 RAPEVILGMGYKENVDLWSVGCIMGEMVCHK 227
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 78/182 (42%), Gaps = 33/182 (18%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSR--VLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQ 58
++ LKH N + L + R L +++A + H I R +P
Sbjct: 71 LLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKP-------- 122
Query: 59 RVKIAVGAAK--------GLEYLHEKADPHIIHRDIKSSNVLIF----DDDVAKIADF-- 104
V++ G K G+ YLH ++HRD+K +N+L+ + KIAD
Sbjct: 123 -VQLPRGMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGF 178
Query: 105 -DLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKS-DVYSFGVVLLELLTGRKPV 162
L N A L V+ TF Y APE + + K+ D+++ G + ELLT +P+
Sbjct: 179 ARLFNSPLKPLADLDP--VVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTS-EPI 235
Query: 163 DH 164
H
Sbjct: 236 FH 237
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 70/167 (41%), Gaps = 15/167 (8%)
Query: 1 MVSRLKHENFVQLLG--YCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQ 58
++ RL+H+N +QL+ Y + + E+ G + ++L + P Q
Sbjct: 59 LLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLD-------SVPEKRFPVCQ 110
Query: 59 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLH 118
GLEYLH + I+H+DIK N+L+ KI+ ++ AA
Sbjct: 111 AHGYFCQLIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDT 167
Query: 119 STRVLGTFGYHAPEYA--MTGQLNAKSDVYSFGVVLLELLTGRKPVD 163
G+ + PE A + K D++S GV L + TG P +
Sbjct: 168 CRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFE 214
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 69 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 128
G+++LH IIHRD+K SN+++ D KI DF L+ A T + T Y
Sbjct: 132 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 185
Query: 129 HAPEYAMTGQLNAKSDVYSFGVVLLELLTGR 159
APE + D++S G ++ E++ +
Sbjct: 186 RAPEVILGMGYKENVDLWSVGCIMGEMVCHK 216
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 75/164 (45%), Gaps = 18/164 (10%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++++L H N +QL VL E+ G L D + + + +L +Q
Sbjct: 139 VMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIID-ESYNLTELDTILFMKQ-- 195
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVA--KIADFDLSNQ-APDMAARL 117
+G+ ++H+ +I+H D+K N+L + D KI DF L+ + P ++
Sbjct: 196 -----ICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKV 247
Query: 118 HSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
+ GT + APE ++ +D++S GV+ LL+G P
Sbjct: 248 N----FGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSP 287
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 71/164 (43%), Gaps = 28/164 (17%)
Query: 6 KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVG 65
+HEN V +G C+ + +L+ ++ K VL + +IA
Sbjct: 87 RHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAK--------IVLDVNKTRQIAQE 138
Query: 66 AAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAA--RLHSTRVL 123
KG+ YLH K I+H+D+KS NV +D+ I DF L + + + A R R+
Sbjct: 139 IVKGMGYLHAKG---ILHKDLKSKNVF-YDNGKVVITDFGLFSISGVLQAGRREDKLRIQ 194
Query: 124 GTFGYH-APEYAMTGQL-----------NAKSDVYSFGVVLLEL 155
+ H APE + QL + SDV++ G + EL
Sbjct: 195 NGWLCHLAPE--IIRQLSPDTEEDKLPFSKHSDVFALGTIWYEL 236
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 70 LEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYH 129
EYLH +I+RD+K N+LI K+ADF + + + + + GT Y
Sbjct: 155 FEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKR-----VKGRTWXLCGTPEYL 206
Query: 130 APEYAMTGQLNAKSDVYSFGVVLLELLTGRKPV 162
APE ++ N D ++ GV++ E+ G P
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 10/92 (10%)
Query: 80 HIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAA--------RLHSTRVLGTFGYHAP 131
++IHRD+K SN+LI + K+ DF L+ + AA + T + T Y AP
Sbjct: 132 NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAP 191
Query: 132 EYAMTGQLNAKS-DVYSFGVVLLELLTGRKPV 162
E +T +++ DV+S G +L EL R+P+
Sbjct: 192 EVMLTSAKYSRAMDVWSCGCILAELFL-RRPI 222
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 8/92 (8%)
Query: 70 LEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYH 129
EYLH +I+RD+K N+LI K+ADF + + + + + GT Y
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKR-----VKGRTWXLCGTPEYL 205
Query: 130 APEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
APE ++ N D ++ GV++ E+ G P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 10/92 (10%)
Query: 80 HIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAA--------RLHSTRVLGTFGYHAP 131
++IHRD+K SN+LI + K+ DF L+ + AA + T + T Y AP
Sbjct: 132 NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAP 191
Query: 132 EYAMTGQLNAKS-DVYSFGVVLLELLTGRKPV 162
E +T +++ DV+S G +L EL R+P+
Sbjct: 192 EVMLTSAKYSRAMDVWSCGCILAELFL-RRPI 222
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 70 LEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYH 129
EYLH +I+RD+K N+LI K+ADF + + + + + GT Y
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKR-----VKGRTWXLCGTPEYL 205
Query: 130 APEYAMTGQLNAKSDVYSFGVVLLELLTGRKPV 162
APE ++ N D ++ GV++ E+ G P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 70 LEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYH 129
EYLH +I+RD+K N+LI K+ADF + + + + + GT Y
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKR-----VKGRTWXLCGTPEYL 205
Query: 130 APEYAMTGQLNAKSDVYSFGVVLLELLTGRKPV 162
APE ++ N D ++ GV++ E+ G P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 68/158 (43%), Gaps = 17/158 (10%)
Query: 7 HENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGA 66
H N V+L D L E + G L + + +K + ++ +++ AV
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIM---RKLVSAVS- 120
Query: 67 AKGLEYLHEKADPHIIHRDIKSSNVLIFDDD---VAKIADFDLSNQAPDMAARLHSTRVL 123
++H D ++HRD+K N+L D++ KI DF + P L +
Sbjct: 121 -----HMH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCF- 171
Query: 124 GTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
T Y APE + D++S GV+L +L+G+ P
Sbjct: 172 -TLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVP 208
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 73/167 (43%), Gaps = 28/167 (16%)
Query: 5 LKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDIL--HGRKGVKGAQPGPVLSWQQRVKI 62
L+H N V+ + T + E+AS G L + + GR A+ +QQ +
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEAR----FFFQQLI-- 125
Query: 63 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVA---KIADFDLSNQAPDMAARLHS 119
G+ Y H + HRD+K N L+ D A KI F S ++ LHS
Sbjct: 126 -----SGVSYCHAM---QVCHRDLKLENTLL-DGSPAPRLKICAFGYSK-----SSVLHS 171
Query: 120 --TRVLGTFGYHAPEYAMTGQLNAK-SDVYSFGVVLLELLTGRKPVD 163
+GT Y APE + + + K +DV+S GV L +L G P +
Sbjct: 172 QPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFE 218
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
Query: 69 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 128
G+++LH IIHRD+K SN+++ D KI DF L+ A + + V+ + Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG--TSFMMEPEVVTRY-Y 191
Query: 129 HAPEYAMTGQLNAKSDVYSFGVVLLELLTGR 159
APE + D++S G ++ E++ +
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVCHK 222
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 73/167 (43%), Gaps = 28/167 (16%)
Query: 5 LKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDIL--HGRKGVKGAQPGPVLSWQQRVKI 62
L+H N V+ + T + E+AS G L + + GR A+ +QQ +
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEAR----FFFQQLI-- 125
Query: 63 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVA---KIADFDLSNQAPDMAARLHS 119
G+ Y H + HRD+K N L+ D A KI F S ++ LHS
Sbjct: 126 -----SGVSYCHAM---QVCHRDLKLENTLL-DGSPAPRLKICAFGYSK-----SSVLHS 171
Query: 120 --TRVLGTFGYHAPEYAMTGQLNAK-SDVYSFGVVLLELLTGRKPVD 163
+GT Y APE + + + K +DV+S GV L +L G P +
Sbjct: 172 QPKDTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFE 218
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 8/92 (8%)
Query: 70 LEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYH 129
EYLH +I+RD+K N++I K+ DF L+ + + + + GT Y
Sbjct: 154 FEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGLAKR-----VKGRTWXLCGTPEYL 205
Query: 130 APEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
APE ++ N D ++ GV++ E+ G P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 80 HIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEY--AM-- 135
H +HRDIK NVL+ + ++ADF + D + S+ +GT Y +PE AM
Sbjct: 211 HYVHRDIKPDNVLLDVNGHIRLADFGSCLKMND-DGTVQSSVAVGTPDYISPEILQAMED 269
Query: 136 -TGQLNAKSDVYSFGVVLLELLTGRKP 161
G+ + D +S GV + E+L G P
Sbjct: 270 GMGKYGPECDWWSLGVCMYEMLYGETP 296
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 5/85 (5%)
Query: 81 IIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMT---- 136
+IHRD+K N+L+ K+ADF + D +H +GT Y +PE +
Sbjct: 195 LIHRDVKPDNMLLDKHGHLKLADFGTCMKM-DETGMVHCDTAVGTPDYISPEVLKSQGGD 253
Query: 137 GQLNAKSDVYSFGVVLLELLTGRKP 161
G + D +S GV L E+L G P
Sbjct: 254 GYYGRECDWWSVGVFLFEMLVGDTP 278
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
Query: 69 GLEYLHEKADPHIIHRDIKSSNVL--IFD--DDVAKIADFDLSNQAPDMAARLHSTRVLG 124
GL+Y+H + IIH DIK NVL I D +++ +I DL N H T +
Sbjct: 143 GLDYMHRRCG--IIHTDIKPENVLMEIVDSPENLIQIKIADLGNAC---WYDEHYTNSIQ 197
Query: 125 TFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTG 158
T Y +PE + +D++S ++ EL+TG
Sbjct: 198 TREYRSPEVLLGAPWGCGADIWSTACLIFELITG 231
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 80 HIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEY--AM-- 135
H +HRDIK NVL+ + ++ADF + D + S+ +GT Y +PE AM
Sbjct: 195 HYVHRDIKPDNVLLDVNGHIRLADFGSCLKMND-DGTVQSSVAVGTPDYISPEILQAMED 253
Query: 136 -TGQLNAKSDVYSFGVVLLELLTGRKP 161
G+ + D +S GV + E+L G P
Sbjct: 254 GMGKYGPECDWWSLGVCMYEMLYGETP 280
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
Query: 69 GLEYLHEKADPHIIHRDIKSSNVL--IFD--DDVAKIADFDLSNQAPDMAARLHSTRVLG 124
GL+Y+H + IIH DIK NVL I D +++ +I DL N H T +
Sbjct: 143 GLDYMHRRCG--IIHTDIKPENVLMEIVDSPENLIQIKIADLGNAC---WYDEHYTNSIQ 197
Query: 125 TFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTG 158
T Y +PE + +D++S ++ EL+TG
Sbjct: 198 TREYRSPEVLLGAPWGCGADIWSTACLIFELITG 231
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 10/92 (10%)
Query: 80 HIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAA--------RLHSTRVLGTFGYHAP 131
++IHRD+K SN+LI + K+ DF L+ + AA + + T Y AP
Sbjct: 132 NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAP 191
Query: 132 EYAMTGQLNAKS-DVYSFGVVLLELLTGRKPV 162
E +T +++ DV+S G +L EL R+P+
Sbjct: 192 EVMLTSAKYSRAMDVWSCGCILAELFL-RRPI 222
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 16/110 (14%)
Query: 70 LEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQA-PDMAARLHSTRVLGTFGY 128
LE +H I+H D+K +N LI D + K+ DF ++NQ PD + + ++V GT Y
Sbjct: 121 LEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQV-GTVNY 178
Query: 129 HAPEYAMTGQLNAKS------------DVYSFGVVLLELLTGRKPVDHTL 166
PE A+ +++ DV+S G +L + G+ P +
Sbjct: 179 MPPE-AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII 227
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 72/163 (44%), Gaps = 16/163 (9%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSL-HDILHGRKGVKGAQPGPVLSWQQR 59
++ L H + V+L+G + + ++ E G L H + + +K VL+
Sbjct: 62 IMKNLDHPHIVKLIGIIEEEPTWIIM-ELYPYGELGHYLERNKNSLK------VLT---L 111
Query: 60 VKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHS 119
V ++ K + YL + +HRDI N+L+ + K+ DF LS D S
Sbjct: 112 VLYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKAS 168
Query: 120 TRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
L + +PE + SDV+ F V + E+L+ G++P
Sbjct: 169 VTRL-PIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQP 210
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 67/162 (41%), Gaps = 14/162 (8%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ L H + V+L+G + + ++ E G L L K L V
Sbjct: 78 IMKNLDHPHIVKLIGIIEEEPTWIIM-ELYPYGELGHYLERNKNS--------LKVLTLV 128
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
++ K + YL + +HRDI N+L+ + K+ DF LS D S
Sbjct: 129 LYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASV 185
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
L + +PE + SDV+ F V + E+L+ G++P
Sbjct: 186 TRL-PIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQP 226
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 16/110 (14%)
Query: 70 LEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQA-PDMAARLHSTRVLGTFGY 128
LE +H I+H D+K +N LI D + K+ DF ++NQ PD + + ++V GT Y
Sbjct: 117 LEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQV-GTVNY 174
Query: 129 HAPEYAMTGQLNAKS------------DVYSFGVVLLELLTGRKPVDHTL 166
PE A+ +++ DV+S G +L + G+ P +
Sbjct: 175 MPPE-AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII 223
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 67/162 (41%), Gaps = 14/162 (8%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 60
++ L H + V+L+G + + ++ E G L L K L V
Sbjct: 66 IMKNLDHPHIVKLIGIIEEEPTWIIM-ELYPYGELGHYLERNKNS--------LKVLTLV 116
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
++ K + YL + +HRDI N+L+ + K+ DF LS D S
Sbjct: 117 LYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASV 173
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLT-GRKP 161
L + +PE + SDV+ F V + E+L+ G++P
Sbjct: 174 TRL-PIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQP 214
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
Query: 69 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 128
G+++LH IIHRD+K SN+++ D KI DF L+ A + + V+ + Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG--TSFMMEPEVVTRY-Y 191
Query: 129 HAPEYAMTGQLNAKSDVYSFGVVLLELLTGR 159
APE + D++S G ++ E++ +
Sbjct: 192 RAPEVILGMGYKENVDLWSVGCIMGEMVCHK 222
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 16/110 (14%)
Query: 70 LEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQA-PDMAARLHSTRVLGTFGY 128
LE +H I+H D+K +N LI D + K+ DF ++NQ PD + + ++V GT Y
Sbjct: 118 LEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQV-GTVNY 175
Query: 129 HAPEYAMTGQLNAKS------------DVYSFGVVLLELLTGRKPVDHTL 166
PE A+ +++ DV+S G +L + G+ P +
Sbjct: 176 MPPE-AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII 224
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 69/165 (41%), Gaps = 21/165 (12%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHD-ILHGRKGVKGAQPGPVLSWQQR 59
++ L H N ++L D T L E + G L + ++H R V
Sbjct: 59 IMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKR----------VFRESDA 108
Query: 60 VKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFD---DDVAKIADFDLSNQAPDMAAR 116
+I + Y H+ ++ HRD+K N L D K+ DF L+ A +
Sbjct: 109 ARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLA--ARFKPGK 163
Query: 117 LHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
+ T+V GT Y +P+ + G + D +S GV++ LL G P
Sbjct: 164 MMRTKV-GTPYYVSPQ-VLEGLYGPECDEWSAGVMMYVLLCGYPP 206
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 69/165 (41%), Gaps = 21/165 (12%)
Query: 1 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHD-ILHGRKGVKGAQPGPVLSWQQR 59
++ L H N ++L D T L E + G L + ++H R V
Sbjct: 76 IMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKR----------VFRESDA 125
Query: 60 VKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFD---DDVAKIADFDLSNQAPDMAAR 116
+I + Y H+ ++ HRD+K N L D K+ DF L+ A +
Sbjct: 126 ARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLA--ARFKPGK 180
Query: 117 LHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
+ T+V GT Y +P+ + G + D +S GV++ LL G P
Sbjct: 181 MMRTKV-GTPYYVSPQ-VLEGLYGPECDEWSAGVMMYVLLCGYPP 223
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 16/110 (14%)
Query: 70 LEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQA-PDMAARLHSTRVLGTFGY 128
LE +H I+H D+K +N LI D + K+ DF ++NQ PD + + ++V GT Y
Sbjct: 137 LEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQV-GTVNY 194
Query: 129 HAPEYAMTGQLNAKS------------DVYSFGVVLLELLTGRKPVDHTL 166
PE A+ +++ DV+S G +L + G+ P +
Sbjct: 195 MPPE-AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII 243
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 8/93 (8%)
Query: 70 LEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYH 129
EYLH +I+RD+K N++I K+ DF + + + + + GT Y
Sbjct: 155 FEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV-----KGRTWXLCGTPEYL 206
Query: 130 APEYAMTGQLNAKSDVYSFGVVLLELLTGRKPV 162
APE ++ N D ++ GV++ E+ G P
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 8/93 (8%)
Query: 70 LEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYH 129
EYLH +I+RD+K N++I K+ DF + + + + + GT Y
Sbjct: 155 FEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV-----KGRTWXLCGTPEYL 206
Query: 130 APEYAMTGQLNAKSDVYSFGVVLLELLTGRKPV 162
APE ++ N D ++ GV++ E+ G P
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 8/93 (8%)
Query: 70 LEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYH 129
EYLH +I+RD+K N++I K+ DF + + + + + GT Y
Sbjct: 154 FEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 130 APEYAMTGQLNAKSDVYSFGVVLLELLTGRKPV 162
APE ++ N D ++ GV++ E+ G P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 8/93 (8%)
Query: 70 LEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYH 129
EYLH +I+RD+K N++I K+ DF + + + + + GT Y
Sbjct: 155 FEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV-----KGRTWXLCGTPEYL 206
Query: 130 APEYAMTGQLNAKSDVYSFGVVLLELLTGRKPV 162
APE ++ N D ++ GV++ E+ G P
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 8/93 (8%)
Query: 70 LEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYH 129
EYLH +I+RD+K N++I K+ DF + + + + + GT Y
Sbjct: 154 FEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 130 APEYAMTGQLNAKSDVYSFGVVLLELLTGRKPV 162
APE ++ N D ++ GV++ E+ G P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 16/110 (14%)
Query: 70 LEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQ-APDMAARLHSTRVLGTFGY 128
LE +H I+H D+K +N LI D + K+ DF ++NQ PD + + ++V GT Y
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQV-GTVNY 222
Query: 129 HAPEYAMTGQLNAKS------------DVYSFGVVLLELLTGRKPVDHTL 166
PE A+ +++ DV+S G +L + G+ P +
Sbjct: 223 MPPE-AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII 271
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 8/93 (8%)
Query: 70 LEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYH 129
EYLH +I+RD+K N++I K+ DF + + + + + GT Y
Sbjct: 155 FEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV-----KGRTWXLCGTPEYL 206
Query: 130 APEYAMTGQLNAKSDVYSFGVVLLELLTGRKPV 162
APE ++ N D ++ GV++ E+ G P
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 62/152 (40%), Gaps = 29/152 (19%)
Query: 25 LAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHR 84
L +E GS+ +H R+ + V+ A L++LH K I HR
Sbjct: 88 LVFEKMRGGSILSHIHKRRHFNELEASVVVQ---------DVASALDFLHNKG---IAHR 135
Query: 85 DIKSSNVLIFDDDVA---KIADFDLS-------NQAPDMAARLHSTRVLGTFGYHAPEYA 134
D+K N+L + KI DFDL + +P L + G+ Y APE
Sbjct: 136 DLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTP--CGSAEYMAPEVV 193
Query: 135 MTGQLNA-----KSDVYSFGVVLLELLTGRKP 161
A + D++S GV+L LL+G P
Sbjct: 194 EAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 16/110 (14%)
Query: 70 LEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQ-APDMAARLHSTRVLGTFGY 128
LE +H I+H D+K +N LI D + K+ DF ++NQ PD + + ++V GT Y
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQV-GTVNY 222
Query: 129 HAPEYAMTGQLNAKS------------DVYSFGVVLLELLTGRKPVDHTL 166
PE A+ +++ DV+S G +L + G+ P +
Sbjct: 223 MPPE-AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII 271
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 8/92 (8%)
Query: 70 LEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYH 129
EYLH +I+RD+K N+LI + ++ DF + + L GT Y
Sbjct: 141 FEYLH---SLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWXL-----CGTPEYL 192
Query: 130 APEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
APE ++ N D ++ GV++ E+ G P
Sbjct: 193 APEIILSKGYNKAVDWWALGVLIYEMAAGYPP 224
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 8/92 (8%)
Query: 70 LEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYH 129
EYLH +I+RD+K N++I ++ DF L+ + + + + GT Y
Sbjct: 154 FEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRV-----KGRTWXLCGTPEYL 205
Query: 130 APEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
APE ++ N D ++ GV++ E+ G P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 61/146 (41%), Gaps = 23/146 (15%)
Query: 25 LAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVK---------IAVGAAKGLEYLHE 75
L Y F N +L+ ++ G G + S +R+ A EYLH
Sbjct: 106 LEYSFKDNSNLYMVMEYVPG------GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH- 158
Query: 76 KADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAM 135
+I+RD+K N+LI ++ DF + + + + + GT Y APE +
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIIL 211
Query: 136 TGQLNAKSDVYSFGVVLLELLTGRKP 161
+ N D ++ GV++ E+ G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 61/147 (41%), Gaps = 23/147 (15%)
Query: 25 LAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVK---------IAVGAAKGLEYLHE 75
L Y F N +L+ ++ G G + S +R+ A EYLH
Sbjct: 106 LEYSFKDNSNLYMVMEYVPG------GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH- 158
Query: 76 KADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAM 135
+I+RD+K N+LI ++ DF + + + + + GT Y APE +
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIIL 211
Query: 136 TGQLNAKSDVYSFGVVLLELLTGRKPV 162
+ N D ++ GV++ E+ G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 59/147 (40%), Gaps = 23/147 (15%)
Query: 25 LAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVK---------IAVGAAKGLEYLHE 75
L Y F N +L+ ++ G G + S +R+ A EYLH
Sbjct: 106 LEYSFKDNSNLYMVMEYVPG------GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH- 158
Query: 76 KADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAM 135
+I+RD+K N+LI ++ DF + + L GT Y APE +
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-----CGTPEYLAPEIIL 211
Query: 136 TGQLNAKSDVYSFGVVLLELLTGRKPV 162
+ N D ++ GV++ E+ G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 61/143 (42%), Gaps = 17/143 (11%)
Query: 19 DGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKAD 78
D ++ + E+ + G + H R+ + A+P A EYLH
Sbjct: 112 DNSNLYMVMEYVAGGEMFS--HLRRIGRFAEPHARF-------YAAQIVLTFEYLH---S 159
Query: 79 PHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQ 138
+I+RD+K N+LI ++ DF + + + + + GT Y APE ++
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIILSKG 214
Query: 139 LNAKSDVYSFGVVLLELLTGRKP 161
N D ++ GV++ E+ G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 8/92 (8%)
Query: 70 LEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYH 129
EYLH +I+RD+K N+LI ++ DF + + L GT Y
Sbjct: 175 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-----CGTPEYL 226
Query: 130 APEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
APE ++ N D ++ GV++ E+ G P
Sbjct: 227 APEIILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 8/92 (8%)
Query: 70 LEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYH 129
EYLH +I+RD+K N+LI ++ DF + + L GT Y
Sbjct: 175 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWTL-----CGTPEYL 226
Query: 130 APEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
APE ++ N D ++ GV++ E+ G P
Sbjct: 227 APEIILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 8/92 (8%)
Query: 70 LEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYH 129
EYLH +I+RD+K N+LI ++ DF + + + + + GT Y
Sbjct: 175 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 226
Query: 130 APEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
APE ++ N D ++ GV++ E+ G P
Sbjct: 227 APEIILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 8/92 (8%)
Query: 70 LEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYH 129
EYLH +I+RD+K N+LI ++ DF + + L GT Y
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-----CGTPEYL 205
Query: 130 APEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
APE ++ N D ++ GV++ E+ G P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 8/92 (8%)
Query: 70 LEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYH 129
EYLH +I+RD+K N+LI ++ DF + + + + + GT Y
Sbjct: 155 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 206
Query: 130 APEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
APE ++ N D ++ GV++ E+ G P
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 8/92 (8%)
Query: 70 LEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYH 129
EYLH +I+RD+K N+LI ++ DF + + L GT Y
Sbjct: 155 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-----CGTPEYL 206
Query: 130 APEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
APE ++ N D ++ GV++ E+ G P
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 8/92 (8%)
Query: 70 LEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYH 129
EYLH +I+RD+K N+LI ++ DF + + + + + GT Y
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 130 APEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
APE ++ N D ++ GV++ E+ G P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 8/92 (8%)
Query: 70 LEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYH 129
EYLH +I+RD+K N+LI ++ DF + + + + + GT Y
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 130 APEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
APE ++ N D ++ GV++ E+ G P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 8/92 (8%)
Query: 70 LEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYH 129
EYLH +I+RD+K N+LI ++ DF + + + + + GT Y
Sbjct: 155 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 206
Query: 130 APEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
APE ++ N D ++ GV++ E+ G P
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 8/92 (8%)
Query: 70 LEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYH 129
EYLH +I+RD+K N+LI ++ DF + + L GT Y
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-----CGTPEYL 205
Query: 130 APEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
APE ++ N D ++ GV++ E+ G P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 8/92 (8%)
Query: 70 LEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYH 129
EYLH +I+RD+K N+LI ++ DF + + L GT Y
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-----CGTPEYL 205
Query: 130 APEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
APE ++ N D ++ GV++ E+ G P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 8/92 (8%)
Query: 70 LEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYH 129
EYLH +I+RD+K N+LI ++ DF + + + + + GT Y
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 130 APEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
APE ++ N D ++ GV++ E+ G P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 8/92 (8%)
Query: 70 LEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYH 129
EYLH +I+RD+K N+LI ++ DF + + + + + GT Y
Sbjct: 155 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 206
Query: 130 APEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
APE ++ N D ++ GV++ E+ G P
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 8/92 (8%)
Query: 70 LEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYH 129
EYLH +I+RD+K N+LI ++ DF + + + + + GT Y
Sbjct: 155 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 206
Query: 130 APEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
APE ++ N D ++ GV++ E+ G P
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 8/92 (8%)
Query: 70 LEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYH 129
EYLH +I+RD+K N+LI ++ DF + + L GT Y
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-----CGTPEYL 205
Query: 130 APEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
APE ++ N D ++ GV++ E+ G P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 8/92 (8%)
Query: 70 LEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYH 129
EYLH +I+RD+K N+LI ++ DF + + + + + GT Y
Sbjct: 155 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 206
Query: 130 APEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
APE ++ N D ++ GV++ E+ G P
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 8/92 (8%)
Query: 70 LEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYH 129
EYLH +I+RD+K N+LI ++ DF + + + + + GT Y
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 130 APEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
APE ++ N D ++ GV++ E+ G P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 75/174 (43%), Gaps = 15/174 (8%)
Query: 5 LKHENFVQLL-GYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIA 63
LKH + V+LL Y DG + +EF L + VK A G V S
Sbjct: 85 LKHPHIVELLETYSSDGM-LYMVFEFMDGADLCFEI-----VKRADAGFVYSEAVASHYM 138
Query: 64 VGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVA---KIADFDLSNQAPDMAARLHST 120
+ L Y H D +IIHRD+K VL+ + + K+ F ++ Q + + +
Sbjct: 139 RQILEALRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGE-SGLVAGG 194
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLV 174
RV GT + APE DV+ GV+L LL+G P T R + ++
Sbjct: 195 RV-GTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGII 247
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 8/92 (8%)
Query: 70 LEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYH 129
EYLH +I+RD+K N+LI ++ DF + + + + + GT Y
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 130 APEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
APE ++ N D ++ GV++ E+ G P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 8/92 (8%)
Query: 70 LEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYH 129
EYLH +I+RD+K N+LI ++ DF + + + + + GT Y
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 130 APEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
APE ++ N D ++ GV++ E+ G P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 8/92 (8%)
Query: 70 LEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYH 129
EYLH +I+RD+K N+LI ++ DF + + + + + GT Y
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 130 APEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
APE ++ N D ++ GV++ E+ G P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 8/92 (8%)
Query: 70 LEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYH 129
EYLH +I+RD+K N+LI ++ DF + + + + + GT Y
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 130 APEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
APE ++ N D ++ GV++ E+ G P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 8/92 (8%)
Query: 70 LEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYH 129
EYLH +I+RD+K N+LI ++ DF + + + + + GT Y
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 130 APEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
APE ++ N D ++ GV++ E+ G P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 8/92 (8%)
Query: 70 LEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYH 129
EYLH +I+RD+K N+LI ++ DF + + + + + GT Y
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 130 APEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
APE ++ N D ++ GV++ E+ G P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 75/174 (43%), Gaps = 15/174 (8%)
Query: 5 LKHENFVQLL-GYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIA 63
LKH + V+LL Y DG + +EF L + VK A G V S
Sbjct: 83 LKHPHIVELLETYSSDGM-LYMVFEFMDGADL-----CFEIVKRADAGFVYSEAVASHYM 136
Query: 64 VGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVA---KIADFDLSNQAPDMAARLHST 120
+ L Y H D +IIHRD+K VL+ + + K+ F ++ Q + + +
Sbjct: 137 RQILEALRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGE-SGLVAGG 192
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLV 174
RV GT + APE DV+ GV+L LL+G P T R + ++
Sbjct: 193 RV-GTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGII 245
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 8/92 (8%)
Query: 70 LEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYH 129
EYLH +I+RD+K N+LI ++ DF + + + + + GT Y
Sbjct: 155 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWTLCGTPEYL 206
Query: 130 APEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
APE ++ N D ++ GV++ E+ G P
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 8/92 (8%)
Query: 70 LEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYH 129
EYLH +I+RD+K N+LI ++ DF + + L GT Y
Sbjct: 149 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-----CGTPEYL 200
Query: 130 APEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
APE ++ N D ++ GV++ E+ G P
Sbjct: 201 APEIILSKGYNKAVDWWALGVLIYEMAAGYPP 232
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 8/92 (8%)
Query: 70 LEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYH 129
EYLH +I+RD+K N+LI ++ DF + + L GT Y
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLX-----GTPEYL 205
Query: 130 APEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
APE ++ N D ++ GV++ E+ G P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 8/92 (8%)
Query: 70 LEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYH 129
EYLH +I+RD+K N+LI ++ DF + + L GT Y
Sbjct: 147 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-----CGTPEYL 198
Query: 130 APEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
APE ++ N D ++ GV++ E+ G P
Sbjct: 199 APEIILSKGYNKAVDWWALGVLIYEMAAGYPP 230
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 16/110 (14%)
Query: 70 LEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQA-PDMAARLHSTRVLGTFGY 128
LE +H I+H D+K +N LI D + K+ DF ++NQ PD + ++V GT Y
Sbjct: 137 LEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDXXXVVKDSQV-GTVNY 194
Query: 129 HAPEYAMTGQLNAKS------------DVYSFGVVLLELLTGRKPVDHTL 166
PE A+ +++ DV+S G +L + G+ P +
Sbjct: 195 MPPE-AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII 243
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 8/92 (8%)
Query: 70 LEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYH 129
EYLH +I+RD+K N+LI ++ DF + + L GT Y
Sbjct: 140 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTL-----CGTPEYL 191
Query: 130 APEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
APE ++ N D ++ GV++ E+ G P
Sbjct: 192 APEIILSKGYNKAVDWWALGVLIYEMAAGYPP 223
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 8/92 (8%)
Query: 70 LEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYH 129
EYLH +I+RD+K N+LI ++ DF + + L GT Y
Sbjct: 147 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-----CGTPEYL 198
Query: 130 APEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
APE ++ N D ++ GV++ E+ G P
Sbjct: 199 APEIILSKGYNKAVDWWALGVLIYEMAAGYPP 230
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 65/141 (46%), Gaps = 16/141 (11%)
Query: 24 VLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIH 83
+L E+A+ G + + + ++S +++ +G+ YLH+ +I+H
Sbjct: 105 ILILEYAAGGEIFSLCL-------PELAEMVSENDVIRLIKQILEGVYYLHQN---NIVH 154
Query: 84 RDIKSSNVL---IFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLN 140
D+K N+L I+ KI DF +S + A L ++GT Y APE +
Sbjct: 155 LDLKPQNILLSSIYPLGDIKIVDFGMSRKIGH-ACELR--EIMGTPEYLAPEILNYDPIT 211
Query: 141 AKSDVYSFGVVLLELLTGRKP 161
+D+++ G++ LLT P
Sbjct: 212 TATDMWNIGIIAYMLLTHTSP 232
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 8/92 (8%)
Query: 70 LEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYH 129
EYLH +I+RD+K N+LI ++ DF + + + + + GT Y
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLAGTPEYL 205
Query: 130 APEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
APE ++ N D ++ GV++ E+ G P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Query: 81 IIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLN 140
IIHRDIK N++I +D K+ DF + A +L T GT Y APE M
Sbjct: 151 IIHRDIKDENIVIAEDFTIKLIDF--GSAAYLERGKLFYT-FCGTIEYCAPEVLMGNPYR 207
Query: 141 A-KSDVYSFGVVLLELLTGRKP 161
+ +++S GV L L+ P
Sbjct: 208 GPELEMWSLGVTLYTLVFEENP 229
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Query: 69 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 128
GL LHE ++HRD+ N+L+ D++ I DF+L+ + A + T + Y
Sbjct: 146 GLHVLHEAG---VVHRDLHPGNILLADNNDITICDFNLARED---TADANKTHYVTHRWY 199
Query: 129 HAPEYAMTGQ-LNAKSDVYSFGVVLLELLTGR 159
APE M + D++S G V+ E+ +
Sbjct: 200 RAPELVMQFKGFTKLVDMWSAGCVMAEMFNRK 231
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Query: 69 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 128
GL LHE ++HRD+ N+L+ D++ I DF+L+ + A + T + Y
Sbjct: 146 GLHVLHEAG---VVHRDLHPGNILLADNNDITICDFNLARED---TADANKTHYVTHRWY 199
Query: 129 HAPEYAMTGQ-LNAKSDVYSFGVVLLELLTGR 159
APE M + D++S G V+ E+ +
Sbjct: 200 RAPELVMQFKGFTKLVDMWSAGCVMAEMFNRK 231
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 8/93 (8%)
Query: 70 LEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYH 129
EYLH +I+RD+K N++I ++ DF + + + + + GT Y
Sbjct: 154 FEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 130 APEYAMTGQLNAKSDVYSFGVVLLELLTGRKPV 162
APE ++ N D ++ GV++ E+ G P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 80 HIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEY--AM-- 135
H +HRDIK N+L+ + ++ADF + + + S+ +GT Y +PE AM
Sbjct: 195 HYVHRDIKPDNILMDMNGHIRLADFGSCLKLME-DGTVQSSVAVGTPDYISPEILQAMEG 253
Query: 136 -TGQLNAKSDVYSFGVVLLELLTGRKP 161
G+ + D +S GV + E+L G P
Sbjct: 254 GKGRYGPECDWWSLGVCMYEMLYGETP 280
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 8/92 (8%)
Query: 70 LEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYH 129
EYLH +I+RD+K N++I ++ DF + + L GT Y
Sbjct: 154 FEYLH---SLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTWXL-----CGTPEYL 205
Query: 130 APEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
APE ++ N D ++ GV++ E+ G P
Sbjct: 206 APEIIISKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 9/107 (8%)
Query: 58 QRVKIAVGAA-KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAAR 116
Q +K + + Y+H + +I HRD+K SN+L+ + K++DF S D +
Sbjct: 151 QVIKCIIKSVLNSFSYIHN--EKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVD--KK 206
Query: 117 LHSTRVLGTFGYHAPE-YAMTGQLN-AKSDVYSFGVVLLELLTGRKP 161
+ +R GT+ + PE ++ N AK D++S G+ L + P
Sbjct: 207 IKGSR--GTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVP 251
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 59/137 (43%), Gaps = 29/137 (21%)
Query: 45 VKGAQPGPVLSWQQRVK-IAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIAD 103
+K P+ ++ +K I G ++HE IIHRD+K +N L+ D K+ D
Sbjct: 116 LKKLFKTPIFLTEEHIKTILYNLLLGENFIHESG---IIHRDLKPANCLLNQDCSVKVCD 172
Query: 104 FDLS-----------------NQAP-----DMAARLHSTRVLGTFGYHAPEYAMTGQLNA 141
F L+ N+ P ++ +L S V T Y APE + +
Sbjct: 173 FGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVV--TRWYRAPELILLQENYT 230
Query: 142 KS-DVYSFGVVLLELLT 157
KS D++S G + ELL
Sbjct: 231 KSIDIWSTGCIFAELLN 247
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 52/110 (47%), Gaps = 16/110 (14%)
Query: 70 LEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQ-APDMAARLHSTRVLGTFGY 128
LE +H I+H D+K +N LI D + K+ DF ++NQ PD + + ++V G Y
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQV-GAVNY 222
Query: 129 HAPEYAMTGQLNAKS------------DVYSFGVVLLELLTGRKPVDHTL 166
PE A+ +++ DV+S G +L + G+ P +
Sbjct: 223 MPPE-AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII 271
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 8/92 (8%)
Query: 70 LEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYH 129
EYLH +I+RD+K N+LI ++ DF + + L GT Y
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-----CGTPEYL 205
Query: 130 APEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
APE ++ N D ++ GV++ ++ G P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYQMAAGYPP 237
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 72/178 (40%), Gaps = 37/178 (20%)
Query: 7 HENFVQLLGYCVDGTSR--VLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAV 64
HEN V LL R L +++ LH ++ +L + +
Sbjct: 68 HENIVNLLNVLRADNDRDVYLVFDYME-TDLHAVIRAN----------ILEPVHKQYVVY 116
Query: 65 GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHS----- 119
K ++YLH ++HRD+K SN+L+ + K+ADF LS ++ ++
Sbjct: 117 QLIKVIKYLHSGG---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSI 173
Query: 120 --------------TRVLGTFGYHAPEYAMTGQLNAKS-DVYSFGVVLLELLTGRKPV 162
T + T Y APE + K D++S G +L E+L G KP+
Sbjct: 174 NENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCG-KPI 230
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 73/177 (41%), Gaps = 48/177 (27%)
Query: 16 YCVDGTSRV-LAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLH 74
YC V +A + + S DIL+ LS+Q+ + + K L+ +H
Sbjct: 87 YCFRKNDHVVIAMPYLEHESFLDILNS------------LSFQEVREYMLNLFKALKRIH 134
Query: 75 EKADPHIIHRDIKSSNVLIFDDDVAKIA--DFDLSNQAPD-------------------- 112
+ I+HRD+K SN L ++ + K A DF L+ D
Sbjct: 135 QFG---IVHRDVKPSNFL-YNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQ 190
Query: 113 ------MAARLHSTRVLGTFGYHAPEYAMTGQLNAKS--DVYSFGVVLLELLTGRKP 161
++ R GT G+ APE +T N + D++S GV+ L LL+GR P
Sbjct: 191 NKCSICLSRRQQVAPRAGTPGFRAPE-VLTKCPNQTTAIDMWSAGVIFLSLLSGRYP 246
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 68/161 (42%), Gaps = 19/161 (11%)
Query: 5 LKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAV 64
LKH N V+L + L ++ + G L + + R+ A + QQ ++ +
Sbjct: 60 LKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCI--QQILEAVL 117
Query: 65 GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDD---DVAKIADFDLSNQAP-DMAARLHST 120
+ H+ ++HRD+K N+L+ K+ADF L+ + D A
Sbjct: 118 -------HCHQMG---VVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWF--- 164
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
GT GY +PE D+++ GV+L LL G P
Sbjct: 165 GFAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPP 205
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 15/99 (15%)
Query: 70 LEYLHEKADPHIIHRDIKSSNVLI-FDDDVAKIADFDLSNQAPDMAARLHS---TRVLGT 125
+++ H + ++HRDIK N+LI AK+ DF A LH T GT
Sbjct: 152 IQHCHSRG---VVHRDIKDENILIDLRRGCAKLIDF-------GSGALLHDEPYTDFDGT 201
Query: 126 FGYHAPEYAMTGQLNA-KSDVYSFGVVLLELLTGRKPVD 163
Y PE+ Q +A + V+S G++L +++ G P +
Sbjct: 202 RVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFE 240
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 8/94 (8%)
Query: 81 IIHRDIKSSNVLI-FDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQL 139
++HRDIK N+LI + K+ DF D T GT Y PE+ +
Sbjct: 136 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRYHRY 191
Query: 140 NAKS-DVYSFGVVLLELLTGRKPVDH--TLPRGQ 170
+ +S V+S G++L +++ G P +H + RGQ
Sbjct: 192 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQ 225
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 8/94 (8%)
Query: 81 IIHRDIKSSNVLI-FDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQL 139
++HRDIK N+LI + K+ DF D T GT Y PE+ +
Sbjct: 170 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRYHRY 225
Query: 140 NAKS-DVYSFGVVLLELLTGRKPVDH--TLPRGQ 170
+ +S V+S G++L +++ G P +H + RGQ
Sbjct: 226 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQ 259
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 44/99 (44%), Gaps = 5/99 (5%)
Query: 63 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRV 122
A A L YLH +I++RD+K N+L+ + DF L + ++ ++
Sbjct: 145 AAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKE--NIEHNSTTSTF 199
Query: 123 LGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
GT Y APE + D + G VL E+L G P
Sbjct: 200 CGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPP 238
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 8/94 (8%)
Query: 81 IIHRDIKSSNVLI-FDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQL 139
++HRDIK N+LI + K+ DF D T GT Y PE+ +
Sbjct: 183 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRYHRY 238
Query: 140 NAKS-DVYSFGVVLLELLTGRKPVDH--TLPRGQ 170
+ +S V+S G++L +++ G P +H + RGQ
Sbjct: 239 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQ 272
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 8/94 (8%)
Query: 81 IIHRDIKSSNVLI-FDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQL 139
++HRDIK N+LI + K+ DF D T GT Y PE+ +
Sbjct: 134 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRYHRY 189
Query: 140 NAKS-DVYSFGVVLLELLTGRKPVDH--TLPRGQ 170
+ +S V+S G++L +++ G P +H + RGQ
Sbjct: 190 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQ 223
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 8/94 (8%)
Query: 81 IIHRDIKSSNVLI-FDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQL 139
++HRDIK N+LI + K+ DF D T GT Y PE+ +
Sbjct: 151 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRYHRY 206
Query: 140 NAKS-DVYSFGVVLLELLTGRKPVDH--TLPRGQ 170
+ +S V+S G++L +++ G P +H + RGQ
Sbjct: 207 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQ 240
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 63/160 (39%), Gaps = 17/160 (10%)
Query: 5 LKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAV 64
LKH N V+L + L ++ + G L + + R+ A +
Sbjct: 87 LKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIH--------- 137
Query: 65 GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDD---DVAKIADFDLSNQAPDMAARLHSTR 121
+ LE ++ I+HRD+K N+L+ K+ADF L+ +
Sbjct: 138 ---QILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFG-- 192
Query: 122 VLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
GT GY +PE D+++ GV+L LL G P
Sbjct: 193 FAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPP 232
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 8/94 (8%)
Query: 81 IIHRDIKSSNVLI-FDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQL 139
++HRDIK N+LI + K+ DF D T GT Y PE+ +
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRYHRY 233
Query: 140 NAKS-DVYSFGVVLLELLTGRKPVDH--TLPRGQ 170
+ +S V+S G++L +++ G P +H + RGQ
Sbjct: 234 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQ 267
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 8/94 (8%)
Query: 81 IIHRDIKSSNVLI-FDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQL 139
++HRDIK N+LI + K+ DF D T GT Y PE+ +
Sbjct: 150 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRYHRY 205
Query: 140 NAKS-DVYSFGVVLLELLTGRKPVDH--TLPRGQ 170
+ +S V+S G++L +++ G P +H + RGQ
Sbjct: 206 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQ 239
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 8/94 (8%)
Query: 81 IIHRDIKSSNVLI-FDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQL 139
++HRDIK N+LI + K+ DF D T GT Y PE+ +
Sbjct: 158 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRYHRY 213
Query: 140 NAKS-DVYSFGVVLLELLTGRKPVDH--TLPRGQ 170
+ +S V+S G++L +++ G P +H + RGQ
Sbjct: 214 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQ 247
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 8/94 (8%)
Query: 81 IIHRDIKSSNVLI-FDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQL 139
++HRDIK N+LI + K+ DF D T GT Y PE+ +
Sbjct: 136 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRYHRY 191
Query: 140 NAKS-DVYSFGVVLLELLTGRKPVDH--TLPRGQ 170
+ +S V+S G++L +++ G P +H + RGQ
Sbjct: 192 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQ 225
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 8/94 (8%)
Query: 81 IIHRDIKSSNVLI-FDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQL 139
++HRDIK N+LI + K+ DF D T GT Y PE+ +
Sbjct: 151 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRYHRY 206
Query: 140 NAKS-DVYSFGVVLLELLTGRKPVDH--TLPRGQ 170
+ +S V+S G++L +++ G P +H + RGQ
Sbjct: 207 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQ 240
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 8/94 (8%)
Query: 81 IIHRDIKSSNVLI-FDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQL 139
++HRDIK N+LI + K+ DF D T GT Y PE+ +
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRYHRY 218
Query: 140 NAKS-DVYSFGVVLLELLTGRKPVDH--TLPRGQ 170
+ +S V+S G++L +++ G P +H + RGQ
Sbjct: 219 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQ 252
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 8/94 (8%)
Query: 81 IIHRDIKSSNVLI-FDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQL 139
++HRDIK N+LI + K+ DF D T GT Y PE+ +
Sbjct: 151 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRYHRY 206
Query: 140 NAKS-DVYSFGVVLLELLTGRKPVDH--TLPRGQ 170
+ +S V+S G++L +++ G P +H + RGQ
Sbjct: 207 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQ 240
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 8/94 (8%)
Query: 81 IIHRDIKSSNVLI-FDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQL 139
++HRDIK N+LI + K+ DF D T GT Y PE+ +
Sbjct: 150 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRYHRY 205
Query: 140 NAKS-DVYSFGVVLLELLTGRKPVDH--TLPRGQ 170
+ +S V+S G++L +++ G P +H + RGQ
Sbjct: 206 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQ 239
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 8/94 (8%)
Query: 81 IIHRDIKSSNVLI-FDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQL 139
++HRDIK N+LI + K+ DF D T GT Y PE+ +
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRYHRY 186
Query: 140 NAKS-DVYSFGVVLLELLTGRKPVDH--TLPRGQ 170
+ +S V+S G++L +++ G P +H + RGQ
Sbjct: 187 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQ 220
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 8/94 (8%)
Query: 81 IIHRDIKSSNVLI-FDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQL 139
++HRDIK N+LI + K+ DF D T GT Y PE+ +
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRYHRY 233
Query: 140 NAKS-DVYSFGVVLLELLTGRKPVDH--TLPRGQ 170
+ +S V+S G++L +++ G P +H + RGQ
Sbjct: 234 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQ 267
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 8/94 (8%)
Query: 81 IIHRDIKSSNVLI-FDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQL 139
++HRDIK N+LI + K+ DF D T GT Y PE+ +
Sbjct: 135 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRYHRY 190
Query: 140 NAKS-DVYSFGVVLLELLTGRKPVDH--TLPRGQ 170
+ +S V+S G++L +++ G P +H + RGQ
Sbjct: 191 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQ 224
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 8/94 (8%)
Query: 81 IIHRDIKSSNVLI-FDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQL 139
++HRDIK N+LI + K+ DF D T GT Y PE+ +
Sbjct: 136 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRYHRY 191
Query: 140 NAKS-DVYSFGVVLLELLTGRKPVDH--TLPRGQ 170
+ +S V+S G++L +++ G P +H + RGQ
Sbjct: 192 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQ 225
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 8/94 (8%)
Query: 81 IIHRDIKSSNVLI-FDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQL 139
++HRDIK N+LI + K+ DF D T GT Y PE+ +
Sbjct: 135 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRYHRY 190
Query: 140 NAKS-DVYSFGVVLLELLTGRKPVDH--TLPRGQ 170
+ +S V+S G++L +++ G P +H + RGQ
Sbjct: 191 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQ 224
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 8/94 (8%)
Query: 81 IIHRDIKSSNVLI-FDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQL 139
++HRDIK N+LI + K+ DF D T GT Y PE+ +
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRYHRY 233
Query: 140 NAKS-DVYSFGVVLLELLTGRKPVDH--TLPRGQ 170
+ +S V+S G++L +++ G P +H + RGQ
Sbjct: 234 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQ 267
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 8/94 (8%)
Query: 81 IIHRDIKSSNVLI-FDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQL 139
++HRDIK N+LI + K+ DF D T GT Y PE+ +
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRYHRY 186
Query: 140 NAKS-DVYSFGVVLLELLTGRKPVDH--TLPRGQ 170
+ +S V+S G++L +++ G P +H + RGQ
Sbjct: 187 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQ 220
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 47/98 (47%), Gaps = 6/98 (6%)
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
K A + L+ LH+ IIH D+K N+L+ + I D + + R++ T
Sbjct: 204 KFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDFGSSCYE-HQRVY-T 258
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTG 158
+ F Y APE + + D++S G +L ELLTG
Sbjct: 259 XIQSRF-YRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 67/161 (41%), Gaps = 19/161 (11%)
Query: 5 LKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAV 64
LKH N V+L + L ++ + G L + + R+ A + Q++
Sbjct: 60 LKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCI---QQI---- 112
Query: 65 GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDD---VAKIADFDLSNQAP-DMAARLHST 120
LE ++ I+HRD+K N+L+ K+ADF L+ + D A
Sbjct: 113 -----LESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFA 167
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
GT GY +PE D+++ GV+L LL G P
Sbjct: 168 ---GTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPP 205
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 61/152 (40%), Gaps = 29/152 (19%)
Query: 25 LAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHR 84
L +E GS+ +H R+ + V+ A L++LH K I HR
Sbjct: 88 LVFEKMRGGSILSHIHKRRHFNELEASVVVQ---------DVASALDFLHNKG---IAHR 135
Query: 85 DIKSSNVLIFDDDVA---KIADFDLS-------NQAPDMAARLHSTRVLGTFGYHAPEYA 134
D+K N+L + KI DF L + +P L + G+ Y APE
Sbjct: 136 DLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTP--CGSAEYMAPEVV 193
Query: 135 MTGQLNA-----KSDVYSFGVVLLELLTGRKP 161
A + D++S GV+L LL+G P
Sbjct: 194 EAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 67/161 (41%), Gaps = 19/161 (11%)
Query: 5 LKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAV 64
LKH N V+L + L ++ + G L + + R+ A + Q++
Sbjct: 60 LKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCI---QQI---- 112
Query: 65 GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDD---VAKIADFDLSNQAP-DMAARLHST 120
LE ++ I+HRD+K N+L+ K+ADF L+ + D A
Sbjct: 113 -----LESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFG-- 165
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
GT GY +PE D+++ GV+L LL G P
Sbjct: 166 -FAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPP 205
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 47/98 (47%), Gaps = 6/98 (6%)
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 120
K A + L+ LH+ IIH D+K N+L+ + I D + + R++ T
Sbjct: 204 KFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDFGSSCYE-HQRVY-T 258
Query: 121 RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTG 158
+ F Y APE + + D++S G +L ELLTG
Sbjct: 259 XIQSRF-YRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 8/92 (8%)
Query: 70 LEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYH 129
EYLH +I+RD+K N+LI ++ DF + + + + + GT Y
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VKGRTWXLCGTPEYL 205
Query: 130 APEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
AP ++ N D ++ GV++ E+ G P
Sbjct: 206 APAIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 57/141 (40%), Gaps = 28/141 (19%)
Query: 45 VKGAQPGPVLSWQQRVK-IAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIAD 103
+K P+ +Q VK I G +++HE IIHRD+K +N L+ D KI D
Sbjct: 118 LKKLFKTPIFLTEQHVKTILYNLLLGEKFIHESG---IIHRDLKPANCLLNQDCSVKICD 174
Query: 104 FDLS---NQAPDM--------------------AARLHSTRVLGTFGYHAPEYAMTGQLN 140
F L+ N D+ + T + T Y APE + +
Sbjct: 175 FGLARTINSDKDIHIVNDLEEKEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENY 234
Query: 141 AKS-DVYSFGVVLLELLTGRK 160
S D++S G + ELL K
Sbjct: 235 TNSIDIWSTGCIFAELLNMMK 255
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Query: 81 IIHRDIKSSNVLI-FDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQL 139
++HRDIK N+LI + K+ DF D T GT Y PE+ +
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRYHRY 218
Query: 140 NAKS-DVYSFGVVLLELLTGRKPVDH 164
+ +S V+S G++L +++ G P +H
Sbjct: 219 HGRSAAVWSLGILLYDMVCGDIPFEH 244
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Query: 81 IIHRDIKSSNVLI-FDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQL 139
++HRDIK N+LI + K+ DF D T GT Y PE+ +
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRYHRY 218
Query: 140 NAKS-DVYSFGVVLLELLTGRKPVDH 164
+ +S V+S G++L +++ G P +H
Sbjct: 219 HGRSAAVWSLGILLYDMVCGDIPFEH 244
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Query: 81 IIHRDIKSSNVLI-FDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQL 139
++HRDIK N+LI + K+ DF D T GT Y PE+ +
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRYHRY 219
Query: 140 NAKS-DVYSFGVVLLELLTGRKPVDH 164
+ +S V+S G++L +++ G P +H
Sbjct: 220 HGRSAAVWSLGILLYDMVCGDIPFEH 245
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Query: 81 IIHRDIKSSNVLI-FDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQL 139
++HRDIK N+LI + K+ DF D T GT Y PE+ +
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRYHRY 219
Query: 140 NAKS-DVYSFGVVLLELLTGRKPVDH 164
+ +S V+S G++L +++ G P +H
Sbjct: 220 HGRSAAVWSLGILLYDMVCGDIPFEH 245
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Query: 81 IIHRDIKSSNVLI-FDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQL 139
++HRDIK N+LI + K+ DF D T GT Y PE+ +
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRYHRY 219
Query: 140 NAKS-DVYSFGVVLLELLTGRKPVDH 164
+ +S V+S G++L +++ G P +H
Sbjct: 220 HGRSAAVWSLGILLYDMVCGDIPFEH 245
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Query: 81 IIHRDIKSSNVLI-FDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQL 139
++HRDIK N+LI + K+ DF D T GT Y PE+ +
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRYHRY 219
Query: 140 NAKS-DVYSFGVVLLELLTGRKPVDH 164
+ +S V+S G++L +++ G P +H
Sbjct: 220 HGRSAAVWSLGILLYDMVCGDIPFEH 245
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Query: 81 IIHRDIKSSNVLI-FDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQL 139
++HRDIK N+LI + K+ DF D T GT Y PE+ +
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRYHRY 218
Query: 140 NAKS-DVYSFGVVLLELLTGRKPVDH 164
+ +S V+S G++L +++ G P +H
Sbjct: 219 HGRSAAVWSLGILLYDMVCGDIPFEH 244
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 9/104 (8%)
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFD---DDVAKIADFDLSNQAPDMAARL 117
+I + ++YLH +I HRD+K N+L + + K+ DF A + +
Sbjct: 119 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGF---AKETTSHN 172
Query: 118 HSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
T T Y APE + + D++S GV++ LL G P
Sbjct: 173 SLTEPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 216
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 66/160 (41%), Gaps = 17/160 (10%)
Query: 5 LKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAV 64
LKH N V+L + L ++ + G L + + R+ A + QQ ++ +
Sbjct: 78 LKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCI--QQILEAVL 135
Query: 65 GAAKGLEYLHEKADPHIIHRDIKSSNVLI---FDDDVAKIADFDLSNQAPDMAARLHSTR 121
+ H+ ++HRD+K N+L+ K+ADF L+ +
Sbjct: 136 -------HCHQMG---VVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFG-- 183
Query: 122 VLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
GT GY +PE D+++ GV+L LL G P
Sbjct: 184 FAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPP 223
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Query: 81 IIHRDIKSSNVLI-FDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQL 139
++HRDIK N+LI + K+ DF D T GT Y PE+ +
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRYHRY 186
Query: 140 NAKS-DVYSFGVVLLELLTGRKPVDH 164
+ +S V+S G++L +++ G P +H
Sbjct: 187 HGRSAAVWSLGILLYDMVCGDIPFEH 212
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 6/98 (6%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 127
K L+Y H K I+HRD+K NV+I D K+ D A+ ++ RV +
Sbjct: 148 KALDYCHSKG---IMHRDVKPHNVMI-DHQQKKLRLIDWGLAEFYHPAQEYNVRVASRY- 202
Query: 128 YHAPEYAMTGQLNAKS-DVYSFGVVLLELLTGRKPVDH 164
+ PE + Q+ S D++S G +L ++ R+P H
Sbjct: 203 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFH 240
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 44/94 (46%), Gaps = 8/94 (8%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDD-VAKIADFDLSNQAPDMAARLHSTRVLGTF 126
+ L Y+H I HRDIK N+L+ D V K+ DF + Q + + + +
Sbjct: 171 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ---LVRGEPNVSYICSR 224
Query: 127 GYHAPEYAM-TGQLNAKSDVYSFGVVLLELLTGR 159
Y APE + DV+S G VL ELL G+
Sbjct: 225 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 9/104 (8%)
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFD---DDVAKIADFDLSNQAPDMAARL 117
+I + ++YLH +I HRD+K N+L + + K+ DF A + +
Sbjct: 126 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGF---AKETTSHN 179
Query: 118 HSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
T T Y APE + + D++S GV++ LL G P
Sbjct: 180 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 223
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 9/104 (8%)
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFD---DDVAKIADFDLSNQAPDMAARL 117
+I + ++YLH +I HRD+K N+L + + K+ DF A + +
Sbjct: 135 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGF---AKETTSHN 188
Query: 118 HSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
T T Y APE + + D++S GV++ LL G P
Sbjct: 189 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 232
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 9/104 (8%)
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFD---DDVAKIADFDLSNQAPDMAARL 117
+I + ++YLH +I HRD+K N+L + + K+ DF A + +
Sbjct: 127 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGF---AKETTSHN 180
Query: 118 HSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
T T Y APE + + D++S GV++ LL G P
Sbjct: 181 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 224
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 48/108 (44%), Gaps = 10/108 (9%)
Query: 57 QQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFD---DDVAKIADFDLSNQAPDM 113
++ +I +++LH +I HRD+K N+L D V K+ DF + +
Sbjct: 128 REAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQN 184
Query: 114 AARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
A + T Y APE + + D++S GV++ LL G P
Sbjct: 185 ALQTPCY----TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPP 228
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 9/104 (8%)
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFD---DDVAKIADFDLSNQAPDMAARL 117
+I + ++YLH +I HRD+K N+L + + K+ DF A + +
Sbjct: 125 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGF---AKETTSHN 178
Query: 118 HSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
T T Y APE + + D++S GV++ LL G P
Sbjct: 179 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 222
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 6/98 (6%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 127
K L+Y H K I+HRD+K NV+I D K+ D A+ ++ RV +
Sbjct: 143 KALDYCHSKG---IMHRDVKPHNVMI-DHQQKKLRLIDWGLAEFYHPAQEYNVRVASRY- 197
Query: 128 YHAPEYAMTGQLNAKS-DVYSFGVVLLELLTGRKPVDH 164
+ PE + Q+ S D++S G +L ++ R+P H
Sbjct: 198 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFH 235
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 44/94 (46%), Gaps = 8/94 (8%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDD-VAKIADFDLSNQAPDMAARLHSTRVLGTF 126
+ L Y+H I HRDIK N+L+ D V K+ DF + Q + + + +
Sbjct: 169 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ---LVRGEPNVSYICSR 222
Query: 127 GYHAPEYAM-TGQLNAKSDVYSFGVVLLELLTGR 159
Y APE + DV+S G VL ELL G+
Sbjct: 223 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 44/94 (46%), Gaps = 8/94 (8%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDD-VAKIADFDLSNQAPDMAARLHSTRVLGTF 126
+ L Y+H I HRDIK N+L+ D V K+ DF + Q + + + +
Sbjct: 167 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ---LVRGEPNVSXICSR 220
Query: 127 GYHAPEYAM-TGQLNAKSDVYSFGVVLLELLTGR 159
Y APE + DV+S G VL ELL G+
Sbjct: 221 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 44/94 (46%), Gaps = 8/94 (8%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDD-VAKIADFDLSNQAPDMAARLHSTRVLGTF 126
+ L Y+H I HRDIK N+L+ D V K+ DF + Q + + + +
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ---LVRGEPNVSXICSR 186
Query: 127 GYHAPEYAM-TGQLNAKSDVYSFGVVLLELLTGR 159
Y APE + DV+S G VL ELL G+
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 44/94 (46%), Gaps = 8/94 (8%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDD-VAKIADFDLSNQAPDMAARLHSTRVLGTF 126
+ L Y+H I HRDIK N+L+ D V K+ DF + Q + + + +
Sbjct: 167 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ---LVRGEPNVSYICSR 220
Query: 127 GYHAPEYAM-TGQLNAKSDVYSFGVVLLELLTGR 159
Y APE + DV+S G VL ELL G+
Sbjct: 221 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 44/94 (46%), Gaps = 8/94 (8%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDD-VAKIADFDLSNQAPDMAARLHSTRVLGTF 126
+ L Y+H I HRDIK N+L+ D V K+ DF + Q + + + +
Sbjct: 152 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ---LVRGEPNVSXICSR 205
Query: 127 GYHAPEYAM-TGQLNAKSDVYSFGVVLLELLTGR 159
Y APE + DV+S G VL ELL G+
Sbjct: 206 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 44/94 (46%), Gaps = 8/94 (8%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDD-VAKIADFDLSNQAPDMAARLHSTRVLGTF 126
+ L Y+H I HRDIK N+L+ D V K+ DF + Q + + + +
Sbjct: 161 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ---LVRGEPNVSYICSR 214
Query: 127 GYHAPEYAM-TGQLNAKSDVYSFGVVLLELLTGR 159
Y APE + DV+S G VL ELL G+
Sbjct: 215 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 9/104 (8%)
Query: 61 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFD---DDVAKIADFDLSNQAPDMAARL 117
+I + ++YLH +I HRD+K N+L + + K+ DF A + +
Sbjct: 119 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGF---AKETTSHN 172
Query: 118 HSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
T T Y APE + + D++S GV++ LL G P
Sbjct: 173 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 216
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 44/94 (46%), Gaps = 8/94 (8%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDD-VAKIADFDLSNQAPDMAARLHSTRVLGTF 126
+ L Y+H I HRDIK N+L+ D V K+ DF + Q + + + +
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ---LVRGEPNVSXICSR 186
Query: 127 GYHAPEYAM-TGQLNAKSDVYSFGVVLLELLTGR 159
Y APE + DV+S G VL ELL G+
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 48/108 (44%), Gaps = 10/108 (9%)
Query: 57 QQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFD---DDVAKIADFDLSNQAPDM 113
++ +I +++LH +I HRD+K N+L D V K+ DF + +
Sbjct: 109 REAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQN 165
Query: 114 AARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 161
A + T Y APE + + D++S GV++ LL G P
Sbjct: 166 ALQTPCY----TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPP 209
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 44/94 (46%), Gaps = 8/94 (8%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDD-VAKIADFDLSNQAPDMAARLHSTRVLGTF 126
+ L Y+H I HRDIK N+L+ D V K+ DF + Q + + + +
Sbjct: 212 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ---LVRGEPNVSYICSR 265
Query: 127 GYHAPEYAM-TGQLNAKSDVYSFGVVLLELLTGR 159
Y APE + DV+S G VL ELL G+
Sbjct: 266 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 44/94 (46%), Gaps = 8/94 (8%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDD-VAKIADFDLSNQAPDMAARLHSTRVLGTF 126
+ L Y+H I HRDIK N+L+ D V K+ DF + Q + + + +
Sbjct: 141 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ---LVRGEPNVSXICSR 194
Query: 127 GYHAPEYAM-TGQLNAKSDVYSFGVVLLELLTGR 159
Y APE + DV+S G VL ELL G+
Sbjct: 195 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 44/94 (46%), Gaps = 8/94 (8%)
Query: 68 KGLEYLHEKADPHIIHRDIKSSNVLIFDDD-VAKIADFDLSNQAPDMAARLHSTRVLGTF 126
+ L Y+H I HRDIK N+L+ D V K+ DF + Q + + + +
Sbjct: 145 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ---LVRGEPNVSXICSR 198
Query: 127 GYHAPEYAM-TGQLNAKSDVYSFGVVLLELLTGR 159
Y APE + DV+S G VL ELL G+
Sbjct: 199 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.136 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,468,614
Number of Sequences: 62578
Number of extensions: 293747
Number of successful extensions: 2703
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 836
Number of HSP's successfully gapped in prelim test: 259
Number of HSP's that attempted gapping in prelim test: 694
Number of HSP's gapped (non-prelim): 1113
length of query: 247
length of database: 14,973,337
effective HSP length: 96
effective length of query: 151
effective length of database: 8,965,849
effective search space: 1353843199
effective search space used: 1353843199
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 50 (23.9 bits)