Query 025817
Match_columns 247
No_of_seqs 206 out of 1398
Neff 8.2
Searched_HMMs 46136
Date Fri Mar 29 09:54:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025817.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/025817hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0223 Aquaporin (major intri 100.0 3E-53 6.5E-58 356.9 21.2 230 8-245 2-235 (238)
2 PLN00166 aquaporin TIP2; Provi 100.0 6.6E-51 1.4E-55 348.0 24.4 242 6-247 7-249 (250)
3 PLN00027 aquaporin TIP; Provis 100.0 1.2E-50 2.6E-55 347.4 23.4 243 5-247 8-252 (252)
4 PLN00184 aquaporin NIP1; Provi 100.0 2.6E-49 5.7E-54 344.4 23.2 225 12-243 49-280 (296)
5 PLN00167 aquaporin TIP5; Provi 100.0 1.9E-48 4.1E-53 333.7 25.4 237 6-243 11-247 (256)
6 PLN00026 aquaporin NIP; Provi 100.0 2.9E-48 6.3E-53 337.2 21.5 224 13-244 67-290 (298)
7 KOG0224 Aquaporin (major intri 100.0 1E-49 2.2E-54 337.8 12.1 228 11-243 26-282 (316)
8 PF00230 MIP: Major intrinsic 100.0 1.3E-48 2.9E-53 331.2 18.2 222 10-231 1-227 (227)
9 PLN00182 putative aquaporin NI 100.0 3.6E-47 7.8E-52 329.1 23.0 216 15-237 40-255 (283)
10 PTZ00016 aquaglyceroporin; Pro 100.0 5.7E-47 1.2E-51 330.5 23.1 220 14-239 47-293 (294)
11 COG0580 GlpF Glycerol uptake f 100.0 3.3E-47 7.1E-52 319.4 19.8 219 14-236 2-240 (241)
12 PRK05420 aquaporin Z; Provisio 100.0 2.1E-46 4.5E-51 317.4 23.9 215 17-238 2-230 (231)
13 PLN00183 putative aquaporin NI 100.0 1.1E-44 2.3E-49 312.6 22.4 224 11-242 39-262 (274)
14 cd00333 MIP Major intrinsic pr 100.0 2.9E-43 6.2E-48 298.6 19.9 213 18-234 1-228 (228)
15 TIGR00861 MIP MIP family chann 100.0 4.1E-42 9E-47 289.3 19.2 210 22-231 1-216 (216)
16 PLN00184 aquaporin NIP1; Provi 99.6 2.4E-16 5.2E-21 137.7 7.0 104 135-238 50-157 (296)
17 PLN00182 putative aquaporin NI 99.6 9.4E-16 2E-20 133.2 10.5 99 14-123 156-254 (283)
18 PLN00026 aquaporin NIP; Provi 99.6 2.8E-16 6E-21 137.1 7.1 106 133-238 65-174 (298)
19 PLN00183 putative aquaporin NI 99.6 1.5E-15 3.2E-20 131.5 10.1 112 15-137 159-270 (274)
20 cd00333 MIP Major intrinsic pr 99.6 1.7E-15 3.6E-20 128.6 10.0 101 12-120 125-227 (228)
21 PLN00167 aquaporin TIP5; Provi 99.5 1.4E-14 3E-19 124.5 8.1 102 136-237 19-129 (256)
22 TIGR00861 MIP MIP family chann 99.5 1.9E-14 4.1E-19 121.2 8.2 97 13-117 118-215 (216)
23 KOG0223 Aquaporin (major intri 99.5 8.8E-15 1.9E-19 123.7 5.7 108 6-125 121-228 (238)
24 PLN00166 aquaporin TIP2; Provi 99.5 1.4E-14 3.1E-19 124.1 6.7 102 136-237 15-125 (250)
25 PRK05420 aquaporin Z; Provisio 99.5 3.9E-14 8.5E-19 120.2 6.9 99 139-237 2-105 (231)
26 PTZ00016 aquaglyceroporin; Pro 99.5 2.7E-14 5.8E-19 125.1 5.8 101 137-237 48-152 (294)
27 COG0580 GlpF Glycerol uptake f 99.4 1.7E-13 3.6E-18 115.8 4.2 107 137-243 3-116 (241)
28 PLN00027 aquaporin TIP; Provis 99.4 4E-12 8.7E-17 109.3 12.5 104 12-124 137-240 (252)
29 KOG0224 Aquaporin (major intri 99.4 1.3E-13 2.7E-18 118.1 2.7 104 137-240 30-138 (316)
30 PF00230 MIP: Major intrinsic 99.3 2.7E-11 5.9E-16 102.6 10.0 101 9-118 127-227 (227)
31 PRK11562 nitrite transporter N 92.4 4.3 9.4E-05 35.3 12.7 178 56-243 59-257 (268)
32 PRK09713 focB putative formate 87.7 19 0.0004 31.6 13.0 102 55-159 67-181 (282)
33 PRK10805 formate transporter; 85.7 24 0.00052 31.0 15.3 100 56-159 69-182 (285)
34 COG2116 FocA Formate/nitrite f 85.1 25 0.00054 30.6 16.9 180 54-241 63-263 (265)
35 PF01226 Form_Nir_trans: Forma 73.2 59 0.0013 27.9 11.2 142 14-159 18-171 (250)
36 PF03033 Glyco_transf_28: Glyc 43.7 7.6 0.00016 29.3 -0.0 18 77-94 8-25 (139)
37 PRK12446 undecaprenyldiphospho 34.0 18 0.00039 32.6 0.8 20 74-93 8-27 (352)
38 PF09163 Form-deh_trans: Forma 20.9 1.3E+02 0.0028 18.6 2.7 24 221-244 20-43 (44)
39 KOG1330 Sugar transporter/spin 20.3 1E+02 0.0023 29.2 3.1 30 210-239 185-214 (493)
40 PRK11375 allantoin permease; P 20.1 7.4E+02 0.016 23.3 9.1 22 216-237 450-471 (484)
No 1
>KOG0223 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3e-53 Score=356.86 Aligned_cols=230 Identities=52% Similarity=0.887 Sum_probs=209.4
Q ss_pred cCCcCChhhHHHHHHHHHHHHHHHHHHHHHhhhhcccccCcCCCCCchHHHHHHHHHHHHHHHHHHhcCCCcccchHHHH
Q 025817 8 FDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTF 87 (247)
Q Consensus 8 ~~~~~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSGah~NPavTl 87 (247)
..+..+++.+|++++||++|++++|++|++...+.+ ...+.+.+.+++.+|+++++.+++++++||||+|||||+
T Consensus 2 ~~~~~~~~~~~~~~aEF~~T~~~vf~g~~~~~~~~~-----~~~~~~l~~ial~~Gl~v~v~i~~~g~iSGaH~NPAVT~ 76 (238)
T KOG0223|consen 2 SGELLSVSFLRALIAEFLATFLFVFAGCGSVVVNPK-----YGGPVGLLGIALAFGLAVFVLVYSTGHISGAHFNPAVTL 76 (238)
T ss_pred ccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhccc-----cCCCchhHHHHHHHHHHHHHHHhhhccccccccCHHHHH
Confidence 456778999999999999999999999998876543 234567889999999999999999999999999999999
Q ss_pred HHHHhCCCCcchhHHHHHHHhHHHHHHHHHHHHHhcCC----cCcccccCCCCchhHHHHHHHHHHHHHHHHHHhhccCC
Q 025817 88 GLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGL----AVPTHNVAAGVGAIEGVVMEIIITFGLVYTVYATAADP 163 (247)
Q Consensus 88 ~~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~E~~~T~~l~~~il~~~~~~ 163 (247)
++++.|++++.++..|+++|++|+++|+.+++.+.+.+ ......+.++.+..|+++.|++.||.|+++++++..|+
T Consensus 77 a~~~~~~isl~~~~~Y~vaQ~lGa~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~E~ilTf~Lv~~v~~~a~d~ 156 (238)
T KOG0223|consen 77 AFAVGGKISLFRAVAYIVAQLLGAIAGAALLKVVTPGQYNRKGLGLTGLAPGLSTGQGLVIEIILTFILVFTVFATATDP 156 (238)
T ss_pred HHHHhCCCcHHHhHHHHHHHHHHHHHHHHHHheecCcccccCCcceeccCCCCCcchhHHHHHHHHHHHhheeEEEeecC
Confidence 99999999999999999999999999999999988763 34556678889999999999999999999999977888
Q ss_pred CCCCCCChhHHHHHHHHHHHHHhhcCCCCCccCchhhhhhhcCcCCCCceeeeecccchHHHHHHHHHHHhhcCCCCCCC
Q 025817 164 KKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWVGPLIGGGLAGLIYGNVFMHSEHAPL 243 (247)
Q Consensus 164 ~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~~~~~~~~~wvy~iap~~Ga~~a~~~~~~~~~~~~~~~~ 243 (247)
|+. .+.|+.||+++.+.+++++++||++|||||+|||++..++|+++|+||++|++|+++++++|+.++.+..+++.
T Consensus 157 ~~~---~~a~l~IG~~v~~~~l~~g~~TG~sMNPArSfGpAvv~~~w~~hwiYwvgP~~Ga~~a~~~y~~v~~~~~~~~~ 233 (238)
T KOG0223|consen 157 RRS---ELAPLAIGFSVGLNILAAGPFTGASMNPARSFGPAVVYGSWDDHWIYWVGPLLGAILAALIYRLVFIPDESEPT 233 (238)
T ss_pred CCc---ccHHHHHHHHHHHHHHeecCcCcCccCcHHHhhHHHHhcCCCcEEEEEhhHHHHHHHHHHHHHHhccCcccccc
Confidence 864 68999999999999999999999999999999999999999999999999999999999999999998855555
Q ss_pred CC
Q 025817 244 SN 245 (247)
Q Consensus 244 ~~ 245 (247)
++
T Consensus 234 ~~ 235 (238)
T KOG0223|consen 234 KS 235 (238)
T ss_pred Cc
Confidence 44
No 2
>PLN00166 aquaporin TIP2; Provisional
Probab=100.00 E-value=6.6e-51 Score=347.97 Aligned_cols=242 Identities=78% Similarity=1.267 Sum_probs=202.2
Q ss_pred cccCCcCChhhHHHHHHHHHHHHHHHHHHHHHhhhhcccccCcCCCCCchHHHHHHHHHHHHHHHHHHhcCCCcccchHH
Q 025817 6 GRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAV 85 (247)
Q Consensus 6 g~~~~~~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSGah~NPav 85 (247)
...+|..+.+.+|++++||+|||+++|.++++........++....+.+++.+++++|+.+++.+++++++||+|+|||+
T Consensus 7 ~~~~~~~~~~~~~~~~aEfigTf~lv~~g~g~~~~~~~~~~~~~~~~~~~~~ial~~Gl~v~~~i~~~g~iSGah~NPAv 86 (250)
T PLN00166 7 GSLGDSFSVASLKAYLSEFIATLLFVFAGVGSAIAFAKLTSDAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAV 86 (250)
T ss_pred CchHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCccHHHHHHHHHHHHHHHHHHhcccccccCHHH
Confidence 34455557888999999999999999999998754222111111123356788999999999999999999999999999
Q ss_pred HHHHHHhCCCCcchhHHHHHHHhHHHHHHHHHHHHHhcCCcCcccccCCCCchhHHHHHHHHHHHHHHHHHHhhccCCCC
Q 025817 86 TFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNVAAGVGAIEGVVMEIIITFGLVYTVYATAADPKK 165 (247)
Q Consensus 86 Tl~~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~l~~~il~~~~~~~~ 165 (247)
|+++++.|+++|.+.+.|+++|++|+++|+.+++.+.+++..+.....++.+..++++.|+++|++|+++++.++.|+++
T Consensus 87 t~~~~l~g~~~~~~~~~y~~aq~lGa~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~v~Tf~Lv~~i~~~~~~~~~ 166 (250)
T PLN00166 87 TLGLAIGGNITIITGFFYWIAQCLGSIVACLLLVFVTNGESVPTHGVAAGLGAIEGVVMEIVVTFALVYTVYATAADPKK 166 (250)
T ss_pred HHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcccccCCCCcHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 99999999999999999999999999999999988876533333334456788999999999999999999988666654
Q ss_pred CCCCChhHHHHHHHHHHHHHhhcCCCCCccCchhhhhhhcCcCCCCceeeeecccchHHHHHHHHHHHhhc-CCCCCCCC
Q 025817 166 GSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWVGPLIGGGLAGLIYGNVFM-HSEHAPLS 244 (247)
Q Consensus 166 ~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~~~~~~~~~wvy~iap~~Ga~~a~~~~~~~~~-~~~~~~~~ 244 (247)
...+.+.|+.+|+.+...++..+++||+++||||+|||+++.++|+++|+||++|++|+++++++|+.++. +..+.|.|
T Consensus 167 ~~~~~~~p~~iGl~v~~~~~~~~~~tG~~~NPAR~~gPal~~~~~~~~wvywvgPi~Ga~~aa~~y~~l~~~~~~~~~~~ 246 (250)
T PLN00166 167 GSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGDFSQIWIYWVGPLVGGALAGLIYGDVFIGSYAAAPTS 246 (250)
T ss_pred cccccchhHHHHHHHHHHHHcccCCCCCccCchHhhHHHHhcCCCcccchhhHHHHHHHHHHHHHHHHHhcccCCCCCCC
Confidence 33345789999999999999999999999999999999999989999999999999999999999988855 45555666
Q ss_pred CCC
Q 025817 245 NDY 247 (247)
Q Consensus 245 ~~~ 247 (247)
|||
T Consensus 247 ~~~ 249 (250)
T PLN00166 247 EDY 249 (250)
T ss_pred ccc
Confidence 687
No 3
>PLN00027 aquaporin TIP; Provisional
Probab=100.00 E-value=1.2e-50 Score=347.41 Aligned_cols=243 Identities=63% Similarity=1.079 Sum_probs=204.5
Q ss_pred ccccCCcCChhhHHHHHHHHHHHHHHHHHHHHHhhhhcccccCcCCCCCchHHHHHHHHHHHHHHHHHHhcCCCcccchH
Q 025817 5 FGRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPA 84 (247)
Q Consensus 5 ~g~~~~~~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSGah~NPa 84 (247)
.+..+|...++.+|++++||+||++|++.++++........++....+.+++.+++++|+++.+.+++++++||+|+|||
T Consensus 8 ~~~~~~~~~~~~~~~~~aEfigTf~lv~~g~g~~~~~~~~~~~~~~~~~~~l~~~l~~Gl~v~~~i~~~~~iSGah~NPA 87 (252)
T PLN00027 8 IGTPGEASHPDALKAALAEFISTLIFVFAGEGSGMAFNKLTDNGSTTPAGLVAAALAHAFALFVAVSVGANISGGHVNPA 87 (252)
T ss_pred CCchHhhhcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCcchHHHHHHHHHHHHHHHHHHcccCccccChH
Confidence 34455555688899999999999999999998865322211111112345678899999999999999999999999999
Q ss_pred HHHHHHHhCCCCcchhHHHHHHHhHHHHHHHHHHHHHhcCCcCcccccCCCCchhHHHHHHHHHHHHHHHHHHhhccCCC
Q 025817 85 VTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNVAAGVGAIEGVVMEIIITFGLVYTVYATAADPK 164 (247)
Q Consensus 85 vTl~~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~l~~~il~~~~~~~ 164 (247)
+|+++++.|+++|.+.+.|+++|++|+++|+.+++...++.....+...++.+..++++.|+++|++|+++++.+..|++
T Consensus 88 vtl~~~~~g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~i~Tf~Lv~~i~~~~~~~~ 167 (252)
T PLN00027 88 VTFGAFIGGNITLLRGILYWIAQLLGSVVACLLLKFSTGGLETSAFSLSSGVGVWNAFVFEIVMTFGLVYTVYATAVDPK 167 (252)
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCCccHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 99999999999999999999999999999999988877654445566667788999999999999999999998766666
Q ss_pred CCCCCChhHHHHHHHHHHHHHhhcCCCCCccCchhhhhhhcCcCCCCceeeeecccchHHHHHHHHHHHhhcCCC-CCCC
Q 025817 165 KGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWVGPLIGGGLAGLIYGNVFMHSE-HAPL 243 (247)
Q Consensus 165 ~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~~~~~~~~~wvy~iap~~Ga~~a~~~~~~~~~~~~-~~~~ 243 (247)
+...+.+.|+.+|+.+...+++.+++||++|||||||||+++.++|+++|+||++|++|+++++++|++++.+++ +++.
T Consensus 168 ~~~~~~~~p~~iGl~v~~~~~~~g~~TG~~~NPAR~~gPal~~~~~~~~wvy~vgP~~Ga~laa~~y~~l~~~~~~~~~~ 247 (252)
T PLN00027 168 KGDLGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWTNHWVYWAGPLIGGGIAGLVYELIFIGSTTHEQL 247 (252)
T ss_pred cCCccchHHHHHHHHHHHHHHhcccccccccCcchhHHHHHHhhcchhhhHHHHHHHHHHHHHHHHHHHHhcCCcccccc
Confidence 543345789999999999999999999999999999999999989999999999999999999999999986533 3333
Q ss_pred CC-CC
Q 025817 244 SN-DY 247 (247)
Q Consensus 244 ~~-~~ 247 (247)
++ ||
T Consensus 248 ~~~~~ 252 (252)
T PLN00027 248 PTTDY 252 (252)
T ss_pred CCCCC
Confidence 44 76
No 4
>PLN00184 aquaporin NIP1; Provisional
Probab=100.00 E-value=2.6e-49 Score=344.39 Aligned_cols=225 Identities=32% Similarity=0.485 Sum_probs=190.9
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHhhhhcccccCcCCCCCchHHHHHHHHHHHHHHHHHHhcCCCcccchHHHHHHHH
Q 025817 12 FSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLAL 91 (247)
Q Consensus 12 ~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSGah~NPavTl~~~l 91 (247)
.+.+++|++++||+|||+|+|+++++....... + ...++..+++++|+++++.+++++++||+|+|||||+++++
T Consensus 49 ~~~~~~~~~~aEfiGTflLvf~g~g~~~~~~~~--~---~~~~~~~iai~~Gl~v~~~i~~~g~iSGaH~NPAVTla~al 123 (296)
T PLN00184 49 VSVPFLQKLIAEVLGTYFLVFTGCASVVVNMQN--D---NVVTLPGIAIVWGLTIMVLIYSLGHISGAHINPAVTIAFAS 123 (296)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHhhcccC--C---CccccHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHH
Confidence 455678999999999999999999877542211 1 12356788999999999999999999999999999999999
Q ss_pred hCCCCcchhHHHHHHHhHHHHHHHHHHHHHhcCCcC-------cccccCCCCchhHHHHHHHHHHHHHHHHHHhhccCCC
Q 025817 92 GGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAV-------PTHNVAAGVGAIEGVVMEIIITFGLVYTVYATAADPK 164 (247)
Q Consensus 92 ~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~E~~~T~~l~~~il~~~~~~~ 164 (247)
.|+++|.+.+.|+++|++|+++|+++++.+++.... ..+...+..+..++++.|+++|++|+++++++..+++
T Consensus 124 ~g~~~~~~~~~YiiaQllGA~lga~~~~~l~~~~~~~~~~~~~~~~~t~p~~s~~~af~~E~i~TfvLv~~il~~~~~~~ 203 (296)
T PLN00184 124 CGRFPLKQVPAYVISQVIGSTLAAATLRLLFGLDHDVCSGKHDVFIGSSPVGSDLQAFVMEFIVTFYLMFIISGVATDNR 203 (296)
T ss_pred hCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhccccccceeeccCcCCcHHHHHHHHHHHHHHHHHHHHheeccCc
Confidence 999999999999999999999999999888752110 1122334457889999999999999999998855544
Q ss_pred CCCCCChhHHHHHHHHHHHHHhhcCCCCCccCchhhhhhhcCcCCCCceeeeecccchHHHHHHHHHHHhhcCCCCCCC
Q 025817 165 KGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWVGPLIGGGLAGLIYGNVFMHSEHAPL 243 (247)
Q Consensus 165 ~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~~~~~~~~~wvy~iap~~Ga~~a~~~~~~~~~~~~~~~~ 243 (247)
. .+...|+.||+++.+.+++.+++||++|||||||||+++.+.|+++||||++|++|+++++++|++++.++.+.++
T Consensus 204 ~--~~~~~~l~IG~~v~~~~~~~g~~TG~smNPAR~~GPal~~~~~~~~WVy~vgPilGa~laal~y~~l~~~~~~~~~ 280 (296)
T PLN00184 204 A--IGELAGLAIGSTVLLNVLIAAPVSSASMNPGRSLGPAMVYGCYKGIWIYIVAPTLGAIAGAWVYNTVRYTDKPLRE 280 (296)
T ss_pred C--CCcchHHHHHHHHHHHHHHhcccCccccCchhhHHHHHHhhcccccchHHhHHHHHHHHHHHHHHHHhcCCCcchh
Confidence 2 3457899999999999999999999999999999999998899999999999999999999999999876655443
No 5
>PLN00167 aquaporin TIP5; Provisional
Probab=100.00 E-value=1.9e-48 Score=333.66 Aligned_cols=237 Identities=55% Similarity=0.965 Sum_probs=198.6
Q ss_pred cccCCcCChhhHHHHHHHHHHHHHHHHHHHHHhhhhcccccCcCCCCCchHHHHHHHHHHHHHHHHHHhcCCCcccchHH
Q 025817 6 GRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAV 85 (247)
Q Consensus 6 g~~~~~~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSGah~NPav 85 (247)
.+.++..+++.+|++++||+|||+++|+++++........++....+.+++.+++.+|+++.+.+++++++||+|+|||+
T Consensus 11 ~~~~~~~~~~~~~~~laEflgTf~lv~~~~g~~~~~~~~~~~~~~~~~~~~~i~l~~Gl~v~~~i~~~g~iSGah~NPAv 90 (256)
T PLN00167 11 ARFQQSVTRNALRSYLAEFISTFFFVFAAVGSAMSSRKLMPDAASDPSSLLIVAIANAFALSSAVYIAANISGGHVNPAV 90 (256)
T ss_pred CchhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccCCCCcchHHHHHHHHHHHHHHHHhhcccccccCHHH
Confidence 34566678889999999999999999999998764322111111123457889999999999999999999999999999
Q ss_pred HHHHHHhCCCCcchhHHHHHHHhHHHHHHHHHHHHHhcCCcCcccccCCCCchhHHHHHHHHHHHHHHHHHHhhccCCCC
Q 025817 86 TFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNVAAGVGAIEGVVMEIIITFGLVYTVYATAADPKK 165 (247)
Q Consensus 86 Tl~~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~l~~~il~~~~~~~~ 165 (247)
|++.++.|+++|++.+.|+++|++|+++|+.+++.++++...+.....++.+..++++.|+++|++|+++++.. .|+++
T Consensus 91 tl~~~~~g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~i~T~~L~~~i~~~-~~~~~ 169 (256)
T PLN00167 91 TFGMAVGGHISVPTAMFYWISQMLASVMACLFLKVTTVGQHVPTYKIAEEMTGFGASVLEGVLTFGLVYTVYAA-GDPRR 169 (256)
T ss_pred HHHHHHhCCCcHhhhhHHHHHHHHHHHHHHHHHHHhhccccccccccCcccchHHHHHHHHHHHHHHHHHHHHh-ccccc
Confidence 99999999999999999999999999999999888765432233333345577889999999999999999987 45544
Q ss_pred CCCCChhHHHHHHHHHHHHHhhcCCCCCccCchhhhhhhcCcCCCCceeeeecccchHHHHHHHHHHHhhcCCCCCCC
Q 025817 166 GSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWVGPLIGGGLAGLIYGNVFMHSEHAPL 243 (247)
Q Consensus 166 ~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~~~~~~~~~wvy~iap~~Ga~~a~~~~~~~~~~~~~~~~ 243 (247)
...+...|+.+|+.+....++.+++||+++||||||||+++.++|+++|+||++|++|+++++++|++++.|..++.-
T Consensus 170 ~~~~~~~pl~iGl~v~~~~~~~g~~TG~a~NPAR~~gPal~~~~~~~~wvywvgP~~Ga~l~a~~y~~l~~~~~~~~~ 247 (256)
T PLN00167 170 GLLGAIGPLAIGLVAGANVLAAGPFSGGSMNPACAFGSAVVAGSFKNQAVYWVGPLLGGAVAGLLYDNVVFPTQDDRG 247 (256)
T ss_pred cCCCCcchHHHHHHHHHHHHhccCCCCcccCcccchHHHHhccCccCcEEEeHHHHHHHHHHHHHHHHHhCCCcCCCC
Confidence 334457899999999999999999999999999999999998899999999999999999999999999876665543
No 6
>PLN00026 aquaporin NIP; Provisional
Probab=100.00 E-value=2.9e-48 Score=337.16 Aligned_cols=224 Identities=35% Similarity=0.531 Sum_probs=190.2
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHhhhhcccccCcCCCCCchHHHHHHHHHHHHHHHHHHhcCCCcccchHHHHHHHHh
Q 025817 13 SLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALG 92 (247)
Q Consensus 13 ~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSGah~NPavTl~~~l~ 92 (247)
+.+.+|++++||+|||+|+|+++++........ ...+++.+++++|+++++.+++++++||||+|||||+++++.
T Consensus 67 ~~~~~r~~laEfiGTflLvf~g~~~~~~~~~~~-----~~~~~~~ial~~GlaV~~~i~~~g~ISGaHlNPAVTla~al~ 141 (298)
T PLN00026 67 DVSLTRKLGAEFVGTFILIFAATAGPIVNQKYD-----GAETLIGNAACAGLAVMIVILSTGHISGAHLNPSLTIAFAAL 141 (298)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHhccccC-----CccchHHHHHHHHHHHHHHHHHhhccCccccCHHHHHHHHHh
Confidence 456789999999999999999997654322111 113566788999999999999999999999999999999999
Q ss_pred CCCCcchhHHHHHHHhHHHHHHHHHHHHHhcCCcCcccccCCCCchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCChh
Q 025817 93 GQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNVAAGVGAIEGVVMEIIITFGLVYTVYATAADPKKGSLGTIA 172 (247)
Q Consensus 93 g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~l~~~il~~~~~~~~~~~~~~~ 172 (247)
++++|++.+.|+++|++|+++|+++++.++++..... ...++.+..++++.|+++|++|+++++++..|+++ .+...
T Consensus 142 g~~~~~~~~~YiiaQilGAi~aa~~~~~~~~~~~~~g-~t~p~~s~~~a~~~Efi~TfiLv~vi~~v~~~~~~--~~~~~ 218 (298)
T PLN00026 142 RHFPWKHVPAYIAAQVSASICASFALKGVFHPFMSGG-VTVPSVSTGQAFALEFIITFNLLFVVTAVATDTRA--VGELA 218 (298)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCc-eeeecccHHHHHHHHHHHHHHHHHhheeeecCCCC--cCCcc
Confidence 9999999999999999999999999998886422211 12345688999999999999999999977555443 23467
Q ss_pred HHHHHHHHHHHHHhhcCCCCCccCchhhhhhhcCcCCCCceeeeecccchHHHHHHHHHHHhhcCCCCCCCC
Q 025817 173 PIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWVGPLIGGGLAGLIYGNVFMHSEHAPLS 244 (247)
Q Consensus 173 ~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~~~~~~~~~wvy~iap~~Ga~~a~~~~~~~~~~~~~~~~~ 244 (247)
++.+|+++...+++.+++||++|||||||+|++..++|+++|+||++|++|+++++++|+.+..+++++..+
T Consensus 219 ~l~iGl~V~~~~l~~g~~TGa~mNPARtlgPal~~~~~~~~wVy~vaPilGAilga~ly~~~~~~~~~~~~~ 290 (298)
T PLN00026 219 GIAVGATVMLNILVAGPSTGGSMNPVRTLGPAVAAGNYRAIWIYLVAPTLGALAGAGTYTAVKLREEDGDPP 290 (298)
T ss_pred chHHHHHHHHHHHHhcccCccccChHHHHHHHHhcCCchheeHHHHHHHHHHHHHHHHHHHHhCccccccCh
Confidence 899999999999999999999999999999999988999999999999999999999999997766665544
No 7
>KOG0224 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1e-49 Score=337.84 Aligned_cols=228 Identities=26% Similarity=0.388 Sum_probs=197.7
Q ss_pred cCChhhHHHHHHHHHHHHHHHHHHHHHhhhhcccccCcCCCCCchHHHHHHHHHHHHHHHHHHhcCCCcccchHHHHHHH
Q 025817 11 SFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLA 90 (247)
Q Consensus 11 ~~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSGah~NPavTl~~~ 90 (247)
..++++.|++++||+||++|++++++++.+.... + ...++++.+.++||+++++.+++.+++||||+|||||++++
T Consensus 26 ~i~~~l~Re~LAEFlGT~vL~~~G~g~v~Q~vls-~---g~~g~~~~vnlgwg~av~~gVyvag~iSGgHlNPAVS~a~~ 101 (316)
T KOG0224|consen 26 HIRNELLREFLAEFLGTFVLVVFGLGSVAQAVLS-G---GTGGSFIGVNLGWGFAVMMGVYVAGRISGGHLNPAVSLAMC 101 (316)
T ss_pred HHHHHHHHHHHHHHHhHHHHHhhccceeEEEEec-c---CCCCceEEEEehHhHHHHHHHHhhccccccccCHHHHHHHH
Confidence 3477889999999999999999999998654332 2 13466778889999999999999999999999999999999
Q ss_pred HhCCCCcchhHHHHHHHhHHHHHHHHHHHHHhcC--------C--------cCccc--ccCCCCchhHHHHHHHHHHHHH
Q 025817 91 LGGQITILTGIFYWIAQLLGSIVASFLLKVVTGG--------L--------AVPTH--NVAAGVGAIEGVVMEIIITFGL 152 (247)
Q Consensus 91 l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~--------~--------~~~~~--~~~~~~~~~~~~~~E~~~T~~l 152 (247)
+.||++|+|.++|+++|++||++|++.+|.++.+ + +..++ .|.|.++.+++|+.|+++|.+|
T Consensus 102 ~~g~~p~~k~p~Y~~aQ~iGAF~gaa~~y~~y~d~i~~f~Gg~~~vtgp~aTAgiFaTyP~p~ls~~n~F~DqfigTa~L 181 (316)
T KOG0224|consen 102 ILGRLPWKKFPVYVLAQFIGAFLGAATVYGLYYDAINEFDGGNRTVTGPKATAGIFATYPAPHLSLWNGFFDQFIGTAML 181 (316)
T ss_pred HhcCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEecCCccceEEEeecCchHhhhhHHHHHHHHHHHHH
Confidence 9999999999999999999999999998876641 1 11233 3667889999999999999999
Q ss_pred HHHHHhhccCCCCCCCCChhHHHHHHHHHHHHHhhcCCCCCccCchhhhhhhcCcC-----------CCCceeeeecccc
Q 025817 153 VYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASG-----------NFQDNWIYWVGPL 221 (247)
Q Consensus 153 ~~~il~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~~~~-----------~~~~~wvy~iap~ 221 (247)
+..++++ .|+|+..++.+.|+.+|+.+.++..+.+.++|..+|||||||||++.. .-.+.|++|++|+
T Consensus 182 ~~~l~aI-~D~rN~~p~g~~p~~iG~lv~~Ig~s~G~N~GyaiNPARDlgPRlF~~~aGyG~~vF~~~~~~~WvPivgPl 260 (316)
T KOG0224|consen 182 VLCLFAI-TDKRNPIPTGLHPLVIGILVVAIGMSLGYNTGYAINPARDLGPRLFTSIAGYGPEVFSAGHNWWWVPIVGPL 260 (316)
T ss_pred HhheeEE-ecCCCCCCcchhHHHHHHHHHHHHHHhhcccCcccCcccccchHHHHHHHhcchhhcccCCceeeeeehhhh
Confidence 9999998 678877777899999999999999999999999999999999999832 1157899999999
Q ss_pred hHHHHHHHHHHHhhcCCCCCCC
Q 025817 222 IGGGLAGLIYGNVFMHSEHAPL 243 (247)
Q Consensus 222 ~Ga~~a~~~~~~~~~~~~~~~~ 243 (247)
+|+++++++|++++..+.++++
T Consensus 261 ~Gai~G~~iY~~~Ig~h~~~~~ 282 (316)
T KOG0224|consen 261 IGAILGGWIYDFFIGFHIPREP 282 (316)
T ss_pred hhhhhhhhhheeeeeccCCCCC
Confidence 9999999999999887766443
No 8
>PF00230 MIP: Major intrinsic protein; InterPro: IPR000425 A number of transmembrane (TM) channel proteins can be grouped together on the basis of sequence similarities [, , , , ]. These include: Mammalian major intrinsic protein (MIP). MIP is the major component of lens fibre gap junctions. Mammalian aquaporins []. These proteins form water- specific channels that provide the plasma membranes of red cells and kidney prox imal and collecting tubules with high permeability to water, thereby permitting water to move in the direction of an osmotic gradient. Soybean nodulin-26, a major component of the peribacteroid membrane induced during nodulation in legume roots after Rhizobium infection. Plants tonoplast intrinsic proteins (TIP). There are various isoforms of TIP : alpha (seed), gamma, Rt (root), and Wsi (water-stress induced). These proteins may allow the diffusion of water, amino acids and/or peptides from the tonoplas t interior to the cytoplasm. Bacterial glycerol facilitator protein (gene glpF), which facilitates the mo vement of glycerol across the cytoplasmic membrane. Salmonella typhimurium propanediol diffusion fac ilitator (gene pduF). Yeast FPS1, a glycerol uptake/efflux facilitator protein. Drosophila neurogenic protein 'big brain' (bib). This protein may mediate in tercellular communication; it may functions by allowing the transport of certain molecules(s) and thereby sending a signal for an exodermal cell to become an ep idermoblast instead of a neuroblast. Yeast hypothetical protein YFL054c. A hypothetical protein from the pepX region of Lactococcus lactis. The structures of various members of the MIP family have been determined by means of X-ray diffraction [, , ], revealing the fold to comprise a right-handed bundle of 6 transmembrane (TM) alpha-helices [, , ]. Similarities in the N-and C-terminal halves of the molecule suggest that the proteins may have arisen through tandem, intragenic duplication of an ancestral protein that contained 3 TM domains []. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins []. Aquaporin-CHIP (Aquaporin 1) belongs to the Colton blood group system and is associated with Co(a/b) antigen.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3NE2_A 2C32_A 1YMG_A 2B6P_A 3C02_A 2B5F_D 3CN6_A 3CN5_A 1Z98_M 3CLL_A ....
Probab=100.00 E-value=1.3e-48 Score=331.20 Aligned_cols=222 Identities=41% Similarity=0.665 Sum_probs=191.3
Q ss_pred CcCChhhHHHHHHHHHHHHHHHHHHHHHhhhhcccccC-cCCCCCchHHHHHHHHHHHHHHHHHHhcCCCcccchHHHHH
Q 025817 10 DSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTAD-AALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFG 88 (247)
Q Consensus 10 ~~~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSGah~NPavTl~ 88 (247)
|.++++++|++++||+||++++|+++++.........+ +.+...++..+++++|+++.+.++.++++||+|+|||||++
T Consensus 1 ~~~~~~~~r~~~aEfigT~~lvf~~~~~~~~~~~~~~~~~~~~~~~~~~ial~~g~~~~~~i~~~~~iSGaH~NPaVTla 80 (227)
T PF00230_consen 1 ELKSPSLWRKFLAEFIGTFLLVFFGCGSVAALNGSTSSSGSDVSGGWLQIALAWGLALAALIYAFGPISGAHFNPAVTLA 80 (227)
T ss_dssp GCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSTTSTTSSHHHHHHHHHHHHHHHHHHHHHHHHHTSS-SHHHHHH
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccHHHHHHHHHHhhhhhhhhhhhccccccccchhhh
Confidence 46788999999999999999999999876543333221 11222467889999999999999999999999999999999
Q ss_pred HHHhCCCCcchhHHHHHHHhHHHHHHHHHHHHHhcCC--cC--cccccCCCCchhHHHHHHHHHHHHHHHHHHhhccCCC
Q 025817 89 LALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGL--AV--PTHNVAAGVGAIEGVVMEIIITFGLVYTVYATAADPK 164 (247)
Q Consensus 89 ~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~E~~~T~~l~~~il~~~~~~~ 164 (247)
.++.|+++|++.+.|+++|++|+++|+.+.+.++++. .. ....+.++.+..++++.|+++|++|+++++.+.++++
T Consensus 81 ~~l~g~~~~~~~~~Yi~aQ~lGa~~g~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~~~t~il~~~i~~~~~~~~ 160 (227)
T PF00230_consen 81 FALTGRISWKKAIVYIIAQFLGAFLGALLVYALYPDSNSAAGIFATTPPPGISLGQAFFSEFIGTFILVLVILAVADDKR 160 (227)
T ss_dssp HHHTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHSTHHHTCTTTTSCGSTTTSSHHHHHHHHHHHHHHHHHHHHHHTSTTS
T ss_pred eeeeeeecccceeeEEeeccccccccccchhhcccCcccccccccccccccchhhhhhhhhhhhhhHHHhhhhhhccccc
Confidence 9999999999999999999999999999999888752 12 2334667789999999999999999999999876666
Q ss_pred CCCCCChhHHHHHHHHHHHHHhhcCCCCCccCchhhhhhhcCcCCCCceeeeecccchHHHHHHHHH
Q 025817 165 KGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWVGPLIGGGLAGLIY 231 (247)
Q Consensus 165 ~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~~~~~~~~~wvy~iap~~Ga~~a~~~~ 231 (247)
+...+.+.|+.+|+.+....+..++.||+++||||+|+|+++.+.|+++|+||++|++|+++++++|
T Consensus 161 ~~~~~~~~p~~ig~~v~~~~~~~~~~tG~~~NPAr~~g~~l~~~~~~~~wvy~~~P~~Ga~~a~~~Y 227 (227)
T PF00230_consen 161 KFPLGPLAPLAIGLTVGALVLAGGPYTGASLNPARALGPALFSGIWDYFWVYWVGPFIGAILAALLY 227 (227)
T ss_dssp SSTSSGGHHHHHHHHHHHHHHHHHHHHST-SSHHHHHHHHHHHTHHTTTTHHHHHHHHHHHHHHHHH
T ss_pred ccccccccceeEEEEEeecccccccccccccCchhhcCceeecccCCeEEEEEehHHHHHHHHHhhC
Confidence 5544557899999999999999999999999999999999999999999999999999999999987
No 9
>PLN00182 putative aquaporin NIP4; Provisional
Probab=100.00 E-value=3.6e-47 Score=329.08 Aligned_cols=216 Identities=31% Similarity=0.526 Sum_probs=186.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhcccccCcCCCCCchHHHHHHHHHHHHHHHHHHhcCCCcccchHHHHHHHHhCC
Q 025817 15 GSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQ 94 (247)
Q Consensus 15 ~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSGah~NPavTl~~~l~g~ 94 (247)
+.+|++++||+|||+|+|.++++...... .+ ...+...+++++|+++++.+++++++||+|+|||||+++++.|+
T Consensus 40 ~~~~~~~aEflgTflLvf~g~g~~~~~~~-~~----~~~~~~~iala~Gl~v~~~i~~~g~iSGah~NPAVTla~~~~~~ 114 (283)
T PLN00182 40 CLTQKLIAEMIGTYFIIFSGCGVVVVNVL-YG----GTITFPGICVTWGLIVMVMIYSTGHISGAHFNPAVTVTFAIFRR 114 (283)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhc-cC----CCcchHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHHcC
Confidence 56799999999999999999987654221 11 11346678899999999999999999999999999999999999
Q ss_pred CCcchhHHHHHHHhHHHHHHHHHHHHHhcCCcCcccccCCCCchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCChhHH
Q 025817 95 ITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNVAAGVGAIEGVVMEIIITFGLVYTVYATAADPKKGSLGTIAPI 174 (247)
Q Consensus 95 ~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~l~~~il~~~~~~~~~~~~~~~~~ 174 (247)
++|.+.+.|+++|++|+++|+++++.+++......+...+..+..++++.|+++|++|+++++++..+++. .+...++
T Consensus 115 ~~~~~~~~Yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~~p~~s~~~a~~~E~l~TfiLv~~i~~~~~~~~~--~~~~~~l 192 (283)
T PLN00182 115 FPWYQVPLYIGAQLTGSLLASLTLRLMFNVTPEAFFGTTPTDSSGQALVAEIIISFLLMFVISGVATDSRA--VGELAGI 192 (283)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccceeeCCCCcchHHHHHHHHHHHHHHHHHHHhheecccc--CCcchhH
Confidence 99999999999999999999999998885432334445556688899999999999999999987555442 3346799
Q ss_pred HHHHHHHHHHHhhcCCCCCccCchhhhhhhcCcCCCCceeeeecccchHHHHHHHHHHHhhcC
Q 025817 175 AIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWVGPLIGGGLAGLIYGNVFMH 237 (247)
Q Consensus 175 ~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~~~~~~~~~wvy~iap~~Ga~~a~~~~~~~~~~ 237 (247)
.+|+++.+.+++.+++||+++||||+|||+++.++|+++|+||++|++|+++++++|+++..+
T Consensus 193 ~iGl~V~~~~~~~g~~SGa~lNPARt~gpal~~~~~~~~wvY~vap~lGA~lgally~~l~~~ 255 (283)
T PLN00182 193 AVGMTIILNVFVAGPISGASMNPARSLGPAIVMGRYKGIWVYIVGPFVGIIAGGFVYNLIRFT 255 (283)
T ss_pred HHHHHHHHHHHHccccCccccChHHHHHHHHHhccccceeHHHHHHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999999999999999998899999999999999999999999999753
No 10
>PTZ00016 aquaglyceroporin; Provisional
Probab=100.00 E-value=5.7e-47 Score=330.54 Aligned_cols=220 Identities=28% Similarity=0.440 Sum_probs=185.7
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhhhcccccCcCCCCCchHHHHHHHHHHHHHHHHHHhcCCCcccchHHHHHHHHhC
Q 025817 14 LGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGG 93 (247)
Q Consensus 14 ~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSGah~NPavTl~~~l~g 93 (247)
++++|++++||+||++++|+++++...... .+ .+.+...+++++|+++.+.+++++++||+|+|||||+++++.|
T Consensus 47 ~~~~~~~laEfigT~llvf~g~g~~~~~~~-~~----~~~~~~~ial~~Glav~~~i~~~g~iSG~h~NPAVTla~~l~g 121 (294)
T PTZ00016 47 RPNVREYVAEFLGTFVLLFFGEGVVATTHT-VG----NNGDYLAITIGWGLGVTFGLLVSAGISGGHLNPAVTLGNAVFG 121 (294)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcccc-cC----CCCCcHHHHHHHHHHHHHHHHHhcccCcCccCHHHHHHHHHhc
Confidence 677899999999999999999987653211 11 1245668899999999999999999999999999999999999
Q ss_pred CCCcchhHHHHHHHhHHHHHHHHHHHHHhcCC-----------------cCcccccCCCCchhHHHHHHHHHHHHHHHHH
Q 025817 94 QITILTGIFYWIAQLLGSIVASFLLKVVTGGL-----------------AVPTHNVAAGVGAIEGVVMEIIITFGLVYTV 156 (247)
Q Consensus 94 ~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~E~~~T~~l~~~i 156 (247)
+++|.+.+.|+++|++|+++|+++++.++++. ....+.+.|+.+..++++.|+++|++|++++
T Consensus 122 ~i~~~~~~~YiiaQ~lGa~~ga~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t~p~~s~~~a~~~E~i~T~iLv~~i 201 (294)
T PTZ00016 122 KFPWKKLPGYFVAQLLGAFVGAACVYGLYYGFFKDHGIPELPWETMANGFAGVFATYPREGNFYAIFSELILTAILLLVI 201 (294)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhhcCcccccccccccccceeeCCCCccHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998876430 0112344556778899999999999999999
Q ss_pred HhhccCCCCCCCCChhHHHHHHHHHHHHHhhcCCCCCccCchhhhhhhcCc------CCCC----ceeeeecccchHHHH
Q 025817 157 YATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVAS------GNFQ----DNWIYWVGPLIGGGL 226 (247)
Q Consensus 157 l~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~~~------~~~~----~~wvy~iap~~Ga~~ 226 (247)
+.+ .|+++.......|+.+|+.+....++.+++||++||||||||||++. .+|+ ++|+||++|++|+++
T Consensus 202 la~-~d~~~~~~~~~~pl~IGl~v~~i~~~~g~~TG~smNPAR~fGPal~~~~~~g~~~~~~~~~~~WVy~vgP~vGa~~ 280 (294)
T PTZ00016 202 LAI-TDPNNCPAFNYLPVAVGLLVFVIGISFGGNTGYALNPARDLGPRLFSAILWGSEVFTKDNYYFWVPLVAPFVGAVL 280 (294)
T ss_pred HHh-ccCccCCCcCcccHHHHHHHHHHHHhccCCCCCcccchhhHHHHHHHHHhccccccCcCCceeeeeehHHHHHHHH
Confidence 988 45554333456899999999999999999999999999999999985 2454 689999999999999
Q ss_pred HHHHHHHhhcCCC
Q 025817 227 AGLIYGNVFMHSE 239 (247)
Q Consensus 227 a~~~~~~~~~~~~ 239 (247)
++++|++++.|..
T Consensus 281 aally~~ll~~~~ 293 (294)
T PTZ00016 281 GMFLYDKFIPPLI 293 (294)
T ss_pred HHHHHHHHhCCCC
Confidence 9999999976654
No 11
>COG0580 GlpF Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.3e-47 Score=319.35 Aligned_cols=219 Identities=33% Similarity=0.502 Sum_probs=186.3
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhhhcccccCcCCCCCchHHHHHHHHHHHHHHHHHHhcCCCcccchHHHHHHHHhC
Q 025817 14 LGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGG 93 (247)
Q Consensus 14 ~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSGah~NPavTl~~~l~g 93 (247)
.+..|++++||+||++|++.++++......... +....++..++++||+++.+.+|+++++||+|+|||||+++++.|
T Consensus 2 ~~~~~~~~aEflGT~~Li~~G~G~~a~~~l~~~--~~~~~~~~~i~~~wGl~V~~~iy~~g~iSGaHlNPAVTi~la~~g 79 (241)
T COG0580 2 TTLTKKLLAEFLGTFLLIFFGNGSVAAVALKGS--KALGGGWLGIALAWGLGVLVAIYAFGGISGAHLNPAVTIALAVRG 79 (241)
T ss_pred ccHHHHHHHHHHHHHHHHHhhccHHHHHHhccc--cccccceeehhHHHHHHHHHHHHhccCcCccccChHHHHHHHHhC
Confidence 356788999999999999999999876542221 234566778999999999999999999999999999999999999
Q ss_pred CCCcchhHHHHHHHhHHHHHHHHHHHHHhcCC----c------CcccccCCC-CchhHHHHHHHHHHHHHHHHHHhhccC
Q 025817 94 QITILTGIFYWIAQLLGSIVASFLLKVVTGGL----A------VPTHNVAAG-VGAIEGVVMEIIITFGLVYTVYATAAD 162 (247)
Q Consensus 94 ~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~----~------~~~~~~~~~-~~~~~~~~~E~~~T~~l~~~il~~~~~ 162 (247)
+++|++++.||++|++|+++|+.+++.++++. + ...+++.|. .+..++++.|+++|++|++.++++.+|
T Consensus 80 ~fp~~~v~~YivAQ~lGA~~ga~l~~~~~~~~~~~~~~~~~~~~g~~~t~p~~~~~~~~fl~E~v~T~~L~~~Ila~~~~ 159 (241)
T COG0580 80 RFPWRKVLPYIVAQVLGAFAGAALLYLLYYGKILETEGDPLASLGAFSTSPGGYSLGQAFLIEFVGTFVLVLGILALTDD 159 (241)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhcCCchhhccccccCCCcccHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 99999999999999999999999998887531 1 233444444 367899999999999999999998665
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHhhcCCCCCccCchhhhhhhcCcC---------CCCceeeeecccchHHHHHHHHHHH
Q 025817 163 PKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASG---------NFQDNWIYWVGPLIGGGLAGLIYGN 233 (247)
Q Consensus 163 ~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~~~~---------~~~~~wvy~iap~~Ga~~a~~~~~~ 233 (247)
++. .+.+.|+.+|+.+....++.++.||.++|||||+|||+... +++|+|+||++|++|+++++++|+.
T Consensus 160 ~~~--~~~~apl~iGllv~~i~~s~g~~TG~aiNPARdlGprl~~~~~g~~~~~g~~~y~wipvigpiiGa~lg~~~~~~ 237 (241)
T COG0580 160 GNA--NAGFAPLAIGLLVTAIGLSLGPTTGTAINPARDLGPRLAHSLAGWAANKGDSSYFWIPVIGPIVGAILGALLYKL 237 (241)
T ss_pred Ccc--cccchHHHHHHHHHHHHHHhcCCCCCccChHHHHHHHHHHHhcCcccCCCCCCeEeeeehHHHHHHHHHHHHHHH
Confidence 554 33489999999999999999999999999999999999421 3358999999999999999999998
Q ss_pred hhc
Q 025817 234 VFM 236 (247)
Q Consensus 234 ~~~ 236 (247)
++.
T Consensus 238 ~~~ 240 (241)
T COG0580 238 LLG 240 (241)
T ss_pred Hcc
Confidence 754
No 12
>PRK05420 aquaporin Z; Provisional
Probab=100.00 E-value=2.1e-46 Score=317.41 Aligned_cols=215 Identities=32% Similarity=0.559 Sum_probs=180.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhcccccCcCCCCCchHHHHHHHHHHHHHHHHHHhcCCCcccchHHHHHHHHhCCCC
Q 025817 17 FKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQIT 96 (247)
Q Consensus 17 ~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSGah~NPavTl~~~l~g~~~ 96 (247)
+|++++||+||++++|+++++........ .+..+.+.+++++|+++.+.+++++++||+|+|||||+++++.|+++
T Consensus 2 ~~~~laEfigT~~lv~~g~~~~~~~~~~~----~~~~~~~~ial~~Gl~v~~~i~~~g~iSG~h~NPAvtl~~~~~~~i~ 77 (231)
T PRK05420 2 FKKLAAEFFGTFWLVFGGCGSAVLAAAFP----ELGIGFLGVALAFGLTVLTMAYAVGHISGGHFNPAVSVGLWAGGRFP 77 (231)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHhhcccC----CCCCchHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHhCCCC
Confidence 68999999999999999998764322111 12234677899999999999999999999999999999999999999
Q ss_pred cchhHHHHHHHhHHHHHHHHHHHHHhcCCcC---c--cc------ccC-CCCchhHHHHHHHHHHHHHHHHHHhhccCCC
Q 025817 97 ILTGIFYWIAQLLGSIVASFLLKVVTGGLAV---P--TH------NVA-AGVGAIEGVVMEIIITFGLVYTVYATAADPK 164 (247)
Q Consensus 97 ~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~---~--~~------~~~-~~~~~~~~~~~E~~~T~~l~~~il~~~~~~~ 164 (247)
|++.+.|+++|++|+++|+.+++.++.+... . .+ ... ...+..++++.|+++|++|+++++.. .|++
T Consensus 78 ~~~~~~Y~~aQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~v~T~iLv~~i~~~-~~~~ 156 (231)
T PRK05420 78 AKELVPYIIAQVVGGIAAAAVLYLIASGKAGFDLAGSGFASNGYGEHSPGGYSLLAALVCEVVLTAFFLLVILGA-TDKR 156 (231)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHhCCccccccccccccccccccCCCCcccHHHHHHHHHHHHHHHHHHHHHH-hCCC
Confidence 9999999999999999999988877653211 0 01 011 23467899999999999999999987 4554
Q ss_pred CCCCCChhHHHHHHHHHHHHHhhcCCCCCccCchhhhhhhcCcCCC--CceeeeecccchHHHHHHHHHHHhhcCC
Q 025817 165 KGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNF--QDNWIYWVGPLIGGGLAGLIYGNVFMHS 238 (247)
Q Consensus 165 ~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~~~~~~--~~~wvy~iap~~Ga~~a~~~~~~~~~~~ 238 (247)
+ .+...|+.+|+.+....++.+++||++|||||||||+++.++| +++|+||++|++|+++++++|++++.++
T Consensus 157 ~--~~~~~p~~iGl~v~~~~~~~~~~TG~s~NPAR~~gpal~~g~~~~~~~wvy~vgP~~Ga~laa~~y~~l~~~~ 230 (231)
T PRK05420 157 A--PAGFAPIAIGLALTLIHLISIPVTNTSVNPARSTGVALFVGGWALEQLWLFWVAPIVGAIIGGLIYRLLLEKD 230 (231)
T ss_pred C--CCcchHHHHHHHHHHHHHHhhccCCCccCcHHHHHHHHHhCCCCccceEEeehHHHHHHHHHHHHHHHHhccC
Confidence 3 2347899999999999999999999999999999999997766 5899999999999999999999986544
No 13
>PLN00183 putative aquaporin NIP7; Provisional
Probab=100.00 E-value=1.1e-44 Score=312.63 Aligned_cols=224 Identities=31% Similarity=0.516 Sum_probs=189.7
Q ss_pred cCChhhHHHHHHHHHHHHHHHHHHHHHhhhhcccccCcCCCCCchHHHHHHHHHHHHHHHHHHhcCCCcccchHHHHHHH
Q 025817 11 SFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLA 90 (247)
Q Consensus 11 ~~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSGah~NPavTl~~~ 90 (247)
..+.+.+|++++||++||+++|+++++...... .. ...++...++.+|+++.+.+++++++||+|+|||+|++++
T Consensus 39 ~~~~~~~~~~laEfigTfllvf~~~g~~~~~~~-~~----~~~~~~~~al~~Gl~V~~~i~~~g~vSGah~NPAvTla~~ 113 (274)
T PLN00183 39 DMDLNPARMVLAEMVGTFILMFCVCGIIASTQL-SG----GEVGLLEYAATAGLTVVVVVFSIGSISGAHVNPSVTIAFA 113 (274)
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHHHHHhhccc-cC----CccchHHHHHHHHHHHHHHHHHhhccCccccCHHHHHHHH
Confidence 345677899999999999999999987643221 11 1234567889999999999999999999999999999999
Q ss_pred HhCCCCcchhHHHHHHHhHHHHHHHHHHHHHhcCCcCcccccCCCCchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCC
Q 025817 91 LGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNVAAGVGAIEGVVMEIIITFGLVYTVYATAADPKKGSLGT 170 (247)
Q Consensus 91 l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~l~~~il~~~~~~~~~~~~~ 170 (247)
+.|+++|.+.+.|+++|++|+++|+.+++.+++... ......+..+..++++.|+++|++|+++++.+..++++ .+.
T Consensus 114 l~g~i~~~~~~~Yi~aQ~lGa~~ga~l~~~~~~~~~-~~~~~~p~~~~~~~~~~E~v~T~iLv~~i~~~~~~~~~--~~~ 190 (274)
T PLN00183 114 TFGHFPWSKVPLYITAQTVGSVLATYVGVSVYGVKA-DLMTTKPAQGCSSAFWVEFIATFIVMFLAASLTSQPQS--LGH 190 (274)
T ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-ccccCCCcccHHHHHHHHHHHHHHHHHhhheeeccccC--CCC
Confidence 999999999999999999999999999888876422 23333445567899999999999999999987444332 233
Q ss_pred hhHHHHHHHHHHHHHhhcCCCCCccCchhhhhhhcCcCCCCceeeeecccchHHHHHHHHHHHhhcCCCCCC
Q 025817 171 IAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWVGPLIGGGLAGLIYGNVFMHSEHAP 242 (247)
Q Consensus 171 ~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~~~~~~~~~wvy~iap~~Ga~~a~~~~~~~~~~~~~~~ 242 (247)
..++.+|+.+.+.+++.+++||+++||||+|+|++...+|+++|+||++|++|+++++++|+.++.+.....
T Consensus 191 ~~~l~iGl~v~~~v~~~g~~TG~~~NPArtlgpai~~~~~~~~wvy~vapilGailaa~l~~~l~~~~~~~~ 262 (274)
T PLN00183 191 LSGFVIGIAIGLAVLITGPVSGGSMNPARSLGPAIVSWDFKDIWIYITAPTIGAVAGALMFHLLRLRTQPCS 262 (274)
T ss_pred ceehHHHHHHHHHHHhccCCCCCEeCHHHHHHHHHhCCChhheehHHHHHHHHHHHHHHHHHHHhccCCCCC
Confidence 578999999999999999999999999999999999889999999999999999999999999987765543
No 14
>cd00333 MIP Major intrinsic protein (MIP) superfamily. Members of the MIP superfamily function as membrane channels that selectively transport water, small neutral molecules, and ions out of and between cells. The channel proteins share a common fold: the N-terminal cytosolic portion followed by six transmembrane helices, which might have arisen through gene duplication. On the basis of sequence similarity and functional characteristics, the superfamily can be subdivided into two major groups: water-selective channels called aquaporins (AQPs) and glycerol uptake facilitators (GlpFs). AQPs are found in all three kingdoms of life, while GlpFs have been characterized only within microorganisms.
Probab=100.00 E-value=2.9e-43 Score=298.63 Aligned_cols=213 Identities=46% Similarity=0.751 Sum_probs=180.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhcccccCcCCCCCchHHHHHHHHHHHHHHHHHHhcCCCcccchHHHHHHHHhCCCCc
Q 025817 18 KAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITI 97 (247)
Q Consensus 18 ~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSGah~NPavTl~~~l~g~~~~ 97 (247)
|++++||+||+++++.++++....+. .+ +.+.++...++.+|+++.+.+++++++||+|+|||+|+++++.|+++|
T Consensus 1 r~~~~E~~gT~~lv~~~~~~~~~~~~-~~---~~~~~~~~~~~~~gl~v~~~~~~~~~~sga~~NPa~t~~~~~~~~~~~ 76 (228)
T cd00333 1 RKYLAEFLGTFLLVFFGCGSVLAVKL-AG---GASGGLLGIALAWGFAIFVLVYAVGHISGGHINPAVTLALAVGGRFPL 76 (228)
T ss_pred ChhhHHHHHHHHHHHHHhHHHhhccc-cC---CCCCcHHHHHHHHHHHHHHHHHHhccCCCCeEcHHHHHHHHHhCCCCH
Confidence 67899999999999999998754322 11 122346778999999999999999999999999999999999999999
Q ss_pred chhHHHHHHHhHHHHHHHHHHHHHhcCCc-----Cc-----c--cccCCCCchhHHHHHHHHHHHHHHHHHHhhccCCCC
Q 025817 98 LTGIFYWIAQLLGSIVASFLLKVVTGGLA-----VP-----T--HNVAAGVGAIEGVVMEIIITFGLVYTVYATAADPKK 165 (247)
Q Consensus 98 ~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~-----~~-----~--~~~~~~~~~~~~~~~E~~~T~~l~~~il~~~~~~~~ 165 (247)
++.+.|+++|++|+++|+.+.+.+++++. .. . ..+.++.+..++++.|+++|++|+++++.+..++++
T Consensus 77 ~~~~~y~~aq~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~v~T~~Lv~~i~~~~~~~~~ 156 (228)
T cd00333 77 IRVIPYIIAQLLGAILGAALLYGLYYGLYLEFLGANNIVAGIFGTYPSPGVSNGNAFFVEFIGTFILVLVVFATTDDPNG 156 (228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHHHhhcCCccccccceeccCCCCCccHHHHHHHHHHHHHHHHHHHHHHcccccc
Confidence 99999999999999999999888765311 11 1 124556688999999999999999999998544332
Q ss_pred CCCCChhHHHHHHHHHHHHHhhcCCCCCccCchhhhhhhcCcCC---CCceeeeecccchHHHHHHHHHHHh
Q 025817 166 GSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGN---FQDNWIYWVGPLIGGGLAGLIYGNV 234 (247)
Q Consensus 166 ~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~~~~~---~~~~wvy~iap~~Ga~~a~~~~~~~ 234 (247)
.......++.+|+.+....++.+++||+++|||||+++++..+. |+++|+||++|++|+++++++|+++
T Consensus 157 ~~~~~~~~~~iGl~v~~~~~~~g~~sG~~~NPAr~~g~~i~~~~~~~~~~~~vy~vap~lGai~aa~l~~~~ 228 (228)
T cd00333 157 PPPGGLAPLAIGLLVAAIGLAGGPITGASMNPARSLGPALFTGLARHWHYFWVYWVGPLIGAIAGALVYDYV 228 (228)
T ss_pred CCCCCcHHHHHHHHHHHHHHHhhcccccccCHhhchHHHHHhccccccceeehhhhHHHHHHHHHHHHHHhC
Confidence 22344789999999999999999999999999999999998875 9999999999999999999999864
No 15
>TIGR00861 MIP MIP family channel proteins. processes. Some members of the family, including the yeast FPS protein (TC #1.A.8.5.1) and tobacco NtTIPA may transport both water and small solutes.
Probab=100.00 E-value=4.1e-42 Score=289.28 Aligned_cols=210 Identities=40% Similarity=0.664 Sum_probs=174.1
Q ss_pred HHHHHHHHHHHHHHHHhhhhcccccCcCCCCCchHHHHHHHHHHHHHHHHHHhcCCCcccchHHHHHHHHhCCCCcchhH
Q 025817 22 AEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGI 101 (247)
Q Consensus 22 ~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSGah~NPavTl~~~l~g~~~~~~~~ 101 (247)
+||+||+++++.++++..............+.++..+++.+|+++.+.+++++++||+|+|||+|+++++.|+++|++.+
T Consensus 1 aEf~gT~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~Gl~v~~~~~~~~~~sg~h~NPavt~~~~l~~~~~~~~~~ 80 (216)
T TIGR00861 1 AEFLGTFLLVFFGVGSALGVNVAGAYGAVGGGQFLGVALAFGLAVATLVYCVGGISGAHLNPAVTIALLLGRRFPLKRVP 80 (216)
T ss_pred CcHHHHHHHHHHHHHHHHhhhcccccCCCCCcchHHHHHHHHHHHHHHHHHHhcccccccCHHHHHHHHHhCCCCHHHHH
Confidence 59999999999999987653221100111122567889999999999999999999999999999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHHHHhcCCc---Ccc-cccCCCCchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCChhHHHHH
Q 025817 102 FYWIAQLLGSIVASFLLKVVTGGLA---VPT-HNVAAGVGAIEGVVMEIIITFGLVYTVYATAADPKKGSLGTIAPIAIG 177 (247)
Q Consensus 102 ~yi~aQ~~Ga~~g~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~E~~~T~~l~~~il~~~~~~~~~~~~~~~~~~ig 177 (247)
.|+++|++|+++|+.+.+.++++.. ... ..+.++.+..++++.|+++|++|+++++....++++...+...++.+|
T Consensus 81 ~y~~aQ~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~i~T~~lv~~~~~~~~~~~~~~~~~~~~~~iG 160 (216)
T TIGR00861 81 VYIVAQLIGAILGAALLYGLTSGLFPGNLAVNGSGAAGVSSGQAFFVEFIGTAILVLVIFATTDPRNRVPRGGFAPLAIG 160 (216)
T ss_pred HHHHHHHHHHHHHHHHHHHHccccccCCccccCCCCCcccHHHHHHHHHHHHHHHHHHHheeecCCCCCCCCccHHHHHH
Confidence 9999999999999999998876431 111 112345688999999999999999999987443332222337899999
Q ss_pred HHHHHHHHhhcCCCCCccCchhhhhhhcCcC--CCCceeeeecccchHHHHHHHHH
Q 025817 178 FIVGANILAAGPFSGGSMNPARSFGPAVASG--NFQDNWIYWVGPLIGGGLAGLIY 231 (247)
Q Consensus 178 ~~v~~~~~~~~~~sG~~lNPA~~lg~~~~~~--~~~~~wvy~iap~~Ga~~a~~~~ 231 (247)
+.+...++..+++||+++||||++++++.++ +|+++|+||++|++|+++++.+|
T Consensus 161 ~~v~~~~~~~g~~sG~~~NPAr~l~~~l~~~~~~~~~~~vy~vap~~Ga~~a~~~y 216 (216)
T TIGR00861 161 LLVFLIHLSMGPYTGTGMNPARSLGPALFAGLAGWGNHWVYWVGPIIGAILGALVY 216 (216)
T ss_pred HHHHHHHHhCCCCcccccCchhhhhHHHHhccccccceeHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999887 89999999999999999998875
No 16
>PLN00184 aquaporin NIP1; Provisional
Probab=99.64 E-value=2.4e-16 Score=137.73 Aligned_cols=104 Identities=23% Similarity=0.299 Sum_probs=85.6
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHhhccCCCC-CCCCCh--hHHHHHHHHHHHHHhhcCCCCCccCchhhhhhhcCcC-CC
Q 025817 135 GVGAIEGVVMEIIITFGLVYTVYATAADPKK-GSLGTI--APIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASG-NF 210 (247)
Q Consensus 135 ~~~~~~~~~~E~~~T~~l~~~il~~~~~~~~-~~~~~~--~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~~~~-~~ 210 (247)
+.+..+.++.|+++|++|++++++....... ...... .++.+|+++++.+++.+++||+|+||||++++++.+. +|
T Consensus 50 ~~~~~~~~~aEfiGTflLvf~g~g~~~~~~~~~~~~~~~~iai~~Gl~v~~~i~~~g~iSGaH~NPAVTla~al~g~~~~ 129 (296)
T PLN00184 50 SVPFLQKLIAEVLGTYFLVFTGCASVVVNMQNDNVVTLPGIAIVWGLTIMVLIYSLGHISGAHINPAVTIAFASCGRFPL 129 (296)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCccccHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHhCCCCH
Confidence 3456789999999999999999886432211 111123 4566699999999999999999999999999999876 79
Q ss_pred CceeeeecccchHHHHHHHHHHHhhcCC
Q 025817 211 QDNWIYWVGPLIGGGLAGLIYGNVFMHS 238 (247)
Q Consensus 211 ~~~wvy~iap~~Ga~~a~~~~~~~~~~~ 238 (247)
.+.|+||++|++|+++|+.+++.++...
T Consensus 130 ~~~~~YiiaQllGA~lga~~~~~l~~~~ 157 (296)
T PLN00184 130 KQVPAYVISQVIGSTLAAATLRLLFGLD 157 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcch
Confidence 9999999999999999999999987543
No 17
>PLN00182 putative aquaporin NIP4; Provisional
Probab=99.64 E-value=9.4e-16 Score=133.24 Aligned_cols=99 Identities=24% Similarity=0.324 Sum_probs=83.6
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhhhcccccCcCCCCCchHHHHHHHHHHHHHHHHHHhcCCCcccchHHHHHHHHhC
Q 025817 14 LGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGG 93 (247)
Q Consensus 14 ~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSGah~NPavTl~~~l~g 93 (247)
.+.++.+++|+++|++|++.+++.....+. ... ..++++|+.+++.++..+++||+|+|||+|+++++.+
T Consensus 156 ~s~~~a~~~E~l~TfiLv~~i~~~~~~~~~--------~~~--~~~l~iGl~V~~~~~~~g~~SGa~lNPARt~gpal~~ 225 (283)
T PLN00182 156 DSSGQALVAEIIISFLLMFVISGVATDSRA--------VGE--LAGIAVGMTIILNVFVAGPISGASMNPARSLGPAIVM 225 (283)
T ss_pred cchHHHHHHHHHHHHHHHHHHHhheecccc--------CCc--chhHHHHHHHHHHHHHccccCccccChHHHHHHHHHh
Confidence 456899999999999999998875432110 111 2578999999999999999999999999999999986
Q ss_pred CCCcchhHHHHHHHhHHHHHHHHHHHHHhc
Q 025817 94 QITILTGIFYWIAQLLGSIVASFLLKVVTG 123 (247)
Q Consensus 94 ~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~ 123 (247)
+ .|.+.|+||++|++|+++|+++++.+..
T Consensus 226 ~-~~~~~wvY~vap~lGA~lgally~~l~~ 254 (283)
T PLN00182 226 G-RYKGIWVYIVGPFVGIIAGGFVYNLIRF 254 (283)
T ss_pred c-cccceeHHHHHHHHHHHHHHHHHHHHhc
Confidence 5 6899999999999999999999888763
No 18
>PLN00026 aquaporin NIP; Provisional
Probab=99.64 E-value=2.8e-16 Score=137.14 Aligned_cols=106 Identities=21% Similarity=0.228 Sum_probs=87.5
Q ss_pred CCCCchhHHHHHHHHHHHHHHHHHHhhccCCCC-CCCCCh--hHHHHHHHHHHHHHhhcCCCCCccCchhhhhhhcCcC-
Q 025817 133 AAGVGAIEGVVMEIIITFGLVYTVYATAADPKK-GSLGTI--APIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASG- 208 (247)
Q Consensus 133 ~~~~~~~~~~~~E~~~T~~l~~~il~~~~~~~~-~~~~~~--~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~~~~- 208 (247)
.++.+.++.++.|+++|++|++++++....+++ ...... .++.+|+++.+.+++.+++||+|+||||++++++.+.
T Consensus 65 ~~~~~~~r~~laEfiGTflLvf~g~~~~~~~~~~~~~~~~~~ial~~GlaV~~~i~~~g~ISGaHlNPAVTla~al~g~~ 144 (298)
T PLN00026 65 PPDVSLTRKLGAEFVGTFILIFAATAGPIVNQKYDGAETLIGNAACAGLAVMIVILSTGHISGAHLNPSLTIAFAALRHF 144 (298)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHhccccCCccchHHHHHHHHHHHHHHHHHhhccCccccCHHHHHHHHHhCCC
Confidence 345677899999999999999999865332221 111122 3579999999999999999999999999999999765
Q ss_pred CCCceeeeecccchHHHHHHHHHHHhhcCC
Q 025817 209 NFQDNWIYWVGPLIGGGLAGLIYGNVFMHS 238 (247)
Q Consensus 209 ~~~~~wvy~iap~~Ga~~a~~~~~~~~~~~ 238 (247)
.|.+.|+||++|++|+++|+++++.++.+.
T Consensus 145 ~~~~~~~YiiaQilGAi~aa~~~~~~~~~~ 174 (298)
T PLN00026 145 PWKHVPAYIAAQVSASICASFALKGVFHPF 174 (298)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 789999999999999999999999988653
No 19
>PLN00183 putative aquaporin NIP7; Provisional
Probab=99.63 E-value=1.5e-15 Score=131.52 Aligned_cols=112 Identities=21% Similarity=0.314 Sum_probs=90.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhcccccCcCCCCCchHHHHHHHHHHHHHHHHHHhcCCCcccchHHHHHHHHhCC
Q 025817 15 GSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQ 94 (247)
Q Consensus 15 ~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSGah~NPavTl~~~l~g~ 94 (247)
..++.++.|+++|+++++.+++....... ... ..++.+|+.+.+.++..+++||+|+|||+|+++++.+
T Consensus 159 ~~~~~~~~E~v~T~iLv~~i~~~~~~~~~--------~~~--~~~l~iGl~v~~~v~~~g~~TG~~~NPArtlgpai~~- 227 (274)
T PLN00183 159 GCSSAFWVEFIATFIVMFLAASLTSQPQS--------LGH--LSGFVIGIAIGLAVLITGPVSGGSMNPARSLGPAIVS- 227 (274)
T ss_pred cHHHHHHHHHHHHHHHHHhhheeeccccC--------CCC--ceehHHHHHHHHHHHhccCCCCCEeCHHHHHHHHHhC-
Confidence 46889999999999999998876432110 011 2367899999999999999999999999999999997
Q ss_pred CCcchhHHHHHHHhHHHHHHHHHHHHHhcCCcCcccccCCCCc
Q 025817 95 ITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNVAAGVG 137 (247)
Q Consensus 95 ~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~~ 137 (247)
.+|.+.|+||++|++|+++|+++++.+..+........+|+.|
T Consensus 228 ~~~~~~wvy~vapilGailaa~l~~~l~~~~~~~~~~~~~~~~ 270 (274)
T PLN00183 228 WDFKDIWIYITAPTIGAVAGALMFHLLRLRTQPCSPNSSPNTS 270 (274)
T ss_pred CChhheehHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCchh
Confidence 4899999999999999999999999988655444444455444
No 20
>cd00333 MIP Major intrinsic protein (MIP) superfamily. Members of the MIP superfamily function as membrane channels that selectively transport water, small neutral molecules, and ions out of and between cells. The channel proteins share a common fold: the N-terminal cytosolic portion followed by six transmembrane helices, which might have arisen through gene duplication. On the basis of sequence similarity and functional characteristics, the superfamily can be subdivided into two major groups: water-selective channels called aquaporins (AQPs) and glycerol uptake facilitators (GlpFs). AQPs are found in all three kingdoms of life, while GlpFs have been characterized only within microorganisms.
Probab=99.63 E-value=1.7e-15 Score=128.61 Aligned_cols=101 Identities=23% Similarity=0.350 Sum_probs=85.0
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHhhhhcccccCcCCCCCchHHHHHHHHHHHHHHHHHHhcCCCcccchHHHHHHHH
Q 025817 12 FSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLAL 91 (247)
Q Consensus 12 ~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSGah~NPavTl~~~l 91 (247)
.+.+.+|.++.|+++|+++++..+........ ..+....++.+|+.+....+..+++||+|+|||+++++.+
T Consensus 125 ~~~~~~~~~~~E~v~T~~Lv~~i~~~~~~~~~--------~~~~~~~~~~iGl~v~~~~~~~g~~sG~~~NPAr~~g~~i 196 (228)
T cd00333 125 PGVSNGNAFFVEFIGTFILVLVVFATTDDPNG--------PPPGGLAPLAIGLLVAAIGLAGGPITGASMNPARSLGPAL 196 (228)
T ss_pred CCccHHHHHHHHHHHHHHHHHHHHHHcccccc--------CCCCCcHHHHHHHHHHHHHHHhhcccccccCHhhchHHHH
Confidence 34577899999999999999998876532111 0122246899999999999999999999999999999999
Q ss_pred hCCC--CcchhHHHHHHHhHHHHHHHHHHHH
Q 025817 92 GGQI--TILTGIFYWIAQLLGSIVASFLLKV 120 (247)
Q Consensus 92 ~g~~--~~~~~~~yi~aQ~~Ga~~g~~~~~~ 120 (247)
.++. +|++.|+||++|++|+++|+++++.
T Consensus 197 ~~~~~~~~~~~~vy~vap~lGai~aa~l~~~ 227 (228)
T cd00333 197 FTGLARHWHYFWVYWVGPLIGAIAGALVYDY 227 (228)
T ss_pred HhccccccceeehhhhHHHHHHHHHHHHHHh
Confidence 9998 7999999999999999999988654
No 21
>PLN00167 aquaporin TIP5; Provisional
Probab=99.54 E-value=1.4e-14 Score=124.52 Aligned_cols=102 Identities=27% Similarity=0.433 Sum_probs=85.5
Q ss_pred CchhHHHHHHHHHHHHHHHHHHhhccCCCC-----CC-C--CChhHHHHHHHHHHHHHhhcCCCCCccCchhhhhhhcCc
Q 025817 136 VGAIEGVVMEIIITFGLVYTVYATAADPKK-----GS-L--GTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVAS 207 (247)
Q Consensus 136 ~~~~~~~~~E~~~T~~l~~~il~~~~~~~~-----~~-~--~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~~~ 207 (247)
.+.++.++.|+++|++|+++.++...++++ .. . .-..++.+|+++.+.+++.+++||+|+|||+++++.+.+
T Consensus 19 ~~~~~~~laEflgTf~lv~~~~g~~~~~~~~~~~~~~~~~~~~~i~l~~Gl~v~~~i~~~g~iSGah~NPAvtl~~~~~g 98 (256)
T PLN00167 19 RNALRSYLAEFISTFFFVFAAVGSAMSSRKLMPDAASDPSSLLIVAIANAFALSSAVYIAANISGGHVNPAVTFGMAVGG 98 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccCCCCcchHHHHHHHHHHHHHHHHhhcccccccCHHHHHHHHHhC
Confidence 456789999999999999999887543221 00 1 114689999999999999999999999999999999976
Q ss_pred C-CCCceeeeecccchHHHHHHHHHHHhhcC
Q 025817 208 G-NFQDNWIYWVGPLIGGGLAGLIYGNVFMH 237 (247)
Q Consensus 208 ~-~~~~~wvy~iap~~Ga~~a~~~~~~~~~~ 237 (247)
. .|...|+||++|++|+++++.+++.++..
T Consensus 99 ~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~ 129 (256)
T PLN00167 99 HISVPTAMFYWISQMLASVMACLFLKVTTVG 129 (256)
T ss_pred CCcHhhhhHHHHHHHHHHHHHHHHHHHhhcc
Confidence 5 68999999999999999999999887543
No 22
>TIGR00861 MIP MIP family channel proteins. processes. Some members of the family, including the yeast FPS protein (TC #1.A.8.5.1) and tobacco NtTIPA may transport both water and small solutes.
Probab=99.54 E-value=1.9e-14 Score=121.17 Aligned_cols=97 Identities=23% Similarity=0.384 Sum_probs=80.8
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHhhhhcccccCcCCCCCchHHHHHHHHHHHHHHHHHHhcCCCcccchHHHHHHHHh
Q 025817 13 SLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALG 92 (247)
Q Consensus 13 ~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSGah~NPavTl~~~l~ 92 (247)
+.+.+|.++.|+++|+++++..+.......+. . .+ ...++.+|+.+...++..+++||+|+|||++++..+.
T Consensus 118 ~~~~~~~~~~E~i~T~~lv~~~~~~~~~~~~~------~-~~-~~~~~~iG~~v~~~~~~~g~~sG~~~NPAr~l~~~l~ 189 (216)
T TIGR00861 118 GVSSGQAFFVEFIGTAILVLVIFATTDPRNRV------P-RG-GFAPLAIGLLVFLIHLSMGPYTGTGMNPARSLGPALF 189 (216)
T ss_pred cccHHHHHHHHHHHHHHHHHHHheeecCCCCC------C-CC-ccHHHHHHHHHHHHHHhCCCCcccccCchhhhhHHHH
Confidence 34779999999999999999988764321110 0 11 1468999999999999999999999999999999998
Q ss_pred C-CCCcchhHHHHHHHhHHHHHHHHH
Q 025817 93 G-QITILTGIFYWIAQLLGSIVASFL 117 (247)
Q Consensus 93 g-~~~~~~~~~yi~aQ~~Ga~~g~~~ 117 (247)
+ +.+|.+.|+||++|++|+++++.+
T Consensus 190 ~~~~~~~~~~vy~vap~~Ga~~a~~~ 215 (216)
T TIGR00861 190 AGLAGWGNHWVYWVGPIIGAILGALV 215 (216)
T ss_pred hccccccceeHHHHHHHHHHHHHHHh
Confidence 6 578999999999999999999875
No 23
>KOG0223 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=99.53 E-value=8.8e-15 Score=123.73 Aligned_cols=108 Identities=23% Similarity=0.347 Sum_probs=91.9
Q ss_pred cccCCcCChhhHHHHHHHHHHHHHHHHHHHHHhhhhcccccCcCCCCCchHHHHHHHHHHHHHHHHHHhcCCCcccchHH
Q 025817 6 GRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAV 85 (247)
Q Consensus 6 g~~~~~~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSGah~NPav 85 (247)
+......+.+..|.++.|++.||.+++..++...+.++. ...++.+|+++.+.+.+.+++||++||||+
T Consensus 121 ~~~~~~~~~~~~q~~~~E~ilTf~Lv~~v~~~a~d~~~~-----------~~a~l~IG~~v~~~~l~~g~~TG~sMNPAr 189 (238)
T KOG0223|consen 121 GLTGLAPGLSTGQGLVIEIILTFILVFTVFATATDPRRS-----------ELAPLAIGFSVGLNILAAGPFTGASMNPAR 189 (238)
T ss_pred ceeccCCCCCcchhHHHHHHHHHHHhheeEEEeecCCCc-----------ccHHHHHHHHHHHHHHeecCcCcCccCcHH
Confidence 444556677789999999999999999987643322111 367899999999999999999999999999
Q ss_pred HHHHHHhCCCCcchhHHHHHHHhHHHHHHHHHHHHHhcCC
Q 025817 86 TFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGL 125 (247)
Q Consensus 86 Tl~~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~ 125 (247)
|++.++..+ +|+.+|+||++|++|+++++++++.++.++
T Consensus 190 SfGpAvv~~-~w~~hwiYwvgP~~Ga~~a~~~y~~v~~~~ 228 (238)
T KOG0223|consen 190 SFGPAVVYG-SWDDHWIYWVGPLLGAILAALIYRLVFIPD 228 (238)
T ss_pred HhhHHHHhc-CCCcEEEEEhhHHHHHHHHHHHHHHhccCc
Confidence 999999988 599999999999999999999999887643
No 24
>PLN00166 aquaporin TIP2; Provisional
Probab=99.53 E-value=1.4e-14 Score=124.11 Aligned_cols=102 Identities=23% Similarity=0.364 Sum_probs=84.4
Q ss_pred CchhHHHHHHHHHHHHHHHHHHhhccC--CCC--CC--CCC--hhHHHHHHHHHHHHHhhcCCCCCccCchhhhhhhcCc
Q 025817 136 VGAIEGVVMEIIITFGLVYTVYATAAD--PKK--GS--LGT--IAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVAS 207 (247)
Q Consensus 136 ~~~~~~~~~E~~~T~~l~~~il~~~~~--~~~--~~--~~~--~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~~~ 207 (247)
.+..+.++.|+++|++|+++.++...+ +.+ +. ... ..++.+|+.+++.+++.+++||+|+||||++++.+.+
T Consensus 15 ~~~~~~~~aEfigTf~lv~~g~g~~~~~~~~~~~~~~~~~~~~~ial~~Gl~v~~~i~~~g~iSGah~NPAvt~~~~l~g 94 (250)
T PLN00166 15 VASLKAYLSEFIATLLFVFAGVGSAIAFAKLTSDAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAIGG 94 (250)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCccHHHHHHHHHHHHHHHHHHhcccccccCHHHHHHHHHhC
Confidence 456789999999999999999987433 111 11 112 3577799999999999999999999999999999975
Q ss_pred C-CCCceeeeecccchHHHHHHHHHHHhhcC
Q 025817 208 G-NFQDNWIYWVGPLIGGGLAGLIYGNVFMH 237 (247)
Q Consensus 208 ~-~~~~~wvy~iap~~Ga~~a~~~~~~~~~~ 237 (247)
+ +|.+.|+||++|++|+++++.+++.++..
T Consensus 95 ~~~~~~~~~y~~aq~lGa~~~a~~~~~~~~~ 125 (250)
T PLN00166 95 NITIITGFFYWIAQCLGSIVACLLLVFVTNG 125 (250)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 4 68889999999999999999999988643
No 25
>PRK05420 aquaporin Z; Provisional
Probab=99.50 E-value=3.9e-14 Score=120.22 Aligned_cols=99 Identities=24% Similarity=0.265 Sum_probs=80.9
Q ss_pred hHHHHHHHHHHHHHHHHHHhhccCCC--CCC-CCC-hhHHHHHHHHHHHHHhhcCCCCCccCchhhhhhhcCcC-CCCce
Q 025817 139 IEGVVMEIIITFGLVYTVYATAADPK--KGS-LGT-IAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASG-NFQDN 213 (247)
Q Consensus 139 ~~~~~~E~~~T~~l~~~il~~~~~~~--~~~-~~~-~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~~~~-~~~~~ 213 (247)
.|.++.|+++|++|+++.++.....+ +.. .+. ..++.+|+++.+.+++.++.||+|+|||+++++.+.+. +|.+.
T Consensus 2 ~~~~laEfigT~~lv~~g~~~~~~~~~~~~~~~~~~~ial~~Gl~v~~~i~~~g~iSG~h~NPAvtl~~~~~~~i~~~~~ 81 (231)
T PRK05420 2 FKKLAAEFFGTFWLVFGGCGSAVLAAAFPELGIGFLGVALAFGLTVLTMAYAVGHISGGHFNPAVSVGLWAGGRFPAKEL 81 (231)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHhhcccCCCCCchHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHhCCCCHHHh
Confidence 47899999999999999877532211 111 111 24789999999999999999999999999999999865 79999
Q ss_pred eeeecccchHHHHHHHHHHHhhcC
Q 025817 214 WIYWVGPLIGGGLAGLIYGNVFMH 237 (247)
Q Consensus 214 wvy~iap~~Ga~~a~~~~~~~~~~ 237 (247)
|+||++|++|+++++.+.+.++.+
T Consensus 82 ~~Y~~aQ~lGa~~ga~l~~~~~~~ 105 (231)
T PRK05420 82 VPYIIAQVVGGIAAAAVLYLIASG 105 (231)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999999777776643
No 26
>PTZ00016 aquaglyceroporin; Provisional
Probab=99.49 E-value=2.7e-14 Score=125.12 Aligned_cols=101 Identities=24% Similarity=0.302 Sum_probs=84.4
Q ss_pred chhHHHHHHHHHHHHHHHHHHhhccCCCCCC-CCC--hhHHHHHHHHHHHHHhhcCCCCCccCchhhhhhhcCcC-CCCc
Q 025817 137 GAIEGVVMEIIITFGLVYTVYATAADPKKGS-LGT--IAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASG-NFQD 212 (247)
Q Consensus 137 ~~~~~~~~E~~~T~~l~~~il~~~~~~~~~~-~~~--~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~~~~-~~~~ 212 (247)
+..+.++.|+++|++|+++.++...+..... ... ..++.+|+++.+.+++.+++||+|+|||+++++++.+. .|..
T Consensus 48 ~~~~~~laEfigT~llvf~g~g~~~~~~~~~~~~~~~~ial~~Glav~~~i~~~g~iSG~h~NPAVTla~~l~g~i~~~~ 127 (294)
T PTZ00016 48 PNVREYVAEFLGTFVLLFFGEGVVATTHTVGNNGDYLAITIGWGLGVTFGLLVSAGISGGHLNPAVTLGNAVFGKFPWKK 127 (294)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcHHHHHHHHHHHHHHHHHhcccCcCccCHHHHHHHHHhccCCHHH
Confidence 4568999999999999999888643322111 112 35778899999999999999999999999999999877 7999
Q ss_pred eeeeecccchHHHHHHHHHHHhhcC
Q 025817 213 NWIYWVGPLIGGGLAGLIYGNVFMH 237 (247)
Q Consensus 213 ~wvy~iap~~Ga~~a~~~~~~~~~~ 237 (247)
.|+||++|++|+++|+.+.+.++.+
T Consensus 128 ~~~YiiaQ~lGa~~ga~ll~~~~~~ 152 (294)
T PTZ00016 128 LPGYFVAQLLGAFVGAACVYGLYYG 152 (294)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 9999999999999999998888765
No 27
>COG0580 GlpF Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism]
Probab=99.40 E-value=1.7e-13 Score=115.77 Aligned_cols=107 Identities=21% Similarity=0.196 Sum_probs=87.8
Q ss_pred chhHHHHHHHHHHHHHHHHHHhhccC----CCC-CCCCC-hhHHHHHHHHHHHHHhhcCCCCCccCchhhhhhhcCcC-C
Q 025817 137 GAIEGVVMEIIITFGLVYTVYATAAD----PKK-GSLGT-IAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASG-N 209 (247)
Q Consensus 137 ~~~~~~~~E~~~T~~l~~~il~~~~~----~~~-~~~~~-~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~~~~-~ 209 (247)
+..+.++.|+++|++|++...+.... +.+ ...+. ...+.+|+.+.+.+++.+++||+|+|||++++.++.++ +
T Consensus 3 ~~~~~~~aEflGT~~Li~~G~G~~a~~~l~~~~~~~~~~~~i~~~wGl~V~~~iy~~g~iSGaHlNPAVTi~la~~g~fp 82 (241)
T COG0580 3 TLTKKLLAEFLGTFLLIFFGNGSVAAVALKGSKALGGGWLGIALAWGLGVLVAIYAFGGISGAHLNPAVTIALAVRGRFP 82 (241)
T ss_pred cHHHHHHHHHHHHHHHHHhhccHHHHHHhccccccccceeehhHHHHHHHHHHHHhccCcCccccChHHHHHHHHhCCCC
Confidence 34567899999999999987654321 111 11111 36889999999999999999999999999999999876 7
Q ss_pred CCceeeeecccchHHHHHHHHHHHhhcCCCCCCC
Q 025817 210 FQDNWIYWVGPLIGGGLAGLIYGNVFMHSEHAPL 243 (247)
Q Consensus 210 ~~~~wvy~iap~~Ga~~a~~~~~~~~~~~~~~~~ 243 (247)
|++...|+++|++|+++++.+...++.++..+.+
T Consensus 83 ~~~v~~YivAQ~lGA~~ga~l~~~~~~~~~~~~~ 116 (241)
T COG0580 83 WRKVLPYIVAQVLGAFAGAALLYLLYYGKILETE 116 (241)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhc
Confidence 9999999999999999999999998888777665
No 28
>PLN00027 aquaporin TIP; Provisional
Probab=99.40 E-value=4e-12 Score=109.31 Aligned_cols=104 Identities=26% Similarity=0.433 Sum_probs=85.1
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHhhhhcccccCcCCCCCchHHHHHHHHHHHHHHHHHHhcCCCcccchHHHHHHHH
Q 025817 12 FSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLAL 91 (247)
Q Consensus 12 ~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSGah~NPavTl~~~l 91 (247)
.+.+.++.++.|+++||+|++..+......++. + . ....++.+|+.+....+..++.||+.+|||+++++.+
T Consensus 137 ~~~~~~~~~~~E~i~Tf~Lv~~i~~~~~~~~~~------~-~-~~~~p~~iGl~v~~~~~~~g~~TG~~~NPAR~~gPal 208 (252)
T PLN00027 137 SGVGVWNAFVFEIVMTFGLVYTVYATAVDPKKG------D-L-GIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAV 208 (252)
T ss_pred CCccHHHHHHHHHHHHHHHHHHHHHhccccccC------C-c-cchHHHHHHHHHHHHHHhcccccccccCcchhHHHHH
Confidence 355678999999999999999987654221110 0 0 1146788999999999999999999999999999999
Q ss_pred hCCCCcchhHHHHHHHhHHHHHHHHHHHHHhcC
Q 025817 92 GGQITILTGIFYWIAQLLGSIVASFLLKVVTGG 124 (247)
Q Consensus 92 ~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~ 124 (247)
... .|...|+||++|++|+++|+++++.+..+
T Consensus 209 ~~~-~~~~~wvy~vgP~~Ga~laa~~y~~l~~~ 240 (252)
T PLN00027 209 VSW-TWTNHWVYWAGPLIGGGIAGLVYELIFIG 240 (252)
T ss_pred Hhh-cchhhhHHHHHHHHHHHHHHHHHHHHhcC
Confidence 876 68899999999999999999998888753
No 29
>KOG0224 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=99.39 E-value=1.3e-13 Score=118.12 Aligned_cols=104 Identities=23% Similarity=0.322 Sum_probs=85.8
Q ss_pred chhHHHHHHHHHHHHHHHHHHhhccCCCC--CCCCC--hhHHHHHHHHHHHHHhhcCCCCCccCchhhhhhhcCcC-CCC
Q 025817 137 GAIEGVVMEIIITFGLVYTVYATAADPKK--GSLGT--IAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASG-NFQ 211 (247)
Q Consensus 137 ~~~~~~~~E~~~T~~l~~~il~~~~~~~~--~~~~~--~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~~~~-~~~ 211 (247)
...|.+++||++|++|++..++++....- .+.+. ...+.+|++++..+++.+.+||+|+|||++++..+.++ .|.
T Consensus 30 ~l~Re~LAEFlGT~vL~~~G~g~v~Q~vls~g~~g~~~~vnlgwg~av~~gVyvag~iSGgHlNPAVS~a~~~~g~~p~~ 109 (316)
T KOG0224|consen 30 ELLREFLAEFLGTFVLVVFGLGSVAQAVLSGGTGGSFIGVNLGWGFAVMMGVYVAGRISGGHLNPAVSLAMCILGRLPWK 109 (316)
T ss_pred HHHHHHHHHHHhHHHHHhhccceeEEEEeccCCCCceEEEEehHhHHHHHHHHhhccccccccCHHHHHHHHHhcCCChh
Confidence 46789999999999999988876432211 11122 35789999999999999999999999999999999877 799
Q ss_pred ceeeeecccchHHHHHHHHHHHhhcCCCC
Q 025817 212 DNWIYWVGPLIGGGLAGLIYGNVFMHSEH 240 (247)
Q Consensus 212 ~~wvy~iap~~Ga~~a~~~~~~~~~~~~~ 240 (247)
++.+|.++|++||++++.....+|++...
T Consensus 110 k~p~Y~~aQ~iGAF~gaa~~y~~y~d~i~ 138 (316)
T KOG0224|consen 110 KFPVYVLAQFIGAFLGAATVYGLYYDAIN 138 (316)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999887777766543
No 30
>PF00230 MIP: Major intrinsic protein; InterPro: IPR000425 A number of transmembrane (TM) channel proteins can be grouped together on the basis of sequence similarities [, , , , ]. These include: Mammalian major intrinsic protein (MIP). MIP is the major component of lens fibre gap junctions. Mammalian aquaporins []. These proteins form water- specific channels that provide the plasma membranes of red cells and kidney prox imal and collecting tubules with high permeability to water, thereby permitting water to move in the direction of an osmotic gradient. Soybean nodulin-26, a major component of the peribacteroid membrane induced during nodulation in legume roots after Rhizobium infection. Plants tonoplast intrinsic proteins (TIP). There are various isoforms of TIP : alpha (seed), gamma, Rt (root), and Wsi (water-stress induced). These proteins may allow the diffusion of water, amino acids and/or peptides from the tonoplas t interior to the cytoplasm. Bacterial glycerol facilitator protein (gene glpF), which facilitates the mo vement of glycerol across the cytoplasmic membrane. Salmonella typhimurium propanediol diffusion fac ilitator (gene pduF). Yeast FPS1, a glycerol uptake/efflux facilitator protein. Drosophila neurogenic protein 'big brain' (bib). This protein may mediate in tercellular communication; it may functions by allowing the transport of certain molecules(s) and thereby sending a signal for an exodermal cell to become an ep idermoblast instead of a neuroblast. Yeast hypothetical protein YFL054c. A hypothetical protein from the pepX region of Lactococcus lactis. The structures of various members of the MIP family have been determined by means of X-ray diffraction [, , ], revealing the fold to comprise a right-handed bundle of 6 transmembrane (TM) alpha-helices [, , ]. Similarities in the N-and C-terminal halves of the molecule suggest that the proteins may have arisen through tandem, intragenic duplication of an ancestral protein that contained 3 TM domains []. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins []. Aquaporin-CHIP (Aquaporin 1) belongs to the Colton blood group system and is associated with Co(a/b) antigen.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3NE2_A 2C32_A 1YMG_A 2B6P_A 3C02_A 2B5F_D 3CN6_A 3CN5_A 1Z98_M 3CLL_A ....
Probab=99.27 E-value=2.7e-11 Score=102.59 Aligned_cols=101 Identities=26% Similarity=0.385 Sum_probs=81.2
Q ss_pred CCcCChhhHHHHHHHHHHHHHHHHHHHHHhhhhcccccCcCCCCCchHHHHHHHHHHHHHHHHHHhcCCCcccchHHHHH
Q 025817 9 DDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFG 88 (247)
Q Consensus 9 ~~~~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSGah~NPavTl~ 88 (247)
.+..+.+.++.++.|+++|+++++.........++.. .+. ..++.+|+.+....+..+..||+.+|||++++
T Consensus 127 ~~~~~~s~~~~~~~E~~~t~il~~~i~~~~~~~~~~~-------~~~-~~p~~ig~~v~~~~~~~~~~tG~~~NPAr~~g 198 (227)
T PF00230_consen 127 TPPPGISLGQAFFSEFIGTFILVLVILAVADDKRKFP-------LGP-LAPLAIGLTVGALVLAGGPYTGASLNPARALG 198 (227)
T ss_dssp GSTTTSSHHHHHHHHHHHHHHHHHHHHHHTSTTSSST-------SSG-GHHHHHHHHHHHHHHHHHHHHST-SSHHHHHH
T ss_pred cccccchhhhhhhhhhhhhhHHHhhhhhhcccccccc-------ccc-ccceeEEEEEeecccccccccccccCchhhcC
Confidence 3445667899999999999999998876653322111 111 35788899999999999999999999999999
Q ss_pred HHHhCCCCcchhHHHHHHHhHHHHHHHHHH
Q 025817 89 LALGGQITILTGIFYWIAQLLGSIVASFLL 118 (247)
Q Consensus 89 ~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~ 118 (247)
..+.... |...|+||++|++|+++|++++
T Consensus 199 ~~l~~~~-~~~~wvy~~~P~~Ga~~a~~~Y 227 (227)
T PF00230_consen 199 PALFSGI-WDYFWVYWVGPFIGAILAALLY 227 (227)
T ss_dssp HHHHHTH-HTTTTHHHHHHHHHHHHHHHHH
T ss_pred ceeeccc-CCeEEEEEehHHHHHHHHHhhC
Confidence 9999875 9999999999999999998863
No 31
>PRK11562 nitrite transporter NirC; Provisional
Probab=92.38 E-value=4.3 Score=35.31 Aligned_cols=178 Identities=13% Similarity=0.139 Sum_probs=90.6
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCcccchHHHHHHHHhCCCCcchhHHHHHHHhHHHHHHHHHHHHHhc---CCcCc---c
Q 025817 56 VAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTG---GLAVP---T 129 (247)
Q Consensus 56 ~~~~l~~g~~v~~~i~~~~~iSGah~NPavTl~~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~---~~~~~---~ 129 (247)
+..++.+++++.+.+...+..-=+ |=....-..+.||.+|++.+--|.-=.+|-++|+++.-++.. +...+ .
T Consensus 59 li~g~~F~~GLilVi~~G~eLFTg--n~~~~~~~~~~~~~s~~~~lr~w~iv~~GNliGa~~~A~l~~~~~~~~~~~~~~ 136 (268)
T PRK11562 59 LVMGATFGIALTLVIIAGSELFTG--HTMFLTFGVKAGTISHGQMWAILPQTWLGNLVGSVFVALLYSWGGGSLLPVDTS 136 (268)
T ss_pred HHHHHHHHHHHHHHHHhCcccccc--chHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhH
Confidence 344556666666666554443211 333333456678899999888888888888888776554431 11111 0
Q ss_pred c-----ccCCCCchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCChhHHHHHHHHHHHHHhhcCCCCCccCchhhhhhh
Q 025817 130 H-----NVAAGVGAIEGVVMEIIITFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPA 204 (247)
Q Consensus 130 ~-----~~~~~~~~~~~~~~E~~~T~~l~~~il~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~ 204 (247)
. .-..+.+..+.|+-=++|-++.++.+.... ..+ ..+....+. +-+++.+..+ ..=...|=- -+...
T Consensus 137 ~~~~ia~~K~~~~~~~~f~~gI~CNwLVclavw~~~-~~~--~~gKi~~i~--~pI~~Fv~~G--FEH~IANm~-~~~l~ 208 (268)
T PRK11562 137 IVHSVALAKTTAPAMVLFFKGALCNWLVCLAIWMAI-RTE--GAAKFIAIW--WCLLAFIASG--YEHSVANMT-LFALS 208 (268)
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH-hcc--ccchhHHHH--HHHHHHHHcC--CcchhHhHH-HHHHH
Confidence 0 001124567778888888888888776542 222 122222222 2222222222 111223311 11112
Q ss_pred cCcC-----CC----CceeeeecccchHH-HHHHHHHHHhhcCCCCCCC
Q 025817 205 VASG-----NF----QDNWIYWVGPLIGG-GLAGLIYGNVFMHSEHAPL 243 (247)
Q Consensus 205 ~~~~-----~~----~~~wvy~iap~~Ga-~~a~~~~~~~~~~~~~~~~ 243 (247)
+... .| ++.-+=.+|.++|+ ++-++.|.+.+.++.++++
T Consensus 209 ~~~~~~~~~~~~~~~~nlipvtLGNivGG~v~vg~~y~~~~~~~~~~~~ 257 (268)
T PRK11562 209 WFGHHSEAYTLAGIGHNLLWVTLGNTLSGAVFMGLGYWYATPKANRPVA 257 (268)
T ss_pred HHccCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCchh
Confidence 1111 11 22333467888888 5666778877766655544
No 32
>PRK09713 focB putative formate transporter; Provisional
Probab=87.66 E-value=19 Score=31.64 Aligned_cols=102 Identities=13% Similarity=0.149 Sum_probs=57.0
Q ss_pred hHHHHHHHHHHHHHHHHHHhcCCCcccchHHHHHHHHhCCCCcchhHHHHHHHhHHHHHHHHHHHHHhc--CC---cCcc
Q 025817 55 LVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTG--GL---AVPT 129 (247)
Q Consensus 55 ~~~~~l~~g~~v~~~i~~~~~iSGah~NPavTl~~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~--~~---~~~~ 129 (247)
-+..++.+.+++.+.+..-+..-=++. . ++.-...||.+|++..-.|.-=.+|-++|+++.-++.. +. +...
T Consensus 67 ~ll~g~~F~vGLilIv~~g~ELfTgN~--~-~~~~~~~~~i~~~~~l~~w~iv~~GNlvGal~~A~l~~~s~~~~~~~~~ 143 (282)
T PRK09713 67 HLVGGLCFTLGFILLAVCGTSLFTSSV--M-TVMAKSRGVISWRTWLINALLVACGNLAGIACFSLLIWFSGLVMSENAM 143 (282)
T ss_pred HHHHHHHHHHHHHHHHHhCccccHHHH--H-HHHHHHhCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccchh
Confidence 345566666777666665544332221 2 22234678889988886555555555555554433221 10 0000
Q ss_pred c-----c---cCCCCchhHHHHHHHHHHHHHHHHHHhh
Q 025817 130 H-----N---VAAGVGAIEGVVMEIIITFGLVYTVYAT 159 (247)
Q Consensus 130 ~-----~---~~~~~~~~~~~~~E~~~T~~l~~~il~~ 159 (247)
. . ...+.+..+.|+--++|-++.++.+...
T Consensus 144 ~~~~~~~ia~~K~~~~~~~~F~~gI~CN~lVclaV~~~ 181 (282)
T PRK09713 144 WGVAVLHCAEGKMHHTFTESVSLGIMCNLMVCLALWMS 181 (282)
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0 0113467888888888998888888754
No 33
>PRK10805 formate transporter; Provisional
Probab=85.73 E-value=24 Score=30.99 Aligned_cols=100 Identities=20% Similarity=0.346 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHHHHHHHHhc-CCCcccchHHHHHHHHhCCCCcchhHHHHHHHhHHHHHHHHHHHHHhc--C-C--cCcc
Q 025817 56 VAIAICHGFALFVAVAIGAN-ISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTG--G-L--AVPT 129 (247)
Q Consensus 56 ~~~~l~~g~~v~~~i~~~~~-iSGah~NPavTl~~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~--~-~--~~~~ 129 (247)
+..++.+.+++...+..-+. .+| |-..+.+ .+.||.++++..-.|.-=.+|-++|+++.-++.. + . ..+.
T Consensus 69 ll~~~~F~vGlilIvl~g~eLFTg---n~l~~~~-~~~~~~~~~~~lr~w~iv~~GNliGal~~a~l~~~s~~~~~~~~~ 144 (285)
T PRK10805 69 LVGGICFSLGLILCVVCGADLFTS---TVLIVVA-KASGRITWGQLAKNWLNVYFGNLVGALLFVLLMWLSGEYMTANGQ 144 (285)
T ss_pred HHHHHHHHHHHHHHHHhCcccchh---hHHHHHH-HHcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccCccH
Confidence 44456666666666655544 334 5555544 6778899999886666666666666655433321 1 0 0001
Q ss_pred c-----cc---CCCCchhHHHHHHHHHHHHHHHHHHhh
Q 025817 130 H-----NV---AAGVGAIEGVVMEIIITFGLVYTVYAT 159 (247)
Q Consensus 130 ~-----~~---~~~~~~~~~~~~E~~~T~~l~~~il~~ 159 (247)
. .. ..+.+..+.|+-=++|-++.++.+...
T Consensus 145 ~~~~~~~~a~~K~~~~~~~~f~~gI~CN~lVclaV~~~ 182 (285)
T PRK10805 145 WGLNVLQTADHKVHHTFIEAVCLGILANLMVCLAVWMS 182 (285)
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 00 113467788888888888888887654
No 34
>COG2116 FocA Formate/nitrite family of transporters [Inorganic ion transport and metabolism]
Probab=85.11 E-value=25 Score=30.58 Aligned_cols=180 Identities=18% Similarity=0.248 Sum_probs=92.2
Q ss_pred chHHHHHHHHHHHHHHHHHHhcCCCcccchHHHHHHHHhCCCCcchhHHHHHHHhHHHHHHHHHHHHHhc--C---CcCc
Q 025817 54 GLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTG--G---LAVP 128 (247)
Q Consensus 54 ~~~~~~l~~g~~v~~~i~~~~~iSGah~NPavTl~~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~--~---~~~~ 128 (247)
..+..++.+++++...+++.+..-=+ |--..-.-...++++|++.+--|.-=.+|-++|++++.+++. + ....
T Consensus 63 ~~lvg~~~F~~GLilVv~~g~ELfT~--n~m~~t~~~~~k~Is~~~ll~~w~~v~lgNliGa~~~a~l~~~~g~~~~~~~ 140 (265)
T COG2116 63 AKLVGGLVFSLGLILVVIAGSELFTS--NTMLLTVGVLSKKISWGQLLRNWLVVYLGNLIGALFVALLFHLSGFNLTANG 140 (265)
T ss_pred HHHHHHHHHHHHHHHhhhhCcccccc--chhHHHHHHHhCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccc
Confidence 45566777777777776655543211 322333345568899999888888888888888777655441 1 1111
Q ss_pred ccc--------cCCCCchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCChhHHHHHHHHHHHHHhhcCCCCCccCchhh
Q 025817 129 THN--------VAAGVGAIEGVVMEIIITFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARS 200 (247)
Q Consensus 129 ~~~--------~~~~~~~~~~~~~E~~~T~~l~~~il~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~ 200 (247)
.+. -..+.+..+.|.--.+|-.+.++.+... ...|.. .+ .-+.+ ...+..+....+.=...|-..-
T Consensus 141 ~~~~~~~~~a~~K~~~t~~~~F~~GI~cN~lVclAvwm~-~~~k~~-~~--K~~~m--~~pv~~Fv~~GfeH~VANm~~i 214 (265)
T COG2116 141 QWGLFVLGVAEHKLHHTFLEAFAKGILCNWLVCLAVWMS-YSAKDG-AA--KIFAI--ILPVMLFVASGFEHSVANMFMI 214 (265)
T ss_pred hhHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHH-hcccch-hh--HHHHH--HHHHHHHHHcCCceeeehHHHH
Confidence 110 0112355677777777777777777665 322211 11 12222 2223333333333334452222
Q ss_pred hhhhcCcC--CCCc-----eeeeecccchHH-HHHHHHHHHhhcCCCCC
Q 025817 201 FGPAVASG--NFQD-----NWIYWVGPLIGG-GLAGLIYGNVFMHSEHA 241 (247)
Q Consensus 201 lg~~~~~~--~~~~-----~wvy~iap~~Ga-~~a~~~~~~~~~~~~~~ 241 (247)
-..+...+ +|.+ .-.-.+|.++|+ ++-++.|..++..+.++
T Consensus 215 ~~~~~~~~~~~~~~fi~~Nlipv~lGNivGG~v~vgl~Y~~~~~~~~~~ 263 (265)
T COG2116 215 PWAAVFSGALTWADFILKNLIPVTLGNIVGGAVFVGLMYWYLYRKQNRY 263 (265)
T ss_pred HHHHHcCChhhhHHHHHHHHHHHHHhchhcchhhhhHHHHHhccccccc
Confidence 11222222 3433 222245666654 55677777776555443
No 35
>PF01226 Form_Nir_trans: Formate/nitrite transporter; InterPro: IPR000292 Proteins in this entry belong to the Formate-Nitrite Transporter (FNT) family (TC 2.A.44). The prokaryotic proteins of the FNT family probably function in the transport of the structurally related compounds, formate and nitrite. The homologous yeast protein may function as a short chain aliphatic carboxylate H+ symporter, transporting formate, acetate and propionate, and functioning primarily as an acetate uptake permease.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3Q7K_H 3KLY_E 3KLZ_A 3TDX_C 3TE2_B 3TDS_B 3TDR_E 3TDO_C 3TE1_B 3TDP_C ....
Probab=73.16 E-value=59 Score=27.88 Aligned_cols=142 Identities=14% Similarity=0.125 Sum_probs=78.9
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhhhcccccCcCCCCCchHHHHHHHHHHHHHHHHHHhcCCCcccchHHHHHHHHhC
Q 025817 14 LGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGG 93 (247)
Q Consensus 14 ~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSGah~NPavTl~~~l~g 93 (247)
.+..|-++.-+++-+.+-+............. +.+++..-+..++.+++++...+..-+..- --|-.......+.|
T Consensus 18 ~~~~~~~~~~~lAG~~ig~g~~~~~~v~~~~~--~~~~g~~~l~~g~~F~~Gl~lIv~~g~eLf--Tgn~~~~~~~~~~~ 93 (250)
T PF01226_consen 18 RPPSKLFLRGILAGAFIGFGALLSLVVAAGFG--AENPGLAKLVGGLVFPIGLVLIVFLGGELF--TGNMMVMTLALLNK 93 (250)
T ss_dssp HCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCT--TSTHHHHHHHHHHHHTHHHHHHHHHT---T--TTTCHHHHHHHCTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC--cCCccHHHHHHHHHHHHHHHHHHHhcchhc--ccchHHHHHHHHcC
Confidence 33444445555555544444333322222221 111223345567777777777766655543 22555455566778
Q ss_pred CCCcchhHHHHHHHhHHHHHHHHHHHHHhcCCc--C--ccc--------ccCCCCchhHHHHHHHHHHHHHHHHHHhh
Q 025817 94 QITILTGIFYWIAQLLGSIVASFLLKVVTGGLA--V--PTH--------NVAAGVGAIEGVVMEIIITFGLVYTVYAT 159 (247)
Q Consensus 94 ~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~--~--~~~--------~~~~~~~~~~~~~~E~~~T~~l~~~il~~ 159 (247)
|.+|++.+--|.-=.+|-++|+++.-++..... . +.. ...-+.+.++.|+-=.+|.++.++.+...
T Consensus 94 ~~~~~~~l~~w~~v~~gNliG~~~~a~l~~~~~~~~~~~~~~~~~~~~a~~K~~~~~~~~f~~gI~cN~lVclav~~~ 171 (250)
T PF01226_consen 94 RISWKKLLRNWGIVYLGNLIGALLFAYLFAFSGGFMSSPAMGEYLISVAEHKVSHTFWELFFRGILCNWLVCLAVWLA 171 (250)
T ss_dssp SSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTGGGTTTHHHHHHHHHHHCCSSS-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999888888888888888777655432110 0 000 01123467788888888888888888765
No 36
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=43.68 E-value=7.6 Score=29.28 Aligned_cols=18 Identities=33% Similarity=0.538 Sum_probs=16.1
Q ss_pred CCcccchHHHHHHHHhCC
Q 025817 77 SGGHVNPAVTFGLALGGQ 94 (247)
Q Consensus 77 SGah~NPavTl~~~l~g~ 94 (247)
|+||+||.+.++-.+.++
T Consensus 8 t~Ghv~P~lala~~L~~r 25 (139)
T PF03033_consen 8 TRGHVYPFLALARALRRR 25 (139)
T ss_dssp SHHHHHHHHHHHHHHHHT
T ss_pred ChhHHHHHHHHHHHHhcc
Confidence 679999999999999864
No 37
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=34.01 E-value=18 Score=32.57 Aligned_cols=20 Identities=30% Similarity=0.325 Sum_probs=16.9
Q ss_pred hcCCCcccchHHHHHHHHhC
Q 025817 74 ANISGGHVNPAVTFGLALGG 93 (247)
Q Consensus 74 ~~iSGah~NPavTl~~~l~g 93 (247)
+.=||||+.||+.++-.+..
T Consensus 8 ~GGTGGHi~Pala~a~~l~~ 27 (352)
T PRK12446 8 GGGSAGHVTPNLAIIPYLKE 27 (352)
T ss_pred cCCcHHHHHHHHHHHHHHHh
Confidence 44579999999999988874
No 38
>PF09163 Form-deh_trans: Formate dehydrogenase N, transmembrane; InterPro: IPR015246 The transmembrane domain of the beta subunit of formate dehydrogenase consists of a single transmembrane helix. This domain acts as a transmembrane anchor, allowing the conduction of electrons within the protein []. ; PDB: 1KQG_B 1KQF_B.
Probab=20.90 E-value=1.3e+02 Score=18.60 Aligned_cols=24 Identities=8% Similarity=-0.108 Sum_probs=11.5
Q ss_pred chHHHHHHHHHHHhhcCCCCCCCC
Q 025817 221 LIGGGLAGLIYGNVFMHSEHAPLS 244 (247)
Q Consensus 221 ~~Ga~~a~~~~~~~~~~~~~~~~~ 244 (247)
+.++++++++.+...-|+..++++
T Consensus 20 ~~~~~~~~~~Hyi~vGPn~v~ee~ 43 (44)
T PF09163_consen 20 MGATAAAGFFHYITVGPNRVEEED 43 (44)
T ss_dssp HHHHHHHHHHHHHHH--B-S-SST
T ss_pred HHHHHHHHHHHHhhcCCCCCCcCC
Confidence 445556666665556666665554
No 39
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=20.27 E-value=1e+02 Score=29.18 Aligned_cols=30 Identities=17% Similarity=0.195 Sum_probs=25.5
Q ss_pred CCceeeeecccchHHHHHHHHHHHhhcCCC
Q 025817 210 FQDNWIYWVGPLIGGGLAGLIYGNVFMHSE 239 (247)
Q Consensus 210 ~~~~wvy~iap~~Ga~~a~~~~~~~~~~~~ 239 (247)
..|.|-|++.+.+|.+++.+..-+...|+.
T Consensus 185 ~~Wr~af~~~avl~vi~~~L~~~f~~eP~r 214 (493)
T KOG1330|consen 185 FWWRWAFRGSAVLGVIVGLLVFLFVREPER 214 (493)
T ss_pred cceEEEEEeehHHHHHHHHHHHhhccCccc
Confidence 348899999999999999999888776665
No 40
>PRK11375 allantoin permease; Provisional
Probab=20.12 E-value=7.4e+02 Score=23.34 Aligned_cols=22 Identities=18% Similarity=0.036 Sum_probs=17.9
Q ss_pred eecccchHHHHHHHHHHHhhcC
Q 025817 216 YWVGPLIGGGLAGLIYGNVFMH 237 (247)
Q Consensus 216 y~iap~~Ga~~a~~~~~~~~~~ 237 (247)
|..+.+.|-++++++|..+.+.
T Consensus 450 ~~~~~~~g~iva~~~Y~~l~~~ 471 (484)
T PRK11375 450 SRVSWFVGVIVAFVAYALLKKR 471 (484)
T ss_pred hhhhHHHHHHHHHHHHHHHHhh
Confidence 5678889999999999877543
Done!