Query 025817
Match_columns 247
No_of_seqs 206 out of 1398
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 18:14:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025817.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025817hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3gd8_A Aquaporin-4; proton exc 100.0 1.4E-53 4.8E-58 358.4 19.2 220 14-237 1-223 (223)
2 3iyz_A Aquaporin-4; water tran 100.0 3.8E-53 1.3E-57 371.3 20.3 227 10-240 45-274 (340)
3 1j4n_A Aquaporin 1; membrane p 100.0 1.7E-52 5.7E-57 361.2 20.4 230 9-239 3-237 (271)
4 2w2e_A AQY1, aquaporin, aquapo 100.0 3.7E-52 1.3E-56 359.7 21.7 231 13-245 41-274 (279)
5 2zz9_A Aquaporin-4; water tran 100.0 2.2E-52 7.6E-57 363.5 19.7 228 8-239 4-234 (301)
6 2b6o_A Aquaporin-0, lens fiber 100.0 1.2E-51 4E-56 354.4 22.6 224 9-240 2-228 (263)
7 3d9s_A Aquaporin-5, AQP-5; aqu 100.0 3.8E-52 1.3E-56 357.6 19.2 225 9-241 4-232 (266)
8 3cn5_A Aquaporin; membrane pro 100.0 4.7E-52 1.6E-56 362.2 14.7 228 8-238 52-290 (304)
9 1ldf_A Glycerol uptake facilit 100.0 1.8E-50 6.1E-55 350.5 18.7 223 12-240 3-260 (281)
10 2o9g_A Aquaporin Z; integral m 100.0 2.6E-50 9E-55 340.9 19.0 216 15-237 3-232 (234)
11 3llq_A Aquaporin Z 2; aquapori 100.0 3.1E-50 1.1E-54 342.9 18.9 217 12-235 25-253 (256)
12 2f2b_A Aquaporin AQPM; protein 100.0 8.1E-50 2.8E-54 340.6 20.4 220 15-236 3-245 (246)
13 3c02_A Aquaglyceroporin; membr 100.0 1.2E-50 4E-55 347.7 10.7 226 12-243 5-250 (258)
14 2f2b_A Aquaporin AQPM; protein 99.7 3.2E-16 1.1E-20 133.1 11.9 104 10-123 137-245 (246)
15 2b6o_A Aquaporin-0, lens fiber 99.6 4.4E-15 1.5E-19 127.1 7.0 102 137-239 8-112 (263)
16 3llq_A Aquaporin Z 2; aquapori 99.5 4.1E-14 1.4E-18 120.3 6.3 101 136-236 27-132 (256)
17 3d9s_A Aquaporin-5, AQP-5; aqu 99.5 4.6E-13 1.6E-17 114.7 11.7 103 12-124 125-228 (266)
18 2o9g_A Aquaporin Z; integral m 99.4 4.1E-13 1.4E-17 113.1 10.5 101 13-124 131-232 (234)
19 3gd8_A Aquaporin-4; proton exc 99.4 5.2E-13 1.8E-17 111.6 10.8 102 11-122 120-221 (223)
20 2w2e_A AQY1, aquaporin, aquapo 99.4 1.1E-12 3.7E-17 113.0 11.5 101 13-123 165-265 (279)
21 3c02_A Aquaglyceroporin; membr 99.4 4.3E-14 1.5E-18 120.7 2.7 101 137-238 8-113 (258)
22 3iyz_A Aquaporin-4; water tran 99.4 8.4E-13 2.9E-17 115.8 10.4 102 12-123 169-270 (340)
23 2zz9_A Aquaporin-4; water tran 99.4 7.8E-13 2.7E-17 114.8 9.8 102 12-123 130-231 (301)
24 1j4n_A Aquaporin 1; membrane p 99.4 1.1E-12 3.9E-17 112.6 9.0 101 14-124 135-235 (271)
25 3cn5_A Aquaporin; membrane pro 99.4 2.3E-13 7.9E-18 118.4 4.4 102 137-238 59-167 (304)
26 1ldf_A Glycerol uptake facilit 99.3 4.4E-12 1.5E-16 109.5 10.1 103 13-123 142-256 (281)
27 3kcu_A Probable formate transp 88.5 6.7 0.00023 33.2 11.8 102 55-159 68-182 (285)
28 3tds_E Formate/nitrite transpo 71.9 42 0.0014 27.9 11.8 105 53-159 62-177 (268)
29 3kly_A Putative formate transp 47.6 1.1E+02 0.0039 25.4 9.2 101 55-159 67-181 (280)
30 3s2u_A UDP-N-acetylglucosamine 45.2 4.4 0.00015 35.0 -0.0 18 77-94 12-29 (365)
31 4fc4_A Nitrite transporter NIR 28.4 2.5E+02 0.0084 23.1 11.8 100 55-159 58-171 (261)
No 1
>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.4e-53 Score=358.37 Aligned_cols=220 Identities=41% Similarity=0.696 Sum_probs=191.8
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhhhcccccCcCCCCCchHHHHHHHHHHHHHHHHHHhcCCCcccchHHHHHHHHhC
Q 025817 14 LGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGG 93 (247)
Q Consensus 14 ~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSGah~NPavTl~~~l~g 93 (247)
++.||++++||+||++|+++++++..... ++.+.+..+++.+++++|+++++.+++++++||+|+|||||+++++.|
T Consensus 1 ~~~~r~~~aEfiGT~~lv~~g~g~~~~~~---~~~~~~~~~~~~ia~~~Gl~v~~~v~~~g~iSGaHlNPAVTla~~~~g 77 (223)
T 3gd8_A 1 QAFWKAVTAEFLAMLIFVLLSLGSTINWG---GTEKPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTR 77 (223)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHTCCTT---TTTSCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcc---cCCCCCCcchHHHHHHHHHHHHHHHheecccccceEcHHHHHHHHHcC
Confidence 46799999999999999999999886431 112234567899999999999999999999999999999999999999
Q ss_pred CCCcchhHHHHHHHhHHHHHHHHHHHHHhcCC---cCcccccCCCCchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCC
Q 025817 94 QITILTGIFYWIAQLLGSIVASFLLKVVTGGL---AVPTHNVAAGVGAIEGVVMEIIITFGLVYTVYATAADPKKGSLGT 170 (247)
Q Consensus 94 ~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~E~~~T~~l~~~il~~~~~~~~~~~~~ 170 (247)
+++|++.+.|+++|++|+++|+.+++.++++. ....+.+.++.+..++++.|+++|++|+++++.+. |+++...+.
T Consensus 78 ~~~~~~~~~Yi~AQ~lGA~~ga~lv~~~~~~~~~~~lg~~~~~~~~s~~~~~~~E~i~Tf~Lv~~i~~~~-~~~~~~~~~ 156 (223)
T 3gd8_A 78 KISIAKSVFYIAAQCLGAIIGAGILYLVTPPSVVGGLGVTMVHGNLTAGHGLLVELIITFQLVFTIFASC-DSKRTDVTG 156 (223)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHTTTTCCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHT-CTTCSCCCS
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHhhcccccccceeeccCCCccCHHHHHHHHHHHHHHHHHHHHHHh-ccccCCccC
Confidence 99999999999999999999999999887532 23345566778899999999999999999999984 444433445
Q ss_pred hhHHHHHHHHHHHHHhhcCCCCCccCchhhhhhhcCcCCCCceeeeecccchHHHHHHHHHHHhhcC
Q 025817 171 IAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWVGPLIGGGLAGLIYGNVFMH 237 (247)
Q Consensus 171 ~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~~~~~~~~~wvy~iap~~Ga~~a~~~~~~~~~~ 237 (247)
..|+.||+.+...+...++.||++||||||||||++.++|+++|+||++|++|+++++++|++++.|
T Consensus 157 ~~pl~iGl~v~~~~~~g~~~TG~a~NPAR~~GP~l~~~~w~~~Wvy~vgP~~Ga~la~~~y~~~~~p 223 (223)
T 3gd8_A 157 SIALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGGLYEYVFCP 223 (223)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTCCTTTTHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CccHHHHHHHHHHHHhccCCccccccHHHHHHHHHHhcCCCcEEeehhHHHHHHHHHHHHHHHHcCC
Confidence 7899999999888888878899999999999999999999999999999999999999999998764
No 2
>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus}
Probab=100.00 E-value=3.8e-53 Score=371.26 Aligned_cols=227 Identities=40% Similarity=0.691 Sum_probs=196.0
Q ss_pred CcCChhhHHHHHHHHHHHHHHHHHHHHHhhhhcccccCcCCCCCchHHHHHHHHHHHHHHHHHHhcCCCcccchHHHHHH
Q 025817 10 DSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGL 89 (247)
Q Consensus 10 ~~~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSGah~NPavTl~~ 89 (247)
+..+++++|++++||+|||+|+|+++++++... +.....+.+++.+++++|+++++.+++++++||||+|||||+++
T Consensus 45 ~~~~~~l~r~~lAEflGT~lLV~~G~Gs~a~~~---~~~~~~~~g~l~Iala~GlaV~~~v~~~g~ISGAHlNPAVTlal 121 (340)
T 3iyz_A 45 GVWTQAFWKAVTAEFLAMLIFVLLSVGSTINWG---GSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAM 121 (340)
T ss_pred hhchHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---cCCCCCCcchHHHHHHHHHHHHHheeEeeccCcCeeChHHHHHH
Confidence 334567899999999999999999999887431 11122446788999999999999999999999999999999999
Q ss_pred HHhCCCCcchhHHHHHHHhHHHHHHHHHHHHHhcCCc---CcccccCCCCchhHHHHHHHHHHHHHHHHHHhhccCCCCC
Q 025817 90 ALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLA---VPTHNVAAGVGAIEGVVMEIIITFGLVYTVYATAADPKKG 166 (247)
Q Consensus 90 ~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~E~~~T~~l~~~il~~~~~~~~~ 166 (247)
++.|+++|.+++.|+++|++||++|+.+++.++++.. ...+.+.++.+..++++.|+++||+|+++++++. |+++.
T Consensus 122 ~l~G~~~~~~~~~YiiAQ~lGA~~GA~lv~~~~~~~~~~~lg~~~~~~~~s~~~~f~~E~i~Tf~Lv~~Ila~~-d~~~~ 200 (340)
T 3iyz_A 122 VCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASC-DDKRT 200 (340)
T ss_pred HHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcchhhcCceeeccCCCccCHHHHHHHHHHHHHHHHHHHHHhh-cCccC
Confidence 9999999999999999999999999999998876432 2334556677899999999999999999999984 44433
Q ss_pred CCCChhHHHHHHHHHHHHHhhcCCCCCccCchhhhhhhcCcCCCCceeeeecccchHHHHHHHHHHHhhcCCCC
Q 025817 167 SLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWVGPLIGGGLAGLIYGNVFMHSEH 240 (247)
Q Consensus 167 ~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~~~~~~~~~wvy~iap~~Ga~~a~~~~~~~~~~~~~ 240 (247)
......|+.||+++.+.+..++++||++|||||||||+++.++|+++|+||++|++|+++|+++|++++.|..+
T Consensus 201 ~~~~~~pl~IGl~v~i~~~~g~~~TG~amNPARdlGPal~~~~w~~~WVywvgPiiGailaallY~~l~~p~~~ 274 (340)
T 3iyz_A 201 DVTGSVALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGALYEYVFCPDVE 274 (340)
T ss_pred CcccchhhHHHHHHHHHHHhccCCccccccHHHHHHHHHHccCCCcEeehhHHHHHHHHHHHHHHHHHhCCChh
Confidence 33457899999999888888889999999999999999999999999999999999999999999999877543
No 3
>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A
Probab=100.00 E-value=1.7e-52 Score=361.19 Aligned_cols=230 Identities=39% Similarity=0.642 Sum_probs=196.9
Q ss_pred CCcCChhhHHHHHHHHHHHHHHHHHHHHHhhhhcccc--cCcCCCCCchHHHHHHHHHHHHHHHHHHhcCCCcccchHHH
Q 025817 9 DDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMT--ADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVT 86 (247)
Q Consensus 9 ~~~~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSGah~NPavT 86 (247)
+|.++++++|++++||+||++|+|+++++........ +.......+++.+++++|+++++.+++++++||||+|||||
T Consensus 3 ~e~~~~~~~r~~~aEflGT~llv~~g~g~~~~~~~~~~~~~~~g~~~~~~~ial~~Gl~v~~~i~~~g~iSGaHlNPAVT 82 (271)
T 1j4n_A 3 SEFKKKLFWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVT 82 (271)
T ss_dssp STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCCCSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCcccchHHHHHHHHHHHHHHHHHHhcCCcceEcHHHH
Confidence 5667788999999999999999999999886543211 11112234688999999999999999999999999999999
Q ss_pred HHHHHhCCCCcchhHHHHHHHhHHHHHHHHHHHHHhcCC---cCcccccCCCCchhHHHHHHHHHHHHHHHHHHhhccCC
Q 025817 87 FGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGL---AVPTHNVAAGVGAIEGVVMEIIITFGLVYTVYATAADP 163 (247)
Q Consensus 87 l~~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~E~~~T~~l~~~il~~~~~~ 163 (247)
+++++.|+++|++++.|+++|++|+++|+.+++.++.+. ....+.+.++.+..++++.|+++|++|+++++++ .|+
T Consensus 83 la~~~~g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~E~i~T~~Lv~~i~~~-~d~ 161 (271)
T 1j4n_A 83 LGLLLSCQISVLRAIMYIIAQCVGAIVATAILSGITSSLPDNSLGLNALAPGVNSGQGLGIEIIGTLQLVLCVLAT-TDR 161 (271)
T ss_dssp HHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHTTTCTTCCTTCCCCCTTCCTTGGGHHHHHHHHHHHHHHHHH-TCS
T ss_pred HHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHccCCcccccccccCCCccchHHHHHHHHHHHHHHHHHHHhh-ccc
Confidence 999999999999999999999999999999999988532 2233445667788899999999999999999987 455
Q ss_pred CCCCCCChhHHHHHHHHHHHHHhhcCCCCCccCchhhhhhhcCcCCCCceeeeecccchHHHHHHHHHHHhhcCCC
Q 025817 164 KKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWVGPLIGGGLAGLIYGNVFMHSE 239 (247)
Q Consensus 164 ~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~~~~~~~~~wvy~iap~~Ga~~a~~~~~~~~~~~~ 239 (247)
++...+.+.|+.||+.+...+..++++||+++||||||||+++.++|+++|+||++|++|+++++++|++++.++.
T Consensus 162 ~~~~~~~~~pl~IGl~v~~~~~~~~~~TG~a~NPAR~~Gpal~~~~~~~~wv~~vgP~~Ga~la~~~y~~~~~~~~ 237 (271)
T 1j4n_A 162 RRRDLGGSGPLAIGFSVALGHLLAIDYTGCGINPARSFGSSVITHNFQDHWIFWVGPFIGAALAVLIYDFILAPRS 237 (271)
T ss_dssp SCCCCCSCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHTTCCTTTTHHHHHHHHHHHHHHHHHHTTTSCCS
T ss_pred cCCCccccHHHHHHHHHHHHHHhccCCCccccChHHHHHHHHHhCCCcceeHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 4433456899999999998888888899999999999999999999999999999999999999999999987654
No 4
>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A*
Probab=100.00 E-value=3.7e-52 Score=359.71 Aligned_cols=231 Identities=31% Similarity=0.469 Sum_probs=195.0
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHhhh-hccc-ccCcCCCCCchHHHHHHHHHHHHHHHHHHhcCCCcccchHHHHHHH
Q 025817 13 SLGSFKAYLAEFISTLLFVFAGVGSAIA-FNKM-TADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLA 90 (247)
Q Consensus 13 ~~~~~~~~~~EfigT~~lv~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSGah~NPavTl~~~ 90 (247)
-++.+|++++||+||++|+|+++++... .... .++......+++.+++++|+++++.+++++++||||+|||||++++
T Consensus 41 ~~~~~r~~laEfiGT~~Lv~~g~g~~~~~~~~~~~~~~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~ 120 (279)
T 2w2e_A 41 VRNHFIAMSGEFVGTFLFLWSAFVIAQIANQAPETPDGGSNPAQLIMISFGFGFGVMVGVFITYRVSGGNLNPAVTLALV 120 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCGGGCCCHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCccHHHHHHHHHHHHHHHHHHHhhcCccccChHHHHHHH
Confidence 3467899999999999999999986422 1111 1111123346788999999999999999999999999999999999
Q ss_pred HhCCCCcchhHHHHHHHhHHHHHHHHHHHHHhcCCcCcccccCCCCchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCC
Q 025817 91 LGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNVAAGVGAIEGVVMEIIITFGLVYTVYATAADPKKGSLGT 170 (247)
Q Consensus 91 l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~l~~~il~~~~~~~~~~~~~ 170 (247)
+.|+++|++++.|+++|++|+++|+.+++.++++.......+.++.+..++++.|+++|++|+++++.++.++++ .+.
T Consensus 121 ~~g~~~~~~~~~YiiAQ~lGA~~ga~lv~~~~~~~~~~~t~~~~~~s~~~~~~~E~i~Tf~Lv~~Il~~~~~~~~--~~~ 198 (279)
T 2w2e_A 121 LARAIPPFRGILMAFTQIVAGMAAAGAASAMTPGEIAFANALGGGASRTRGLFLEAFGTAILCLTVLMLAVEKHR--ATW 198 (279)
T ss_dssp HTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCSSCCCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHTTSCST--TGG
T ss_pred HcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHccccceeeccCCccccHHHHHHHHHHHHHHHHHHHHHHccCCCC--CcC
Confidence 999999999999999999999999999999987544333344556788999999999999999999998655442 345
Q ss_pred hhHHHHHHHHHHHHHhhcCCCCCccCchhhhhhhcCcCCC-CceeeeecccchHHHHHHHHHHHhhcCCCCCCCCC
Q 025817 171 IAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNF-QDNWIYWVGPLIGGGLAGLIYGNVFMHSEHAPLSN 245 (247)
Q Consensus 171 ~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~~~~~~-~~~wvy~iap~~Ga~~a~~~~~~~~~~~~~~~~~~ 245 (247)
+.|+.||+.+.+..++.++.||++|||||||||+++.+.| +++|+||++|++|+++++++|+++...+.++..|.
T Consensus 199 ~~pl~IGl~v~~~~l~~g~~TG~s~NPAR~~GPal~~~~~~~~~WVy~vgPiiGa~la~~ly~~l~~~~~~~~~p~ 274 (279)
T 2w2e_A 199 FAPFVIGIALLIAHLICIYYTGAGLNPARSFGPAVAARSFPNYHWIYWLGPILGAFLAYSIWQMWKWLNYQTTNPG 274 (279)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHHTCCCTTTTHHHHHHHHHHHHHHHHHHHHHHTTTTCSCC-
T ss_pred cHHHHHHHHHHHHHHhcccccccccChHHHHHHHHHhccchhhhhHHHHHHHHHHHHHHHHHHHHHccCCCcCCCC
Confidence 8999999999999999999999999999999999998765 68999999999999999999999988777665543
No 5
>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A
Probab=100.00 E-value=2.2e-52 Score=363.48 Aligned_cols=228 Identities=40% Similarity=0.696 Sum_probs=193.8
Q ss_pred cCCcCChhhHHHHHHHHHHHHHHHHHHHHHhhhhcccccCcCCCCCchHHHHHHHHHHHHHHHHHHhcCCCcccchHHHH
Q 025817 8 FDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTF 87 (247)
Q Consensus 8 ~~~~~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSGah~NPavTl 87 (247)
.++..+++++|++++||+|||+|+|+++++.+.... .......+++.+++++|+++++.+++++++||||+|||||+
T Consensus 4 ~~~~~~~~~~r~~lAEflGT~lLv~~g~Gs~~~~~~---~~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTl 80 (301)
T 2zz9_A 4 FKGVWTQAFWKAVTAEFLAMLIFVLLSVGSTINWGG---SENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTV 80 (301)
T ss_dssp ----CCHHHHHHHHHHHHHHHHHHHHHHTTSCCTTC---C-CCCCCCHHHHHHHHHHHHHHHHHHHGGGTCCCCSHHHHH
T ss_pred ccccccHHHHHHHHHHHHHHHHHHHHHHHHHhcccc---CCCCCCcchHHHHHHHHHHHHHhhheeccCCcceeChHHHH
Confidence 467778999999999999999999999998764331 11223467889999999999999999999999999999999
Q ss_pred HHHHhCCCCcchhHHHHHHHhHHHHHHHHHHHHHhcCCc---CcccccCCCCchhHHHHHHHHHHHHHHHHHHhhccCCC
Q 025817 88 GLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLA---VPTHNVAAGVGAIEGVVMEIIITFGLVYTVYATAADPK 164 (247)
Q Consensus 88 ~~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~E~~~T~~l~~~il~~~~~~~ 164 (247)
++++.|+++|++++.|+++|++|+++|+.+++.++++.. ...+.+.++.+..++++.|+++||+|+++++++. |++
T Consensus 81 a~~~~g~~~~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~~~~~~~g~~~~~~~~s~~~~f~~E~i~Tf~Lv~~Il~~~-d~~ 159 (301)
T 2zz9_A 81 AMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASC-DDK 159 (301)
T ss_dssp HHHHTSSSCTTTTHHHHHHHHHHHHHHHHHHHTTSCSCGGGTSSCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHS-CSS
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCceeeecCCcccchHHHHHHHHHHHHHHHHHHHHhc-CCC
Confidence 999999999999999999999999999999999886432 2234455667889999999999999999999984 444
Q ss_pred CCCCCChhHHHHHHHHHHHHHhhcCCCCCccCchhhhhhhcCcCCCCceeeeecccchHHHHHHHHHHHhhcCCC
Q 025817 165 KGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWVGPLIGGGLAGLIYGNVFMHSE 239 (247)
Q Consensus 165 ~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~~~~~~~~~wvy~iap~~Ga~~a~~~~~~~~~~~~ 239 (247)
+.......|+.||+.+.+.+..+++.||+++||||||||+++.++|+++|+||++|++|+++|+++|++++.++.
T Consensus 160 ~~~~~~~~pl~IGl~v~i~~~~g~~~TG~a~NPAR~~GPal~~~~w~~~WVy~vgPiiGailaa~ly~~l~~~~~ 234 (301)
T 2zz9_A 160 RTDVTGSVALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGALYEYVFCPDV 234 (301)
T ss_dssp SSCCSSCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCTTTTHHHHHHHHHHHHHHHHHHTTTC---
T ss_pred CCCccchHhHHHHHHHHHHHHHhcCCcccccCcHHHHHHHHHhCCCcceeeeeeHHHHHHHHHHHHHHHHhCCch
Confidence 333355889999999988888888899999999999999999999999999999999999999999999986543
No 6
>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A*
Probab=100.00 E-value=1.2e-51 Score=354.44 Aligned_cols=224 Identities=35% Similarity=0.642 Sum_probs=196.3
Q ss_pred CCcCChhhHHHHHHHHHHHHHHHHHHHHHhhhhcccccCcCCCCCchHHHHHHHHHHHHHHHHHHhcCCCcccchHHHHH
Q 025817 9 DDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFG 88 (247)
Q Consensus 9 ~~~~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSGah~NPavTl~ 88 (247)
+|.++++.+|++++||+|||+|+++++++.... ...+.+++.+++++|+++++.+++++++||+|+|||||++
T Consensus 2 ~e~~~~~~~~~~laEfiGT~~Lv~~g~g~~~~~-------~~~~~~~l~i~l~~Gl~v~~~i~~~g~iSGahlNPAVTla 74 (263)
T 2b6o_A 2 WELRSASFWRAIFAEFFATLFYVFFGLGASLRW-------APGPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFA 74 (263)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHHHHHHSCC-------CSSSCHHHHHHHHHHHHHHHHHHHGGGTTCCCCSHHHHHH
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHHHHhcC-------CCCCcchHHHHHHHHHHHHHHHHHhhccCcCeeChHHHHH
Confidence 467788899999999999999999999987421 1133467889999999999999999999999999999999
Q ss_pred HHHhCCCCcchhHHHHHHHhHHHHHHHHHHHHHhcCC---cCcccccCCCCchhHHHHHHHHHHHHHHHHHHhhccCCCC
Q 025817 89 LALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGL---AVPTHNVAAGVGAIEGVVMEIIITFGLVYTVYATAADPKK 165 (247)
Q Consensus 89 ~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~E~~~T~~l~~~il~~~~~~~~ 165 (247)
+++.|+++|.+++.|+++|++|+++|+.+++.++++. ..+.+.+.++.+..++++.|+++|++|+++++.+ .|+++
T Consensus 75 ~~~~g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~i~Tf~Lv~~il~~-~d~~~ 153 (263)
T 2b6o_A 75 FLVGSQMSLLRAICYVVAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHPGVSVGQATIVEIFLTLQFVLCIFAT-YDERR 153 (263)
T ss_dssp HHHTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHSCTTTCSSCSCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-SCTTS
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccCCccccHHHHHHHHHHHHHHHHHHHHHH-hcccC
Confidence 9999999999999999999999999999999998642 2334556677889999999999999999999998 55554
Q ss_pred CCCCChhHHHHHHHHHHHHHhhcCCCCCccCchhhhhhhcCcCCCCceeeeecccchHHHHHHHHHHHhhcCCCC
Q 025817 166 GSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWVGPLIGGGLAGLIYGNVFMHSEH 240 (247)
Q Consensus 166 ~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~~~~~~~~~wvy~iap~~Ga~~a~~~~~~~~~~~~~ 240 (247)
.....+.|+.||+.+.+.+++.+++||++|||||||||+++.++|+++|+||++|++|+++++++|++++.++.+
T Consensus 154 ~~~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~~~~Wvy~vgP~~Ga~la~~~y~~l~~~~~~ 228 (263)
T 2b6o_A 154 NGRLGSVALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRNFTNHWVYWVGPVIGAGLGSLLYDFLLFPRLK 228 (263)
T ss_dssp CSSCCCHHHHHHHHHHHHHHHHTTTSTTCCCHHHHHHHHHHHTCCTTCTHHHHHHHHHHHHHHHHHHTTTSCCSS
T ss_pred CCCcccHHHHHHHHHHHHHHhccCCCcccccHHHHHHHHHHcCCccceeHHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 344568999999999999999999999999999999999999999999999999999999999999999876543
No 7
>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.8e-52 Score=357.61 Aligned_cols=225 Identities=35% Similarity=0.608 Sum_probs=197.2
Q ss_pred CCcCChhhHHHHHHHHHHHHHHHHHHHHHhhhhcccccCcCCCCCchHHHHHHHHHHHHHHHHHHhcCCCcccchHHHHH
Q 025817 9 DDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFG 88 (247)
Q Consensus 9 ~~~~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSGah~NPavTl~ 88 (247)
+|.++++++|++++||+||++|+|+++++.... . ....+++.+++++|+++++.+++++++||||+|||||++
T Consensus 4 ~e~~~~~~~r~~laEfiGT~~lv~~g~g~~~~~---~----~~~~~~l~ial~~Glav~~~i~~~g~iSGaHlNPAVTla 76 (266)
T 3d9s_A 4 KEVCSVAFLKAVFAEFLATLIFVFFGLGSALKW---P----SALPTILQIALAFGLAIGTLAQALGPVSGGHINPAITLA 76 (266)
T ss_dssp HHHTSHHHHHHHHHHHHHHHHHHHHHHHHHSCC---S----SSCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
T ss_pred hhhhChHHHHHHHHHHHHHHHHHHHHHHHHhCC---C----CCCccHHHHHHHHHHHHHHHHHHHcccCcceECHHHHHH
Confidence 466788999999999999999999999987421 1 123568889999999999999999999999999999999
Q ss_pred HHHhCCCCcchhHHHHHHHhHHHHHHHHHHHHHhcCC---cCcccccCCCCchhHHHHHHHHHHHHHHHHHHhhccCCCC
Q 025817 89 LALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGL---AVPTHNVAAGVGAIEGVVMEIIITFGLVYTVYATAADPKK 165 (247)
Q Consensus 89 ~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~E~~~T~~l~~~il~~~~~~~~ 165 (247)
+++.|+++|++++.|+++|++|+++|+.+++.++++. ..+.+.+.++.+..++++.|+++|++|+++++.+ .|+++
T Consensus 77 ~~~~g~~~~~~~~~Yi~AQ~lGA~~ga~l~~~~~~~~~~~~~g~~~~~~~~s~~~~~~~E~i~Tf~Lv~~il~~-~d~~~ 155 (266)
T 3d9s_A 77 LLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNARGNLAVNALNNNTTQGQAMVVELILTFQLALCIFAS-TDSRR 155 (266)
T ss_dssp HHHTSSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHTTTTCCCCCTTSCHHHHHHHHHHHHHHHHHHHHHH-HCTTC
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHccccccCceeeccCCccccHHHHHHHHHHHHHHHHHHHHHH-hcccC
Confidence 9999999999999999999999999999999988532 1233445566788999999999999999999998 45554
Q ss_pred CCCCChhHHHHHHHHHHHHHhhcCCCCCccCchhhhhhhcCcCCCCc-eeeeecccchHHHHHHHHHHHhhcCCCCC
Q 025817 166 GSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQD-NWIYWVGPLIGGGLAGLIYGNVFMHSEHA 241 (247)
Q Consensus 166 ~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~~~~~~~~-~wvy~iap~~Ga~~a~~~~~~~~~~~~~~ 241 (247)
...+...|+.||+.+.+.++.++++||+++||||||||+++.++|++ +|+||++|++|+++++++|++++.|+.++
T Consensus 156 ~~~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~~~~~Wvy~vgP~~Ga~la~~~y~~l~~~~~~~ 232 (266)
T 3d9s_A 156 TSPVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILYFYLLFPNSLS 232 (266)
T ss_dssp CSCCCCHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHTCCCTTHHHHHHHHHHHHHHHHHHHHHTTSCCSCC
T ss_pred CCccchHHHHHHHHHHHHHHHhhccccccccHHHHHHHHHHcCCcccCEeeeehHHHHHHHHHHHHHHHHhCCCchh
Confidence 44456899999999999999999999999999999999999999998 99999999999999999999998775543
No 8
>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A
Probab=100.00 E-value=4.7e-52 Score=362.21 Aligned_cols=228 Identities=41% Similarity=0.636 Sum_probs=193.1
Q ss_pred cCCcCChhhHHHHHHHHHHHHHHHHHHHHHhhhhcccccCcCCCCCchHHHHHHHHHHHHHHHHHHhcCCCcccchHHHH
Q 025817 8 FDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTF 87 (247)
Q Consensus 8 ~~~~~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSGah~NPavTl 87 (247)
.+|..+.+++|++++||+||++|+|+++++........+ .....+++.+++++|+++++.+++++++||||+|||||+
T Consensus 52 ~~e~~~~~~~r~~lAEfiGT~lLv~~g~gsv~~~~~~~~--~~~~~g~l~iala~Glav~~~v~~~g~iSGaHlNPAVTl 129 (304)
T 3cn5_A 52 LGELKLWSFWRAAIAEFIATLLFLYITVATVIGHSKETV--VCGSVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTF 129 (304)
T ss_dssp ---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCS--TTCSCHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHH
T ss_pred ccccccHHHHHHHHHHHHHHHHHHHHHhHHHeEeccccC--CCCCCCceeehhhhhhhhheeeeEeeccCCCccCcHHHH
Confidence 356667788999999999999999999998865432221 123467889999999999999999999999999999999
Q ss_pred HHHHhCCCCcchhHHHHHHHhHHHHHHHHHHHHHhcCC----cCcccccCCCCchhHHHHHHHHHHHHHHHHHHhhccCC
Q 025817 88 GLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGL----AVPTHNVAAGVGAIEGVVMEIIITFGLVYTVYATAADP 163 (247)
Q Consensus 88 ~~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~E~~~T~~l~~~il~~~~~~ 163 (247)
++++.|+++|++++.|+++|++|+++|+.+++.++++. ..+...+.++.+..++++.|+++||+|+++++.. .|+
T Consensus 130 a~~l~g~~~~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~~~~~~~~g~~~~~~~~s~~~~f~~E~i~TfiLv~~Il~~-~d~ 208 (304)
T 3cn5_A 130 GLFLARKVELLRALVYMIAQCLGAICGVGLVKAFMKGPYNQFGGGANSVALGYNKGTALGAEIIGTFVLVYTVFSA-TDP 208 (304)
T ss_dssp HHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHTTTTCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHT-EEE
T ss_pred HHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcccccCCCccHHHHHHHHHHHHHHHHHHHhhe-ecC
Confidence 99999999999999999999999999999999887531 1122234566788999999999999999999976 444
Q ss_pred CCCCCCC----hhHHHHHHHHHHHHHhhcCCCCCccCchhhhhhhcC---cCCCCceeeeecccchHHHHHHHHHHHhhc
Q 025817 164 KKGSLGT----IAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVA---SGNFQDNWIYWVGPLIGGGLAGLIYGNVFM 236 (247)
Q Consensus 164 ~~~~~~~----~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~~---~~~~~~~wvy~iap~~Ga~~a~~~~~~~~~ 236 (247)
++...+. +.|+.||+++.+..++.+++||+++|||||||||++ .++|+++|+||++|++|+++++++|++++.
T Consensus 209 ~~~~~~~~~~~lapl~IGl~V~~~~l~~g~~TG~amNPAR~~GPal~~~~~~~w~~~WvywvgPiiGa~laa~~y~~l~~ 288 (304)
T 3cn5_A 209 KRSARDSHVPILAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIFNSNKVWDDQWIFWVGPFIGAAVAAAYHQYVLR 288 (304)
T ss_dssp EEESTTSCCEEECHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHCCHHHHHHTTHHHHHHHHHHHHHHHHHHTTSC
T ss_pred ccCCCCcccccchHHHHHHHHHHHHHhccCCCccccChHHHHHHHHHHccCCCcCceEEEeehHHHHHHHHHHHHHHHhC
Confidence 3322222 789999999999999999999999999999999998 568999999999999999999999999977
Q ss_pred CC
Q 025817 237 HS 238 (247)
Q Consensus 237 ~~ 238 (247)
++
T Consensus 289 ~~ 290 (304)
T 3cn5_A 289 AA 290 (304)
T ss_dssp CC
T ss_pred CC
Confidence 65
No 9
>1ldf_A Glycerol uptake facilitator protein; glycerol-conducting membrane channel protein, transport PROT; HET: BOG; 2.10A {Escherichia coli} SCOP: f.19.1.1 PDB: 1fx8_A* 1lda_A* 1ldi_A*
Probab=100.00 E-value=1.8e-50 Score=350.54 Aligned_cols=223 Identities=27% Similarity=0.408 Sum_probs=184.4
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHhhhhcccccCcCCCCCchHHHHHHHHHHHHHHHHHHhcCCCcccchHHHHHHHH
Q 025817 12 FSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLAL 91 (247)
Q Consensus 12 ~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSGah~NPavTl~~~l 91 (247)
++++++|++++||+|||+|+|+++++...... .+ ...+...+++++|+++++.+++++++||||+|||||+++++
T Consensus 3 ~~~~~~~~~laEflGT~~Lv~~G~g~~~~~~l-~~----~~~g~~~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~ 77 (281)
T 1ldf_A 3 QTSTLKGQCIAEFLGTGLLIFFGVGCVAALKV-AG----ASFGQWEISVIFGLGVAMAIYLTAGVSGAHLNPAVTIALWL 77 (281)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHHHHHHHH-SC----CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cC----CCCchHHHHHHHHHHHHHHhheecccCcCeeChHHHHHHHH
Confidence 46678999999999999999999988754322 11 12334458999999999999999999999999999999999
Q ss_pred hCCCCcchhHHHHHHHhHHHHHHHHHHHHHhcCCc-------------------Ccccc--cCCCCchhHHHHHHHHHHH
Q 025817 92 GGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLA-------------------VPTHN--VAAGVGAIEGVVMEIIITF 150 (247)
Q Consensus 92 ~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~-------------------~~~~~--~~~~~~~~~~~~~E~~~T~ 150 (247)
.|+++|++++.|+++|++|+++|+.+++.++++.. ...++ +.++.+..++++.|+++|+
T Consensus 78 ~g~~~~~~~~~Yi~AQ~lGA~~ga~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~f~t~p~~~~s~~~~~~~E~i~Tf 157 (281)
T 1ldf_A 78 FACFDKRKVIPFIVSQVAGAFCAAALVYGLYYNLFFDFEQTHHIVRGSVESVDLAGTFSTYPNPHINFVQAFAVEMVITA 157 (281)
T ss_dssp HSCCCTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTSGGGHHHHTTTSCCCCTTCCHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccccccccccccccccceeeccCCccccHHHHHHHHHHHHH
Confidence 99999999999999999999999999988774210 01222 3445788999999999999
Q ss_pred HHHHHHHhhccCCCCCC-CCChhHHHHHHHHHHHHHhhcCCCCCccCchhhhhhhcCcC-------CC------Cceeee
Q 025817 151 GLVYTVYATAADPKKGS-LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASG-------NF------QDNWIY 216 (247)
Q Consensus 151 ~l~~~il~~~~~~~~~~-~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~~~~-------~~------~~~wvy 216 (247)
+|+++++.+. |+++.. .+.+.|+.||+.+....++.++.||++||||||||||++.. .| .++|+|
T Consensus 158 ~Lv~~il~~~-d~~~~~~~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~g~g~~~~~~~~~~~~~WVy 236 (281)
T 1ldf_A 158 ILMGLILALT-DDGNGVPRGPLAPLLIGLLIAVIGASMGPLTGTAMNPARDFGPKVFAWLAGWGNVAFTGGRDIPYFLVP 236 (281)
T ss_dssp HHHHHHHHHH-CTTSSSCCGGGHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHTTTTTHHHHTTCSSCTTHHH
T ss_pred HHHHHHHHHh-ccCCCCcccchHHHHHHHHHHHHHHhcccccccccCcHhhHHHHHHHHhcccccccccccCCCceeeHH
Confidence 9999999985 444322 34589999999999999999999999999999999999741 22 279999
Q ss_pred ecccchHHHHHHHHHHHhhcCCCC
Q 025817 217 WVGPLIGGGLAGLIYGNVFMHSEH 240 (247)
Q Consensus 217 ~iap~~Ga~~a~~~~~~~~~~~~~ 240 (247)
|++|++|+++++++|++++.++.+
T Consensus 237 ~vgPi~Ga~la~~~y~~l~~~~~~ 260 (281)
T 1ldf_A 237 LFGPIVGAIVGAFAYRKLIGRHLP 260 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHTGGGC-
T ss_pred hHHHHHHHHHHHHHHHHHhCccCC
Confidence 999999999999999999876544
No 10
>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A*
Probab=100.00 E-value=2.6e-50 Score=340.94 Aligned_cols=216 Identities=32% Similarity=0.536 Sum_probs=185.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhcccccCcCCCCCchHHHHHHHHHHHHHHHHHHhcCCCcccchHHHHHHHHhCC
Q 025817 15 GSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQ 94 (247)
Q Consensus 15 ~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSGah~NPavTl~~~l~g~ 94 (247)
+++|++++||+||++|+++++++....... +....+++.+++++|+++++.+++++++||+|+|||||+++++.|+
T Consensus 3 ~l~r~~~aEf~GT~~lv~~g~g~~~~~~~~----~~~~~~~l~ia~~~Gl~v~~~i~~~g~iSGaHlNPAVTla~~~~g~ 78 (234)
T 2o9g_A 3 HMFRKLAAESFGTFWLVFGGSGSAVLAAGF----PELGIGFAGVALAFGLTVLTMAFAVGHISGGHFNPAVTIGLWAGGR 78 (234)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHTTTC----TTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcccCC----CCCCcChHHHHHHHHHHHHHHHHHhhccCcceeCHHHHHHHHHhCC
Confidence 468999999999999999999987433211 1133578889999999999999999999999999999999999999
Q ss_pred CCcchhHHHHHHHhHHHHHHHHHHHHHhcCCc-----------CcccccC-CCCchhHHHHHHHHHHHHHHHHHHhhccC
Q 025817 95 ITILTGIFYWIAQLLGSIVASFLLKVVTGGLA-----------VPTHNVA-AGVGAIEGVVMEIIITFGLVYTVYATAAD 162 (247)
Q Consensus 95 ~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~-----------~~~~~~~-~~~~~~~~~~~E~~~T~~l~~~il~~~~~ 162 (247)
++|++++.|+++|++|+++|+.+++.++++.. ....... .+.+..++++.|+++|++|+++++.+ .|
T Consensus 79 ~~~~~~~~Yi~aQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~t~p~~~~~~~~~~~E~i~T~~Lv~~i~~~-~d 157 (234)
T 2o9g_A 79 FPAKEVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGYGEHSPGGYSMLSALVVELVLSAGFLLVIHGA-TD 157 (234)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCCHHHHCTTCCCCGGGSTTCCCHHHHHHHHHHHHHHHHHHHHHH-TS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccccceeeecCCCccchHHHHHHHHHHHHHHHHHHHHh-cC
Confidence 99999999999999999999999998886421 0111112 24678899999999999999999997 45
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHhhcCCCCCccCchhhhhhhcCcCC--CCceeeeecccchHHHHHHHHHHHhhcC
Q 025817 163 PKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGN--FQDNWIYWVGPLIGGGLAGLIYGNVFMH 237 (247)
Q Consensus 163 ~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~~~~~--~~~~wvy~iap~~Ga~~a~~~~~~~~~~ 237 (247)
+|+ .+.+.|+.||+.+....++.+++||+++|||||||||++.++ |+++|+||++|++|+++++++|++++.+
T Consensus 158 ~~~--~~~~~pl~IGl~v~~~~~~~g~~TG~s~NPAR~lGPal~~g~~~~~~~Wv~~vgP~~Ga~la~~~y~~~~~~ 232 (234)
T 2o9g_A 158 KFA--PAGFAPIAIGLACTLIHLISIPVTNTSVNPARSTAVAIFQGGWALEQLWFFWVVPIVGGIIGGLIYRTLLEK 232 (234)
T ss_dssp TTS--CTTCHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHCSHHHHSHHHHHHHHHHHHHHHHHHHHHHTSC
T ss_pred CCC--ccchHHHHHHHHHHHHHHHccCCCccccChHHHHHHHHHhCCCCCceeeeeehHHhHHHHHHHHHHHHHcCC
Confidence 443 345899999999999999999999999999999999999775 4599999999999999999999999654
No 11
>3llq_A Aquaporin Z 2; aquaporin tetramer, membrane protein, water channel, structu genomics, PSI-2, protein structure initiative; 2.01A {Agrobacterium tumefaciens str}
Probab=100.00 E-value=3.1e-50 Score=342.95 Aligned_cols=217 Identities=31% Similarity=0.500 Sum_probs=183.7
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHhhhhcccccCcCCCCCchHHHHHHHHHHHHHHHHHHhcCCCcccchHHHHHHHH
Q 025817 12 FSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLAL 91 (247)
Q Consensus 12 ~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSGah~NPavTl~~~l 91 (247)
.+++++|++++||+||++|+++++++.......+ ....+++.+++++|+++++.+++++++||||+|||||+++++
T Consensus 25 ~~~~l~r~~laEflGT~lLv~~G~G~~~~~~~~~----~~~~~~l~iala~Glav~~~i~~~g~iSGaHlNPAVTla~~~ 100 (256)
T 3llq_A 25 QSYVMGRKLLAEFFGTFWLVFGGCGSAVFAAAFP----ELGIGFTGVALAFGLTVLTMAYAVGGISGGHFNPAVSVGLTV 100 (256)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHHHHHTTCT----TTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC----CCCccHHHHHHHHHHHHHHHHheeeccccceEchHHHHHHHH
Confidence 3567799999999999999999999875433221 234578899999999999999999999999999999999999
Q ss_pred hCCCCcchhHHHHHHHhHHHHHHHHHHHHHhcCCc---------CcccccCC-CCchhHHHHHHHHHHHHHHHHHHhhcc
Q 025817 92 GGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLA---------VPTHNVAA-GVGAIEGVVMEIIITFGLVYTVYATAA 161 (247)
Q Consensus 92 ~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~---------~~~~~~~~-~~~~~~~~~~E~~~T~~l~~~il~~~~ 161 (247)
.|+++|++++.|+++|++|+++|+.+++.++++.. ....+..| ..+..++++.|+++|++|+++++.+ .
T Consensus 101 ~g~~~~~~~~~YiiAQ~lGA~~ga~lv~~~~~~~~~~~~~~~~~~~~~~t~p~~~s~~~~f~~E~i~Tf~Lv~~il~~-~ 179 (256)
T 3llq_A 101 AGRFPASSLVPYVIAQVAGAIVAAAALYVIATGKAGIDLGGFASNGYGEHSPGGYSLVSALLIEIILTAFFLIVILGS-T 179 (256)
T ss_dssp TTSSCGGGHHHHHHHHHHHHHHHHHHHHHHHTTBTTCCCTTTTCCCCGGGSTTCCCHHHHHHHHHHHHHHHHHHHHHH-H
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccccccccccccccccCCcccCHHHHHHHHHHHHHHHHHHHHHh-c
Confidence 99999999999999999999999999998874321 01112222 4678899999999999999999987 4
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHhhcCCCCCccCchhhhhhhcCcCC--CCceeeeecccchHHHHHHHHHHHhh
Q 025817 162 DPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGN--FQDNWIYWVGPLIGGGLAGLIYGNVF 235 (247)
Q Consensus 162 ~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~~~~~--~~~~wvy~iap~~Ga~~a~~~~~~~~ 235 (247)
|+++ .+.+.|+.||+.+....++.++.||++||||||||||++.++ |+++|+||++|++|+++++++|+++.
T Consensus 180 d~~~--~~~~~pl~IGl~v~~i~~~~g~~TG~a~NPAR~lGPal~~g~~~~~~~WVy~vgPi~Ga~la~~~y~~l~ 253 (256)
T 3llq_A 180 HGRV--PAGFAPIAIGLALTLIHLISIPVTNTSVNPARSTGQALFVGGWALQQLWLFWLAPIVGGAAGAVIWKLFG 253 (256)
T ss_dssp STTS--CTTCHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHCHHHHHHTTHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCC--CccchhHHHHHHHHHHHHHhccccccccChHHHHHHHHHcCCCcccceeeeeeHHHHHHHHHHHHHHHhc
Confidence 5553 345789999999999999999999999999999999998765 56899999999999999999999983
No 12
>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A*
Probab=100.00 E-value=8.1e-50 Score=340.59 Aligned_cols=220 Identities=34% Similarity=0.457 Sum_probs=187.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhcccccCcC-------C-----CCCchHHHHHHHHHHHHHHHHHHhcCCCcccc
Q 025817 15 GSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAA-------L-----DPSGLVAIAICHGFALFVAVAIGANISGGHVN 82 (247)
Q Consensus 15 ~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~-------~-----~~~~~~~~~l~~g~~v~~~i~~~~~iSGah~N 82 (247)
+++|++++||+||++|+|+++++........+++. . +..+++.+++++|+++++.+++++++||+|+|
T Consensus 3 ~~~~~~~aEfiGT~~lv~~g~g~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~ia~~~Gl~v~~~v~~~g~iSGaH~N 82 (246)
T 2f2b_A 3 SLTKRCIAEFIGTFILVFFGAGSAAVTLMIASGGTSPNPFNIGIGLLGGLGDWVAIGLAFGFAIAASIYALGNISGCHIN 82 (246)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSSTTCCSTTTTTTHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCS
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCccccccccccccccccccchhHHHHHHHHHHHHHhheecccccceeC
Confidence 56899999999999999999998765432221100 0 22346779999999999999999999999999
Q ss_pred hHHHHHHHHhCCCCcchhHHHHHHHhHHHHHHHHHHHHHhcCC---cCccc--ccCCCCchhHHHHHHHHHHHHHHHHHH
Q 025817 83 PAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGL---AVPTH--NVAAGVGAIEGVVMEIIITFGLVYTVY 157 (247)
Q Consensus 83 PavTl~~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~---~~~~~--~~~~~~~~~~~~~~E~~~T~~l~~~il 157 (247)
||||+++++.||++|++.+.|+++|++|+++|+.+++.+++++ ....+ .+.++.+..++++.|+++|++|+++++
T Consensus 83 PAVTla~~~~g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~~~~~t~p~~~~~~~~~~~~E~i~Tf~Lv~~i~ 162 (246)
T 2f2b_A 83 PAVTIGLWSVKKFPGREVVPYIIAQLLGAAFGSFIFLQCAGIGAATVGGLGATAPFPGISYWQAMLAEVVGTFLLMITIM 162 (246)
T ss_dssp HHHHHHHHHTTSSCGGGHHHHHHHHHHHHHHHHHHHHHHHCTHHHHTTGGGCCCCCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhcceeeeccCccccchHHHHHHHHHHHHHHHheee
Confidence 9999999999999999999999999999999999999998752 12222 333567889999999999999999999
Q ss_pred hhccCCCCCCCCChhHHHHHHHHHHHHHhhcCCCCCccCchhhhhhhc--C----cCCCCceeeeecccchHHHHHHHHH
Q 025817 158 ATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAV--A----SGNFQDNWIYWVGPLIGGGLAGLIY 231 (247)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~--~----~~~~~~~wvy~iap~~Ga~~a~~~~ 231 (247)
.+..|+++. ....|+.+|+.+...+++.+++||+++||||||||++ . ..+|+++|+||++|++|+++++++|
T Consensus 163 ~~~~~~~~~--~~~~pl~iGl~v~~~~~~~g~~TG~~iNPAr~lgp~l~~~~~g~~~~w~~~~vy~vap~~Ga~laa~~y 240 (246)
T 2f2b_A 163 GIAVDERAP--KGFAGIIIGLTVAGIITTLGNISGSSLNPARTFGPYLNDMIFAGTDLWNYYSIYVIGPIVGAVLAALTY 240 (246)
T ss_dssp HHTTSTTSC--TTCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCGGGTTHHHHHHHHHHHHHHHHH
T ss_pred EEecCCCCC--CceeeHHHHHHHHHHHhcccccCCCccCHHHHHHHHHHHHHcCCCCCcceEEEeeeHHHHHHHHHHHHH
Confidence 976655532 4578999999999999999999999999999999999 2 2478899999999999999999999
Q ss_pred HHhhc
Q 025817 232 GNVFM 236 (247)
Q Consensus 232 ~~~~~ 236 (247)
++++.
T Consensus 241 ~~l~~ 245 (246)
T 2f2b_A 241 QYLTS 245 (246)
T ss_dssp HHHTC
T ss_pred HHHcC
Confidence 99864
No 13
>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum}
Probab=100.00 E-value=1.2e-50 Score=347.72 Aligned_cols=226 Identities=22% Similarity=0.379 Sum_probs=185.6
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHhhhhcccccCcCCCCCchHHHHHHHHHHHHHHHHHHhcCCCcccchHHHHHHHH
Q 025817 12 FSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLAL 91 (247)
Q Consensus 12 ~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSGah~NPavTl~~~l 91 (247)
..++++|++++||+||++|+|+++++...... .+ ...+++.+++++|+++++.+++++++||||+|||||+++++
T Consensus 5 ~~~~~~~~~~aEflGT~~lv~~G~g~~~~~~~--~~---~~~~~l~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~ 79 (258)
T 3c02_A 5 FYKSYVREFIGEFLGTFVLMFLGEGATANFHT--TG---LSGDWYKLCLGWGLAVFFGILVSAKLSGAHLNLAVSIGLSS 79 (258)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHHHHHHHH--SS---STTCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc--CC---CCccHHHHHHHHHHHHHHHHheecccCcCeeChHHHHHHHH
Confidence 34678999999999999999999988764331 11 13568889999999999999999999999999999999999
Q ss_pred hCCCCcchhHHHHHHHhHHHHHHHHHHHHHhcCC----cCc----ccccCCCCchhHHHHHHHHHHHHHHHHHHhhccCC
Q 025817 92 GGQITILTGIFYWIAQLLGSIVASFLLKVVTGGL----AVP----THNVAAGVGAIEGVVMEIIITFGLVYTVYATAADP 163 (247)
Q Consensus 92 ~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~----~~~----~~~~~~~~~~~~~~~~E~~~T~~l~~~il~~~~~~ 163 (247)
.|+++|++++.|+++|++|+++|+.+++.++++. ..+ ........+..++++.|+++|++|+++++.+. |+
T Consensus 80 ~g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~t~p~~~~~~~E~i~Tf~Lv~~i~~~~-d~ 158 (258)
T 3c02_A 80 INKFDLKKIPVYFFAQLLGAFVGTSTVYGLYHGFISNSKIPQFAWETSRNPSISLTGAFFNELILTGILLLVILVVV-DE 158 (258)
T ss_dssp TTSSCGGGHHHHHHHHHHHHHHHHHHHHHHTHHHHHTTCSCTTCSSCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHH-CH
T ss_pred hCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcchhhhhccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHHHh-Cc
Confidence 9999999999999999999999999999887521 101 01111234456799999999999999999984 44
Q ss_pred CCC-CCCChh-HHHHHHHHHHHHHhhcCCCCCccCchhhhhhhcCcC------CC----CceeeeecccchHHHHHHHHH
Q 025817 164 KKG-SLGTIA-PIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASG------NF----QDNWIYWVGPLIGGGLAGLIY 231 (247)
Q Consensus 164 ~~~-~~~~~~-~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~~~~------~~----~~~wvy~iap~~Ga~~a~~~~ 231 (247)
|+. ..+.+. |+.||+.+....++.+++||+++|||||||||++.+ +| +++|+||++|++|+++++++|
T Consensus 159 ~~~~~~~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~~g~~~~~~~~~y~Wv~~vgP~~Ga~la~~~y 238 (258)
T 3c02_A 159 NICGKFHILKLSSVVGLIILCIGITFGGNTGFALNPSRDLGSRFLSLIAYGKDTFTKDNFYFWVPLVAPCVGSVVFCQFY 238 (258)
T ss_dssp HHHCSCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCTHHHHHHHHTTHHHHHHHHHHHHHHHHHH
T ss_pred ccCCcccccHHHHHHHHHHHHHHHhccCccCCCcChHHHHHHHHHHhccccccccccCCceeehHHHHHHHHHHHHHHHH
Confidence 432 234577 999999999999999999999999999999999862 34 569999999999999999999
Q ss_pred HHhhcCCCCCCC
Q 025817 232 GNVFMHSEHAPL 243 (247)
Q Consensus 232 ~~~~~~~~~~~~ 243 (247)
++++.++.++++
T Consensus 239 ~~~~~~~~~~~~ 250 (258)
T 3c02_A 239 DKVICPLVDLAN 250 (258)
T ss_dssp HHTHHHHHHHC-
T ss_pred HHHhcccCCCcc
Confidence 999877655433
No 14
>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A*
Probab=99.67 E-value=3.2e-16 Score=133.10 Aligned_cols=104 Identities=27% Similarity=0.357 Sum_probs=85.9
Q ss_pred CcCChhhHHHHHHHHHHHHHHHHHHHHHhhhhcccccCcCCCCCchHHHHHHHHHHHHHHHHHHhcCCCcccchHHHHHH
Q 025817 10 DSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGL 89 (247)
Q Consensus 10 ~~~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSGah~NPavTl~~ 89 (247)
+....+.+|.++.|+++||+|++.+++.....+. +. ...++.+|+.+....+..+++||+|+|||||+++
T Consensus 137 p~~~~~~~~~~~~E~i~Tf~Lv~~i~~~~~~~~~--------~~--~~~pl~iGl~v~~~~~~~g~~TG~~iNPAr~lgp 206 (246)
T 2f2b_A 137 PFPGISYWQAMLAEVVGTFLLMITIMGIAVDERA--------PK--GFAGIIIGLTVAGIITTLGNISGSSLNPARTFGP 206 (246)
T ss_dssp CCTTCCHHHHHHHHHHHHHHHHHHHHHHTTSTTS--------CT--TCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
T ss_pred CccccchHHHHHHHHHHHHHHHheeeEEecCCCC--------CC--ceeeHHHHHHHHHHHhcccccCCCccCHHHHHHH
Confidence 3345677899999999999999998875432111 11 1367899999999999999999999999999999
Q ss_pred HH-----hCCCCcchhHHHHHHHhHHHHHHHHHHHHHhc
Q 025817 90 AL-----GGQITILTGIFYWIAQLLGSIVASFLLKVVTG 123 (247)
Q Consensus 90 ~l-----~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~ 123 (247)
.+ .++..|.+.|+||++|++|+++|+++++.+..
T Consensus 207 ~l~~~~~g~~~~w~~~~vy~vap~~Ga~laa~~y~~l~~ 245 (246)
T 2f2b_A 207 YLNDMIFAGTDLWNYYSIYVIGPIVGAVLAALTYQYLTS 245 (246)
T ss_dssp HHHHHHHHCCCCGGGTTHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHcCCCCCcceEEEeeeHHHHHHHHHHHHHHHHcC
Confidence 88 34668899999999999999999999887653
No 15
>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A*
Probab=99.55 E-value=4.4e-15 Score=127.11 Aligned_cols=102 Identities=20% Similarity=0.205 Sum_probs=86.8
Q ss_pred chhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCC--hhHHHHHHHHHHHHHhhcCCCCCccCchhhhhhhcCcC-CCCce
Q 025817 137 GAIEGVVMEIIITFGLVYTVYATAADPKKGSLGT--IAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASG-NFQDN 213 (247)
Q Consensus 137 ~~~~~~~~E~~~T~~l~~~il~~~~~~~~~~~~~--~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~~~~-~~~~~ 213 (247)
+..+.++.|+++|++|+++.+++....++ .... ..++.+|+++.+.+++.+++||+|+|||++++.++.++ +|...
T Consensus 8 ~~~~~~laEfiGT~~Lv~~g~g~~~~~~~-~~~~~l~i~l~~Gl~v~~~i~~~g~iSGahlNPAVTla~~~~g~~~~~~~ 86 (263)
T 2b6o_A 8 SFWRAIFAEFFATLFYVFFGLGASLRWAP-GPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRA 86 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCCCS-SSCHHHHHHHHHHHHHHHHHHHGGGTTCCCCSHHHHHHHHHTTCSCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCC-CCcchHHHHHHHHHHHHHHHHHhhccCcCeeChHHHHHHHHhcCCCHHHH
Confidence 56789999999999999999987543221 2222 35788999999999999999999999999999999865 78999
Q ss_pred eeeecccchHHHHHHHHHHHhhcCCC
Q 025817 214 WIYWVGPLIGGGLAGLIYGNVFMHSE 239 (247)
Q Consensus 214 wvy~iap~~Ga~~a~~~~~~~~~~~~ 239 (247)
|+|+++|++|+++++.+.+.++.++.
T Consensus 87 ~~Yi~AQ~lGa~~ga~l~~~~~~~~~ 112 (263)
T 2b6o_A 87 ICYVVAQLLGAVAGAAVLYSVTPPAV 112 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHccccc
Confidence 99999999999999999999986543
No 16
>3llq_A Aquaporin Z 2; aquaporin tetramer, membrane protein, water channel, structu genomics, PSI-2, protein structure initiative; 2.01A {Agrobacterium tumefaciens str}
Probab=99.47 E-value=4.1e-14 Score=120.31 Aligned_cols=101 Identities=24% Similarity=0.159 Sum_probs=82.6
Q ss_pred CchhHHHHHHHHHHHHHHHHHHhhccC-CC-CCCCCC--hhHHHHHHHHHHHHHhhcCCCCCccCchhhhhhhcCcC-CC
Q 025817 136 VGAIEGVVMEIIITFGLVYTVYATAAD-PK-KGSLGT--IAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASG-NF 210 (247)
Q Consensus 136 ~~~~~~~~~E~~~T~~l~~~il~~~~~-~~-~~~~~~--~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~~~~-~~ 210 (247)
.+..+.++.|+++|++|++..++.... .. +..... ...+.+|+++.+.+++.+++||+++|||++++.++.++ +|
T Consensus 27 ~~l~r~~laEflGT~lLv~~G~G~~~~~~~~~~~~~~~l~iala~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~ 106 (256)
T 3llq_A 27 YVMGRKLLAEFFGTFWLVFGGCGSAVFAAAFPELGIGFTGVALAFGLTVLTMAYAVGGISGGHFNPAVSVGLTVAGRFPA 106 (256)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCccHHHHHHHHHHHHHHHHheeeccccceEchHHHHHHHHhcCCCH
Confidence 356899999999999999988775321 11 111112 34688999999999999999999999999999999866 79
Q ss_pred CceeeeecccchHHHHHHHHHHHhhc
Q 025817 211 QDNWIYWVGPLIGGGLAGLIYGNVFM 236 (247)
Q Consensus 211 ~~~wvy~iap~~Ga~~a~~~~~~~~~ 236 (247)
...+.|+++|++|+++|+.+.+.++.
T Consensus 107 ~~~~~YiiAQ~lGA~~ga~lv~~~~~ 132 (256)
T 3llq_A 107 SSLVPYVIAQVAGAIVAAAALYVIAT 132 (256)
T ss_dssp GGHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 99999999999999999999888874
No 17
>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens}
Probab=99.45 E-value=4.6e-13 Score=114.68 Aligned_cols=103 Identities=21% Similarity=0.352 Sum_probs=84.2
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHhhhhcccccCcCCCCCchHHHHHHHHHHHHHHHHHHhcCCCcccchHHHHHHHH
Q 025817 12 FSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLAL 91 (247)
Q Consensus 12 ~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSGah~NPavTl~~~l 91 (247)
...+..+.++.|+++||+|++..++.... +. . .+.+ ..++.+|+.+.+.....++.||+.+|||+++++.+
T Consensus 125 ~~~s~~~~~~~E~i~Tf~Lv~~il~~~d~-~~-~-----~~~~--~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal 195 (266)
T 3d9s_A 125 NNTTQGQAMVVELILTFQLALCIFASTDS-RR-T-----SPVG--SPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAV 195 (266)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHHHHHHHCT-TC-C-----SCCC--CHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHhcc-cC-C-----Cccc--hHHHHHHHHHHHHHHHhhccccccccHHHHHHHHH
Confidence 34567899999999999999998876421 11 0 0111 35788899999999999999999999999999999
Q ss_pred hCCCCcch-hHHHHHHHhHHHHHHHHHHHHHhcC
Q 025817 92 GGQITILT-GIFYWIAQLLGSIVASFLLKVVTGG 124 (247)
Q Consensus 92 ~g~~~~~~-~~~yi~aQ~~Ga~~g~~~~~~~~~~ 124 (247)
..+ .|.+ .|+||++|++|+++|+++++.+..+
T Consensus 196 ~~~-~~~~~~Wvy~vgP~~Ga~la~~~y~~l~~~ 228 (266)
T 3d9s_A 196 VMN-RFSPAHWVFWVGPIVGAVLAAILYFYLLFP 228 (266)
T ss_dssp HHT-CCCTTHHHHHHHHHHHHHHHHHHHHHTTSC
T ss_pred HcC-CcccCEeeeehHHHHHHHHHHHHHHHHhCC
Confidence 866 7888 9999999999999999999887653
No 18
>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A*
Probab=99.44 E-value=4.1e-13 Score=113.07 Aligned_cols=101 Identities=19% Similarity=0.340 Sum_probs=83.7
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHhhhhcccccCcCCCCCchHHHHHHHHHHHHHHHHHHhcCCCcccchHHHHHHHHh
Q 025817 13 SLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALG 92 (247)
Q Consensus 13 ~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSGah~NPavTl~~~l~ 92 (247)
..+.++.++.|+++||+|++..+.... ++. +.+ ..++.+|+.+.......++.||+.+|||+++++.+.
T Consensus 131 ~~~~~~~~~~E~i~T~~Lv~~i~~~~d--~~~-------~~~--~~pl~IGl~v~~~~~~~g~~TG~s~NPAR~lGPal~ 199 (234)
T 2o9g_A 131 GYSMLSALVVELVLSAGFLLVIHGATD--KFA-------PAG--FAPIAIGLACTLIHLISIPVTNTSVNPARSTAVAIF 199 (234)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHTS--TTS-------CTT--CHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHhcC--CCC-------ccc--hHHHHHHHHHHHHHHHccCCCccccChHHHHHHHHH
Confidence 346789999999999999999886531 111 111 467899999999999999999999999999999988
Q ss_pred C-CCCcchhHHHHHHHhHHHHHHHHHHHHHhcC
Q 025817 93 G-QITILTGIFYWIAQLLGSIVASFLLKVVTGG 124 (247)
Q Consensus 93 g-~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~ 124 (247)
. +..|.+.|+||++|++|+++|+++++.+..+
T Consensus 200 ~g~~~~~~~Wv~~vgP~~Ga~la~~~y~~~~~~ 232 (234)
T 2o9g_A 200 QGGWALEQLWFFWVVPIVGGIIGGLIYRTLLEK 232 (234)
T ss_dssp HCSHHHHSHHHHHHHHHHHHHHHHHHHHHHTSC
T ss_pred hCCCCCceeeeeehHHhHHHHHHHHHHHHHcCC
Confidence 5 3456699999999999999999999887754
No 19
>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens}
Probab=99.44 E-value=5.2e-13 Score=111.61 Aligned_cols=102 Identities=28% Similarity=0.425 Sum_probs=81.2
Q ss_pred cCChhhHHHHHHHHHHHHHHHHHHHHHhhhhcccccCcCCCCCchHHHHHHHHHHHHHHHHHHhcCCCcccchHHHHHHH
Q 025817 11 SFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLA 90 (247)
Q Consensus 11 ~~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSGah~NPavTl~~~ 90 (247)
..+.+..+.++.|+++||+|++......... . . +..+ ..++.+|+.+.+.....++.||+.+|||+++++.
T Consensus 120 ~~~~s~~~~~~~E~i~Tf~Lv~~i~~~~~~~-~-~-----~~~~--~~pl~iGl~v~~~~~~g~~~TG~a~NPAR~~GP~ 190 (223)
T 3gd8_A 120 HGNLTAGHGLLVELIITFQLVFTIFASCDSK-R-T-----DVTG--SIALAIGFSVAIGHLFAINYTGASMNPARSFGPA 190 (223)
T ss_dssp CTTSCHHHHHHHHHHHHHHHHHHHHHHTCTT-C-S-----CCCS--CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
T ss_pred CCccCHHHHHHHHHHHHHHHHHHHHHHhccc-c-C-----CccC--CccHHHHHHHHHHHHhccCCccccccHHHHHHHH
Confidence 3345678999999999999999987653211 1 0 1111 2467888888777777778999999999999999
Q ss_pred HhCCCCcchhHHHHHHHhHHHHHHHHHHHHHh
Q 025817 91 LGGQITILTGIFYWIAQLLGSIVASFLLKVVT 122 (247)
Q Consensus 91 l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~ 122 (247)
+... .|.+.|+||++|++|+++|+++++.++
T Consensus 191 l~~~-~w~~~Wvy~vgP~~Ga~la~~~y~~~~ 221 (223)
T 3gd8_A 191 VIMG-NWENHWIYWVGPIIGAVLAGGLYEYVF 221 (223)
T ss_dssp HHHT-CCTTTTHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHhc-CCCcEEeehhHHHHHHHHHHHHHHHHc
Confidence 9876 799999999999999999999988765
No 20
>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A*
Probab=99.42 E-value=1.1e-12 Score=113.02 Aligned_cols=101 Identities=20% Similarity=0.288 Sum_probs=83.7
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHhhhhcccccCcCCCCCchHHHHHHHHHHHHHHHHHHhcCCCcccchHHHHHHHHh
Q 025817 13 SLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALG 92 (247)
Q Consensus 13 ~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSGah~NPavTl~~~l~ 92 (247)
..+..+.++.|+++||+|++..++....... . .-..++.+|+.+.......++.||+.+|||+++++.+.
T Consensus 165 ~~s~~~~~~~E~i~Tf~Lv~~Il~~~~~~~~--------~--~~~~pl~IGl~v~~~~l~~g~~TG~s~NPAR~~GPal~ 234 (279)
T 2w2e_A 165 GASRTRGLFLEAFGTAILCLTVLMLAVEKHR--------A--TWFAPFVIGIALLIAHLICIYYTGAGLNPARSFGPAVA 234 (279)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHHHTTSCST--------T--GGGHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHccCCCC--------C--cCcHHHHHHHHHHHHHHhcccccccccChHHHHHHHHH
Confidence 4567899999999999999998875422110 0 11467889999999999999999999999999999999
Q ss_pred CCCCcchhHHHHHHHhHHHHHHHHHHHHHhc
Q 025817 93 GQITILTGIFYWIAQLLGSIVASFLLKVVTG 123 (247)
Q Consensus 93 g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~ 123 (247)
.+.-+...|+||++|++|+++|+++++.+..
T Consensus 235 ~~~~~~~~WVy~vgPiiGa~la~~ly~~l~~ 265 (279)
T 2w2e_A 235 ARSFPNYHWIYWLGPILGAFLAYSIWQMWKW 265 (279)
T ss_dssp HTCCCTTTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hccchhhhhHHHHHHHHHHHHHHHHHHHHHc
Confidence 8644567999999999999999999888764
No 21
>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum}
Probab=99.41 E-value=4.3e-14 Score=120.71 Aligned_cols=101 Identities=19% Similarity=0.229 Sum_probs=83.6
Q ss_pred chhHHHHHHHHHHHHHHHHHHhhccC--CCCCCCCC--hhHHHHHHHHHHHHHhhcCCCCCccCchhhhhhhcCcC-CCC
Q 025817 137 GAIEGVVMEIIITFGLVYTVYATAAD--PKKGSLGT--IAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASG-NFQ 211 (247)
Q Consensus 137 ~~~~~~~~E~~~T~~l~~~il~~~~~--~~~~~~~~--~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~~~~-~~~ 211 (247)
+..+.++.|+++|++|++..+++... +.+ .... ...+.+|+++.+.+++.+++||+|+|||++++..+.++ +|.
T Consensus 8 ~~~~~~~aEflGT~~lv~~G~g~~~~~~~~~-~~~~~l~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~ 86 (258)
T 3c02_A 8 SYVREFIGEFLGTFVLMFLGEGATANFHTTG-LSGDWYKLCLGWGLAVFFGILVSAKLSGAHLNLAVSIGLSSINKFDLK 86 (258)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSS-STTCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCC-CCccHHHHHHHHHHHHHHHHheecccCcCeeChHHHHHHHHhCCCcHH
Confidence 56789999999999999987654321 111 1122 35678899999999999999999999999999999876 799
Q ss_pred ceeeeecccchHHHHHHHHHHHhhcCC
Q 025817 212 DNWIYWVGPLIGGGLAGLIYGNVFMHS 238 (247)
Q Consensus 212 ~~wvy~iap~~Ga~~a~~~~~~~~~~~ 238 (247)
+...|+++|++|+++|+.+.+.++.++
T Consensus 87 ~~~~Yi~AQ~lGa~~ga~l~~~~~~~~ 113 (258)
T 3c02_A 87 KIPVYFFAQLLGAFVGTSTVYGLYHGF 113 (258)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHHHTHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcchh
Confidence 999999999999999999999887654
No 22
>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus}
Probab=99.41 E-value=8.4e-13 Score=115.80 Aligned_cols=102 Identities=27% Similarity=0.413 Sum_probs=82.2
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHhhhhcccccCcCCCCCchHHHHHHHHHHHHHHHHHHhcCCCcccchHHHHHHHH
Q 025817 12 FSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLAL 91 (247)
Q Consensus 12 ~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSGah~NPavTl~~~l 91 (247)
...+..+.++.|+++||+|++..++...... . ...+ ..++.+|+.+.+.....++.||+.+|||+++++.+
T Consensus 169 ~~~s~~~~f~~E~i~Tf~Lv~~Ila~~d~~~--~-----~~~~--~~pl~IGl~v~i~~~~g~~~TG~amNPARdlGPal 239 (340)
T 3iyz_A 169 GNLTAGHGLLVELIITFQLVFTIFASCDDKR--T-----DVTG--SVALAIGFSVAIGHLFAINYTGASMNPARSFGPAV 239 (340)
T ss_pred CccCHHHHHHHHHHHHHHHHHHHHHhhcCcc--C-----Cccc--chhhHHHHHHHHHHHhccCCccccccHHHHHHHHH
Confidence 3456789999999999999999876542111 0 0011 24688888888777777899999999999999999
Q ss_pred hCCCCcchhHHHHHHHhHHHHHHHHHHHHHhc
Q 025817 92 GGQITILTGIFYWIAQLLGSIVASFLLKVVTG 123 (247)
Q Consensus 92 ~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~ 123 (247)
... .|...|+||++|++|+++|++++++++.
T Consensus 240 ~~~-~w~~~WVywvgPiiGailaallY~~l~~ 270 (340)
T 3iyz_A 240 IMG-NWENHWIYWVGPIIGAVLAGALYEYVFC 270 (340)
T ss_pred Hcc-CCCcEeehhHHHHHHHHHHHHHHHHHhC
Confidence 865 7999999999999999999999988774
No 23
>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A
Probab=99.40 E-value=7.8e-13 Score=114.81 Aligned_cols=102 Identities=28% Similarity=0.428 Sum_probs=82.7
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHhhhhcccccCcCCCCCchHHHHHHHHHHHHHHHHHHhcCCCcccchHHHHHHHH
Q 025817 12 FSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLAL 91 (247)
Q Consensus 12 ~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSGah~NPavTl~~~l 91 (247)
...+..+.++.|+++||+|++..++.... +.. ...+ ..++.+|+.+.+.....++.||+.+|||+++++.+
T Consensus 130 ~~~s~~~~f~~E~i~Tf~Lv~~Il~~~d~--~~~-----~~~~--~~pl~IGl~v~i~~~~g~~~TG~a~NPAR~~GPal 200 (301)
T 2zz9_A 130 GNLTAGHGLLVELIITFQLVFTIFASCDD--KRT-----DVTG--SVALAIGFSVAIGHLFAINYTGASMNPARSFGPAV 200 (301)
T ss_dssp SSCCHHHHHHHHHHHHHHHHHHHHHHSCS--SSS-----CCSS--CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHhcCC--CCC-----Cccc--hHhHHHHHHHHHHHHHhcCCcccccCcHHHHHHHH
Confidence 34567899999999999999998865311 110 1111 35688899988888888899999999999999999
Q ss_pred hCCCCcchhHHHHHHHhHHHHHHHHHHHHHhc
Q 025817 92 GGQITILTGIFYWIAQLLGSIVASFLLKVVTG 123 (247)
Q Consensus 92 ~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~ 123 (247)
... .|...|+||++|++|+++|+++++.+..
T Consensus 201 ~~~-~w~~~WVy~vgPiiGailaa~ly~~l~~ 231 (301)
T 2zz9_A 201 IMG-NWENHWIYWVGPIIGAVLAGALYEYVFC 231 (301)
T ss_dssp HHC-CCTTTTHHHHHHHHHHHHHHHHHHTTTC
T ss_pred HhC-CCcceeeeeeHHHHHHHHHHHHHHHHhC
Confidence 975 7999999999999999999999887764
No 24
>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A
Probab=99.38 E-value=1.1e-12 Score=112.59 Aligned_cols=101 Identities=19% Similarity=0.379 Sum_probs=80.7
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhhhcccccCcCCCCCchHHHHHHHHHHHHHHHHHHhcCCCcccchHHHHHHHHhC
Q 025817 14 LGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGG 93 (247)
Q Consensus 14 ~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSGah~NPavTl~~~l~g 93 (247)
.+..+.++.|+++||+|++..++.... +. . ...+ ..++.+|+.+.+.....++.||+.+|||+++++.+..
T Consensus 135 ~~~~~~~~~E~i~T~~Lv~~i~~~~d~-~~-~-----~~~~--~~pl~IGl~v~~~~~~~~~~TG~a~NPAR~~Gpal~~ 205 (271)
T 1j4n_A 135 VNSGQGLGIEIIGTLQLVLCVLATTDR-RR-R-----DLGG--SGPLAIGFSVALGHLLAIDYTGCGINPARSFGSSVIT 205 (271)
T ss_dssp CCTTGGGHHHHHHHHHHHHHHHHHTCS-SC-C-----CCCS--CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHT
T ss_pred cchHHHHHHHHHHHHHHHHHHHhhccc-cC-C-----Cccc--cHHHHHHHHHHHHHHhccCCCccccChHHHHHHHHHh
Confidence 345778999999999999988764311 11 0 0111 3578889999877777789999999999999999887
Q ss_pred CCCcchhHHHHHHHhHHHHHHHHHHHHHhcC
Q 025817 94 QITILTGIFYWIAQLLGSIVASFLLKVVTGG 124 (247)
Q Consensus 94 ~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~ 124 (247)
+ .|...|+||++|++|+++|+++++.+..+
T Consensus 206 ~-~~~~~wv~~vgP~~Ga~la~~~y~~~~~~ 235 (271)
T 1j4n_A 206 H-NFQDHWIFWVGPFIGAALAVLIYDFILAP 235 (271)
T ss_dssp T-CCTTTTHHHHHHHHHHHHHHHHHHTTTSC
T ss_pred C-CCcceeHHHHHHHHHHHHHHHHHHHHhCC
Confidence 6 78999999999999999999998887653
No 25
>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A
Probab=99.37 E-value=2.3e-13 Score=118.38 Aligned_cols=102 Identities=19% Similarity=0.205 Sum_probs=83.5
Q ss_pred chhHHHHHHHHHHHHHHHHHHhhccC---CCC-CCCCC--hhHHHHHHHHHHHHHhhcCCCCCccCchhhhhhhcCcC-C
Q 025817 137 GAIEGVVMEIIITFGLVYTVYATAAD---PKK-GSLGT--IAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASG-N 209 (247)
Q Consensus 137 ~~~~~~~~E~~~T~~l~~~il~~~~~---~~~-~~~~~--~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~~~~~-~ 209 (247)
+..+.++.||++|++|+++.+++... +++ ..... ...+.+|+++++.+++.+.+||+|+|||++++..+.+. .
T Consensus 59 ~~~r~~lAEfiGT~lLv~~g~gsv~~~~~~~~~~~~~g~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~l~g~~~ 138 (304)
T 3cn5_A 59 SFWRAAIAEFIATLLFLYITVATVIGHSKETVVCGSVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVE 138 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSTTCSCHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHHHHTTSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHeEeccccCCCCCCCceeehhhhhhhhheeeeEeeccCCCccCcHHHHHHHHhCCCC
Confidence 46789999999999999988765321 111 11112 35678899999999999999999999999999999876 7
Q ss_pred CCceeeeecccchHHHHHHHHHHHhhcCC
Q 025817 210 FQDNWIYWVGPLIGGGLAGLIYGNVFMHS 238 (247)
Q Consensus 210 ~~~~wvy~iap~~Ga~~a~~~~~~~~~~~ 238 (247)
|.....|+++|++|+++|+.+.+.++.++
T Consensus 139 ~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~~ 167 (304)
T 3cn5_A 139 LLRALVYMIAQCLGAICGVGLVKAFMKGP 167 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 88999999999999999999999887653
No 26
>1ldf_A Glycerol uptake facilitator protein; glycerol-conducting membrane channel protein, transport PROT; HET: BOG; 2.10A {Escherichia coli} SCOP: f.19.1.1 PDB: 1fx8_A* 1lda_A* 1ldi_A*
Probab=99.33 E-value=4.4e-12 Score=109.52 Aligned_cols=103 Identities=18% Similarity=0.222 Sum_probs=81.8
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHhhhhcccccCcCCCCCchHHHHHHHHHHHHHHHHHHhcCCCcccchHHHHHHHHh
Q 025817 13 SLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALG 92 (247)
Q Consensus 13 ~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~v~~~i~~~~~iSGah~NPavTl~~~l~ 92 (247)
+.+.++.++.|+++||+|++..++....... .+ ..-..++.+|+.+.......++.||+.+|||+++++.+.
T Consensus 142 ~~s~~~~~~~E~i~Tf~Lv~~il~~~d~~~~-------~~-~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~ 213 (281)
T 1ldf_A 142 HINFVQAFAVEMVITAILMGLILALTDDGNG-------VP-RGPLAPLLIGLLIAVIGASMGPLTGTAMNPARDFGPKVF 213 (281)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHHHHCTTSS-------SC-CGGGHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHhccCCC-------Cc-ccchHHHHHHHHHHHHHHhcccccccccCcHhhHHHHHH
Confidence 3467899999999999999998875421110 00 011467899999999999999999999999999998886
Q ss_pred C------CCCcc------hhHHHHHHHhHHHHHHHHHHHHHhc
Q 025817 93 G------QITIL------TGIFYWIAQLLGSIVASFLLKVVTG 123 (247)
Q Consensus 93 g------~~~~~------~~~~yi~aQ~~Ga~~g~~~~~~~~~ 123 (247)
. +..|. ..|+||++|++|+++|+++++.+..
T Consensus 214 ~~~~g~g~~~~~~~~~~~~~WVy~vgPi~Ga~la~~~y~~l~~ 256 (281)
T 1ldf_A 214 AWLAGWGNVAFTGGRDIPYFLVPLFGPIVGAIVGAFAYRKLIG 256 (281)
T ss_dssp HHHTTTTTHHHHTTCSSCTTHHHHHHHHHHHHHHHHHHHHHTG
T ss_pred HHhcccccccccccCCCceeeHHhHHHHHHHHHHHHHHHHHhC
Confidence 3 22232 6999999999999999999988764
No 27
>3kcu_A Probable formate transporter 1; TCDB ID 2.A.44.1.1, channel, cell inner membrane, cell membrane, membrane, transmembrane; HET: MA5; 2.24A {Escherichia coli O157} PDB: 3kcv_A 3q7k_A
Probab=88.47 E-value=6.7 Score=33.20 Aligned_cols=102 Identities=19% Similarity=0.304 Sum_probs=61.3
Q ss_pred hHHHHHHHHHHHHHHHHHHhcCCCcccchHHHHHHHHhCCCCcchhHHHHHHHhHHHHHHHHHHHHHh--cCCc---Ccc
Q 025817 55 LVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVT--GGLA---VPT 129 (247)
Q Consensus 55 ~~~~~l~~g~~v~~~i~~~~~iSGah~NPavTl~~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~--~~~~---~~~ 129 (247)
.+..++.+.+++...+...+..-=+ |--.++ ..+.||.+|++.+--|.-=.+|-++|++++-++. .+.. .+.
T Consensus 68 ~ll~g~~F~vGL~lVvl~G~ELFTg--n~l~~~-a~~~~~is~~~~lr~W~~v~~gNliGal~~a~l~~~s~~~~~~~~~ 144 (285)
T 3kcu_A 68 KLVGGICFSLGLILCVVCGADLFTS--TVLIVV-AKASGRITWGQLAKNWLNVYFGNLVGALLFVLLMWLSGEYMTANGQ 144 (285)
T ss_dssp HHHHHHHHTHHHHHHHHHTCCCTTT--THHHHH-HHTTTCCCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHTGGGTTTTH
T ss_pred HHHHHHHHHHHHHHHHHhCcccccc--chHHHH-HHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccCchH
Confidence 3456677777777777666554323 322333 3457888998877777777777777766654432 1110 000
Q ss_pred c--------ccCCCCchhHHHHHHHHHHHHHHHHHHhh
Q 025817 130 H--------NVAAGVGAIEGVVMEIIITFGLVYTVYAT 159 (247)
Q Consensus 130 ~--------~~~~~~~~~~~~~~E~~~T~~l~~~il~~ 159 (247)
. .-..+.+..+.|+-=++|-++.++.+...
T Consensus 145 ~~~~~~~ia~~K~~~~~~~~f~~GIlcN~lVclaVw~~ 182 (285)
T 3kcu_A 145 WGLNVLQTADHKVHHTFIEAVCLGILANLMVCLAVWMS 182 (285)
T ss_dssp HHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 01123467788888888888888887765
No 28
>3tds_E Formate/nitrite transporter; membrane protein; HET: PG4 BOG; 1.98A {Clostridium difficile} PDB: 3tdo_A* 3tdr_A* 3te0_A* 3tdx_A* 3te2_A* 3te1_A* 3tdp_A*
Probab=71.95 E-value=42 Score=27.95 Aligned_cols=105 Identities=16% Similarity=0.236 Sum_probs=62.7
Q ss_pred CchHHHHHHHHHHHHHHHHHHhcCCCcccchHHHHHHHHhCCCCcchhHHHHHHHhHHHHHHHHHHHHHhc--CCc-Ccc
Q 025817 53 SGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTG--GLA-VPT 129 (247)
Q Consensus 53 ~~~~~~~l~~g~~v~~~i~~~~~iSGah~NPavTl~~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~--~~~-~~~ 129 (247)
...+..++.+.+++...+..-+..-=+ |-.......+.||.+|++.+--|.-=.+|-++|+++.-++.. +.. .+.
T Consensus 62 ~~~ll~g~~F~~Gl~lVvl~g~eLfTg--n~l~~~~~~~~~~~s~~~~lr~W~~v~~gNliGa~~~a~l~~~sg~~~~~~ 139 (268)
T 3tds_E 62 MTKIVMGLSFAIALSLVIMTGTELFTG--NNMVMSAGMLNKGVSIKDTSKIWAYSWVGNLIGALVLGIIFVGTGLVDKGP 139 (268)
T ss_dssp THHHHHHHTCTHHHHHHHHHTCCCHHH--HHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSSSH
T ss_pred HHHHHHHHHHHHHHHHHHHhCcccccc--chHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCCCcH
Confidence 344556677777776666544332211 333222355778999999988888888888888776554432 111 110
Q ss_pred c-----cc---CCCCchhHHHHHHHHHHHHHHHHHHhh
Q 025817 130 H-----NV---AAGVGAIEGVVMEIIITFGLVYTVYAT 159 (247)
Q Consensus 130 ~-----~~---~~~~~~~~~~~~E~~~T~~l~~~il~~ 159 (247)
. .. ..+.+..+.|+-=++|-++.++.+...
T Consensus 140 ~~~~~~~ia~~K~~~~~~~~f~~gIlcN~lVclaVw~~ 177 (268)
T 3tds_E 140 VAEFFANTAASKASMPFTALFFRGILCNILVCVSVLCS 177 (268)
T ss_dssp HHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 00 013466778888888888888877754
No 29
>3kly_A Putative formate transporter 1; membrane protein, channel, structural genomics, PSI-2, protein structure initiative; HET: BOG; 2.10A {Vibrio cholerae} PDB: 3klz_A*
Probab=47.59 E-value=1.1e+02 Score=25.41 Aligned_cols=101 Identities=11% Similarity=0.204 Sum_probs=63.2
Q ss_pred hHHHHHHHHHHHHHHHHHHhcC-CCcccchHHHHHHHHhCCCCcchhHHHHHHHhHHHHHHHHHHHHHh--cCC---cCc
Q 025817 55 LVAIAICHGFALFVAVAIGANI-SGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVT--GGL---AVP 128 (247)
Q Consensus 55 ~~~~~l~~g~~v~~~i~~~~~i-SGah~NPavTl~~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~--~~~---~~~ 128 (247)
.+..++.+.+++...+...+.. +|--+ .++ ..+.+|.+|++.+--|.-=.+|-++|++++-++. .+. +.+
T Consensus 67 ~ll~g~~F~vGL~lVvl~g~ELFTgn~l---~~~-~~~~~~is~~~~lr~W~~v~~gNliGal~~a~l~~~s~~~~~~~~ 142 (280)
T 3kly_A 67 KLLGGLAFSLGLILVVITGGELFTSSVL---ILV-AKASGKISWKELVRNWTVVYFGNLCGSIILVFIMLATRQFMEDGG 142 (280)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCCTTTTCC---CCS-SSSSSSCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGTTTT
T ss_pred HHHHHHHHHHHHHHHHHccccccccchH---HHH-HHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccCCch
Confidence 3456777777777777666653 34333 222 2456788999988888888888888877655442 111 000
Q ss_pred cc--------ccCCCCchhHHHHHHHHHHHHHHHHHHhh
Q 025817 129 TH--------NVAAGVGAIEGVVMEIIITFGLVYTVYAT 159 (247)
Q Consensus 129 ~~--------~~~~~~~~~~~~~~E~~~T~~l~~~il~~ 159 (247)
.. .-..+.+..+.|+-=++|-++.++.+...
T Consensus 143 ~~~~~~~~ia~~K~~~~~~~~f~~GIlcN~lVclaVw~~ 181 (280)
T 3kly_A 143 QLGLNAMAISQHKLHHTFLQAFALGLMCNILVCLAVWMT 181 (280)
T ss_dssp HHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 01123467788888888888888887765
No 30
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=45.20 E-value=4.4 Score=35.04 Aligned_cols=18 Identities=33% Similarity=0.628 Sum_probs=15.7
Q ss_pred CCcccchHHHHHHHHhCC
Q 025817 77 SGGHVNPAVTFGLALGGQ 94 (247)
Q Consensus 77 SGah~NPavTl~~~l~g~ 94 (247)
||||++||++++-.+..+
T Consensus 12 TgGHi~palala~~L~~~ 29 (365)
T 3s2u_A 12 TGGHVFPALACAREFQAR 29 (365)
T ss_dssp SHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHhC
Confidence 689999999999988754
No 31
>4fc4_A Nitrite transporter NIRC; alpha-helical inner membrane protein, ION channel, cytoplasm membrane, transport protein; HET: BOG; 2.40A {Salmonella enterica subsp}
Probab=28.43 E-value=2.5e+02 Score=23.08 Aligned_cols=100 Identities=15% Similarity=0.178 Sum_probs=58.0
Q ss_pred hHHHHHHHHHHHHHHHHHHhcCCCccc---chHHHHHHHHhCCCCcchhHHHHHHHhHHHHHHHHHHHHHhc--CCc-Cc
Q 025817 55 LVAIAICHGFALFVAVAIGANISGGHV---NPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTG--GLA-VP 128 (247)
Q Consensus 55 ~~~~~l~~g~~v~~~i~~~~~iSGah~---NPavTl~~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~--~~~-~~ 128 (247)
.+..++.+.+++...+.. |+.+ |-.......+.||.+|++.+--|.-=.+|-++|++++-++.. +.. .+
T Consensus 58 ~ll~g~~F~vGl~lVvl~-----g~eLfTgn~l~~~~~~~~~~~s~~~~lr~W~~v~~gNliGa~~~a~l~~~~g~~~~~ 132 (261)
T 4fc4_A 58 PLVMGATFGIALTLVIIA-----GSELFTGHTMFLTLGVKAGTISHGQMWAILPQTWLGNLVGSVFVALLYSWGGGSLLP 132 (261)
T ss_dssp HHHHHHHTTHHHHHHHHT-----CCCCHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTSS
T ss_pred HHHHHHHHHHHHHHHHHc-----CCcccccchHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccCc
Confidence 345566666666655543 4444 433222345568899999888887777777777766544332 110 11
Q ss_pred cc-----ccC---CCCchhHHHHHHHHHHHHHHHHHHhh
Q 025817 129 TH-----NVA---AGVGAIEGVVMEIIITFGLVYTVYAT 159 (247)
Q Consensus 129 ~~-----~~~---~~~~~~~~~~~E~~~T~~l~~~il~~ 159 (247)
.. ... ...+..+.|+-=++|-++.++.+...
T Consensus 133 ~~~~~~~~ia~~K~~~~~~~~f~~gIlcN~lVclaVw~~ 171 (261)
T 4fc4_A 133 VDTSIVHSVALAKTTAPATVLFFKGALCNWLVCLAIWMA 171 (261)
T ss_dssp CTTSHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 000 02345677777778888877777664
Done!