BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025823
(247 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P49351|FPPS1_LUPAL Farnesyl pyrophosphate synthase 1 OS=Lupinus albus GN=FPS1 PE=2
SV=1
Length = 342
Score = 435 bits (1119), Expect = e-121, Method: Compositional matrix adjust.
Identities = 204/247 (82%), Positives = 223/247 (90%)
Query: 1 MDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEF 60
MD SHTRRGQPCWFRVPKVGMIAANDGVLLRNHI RILK HFR KPYY DLLDLFNEVEF
Sbjct: 96 MDNSHTRRGQPCWFRVPKVGMIAANDGVLLRNHIPRILKKHFRGKPYYADLLDLFNEVEF 155
Query: 61 QTASGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYYSFYLPVACALLMAGENLDKHV 120
QTASGQMIDLITT+EGEKDLSKY+L LHRRIVQYKTAYYSFYLPVACALLM GENLD H+
Sbjct: 156 QTASGQMIDLITTLEGEKDLSKYTLSLHRRIVQYKTAYYSFYLPVACALLMVGENLDNHI 215
Query: 121 EVKDILVQMGIYFQVQDDFLDCFGSPEVIGKVGTDIEDYKCSWLVVKALELCNEEQKKLV 180
+VK+ILV MG YFQVQDD+LDCFG+PE IGK+GTDIED+KCSWLVVKALEL N+EQKK++
Sbjct: 216 DVKNILVDMGTYFQVQDDYLDCFGAPETIGKIGTDIEDFKCSWLVVKALELSNDEQKKVL 275
Query: 181 HENYGKVDPACVAKVKELYKTLDLEGAFVEYEKESYEKLTKSIEAHPTKEVQAVLKSFLA 240
++NYGK DPA VAKVK LY L+L+G F EYE +SYEKL SIEAHP+K VQA+LKSFL
Sbjct: 276 YDNYGKPDPANVAKVKALYDELNLQGVFTEYESKSYEKLVTSIEAHPSKAVQALLKSFLG 335
Query: 241 KIYKRQK 247
KIYKRQK
Sbjct: 336 KIYKRQK 342
>sp|Q7XYS9|FPPS1_ARTSI Farnesyl diphosphate synthase 1 OS=Artemisia spiciformis GN=FDS-1
PE=1 SV=1
Length = 346
Score = 433 bits (1114), Expect = e-121, Method: Compositional matrix adjust.
Identities = 203/247 (82%), Positives = 224/247 (90%)
Query: 1 MDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEF 60
MD SHTRRGQPCWFR+PKVGMIAANDG+LLRNH+ RILK HFR KPYYVDL+DLFNEVEF
Sbjct: 100 MDESHTRRGQPCWFRLPKVGMIAANDGILLRNHVPRILKKHFRGKPYYVDLVDLFNEVEF 159
Query: 61 QTASGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYYSFYLPVACALLMAGENLDKHV 120
QTASGQMIDLITT+ GEKDLSKYSL +HRRIVQYKTAYYSFYLPVACALLM GE+LDKHV
Sbjct: 160 QTASGQMIDLITTLVGEKDLSKYSLSIHRRIVQYKTAYYSFYLPVACALLMFGEDLDKHV 219
Query: 121 EVKDILVQMGIYFQVQDDFLDCFGSPEVIGKVGTDIEDYKCSWLVVKALELCNEEQKKLV 180
EVK++LV+MG YFQVQDD+LDCFG+PEVIGK+GTDIED+KCSWLVVKALEL NEEQKK +
Sbjct: 220 EVKNVLVEMGTYFQVQDDYLDCFGAPEVIGKIGTDIEDFKCSWLVVKALELANEEQKKTL 279
Query: 181 HENYGKVDPACVAKVKELYKTLDLEGAFVEYEKESYEKLTKSIEAHPTKEVQAVLKSFLA 240
HENYGK DPA VAKVKE+Y TL+L+ F +YE SY+KL SIE HP+K VQAVLKSFL
Sbjct: 280 HENYGKKDPASVAKVKEVYHTLNLQAVFEDYEATSYKKLITSIENHPSKAVQAVLKSFLG 339
Query: 241 KIYKRQK 247
KIYKRQK
Sbjct: 340 KIYKRQK 346
>sp|O24242|FPPS2_PARAR Farnesyl pyrophosphate synthase 2 OS=Parthenium argentatum GN=FPS2
PE=2 SV=1
Length = 342
Score = 432 bits (1111), Expect = e-120, Method: Compositional matrix adjust.
Identities = 201/247 (81%), Positives = 226/247 (91%)
Query: 1 MDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEF 60
MD SHTRRGQPCWFR+PKVGMIAANDG++LRNH+ RILK HFR KPYYVDL+DLFNEVEF
Sbjct: 96 MDESHTRRGQPCWFRLPKVGMIAANDGIILRNHVPRILKKHFRGKPYYVDLVDLFNEVEF 155
Query: 61 QTASGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYYSFYLPVACALLMAGENLDKHV 120
QTASGQMIDLITT+ GEKDLSKYSL +HRRIVQYKTAYYSFYLPVACALLM GE+L+KHV
Sbjct: 156 QTASGQMIDLITTLVGEKDLSKYSLSIHRRIVQYKTAYYSFYLPVACALLMFGEDLEKHV 215
Query: 121 EVKDILVQMGIYFQVQDDFLDCFGSPEVIGKVGTDIEDYKCSWLVVKALELCNEEQKKLV 180
EVK++LV+MG YFQVQDD+LDCFG+PEVIGK+GTDIED+KCSWLVVKALEL NEEQKK++
Sbjct: 216 EVKNVLVEMGTYFQVQDDYLDCFGAPEVIGKIGTDIEDFKCSWLVVKALELANEEQKKVL 275
Query: 181 HENYGKVDPACVAKVKELYKTLDLEGAFVEYEKESYEKLTKSIEAHPTKEVQAVLKSFLA 240
HENYGK DP+ VAKVKELY TL+L+G F +YE SY+KL SIE HP+K VQAVLKSFL
Sbjct: 276 HENYGKKDPSPVAKVKELYNTLNLQGVFEDYENTSYKKLITSIEGHPSKAVQAVLKSFLG 335
Query: 241 KIYKRQK 247
KIY+RQK
Sbjct: 336 KIYRRQK 342
>sp|P49350|FPPS_ARTAN Farnesyl pyrophosphate synthase OS=Artemisia annua GN=FPS1 PE=2
SV=1
Length = 343
Score = 431 bits (1108), Expect = e-120, Method: Compositional matrix adjust.
Identities = 203/247 (82%), Positives = 224/247 (90%)
Query: 1 MDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEF 60
MD SHTRRGQPCWFR+PKVGMIAANDG+LLRNH+ RILK HFR KPYYVDL+DLFNEVEF
Sbjct: 97 MDESHTRRGQPCWFRLPKVGMIAANDGILLRNHVPRILKKHFRGKPYYVDLVDLFNEVEF 156
Query: 61 QTASGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYYSFYLPVACALLMAGENLDKHV 120
QTASGQMIDLITT+ GEKDLSKYSL +HRRIVQYKTAYYSFYLPVACALLM GE+LDKHV
Sbjct: 157 QTASGQMIDLITTLVGEKDLSKYSLSIHRRIVQYKTAYYSFYLPVACALLMFGEDLDKHV 216
Query: 121 EVKDILVQMGIYFQVQDDFLDCFGSPEVIGKVGTDIEDYKCSWLVVKALELCNEEQKKLV 180
EVK++LV+MG YFQVQDD+LDCFG+PEVIGK+GTDIED+KCSWLVVKALEL NEEQKK +
Sbjct: 217 EVKNVLVEMGTYFQVQDDYLDCFGAPEVIGKIGTDIEDFKCSWLVVKALELPNEEQKKTL 276
Query: 181 HENYGKVDPACVAKVKELYKTLDLEGAFVEYEKESYEKLTKSIEAHPTKEVQAVLKSFLA 240
HENYGK DPA VAKVKE+Y TL+L+ F +YE SY+KL SIE HP+K VQAVLKSFL
Sbjct: 277 HENYGKKDPASVAKVKEVYHTLNLQAVFEDYEATSYKKLITSIENHPSKAVQAVLKSFLG 336
Query: 241 KIYKRQK 247
KIYKRQK
Sbjct: 337 KIYKRQK 343
>sp|P49352|FPPS2_LUPAL Farnesyl pyrophosphate synthase 2 OS=Lupinus albus GN=FPS2 PE=2
SV=1
Length = 342
Score = 430 bits (1106), Expect = e-120, Method: Compositional matrix adjust.
Identities = 202/247 (81%), Positives = 220/247 (89%)
Query: 1 MDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEF 60
MD SHTRRG PCWFRVPKVGMIA NDGV+LRNHI RILK HFR KPYYVDLLDLFNEVEF
Sbjct: 96 MDNSHTRRGHPCWFRVPKVGMIAPNDGVVLRNHIPRILKKHFRGKPYYVDLLDLFNEVEF 155
Query: 61 QTASGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYYSFYLPVACALLMAGENLDKHV 120
QTASGQMIDLITT+EGEKDLSKY+L LHRRIVQYKTAYYSFYLPVACALLM GENLD H
Sbjct: 156 QTASGQMIDLITTLEGEKDLSKYTLSLHRRIVQYKTAYYSFYLPVACALLMVGENLDNHT 215
Query: 121 EVKDILVQMGIYFQVQDDFLDCFGSPEVIGKVGTDIEDYKCSWLVVKALELCNEEQKKLV 180
+VK+ILV+MG YFQVQDD+LDCFG+PE IGK+GTDIED+KCSWLVVKALEL NEEQKK++
Sbjct: 216 DVKNILVEMGTYFQVQDDYLDCFGAPETIGKIGTDIEDFKCSWLVVKALELSNEEQKKVL 275
Query: 181 HENYGKVDPACVAKVKELYKTLDLEGAFVEYEKESYEKLTKSIEAHPTKEVQAVLKSFLA 240
+ENYGK DPA VAKVK LY L+LEGA+ +YE +SYEKL IE HP+K VQ VLKSF A
Sbjct: 276 YENYGKPDPANVAKVKTLYNELNLEGAYADYESKSYEKLVTCIEGHPSKAVQGVLKSFWA 335
Query: 241 KIYKRQK 247
KIYKRQK
Sbjct: 336 KIYKRQK 342
>sp|O24241|FPPS1_PARAR Farnesyl pyrophosphate synthase 1 OS=Parthenium argentatum GN=FPS1
PE=2 SV=1
Length = 342
Score = 430 bits (1106), Expect = e-120, Method: Compositional matrix adjust.
Identities = 201/247 (81%), Positives = 225/247 (91%)
Query: 1 MDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEF 60
MD SHTRRGQPCWFR+PKVGMIAANDG++LRN++ RILK HFR KPYYVDLLDLFNEVEF
Sbjct: 96 MDESHTRRGQPCWFRLPKVGMIAANDGIILRNNVPRILKKHFRGKPYYVDLLDLFNEVEF 155
Query: 61 QTASGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYYSFYLPVACALLMAGENLDKHV 120
QTASGQMIDLITT+ GEKDLSKYSL +HRRIVQYKTAYYSFYLPVACALLM GE+L+KH
Sbjct: 156 QTASGQMIDLITTLVGEKDLSKYSLSIHRRIVQYKTAYYSFYLPVACALLMFGEDLEKHE 215
Query: 121 EVKDILVQMGIYFQVQDDFLDCFGSPEVIGKVGTDIEDYKCSWLVVKALELCNEEQKKLV 180
EVK++LV+MG YFQVQDD+LDCFG+PEVIGK+GTDIED+KCSWLVVKALEL NEEQKK++
Sbjct: 216 EVKNVLVEMGTYFQVQDDYLDCFGAPEVIGKIGTDIEDFKCSWLVVKALELSNEEQKKIL 275
Query: 181 HENYGKVDPACVAKVKELYKTLDLEGAFVEYEKESYEKLTKSIEAHPTKEVQAVLKSFLA 240
HENYGK DP+ VAKVKELY TL+L+G F +YE SY+KL SIE HP+K VQAVLKSFL
Sbjct: 276 HENYGKKDPSSVAKVKELYHTLNLQGVFEDYENTSYKKLITSIEGHPSKAVQAVLKSFLG 335
Query: 241 KIYKRQK 247
KIYKRQK
Sbjct: 336 KIYKRQK 342
>sp|O64905|FPPS_HELAN Farnesyl pyrophosphate synthase OS=Helianthus annuus GN=FPS1 PE=2
SV=1
Length = 341
Score = 428 bits (1100), Expect = e-119, Method: Compositional matrix adjust.
Identities = 201/247 (81%), Positives = 224/247 (90%), Gaps = 1/247 (0%)
Query: 1 MDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEF 60
MDGSHTRRGQPCWFR+PKVGMIAANDG++LRNH+ RILK HFR KPYYVDL+DLFNEVEF
Sbjct: 96 MDGSHTRRGQPCWFRLPKVGMIAANDGLILRNHVPRILKKHFRGKPYYVDLVDLFNEVEF 155
Query: 61 QTASGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYYSFYLPVACALLMAGENLDKHV 120
QTASGQMIDLITT+ GEKDLSKYSL +HRRIVQYKTAYYSFYLPVACALLM GE+LD HV
Sbjct: 156 QTASGQMIDLITTLVGEKDLSKYSLSIHRRIVQYKTAYYSFYLPVACALLMFGEDLDNHV 215
Query: 121 EVKDILVQMGIYFQVQDDFLDCFGSPEVIGKVGTDIEDYKCSWLVVKALELCNEEQKKLV 180
EVK++LV+MG YFQVQDD+LDCFG+PEVIGK+GTDIED+ SWLVVKALEL NEEQKK++
Sbjct: 216 EVKNVLVEMGTYFQVQDDYLDCFGAPEVIGKIGTDIEDF-SSWLVVKALELANEEQKKVL 274
Query: 181 HENYGKVDPACVAKVKELYKTLDLEGAFVEYEKESYEKLTKSIEAHPTKEVQAVLKSFLA 240
HENYGK DP+ VAKVKELY TL+L+G F +YE SY+KL SIE HP+K VQAVLKSFL
Sbjct: 275 HENYGKKDPSSVAKVKELYNTLNLQGVFEDYESTSYKKLITSIEGHPSKAVQAVLKSFLG 334
Query: 241 KIYKRQK 247
KIYKRQK
Sbjct: 335 KIYKRQK 341
>sp|Q43315|FPPS2_ARATH Farnesyl pyrophosphate synthase 2 OS=Arabidopsis thaliana GN=FPS2
PE=2 SV=1
Length = 342
Score = 424 bits (1089), Expect = e-118, Method: Compositional matrix adjust.
Identities = 199/247 (80%), Positives = 221/247 (89%)
Query: 1 MDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEF 60
MD S TRRGQPCWFR PKVGMIA NDG+LLRNHI RILK HFR+ PYYVDL+DLFNEVEF
Sbjct: 96 MDNSVTRRGQPCWFRKPKVGMIAINDGILLRNHIHRILKKHFREMPYYVDLVDLFNEVEF 155
Query: 61 QTASGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYYSFYLPVACALLMAGENLDKHV 120
QTA GQMIDLITT +GEKDLSKYSL +HRRIV+YKTAYYSFYLPVACALLMAGENL+ H
Sbjct: 156 QTACGQMIDLITTFDGEKDLSKYSLQIHRRIVEYKTAYYSFYLPVACALLMAGENLENHT 215
Query: 121 EVKDILVQMGIYFQVQDDFLDCFGSPEVIGKVGTDIEDYKCSWLVVKALELCNEEQKKLV 180
+VK +LV MGIYFQVQDD+LDCF PE +GK+GTDIED+KCSWLVVKALE C+EEQ K++
Sbjct: 216 DVKTVLVDMGIYFQVQDDYLDCFADPETLGKIGTDIEDFKCSWLVVKALERCSEEQTKIL 275
Query: 181 HENYGKVDPACVAKVKELYKTLDLEGAFVEYEKESYEKLTKSIEAHPTKEVQAVLKSFLA 240
+ENYGK +P+ VAKVK LYK LDLEGAF+EYEKESYEKLTK IEAH +K +QAVLKSFLA
Sbjct: 276 YENYGKAEPSNVAKVKALYKELDLEGAFMEYEKESYEKLTKLIEAHQSKAIQAVLKSFLA 335
Query: 241 KIYKRQK 247
KIYKRQK
Sbjct: 336 KIYKRQK 342
>sp|Q09152|FPPS1_ARATH Farnesyl pyrophosphate synthase 1, mitochondrial OS=Arabidopsis
thaliana GN=FPS1 PE=2 SV=2
Length = 384
Score = 424 bits (1089), Expect = e-118, Method: Compositional matrix adjust.
Identities = 196/247 (79%), Positives = 222/247 (89%)
Query: 1 MDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEF 60
MD S TRRGQPCWFRVP+VGM+A NDG+LLRNHI RILK HFRDKPYYVDL+DLFNEVE
Sbjct: 138 MDNSVTRRGQPCWFRVPQVGMVAINDGILLRNHIHRILKKHFRDKPYYVDLVDLFNEVEL 197
Query: 61 QTASGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYYSFYLPVACALLMAGENLDKHV 120
QTA GQMIDLITT EGEKDL+KYSL +HRRIVQYKTAYYSFYLPVACALLMAGENL+ H+
Sbjct: 198 QTACGQMIDLITTFEGEKDLAKYSLSIHRRIVQYKTAYYSFYLPVACALLMAGENLENHI 257
Query: 121 EVKDILVQMGIYFQVQDDFLDCFGSPEVIGKVGTDIEDYKCSWLVVKALELCNEEQKKLV 180
+VK++LV MGIYFQVQDD+LDCF PE +GK+GTDIED+KCSWLVVKALE C+EEQ K++
Sbjct: 258 DVKNVLVDMGIYFQVQDDYLDCFADPETLGKIGTDIEDFKCSWLVVKALERCSEEQTKIL 317
Query: 181 HENYGKVDPACVAKVKELYKTLDLEGAFVEYEKESYEKLTKSIEAHPTKEVQAVLKSFLA 240
+ENYGK DP+ VAKVK+LYK LDLEG F+EYE +SYEKLT +IE H +K +QAVLKSFLA
Sbjct: 318 YENYGKPDPSNVAKVKDLYKELDLEGVFMEYESKSYEKLTGAIEGHQSKAIQAVLKSFLA 377
Query: 241 KIYKRQK 247
KIYKRQK
Sbjct: 378 KIYKRQK 384
>sp|Q7XYT0|FPPS2_ARTSI Farnesyl diphosphate synthase 2 OS=Artemisia spiciformis GN=FDS-2
PE=1 SV=1
Length = 342
Score = 417 bits (1071), Expect = e-116, Method: Compositional matrix adjust.
Identities = 195/247 (78%), Positives = 222/247 (89%)
Query: 1 MDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEF 60
MD SHTRRGQPCWFR+PKVGMIA NDGV+LRNHI RILK HFR K YY DLLDLFNEVEF
Sbjct: 96 MDESHTRRGQPCWFRLPKVGMIAVNDGVVLRNHIPRILKKHFRGKAYYADLLDLFNEVEF 155
Query: 61 QTASGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYYSFYLPVACALLMAGENLDKHV 120
QTASGQMIDLITT+ G+K+LSKYSL H+RIV++KTAYYSFYLPVACALLM GENLD HV
Sbjct: 156 QTASGQMIDLITTLFGQKELSKYSLSTHQRIVKFKTAYYSFYLPVACALLMFGENLDDHV 215
Query: 121 EVKDILVQMGIYFQVQDDFLDCFGSPEVIGKVGTDIEDYKCSWLVVKALELCNEEQKKLV 180
+VKD+LV+MG YFQVQDD+LDCFGSPEVIGK+GTDIED+KCSWLVVKALEL +E+QKKL+
Sbjct: 216 QVKDVLVEMGTYFQVQDDYLDCFGSPEVIGKIGTDIEDFKCSWLVVKALELADEQQKKLL 275
Query: 181 HENYGKVDPACVAKVKELYKTLDLEGAFVEYEKESYEKLTKSIEAHPTKEVQAVLKSFLA 240
+ENYG+ DPA VAKVKELY TL+L+G F +YE +S+EK+ KSIE HP+K VQ VLKSFL
Sbjct: 276 NENYGRKDPASVAKVKELYHTLNLQGVFEDYENKSHEKIIKSIETHPSKAVQEVLKSFLG 335
Query: 241 KIYKRQK 247
KI+KRQK
Sbjct: 336 KIFKRQK 342
>sp|P49353|FPPS_MAIZE Farnesyl pyrophosphate synthase OS=Zea mays GN=FPS PE=2 SV=1
Length = 350
Score = 400 bits (1028), Expect = e-111, Method: Compositional matrix adjust.
Identities = 186/247 (75%), Positives = 216/247 (87%)
Query: 1 MDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEF 60
MD SHTRRGQPCWFRVP+VG+IAANDG++LRNHISRIL+ HF+ KPYY DLLDLFNEVEF
Sbjct: 104 MDDSHTRRGQPCWFRVPQVGLIAANDGIILRNHISRILRRHFKGKPYYADLLDLFNEVEF 163
Query: 61 QTASGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYYSFYLPVACALLMAGENLDKHV 120
+TASGQ++DLITT EGEKDL+KY++ +H RIVQYKTAYYSFYLPVACALL++GENLD +
Sbjct: 164 KTASGQLLDLITTHEGEKDLTKYNITVHGRIVQYKTAYYSFYLPVACALLLSGENLDNYG 223
Query: 121 EVKDILVQMGIYFQVQDDFLDCFGSPEVIGKVGTDIEDYKCSWLVVKALELCNEEQKKLV 180
+V++ILV+MG YFQVQDD+LDC+G PE IGK+GTDIEDYKCSWLVV+ALE +E QK+++
Sbjct: 224 DVENILVEMGTYFQVQDDYLDCYGDPEFIGKIGTDIEDYKCSWLVVQALERADESQKRIL 283
Query: 181 HENYGKVDPACVAKVKELYKTLDLEGAFVEYEKESYEKLTKSIEAHPTKEVQAVLKSFLA 240
ENYGK DPACVAKVK LYK LDLE F EYE ESY+KL IEA P+ VQ VLKSFL
Sbjct: 284 FENYGKKDPACVAKVKNLYKELDLEAVFQEYENESYKKLIADIEAQPSIAVQKVLKSFLH 343
Query: 241 KIYKRQK 247
KIYKRQK
Sbjct: 344 KIYKRQK 350
>sp|P0C565|CPPAS_TANCI Chrysanthemyl diphosphate synthase, chloroplastic OS=Tanacetum
cinerariifolium PE=1 SV=1
Length = 395
Score = 360 bits (924), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 169/247 (68%), Positives = 203/247 (82%)
Query: 1 MDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEF 60
MDGSHTRRGQPCWFR+P+VG++A NDGVLLRNH+ RILK +F+ KPYYV LLDLFNE EF
Sbjct: 149 MDGSHTRRGQPCWFRLPEVGVVAINDGVLLRNHVHRILKKYFQGKPYYVHLLDLFNETEF 208
Query: 61 QTASGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYYSFYLPVACALLMAGENLDKHV 120
QT SGQMID I + G+KDLSKY++ L+RRIVQYK +YYS YLP+ACALLM GENL+ HV
Sbjct: 209 QTISGQMIDTICRLAGQKDLSKYTMTLNRRIVQYKGSYYSCYLPIACALLMFGENLEDHV 268
Query: 121 EVKDILVQMGIYFQVQDDFLDCFGSPEVIGKVGTDIEDYKCSWLVVKALELCNEEQKKLV 180
+VKDILV++G+Y+Q+Q+D+LD FG P+V GK GTDIE+ KCSWL+ KALEL NEEQKK++
Sbjct: 269 QVKDILVELGMYYQIQNDYLDTFGDPDVFGKTGTDIEECKCSWLIAKALELANEEQKKIL 328
Query: 181 HENYGKVDPACVAKVKELYKTLDLEGAFVEYEKESYEKLTKSIEAHPTKEVQAVLKSFLA 240
ENYG DP+ VAKVKELY LDL+GA+ +YE YE SI+AHP VQAVLKS L
Sbjct: 329 SENYGINDPSKVAKVKELYHALDLKGAYEDYETNLYETSMTSIKAHPNIAVQAVLKSCLE 388
Query: 241 KIYKRQK 247
K+YK K
Sbjct: 389 KMYKGHK 395
>sp|Q7XYS8|CHRDS_ARTSI Monoterpene synthase FDS-5, chloroplastic OS=Artemisia spiciformis
GN=FDS-5 PE=1 SV=1
Length = 394
Score = 359 bits (922), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 168/247 (68%), Positives = 203/247 (82%)
Query: 1 MDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEF 60
MDGSHTRRGQPCWFR+P+VG +A NDGVLLRNH+ RILK HF+ K YYV L+DLFNE EF
Sbjct: 148 MDGSHTRRGQPCWFRLPEVGAVAINDGVLLRNHVHRILKKHFQGKAYYVHLVDLFNETEF 207
Query: 61 QTASGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYYSFYLPVACALLMAGENLDKHV 120
QT SGQMID I+ + G+K+LSKYS+ L+RRIVQYK AYYS YLP+ACALLM GENLD +V
Sbjct: 208 QTISGQMIDTISRLAGQKELSKYSMSLNRRIVQYKGAYYSCYLPIACALLMFGENLDDYV 267
Query: 121 EVKDILVQMGIYFQVQDDFLDCFGSPEVIGKVGTDIEDYKCSWLVVKALELCNEEQKKLV 180
+VKDILV++G+Y+Q+Q+D+LD FG P V GK GTDIE+ KCSWL+ KALEL NEEQKK++
Sbjct: 268 QVKDILVELGMYYQIQNDYLDTFGDPNVFGKTGTDIEECKCSWLIAKALELANEEQKKIL 327
Query: 181 HENYGKVDPACVAKVKELYKTLDLEGAFVEYEKESYEKLTKSIEAHPTKEVQAVLKSFLA 240
ENYG DPA VAKVKE+Y L+L+GA+ +YE YE K+I+AHP+ VQAVLKS L
Sbjct: 328 SENYGIKDPAKVAKVKEIYHALNLKGAYEDYETNLYENSMKAIKAHPSIAVQAVLKSCLE 387
Query: 241 KIYKRQK 247
K+YK K
Sbjct: 388 KMYKGHK 394
>sp|P08524|FPPS_YEAST Farnesyl pyrophosphate synthase OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=ERG20 PE=1 SV=2
Length = 352
Score = 262 bits (670), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 130/250 (52%), Positives = 180/250 (72%), Gaps = 3/250 (1%)
Query: 1 MDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEF 60
MD S TRRGQPCW++VP+VG IA ND +L I ++LK+HFR++ YY+D+ +LF+EV F
Sbjct: 103 MDKSITRRGQPCWYKVPEVGEIAINDAFMLEAAIYKLLKSHFRNEKYYIDITELFHEVTF 162
Query: 61 QTASGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYYSFYLPVACALLMAGENLDKHV 120
QT GQ++DLIT E + DLSK+SL H IV +KTAYYSFYLPVA A+ +AG +K +
Sbjct: 163 QTELGQLMDLITAPEDKVDLSKFSLKKHSFIVTFKTAYYSFYLPVALAMYVAGITDEKDL 222
Query: 121 -EVKDILVQMGIYFQVQDDFLDCFGSPEVIGKVGTDIEDYKCSWLVVKALELCNEEQKKL 179
+ +D+L+ +G YFQ+QDD+LDCFG+PE IGK+GTDI+D KCSW++ KALEL + EQ+K
Sbjct: 223 KQARDVLIPLGEYFQIQDDYLDCFGTPEQIGKIGTDIQDNKCSWVINKALELASAEQRKT 282
Query: 180 VHENYGKVDPACVAKVKELYKTLDLEGAFVEYEKESYEKLTKSI-EAHPTKEVQA-VLKS 237
+ ENYGK D AK K+++ L +E + EYE+ + L I + ++ +A VL +
Sbjct: 283 LDENYGKKDSVAEAKCKKIFNDLKIEQLYHEYEESIAKDLKAKISQVDESRGFKADVLTA 342
Query: 238 FLAKIYKRQK 247
FL K+YKR K
Sbjct: 343 FLNKVYKRSK 352
>sp|P08836|FPPS_CHICK Farnesyl pyrophosphate synthase OS=Gallus gallus GN=FDPS PE=1 SV=2
Length = 367
Score = 256 bits (654), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 125/248 (50%), Positives = 172/248 (69%), Gaps = 1/248 (0%)
Query: 1 MDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEF 60
MD S TRRGQ CW++ VG+ A ND LL + + R+LK + R +PYYV LL+LF + +
Sbjct: 120 MDQSLTRRGQLCWYKKEGVGLDAINDSFLLESSVYRVLKKYCRQRPYYVHLLELFLQTAY 179
Query: 61 QTASGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYYSFYLPVACALLMAG-ENLDKH 119
QT GQM+DLIT + DLS +S ++ IV+YKTA+YSFYLPVA A+ M G ++ ++H
Sbjct: 180 QTELGQMLDLITAPVSKVDLSHFSEERYKAIVKYKTAFYSFYLPVAAAMYMVGIDSKEEH 239
Query: 120 VEVKDILVQMGIYFQVQDDFLDCFGSPEVIGKVGTDIEDYKCSWLVVKALELCNEEQKKL 179
K IL++MG YFQ+QDD+LDCFG P + GKVGTDI+D KCSWLVV+ L+ EQ++L
Sbjct: 240 ENAKAILLEMGEYFQIQDDYLDCFGDPALTGKVGTDIQDNKCSWLVVQCLQRVTPEQRQL 299
Query: 180 VHENYGKVDPACVAKVKELYKTLDLEGAFVEYEKESYEKLTKSIEAHPTKEVQAVLKSFL 239
+ +NYG+ +P VAKVKELY+ + + AF +YE+ SY +L + IE H + + +
Sbjct: 300 LEDNYGRKEPEKVAKVKELYEAVGMRAAFQQYEESSYRRLQELIEKHSNRLPKEIFLGLA 359
Query: 240 AKIYKRQK 247
KIYKRQK
Sbjct: 360 QKIYKRQK 367
>sp|Q920E5|FPPS_MOUSE Farnesyl pyrophosphate synthase OS=Mus musculus GN=Fdps PE=2 SV=1
Length = 353
Score = 251 bits (642), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 122/248 (49%), Positives = 172/248 (69%), Gaps = 1/248 (0%)
Query: 1 MDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEF 60
MD S TRRGQ CW++ P +G+ A ND +LL I R+LK + R++PYY++LL+LF + +
Sbjct: 106 MDSSLTRRGQICWYQKPGIGLDAINDALLLEASIYRLLKFYCREQPYYLNLLELFLQSSY 165
Query: 61 QTASGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYYSFYLPVACALLMAGENLDK-H 119
QT GQ +DL+T +G DL +Y+ ++ IV+YKTA+YSFYLP+A A+ MAG + +K H
Sbjct: 166 QTEIGQTLDLMTAPQGHVDLGRYTEKRYKSIVKYKTAFYSFYLPIAAAMYMAGIDGEKEH 225
Query: 120 VEVKDILVQMGIYFQVQDDFLDCFGSPEVIGKVGTDIEDYKCSWLVVKALELCNEEQKKL 179
IL++MG +FQVQDD+LD FG P V GKVGTDI+D KCSWLVV+ L + +Q+++
Sbjct: 226 ANALKILMEMGEFFQVQDDYLDLFGDPSVTGKVGTDIQDNKCSWLVVQCLLRASPQQRQI 285
Query: 180 VHENYGKVDPACVAKVKELYKTLDLEGAFVEYEKESYEKLTKSIEAHPTKEVQAVLKSFL 239
+ ENYG+ DP VA+VK LY+ LDL+ AF +YE++SY +L IE ++
Sbjct: 286 LEENYGQKDPEKVARVKALYEALDLQSAFFKYEEDSYNRLKSLIEQCSAPLPPSIFMELA 345
Query: 240 AKIYKRQK 247
KIYKR+K
Sbjct: 346 NKIYKRRK 353
>sp|P05369|FPPS_RAT Farnesyl pyrophosphate synthase OS=Rattus norvegicus GN=Fdps PE=2
SV=2
Length = 353
Score = 250 bits (638), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 121/248 (48%), Positives = 171/248 (68%), Gaps = 1/248 (0%)
Query: 1 MDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEF 60
MD S+TRRGQ CW++ P +G+ A ND +LL I R+LK + R++PYY++LL+LF + +
Sbjct: 106 MDSSYTRRGQICWYQKPGIGLDAINDALLLEAAIYRLLKFYCREQPYYLNLLELFLQSSY 165
Query: 61 QTASGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYYSFYLPVACALLMAGENLDK-H 119
QT GQ +DLIT +G+ DL +Y+ ++ IV+YKTA+YSFYLP+A A+ MAG + +K H
Sbjct: 166 QTEIGQTLDLITAPQGQVDLGRYTEKRYKSIVKYKTAFYSFYLPIAAAMYMAGIDGEKEH 225
Query: 120 VEVKDILVQMGIYFQVQDDFLDCFGSPEVIGKVGTDIEDYKCSWLVVKALELCNEEQKKL 179
IL++MG +FQ+QDD+LD FG P V GKVGTDI+D KCSWLVV+ L +Q+++
Sbjct: 226 ANALKILLEMGEFFQIQDDYLDLFGDPSVTGKVGTDIQDNKCSWLVVQCLLRATPQQRQI 285
Query: 180 VHENYGKVDPACVAKVKELYKTLDLEGAFVEYEKESYEKLTKSIEAHPTKEVQAVLKSFL 239
+ ENYG+ DP VA+VK LY+ LDL F +YE++SY +L IE ++
Sbjct: 286 LEENYGQKDPEKVARVKALYEELDLRSVFFKYEEDSYNRLKSLIEQCSAPLPPSIFLELA 345
Query: 240 AKIYKRQK 247
KIYKR+K
Sbjct: 346 NKIYKRRK 353
>sp|Q8WMY2|FPPS_BOVIN Farnesyl pyrophosphate synthase OS=Bos taurus GN=FDPS PE=1 SV=1
Length = 353
Score = 247 bits (630), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 116/248 (46%), Positives = 172/248 (69%), Gaps = 1/248 (0%)
Query: 1 MDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEF 60
MD S TRRGQ CW++ P +G+ A ND LL + I R+LK + R++PYY+DL++LF + +
Sbjct: 106 MDSSLTRRGQTCWYQKPGIGLDAINDAFLLESSIYRLLKLYCREQPYYLDLIELFLQSSY 165
Query: 61 QTASGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYYSFYLPVACALLMAGENLDK-H 119
QT GQ +DLIT +G DL +++ ++ IV+YKTA+YSFYLPVA A+ MAG + +K H
Sbjct: 166 QTEIGQTLDLITAPQGNVDLGRFTEKRYKSIVKYKTAFYSFYLPVAAAMYMAGIDGEKEH 225
Query: 120 VEVKDILVQMGIYFQVQDDFLDCFGSPEVIGKVGTDIEDYKCSWLVVKALELCNEEQKKL 179
K IL++MG +FQ+QDD+LD FG P + GK+GTDI+D KCSWLVV+ L+ + EQ+++
Sbjct: 226 AHAKKILLEMGEFFQIQDDYLDLFGDPSMTGKIGTDIQDNKCSWLVVQCLQRASPEQRQI 285
Query: 180 VHENYGKVDPACVAKVKELYKTLDLEGAFVEYEKESYEKLTKSIEAHPTKEVQAVLKSFL 239
+ ENYG+ + VA+VK LY+ ++L +++YE++SY + IE + A+
Sbjct: 286 LQENYGQKEAEKVARVKALYEEMNLSAVYMQYEEDSYNHIMGLIEQYAAPLPPAIFLGLA 345
Query: 240 AKIYKRQK 247
KIYKR+K
Sbjct: 346 QKIYKRKK 353
>sp|Q92250|FPPS_NEUCR Farnesyl pyrophosphate synthase OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=fpp PE=3 SV=2
Length = 347
Score = 243 bits (619), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 129/253 (50%), Positives = 168/253 (66%), Gaps = 9/253 (3%)
Query: 1 MDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEF 60
MD S TRRG+PCW+R VGM+A ND +L + I +LK +FR P YVD L+LF+EV F
Sbjct: 98 MDSSITRRGKPCWYRQEGVGMVAINDAFMLESAIYTLLKKYFRSHPRYVDFLELFHEVTF 157
Query: 61 QTASGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYYSFYLPVACALLM----AGENL 116
QT GQ+ DL+T E + DL +S+ + IV YKTAYYSFYLPVA A+ M ENL
Sbjct: 158 QTEMGQLCDLLTAPEDKVDLDNFSMDKYTFIVIYKTAYYSFYLPVALAMYMLDIATPENL 217
Query: 117 DKHVEVKDILVQMGIYFQVQDDFLDCFGSPEVIGKVGTDIEDYKCSWLVVKALELCNEEQ 176
+ +DIL+ +G YFQVQDD+LD FG PE IGK+GTDI+D KCSWLV KAL + EQ
Sbjct: 218 K---QAEDILIPLGEYFQVQDDYLDNFGLPEHIGKIGTDIQDNKCSWLVNKALSIVTPEQ 274
Query: 177 KKLVHENYGKVDPACVAKVKELYKTLDLEGAFVEYEKESYEKLTKSIEAHPTKE--VQAV 234
+K + ENYG+ D A A +K+LY L LE + +YE+E ++ K I+A + + V
Sbjct: 275 RKTLEENYGRKDKAKEAVIKQLYDDLKLEDHYKQYEEERVGEIRKMIDAIDESKGLKKQV 334
Query: 235 LKSFLAKIYKRQK 247
++FL KIYKR K
Sbjct: 335 FEAFLGKIYKRSK 347
>sp|P14324|FPPS_HUMAN Farnesyl pyrophosphate synthase OS=Homo sapiens GN=FDPS PE=1 SV=4
Length = 419
Score = 242 bits (617), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 119/248 (47%), Positives = 169/248 (68%), Gaps = 1/248 (0%)
Query: 1 MDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEF 60
MD S TRRGQ CW++ P VG+ A ND LL I R+LK + R++PYY++L++LF + +
Sbjct: 172 MDSSLTRRGQICWYQKPGVGLDAINDANLLEACIYRLLKLYCREQPYYLNLIELFLQSSY 231
Query: 61 QTASGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYYSFYLPVACALLMAGENLDK-H 119
QT GQ +DL+T +G DL +++ ++ IV+YKTA+YSFYLP+A A+ MAG + +K H
Sbjct: 232 QTEIGQTLDLLTAPQGNVDLVRFTEKRYKSIVKYKTAFYSFYLPIAAAMYMAGIDGEKEH 291
Query: 120 VEVKDILVQMGIYFQVQDDFLDCFGSPEVIGKVGTDIEDYKCSWLVVKALELCNEEQKKL 179
K IL++MG +FQ+QDD+LD FG P V GK+GTDI+D KCSWLVV+ L+ EQ ++
Sbjct: 292 ANAKKILLEMGEFFQIQDDYLDLFGDPSVTGKIGTDIQDNKCSWLVVQCLQRATPEQYQI 351
Query: 180 VHENYGKVDPACVAKVKELYKTLDLEGAFVEYEKESYEKLTKSIEAHPTKEVQAVLKSFL 239
+ ENYG+ + VA+VK LY+ LDL F++YE++SY + IE + AV
Sbjct: 352 LKENYGQKEAEKVARVKALYEELDLPAVFLQYEEDSYSHIMALIEQYAAPLPPAVFLGLA 411
Query: 240 AKIYKRQK 247
KIYKR+K
Sbjct: 412 RKIYKRRK 419
>sp|O14230|FPPS_SCHPO Farnesyl pyrophosphate synthase OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=fps1 PE=1 SV=1
Length = 347
Score = 240 bits (612), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 119/250 (47%), Positives = 167/250 (66%), Gaps = 3/250 (1%)
Query: 1 MDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEF 60
MD S TRRGQPCW+ +P VG IA ND ++ + I +LK HFR + YVDL++LF++V F
Sbjct: 98 MDASKTRRGQPCWYLMPGVGNIAINDAFMVESAIYFLLKKHFRQESCYVDLIELFHDVTF 157
Query: 61 QTASGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYYSFYLPVACALLMAGENLDKHV 120
QT GQ +DL+T E DLSK+SL H IV YKTA+YSFYLPVA A+ +AG +++
Sbjct: 158 QTELGQQLDLLTAPEDSVDLSKFSLQKHSFIVIYKTAFYSFYLPVALAMHLAGVATPENL 217
Query: 121 E-VKDILVQMGIYFQVQDDFLDCFGSPEVIGKVGTDIEDYKCSWLVVKALELCNEEQKKL 179
+ +DIL+ +G YFQVQDD+LDC+G P V GK+GTDI D KCSW++ AL C EQ+ +
Sbjct: 218 KCAQDILIILGKYFQVQDDYLDCYGDPTVTGKIGTDILDNKCSWIINLALAKCTPEQRVI 277
Query: 180 VHENYGKVDPACVAKVKELYKTLDLEGAFVEYEKESYEKLTKSIEA--HPTKEVQAVLKS 237
+ +NYG+ D +VK +++ L++ G F YE+ ++ K I+ T +++ +
Sbjct: 278 LDDNYGRKDSESEKRVKAVFEELNIRGEFENYEESEVSEIKKLIDGVDESTGLKKSIFTT 337
Query: 238 FLAKIYKRQK 247
FL KIYKR K
Sbjct: 338 FLGKIYKRNK 347
>sp|P49349|FPPS_KLULA Farnesyl pyrophosphate synthase OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=FPS1 PE=3 SV=1
Length = 349
Score = 240 bits (612), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 124/250 (49%), Positives = 169/250 (67%), Gaps = 3/250 (1%)
Query: 1 MDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEF 60
MD S TRRGQPCW++V VG IA ND +L I +LK HFR +PYYVDLL+LF++V F
Sbjct: 100 MDQSITRRGQPCWYKVENVGDIAINDAFMLEGAIYCLLKKHFRTEPYYVDLLELFHDVTF 159
Query: 61 QTASGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYYSFYLPVACALLMAGENLDKHV 120
QT GQ++DLIT E + DLSK+SL H IV +KTAYYSFYL VA A+ AG K +
Sbjct: 160 QTELGQLLDLITAPEDKVDLSKFSLEKHSFIVIFKTAYYSFYLAVALAMFAAGITDSKDL 219
Query: 121 -EVKDILVQMGIYFQVQDDFLDCFGSPEVIGKVGTDIEDYKCSWLVVKALELCNEEQKKL 179
+ D+L+ +G YFQ+QDDFLDCFG PE IGK+GTDI+D KCSW++ AL+ +EQ+ +
Sbjct: 220 KQASDVLIPLGEYFQIQDDFLDCFGKPEDIGKIGTDIQDNKCSWVINVALKNATKEQRDI 279
Query: 180 VHENYGKVDPACVAKVKELYKTLDLEGAFVEYEKESYEKLTKSI-EAHPTKEVQA-VLKS 237
+ ENYG+ D K + ++ L+++ + +YE+E+ L + I ++ +A VL
Sbjct: 280 LDENYGRKDSEKEQKCRAVFNELNIQDIYHKYEEETASNLREKIANIDESRGFKAEVLTL 339
Query: 238 FLAKIYKRQK 247
FL KIY R+K
Sbjct: 340 FLNKIYHRKK 349
>sp|Q9NH03|FPS_DICDI Farnesyl diphosphate synthase OS=Dictyostelium discoideum GN=fps
PE=2 SV=1
Length = 382
Score = 231 bits (589), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 124/256 (48%), Positives = 165/256 (64%), Gaps = 16/256 (6%)
Query: 1 MDGSHTRRGQPCWFRVPK-------VGMIAANDGVLLRNHISRILKNHFRDKPYYVDLLD 53
MD S TRRGQPCW+R +G IA ND +L + I ++K +FR++PYY D+LD
Sbjct: 130 MDQSITRRGQPCWYRQANPISNNGTIGSIAINDSFILESCIYILIKKYFRNEPYYADILD 189
Query: 54 LFNEVEFQTASGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYYSFYLPVACALLMAG 113
+F+E +QT GQ++DL TT D S ++L +RRIV+YKTAYYSFYLPVA A+LMAG
Sbjct: 190 IFHETSYQTELGQLLDL-TTQPNRGDFSLFTLNTYRRIVKYKTAYYSFYLPVALAMLMAG 248
Query: 114 -ENLDKHVEVKDILVQMGIYFQVQDDFLDCFGSPEVIGKVGTDIEDYKCSWLVVKALELC 172
+ KDIL+ MG +FQVQDDFLDC+GSP VIGK+G DIE+ KCSW++ +A+
Sbjct: 249 ITSTPAFSTAKDILLPMGEFFQVQDDFLDCYGSPAVIGKIGRDIEENKCSWMICQAILNG 308
Query: 173 NEEQKKLVHENYGKVDPACVAKVKELYKTLDLEGAFVEYEKESYEKL---TKSIEAHPTK 229
EQ L+ ++YG +P V VK++Y + L+ F +YE ESY L KS+ P
Sbjct: 309 TPEQINLLKKHYGLDNPTDVELVKKIYGEIGLKKIFKDYEDESYAFLISKIKSVRIMP-- 366
Query: 230 EVQAVLKSFLAKIYKR 245
Q V L+KIYKR
Sbjct: 367 --QEVFIKLLSKIYKR 380
>sp|Q92235|FPPS_GIBFU Farnesyl pyrophosphate synthase OS=Gibberella fujikuroi GN=FPPS
PE=3 SV=1
Length = 347
Score = 230 bits (586), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 123/253 (48%), Positives = 164/253 (64%), Gaps = 9/253 (3%)
Query: 1 MDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEF 60
MD S TRRGQPCW+R VGMIA ND +L + I +LK +FR P Y DL++ F+E F
Sbjct: 98 MDSSITRRGQPCWYRQEGVGMIAINDAFMLESAIYTLLKKYFRSHPAYFDLIESFHETTF 157
Query: 61 QTASGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYYSFYLPVACAL----LMAGENL 116
QT GQ+ DL+T E +L +SL + IV YKTAYYSFYLPVA AL L NL
Sbjct: 158 QTELGQLCDLLTAPEDNVNLDNFSLEKYSFIVIYKTAYYSFYLPVALALHQLNLATPSNL 217
Query: 117 DKHVEVKDILVQMGIYFQVQDDFLDCFGSPEVIGKVGTDIEDYKCSWLVVKALELCNEEQ 176
+ +DIL+ +G YFQ+QDD+LD FG PE IGK+GTDI+D KCSWLV +AL + EQ
Sbjct: 218 K---QAEDILIPLGEYFQIQDDYLDNFGKPEHIGKIGTDIKDNKCSWLVNQALAVATPEQ 274
Query: 177 KKLVHENYGKVDPACVAKVKELYKTLDLEGAFVEYEKESYEKLTKSIEAHPTKE--VQAV 234
+K++ ENYG+ D VK+LY L+LE +++YE++ ++ + I + + V
Sbjct: 275 RKILEENYGRKDDEKEKVVKKLYDDLNLEQRYLDYEEKVVGQIRERIANIDENDGLKKTV 334
Query: 235 LKSFLAKIYKRQK 247
++FLAKIYKR K
Sbjct: 335 FEAFLAKIYKRSK 347
>sp|Q54XP1|Y8823_DICDI Probable farnesyl diphosphate synthase DDB_G0278823
OS=Dictyostelium discoideum GN=DDB_G0278823 PE=3 SV=1
Length = 356
Score = 212 bits (539), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 111/255 (43%), Positives = 164/255 (64%), Gaps = 10/255 (3%)
Query: 1 MDGSHTRRGQPCWFRVPK------VGMIAANDGVLLRNHISRILKNHFRDKPYYVDLLDL 54
MD S RRG+PCW++ + VG+ A ND ++ + + +L+ +F+++ YY+++++L
Sbjct: 104 MDQSLKRRGKPCWYKQKRPNSDQEVGLAAINDSFIIESCVFILLEKYFKNESYYLNIVEL 163
Query: 55 FNEVEFQTASGQMIDLITT-IEGEKDLSKYSLPLHRRIVQYKTAYYSFYLPVACALLMAG 113
F++ FQT GQ++DL T I G D S +L H RI +YKTAYYSF+ PVA A+LM+
Sbjct: 164 FHKTGFQTQLGQLLDLTTQPIRG--DFSSINLKNHTRITEYKTAYYSFFFPVALAMLMSK 221
Query: 114 ENLDK-HVEVKDILVQMGIYFQVQDDFLDCFGSPEVIGKVGTDIEDYKCSWLVVKALELC 172
N ++ KDIL+ MG+YFQVQDDFLDC+GSPEV GK+G DIE+ KCSW++ +A+
Sbjct: 222 INHEQAFTTAKDILLPMGVYFQVQDDFLDCYGSPEVFGKIGRDIEENKCSWMICQAILNG 281
Query: 173 NEEQKKLVHENYGKVDPACVAKVKELYKTLDLEGAFVEYEKESYEKLTKSIEAHPTKEVQ 232
+Q L+ ++YG +P V VK++YK ++LE F +YE SY L I+
Sbjct: 282 TPDQINLLKKHYGFDNPTDVEIVKKIYKEINLEKIFKDYENTSYNFLIDKIKTTCIYLPP 341
Query: 233 AVLKSFLAKIYKRQK 247
+V L+KIYKR K
Sbjct: 342 SVFLKILSKIYKRDK 356
>sp|O59703|GGPPS_SCHPO Geranylgeranyl pyrophosphate synthase OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=spo9 PE=1 SV=1
Length = 351
Score = 184 bits (467), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 100/250 (40%), Positives = 147/250 (58%), Gaps = 4/250 (1%)
Query: 1 MDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEF 60
MD S RRG CW+ V V A N+ LL I +++ +FR+ PYYVDLLD F EV F
Sbjct: 103 MDQSIKRRGLDCWYLVVGVRR-AINESQLLEACIPLLIRKYFRNMPYYVDLLDTFREVTF 161
Query: 61 QTASGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYYSFYLPVACALLMAGENLDKHV 120
T GQ DL+++ +GE L + L + I+ YKT++YSFYLP+ CALL++ + K
Sbjct: 162 LTELGQQEDLLSSRDGEASLRSFDLMKYDFIITYKTSFYSFYLPIKCALLLSRNSNQKAY 221
Query: 121 EVKDILVQM-GIYFQVQDDFLDCFGSPEVIGKVGTDIEDYKCSWLVVKALELCNEEQKKL 179
+ L ++ G YFQVQDD+LDCFG V+GKVG DI+D KC+WLV A + + +Q L
Sbjct: 222 DTTIKLSKLLGYYFQVQDDYLDCFGDYTVLGKVGMDIQDNKCTWLVCYAEKFASADQLNL 281
Query: 180 VHENYGKVDPACVAKVKELYKTLDLEGAFVEYEKESYEKLTKSIEA--HPTKEVQAVLKS 237
+ +YGK +A +K+LY L + + ++E + + ++K I+ T + +
Sbjct: 282 LRAHYGKAGSENIAVIKQLYHELQIPELYHKFEDDMVDSISKEIDLIDESTGLKKCIFTK 341
Query: 238 FLAKIYKRQK 247
F IYKR +
Sbjct: 342 FFQLIYKRSR 351
>sp|Q55EU7|Y8742_DICDI Probable farnesyl diphosphate synthase DDB_G0268742
OS=Dictyostelium discoideum GN=DDB_G0268742 PE=3 SV=1
Length = 393
Score = 176 bits (447), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 92/252 (36%), Positives = 145/252 (57%), Gaps = 28/252 (11%)
Query: 1 MDGSHTRRGQPCWFRVP--------KVGMIAANDGVLLRNHISRILKNHFRDKPYYVDLL 52
MD TRRG+ CW+R P KVGM+A ND VL+ + + ILK +F++K YYVDL
Sbjct: 117 MDNGLTRRGELCWYRHPSPFNPTEHKVGMLAINDSVLIESFLFFILKKYFKNKSYYVDLF 176
Query: 53 DLFNEVEFQTASGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYYSFYLPVACALLMA 112
+LF+E F TA+GQ++D + D + ++ + +I K++++ FYL + A+L+
Sbjct: 177 ELFHESIFYTATGQLLDSSSFHLKRGDFTNFTFENYSQICINKSSHHVFYLQIKIAILLT 236
Query: 113 G--ENLDKHVE------------------VKDILVQMGIYFQVQDDFLDCFGSPEVIGKV 152
+N +K + +K+I +GIY Q QDD+ DCFG P+VIGK
Sbjct: 237 DIMDNNEKQKDDTTCKEEKDKEKEQEEELIKNICFNLGIYGQAQDDYFDCFGDPKVIGKT 296
Query: 153 GTDIEDYKCSWLVVKALELCNEEQKKLVHENYGKVDPACVAKVKELYKTLDLEGAFVEYE 212
GTDI++ KCSWL+ KA +CN +Q + +NYG + V+ VK ++K +++ + +E
Sbjct: 297 GTDIQENKCSWLICKANTICNNDQLNQLKKNYGNDNENDVSIVKSIFKEINIPKHYENFE 356
Query: 213 KESYEKLTKSIE 224
E Y + K I+
Sbjct: 357 NEQYNSILKEIQ 368
>sp|P39464|GGPS_SULAC Geranylgeranyl diphosphate synthase OS=Sulfolobus acidocaldarius
(strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 /
NCIMB 11770) GN=gds PE=1 SV=1
Length = 330
Score = 60.8 bits (146), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 87/189 (46%), Gaps = 12/189 (6%)
Query: 1 MDGSHTRRGQPCWFRVPKVGM-IAANDGVLLRNHISRILKNHFRDKP--YYVDLLDLFNE 57
MD + RRG P K G+ +A G LL ++L R P + D+F
Sbjct: 85 MDQDNIRRGLPTVH--VKYGLPLAILAGDLLHAKAFQLLTQALRGLPSETIIKAFDIFTR 142
Query: 58 VEFQTASGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYYSFYLPVACALLMAGENLD 117
+ GQ +D+ E D+ + + ++ KTA F + L+AG N +
Sbjct: 143 SIIIISEGQAVDM--EFEDRIDIKEQE---YLDMISRKTAAL-FSASSSIGALIAGANDN 196
Query: 118 KHVEVKDILVQMGIYFQVQDDFLDCFGSPEVIGK-VGTDIEDYKCSWLVVKALELCNEEQ 176
+ D +GI FQ+ DD L + +GK V +DI + K + LV+K LELC E++
Sbjct: 197 DVRLMSDFGTNLGIAFQIVDDILGLTADEKELGKPVFSDIREGKKTILVIKTLELCKEDE 256
Query: 177 KKLVHENYG 185
KK+V + G
Sbjct: 257 KKIVLKALG 265
>sp|Q58270|IDSA_METJA Short chain isoprenyl diphosphate synthase OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=idsA PE=3 SV=1
Length = 327
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 106/220 (48%), Gaps = 24/220 (10%)
Query: 1 MDGSHTRRGQPCWFRVPKVGM-IAANDGVLLR--NHISRILKNHFRDKPYYVDLLDLFNE 57
MD RRG+P V M I A D + + +SRI +D ++L + ++
Sbjct: 90 MDNDDERRGKPTVHVVYGEPMAILAGDLLYAKAFEAVSRI-----KDNKKAHEVLKILSK 144
Query: 58 VEFQTASGQMIDLITTIEGEKDLSKY--SLPLHRRIVQYKTAYYSFYLPVACALLMAGEN 115
+ GQ +D+ + Y ++ + +++ KT V +MA N
Sbjct: 145 ACVEVCEGQAMDM--------EFENYYPTMEEYLDMIRKKTGAL-LEASVGIGAVMADCN 195
Query: 116 LDKHVEVKDILVQMGIYFQVQDDFLDCFGSPEVIGK-VGTDIEDYKCSWLVVKALELCNE 174
++ +K+ ++G+ FQ+QDD LD G + +GK VG+DI + K + +V+ AL+ +E
Sbjct: 196 EEEREALKEYAKRIGLTFQIQDDVLDLIGDQKKLGKPVGSDIREGKKTIIVIHALKTLDE 255
Query: 175 EQKKLVHENYGKVDPACVAKVKELYKTLDLEGAFVEYEKE 214
++KK + E G + K +E+ + +++ +EY KE
Sbjct: 256 DKKKRLLEILGNKN----VKDEEIKEAIEILKPSIEYAKE 291
>sp|Q53479|IDSA_METTM Short chain isoprenyl diphosphate synthase OS=Methanothermobacter
marburgensis (strain DSM 2133 / 14651 / NBRC 100331 /
OCM 82 / Marburg) GN=idsA PE=1 SV=3
Length = 325
Score = 54.3 bits (129), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 129 MGIYFQVQDDFLDCFGSPEVIGK-VGTDIEDYKCSWLVVKALELCNEEQKKLVHENYGKV 187
+G+ FQ+ DD+LD E +GK VG+DI + K + +VVKALE +EE ++ + G
Sbjct: 206 IGLAFQIHDDYLDVVSDEESLGKPVGSDIAEGKMTLMVVKALEEASEEDRERLISILGSG 265
Query: 188 DPACVAKVKELYK 200
D VA+ E+++
Sbjct: 266 DEGSVAEAIEIFE 278
>sp|O26156|IDSA_METTH Short chain isoprenyl diphosphate synthase OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=idsA PE=3 SV=1
Length = 325
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 129 MGIYFQVQDDFLDCFGSPEVIGK-VGTDIEDYKCSWLVVKALELCNEEQKKLVHENYGKV 187
+G+ FQ+ DD+LD E +GK VG+DI + K + +VVKALE +E+ ++ + G
Sbjct: 206 IGLAFQIHDDYLDVVSDEESLGKPVGSDIAEGKMTLMVVKALERASEKDRERLISILGSG 265
Query: 188 DPACVAKVKELYK 200
D VA+ E+++
Sbjct: 266 DEKLVAEAIEIFE 278
>sp|P54383|ISPA_BACSU Farnesyl diphosphate synthase OS=Bacillus subtilis (strain 168)
GN=ispA PE=3 SV=2
Length = 296
Score = 52.0 bits (123), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 81/171 (47%), Gaps = 16/171 (9%)
Query: 7 RRGQPCWFRV-PKVGMIAANDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQTAS- 64
RRG+P +V + + A DG+L + +++ +H D+ L L NE+ +
Sbjct: 96 RRGKPTNHKVFGEATAVLAGDGLLTESF--KLITSHVSDEVSAEKRLRLVNELISAAGTE 153
Query: 65 ----GQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYYSFYLPVACALLMAGENLDKHV 120
GQ+ D+ E + + +L I + KTA + +A A+L D
Sbjct: 154 GMVGGQVADM------EAENRQVTLEELESIHERKTAKLLGFCVIAGAILADAPEEDIET 207
Query: 121 EVKDILVQMGIYFQVQDDFLDCFGSPEVIGK-VGTDIEDYKCSWLVVKALE 170
++ +GI FQ++DD LD GS E IGK VG+D + K ++ + +LE
Sbjct: 208 -LRTFSSHIGIGFQIRDDILDLEGSEEKIGKRVGSDTTNDKSTYPSLLSLE 257
>sp|Q08291|ISPA_GEOSE Farnesyl diphosphate synthase OS=Geobacillus stearothermophilus
PE=1 SV=1
Length = 297
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 87/211 (41%), Gaps = 13/211 (6%)
Query: 1 MDGSHTRRGQPCWFRVPKVGM-IAANDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVE 59
MD RRG+P +V M I A DG LL I + P V L + +
Sbjct: 91 MDNDDLRRGKPTNHKVFGEAMAILAGDG-LLTYAFQLITEIDDERIPPSVRLRLIERLAK 149
Query: 60 FQTASGQMIDLITTIEGE-KDLSKYSLPLHRRIVQYKTAYYSFYLPVACALLMAGENLDK 118
G + +EGE K L+ L R K YS + L+ G + +
Sbjct: 150 AAGPEGMVAGQAADMEGEGKTLTLSELEYIHRHKTGKMLQYSVH----AGALIGGADARQ 205
Query: 119 HVEVKDILVQMGIYFQVQDDFLDCFGSPEVIGK-VGTDIEDYKCSWLVVKALELCNEE-- 175
E+ + +G+ FQ++DD LD G+ E IGK VG+D + K ++ + +L E+
Sbjct: 206 TRELDEFAAHLGLAFQIRDDILDIEGAEEKIGKPVGSDQSNNKATYPALLSLAGAKEKLA 265
Query: 176 ---QKKLVHENYGKVDPACVAKVKELYKTLD 203
+ H VD A +A + EL D
Sbjct: 266 FHIEAAQRHLRNADVDGAALAYICELVAARD 296
>sp|O66126|ISPA_MICLU Farnesyl diphosphate synthase OS=Micrococcus luteus GN=fps PE=3
SV=1
Length = 291
Score = 45.1 bits (105), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 83/176 (47%), Gaps = 17/176 (9%)
Query: 1 MDGSHTRRGQPCWF-RVPKVGMIAANDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVE 59
MD RRG+ R + I A D LL + IL + + L++L +
Sbjct: 88 MDNDDYRRGKLTNHKRFDEATAILAGD-ALLTDAFQCILNTQL-NAEIKLSLINLLSTAS 145
Query: 60 FQTAS--GQMIDLITTIEGE-KDLSKYSLPLHRRIVQYKTAYYSFYLPVACALLMAGENL 116
GQM+D+ +GE K L+ L RI +KT V+ ++M
Sbjct: 146 GSNGMVYGQMLDM----QGEHKTLTLNEL---ERIHIHKTGELIRAAIVSAGIIMNFN-- 196
Query: 117 DKHVEVKDILVQ-MGIYFQVQDDFLDCFGSPEVIGK-VGTDIEDYKCSWLVVKALE 170
D +E +I+ + +G+ FQ++DD LD GS E IGK VG+D+ + K +++ + LE
Sbjct: 197 DAQIEQLNIIGKNVGLMFQIKDDILDVEGSFENIGKTVGSDLNNDKSTYVSLLGLE 252
>sp|P44916|ISPB_HAEIN Octaprenyl-diphosphate synthase OS=Haemophilus influenzae (strain
ATCC 51907 / DSM 11121 / KW20 / Rd) GN=ispB PE=1 SV=1
Length = 329
Score = 42.0 bits (97), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 71/154 (46%), Gaps = 9/154 (5%)
Query: 90 RIVQYKTAYYSFYLPVACALLMAGENLDKHVEVKDILVQMGIYFQVQDDFLDCFGSPEVI 149
R++ KTA F + A ++AG + ++D +G FQ+ DD LD + + +
Sbjct: 171 RVIYSKTARL-FEVAGQAAAIVAGGTEAQEKALQDYGRYLGTAFQLVDDVLDYSANTQAL 229
Query: 150 GK-VGTDIEDYKCSWLVVKALELCNEEQKKLVHENY---GKVDPAC-VAKVKELYKTLDL 204
GK VG D+ + K + ++ A+ N +Q L+ E GK + V + +K+LD
Sbjct: 230 GKNVGDDLAEGKPTLPLLHAMRHGNAQQAALIREAIEQGGKREAIDEVLAIMTEHKSLDY 289
Query: 205 EGAFVEYEKESYEKLTKSIEAHPTKEVQAVLKSF 238
+ KE +K +IE P E + L S
Sbjct: 290 A---MNRAKEEAQKAVDAIEILPESEYKQALISL 320
>sp|P95999|GGPS_SULSO Geranylgeranyl diphosphate synthase OS=Sulfolobus solfataricus
(strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) GN=gds
PE=3 SV=2
Length = 332
Score = 41.6 bits (96), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 64/124 (51%), Gaps = 7/124 (5%)
Query: 63 ASGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYYSFYLPVACALLMAGENLDKHVEV 122
+ GQ +D+ + E D+++ + ++++ KTA F A ++ N D ++
Sbjct: 150 SEGQAMDM--SFENRLDVTEEE---YIQMIKGKTAML-FSCSAALGGIINKANDDVVKKL 203
Query: 123 KDILVQMGIYFQVQDDFLDCFGSPEVIGK-VGTDIEDYKCSWLVVKALELCNEEQKKLVH 181
+ + +GI FQ+ DD L G + +GK + +DI + K + LV+K L E++KK++
Sbjct: 204 TEYGLNLGISFQIVDDILGIIGDEKELGKPIYSDIREGKKTILVIKTLSEATEDEKKILV 263
Query: 182 ENYG 185
G
Sbjct: 264 STLG 267
>sp|P22939|ISPA_ECOLI Farnesyl diphosphate synthase OS=Escherichia coli (strain K12)
GN=ispA PE=1 SV=1
Length = 299
Score = 40.8 bits (94), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 78/188 (41%), Gaps = 25/188 (13%)
Query: 7 RRGQP-CWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQTASG 65
RRG P C + + I A D L+ IL + D P D + E +ASG
Sbjct: 95 RRGLPTCHVKFGEANAILAGDA--LQTLAFSILSDA--DMPEVSDRDRISMISELASASG 150
Query: 66 -------QMIDLITTIEGEKDLSKYSLPLH--RRIVQYKTAYYSFYLPVACALLMAGENL 116
Q +DL D +PL RI ++KT V L AG+
Sbjct: 151 IAGMCGGQALDL--------DAEGKHVPLDALERIHRHKTGAL-IRAAVRLGALSAGDKG 201
Query: 117 DKHVEVKDILVQ-MGIYFQVQDDFLDCFGSPEVIGK-VGTDIEDYKCSWLVVKALELCNE 174
+ + V D + +G+ FQVQDD LD G +GK G D + K ++ + LE +
Sbjct: 202 RRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQARK 261
Query: 175 EQKKLVHE 182
+ + L+ +
Sbjct: 262 KARDLIDD 269
>sp|P0AD58|ISPB_SHIFL Octaprenyl-diphosphate synthase OS=Shigella flexneri GN=ispB PE=3
SV=1
Length = 323
Score = 39.3 bits (90), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 67/131 (51%), Gaps = 7/131 (5%)
Query: 51 LLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYYSFYLPVACALL 110
+L++ +E A G+++ L+ + D+++ + + R++ KTA F C+ +
Sbjct: 131 VLEVMSEAVNVIAEGEVLQLMNV--NDPDITEEN---YMRVIYSKTARL-FEAAAQCSGI 184
Query: 111 MAGENLDKHVEVKDILVQMGIYFQVQDDFLDCFGSPEVIGK-VGTDIEDYKCSWLVVKAL 169
+AG ++ ++D +G FQ+ DD LD E +GK VG D+ + K + ++ A+
Sbjct: 185 LAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLGKNVGDDLNEGKPTLPLLHAM 244
Query: 170 ELCNEEQKKLV 180
EQ +++
Sbjct: 245 HHGTPEQAQMI 255
>sp|P0AD57|ISPB_ECOLI Octaprenyl-diphosphate synthase OS=Escherichia coli (strain K12)
GN=ispB PE=1 SV=1
Length = 323
Score = 39.3 bits (90), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 67/131 (51%), Gaps = 7/131 (5%)
Query: 51 LLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYYSFYLPVACALL 110
+L++ +E A G+++ L+ + D+++ + + R++ KTA F C+ +
Sbjct: 131 VLEVMSEAVNVIAEGEVLQLMNV--NDPDITEEN---YMRVIYSKTARL-FEAAAQCSGI 184
Query: 111 MAGENLDKHVEVKDILVQMGIYFQVQDDFLDCFGSPEVIGK-VGTDIEDYKCSWLVVKAL 169
+AG ++ ++D +G FQ+ DD LD E +GK VG D+ + K + ++ A+
Sbjct: 185 LAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLGKNVGDDLNEGKPTLPLLHAM 244
Query: 170 ELCNEEQKKLV 180
EQ +++
Sbjct: 245 HHGTPEQAQMI 255
>sp|O04046|GGPP2_ARATH Heterodimeric geranylgeranyl pyrophosphate synthase large subunit 2
OS=Arabidopsis thaliana GN=GGPPS2 PE=1 SV=2
Length = 376
Score = 38.1 bits (87), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 80/185 (43%), Gaps = 8/185 (4%)
Query: 1 MDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEF 60
MD RRG+P +V G+ + G LL + + + +L +
Sbjct: 169 MDNDDLRRGKPTTHKVYGEGVAILSGGALLSLAFEHMTTAEISSERMVWAVRELARSIGT 228
Query: 61 QT-ASGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYYSFYLPVACALLMAGENLDKH 119
+ +GQ +D+ + EG DL++ L I +KTA V A++ G D+
Sbjct: 229 RGLVAGQAMDISS--EG-LDLNEVGLEHLEFIHVHKTAVLLETAAVLGAIIGGGS--DEE 283
Query: 120 VE-VKDILVQMGIYFQVQDDFLDCFGSPEVIGKV-GTDIEDYKCSWLVVKALELCNEEQK 177
+E V+ +G+ FQV DD LD S E +GK G D K ++ + LE E K
Sbjct: 284 IESVRKFARCIGLLFQVVDDILDETKSSEELGKTAGKDQLAGKLTYPKLIGLEKSKEFVK 343
Query: 178 KLVHE 182
+L +
Sbjct: 344 RLTKD 348
>sp|P57537|ISPA_BUCAI Farnesyl diphosphate synthase OS=Buchnera aphidicola subsp.
Acyrthosiphon pisum (strain APS) GN=ispA PE=3 SV=1
Length = 282
Score = 37.0 bits (84), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 70/151 (46%), Gaps = 22/151 (14%)
Query: 1 MDGSHTRRGQ-PCWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVE 59
MD + RRG+ C + + + A D L++ IL N F + + + +E+
Sbjct: 89 MDNDNFRRGKISCHVKYGESTSLLAGDA--LQSLAFNILSNSFMPNVSNLKRIKMISELS 146
Query: 60 FQTAS-----GQMIDLITTIEGEK-DLSKYSLPLHRRIVQYKTAYYSFYLPVACALL-MA 112
+ S GQ +DL E EK D++ L + I YKT SF + A L+ +
Sbjct: 147 YSIGSSGMCMGQNLDL----EAEKKDVNLSELEI---INLYKT---SFLMRSAVRLVYFS 196
Query: 113 GENLDKHV-EVKDIL-VQMGIYFQVQDDFLD 141
N K + + D+ + +G+ FQ+QDD LD
Sbjct: 197 SNNFSKSILSILDLFSISIGLAFQIQDDILD 227
>sp|Q8K9A0|ISPA_BUCAP Farnesyl diphosphate synthase OS=Buchnera aphidicola subsp.
Schizaphis graminum (strain Sg) GN=ispA PE=3 SV=1
Length = 294
Score = 37.0 bits (84), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 67/154 (43%), Gaps = 28/154 (18%)
Query: 1 MDGSHTRRGQ-PCWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVE 59
+D + RRG+ C + + + A D L+ IL N + P D + L E
Sbjct: 89 IDNDYFRRGKISCHIKYGENFALLAGDA--LQGLAFNILSNS--NMPGVHDSIRLKMIAE 144
Query: 60 FQTASG-------QMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYYSFYLPVACALLMA 112
F A G QM+DL EK+ K ++ +I YKTA+ + C++ +A
Sbjct: 145 FSNAIGYSGMCIGQMLDL------EKERKKINISELEKINLYKTAFL-----IRCSIRLA 193
Query: 113 ---GENLDKHVE--VKDILVQMGIYFQVQDDFLD 141
N K V + V +G+ FQ+QDD LD
Sbjct: 194 YFASNNFSKEVLFILDKFSVSIGLAFQIQDDILD 227
>sp|Q8PW34|GGPP_METMA Geranylgeranyl diphosphate synthase OS=Methanosarcina mazei (strain
ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM
88) GN=MM_1767 PE=3 SV=1
Length = 324
Score = 36.6 bits (83), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 129 MGIYFQVQDDFLDCFGSPEVIGKV-GTDIEDYKCSWLVVKALE 170
+GI FQ+ DD LD EV+GKV G+D+ + K + +V+ A E
Sbjct: 209 IGIGFQMYDDVLDMTAPEEVLGKVRGSDLMEGKYTLIVINAFE 251
>sp|Q9ZU77|GGPP7_ARATH Geranylgeranyl pyrophosphate synthase 7, chloroplastic
OS=Arabidopsis thaliana GN=At2g18620 PE=2 SV=1
Length = 347
Score = 36.2 bits (82), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 7/137 (5%)
Query: 64 SGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYYSFYLPVACALLMAGENLDKHVE-V 122
+GQ++DL + G D + L + I +KTA V A++ G D+ VE +
Sbjct: 204 AGQVVDLTS---GGMDQNDVGLEVLEFIHVHKTAVLLEAATVLGAIVGGGS--DEEVEKL 258
Query: 123 KDILVQMGIYFQVQDDFLDCFGSPEVIGKV-GTDIEDYKCSWLVVKALELCNEEQKKLVH 181
+ +G+ FQV DD LD S E +GK G D+ K ++ + LE + KL+
Sbjct: 259 RRFARCIGLLFQVVDDILDVTKSSEELGKTAGKDLIADKLTYPKLMGLEKSKDFADKLLS 318
Query: 182 ENYGKVDPACVAKVKEL 198
+ + ++ ++VK L
Sbjct: 319 DAHEQLHGFDSSRVKPL 335
>sp|P45204|ISPA_HAEIN Farnesyl diphosphate synthase OS=Haemophilus influenzae (strain
ATCC 51907 / DSM 11121 / KW20 / Rd) GN=ispA PE=3 SV=1
Length = 295
Score = 35.8 bits (81), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 75/183 (40%), Gaps = 16/183 (8%)
Query: 1 MDGSHTRRGQP-CWFRVPKVGMIAANDGVLLRNHISRILKN----HFRDKPYYVDLLDLF 55
MD + RRG P C + + I A D L++ IL K + +L
Sbjct: 90 MDDDNLRRGHPTCHIQFDEATAILAGDA--LQSFAFEILTKTPNISTEQKLALIQILAQG 147
Query: 56 NEVEFQTASGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYYSFYLPVACALLMAGEN 115
V+ GQ +DLI+ K +S L L R + L C+ +
Sbjct: 148 AGVQ-GMCLGQSLDLISE---HKQISLSELELIHRNKTGALLIAALKLGFICSPHFTDKR 203
Query: 116 LDKHVEVKDILVQMGIYFQVQDDFLDCFGSPEVIGK-VGTDIEDYKCSWLVVKALELCNE 174
L++ + +G+ FQVQDD LD G IGK VG D++ K ++ K L L
Sbjct: 204 LEQ--SLTQYAEAIGLAFQVQDDILDIEGDSAEIGKQVGADLDLDKSTY--PKLLGLSGA 259
Query: 175 EQK 177
+QK
Sbjct: 260 KQK 262
>sp|Q94ID7|GGPPS_HEVBR Geranylgeranyl pyrophosphate synthase, chloroplastic OS=Hevea
brasiliensis GN=GGPS PE=1 SV=1
Length = 370
Score = 35.4 bits (80), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 59/131 (45%), Gaps = 12/131 (9%)
Query: 64 SGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYYSFYLPVACALLMAGENLDKHVE-V 122
+GQ++D+ + E DL K I +KTA V A+L G D+ VE +
Sbjct: 229 AGQVVDINSEGSSEVDLEKLEF-----IHIHKTAKLLEGAVVLGAIL--GGGTDEEVEKL 281
Query: 123 KDILVQMGIYFQVQDDFLDCFGSPEVIGKV-GTDIEDYKCSWLVVKALELCNEEQKKL-- 179
+ +G+ FQV DD LD S + +GK G D+ K ++ + +E E +KL
Sbjct: 282 RKYARDIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVTYPKLLGIEKSREFAEKLNK 341
Query: 180 -VHENYGKVDP 189
E DP
Sbjct: 342 EAQEQLAGFDP 352
>sp|P55785|HEPS2_GEOSE Heptaprenyl diphosphate synthase component 2 OS=Geobacillus
stearothermophilus GN=hepT PE=3 SV=1
Length = 320
Score = 35.4 bits (80), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 50/118 (42%), Gaps = 3/118 (2%)
Query: 129 MGIYFQVQDDFLDCFGSPEVIGK-VGTDIEDYKCSWLVVKALELCNEEQKKLVHENYGKV 187
+G+ FQ+ DD LD G+ E +GK G+D+ + V+ A L +E K + +
Sbjct: 203 VGMSFQITDDILDFTGTEEQLGKPAGSDLLQGNVTLPVLYA--LSDERVKAAIAAVGPET 260
Query: 188 DPACVAKVKELYKTLDLEGAFVEYEKESYEKLTKSIEAHPTKEVQAVLKSFLAKIYKR 245
D A +A V K D +K ++ P E + +L+ I KR
Sbjct: 261 DVAEMAAVISAIKRTDAIERSYALSDRYLDKALHLLDGLPMNEARGLLRDLALYIGKR 318
>sp|O24743|SDSA_RHOCA All-trans-nonaprenyl-diphosphate synthase (geranyl-diphosphate
specific) OS=Rhodobacter capsulatus GN=sdsA PE=1 SV=1
Length = 325
Score = 35.0 bits (79), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 29/140 (20%), Positives = 68/140 (48%), Gaps = 6/140 (4%)
Query: 87 LHRRIVQYKTAYYSFYLPVACALLMAGENLDKHVEVKDILVQMGIYFQVQDDFLDCFGSP 146
++ +I+ KT+ F L A ++AG+ + ++ G FQ+ DD LD
Sbjct: 166 IYLQIIHGKTSRL-FELATEGAAILAGKP-EYREPLRRFAGHFGNAFQIIDDILDYTSDA 223
Query: 147 EVIGK-VGTDIEDYKCSWLVVKALELCNEEQKKLVHENYGKVDPACVAKVKELYKTLDLE 205
+ +GK +G D+ + K + ++ A++ EQ+ L+ + + ++++++ +
Sbjct: 224 DTLGKNIGDDLMEGKPTLPLIAAMQNTQGEQRDLIRRS---IATGGTSQLEQVIAIVQNS 280
Query: 206 GAFVEYEKESYEKLTKSIEA 225
GA K + E+ ++++A
Sbjct: 281 GALDYCHKRATEETERALQA 300
>sp|Q9UWR6|GFPS_AERPX Geranylfarnesyl diphosphate synthase OS=Aeropyrum pernix GN=fgs
PE=1 SV=1
Length = 318
Score = 35.0 bits (79), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 127 VQMGIYFQVQDDFLDCFGSPEVIGK-VGTDIEDYKCSWLVVKALELCNEEQ 176
+ GI FQ++DD L G P+V GK V D+ K + LV+ A++ +
Sbjct: 197 MNAGIAFQIRDDILGVIGDPKVTGKPVYNDLRRGKKTLLVIYAVKKAGRRE 247
>sp|Q9LRR0|GGPP8_ARATH Putative geranylgeranyl pyrophosphate synthase 8, chloroplastic
OS=Arabidopsis thaliana GN=At3g14510 PE=5 SV=2
Length = 361
Score = 34.7 bits (78), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 58/127 (45%), Gaps = 19/127 (14%)
Query: 64 SGQMIDLITTIEGEKDLSKYSLPLHRR--IVQYKTAYYSFYLPVACALLMAG-----ENL 116
+GQ++DL + + L+ + + L R I +KTA V A++ G E L
Sbjct: 218 AGQVVDLSS-----ERLNPHDVGLERLEFIHLHKTAALLEAAAVIGAIMGGGTEEEIEKL 272
Query: 117 DKHVEVKDILVQMGIYFQVQDDFLDCFGSPEVIGKV-GTDIEDYKCSWLVVKALELCNEE 175
K+ +G+ FQV DD LD S E +GK G D+ K ++ + LE E
Sbjct: 273 RKYARC------IGLLFQVVDDILDVTKSTEELGKTAGKDVMAGKLTYPRLIGLERSREV 326
Query: 176 QKKLVHE 182
+KL E
Sbjct: 327 AEKLSRE 333
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.138 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 93,813,768
Number of Sequences: 539616
Number of extensions: 4038265
Number of successful extensions: 11371
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 82
Number of HSP's that attempted gapping in prelim test: 11294
Number of HSP's gapped (non-prelim): 119
length of query: 247
length of database: 191,569,459
effective HSP length: 114
effective length of query: 133
effective length of database: 130,053,235
effective search space: 17297080255
effective search space used: 17297080255
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)