Query 025824
Match_columns 247
No_of_seqs 253 out of 2984
Neff 8.9
Searched_HMMs 29240
Date Mon Mar 25 18:23:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025824.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025824hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1sui_A Caffeoyl-COA O-methyltr 100.0 2.8E-41 9.6E-46 282.3 25.5 247 1-247 1-247 (247)
2 3c3y_A Pfomt, O-methyltransfer 100.0 7.4E-40 2.5E-44 272.0 25.0 234 13-247 4-237 (237)
3 3r3h_A O-methyltransferase, SA 100.0 2.8E-39 9.6E-44 269.4 22.3 221 18-247 1-221 (242)
4 3dr5_A Putative O-methyltransf 100.0 5.9E-38 2E-42 258.0 23.0 205 26-246 5-213 (221)
5 3cbg_A O-methyltransferase; cy 100.0 1.7E-36 5.6E-41 251.0 24.3 223 15-246 10-232 (232)
6 3tr6_A O-methyltransferase; ce 100.0 9.1E-36 3.1E-40 244.6 26.1 221 17-246 3-224 (225)
7 3duw_A OMT, O-methyltransferas 100.0 2.2E-34 7.4E-39 236.2 27.0 213 25-247 6-223 (223)
8 2avd_A Catechol-O-methyltransf 100.0 9.4E-34 3.2E-38 233.1 25.5 213 25-246 17-229 (229)
9 3tfw_A Putative O-methyltransf 100.0 1.2E-33 4.1E-38 236.1 26.4 210 26-247 12-226 (248)
10 3ntv_A MW1564 protein; rossman 100.0 3.8E-34 1.3E-38 236.8 22.2 214 21-246 17-231 (232)
11 2hnk_A SAM-dependent O-methylt 100.0 1.8E-32 6.2E-37 227.4 26.1 219 20-246 3-231 (239)
12 3c3p_A Methyltransferase; NP_9 100.0 2.4E-32 8.2E-37 222.2 20.3 204 25-246 6-209 (210)
13 3u81_A Catechol O-methyltransf 100.0 1.5E-30 5E-35 213.4 22.2 199 26-246 6-213 (221)
14 2gpy_A O-methyltransferase; st 100.0 1.5E-29 5.2E-34 208.8 20.8 211 25-246 4-214 (233)
15 3cvo_A Methyltransferase-like 99.9 1.6E-21 5.5E-26 156.8 15.3 132 56-195 9-159 (202)
16 2wk1_A NOVP; transferase, O-me 99.8 2.5E-20 8.5E-25 157.3 12.1 160 63-246 86-281 (282)
17 2bm8_A Cephalosporin hydroxyla 99.7 9.9E-18 3.4E-22 138.6 11.6 116 65-191 67-188 (236)
18 2o07_A Spermidine synthase; st 99.7 8.9E-18 3E-22 143.9 10.8 148 78-246 94-256 (304)
19 2b2c_A Spermidine synthase; be 99.7 1.4E-17 4.7E-22 143.2 11.1 150 77-246 106-269 (314)
20 3fpf_A Mtnas, putative unchara 99.7 1.2E-16 4.2E-21 135.3 13.3 106 74-191 117-223 (298)
21 3e05_A Precorrin-6Y C5,15-meth 99.7 2.5E-16 8.6E-21 126.7 14.1 119 64-191 25-143 (204)
22 3jwg_A HEN1, methyltransferase 99.7 4.2E-16 1.4E-20 126.6 15.3 168 64-239 14-194 (219)
23 3p9n_A Possible methyltransfer 99.7 4.8E-16 1.7E-20 123.6 15.0 106 78-191 43-154 (189)
24 3jwh_A HEN1; methyltransferase 99.7 5.5E-16 1.9E-20 125.8 14.2 167 65-239 15-194 (217)
25 4gek_A TRNA (CMO5U34)-methyltr 99.7 5.3E-16 1.8E-20 130.0 14.3 116 68-192 57-180 (261)
26 3njr_A Precorrin-6Y methylase; 99.7 9.7E-16 3.3E-20 123.7 15.0 115 65-191 41-155 (204)
27 3hm2_A Precorrin-6Y C5,15-meth 99.7 4.9E-16 1.7E-20 121.8 12.4 109 74-191 20-128 (178)
28 1uir_A Polyamine aminopropyltr 99.7 4.2E-16 1.4E-20 134.0 12.6 151 77-246 75-242 (314)
29 2esr_A Methyltransferase; stru 99.7 3.1E-16 1.1E-20 123.2 10.5 107 77-191 29-139 (177)
30 1mjf_A Spermidine synthase; sp 99.7 6.4E-16 2.2E-20 130.9 13.0 147 77-246 73-239 (281)
31 1xj5_A Spermidine synthase 1; 99.7 4.8E-16 1.7E-20 134.6 12.1 111 78-194 119-240 (334)
32 3orh_A Guanidinoacetate N-meth 99.6 1.2E-16 4.1E-21 131.9 6.6 112 78-198 59-178 (236)
33 1xdz_A Methyltransferase GIDB; 99.6 2.2E-15 7.6E-20 124.4 13.6 105 78-189 69-173 (240)
34 3m6w_A RRNA methylase; rRNA me 99.6 1.8E-15 6E-20 136.1 13.7 120 63-190 85-229 (464)
35 1nkv_A Hypothetical protein YJ 99.6 3.1E-15 1.1E-19 124.1 14.0 120 65-194 22-144 (256)
36 2ift_A Putative methylase HI07 99.6 1.6E-15 5.6E-20 122.1 11.6 115 70-191 44-164 (201)
37 2fhp_A Methylase, putative; al 99.6 2.6E-15 8.7E-20 118.6 11.9 108 78-190 43-154 (187)
38 3mb5_A SAM-dependent methyltra 99.6 2.3E-15 7.9E-20 125.1 12.1 116 64-189 78-193 (255)
39 3m4x_A NOL1/NOP2/SUN family pr 99.6 2.3E-15 8E-20 135.1 12.8 121 63-190 89-234 (456)
40 3dlc_A Putative S-adenosyl-L-m 99.6 5E-15 1.7E-19 119.5 13.6 105 80-193 44-151 (219)
41 1iy9_A Spermidine synthase; ro 99.6 2.6E-15 8.9E-20 126.8 12.2 105 78-189 74-188 (275)
42 3kkz_A Uncharacterized protein 99.6 2.7E-15 9.4E-20 125.5 11.9 109 77-194 44-154 (267)
43 3eey_A Putative rRNA methylase 99.6 2.1E-15 7.2E-20 120.4 10.6 107 78-190 21-139 (197)
44 3mti_A RRNA methylase; SAM-dep 99.6 1.6E-15 5.4E-20 120.0 9.6 102 78-189 21-134 (185)
45 3f4k_A Putative methyltransfer 99.6 3.1E-15 1.1E-19 124.2 11.8 110 76-194 43-154 (257)
46 1l3i_A Precorrin-6Y methyltran 99.6 8.5E-15 2.9E-19 115.6 13.4 117 64-190 18-134 (192)
47 3lpm_A Putative methyltransfer 99.6 2.6E-15 8.9E-20 125.4 10.6 115 67-188 36-174 (259)
48 2fpo_A Methylase YHHF; structu 99.6 4.2E-15 1.5E-19 119.7 11.2 105 78-191 53-161 (202)
49 3adn_A Spermidine synthase; am 99.6 3.9E-15 1.3E-19 126.8 11.5 106 77-189 81-197 (294)
50 1yzh_A TRNA (guanine-N(7)-)-me 99.6 8.2E-15 2.8E-19 118.8 12.7 105 78-189 40-155 (214)
51 3dxy_A TRNA (guanine-N(7)-)-me 99.6 3.8E-15 1.3E-19 121.6 10.5 105 79-189 34-149 (218)
52 2ozv_A Hypothetical protein AT 99.6 2.3E-15 8E-20 126.0 9.4 121 67-188 24-168 (260)
53 3ajd_A Putative methyltransfer 99.6 1.1E-14 3.8E-19 122.8 13.6 123 65-191 69-212 (274)
54 1inl_A Spermidine synthase; be 99.6 8.8E-15 3E-19 124.8 12.7 106 77-189 88-204 (296)
55 3g89_A Ribosomal RNA small sub 99.6 4.5E-15 1.5E-19 123.5 10.4 103 79-188 80-182 (249)
56 1sqg_A SUN protein, FMU protei 99.6 3.6E-14 1.2E-18 126.9 17.1 121 63-191 230-375 (429)
57 1jsx_A Glucose-inhibited divis 99.6 2E-14 7E-19 115.5 14.0 100 79-189 65-164 (207)
58 3lbf_A Protein-L-isoaspartate 99.6 7.7E-15 2.6E-19 118.3 11.4 112 64-189 62-173 (210)
59 3gjy_A Spermidine synthase; AP 99.6 5.2E-15 1.8E-19 126.7 10.9 106 78-190 86-200 (317)
60 2fca_A TRNA (guanine-N(7)-)-me 99.6 1.2E-14 4.1E-19 118.0 12.3 105 78-189 37-152 (213)
61 3kr9_A SAM-dependent methyltra 99.6 6.8E-15 2.3E-19 120.2 10.6 111 71-189 6-118 (225)
62 3hem_A Cyclopropane-fatty-acyl 99.6 1.7E-14 5.9E-19 122.9 13.4 114 68-193 58-186 (302)
63 2yxl_A PH0851 protein, 450AA l 99.6 2E-14 7E-19 129.3 14.6 123 63-191 243-390 (450)
64 2frx_A Hypothetical protein YE 99.6 3.1E-14 1E-18 128.9 15.7 122 63-191 99-247 (479)
65 1dus_A MJ0882; hypothetical pr 99.6 2.6E-14 9E-19 112.9 13.5 110 70-190 43-157 (194)
66 2b3t_A Protein methyltransfera 99.6 2E-14 6.9E-19 121.1 13.4 116 64-189 92-237 (276)
67 1ws6_A Methyltransferase; stru 99.6 2.4E-14 8.2E-19 111.3 12.8 104 79-190 41-147 (171)
68 3grz_A L11 mtase, ribosomal pr 99.6 5.1E-14 1.8E-18 113.1 15.1 112 68-191 48-160 (205)
69 1ixk_A Methyltransferase; open 99.6 1.8E-14 6.3E-19 123.8 12.5 121 63-191 102-247 (315)
70 1nv8_A HEMK protein; class I a 99.6 6.1E-14 2.1E-18 118.9 15.3 115 64-189 105-248 (284)
71 3sso_A Methyltransferase; macr 99.6 1.3E-13 4.4E-18 120.9 17.6 151 78-247 215-393 (419)
72 3dh0_A SAM dependent methyltra 99.6 6.4E-14 2.2E-18 113.4 14.5 113 74-194 32-147 (219)
73 2yxd_A Probable cobalt-precorr 99.6 8.2E-14 2.8E-18 109.2 14.5 112 64-190 20-131 (183)
74 2pt6_A Spermidine synthase; tr 99.6 1.6E-14 5.6E-19 124.4 11.2 106 77-189 114-229 (321)
75 3gu3_A Methyltransferase; alph 99.6 1.5E-14 5.2E-19 122.3 10.2 108 76-193 19-129 (284)
76 2b25_A Hypothetical protein; s 99.5 4.3E-14 1.5E-18 122.4 13.2 120 63-189 89-218 (336)
77 4dzr_A Protein-(glutamine-N5) 99.5 5.5E-15 1.9E-19 118.9 7.0 119 64-188 11-163 (215)
78 4htf_A S-adenosylmethionine-de 99.5 4.9E-14 1.7E-18 119.0 13.1 104 79-191 68-174 (285)
79 3g07_A 7SK snRNA methylphospha 99.5 1.6E-14 5.3E-19 122.9 10.0 114 78-194 45-224 (292)
80 2pbf_A Protein-L-isoaspartate 99.5 3.4E-14 1.2E-18 115.9 11.7 120 64-189 63-192 (227)
81 1o54_A SAM-dependent O-methylt 99.5 2E-14 6.9E-19 121.1 10.6 116 65-190 98-213 (277)
82 2igt_A SAM dependent methyltra 99.5 7.6E-14 2.6E-18 120.8 14.2 116 71-192 144-274 (332)
83 3mgg_A Methyltransferase; NYSG 99.5 5.4E-14 1.8E-18 118.0 13.0 115 78-201 36-153 (276)
84 3bus_A REBM, methyltransferase 99.5 4.4E-14 1.5E-18 118.3 12.3 119 67-194 46-170 (273)
85 3evz_A Methyltransferase; NYSG 99.5 3.2E-14 1.1E-18 116.2 11.1 102 77-188 53-177 (230)
86 3lec_A NADB-rossmann superfami 99.5 2.7E-14 9.2E-19 116.9 10.5 111 71-189 12-124 (230)
87 3ocj_A Putative exported prote 99.5 7.4E-15 2.5E-19 125.5 7.4 109 77-193 116-230 (305)
88 3a27_A TYW2, uncharacterized p 99.5 2.1E-14 7.2E-19 121.0 10.0 116 65-191 105-220 (272)
89 3g5t_A Trans-aconitate 3-methy 99.5 7.7E-14 2.6E-18 118.7 13.7 110 78-188 35-147 (299)
90 2yxe_A Protein-L-isoaspartate 99.5 3.7E-14 1.3E-18 114.7 11.1 115 64-189 62-176 (215)
91 3ckk_A TRNA (guanine-N(7)-)-me 99.5 3.7E-14 1.3E-18 117.0 11.1 105 78-188 45-166 (235)
92 2frn_A Hypothetical protein PH 99.5 2.3E-14 8E-19 121.1 10.0 104 78-192 124-227 (278)
93 1zx0_A Guanidinoacetate N-meth 99.5 2.2E-14 7.7E-19 117.9 9.6 116 68-192 47-172 (236)
94 1dl5_A Protein-L-isoaspartate 99.5 3.5E-14 1.2E-18 122.1 11.1 114 65-189 61-174 (317)
95 1pjz_A Thiopurine S-methyltran 99.5 3.6E-14 1.2E-18 114.3 10.4 115 63-187 7-137 (203)
96 2pwy_A TRNA (adenine-N(1)-)-me 99.5 8E-14 2.7E-18 115.7 12.7 114 65-189 82-197 (258)
97 3gnl_A Uncharacterized protein 99.5 4.1E-14 1.4E-18 116.8 10.4 111 71-189 12-124 (244)
98 2o57_A Putative sarcosine dime 99.5 5.9E-14 2E-18 119.1 11.7 110 76-194 79-191 (297)
99 1u2z_A Histone-lysine N-methyl 99.5 1.7E-13 5.8E-18 122.1 15.0 115 74-195 237-364 (433)
100 1xxl_A YCGJ protein; structura 99.5 1.2E-13 4.1E-18 113.8 12.5 115 67-192 9-126 (239)
101 2nxc_A L11 mtase, ribosomal pr 99.5 7.2E-13 2.5E-17 110.4 17.3 111 69-192 109-220 (254)
102 1vl5_A Unknown conserved prote 99.5 8.6E-14 3E-18 115.8 11.7 107 74-191 32-141 (260)
103 3dtn_A Putative methyltransfer 99.5 3.2E-14 1.1E-18 116.5 8.8 104 78-193 43-151 (234)
104 1i1n_A Protein-L-isoaspartate 99.5 8.3E-14 2.8E-18 113.6 11.2 103 77-189 75-181 (226)
105 1i9g_A Hypothetical protein RV 99.5 8E-14 2.7E-18 117.3 11.4 118 63-189 83-202 (280)
106 2fk8_A Methoxy mycolic acid sy 99.5 1.1E-13 3.8E-18 118.6 12.4 114 68-193 76-197 (318)
107 3gdh_A Trimethylguanosine synt 99.5 6.6E-15 2.2E-19 121.3 4.4 112 68-190 67-181 (241)
108 2gb4_A Thiopurine S-methyltran 99.5 1.1E-13 3.6E-18 115.4 11.8 124 57-189 46-190 (252)
109 2vdv_E TRNA (guanine-N(7)-)-me 99.5 8.4E-14 2.9E-18 115.3 11.1 104 79-188 49-171 (246)
110 3htx_A HEN1; HEN1, small RNA m 99.5 8.7E-13 3E-17 124.2 19.0 160 71-239 713-900 (950)
111 4dcm_A Ribosomal RNA large sub 99.5 5.2E-14 1.8E-18 123.8 10.2 102 78-188 221-332 (375)
112 1kpg_A CFA synthase;, cyclopro 99.5 1.5E-13 5.1E-18 116.0 12.5 115 67-193 49-171 (287)
113 2yvl_A TRMI protein, hypotheti 99.5 1.4E-13 4.8E-18 113.5 12.0 114 64-189 76-189 (248)
114 3c0k_A UPF0064 protein YCCW; P 99.5 2.2E-13 7.4E-18 120.7 13.8 110 76-190 217-339 (396)
115 2b78_A Hypothetical protein SM 99.5 2.3E-13 7.9E-18 120.1 13.9 108 78-190 211-331 (385)
116 1jg1_A PIMT;, protein-L-isoasp 99.5 1E-13 3.4E-18 114.0 10.8 113 64-189 76-188 (235)
117 3vc1_A Geranyl diphosphate 2-C 99.5 7.1E-14 2.4E-18 119.7 10.1 108 78-194 116-225 (312)
118 1g8a_A Fibrillarin-like PRE-rR 99.5 7.3E-14 2.5E-18 114.0 9.7 103 78-189 72-177 (227)
119 1yb2_A Hypothetical protein TA 99.5 3.3E-14 1.1E-18 119.8 7.7 112 68-190 99-211 (275)
120 4df3_A Fibrillarin-like rRNA/T 99.5 7E-14 2.4E-18 114.8 9.4 106 77-189 75-181 (233)
121 2xvm_A Tellurite resistance pr 99.5 3.2E-13 1.1E-17 107.4 13.1 105 74-190 27-136 (199)
122 3lcc_A Putative methyl chlorid 99.5 8.8E-14 3E-18 114.1 9.9 102 79-191 66-172 (235)
123 1nt2_A Fibrillarin-like PRE-rR 99.5 1.3E-13 4.6E-18 111.7 10.8 104 78-189 56-160 (210)
124 3fzg_A 16S rRNA methylase; met 99.5 9E-13 3.1E-17 104.3 15.1 159 65-246 34-197 (200)
125 3m70_A Tellurite resistance pr 99.5 4.4E-13 1.5E-17 113.1 14.3 102 76-190 117-223 (286)
126 2as0_A Hypothetical protein PH 99.5 1.5E-13 5.1E-18 121.7 11.7 106 79-189 217-334 (396)
127 2i7c_A Spermidine synthase; tr 99.5 6.1E-14 2.1E-18 118.8 8.8 106 77-189 76-191 (283)
128 3k6r_A Putative transferase PH 99.5 9.9E-14 3.4E-18 116.9 10.0 103 78-191 124-226 (278)
129 3ofk_A Nodulation protein S; N 99.5 6.2E-14 2.1E-18 113.3 8.4 108 69-190 41-154 (216)
130 3tma_A Methyltransferase; thum 99.5 3.2E-13 1.1E-17 117.7 13.2 116 65-188 189-315 (354)
131 3bwc_A Spermidine synthase; SA 99.5 9.1E-14 3.1E-18 118.9 9.3 106 78-189 94-209 (304)
132 2ex4_A Adrenal gland protein A 99.5 5.9E-14 2E-18 115.6 7.7 116 67-192 63-187 (241)
133 2p7i_A Hypothetical protein; p 99.5 1.2E-13 4E-18 113.5 9.3 107 68-190 31-141 (250)
134 3uwp_A Histone-lysine N-methyl 99.5 5.7E-13 1.9E-17 117.2 14.0 114 76-195 170-293 (438)
135 3bkx_A SAM-dependent methyltra 99.5 5E-13 1.7E-17 111.9 13.2 112 76-193 40-162 (275)
136 1wzn_A SAM-dependent methyltra 99.5 4.2E-13 1.4E-17 111.0 12.5 109 68-189 27-144 (252)
137 3tos_A CALS11; methyltransfera 99.5 5.9E-13 2E-17 110.5 13.1 194 22-244 19-254 (257)
138 1wxx_A TT1595, hypothetical pr 99.5 1.9E-13 6.5E-18 120.5 10.7 105 79-190 209-325 (382)
139 3v97_A Ribosomal RNA large sub 99.5 3.3E-13 1.1E-17 127.4 13.0 112 73-192 533-659 (703)
140 4dmg_A Putative uncharacterize 99.5 2.3E-13 7.9E-18 120.3 11.2 99 80-189 215-325 (393)
141 2b9e_A NOL1/NOP2/SUN domain fa 99.5 6.6E-13 2.2E-17 113.7 13.7 98 63-165 86-183 (309)
142 1fbn_A MJ fibrillarin homologu 99.5 2.2E-13 7.5E-18 111.6 10.2 104 78-189 73-177 (230)
143 4fsd_A Arsenic methyltransfera 99.5 1.9E-13 6.4E-18 120.5 10.4 117 77-194 81-207 (383)
144 2cmg_A Spermidine synthase; tr 99.5 3.5E-14 1.2E-18 119.0 5.4 97 78-189 71-170 (262)
145 2qfm_A Spermine synthase; sper 99.5 4.1E-13 1.4E-17 116.4 12.1 106 79-189 188-313 (364)
146 1vbf_A 231AA long hypothetical 99.5 2.8E-13 9.6E-18 110.7 10.5 110 64-189 55-164 (231)
147 2kw5_A SLR1183 protein; struct 99.5 3.4E-13 1.2E-17 107.9 10.7 110 71-192 21-133 (202)
148 1r18_A Protein-L-isoaspartate( 99.5 1.1E-13 3.9E-18 113.0 7.8 112 68-189 72-193 (227)
149 3id6_C Fibrillarin-like rRNA/T 99.5 4.3E-13 1.5E-17 110.2 11.0 106 77-189 74-180 (232)
150 3dp7_A SAM-dependent methyltra 99.5 4.5E-13 1.5E-17 117.3 11.8 108 78-194 178-291 (363)
151 2ipx_A RRNA 2'-O-methyltransfe 99.5 3.8E-13 1.3E-17 110.3 10.7 103 78-189 76-181 (233)
152 3dmg_A Probable ribosomal RNA 99.4 5.4E-13 1.9E-17 117.5 12.2 114 64-189 213-339 (381)
153 4hg2_A Methyltransferase type 99.4 1.3E-13 4.5E-18 115.2 7.8 103 70-189 29-134 (257)
154 2p8j_A S-adenosylmethionine-de 99.4 4.5E-13 1.5E-17 107.6 10.6 117 65-192 9-130 (209)
155 3q7e_A Protein arginine N-meth 99.4 6E-13 2.1E-17 115.9 11.9 106 76-191 63-174 (349)
156 3r0q_C Probable protein argini 99.4 4.7E-13 1.6E-17 117.7 11.3 105 77-192 61-171 (376)
157 3ou2_A SAM-dependent methyltra 99.4 5.6E-13 1.9E-17 107.5 10.7 109 67-191 34-147 (218)
158 3ujc_A Phosphoethanolamine N-m 99.4 2.9E-13 9.9E-18 112.5 9.2 114 68-193 41-162 (266)
159 3thr_A Glycine N-methyltransfe 99.4 1.1E-12 3.6E-17 111.0 12.7 119 65-190 43-175 (293)
160 2dul_A N(2),N(2)-dimethylguano 99.4 6.7E-13 2.3E-17 116.7 11.6 104 78-190 46-164 (378)
161 1o9g_A RRNA methyltransferase; 99.4 1.3E-13 4.3E-18 114.4 6.6 118 69-189 38-213 (250)
162 1y8c_A S-adenosylmethionine-de 99.4 6.8E-13 2.3E-17 108.8 10.9 110 67-189 23-141 (246)
163 3hnr_A Probable methyltransfer 99.4 4.9E-13 1.7E-17 108.3 9.4 111 66-193 33-148 (220)
164 2h00_A Methyltransferase 10 do 99.4 1.6E-13 5.6E-18 113.9 6.7 98 65-165 46-149 (254)
165 1g6q_1 HnRNP arginine N-methyl 99.4 1.4E-12 4.6E-17 112.7 12.7 106 74-189 33-144 (328)
166 3gwz_A MMCR; methyltransferase 99.4 1.6E-12 5.5E-17 114.0 13.3 106 78-194 201-311 (369)
167 2fyt_A Protein arginine N-meth 99.4 1.1E-12 3.7E-17 113.9 12.0 103 77-189 62-170 (340)
168 3i53_A O-methyltransferase; CO 99.4 7.9E-13 2.7E-17 114.1 11.1 106 79-195 169-279 (332)
169 1ri5_A MRNA capping enzyme; me 99.4 1.2E-12 4E-17 110.6 11.9 105 78-190 63-174 (298)
170 2y1w_A Histone-arginine methyl 99.4 1.1E-12 3.9E-17 114.1 12.0 103 76-189 47-154 (348)
171 3mcz_A O-methyltransferase; ad 99.4 1.3E-12 4.4E-17 113.6 12.4 108 80-195 180-292 (352)
172 1ve3_A Hypothetical protein PH 99.4 1.4E-12 4.9E-17 105.8 11.8 102 79-192 38-144 (227)
173 3h2b_A SAM-dependent methyltra 99.4 1.1E-12 3.8E-17 104.9 10.8 109 66-191 29-142 (203)
174 3m33_A Uncharacterized protein 99.4 2.4E-13 8.1E-18 111.1 6.8 105 65-187 32-139 (226)
175 2yqz_A Hypothetical protein TT 99.4 1.3E-12 4.3E-17 108.5 11.0 100 78-189 38-140 (263)
176 2p35_A Trans-aconitate 2-methy 99.4 4.7E-13 1.6E-17 110.9 8.4 98 78-190 32-132 (259)
177 3pfg_A N-methyltransferase; N, 99.4 8.9E-13 3.1E-17 109.8 10.1 105 70-191 40-152 (263)
178 3axs_A Probable N(2),N(2)-dime 99.4 4E-13 1.4E-17 118.4 8.3 105 79-190 52-158 (392)
179 3d2l_A SAM-dependent methyltra 99.4 1.7E-12 5.7E-17 106.5 11.3 106 70-189 23-136 (243)
180 3g2m_A PCZA361.24; SAM-depende 99.4 4E-13 1.4E-17 114.2 7.7 103 79-192 82-192 (299)
181 3g5l_A Putative S-adenosylmeth 99.4 5.8E-13 2E-17 110.3 8.5 99 78-189 43-144 (253)
182 3dli_A Methyltransferase; PSI- 99.4 5.8E-13 2E-17 109.6 7.9 97 78-191 40-141 (240)
183 3p2e_A 16S rRNA methylase; met 99.4 6.6E-13 2.3E-17 108.7 8.2 103 78-188 23-137 (225)
184 3sm3_A SAM-dependent methyltra 99.4 1.3E-12 4.6E-17 106.4 9.9 104 78-191 29-142 (235)
185 2qe6_A Uncharacterized protein 99.4 1E-11 3.5E-16 104.6 15.5 110 79-192 77-198 (274)
186 2yx1_A Hypothetical protein MJ 99.4 2.1E-12 7.1E-17 112.0 11.5 99 78-191 194-292 (336)
187 3ccf_A Cyclopropane-fatty-acyl 99.4 1.1E-12 3.8E-17 110.3 9.4 100 74-190 52-154 (279)
188 3q87_B N6 adenine specific DNA 99.4 2.3E-12 7.9E-17 100.8 10.5 103 64-190 7-123 (170)
189 4hc4_A Protein arginine N-meth 99.4 2.1E-12 7.2E-17 113.2 11.4 104 77-191 81-190 (376)
190 3mq2_A 16S rRNA methyltransfer 99.4 1.7E-12 5.8E-17 105.1 10.1 103 77-189 25-139 (218)
191 1x19_A CRTF-related protein; m 99.4 5.3E-12 1.8E-16 110.1 13.8 106 78-194 189-299 (359)
192 1tw3_A COMT, carminomycin 4-O- 99.4 2.9E-12 9.8E-17 111.7 11.9 104 78-192 182-290 (360)
193 2qm3_A Predicted methyltransfe 99.4 1.7E-12 5.8E-17 114.1 10.4 102 79-188 172-276 (373)
194 3e23_A Uncharacterized protein 99.4 1.1E-12 3.8E-17 105.6 8.5 103 70-190 33-141 (211)
195 3e8s_A Putative SAM dependent 99.4 2.7E-12 9.2E-17 103.9 10.7 105 74-191 47-153 (227)
196 1qzz_A RDMB, aclacinomycin-10- 99.4 1.9E-12 6.4E-17 113.4 10.4 103 78-191 181-288 (374)
197 2r3s_A Uncharacterized protein 99.4 4.4E-12 1.5E-16 109.3 12.2 106 78-193 164-274 (335)
198 2ip2_A Probable phenazine-spec 99.4 2.2E-12 7.7E-17 111.3 10.3 103 81-194 169-276 (334)
199 1xtp_A LMAJ004091AAA; SGPP, st 99.4 8.4E-12 2.9E-16 103.0 13.1 102 78-191 92-198 (254)
200 3bkw_A MLL3908 protein, S-aden 99.4 1.6E-12 5.5E-17 106.6 8.6 108 70-190 34-144 (243)
201 3ggd_A SAM-dependent methyltra 99.3 6.3E-12 2.2E-16 103.5 11.7 105 78-191 55-164 (245)
202 2pjd_A Ribosomal RNA small sub 99.3 1.7E-12 5.7E-17 112.8 8.4 100 78-189 195-302 (343)
203 3b3j_A Histone-arginine methyl 99.3 3.9E-12 1.3E-16 115.2 11.0 100 78-188 157-261 (480)
204 2jjq_A Uncharacterized RNA met 99.3 1E-11 3.4E-16 110.9 13.4 115 60-189 270-386 (425)
205 3i9f_A Putative type 11 methyl 99.3 2.3E-12 8E-17 100.1 8.2 100 76-194 14-116 (170)
206 3ege_A Putative methyltransfer 99.3 1.5E-12 5.2E-17 108.5 7.5 109 65-191 20-131 (261)
207 3tm4_A TRNA (guanine N2-)-meth 99.3 7.3E-12 2.5E-16 110.0 11.9 114 64-187 203-327 (373)
208 3bzb_A Uncharacterized protein 99.3 1.2E-11 4E-16 104.5 12.8 108 78-188 78-203 (281)
209 2qy6_A UPF0209 protein YFCK; s 99.3 2.7E-12 9.2E-17 107.1 8.5 108 79-188 60-211 (257)
210 2vdw_A Vaccinia virus capping 99.3 5.6E-12 1.9E-16 107.7 10.7 110 79-191 48-170 (302)
211 1af7_A Chemotaxis receptor met 99.3 4.3E-12 1.5E-16 106.8 9.7 167 10-189 40-251 (274)
212 1ej0_A FTSJ; methyltransferase 99.3 3.5E-12 1.2E-16 98.9 8.5 100 78-190 21-136 (180)
213 3l8d_A Methyltransferase; stru 99.3 3.4E-12 1.2E-16 104.7 8.8 99 78-190 52-153 (242)
214 3bgv_A MRNA CAP guanine-N7 met 99.3 9.6E-12 3.3E-16 106.4 11.7 107 79-190 34-155 (313)
215 3bt7_A TRNA (uracil-5-)-methyl 99.3 1.1E-11 3.6E-16 108.8 12.2 120 62-188 193-324 (369)
216 1wy7_A Hypothetical protein PH 99.3 4.4E-11 1.5E-15 95.9 14.4 109 64-188 31-147 (207)
217 3cgg_A SAM-dependent methyltra 99.3 1.3E-11 4.3E-16 97.4 10.5 105 68-190 37-147 (195)
218 3iv6_A Putative Zn-dependent a 99.3 5.2E-12 1.8E-16 105.5 8.6 102 74-189 40-147 (261)
219 2i62_A Nicotinamide N-methyltr 99.3 1.2E-12 4.1E-17 108.7 4.6 110 78-192 55-200 (265)
220 3bxo_A N,N-dimethyltransferase 99.3 1E-11 3.4E-16 101.6 10.1 98 78-192 39-143 (239)
221 2gs9_A Hypothetical protein TT 99.3 3.7E-12 1.3E-16 102.5 6.9 95 79-191 36-133 (211)
222 2pxx_A Uncharacterized protein 99.3 3.9E-12 1.3E-16 102.2 6.6 101 78-190 41-159 (215)
223 1uwv_A 23S rRNA (uracil-5-)-me 99.3 3E-11 1E-15 108.2 13.0 115 67-189 271-388 (433)
224 3o4f_A Spermidine synthase; am 99.3 1.2E-11 4.1E-16 104.5 9.4 107 75-188 79-196 (294)
225 2aot_A HMT, histamine N-methyl 99.3 2E-11 6.9E-16 103.4 10.8 108 79-189 52-171 (292)
226 2avn_A Ubiquinone/menaquinone 99.3 1.6E-11 5.6E-16 102.2 9.5 94 79-189 54-151 (260)
227 1p91_A Ribosomal RNA large sub 99.3 5.6E-11 1.9E-15 99.2 12.7 105 67-189 71-177 (269)
228 1ne2_A Hypothetical protein TA 99.3 5.8E-11 2E-15 94.8 12.0 91 79-189 51-146 (200)
229 1zq9_A Probable dimethyladenos 99.2 5.5E-11 1.9E-15 100.7 11.5 93 64-168 13-105 (285)
230 3giw_A Protein of unknown func 99.2 7.4E-11 2.5E-15 98.8 11.9 166 20-192 18-202 (277)
231 2plw_A Ribosomal RNA methyltra 99.2 4.7E-11 1.6E-15 95.2 10.1 99 78-189 21-153 (201)
232 4fzv_A Putative methyltransfer 99.2 1E-10 3.6E-15 101.8 12.9 126 66-203 135-292 (359)
233 2g72_A Phenylethanolamine N-me 99.2 2.6E-11 9E-16 102.4 8.3 110 79-191 71-216 (289)
234 2f8l_A Hypothetical protein LM 99.2 4.2E-11 1.4E-15 104.0 9.5 116 63-188 110-254 (344)
235 2a14_A Indolethylamine N-methy 99.2 9E-12 3.1E-16 104.1 4.6 110 78-192 54-199 (263)
236 1vlm_A SAM-dependent methyltra 99.2 4.5E-11 1.5E-15 96.9 8.5 100 70-191 38-140 (219)
237 3dou_A Ribosomal RNA large sub 99.2 8.4E-11 2.9E-15 93.7 9.8 97 78-189 24-138 (191)
238 3lst_A CALO1 methyltransferase 99.2 1.4E-10 4.7E-15 100.8 11.9 104 78-195 183-291 (348)
239 3cc8_A Putative methyltransfer 99.2 3.1E-11 1E-15 97.8 7.0 97 78-190 31-130 (230)
240 2h1r_A Dimethyladenosine trans 99.2 1.5E-10 5.1E-15 98.7 11.1 92 64-168 27-118 (299)
241 3opn_A Putative hemolysin; str 99.2 1.1E-11 3.7E-16 102.0 3.7 97 79-188 37-135 (232)
242 3reo_A (ISO)eugenol O-methyltr 99.2 1.9E-10 6.6E-15 100.7 11.2 97 79-194 203-304 (368)
243 2r6z_A UPF0341 protein in RSP 99.1 3E-11 1E-15 100.9 5.5 91 69-165 73-170 (258)
244 2nyu_A Putative ribosomal RNA 99.1 1.7E-10 5.9E-15 91.4 9.4 101 78-190 21-145 (196)
245 3hp7_A Hemolysin, putative; st 99.1 1.9E-11 6.6E-16 103.4 3.7 97 79-188 85-183 (291)
246 3p9c_A Caffeic acid O-methyltr 99.1 3E-10 1E-14 99.3 11.0 97 79-194 201-302 (364)
247 4e2x_A TCAB9; kijanose, tetron 99.1 4.1E-11 1.4E-15 106.4 5.4 99 79-190 107-208 (416)
248 4a6d_A Hydroxyindole O-methylt 99.1 3.9E-10 1.3E-14 98.2 11.5 105 78-194 178-287 (353)
249 3lcv_B Sisomicin-gentamicin re 99.1 6.7E-10 2.3E-14 91.8 12.1 114 66-191 118-237 (281)
250 2ih2_A Modification methylase 99.1 1.4E-10 4.7E-15 103.0 8.2 108 63-188 23-162 (421)
251 1m6y_A S-adenosyl-methyltransf 99.1 4.3E-10 1.5E-14 95.8 10.4 86 77-167 24-109 (301)
252 3ll7_A Putative methyltransfer 99.1 1.7E-10 6E-15 101.9 8.1 77 80-165 94-172 (410)
253 2okc_A Type I restriction enzy 99.1 5.4E-10 1.8E-14 100.3 11.3 119 62-188 154-305 (445)
254 3gru_A Dimethyladenosine trans 99.1 1.4E-09 4.9E-14 92.3 13.2 104 56-173 28-131 (295)
255 2zfu_A Nucleomethylin, cerebra 99.1 1.6E-10 5.3E-15 93.2 6.3 96 67-191 55-152 (215)
256 3k0b_A Predicted N6-adenine-sp 99.1 4.6E-10 1.6E-14 99.1 9.9 93 65-165 187-316 (393)
257 2oyr_A UPF0341 protein YHIQ; a 99.1 3.9E-11 1.3E-15 100.0 2.3 86 71-165 78-173 (258)
258 3frh_A 16S rRNA methylase; met 99.1 4.6E-09 1.6E-13 86.0 14.3 108 68-190 94-206 (253)
259 3ldg_A Putative uncharacterize 99.0 1E-09 3.5E-14 96.6 11.0 114 66-187 181-340 (384)
260 3ldu_A Putative methylase; str 99.0 4.8E-10 1.6E-14 98.8 8.6 102 78-187 194-341 (385)
261 1fp1_D Isoliquiritigenin 2'-O- 99.0 2.5E-10 8.4E-15 100.1 5.7 97 79-194 209-310 (372)
262 1fp2_A Isoflavone O-methyltran 99.0 6E-10 2E-14 96.8 7.3 98 78-194 187-292 (352)
263 3c6k_A Spermine synthase; sper 99.0 1.1E-09 3.8E-14 95.3 8.7 107 78-189 204-330 (381)
264 3tqs_A Ribosomal RNA small sub 99.0 3.6E-09 1.2E-13 88.0 10.9 99 56-166 7-106 (255)
265 4azs_A Methyltransferase WBDD; 99.0 1.8E-09 6E-14 99.8 9.4 80 78-166 65-144 (569)
266 2xyq_A Putative 2'-O-methyl tr 98.9 2.5E-09 8.4E-14 90.5 7.8 89 78-190 62-171 (290)
267 2p41_A Type II methyltransfera 98.9 5.6E-10 1.9E-14 95.3 3.5 95 79-189 82-190 (305)
268 3fut_A Dimethyladenosine trans 98.9 1.1E-08 3.9E-13 85.7 11.0 100 64-177 32-131 (271)
269 2ar0_A M.ecoki, type I restric 98.9 5.5E-09 1.9E-13 95.9 9.4 120 63-188 153-310 (541)
270 1qam_A ERMC' methyltransferase 98.9 1E-08 3.6E-13 84.6 10.2 73 65-143 16-88 (244)
271 1zg3_A Isoflavanone 4'-O-methy 98.9 4E-09 1.4E-13 91.8 7.9 98 78-194 192-297 (358)
272 2oxt_A Nucleoside-2'-O-methylt 98.9 5.7E-10 1.9E-14 93.4 2.4 97 79-189 74-184 (265)
273 2wa2_A Non-structural protein 98.9 3.7E-10 1.3E-14 95.1 1.0 97 79-189 82-192 (276)
274 3lkd_A Type I restriction-modi 98.8 1.5E-07 5.2E-12 86.2 17.3 124 60-188 198-356 (542)
275 4gqb_A Protein arginine N-meth 98.8 1.5E-08 5.2E-13 93.9 8.9 98 81-187 359-464 (637)
276 3uzu_A Ribosomal RNA small sub 98.8 4.4E-08 1.5E-12 82.5 10.7 82 56-143 20-102 (279)
277 3v97_A Ribosomal RNA large sub 98.7 2.8E-08 9.7E-13 93.8 9.4 118 66-188 177-345 (703)
278 1yub_A Ermam, rRNA methyltrans 98.7 4.4E-10 1.5E-14 92.8 -2.6 110 66-188 16-143 (245)
279 3ftd_A Dimethyladenosine trans 98.7 5.4E-08 1.8E-12 80.6 9.8 118 56-188 9-129 (249)
280 3khk_A Type I restriction-modi 98.6 3.6E-08 1.2E-12 90.4 7.2 122 60-188 226-393 (544)
281 3ua3_A Protein arginine N-meth 98.6 1.5E-07 5.3E-12 87.4 9.9 105 80-187 410-531 (745)
282 3s1s_A Restriction endonucleas 98.6 1.1E-06 3.7E-11 83.0 15.4 140 43-188 277-463 (878)
283 1qyr_A KSGA, high level kasuga 98.6 1.4E-07 4.7E-12 78.3 8.1 94 65-167 7-101 (252)
284 1wg8_A Predicted S-adenosylmet 98.5 3.8E-07 1.3E-11 76.2 9.3 83 77-169 20-102 (285)
285 2ld4_A Anamorsin; methyltransf 98.5 4.2E-08 1.4E-12 76.4 2.9 89 78-192 11-103 (176)
286 2oo3_A Protein involved in cat 98.4 1.7E-07 5.9E-12 78.3 4.7 111 68-188 81-196 (283)
287 2k4m_A TR8_protein, UPF0146 pr 98.3 4E-06 1.4E-10 63.0 9.3 83 72-178 27-111 (153)
288 3tka_A Ribosomal RNA small sub 98.1 9.1E-06 3.1E-10 69.5 9.0 85 78-168 56-140 (347)
289 3pvc_A TRNA 5-methylaminomethy 98.0 2.8E-06 9.6E-11 80.1 3.5 109 79-189 58-210 (689)
290 4auk_A Ribosomal RNA large sub 97.9 5E-05 1.7E-09 65.9 9.3 71 78-166 210-280 (375)
291 3evf_A RNA-directed RNA polyme 97.9 2.3E-05 8E-10 65.0 6.9 117 65-193 58-186 (277)
292 3vyw_A MNMC2; tRNA wobble urid 97.9 8.5E-05 2.9E-09 62.9 10.0 105 79-188 96-224 (308)
293 3ufb_A Type I restriction-modi 97.9 7.7E-05 2.6E-09 68.2 10.3 124 61-188 199-360 (530)
294 2px2_A Genome polyprotein [con 97.8 1.5E-05 5E-10 65.5 3.5 94 78-188 72-181 (269)
295 3gcz_A Polyprotein; flavivirus 97.6 1.5E-05 5.2E-10 66.3 2.1 101 78-189 89-200 (282)
296 2zig_A TTHA0409, putative modi 97.6 0.00023 7.8E-09 60.1 8.6 57 69-128 223-281 (297)
297 1i4w_A Mitochondrial replicati 97.5 0.00021 7E-09 61.9 7.9 59 80-143 59-117 (353)
298 3eld_A Methyltransferase; flav 97.5 0.00011 3.9E-09 61.5 5.9 101 78-189 80-190 (300)
299 3p8z_A Mtase, non-structural p 97.5 0.00074 2.5E-08 54.7 9.4 98 78-188 77-184 (267)
300 3r24_A NSP16, 2'-O-methyl tran 97.4 0.00063 2.1E-08 56.9 9.1 88 79-189 109-216 (344)
301 3ps9_A TRNA 5-methylaminomethy 97.4 0.00069 2.4E-08 63.5 9.5 108 80-189 67-218 (676)
302 3lkz_A Non-structural protein 97.2 0.0016 5.4E-08 54.5 9.1 99 78-188 93-202 (321)
303 2py6_A Methyltransferase FKBM; 97.0 0.0015 5.1E-08 57.7 7.7 49 78-126 225-274 (409)
304 2efj_A 3,7-dimethylxanthine me 97.0 0.0026 8.8E-08 55.6 8.9 78 80-164 53-157 (384)
305 3iht_A S-adenosyl-L-methionine 97.0 0.0085 2.9E-07 45.2 10.4 114 70-194 29-151 (174)
306 3b5i_A S-adenosyl-L-methionine 96.9 0.0013 4.3E-08 57.4 6.1 37 80-116 53-103 (374)
307 1g55_A DNA cytosine methyltran 96.8 0.0027 9.1E-08 54.7 7.4 76 80-165 2-77 (343)
308 1f8f_A Benzyl alcohol dehydrog 96.8 0.0022 7.6E-08 55.5 6.7 102 77-191 188-290 (371)
309 1g60_A Adenine-specific methyl 96.8 0.003 1E-07 52.1 7.0 58 69-129 200-259 (260)
310 1m6e_X S-adenosyl-L-methionnin 96.8 0.00048 1.6E-08 59.7 2.2 108 80-191 52-210 (359)
311 3g7u_A Cytosine-specific methy 96.7 0.0054 1.8E-07 53.5 8.7 101 81-191 3-120 (376)
312 3s2e_A Zinc-containing alcohol 96.7 0.0028 9.6E-08 54.1 6.7 100 76-190 163-263 (340)
313 1pqw_A Polyketide synthase; ro 96.7 0.0016 5.6E-08 51.0 4.4 99 77-189 36-136 (198)
314 1pl8_A Human sorbitol dehydrog 96.6 0.009 3.1E-07 51.4 9.2 103 75-190 167-273 (356)
315 2dph_A Formaldehyde dismutase; 96.5 0.0032 1.1E-07 55.1 6.0 106 75-190 181-299 (398)
316 4eez_A Alcohol dehydrogenase 1 96.4 0.028 9.5E-07 47.9 10.7 103 76-190 160-263 (348)
317 4ej6_A Putative zinc-binding d 96.3 0.0056 1.9E-07 53.0 6.2 106 75-191 178-285 (370)
318 1e3j_A NADP(H)-dependent ketos 96.2 0.024 8.1E-07 48.6 9.3 104 75-190 164-271 (352)
319 2c0c_A Zinc binding alcohol de 96.1 0.012 4E-07 50.8 7.0 100 76-190 160-261 (362)
320 3fpc_A NADP-dependent alcohol 96.1 0.0047 1.6E-07 53.0 4.5 105 75-191 162-267 (352)
321 1v3u_A Leukotriene B4 12- hydr 96.1 0.0077 2.6E-07 51.2 5.8 99 78-190 144-244 (333)
322 4a2c_A Galactitol-1-phosphate 96.1 0.03 1E-06 47.6 9.5 105 76-192 157-262 (346)
323 3jv7_A ADH-A; dehydrogenase, n 96.1 0.013 4.4E-07 50.0 7.1 103 76-191 168-271 (345)
324 1boo_A Protein (N-4 cytosine-s 96.0 0.0056 1.9E-07 52.2 4.6 53 131-188 13-82 (323)
325 1cdo_A Alcohol dehydrogenase; 96.0 0.022 7.4E-07 49.3 8.4 98 77-190 190-294 (374)
326 4b7c_A Probable oxidoreductase 96.0 0.0097 3.3E-07 50.6 6.1 101 76-190 146-248 (336)
327 1kol_A Formaldehyde dehydrogen 96.0 0.014 4.8E-07 50.9 7.1 107 75-191 181-301 (398)
328 3uko_A Alcohol dehydrogenase c 96.0 0.0093 3.2E-07 51.7 6.0 99 77-191 191-296 (378)
329 1p0f_A NADP-dependent alcohol 96.0 0.017 5.8E-07 49.9 7.6 101 77-190 189-293 (373)
330 3gms_A Putative NADPH:quinone 96.0 0.0073 2.5E-07 51.6 5.1 101 77-191 142-244 (340)
331 1g60_A Adenine-specific methyl 96.0 0.0043 1.5E-07 51.2 3.4 53 132-189 4-73 (260)
332 3m6i_A L-arabinitol 4-dehydrog 95.9 0.05 1.7E-06 46.7 10.3 105 75-190 175-283 (363)
333 1rjd_A PPM1P, carboxy methyl t 95.9 0.099 3.4E-06 44.7 11.9 116 71-189 89-232 (334)
334 1e3i_A Alcohol dehydrogenase, 95.9 0.032 1.1E-06 48.2 9.1 98 77-190 193-297 (376)
335 2jhf_A Alcohol dehydrogenase E 95.9 0.022 7.7E-07 49.1 8.0 98 77-190 189-293 (374)
336 1uuf_A YAHK, zinc-type alcohol 95.9 0.044 1.5E-06 47.4 9.6 97 76-190 191-288 (369)
337 2uyo_A Hypothetical protein ML 95.9 0.24 8.2E-06 41.8 13.9 110 79-191 102-219 (310)
338 3ip1_A Alcohol dehydrogenase, 95.8 0.026 8.9E-07 49.4 8.1 105 78-191 212-319 (404)
339 2fzw_A Alcohol dehydrogenase c 95.8 0.024 8.1E-07 48.9 7.7 98 77-190 188-292 (373)
340 2hcy_A Alcohol dehydrogenase 1 95.8 0.027 9.2E-07 48.1 7.9 100 77-190 167-269 (347)
341 3qwb_A Probable quinone oxidor 95.8 0.0075 2.6E-07 51.3 4.3 99 78-190 147-247 (334)
342 4eye_A Probable oxidoreductase 95.8 0.014 4.7E-07 49.9 6.0 99 77-190 157-257 (342)
343 2qrv_A DNA (cytosine-5)-methyl 95.7 0.086 2.9E-06 44.2 10.5 104 79-192 15-142 (295)
344 1eg2_A Modification methylase 95.7 0.0088 3E-07 50.9 4.4 54 131-189 37-105 (319)
345 2c7p_A Modification methylase 95.7 0.023 7.9E-07 48.5 6.9 96 80-192 11-122 (327)
346 1wly_A CAAR, 2-haloacrylate re 95.6 0.013 4.5E-07 49.7 5.0 99 78-190 144-244 (333)
347 3jyn_A Quinone oxidoreductase; 95.6 0.0093 3.2E-07 50.6 4.0 99 78-190 139-239 (325)
348 3uog_A Alcohol dehydrogenase; 95.5 0.014 4.8E-07 50.3 5.1 101 77-191 187-288 (363)
349 2zig_A TTHA0409, putative modi 95.5 0.0099 3.4E-07 49.9 4.0 53 131-188 20-95 (297)
350 2j3h_A NADP-dependent oxidored 95.5 0.014 4.9E-07 49.7 4.9 98 77-190 153-255 (345)
351 1rjw_A ADH-HT, alcohol dehydro 95.5 0.031 1.1E-06 47.6 7.0 100 76-190 161-261 (339)
352 2vz8_A Fatty acid synthase; tr 95.4 0.01 3.6E-07 63.2 4.7 102 80-191 1241-1349(2512)
353 4dvj_A Putative zinc-dependent 95.4 0.034 1.2E-06 47.9 7.1 97 79-189 171-269 (363)
354 1qor_A Quinone oxidoreductase; 95.4 0.01 3.6E-07 50.2 3.6 99 78-190 139-239 (327)
355 1jvb_A NAD(H)-dependent alcoho 95.4 0.021 7.2E-07 48.8 5.6 102 76-190 167-271 (347)
356 3two_A Mannitol dehydrogenase; 95.3 0.062 2.1E-06 45.8 8.5 92 76-190 173-265 (348)
357 4dup_A Quinone oxidoreductase; 95.3 0.017 5.8E-07 49.6 4.8 98 78-190 166-265 (353)
358 2h6e_A ADH-4, D-arabinose 1-de 95.3 0.017 5.9E-07 49.3 4.8 100 76-190 168-269 (344)
359 3fwz_A Inner membrane protein 95.3 0.07 2.4E-06 39.2 7.6 93 81-188 8-103 (140)
360 3ubt_Y Modification methylase 95.2 0.1 3.5E-06 44.1 9.5 93 82-191 2-111 (331)
361 2zb4_A Prostaglandin reductase 95.1 0.03 1E-06 48.0 5.7 102 76-191 155-261 (357)
362 1vj0_A Alcohol dehydrogenase, 95.1 0.028 9.6E-07 48.7 5.6 102 77-190 193-298 (380)
363 3qv2_A 5-cytosine DNA methyltr 95.0 0.083 2.8E-06 45.0 8.3 77 79-166 9-86 (327)
364 1yb5_A Quinone oxidoreductase; 94.9 0.025 8.6E-07 48.5 4.8 99 78-190 169-269 (351)
365 1iz0_A Quinone oxidoreductase; 94.9 0.087 3E-06 43.9 8.0 92 77-189 123-217 (302)
366 2eih_A Alcohol dehydrogenase; 94.9 0.029 9.9E-07 47.8 5.1 99 78-190 165-265 (343)
367 2b5w_A Glucose dehydrogenase; 94.9 0.1 3.5E-06 44.7 8.6 93 81-190 174-273 (357)
368 2d8a_A PH0655, probable L-thre 94.8 0.043 1.5E-06 46.9 5.9 99 79-190 167-267 (348)
369 1piw_A Hypothetical zinc-type 94.7 0.075 2.6E-06 45.6 7.3 99 76-190 176-276 (360)
370 3fbg_A Putative arginate lyase 94.7 0.092 3.1E-06 44.8 7.7 95 79-188 150-246 (346)
371 2j8z_A Quinone oxidoreductase; 94.5 0.051 1.7E-06 46.6 5.7 99 78-190 161-261 (354)
372 3gqv_A Enoyl reductase; medium 94.4 0.18 6E-06 43.5 9.0 98 78-190 163-263 (371)
373 3gaz_A Alcohol dehydrogenase s 94.4 0.08 2.8E-06 45.1 6.7 96 77-189 148-245 (343)
374 1xa0_A Putative NADPH dependen 94.1 0.074 2.5E-06 44.9 5.9 93 82-190 152-246 (328)
375 3llv_A Exopolyphosphatase-rela 93.9 0.29 9.8E-06 35.6 8.0 93 80-188 6-101 (141)
376 2aef_A Calcium-gated potassium 93.8 0.69 2.4E-05 36.8 10.8 95 80-188 9-103 (234)
377 4h0n_A DNMT2; SAH binding, tra 93.6 0.094 3.2E-06 44.8 5.5 102 80-192 3-121 (333)
378 1id1_A Putative potassium chan 93.5 0.4 1.4E-05 35.5 8.3 99 80-188 3-103 (153)
379 3nx4_A Putative oxidoreductase 93.3 0.16 5.4E-06 42.7 6.5 91 82-190 149-241 (324)
380 3krt_A Crotonyl COA reductase; 93.2 0.1 3.5E-06 46.3 5.3 103 77-190 226-344 (456)
381 3c85_A Putative glutathione-re 93.1 0.5 1.7E-05 36.0 8.6 96 80-188 39-137 (183)
382 2dq4_A L-threonine 3-dehydroge 93.1 0.071 2.4E-06 45.4 4.0 96 79-189 164-261 (343)
383 4a0s_A Octenoyl-COA reductase/ 93.1 0.21 7.1E-06 44.1 7.1 102 77-190 218-336 (447)
384 4dcm_A Ribosomal RNA large sub 93.0 0.26 8.7E-06 42.7 7.5 95 79-189 38-135 (375)
385 1lss_A TRK system potassium up 93.0 1.2 4E-05 31.8 10.0 95 81-187 5-100 (140)
386 2g1u_A Hypothetical protein TM 92.9 0.46 1.6E-05 35.2 7.9 99 78-188 17-116 (155)
387 1gu7_A Enoyl-[acyl-carrier-pro 92.9 0.29 1E-05 41.8 7.6 102 78-190 165-275 (364)
388 1boo_A Protein (N-4 cytosine-s 92.8 0.15 5.1E-06 43.2 5.6 68 70-142 241-310 (323)
389 1eg2_A Modification methylase 92.7 0.22 7.7E-06 42.1 6.5 76 68-147 229-312 (319)
390 1yqd_A Sinapyl alcohol dehydro 92.7 0.59 2E-05 40.0 9.3 94 79-189 187-281 (366)
391 1lnq_A MTHK channels, potassiu 92.7 0.73 2.5E-05 38.9 9.7 95 80-188 115-209 (336)
392 3ggo_A Prephenate dehydrogenas 92.5 0.49 1.7E-05 39.9 8.4 89 80-187 33-125 (314)
393 1pjc_A Protein (L-alanine dehy 92.4 0.4 1.4E-05 41.2 7.8 97 78-188 165-265 (361)
394 4ezb_A Uncharacterized conserv 92.2 1.3 4.3E-05 37.3 10.5 90 80-188 24-119 (317)
395 1tt7_A YHFP; alcohol dehydroge 92.1 0.11 3.9E-06 43.8 3.8 91 82-190 153-247 (330)
396 3l9w_A Glutathione-regulated p 92.0 0.34 1.2E-05 42.5 7.0 96 80-188 4-100 (413)
397 3ic5_A Putative saccharopine d 92.0 1.1 3.9E-05 30.8 8.7 81 80-176 5-89 (118)
398 4a27_A Synaptic vesicle membra 91.9 0.14 4.9E-06 43.6 4.4 97 77-190 140-238 (349)
399 3eod_A Protein HNR; response r 91.9 2 6.8E-05 29.9 10.0 77 104-188 7-85 (130)
400 2cf5_A Atccad5, CAD, cinnamyl 91.9 0.45 1.5E-05 40.6 7.5 95 79-190 180-275 (357)
401 3goh_A Alcohol dehydrogenase, 91.8 0.26 8.8E-06 41.3 5.7 87 78-189 141-228 (315)
402 3oig_A Enoyl-[acyl-carrier-pro 91.8 4.2 0.00014 32.6 13.0 109 79-188 6-145 (266)
403 3me5_A Cytosine-specific methy 91.7 0.47 1.6E-05 42.6 7.5 76 81-165 89-178 (482)
404 2cdc_A Glucose dehydrogenase g 91.7 0.38 1.3E-05 41.2 6.8 93 80-190 181-278 (366)
405 2vhw_A Alanine dehydrogenase; 91.6 0.37 1.3E-05 41.7 6.7 98 78-189 166-267 (377)
406 4f3n_A Uncharacterized ACR, CO 91.5 0.34 1.2E-05 42.7 6.4 48 79-126 137-188 (432)
407 2eez_A Alanine dehydrogenase; 91.4 0.73 2.5E-05 39.7 8.4 99 78-190 164-266 (369)
408 2vn8_A Reticulon-4-interacting 91.2 0.49 1.7E-05 40.6 7.1 97 77-189 181-279 (375)
409 3pi7_A NADH oxidoreductase; gr 91.2 0.52 1.8E-05 40.0 7.1 96 81-190 166-263 (349)
410 3l4b_C TRKA K+ channel protien 90.5 0.9 3.1E-05 35.7 7.5 95 82-188 2-97 (218)
411 3pid_A UDP-glucose 6-dehydroge 90.5 1.6 5.4E-05 38.5 9.6 102 76-193 32-156 (432)
412 2g5c_A Prephenate dehydrogenas 90.0 1.3 4.3E-05 36.2 8.3 88 81-187 2-93 (281)
413 1h2b_A Alcohol dehydrogenase; 89.9 0.65 2.2E-05 39.6 6.6 99 75-190 182-285 (359)
414 3k31_A Enoyl-(acyl-carrier-pro 89.9 5.8 0.0002 32.6 12.3 84 79-165 29-117 (296)
415 3gg2_A Sugar dehydrogenase, UD 89.7 1.6 5.5E-05 38.6 9.1 97 81-190 3-122 (450)
416 3pxx_A Carveol dehydrogenase; 89.6 6 0.0002 32.0 12.1 107 79-188 9-151 (287)
417 3f6c_A Positive transcription 89.5 2.3 7.9E-05 29.7 8.5 75 106-188 3-80 (134)
418 4fs3_A Enoyl-[acyl-carrier-pro 89.3 7.4 0.00025 31.2 13.4 83 78-164 4-94 (256)
419 3kht_A Response regulator; PSI 89.2 4.3 0.00015 28.7 9.9 80 104-189 5-88 (144)
420 2rjn_A Response regulator rece 89.1 3.4 0.00012 29.7 9.4 77 104-188 7-85 (154)
421 3ijr_A Oxidoreductase, short c 89.1 4.4 0.00015 33.2 11.0 107 79-188 46-180 (291)
422 3i42_A Response regulator rece 88.8 3 0.0001 28.8 8.6 76 105-188 4-83 (127)
423 3b1f_A Putative prephenate deh 88.8 3.4 0.00012 33.7 10.1 89 80-187 6-98 (290)
424 1zsy_A Mitochondrial 2-enoyl t 88.7 0.98 3.4E-05 38.4 6.9 100 77-189 165-269 (357)
425 3grc_A Sensor protein, kinase; 88.4 4.8 0.00016 28.2 9.6 77 104-188 6-86 (140)
426 4fgs_A Probable dehydrogenase 88.4 4.5 0.00015 33.2 10.4 109 74-188 23-157 (273)
427 3hzh_A Chemotaxis response reg 88.3 2.6 8.8E-05 30.6 8.3 79 105-188 37-117 (157)
428 3t8y_A CHEB, chemotaxis respon 88.2 1.8 6.3E-05 31.8 7.4 93 89-188 10-104 (164)
429 3tqh_A Quinone oxidoreductase; 88.2 0.85 2.9E-05 38.1 6.1 95 75-189 148-244 (321)
430 4g65_A TRK system potassium up 88.0 4.4 0.00015 35.9 10.8 112 65-187 219-331 (461)
431 4eso_A Putative oxidoreductase 87.9 4.7 0.00016 32.3 10.2 82 78-165 6-91 (255)
432 3grk_A Enoyl-(acyl-carrier-pro 87.8 10 0.00035 31.0 13.4 85 78-165 29-118 (293)
433 3jte_A Response regulator rece 87.4 4.9 0.00017 28.3 9.1 79 105-189 4-84 (143)
434 3p2y_A Alanine dehydrogenase/p 87.3 1.5 5.1E-05 38.0 7.1 103 79-197 183-309 (381)
435 3kto_A Response regulator rece 87.2 2.7 9.2E-05 29.6 7.6 77 104-188 6-86 (136)
436 1jw9_B Molybdopterin biosynthe 87.2 3 0.0001 33.7 8.6 78 80-165 31-130 (249)
437 3hv2_A Response regulator/HD d 87.1 3.7 0.00013 29.5 8.4 78 104-189 14-93 (153)
438 3lte_A Response regulator; str 87.0 5.5 0.00019 27.5 9.1 77 104-188 6-85 (132)
439 3cg4_A Response regulator rece 86.9 6.2 0.00021 27.6 10.2 77 104-188 7-87 (142)
440 3cnb_A DNA-binding response re 86.9 5.9 0.0002 27.7 9.3 78 104-188 8-90 (143)
441 3ioy_A Short-chain dehydrogena 86.9 4.3 0.00015 33.8 9.7 86 79-165 7-96 (319)
442 2zay_A Response regulator rece 86.8 2.7 9.4E-05 29.9 7.5 78 104-189 8-89 (147)
443 2qxy_A Response regulator; reg 86.7 5.2 0.00018 28.1 8.9 76 104-188 4-81 (142)
444 3abi_A Putative uncharacterize 86.7 3.9 0.00013 34.8 9.5 81 79-176 15-97 (365)
445 3eul_A Possible nitrate/nitrit 86.6 3.4 0.00012 29.7 7.9 78 104-188 15-95 (152)
446 1xg5_A ARPG836; short chain de 86.4 4.6 0.00016 32.7 9.4 86 79-165 31-120 (279)
447 3gt0_A Pyrroline-5-carboxylate 86.4 0.61 2.1E-05 37.5 4.0 87 81-187 3-94 (247)
448 2qr3_A Two-component system re 86.3 4.5 0.00015 28.3 8.4 77 104-188 3-86 (140)
449 4e7p_A Response regulator; DNA 86.3 6.2 0.00021 28.1 9.3 77 105-188 21-100 (150)
450 1x13_A NAD(P) transhydrogenase 86.3 1.3 4.5E-05 38.6 6.3 41 79-121 171-212 (401)
451 1l7d_A Nicotinamide nucleotide 86.3 1.4 4.9E-05 38.0 6.5 42 79-122 171-213 (384)
452 3cg0_A Response regulator rece 86.3 3.7 0.00013 28.7 7.9 77 104-188 9-88 (140)
453 4e21_A 6-phosphogluconate dehy 86.3 1.9 6.6E-05 36.9 7.3 91 79-187 21-112 (358)
454 3h2s_A Putative NADH-flavin re 86.2 6.5 0.00022 30.2 9.9 69 82-165 2-71 (224)
455 3ce6_A Adenosylhomocysteinase; 86.2 2.2 7.6E-05 38.3 7.8 87 78-188 272-359 (494)
456 3e8x_A Putative NAD-dependent 86.2 2.1 7.1E-05 33.7 7.0 72 79-165 20-93 (236)
457 3h8v_A Ubiquitin-like modifier 86.0 3.7 0.00013 34.2 8.6 61 78-140 34-114 (292)
458 3lua_A Response regulator rece 85.9 5.5 0.00019 27.9 8.7 78 104-189 4-88 (140)
459 4dio_A NAD(P) transhydrogenase 85.9 2.2 7.4E-05 37.3 7.4 42 79-122 189-231 (405)
460 3ruf_A WBGU; rossmann fold, UD 85.9 3 0.0001 34.8 8.3 80 79-165 24-109 (351)
461 1zkd_A DUF185; NESG, RPR58, st 85.9 1.1 3.8E-05 38.9 5.5 46 81-126 82-133 (387)
462 1qkk_A DCTD, C4-dicarboxylate 85.8 4.7 0.00016 29.0 8.4 78 104-189 3-82 (155)
463 3a10_A Response regulator; pho 85.8 6 0.0002 26.6 8.6 75 106-188 3-79 (116)
464 3qvo_A NMRA family protein; st 85.8 2.2 7.4E-05 33.7 7.0 84 80-178 23-110 (236)
465 1wma_A Carbonyl reductase [NAD 85.8 3.7 0.00013 32.8 8.5 84 79-165 3-91 (276)
466 3rqi_A Response regulator prot 85.8 5.4 0.00018 29.9 9.0 77 104-188 7-85 (184)
467 2b4a_A BH3024; flavodoxin-like 85.7 6.4 0.00022 27.5 9.0 79 103-189 14-95 (138)
468 3nzo_A UDP-N-acetylglucosamine 85.7 6.1 0.00021 34.0 10.3 83 78-165 33-121 (399)
469 2y0c_A BCEC, UDP-glucose dehyd 85.4 3.6 0.00012 36.7 8.8 99 78-189 6-127 (478)
470 3cz5_A Two-component response 85.4 4.7 0.00016 28.9 8.2 79 104-189 5-86 (153)
471 1tmy_A CHEY protein, TMY; chem 85.4 6 0.0002 26.8 8.4 67 105-178 3-71 (120)
472 3gt7_A Sensor protein; structu 85.3 8.4 0.00029 27.6 9.8 68 104-179 7-76 (154)
473 4g65_A TRK system potassium up 85.2 2.8 9.5E-05 37.2 7.9 74 80-165 3-77 (461)
474 3to5_A CHEY homolog; alpha(5)b 85.1 1.3 4.4E-05 32.3 4.8 70 101-177 9-80 (134)
475 3h7a_A Short chain dehydrogena 84.9 5.7 0.0002 31.7 9.2 83 79-165 6-92 (252)
476 3trk_A Nonstructural polyprote 84.8 0.64 2.2E-05 38.2 3.2 37 155-191 210-260 (324)
477 3v8b_A Putative dehydrogenase, 84.7 4.4 0.00015 33.1 8.5 84 79-165 27-114 (283)
478 3g79_A NDP-N-acetyl-D-galactos 84.7 4.2 0.00014 36.3 8.9 104 78-195 16-152 (478)
479 2gkg_A Response regulator homo 84.6 4.7 0.00016 27.4 7.6 76 105-188 6-86 (127)
480 1dlj_A UDP-glucose dehydrogena 84.5 6.2 0.00021 34.2 9.8 89 82-188 2-115 (402)
481 3hwr_A 2-dehydropantoate 2-red 84.4 3.3 0.00011 34.6 7.8 96 79-188 18-118 (318)
482 4fn4_A Short chain dehydrogena 84.4 6.7 0.00023 31.8 9.3 84 78-164 5-92 (254)
483 2hmt_A YUAA protein; RCK, KTN, 84.2 4 0.00014 28.9 7.3 94 80-187 6-101 (144)
484 3ucx_A Short chain dehydrogena 84.1 7.6 0.00026 31.1 9.7 84 78-164 9-96 (264)
485 3r3s_A Oxidoreductase; structu 84.1 11 0.00039 30.7 10.9 107 79-188 48-183 (294)
486 3crn_A Response regulator rece 84.0 7 0.00024 27.1 8.4 75 105-188 4-81 (132)
487 1bg6_A N-(1-D-carboxylethyl)-L 84.0 5.4 0.00019 33.4 9.0 98 81-189 5-108 (359)
488 3dqp_A Oxidoreductase YLBE; al 83.9 2.4 8.4E-05 32.8 6.4 70 82-165 2-72 (219)
489 3oj0_A Glutr, glutamyl-tRNA re 83.8 7 0.00024 28.1 8.5 88 78-187 19-107 (144)
490 3ilh_A Two component response 83.6 7.2 0.00025 27.3 8.4 84 104-188 9-98 (146)
491 4a7p_A UDP-glucose dehydrogena 83.6 2.6 8.8E-05 37.3 6.9 100 79-191 7-130 (446)
492 3o38_A Short chain dehydrogena 83.2 7.1 0.00024 31.2 9.1 85 79-165 21-110 (266)
493 3ri6_A O-acetylhomoserine sulf 83.2 22 0.00076 30.9 14.4 125 64-195 81-209 (430)
494 2gdz_A NAD+-dependent 15-hydro 83.2 12 0.00041 29.8 10.5 86 79-165 6-95 (267)
495 3r6d_A NAD-dependent epimerase 83.2 2.2 7.4E-05 33.2 5.8 73 81-166 6-83 (221)
496 3k96_A Glycerol-3-phosphate de 83.1 4.5 0.00016 34.5 8.1 96 80-188 29-131 (356)
497 4ina_A Saccharopine dehydrogen 83.0 6.3 0.00021 34.2 9.1 90 81-177 2-97 (405)
498 3ojo_A CAP5O; rossmann fold, c 83.0 1.9 6.5E-05 38.0 5.8 97 80-193 11-132 (431)
499 3t4x_A Oxidoreductase, short c 82.8 5.9 0.0002 31.9 8.5 83 79-165 9-94 (267)
500 3sju_A Keto reductase; short-c 82.8 6.5 0.00022 31.9 8.8 84 79-165 23-110 (279)
No 1
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=100.00 E-value=2.8e-41 Score=282.31 Aligned_cols=247 Identities=89% Similarity=1.408 Sum_probs=203.2
Q ss_pred CCCccccccccccccccccccccCCcHHHHHHHHHhcCCCCCcHHHHHHHHHHHhCCCCccccCHHHHHHHHHHHhhcCC
Q 025824 1 MASNAEDQQNQQGRHQEVGHKSLLQSDALYQYILETSVYPREPESMKELRELTAKHPWNIMTTSADEGQFLNMLLKLVNA 80 (247)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~ 80 (247)
|+++.++.....+.++.|..+.+..++++++|+.+++.++.+++.+.++++++.+++++.+.+++..+.++..++...++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~ 80 (247)
T 1sui_A 1 MATNEDQKQTESGRHQEVGHKSLLQSDALYQYILETSVFPREHEAMKELREVTAKHPWNIMTTSADEGQFLSMLLKLINA 80 (247)
T ss_dssp --------------------CCSBSCHHHHHHHHHHHTSSSCTTHHHHHHHHHHTSTTGGGSCCHHHHHHHHHHHHHTTC
T ss_pred CCCCCCCCCcccccccccccccCCchHHHHHHHHHcccCCCCCHHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHhhCc
Confidence 55555666667777888888899999999999999876678899999999999999999999999999999999999899
Q ss_pred CEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCceeEE
Q 025824 81 KNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDFI 160 (247)
Q Consensus 81 ~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~fD~v 160 (247)
++|||||||+|++++++++.++++++|+++|+++++++.|+++++..|+.++++++++|+.+.++.+..++...++||+|
T Consensus 81 ~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD~V 160 (247)
T 1sui_A 81 KNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSYDFI 160 (247)
T ss_dssp CEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCBSEE
T ss_pred CEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCEEEE
Confidence 99999999999999999999987899999999999999999999999998899999999998877653221114689999
Q ss_pred EEcCCccchHHHHHHHHhcCCCCeEEEEecccccccccCCCCCcchhhhchHHHHHHHHHHHHHcCCCeeEEeeecCCee
Q 025824 161 FVDADKDNYLNYHKRLIELVKVGGVIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGV 240 (247)
Q Consensus 161 ~id~~~~~~~~~l~~~~~~L~~gG~lv~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~lp~~dG~ 240 (247)
|+|+++..+..+++.+.++|+|||+|++||++|.|.+.++.....+.+.+....++++|++.+..++++..+++|++||+
T Consensus 161 ~~d~~~~~~~~~l~~~~~~LkpGG~lv~d~~~~~g~v~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~lp~~dG~ 240 (247)
T 1sui_A 161 FVDADKDNYLNYHKRLIDLVKVGGVIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAVDPRIEICMLPVGDGI 240 (247)
T ss_dssp EECSCSTTHHHHHHHHHHHBCTTCCEEEECTTGGGGGGCCTTSCCCHHHHHHHHHHHHHHHHHHTCTTBCCEEECSTTCE
T ss_pred EEcCchHHHHHHHHHHHHhCCCCeEEEEecCCcCCcccCCCccchhhhhhHHHHHHHHHHHHHhhCCCeEEEEEecCCcc
Confidence 99999999999999999999999999999999999998876433222224568899999999999999999999999999
Q ss_pred EEEEEcC
Q 025824 241 TICRRIK 247 (247)
Q Consensus 241 ~i~~k~~ 247 (247)
++++|++
T Consensus 241 ~l~~k~~ 247 (247)
T 1sui_A 241 TICRRIK 247 (247)
T ss_dssp EEECBCC
T ss_pred EEEEEcC
Confidence 9999874
No 2
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=100.00 E-value=7.4e-40 Score=272.05 Aligned_cols=234 Identities=57% Similarity=0.951 Sum_probs=202.0
Q ss_pred cccccccccccCCcHHHHHHHHHhcCCCCCcHHHHHHHHHHHhCCCCccccCHHHHHHHHHHHhhcCCCEEEEEcccccH
Q 025824 13 GRHQEVGHKSLLQSDALYQYILETSVYPREPESMKELRELTAKHPWNIMTTSADEGQFLNMLLKLVNAKNTMEIGVYTGY 92 (247)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~vLEiG~g~G~ 92 (247)
+++..|..+.+..++.+++|+.+++.++.+++.+.++++++.+++++.+.+++..++++..++...++++|||||||+|+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~VLeiG~G~G~ 83 (237)
T 3c3y_A 4 AVMKQVKNTGLLQSEELCQYILRTSVYPREAGFLKELREANESHPDSYMSTSPLAGQLMSFVLKLVNAKKTIEVGVFTGY 83 (237)
T ss_dssp ---------CCBSCHHHHHHHHHHHTGGGSCHHHHHHHHHHTTSTTGGGSCCHHHHHHHHHHHHHTTCCEEEEECCTTSH
T ss_pred cccccccccccCchHHHHHHHHHcccCCCCCHHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHhhCCCEEEEeCCCCCH
Confidence 34556667788899999999999876667889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCceeEEEEcCCccchHHH
Q 025824 93 SLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDFIFVDADKDNYLNY 172 (247)
Q Consensus 93 st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~fD~v~id~~~~~~~~~ 172 (247)
+++++++.++++++++++|+++++++.|+++++..|+.++++++++|+.+.++.+..++...++||+||+|+++..+..+
T Consensus 84 ~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD~I~~d~~~~~~~~~ 163 (237)
T 3c3y_A 84 SLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGSYDFGFVDADKPNYIKY 163 (237)
T ss_dssp HHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCEEEEEECSCGGGHHHH
T ss_pred HHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCcCEEEECCchHHHHHH
Confidence 99999999987899999999999999999999999997789999999998887764322113689999999999999999
Q ss_pred HHHHHhcCCCCeEEEEecccccccccCCCCCcchhhhchHHHHHHHHHHHHHcCCCeeEEeeecCCeeEEEEEcC
Q 025824 173 HKRLIELVKVGGVIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGVTICRRIK 247 (247)
Q Consensus 173 l~~~~~~L~~gG~lv~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~lp~~dG~~i~~k~~ 247 (247)
++.+.++|+|||+|++||++|.|.+.++.... .++.+.....+++|++.+..+|++.++++|++||+++++|+.
T Consensus 164 l~~~~~~L~pGG~lv~d~~~~~g~~~~~~~~~-~~~~r~~~~~i~~~~~~l~~~~~~~~~~lp~~dG~~~~~~~~ 237 (237)
T 3c3y_A 164 HERLMKLVKVGGIVAYDNTLWGGTVAQPESEV-PDFMKENREAVIELNKLLAADPRIEIVHLPLGDGITFCRRLY 237 (237)
T ss_dssp HHHHHHHEEEEEEEEEECTTGGGGGGSCGGGS-CGGGHHHHHHHHHHHHHHHHCTTEEEEEECSTTCEEEEEECC
T ss_pred HHHHHHhcCCCeEEEEecCCcCCccCCCcccc-hhhHHHHHHHHHHHHHHHhcCCCeEEEEEEeCCceEEEEEcC
Confidence 99999999999999999999999998774321 124456788999999999999999999999999999999974
No 3
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=100.00 E-value=2.8e-39 Score=269.41 Aligned_cols=221 Identities=38% Similarity=0.647 Sum_probs=197.7
Q ss_pred ccccccCCcHHHHHHHHHhcCCCCCcHHHHHHHHHHHhCCCCccccCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHH
Q 025824 18 VGHKSLLQSDALYQYILETSVYPREPESMKELRELTAKHPWNIMTTSADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLAT 97 (247)
Q Consensus 18 ~~~~~~~~~~~~~~y~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~vLEiG~g~G~st~~l 97 (247)
|+.+.+..++++++|+.+++ +.+++.+.++++.+.+.+++.+.+++..+.++..++...++++|||||||+|++++++
T Consensus 1 m~~~~~~~~~~~~~Y~~~~~--~~~~~~l~~~~~~~~~~~~~~~~i~~~~~~~l~~l~~~~~~~~VLDiG~G~G~~t~~l 78 (242)
T 3r3h_A 1 MVMKHLSLTPELYKYLLDIS--LREHPALAALRKETSTMELANMQVAPEQAQFMQMLIRLTRAKKVLELGTFTGYSALAM 78 (242)
T ss_dssp ---CCCCCCHHHHHHHHHHH--CCCCHHHHHHHHTTSSSGGGGTSCCHHHHHHHHHHHHHHTCSEEEEEESCCSHHHHHH
T ss_pred CCCCcccCCHHHHHHHHHhc--CCCCHHHHHHHHHHHhCCCCCCccCHHHHHHHHHHHhhcCcCEEEEeeCCcCHHHHHH
Confidence 44567778899999999976 4778899999999988888889999999999999999999999999999999999999
Q ss_pred HhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCceeEEEEcCCccchHHHHHHHH
Q 025824 98 ALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDFIFVDADKDNYLNYHKRLI 177 (247)
Q Consensus 98 a~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~fD~v~id~~~~~~~~~l~~~~ 177 (247)
++.++++++|+++|+++++++.|+++++..|+.++++++++|+.+.++.+..++ ..++||+||+|+++..+..+++.+.
T Consensus 79 a~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~-~~~~fD~V~~d~~~~~~~~~l~~~~ 157 (242)
T 3r3h_A 79 SLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEG-GEHQFDFIFIDADKTNYLNYYELAL 157 (242)
T ss_dssp HHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHH-CSSCEEEEEEESCGGGHHHHHHHHH
T ss_pred HHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhcc-CCCCEeEEEEcCChHHhHHHHHHHH
Confidence 999877899999999999999999999999998899999999998877654322 1378999999999999999999999
Q ss_pred hcCCCCeEEEEecccccccccCCCCCcchhhhchHHHHHHHHHHHHHcCCCeeEEeeecCCeeEEEEEcC
Q 025824 178 ELVKVGGVIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGVTICRRIK 247 (247)
Q Consensus 178 ~~L~~gG~lv~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~lp~~dG~~i~~k~~ 247 (247)
++|+|||+|++||++|.|.+.++... +..+.++++|++.+.++++++++++|++||+++++|++
T Consensus 158 ~~LkpGG~lv~d~~~~~g~v~~~~~~------~~~~~~~~~~~~~l~~~~~~~~~~lp~~dG~~~~~k~~ 221 (242)
T 3r3h_A 158 KLVTPKGLIAIDNIFWDGKVIDPNDT------SGQTREIKKLNQVIKNDSRVFVSLLAIADGMFLVQPIA 221 (242)
T ss_dssp HHEEEEEEEEEECSSSSSCSSCTTCC------CHHHHHHHHHHHHHHTCCSEEEEEESSSSCEEEEEEC-
T ss_pred HhcCCCeEEEEECCccCCcccCcccc------ChHHHHHHHHHHHHhhCCCEEEEEEEccCceEEEEEcC
Confidence 99999999999999999999887653 35568999999999999999999999999999999874
No 4
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=100.00 E-value=5.9e-38 Score=258.03 Aligned_cols=205 Identities=18% Similarity=0.268 Sum_probs=186.2
Q ss_pred cHHHHHHHHHhcCCCCCcHHHHHHHHHHHhCCCCccccCHHHHHHHHHHHhhcCCC---EEEEEcccccHHHHHHHhhCC
Q 025824 26 SDALYQYILETSVYPREPESMKELRELTAKHPWNIMTTSADEGQFLNMLLKLVNAK---NTMEIGVYTGYSLLATALALP 102 (247)
Q Consensus 26 ~~~~~~y~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~---~vLEiG~g~G~st~~la~~~~ 102 (247)
.+++.+|+.++. .+++.+.++++++.+.++|.+ .+..++++..++...+++ +|||||||+|++++++++.++
T Consensus 5 ~~~~~~y~~~~~---~~~~~l~~~~~~a~~~~~p~i--~~~~~~~l~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~ 79 (221)
T 3dr5_A 5 FEYLRTYVESTT---ETDAAVARAREDAAEFGLPAP--DEMTGQLLTTLAATTNGNGSTGAIAITPAAGLVGLYILNGLA 79 (221)
T ss_dssp HHHHHHHHHTTS---CCCHHHHHHHHHHHHTTCCCC--CHHHHHHHHHHHHHSCCTTCCEEEEESTTHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHcC---CCCHHHHHHHHHHHHcCCCCC--CHHHHHHHHHHHHhhCCCCCCCEEEEcCCchHHHHHHHHhCC
Confidence 567889998743 578999999999999998764 699999999999998888 999999999999999999988
Q ss_pred CCCEEEEEeCCcchHHHHHHHHHHcCCC-CcEEEEEecchhhhHHHHhhhcCCCceeEEEEcCCccchHHHHHHHHhcCC
Q 025824 103 DDGKILAMDINRENYELGLPVIQKAGVA-HKIDFREGPALPVLDLLIQDEKNHGSFDFIFVDADKDNYLNYHKRLIELVK 181 (247)
Q Consensus 103 ~~~~v~~iD~~~~~~~~a~~~~~~~g~~-~~i~~~~gd~~~~l~~l~~~~~~~~~fD~v~id~~~~~~~~~l~~~~~~L~ 181 (247)
++++|+++|+++++++.|+++++..|+. ++++++++|+.+.++.+ ..++||+||+|+++.++..+++.+.++|+
T Consensus 80 ~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~-----~~~~fD~V~~d~~~~~~~~~l~~~~~~Lk 154 (221)
T 3dr5_A 80 DNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRL-----ANDSYQLVFGQVSPMDLKALVDAAWPLLR 154 (221)
T ss_dssp TTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGS-----CTTCEEEEEECCCTTTHHHHHHHHHHHEE
T ss_pred CCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHh-----cCCCcCeEEEcCcHHHHHHHHHHHHHHcC
Confidence 7899999999999999999999999997 79999999999887654 14789999999999999999999999999
Q ss_pred CCeEEEEecccccccccCCCCCcchhhhchHHHHHHHHHHHHHcCCCeeEEeeecCCeeEEEEEc
Q 025824 182 VGGVIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGVTICRRI 246 (247)
Q Consensus 182 ~gG~lv~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~lp~~dG~~i~~k~ 246 (247)
|||+|++||++|.|.+.++... +..+.++++|++++.++|+++++++|+|||+++++|-
T Consensus 155 pGG~lv~dn~~~~g~v~~~~~~------~~~~~~~~~~~~~l~~~~~~~~~~lp~gdGl~~~~~~ 213 (221)
T 3dr5_A 155 RGGALVLADALLDGTIADQTRK------DRDTQAARDADEYIRSIEGAHVARLPLGAGLTVVTKA 213 (221)
T ss_dssp EEEEEEETTTTGGGTCSCSSCC------CHHHHHHHHHHHHHTTCTTEEEEEESSTTCEEEEEEC
T ss_pred CCcEEEEeCCCCCCcCCCCCCC------ChHHHHHHHHHHHHhhCCCeeEEEeeccchHHHHHHH
Confidence 9999999999999999887643 4556789999999999999999999999999999984
No 5
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=100.00 E-value=1.7e-36 Score=250.99 Aligned_cols=223 Identities=38% Similarity=0.612 Sum_probs=196.7
Q ss_pred cccccccccCCcHHHHHHHHHhcCCCCCcHHHHHHHHHHHhCCCCccccCHHHHHHHHHHHhhcCCCEEEEEcccccHHH
Q 025824 15 HQEVGHKSLLQSDALYQYILETSVYPREPESMKELRELTAKHPWNIMTTSADEGQFLNMLLKLVNAKNTMEIGVYTGYSL 94 (247)
Q Consensus 15 ~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~vLEiG~g~G~st 94 (247)
+++|..+....++.+++|+.+++ +.+++.+.++++.+.+.+++.|.+.+..+.++..++...++++|||||||+|+++
T Consensus 10 ~~~~~~~~~~~~~~~~~y~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~ 87 (232)
T 3cbg_A 10 HGSMGKGITGFDPSLYSYLQSIS--ADDSFYLAQLRRETAHLPGAPMQISPEQAQFLGLLISLTGAKQVLEIGVFRGYSA 87 (232)
T ss_dssp -----CCBTTSCHHHHHHHHHTS--CCCCHHHHHHHHHTTTSTTGGGSCCHHHHHHHHHHHHHHTCCEEEEECCTTSHHH
T ss_pred ccccccccccchHHHHHHHHHhC--CCCCHHHHHHHHHHHHcCCCccCcCHHHHHHHHHHHHhcCCCEEEEecCCCCHHH
Confidence 56777777888999999999864 4778899999999999999988899999999999998889999999999999999
Q ss_pred HHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCceeEEEEcCCccchHHHHH
Q 025824 95 LATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDFIFVDADKDNYLNYHK 174 (247)
Q Consensus 95 ~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~fD~v~id~~~~~~~~~l~ 174 (247)
+++++.++++++++++|+++++++.|+++++..|+.++++++.+|+.+.++.+...+ ..++||+||+|+++..+..+++
T Consensus 88 ~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~-~~~~fD~V~~d~~~~~~~~~l~ 166 (232)
T 3cbg_A 88 LAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGK-PLPEFDLIFIDADKRNYPRYYE 166 (232)
T ss_dssp HHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSS-SCCCEEEEEECSCGGGHHHHHH
T ss_pred HHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcC-CCCCcCEEEECCCHHHHHHHHH
Confidence 999999876789999999999999999999999987889999999988777653210 0168999999999889999999
Q ss_pred HHHhcCCCCeEEEEecccccccccCCCCCcchhhhchHHHHHHHHHHHHHcCCCeeEEeeecCCeeEEEEEc
Q 025824 175 RLIELVKVGGVIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGVTICRRI 246 (247)
Q Consensus 175 ~~~~~L~~gG~lv~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~lp~~dG~~i~~k~ 246 (247)
.+.++|+|||+|+++|++|.|.+.++... +.....+++|++.+..+|++.++++|++||+++++|+
T Consensus 167 ~~~~~LkpgG~lv~~~~~~~g~~~~~~~~------~~~~~~~~~~~~~l~~~~~~~~~~lp~~dG~~~~~~~ 232 (232)
T 3cbg_A 167 IGLNLLRRGGLMVIDNVLWHGKVTEVDPQ------EAQTQVLQQFNRDLAQDERVRISVIPLGDGMTLALKK 232 (232)
T ss_dssp HHHHTEEEEEEEEEECTTGGGGGGCSSCC------SHHHHHHHHHHHHHTTCTTEEEEEECSBTCEEEEEEC
T ss_pred HHHHHcCCCeEEEEeCCCcCCccCCcccC------ChHHHHHHHHHHHHhhCCCeEEEEEEcCCeEEEEEeC
Confidence 99999999999999999999999877643 4678899999999999999999999999999999985
No 6
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=100.00 E-value=9.1e-36 Score=244.57 Aligned_cols=221 Identities=34% Similarity=0.594 Sum_probs=198.2
Q ss_pred cccccccCCcHHHHHHHHHhcCCCCCcHHHHHHHHHHH-hCCCCccccCHHHHHHHHHHHhhcCCCEEEEEcccccHHHH
Q 025824 17 EVGHKSLLQSDALYQYILETSVYPREPESMKELRELTA-KHPWNIMTTSADEGQFLNMLLKLVNAKNTMEIGVYTGYSLL 95 (247)
Q Consensus 17 ~~~~~~~~~~~~~~~y~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~l~~l~~~~~~~~vLEiG~g~G~st~ 95 (247)
+|+.+.+..++.+++|+.++. +.+++.+.++++.+. +++++.+.+++..+.++..++...++.+|||||||+|+++.
T Consensus 3 ~m~~~~~~~~~~~~~y~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~ 80 (225)
T 3tr6_A 3 AMSINTTLLTPELYQYLLQVS--LREPPLLAELREETTRSFSTYAMQTAPEQAQLLALLVKLMQAKKVIDIGTFTGYSAI 80 (225)
T ss_dssp -CCCCSCCCCHHHHHHHHHTT--CCCCHHHHHHHHHHHHHCTTGGGSCCHHHHHHHHHHHHHHTCSEEEEECCTTSHHHH
T ss_pred ccccCCCCCCHHHHHHHHHhc--CCCCHHHHHHHHHHHhhCCCCccccCHHHHHHHHHHHHhhCCCEEEEeCCcchHHHH
Confidence 477788889999999999864 577888999999888 89999899999999999999999899999999999999999
Q ss_pred HHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCceeEEEEcCCccchHHHHHH
Q 025824 96 ATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDFIFVDADKDNYLNYHKR 175 (247)
Q Consensus 96 ~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~fD~v~id~~~~~~~~~l~~ 175 (247)
++++.++++++|+++|+++++++.|+++++..++.++++++++|+.+.++.+...+ ..++||+||+|++...+..+++.
T Consensus 81 ~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~-~~~~fD~v~~~~~~~~~~~~l~~ 159 (225)
T 3tr6_A 81 AMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAG-QAWQYDLIYIDADKANTDLYYEE 159 (225)
T ss_dssp HHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTT-CTTCEEEEEECSCGGGHHHHHHH
T ss_pred HHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhcc-CCCCccEEEECCCHHHHHHHHHH
Confidence 99999876899999999999999999999999998889999999988877653211 11789999999998889999999
Q ss_pred HHhcCCCCeEEEEecccccccccCCCCCcchhhhchHHHHHHHHHHHHHcCCCeeEEeeecCCeeEEEEEc
Q 025824 176 LIELVKVGGVIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGVTICRRI 246 (247)
Q Consensus 176 ~~~~L~~gG~lv~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~lp~~dG~~i~~k~ 246 (247)
+.++|+|||+|+++|++|.|.+.++... +.....+++|++.+..+++++++++|++||+.+++|+
T Consensus 160 ~~~~L~pgG~lv~~~~~~~g~~~~~~~~------~~~~~~~~~~~~~l~~~~~~~~~~lp~~dG~~~~~k~ 224 (225)
T 3tr6_A 160 SLKLLREGGLIAVDNVLRRGQVADEENQ------SENNQLIRLFNQKVYKDERVDMILIPIGDGLTLARKK 224 (225)
T ss_dssp HHHHEEEEEEEEEECSSGGGGGGCTTCC------CHHHHHHHHHHHHHHHCTTEEEEEECSTTCEEEEEEC
T ss_pred HHHhcCCCcEEEEeCCCcCCcccCcccc------ChHHHHHHHHHHHHhcCCCeEEEEEEcCCccEEEEEC
Confidence 9999999999999999999998877653 3557799999999999999999999999999999986
No 7
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=100.00 E-value=2.2e-34 Score=236.19 Aligned_cols=213 Identities=25% Similarity=0.426 Sum_probs=192.0
Q ss_pred CcHHHHHHHHHhcCCCCCcHHHHHHHHHHHhCCCCccccCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCC
Q 025824 25 QSDALYQYILETSVYPREPESMKELRELTAKHPWNIMTTSADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDD 104 (247)
Q Consensus 25 ~~~~~~~y~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~vLEiG~g~G~st~~la~~~~~~ 104 (247)
.-+.+.+|+.++. +.+++.+.++++.+.+.++|.+.+++..++++..++...++.+|||||||+|+++.++++.++++
T Consensus 6 ~~~~~~~y~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~ 83 (223)
T 3duw_A 6 TWTAVDQYVSDVL--IPKDSTLEEVLQVNAAANLPAHDVSPTQGKFLQLLVQIQGARNILEIGTLGGYSTIWLARGLSSG 83 (223)
T ss_dssp HHHHHHHHHHHHH--SCCCHHHHHHHHHHHHTTCCSCSCCHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCSS
T ss_pred cHHHHHHHHHHhC--CCCCHHHHHHHHHHhhCCCCCcccCHHHHHHHHHHHHhhCCCEEEEecCCccHHHHHHHHhCCCC
Confidence 3567889999875 57788999999999999999998999999999999998899999999999999999999998867
Q ss_pred CEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCceeEEEEcCCccchHHHHHHHHhcCCCCe
Q 025824 105 GKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDFIFVDADKDNYLNYHKRLIELVKVGG 184 (247)
Q Consensus 105 ~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~fD~v~id~~~~~~~~~l~~~~~~L~~gG 184 (247)
++|+++|+++++++.|++++...|+.++++++++|+.+.++.+...+ .++||+||+|+.+..+..+++.+.++|+|||
T Consensus 84 ~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~--~~~fD~v~~d~~~~~~~~~l~~~~~~L~pgG 161 (223)
T 3duw_A 84 GRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEK--YEPFDFIFIDADKQNNPAYFEWALKLSRPGT 161 (223)
T ss_dssp CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTT--CCCCSEEEECSCGGGHHHHHHHHHHTCCTTC
T ss_pred CEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcC--CCCcCEEEEcCCcHHHHHHHHHHHHhcCCCc
Confidence 89999999999999999999999998889999999988877664321 2679999999999999999999999999999
Q ss_pred EEEEecccccccccCCCCCcchhhhchHHHHHHHHHHHHHcCCCeeEEeeec-----CCeeEEEEEcC
Q 025824 185 VIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAADPRIEICMLPV-----GDGVTICRRIK 247 (247)
Q Consensus 185 ~lv~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~lp~-----~dG~~i~~k~~ 247 (247)
+|+++|++|.|.+.++... +.....+++|++.+..++++..+++|+ +||+.++++++
T Consensus 162 ~lv~~~~~~~g~~~~~~~~------~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~~~dG~~~~~~~~ 223 (223)
T 3duw_A 162 VIIGDNVVREGEVIDNTSN------DPRVQGIRRFYELIAAEPRVSATALQTVGSKGYDGFIMAVVKE 223 (223)
T ss_dssp EEEEESCSGGGGGGCTTCC------CHHHHHHHHHHHHHHHCTTEEEEEEEEEETTEEEEEEEEEEC-
T ss_pred EEEEeCCCcCCcccCcccc------chHHHHHHHHHHHHhhCCCeEEEEEeccCCCCCCeeEEEEEeC
Confidence 9999999999999887653 456788999999999999999999999 99999999875
No 8
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=100.00 E-value=9.4e-34 Score=233.14 Aligned_cols=213 Identities=38% Similarity=0.680 Sum_probs=190.6
Q ss_pred CcHHHHHHHHHhcCCCCCcHHHHHHHHHHHhCCCCccccCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCC
Q 025824 25 QSDALYQYILETSVYPREPESMKELRELTAKHPWNIMTTSADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDD 104 (247)
Q Consensus 25 ~~~~~~~y~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~vLEiG~g~G~st~~la~~~~~~ 104 (247)
..+.+++|+.++. +.+++.+.+++..+.++.++.+.+++..+.++..++...++++|||||||+|++++++++.++++
T Consensus 17 ~~~~~~~y~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~ 94 (229)
T 2avd_A 17 EDSRLWQYLLSRS--MREHPALRSLRLLTLEQPQGDSMMTCEQAQLLANLARLIQAKKALDLGTFTGYSALALALALPAD 94 (229)
T ss_dssp TTSHHHHHHHHTT--CCCCHHHHHHHHHHHTSTTGGGSCCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHTTSCTT
T ss_pred hHHHHHHHHHHcC--CCCCHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCCccHHHHHHHHhCCCC
Confidence 4678999999864 46788999999999998888888999999999999998899999999999999999999988767
Q ss_pred CEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCceeEEEEcCCccchHHHHHHHHhcCCCCe
Q 025824 105 GKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDFIFVDADKDNYLNYHKRLIELVKVGG 184 (247)
Q Consensus 105 ~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~fD~v~id~~~~~~~~~l~~~~~~L~~gG 184 (247)
++|+++|+++++++.|+++++..|+.++++++++|+.+.++.+..++ ..++||+||+|+++..+..+++.+.++|+|||
T Consensus 95 ~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~-~~~~~D~v~~d~~~~~~~~~l~~~~~~L~pgG 173 (229)
T 2avd_A 95 GRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAG-EAGTFDVAVVDADKENCSAYYERCLQLLRPGG 173 (229)
T ss_dssp CEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTT-CTTCEEEEEECSCSTTHHHHHHHHHHHEEEEE
T ss_pred CEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcC-CCCCccEEEECCCHHHHHHHHHHHHHHcCCCe
Confidence 89999999999999999999999988899999999988777653211 11689999999998889999999999999999
Q ss_pred EEEEecccccccccCCCCCcchhhhchHHHHHHHHHHHHHcCCCeeEEeeecCCeeEEEEEc
Q 025824 185 VIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGVTICRRI 246 (247)
Q Consensus 185 ~lv~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~lp~~dG~~i~~k~ 246 (247)
+++++|++|.|.+.++... +.....+++|++.+..+++++++++|++||+.+++|+
T Consensus 174 ~lv~~~~~~~g~~~~~~~~------~~~~~~~~~~~~~l~~~~~~~~~~lp~~dGl~~~~k~ 229 (229)
T 2avd_A 174 ILAVLRVLWRGKVLQPPKG------DVAAECVRNLNERIRRDVRVYISLLPLGDGLTLAFKI 229 (229)
T ss_dssp EEEEECCSGGGGGGSCCTT------CHHHHHHHHHHHHHHHCTTEEEEEECSTTCEEEEEEC
T ss_pred EEEEECCCcCCcccCcccC------ChHHHHHHHHHHHHhhCCCEEEEEEecCCceEEEEEC
Confidence 9999999999999877543 5678899999999999999999999999999999985
No 9
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=100.00 E-value=1.2e-33 Score=236.08 Aligned_cols=210 Identities=31% Similarity=0.483 Sum_probs=189.2
Q ss_pred cHHHHHHHHHhcCCCCCcHHHHHHHHHHHhCCCCccccCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCC
Q 025824 26 SDALYQYILETSVYPREPESMKELRELTAKHPWNIMTTSADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDG 105 (247)
Q Consensus 26 ~~~~~~y~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~vLEiG~g~G~st~~la~~~~~~~ 105 (247)
-..+.+|+.++. +.+++.+.++++.+.+.++|.+.+++..+.++..++...++++|||||||+|+++.++++.+++++
T Consensus 12 ~~~~~~y~~~~~--~~~~~~l~~~~~~~~~~~~p~~~~~~~~~~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~ 89 (248)
T 3tfw_A 12 WSAVDNYLIKAL--IPGDPVLDRVLENNHRAGLPAHDVAANQGQFLALLVRLTQAKRILEIGTLGGYSTIWMARELPADG 89 (248)
T ss_dssp HHHHHHHHHHHH--SCCCHHHHHHHHHHHHTTCBSCCCCHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTSCTTC
T ss_pred hHHHHHHHHhcC--CCCCHHHHHHHHHHHHcCCCccccCHHHHHHHHHHHhhcCCCEEEEecCCchHHHHHHHHhCCCCC
Confidence 456889998864 577888999999999999999889999999999999988999999999999999999999988789
Q ss_pred EEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCceeEEEEcCCccchHHHHHHHHhcCCCCeE
Q 025824 106 KILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDFIFVDADKDNYLNYHKRLIELVKVGGV 185 (247)
Q Consensus 106 ~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~fD~v~id~~~~~~~~~l~~~~~~L~~gG~ 185 (247)
+|+++|+++++++.|++++...|+.++++++++|+.+.++.+. ..++||+||+|++...+..+++.+.++|+|||+
T Consensus 90 ~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~----~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~ 165 (248)
T 3tfw_A 90 QLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLG----ECPAFDLIFIDADKPNNPHYLRWALRYSRPGTL 165 (248)
T ss_dssp EEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCC----SCCCCSEEEECSCGGGHHHHHHHHHHTCCTTCE
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcC----CCCCeEEEEECCchHHHHHHHHHHHHhcCCCeE
Confidence 9999999999999999999999998899999999988776541 134899999999999999999999999999999
Q ss_pred EEEecccccccccCCCCCcchhhhchHHHHHHHHHHHHHcCCCeeEEee-ecC----CeeEEEEEcC
Q 025824 186 IGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAADPRIEICML-PVG----DGVTICRRIK 247 (247)
Q Consensus 186 lv~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l-p~~----dG~~i~~k~~ 247 (247)
|+++|++|.|.+.++... +.....+++|++.+..+|+++.+++ |+| ||+.++++++
T Consensus 166 lv~~~~~~~g~v~~~~~~------~~~~~~~~~~~~~l~~~~~~~~~~l~~~g~~~~DG~~i~~~~~ 226 (248)
T 3tfw_A 166 IIGDNVVRDGEVVNPQSA------DERVQGVRQFIEMMGAEPRLTATALQTVGTKGWDGFTLAWVNA 226 (248)
T ss_dssp EEEECCSGGGGGGCTTCC------CHHHHHHHHHHHHHHHCTTEEEEEEEECSTTCSEEEEEEEECC
T ss_pred EEEeCCCcCCcccCcccc------chHHHHHHHHHHHHhhCCCEEEEEeecCCCCCCCeeEEEEEeC
Confidence 999999999999887653 5678899999999999999999887 676 9999999874
No 10
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=100.00 E-value=3.8e-34 Score=236.76 Aligned_cols=214 Identities=22% Similarity=0.311 Sum_probs=187.2
Q ss_pred cccCCcHHHHHHHHHhcCCCCCcHHHHHHHHHHHhCCCCccccCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhh
Q 025824 21 KSLLQSDALYQYILETSVYPREPESMKELRELTAKHPWNIMTTSADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALA 100 (247)
Q Consensus 21 ~~~~~~~~~~~y~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~vLEiG~g~G~st~~la~~ 100 (247)
+....++.+.+|+.++. +.+++.+.++++++.+.++|.+ .+..+.++..++...++.+|||||||+|+++.+++..
T Consensus 17 ~~~~~~~~l~~yl~~~~--~~~~~~l~~l~~~~~~~~~~~~--~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~la~~ 92 (232)
T 3ntv_A 17 RGSHMDDLNKKYLIDLH--QHQNSSIEVLREFAEVNEVPIV--DRLTLDLIKQLIRMNNVKNILEIGTAIGYSSMQFASI 92 (232)
T ss_dssp ----CHHHHHHHHHHHH--GGGCCGGGGHHHHHHHTTCCCC--CHHHHHHHHHHHHHHTCCEEEEECCSSSHHHHHHHTT
T ss_pred CCCCCCHHHHHHHHHhC--CCCCHHHHHHHHHHHHcCCCCc--CHHHHHHHHHHHhhcCCCEEEEEeCchhHHHHHHHHh
Confidence 45666889999999875 4567778889999988888755 4999999999999889999999999999999999997
Q ss_pred CCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhH-HHHhhhcCCCceeEEEEcCCccchHHHHHHHHhc
Q 025824 101 LPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLD-LLIQDEKNHGSFDFIFVDADKDNYLNYHKRLIEL 179 (247)
Q Consensus 101 ~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~-~l~~~~~~~~~fD~v~id~~~~~~~~~l~~~~~~ 179 (247)
.+ +++|+++|+++++++.|+++++..++.++++++++|+.+.++ .+ .++||+||+|+....+..+++.+.++
T Consensus 93 ~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~------~~~fD~V~~~~~~~~~~~~l~~~~~~ 165 (232)
T 3ntv_A 93 SD-DIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVN------DKVYDMIFIDAAKAQSKKFFEIYTPL 165 (232)
T ss_dssp CT-TCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHT------TSCEEEEEEETTSSSHHHHHHHHGGG
T ss_pred CC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhc------cCCccEEEEcCcHHHHHHHHHHHHHh
Confidence 66 899999999999999999999999998899999999998877 54 57999999999999999999999999
Q ss_pred CCCCeEEEEecccccccccCCCCCcchhhhchHHHHHHHHHHHHHcCCCeeEEeeecCCeeEEEEEc
Q 025824 180 VKVGGVIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGVTICRRI 246 (247)
Q Consensus 180 L~~gG~lv~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~lp~~dG~~i~~k~ 246 (247)
|+|||+|++||++|.|.+.++... ..+..+.....+++|++.+..+++++++++|++||+.+++|+
T Consensus 166 LkpgG~lv~d~~~~~g~v~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~~dG~~i~~k~ 231 (232)
T 3ntv_A 166 LKHQGLVITDNVLYHGFVSDIGIV-RSRNVRQMVKKVQDYNEWLIKQPGYTTNFLNIDDGLAISIKG 231 (232)
T ss_dssp EEEEEEEEEECTTGGGGGGCGGGG-GCHHHHHHHHHHHHHHHHHHTCTTEEEEEECSTTCEEEEEEC
T ss_pred cCCCeEEEEeeCCcCccccCcccc-cchhhhHHHHHHHHHHHHHhcCCCeEEEEEEcCCceEEEEEC
Confidence 999999999999999998876541 122345667899999999999999999999999999999996
No 11
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=100.00 E-value=1.8e-32 Score=227.40 Aligned_cols=219 Identities=37% Similarity=0.604 Sum_probs=190.7
Q ss_pred ccccCCcHHHHHHHHHhcCCCCCcHHHHHHHHHHHhCCCCccccCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHh
Q 025824 20 HKSLLQSDALYQYILETSVYPREPESMKELRELTAKHPWNIMTTSADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATAL 99 (247)
Q Consensus 20 ~~~~~~~~~~~~y~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~vLEiG~g~G~st~~la~ 99 (247)
.+.+...+.+++|+..++ +.+++.+.++++.+.+.++|.+.+.+..+.++..++...++.+|||||||+|+++..+++
T Consensus 3 ~~~~~~~~~~~~y~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~ 80 (239)
T 2hnk_A 3 RKNISLTESLEEYIFRNS--VREPDSFLKLRKETGTLAQANMQISPEEGQFLNILTKISGAKRIIEIGTFTGYSSLCFAS 80 (239)
T ss_dssp CCSCCCCHHHHHHHHHTT--CCCCHHHHHHHHHHHTC---CCSCCHHHHHHHHHHHHHHTCSEEEEECCTTCHHHHHHHH
T ss_pred cccccchHHHHHHHHHcc--CCCCHHHHHHHHHHHHcCCcccccCHHHHHHHHHHHHhhCcCEEEEEeCCCCHHHHHHHH
Confidence 455677889999999864 477889999999999999998888999999999999888999999999999999999999
Q ss_pred hCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhh--------hcC-C-CceeEEEEcCCccch
Q 025824 100 ALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQD--------EKN-H-GSFDFIFVDADKDNY 169 (247)
Q Consensus 100 ~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~--------~~~-~-~~fD~v~id~~~~~~ 169 (247)
.++++++|+++|+++++++.|++++...|+.++++++.+|+.+.++.+..+ ... . ++||+||++.....+
T Consensus 81 ~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~f~~~~~~fD~I~~~~~~~~~ 160 (239)
T 2hnk_A 81 ALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSWASDFAFGPSSIDLFFLDADKENY 160 (239)
T ss_dssp HSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGGGTTTCCSTTCEEEEEECSCGGGH
T ss_pred hCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhcccccccccccCCCCCcCEEEEeCCHHHH
Confidence 987678999999999999999999999998778999999998776654210 001 1 689999999998889
Q ss_pred HHHHHHHHhcCCCCeEEEEecccccccccCCCCCcchhhhchHHHHHHHHHHHHHcCCCeeEEeeecCCeeEEEEEc
Q 025824 170 LNYHKRLIELVKVGGVIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGVTICRRI 246 (247)
Q Consensus 170 ~~~l~~~~~~L~~gG~lv~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~lp~~dG~~i~~k~ 246 (247)
..+++.+.++|+|||+++++|++|.|.+.++... +.....+++|++.+..++++.++++|+++|+.+++|+
T Consensus 161 ~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~ 231 (239)
T 2hnk_A 161 PNYYPLILKLLKPGGLLIADNVLWDGSVADLSHQ------EPSTVGIRKFNELVYNDSLVDVSLVPIADGVSLVRKR 231 (239)
T ss_dssp HHHHHHHHHHEEEEEEEEEECSSGGGGGGCTTCC------CHHHHHHHHHHHHHHHCTTEEEEEECSTTCEEEEEEC
T ss_pred HHHHHHHHHHcCCCeEEEEEccccCCcccCcccc------chHHHHHHHHHHHHhhCCCeEEEEEEcCCceEeeeeh
Confidence 9999999999999999999999999998877643 4677889999999999999999999999999999986
No 12
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=100.00 E-value=2.4e-32 Score=222.23 Aligned_cols=204 Identities=18% Similarity=0.270 Sum_probs=174.7
Q ss_pred CcHHHHHHHHHhcCCCCCcHHHHHHHHHHHhCCCCccccCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCC
Q 025824 25 QSDALYQYILETSVYPREPESMKELRELTAKHPWNIMTTSADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDD 104 (247)
Q Consensus 25 ~~~~~~~y~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~vLEiG~g~G~st~~la~~~~~~ 104 (247)
..+.+++|+.++. +.+++.+.++++++.++++|. +.+..+.++..++...++++|||||||+|+++.++++.++++
T Consensus 6 ~~~~~~~y~~~~~--~~~~~~~~~~~~~~~~~~~p~--~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~ 81 (210)
T 3c3p_A 6 VDSRIGAYLDGLL--PEADPVVAAMEQIARERNIPI--VDRQTGRLLYLLARIKQPQLVVVPGDGLGCASWWFARAISIS 81 (210)
T ss_dssp BCHHHHHHHHHTS--CSCCHHHHHHHHHHHHTTCCC--CCHHHHHHHHHHHHHHCCSEEEEESCGGGHHHHHHHTTSCTT
T ss_pred hHHHHHHHHHHhc--CCCCHHHHHHHHHHHHcCCCC--cCHHHHHHHHHHHHhhCCCEEEEEcCCccHHHHHHHHhCCCC
Confidence 5678999999864 577888999999999988864 569999999998888889999999999999999999988767
Q ss_pred CEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCceeEEEEcCCccchHHHHHHHHhcCCCCe
Q 025824 105 GKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDFIFVDADKDNYLNYHKRLIELVKVGG 184 (247)
Q Consensus 105 ~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~fD~v~id~~~~~~~~~l~~~~~~L~~gG 184 (247)
++|+++|+++++++.|+++++..++.++++++++|+.+.++.+ .+ ||+||+|+....+..+++.+.++|+|||
T Consensus 82 ~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~------~~-fD~v~~~~~~~~~~~~l~~~~~~LkpgG 154 (210)
T 3c3p_A 82 SRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQ------RD-IDILFMDCDVFNGADVLERMNRCLAKNA 154 (210)
T ss_dssp CEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTC------CS-EEEEEEETTTSCHHHHHHHHGGGEEEEE
T ss_pred CEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccC------CC-CCEEEEcCChhhhHHHHHHHHHhcCCCe
Confidence 9999999999999999999999988778999999998766543 45 9999999988899999999999999999
Q ss_pred EEEEecccccccccCCCCCcchhhhchHHHHHHHHHHHHHcCCCeeEEeeecCCeeEEEEEc
Q 025824 185 VIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGVTICRRI 246 (247)
Q Consensus 185 ~lv~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~lp~~dG~~i~~k~ 246 (247)
+++++|++|.|.+.++ . .+.....+++|++.+..++++...++|+++|+.+++|+
T Consensus 155 ~lv~~~~~~~g~~~~~-~------~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~G~~~~~~~ 209 (210)
T 3c3p_A 155 LLIAVNALRRGSVAES-H------EDPETAALREFNHHLSRRRDFFTTIVPVGNGVLLGYRL 209 (210)
T ss_dssp EEEEESSSSCC-------------------CCCHHHHHHTTCTTEEEEEECSTTCEEEEEEC
T ss_pred EEEEECccccCcccCc-c------cchHHHHHHHHHHHHhhCCCeEEEEEecCCceEEEEeC
Confidence 9999999999987744 2 13456678899999999999999999999999999986
No 13
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.98 E-value=1.5e-30 Score=213.44 Aligned_cols=199 Identities=20% Similarity=0.358 Sum_probs=168.8
Q ss_pred cHHHHHHHHHhcCCCCCcHHHHHHHHHHHhCCCCccccCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCC
Q 025824 26 SDALYQYILETSVYPREPESMKELRELTAKHPWNIMTTSADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDG 105 (247)
Q Consensus 26 ~~~~~~y~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~vLEiG~g~G~st~~la~~~~~~~ 105 (247)
++++++|+.+++...++...++.+++++..+.+. +.+++..++++..++...++++|||||||+|++++++++.+++++
T Consensus 6 ~~~~~~y~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~ 84 (221)
T 3u81_A 6 EQRILRYVQQNAKPGDPQSVLEAIDTYCTQKEWA-MNVGDAKGQIMDAVIREYSPSLVLELGAYCGYSAVRMARLLQPGA 84 (221)
T ss_dssp HHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHTCG-GGCCHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHTTSCTTC
T ss_pred HHHHHHHHHhcCCCCCHHHHHHHHHHHhhhcCcC-cccCHHHHHHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhCCCCC
Confidence 6789999999875333345778999999888875 678899999999999999999999999999999999999887789
Q ss_pred EEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCceeEEEEcCCccchHHHHHHHH--hcCCCC
Q 025824 106 KILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDFIFVDADKDNYLNYHKRLI--ELVKVG 183 (247)
Q Consensus 106 ~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~fD~v~id~~~~~~~~~l~~~~--~~L~~g 183 (247)
+|+++|+++++++.|+++++..++.++++++++|+.+.++.+..+. ..++||+||+|+....+...++.+. ++|+||
T Consensus 85 ~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~-~~~~fD~V~~d~~~~~~~~~~~~~~~~~~Lkpg 163 (221)
T 3u81_A 85 RLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKY-DVDTLDMVFLDHWKDRYLPDTLLLEKCGLLRKG 163 (221)
T ss_dssp EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTS-CCCCCSEEEECSCGGGHHHHHHHHHHTTCCCTT
T ss_pred EEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhc-CCCceEEEEEcCCcccchHHHHHHHhccccCCC
Confidence 9999999999999999999999998889999999988777652100 1168999999998777775443332 899999
Q ss_pred eEEEEecccccccccCCCCCcchhhhchHHHHHHHHHHHHHcCCCeeEEeee-------cCCeeEEEEEc
Q 025824 184 GVIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAADPRIEICMLP-------VGDGVTICRRI 246 (247)
Q Consensus 184 G~lv~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~lp-------~~dG~~i~~k~ 246 (247)
|+|+++|+.++|. ++|++++.+++++.+.++| ++||+.+++++
T Consensus 164 G~lv~~~~~~~~~--------------------~~~~~~l~~~~~~~~~~~~~~~~~~~~~dG~~~~~~~ 213 (221)
T 3u81_A 164 TVLLADNVIVPGT--------------------PDFLAYVRGSSSFECTHYSSYLEYMKVVDGLEKAIYQ 213 (221)
T ss_dssp CEEEESCCCCCCC--------------------HHHHHHHHHCTTEEEEEEEEEETTTTEEEEEEEEEEC
T ss_pred eEEEEeCCCCcch--------------------HHHHHHHhhCCCceEEEcccccccCCCCCceEEEEEe
Confidence 9999999997652 5788889999999999998 79999999875
No 14
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.97 E-value=1.5e-29 Score=208.81 Aligned_cols=211 Identities=25% Similarity=0.389 Sum_probs=167.0
Q ss_pred CcHHHHHHHHHhcCCCCCcHHHHHHHHHHHhCCCCccccCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCC
Q 025824 25 QSDALYQYILETSVYPREPESMKELRELTAKHPWNIMTTSADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDD 104 (247)
Q Consensus 25 ~~~~~~~y~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~vLEiG~g~G~st~~la~~~~~~ 104 (247)
.++.+++|+.++. +.+++.+.++++++.+.+++. +.+..+.++..++...++.+|||+|||+|+++..+++.+| +
T Consensus 4 ~~~~~~~y~~~~~--~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~-~ 78 (233)
T 2gpy_A 4 IEERLKHYLEKQI--PARDQYIEQMEREAHEQQVPI--MDLLGMESLLHLLKMAAPARILEIGTAIGYSAIRMAQALP-E 78 (233)
T ss_dssp -CHHHHHHHHTTC--CCCCHHHHHHHHHHHHTTCCC--CCHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHHHCT-T
T ss_pred cHHHHHHHHHHhC--CCCCHHHHHHHHHHHHcCCCC--cCHHHHHHHHHHHhccCCCEEEEecCCCcHHHHHHHHHCC-C
Confidence 4678999999864 567889999999998888864 5699999999999888899999999999999999999987 7
Q ss_pred CEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCceeEEEEcCCccchHHHHHHHHhcCCCCe
Q 025824 105 GKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDFIFVDADKDNYLNYHKRLIELVKVGG 184 (247)
Q Consensus 105 ~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~fD~v~id~~~~~~~~~l~~~~~~L~~gG 184 (247)
++|+++|+++++++.|++++...|+.++++++.+|+.+.++.+. ..++||+||++.....+..+++.+.++|+|||
T Consensus 79 ~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~----~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG 154 (233)
T 2gpy_A 79 ATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLE----LYPLFDVLFIDAAKGQYRRFFDMYSPMVRPGG 154 (233)
T ss_dssp CEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHT----TSCCEEEEEEEGGGSCHHHHHHHHGGGEEEEE
T ss_pred CEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcc----cCCCccEEEECCCHHHHHHHHHHHHHHcCCCe
Confidence 89999999999999999999999987789999999988766541 13689999999988888999999999999999
Q ss_pred EEEEecccccccccCCCCCcchhhhchHHHHHHHHHHHHHcCCCeeEEeeecCCeeEEEEEc
Q 025824 185 VIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGVTICRRI 246 (247)
Q Consensus 185 ~lv~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~lp~~dG~~i~~k~ 246 (247)
+++++|++|.|.+.+++.. .+..+.....+++|+..+..++.+.+.++|+++|+.+++|+
T Consensus 155 ~lv~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~dG~~~~~~~ 214 (233)
T 2gpy_A 155 LILSDNVLFRGLVAETDIE--HKRHKQLATKIDTYNQWLLEHPQYDTRIFPVGDGIAISIKR 214 (233)
T ss_dssp EEEEETTTC---------------------------CTTTTCTTEEEEEECSTTCEEEEEEC
T ss_pred EEEEEcCCcCCccCCcccc--ccchhHHHHHHHHHHHHHHhCCCeEEEEEEcCCeEEEEEEc
Confidence 9999999999987655321 11112345678889999999999999999999999999986
No 15
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=99.87 E-value=1.6e-21 Score=156.76 Aligned_cols=132 Identities=13% Similarity=0.068 Sum_probs=107.3
Q ss_pred CCCCccccCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCC--CCcE
Q 025824 56 HPWNIMTTSADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGV--AHKI 133 (247)
Q Consensus 56 ~~~~~~~~~~~~~~~l~~l~~~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~--~~~i 133 (247)
-..|.+.+.+..+++|... ..++++|||||| |+||+++|+. + +++|+++|.++++++.|+++++++|+ .++|
T Consensus 9 ~~~P~~~v~~~~~~~L~~~--l~~a~~VLEiGt--GySTl~lA~~-~-~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I 82 (202)
T 3cvo_A 9 QMRPELTMPPAEAEALRMA--YEEAEVILEYGS--GGSTVVAAEL-P-GKHVTSVESDRAWARMMKAWLAANPPAEGTEV 82 (202)
T ss_dssp CCCCCCCSCHHHHHHHHHH--HHHCSEEEEESC--SHHHHHHHTS-T-TCEEEEEESCHHHHHHHHHHHHHSCCCTTCEE
T ss_pred CCCCCccCCHHHHHHHHHH--hhCCCEEEEECc--hHHHHHHHHc-C-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCCce
Confidence 3456677789999999884 457899999997 7999999984 4 79999999999999999999999998 7899
Q ss_pred EEEEecchhh--------------hHHHHhh---hcCCCceeEEEEcCCccchHHHHHHHHhcCCCCeEEEEecccccc
Q 025824 134 DFREGPALPV--------------LDLLIQD---EKNHGSFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYDNTLWNG 195 (247)
Q Consensus 134 ~~~~gd~~~~--------------l~~l~~~---~~~~~~fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv~d~~~~~g 195 (247)
+++.||+.+. ++.+... ....++||+||+|+.+. ..++..+.++|+|||+|++||+.+.+
T Consensus 83 ~~~~gda~~~~~wg~p~~~~~~~~l~~~~~~i~~~~~~~~fDlIfIDg~k~--~~~~~~~l~~l~~GG~Iv~DNv~~r~ 159 (202)
T 3cvo_A 83 NIVWTDIGPTGDWGHPVSDAKWRSYPDYPLAVWRTEGFRHPDVVLVDGRFR--VGCALATAFSITRPVTLLFDDYSQRR 159 (202)
T ss_dssp EEEECCCSSBCGGGCBSSSTTGGGTTHHHHGGGGCTTCCCCSEEEECSSSH--HHHHHHHHHHCSSCEEEEETTGGGCS
T ss_pred EEEEeCchhhhcccccccchhhhhHHHHhhhhhccccCCCCCEEEEeCCCc--hhHHHHHHHhcCCCeEEEEeCCcCCc
Confidence 9999997654 3332210 00136899999999865 37777888999999999999987654
No 16
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=99.83 E-value=2.5e-20 Score=157.32 Aligned_cols=160 Identities=15% Similarity=0.105 Sum_probs=127.7
Q ss_pred cCHHHHHHHHHHHhh----cCCCEEEEEcccccHHHHHHHhhCC----CCCEEEEEeCCcc-------------------
Q 025824 63 TSADEGQFLNMLLKL----VNAKNTMEIGVYTGYSLLATALALP----DDGKILAMDINRE------------------- 115 (247)
Q Consensus 63 ~~~~~~~~l~~l~~~----~~~~~vLEiG~g~G~st~~la~~~~----~~~~v~~iD~~~~------------------- 115 (247)
++.....+|+.++.. ..|+.|||+||+.|+|+++|++.++ ++++|+++|..+.
T Consensus 86 v~~~r~~~L~~l~~~v~~~~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~ 165 (282)
T 2wk1_A 86 IGIKRLENIRQCVEDVIGNNVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHR 165 (282)
T ss_dssp SHHHHHHHHHHHHHHHHHTTCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGG
T ss_pred cCHHHHHHHHHHHHHHHhcCCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCccccccccccccccccc
Confidence 456778788777765 4588999999999999999998764 3789999997532
Q ss_pred -------hHHHHHHHHHHcCCC-CcEEEEEecchhhhHHHHhhhcCCCceeEEEEcCCc-cchHHHHHHHHhcCCCCeEE
Q 025824 116 -------NYELGLPVIQKAGVA-HKIDFREGPALPVLDLLIQDEKNHGSFDFIFVDADK-DNYLNYHKRLIELVKVGGVI 186 (247)
Q Consensus 116 -------~~~~a~~~~~~~g~~-~~i~~~~gd~~~~l~~l~~~~~~~~~fD~v~id~~~-~~~~~~l~~~~~~L~~gG~l 186 (247)
.++.++++++++|+. ++|+++.|++.+.++.+ ..++||+||+|+++ ..+..+|+.+.++|+|||+|
T Consensus 166 ~~~~~~~~~~~ar~n~~~~gl~~~~I~li~Gda~etL~~~-----~~~~~d~vfIDaD~y~~~~~~Le~~~p~L~pGGiI 240 (282)
T 2wk1_A 166 RNSVLAVSEEEVRRNFRNYDLLDEQVRFLPGWFKDTLPTA-----PIDTLAVLRMDGDLYESTWDTLTNLYPKVSVGGYV 240 (282)
T ss_dssp GHHHHCCCHHHHHHHHHHTTCCSTTEEEEESCHHHHSTTC-----CCCCEEEEEECCCSHHHHHHHHHHHGGGEEEEEEE
T ss_pred ccccchhHHHHHHHHHHHcCCCcCceEEEEeCHHHHHhhC-----CCCCEEEEEEcCCccccHHHHHHHHHhhcCCCEEE
Confidence 467799999999994 89999999999998875 24689999999997 56788999999999999999
Q ss_pred EEecccccccccCCCCCcchhhhchHHHHHHHHHHHHHcCCCeeEEeeecCCeeEEEEEc
Q 025824 187 GYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGVTICRRI 246 (247)
Q Consensus 187 v~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~lp~~dG~~i~~k~ 246 (247)
++||+.|. ....+++++|++. .++...+.+++.+..+.+|-
T Consensus 241 v~DD~~~~---------------~G~~~Av~Ef~~~----~~i~~~i~~~~~~~v~~rk~ 281 (282)
T 2wk1_A 241 IVDDYMMC---------------PPCKDAVDEYRAK----FDIADELITIDRDGVYWQRT 281 (282)
T ss_dssp EESSCTTC---------------HHHHHHHHHHHHH----TTCCSCCEECSSSCEEEECC
T ss_pred EEcCCCCC---------------HHHHHHHHHHHHh----cCCceEEEEecCEEEEEEeC
Confidence 99998641 1224677777644 34666788888777776663
No 17
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.74 E-value=9.9e-18 Score=138.57 Aligned_cols=116 Identities=19% Similarity=0.299 Sum_probs=98.4
Q ss_pred HHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhh---CCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecch
Q 025824 65 ADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALA---LPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPAL 141 (247)
Q Consensus 65 ~~~~~~l~~l~~~~~~~~vLEiG~g~G~st~~la~~---~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~ 141 (247)
+....++..++...++.+|||||||+|+++..|++. +.++++|+++|+++++++.|+ +..++++++++|+.
T Consensus 67 p~~~~~l~~~l~~~~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~------~~~~~v~~~~gD~~ 140 (236)
T 2bm8_A 67 PDTQAVYHDMLWELRPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA------SDMENITLHQGDCS 140 (236)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG------GGCTTEEEEECCSS
T ss_pred HHHHHHHHHHHHhcCCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh------ccCCceEEEECcch
Confidence 788888888888778899999999999999999987 445799999999999988887 22368999999998
Q ss_pred hh--hHHHHhhhcCCCceeEEEEcCCccchHHHHHHHHh-cCCCCeEEEEecc
Q 025824 142 PV--LDLLIQDEKNHGSFDFIFVDADKDNYLNYHKRLIE-LVKVGGVIGYDNT 191 (247)
Q Consensus 142 ~~--l~~l~~~~~~~~~fD~v~id~~~~~~~~~l~~~~~-~L~~gG~lv~d~~ 191 (247)
+. ++.+ ...+||+|++|+.+..+...+..+.+ .|+|||+++++++
T Consensus 141 ~~~~l~~~-----~~~~fD~I~~d~~~~~~~~~l~~~~r~~LkpGG~lv~~d~ 188 (236)
T 2bm8_A 141 DLTTFEHL-----REMAHPLIFIDNAHANTFNIMKWAVDHLLEEGDYFIIEDM 188 (236)
T ss_dssp CSGGGGGG-----SSSCSSEEEEESSCSSHHHHHHHHHHHTCCTTCEEEECSC
T ss_pred hHHHHHhh-----ccCCCCEEEECCchHhHHHHHHHHHHhhCCCCCEEEEEeC
Confidence 75 4433 13479999999988788899999996 9999999999886
No 18
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.74 E-value=8.9e-18 Score=143.86 Aligned_cols=148 Identities=16% Similarity=0.265 Sum_probs=115.3
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHH--cCC-CCcEEEEEecchhhhHHHHhhhcCC
Q 025824 78 VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQK--AGV-AHKIDFREGPALPVLDLLIQDEKNH 154 (247)
Q Consensus 78 ~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~--~g~-~~~i~~~~gd~~~~l~~l~~~~~~~ 154 (247)
.++++|||||||+|..+..+++..+ ..+|+++|+++++++.|++++.. .++ .++++++.+|+.+.++.. .
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~------~ 166 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPS-VESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQN------Q 166 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTT-CCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTC------S
T ss_pred CCCCEEEEECCCchHHHHHHHHcCC-CCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhC------C
Confidence 5678999999999999999998644 68999999999999999999876 344 468999999998876542 5
Q ss_pred CceeEEEEcCCcc-------chHHHHHHHHhcCCCCeEEEEecc-cccccccCCCCCcchhhhchHHHHHHHHHHHHHcC
Q 025824 155 GSFDFIFVDADKD-------NYLNYHKRLIELVKVGGVIGYDNT-LWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAAD 226 (247)
Q Consensus 155 ~~fD~v~id~~~~-------~~~~~l~~~~~~L~~gG~lv~d~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 226 (247)
++||+||+|.... ....+++.+.+.|+|||++++++. .|.. ......++++++.+..+
T Consensus 167 ~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~--------------~~~~~~~~~~l~~~f~~ 232 (304)
T 2o07_A 167 DAFDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGECQWLH--------------LDLIKEMRQFCQSLFPV 232 (304)
T ss_dssp SCEEEEEEECC-----------CHHHHHHHHHEEEEEEEEEEEECTTTC--------------HHHHHHHHHHHHHHCSE
T ss_pred CCceEEEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEecCCcccc--------------hHHHHHHHHHHHHhCCC
Confidence 7899999997632 235689999999999999999763 2321 23445677778888777
Q ss_pred CCeeEEeeec---C-CeeEEEEEc
Q 025824 227 PRIEICMLPV---G-DGVTICRRI 246 (247)
Q Consensus 227 ~~~~~~~lp~---~-dG~~i~~k~ 246 (247)
.++....+|. | .|+.++.|.
T Consensus 233 v~~~~~~vP~~~~g~~g~~~as~~ 256 (304)
T 2o07_A 233 VAYAYCTIPTYPSGQIGFMLCSKN 256 (304)
T ss_dssp EEEEEEECTTSGGGEEEEEEEESS
T ss_pred ceeEEEEeccccCcceEEEEEeCC
Confidence 7777777786 3 588888764
No 19
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.73 E-value=1.4e-17 Score=143.25 Aligned_cols=150 Identities=18% Similarity=0.242 Sum_probs=113.2
Q ss_pred hcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHc--CC-CCcEEEEEecchhhhHHHHhhhcC
Q 025824 77 LVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKA--GV-AHKIDFREGPALPVLDLLIQDEKN 153 (247)
Q Consensus 77 ~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~--g~-~~~i~~~~gd~~~~l~~l~~~~~~ 153 (247)
..++++|||||||+|.++..+++..+ ..+|+++|+++++++.|++++... ++ .++++++.+|+.+.++..
T Consensus 106 ~~~~~~VLdIG~G~G~~~~~l~~~~~-~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~------ 178 (314)
T 2b2c_A 106 HPDPKRVLIIGGGDGGILREVLKHES-VEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNH------ 178 (314)
T ss_dssp SSSCCEEEEESCTTSHHHHHHTTCTT-CCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHC------
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHcCC-CCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhc------
Confidence 35678999999999999999998654 789999999999999999998754 33 468999999998876542
Q ss_pred CCceeEEEEcCCc------cch-HHHHHHHHhcCCCCeEEEEecccccccccCCCCCcchhhhchHHHHHHHHHHHHHcC
Q 025824 154 HGSFDFIFVDADK------DNY-LNYHKRLIELVKVGGVIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAAD 226 (247)
Q Consensus 154 ~~~fD~v~id~~~------~~~-~~~l~~~~~~L~~gG~lv~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 226 (247)
.++||+|++|... ..+ ..+++.+.+.|+|||++++++ |.+... ......+.++++.+..+
T Consensus 179 ~~~fD~Ii~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~----~~~~~~---------~~~~~~~~~~l~~vF~~ 245 (314)
T 2b2c_A 179 KNEFDVIITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQG----ESVWLH---------LPLIAHLVAFNRKIFPA 245 (314)
T ss_dssp TTCEEEEEECCC-------------HHHHHHHHEEEEEEEEEEC----CCTTTC---------HHHHHHHHHHHHHHCSE
T ss_pred CCCceEEEEcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC----CCcccC---------HHHHHHHHHHHHHHCCc
Confidence 5789999998742 112 688999999999999999875 211110 23345566777777777
Q ss_pred CCeeEEeeec---CC-eeEEEEEc
Q 025824 227 PRIEICMLPV---GD-GVTICRRI 246 (247)
Q Consensus 227 ~~~~~~~lp~---~d-G~~i~~k~ 246 (247)
.++....+|. |+ |+.++.|.
T Consensus 246 v~~~~~~iP~~~~g~~g~~~ask~ 269 (314)
T 2b2c_A 246 VTYAQSIVSTYPSGSMGYLICAKN 269 (314)
T ss_dssp EEEEEEECTTSGGGEEEEEEEESS
T ss_pred ceEEEEEecCcCCCceEEEEEeCC
Confidence 7777777886 45 88888764
No 20
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.70 E-value=1.2e-16 Score=135.30 Aligned_cols=106 Identities=18% Similarity=0.165 Sum_probs=91.5
Q ss_pred HHhhcCCCEEEEEcccccHHH-HHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhc
Q 025824 74 LLKLVNAKNTMEIGVYTGYSL-LATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEK 152 (247)
Q Consensus 74 l~~~~~~~~vLEiG~g~G~st-~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~ 152 (247)
++...++.+|||||||+|..+ +.+++ .+ +++|+++|+++++++.|+++++..|+ ++++++++|+.+. +
T Consensus 117 la~l~~g~rVLDIGcG~G~~ta~~lA~-~~-ga~V~gIDis~~~l~~Ar~~~~~~gl-~~v~~v~gDa~~l-~------- 185 (298)
T 3fpf_A 117 LGRFRRGERAVFIGGGPLPLTGILLSH-VY-GMRVNVVEIEPDIAELSRKVIEGLGV-DGVNVITGDETVI-D------- 185 (298)
T ss_dssp HTTCCTTCEEEEECCCSSCHHHHHHHH-TT-CCEEEEEESSHHHHHHHHHHHHHHTC-CSEEEEESCGGGG-G-------
T ss_pred HcCCCCcCEEEEECCCccHHHHHHHHH-cc-CCEEEEEECCHHHHHHHHHHHHhcCC-CCeEEEECchhhC-C-------
Confidence 455677899999999998655 45554 44 78999999999999999999999998 8999999999764 2
Q ss_pred CCCceeEEEEcCCccchHHHHHHHHhcCCCCeEEEEecc
Q 025824 153 NHGSFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYDNT 191 (247)
Q Consensus 153 ~~~~fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv~d~~ 191 (247)
+++||+||+++...+....++.+.+.|||||++++.+.
T Consensus 186 -d~~FDvV~~~a~~~d~~~~l~el~r~LkPGG~Lvv~~~ 223 (298)
T 3fpf_A 186 -GLEFDVLMVAALAEPKRRVFRNIHRYVDTETRIIYRTY 223 (298)
T ss_dssp -GCCCSEEEECTTCSCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred -CCCcCEEEECCCccCHHHHHHHHHHHcCCCcEEEEEcC
Confidence 37899999988877888999999999999999999874
No 21
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.70 E-value=2.5e-16 Score=126.70 Aligned_cols=119 Identities=17% Similarity=0.149 Sum_probs=100.5
Q ss_pred CHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhh
Q 025824 64 SADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPV 143 (247)
Q Consensus 64 ~~~~~~~l~~l~~~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~ 143 (247)
..+....+...+...+..+|||+|||+|..+..+++..+ .++|+++|+++++++.|+++++..++ ++++++.+|+.+.
T Consensus 25 ~~~i~~~~l~~l~~~~~~~vLDiG~G~G~~~~~la~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~ 102 (204)
T 3e05_A 25 KQEVRAVTLSKLRLQDDLVMWDIGAGSASVSIEASNLMP-NGRIFALERNPQYLGFIRDNLKKFVA-RNVTLVEAFAPEG 102 (204)
T ss_dssp CHHHHHHHHHHTTCCTTCEEEEETCTTCHHHHHHHHHCT-TSEEEEEECCHHHHHHHHHHHHHHTC-TTEEEEECCTTTT
T ss_pred hHHHHHHHHHHcCCCCCCEEEEECCCCCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEeCChhhh
Confidence 344444444445556778999999999999999999875 78999999999999999999999888 6899999999776
Q ss_pred hHHHHhhhcCCCceeEEEEcCCccchHHHHHHHHhcCCCCeEEEEecc
Q 025824 144 LDLLIQDEKNHGSFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYDNT 191 (247)
Q Consensus 144 l~~l~~~~~~~~~fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv~d~~ 191 (247)
++. .++||+||++........+++.+.+.|+|||.+++...
T Consensus 103 ~~~-------~~~~D~i~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 143 (204)
T 3e05_A 103 LDD-------LPDPDRVFIGGSGGMLEEIIDAVDRRLKSEGVIVLNAV 143 (204)
T ss_dssp CTT-------SCCCSEEEESCCTTCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred hhc-------CCCCCEEEECCCCcCHHHHHHHHHHhcCCCeEEEEEec
Confidence 543 36799999998766888999999999999999998644
No 22
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.70 E-value=4.2e-16 Score=126.58 Aligned_cols=168 Identities=15% Similarity=0.107 Sum_probs=115.3
Q ss_pred CHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCC----cEEEEEec
Q 025824 64 SADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAH----KIDFREGP 139 (247)
Q Consensus 64 ~~~~~~~l~~l~~~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~----~i~~~~gd 139 (247)
.+...+.+..++...++.+|||+|||+|..+..+++..+ ..+++++|+++.+++.|++++...++.+ +++++++|
T Consensus 14 ~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d 92 (219)
T 3jwg_A 14 NQQRLGTVVAVLKSVNAKKVIDLGCGEGNLLSLLLKDKS-FEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSS 92 (219)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEETCTTCHHHHHHHTSTT-CCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECC
T ss_pred hHHHHHHHHHHHhhcCCCEEEEecCCCCHHHHHHHhcCC-CCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCc
Confidence 355566666666667889999999999999999998765 5899999999999999999998877654 79999999
Q ss_pred chhhhHHHHhhhcCCCceeEEEEcCCc-----cchHHHHHHHHhcCCCCeEEEEecccccccccCC-CCCc--chhh-hc
Q 025824 140 ALPVLDLLIQDEKNHGSFDFIFVDADK-----DNYLNYHKRLIELVKVGGVIGYDNTLWNGSVVAP-PDAP--LRKY-VR 210 (247)
Q Consensus 140 ~~~~l~~l~~~~~~~~~fD~v~id~~~-----~~~~~~l~~~~~~L~~gG~lv~d~~~~~g~~~~~-~~~~--~~~~-~~ 210 (247)
+... +. ..++||+|++.... .....+++.+.+.|+|||+++.......+..... .... ...+ ..
T Consensus 93 ~~~~-~~------~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (219)
T 3jwg_A 93 LVYR-DK------RFSGYDAATVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVSTPNKEYNFHYGNLFEGNLRHRDHRFE 165 (219)
T ss_dssp SSSC-CG------GGTTCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBGGGGGCCCCT-----GGGCCTTS
T ss_pred cccc-cc------ccCCCCEEEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEccchhhhhhhcccCcccccccCceee
Confidence 8543 21 14789999976542 2335788999999999998886433222111100 0000 0000 11
Q ss_pred hHHHHHHHHHHHHHcCCCeeEEeeecCCe
Q 025824 211 YYRDFVLELNKALAADPRIEICMLPVGDG 239 (247)
Q Consensus 211 ~~~~~~~~~~~~i~~~~~~~~~~lp~~dG 239 (247)
.....++++.+.+...-+|...+.+++++
T Consensus 166 ~~~~~l~~~~~~l~~~~Gf~v~~~~~g~~ 194 (219)
T 3jwg_A 166 WTRKEFQTWAVKVAEKYGYSVRFLQIGEI 194 (219)
T ss_dssp BCHHHHHHHHHHHHHHHTEEEEEEEESCC
T ss_pred ecHHHHHHHHHHHHHHCCcEEEEEecCCc
Confidence 23345565555666666888888766544
No 23
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.69 E-value=4.8e-16 Score=123.63 Aligned_cols=106 Identities=12% Similarity=0.137 Sum_probs=89.7
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCce
Q 025824 78 VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSF 157 (247)
Q Consensus 78 ~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~f 157 (247)
.++.+|||+|||+|..++.+++. + ..+|+++|+++++++.|+++++..++ ++++++++|+.+.++.+ ..++|
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~-~-~~~v~~vD~~~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~-----~~~~f 114 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSR-G-AASVLFVESDQRSAAVIARNIEALGL-SGATLRRGAVAAVVAAG-----TTSPV 114 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT-T-CSEEEEEECCHHHHHHHHHHHHHHTC-SCEEEEESCHHHHHHHC-----CSSCC
T ss_pred CCCCEEEEeCCCcCHHHHHHHHC-C-CCeEEEEECCHHHHHHHHHHHHHcCC-CceEEEEccHHHHHhhc-----cCCCc
Confidence 56789999999999999987764 2 56899999999999999999999988 68999999998776543 25789
Q ss_pred eEEEEcCCcc----chHHHHHHHHh--cCCCCeEEEEecc
Q 025824 158 DFIFVDADKD----NYLNYHKRLIE--LVKVGGVIGYDNT 191 (247)
Q Consensus 158 D~v~id~~~~----~~~~~l~~~~~--~L~~gG~lv~d~~ 191 (247)
|+|+++.+.. .....+..+.+ +|+|||++++...
T Consensus 115 D~i~~~~p~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~ 154 (189)
T 3p9n_A 115 DLVLADPPYNVDSADVDAILAALGTNGWTREGTVAVVERA 154 (189)
T ss_dssp SEEEECCCTTSCHHHHHHHHHHHHHSSSCCTTCEEEEEEE
T ss_pred cEEEECCCCCcchhhHHHHHHHHHhcCccCCCeEEEEEec
Confidence 9999997733 36678888888 9999999998654
No 24
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.68 E-value=5.5e-16 Score=125.82 Aligned_cols=167 Identities=14% Similarity=0.142 Sum_probs=116.7
Q ss_pred HHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCC----cEEEEEecc
Q 025824 65 ADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAH----KIDFREGPA 140 (247)
Q Consensus 65 ~~~~~~l~~l~~~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~----~i~~~~gd~ 140 (247)
+...+.+...+...++.+|||+|||+|..+..+++..+ ..+++++|+++.+++.|++++...++.. +++++++|+
T Consensus 15 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~ 93 (217)
T 3jwh_A 15 QQRMNGVVAALKQSNARRVIDLGCGQGNLLKILLKDSF-FEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGAL 93 (217)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEETCTTCHHHHHHHHCTT-CSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCT
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCCCHHHHHHHhhCC-CCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCc
Confidence 45556666666667889999999999999999998754 5799999999999999999998877754 799999998
Q ss_pred hhhhHHHHhhhcCCCceeEEEEcCCc-----cchHHHHHHHHhcCCCCeEEEEecccccccccC-CCCCc--chhh-hch
Q 025824 141 LPVLDLLIQDEKNHGSFDFIFVDADK-----DNYLNYHKRLIELVKVGGVIGYDNTLWNGSVVA-PPDAP--LRKY-VRY 211 (247)
Q Consensus 141 ~~~l~~l~~~~~~~~~fD~v~id~~~-----~~~~~~l~~~~~~L~~gG~lv~d~~~~~g~~~~-~~~~~--~~~~-~~~ 211 (247)
... +. ..++||+|++.... .....+++.+.+.|+|||++++......+.... ..... ...+ ...
T Consensus 94 ~~~-~~------~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (217)
T 3jwh_A 94 TYQ-DK------RFHGYDAATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTPNIEYNVKFANLPAGKLRHKDHRFEW 166 (217)
T ss_dssp TSC-CG------GGCSCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBHHHHHHTC-----------CCSCB
T ss_pred ccc-cc------cCCCcCEEeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEccCcccchhhccccccccccccccccc
Confidence 533 21 14689999987652 234678999999999999888754321111110 00000 0000 112
Q ss_pred HHHHHHHHHHHHHcCCCeeEEeeecCCe
Q 025824 212 YRDFVLELNKALAADPRIEICMLPVGDG 239 (247)
Q Consensus 212 ~~~~~~~~~~~i~~~~~~~~~~lp~~dG 239 (247)
....++++.+.+.+..+|...+.++|+.
T Consensus 167 ~~~~l~~~~~~~~~~~Gf~v~~~~~g~~ 194 (217)
T 3jwh_A 167 TRSQFQNWANKITERFAYNVQFQPIGEA 194 (217)
T ss_dssp CHHHHHHHHHHHHHHSSEEEEECCCSCC
T ss_pred CHHHHHHHHHHHHHHcCceEEEEecCCc
Confidence 3445666666677777899988887754
No 25
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.68 E-value=5.3e-16 Score=130.03 Aligned_cols=116 Identities=15% Similarity=0.207 Sum_probs=93.3
Q ss_pred HHHHHHHHh--hcCCCEEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhh
Q 025824 68 GQFLNMLLK--LVNAKNTMEIGVYTGYSLLATALALP-DDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVL 144 (247)
Q Consensus 68 ~~~l~~l~~--~~~~~~vLEiG~g~G~st~~la~~~~-~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l 144 (247)
-+++..++. ..+..+|||+|||+|..+..+++.++ ++++|+++|+++.+++.|++++...+...+++++++|+.+.
T Consensus 57 ~~~i~~l~~~~~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~- 135 (261)
T 4gek_A 57 ISMIGMLAERFVQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDI- 135 (261)
T ss_dssp HHHHHHHHHHHCCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTC-
T ss_pred HHHHHHHHHHhCCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccc-
Confidence 334444443 24567999999999999999998864 46799999999999999999999988888999999998764
Q ss_pred HHHHhhhcCCCceeEEEEcCC-----ccchHHHHHHHHhcCCCCeEEEEeccc
Q 025824 145 DLLIQDEKNHGSFDFIFVDAD-----KDNYLNYHKRLIELVKVGGVIGYDNTL 192 (247)
Q Consensus 145 ~~l~~~~~~~~~fD~v~id~~-----~~~~~~~l~~~~~~L~~gG~lv~d~~~ 192 (247)
+ .++||+|++... .......++.+.+.|+|||++++.+..
T Consensus 136 ~--------~~~~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~ 180 (261)
T 4gek_A 136 A--------IENASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEKF 180 (261)
T ss_dssp C--------CCSEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred c--------ccccccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEecc
Confidence 2 467999987654 223456899999999999999986544
No 26
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.68 E-value=9.7e-16 Score=123.74 Aligned_cols=115 Identities=17% Similarity=0.134 Sum_probs=95.8
Q ss_pred HHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhh
Q 025824 65 ADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVL 144 (247)
Q Consensus 65 ~~~~~~l~~l~~~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l 144 (247)
+.....+...+...+..+|||+|||+|..++.+++. +++|+++|+++++++.|+++++..++.++++++++|+.+.+
T Consensus 41 ~~~~~~~l~~l~~~~~~~vLDlGcG~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~ 117 (204)
T 3njr_A 41 SPMRALTLAALAPRRGELLWDIGGGSGSVSVEWCLA---GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAAL 117 (204)
T ss_dssp HHHHHHHHHHHCCCTTCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGG
T ss_pred HHHHHHHHHhcCCCCCCEEEEecCCCCHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhc
Confidence 444445555555667789999999999999999987 67999999999999999999999998768999999998755
Q ss_pred HHHHhhhcCCCceeEEEEcCCccchHHHHHHHHhcCCCCeEEEEecc
Q 025824 145 DLLIQDEKNHGSFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYDNT 191 (247)
Q Consensus 145 ~~l~~~~~~~~~fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv~d~~ 191 (247)
+. .++||+||++... ... +++.+.+.|+|||.+++...
T Consensus 118 ~~-------~~~~D~v~~~~~~-~~~-~l~~~~~~LkpgG~lv~~~~ 155 (204)
T 3njr_A 118 AD-------LPLPEAVFIGGGG-SQA-LYDRLWEWLAPGTRIVANAV 155 (204)
T ss_dssp TT-------SCCCSEEEECSCC-CHH-HHHHHHHHSCTTCEEEEEEC
T ss_pred cc-------CCCCCEEEECCcc-cHH-HHHHHHHhcCCCcEEEEEec
Confidence 43 3589999998753 344 89999999999999998654
No 27
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.67 E-value=4.9e-16 Score=121.79 Aligned_cols=109 Identities=18% Similarity=0.169 Sum_probs=91.5
Q ss_pred HHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcC
Q 025824 74 LLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKN 153 (247)
Q Consensus 74 l~~~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~ 153 (247)
.+...+..+|||+|||+|..+..+++..+ +++++++|+++++++.|++++...++.+++ ++.+|+.+.++..
T Consensus 20 ~~~~~~~~~vldiG~G~G~~~~~l~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~~~~------ 91 (178)
T 3hm2_A 20 ALAPKPHETLWDIGGGSGSIAIEWLRSTP-QTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAFDDV------ 91 (178)
T ss_dssp HHCCCTTEEEEEESTTTTHHHHHHHTTSS-SEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGGGGC------
T ss_pred HhcccCCCeEEEeCCCCCHHHHHHHHHCC-CCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhhhcc------
Confidence 33445567999999999999999999875 789999999999999999999999987689 8889987665532
Q ss_pred CCceeEEEEcCCccchHHHHHHHHhcCCCCeEEEEecc
Q 025824 154 HGSFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYDNT 191 (247)
Q Consensus 154 ~~~fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv~d~~ 191 (247)
.++||+|++...... ..+++.+.+.|+|||.+++...
T Consensus 92 ~~~~D~i~~~~~~~~-~~~l~~~~~~L~~gG~l~~~~~ 128 (178)
T 3hm2_A 92 PDNPDVIFIGGGLTA-PGVFAAAWKRLPVGGRLVANAV 128 (178)
T ss_dssp CSCCSEEEECC-TTC-TTHHHHHHHTCCTTCEEEEEEC
T ss_pred CCCCCEEEECCcccH-HHHHHHHHHhcCCCCEEEEEee
Confidence 378999999876544 7789999999999999998654
No 28
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.67 E-value=4.2e-16 Score=134.05 Aligned_cols=151 Identities=15% Similarity=0.129 Sum_probs=108.9
Q ss_pred hcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHH--cC-C-CCcEEEEEecchhhhHHHHhhhc
Q 025824 77 LVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQK--AG-V-AHKIDFREGPALPVLDLLIQDEK 152 (247)
Q Consensus 77 ~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~--~g-~-~~~i~~~~gd~~~~l~~l~~~~~ 152 (247)
..++++|||||||+|..+..+++..+ ..+|+++|+++.+++.|++++.. .+ + .++++++.+|+.+.++..
T Consensus 75 ~~~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~----- 148 (314)
T 1uir_A 75 HPEPKRVLIVGGGEGATLREVLKHPT-VEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERT----- 148 (314)
T ss_dssp SSCCCEEEEEECTTSHHHHHHTTSTT-CCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHC-----
T ss_pred CCCCCeEEEEcCCcCHHHHHHHhcCC-CCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhc-----
Confidence 45778999999999999999998654 68999999999999999999875 22 2 368999999998876542
Q ss_pred CCCceeEEEEcCCccc----------hHHHHHHHHhcCCCCeEEEEecccccccccCCCCCcchhhhchHHHHHHHHHHH
Q 025824 153 NHGSFDFIFVDADKDN----------YLNYHKRLIELVKVGGVIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKA 222 (247)
Q Consensus 153 ~~~~fD~v~id~~~~~----------~~~~l~~~~~~L~~gG~lv~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (247)
.++||+|++|..... ...+++.+.+.|+|||++++.. +...... ......+....+.
T Consensus 149 -~~~fD~Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~----~~~~~~~--------~~~~~~~~~~l~~ 215 (314)
T 1uir_A 149 -EERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQT----GMILLTH--------HRVHPVVHRTVRE 215 (314)
T ss_dssp -CCCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEE----EEECC-----------CHHHHHHHHHHT
T ss_pred -CCCccEEEECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEc----cCccccC--------HHHHHHHHHHHHH
Confidence 578999999976433 4789999999999999999852 1111000 1122333444444
Q ss_pred HHcCCCeeEEeeecCCe---eEEEEEc
Q 025824 223 LAADPRIEICMLPVGDG---VTICRRI 246 (247)
Q Consensus 223 i~~~~~~~~~~lp~~dG---~~i~~k~ 246 (247)
+..+..+....+|..+| +.++.|.
T Consensus 216 ~F~~v~~~~~~vP~~~g~~~~~~as~~ 242 (314)
T 1uir_A 216 AFRYVRSYKNHIPGFFLNFGFLLASDA 242 (314)
T ss_dssp TCSEEEEEEEEEGGGTEEEEEEEEESS
T ss_pred HCCceEEEEEecCCCCCeEEEEEEECC
Confidence 44444455667787665 6677653
No 29
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.67 E-value=3.1e-16 Score=123.20 Aligned_cols=107 Identities=14% Similarity=0.178 Sum_probs=90.1
Q ss_pred hcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCc
Q 025824 77 LVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGS 156 (247)
Q Consensus 77 ~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~ 156 (247)
..++.+|||+|||+|..+..+++. + ..+|+++|+++++++.|+++++..++.++++++.+|+.+.++.. .++
T Consensus 29 ~~~~~~vLDlGcG~G~~~~~l~~~-~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~------~~~ 100 (177)
T 2esr_A 29 YFNGGRVLDLFAGSGGLAIEAVSR-G-MSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCL------TGR 100 (177)
T ss_dssp CCCSCEEEEETCTTCHHHHHHHHT-T-CCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHB------CSC
T ss_pred hcCCCeEEEeCCCCCHHHHHHHHc-C-CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhh------cCC
Confidence 456789999999999999999876 3 57999999999999999999999888778999999998766543 467
Q ss_pred eeEEEEcCCc--cchHHHHHHHH--hcCCCCeEEEEecc
Q 025824 157 FDFIFVDADK--DNYLNYHKRLI--ELVKVGGVIGYDNT 191 (247)
Q Consensus 157 fD~v~id~~~--~~~~~~l~~~~--~~L~~gG~lv~d~~ 191 (247)
||+|+++.+. ......++.+. +.|+|||++++...
T Consensus 101 fD~i~~~~~~~~~~~~~~~~~l~~~~~L~~gG~l~~~~~ 139 (177)
T 2esr_A 101 FDLVFLDPPYAKETIVATIEALAAKNLLSEQVMVVCETD 139 (177)
T ss_dssp EEEEEECCSSHHHHHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred CCEEEECCCCCcchHHHHHHHHHhCCCcCCCcEEEEEEC
Confidence 9999999763 44566777776 89999999998643
No 30
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.67 E-value=6.4e-16 Score=130.91 Aligned_cols=147 Identities=12% Similarity=0.066 Sum_probs=107.6
Q ss_pred hcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHc--CC--------CCcEEEEEecchhhhHH
Q 025824 77 LVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKA--GV--------AHKIDFREGPALPVLDL 146 (247)
Q Consensus 77 ~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~--g~--------~~~i~~~~gd~~~~l~~ 146 (247)
..++++|||||||+|..+..+++. + ..+|+++|+++++++.|++++ .. ++ .++++++.+|+.+.++.
T Consensus 73 ~~~~~~VLdiG~G~G~~~~~l~~~-~-~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~ 149 (281)
T 1mjf_A 73 HPKPKRVLVIGGGDGGTVREVLQH-D-VDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN 149 (281)
T ss_dssp SSCCCEEEEEECTTSHHHHHHTTS-C-CSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHH
T ss_pred CCCCCeEEEEcCCcCHHHHHHHhC-C-CCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcc
Confidence 456789999999999999999987 5 789999999999999999998 44 32 46899999999876653
Q ss_pred HHhhhcCCCceeEEEEcCCc-----cc--hHHHHHHHHhcCCCCeEEEEecccccccccCCCCCcchhhhchHHHHHHHH
Q 025824 147 LIQDEKNHGSFDFIFVDADK-----DN--YLNYHKRLIELVKVGGVIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLEL 219 (247)
Q Consensus 147 l~~~~~~~~~fD~v~id~~~-----~~--~~~~l~~~~~~L~~gG~lv~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 219 (247)
.++||+|++|... .. ...+++.+.+.|+|||+++++.. .... . ......+.+.
T Consensus 150 -------~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~----~~~~--~-------~~~~~~~~~~ 209 (281)
T 1mjf_A 150 -------NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQAG----SVYL--F-------TDELISAYKE 209 (281)
T ss_dssp -------CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEEE----ETTT--S-------HHHHHHHHHH
T ss_pred -------cCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcC----Cccc--C-------HHHHHHHHHH
Confidence 3689999999862 11 37789999999999999998621 1110 0 1223344444
Q ss_pred HHHHHcCCCeeEEeeecCCe---eEEEEEc
Q 025824 220 NKALAADPRIEICMLPVGDG---VTICRRI 246 (247)
Q Consensus 220 ~~~i~~~~~~~~~~lp~~dG---~~i~~k~ 246 (247)
.+.+..+..+....+|..+| +.++.|.
T Consensus 210 l~~~f~~v~~~~~~vP~~~g~~~~~~as~~ 239 (281)
T 1mjf_A 210 MKKVFDRVYYYSFPVIGYASPWAFLVGVKG 239 (281)
T ss_dssp HHHHCSEEEEEEECCTTSSSSEEEEEEEES
T ss_pred HHHHCCceEEEEEecCCCCceEEEEEeeCC
Confidence 44444444555666787654 7778764
No 31
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.66 E-value=4.8e-16 Score=134.63 Aligned_cols=111 Identities=20% Similarity=0.321 Sum_probs=91.2
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHc--CC-CCcEEEEEecchhhhHHHHhhhcCC
Q 025824 78 VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKA--GV-AHKIDFREGPALPVLDLLIQDEKNH 154 (247)
Q Consensus 78 ~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~--g~-~~~i~~~~gd~~~~l~~l~~~~~~~ 154 (247)
.++++|||||||+|..+..+++..+ ..+|+++|+++.+++.|++++... ++ ..+++++++|+.+.++.+ ..
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~~~-~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~-----~~ 192 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARHAS-IEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNA-----AE 192 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCTT-CCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTS-----CT
T ss_pred CCCCEEEEECCCccHHHHHHHHcCC-CCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhc-----cC
Confidence 5678999999999999999998654 689999999999999999998753 44 358999999998876543 14
Q ss_pred CceeEEEEcCCc-----cc--hHHHHHHHHhcCCCCeEEEEe-ccccc
Q 025824 155 GSFDFIFVDADK-----DN--YLNYHKRLIELVKVGGVIGYD-NTLWN 194 (247)
Q Consensus 155 ~~fD~v~id~~~-----~~--~~~~l~~~~~~L~~gG~lv~d-~~~~~ 194 (247)
++||+|++|... .. +..+++.+.+.|+|||+++++ +..|.
T Consensus 193 ~~fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~ 240 (334)
T 1xj5_A 193 GSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQAESLWL 240 (334)
T ss_dssp TCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEECCCTTT
T ss_pred CCccEEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEecCCccc
Confidence 689999998751 11 478999999999999999996 55554
No 32
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.65 E-value=1.2e-16 Score=131.95 Aligned_cols=112 Identities=19% Similarity=0.159 Sum_probs=91.6
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCce
Q 025824 78 VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSF 157 (247)
Q Consensus 78 ~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~f 157 (247)
.++.+|||||||+|.++.++++..+ .++++||+++++++.|+++....+. +++++.+++.+.+..+ .+++|
T Consensus 59 ~~G~rVLdiG~G~G~~~~~~~~~~~--~~v~~id~~~~~~~~a~~~~~~~~~--~~~~~~~~a~~~~~~~-----~~~~F 129 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASKVQEAPI--DEHWIIECNDGVFQRLRDWAPRQTH--KVIPLKGLWEDVAPTL-----PDGHF 129 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHTTSCE--EEEEEEECCHHHHHHHHHHGGGCSS--EEEEEESCHHHHGGGS-----CTTCE
T ss_pred cCCCeEEEECCCccHHHHHHHHhCC--cEEEEEeCCHHHHHHHHHHHhhCCC--ceEEEeehHHhhcccc-----cccCC
Confidence 4567999999999999999987654 5899999999999999999887664 7899999998776655 36789
Q ss_pred eEEEEcCCc--------cchHHHHHHHHhcCCCCeEEEEeccccccccc
Q 025824 158 DFIFVDADK--------DNYLNYHKRLIELVKVGGVIGYDNTLWNGSVV 198 (247)
Q Consensus 158 D~v~id~~~--------~~~~~~l~~~~~~L~~gG~lv~d~~~~~g~~~ 198 (247)
|.|+.|... .....+++.+.++|||||++++.|....|...
T Consensus 130 D~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~~~~~~~~~ 178 (236)
T 3orh_A 130 DGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLTSWGELM 178 (236)
T ss_dssp EEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHHHHHHHT
T ss_pred ceEEEeeeecccchhhhcchhhhhhhhhheeCCCCEEEEEecCCchhhh
Confidence 999998652 23457888999999999999998876555433
No 33
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.64 E-value=2.2e-15 Score=124.41 Aligned_cols=105 Identities=13% Similarity=0.120 Sum_probs=88.3
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCce
Q 025824 78 VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSF 157 (247)
Q Consensus 78 ~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~f 157 (247)
.++.+|||+|||+|..++.++...+ +++|+++|+++++++.|+++++..++. +++++++|+.+...... ..++|
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~----~~~~f 142 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFP-HLHVTIVDSLNKRITFLEKLSEALQLE-NTTFCHDRAETFGQRKD----VRESY 142 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCT-TCEEEEEESCHHHHHHHHHHHHHHTCS-SEEEEESCHHHHTTCTT----TTTCE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHHcCCC-CEEEEeccHHHhccccc----ccCCc
Confidence 3678999999999999999998655 789999999999999999999999885 59999999876431000 13689
Q ss_pred eEEEEcCCccchHHHHHHHHhcCCCCeEEEEe
Q 025824 158 DFIFVDADKDNYLNYHKRLIELVKVGGVIGYD 189 (247)
Q Consensus 158 D~v~id~~~~~~~~~l~~~~~~L~~gG~lv~d 189 (247)
|+|++++. ..+..+++.+.++|+|||++++.
T Consensus 143 D~V~~~~~-~~~~~~l~~~~~~LkpgG~l~~~ 173 (240)
T 1xdz_A 143 DIVTARAV-ARLSVLSELCLPLVKKNGLFVAL 173 (240)
T ss_dssp EEEEEECC-SCHHHHHHHHGGGEEEEEEEEEE
T ss_pred cEEEEecc-CCHHHHHHHHHHhcCCCCEEEEE
Confidence 99999874 56788999999999999999874
No 34
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.64 E-value=1.8e-15 Score=136.05 Aligned_cols=120 Identities=16% Similarity=0.239 Sum_probs=99.6
Q ss_pred cCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchh
Q 025824 63 TSADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALP 142 (247)
Q Consensus 63 ~~~~~~~~l~~l~~~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~ 142 (247)
+......++..++...++.+|||+|||+|..|+.+++.++..++|+++|+++.+++.+++++++.|+. ++++++|+.+
T Consensus 85 vQd~ss~l~a~~L~~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~--v~~~~~Da~~ 162 (464)
T 3m6w_A 85 IQEPSAQAVGVLLDPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP--LAVTQAPPRA 162 (464)
T ss_dssp ECCTTTHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC--CEEECSCHHH
T ss_pred EECHHHHHHHHhcCcCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe--EEEEECCHHH
Confidence 44555667777777777889999999999999999999876689999999999999999999999985 9999999977
Q ss_pred hhHHHHhhhcCCCceeEEEEcCCccc-------------------------hHHHHHHHHhcCCCCeEEEEec
Q 025824 143 VLDLLIQDEKNHGSFDFIFVDADKDN-------------------------YLNYHKRLIELVKVGGVIGYDN 190 (247)
Q Consensus 143 ~l~~l~~~~~~~~~fD~v~id~~~~~-------------------------~~~~l~~~~~~L~~gG~lv~d~ 190 (247)
..... .++||+|++|+++.. ...+++.+.++|+|||+|+...
T Consensus 163 l~~~~------~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysT 229 (464)
T 3m6w_A 163 LAEAF------GTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYST 229 (464)
T ss_dssp HHHHH------CSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred hhhhc------cccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 54333 578999999977421 1567888889999999999643
No 35
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.64 E-value=3.1e-15 Score=124.12 Aligned_cols=120 Identities=14% Similarity=0.187 Sum_probs=97.3
Q ss_pred HHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhh
Q 025824 65 ADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVL 144 (247)
Q Consensus 65 ~~~~~~l~~l~~~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l 144 (247)
+.....+...+...+..+|||||||+|..+..+++.. +.+++++|+++.+++.|++++...|+.++++++++|+.+..
T Consensus 22 ~~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~ 99 (256)
T 1nkv_A 22 EEKYATLGRVLRMKPGTRILDLGSGSGEMLCTWARDH--GITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYV 99 (256)
T ss_dssp HHHHHHHHHHTCCCTTCEEEEETCTTCHHHHHHHHHT--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCC
T ss_pred HHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc--CCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCC
Confidence 4444444444455567899999999999999999876 47999999999999999999999998778999999997653
Q ss_pred HHHHhhhcCCCceeEEEEcCC---ccchHHHHHHHHhcCCCCeEEEEeccccc
Q 025824 145 DLLIQDEKNHGSFDFIFVDAD---KDNYLNYHKRLIELVKVGGVIGYDNTLWN 194 (247)
Q Consensus 145 ~~l~~~~~~~~~fD~v~id~~---~~~~~~~l~~~~~~L~~gG~lv~d~~~~~ 194 (247)
. .++||+|++... ..+....++.+.+.|+|||.+++.+..|.
T Consensus 100 ~--------~~~fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~ 144 (256)
T 1nkv_A 100 A--------NEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGEPYWR 144 (256)
T ss_dssp C--------SSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEEEEET
T ss_pred c--------CCCCCEEEECCChHhcCCHHHHHHHHHHHcCCCeEEEEecCccc
Confidence 2 368999997544 23567889999999999999999765543
No 36
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.63 E-value=1.6e-15 Score=122.07 Aligned_cols=115 Identities=12% Similarity=0.122 Sum_probs=90.2
Q ss_pred HHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCC-CcEEEEEecchhhhHHHH
Q 025824 70 FLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVA-HKIDFREGPALPVLDLLI 148 (247)
Q Consensus 70 ~l~~l~~~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~-~~i~~~~gd~~~~l~~l~ 148 (247)
++..+....+..+|||+|||+|..++.++... ..+|+++|+++++++.|++++...++. ++++++++|+.+.++.+
T Consensus 44 l~~~l~~~~~~~~vLDlGcGtG~~~~~~~~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~- 120 (201)
T 2ift_A 44 LFNWLMPYIHQSECLDGFAGSGSLGFEALSRQ--AKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQP- 120 (201)
T ss_dssp HHHHHHHHHTTCEEEETTCTTCHHHHHHHHTT--CSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSC-
T ss_pred HHHHHHHhcCCCeEEEcCCccCHHHHHHHHcc--CCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhh-
Confidence 33333333367899999999999999877652 369999999999999999999998875 68999999997765432
Q ss_pred hhhcCCCc-eeEEEEcCC--ccchHHHHHHH--HhcCCCCeEEEEecc
Q 025824 149 QDEKNHGS-FDFIFVDAD--KDNYLNYHKRL--IELVKVGGVIGYDNT 191 (247)
Q Consensus 149 ~~~~~~~~-fD~v~id~~--~~~~~~~l~~~--~~~L~~gG~lv~d~~ 191 (247)
..++ ||+|++|.+ .......++.+ .++|+|||++++...
T Consensus 121 ----~~~~~fD~I~~~~~~~~~~~~~~l~~~~~~~~LkpgG~l~i~~~ 164 (201)
T 2ift_A 121 ----QNQPHFDVVFLDPPFHFNLAEQAISLLCENNWLKPNALIYVETE 164 (201)
T ss_dssp ----CSSCCEEEEEECCCSSSCHHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred ----ccCCCCCEEEECCCCCCccHHHHHHHHHhcCccCCCcEEEEEEC
Confidence 1367 999999987 34556777777 568999999998644
No 37
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.63 E-value=2.6e-15 Score=118.60 Aligned_cols=108 Identities=14% Similarity=0.173 Sum_probs=89.0
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCce
Q 025824 78 VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSF 157 (247)
Q Consensus 78 ~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~f 157 (247)
.+..+|||+|||+|..+..+++. + ..+|+++|+++.+++.|++++...++.++++++++|+.+.++.+.. ..++|
T Consensus 43 ~~~~~vLD~GcG~G~~~~~~~~~-~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~---~~~~f 117 (187)
T 2fhp_A 43 FDGGMALDLYSGSGGLAIEAVSR-G-MDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYE---EKLQF 117 (187)
T ss_dssp CSSCEEEETTCTTCHHHHHHHHT-T-CSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHH---TTCCE
T ss_pred cCCCCEEEeCCccCHHHHHHHHc-C-CCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHh---cCCCC
Confidence 46789999999999999988873 2 5799999999999999999999988877899999999886654321 14689
Q ss_pred eEEEEcCC--ccchHHHHHHH--HhcCCCCeEEEEec
Q 025824 158 DFIFVDAD--KDNYLNYHKRL--IELVKVGGVIGYDN 190 (247)
Q Consensus 158 D~v~id~~--~~~~~~~l~~~--~~~L~~gG~lv~d~ 190 (247)
|+|+++.+ .......+..+ .++|+|||++++..
T Consensus 118 D~i~~~~~~~~~~~~~~~~~l~~~~~L~~gG~l~~~~ 154 (187)
T 2fhp_A 118 DLVLLDPPYAKQEIVSQLEKMLERQLLTNEAVIVCET 154 (187)
T ss_dssp EEEEECCCGGGCCHHHHHHHHHHTTCEEEEEEEEEEE
T ss_pred CEEEECCCCCchhHHHHHHHHHHhcccCCCCEEEEEe
Confidence 99999977 34456677777 78899999999853
No 38
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.63 E-value=2.3e-15 Score=125.05 Aligned_cols=116 Identities=15% Similarity=0.202 Sum_probs=98.9
Q ss_pred CHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhh
Q 025824 64 SADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPV 143 (247)
Q Consensus 64 ~~~~~~~l~~l~~~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~ 143 (247)
.+.....+...+...++.+|||+|||+|..+..+++.+.++++++++|+++++++.|+++++..++.++++++++|+.+.
T Consensus 78 ~~~~~~~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 157 (255)
T 3mb5_A 78 HPKDAALIVAYAGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEG 157 (255)
T ss_dssp CHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGC
T ss_pred cHhHHHHHHHhhCCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhc
Confidence 35666666666666778899999999999999999985558999999999999999999999999887899999999865
Q ss_pred hHHHHhhhcCCCceeEEEEcCCccchHHHHHHHHhcCCCCeEEEEe
Q 025824 144 LDLLIQDEKNHGSFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYD 189 (247)
Q Consensus 144 l~~l~~~~~~~~~fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv~d 189 (247)
++ .++||+|++|.+ ....+++.+.+.|+|||.+++.
T Consensus 158 ~~--------~~~~D~v~~~~~--~~~~~l~~~~~~L~~gG~l~~~ 193 (255)
T 3mb5_A 158 IE--------EENVDHVILDLP--QPERVVEHAAKALKPGGFFVAY 193 (255)
T ss_dssp CC--------CCSEEEEEECSS--CGGGGHHHHHHHEEEEEEEEEE
T ss_pred cC--------CCCcCEEEECCC--CHHHHHHHHHHHcCCCCEEEEE
Confidence 43 568999999765 3456789999999999999975
No 39
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.63 E-value=2.3e-15 Score=135.07 Aligned_cols=121 Identities=15% Similarity=0.174 Sum_probs=99.7
Q ss_pred cCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchh
Q 025824 63 TSADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALP 142 (247)
Q Consensus 63 ~~~~~~~~l~~l~~~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~ 142 (247)
+......++..++...++.+|||+|||+|..|+.+++.++..++|+++|+++.+++.+++|+++.|+. ++.++++|+.+
T Consensus 89 vQd~ss~l~~~~L~~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~-nv~v~~~Da~~ 167 (456)
T 3m4x_A 89 SQEPSAMIVGTAAAAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVS-NAIVTNHAPAE 167 (456)
T ss_dssp ECCTTTHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCS-SEEEECCCHHH
T ss_pred EECHHHHHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-ceEEEeCCHHH
Confidence 34555667777777777889999999999999999998876789999999999999999999999985 69999999977
Q ss_pred hhHHHHhhhcCCCceeEEEEcCCccc-------------------------hHHHHHHHHhcCCCCeEEEEec
Q 025824 143 VLDLLIQDEKNHGSFDFIFVDADKDN-------------------------YLNYHKRLIELVKVGGVIGYDN 190 (247)
Q Consensus 143 ~l~~l~~~~~~~~~fD~v~id~~~~~-------------------------~~~~l~~~~~~L~~gG~lv~d~ 190 (247)
....+ .++||.|++|+++.. ...+++.+.++|+|||.|+...
T Consensus 168 l~~~~------~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsT 234 (456)
T 3m4x_A 168 LVPHF------SGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYST 234 (456)
T ss_dssp HHHHH------TTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred hhhhc------cccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 64433 578999999987311 1266788889999999999643
No 40
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.62 E-value=5e-15 Score=119.47 Aligned_cols=105 Identities=20% Similarity=0.265 Sum_probs=89.7
Q ss_pred CCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCceeE
Q 025824 80 AKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDF 159 (247)
Q Consensus 80 ~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~fD~ 159 (247)
+.+|||+|||+|..+..+++. + +.+++++|+++.+++.|++++...++.++++++++|+.+.. + ..++||+
T Consensus 44 ~~~vLdiG~G~G~~~~~l~~~-~-~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~--~-----~~~~~D~ 114 (219)
T 3dlc_A 44 AGTCIDIGSGPGALSIALAKQ-S-DFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIP--I-----EDNYADL 114 (219)
T ss_dssp EEEEEEETCTTSHHHHHHHHH-S-EEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCS--S-----CTTCEEE
T ss_pred CCEEEEECCCCCHHHHHHHHc-C-CCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCC--C-----CcccccE
Confidence 349999999999999999987 4 68999999999999999999999998889999999997642 1 2578999
Q ss_pred EEEcCC---ccchHHHHHHHHhcCCCCeEEEEecccc
Q 025824 160 IFVDAD---KDNYLNYHKRLIELVKVGGVIGYDNTLW 193 (247)
Q Consensus 160 v~id~~---~~~~~~~l~~~~~~L~~gG~lv~d~~~~ 193 (247)
|++... ..+....++.+.+.|+|||.+++.+...
T Consensus 115 v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 151 (219)
T 3dlc_A 115 IVSRGSVFFWEDVATAFREIYRILKSGGKTYIGGGFG 151 (219)
T ss_dssp EEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEECCS
T ss_pred EEECchHhhccCHHHHHHHHHHhCCCCCEEEEEeccC
Confidence 998765 2455789999999999999999876543
No 41
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.62 E-value=2.6e-15 Score=126.75 Aligned_cols=105 Identities=13% Similarity=0.164 Sum_probs=87.9
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHc--CC-CCcEEEEEecchhhhHHHHhhhcCC
Q 025824 78 VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKA--GV-AHKIDFREGPALPVLDLLIQDEKNH 154 (247)
Q Consensus 78 ~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~--g~-~~~i~~~~gd~~~~l~~l~~~~~~~ 154 (247)
.++++|||||||+|..+..+++..+ ..+|+++|+++++++.|++++... ++ .++++++.+|+.+.++.. .
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~------~ 146 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIREILKHPS-VKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKS------E 146 (275)
T ss_dssp SSCCEEEEESCTTCHHHHHHTTCTT-CSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTC------C
T ss_pred CCCCEEEEECCchHHHHHHHHhCCC-CceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhC------C
Confidence 4688999999999999999987643 689999999999999999998652 33 368999999998876642 5
Q ss_pred CceeEEEEcCCccc-------hHHHHHHHHhcCCCCeEEEEe
Q 025824 155 GSFDFIFVDADKDN-------YLNYHKRLIELVKVGGVIGYD 189 (247)
Q Consensus 155 ~~fD~v~id~~~~~-------~~~~l~~~~~~L~~gG~lv~d 189 (247)
++||+|++|..... ..++++.+.+.|+|||++++.
T Consensus 147 ~~fD~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~ 188 (275)
T 1iy9_A 147 NQYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQ 188 (275)
T ss_dssp SCEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEE
T ss_pred CCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 78999999976321 267899999999999999986
No 42
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.62 E-value=2.7e-15 Score=125.52 Aligned_cols=109 Identities=15% Similarity=0.210 Sum_probs=92.8
Q ss_pred hcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCc
Q 025824 77 LVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGS 156 (247)
Q Consensus 77 ~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~ 156 (247)
..++.+|||||||+|..+..+++. + .++|+++|+++.+++.|++++...++.++++++++|+.+.. + ..++
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~-~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--~-----~~~~ 114 (267)
T 3kkz_A 44 LTEKSLIADIGCGTGGQTMVLAGH-V-TGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLP--F-----RNEE 114 (267)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHTT-C-SSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC--C-----CTTC
T ss_pred CCCCCEEEEeCCCCCHHHHHHHhc-c-CCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCC--C-----CCCC
Confidence 345789999999999999999987 3 67999999999999999999999999889999999996642 1 2578
Q ss_pred eeEEEEcCC--ccchHHHHHHHHhcCCCCeEEEEeccccc
Q 025824 157 FDFIFVDAD--KDNYLNYHKRLIELVKVGGVIGYDNTLWN 194 (247)
Q Consensus 157 fD~v~id~~--~~~~~~~l~~~~~~L~~gG~lv~d~~~~~ 194 (247)
||+|++... .-+...+++.+.+.|+|||++++.+..|.
T Consensus 115 fD~i~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 154 (267)
T 3kkz_A 115 LDLIWSEGAIYNIGFERGLNEWRKYLKKGGYLAVSECSWF 154 (267)
T ss_dssp EEEEEESSCGGGTCHHHHHHHHGGGEEEEEEEEEEEEEES
T ss_pred EEEEEEcCCceecCHHHHHHHHHHHcCCCCEEEEEEeeec
Confidence 999998765 22567889999999999999999876543
No 43
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.62 E-value=2.1e-15 Score=120.43 Aligned_cols=107 Identities=9% Similarity=0.170 Sum_probs=90.1
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCce
Q 025824 78 VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSF 157 (247)
Q Consensus 78 ~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~f 157 (247)
.+..+|||+|||+|..+..+++.+++.++++++|+++++++.|++++...++.++++++++|+.+..... .++|
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~------~~~f 94 (197)
T 3eey_A 21 KEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYI------DCPV 94 (197)
T ss_dssp CTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTC------CSCE
T ss_pred CCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhc------cCCc
Confidence 4567999999999999999999875578999999999999999999999988778999999987654322 5789
Q ss_pred eEEEEcCCc------------cchHHHHHHHHhcCCCCeEEEEec
Q 025824 158 DFIFVDADK------------DNYLNYHKRLIELVKVGGVIGYDN 190 (247)
Q Consensus 158 D~v~id~~~------------~~~~~~l~~~~~~L~~gG~lv~d~ 190 (247)
|+|+++... .....+++.+.+.|+|||.+++..
T Consensus 95 D~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~ 139 (197)
T 3eey_A 95 KAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVI 139 (197)
T ss_dssp EEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEE
Confidence 999988632 134578999999999999999753
No 44
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.62 E-value=1.6e-15 Score=120.01 Aligned_cols=102 Identities=11% Similarity=0.132 Sum_probs=83.4
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCce
Q 025824 78 VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSF 157 (247)
Q Consensus 78 ~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~f 157 (247)
.+..+|||+|||+|..+..+++. +++|+++|+++++++.|+++++..++ +++++++++..+. ..+ ..++|
T Consensus 21 ~~~~~vLDiGcG~G~~~~~la~~---~~~v~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~~~~~l-~~~-----~~~~f 90 (185)
T 3mti_A 21 DDESIVVDATMGNGNDTAFLAGL---SKKVYAFDVQEQALGKTSQRLSDLGI-ENTELILDGHENL-DHY-----VREPI 90 (185)
T ss_dssp CTTCEEEESCCTTSHHHHHHHTT---SSEEEEEESCHHHHHHHHHHHHHHTC-CCEEEEESCGGGG-GGT-----CCSCE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcCC-CcEEEEeCcHHHH-Hhh-----ccCCc
Confidence 35679999999999999999986 68999999999999999999999888 7899999766543 222 25789
Q ss_pred eEEEEcCC------------ccchHHHHHHHHhcCCCCeEEEEe
Q 025824 158 DFIFVDAD------------KDNYLNYHKRLIELVKVGGVIGYD 189 (247)
Q Consensus 158 D~v~id~~------------~~~~~~~l~~~~~~L~~gG~lv~d 189 (247)
|+|+++.. .......++.+.+.|+|||.+++.
T Consensus 91 D~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 134 (185)
T 3mti_A 91 RAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIM 134 (185)
T ss_dssp EEEEEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEE
Confidence 99998731 133446778899999999999874
No 45
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.62 E-value=3.1e-15 Score=124.18 Aligned_cols=110 Identities=20% Similarity=0.255 Sum_probs=93.1
Q ss_pred hhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCC
Q 025824 76 KLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHG 155 (247)
Q Consensus 76 ~~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~ 155 (247)
...+..+|||+|||+|..+..+++..+ ++|+++|+++.+++.|++++...++.++++++++|+.+. +. ..+
T Consensus 43 ~~~~~~~vLDiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-~~------~~~ 113 (257)
T 3f4k_A 43 ELTDDAKIADIGCGTGGQTLFLADYVK--GQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNL-PF------QNE 113 (257)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHCC--SEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSC-SS------CTT
T ss_pred cCCCCCeEEEeCCCCCHHHHHHHHhCC--CeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhC-CC------CCC
Confidence 344567999999999999999999875 499999999999999999999999988899999999654 21 257
Q ss_pred ceeEEEEcCC--ccchHHHHHHHHhcCCCCeEEEEeccccc
Q 025824 156 SFDFIFVDAD--KDNYLNYHKRLIELVKVGGVIGYDNTLWN 194 (247)
Q Consensus 156 ~fD~v~id~~--~~~~~~~l~~~~~~L~~gG~lv~d~~~~~ 194 (247)
+||+|++... .-+....++.+.++|+|||++++.+..|.
T Consensus 114 ~fD~v~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 154 (257)
T 3f4k_A 114 ELDLIWSEGAIYNIGFERGMNEWSKYLKKGGFIAVSEASWF 154 (257)
T ss_dssp CEEEEEEESCSCCCCHHHHHHHHHTTEEEEEEEEEEEEEES
T ss_pred CEEEEEecChHhhcCHHHHHHHHHHHcCCCcEEEEEEeecc
Confidence 9999998754 22577899999999999999999876544
No 46
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.61 E-value=8.5e-15 Score=115.63 Aligned_cols=117 Identities=19% Similarity=0.192 Sum_probs=98.3
Q ss_pred CHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhh
Q 025824 64 SADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPV 143 (247)
Q Consensus 64 ~~~~~~~l~~l~~~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~ 143 (247)
.......+...+...+..+|||+|||+|..+..++... .+++++|+++.+++.+++++...++.++++++.+|+.+.
T Consensus 18 ~~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~---~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 94 (192)
T 1l3i_A 18 AMEVRCLIMCLAEPGKNDVAVDVGCGTGGVTLELAGRV---RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEA 94 (192)
T ss_dssp CHHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHTTS---SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHH
T ss_pred hHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc---CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHh
Confidence 35555555555566677899999999999999998764 799999999999999999999988877899999998764
Q ss_pred hHHHHhhhcCCCceeEEEEcCCccchHHHHHHHHhcCCCCeEEEEec
Q 025824 144 LDLLIQDEKNHGSFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYDN 190 (247)
Q Consensus 144 l~~l~~~~~~~~~fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv~d~ 190 (247)
++. .++||+|+++....+...+++.+.+.|+|||.+++..
T Consensus 95 ~~~-------~~~~D~v~~~~~~~~~~~~l~~~~~~l~~gG~l~~~~ 134 (192)
T 1l3i_A 95 LCK-------IPDIDIAVVGGSGGELQEILRIIKDKLKPGGRIIVTA 134 (192)
T ss_dssp HTT-------SCCEEEEEESCCTTCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ccc-------CCCCCEEEECCchHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 432 2589999998876678899999999999999999864
No 47
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.61 E-value=2.6e-15 Score=125.42 Aligned_cols=115 Identities=14% Similarity=0.171 Sum_probs=95.8
Q ss_pred HHHHHHHHHhhc-CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhH
Q 025824 67 EGQFLNMLLKLV-NAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLD 145 (247)
Q Consensus 67 ~~~~l~~l~~~~-~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~ 145 (247)
.+.++..++... +..+|||+|||+|..++.++...+ .+|+++|+++.+++.|++++...++.++++++++|+.+...
T Consensus 36 d~~ll~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~--~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~ 113 (259)
T 3lpm_A 36 DAVLLAKFSYLPIRKGKIIDLCSGNGIIPLLLSTRTK--AKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITD 113 (259)
T ss_dssp HHHHHHHHCCCCSSCCEEEETTCTTTHHHHHHHTTCC--CEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGG
T ss_pred HHHHHHHHhcCCCCCCEEEEcCCchhHHHHHHHHhcC--CcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhh
Confidence 356677676666 788999999999999999998754 49999999999999999999999998899999999987654
Q ss_pred HHHhhhcCCCceeEEEEcCCc-----------------------cchHHHHHHHHhcCCCCeEEEE
Q 025824 146 LLIQDEKNHGSFDFIFVDADK-----------------------DNYLNYHKRLIELVKVGGVIGY 188 (247)
Q Consensus 146 ~l~~~~~~~~~fD~v~id~~~-----------------------~~~~~~l~~~~~~L~~gG~lv~ 188 (247)
.+ ..++||+|+++.+. ..+..+++.+.++|+|||.+++
T Consensus 114 ~~-----~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~ 174 (259)
T 3lpm_A 114 LI-----PKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANF 174 (259)
T ss_dssp TS-----CTTCEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEE
T ss_pred hh-----ccCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEE
Confidence 33 25789999997552 1235688899999999999997
No 48
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.60 E-value=4.2e-15 Score=119.70 Aligned_cols=105 Identities=10% Similarity=0.059 Sum_probs=86.1
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCce
Q 025824 78 VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSF 157 (247)
Q Consensus 78 ~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~f 157 (247)
.+..+|||+|||+|..++.++... ..+|+++|+++++++.|+++++..++ ++++++++|+.+.++.. .++|
T Consensus 53 ~~~~~vLDlgcG~G~~~~~l~~~~--~~~V~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~D~~~~~~~~------~~~f 123 (202)
T 2fpo_A 53 IVDAQCLDCFAGSGALGLEALSRY--AAGATLIEMDRAVSQQLIKNLATLKA-GNARVVNSNAMSFLAQK------GTPH 123 (202)
T ss_dssp HTTCEEEETTCTTCHHHHHHHHTT--CSEEEEECSCHHHHHHHHHHHHHTTC-CSEEEECSCHHHHHSSC------CCCE
T ss_pred cCCCeEEEeCCCcCHHHHHHHhcC--CCEEEEEECCHHHHHHHHHHHHHcCC-CcEEEEECCHHHHHhhc------CCCC
Confidence 367899999999999999877652 35999999999999999999999887 68999999998765431 4689
Q ss_pred eEEEEcCC--ccchHHHHHHHHh--cCCCCeEEEEecc
Q 025824 158 DFIFVDAD--KDNYLNYHKRLIE--LVKVGGVIGYDNT 191 (247)
Q Consensus 158 D~v~id~~--~~~~~~~l~~~~~--~L~~gG~lv~d~~ 191 (247)
|+|++|.+ .......++.+.+ +|+|||++++...
T Consensus 124 D~V~~~~p~~~~~~~~~l~~l~~~~~L~pgG~l~i~~~ 161 (202)
T 2fpo_A 124 NIVFVDPPFRRGLLEETINLLEDNGWLADEALIYVESE 161 (202)
T ss_dssp EEEEECCSSSTTTHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred CEEEECCCCCCCcHHHHHHHHHhcCccCCCcEEEEEEC
Confidence 99999977 3455667777765 5999999987643
No 49
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.60 E-value=3.9e-15 Score=126.82 Aligned_cols=106 Identities=13% Similarity=0.116 Sum_probs=85.1
Q ss_pred hcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcC---C-CCcEEEEEecchhhhHHHHhhhc
Q 025824 77 LVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAG---V-AHKIDFREGPALPVLDLLIQDEK 152 (247)
Q Consensus 77 ~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g---~-~~~i~~~~gd~~~~l~~l~~~~~ 152 (247)
..++++|||||||+|..+..+++..+ ..+|+++|+++++++.|++++...+ + ..+++++.+|+.+.++..
T Consensus 81 ~~~~~~VLdiG~G~G~~~~~l~~~~~-~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~----- 154 (294)
T 3adn_A 81 HGHAKHVLIIGGGDGAMLREVTRHKN-VESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQT----- 154 (294)
T ss_dssp STTCCEEEEESCTTCHHHHHHHTCTT-CCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CC-----
T ss_pred CCCCCEEEEEeCChhHHHHHHHhCCC-CCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhc-----
Confidence 35689999999999999999998644 6899999999999999999988642 2 358999999998876542
Q ss_pred CCCceeEEEEcCCcc-------chHHHHHHHHhcCCCCeEEEEe
Q 025824 153 NHGSFDFIFVDADKD-------NYLNYHKRLIELVKVGGVIGYD 189 (247)
Q Consensus 153 ~~~~fD~v~id~~~~-------~~~~~l~~~~~~L~~gG~lv~d 189 (247)
.++||+|++|.... ...++++.+.+.|+|||++++.
T Consensus 155 -~~~fDvIi~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~ 197 (294)
T 3adn_A 155 -SQTFDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQ 197 (294)
T ss_dssp -CCCEEEEEECC----------CCHHHHHHHHHTEEEEEEEEEE
T ss_pred -CCCccEEEECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEe
Confidence 57899999987521 1267899999999999999975
No 50
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.60 E-value=8.2e-15 Score=118.78 Aligned_cols=105 Identities=17% Similarity=0.288 Sum_probs=88.2
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCce
Q 025824 78 VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSF 157 (247)
Q Consensus 78 ~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~f 157 (247)
.+..+|||||||+|..+..+++..| +.+++++|+++.+++.|++++...++ ++++++++|+.+....+ ..++|
T Consensus 40 ~~~~~vLDiGcG~G~~~~~la~~~p-~~~v~gvD~s~~~l~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~-----~~~~~ 112 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGAFVSGMAKQNP-DINYIGIDIQKSVLSYALDKVLEVGV-PNIKLLWVDGSDLTDYF-----EDGEI 112 (214)
T ss_dssp SCCCEEEEESCTTSHHHHHHHHHCT-TSEEEEEESCHHHHHHHHHHHHHHCC-SSEEEEECCSSCGGGTS-----CTTCC
T ss_pred CCCCeEEEEccCcCHHHHHHHHHCC-CCCEEEEEcCHHHHHHHHHHHHHcCC-CCEEEEeCCHHHHHhhc-----CCCCC
Confidence 3567999999999999999999987 78999999999999999999999888 68999999997632212 24689
Q ss_pred eEEEEcCCcc-----------chHHHHHHHHhcCCCCeEEEEe
Q 025824 158 DFIFVDADKD-----------NYLNYHKRLIELVKVGGVIGYD 189 (247)
Q Consensus 158 D~v~id~~~~-----------~~~~~l~~~~~~L~~gG~lv~d 189 (247)
|+|+++.+.. .+..+++.+.+.|+|||++++.
T Consensus 113 D~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 155 (214)
T 1yzh_A 113 DRLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFK 155 (214)
T ss_dssp SEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEE
T ss_pred CEEEEECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEE
Confidence 9999886521 2367999999999999999873
No 51
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.60 E-value=3.8e-15 Score=121.60 Aligned_cols=105 Identities=21% Similarity=0.309 Sum_probs=87.9
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCcee
Q 025824 79 NAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFD 158 (247)
Q Consensus 79 ~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~fD 158 (247)
+..+|||||||+|.++..+++..| +.+|+++|+++.+++.|++++...++. +++++++|+.+.++... ..++||
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p-~~~v~giD~s~~~l~~a~~~~~~~~l~-nv~~~~~Da~~~l~~~~----~~~~~d 107 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRP-EQDFLGIEVHSPGVGACLASAHEEGLS-NLRVMCHDAVEVLHKMI----PDNSLR 107 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCT-TSEEEEECSCHHHHHHHHHHHHHTTCS-SEEEECSCHHHHHHHHS----CTTCEE
T ss_pred CCCeEEEEeeeChHHHHHHHHHCC-CCeEEEEEecHHHHHHHHHHHHHhCCC-cEEEEECCHHHHHHHHc----CCCChh
Confidence 567999999999999999999887 789999999999999999999998874 59999999988766432 257999
Q ss_pred EEEEcCC---c--cc------hHHHHHHHHhcCCCCeEEEEe
Q 025824 159 FIFVDAD---K--DN------YLNYHKRLIELVKVGGVIGYD 189 (247)
Q Consensus 159 ~v~id~~---~--~~------~~~~l~~~~~~L~~gG~lv~d 189 (247)
.|++..+ . .+ ...+++.+.+.|+|||++++.
T Consensus 108 ~v~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~ 149 (218)
T 3dxy_A 108 MVQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMA 149 (218)
T ss_dssp EEEEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEE
T ss_pred eEEEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEE
Confidence 9998622 1 11 135899999999999999873
No 52
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.60 E-value=2.3e-15 Score=125.99 Aligned_cols=121 Identities=13% Similarity=0.191 Sum_probs=96.4
Q ss_pred HHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHH---cCCCCcEEEEEecchhh
Q 025824 67 EGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQK---AGVAHKIDFREGPALPV 143 (247)
Q Consensus 67 ~~~~l~~l~~~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~---~g~~~~i~~~~gd~~~~ 143 (247)
.+.+|..++...+..+|||+|||+|..++.++...+ +.+|+++|+++++++.|++++.. .++.++++++++|+.+.
T Consensus 24 D~~lL~~~~~~~~~~~VLDlG~G~G~~~l~la~~~~-~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~ 102 (260)
T 2ozv_A 24 DAMLLASLVADDRACRIADLGAGAGAAGMAVAARLE-KAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLR 102 (260)
T ss_dssp HHHHHHHTCCCCSCEEEEECCSSSSHHHHHHHHHCT-TEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCC
T ss_pred HHHHHHHHhcccCCCEEEEeCChHhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHH
Confidence 344555555555677999999999999999999886 68999999999999999999998 88877899999999877
Q ss_pred hHHHHhhhcCCCceeEEEEcCCc---------------------cchHHHHHHHHhcCCCCeEEEE
Q 025824 144 LDLLIQDEKNHGSFDFIFVDADK---------------------DNYLNYHKRLIELVKVGGVIGY 188 (247)
Q Consensus 144 l~~l~~~~~~~~~fD~v~id~~~---------------------~~~~~~l~~~~~~L~~gG~lv~ 188 (247)
.+....+....++||+|+++.+. ..+..+++.+.++|+|||.+++
T Consensus 103 ~~~~~~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~ 168 (260)
T 2ozv_A 103 AKARVEAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSL 168 (260)
T ss_dssp HHHHHHTTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEE
T ss_pred hhhhhhhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEE
Confidence 54321111124689999998542 1256788889999999999987
No 53
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.60 E-value=1.1e-14 Score=122.79 Aligned_cols=123 Identities=19% Similarity=0.193 Sum_probs=98.4
Q ss_pred HHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhh
Q 025824 65 ADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVL 144 (247)
Q Consensus 65 ~~~~~~l~~l~~~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l 144 (247)
.....++..++...+..+|||+|||+|..+..+++.++..++|+++|+++.+++.++++++..|+. +++++++|+.+..
T Consensus 69 d~~s~l~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~-~v~~~~~D~~~~~ 147 (274)
T 3ajd_A 69 SISSMIPPIVLNPREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVL-NTIIINADMRKYK 147 (274)
T ss_dssp CSGGGHHHHHHCCCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCHHHHH
T ss_pred CHHHHHHHHHhCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCC-cEEEEeCChHhcc
Confidence 444555556666667789999999999999999998874589999999999999999999999985 7999999997654
Q ss_pred HHHHhhhcCCCceeEEEEcCCcc---------------------chHHHHHHHHhcCCCCeEEEEecc
Q 025824 145 DLLIQDEKNHGSFDFIFVDADKD---------------------NYLNYHKRLIELVKVGGVIGYDNT 191 (247)
Q Consensus 145 ~~l~~~~~~~~~fD~v~id~~~~---------------------~~~~~l~~~~~~L~~gG~lv~d~~ 191 (247)
..+.. ..++||+|++|.+.. ....+++.+.++|+|||.+++...
T Consensus 148 ~~~~~---~~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stc 212 (274)
T 3ajd_A 148 DYLLK---NEIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTC 212 (274)
T ss_dssp HHHHH---TTCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEES
T ss_pred hhhhh---ccccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEEC
Confidence 43211 146899999996532 236788889999999999997543
No 54
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.59 E-value=8.8e-15 Score=124.79 Aligned_cols=106 Identities=15% Similarity=0.175 Sum_probs=86.8
Q ss_pred hcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHH--cCC-CCcEEEEEecchhhhHHHHhhhcC
Q 025824 77 LVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQK--AGV-AHKIDFREGPALPVLDLLIQDEKN 153 (247)
Q Consensus 77 ~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~--~g~-~~~i~~~~gd~~~~l~~l~~~~~~ 153 (247)
..++++|||||||+|..+..+++..+ ..+|+++|+++.+++.|++++.. .++ .++++++++|+.+.++..
T Consensus 88 ~~~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~------ 160 (296)
T 1inl_A 88 HPNPKKVLIIGGGDGGTLREVLKHDS-VEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKF------ 160 (296)
T ss_dssp SSSCCEEEEEECTTCHHHHHHTTSTT-CSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGC------
T ss_pred CCCCCEEEEEcCCcCHHHHHHHhcCC-CCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhC------
Confidence 35678999999999999999998654 68999999999999999999865 233 368999999998766542
Q ss_pred CCceeEEEEcCCcc--------chHHHHHHHHhcCCCCeEEEEe
Q 025824 154 HGSFDFIFVDADKD--------NYLNYHKRLIELVKVGGVIGYD 189 (247)
Q Consensus 154 ~~~fD~v~id~~~~--------~~~~~l~~~~~~L~~gG~lv~d 189 (247)
.++||+|++|.... ....+++.+.+.|+|||++++.
T Consensus 161 ~~~fD~Ii~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 204 (296)
T 1inl_A 161 KNEFDVIIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAE 204 (296)
T ss_dssp SSCEEEEEEEC----------CCSHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCceEEEEcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 46899999987532 2368899999999999999985
No 55
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.59 E-value=4.5e-15 Score=123.52 Aligned_cols=103 Identities=15% Similarity=0.169 Sum_probs=87.6
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCcee
Q 025824 79 NAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFD 158 (247)
Q Consensus 79 ~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~fD 158 (247)
++.+|||||||+|..++.++...| +++|+++|+++++++.|+++++..++. +++++++|+.+...... ..++||
T Consensus 80 ~~~~vLDiG~G~G~~~i~la~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~l~-~v~~~~~d~~~~~~~~~----~~~~fD 153 (249)
T 3g89_A 80 GPLRVLDLGTGAGFPGLPLKIVRP-ELELVLVDATRKKVAFVERAIEVLGLK-GARALWGRAEVLAREAG----HREAYA 153 (249)
T ss_dssp SSCEEEEETCTTTTTHHHHHHHCT-TCEEEEEESCHHHHHHHHHHHHHHTCS-SEEEEECCHHHHTTSTT----TTTCEE
T ss_pred CCCEEEEEcCCCCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHhCCC-ceEEEECcHHHhhcccc----cCCCce
Confidence 467999999999999999999876 789999999999999999999999985 49999999976532100 137899
Q ss_pred EEEEcCCccchHHHHHHHHhcCCCCeEEEE
Q 025824 159 FIFVDADKDNYLNYHKRLIELVKVGGVIGY 188 (247)
Q Consensus 159 ~v~id~~~~~~~~~l~~~~~~L~~gG~lv~ 188 (247)
+|+..+. .....+++.+.++|+|||.+++
T Consensus 154 ~I~s~a~-~~~~~ll~~~~~~LkpgG~l~~ 182 (249)
T 3g89_A 154 RAVARAV-APLCVLSELLLPFLEVGGAAVA 182 (249)
T ss_dssp EEEEESS-CCHHHHHHHHGGGEEEEEEEEE
T ss_pred EEEECCc-CCHHHHHHHHHHHcCCCeEEEE
Confidence 9999765 3567889999999999999885
No 56
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.59 E-value=3.6e-14 Score=126.93 Aligned_cols=121 Identities=17% Similarity=0.217 Sum_probs=98.7
Q ss_pred cCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchh
Q 025824 63 TSADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALP 142 (247)
Q Consensus 63 ~~~~~~~~l~~l~~~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~ 142 (247)
+......++..++...+..+|||+|||+|..+..+++.++ +++|+++|+++.+++.++++++..|+ +++++++|+.+
T Consensus 230 ~qd~~s~~~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~-~~~v~a~D~~~~~l~~~~~~~~~~g~--~~~~~~~D~~~ 306 (429)
T 1sqg_A 230 VQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAP-EAQVVAVDIDEQRLSRVYDNLKRLGM--KATVKQGDGRY 306 (429)
T ss_dssp ECCHHHHTHHHHHCCCTTCEEEEESCTTCHHHHHHHHHCT-TCEEEEEESSTTTHHHHHHHHHHTTC--CCEEEECCTTC
T ss_pred eeCHHHHHHHHHcCCCCcCeEEEECCCchHHHHHHHHHcC-CCEEEEECCCHHHHHHHHHHHHHcCC--CeEEEeCchhh
Confidence 3455666666677767778999999999999999999887 58999999999999999999999987 47899999987
Q ss_pred hhHHHHhhhcCCCceeEEEEcCCccc-------------------------hHHHHHHHHhcCCCCeEEEEecc
Q 025824 143 VLDLLIQDEKNHGSFDFIFVDADKDN-------------------------YLNYHKRLIELVKVGGVIGYDNT 191 (247)
Q Consensus 143 ~l~~l~~~~~~~~~fD~v~id~~~~~-------------------------~~~~l~~~~~~L~~gG~lv~d~~ 191 (247)
..+.+ ..++||+|++|+++.. ...+++.+.++|+|||.+++...
T Consensus 307 ~~~~~-----~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystc 375 (429)
T 1sqg_A 307 PSQWC-----GEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATC 375 (429)
T ss_dssp THHHH-----TTCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEES
T ss_pred chhhc-----ccCCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 64433 2468999999976321 13678888899999999997654
No 57
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.59 E-value=2e-14 Score=115.48 Aligned_cols=100 Identities=11% Similarity=0.069 Sum_probs=87.6
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCcee
Q 025824 79 NAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFD 158 (247)
Q Consensus 79 ~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~fD 158 (247)
+..+|||+|||+|..+..++...+ +.+++++|+++.+++.+++++...++.+ ++++++|+.+..+ .++||
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~~~--------~~~~D 134 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRP-EAHFTLLDSLGKRVRFLRQVQHELKLEN-IEPVQSRVEEFPS--------EPPFD 134 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCT-TSEEEEEESCHHHHHHHHHHHHHTTCSS-EEEEECCTTTSCC--------CSCEE
T ss_pred CCCeEEEECCCCCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHcCCCC-eEEEecchhhCCc--------cCCcC
Confidence 468999999999999999999876 7899999999999999999999988754 9999999976532 46899
Q ss_pred EEEEcCCccchHHHHHHHHhcCCCCeEEEEe
Q 025824 159 FIFVDADKDNYLNYHKRLIELVKVGGVIGYD 189 (247)
Q Consensus 159 ~v~id~~~~~~~~~l~~~~~~L~~gG~lv~d 189 (247)
+|++... ..+..+++.+.+.|+|||++++.
T Consensus 135 ~i~~~~~-~~~~~~l~~~~~~L~~gG~l~~~ 164 (207)
T 1jsx_A 135 GVISRAF-ASLNDMVSWCHHLPGEQGRFYAL 164 (207)
T ss_dssp EEECSCS-SSHHHHHHHHTTSEEEEEEEEEE
T ss_pred EEEEecc-CCHHHHHHHHHHhcCCCcEEEEE
Confidence 9997654 56788999999999999999975
No 58
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.59 E-value=7.7e-15 Score=118.32 Aligned_cols=112 Identities=17% Similarity=0.190 Sum_probs=92.5
Q ss_pred CHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhh
Q 025824 64 SADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPV 143 (247)
Q Consensus 64 ~~~~~~~l~~l~~~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~ 143 (247)
.+.....+...+...+..+|||+|||+|+.+..+++. +++|+++|+++++++.|++++...++. +++++.+|+.+.
T Consensus 62 ~~~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~ 137 (210)
T 3lbf_A 62 QPYMVARMTELLELTPQSRVLEIGTGSGYQTAILAHL---VQHVCSVERIKGLQWQARRRLKNLDLH-NVSTRHGDGWQG 137 (210)
T ss_dssp CHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH---SSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCGGGC
T ss_pred CHHHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHh---CCEEEEEecCHHHHHHHHHHHHHcCCC-ceEEEECCcccC
Confidence 4555566655666667889999999999999999987 579999999999999999999998875 799999999875
Q ss_pred hHHHHhhhcCCCceeEEEEcCCccchHHHHHHHHhcCCCCeEEEEe
Q 025824 144 LDLLIQDEKNHGSFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYD 189 (247)
Q Consensus 144 l~~l~~~~~~~~~fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv~d 189 (247)
.+. .++||+|+++....... +.+.+.|+|||.+++.
T Consensus 138 ~~~-------~~~~D~i~~~~~~~~~~---~~~~~~L~pgG~lv~~ 173 (210)
T 3lbf_A 138 WQA-------RAPFDAIIVTAAPPEIP---TALMTQLDEGGILVLP 173 (210)
T ss_dssp CGG-------GCCEEEEEESSBCSSCC---THHHHTEEEEEEEEEE
T ss_pred Ccc-------CCCccEEEEccchhhhh---HHHHHhcccCcEEEEE
Confidence 542 47899999987654443 3578899999999974
No 59
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.59 E-value=5.2e-15 Score=126.70 Aligned_cols=106 Identities=15% Similarity=0.107 Sum_probs=87.8
Q ss_pred cCCC--EEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCC
Q 025824 78 VNAK--NTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHG 155 (247)
Q Consensus 78 ~~~~--~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~ 155 (247)
..++ +|||||||+|..+.++++..| +.+++++|+++++++.|++++.... ..+++++++|+.+++..+ ..+
T Consensus 86 p~p~~~rVLdIG~G~G~la~~la~~~p-~~~v~~VEidp~vi~~Ar~~~~~~~-~~rv~v~~~Da~~~l~~~-----~~~ 158 (317)
T 3gjy_A 86 QDASKLRITHLGGGACTMARYFADVYP-QSRNTVVELDAELARLSREWFDIPR-APRVKIRVDDARMVAESF-----TPA 158 (317)
T ss_dssp SCGGGCEEEEESCGGGHHHHHHHHHST-TCEEEEEESCHHHHHHHHHHSCCCC-TTTEEEEESCHHHHHHTC-----CTT
T ss_pred CCCCCCEEEEEECCcCHHHHHHHHHCC-CcEEEEEECCHHHHHHHHHhccccC-CCceEEEECcHHHHHhhc-----cCC
Confidence 3444 999999999999999999876 6799999999999999999986432 368999999999877643 147
Q ss_pred ceeEEEEcCCcc-------chHHHHHHHHhcCCCCeEEEEec
Q 025824 156 SFDFIFVDADKD-------NYLNYHKRLIELVKVGGVIGYDN 190 (247)
Q Consensus 156 ~fD~v~id~~~~-------~~~~~l~~~~~~L~~gG~lv~d~ 190 (247)
+||+||+|.... ...++++.+.+.|+|||++++..
T Consensus 159 ~fDvIi~D~~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~ 200 (317)
T 3gjy_A 159 SRDVIIRDVFAGAITPQNFTTVEFFEHCHRGLAPGGLYVANC 200 (317)
T ss_dssp CEEEEEECCSTTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEEe
Confidence 899999986421 12689999999999999999864
No 60
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.59 E-value=1.2e-14 Score=118.04 Aligned_cols=105 Identities=13% Similarity=0.253 Sum_probs=87.0
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCce
Q 025824 78 VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSF 157 (247)
Q Consensus 78 ~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~f 157 (247)
.+..+|||||||+|..++.+++..| +.+++++|+++.+++.|++++...++ .+++++++|+.+. +... ..++|
T Consensus 37 ~~~~~vLDiGcG~G~~~~~la~~~p-~~~v~giD~s~~~l~~a~~~~~~~~~-~nv~~~~~d~~~l-~~~~----~~~~~ 109 (213)
T 2fca_A 37 NDNPIHIEVGTGKGQFISGMAKQNP-DINYIGIELFKSVIVTAVQKVKDSEA-QNVKLLNIDADTL-TDVF----EPGEV 109 (213)
T ss_dssp SCCCEEEEECCTTSHHHHHHHHHCT-TSEEEEECSCHHHHHHHHHHHHHSCC-SSEEEECCCGGGH-HHHC----CTTSC
T ss_pred CCCceEEEEecCCCHHHHHHHHHCC-CCCEEEEEechHHHHHHHHHHHHcCC-CCEEEEeCCHHHH-Hhhc----CcCCc
Confidence 3567999999999999999999876 78999999999999999999999887 5699999999873 3321 25689
Q ss_pred eEEEEcCCcc-----------chHHHHHHHHhcCCCCeEEEEe
Q 025824 158 DFIFVDADKD-----------NYLNYHKRLIELVKVGGVIGYD 189 (247)
Q Consensus 158 D~v~id~~~~-----------~~~~~l~~~~~~L~~gG~lv~d 189 (247)
|.|++..+.. .+..+++.+.+.|+|||.|++.
T Consensus 110 d~v~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~ 152 (213)
T 2fca_A 110 KRVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFK 152 (213)
T ss_dssp CEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEE
T ss_pred CEEEEECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEE
Confidence 9998754311 1467899999999999999874
No 61
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.58 E-value=6.8e-15 Score=120.23 Aligned_cols=111 Identities=11% Similarity=0.112 Sum_probs=91.7
Q ss_pred HHHHHhhcC-CCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHh
Q 025824 71 LNMLLKLVN-AKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQ 149 (247)
Q Consensus 71 l~~l~~~~~-~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~ 149 (247)
|..+....+ ..+|||||||+|+.++.++...+ ..+|+++|+++.+++.|++|++.+|+.++|+++.+|+.+.++.
T Consensus 6 L~~l~~~v~~g~~VlDIGtGsG~l~i~la~~~~-~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~--- 81 (225)
T 3kr9_A 6 LELVASFVSQGAILLDVGSDHAYLPIELVERGQ-IKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEE--- 81 (225)
T ss_dssp HHHHHTTSCTTEEEEEETCSTTHHHHHHHHTTS-EEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG---
T ss_pred HHHHHHhCCCCCEEEEeCCCcHHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhccc---
Confidence 455555544 45899999999999999998755 6799999999999999999999999988999999999876542
Q ss_pred hhcCCCceeEEEEcCC-ccchHHHHHHHHhcCCCCeEEEEe
Q 025824 150 DEKNHGSFDFIFVDAD-KDNYLNYHKRLIELVKVGGVIGYD 189 (247)
Q Consensus 150 ~~~~~~~fD~v~id~~-~~~~~~~l~~~~~~L~~gG~lv~d 189 (247)
..+||+|++.+. ..-...+++.+...|+++|.+|+.
T Consensus 82 ----~~~~D~IviaG~Gg~~i~~Il~~~~~~L~~~~~lVlq 118 (225)
T 3kr9_A 82 ----TDQVSVITIAGMGGRLIARILEEGLGKLANVERLILQ 118 (225)
T ss_dssp ----GGCCCEEEEEEECHHHHHHHHHHTGGGCTTCCEEEEE
T ss_pred ----CcCCCEEEEcCCChHHHHHHHHHHHHHhCCCCEEEEE
Confidence 236999987543 333578888889999999999974
No 62
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.58 E-value=1.7e-14 Score=122.88 Aligned_cols=114 Identities=11% Similarity=0.119 Sum_probs=94.4
Q ss_pred HHHHHHHHhh---cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhh
Q 025824 68 GQFLNMLLKL---VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVL 144 (247)
Q Consensus 68 ~~~l~~l~~~---~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l 144 (247)
...+..++.. .+..+|||||||+|..+..+++..+ .+|+++|+++++++.|++++...++.++++++.+|+.+.
T Consensus 58 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~- 134 (302)
T 3hem_A 58 YAKRKLALDKLNLEPGMTLLDIGCGWGSTMRHAVAEYD--VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF- 134 (302)
T ss_dssp HHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC-
T ss_pred HHHHHHHHHHcCCCCcCEEEEeeccCcHHHHHHHHhCC--CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc-
Confidence 3344444443 4567999999999999999998764 799999999999999999999999988999999999754
Q ss_pred HHHHhhhcCCCceeEEEEcCCc------------cchHHHHHHHHhcCCCCeEEEEecccc
Q 025824 145 DLLIQDEKNHGSFDFIFVDADK------------DNYLNYHKRLIELVKVGGVIGYDNTLW 193 (247)
Q Consensus 145 ~~l~~~~~~~~~fD~v~id~~~------------~~~~~~l~~~~~~L~~gG~lv~d~~~~ 193 (247)
.++||+|++...- ..+..+++.+.++|+|||.+++.+...
T Consensus 135 ---------~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 186 (302)
T 3hem_A 135 ---------DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITI 186 (302)
T ss_dssp ---------CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEEC
T ss_pred ---------CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEec
Confidence 3789999986542 334789999999999999999977654
No 63
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.58 E-value=2e-14 Score=129.32 Aligned_cols=123 Identities=15% Similarity=0.221 Sum_probs=98.6
Q ss_pred cCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchh
Q 025824 63 TSADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALP 142 (247)
Q Consensus 63 ~~~~~~~~l~~l~~~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~ 142 (247)
+......++..++...+..+|||+|||+|..+..+++.++..++|+++|+++.+++.+++++++.|+ .+++++++|+.+
T Consensus 243 ~qd~~s~l~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~-~~v~~~~~D~~~ 321 (450)
T 2yxl_A 243 VQEEASAVASIVLDPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGI-KIVKPLVKDARK 321 (450)
T ss_dssp ECCHHHHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTC-CSEEEECSCTTC
T ss_pred ecCchhHHHHHhcCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCC-CcEEEEEcChhh
Confidence 3345566666666666778999999999999999999887458999999999999999999999998 469999999876
Q ss_pred hhHHHHhhhcCCCceeEEEEcCCccch-------------------------HHHHHHHHhcCCCCeEEEEecc
Q 025824 143 VLDLLIQDEKNHGSFDFIFVDADKDNY-------------------------LNYHKRLIELVKVGGVIGYDNT 191 (247)
Q Consensus 143 ~l~~l~~~~~~~~~fD~v~id~~~~~~-------------------------~~~l~~~~~~L~~gG~lv~d~~ 191 (247)
..+.+ ..++||+|++|+++... ..+++.+.++|+|||.+++...
T Consensus 322 ~~~~~-----~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tc 390 (450)
T 2yxl_A 322 APEII-----GEEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTC 390 (450)
T ss_dssp CSSSS-----CSSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEES
T ss_pred cchhh-----ccCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 53222 13689999999764221 4678888999999999997544
No 64
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.58 E-value=3.1e-14 Score=128.86 Aligned_cols=122 Identities=14% Similarity=0.189 Sum_probs=98.2
Q ss_pred cCHHHHHHHHHHHhhc--CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecc
Q 025824 63 TSADEGQFLNMLLKLV--NAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPA 140 (247)
Q Consensus 63 ~~~~~~~~l~~l~~~~--~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~ 140 (247)
+......++..++... +..+|||+|||+|..|..+++.++..++|+++|+++.+++.+++++++.|+. +++++++|+
T Consensus 99 ~Qd~~s~l~~~~L~~~~~~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~-nv~~~~~D~ 177 (479)
T 2frx_A 99 IQEASSMLPVAALFADGNAPQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGIS-NVALTHFDG 177 (479)
T ss_dssp ECCHHHHHHHHHHTTTTCCCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCC-SEEEECCCS
T ss_pred EECHHHHHHHHHhCcccCCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC-cEEEEeCCH
Confidence 3455555666666655 7789999999999999999999876799999999999999999999999984 699999999
Q ss_pred hhhhHHHHhhhcCCCceeEEEEcCCccc-------------------------hHHHHHHHHhcCCCCeEEEEecc
Q 025824 141 LPVLDLLIQDEKNHGSFDFIFVDADKDN-------------------------YLNYHKRLIELVKVGGVIGYDNT 191 (247)
Q Consensus 141 ~~~l~~l~~~~~~~~~fD~v~id~~~~~-------------------------~~~~l~~~~~~L~~gG~lv~d~~ 191 (247)
.+..... .++||.|++|+++.. ...+++.+.++|||||.|++...
T Consensus 178 ~~~~~~~------~~~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTc 247 (479)
T 2frx_A 178 RVFGAAV------PEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTC 247 (479)
T ss_dssp TTHHHHS------TTCEEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred HHhhhhc------cccCCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecc
Confidence 7653322 468999999976321 13567888899999999997543
No 65
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.58 E-value=2.6e-14 Score=112.94 Aligned_cols=110 Identities=16% Similarity=0.107 Sum_probs=90.4
Q ss_pred HHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCC-cEEEEEecchhhhHHHH
Q 025824 70 FLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAH-KIDFREGPALPVLDLLI 148 (247)
Q Consensus 70 ~l~~l~~~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~-~i~~~~gd~~~~l~~l~ 148 (247)
.+...+...+..+|||+|||+|..+..+++. +.+++++|+++.+++.+++++...++.+ +++++.+|+.+.++
T Consensus 43 ~l~~~~~~~~~~~vLdiG~G~G~~~~~~~~~---~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~--- 116 (194)
T 1dus_A 43 ILVENVVVDKDDDILDLGCGYGVIGIALADE---VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVK--- 116 (194)
T ss_dssp HHHHHCCCCTTCEEEEETCTTSHHHHHHGGG---SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCT---
T ss_pred HHHHHcccCCCCeEEEeCCCCCHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcccc---
Confidence 3333344456789999999999999999887 5799999999999999999999888754 59999999977543
Q ss_pred hhhcCCCceeEEEEcCCc----cchHHHHHHHHhcCCCCeEEEEec
Q 025824 149 QDEKNHGSFDFIFVDADK----DNYLNYHKRLIELVKVGGVIGYDN 190 (247)
Q Consensus 149 ~~~~~~~~fD~v~id~~~----~~~~~~l~~~~~~L~~gG~lv~d~ 190 (247)
.++||+|+++... .....+++.+.+.|+|||.+++..
T Consensus 117 -----~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 157 (194)
T 1dus_A 117 -----DRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVI 157 (194)
T ss_dssp -----TSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred -----cCCceEEEECCCcccchhHHHHHHHHHHHHcCCCCEEEEEE
Confidence 4689999998762 345678899999999999999754
No 66
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.58 E-value=2e-14 Score=121.11 Aligned_cols=116 Identities=18% Similarity=0.221 Sum_probs=96.4
Q ss_pred CHHHHHHHHHHHhh--cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecch
Q 025824 64 SADEGQFLNMLLKL--VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPAL 141 (247)
Q Consensus 64 ~~~~~~~l~~l~~~--~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~ 141 (247)
.++...++..++.. .++.+|||+|||+|..++.++...+ +.+|+++|+++++++.|++++...++. +++++++|+.
T Consensus 92 r~~te~l~~~~l~~~~~~~~~vLDlG~GsG~~~~~la~~~~-~~~v~~vD~s~~~l~~a~~n~~~~~~~-~v~~~~~d~~ 169 (276)
T 2b3t_A 92 RPDTECLVEQALARLPEQPCRILDLGTGTGAIALALASERP-DCEIIAVDRMPDAVSLAQRNAQHLAIK-NIHILQSDWF 169 (276)
T ss_dssp CTTHHHHHHHHHHHSCSSCCEEEEETCTTSHHHHHHHHHCT-TSEEEEECSSHHHHHHHHHHHHHHTCC-SEEEECCSTT
T ss_pred CchHHHHHHHHHHhcccCCCEEEEecCCccHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCC-ceEEEEcchh
Confidence 35667777777665 3567999999999999999998876 789999999999999999999998875 7999999997
Q ss_pred hhhHHHHhhhcCCCceeEEEEcCCc----------------------------cchHHHHHHHHhcCCCCeEEEEe
Q 025824 142 PVLDLLIQDEKNHGSFDFIFVDADK----------------------------DNYLNYHKRLIELVKVGGVIGYD 189 (247)
Q Consensus 142 ~~l~~l~~~~~~~~~fD~v~id~~~----------------------------~~~~~~l~~~~~~L~~gG~lv~d 189 (247)
+.++ .++||+|+++.+. ..+..+++.+.+.|+|||++++.
T Consensus 170 ~~~~--------~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~ 237 (276)
T 2b3t_A 170 SALA--------GQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLE 237 (276)
T ss_dssp GGGT--------TCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred hhcc--------cCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 6532 4689999998542 23467788889999999999985
No 67
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.58 E-value=2.4e-14 Score=111.26 Aligned_cols=104 Identities=14% Similarity=0.103 Sum_probs=85.9
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCcee
Q 025824 79 NAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFD 158 (247)
Q Consensus 79 ~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~fD 158 (247)
+..+|||+|||+|..+..+++..+ +++++|+++++++.|++++...++ +++++++|+.+.++.+.. ..++||
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~~---~~~~~D 112 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEGW---EAVLVEKDPEAVRLLKENVRRTGL--GARVVALPVEVFLPEAKA---QGERFT 112 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTTC---EEEEECCCHHHHHHHHHHHHHHTC--CCEEECSCHHHHHHHHHH---TTCCEE
T ss_pred CCCeEEEeCCCcCHHHHHHHHCCC---eEEEEeCCHHHHHHHHHHHHHcCC--ceEEEeccHHHHHHhhhc---cCCceE
Confidence 678999999999999999998643 599999999999999999998887 799999999876655421 124899
Q ss_pred EEEEcCCc-cchHHHHHHHH--hcCCCCeEEEEec
Q 025824 159 FIFVDADK-DNYLNYHKRLI--ELVKVGGVIGYDN 190 (247)
Q Consensus 159 ~v~id~~~-~~~~~~l~~~~--~~L~~gG~lv~d~ 190 (247)
+|+++... ......++.+. +.|+|||++++..
T Consensus 113 ~i~~~~~~~~~~~~~~~~~~~~~~L~~gG~~~~~~ 147 (171)
T 1ws6_A 113 VAFMAPPYAMDLAALFGELLASGLVEAGGLYVLQH 147 (171)
T ss_dssp EEEECCCTTSCTTHHHHHHHHHTCEEEEEEEEEEE
T ss_pred EEEECCCCchhHHHHHHHHHhhcccCCCcEEEEEe
Confidence 99998653 45566777777 9999999999754
No 68
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.58 E-value=5.1e-14 Score=113.10 Aligned_cols=112 Identities=17% Similarity=0.216 Sum_probs=92.1
Q ss_pred HHHHHHHHhh-cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHH
Q 025824 68 GQFLNMLLKL-VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDL 146 (247)
Q Consensus 68 ~~~l~~l~~~-~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~ 146 (247)
..++..+... .+..+|||+|||+|..+..+++. + ..+++++|+++.+++.|++++...++.+ ++++.+|+.+..
T Consensus 48 ~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~l~~~-~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~~-- 122 (205)
T 3grz_A 48 QLAMLGIERAMVKPLTVADVGTGSGILAIAAHKL-G-AKSVLATDISDESMTAAEENAALNGIYD-IALQKTSLLADV-- 122 (205)
T ss_dssp HHHHHHHHHHCSSCCEEEEETCTTSHHHHHHHHT-T-CSEEEEEESCHHHHHHHHHHHHHTTCCC-CEEEESSTTTTC--
T ss_pred HHHHHHHHHhccCCCEEEEECCCCCHHHHHHHHC-C-CCEEEEEECCHHHHHHHHHHHHHcCCCc-eEEEeccccccC--
Confidence 3344444433 45679999999999999998874 3 5799999999999999999999988865 999999987642
Q ss_pred HHhhhcCCCceeEEEEcCCccchHHHHHHHHhcCCCCeEEEEecc
Q 025824 147 LIQDEKNHGSFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYDNT 191 (247)
Q Consensus 147 l~~~~~~~~~fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv~d~~ 191 (247)
.++||+|+++........+++.+.++|+|||.+++.+.
T Consensus 123 -------~~~fD~i~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 160 (205)
T 3grz_A 123 -------DGKFDLIVANILAEILLDLIPQLDSHLNEDGQVIFSGI 160 (205)
T ss_dssp -------CSCEEEEEEESCHHHHHHHGGGSGGGEEEEEEEEEEEE
T ss_pred -------CCCceEEEECCcHHHHHHHHHHHHHhcCCCCEEEEEec
Confidence 47899999998876677888888999999999998543
No 69
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.57 E-value=1.8e-14 Score=123.83 Aligned_cols=121 Identities=18% Similarity=0.268 Sum_probs=99.1
Q ss_pred cCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchh
Q 025824 63 TSADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALP 142 (247)
Q Consensus 63 ~~~~~~~~l~~l~~~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~ 142 (247)
+......++..++...+..+|||+|||+|..+..+++.++++++|+++|+++.+++.+++++++.|+. +++++++|+.+
T Consensus 102 ~qd~~s~l~~~~l~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~-~v~~~~~D~~~ 180 (315)
T 1ixk_A 102 IQEASSMYPPVALDPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVL-NVILFHSSSLH 180 (315)
T ss_dssp ECCHHHHHHHHHHCCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCC-SEEEESSCGGG
T ss_pred EeCHHHHHHHHHhCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCC-eEEEEECChhh
Confidence 34555666666666677789999999999999999998876789999999999999999999999984 69999999976
Q ss_pred hhHHHHhhhcCCCceeEEEEcCCccc-------------------------hHHHHHHHHhcCCCCeEEEEecc
Q 025824 143 VLDLLIQDEKNHGSFDFIFVDADKDN-------------------------YLNYHKRLIELVKVGGVIGYDNT 191 (247)
Q Consensus 143 ~l~~l~~~~~~~~~fD~v~id~~~~~-------------------------~~~~l~~~~~~L~~gG~lv~d~~ 191 (247)
... . .++||+|++|++... ...+++.+.++|||||.+++...
T Consensus 181 ~~~-~------~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stc 247 (315)
T 1ixk_A 181 IGE-L------NVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTC 247 (315)
T ss_dssp GGG-G------CCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred ccc-c------cccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeC
Confidence 533 2 468999999865311 14778888999999999998544
No 70
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.57 E-value=6.1e-14 Score=118.85 Aligned_cols=115 Identities=17% Similarity=0.319 Sum_probs=93.7
Q ss_pred CHHHHHHHHHHHhh---cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecc
Q 025824 64 SADEGQFLNMLLKL---VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPA 140 (247)
Q Consensus 64 ~~~~~~~l~~l~~~---~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~ 140 (247)
.++...++..+... .++.+|||+|||+|..++.++.. + +.+|+++|+++++++.|++|+...++.++++++++|+
T Consensus 105 r~~te~lv~~~l~~~~~~~~~~vLDlG~GsG~~~~~la~~-~-~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~ 182 (284)
T 1nv8_A 105 RPETEELVELALELIRKYGIKTVADIGTGSGAIGVSVAKF-S-DAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEF 182 (284)
T ss_dssp CTTHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHH-S-SCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESST
T ss_pred ChhHHHHHHHHHHHhcccCCCEEEEEeCchhHHHHHHHHC-C-CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcc
Confidence 35566666655543 35679999999999999999998 5 8999999999999999999999999987899999999
Q ss_pred hhhhHHHHhhhcCCCce---eEEEEcCCccc----------------------hHHHHHHHH-hcCCCCeEEEEe
Q 025824 141 LPVLDLLIQDEKNHGSF---DFIFVDADKDN----------------------YLNYHKRLI-ELVKVGGVIGYD 189 (247)
Q Consensus 141 ~~~l~~l~~~~~~~~~f---D~v~id~~~~~----------------------~~~~l~~~~-~~L~~gG~lv~d 189 (247)
.+.++ ++| |+|+.+.+... -..+++.+. +.|+|||++++.
T Consensus 183 ~~~~~---------~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e 248 (284)
T 1nv8_A 183 LEPFK---------EKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLME 248 (284)
T ss_dssp TGGGG---------GGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEE
T ss_pred hhhcc---------cccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEE
Confidence 87542 367 99999854211 126789999 999999999974
No 71
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.57 E-value=1.3e-13 Score=120.87 Aligned_cols=151 Identities=20% Similarity=0.213 Sum_probs=104.9
Q ss_pred cCCCEEEEEccc------ccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhh--hHHHHh
Q 025824 78 VNAKNTMEIGVY------TGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPV--LDLLIQ 149 (247)
Q Consensus 78 ~~~~~vLEiG~g------~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~--l~~l~~ 149 (247)
.++.+||||||| +|..++.+++...++++|+++|+++++. . ...+++++++|+.+. ...+..
T Consensus 215 ~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~---------~-~~~rI~fv~GDa~dlpf~~~l~~ 284 (419)
T 3sso_A 215 NQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH---------V-DELRIRTIQGDQNDAEFLDRIAR 284 (419)
T ss_dssp TSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG---------G-CBTTEEEEECCTTCHHHHHHHHH
T ss_pred CCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh---------h-cCCCcEEEEecccccchhhhhhc
Confidence 367899999999 6777777776643389999999999972 1 236899999999763 222211
Q ss_pred hhcCCCceeEEEEcCCc--cchHHHHHHHHhcCCCCeEEEEecccc------cccccCCCCCcchhhhchHHHHHHHHHH
Q 025824 150 DEKNHGSFDFIFVDADK--DNYLNYHKRLIELVKVGGVIGYDNTLW------NGSVVAPPDAPLRKYVRYYRDFVLELNK 221 (247)
Q Consensus 150 ~~~~~~~fD~v~id~~~--~~~~~~l~~~~~~L~~gG~lv~d~~~~------~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (247)
. .++||+||.|+.+ .+....|+.+.++|||||++++.|+.+ .|..... .....+...++.+.+
T Consensus 285 ~---d~sFDlVisdgsH~~~d~~~aL~el~rvLKPGGvlVi~Dl~tsy~p~f~G~~~~~------~~~~tii~~lk~l~D 355 (419)
T 3sso_A 285 R---YGPFDIVIDDGSHINAHVRTSFAALFPHVRPGGLYVIEDMWTAYWPGFGGQADPQ------ECSGTSLGLLKSLID 355 (419)
T ss_dssp H---HCCEEEEEECSCCCHHHHHHHHHHHGGGEEEEEEEEEECGGGGGCTBTTCCSSTT------CCTTSHHHHHHHHHH
T ss_pred c---cCCccEEEECCcccchhHHHHHHHHHHhcCCCeEEEEEecccccCcccCCCccCC------cchhHHHHHHHHHHH
Confidence 1 3789999998764 456788999999999999999999873 2222111 123566677777766
Q ss_pred HHHcC---------CCee---EEeeecCCeeEEEEEcC
Q 025824 222 ALAAD---------PRIE---ICMLPVGDGVTICRRIK 247 (247)
Q Consensus 222 ~i~~~---------~~~~---~~~lp~~dG~~i~~k~~ 247 (247)
.+... |.+. ..-+.+-+++.++.|.+
T Consensus 356 ~l~~~~~~~~~~~~~~~~~~~~~~~h~y~~i~~~~kg~ 393 (419)
T 3sso_A 356 AIQHQELPSDPNRSPGYVDRNIVGLHVYHNVAFVEKGR 393 (419)
T ss_dssp HHTGGGSCCCTTCCCCHHHHHEEEEEEETTEEEEEESC
T ss_pred HhcccccCCCcCCCCCccccceeEEEecCcEEEEEecc
Confidence 65431 1221 33467889999998864
No 72
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.56 E-value=6.4e-14 Score=113.43 Aligned_cols=113 Identities=17% Similarity=0.267 Sum_probs=93.4
Q ss_pred HHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcC
Q 025824 74 LLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKN 153 (247)
Q Consensus 74 l~~~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~ 153 (247)
.+...+..+|||+|||+|..+..+++..++..+++++|+++.+++.+++++...++. +++++.+|+.+.. + .
T Consensus 32 ~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~~d~~~~~--~-----~ 103 (219)
T 3dh0_A 32 EFGLKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLK-NVEVLKSEENKIP--L-----P 103 (219)
T ss_dssp HHTCCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCT-TEEEEECBTTBCS--S-----C
T ss_pred HhCCCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCC-cEEEEecccccCC--C-----C
Confidence 334556789999999999999999998755789999999999999999999998875 7999999987642 1 2
Q ss_pred CCceeEEEEcCC---ccchHHHHHHHHhcCCCCeEEEEeccccc
Q 025824 154 HGSFDFIFVDAD---KDNYLNYHKRLIELVKVGGVIGYDNTLWN 194 (247)
Q Consensus 154 ~~~fD~v~id~~---~~~~~~~l~~~~~~L~~gG~lv~d~~~~~ 194 (247)
.++||+|++... ..+...+++.+.+.|+|||.+++.+....
T Consensus 104 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 147 (219)
T 3dh0_A 104 DNTVDFIFMAFTFHELSEPLKFLEELKRVAKPFAYLAIIDWKKE 147 (219)
T ss_dssp SSCEEEEEEESCGGGCSSHHHHHHHHHHHEEEEEEEEEEEECSS
T ss_pred CCCeeEEEeehhhhhcCCHHHHHHHHHHHhCCCeEEEEEEeccc
Confidence 578999998765 23457899999999999999998765433
No 73
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.56 E-value=8.2e-14 Score=109.18 Aligned_cols=112 Identities=17% Similarity=0.100 Sum_probs=93.2
Q ss_pred CHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhh
Q 025824 64 SADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPV 143 (247)
Q Consensus 64 ~~~~~~~l~~l~~~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~ 143 (247)
.+.....+.......+..+|||+|||+|..+..++. +..+++++|+++.+++.+++++...++ ++++++++|+.+.
T Consensus 20 ~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~---~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~~d~~~~ 95 (183)
T 2yxd_A 20 KEEIRAVSIGKLNLNKDDVVVDVGCGSGGMTVEIAK---RCKFVYAIDYLDGAIEVTKQNLAKFNI-KNCQIIKGRAEDV 95 (183)
T ss_dssp CHHHHHHHHHHHCCCTTCEEEEESCCCSHHHHHHHT---TSSEEEEEECSHHHHHHHHHHHHHTTC-CSEEEEESCHHHH
T ss_pred HHHHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHHcCC-CcEEEEECCcccc
Confidence 345555555555556778999999999999999998 378999999999999999999999887 5799999998763
Q ss_pred hHHHHhhhcCCCceeEEEEcCCccchHHHHHHHHhcCCCCeEEEEec
Q 025824 144 LDLLIQDEKNHGSFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYDN 190 (247)
Q Consensus 144 l~~l~~~~~~~~~fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv~d~ 190 (247)
++ .++||+|+++.. ......++.+.+. |||.+++..
T Consensus 96 ~~--------~~~~D~i~~~~~-~~~~~~l~~~~~~--~gG~l~~~~ 131 (183)
T 2yxd_A 96 LD--------KLEFNKAFIGGT-KNIEKIIEILDKK--KINHIVANT 131 (183)
T ss_dssp GG--------GCCCSEEEECSC-SCHHHHHHHHHHT--TCCEEEEEE
T ss_pred cc--------CCCCcEEEECCc-ccHHHHHHHHhhC--CCCEEEEEe
Confidence 32 368999999887 7778888988888 999999864
No 74
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.56 E-value=1.6e-14 Score=124.44 Aligned_cols=106 Identities=16% Similarity=0.207 Sum_probs=87.8
Q ss_pred hcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHH--cCC-CCcEEEEEecchhhhHHHHhhhcC
Q 025824 77 LVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQK--AGV-AHKIDFREGPALPVLDLLIQDEKN 153 (247)
Q Consensus 77 ~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~--~g~-~~~i~~~~gd~~~~l~~l~~~~~~ 153 (247)
..++++|||||||+|..+..+++..+ ..+|+++|+++++++.|++++.. .++ .++++++++|+.+.++..
T Consensus 114 ~~~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~------ 186 (321)
T 2pt6_A 114 SKEPKNVLVVGGGDGGIIRELCKYKS-VENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENV------ 186 (321)
T ss_dssp SSSCCEEEEEECTTCHHHHHHTTCTT-CCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHC------
T ss_pred CCCCCEEEEEcCCccHHHHHHHHcCC-CCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhc------
Confidence 35678999999999999999997644 68999999999999999999875 233 368999999998776542
Q ss_pred CCceeEEEEcCCc-----c-ch-HHHHHHHHhcCCCCeEEEEe
Q 025824 154 HGSFDFIFVDADK-----D-NY-LNYHKRLIELVKVGGVIGYD 189 (247)
Q Consensus 154 ~~~fD~v~id~~~-----~-~~-~~~l~~~~~~L~~gG~lv~d 189 (247)
.++||+|++|... . .+ ..+++.+.+.|+|||++++.
T Consensus 187 ~~~fDvIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 229 (321)
T 2pt6_A 187 TNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQ 229 (321)
T ss_dssp CSCEEEEEEECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCceEEEECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 5789999998741 1 12 68899999999999999986
No 75
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.55 E-value=1.5e-14 Score=122.32 Aligned_cols=108 Identities=20% Similarity=0.243 Sum_probs=91.6
Q ss_pred hhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCC
Q 025824 76 KLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHG 155 (247)
Q Consensus 76 ~~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~ 155 (247)
...++.+|||||||+|..+..+++.+|.+.+|+++|+++.+++.|++++...+. +++++++|+.+... .+
T Consensus 19 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~--------~~ 88 (284)
T 3gu3_A 19 KITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPY--DSEFLEGDATEIEL--------ND 88 (284)
T ss_dssp CCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSS--EEEEEESCTTTCCC--------SS
T ss_pred ccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCC--ceEEEEcchhhcCc--------CC
Confidence 445778999999999999999999887568999999999999999999987664 79999999986421 46
Q ss_pred ceeEEEEcCC---ccchHHHHHHHHhcCCCCeEEEEecccc
Q 025824 156 SFDFIFVDAD---KDNYLNYHKRLIELVKVGGVIGYDNTLW 193 (247)
Q Consensus 156 ~fD~v~id~~---~~~~~~~l~~~~~~L~~gG~lv~d~~~~ 193 (247)
+||+|++... ..+....++.+.+.|+|||++++.+..|
T Consensus 89 ~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 129 (284)
T 3gu3_A 89 KYDIAICHAFLLHMTTPETMLQKMIHSVKKGGKIICFEPHW 129 (284)
T ss_dssp CEEEEEEESCGGGCSSHHHHHHHHHHTEEEEEEEEEEECCH
T ss_pred CeeEEEECChhhcCCCHHHHHHHHHHHcCCCCEEEEEecch
Confidence 8999998765 3455789999999999999999876653
No 76
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.55 E-value=4.3e-14 Score=122.36 Aligned_cols=120 Identities=14% Similarity=0.174 Sum_probs=91.9
Q ss_pred cCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcC----------CCCc
Q 025824 63 TSADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAG----------VAHK 132 (247)
Q Consensus 63 ~~~~~~~~l~~l~~~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g----------~~~~ 132 (247)
..+.....+...+...+..+|||+|||+|+.+..+++..++.++|+++|+++.+++.|++++...+ ...+
T Consensus 89 ~~~~~~~~~l~~l~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~ 168 (336)
T 2b25_A 89 TFPKDINMILSMMDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDN 168 (336)
T ss_dssp CCHHHHHHHHHHHTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCC
T ss_pred cCHHHHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCc
Confidence 335545555555566778899999999999999999986547899999999999999999998643 2357
Q ss_pred EEEEEecchhhhHHHHhhhcCCCceeEEEEcCCccchHHHHHHHHhcCCCCeEEEEe
Q 025824 133 IDFREGPALPVLDLLIQDEKNHGSFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYD 189 (247)
Q Consensus 133 i~~~~gd~~~~l~~l~~~~~~~~~fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv~d 189 (247)
++++.+|+.+.+..+ ..++||+|++|... ....++.+.+.|+|||.+++-
T Consensus 169 v~~~~~d~~~~~~~~-----~~~~fD~V~~~~~~--~~~~l~~~~~~LkpgG~lv~~ 218 (336)
T 2b25_A 169 VDFIHKDISGATEDI-----KSLTFDAVALDMLN--PHVTLPVFYPHLKHGGVCAVY 218 (336)
T ss_dssp EEEEESCTTCCC------------EEEEEECSSS--TTTTHHHHGGGEEEEEEEEEE
T ss_pred eEEEECChHHccccc-----CCCCeeEEEECCCC--HHHHHHHHHHhcCCCcEEEEE
Confidence 999999998765333 14579999998653 334788999999999999963
No 77
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.55 E-value=5.5e-15 Score=118.92 Aligned_cols=119 Identities=13% Similarity=0.174 Sum_probs=74.8
Q ss_pred CHHHHHHHHHHHhh----cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEec
Q 025824 64 SADEGQFLNMLLKL----VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGP 139 (247)
Q Consensus 64 ~~~~~~~l~~l~~~----~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd 139 (247)
.+....++..++.. .++.+|||+|||+|..+..+++..+ +.+++++|+++.+++.|++++...+. +++++++|
T Consensus 11 ~~~~~~~~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d 87 (215)
T 4dzr_A 11 RPDTEVLVEEAIRFLKRMPSGTRVIDVGTGSGCIAVSIALACP-GVSVTAVDLSMDALAVARRNAERFGA--VVDWAAAD 87 (215)
T ss_dssp CHHHHHHHHHHHHHHTTCCTTEEEEEEESSBCHHHHHHHHHCT-TEEEEEEECC---------------------CCHHH
T ss_pred CccHHHHHHHHHHHhhhcCCCCEEEEecCCHhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHHhCC--ceEEEEcc
Confidence 35566666665554 4667999999999999999999876 78999999999999999999998876 78999999
Q ss_pred chhhhHHHHhhhcCCCceeEEEEcCCcc-----------------------------chHHHHHHHHhcCCCCeE-EEE
Q 025824 140 ALPVLDLLIQDEKNHGSFDFIFVDADKD-----------------------------NYLNYHKRLIELVKVGGV-IGY 188 (247)
Q Consensus 140 ~~~~l~~l~~~~~~~~~fD~v~id~~~~-----------------------------~~~~~l~~~~~~L~~gG~-lv~ 188 (247)
+.+.++.... ..++||+|+++.+.. .+..+++.+.++|+|||+ +++
T Consensus 88 ~~~~~~~~~~---~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 163 (215)
T 4dzr_A 88 GIEWLIERAE---RGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFL 163 (215)
T ss_dssp HHHHHHHHHH---TTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEE
T ss_pred hHhhhhhhhh---ccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEE
Confidence 9875443111 137999999975410 015666777799999999 655
No 78
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.55 E-value=4.9e-14 Score=118.98 Aligned_cols=104 Identities=15% Similarity=0.195 Sum_probs=88.3
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCcee
Q 025824 79 NAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFD 158 (247)
Q Consensus 79 ~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~fD 158 (247)
++.+|||||||+|..+..++.. +.+|+++|+++.+++.|++++...++..+++++++|+.+..+. ..++||
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~------~~~~fD 138 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAER---GHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASH------LETPVD 138 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGG------CSSCEE
T ss_pred CCCEEEEeCCcchHHHHHHHHC---CCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhh------cCCCce
Confidence 3569999999999999999986 5799999999999999999999988878899999999766422 257999
Q ss_pred EEEEcCC---ccchHHHHHHHHhcCCCCeEEEEecc
Q 025824 159 FIFVDAD---KDNYLNYHKRLIELVKVGGVIGYDNT 191 (247)
Q Consensus 159 ~v~id~~---~~~~~~~l~~~~~~L~~gG~lv~d~~ 191 (247)
+|++... ..+...+++.+.++|+|||++++...
T Consensus 139 ~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 174 (285)
T 4htf_A 139 LILFHAVLEWVADPRSVLQTLWSVLRPGGVLSLMFY 174 (285)
T ss_dssp EEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EEEECchhhcccCHHHHHHHHHHHcCCCeEEEEEEe
Confidence 9998765 24567899999999999999998653
No 79
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.55 E-value=1.6e-14 Score=122.88 Aligned_cols=114 Identities=14% Similarity=0.284 Sum_probs=88.1
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCC---------------------------
Q 025824 78 VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVA--------------------------- 130 (247)
Q Consensus 78 ~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~--------------------------- 130 (247)
.++++|||||||+|..++.++..++ ..+|+++|+++.+++.|++++...+..
T Consensus 45 ~~~~~VLDiGCG~G~~~~~la~~~~-~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (292)
T 3g07_A 45 FRGRDVLDLGCNVGHLTLSIACKWG-PSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKR 123 (292)
T ss_dssp TTTSEEEEESCTTCHHHHHHHHHTC-CSEEEEEESCHHHHHHHHHTC---------------------------------
T ss_pred cCCCcEEEeCCCCCHHHHHHHHHcC-CCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccc
Confidence 3678999999999999999999986 679999999999999999987765422
Q ss_pred ------------------------------CcEEEEEecchhhhHHHHhhhcCCCceeEEEEcCCc---------cchHH
Q 025824 131 ------------------------------HKIDFREGPALPVLDLLIQDEKNHGSFDFIFVDADK---------DNYLN 171 (247)
Q Consensus 131 ------------------------------~~i~~~~gd~~~~l~~l~~~~~~~~~fD~v~id~~~---------~~~~~ 171 (247)
.+++++++|..+....+... ..++||+|++...- .....
T Consensus 124 ~~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~--~~~~fD~I~~~~vl~~ihl~~~~~~~~~ 201 (292)
T 3g07_A 124 SCFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEA--QTPEYDVVLCLSLTKWVHLNWGDEGLKR 201 (292)
T ss_dssp ------------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTT--CCCCEEEEEEESCHHHHHHHHHHHHHHH
T ss_pred ccccchhhhccCccccccccccccccccccccceEEecccccCccccccc--cCCCcCEEEEChHHHHhhhcCCHHHHHH
Confidence 58999999987543332211 25799999987652 14567
Q ss_pred HHHHHHhcCCCCeEEEEeccccc
Q 025824 172 YHKRLIELVKVGGVIGYDNTLWN 194 (247)
Q Consensus 172 ~l~~~~~~L~~gG~lv~d~~~~~ 194 (247)
+++.+.++|+|||++++..--|.
T Consensus 202 ~l~~~~~~LkpGG~lil~~~~~~ 224 (292)
T 3g07_A 202 MFRRIYRHLRPGGILVLEPQPWS 224 (292)
T ss_dssp HHHHHHHHEEEEEEEEEECCCHH
T ss_pred HHHHHHHHhCCCcEEEEecCCch
Confidence 89999999999999999765554
No 80
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.55 E-value=3.4e-14 Score=115.95 Aligned_cols=120 Identities=15% Similarity=0.221 Sum_probs=91.7
Q ss_pred CHHHHHHHHHHH--hhcCCCEEEEEcccccHHHHHHHhhCC----CCCEEEEEeCCcchHHHHHHHHHHcCC----CCcE
Q 025824 64 SADEGQFLNMLL--KLVNAKNTMEIGVYTGYSLLATALALP----DDGKILAMDINRENYELGLPVIQKAGV----AHKI 133 (247)
Q Consensus 64 ~~~~~~~l~~l~--~~~~~~~vLEiG~g~G~st~~la~~~~----~~~~v~~iD~~~~~~~~a~~~~~~~g~----~~~i 133 (247)
.+.....+...+ ...+..+|||||||+|+.+..+++... +.++|+++|+++++++.|++++...++ .+++
T Consensus 63 ~p~~~~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v 142 (227)
T 2pbf_A 63 APHMHALSLKRLINVLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNF 142 (227)
T ss_dssp CHHHHHHHHHHHTTTSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTE
T ss_pred ChHHHHHHHHHHHhhCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCE
Confidence 344444433333 345668999999999999999999874 468999999999999999999998873 3679
Q ss_pred EEEEecchhhhHHHHhhhcCCCceeEEEEcCCccchHHHHHHHHhcCCCCeEEEEe
Q 025824 134 DFREGPALPVLDLLIQDEKNHGSFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYD 189 (247)
Q Consensus 134 ~~~~gd~~~~l~~l~~~~~~~~~fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv~d 189 (247)
+++.+|+.+..+.... ..++||+|+++...... ++.+.+.|+|||++++.
T Consensus 143 ~~~~~d~~~~~~~~~~---~~~~fD~I~~~~~~~~~---~~~~~~~LkpgG~lv~~ 192 (227)
T 2pbf_A 143 KIIHKNIYQVNEEEKK---ELGLFDAIHVGASASEL---PEILVDLLAENGKLIIP 192 (227)
T ss_dssp EEEECCGGGCCHHHHH---HHCCEEEEEECSBBSSC---CHHHHHHEEEEEEEEEE
T ss_pred EEEECChHhcccccCc---cCCCcCEEEECCchHHH---HHHHHHhcCCCcEEEEE
Confidence 9999999875421100 13689999998875443 47788999999999974
No 81
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.55 E-value=2e-14 Score=121.11 Aligned_cols=116 Identities=22% Similarity=0.323 Sum_probs=96.6
Q ss_pred HHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhh
Q 025824 65 ADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVL 144 (247)
Q Consensus 65 ~~~~~~l~~l~~~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l 144 (247)
+.....+...+...+..+|||+|||+|..+..+++.+.+.++++++|+++++++.|++++...++.++++++.+|+.+.+
T Consensus 98 ~~~~~~i~~~~~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 177 (277)
T 1o54_A 98 PKDSSFIAMMLDVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEGF 177 (277)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCC
T ss_pred HHHHHHHHHHhCCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHcc
Confidence 45555555555666778999999999999999999865578999999999999999999999888778999999997763
Q ss_pred HHHHhhhcCCCceeEEEEcCCccchHHHHHHHHhcCCCCeEEEEec
Q 025824 145 DLLIQDEKNHGSFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYDN 190 (247)
Q Consensus 145 ~~l~~~~~~~~~fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv~d~ 190 (247)
+ .++||+|++|.+ ....+++.+.+.|+|||.+++..
T Consensus 178 ~--------~~~~D~V~~~~~--~~~~~l~~~~~~L~pgG~l~~~~ 213 (277)
T 1o54_A 178 D--------EKDVDALFLDVP--DPWNYIDKCWEALKGGGRFATVC 213 (277)
T ss_dssp S--------CCSEEEEEECCS--CGGGTHHHHHHHEEEEEEEEEEE
T ss_pred c--------CCccCEEEECCc--CHHHHHHHHHHHcCCCCEEEEEe
Confidence 2 468999999764 34577899999999999999753
No 82
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.54 E-value=7.6e-14 Score=120.81 Aligned_cols=116 Identities=16% Similarity=0.139 Sum_probs=92.4
Q ss_pred HHHHHh-hcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCC-cEEEEEecchhhhHHHH
Q 025824 71 LNMLLK-LVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAH-KIDFREGPALPVLDLLI 148 (247)
Q Consensus 71 l~~l~~-~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~-~i~~~~gd~~~~l~~l~ 148 (247)
+...+. ..++.+|||+|||+|..++.++.. +.+|+++|+++.+++.|++|++..++.+ +++++++|+.+.++.+.
T Consensus 144 l~~~~~~~~~~~~VLDlgcGtG~~sl~la~~---ga~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~ 220 (332)
T 2igt_A 144 LKNAVETADRPLKVLNLFGYTGVASLVAAAA---GAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREE 220 (332)
T ss_dssp HHHHHHHSSSCCEEEEETCTTCHHHHHHHHT---TCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHH
T ss_pred HHHHHHhcCCCCcEEEcccccCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHH
Confidence 444443 235679999999999999999984 4599999999999999999999999866 59999999988776542
Q ss_pred hhhcCCCceeEEEEcCCc-------------cchHHHHHHHHhcCCCCeEEEEeccc
Q 025824 149 QDEKNHGSFDFIFVDADK-------------DNYLNYHKRLIELVKVGGVIGYDNTL 192 (247)
Q Consensus 149 ~~~~~~~~fD~v~id~~~-------------~~~~~~l~~~~~~L~~gG~lv~d~~~ 192 (247)
.. .++||+|++|.+. ..+..++..+.++|+|||++++....
T Consensus 221 ~~---~~~fD~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~ 274 (332)
T 2igt_A 221 RR---GSTYDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAY 274 (332)
T ss_dssp HH---TCCBSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEEC
T ss_pred hc---CCCceEEEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECC
Confidence 21 3689999998762 12567888889999999998775543
No 83
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.54 E-value=5.4e-14 Score=118.00 Aligned_cols=115 Identities=23% Similarity=0.269 Sum_probs=94.7
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCce
Q 025824 78 VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSF 157 (247)
Q Consensus 78 ~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~f 157 (247)
.++.+|||||||+|..+..+++..| +.+++++|+++.+++.+++++...++. +++++.+|+.+... ..++|
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~~d~~~~~~-------~~~~f 106 (276)
T 3mgg_A 36 PPGAKVLEAGCGIGAQTVILAKNNP-DAEITSIDISPESLEKARENTEKNGIK-NVKFLQANIFSLPF-------EDSSF 106 (276)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHHCT-TSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCGGGCCS-------CTTCE
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCC-CcEEEEcccccCCC-------CCCCe
Confidence 4678999999999999999999876 789999999999999999999998874 69999999976421 25799
Q ss_pred eEEEEcCC---ccchHHHHHHHHhcCCCCeEEEEecccccccccCCC
Q 025824 158 DFIFVDAD---KDNYLNYHKRLIELVKVGGVIGYDNTLWNGSVVAPP 201 (247)
Q Consensus 158 D~v~id~~---~~~~~~~l~~~~~~L~~gG~lv~d~~~~~g~~~~~~ 201 (247)
|+|++... ..+....++.+.++|+|||++++.+..+......|.
T Consensus 107 D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~ 153 (276)
T 3mgg_A 107 DHIFVCFVLEHLQSPEEALKSLKKVLKPGGTITVIEGDHGSCYFHPE 153 (276)
T ss_dssp EEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECGGGCEEESC
T ss_pred eEEEEechhhhcCCHHHHHHHHHHHcCCCcEEEEEEcCCCCceECCC
Confidence 99998764 245568899999999999999997765544444444
No 84
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.54 E-value=4.4e-14 Score=118.29 Aligned_cols=119 Identities=15% Similarity=0.286 Sum_probs=96.2
Q ss_pred HHHHHHHHHhh---cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhh
Q 025824 67 EGQFLNMLLKL---VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPV 143 (247)
Q Consensus 67 ~~~~l~~l~~~---~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~ 143 (247)
...+...++.. .+..+|||||||+|..+..+++.. +++|+++|+++.+++.+++++...++.++++++.+|+.+.
T Consensus 46 ~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 123 (273)
T 3bus_A 46 TDRLTDEMIALLDVRSGDRVLDVGCGIGKPAVRLATAR--DVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDL 123 (273)
T ss_dssp HHHHHHHHHHHSCCCTTCEEEEESCTTSHHHHHHHHHS--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSC
T ss_pred HHHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccC
Confidence 34444444443 356799999999999999999875 5799999999999999999999999888999999999763
Q ss_pred hHHHHhhhcCCCceeEEEEcCC---ccchHHHHHHHHhcCCCCeEEEEeccccc
Q 025824 144 LDLLIQDEKNHGSFDFIFVDAD---KDNYLNYHKRLIELVKVGGVIGYDNTLWN 194 (247)
Q Consensus 144 l~~l~~~~~~~~~fD~v~id~~---~~~~~~~l~~~~~~L~~gG~lv~d~~~~~ 194 (247)
+ + ..++||+|++... ..+...+++.+.+.|+|||.+++.+....
T Consensus 124 -~-~-----~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~ 170 (273)
T 3bus_A 124 -P-F-----EDASFDAVWALESLHHMPDRGRALREMARVLRPGGTVAIADFVLL 170 (273)
T ss_dssp -C-S-----CTTCEEEEEEESCTTTSSCHHHHHHHHHTTEEEEEEEEEEEEEES
T ss_pred -C-C-----CCCCccEEEEechhhhCCCHHHHHHHHHHHcCCCeEEEEEEeecc
Confidence 2 1 2578999997654 23567899999999999999998776543
No 85
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.54 E-value=3.2e-14 Score=116.23 Aligned_cols=102 Identities=18% Similarity=0.253 Sum_probs=84.5
Q ss_pred hcCCCEEEEEccc-ccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCC
Q 025824 77 LVNAKNTMEIGVY-TGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHG 155 (247)
Q Consensus 77 ~~~~~~vLEiG~g-~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~ 155 (247)
..+..+|||+||| +|..++.+++.. +.+|+++|+++.+++.|++++...++ +++++++|+.... .+ ..+
T Consensus 53 ~~~~~~vLDlG~G~~G~~~~~la~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~-~~-----~~~ 122 (230)
T 3evz_A 53 LRGGEVALEIGTGHTAMMALMAEKFF--NCKVTATEVDEEFFEYARRNIERNNS--NVRLVKSNGGIIK-GV-----VEG 122 (230)
T ss_dssp CCSSCEEEEECCTTTCHHHHHHHHHH--CCEEEEEECCHHHHHHHHHHHHHTTC--CCEEEECSSCSST-TT-----CCS
T ss_pred cCCCCEEEEcCCCHHHHHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHhCC--CcEEEeCCchhhh-hc-----ccC
Confidence 3467899999999 999999999875 57999999999999999999999887 7999999974322 22 147
Q ss_pred ceeEEEEcCCcc----------------------chHHHHHHHHhcCCCCeEEEE
Q 025824 156 SFDFIFVDADKD----------------------NYLNYHKRLIELVKVGGVIGY 188 (247)
Q Consensus 156 ~fD~v~id~~~~----------------------~~~~~l~~~~~~L~~gG~lv~ 188 (247)
+||+|+++.+.. .+..+++.+.++|+|||.+++
T Consensus 123 ~fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 177 (230)
T 3evz_A 123 TFDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVAL 177 (230)
T ss_dssp CEEEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEE
T ss_pred ceeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEE
Confidence 899999985521 136788999999999999997
No 86
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.54 E-value=2.7e-14 Score=116.93 Aligned_cols=111 Identities=14% Similarity=0.132 Sum_probs=91.5
Q ss_pred HHHHHhhcC-CCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHh
Q 025824 71 LNMLLKLVN-AKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQ 149 (247)
Q Consensus 71 l~~l~~~~~-~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~ 149 (247)
|..+....+ ..+|+|||||+|+.++.++...+ ..+|+++|+++.+++.|++|++.+|+.++|+++++|+.+.+..
T Consensus 12 L~~i~~~v~~g~~VlDIGtGsG~l~i~la~~~~-~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~--- 87 (230)
T 3lec_A 12 LQKVANYVPKGARLLDVGSDHAYLPIFLLQMGY-CDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEE--- 87 (230)
T ss_dssp HHHHHTTSCTTEEEEEETCSTTHHHHHHHHTTC-EEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG---
T ss_pred HHHHHHhCCCCCEEEEECCchHHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhcccc---
Confidence 555555544 46899999999999999998754 6799999999999999999999999988999999999876542
Q ss_pred hhcCCCceeEEEEcCC-ccchHHHHHHHHhcCCCCeEEEEe
Q 025824 150 DEKNHGSFDFIFVDAD-KDNYLNYHKRLIELVKVGGVIGYD 189 (247)
Q Consensus 150 ~~~~~~~fD~v~id~~-~~~~~~~l~~~~~~L~~gG~lv~d 189 (247)
.++||+|++.+. ..-...+++.....|+++|.+|+.
T Consensus 88 ----~~~~D~IviaGmGg~lI~~IL~~~~~~l~~~~~lIlq 124 (230)
T 3lec_A 88 ----ADNIDTITICGMGGRLIADILNNDIDKLQHVKTLVLQ 124 (230)
T ss_dssp ----GGCCCEEEEEEECHHHHHHHHHHTGGGGTTCCEEEEE
T ss_pred ----ccccCEEEEeCCchHHHHHHHHHHHHHhCcCCEEEEE
Confidence 247999887544 344677888888899999999874
No 87
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.54 E-value=7.4e-15 Score=125.47 Aligned_cols=109 Identities=13% Similarity=0.088 Sum_probs=90.0
Q ss_pred hcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCc
Q 025824 77 LVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGS 156 (247)
Q Consensus 77 ~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~ 156 (247)
..++.+|||||||+|..+..++....++++|+++|+++.+++.|++++...++.++++++++|+.+... .++
T Consensus 116 l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~--------~~~ 187 (305)
T 3ocj_A 116 LRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDT--------REG 187 (305)
T ss_dssp CCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCC--------CSC
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCc--------cCC
Confidence 356789999999999999998744344789999999999999999999999988889999999976421 378
Q ss_pred eeEEEEcCC------ccchHHHHHHHHhcCCCCeEEEEecccc
Q 025824 157 FDFIFVDAD------KDNYLNYHKRLIELVKVGGVIGYDNTLW 193 (247)
Q Consensus 157 fD~v~id~~------~~~~~~~l~~~~~~L~~gG~lv~d~~~~ 193 (247)
||+|++... ......+++.+.+.|+|||++++.+...
T Consensus 188 fD~v~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 230 (305)
T 3ocj_A 188 YDLLTSNGLNIYEPDDARVTELYRRFWQALKPGGALVTSFLTP 230 (305)
T ss_dssp EEEEECCSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCC
T ss_pred eEEEEECChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCC
Confidence 999998663 2223357899999999999999987553
No 88
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.54 E-value=2.1e-14 Score=120.98 Aligned_cols=116 Identities=16% Similarity=0.123 Sum_probs=95.4
Q ss_pred HHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhh
Q 025824 65 ADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVL 144 (247)
Q Consensus 65 ~~~~~~l~~l~~~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l 144 (247)
....+.+..+....+..+|||+|||+|..++.+++..+ .++|+++|+++++++.|+++++.+++. +++++++|+.+.
T Consensus 105 ~~~~e~~~~~~~~~~~~~VLDlgcG~G~~s~~la~~~~-~~~V~~vD~s~~av~~a~~n~~~n~l~-~~~~~~~d~~~~- 181 (272)
T 3a27_A 105 GNIEERKRMAFISNENEVVVDMFAGIGYFTIPLAKYSK-PKLVYAIEKNPTAYHYLCENIKLNKLN-NVIPILADNRDV- 181 (272)
T ss_dssp GGHHHHHHHHTSCCTTCEEEETTCTTTTTHHHHHHHTC-CSEEEEEECCHHHHHHHHHHHHHTTCS-SEEEEESCGGGC-
T ss_pred CchHHHHHHHHhcCCCCEEEEecCcCCHHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHHcCCC-CEEEEECChHHc-
Confidence 33344444444445678999999999999999999865 679999999999999999999999884 588999999876
Q ss_pred HHHHhhhcCCCceeEEEEcCCccchHHHHHHHHhcCCCCeEEEEecc
Q 025824 145 DLLIQDEKNHGSFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYDNT 191 (247)
Q Consensus 145 ~~l~~~~~~~~~fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv~d~~ 191 (247)
+. .++||+|++|.+. ....++..+.+.|+|||++++...
T Consensus 182 ~~-------~~~~D~Vi~d~p~-~~~~~l~~~~~~LkpgG~l~~s~~ 220 (272)
T 3a27_A 182 EL-------KDVADRVIMGYVH-KTHKFLDKTFEFLKDRGVIHYHET 220 (272)
T ss_dssp CC-------TTCEEEEEECCCS-SGGGGHHHHHHHEEEEEEEEEEEE
T ss_pred Cc-------cCCceEEEECCcc-cHHHHHHHHHHHcCCCCEEEEEEc
Confidence 42 3689999999875 667788999999999999997644
No 89
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.54 E-value=7.7e-14 Score=118.67 Aligned_cols=110 Identities=14% Similarity=0.139 Sum_probs=87.8
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHc-CCCCcEEEEEecchhhhHHHHhhhcCCCc
Q 025824 78 VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKA-GVAHKIDFREGPALPVLDLLIQDEKNHGS 156 (247)
Q Consensus 78 ~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~-g~~~~i~~~~gd~~~~l~~l~~~~~~~~~ 156 (247)
.++.+|||||||+|..+..+++.+++..+|+++|+++.+++.|++++... +...+++++++|+.+... ........++
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~~~~~~~ 113 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKF-LGADSVDKQK 113 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGG-GCTTTTTSSC
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCc-cccccccCCC
Confidence 36789999999999999999987744899999999999999999999887 555789999999976421 1000000278
Q ss_pred eeEEEEcCC--ccchHHHHHHHHhcCCCCeEEEE
Q 025824 157 FDFIFVDAD--KDNYLNYHKRLIELVKVGGVIGY 188 (247)
Q Consensus 157 fD~v~id~~--~~~~~~~l~~~~~~L~~gG~lv~ 188 (247)
||+|++... .-+...+++.+.+.|+|||+|++
T Consensus 114 fD~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 114 IDMITAVECAHWFDFEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp EEEEEEESCGGGSCHHHHHHHHHHHEEEEEEEEE
T ss_pred eeEEeHhhHHHHhCHHHHHHHHHHhcCCCcEEEE
Confidence 999998754 12678899999999999999988
No 90
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.54 E-value=3.7e-14 Score=114.67 Aligned_cols=115 Identities=22% Similarity=0.241 Sum_probs=92.1
Q ss_pred CHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhh
Q 025824 64 SADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPV 143 (247)
Q Consensus 64 ~~~~~~~l~~l~~~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~ 143 (247)
.+.....+...+...+..+|||+|||+|..+..+++..++..+|+++|+++++++.+++++...++. +++++.+|+.+.
T Consensus 62 ~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~ 140 (215)
T 2yxe_A 62 AIHMVGMMCELLDLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYD-NVIVIVGDGTLG 140 (215)
T ss_dssp CHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCT-TEEEEESCGGGC
T ss_pred cHHHHHHHHHhhCCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-CeEEEECCcccC
Confidence 3555555555555567789999999999999999998744689999999999999999999988874 599999998654
Q ss_pred hHHHHhhhcCCCceeEEEEcCCccchHHHHHHHHhcCCCCeEEEEe
Q 025824 144 LDLLIQDEKNHGSFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYD 189 (247)
Q Consensus 144 l~~l~~~~~~~~~fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv~d 189 (247)
++. .++||+|+++....+.. +.+.+.|+|||.+++.
T Consensus 141 ~~~-------~~~fD~v~~~~~~~~~~---~~~~~~L~pgG~lv~~ 176 (215)
T 2yxe_A 141 YEP-------LAPYDRIYTTAAGPKIP---EPLIRQLKDGGKLLMP 176 (215)
T ss_dssp CGG-------GCCEEEEEESSBBSSCC---HHHHHTEEEEEEEEEE
T ss_pred CCC-------CCCeeEEEECCchHHHH---HHHHHHcCCCcEEEEE
Confidence 432 36899999987654443 5788999999999975
No 91
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.54 E-value=3.7e-14 Score=117.00 Aligned_cols=105 Identities=18% Similarity=0.211 Sum_probs=84.5
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHH------cCCCCcEEEEEecchhhhHHHHhhh
Q 025824 78 VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQK------AGVAHKIDFREGPALPVLDLLIQDE 151 (247)
Q Consensus 78 ~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~------~g~~~~i~~~~gd~~~~l~~l~~~~ 151 (247)
.+..+|||||||+|..+..++...| +..++++|+++.+++.|++++.. .+. .+++++++|+.+.++...
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~p-~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~-~nv~~~~~d~~~~l~~~~--- 119 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLFP-DTLILGLEIRVKVSDYVQDRIRALRAAPAGGF-QNIACLRSNAMKHLPNFF--- 119 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGST-TSEEEEEESCHHHHHHHHHHHHHHHHSTTCCC-TTEEEEECCTTTCHHHHC---
T ss_pred CCCCeEEEEccCCcHHHHHHHHHCC-CCeEEEEECCHHHHHHHHHHHHHHHHHHhcCC-CeEEEEECcHHHhhhhhC---
Confidence 4567899999999999999999876 78999999999999999988764 334 579999999987665432
Q ss_pred cCCCceeEEEEcCCccc-----------hHHHHHHHHhcCCCCeEEEE
Q 025824 152 KNHGSFDFIFVDADKDN-----------YLNYHKRLIELVKVGGVIGY 188 (247)
Q Consensus 152 ~~~~~fD~v~id~~~~~-----------~~~~l~~~~~~L~~gG~lv~ 188 (247)
..++||.|++...... ...+++.+.+.|+|||.|++
T Consensus 120 -~~~~~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~ 166 (235)
T 3ckk_A 120 -YKGQLTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYT 166 (235)
T ss_dssp -CTTCEEEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEE
T ss_pred -CCcCeeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEE
Confidence 2578999988643111 25789999999999999986
No 92
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.54 E-value=2.3e-14 Score=121.05 Aligned_cols=104 Identities=14% Similarity=0.142 Sum_probs=89.8
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCce
Q 025824 78 VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSF 157 (247)
Q Consensus 78 ~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~f 157 (247)
.+..+|||+|||+|..++.+++..+ . +|+++|+++.+++.|+++++.+++.++++++++|+.+... .++|
T Consensus 124 ~~~~~VLDlgcG~G~~~~~la~~~~-~-~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~--------~~~f 193 (278)
T 2frn_A 124 KPDELVVDMFAGIGHLSLPIAVYGK-A-KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG--------ENIA 193 (278)
T ss_dssp CTTCEEEETTCTTTTTHHHHHHHTC-C-EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC--------CSCE
T ss_pred CCCCEEEEecccCCHHHHHHHHhCC-C-EEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcc--------cCCc
Confidence 3478999999999999999998754 2 8999999999999999999999998889999999987654 4689
Q ss_pred eEEEEcCCccchHHHHHHHHhcCCCCeEEEEeccc
Q 025824 158 DFIFVDADKDNYLNYHKRLIELVKVGGVIGYDNTL 192 (247)
Q Consensus 158 D~v~id~~~~~~~~~l~~~~~~L~~gG~lv~d~~~ 192 (247)
|+|++|.+. ....+++.+.+.|+|||++++....
T Consensus 194 D~Vi~~~p~-~~~~~l~~~~~~LkpgG~l~~~~~~ 227 (278)
T 2frn_A 194 DRILMGYVV-RTHEFIPKALSIAKDGAIIHYHNTV 227 (278)
T ss_dssp EEEEECCCS-SGGGGHHHHHHHEEEEEEEEEEEEE
T ss_pred cEEEECCch-hHHHHHHHHHHHCCCCeEEEEEEee
Confidence 999998773 3467888999999999999986543
No 93
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.54 E-value=2.2e-14 Score=117.93 Aligned_cols=116 Identities=19% Similarity=0.189 Sum_probs=87.6
Q ss_pred HHHHHHHHhh--cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhH
Q 025824 68 GQFLNMLLKL--VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLD 145 (247)
Q Consensus 68 ~~~l~~l~~~--~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~ 145 (247)
..++..+... .+..+|||||||+|..+..+++.. ..+|+++|+++.+++.|+++....+ .+++++++|+.+.++
T Consensus 47 ~~~~~~l~~~~~~~~~~vLDiGcGtG~~~~~l~~~~--~~~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~ 122 (236)
T 1zx0_A 47 TPYMHALAAAASSKGGRVLEVGFGMAIAASKVQEAP--IDEHWIIECNDGVFQRLRDWAPRQT--HKVIPLKGLWEDVAP 122 (236)
T ss_dssp HHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHTSC--EEEEEEEECCHHHHHHHHHHGGGCS--SEEEEEESCHHHHGG
T ss_pred HHHHHHHHhhcCCCCCeEEEEeccCCHHHHHHHhcC--CCeEEEEcCCHHHHHHHHHHHHhcC--CCeEEEecCHHHhhc
Confidence 3344444333 356799999999999999997642 3499999999999999999887766 579999999987643
Q ss_pred HHHhhhcCCCceeEEEEcCC--------ccchHHHHHHHHhcCCCCeEEEEeccc
Q 025824 146 LLIQDEKNHGSFDFIFVDAD--------KDNYLNYHKRLIELVKVGGVIGYDNTL 192 (247)
Q Consensus 146 ~l~~~~~~~~~fD~v~id~~--------~~~~~~~l~~~~~~L~~gG~lv~d~~~ 192 (247)
.+ .+++||+|++|.. ......+++.+.++|||||++++-+..
T Consensus 123 ~~-----~~~~fD~V~~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~ 172 (236)
T 1zx0_A 123 TL-----PDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLT 172 (236)
T ss_dssp GS-----CTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHH
T ss_pred cc-----CCCceEEEEECCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEecC
Confidence 33 2578999998432 112235688899999999999986654
No 94
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.53 E-value=3.5e-14 Score=122.07 Aligned_cols=114 Identities=18% Similarity=0.279 Sum_probs=92.4
Q ss_pred HHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhh
Q 025824 65 ADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVL 144 (247)
Q Consensus 65 ~~~~~~l~~l~~~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l 144 (247)
+.....+...+...++.+|||||||+|..+..+++..+..++|+++|+++++++.|++++...|+.+ ++++.+|+.+.+
T Consensus 61 ~~~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~-v~~~~~d~~~~~ 139 (317)
T 1dl5_A 61 PSLMALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIEN-VIFVCGDGYYGV 139 (317)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCS-EEEEESCGGGCC
T ss_pred HHHHHHHHHhcCCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCC-eEEEECChhhcc
Confidence 3444444445555677899999999999999999886645889999999999999999999988854 999999998754
Q ss_pred HHHHhhhcCCCceeEEEEcCCccchHHHHHHHHhcCCCCeEEEEe
Q 025824 145 DLLIQDEKNHGSFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYD 189 (247)
Q Consensus 145 ~~l~~~~~~~~~fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv~d 189 (247)
+. .++||+|+++....+.. +.+.+.|+|||++++.
T Consensus 140 ~~-------~~~fD~Iv~~~~~~~~~---~~~~~~LkpgG~lvi~ 174 (317)
T 1dl5_A 140 PE-------FSPYDVIFVTVGVDEVP---ETWFTQLKEGGRVIVP 174 (317)
T ss_dssp GG-------GCCEEEEEECSBBSCCC---HHHHHHEEEEEEEEEE
T ss_pred cc-------CCCeEEEEEcCCHHHHH---HHHHHhcCCCcEEEEE
Confidence 42 46899999988755443 5677899999999985
No 95
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.53 E-value=3.6e-14 Score=114.31 Aligned_cols=115 Identities=12% Similarity=0.025 Sum_probs=83.9
Q ss_pred cCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcC-----------CCC
Q 025824 63 TSADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAG-----------VAH 131 (247)
Q Consensus 63 ~~~~~~~~l~~l~~~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g-----------~~~ 131 (247)
..+...+++..+ ...++.+|||+|||+|..+.+|++. +.+|+++|+++.+++.|++...... ...
T Consensus 7 ~~~~l~~~~~~l-~~~~~~~vLD~GCG~G~~~~~la~~---g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~ 82 (203)
T 1pjz_A 7 VNKDLQQYWSSL-NVVPGARVLVPLCGKSQDMSWLSGQ---GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAP 82 (203)
T ss_dssp STHHHHHHHHHH-CCCTTCEEEETTTCCSHHHHHHHHH---CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECS
T ss_pred CCHHHHHHHHhc-ccCCCCEEEEeCCCCcHhHHHHHHC---CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCC
Confidence 345555555433 2346789999999999999999986 5699999999999999998754210 124
Q ss_pred cEEEEEecchhhhHHHHhhhcCCCceeEEEEcCC-----ccchHHHHHHHHhcCCCCeEEE
Q 025824 132 KIDFREGPALPVLDLLIQDEKNHGSFDFIFVDAD-----KDNYLNYHKRLIELVKVGGVIG 187 (247)
Q Consensus 132 ~i~~~~gd~~~~l~~l~~~~~~~~~fD~v~id~~-----~~~~~~~l~~~~~~L~~gG~lv 187 (247)
+++++++|+.+....- .++||+|+.... ......+++.+.++|||||.++
T Consensus 83 ~v~~~~~d~~~l~~~~------~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~ 137 (203)
T 1pjz_A 83 GIEIWCGDFFALTARD------IGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGL 137 (203)
T ss_dssp SSEEEEECCSSSTHHH------HHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEE
T ss_pred ccEEEECccccCCccc------CCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEE
Confidence 7999999997753320 168999986443 2234568899999999999833
No 96
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.53 E-value=8e-14 Score=115.65 Aligned_cols=114 Identities=14% Similarity=0.141 Sum_probs=93.9
Q ss_pred HHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHc-CCCCcEEEEEecchhh
Q 025824 65 ADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKA-GVAHKIDFREGPALPV 143 (247)
Q Consensus 65 ~~~~~~l~~l~~~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~-g~~~~i~~~~gd~~~~ 143 (247)
+.....+...+...+..+|||+|||+|..+..+++.+.++++++++|+++++++.|+++++.. | .++++++.+|+.+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g-~~~v~~~~~d~~~~ 160 (258)
T 2pwy_A 82 PKDASAMVTLLDLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQ-VENVRFHLGKLEEA 160 (258)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC-CCCEEEEESCGGGC
T ss_pred chHHHHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcC-CCCEEEEECchhhc
Confidence 444445555555667789999999999999999998655789999999999999999999987 7 46899999998765
Q ss_pred -hHHHHhhhcCCCceeEEEEcCCccchHHHHHHHHhcCCCCeEEEEe
Q 025824 144 -LDLLIQDEKNHGSFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYD 189 (247)
Q Consensus 144 -l~~l~~~~~~~~~fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv~d 189 (247)
++ .++||+|+++.. .....++.+.+.|+|||.+++.
T Consensus 161 ~~~--------~~~~D~v~~~~~--~~~~~l~~~~~~L~~gG~l~~~ 197 (258)
T 2pwy_A 161 ELE--------EAAYDGVALDLM--EPWKVLEKAALALKPDRFLVAY 197 (258)
T ss_dssp CCC--------TTCEEEEEEESS--CGGGGHHHHHHHEEEEEEEEEE
T ss_pred CCC--------CCCcCEEEECCc--CHHHHHHHHHHhCCCCCEEEEE
Confidence 22 468999999764 3457789999999999999974
No 97
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.53 E-value=4.1e-14 Score=116.78 Aligned_cols=111 Identities=13% Similarity=0.150 Sum_probs=91.1
Q ss_pred HHHHHhhcC-CCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHh
Q 025824 71 LNMLLKLVN-AKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQ 149 (247)
Q Consensus 71 l~~l~~~~~-~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~ 149 (247)
|..+....+ ..+|||||||+|+.++.++...+ ..+|+++|+++.+++.|++|++.+|+.++|+++++|+.+.+..
T Consensus 12 L~~i~~~v~~g~~VlDIGtGsG~l~i~la~~~~-~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~--- 87 (244)
T 3gnl_A 12 LEKVASYITKNERIADIGSDHAYLPCFAVKNQT-ASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEK--- 87 (244)
T ss_dssp HHHHHTTCCSSEEEEEETCSTTHHHHHHHHTTS-EEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG---
T ss_pred HHHHHHhCCCCCEEEEECCccHHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCc---
Confidence 455555544 46899999999999999998754 6799999999999999999999999988999999999876542
Q ss_pred hhcCCCceeEEEEcCC-ccchHHHHHHHHhcCCCCeEEEEe
Q 025824 150 DEKNHGSFDFIFVDAD-KDNYLNYHKRLIELVKVGGVIGYD 189 (247)
Q Consensus 150 ~~~~~~~fD~v~id~~-~~~~~~~l~~~~~~L~~gG~lv~d 189 (247)
.++||+|++.+. ..-...+++.....|++++.+|+-
T Consensus 88 ----~~~~D~IviagmGg~lI~~IL~~~~~~L~~~~~lIlq 124 (244)
T 3gnl_A 88 ----KDAIDTIVIAGMGGTLIRTILEEGAAKLAGVTKLILQ 124 (244)
T ss_dssp ----GGCCCEEEEEEECHHHHHHHHHHTGGGGTTCCEEEEE
T ss_pred ----cccccEEEEeCCchHHHHHHHHHHHHHhCCCCEEEEE
Confidence 236999886433 445677888888999999999874
No 98
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.52 E-value=5.9e-14 Score=119.06 Aligned_cols=110 Identities=17% Similarity=0.243 Sum_probs=92.0
Q ss_pred hhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCC
Q 025824 76 KLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHG 155 (247)
Q Consensus 76 ~~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~ 155 (247)
...++.+|||||||+|..+..+++.. +.+++++|+++.+++.|++++...++.++++++++|+.+. + + .++
T Consensus 79 ~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-~-~-----~~~ 149 (297)
T 2o57_A 79 VLQRQAKGLDLGAGYGGAARFLVRKF--GVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEI-P-C-----EDN 149 (297)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSC-S-S-----CTT
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccC-C-C-----CCC
Confidence 33466899999999999999999875 4699999999999999999999999888999999999764 2 1 257
Q ss_pred ceeEEEEcCC---ccchHHHHHHHHhcCCCCeEEEEeccccc
Q 025824 156 SFDFIFVDAD---KDNYLNYHKRLIELVKVGGVIGYDNTLWN 194 (247)
Q Consensus 156 ~fD~v~id~~---~~~~~~~l~~~~~~L~~gG~lv~d~~~~~ 194 (247)
+||+|++... ..+...+++.+.+.|+|||.+++.+....
T Consensus 150 ~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 191 (297)
T 2o57_A 150 SYDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITDPMKE 191 (297)
T ss_dssp CEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEEC
T ss_pred CEeEEEecchhhhcCCHHHHHHHHHHHcCCCeEEEEEEeccC
Confidence 8999998654 23467899999999999999998776543
No 99
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.52 E-value=1.7e-13 Score=122.08 Aligned_cols=115 Identities=17% Similarity=0.178 Sum_probs=90.9
Q ss_pred HHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHH-------HHHHHHcCCC-CcEEEEEecchhh--
Q 025824 74 LLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELG-------LPVIQKAGVA-HKIDFREGPALPV-- 143 (247)
Q Consensus 74 l~~~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a-------~~~~~~~g~~-~~i~~~~gd~~~~-- 143 (247)
.+...+..+|||||||+|..++.++...+ ..+|+++|+++.+++.| ++++...|+. .+++++++|....
T Consensus 237 ~l~l~~g~~VLDLGCGsG~la~~LA~~~g-~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~~~~~ 315 (433)
T 1u2z_A 237 QCQLKKGDTFMDLGSGVGNCVVQAALECG-CALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFVDNN 315 (433)
T ss_dssp HTTCCTTCEEEEESCTTSHHHHHHHHHHC-CSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCSTTCH
T ss_pred hcCCCCCCEEEEeCCCcCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCcccccc
Confidence 33445678999999999999999998765 56899999999999998 8888888854 6899999876432
Q ss_pred -hHHHHhhhcCCCceeEEEEcCC--ccchHHHHHHHHhcCCCCeEEEEecccccc
Q 025824 144 -LDLLIQDEKNHGSFDFIFVDAD--KDNYLNYHKRLIELVKVGGVIGYDNTLWNG 195 (247)
Q Consensus 144 -l~~l~~~~~~~~~fD~v~id~~--~~~~~~~l~~~~~~L~~gG~lv~d~~~~~g 195 (247)
++.. .++||+|++... .......+..+.+.|+|||.|++.+.+.+.
T Consensus 316 ~~~~~------~~~FDvIvvn~~l~~~d~~~~L~el~r~LKpGG~lVi~d~f~p~ 364 (433)
T 1u2z_A 316 RVAEL------IPQCDVILVNNFLFDEDLNKKVEKILQTAKVGCKIISLKSLRSL 364 (433)
T ss_dssp HHHHH------GGGCSEEEECCTTCCHHHHHHHHHHHTTCCTTCEEEESSCSSCT
T ss_pred ccccc------cCCCCEEEEeCccccccHHHHHHHHHHhCCCCeEEEEeeccCCc
Confidence 2111 368999998633 355667788999999999999998766544
No 100
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.52 E-value=1.2e-13 Score=113.77 Aligned_cols=115 Identities=17% Similarity=0.232 Sum_probs=93.1
Q ss_pred HHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHH
Q 025824 67 EGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDL 146 (247)
Q Consensus 67 ~~~~l~~l~~~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~ 146 (247)
....+.......+..+|||+|||+|..+..++... .+++++|+++.+++.+++++...++. +++++++|+.+. +.
T Consensus 9 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~-~~ 83 (239)
T 1xxl_A 9 SLGLMIKTAECRAEHRVLDIGAGAGHTALAFSPYV---QECIGVDATKEMVEVASSFAQEKGVE-NVRFQQGTAESL-PF 83 (239)
T ss_dssp HHHHHHHHHTCCTTCEEEEESCTTSHHHHHHGGGS---SEEEEEESCHHHHHHHHHHHHHHTCC-SEEEEECBTTBC-CS
T ss_pred CcchHHHHhCcCCCCEEEEEccCcCHHHHHHHHhC---CEEEEEECCHHHHHHHHHHHHHcCCC-CeEEEecccccC-CC
Confidence 33344455566778899999999999999998764 49999999999999999999988874 799999998653 21
Q ss_pred HHhhhcCCCceeEEEEcCC---ccchHHHHHHHHhcCCCCeEEEEeccc
Q 025824 147 LIQDEKNHGSFDFIFVDAD---KDNYLNYHKRLIELVKVGGVIGYDNTL 192 (247)
Q Consensus 147 l~~~~~~~~~fD~v~id~~---~~~~~~~l~~~~~~L~~gG~lv~d~~~ 192 (247)
..++||+|++... ..+....+..+.+.|+|||.+++.+..
T Consensus 84 ------~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 126 (239)
T 1xxl_A 84 ------PDDSFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVDHY 126 (239)
T ss_dssp ------CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ------CCCcEEEEEECCchhhccCHHHHHHHHHHHcCCCcEEEEEEcC
Confidence 2578999998754 245678899999999999999986544
No 101
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.52 E-value=7.2e-13 Score=110.40 Aligned_cols=111 Identities=22% Similarity=0.266 Sum_probs=90.7
Q ss_pred HHHHHHHhh-cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHH
Q 025824 69 QFLNMLLKL-VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLL 147 (247)
Q Consensus 69 ~~l~~l~~~-~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l 147 (247)
..+..+... .++.+|||+|||+|..++.+++. +.+|+++|+++.+++.|++++...++. +++..+|+.+.++
T Consensus 109 ~~~~~l~~~~~~~~~VLDiGcG~G~l~~~la~~---g~~v~gvDi~~~~v~~a~~n~~~~~~~--v~~~~~d~~~~~~-- 181 (254)
T 2nxc_A 109 LALKALARHLRPGDKVLDLGTGSGVLAIAAEKL---GGKALGVDIDPMVLPQAEANAKRNGVR--PRFLEGSLEAALP-- 181 (254)
T ss_dssp HHHHHHHHHCCTTCEEEEETCTTSHHHHHHHHT---TCEEEEEESCGGGHHHHHHHHHHTTCC--CEEEESCHHHHGG--
T ss_pred HHHHHHHHhcCCCCEEEEecCCCcHHHHHHHHh---CCeEEEEECCHHHHHHHHHHHHHcCCc--EEEEECChhhcCc--
Confidence 344444333 45689999999999999998874 339999999999999999999998874 8999999876432
Q ss_pred HhhhcCCCceeEEEEcCCccchHHHHHHHHhcCCCCeEEEEeccc
Q 025824 148 IQDEKNHGSFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYDNTL 192 (247)
Q Consensus 148 ~~~~~~~~~fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv~d~~~ 192 (247)
.++||+|+++.........+..+.++|+|||.+++....
T Consensus 182 ------~~~fD~Vv~n~~~~~~~~~l~~~~~~LkpgG~lils~~~ 220 (254)
T 2nxc_A 182 ------FGPFDLLVANLYAELHAALAPRYREALVPGGRALLTGIL 220 (254)
T ss_dssp ------GCCEEEEEEECCHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred ------CCCCCEEEECCcHHHHHHHHHHHHHHcCCCCEEEEEeec
Confidence 468999999877666778899999999999999986543
No 102
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.51 E-value=8.6e-14 Score=115.83 Aligned_cols=107 Identities=15% Similarity=0.251 Sum_probs=88.0
Q ss_pred HHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcC
Q 025824 74 LLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKN 153 (247)
Q Consensus 74 l~~~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~ 153 (247)
.+...++.+|||+|||+|..+..+++.. .+|+++|+++.+++.|++++...++. +++++++|+.+. + + .
T Consensus 32 ~l~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~l~~a~~~~~~~~~~-~v~~~~~d~~~l-~-~-----~ 100 (260)
T 1vl5_A 32 IAALKGNEEVLDVATGGGHVANAFAPFV---KKVVAFDLTEDILKVARAFIEGNGHQ-QVEYVQGDAEQM-P-F-----T 100 (260)
T ss_dssp HHTCCSCCEEEEETCTTCHHHHHHGGGS---SEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCC-CC-C-S-----C
T ss_pred HhCCCCCCEEEEEeCCCCHHHHHHHHhC---CEEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEEecHHhC-C-C-----C
Confidence 3445577899999999999999998874 49999999999999999999988874 799999998763 2 1 2
Q ss_pred CCceeEEEEcCC---ccchHHHHHHHHhcCCCCeEEEEecc
Q 025824 154 HGSFDFIFVDAD---KDNYLNYHKRLIELVKVGGVIGYDNT 191 (247)
Q Consensus 154 ~~~fD~v~id~~---~~~~~~~l~~~~~~L~~gG~lv~d~~ 191 (247)
+++||+|++... ..+....+..+.+.|+|||.+++-+.
T Consensus 101 ~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~~~~~ 141 (260)
T 1vl5_A 101 DERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVDN 141 (260)
T ss_dssp TTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCEEEEEEhhhhHhcCCHHHHHHHHHHHcCCCCEEEEEEc
Confidence 579999998754 24557899999999999999998544
No 103
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.51 E-value=3.2e-14 Score=116.51 Aligned_cols=104 Identities=13% Similarity=0.161 Sum_probs=86.1
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCce
Q 025824 78 VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSF 157 (247)
Q Consensus 78 ~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~f 157 (247)
.++.+|||+|||+|..+..+++..| +.+++++|+++.+++.|++++...+ +++++++|+.+... .++|
T Consensus 43 ~~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~d~~~~~~--------~~~f 110 (234)
T 3dtn_A 43 TENPDILDLGAGTGLLSAFLMEKYP-EATFTLVDMSEKMLEIAKNRFRGNL---KVKYIEADYSKYDF--------EEKY 110 (234)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHTCSCT---TEEEEESCTTTCCC--------CSCE
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHhhccCC---CEEEEeCchhccCC--------CCCc
Confidence 4568999999999999999999886 7899999999999999999876544 79999999976532 3789
Q ss_pred eEEEEcCCcc-----chHHHHHHHHhcCCCCeEEEEecccc
Q 025824 158 DFIFVDADKD-----NYLNYHKRLIELVKVGGVIGYDNTLW 193 (247)
Q Consensus 158 D~v~id~~~~-----~~~~~l~~~~~~L~~gG~lv~d~~~~ 193 (247)
|+|++..... .....++.+.+.|+|||.+++.+...
T Consensus 111 D~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 151 (234)
T 3dtn_A 111 DMVVSALSIHHLEDEDKKELYKRSYSILKESGIFINADLVH 151 (234)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECB
T ss_pred eEEEEeCccccCCHHHHHHHHHHHHHhcCCCcEEEEEEecC
Confidence 9999876522 22358899999999999999876543
No 104
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.51 E-value=8.3e-14 Score=113.55 Aligned_cols=103 Identities=18% Similarity=0.232 Sum_probs=85.0
Q ss_pred hcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCC----CCcEEEEEecchhhhHHHHhhhc
Q 025824 77 LVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGV----AHKIDFREGPALPVLDLLIQDEK 152 (247)
Q Consensus 77 ~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~----~~~i~~~~gd~~~~l~~l~~~~~ 152 (247)
..+..+|||+|||+|+.+..+++..++.++|+++|+++.+++.+++++...+. .++++++++|+.+....
T Consensus 75 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~------ 148 (226)
T 1i1n_A 75 LHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAE------ 148 (226)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGG------
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCccc------
Confidence 44567999999999999999998865468999999999999999999988764 35799999998754321
Q ss_pred CCCceeEEEEcCCccchHHHHHHHHhcCCCCeEEEEe
Q 025824 153 NHGSFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYD 189 (247)
Q Consensus 153 ~~~~fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv~d 189 (247)
.++||+|+++...... ++.+.+.|+|||++++.
T Consensus 149 -~~~fD~i~~~~~~~~~---~~~~~~~LkpgG~lv~~ 181 (226)
T 1i1n_A 149 -EAPYDAIHVGAAAPVV---PQALIDQLKPGGRLILP 181 (226)
T ss_dssp -GCCEEEEEECSBBSSC---CHHHHHTEEEEEEEEEE
T ss_pred -CCCcCEEEECCchHHH---HHHHHHhcCCCcEEEEE
Confidence 4689999998875443 46788999999999984
No 105
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.51 E-value=8e-14 Score=117.28 Aligned_cols=118 Identities=14% Similarity=0.103 Sum_probs=95.1
Q ss_pred cCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHc-C-CCCcEEEEEecc
Q 025824 63 TSADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKA-G-VAHKIDFREGPA 140 (247)
Q Consensus 63 ~~~~~~~~l~~l~~~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~-g-~~~~i~~~~gd~ 140 (247)
+.+.....+...+...+..+|||+|||+|..+..+++.+.+.++++++|+++++++.|++++... | +.++++++++|+
T Consensus 83 ~~~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~ 162 (280)
T 1i9g_A 83 IYPKDAAQIVHEGDIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDL 162 (280)
T ss_dssp CCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCG
T ss_pred ecHHHHHHHHHHcCCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECch
Confidence 34555555555555667789999999999999999987655789999999999999999999887 5 456899999998
Q ss_pred hhhhHHHHhhhcCCCceeEEEEcCCccchHHHHHHHHhcCCCCeEEEEe
Q 025824 141 LPVLDLLIQDEKNHGSFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYD 189 (247)
Q Consensus 141 ~~~l~~l~~~~~~~~~fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv~d 189 (247)
.+... ..++||+|+++.. +...+++.+.+.|+|||.+++.
T Consensus 163 ~~~~~-------~~~~~D~v~~~~~--~~~~~l~~~~~~L~pgG~l~~~ 202 (280)
T 1i9g_A 163 ADSEL-------PDGSVDRAVLDML--APWEVLDAVSRLLVAGGVLMVY 202 (280)
T ss_dssp GGCCC-------CTTCEEEEEEESS--CGGGGHHHHHHHEEEEEEEEEE
T ss_pred HhcCC-------CCCceeEEEECCc--CHHHHHHHHHHhCCCCCEEEEE
Confidence 76521 1468999999765 3457889999999999999974
No 106
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.51 E-value=1.1e-13 Score=118.64 Aligned_cols=114 Identities=11% Similarity=0.133 Sum_probs=93.8
Q ss_pred HHHHHHHHhh---cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhh
Q 025824 68 GQFLNMLLKL---VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVL 144 (247)
Q Consensus 68 ~~~l~~l~~~---~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l 144 (247)
...+..++.. .+..+|||||||+|..+..+++.. +.+|+++|+++++++.|++++...++.++++++.+|+.+.
T Consensus 76 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~- 152 (318)
T 2fk8_A 76 YAKVDLNLDKLDLKPGMTLLDIGCGWGTTMRRAVERF--DVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDF- 152 (318)
T ss_dssp HHHHHHHHTTSCCCTTCEEEEESCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGC-
T ss_pred HHHHHHHHHhcCCCCcCEEEEEcccchHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHC-
Confidence 3444455443 356799999999999999999875 4699999999999999999999989888899999998653
Q ss_pred HHHHhhhcCCCceeEEEEcCC-----ccchHHHHHHHHhcCCCCeEEEEecccc
Q 025824 145 DLLIQDEKNHGSFDFIFVDAD-----KDNYLNYHKRLIELVKVGGVIGYDNTLW 193 (247)
Q Consensus 145 ~~l~~~~~~~~~fD~v~id~~-----~~~~~~~l~~~~~~L~~gG~lv~d~~~~ 193 (247)
.++||+|++... ..+...+++.+.+.|+|||.+++.+...
T Consensus 153 ---------~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 197 (318)
T 2fk8_A 153 ---------AEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSSVS 197 (318)
T ss_dssp ---------CCCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEEC
T ss_pred ---------CCCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEecc
Confidence 368999998743 2466889999999999999999876653
No 107
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.51 E-value=6.6e-15 Score=121.30 Aligned_cols=112 Identities=15% Similarity=0.141 Sum_probs=89.2
Q ss_pred HHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHH
Q 025824 68 GQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLL 147 (247)
Q Consensus 68 ~~~l~~l~~~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l 147 (247)
..++..+....++.+|||+|||+|..+..++.. +.+|+++|+++.+++.|++++...++.++++++++|+.+..+
T Consensus 67 ~~l~~~~~~~~~~~~vLD~gcG~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~-- 141 (241)
T 3gdh_A 67 EHIAGRVSQSFKCDVVVDAFCGVGGNTIQFALT---GMRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLAS-- 141 (241)
T ss_dssp HHHHHHHHHHSCCSEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHGG--
T ss_pred HHHHHHhhhccCCCEEEECccccCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhcc--
Confidence 334444445557889999999999999999985 479999999999999999999999987789999999987642
Q ss_pred HhhhcCCCceeEEEEcCCccch---HHHHHHHHhcCCCCeEEEEec
Q 025824 148 IQDEKNHGSFDFIFVDADKDNY---LNYHKRLIELVKVGGVIGYDN 190 (247)
Q Consensus 148 ~~~~~~~~~fD~v~id~~~~~~---~~~l~~~~~~L~~gG~lv~d~ 190 (247)
.++||+|+++.+.... ...+..+.+.|+|||+++++.
T Consensus 142 ------~~~~D~v~~~~~~~~~~~~~~~~~~~~~~L~pgG~~i~~~ 181 (241)
T 3gdh_A 142 ------FLKADVVFLSPPWGGPDYATAETFDIRTMMSPDGFEIFRL 181 (241)
T ss_dssp ------GCCCSEEEECCCCSSGGGGGSSSBCTTTSCSSCHHHHHHH
T ss_pred ------cCCCCEEEECCCcCCcchhhhHHHHHHhhcCCcceeHHHH
Confidence 4799999998763222 224445678999999987653
No 108
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.51 E-value=1.1e-13 Score=115.43 Aligned_cols=124 Identities=11% Similarity=0.010 Sum_probs=89.5
Q ss_pred CCCccccCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHH----------
Q 025824 57 PWNIMTTSADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQK---------- 126 (247)
Q Consensus 57 ~~~~~~~~~~~~~~l~~l~~~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~---------- 126 (247)
+|......+...+++..+....++.+|||+|||+|..+.+|++. +.+|++||+++.+++.|++....
T Consensus 46 ~~~~~~~~~~l~~~~~~~~~~~~~~~vLD~GCG~G~~~~~La~~---G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~ 122 (252)
T 2gb4_A 46 SFHQEQGHQLLKKHLDTFLKGQSGLRVFFPLCGKAIEMKWFADR---GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEI 122 (252)
T ss_dssp TTCCTTCCHHHHHHHHHHHTTCCSCEEEETTCTTCTHHHHHHHT---TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTS
T ss_pred CcccCCCCHHHHHHHHHhccCCCCCeEEEeCCCCcHHHHHHHHC---CCeEEEEECCHHHHHHHHHhccccccccccccc
Confidence 34333444555555554443346789999999999999999975 56999999999999999765431
Q ss_pred c------CCCCcEEEEEecchhhhHHHHhhhcCCCceeEEEEcCC-----ccchHHHHHHHHhcCCCCeEEEEe
Q 025824 127 A------GVAHKIDFREGPALPVLDLLIQDEKNHGSFDFIFVDAD-----KDNYLNYHKRLIELVKVGGVIGYD 189 (247)
Q Consensus 127 ~------g~~~~i~~~~gd~~~~l~~l~~~~~~~~~fD~v~id~~-----~~~~~~~l~~~~~~L~~gG~lv~d 189 (247)
. ....+++++++|+.+.... ..++||+|+.... ......+++.+.++|+|||++++-
T Consensus 123 ~~~~~~~~~~~~i~~~~~D~~~l~~~------~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~ 190 (252)
T 2gb4_A 123 AGAKVFKSSSGSISLYCCSIFDLPRA------NIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVA 190 (252)
T ss_dssp TTCEEEEETTSSEEEEESCTTTGGGG------CCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEE
T ss_pred ccccccccCCCceEEEECccccCCcc------cCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 0 0125799999999765331 1278999985432 234567899999999999998643
No 109
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.51 E-value=8.4e-14 Score=115.34 Aligned_cols=104 Identities=20% Similarity=0.249 Sum_probs=86.1
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHc--------CCCCcEEEEEecchhhhHHHHhh
Q 025824 79 NAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKA--------GVAHKIDFREGPALPVLDLLIQD 150 (247)
Q Consensus 79 ~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~--------g~~~~i~~~~gd~~~~l~~l~~~ 150 (247)
+..+|||||||+|..++.++...+ +.+++++|+++.+++.|++++... ++ .+++++.+|+.+.++...
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~-~nv~~~~~D~~~~l~~~~-- 124 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAFP-EDLILGMEIRVQVTNYVEDRIIALRNNTASKHGF-QNINVLRGNAMKFLPNFF-- 124 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHST-TSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTT-TTEEEEECCTTSCGGGTS--
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCC-CCCEEEEEcCHHHHHHHHHHHHHHhhccccccCC-CcEEEEeccHHHHHHHhc--
Confidence 567899999999999999999876 789999999999999999998876 66 479999999987665422
Q ss_pred hcCCCceeEEEEcCCccc-----------hHHHHHHHHhcCCCCeEEEE
Q 025824 151 EKNHGSFDFIFVDADKDN-----------YLNYHKRLIELVKVGGVIGY 188 (247)
Q Consensus 151 ~~~~~~fD~v~id~~~~~-----------~~~~l~~~~~~L~~gG~lv~ 188 (247)
..+.+|.|++..+... +..++..+.++|+|||+|++
T Consensus 125 --~~~~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~ 171 (246)
T 2vdv_E 125 --EKGQLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYT 171 (246)
T ss_dssp --CTTCEEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEE
T ss_pred --cccccCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEE
Confidence 2578999987643221 25789999999999999987
No 110
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.51 E-value=8.7e-13 Score=124.15 Aligned_cols=160 Identities=11% Similarity=0.107 Sum_probs=111.3
Q ss_pred HHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHc------CCCCcEEEEEecchhhh
Q 025824 71 LNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKA------GVAHKIDFREGPALPVL 144 (247)
Q Consensus 71 l~~l~~~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~------g~~~~i~~~~gd~~~~l 144 (247)
+...+...++.+|||||||+|..+..|++..++..+|+++|+++.+++.|++++... ++ .+++++++|+.+..
T Consensus 713 LLelL~~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl-~nVefiqGDa~dLp 791 (950)
T 3htx_A 713 ALKHIRESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNV-KSATLYDGSILEFD 791 (950)
T ss_dssp HHHHHHHSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSC-SEEEEEESCTTSCC
T ss_pred HHHHhcccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCC-CceEEEECchHhCC
Confidence 333444557889999999999999999987644689999999999999999977643 33 47999999997643
Q ss_pred HHHHhhhcCCCceeEEEEcCCccc-----hHHHHHHHHhcCCCCeEEEEec------cccccc-----ccCCCC---Ccc
Q 025824 145 DLLIQDEKNHGSFDFIFVDADKDN-----YLNYHKRLIELVKVGGVIGYDN------TLWNGS-----VVAPPD---APL 205 (247)
Q Consensus 145 ~~l~~~~~~~~~fD~v~id~~~~~-----~~~~l~~~~~~L~~gG~lv~d~------~~~~g~-----~~~~~~---~~~ 205 (247)
. ..++||+|++.....+ ...+++.+.+.|+|| ++++.. .++.+. ...+.. ...
T Consensus 792 ~-------~d~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN~eyN~lF~~Lnp~tr~~dPd~~~~~~f 863 (950)
T 3htx_A 792 S-------RLHDVDIGTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPNYEFNTILQRSTPETQEENNSEPQLPKF 863 (950)
T ss_dssp T-------TSCSCCEEEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECBGGGHHHHTCC------------CCSSC
T ss_pred c-------ccCCeeEEEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEecCchhhhhhhhcccccccccccccccccc
Confidence 2 2578999998765332 234788999999999 555532 222221 000000 000
Q ss_pred ---hhhhchHHHHHHHHHHHHHcCCCeeEEeeecCCe
Q 025824 206 ---RKYVRYYRDFVLELNKALAADPRIEICMLPVGDG 239 (247)
Q Consensus 206 ---~~~~~~~~~~~~~~~~~i~~~~~~~~~~lp~~dG 239 (247)
..........++.+.+.+.++.++...+.++|+|
T Consensus 864 Rh~DHrFEWTReEFr~Wae~LAer~GYsVefvGVGDg 900 (950)
T 3htx_A 864 RNHDHKFEWTREQFNQWASKLGKRHNYSVEFSGVGGS 900 (950)
T ss_dssp SCSSCSCCBCHHHHHHHHHHHHHHTTEEEEEEEESSC
T ss_pred cccCcceeecHHHHHHHHHHHHHhcCcEEEEEccCCC
Confidence 0112233456677777788888999999999988
No 111
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.51 E-value=5.2e-14 Score=123.77 Aligned_cols=102 Identities=12% Similarity=0.091 Sum_probs=86.6
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCC--cEEEEEecchhhhHHHHhhhcCCC
Q 025824 78 VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAH--KIDFREGPALPVLDLLIQDEKNHG 155 (247)
Q Consensus 78 ~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~--~i~~~~gd~~~~l~~l~~~~~~~~ 155 (247)
.+..+|||+|||+|..++.+++..| +.+|+++|+++.+++.|++++...++.+ +++++.+|+.+.++ .+
T Consensus 221 ~~~~~VLDlGcG~G~~s~~la~~~p-~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~~~--------~~ 291 (375)
T 4dcm_A 221 NLEGEIVDLGCGNGVIGLTLLDKNP-QAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVE--------PF 291 (375)
T ss_dssp SCCSEEEEETCTTCHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTTCC--------TT
T ss_pred cCCCeEEEEeCcchHHHHHHHHHCC-CCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhccCC--------CC
Confidence 3457999999999999999999876 7899999999999999999999988754 58889999987443 46
Q ss_pred ceeEEEEcCCc--------cchHHHHHHHHhcCCCCeEEEE
Q 025824 156 SFDFIFVDADK--------DNYLNYHKRLIELVKVGGVIGY 188 (247)
Q Consensus 156 ~fD~v~id~~~--------~~~~~~l~~~~~~L~~gG~lv~ 188 (247)
+||+|+++.+. .....+++.+.+.|+|||.+++
T Consensus 292 ~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~i 332 (375)
T 4dcm_A 292 RFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYI 332 (375)
T ss_dssp CEEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEE
T ss_pred CeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEE
Confidence 89999998652 2234678999999999999997
No 112
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.51 E-value=1.5e-13 Score=116.04 Aligned_cols=115 Identities=8% Similarity=0.068 Sum_probs=93.5
Q ss_pred HHHHHHHHHhh---cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhh
Q 025824 67 EGQFLNMLLKL---VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPV 143 (247)
Q Consensus 67 ~~~~l~~l~~~---~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~ 143 (247)
....+..++.. .+..+|||||||+|..+..+++..+ .+|+++|+++++++.+++.+...++.++++++.+|+.+.
T Consensus 49 ~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~--~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 126 (287)
T 1kpg_A 49 QIAKIDLALGKLGLQPGMTLLDVGCGWGATMMRAVEKYD--VNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQF 126 (287)
T ss_dssp HHHHHHHHHTTTTCCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGC
T ss_pred HHHHHHHHHHHcCCCCcCEEEEECCcccHHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhC
Confidence 33444444443 3567999999999999999996653 599999999999999999999988878899999998543
Q ss_pred hHHHHhhhcCCCceeEEEEcCC-----ccchHHHHHHHHhcCCCCeEEEEecccc
Q 025824 144 LDLLIQDEKNHGSFDFIFVDAD-----KDNYLNYHKRLIELVKVGGVIGYDNTLW 193 (247)
Q Consensus 144 l~~l~~~~~~~~~fD~v~id~~-----~~~~~~~l~~~~~~L~~gG~lv~d~~~~ 193 (247)
.++||+|++... ..+...+++.+.++|+|||.+++.+...
T Consensus 127 ----------~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 171 (287)
T 1kpg_A 127 ----------DEPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTITG 171 (287)
T ss_dssp ----------CCCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEEEE
T ss_pred ----------CCCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEecC
Confidence 368999997644 2456789999999999999999977654
No 113
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.50 E-value=1.4e-13 Score=113.50 Aligned_cols=114 Identities=18% Similarity=0.284 Sum_probs=94.1
Q ss_pred CHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhh
Q 025824 64 SADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPV 143 (247)
Q Consensus 64 ~~~~~~~l~~l~~~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~ 143 (247)
.+.....+...+...+..+|||+|||+|..+..+++. ..+++++|+++++++.|++++...++.++++++.+|+.+.
T Consensus 76 ~~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 152 (248)
T 2yvl_A 76 YPKDSFYIALKLNLNKEKRVLEFGTGSGALLAVLSEV---AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDA 152 (248)
T ss_dssp CHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH---SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTS
T ss_pred cchhHHHHHHhcCCCCCCEEEEeCCCccHHHHHHHHh---CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhc
Confidence 3555555555556567789999999999999999987 5799999999999999999999988877899999998765
Q ss_pred hHHHHhhhcCCCceeEEEEcCCccchHHHHHHHHhcCCCCeEEEEe
Q 025824 144 LDLLIQDEKNHGSFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYD 189 (247)
Q Consensus 144 l~~l~~~~~~~~~fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv~d 189 (247)
.. ..++||+||++.. .....++.+.+.|+|||.+++.
T Consensus 153 ~~-------~~~~~D~v~~~~~--~~~~~l~~~~~~L~~gG~l~~~ 189 (248)
T 2yvl_A 153 EV-------PEGIFHAAFVDVR--EPWHYLEKVHKSLMEGAPVGFL 189 (248)
T ss_dssp CC-------CTTCBSEEEECSS--CGGGGHHHHHHHBCTTCEEEEE
T ss_pred cc-------CCCcccEEEECCc--CHHHHHHHHHHHcCCCCEEEEE
Confidence 41 1468999999764 3457788999999999999974
No 114
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.50 E-value=2.2e-13 Score=120.68 Aligned_cols=110 Identities=18% Similarity=0.292 Sum_probs=93.2
Q ss_pred hhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCC-CCcEEEEEecchhhhHHHHhhhcCC
Q 025824 76 KLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGV-AHKIDFREGPALPVLDLLIQDEKNH 154 (247)
Q Consensus 76 ~~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~-~~~i~~~~gd~~~~l~~l~~~~~~~ 154 (247)
...+.++|||+|||+|..++.++..- ..+|+++|+++.+++.|++|++.+++ .++++++++|+.+.++.+..+ .
T Consensus 217 ~~~~~~~VLDl~cG~G~~sl~la~~g--~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~---~ 291 (396)
T 3c0k_A 217 RYVENKRVLNCFSYTGGFAVSALMGG--CSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDR---G 291 (396)
T ss_dssp HHCTTCEEEEESCTTCSHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHT---T
T ss_pred HhhCCCeEEEeeccCCHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhc---C
Confidence 33677899999999999999999852 46999999999999999999999998 668999999998887655322 3
Q ss_pred CceeEEEEcCCc------------cchHHHHHHHHhcCCCCeEEEEec
Q 025824 155 GSFDFIFVDADK------------DNYLNYHKRLIELVKVGGVIGYDN 190 (247)
Q Consensus 155 ~~fD~v~id~~~------------~~~~~~l~~~~~~L~~gG~lv~d~ 190 (247)
.+||+|++|.+. ..+..++..+.+.|+|||++++..
T Consensus 292 ~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 339 (396)
T 3c0k_A 292 EKFDVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFS 339 (396)
T ss_dssp CCEEEEEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCCCEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 689999999864 566788899999999999999754
No 115
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.50 E-value=2.3e-13 Score=120.07 Aligned_cols=108 Identities=15% Similarity=0.208 Sum_probs=89.1
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCC-cEEEEEecchhhhHHHHhhhcCCCc
Q 025824 78 VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAH-KIDFREGPALPVLDLLIQDEKNHGS 156 (247)
Q Consensus 78 ~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~-~i~~~~gd~~~~l~~l~~~~~~~~~ 156 (247)
.+.++|||+|||+|..++.++..- ..+|+++|+++.+++.|++|++.+++.+ +++++++|+.+.++.+..+ ..+
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~g--a~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~---~~~ 285 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGG--AMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRH---HLT 285 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTT--BSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHT---TCC
T ss_pred cCCCeEEEEeeccCHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHh---CCC
Confidence 567899999999999999999741 3599999999999999999999999865 8999999999887765322 358
Q ss_pred eeEEEEcCCcc------------chHHHHHHHHhcCCCCeEEEEec
Q 025824 157 FDFIFVDADKD------------NYLNYHKRLIELVKVGGVIGYDN 190 (247)
Q Consensus 157 fD~v~id~~~~------------~~~~~l~~~~~~L~~gG~lv~d~ 190 (247)
||+|++|.+.. .+..++..+.++|+|||++++..
T Consensus 286 fD~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~ 331 (385)
T 2b78_A 286 YDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIAST 331 (385)
T ss_dssp EEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ccEEEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 99999997631 23446677789999999999754
No 116
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.50 E-value=1e-13 Score=114.01 Aligned_cols=113 Identities=19% Similarity=0.259 Sum_probs=90.1
Q ss_pred CHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhh
Q 025824 64 SADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPV 143 (247)
Q Consensus 64 ~~~~~~~l~~l~~~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~ 143 (247)
.+.....+...+...+..+|||+|||+|+.+..+++..+ .+|+++|+++.+++.|++++...++. +++++.+|+...
T Consensus 76 ~~~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~ 152 (235)
T 1jg1_A 76 APHMVAIMLEIANLKPGMNILEVGTGSGWNAALISEIVK--TDVYTIERIPELVEFAKRNLERAGVK-NVHVILGDGSKG 152 (235)
T ss_dssp CHHHHHHHHHHHTCCTTCCEEEECCTTSHHHHHHHHHHC--SCEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCGGGC
T ss_pred cHHHHHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHHcCCC-CcEEEECCcccC
Confidence 455555555555666778999999999999999998865 79999999999999999999998875 499999998443
Q ss_pred hHHHHhhhcCCCceeEEEEcCCccchHHHHHHHHhcCCCCeEEEEe
Q 025824 144 LDLLIQDEKNHGSFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYD 189 (247)
Q Consensus 144 l~~l~~~~~~~~~fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv~d 189 (247)
++. ..+||+|+++....... +.+.+.|+|||.+++.
T Consensus 153 ~~~-------~~~fD~Ii~~~~~~~~~---~~~~~~L~pgG~lvi~ 188 (235)
T 1jg1_A 153 FPP-------KAPYDVIIVTAGAPKIP---EPLIEQLKIGGKLIIP 188 (235)
T ss_dssp CGG-------GCCEEEEEECSBBSSCC---HHHHHTEEEEEEEEEE
T ss_pred CCC-------CCCccEEEECCcHHHHH---HHHHHhcCCCcEEEEE
Confidence 332 34699999987654443 4678899999999874
No 117
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.50 E-value=7.1e-14 Score=119.72 Aligned_cols=108 Identities=12% Similarity=0.192 Sum_probs=90.5
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCce
Q 025824 78 VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSF 157 (247)
Q Consensus 78 ~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~f 157 (247)
.+..+|||+|||+|..+..+++.. +++|+++|+++.+++.|++++...++.++++++++|+.+. + + ..++|
T Consensus 116 ~~~~~vLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~-~-----~~~~f 186 (312)
T 3vc1_A 116 GPDDTLVDAGCGRGGSMVMAHRRF--GSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDT-P-F-----DKGAV 186 (312)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSC-C-C-----CTTCE
T ss_pred CCCCEEEEecCCCCHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcC-C-C-----CCCCE
Confidence 346799999999999999999875 4799999999999999999999999988999999999764 2 1 25799
Q ss_pred eEEEEcCC--ccchHHHHHHHHhcCCCCeEEEEeccccc
Q 025824 158 DFIFVDAD--KDNYLNYHKRLIELVKVGGVIGYDNTLWN 194 (247)
Q Consensus 158 D~v~id~~--~~~~~~~l~~~~~~L~~gG~lv~d~~~~~ 194 (247)
|+|++... .-....+++.+.+.|+|||.+++-+....
T Consensus 187 D~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 225 (312)
T 3vc1_A 187 TASWNNESTMYVDLHDLFSEHSRFLKVGGRYVTITGCWN 225 (312)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHEEEEEEEEEEEEEEC
T ss_pred eEEEECCchhhCCHHHHHHHHHHHcCCCcEEEEEEcccc
Confidence 99998644 22478899999999999999998665443
No 118
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.50 E-value=7.3e-14 Score=114.05 Aligned_cols=103 Identities=17% Similarity=0.161 Sum_probs=84.2
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhh--HHHHhhhcCCC
Q 025824 78 VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVL--DLLIQDEKNHG 155 (247)
Q Consensus 78 ~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l--~~l~~~~~~~~ 155 (247)
.+..+|||+|||+|..+..+++.+++.++|+++|+++.+++.++++++.. .+++++++|+.+.. ..+ .+
T Consensus 72 ~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~---~~v~~~~~d~~~~~~~~~~------~~ 142 (227)
T 1g8a_A 72 KPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER---RNIVPILGDATKPEEYRAL------VP 142 (227)
T ss_dssp CTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC---TTEEEEECCTTCGGGGTTT------CC
T ss_pred CCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc---CCCEEEEccCCCcchhhcc------cC
Confidence 35679999999999999999988755689999999999999999888654 57999999997632 111 35
Q ss_pred ceeEEEEcCCccchH-HHHHHHHhcCCCCeEEEEe
Q 025824 156 SFDFIFVDADKDNYL-NYHKRLIELVKVGGVIGYD 189 (247)
Q Consensus 156 ~fD~v~id~~~~~~~-~~l~~~~~~L~~gG~lv~d 189 (247)
+||+|++|....... .++..+.+.|+|||.+++.
T Consensus 143 ~~D~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 143 KVDVIFEDVAQPTQAKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp CEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CceEEEECCCCHhHHHHHHHHHHHhcCCCCEEEEE
Confidence 899999998744443 3489999999999999986
No 119
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.50 E-value=3.3e-14 Score=119.80 Aligned_cols=112 Identities=14% Similarity=0.243 Sum_probs=88.7
Q ss_pred HHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHc-CCCCcEEEEEecchhhhHH
Q 025824 68 GQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKA-GVAHKIDFREGPALPVLDL 146 (247)
Q Consensus 68 ~~~l~~l~~~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~-g~~~~i~~~~gd~~~~l~~ 146 (247)
...+...+...+..+|||+|||+|..+..+++.+.++++|+++|+++++++.|++++... |. ++++++.+|+.+.++
T Consensus 99 ~~~~~~~~~~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~-~~v~~~~~d~~~~~~- 176 (275)
T 1yb2_A 99 ASYIIMRCGLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDI-GNVRTSRSDIADFIS- 176 (275)
T ss_dssp -------CCCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCC-TTEEEECSCTTTCCC-
T ss_pred HHHHHHHcCCCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCC-CcEEEEECchhccCc-
Confidence 334444445566789999999999999999988544789999999999999999999987 74 579999999976432
Q ss_pred HHhhhcCCCceeEEEEcCCccchHHHHHHHHhcCCCCeEEEEec
Q 025824 147 LIQDEKNHGSFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYDN 190 (247)
Q Consensus 147 l~~~~~~~~~fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv~d~ 190 (247)
.++||+|+++.+ +...+++.+.+.|+|||.+++..
T Consensus 177 -------~~~fD~Vi~~~~--~~~~~l~~~~~~LkpgG~l~i~~ 211 (275)
T 1yb2_A 177 -------DQMYDAVIADIP--DPWNHVQKIASMMKPGSVATFYL 211 (275)
T ss_dssp -------SCCEEEEEECCS--CGGGSHHHHHHTEEEEEEEEEEE
T ss_pred -------CCCccEEEEcCc--CHHHHHHHHHHHcCCCCEEEEEe
Confidence 468999999764 34678899999999999999753
No 120
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.50 E-value=7e-14 Score=114.81 Aligned_cols=106 Identities=12% Similarity=0.093 Sum_probs=85.9
Q ss_pred hcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCc
Q 025824 77 LVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGS 156 (247)
Q Consensus 77 ~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~ 156 (247)
..+..+|||+|||+|+.+..+++...+.++|+++|+++++++.++++.+.. .++..+.+|+.+..... ...+.
T Consensus 75 ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~---~ni~~V~~d~~~p~~~~----~~~~~ 147 (233)
T 4df3_A 75 VKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDR---RNIFPILGDARFPEKYR----HLVEG 147 (233)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTC---TTEEEEESCTTCGGGGT----TTCCC
T ss_pred CCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhh---cCeeEEEEeccCccccc----cccce
Confidence 356789999999999999999999877999999999999999998877654 46889999886532111 02578
Q ss_pred eeEEEEcCC-ccchHHHHHHHHhcCCCCeEEEEe
Q 025824 157 FDFIFVDAD-KDNYLNYHKRLIELVKVGGVIGYD 189 (247)
Q Consensus 157 fD~v~id~~-~~~~~~~l~~~~~~L~~gG~lv~d 189 (247)
+|+||.|.. +......+..+.+.|||||.+++.
T Consensus 148 vDvVf~d~~~~~~~~~~l~~~~r~LKpGG~lvI~ 181 (233)
T 4df3_A 148 VDGLYADVAQPEQAAIVVRNARFFLRDGGYMLMA 181 (233)
T ss_dssp EEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEEEeccCChhHHHHHHHHHHhccCCCEEEEE
Confidence 999999876 344567888999999999999874
No 121
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.50 E-value=3.2e-13 Score=107.41 Aligned_cols=105 Identities=16% Similarity=0.096 Sum_probs=86.8
Q ss_pred HHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcC
Q 025824 74 LLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKN 153 (247)
Q Consensus 74 l~~~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~ 153 (247)
.+...++.+|||+|||+|..+..+++. +.+++++|+++.+++.+++++...++ .+++++.+|+.+...
T Consensus 27 ~~~~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~~d~~~~~~-------- 94 (199)
T 2xvm_A 27 AVKVVKPGKTLDLGCGNGRNSLYLAAN---GYDVDAWDKNAMSIANVERIKSIENL-DNLHTRVVDLNNLTF-------- 94 (199)
T ss_dssp HTTTSCSCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHTC-TTEEEEECCGGGCCC--------
T ss_pred HhhccCCCeEEEEcCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHhCCC-CCcEEEEcchhhCCC--------
Confidence 334457789999999999999999986 56999999999999999999998877 459999999876421
Q ss_pred CCceeEEEEcCC-----ccchHHHHHHHHhcCCCCeEEEEec
Q 025824 154 HGSFDFIFVDAD-----KDNYLNYHKRLIELVKVGGVIGYDN 190 (247)
Q Consensus 154 ~~~fD~v~id~~-----~~~~~~~l~~~~~~L~~gG~lv~d~ 190 (247)
.++||+|++... ......+++.+.+.|+|||.+++-.
T Consensus 95 ~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 136 (199)
T 2xvm_A 95 DRQYDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVA 136 (199)
T ss_dssp CCCEEEEEEESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCCceEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEE
Confidence 468999998754 2356789999999999999977643
No 122
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.49 E-value=8.8e-14 Score=114.08 Aligned_cols=102 Identities=17% Similarity=0.126 Sum_probs=85.5
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCcee
Q 025824 79 NAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFD 158 (247)
Q Consensus 79 ~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~fD 158 (247)
++.+|||+|||+|..+..++. ++.+|+++|+++.+++.|++++...+...+++++++|+.+..+ .++||
T Consensus 66 ~~~~vLDiGcG~G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~--------~~~fD 134 (235)
T 3lcc_A 66 PLGRALVPGCGGGHDVVAMAS---PERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRP--------TELFD 134 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHCB---TTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCC--------SSCEE
T ss_pred CCCCEEEeCCCCCHHHHHHHh---CCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCCC--------CCCee
Confidence 456999999999999998875 3679999999999999999999876666789999999987532 46899
Q ss_pred EEEEcCC-----ccchHHHHHHHHhcCCCCeEEEEecc
Q 025824 159 FIFVDAD-----KDNYLNYHKRLIELVKVGGVIGYDNT 191 (247)
Q Consensus 159 ~v~id~~-----~~~~~~~l~~~~~~L~~gG~lv~d~~ 191 (247)
+|++... ......+++.+.+.|+|||.+++...
T Consensus 135 ~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 172 (235)
T 3lcc_A 135 LIFDYVFFCAIEPEMRPAWAKSMYELLKPDGELITLMY 172 (235)
T ss_dssp EEEEESSTTTSCGGGHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EEEEChhhhcCCHHHHHHHHHHHHHHCCCCcEEEEEEe
Confidence 9997543 33667899999999999999998544
No 123
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.49 E-value=1.3e-13 Score=111.68 Aligned_cols=104 Identities=15% Similarity=0.097 Sum_probs=79.6
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCce
Q 025824 78 VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSF 157 (247)
Q Consensus 78 ~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~f 157 (247)
.+..+|||+|||+|..+..+++..+ +++|+++|+++.+++.+.+..+.. .++.++.+|+.+...... ..++|
T Consensus 56 ~~g~~VLDlGcGtG~~~~~la~~~~-~~~V~gvD~s~~~l~~~~~~a~~~---~~v~~~~~d~~~~~~~~~----~~~~f 127 (210)
T 1nt2_A 56 RGDERVLYLGAASGTTVSHLADIVD-EGIIYAVEYSAKPFEKLLELVRER---NNIIPLLFDASKPWKYSG----IVEKV 127 (210)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHTT-TSEEEEECCCHHHHHHHHHHHHHC---SSEEEECSCTTCGGGTTT----TCCCE
T ss_pred CCCCEEEEECCcCCHHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHhcC---CCeEEEEcCCCCchhhcc----cccce
Confidence 3567999999999999999999887 789999999999887666655543 368888898865311000 13689
Q ss_pred eEEEEcCCccc-hHHHHHHHHhcCCCCeEEEEe
Q 025824 158 DFIFVDADKDN-YLNYHKRLIELVKVGGVIGYD 189 (247)
Q Consensus 158 D~v~id~~~~~-~~~~l~~~~~~L~~gG~lv~d 189 (247)
|+|+++..... ...+++.+.+.|||||.+++.
T Consensus 128 D~V~~~~~~~~~~~~~l~~~~r~LkpgG~l~i~ 160 (210)
T 1nt2_A 128 DLIYQDIAQKNQIEILKANAEFFLKEKGEVVIM 160 (210)
T ss_dssp EEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred eEEEEeccChhHHHHHHHHHHHHhCCCCEEEEE
Confidence 99999865333 233488999999999999986
No 124
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.49 E-value=9e-13 Score=104.29 Aligned_cols=159 Identities=13% Similarity=0.028 Sum_probs=104.7
Q ss_pred HHHHHHHHHHHhh-cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhh
Q 025824 65 ADEGQFLNMLLKL-VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPV 143 (247)
Q Consensus 65 ~~~~~~l~~l~~~-~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~ 143 (247)
|....+....... .++.+|||+|||+|..++.++...| +.+++++|+|+.+++.+++++...|...++++ .|..+.
T Consensus 34 p~ld~fY~~~~~~l~~~~~VLDlGCG~GplAl~l~~~~p-~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~ 110 (200)
T 3fzg_A 34 ATLNDFYTYVFGNIKHVSSILDFGCGFNPLALYQWNENE-KIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESD 110 (200)
T ss_dssp GGHHHHHHHHHHHSCCCSEEEEETCTTHHHHHHHHCSSC-CCEEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHH
T ss_pred HhHHHHHHHHHhhcCCCCeEEEecCCCCHHHHHHHhcCC-CCEEEEEeCCHHHHHHHHHHHHhcCCCccEEE--eccccc
Confidence 4555555554443 5688999999999999999988776 67999999999999999999999998766777 555443
Q ss_pred hHHHHhhhcCCCceeEEEEcCCcc---chHHHHHHHHhcCCCCeEEEEeccc-ccccccCCCCCcchhhhchHHHHHHHH
Q 025824 144 LDLLIQDEKNHGSFDFIFVDADKD---NYLNYHKRLIELVKVGGVIGYDNTL-WNGSVVAPPDAPLRKYVRYYRDFVLEL 219 (247)
Q Consensus 144 l~~l~~~~~~~~~fD~v~id~~~~---~~~~~l~~~~~~L~~gG~lv~d~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~ 219 (247)
. ..++||+|+.-..-. +....+..+...|+|||++|.-++- ..|.-..-. +.+. +.|
T Consensus 111 ~--------~~~~~DvVLa~k~LHlL~~~~~al~~v~~~L~pggvfISfptksl~Gr~~gm~--------~~Y~---~~~ 171 (200)
T 3fzg_A 111 V--------YKGTYDVVFLLKMLPVLKQQDVNILDFLQLFHTQNFVISFPIKSLSGKEKGME--------ENYQ---LWF 171 (200)
T ss_dssp H--------TTSEEEEEEEETCHHHHHHTTCCHHHHHHTCEEEEEEEEEECCCCC--CTTCC--------CCHH---HHH
T ss_pred C--------CCCCcChhhHhhHHHhhhhhHHHHHHHHHHhCCCCEEEEeChHHhcCCCcchh--------hhHH---HHH
Confidence 2 257899998754411 1122344688999999999975522 122111111 1122 344
Q ss_pred HHHHHcCCCeeEEeeecCCeeEEEEEc
Q 025824 220 NKALAADPRIEICMLPVGDGVTICRRI 246 (247)
Q Consensus 220 ~~~i~~~~~~~~~~lp~~dG~~i~~k~ 246 (247)
.+.+ ........-+-+++=+..+.++
T Consensus 172 ~~~~-~~~~~~~~~~~~~nEl~y~~~~ 197 (200)
T 3fzg_A 172 ESFT-KGWIKILDSKVIGNELVYITSG 197 (200)
T ss_dssp HHHT-TTTSCEEEEEEETTEEEEEECC
T ss_pred HHhc-cCcceeeeeeeeCceEEEEEec
Confidence 4455 3444444455667666665554
No 125
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.49 E-value=4.4e-13 Score=113.13 Aligned_cols=102 Identities=17% Similarity=0.156 Sum_probs=86.3
Q ss_pred hhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCC
Q 025824 76 KLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHG 155 (247)
Q Consensus 76 ~~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~ 155 (247)
...++.+|||+|||+|..+..+++. +.+|+++|+++.+++.+++++...++ +++++++|+.+... .+
T Consensus 117 ~~~~~~~vLD~GcG~G~~~~~l~~~---g~~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~--------~~ 183 (286)
T 3m70_A 117 KIISPCKVLDLGCGQGRNSLYLSLL---GYDVTSWDHNENSIAFLNETKEKENL--NISTALYDINAANI--------QE 183 (286)
T ss_dssp HHSCSCEEEEESCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCGGGCCC--------CS
T ss_pred hccCCCcEEEECCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHHcCC--ceEEEEeccccccc--------cC
Confidence 3447889999999999999999986 56999999999999999999999887 79999999876432 47
Q ss_pred ceeEEEEcCC-----ccchHHHHHHHHhcCCCCeEEEEec
Q 025824 156 SFDFIFVDAD-----KDNYLNYHKRLIELVKVGGVIGYDN 190 (247)
Q Consensus 156 ~fD~v~id~~-----~~~~~~~l~~~~~~L~~gG~lv~d~ 190 (247)
+||+|++... ......+++.+.+.|+|||++++-.
T Consensus 184 ~fD~i~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 223 (286)
T 3m70_A 184 NYDFIVSTVVFMFLNRERVPSIIKNMKEHTNVGGYNLIVA 223 (286)
T ss_dssp CEEEEEECSSGGGSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CccEEEEccchhhCCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 8999998764 3455689999999999999977643
No 126
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.49 E-value=1.5e-13 Score=121.69 Aligned_cols=106 Identities=22% Similarity=0.351 Sum_probs=90.5
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCcee
Q 025824 79 NAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFD 158 (247)
Q Consensus 79 ~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~fD 158 (247)
+.++|||+|||+|..++.++.. + ..+|+++|+++.+++.|++++..+++.++++++++|+.+.++.+..+ .++||
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~-g-~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~---~~~fD 291 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIA-G-ADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKK---GEKFD 291 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHT-T-CSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHT---TCCEE
T ss_pred CCCeEEEecCCCCHHHHHHHHC-C-CCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhh---CCCCC
Confidence 6789999999999999999976 2 46999999999999999999999998668999999998877655321 46899
Q ss_pred EEEEcCCc------------cchHHHHHHHHhcCCCCeEEEEe
Q 025824 159 FIFVDADK------------DNYLNYHKRLIELVKVGGVIGYD 189 (247)
Q Consensus 159 ~v~id~~~------------~~~~~~l~~~~~~L~~gG~lv~d 189 (247)
+|++|.+. ..+..++..+.++|+|||++++.
T Consensus 292 ~Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~ 334 (396)
T 2as0_A 292 IVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTC 334 (396)
T ss_dssp EEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 99999874 45677888899999999988764
No 127
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.49 E-value=6.1e-14 Score=118.81 Aligned_cols=106 Identities=15% Similarity=0.179 Sum_probs=87.5
Q ss_pred hcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcC--C-CCcEEEEEecchhhhHHHHhhhcC
Q 025824 77 LVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAG--V-AHKIDFREGPALPVLDLLIQDEKN 153 (247)
Q Consensus 77 ~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g--~-~~~i~~~~gd~~~~l~~l~~~~~~ 153 (247)
..++++|||||||+|..+..+++..+ ..+++++|+++.+++.|++++...+ + .++++++.+|+.+.++..
T Consensus 76 ~~~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~------ 148 (283)
T 2i7c_A 76 SKEPKNVLVVGGGDGGIIRELCKYKS-VENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENV------ 148 (283)
T ss_dssp SSSCCEEEEEECTTSHHHHHHTTCTT-CCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHC------
T ss_pred CCCCCeEEEEeCCcCHHHHHHHHcCC-CCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhC------
Confidence 34678999999999999999987644 6899999999999999999986542 2 368999999998876543
Q ss_pred CCceeEEEEcCCc-----cch--HHHHHHHHhcCCCCeEEEEe
Q 025824 154 HGSFDFIFVDADK-----DNY--LNYHKRLIELVKVGGVIGYD 189 (247)
Q Consensus 154 ~~~fD~v~id~~~-----~~~--~~~l~~~~~~L~~gG~lv~d 189 (247)
.++||+|++|... ... ..+++.+.+.|+|||++++.
T Consensus 149 ~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~ 191 (283)
T 2i7c_A 149 TNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQ 191 (283)
T ss_dssp CSCEEEEEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCceEEEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 5789999998741 111 68999999999999999986
No 128
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.49 E-value=9.9e-14 Score=116.91 Aligned_cols=103 Identities=15% Similarity=0.150 Sum_probs=89.2
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCce
Q 025824 78 VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSF 157 (247)
Q Consensus 78 ~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~f 157 (247)
.+..+|||+|||+|+.++.+|+.- .++|+++|++|..++.+++|++.+++.++++++++|+.++.+ .+.|
T Consensus 124 ~~g~~VlD~~aG~G~~~i~~a~~g--~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~--------~~~~ 193 (278)
T 3k6r_A 124 KPDELVVDMFAGIGHLSLPIAVYG--KAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG--------ENIA 193 (278)
T ss_dssp CTTCEEEETTCTTTTTTHHHHHHT--CCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC--------CSCE
T ss_pred CCCCEEEEecCcCcHHHHHHHHhc--CCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhcc--------ccCC
Confidence 457899999999999999998762 469999999999999999999999999999999999987653 5789
Q ss_pred eEEEEcCCccchHHHHHHHHhcCCCCeEEEEecc
Q 025824 158 DFIFVDADKDNYLNYHKRLIELVKVGGVIGYDNT 191 (247)
Q Consensus 158 D~v~id~~~~~~~~~l~~~~~~L~~gG~lv~d~~ 191 (247)
|.|+++.+... ..+++.+.++|++||+|.++..
T Consensus 194 D~Vi~~~p~~~-~~~l~~a~~~lk~gG~ih~~~~ 226 (278)
T 3k6r_A 194 DRILMGYVVRT-HEFIPKALSIAKDGAIIHYHNT 226 (278)
T ss_dssp EEEEECCCSSG-GGGHHHHHHHEEEEEEEEEEEE
T ss_pred CEEEECCCCcH-HHHHHHHHHHcCCCCEEEEEee
Confidence 99999877433 4677888899999999987644
No 129
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.49 E-value=6.2e-14 Score=113.35 Aligned_cols=108 Identities=17% Similarity=0.197 Sum_probs=85.8
Q ss_pred HHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHH
Q 025824 69 QFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLI 148 (247)
Q Consensus 69 ~~l~~l~~~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~ 148 (247)
.++.......++.+|||+|||+|..+..+++. +.+++++|+++.+++.+++++...+ +++++++|+.+..+
T Consensus 41 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~d~~~~~~--- 111 (216)
T 3ofk_A 41 QLLRLSLSSGAVSNGLEIGCAAGAFTEKLAPH---CKRLTVIDVMPRAIGRACQRTKRWS---HISWAATDILQFST--- 111 (216)
T ss_dssp HHHHHHTTTSSEEEEEEECCTTSHHHHHHGGG---EEEEEEEESCHHHHHHHHHHTTTCS---SEEEEECCTTTCCC---
T ss_pred HHHHHHcccCCCCcEEEEcCCCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHhcccCC---CeEEEEcchhhCCC---
Confidence 34444444455679999999999999999876 4699999999999999999887643 79999999976642
Q ss_pred hhhcCCCceeEEEEcCCc------cchHHHHHHHHhcCCCCeEEEEec
Q 025824 149 QDEKNHGSFDFIFVDADK------DNYLNYHKRLIELVKVGGVIGYDN 190 (247)
Q Consensus 149 ~~~~~~~~fD~v~id~~~------~~~~~~l~~~~~~L~~gG~lv~d~ 190 (247)
.++||+|++...- ......++.+.++|+|||++++..
T Consensus 112 -----~~~fD~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 154 (216)
T 3ofk_A 112 -----AELFDLIVVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGS 154 (216)
T ss_dssp -----SCCEEEEEEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred -----CCCccEEEEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 5799999987542 223567899999999999999854
No 130
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.48 E-value=3.2e-13 Score=117.74 Aligned_cols=116 Identities=17% Similarity=0.189 Sum_probs=94.6
Q ss_pred HHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhh
Q 025824 65 ADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVL 144 (247)
Q Consensus 65 ~~~~~~l~~l~~~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l 144 (247)
+..+..+..++...+..+|||+|||+|..++.++....+..+++++|+++++++.|++|++.+|+. ++++.++|+.+..
T Consensus 189 ~~la~~l~~~~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~-~i~~~~~D~~~~~ 267 (354)
T 3tma_A 189 PVLAQALLRLADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLS-WIRFLRADARHLP 267 (354)
T ss_dssp HHHHHHHHHHTTCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCT-TCEEEECCGGGGG
T ss_pred HHHHHHHHHHhCCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCC-ceEEEeCChhhCc
Confidence 445555555555566789999999999999999987633789999999999999999999999987 8999999998754
Q ss_pred HHHHhhhcCCCceeEEEEcCCcc-----------chHHHHHHHHhcCCCCeEEEE
Q 025824 145 DLLIQDEKNHGSFDFIFVDADKD-----------NYLNYHKRLIELVKVGGVIGY 188 (247)
Q Consensus 145 ~~l~~~~~~~~~fD~v~id~~~~-----------~~~~~l~~~~~~L~~gG~lv~ 188 (247)
.. .+.||+|++|.+.. .|..+++.+.+.|+|||.+++
T Consensus 268 ~~-------~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i 315 (354)
T 3tma_A 268 RF-------FPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVAL 315 (354)
T ss_dssp GT-------CCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEE
T ss_pred cc-------cCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEE
Confidence 32 45789999987621 136778888899999999986
No 131
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.48 E-value=9.1e-14 Score=118.92 Aligned_cols=106 Identities=15% Similarity=0.164 Sum_probs=85.0
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHH---cCCCCcEEEEEecchhhhHHHHhhhcCC
Q 025824 78 VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQK---AGVAHKIDFREGPALPVLDLLIQDEKNH 154 (247)
Q Consensus 78 ~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~---~g~~~~i~~~~gd~~~~l~~l~~~~~~~ 154 (247)
.++++|||||||+|..+..+++..+ ..+|+++|+++.+++.|++++.. .....+++++.+|+.+.+... ..
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~-----~~ 167 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGT-VEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQT-----PD 167 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTT-CCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSS-----CT
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCC-CCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhc-----cC
Confidence 5678999999999999999997643 67999999999999999998843 222368999999998765421 14
Q ss_pred CceeEEEEcCCccch-------HHHHHHHHhcCCCCeEEEEe
Q 025824 155 GSFDFIFVDADKDNY-------LNYHKRLIELVKVGGVIGYD 189 (247)
Q Consensus 155 ~~fD~v~id~~~~~~-------~~~l~~~~~~L~~gG~lv~d 189 (247)
++||+|++|...... ..+++.+.+.|+|||++++.
T Consensus 168 ~~fDvIi~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 209 (304)
T 3bwc_A 168 NTYDVVIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQ 209 (304)
T ss_dssp TCEEEEEEECC---------CCHHHHHHHHHHEEEEEEEEEE
T ss_pred CceeEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 789999998752211 57899999999999999985
No 132
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.48 E-value=5.9e-14 Score=115.63 Aligned_cols=116 Identities=14% Similarity=0.177 Sum_probs=88.8
Q ss_pred HHHHHHHHHhhc----CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchh
Q 025824 67 EGQFLNMLLKLV----NAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALP 142 (247)
Q Consensus 67 ~~~~l~~l~~~~----~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~ 142 (247)
...++..++... ++.+|||||||+|..+..+++.. ..+++++|+++.+++.|++++...+ ..+++++.+|+.+
T Consensus 63 ~~~~~~~l~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~~d~~~ 139 (241)
T 2ex4_A 63 SRKFLQRFLREGPNKTGTSCALDCGAGIGRITKRLLLPL--FREVDMVDITEDFLVQAKTYLGEEG-KRVRNYFCCGLQD 139 (241)
T ss_dssp HHHHHHGGGC----CCCCSEEEEETCTTTHHHHHTTTTT--CSEEEEEESCHHHHHHHHHHTGGGG-GGEEEEEECCGGG
T ss_pred HHHHHHHHHHhcccCCCCCEEEEECCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHhhhcC-CceEEEEEcChhh
Confidence 345555554432 47899999999999999988764 4699999999999999999987764 2468999999865
Q ss_pred hhHHHHhhhcCCCceeEEEEcCCc-----cchHHHHHHHHhcCCCCeEEEEeccc
Q 025824 143 VLDLLIQDEKNHGSFDFIFVDADK-----DNYLNYHKRLIELVKVGGVIGYDNTL 192 (247)
Q Consensus 143 ~l~~l~~~~~~~~~fD~v~id~~~-----~~~~~~l~~~~~~L~~gG~lv~d~~~ 192 (247)
... ..++||+|++.... .....+++.+.++|+|||++++.+..
T Consensus 140 ~~~-------~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 187 (241)
T 2ex4_A 140 FTP-------EPDSYDVIWIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDNM 187 (241)
T ss_dssp CCC-------CSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred cCC-------CCCCEEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEcc
Confidence 432 14689999988652 22457889999999999999985543
No 133
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.47 E-value=1.2e-13 Score=113.54 Aligned_cols=107 Identities=13% Similarity=0.134 Sum_probs=86.0
Q ss_pred HHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHH
Q 025824 68 GQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLL 147 (247)
Q Consensus 68 ~~~l~~l~~~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l 147 (247)
..++..+....++.+|||||||+|..+..+++.. .+|+++|+++.+++.|++.+.. +++++++|+.+..+
T Consensus 31 ~~~~~~l~~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~~~-----~v~~~~~d~~~~~~-- 100 (250)
T 2p7i_A 31 PFMVRAFTPFFRPGNLLELGSFKGDFTSRLQEHF---NDITCVEASEEAISHAQGRLKD-----GITYIHSRFEDAQL-- 100 (250)
T ss_dssp HHHHHHHGGGCCSSCEEEESCTTSHHHHHHTTTC---SCEEEEESCHHHHHHHHHHSCS-----CEEEEESCGGGCCC--
T ss_pred HHHHHHHHhhcCCCcEEEECCCCCHHHHHHHHhC---CcEEEEeCCHHHHHHHHHhhhC-----CeEEEEccHHHcCc--
Confidence 3344444445677899999999999999998763 4899999999999999887543 69999999976521
Q ss_pred HhhhcCCCceeEEEEcCC---ccchHHHHHHHH-hcCCCCeEEEEec
Q 025824 148 IQDEKNHGSFDFIFVDAD---KDNYLNYHKRLI-ELVKVGGVIGYDN 190 (247)
Q Consensus 148 ~~~~~~~~~fD~v~id~~---~~~~~~~l~~~~-~~L~~gG~lv~d~ 190 (247)
+++||+|++... ..+....++.+. ++|+|||.+++..
T Consensus 101 ------~~~fD~v~~~~~l~~~~~~~~~l~~~~~~~LkpgG~l~i~~ 141 (250)
T 2p7i_A 101 ------PRRYDNIVLTHVLEHIDDPVALLKRINDDWLAEGGRLFLVC 141 (250)
T ss_dssp ------SSCEEEEEEESCGGGCSSHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred ------CCcccEEEEhhHHHhhcCHHHHHHHHHHHhcCCCCEEEEEc
Confidence 578999998765 235578999999 9999999999865
No 134
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.47 E-value=5.7e-13 Score=117.16 Aligned_cols=114 Identities=15% Similarity=0.043 Sum_probs=88.4
Q ss_pred hhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHH-------HHcCCC-CcEEEEEecchhhhHHH
Q 025824 76 KLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVI-------QKAGVA-HKIDFREGPALPVLDLL 147 (247)
Q Consensus 76 ~~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~-------~~~g~~-~~i~~~~gd~~~~l~~l 147 (247)
...+..+|||||||+|..++.++...+ ..+++|||+++.+++.|++++ +..|+. .+|++++||+.+.....
T Consensus 170 ~l~~gd~VLDLGCGtG~l~l~lA~~~g-~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~lp~~d 248 (438)
T 3uwp_A 170 KMTDDDLFVDLGSGVGQVVLQVAAATN-CKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLSEEWRE 248 (438)
T ss_dssp CCCTTCEEEEESCTTSHHHHHHHHHCC-CSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTTSHHHHH
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcccCCcccc
Confidence 345667999999999999999998765 457999999999999998865 345653 68999999997642110
Q ss_pred HhhhcCCCceeEEEEcCC--ccchHHHHHHHHhcCCCCeEEEEecccccc
Q 025824 148 IQDEKNHGSFDFIFVDAD--KDNYLNYHKRLIELVKVGGVIGYDNTLWNG 195 (247)
Q Consensus 148 ~~~~~~~~~fD~v~id~~--~~~~~~~l~~~~~~L~~gG~lv~d~~~~~g 195 (247)
.-..||+||+... .......+..+.+.|||||.||+.+.+.+.
T Consensus 249 -----~~~~aDVVf~Nn~~F~pdl~~aL~Ei~RvLKPGGrIVssE~f~p~ 293 (438)
T 3uwp_A 249 -----RIANTSVIFVNNFAFGPEVDHQLKERFANMKEGGRIVSSKPFAPL 293 (438)
T ss_dssp -----HHHTCSEEEECCTTCCHHHHHHHHHHHTTSCTTCEEEESSCSSCT
T ss_pred -----ccCCccEEEEcccccCchHHHHHHHHHHcCCCCcEEEEeecccCC
Confidence 0147999998654 345567778888999999999998776544
No 135
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.47 E-value=5e-13 Score=111.91 Aligned_cols=112 Identities=10% Similarity=0.080 Sum_probs=86.8
Q ss_pred hhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcc------hHHHHHHHHHHcCCCCcEEEEEec-chh-hhHHH
Q 025824 76 KLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRE------NYELGLPVIQKAGVAHKIDFREGP-ALP-VLDLL 147 (247)
Q Consensus 76 ~~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~------~~~~a~~~~~~~g~~~~i~~~~gd-~~~-~l~~l 147 (247)
...+..+|||||||+|..+..+++..++.++|+++|+++. +++.|++++...++.++++++.+| ... .++ +
T Consensus 40 ~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~-~ 118 (275)
T 3bkx_A 40 QVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSDDLGP-I 118 (275)
T ss_dssp TCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTTCCGG-G
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhhhccCC-C
Confidence 3456789999999999999999988644689999999997 999999999988887789999998 321 122 1
Q ss_pred HhhhcCCCceeEEEEcCCc---cchHHHHHHHHhcCCCCeEEEEecccc
Q 025824 148 IQDEKNHGSFDFIFVDADK---DNYLNYHKRLIELVKVGGVIGYDNTLW 193 (247)
Q Consensus 148 ~~~~~~~~~fD~v~id~~~---~~~~~~l~~~~~~L~~gG~lv~d~~~~ 193 (247)
..++||+|++.... .+...+++.+..+++|||.+++.+...
T Consensus 119 -----~~~~fD~v~~~~~l~~~~~~~~~~~~~~~l~~~gG~l~~~~~~~ 162 (275)
T 3bkx_A 119 -----ADQHFDRVVLAHSLWYFASANALALLFKNMAAVCDHVDVAEWSM 162 (275)
T ss_dssp -----TTCCCSEEEEESCGGGSSCHHHHHHHHHHHTTTCSEEEEEEECS
T ss_pred -----CCCCEEEEEEccchhhCCCHHHHHHHHHHHhCCCCEEEEEEecC
Confidence 25789999987652 233455666667777899999876554
No 136
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.47 E-value=4.2e-13 Score=110.96 Aligned_cols=109 Identities=19% Similarity=0.316 Sum_probs=86.8
Q ss_pred HHHHHHHHhh---cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhh
Q 025824 68 GQFLNMLLKL---VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVL 144 (247)
Q Consensus 68 ~~~l~~l~~~---~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l 144 (247)
..++..++.. .++.+|||+|||+|..+..+++. +.+++++|+++.+++.|++++...+. +++++++|+.+..
T Consensus 27 ~~~~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~~~~~--~v~~~~~d~~~~~ 101 (252)
T 1wzn_A 27 IDFVEEIFKEDAKREVRRVLDLACGTGIPTLELAER---GYEVVGLDLHEEMLRVARRKAKERNL--KIEFLQGDVLEIA 101 (252)
T ss_dssp HHHHHHHHHHTCSSCCCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTC--CCEEEESCGGGCC
T ss_pred HHHHHHHHHHhcccCCCEEEEeCCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHhcCC--ceEEEECChhhcc
Confidence 3445444443 34579999999999999999875 57999999999999999999988775 6999999987642
Q ss_pred HHHHhhhcCCCceeEEEEcCC------ccchHHHHHHHHhcCCCCeEEEEe
Q 025824 145 DLLIQDEKNHGSFDFIFVDAD------KDNYLNYHKRLIELVKVGGVIGYD 189 (247)
Q Consensus 145 ~~l~~~~~~~~~fD~v~id~~------~~~~~~~l~~~~~~L~~gG~lv~d 189 (247)
. .++||+|++... .......++.+.+.|+|||+++++
T Consensus 102 ~--------~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~ 144 (252)
T 1wzn_A 102 F--------KNEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFITD 144 (252)
T ss_dssp C--------CSCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred c--------CCCccEEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEe
Confidence 1 468999997532 134567888999999999999986
No 137
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=99.47 E-value=5.9e-13 Score=110.49 Aligned_cols=194 Identities=13% Similarity=0.085 Sum_probs=123.7
Q ss_pred ccCCcHHHHHHHHHhcCCCCCcHHHHHHHHHHHhCCCCccccCHHHHHHHH--HHHhh--cCCCEEEEEcccccHHHHHH
Q 025824 22 SLLQSDALYQYILETSVYPREPESMKELRELTAKHPWNIMTTSADEGQFLN--MLLKL--VNAKNTMEIGVYTGYSLLAT 97 (247)
Q Consensus 22 ~~~~~~~~~~y~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~--~l~~~--~~~~~vLEiG~g~G~st~~l 97 (247)
+...-++|.+|+..++. +..+.++.+.. .........++. .+.+. .-|..|+|+||..|.++..+
T Consensus 19 ~~~~~~~l~~~~~~~~~--~~~e~l~~~~~---------~~~~~~l~~~l~~~~l~~~i~~vpG~ivE~GV~rG~S~~~~ 87 (257)
T 3tos_A 19 ETETTQRLTKLLTNSPI--PTEELVNNLPL---------FLRRHQMTDLLSMDALYRQVLDVPGVIMEFGVRFGRHLGTF 87 (257)
T ss_dssp HHHHHHHHHHHHHTCCS--CGGGGGGCGGG---------GCCHHHHHHHHHHHHHHHHTTTSCSEEEEECCTTCHHHHHH
T ss_pred HHHHHHHHHHHHhcCCC--ChHHHHHhHHh---------hhhHHHHHHHHHHHHHHHHhhCCCCeEEEEecccCHHHHHH
Confidence 34445678888887543 33333333211 111123333333 33333 45789999999999999987
Q ss_pred Hhh------CCCCCEEEEEeCCcch------------------------HHHHHHHH------HHcCC-CCcEEEEEecc
Q 025824 98 ALA------LPDDGKILAMDINREN------------------------YELGLPVI------QKAGV-AHKIDFREGPA 140 (247)
Q Consensus 98 a~~------~~~~~~v~~iD~~~~~------------------------~~~a~~~~------~~~g~-~~~i~~~~gd~ 140 (247)
+.. .....+|+++|..+.+ .+..++.+ +..+. .++|+++.|++
T Consensus 88 a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~~~~~~~g~~~~~i~li~G~~ 167 (257)
T 3tos_A 88 AALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAHECSDFFGHVTQRSVLVEGDV 167 (257)
T ss_dssp HHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHHHTTSTTTTSCCSEEEEESCH
T ss_pred HHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHHhhhhhcCCCCCcEEEEEecH
Confidence 753 1236799999942211 11122222 23455 47899999999
Q ss_pred hhhhHHHHhhhcCCCceeEEEEcCCc-cchHHHHHHHHhcCCCCeEEEEecccccccccCCCCCcchhhhchHHHHHHHH
Q 025824 141 LPVLDLLIQDEKNHGSFDFIFVDADK-DNYLNYHKRLIELVKVGGVIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLEL 219 (247)
Q Consensus 141 ~~~l~~l~~~~~~~~~fD~v~id~~~-~~~~~~l~~~~~~L~~gG~lv~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 219 (247)
.+.++.+.++. +..+||+||+|+++ ..+..+++.+.++|+|||+|++||..+++ .+ ...+++++|
T Consensus 168 ~dTL~~~l~~~-~~~~~dlv~ID~D~Y~~t~~~le~~~p~l~~GGvIv~DD~~~~~------w~-------G~~~A~~ef 233 (257)
T 3tos_A 168 RETVPRYLAEN-PQTVIALAYFDLDLYEPTKAVLEAIRPYLTKGSIVAFDELDNPK------WP-------GENIAMRKV 233 (257)
T ss_dssp HHHHHHHHHHC-TTCCEEEEEECCCCHHHHHHHHHHHGGGEEEEEEEEESSTTCTT------CT-------HHHHHHHHH
T ss_pred HHHHHHHHHhC-CCCceEEEEEcCcccchHHHHHHHHHHHhCCCcEEEEcCCCCCC------Ch-------HHHHHHHHH
Confidence 99999876543 24579999999996 56777899999999999999999974322 11 123344444
Q ss_pred HHHHHcCCCeeEEeeecCCeeEEEE
Q 025824 220 NKALAADPRIEICMLPVGDGVTICR 244 (247)
Q Consensus 220 ~~~i~~~~~~~~~~lp~~dG~~i~~ 244 (247)
. .+.+.....+|++.+...++
T Consensus 234 ~----~~~~~~i~~~p~~~~~~y~~ 254 (257)
T 3tos_A 234 L----GLDHAPLRLLPGRPAPAYLR 254 (257)
T ss_dssp T----CTTSSCCEECTTCSCCEEEE
T ss_pred H----hhCCCeEEEccCCCCCEEEE
Confidence 3 45567777788888776654
No 138
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.47 E-value=1.9e-13 Score=120.51 Aligned_cols=105 Identities=22% Similarity=0.346 Sum_probs=90.2
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCcee
Q 025824 79 NAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFD 158 (247)
Q Consensus 79 ~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~fD 158 (247)
+..+|||+|||+|..++.++.. ..+|+++|+++.+++.|++|++.+++.+ ++++++|+.+.++.+... .++||
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~n~~~n~~~~-~~~~~~d~~~~~~~~~~~---~~~fD 281 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG---FREVVAVDSSAEALRRAEENARLNGLGN-VRVLEANAFDLLRRLEKE---GERFD 281 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH---EEEEEEEESCHHHHHHHHHHHHHTTCTT-EEEEESCHHHHHHHHHHT---TCCEE
T ss_pred CCCeEEEeeeccCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcCCCC-ceEEECCHHHHHHHHHhc---CCCee
Confidence 6679999999999999999987 4699999999999999999999999865 999999999887765321 46899
Q ss_pred EEEEcCCc------------cchHHHHHHHHhcCCCCeEEEEec
Q 025824 159 FIFVDADK------------DNYLNYHKRLIELVKVGGVIGYDN 190 (247)
Q Consensus 159 ~v~id~~~------------~~~~~~l~~~~~~L~~gG~lv~d~ 190 (247)
+|++|.+. ..+..++..+.++|+|||++++..
T Consensus 282 ~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 325 (382)
T 1wxx_A 282 LVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATAS 325 (382)
T ss_dssp EEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 99999874 445678888999999999998753
No 139
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.47 E-value=3.3e-13 Score=127.41 Aligned_cols=112 Identities=23% Similarity=0.355 Sum_probs=93.7
Q ss_pred HHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCC-CcEEEEEecchhhhHHHHhhh
Q 025824 73 MLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVA-HKIDFREGPALPVLDLLIQDE 151 (247)
Q Consensus 73 ~l~~~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~-~~i~~~~gd~~~~l~~l~~~~ 151 (247)
.+....+.++|||+|||+|..++.++..- ..+|+++|+++.+++.|++|++.+|+. ++++++++|+.+.++..
T Consensus 533 ~l~~~~~g~~VLDlg~GtG~~sl~aa~~g--a~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~---- 606 (703)
T 3v97_A 533 MLGQMSKGKDFLNLFSYTGSATVHAGLGG--ARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREA---- 606 (703)
T ss_dssp HHHHHCTTCEEEEESCTTCHHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHC----
T ss_pred HHHHhcCCCcEEEeeechhHHHHHHHHCC--CCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhc----
Confidence 34445578899999999999999988742 357999999999999999999999987 58999999999877653
Q ss_pred cCCCceeEEEEcCCc--------------cchHHHHHHHHhcCCCCeEEEEeccc
Q 025824 152 KNHGSFDFIFVDADK--------------DNYLNYHKRLIELVKVGGVIGYDNTL 192 (247)
Q Consensus 152 ~~~~~fD~v~id~~~--------------~~~~~~l~~~~~~L~~gG~lv~d~~~ 192 (247)
.++||+|++|.+. ..+..++..+.++|+|||+|++....
T Consensus 607 --~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 607 --NEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNK 659 (703)
T ss_dssp --CCCEEEEEECCCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred --CCCccEEEECCccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 5789999999862 24566788888999999999987654
No 140
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.47 E-value=2.3e-13 Score=120.26 Aligned_cols=99 Identities=22% Similarity=0.344 Sum_probs=83.7
Q ss_pred CCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCceeE
Q 025824 80 AKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDF 159 (247)
Q Consensus 80 ~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~fD~ 159 (247)
.++|||+|||+|..++.++.. +++|+++|+++.+++.|++|++.+|+.. ++.++|+.+.++.+ .+.||+
T Consensus 215 g~~VLDlg~GtG~~sl~~a~~---ga~V~avDis~~al~~a~~n~~~ng~~~--~~~~~D~~~~l~~~------~~~fD~ 283 (393)
T 4dmg_A 215 GERVLDVYSYVGGFALRAARK---GAYALAVDKDLEALGVLDQAALRLGLRV--DIRHGEALPTLRGL------EGPFHH 283 (393)
T ss_dssp TCEEEEESCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHTCCC--EEEESCHHHHHHTC------CCCEEE
T ss_pred CCeEEEcccchhHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHHHhCCCC--cEEEccHHHHHHHh------cCCCCE
Confidence 789999999999999999985 4569999999999999999999999864 46699998877654 244999
Q ss_pred EEEcCCc------------cchHHHHHHHHhcCCCCeEEEEe
Q 025824 160 IFVDADK------------DNYLNYHKRLIELVKVGGVIGYD 189 (247)
Q Consensus 160 v~id~~~------------~~~~~~l~~~~~~L~~gG~lv~d 189 (247)
|++|.+. ..+..++..+.++|+|||+|++-
T Consensus 284 Ii~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~ 325 (393)
T 4dmg_A 284 VLLDPPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLS 325 (393)
T ss_dssp EEECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred EEECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 9999874 34567888889999999999843
No 141
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.47 E-value=6.6e-13 Score=113.74 Aligned_cols=98 Identities=19% Similarity=0.230 Sum_probs=79.6
Q ss_pred cCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchh
Q 025824 63 TSADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALP 142 (247)
Q Consensus 63 ~~~~~~~~l~~l~~~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~ 142 (247)
+......++..++...+..+|||+|||+|..|+.+++.+++.++|+++|+++.+++.+++++++.|+ .+++++++|+.+
T Consensus 86 ~Qd~~s~l~~~~l~~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~-~~v~~~~~D~~~ 164 (309)
T 2b9e_A 86 LQDRASCLPAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGV-SCCELAEEDFLA 164 (309)
T ss_dssp ECCTGGGHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTC-CSEEEEECCGGG
T ss_pred EECHHHHHHHHHhCCCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC-CeEEEEeCChHh
Confidence 3455566666666667778999999999999999999876578999999999999999999999998 469999999876
Q ss_pred hhHHHHhhhcCCCceeEEEEcCC
Q 025824 143 VLDLLIQDEKNHGSFDFIFVDAD 165 (247)
Q Consensus 143 ~l~~l~~~~~~~~~fD~v~id~~ 165 (247)
..+... ...+||.|++|++
T Consensus 165 ~~~~~~----~~~~fD~Vl~D~P 183 (309)
T 2b9e_A 165 VSPSDP----RYHEVHYILLDPS 183 (309)
T ss_dssp SCTTCG----GGTTEEEEEECCC
T ss_pred cCcccc----ccCCCCEEEEcCC
Confidence 543210 0157999999976
No 142
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.46 E-value=2.2e-13 Score=111.63 Aligned_cols=104 Identities=15% Similarity=0.037 Sum_probs=83.3
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCce
Q 025824 78 VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSF 157 (247)
Q Consensus 78 ~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~f 157 (247)
.+..+|||+|||+|..+..+++..+ .++|+++|+++++++.++++.+.. .+++++.+|+.+....+. ..++|
T Consensus 73 ~~~~~VLDlGcG~G~~~~~la~~~~-~~~v~gvD~s~~~~~~a~~~~~~~---~~v~~~~~d~~~~~~~~~----~~~~~ 144 (230)
T 1fbn_A 73 KRDSKILYLGASAGTTPSHVADIAD-KGIVYAIEYAPRIMRELLDACAER---ENIIPILGDANKPQEYAN----IVEKV 144 (230)
T ss_dssp CTTCEEEEESCCSSHHHHHHHHHTT-TSEEEEEESCHHHHHHHHHHTTTC---TTEEEEECCTTCGGGGTT----TSCCE
T ss_pred CCCCEEEEEcccCCHHHHHHHHHcC-CcEEEEEECCHHHHHHHHHHhhcC---CCeEEEECCCCCcccccc----cCccE
Confidence 3567999999999999999999887 789999999999999999887654 579999999876211010 13689
Q ss_pred eEEEEcCC-ccchHHHHHHHHhcCCCCeEEEEe
Q 025824 158 DFIFVDAD-KDNYLNYHKRLIELVKVGGVIGYD 189 (247)
Q Consensus 158 D~v~id~~-~~~~~~~l~~~~~~L~~gG~lv~d 189 (247)
|+|+.+.. ......+++.+.+.|+|||.+++-
T Consensus 145 D~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 145 DVIYEDVAQPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp EEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEEecCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence 99997754 333466799999999999999985
No 143
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.46 E-value=1.9e-13 Score=120.53 Aligned_cols=117 Identities=15% Similarity=0.288 Sum_probs=91.7
Q ss_pred hcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHc-----C-CC-CcEEEEEecchhhhHHHHh
Q 025824 77 LVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKA-----G-VA-HKIDFREGPALPVLDLLIQ 149 (247)
Q Consensus 77 ~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~-----g-~~-~~i~~~~gd~~~~l~~l~~ 149 (247)
..++.+|||+|||+|..+..+++..+++++|+++|+++.+++.|+++++.. | .. .+++++++|+.+... +..
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~-~~~ 159 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLAT-AEP 159 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGG-CBS
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhh-ccc
Confidence 346789999999999999999998755789999999999999999998765 3 22 589999999976421 000
Q ss_pred hhcCCCceeEEEEcCC---ccchHHHHHHHHhcCCCCeEEEEeccccc
Q 025824 150 DEKNHGSFDFIFVDAD---KDNYLNYHKRLIELVKVGGVIGYDNTLWN 194 (247)
Q Consensus 150 ~~~~~~~fD~v~id~~---~~~~~~~l~~~~~~L~~gG~lv~d~~~~~ 194 (247)
.....++||+|+.... ..+....++.+.++|+|||++++.+....
T Consensus 160 ~~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~ 207 (383)
T 4fsd_A 160 EGVPDSSVDIVISNCVCNLSTNKLALFKEIHRVLRDGGELYFSDVYAD 207 (383)
T ss_dssp CCCCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEES
T ss_pred CCCCCCCEEEEEEccchhcCCCHHHHHHHHHHHcCCCCEEEEEEeccc
Confidence 0002578999998765 24567899999999999999999765543
No 144
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.46 E-value=3.5e-14 Score=119.01 Aligned_cols=97 Identities=9% Similarity=-0.008 Sum_probs=80.9
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHc--CC-CCcEEEEEecchhhhHHHHhhhcCC
Q 025824 78 VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKA--GV-AHKIDFREGPALPVLDLLIQDEKNH 154 (247)
Q Consensus 78 ~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~--g~-~~~i~~~~gd~~~~l~~l~~~~~~~ 154 (247)
.++++|||||||+|..+..+++. + .+|+++|+++++++.|++++... ++ .++++++.+|+.+.+
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~-~--~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~---------- 137 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKY-D--THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI---------- 137 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTS-S--CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC----------
T ss_pred CCCCEEEEEeCCcCHHHHHHHhC-C--CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH----------
Confidence 46789999999999999999887 4 89999999999999999887431 12 358999999997653
Q ss_pred CceeEEEEcCCccchHHHHHHHHhcCCCCeEEEEe
Q 025824 155 GSFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYD 189 (247)
Q Consensus 155 ~~fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv~d 189 (247)
++||+|++|... ...+++.+.+.|+|||++++.
T Consensus 138 ~~fD~Ii~d~~d--p~~~~~~~~~~L~pgG~lv~~ 170 (262)
T 2cmg_A 138 KKYDLIFCLQEP--DIHRIDGLKRMLKEDGVFISV 170 (262)
T ss_dssp CCEEEEEESSCC--CHHHHHHHHTTEEEEEEEEEE
T ss_pred hhCCEEEECCCC--hHHHHHHHHHhcCCCcEEEEE
Confidence 479999999753 235899999999999999984
No 145
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=99.46 E-value=4.1e-13 Score=116.38 Aligned_cols=106 Identities=13% Similarity=0.172 Sum_probs=84.7
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcC---CC----CcEEEEEecchhhhHHHHhhh
Q 025824 79 NAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAG---VA----HKIDFREGPALPVLDLLIQDE 151 (247)
Q Consensus 79 ~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g---~~----~~i~~~~gd~~~~l~~l~~~~ 151 (247)
++++||+||||.|..+..+++.. ..+|+++|+++..++.|++++...+ +. ++++++.+|+.+++..+...
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~--~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~- 264 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLK--PKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKE- 264 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTC--CSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHH-
T ss_pred CCCEEEEEECChhHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhcc-
Confidence 57899999999999999988763 3799999999999999999986432 22 27999999999988764221
Q ss_pred cCCCceeEEEEcCCc-c--------chHHHHHHH----HhcCCCCeEEEEe
Q 025824 152 KNHGSFDFIFVDADK-D--------NYLNYHKRL----IELVKVGGVIGYD 189 (247)
Q Consensus 152 ~~~~~fD~v~id~~~-~--------~~~~~l~~~----~~~L~~gG~lv~d 189 (247)
.++||+||+|... . ...++++.+ .+.|+|||++++.
T Consensus 265 --~~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~q 313 (364)
T 2qfm_A 265 --GREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQ 313 (364)
T ss_dssp --TCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred --CCCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEE
Confidence 4789999999753 1 225666776 8999999999975
No 146
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.46 E-value=2.8e-13 Score=110.67 Aligned_cols=110 Identities=22% Similarity=0.290 Sum_probs=88.0
Q ss_pred CHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhh
Q 025824 64 SADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPV 143 (247)
Q Consensus 64 ~~~~~~~l~~l~~~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~ 143 (247)
.+.....+...+...+..+|||+|||+|..+..++... .+|+++|+++.+++.+++++...+ +++++.+|+.+.
T Consensus 55 ~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~~---~v~~~~~d~~~~ 128 (231)
T 1vbf_A 55 ALNLGIFMLDELDLHKGQKVLEIGTGIGYYTALIAEIV---DKVVSVEINEKMYNYASKLLSYYN---NIKLILGDGTLG 128 (231)
T ss_dssp CHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHS---SEEEEEESCHHHHHHHHHHHTTCS---SEEEEESCGGGC
T ss_pred CHHHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHHc---CEEEEEeCCHHHHHHHHHHHhhcC---CeEEEECCcccc
Confidence 45555555555555667899999999999999999874 699999999999999999988765 799999999764
Q ss_pred hHHHHhhhcCCCceeEEEEcCCccchHHHHHHHHhcCCCCeEEEEe
Q 025824 144 LDLLIQDEKNHGSFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYD 189 (247)
Q Consensus 144 l~~l~~~~~~~~~fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv~d 189 (247)
++. .++||+|+++....+.. +.+.+.|+|||++++.
T Consensus 129 ~~~-------~~~fD~v~~~~~~~~~~---~~~~~~L~pgG~l~~~ 164 (231)
T 1vbf_A 129 YEE-------EKPYDRVVVWATAPTLL---CKPYEQLKEGGIMILP 164 (231)
T ss_dssp CGG-------GCCEEEEEESSBBSSCC---HHHHHTEEEEEEEEEE
T ss_pred ccc-------CCCccEEEECCcHHHHH---HHHHHHcCCCcEEEEE
Confidence 331 46899999987654443 4678899999999975
No 147
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.46 E-value=3.4e-13 Score=107.85 Aligned_cols=110 Identities=14% Similarity=0.048 Sum_probs=87.1
Q ss_pred HHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhh
Q 025824 71 LNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQD 150 (247)
Q Consensus 71 l~~l~~~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~ 150 (247)
+..++...++.+|||+|||+|..+..+++. +.+++++|+++.+++.|++++...+. +++++++|+.+.. +
T Consensus 21 l~~~~~~~~~~~vLdiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~--~--- 90 (202)
T 2kw5_A 21 LVSVANQIPQGKILCLAEGEGRNACFLASL---GYEVTAVDQSSVGLAKAKQLAQEKGV--KITTVQSNLADFD--I--- 90 (202)
T ss_dssp HHHHHHHSCSSEEEECCCSCTHHHHHHHTT---TCEEEEECSSHHHHHHHHHHHHHHTC--CEEEECCBTTTBS--C---
T ss_pred HHHHHHhCCCCCEEEECCCCCHhHHHHHhC---CCeEEEEECCHHHHHHHHHHHHhcCC--ceEEEEcChhhcC--C---
Confidence 333444334449999999999999999875 56999999999999999999988776 6999999987642 1
Q ss_pred hcCCCceeEEEEcCC---ccchHHHHHHHHhcCCCCeEEEEeccc
Q 025824 151 EKNHGSFDFIFVDAD---KDNYLNYHKRLIELVKVGGVIGYDNTL 192 (247)
Q Consensus 151 ~~~~~~fD~v~id~~---~~~~~~~l~~~~~~L~~gG~lv~d~~~ 192 (247)
..++||+|++... ......+++.+.+.|+|||.+++....
T Consensus 91 --~~~~fD~v~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 133 (202)
T 2kw5_A 91 --VADAWEGIVSIFCHLPSSLRQQLYPKVYQGLKPGGVFILEGFA 133 (202)
T ss_dssp --CTTTCSEEEEECCCCCHHHHHHHHHHHHTTCCSSEEEEEEEEC
T ss_pred --CcCCccEEEEEhhcCCHHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 2478999997543 234567889999999999999987543
No 148
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.46 E-value=1.1e-13 Score=113.02 Aligned_cols=112 Identities=16% Similarity=0.183 Sum_probs=86.6
Q ss_pred HHHHHHHH-hhcCCCEEEEEcccccHHHHHHHhhCCC-----CCEEEEEeCCcchHHHHHHHHHHcCC----CCcEEEEE
Q 025824 68 GQFLNMLL-KLVNAKNTMEIGVYTGYSLLATALALPD-----DGKILAMDINRENYELGLPVIQKAGV----AHKIDFRE 137 (247)
Q Consensus 68 ~~~l~~l~-~~~~~~~vLEiG~g~G~st~~la~~~~~-----~~~v~~iD~~~~~~~~a~~~~~~~g~----~~~i~~~~ 137 (247)
..++..+. ...+..+|||||||+|+.+..+++..+. .++|+++|+++++++.|++++...+. ..+++++.
T Consensus 72 ~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~ 151 (227)
T 1r18_A 72 AFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVE 151 (227)
T ss_dssp HHHHHHTTTTCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEE
T ss_pred HHHHHHHHhhCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEE
Confidence 33344333 2345679999999999999999986542 36999999999999999999987652 25799999
Q ss_pred ecchhhhHHHHhhhcCCCceeEEEEcCCccchHHHHHHHHhcCCCCeEEEEe
Q 025824 138 GPALPVLDLLIQDEKNHGSFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYD 189 (247)
Q Consensus 138 gd~~~~l~~l~~~~~~~~~fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv~d 189 (247)
+|+.+.++. .++||+|+++...... .+.+.+.|+|||.+++.
T Consensus 152 ~d~~~~~~~-------~~~fD~I~~~~~~~~~---~~~~~~~LkpgG~lvi~ 193 (227)
T 1r18_A 152 GDGRKGYPP-------NAPYNAIHVGAAAPDT---PTELINQLASGGRLIVP 193 (227)
T ss_dssp SCGGGCCGG-------GCSEEEEEECSCBSSC---CHHHHHTEEEEEEEEEE
T ss_pred CCcccCCCc-------CCCccEEEECCchHHH---HHHHHHHhcCCCEEEEE
Confidence 999764432 3689999998875443 36788999999999975
No 149
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.45 E-value=4.3e-13 Score=110.20 Aligned_cols=106 Identities=14% Similarity=0.084 Sum_probs=79.3
Q ss_pred hcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCc
Q 025824 77 LVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGS 156 (247)
Q Consensus 77 ~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~ 156 (247)
..+..+|||+|||+|+.+..+++.+.+.++|+++|+++.+++...+..+.. .++.++++|+........ ..++
T Consensus 74 l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r---~nv~~i~~Da~~~~~~~~----~~~~ 146 (232)
T 3id6_C 74 IRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR---PNIFPLLADARFPQSYKS----VVEN 146 (232)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC---TTEEEEECCTTCGGGTTT----TCCC
T ss_pred CCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc---CCeEEEEcccccchhhhc----cccc
Confidence 345689999999999999999998776899999999999875544444332 479999999865321100 1468
Q ss_pred eeEEEEcCCccchHHHHH-HHHhcCCCCeEEEEe
Q 025824 157 FDFIFVDADKDNYLNYHK-RLIELVKVGGVIGYD 189 (247)
Q Consensus 157 fD~v~id~~~~~~~~~l~-~~~~~L~~gG~lv~d 189 (247)
||+||+|.........+. .+.+.|||||.+++.
T Consensus 147 ~D~I~~d~a~~~~~~il~~~~~~~LkpGG~lvis 180 (232)
T 3id6_C 147 VDVLYVDIAQPDQTDIAIYNAKFFLKVNGDMLLV 180 (232)
T ss_dssp EEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred eEEEEecCCChhHHHHHHHHHHHhCCCCeEEEEE
Confidence 999999987655555444 445599999999975
No 150
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.45 E-value=4.5e-13 Score=117.28 Aligned_cols=108 Identities=14% Similarity=0.161 Sum_probs=90.3
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhh-HHHHhhhcCCCc
Q 025824 78 VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVL-DLLIQDEKNHGS 156 (247)
Q Consensus 78 ~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l-~~l~~~~~~~~~ 156 (247)
.++.+|||||||+|..+..+++..| +.+++++|+ +.+++.|++++...++.++++++.+|+.+.- + + .++
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~------p~~ 248 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNK-EVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVP-F------PTG 248 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHST-TCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCC-C------CCC
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCC-CCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCC-C------CCC
Confidence 4678999999999999999999987 789999999 9999999999998888789999999997631 1 1 258
Q ss_pred eeEEEEcCC-----ccchHHHHHHHHhcCCCCeEEEEeccccc
Q 025824 157 FDFIFVDAD-----KDNYLNYHKRLIELVKVGGVIGYDNTLWN 194 (247)
Q Consensus 157 fD~v~id~~-----~~~~~~~l~~~~~~L~~gG~lv~d~~~~~ 194 (247)
||+|++... ......+++.+.+.|+|||.|++.+..+.
T Consensus 249 ~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 291 (363)
T 3dp7_A 249 FDAVWMSQFLDCFSEEEVISILTRVAQSIGKDSKVYIMETLWD 291 (363)
T ss_dssp CSEEEEESCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTT
T ss_pred cCEEEEechhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccC
Confidence 999998543 23345778999999999999988776654
No 151
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.45 E-value=3.8e-13 Score=110.32 Aligned_cols=103 Identities=15% Similarity=0.126 Sum_probs=82.5
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhh--hHHHHhhhcCCC
Q 025824 78 VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPV--LDLLIQDEKNHG 155 (247)
Q Consensus 78 ~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~--l~~l~~~~~~~~ 155 (247)
.+..+|||+|||+|..+..+++..++.++|+++|+++.+++.+.++.+.. .+++++++|+.+. ++.. .+
T Consensus 76 ~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~---~~v~~~~~d~~~~~~~~~~------~~ 146 (233)
T 2ipx_A 76 KPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR---TNIIPVIEDARHPHKYRML------IA 146 (233)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC---TTEEEECSCTTCGGGGGGG------CC
T ss_pred CCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc---CCeEEEEcccCChhhhccc------CC
Confidence 35679999999999999999998744689999999999888877777664 5799999999763 2221 57
Q ss_pred ceeEEEEcCCcc-chHHHHHHHHhcCCCCeEEEEe
Q 025824 156 SFDFIFVDADKD-NYLNYHKRLIELVKVGGVIGYD 189 (247)
Q Consensus 156 ~fD~v~id~~~~-~~~~~l~~~~~~L~~gG~lv~d 189 (247)
+||+|++|.... ....++..+.+.|+|||++++.
T Consensus 147 ~~D~V~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~ 181 (233)
T 2ipx_A 147 MVDVIFADVAQPDQTRIVALNAHTFLRNGGHFVIS 181 (233)
T ss_dssp CEEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cEEEEEEcCCCccHHHHHHHHHHHHcCCCeEEEEE
Confidence 899999987632 2244577899999999999983
No 152
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.45 E-value=5.4e-13 Score=117.46 Aligned_cols=114 Identities=12% Similarity=0.112 Sum_probs=92.7
Q ss_pred CHHHHHHHHHHHhhc-----CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEe
Q 025824 64 SADEGQFLNMLLKLV-----NAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREG 138 (247)
Q Consensus 64 ~~~~~~~l~~l~~~~-----~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~g 138 (247)
.+....++..+.... +..+|||+|||+|..+..+++. +.+|+++|+++.+++.|++++...++. ++++++
T Consensus 213 d~~t~~ll~~l~~~l~~~~~~~~~VLDlGcG~G~~~~~la~~---g~~V~gvDis~~al~~A~~n~~~~~~~--v~~~~~ 287 (381)
T 3dmg_A 213 DPASLLLLEALQERLGPEGVRGRQVLDLGAGYGALTLPLARM---GAEVVGVEDDLASVLSLQKGLEANALK--AQALHS 287 (381)
T ss_dssp CHHHHHHHHHHHHHHCTTTTTTCEEEEETCTTSTTHHHHHHT---TCEEEEEESBHHHHHHHHHHHHHTTCC--CEEEEC
T ss_pred CHHHHHHHHHHHHhhcccCCCCCEEEEEeeeCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCC--eEEEEc
Confidence 355556666665543 5679999999999999999986 569999999999999999999998863 899999
Q ss_pred cchhhhHHHHhhhcCCCceeEEEEcCC--------ccchHHHHHHHHhcCCCCeEEEEe
Q 025824 139 PALPVLDLLIQDEKNHGSFDFIFVDAD--------KDNYLNYHKRLIELVKVGGVIGYD 189 (247)
Q Consensus 139 d~~~~l~~l~~~~~~~~~fD~v~id~~--------~~~~~~~l~~~~~~L~~gG~lv~d 189 (247)
|+.+.... .++||+|+++.+ ......+++.+.+.|+|||.+++.
T Consensus 288 D~~~~~~~-------~~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv 339 (381)
T 3dmg_A 288 DVDEALTE-------EARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLV 339 (381)
T ss_dssp STTTTSCT-------TCCEEEEEECCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred chhhcccc-------CCCeEEEEECCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEE
Confidence 99876431 379999999854 234567889999999999999973
No 153
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.45 E-value=1.3e-13 Score=115.17 Aligned_cols=103 Identities=16% Similarity=0.186 Sum_probs=79.8
Q ss_pred HHHHHHhhc-CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHH
Q 025824 70 FLNMLLKLV-NAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLI 148 (247)
Q Consensus 70 ~l~~l~~~~-~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~ 148 (247)
++..+.... ...+|||||||+|..+..|+.. ..+|+++|+++.+++.|++ ..+++++++++.+. + +
T Consensus 29 l~~~l~~~~~~~~~vLDvGcGtG~~~~~l~~~---~~~v~gvD~s~~ml~~a~~-------~~~v~~~~~~~e~~-~-~- 95 (257)
T 4hg2_A 29 LFRWLGEVAPARGDALDCGCGSGQASLGLAEF---FERVHAVDPGEAQIRQALR-------HPRVTYAVAPAEDT-G-L- 95 (257)
T ss_dssp HHHHHHHHSSCSSEEEEESCTTTTTHHHHHTT---CSEEEEEESCHHHHHTCCC-------CTTEEEEECCTTCC-C-C-
T ss_pred HHHHHHHhcCCCCCEEEEcCCCCHHHHHHHHh---CCEEEEEeCcHHhhhhhhh-------cCCceeehhhhhhh-c-c-
Confidence 344444433 3468999999999999999875 4699999999999877653 25799999999764 2 1
Q ss_pred hhhcCCCceeEEEEcCC--ccchHHHHHHHHhcCCCCeEEEEe
Q 025824 149 QDEKNHGSFDFIFVDAD--KDNYLNYHKRLIELVKVGGVIGYD 189 (247)
Q Consensus 149 ~~~~~~~~fD~v~id~~--~~~~~~~l~~~~~~L~~gG~lv~d 189 (247)
.+++||+|++... .-+....+.++.++|||||+|++-
T Consensus 96 ----~~~sfD~v~~~~~~h~~~~~~~~~e~~rvLkpgG~l~~~ 134 (257)
T 4hg2_A 96 ----PPASVDVAIAAQAMHWFDLDRFWAELRRVARPGAVFAAV 134 (257)
T ss_dssp ----CSSCEEEEEECSCCTTCCHHHHHHHHHHHEEEEEEEEEE
T ss_pred ----cCCcccEEEEeeehhHhhHHHHHHHHHHHcCCCCEEEEE
Confidence 2689999998644 334678899999999999999863
No 154
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.45 E-value=4.5e-13 Score=107.56 Aligned_cols=117 Identities=13% Similarity=0.163 Sum_probs=90.5
Q ss_pred HHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhh
Q 025824 65 ADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVL 144 (247)
Q Consensus 65 ~~~~~~l~~l~~~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l 144 (247)
.....++..+....++.+|||+|||+|..+..++... +.+++++|+++.+++.+++++...+ .+++++++|+.+.
T Consensus 9 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~~~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~d~~~~- 83 (209)
T 2p8j_A 9 PQLYRFLKYCNESNLDKTVLDCGAGGDLPPLSIFVED--GYKTYGIEISDLQLKKAENFSRENN--FKLNISKGDIRKL- 83 (209)
T ss_dssp THHHHHHHHHHHSSSCSEEEEESCCSSSCTHHHHHHT--TCEEEEEECCHHHHHHHHHHHHHHT--CCCCEEECCTTSC-
T ss_pred hhHHHHHHHHhccCCCCEEEEECCCCCHHHHHHHHhC--CCEEEEEECCHHHHHHHHHHHHhcC--CceEEEECchhhC-
Confidence 3445666666666677899999999999865554432 5799999999999999999998766 3689999998764
Q ss_pred HHHHhhhcCCCceeEEEEcCC-----ccchHHHHHHHHhcCCCCeEEEEeccc
Q 025824 145 DLLIQDEKNHGSFDFIFVDAD-----KDNYLNYHKRLIELVKVGGVIGYDNTL 192 (247)
Q Consensus 145 ~~l~~~~~~~~~fD~v~id~~-----~~~~~~~l~~~~~~L~~gG~lv~d~~~ 192 (247)
+ + ..++||+|++... .......++.+.+.|+|||++++....
T Consensus 84 ~-~-----~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 130 (209)
T 2p8j_A 84 P-F-----KDESMSFVYSYGTIFHMRKNDVKEAIDEIKRVLKPGGLACINFLT 130 (209)
T ss_dssp C-S-----CTTCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred C-C-----CCCceeEEEEcChHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEec
Confidence 2 1 2478999998644 145577889999999999999987643
No 155
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.44 E-value=6e-13 Score=115.91 Aligned_cols=106 Identities=16% Similarity=0.187 Sum_probs=87.9
Q ss_pred hhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCC
Q 025824 76 KLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHG 155 (247)
Q Consensus 76 ~~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~ 155 (247)
...+.++|||+|||+|..+..+++. + ..+|+++|++ ++++.|+++++..++.++++++++|+.+.. + ..+
T Consensus 63 ~~~~~~~VLDvGcG~G~~~~~la~~-g-~~~v~gvD~s-~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~--~-----~~~ 132 (349)
T 3q7e_A 63 HLFKDKVVLDVGSGTGILCMFAAKA-G-ARKVIGIECS-SISDYAVKIVKANKLDHVVTIIKGKVEEVE--L-----PVE 132 (349)
T ss_dssp HHHTTCEEEEESCTTSHHHHHHHHT-T-CSEEEEEECS-THHHHHHHHHHHTTCTTTEEEEESCTTTCC--C-----SSS
T ss_pred ccCCCCEEEEEeccchHHHHHHHHC-C-CCEEEEECcH-HHHHHHHHHHHHcCCCCcEEEEECcHHHcc--C-----CCC
Confidence 3467889999999999999999987 3 5699999999 599999999999999888999999997651 1 247
Q ss_pred ceeEEEEcCC------ccchHHHHHHHHhcCCCCeEEEEecc
Q 025824 156 SFDFIFVDAD------KDNYLNYHKRLIELVKVGGVIGYDNT 191 (247)
Q Consensus 156 ~fD~v~id~~------~~~~~~~l~~~~~~L~~gG~lv~d~~ 191 (247)
+||+|+.+.. ......++..+.++|+|||+++.+..
T Consensus 133 ~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~ 174 (349)
T 3q7e_A 133 KVDIIISEWMGYCLFYESMLNTVLHARDKWLAPDGLIFPDRA 174 (349)
T ss_dssp CEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEESCEE
T ss_pred ceEEEEEccccccccCchhHHHHHHHHHHhCCCCCEEccccc
Confidence 9999998642 34566788888899999999985433
No 156
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.44 E-value=4.7e-13 Score=117.74 Aligned_cols=105 Identities=14% Similarity=0.160 Sum_probs=87.7
Q ss_pred hcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCc
Q 025824 77 LVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGS 156 (247)
Q Consensus 77 ~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~ 156 (247)
..+.++|||+|||+|..++.+++. + ..+|+++|++ .+++.|+++++..++.++++++++|+.+... .++
T Consensus 61 ~~~~~~VLDlGcGtG~ls~~la~~-g-~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~--------~~~ 129 (376)
T 3r0q_C 61 HFEGKTVLDVGTGSGILAIWSAQA-G-ARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDISL--------PEK 129 (376)
T ss_dssp TTTTCEEEEESCTTTHHHHHHHHT-T-CSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCCC--------SSC
T ss_pred cCCCCEEEEeccCcCHHHHHHHhc-C-CCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcCc--------CCc
Confidence 456789999999999999999986 2 3599999999 9999999999999998899999999976521 378
Q ss_pred eeEEEEcCC------ccchHHHHHHHHhcCCCCeEEEEeccc
Q 025824 157 FDFIFVDAD------KDNYLNYHKRLIELVKVGGVIGYDNTL 192 (247)
Q Consensus 157 fD~v~id~~------~~~~~~~l~~~~~~L~~gG~lv~d~~~ 192 (247)
||+|+++.. ......++..+.++|+|||+++++...
T Consensus 130 ~D~Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~~~~ 171 (376)
T 3r0q_C 130 VDVIISEWMGYFLLRESMFDSVISARDRWLKPTGVMYPSHAR 171 (376)
T ss_dssp EEEEEECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESSEEE
T ss_pred ceEEEEcChhhcccchHHHHHHHHHHHhhCCCCeEEEEecCe
Confidence 999998652 133566888888999999999976554
No 157
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.44 E-value=5.6e-13 Score=107.46 Aligned_cols=109 Identities=17% Similarity=0.192 Sum_probs=87.0
Q ss_pred HHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHH
Q 025824 67 EGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDL 146 (247)
Q Consensus 67 ~~~~l~~l~~~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~ 146 (247)
...++..+....+..+|||+|||+|..+..++.. +.+++++|+++.+++.+++ .+. .+++++++|+.+..
T Consensus 34 ~~~~~~~l~~~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~~D~s~~~~~~a~~----~~~-~~~~~~~~d~~~~~-- 103 (218)
T 3ou2_A 34 APAALERLRAGNIRGDVLELASGTGYWTRHLSGL---ADRVTALDGSAEMIAEAGR----HGL-DNVEFRQQDLFDWT-- 103 (218)
T ss_dssp HHHHHHHHTTTTSCSEEEEESCTTSHHHHHHHHH---SSEEEEEESCHHHHHHHGG----GCC-TTEEEEECCTTSCC--
T ss_pred HHHHHHHHhcCCCCCeEEEECCCCCHHHHHHHhc---CCeEEEEeCCHHHHHHHHh----cCC-CCeEEEecccccCC--
Confidence 3445555544556689999999999999999987 5799999999999999888 444 57999999997662
Q ss_pred HHhhhcCCCceeEEEEcCCcc-----chHHHHHHHHhcCCCCeEEEEecc
Q 025824 147 LIQDEKNHGSFDFIFVDADKD-----NYLNYHKRLIELVKVGGVIGYDNT 191 (247)
Q Consensus 147 l~~~~~~~~~fD~v~id~~~~-----~~~~~l~~~~~~L~~gG~lv~d~~ 191 (247)
..++||+|++..... .....++.+.+.|+|||.+++.+.
T Consensus 104 ------~~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 147 (218)
T 3ou2_A 104 ------PDRQWDAVFFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDV 147 (218)
T ss_dssp ------CSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ------CCCceeEEEEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 268999999876522 136788999999999999998754
No 158
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.44 E-value=2.9e-13 Score=112.48 Aligned_cols=114 Identities=14% Similarity=0.157 Sum_probs=89.9
Q ss_pred HHHHHHHHhh---cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhh
Q 025824 68 GQFLNMLLKL---VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVL 144 (247)
Q Consensus 68 ~~~l~~l~~~---~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l 144 (247)
...+..++.. .++.+|||+|||+|..+..+++.. +.+|+++|+++.+++.|++++... .+++++++|+.+.
T Consensus 41 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~- 114 (266)
T 3ujc_A 41 LEATKKILSDIELNENSKVLDIGSGLGGGCMYINEKY--GAHTHGIDICSNIVNMANERVSGN---NKIIFEANDILTK- 114 (266)
T ss_dssp HHHHHHHTTTCCCCTTCEEEEETCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHTCCSC---TTEEEEECCTTTC-
T ss_pred HHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhhcC---CCeEEEECccccC-
Confidence 3334444433 456799999999999999999875 579999999999999998876554 5799999999764
Q ss_pred HHHHhhhcCCCceeEEEEcCCc-----cchHHHHHHHHhcCCCCeEEEEecccc
Q 025824 145 DLLIQDEKNHGSFDFIFVDADK-----DNYLNYHKRLIELVKVGGVIGYDNTLW 193 (247)
Q Consensus 145 ~~l~~~~~~~~~fD~v~id~~~-----~~~~~~l~~~~~~L~~gG~lv~d~~~~ 193 (247)
+ + ..++||+|++.... .+...+++.+.+.|+|||.+++.+...
T Consensus 115 ~-~-----~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 162 (266)
T 3ujc_A 115 E-F-----PENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDYCA 162 (266)
T ss_dssp C-C-----CTTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred C-C-----CCCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEecc
Confidence 2 1 25799999987552 456778999999999999999976543
No 159
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.43 E-value=1.1e-12 Score=111.00 Aligned_cols=119 Identities=15% Similarity=0.132 Sum_probs=92.0
Q ss_pred HHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCC---CcEEEEEecch
Q 025824 65 ADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVA---HKIDFREGPAL 141 (247)
Q Consensus 65 ~~~~~~l~~l~~~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~---~~i~~~~gd~~ 141 (247)
.....++..++...++.+|||||||+|..+..++.. +.+|+++|+++.+++.|+++....+.. .++.+..+|+.
T Consensus 43 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~ 119 (293)
T 3thr_A 43 AEYKAWLLGLLRQHGCHRVLDVACGTGVDSIMLVEE---GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWL 119 (293)
T ss_dssp HHHHHHHHHHHHHTTCCEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGG
T ss_pred HHHHHHHHHHhcccCCCEEEEecCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChh
Confidence 444566666666677899999999999999999986 459999999999999999987654432 36889999987
Q ss_pred hhhHHHHhhhcCCCceeEEEEcC-C---ccc-------hHHHHHHHHhcCCCCeEEEEec
Q 025824 142 PVLDLLIQDEKNHGSFDFIFVDA-D---KDN-------YLNYHKRLIELVKVGGVIGYDN 190 (247)
Q Consensus 142 ~~l~~l~~~~~~~~~fD~v~id~-~---~~~-------~~~~l~~~~~~L~~gG~lv~d~ 190 (247)
+....+. ..++||+|++.+ . ..+ ...+++.+.++|+|||++++..
T Consensus 120 ~~~~~~~----~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (293)
T 3thr_A 120 TLDKDVP----AGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDH 175 (293)
T ss_dssp GHHHHSC----CTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred hCccccc----cCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEe
Confidence 6532221 257999999862 2 222 6789999999999999999753
No 160
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.43 E-value=6.7e-13 Score=116.72 Aligned_cols=104 Identities=22% Similarity=0.271 Sum_probs=89.6
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHc---------------CCCCcEEEEEecchh
Q 025824 78 VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKA---------------GVAHKIDFREGPALP 142 (247)
Q Consensus 78 ~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~---------------g~~~~i~~~~gd~~~ 142 (247)
.++.+|||+|||+|..++.+++..+ ..+|+++|++++.++.+++|++.+ ++.+ ++++++|+.+
T Consensus 46 ~~~~~VLDl~aGtG~~~l~~a~~~~-~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~-i~v~~~Da~~ 123 (378)
T 2dul_A 46 LNPKIVLDALSATGIRGIRFALETP-AEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKT-IVINHDDANR 123 (378)
T ss_dssp HCCSEEEESSCTTSHHHHHHHHHSS-CSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSE-EEEEESCHHH
T ss_pred cCCCEEEECCCchhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCc-eEEEcCcHHH
Confidence 4778999999999999999999876 578999999999999999999998 7744 9999999988
Q ss_pred hhHHHHhhhcCCCceeEEEEcCCccchHHHHHHHHhcCCCCeEEEEec
Q 025824 143 VLDLLIQDEKNHGSFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYDN 190 (247)
Q Consensus 143 ~l~~l~~~~~~~~~fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv~d~ 190 (247)
.+... .++||+|++|.. .....+++.+.+.|++||++++..
T Consensus 124 ~~~~~------~~~fD~I~lDP~-~~~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 124 LMAER------HRYFHFIDLDPF-GSPMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp HHHHS------TTCEEEEEECCS-SCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHhc------cCCCCEEEeCCC-CCHHHHHHHHHHhcCCCCEEEEEe
Confidence 76543 358999999975 334688899999999999998754
No 161
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.43 E-value=1.3e-13 Score=114.44 Aligned_cols=118 Identities=14% Similarity=0.157 Sum_probs=87.3
Q ss_pred HHHHHHHhhc---CCCEEEEEcccccHHHHHHHhh--CCCCCEEEEEeCCcchHHHHHHHHHHc---CCCCc--------
Q 025824 69 QFLNMLLKLV---NAKNTMEIGVYTGYSLLATALA--LPDDGKILAMDINRENYELGLPVIQKA---GVAHK-------- 132 (247)
Q Consensus 69 ~~l~~l~~~~---~~~~vLEiG~g~G~st~~la~~--~~~~~~v~~iD~~~~~~~~a~~~~~~~---g~~~~-------- 132 (247)
.++..++... ++.+|||+|||+|..++.++.. .+ +.+|+++|+++.+++.|++++... ++.++
T Consensus 38 ~l~~~~l~~~~~~~~~~vLD~gcGsG~~~~~la~~~~~~-~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~ 116 (250)
T 1o9g_A 38 EIFQRALARLPGDGPVTLWDPCCGSGYLLTVLGLLHRRS-LRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQS 116 (250)
T ss_dssp HHHHHHHHTSSCCSCEEEEETTCTTSHHHHHHHHHTGGG-EEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcccCCCCeEEECCCCCCHHHHHHHHHhccC-CCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhh
Confidence 4455444432 4568999999999999999987 33 579999999999999999998866 44333
Q ss_pred -----------------EE-------------EEEecchhhhHHHHhhhcCCCceeEEEEcCCc------------cchH
Q 025824 133 -----------------ID-------------FREGPALPVLDLLIQDEKNHGSFDFIFVDADK------------DNYL 170 (247)
Q Consensus 133 -----------------i~-------------~~~gd~~~~l~~l~~~~~~~~~fD~v~id~~~------------~~~~ 170 (247)
++ ++++|+.+.++..... ...+||+|+++.+. ..+.
T Consensus 117 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~--~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~ 194 (250)
T 1o9g_A 117 ERFGKPSYLEAAQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVL--AGSAPDVVLTDLPYGERTHWEGQVPGQPVA 194 (250)
T ss_dssp HHHCCHHHHHHHHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHH--TTCCCSEEEEECCGGGSSSSSSCCCHHHHH
T ss_pred hhcccccchhhhhhhhhhhhhccccccccccceeeccccccccccccc--CCCCceEEEeCCCeeccccccccccccHHH
Confidence 66 9999987754310000 03489999997641 2245
Q ss_pred HHHHHHHhcCCCCeEEEEe
Q 025824 171 NYHKRLIELVKVGGVIGYD 189 (247)
Q Consensus 171 ~~l~~~~~~L~~gG~lv~d 189 (247)
.+++.+.+.|+|||++++.
T Consensus 195 ~~l~~~~~~LkpgG~l~~~ 213 (250)
T 1o9g_A 195 GLLRSLASALPAHAVIAVT 213 (250)
T ss_dssp HHHHHHHHHSCTTCEEEEE
T ss_pred HHHHHHHHhcCCCcEEEEe
Confidence 7888999999999999973
No 162
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.43 E-value=6.8e-13 Score=108.83 Aligned_cols=110 Identities=17% Similarity=0.129 Sum_probs=88.1
Q ss_pred HHHHHHHHHhhc--CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhh
Q 025824 67 EGQFLNMLLKLV--NAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVL 144 (247)
Q Consensus 67 ~~~~l~~l~~~~--~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l 144 (247)
...++..++... ++.+|||+|||+|..+..+++. +.+++++|+++.+++.+++++...+. +++++++|+.+..
T Consensus 23 ~~~~~~~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~---~~~~~~~D~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~ 97 (246)
T 1y8c_A 23 WSDFIIEKCVENNLVFDDYLDLACGTGNLTENLCPK---FKNTWAVDLSQEMLSEAENKFRSQGL--KPRLACQDISNLN 97 (246)
T ss_dssp HHHHHHHHHHTTTCCTTEEEEETCTTSTTHHHHGGG---SSEEEEECSCHHHHHHHHHHHHHTTC--CCEEECCCGGGCC
T ss_pred HHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHC---CCcEEEEECCHHHHHHHHHHHhhcCC--CeEEEecccccCC
Confidence 344444444433 6789999999999999999876 46999999999999999999988765 6899999987642
Q ss_pred HHHHhhhcCCCceeEEEEcC-C---c---cchHHHHHHHHhcCCCCeEEEEe
Q 025824 145 DLLIQDEKNHGSFDFIFVDA-D---K---DNYLNYHKRLIELVKVGGVIGYD 189 (247)
Q Consensus 145 ~~l~~~~~~~~~fD~v~id~-~---~---~~~~~~l~~~~~~L~~gG~lv~d 189 (247)
. .++||+|++.. . . ......++.+.+.|+|||+++++
T Consensus 98 ~--------~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 141 (246)
T 1y8c_A 98 I--------NRKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFD 141 (246)
T ss_dssp C--------SCCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred c--------cCCceEEEEcCccccccCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 1 36899999876 2 1 45577889999999999999984
No 163
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.42 E-value=4.9e-13 Score=108.26 Aligned_cols=111 Identities=20% Similarity=0.199 Sum_probs=86.7
Q ss_pred HHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhH
Q 025824 66 DEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLD 145 (247)
Q Consensus 66 ~~~~~l~~l~~~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~ 145 (247)
....++..+. ..++.+|||+|||+|..+..+++. +.+++++|+++.+++.+++++. .+++++++|+.+...
T Consensus 33 ~~~~~l~~~~-~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~-----~~~~~~~~d~~~~~~ 103 (220)
T 3hnr_A 33 HYEDILEDVV-NKSFGNVLEFGVGTGNLTNKLLLA---GRTVYGIEPSREMRMIAKEKLP-----KEFSITEGDFLSFEV 103 (220)
T ss_dssp THHHHHHHHH-HTCCSEEEEECCTTSHHHHHHHHT---TCEEEEECSCHHHHHHHHHHSC-----TTCCEESCCSSSCCC
T ss_pred HHHHHHHHhh-ccCCCeEEEeCCCCCHHHHHHHhC---CCeEEEEeCCHHHHHHHHHhCC-----CceEEEeCChhhcCC
Confidence 3345555543 347789999999999999999986 5799999999999999988764 468999999976421
Q ss_pred HHHhhhcCCCceeEEEEcCCcc---ch--HHHHHHHHhcCCCCeEEEEecccc
Q 025824 146 LLIQDEKNHGSFDFIFVDADKD---NY--LNYHKRLIELVKVGGVIGYDNTLW 193 (247)
Q Consensus 146 ~l~~~~~~~~~fD~v~id~~~~---~~--~~~l~~~~~~L~~gG~lv~d~~~~ 193 (247)
.++||+|++..... .. ...++.+.+.|+|||.+++.+..+
T Consensus 104 --------~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 148 (220)
T 3hnr_A 104 --------PTSIDTIVSTYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFADTIF 148 (220)
T ss_dssp --------CSCCSEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEEECB
T ss_pred --------CCCeEEEEECcchhcCChHHHHHHHHHHHHhcCCCCEEEEEeccc
Confidence 37899999876522 22 238899999999999999876543
No 164
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.42 E-value=1.6e-13 Score=113.91 Aligned_cols=98 Identities=12% Similarity=0.202 Sum_probs=76.1
Q ss_pred HHHHHHHHHHHhhc-----CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEec
Q 025824 65 ADEGQFLNMLLKLV-----NAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGP 139 (247)
Q Consensus 65 ~~~~~~l~~l~~~~-----~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd 139 (247)
+....++..++... ++.+|||+|||+|..+..++...+ +.+|+++|+++.+++.|++++...++.++++++++|
T Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d 124 (254)
T 2h00_A 46 LNYIHWVEDLIGHQDSDKSTLRRGIDIGTGASCIYPLLGATLN-GWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVP 124 (254)
T ss_dssp HHHHHHHHHHHCCCCGGGCCCCEEEEESCTTTTHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECC
T ss_pred HHHHHHHHHHHhhccccCCCCCEEEEeCCChhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcc
Confidence 45566666666433 456999999999999999998765 689999999999999999999999988889999999
Q ss_pred chhh-hHHHHhhhcCCCceeEEEEcCC
Q 025824 140 ALPV-LDLLIQDEKNHGSFDFIFVDAD 165 (247)
Q Consensus 140 ~~~~-l~~l~~~~~~~~~fD~v~id~~ 165 (247)
+.+. +..+... .+++||+|+++.+
T Consensus 125 ~~~~~~~~~~~~--~~~~fD~i~~npp 149 (254)
T 2h00_A 125 QKTLLMDALKEE--SEIIYDFCMCNPP 149 (254)
T ss_dssp TTCSSTTTSTTC--CSCCBSEEEECCC
T ss_pred hhhhhhhhhhcc--cCCcccEEEECCC
Confidence 7652 2222100 0158999999855
No 165
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.42 E-value=1.4e-12 Score=112.74 Aligned_cols=106 Identities=19% Similarity=0.188 Sum_probs=86.2
Q ss_pred HHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcC
Q 025824 74 LLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKN 153 (247)
Q Consensus 74 l~~~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~ 153 (247)
.....++++|||+|||+|..+..+++. + ..+|+++|++ .+++.|+++++..++.++++++.+|+.+.. + .
T Consensus 33 ~~~~~~~~~VLDiGcGtG~ls~~la~~-g-~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--~-----~ 102 (328)
T 1g6q_1 33 NKDLFKDKIVLDVGCGTGILSMFAAKH-G-AKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDVH--L-----P 102 (328)
T ss_dssp HHHHHTTCEEEEETCTTSHHHHHHHHT-C-CSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTSC--C-----S
T ss_pred hHhhcCCCEEEEecCccHHHHHHHHHC-C-CCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhcc--C-----C
Confidence 344567889999999999999998876 3 4699999999 599999999999999889999999997642 1 1
Q ss_pred CCceeEEEEcCC------ccchHHHHHHHHhcCCCCeEEEEe
Q 025824 154 HGSFDFIFVDAD------KDNYLNYHKRLIELVKVGGVIGYD 189 (247)
Q Consensus 154 ~~~fD~v~id~~------~~~~~~~l~~~~~~L~~gG~lv~d 189 (247)
.++||+|+++.. ......++..+.++|+|||+++.+
T Consensus 103 ~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li~~ 144 (328)
T 1g6q_1 103 FPKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIFPD 144 (328)
T ss_dssp SSCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred CCcccEEEEeCchhhcccHHHHHHHHHHHHhhcCCCeEEEEe
Confidence 478999998742 233567788888999999999854
No 166
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.42 E-value=1.6e-12 Score=113.99 Aligned_cols=106 Identities=15% Similarity=0.173 Sum_probs=89.8
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCce
Q 025824 78 VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSF 157 (247)
Q Consensus 78 ~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~f 157 (247)
.+..+|||||||+|..+..+++..| +.+++++|+ +.+++.|++++...++.++++++.+|..+.+ ...|
T Consensus 201 ~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~---------p~~~ 269 (369)
T 3gwz_A 201 SGAATAVDIGGGRGSLMAAVLDAFP-GLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFFETI---------PDGA 269 (369)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTTCC---------CSSC
T ss_pred ccCcEEEEeCCCccHHHHHHHHHCC-CCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCCCCC---------CCCc
Confidence 3568999999999999999999987 789999999 9999999999999998889999999997432 2389
Q ss_pred eEEEEcCC-----ccchHHHHHHHHhcCCCCeEEEEeccccc
Q 025824 158 DFIFVDAD-----KDNYLNYHKRLIELVKVGGVIGYDNTLWN 194 (247)
Q Consensus 158 D~v~id~~-----~~~~~~~l~~~~~~L~~gG~lv~d~~~~~ 194 (247)
|+|++... .......++.+.+.|+|||.+++.+..++
T Consensus 270 D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~ 311 (369)
T 3gwz_A 270 DVYLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVIDNLID 311 (369)
T ss_dssp SEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCC
T ss_pred eEEEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 99998654 22234689999999999999999777654
No 167
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.42 E-value=1.1e-12 Score=113.88 Aligned_cols=103 Identities=18% Similarity=0.174 Sum_probs=84.8
Q ss_pred hcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCc
Q 025824 77 LVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGS 156 (247)
Q Consensus 77 ~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~ 156 (247)
..++.+|||||||+|..+..+++. + ..+|+++|+++ +++.|+++++..++.++++++.+|+.+.. + ..++
T Consensus 62 ~~~~~~VLDiGcGtG~ls~~la~~-g-~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--~-----~~~~ 131 (340)
T 2fyt_A 62 IFKDKVVLDVGCGTGILSMFAAKA-G-AKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVH--L-----PVEK 131 (340)
T ss_dssp GTTTCEEEEETCTTSHHHHHHHHT-T-CSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSC--C-----SCSC
T ss_pred hcCCCEEEEeeccCcHHHHHHHHc-C-CCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhc--C-----CCCc
Confidence 456789999999999999999886 3 46999999996 99999999999998889999999997641 1 2478
Q ss_pred eeEEEEcCC------ccchHHHHHHHHhcCCCCeEEEEe
Q 025824 157 FDFIFVDAD------KDNYLNYHKRLIELVKVGGVIGYD 189 (247)
Q Consensus 157 fD~v~id~~------~~~~~~~l~~~~~~L~~gG~lv~d 189 (247)
||+|+.+.. .......+..+.+.|+|||+++.+
T Consensus 132 ~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 170 (340)
T 2fyt_A 132 VDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVYPD 170 (340)
T ss_dssp EEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEESC
T ss_pred EEEEEEcCchhhccCHHHHHHHHHHHHhhcCCCcEEEcc
Confidence 999997652 233456788888999999999843
No 168
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.42 E-value=7.9e-13 Score=114.13 Aligned_cols=106 Identities=15% Similarity=0.080 Sum_probs=89.5
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCcee
Q 025824 79 NAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFD 158 (247)
Q Consensus 79 ~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~fD 158 (247)
+..+|||||||+|..+..+++..| +.+++++|+ +.+++.|++++...++.++++++.+|..+.+ ..+||
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---------p~~~D 237 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTAHE-DLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFFDPL---------PAGAG 237 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSCC---------CCSCS
T ss_pred CCCEEEEeCCChhHHHHHHHHHCC-CCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCCCCC---------CCCCc
Confidence 357999999999999999999987 789999999 9999999999999998889999999997432 23899
Q ss_pred EEEEcCC-----ccchHHHHHHHHhcCCCCeEEEEecccccc
Q 025824 159 FIFVDAD-----KDNYLNYHKRLIELVKVGGVIGYDNTLWNG 195 (247)
Q Consensus 159 ~v~id~~-----~~~~~~~l~~~~~~L~~gG~lv~d~~~~~g 195 (247)
+|++... .......++.+.+.|+|||.+++.+...+.
T Consensus 238 ~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 279 (332)
T 3i53_A 238 GYVLSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGD 279 (332)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC-
T ss_pred EEEEehhhccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCCC
Confidence 9998654 222467899999999999999988776554
No 169
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.42 E-value=1.2e-12 Score=110.64 Aligned_cols=105 Identities=15% Similarity=0.100 Sum_probs=86.4
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCce
Q 025824 78 VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSF 157 (247)
Q Consensus 78 ~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~f 157 (247)
.++.+|||+|||+|..+..++.. + ..+++++|+++.+++.|++++...+...+++++++|+.+.... ..++|
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~-~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~------~~~~f 134 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLKYERA-G-IGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMD------LGKEF 134 (298)
T ss_dssp CTTCEEEEETCTTTTTHHHHHHH-T-CSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCC------CSSCE
T ss_pred CCCCeEEEECCCCCHHHHHHHHC-C-CCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccC------CCCCc
Confidence 56789999999999999988875 2 4699999999999999999999888777899999998764210 15789
Q ss_pred eEEEEcCCc-------cchHHHHHHHHhcCCCCeEEEEec
Q 025824 158 DFIFVDADK-------DNYLNYHKRLIELVKVGGVIGYDN 190 (247)
Q Consensus 158 D~v~id~~~-------~~~~~~l~~~~~~L~~gG~lv~d~ 190 (247)
|+|++.... .....+++.+.++|+|||.+++..
T Consensus 135 D~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 174 (298)
T 1ri5_A 135 DVISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTV 174 (298)
T ss_dssp EEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CEEEECchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 999987542 344678899999999999999754
No 170
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.42 E-value=1.1e-12 Score=114.11 Aligned_cols=103 Identities=17% Similarity=0.153 Sum_probs=85.3
Q ss_pred hhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCC
Q 025824 76 KLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHG 155 (247)
Q Consensus 76 ~~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~ 155 (247)
...++.+|||||||+|..+..+++. + ..+|+++|+++ +++.|+++++..++.++++++.+|+.+.. + .+
T Consensus 47 ~~~~~~~VLDiGcGtG~ls~~la~~-g-~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~~--~------~~ 115 (348)
T 2y1w_A 47 TDFKDKIVLDVGCGSGILSFFAAQA-G-ARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVS--L------PE 115 (348)
T ss_dssp GGTTTCEEEEETCTTSHHHHHHHHT-T-CSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCC--C------SS
T ss_pred ccCCcCEEEEcCCCccHHHHHHHhC-C-CCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhCC--C------CC
Confidence 3356789999999999999998875 3 56999999996 88999999999998889999999997642 1 36
Q ss_pred ceeEEEEcCC-----ccchHHHHHHHHhcCCCCeEEEEe
Q 025824 156 SFDFIFVDAD-----KDNYLNYHKRLIELVKVGGVIGYD 189 (247)
Q Consensus 156 ~fD~v~id~~-----~~~~~~~l~~~~~~L~~gG~lv~d 189 (247)
+||+|+.... .......+..+.+.|+|||++++.
T Consensus 116 ~~D~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 116 QVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp CEEEEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESC
T ss_pred ceeEEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEEEe
Confidence 8999998754 245567788888999999999853
No 171
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.42 E-value=1.3e-12 Score=113.57 Aligned_cols=108 Identities=16% Similarity=0.151 Sum_probs=90.9
Q ss_pred CCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCceeE
Q 025824 80 AKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDF 159 (247)
Q Consensus 80 ~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~fD~ 159 (247)
+.+|||||||+|..+..+++..| +.+++++|+ +.+++.+++++...++.++++++.+|..+..+.. .+.||+
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~------~~~~D~ 251 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHP-QLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFE------GGAADV 251 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCT-TCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGT------TCCEEE
T ss_pred CCEEEEeCCCcCHHHHHHHHhCC-CCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccC------CCCccE
Confidence 78999999999999999999987 789999999 8999999999999998889999999997653211 457999
Q ss_pred EEEcCC-----ccchHHHHHHHHhcCCCCeEEEEecccccc
Q 025824 160 IFVDAD-----KDNYLNYHKRLIELVKVGGVIGYDNTLWNG 195 (247)
Q Consensus 160 v~id~~-----~~~~~~~l~~~~~~L~~gG~lv~d~~~~~g 195 (247)
|++... .......++.+.+.|+|||.+++.+..++.
T Consensus 252 v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 292 (352)
T 3mcz_A 252 VMLNDCLHYFDAREAREVIGHAAGLVKPGGALLILTMTMND 292 (352)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCCT
T ss_pred EEEecccccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCC
Confidence 998654 223467899999999999999987766543
No 172
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.42 E-value=1.4e-12 Score=105.79 Aligned_cols=102 Identities=12% Similarity=0.106 Sum_probs=83.8
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCcee
Q 025824 79 NAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFD 158 (247)
Q Consensus 79 ~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~fD 158 (247)
++.+|||+|||+|..+..+++..+ +++++|+++.+++.|++++...+ .+++++++|+.+.. + ..++||
T Consensus 38 ~~~~vLDlG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~d~~~~~--~-----~~~~~D 105 (227)
T 1ve3_A 38 KRGKVLDLACGVGGFSFLLEDYGF---EVVGVDISEDMIRKAREYAKSRE--SNVEFIVGDARKLS--F-----EDKTFD 105 (227)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTT--CCCEEEECCTTSCC--S-----CTTCEE
T ss_pred CCCeEEEEeccCCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHhcC--CCceEEECchhcCC--C-----CCCcEE
Confidence 467999999999999999988643 99999999999999999998876 57999999987632 1 146899
Q ss_pred EEEEcCC--c---cchHHHHHHHHhcCCCCeEEEEeccc
Q 025824 159 FIFVDAD--K---DNYLNYHKRLIELVKVGGVIGYDNTL 192 (247)
Q Consensus 159 ~v~id~~--~---~~~~~~l~~~~~~L~~gG~lv~d~~~ 192 (247)
+|++... . .+....++.+.+.|+|||.+++....
T Consensus 106 ~v~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 106 YVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp EEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EEEEcCchHhCCHHHHHHHHHHHHHHcCCCcEEEEEecC
Confidence 9998755 2 24467889999999999999886543
No 173
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.41 E-value=1.1e-12 Score=104.94 Aligned_cols=109 Identities=13% Similarity=0.032 Sum_probs=87.2
Q ss_pred HHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhH
Q 025824 66 DEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLD 145 (247)
Q Consensus 66 ~~~~~l~~l~~~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~ 145 (247)
....++..+.... +.+|||+|||+|..+..++.. +.+++++|+++.+++.++++. .+++++++|+.+. +
T Consensus 29 ~~~~~l~~~~~~~-~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~------~~~~~~~~d~~~~-~ 97 (203)
T 3h2b_A 29 PDRVLIEPWATGV-DGVILDVGSGTGRWTGHLASL---GHQIEGLEPATRLVELARQTH------PSVTFHHGTITDL-S 97 (203)
T ss_dssp TTHHHHHHHHHHC-CSCEEEETCTTCHHHHHHHHT---TCCEEEECCCHHHHHHHHHHC------TTSEEECCCGGGG-G
T ss_pred HHHHHHHHHhccC-CCeEEEecCCCCHHHHHHHhc---CCeEEEEeCCHHHHHHHHHhC------CCCeEEeCccccc-c
Confidence 3455566555544 789999999999999999986 569999999999999998862 3689999999764 2
Q ss_pred HHHhhhcCCCceeEEEEcCC-----ccchHHHHHHHHhcCCCCeEEEEecc
Q 025824 146 LLIQDEKNHGSFDFIFVDAD-----KDNYLNYHKRLIELVKVGGVIGYDNT 191 (247)
Q Consensus 146 ~l~~~~~~~~~fD~v~id~~-----~~~~~~~l~~~~~~L~~gG~lv~d~~ 191 (247)
+ ..++||+|++... .......++.+.+.|+|||.+++...
T Consensus 98 -~-----~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 142 (203)
T 3h2b_A 98 -D-----SPKRWAGLLAWYSLIHMGPGELPDALVALRMAVEDGGGLLMSFF 142 (203)
T ss_dssp -G-----SCCCEEEEEEESSSTTCCTTTHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred -c-----CCCCeEEEEehhhHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEc
Confidence 1 2579999998654 24668899999999999999998654
No 174
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.41 E-value=2.4e-13 Score=111.10 Aligned_cols=105 Identities=19% Similarity=0.121 Sum_probs=82.3
Q ss_pred HHHHHHHHHHHh--hcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchh
Q 025824 65 ADEGQFLNMLLK--LVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALP 142 (247)
Q Consensus 65 ~~~~~~l~~l~~--~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~ 142 (247)
+....++..+.. ..++.+|||+|||+|..+..++.. +.+|+++|+++.+++.++++ ..+++++++|+.+
T Consensus 32 ~~~~~l~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~------~~~~~~~~~d~~~ 102 (226)
T 3m33_A 32 PDPELTFDLWLSRLLTPQTRVLEAGCGHGPDAARFGPQ---AARWAAYDFSPELLKLARAN------APHADVYEWNGKG 102 (226)
T ss_dssp SCTTHHHHHHHHHHCCTTCEEEEESCTTSHHHHHHGGG---SSEEEEEESCHHHHHHHHHH------CTTSEEEECCSCS
T ss_pred CCHHHHHHHHHHhcCCCCCeEEEeCCCCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHh------CCCceEEEcchhh
Confidence 333444444443 246789999999999999999987 57999999999999999987 2469999999965
Q ss_pred hhHHHHhhhcC-CCceeEEEEcCCccchHHHHHHHHhcCCCCeEEE
Q 025824 143 VLDLLIQDEKN-HGSFDFIFVDADKDNYLNYHKRLIELVKVGGVIG 187 (247)
Q Consensus 143 ~l~~l~~~~~~-~~~fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv 187 (247)
.++. . .++||+|++.. .....++.+.+.|+|||.++
T Consensus 103 ~~~~------~~~~~fD~v~~~~---~~~~~l~~~~~~LkpgG~l~ 139 (226)
T 3m33_A 103 ELPA------GLGAPFGLIVSRR---GPTSVILRLPELAAPDAHFL 139 (226)
T ss_dssp SCCT------TCCCCEEEEEEES---CCSGGGGGHHHHEEEEEEEE
T ss_pred ccCC------cCCCCEEEEEeCC---CHHHHHHHHHHHcCCCcEEE
Confidence 5442 2 46899999874 34566788899999999999
No 175
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.41 E-value=1.3e-12 Score=108.50 Aligned_cols=100 Identities=22% Similarity=0.200 Sum_probs=82.4
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCce
Q 025824 78 VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSF 157 (247)
Q Consensus 78 ~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~f 157 (247)
.++.+|||+|||+|..+..+++. +.+++++|+++.+++.+++++ .+...+++++++|+.+. + + ..++|
T Consensus 38 ~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~--~~~~~~~~~~~~d~~~~-~-~-----~~~~f 105 (263)
T 2yqz_A 38 GEEPVFLELGVGTGRIALPLIAR---GYRYIALDADAAMLEVFRQKI--AGVDRKVQVVQADARAI-P-L-----PDESV 105 (263)
T ss_dssp SSCCEEEEETCTTSTTHHHHHTT---TCEEEEEESCHHHHHHHHHHT--TTSCTTEEEEESCTTSC-C-S-----CTTCE
T ss_pred CCCCEEEEeCCcCCHHHHHHHHC---CCEEEEEECCHHHHHHHHHHh--hccCCceEEEEcccccC-C-C-----CCCCe
Confidence 45679999999999999999875 579999999999999999988 23346799999999654 2 1 25789
Q ss_pred eEEEEcCCc---cchHHHHHHHHhcCCCCeEEEEe
Q 025824 158 DFIFVDADK---DNYLNYHKRLIELVKVGGVIGYD 189 (247)
Q Consensus 158 D~v~id~~~---~~~~~~l~~~~~~L~~gG~lv~d 189 (247)
|+|++.... .+....++.+.+.|+|||++++.
T Consensus 106 D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 106 HGVIVVHLWHLVPDWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp EEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred eEEEECCchhhcCCHHHHHHHHHHHCCCCcEEEEE
Confidence 999987652 34578899999999999999986
No 176
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.41 E-value=4.7e-13 Score=110.95 Aligned_cols=98 Identities=15% Similarity=0.153 Sum_probs=82.6
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCce
Q 025824 78 VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSF 157 (247)
Q Consensus 78 ~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~f 157 (247)
.++.+|||+|||+|..+..+++..| +++++++|+++.+++.++++ ..+++++++|+.+.. . .++|
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~~~-~~~v~~~D~s~~~~~~a~~~------~~~~~~~~~d~~~~~--~------~~~f 96 (259)
T 2p35_A 32 ERVLNGYDLGCGPGNSTELLTDRYG-VNVITGIDSDDDMLEKAADR------LPNTNFGKADLATWK--P------AQKA 96 (259)
T ss_dssp SCCSSEEEETCTTTHHHHHHHHHHC-TTSEEEEESCHHHHHHHHHH------STTSEEEECCTTTCC--C------SSCE
T ss_pred CCCCEEEEecCcCCHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHh------CCCcEEEECChhhcC--c------cCCc
Confidence 4567999999999999999998876 78999999999999999887 246899999987643 1 5789
Q ss_pred eEEEEcCC---ccchHHHHHHHHhcCCCCeEEEEec
Q 025824 158 DFIFVDAD---KDNYLNYHKRLIELVKVGGVIGYDN 190 (247)
Q Consensus 158 D~v~id~~---~~~~~~~l~~~~~~L~~gG~lv~d~ 190 (247)
|+|++... ..+....++.+.+.|+|||.+++..
T Consensus 97 D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~ 132 (259)
T 2p35_A 97 DLLYANAVFQWVPDHLAVLSQLMDQLESGGVLAVQM 132 (259)
T ss_dssp EEEEEESCGGGSTTHHHHHHHHGGGEEEEEEEEEEE
T ss_pred CEEEEeCchhhCCCHHHHHHHHHHhcCCCeEEEEEe
Confidence 99998765 2356788999999999999999854
No 177
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.41 E-value=8.9e-13 Score=109.83 Aligned_cols=105 Identities=11% Similarity=0.070 Sum_probs=82.6
Q ss_pred HHHHHHhh-cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHH
Q 025824 70 FLNMLLKL-VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLI 148 (247)
Q Consensus 70 ~l~~l~~~-~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~ 148 (247)
++..+... .++.+|||+|||+|..+..+++. +.+|+++|+++.+++.|++++. +++++++|+.+...
T Consensus 40 ~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~------~~~~~~~d~~~~~~--- 107 (263)
T 3pfg_A 40 LAALVRRHSPKAASLLDVACGTGMHLRHLADS---FGTVEGLELSADMLAIARRRNP------DAVLHHGDMRDFSL--- 107 (263)
T ss_dssp HHHHHHHHCTTCCEEEEETCTTSHHHHHHTTT---SSEEEEEESCHHHHHHHHHHCT------TSEEEECCTTTCCC---
T ss_pred HHHHHHhhCCCCCcEEEeCCcCCHHHHHHHHc---CCeEEEEECCHHHHHHHHhhCC------CCEEEECChHHCCc---
Confidence 33434333 34589999999999999999876 4699999999999999988743 68999999976421
Q ss_pred hhhcCCCceeEEEEcC-Cc------cchHHHHHHHHhcCCCCeEEEEecc
Q 025824 149 QDEKNHGSFDFIFVDA-DK------DNYLNYHKRLIELVKVGGVIGYDNT 191 (247)
Q Consensus 149 ~~~~~~~~fD~v~id~-~~------~~~~~~l~~~~~~L~~gG~lv~d~~ 191 (247)
.++||+|++.. .. .....+++.+.+.|+|||+++++..
T Consensus 108 -----~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 152 (263)
T 3pfg_A 108 -----GRRFSAVTCMFSSIGHLAGQAELDAALERFAAHVLPDGVVVVEPW 152 (263)
T ss_dssp -----SCCEEEEEECTTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEECCC
T ss_pred -----cCCcCEEEEcCchhhhcCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 47899999876 21 3455778999999999999999753
No 178
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.40 E-value=4e-13 Score=118.40 Aligned_cols=105 Identities=14% Similarity=0.111 Sum_probs=90.1
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCc-EEEEEecchhhhH-HHHhhhcCCCc
Q 025824 79 NAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHK-IDFREGPALPVLD-LLIQDEKNHGS 156 (247)
Q Consensus 79 ~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~-i~~~~gd~~~~l~-~l~~~~~~~~~ 156 (247)
+..+|||++||+|..++.+++..+...+|+++|++++.++.+++|++.+|+.++ ++++.+|+.+.+. .+ .++
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~------~~~ 125 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEW------GFG 125 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCC------SSC
T ss_pred CCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhh------CCC
Confidence 467999999999999999998764236899999999999999999999999777 9999999988776 53 468
Q ss_pred eeEEEEcCCccchHHHHHHHHhcCCCCeEEEEec
Q 025824 157 FDFIFVDADKDNYLNYHKRLIELVKVGGVIGYDN 190 (247)
Q Consensus 157 fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv~d~ 190 (247)
||+|++|.. .....+++.+.++|++||+|++.-
T Consensus 126 fD~V~lDP~-g~~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 126 FDYVDLDPF-GTPVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp EEEEEECCS-SCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred CcEEEECCC-cCHHHHHHHHHHHhCCCCEEEEEe
Confidence 999999983 344678899999999999998743
No 179
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.40 E-value=1.7e-12 Score=106.52 Aligned_cols=106 Identities=19% Similarity=0.219 Sum_probs=83.9
Q ss_pred HHHHHHhh-cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHH
Q 025824 70 FLNMLLKL-VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLI 148 (247)
Q Consensus 70 ~l~~l~~~-~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~ 148 (247)
+...+... .+..+|||+|||+|..+..+++. .+++++|+++.+++.|++++...+ .+++++++|+.+...
T Consensus 23 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~----~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~d~~~~~~--- 93 (243)
T 3d2l_A 23 WVAWVLEQVEPGKRIADIGCGTGTATLLLADH----YEVTGVDLSEEMLEIAQEKAMETN--RHVDFWVQDMRELEL--- 93 (243)
T ss_dssp HHHHHHHHSCTTCEEEEESCTTCHHHHHHTTT----SEEEEEESCHHHHHHHHHHHHHTT--CCCEEEECCGGGCCC---
T ss_pred HHHHHHHHcCCCCeEEEecCCCCHHHHHHhhC----CeEEEEECCHHHHHHHHHhhhhcC--CceEEEEcChhhcCC---
Confidence 33334333 34579999999999999988865 699999999999999999998766 468999999876421
Q ss_pred hhhcCCCceeEEEEcCC-------ccchHHHHHHHHhcCCCCeEEEEe
Q 025824 149 QDEKNHGSFDFIFVDAD-------KDNYLNYHKRLIELVKVGGVIGYD 189 (247)
Q Consensus 149 ~~~~~~~~fD~v~id~~-------~~~~~~~l~~~~~~L~~gG~lv~d 189 (247)
.++||+|++..+ .......++.+.++|+|||+++++
T Consensus 94 -----~~~fD~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 136 (243)
T 3d2l_A 94 -----PEPVDAITILCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFD 136 (243)
T ss_dssp -----SSCEEEEEECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred -----CCCcCEEEEeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 468999998652 234567889999999999999984
No 180
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.40 E-value=4e-13 Score=114.22 Aligned_cols=103 Identities=9% Similarity=0.070 Sum_probs=84.2
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCC--CcEEEEEecchhhhHHHHhhhcCCCc
Q 025824 79 NAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVA--HKIDFREGPALPVLDLLIQDEKNHGS 156 (247)
Q Consensus 79 ~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~--~~i~~~~gd~~~~l~~l~~~~~~~~~ 156 (247)
++.+|||||||+|..+..+++. +.+|+++|+++.+++.|++++...+.. .+++++++|+.+... .++
T Consensus 82 ~~~~vLDlGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~--------~~~ 150 (299)
T 3g2m_A 82 VSGPVLELAAGMGRLTFPFLDL---GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFAL--------DKR 150 (299)
T ss_dssp CCSCEEEETCTTTTTHHHHHTT---TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCC--------SCC
T ss_pred CCCcEEEEeccCCHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCc--------CCC
Confidence 3459999999999999999976 578999999999999999999877632 579999999976421 478
Q ss_pred eeEEEEcCC------ccchHHHHHHHHhcCCCCeEEEEeccc
Q 025824 157 FDFIFVDAD------KDNYLNYHKRLIELVKVGGVIGYDNTL 192 (247)
Q Consensus 157 fD~v~id~~------~~~~~~~l~~~~~~L~~gG~lv~d~~~ 192 (247)
||+|++... ......+++.+.+.|+|||++++....
T Consensus 151 fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 192 (299)
T 3g2m_A 151 FGTVVISSGSINELDEADRRGLYASVREHLEPGGKFLLSLAM 192 (299)
T ss_dssp EEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cCEEEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEeec
Confidence 999986422 223578899999999999999986543
No 181
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.40 E-value=5.8e-13 Score=110.29 Aligned_cols=99 Identities=11% Similarity=0.214 Sum_probs=82.1
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCce
Q 025824 78 VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSF 157 (247)
Q Consensus 78 ~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~f 157 (247)
.++.+|||+|||+|..+..+++..+ .+++++|+++.+++.|++++. ..+++++++|+.+. + + ..++|
T Consensus 43 ~~~~~vLD~GcG~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~----~~~~~~~~~d~~~~-~-~-----~~~~f 109 (253)
T 3g5l_A 43 FNQKTVLDLGCGFGWHCIYAAEHGA--KKVLGIDLSERMLTEAKRKTT----SPVVCYEQKAIEDI-A-I-----EPDAY 109 (253)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTC--SEEEEEESCHHHHHHHHHHCC----CTTEEEEECCGGGC-C-C-----CTTCE
T ss_pred cCCCEEEEECCCCCHHHHHHHHcCC--CEEEEEECCHHHHHHHHHhhc----cCCeEEEEcchhhC-C-C-----CCCCe
Confidence 3578999999999999999998732 399999999999999998765 35799999998654 2 1 25799
Q ss_pred eEEEEcCC---ccchHHHHHHHHhcCCCCeEEEEe
Q 025824 158 DFIFVDAD---KDNYLNYHKRLIELVKVGGVIGYD 189 (247)
Q Consensus 158 D~v~id~~---~~~~~~~l~~~~~~L~~gG~lv~d 189 (247)
|+|++... ..+....++.+.+.|+|||.+++.
T Consensus 110 D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 144 (253)
T 3g5l_A 110 NVVLSSLALHYIASFDDICKKVYINLKSSGSFIFS 144 (253)
T ss_dssp EEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEEchhhhhhhhHHHHHHHHHHHcCCCcEEEEE
Confidence 99998765 245678999999999999999985
No 182
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.39 E-value=5.8e-13 Score=109.58 Aligned_cols=97 Identities=13% Similarity=0.128 Sum_probs=79.4
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCce
Q 025824 78 VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSF 157 (247)
Q Consensus 78 ~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~f 157 (247)
.++.+|||||||+|..+..+++. +.+|+++|+++.+++.++++ ++++.+|+.+.+..+ ..++|
T Consensus 40 ~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~---------~~~~~~d~~~~~~~~-----~~~~f 102 (240)
T 3dli_A 40 KGCRRVLDIGCGRGEFLELCKEE---GIESIGVDINEDMIKFCEGK---------FNVVKSDAIEYLKSL-----PDKYL 102 (240)
T ss_dssp TTCSCEEEETCTTTHHHHHHHHH---TCCEEEECSCHHHHHHHHTT---------SEEECSCHHHHHHTS-----CTTCB
T ss_pred cCCCeEEEEeCCCCHHHHHHHhC---CCcEEEEECCHHHHHHHHhh---------cceeeccHHHHhhhc-----CCCCe
Confidence 45689999999999999999886 56899999999999888765 688889987765333 25799
Q ss_pred eEEEEcCC-----ccchHHHHHHHHhcCCCCeEEEEecc
Q 025824 158 DFIFVDAD-----KDNYLNYHKRLIELVKVGGVIGYDNT 191 (247)
Q Consensus 158 D~v~id~~-----~~~~~~~l~~~~~~L~~gG~lv~d~~ 191 (247)
|+|++... ......+++.+.+.|+|||++++...
T Consensus 103 D~i~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 141 (240)
T 3dli_A 103 DGVMISHFVEHLDPERLFELLSLCYSKMKYSSYIVIESP 141 (240)
T ss_dssp SEEEEESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEE
T ss_pred eEEEECCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEeC
Confidence 99998654 22557899999999999999998643
No 183
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.39 E-value=6.6e-13 Score=108.72 Aligned_cols=103 Identities=13% Similarity=0.120 Sum_probs=79.9
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCC-cchHHHH---HHHHHHcCCCCcEEEEEecchhhhHHHHhhhcC
Q 025824 78 VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDIN-RENYELG---LPVIQKAGVAHKIDFREGPALPVLDLLIQDEKN 153 (247)
Q Consensus 78 ~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~-~~~~~~a---~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~ 153 (247)
.++.+|||||||+|..+..+++..+ +.+|+++|++ +.+++.| ++++...++ .+++++++|+.+.....
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~~~-~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~-~~v~~~~~d~~~l~~~~------ 94 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAINDQ-NTFYIGIDPVKENLFDISKKIIKKPSKGGL-SNVVFVIAAAESLPFEL------ 94 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHTCT-TEEEEEECSCCGGGHHHHHHHTSCGGGTCC-SSEEEECCBTTBCCGGG------
T ss_pred CCCCEEEEEeccCcHHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHHHHHHcCC-CCeEEEEcCHHHhhhhc------
Confidence 3567999999999999999997655 7899999999 5555555 887777777 46999999997652211
Q ss_pred CCceeEEEEcCCcc--------chHHHHHHHHhcCCCCeEEEE
Q 025824 154 HGSFDFIFVDADKD--------NYLNYHKRLIELVKVGGVIGY 188 (247)
Q Consensus 154 ~~~fD~v~id~~~~--------~~~~~l~~~~~~L~~gG~lv~ 188 (247)
.+.+|.|++..... .....+..+.++|||||.+++
T Consensus 95 ~d~v~~i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i 137 (225)
T 3p2e_A 95 KNIADSISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEF 137 (225)
T ss_dssp TTCEEEEEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEE
T ss_pred cCeEEEEEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEE
Confidence 36788888765321 235678999999999999998
No 184
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.39 E-value=1.3e-12 Score=106.36 Aligned_cols=104 Identities=21% Similarity=0.271 Sum_probs=85.0
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCC----CcEEEEEecchhhhHHHHhhhcC
Q 025824 78 VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVA----HKIDFREGPALPVLDLLIQDEKN 153 (247)
Q Consensus 78 ~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~----~~i~~~~gd~~~~l~~l~~~~~~ 153 (247)
.+..+|||+|||+|..+..++.. +.+++++|+++.+++.+++++...++. .+++++.+|+.+.. + .
T Consensus 29 ~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~-----~ 98 (235)
T 3sm3_A 29 QEDDEILDIGCGSGKISLELASK---GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLS--F-----H 98 (235)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCC--S-----C
T ss_pred CCCCeEEEECCCCCHHHHHHHhC---CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccC--C-----C
Confidence 46789999999999999999986 579999999999999999998877763 46899999987542 1 2
Q ss_pred CCceeEEEEcCCc------cchHHHHHHHHhcCCCCeEEEEecc
Q 025824 154 HGSFDFIFVDADK------DNYLNYHKRLIELVKVGGVIGYDNT 191 (247)
Q Consensus 154 ~~~fD~v~id~~~------~~~~~~l~~~~~~L~~gG~lv~d~~ 191 (247)
.++||+|++.... .....+++.+.+.|+|||.+++.+.
T Consensus 99 ~~~~D~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 142 (235)
T 3sm3_A 99 DSSFDFAVMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEF 142 (235)
T ss_dssp TTCEEEEEEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCceeEEEEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEEC
Confidence 5789999987642 2223789999999999999998653
No 185
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.39 E-value=1e-11 Score=104.59 Aligned_cols=110 Identities=10% Similarity=0.039 Sum_probs=83.0
Q ss_pred CCCEEEEEcccc---cHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHH----hhh
Q 025824 79 NAKNTMEIGVYT---GYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLI----QDE 151 (247)
Q Consensus 79 ~~~~vLEiG~g~---G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~----~~~ 151 (247)
+..+|||||||+ |..+..+.+..| +++|+++|+++.+++.|++.+.. ..+++++.+|+.+.-..+. .+.
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p-~~~v~~vD~sp~~l~~Ar~~~~~---~~~v~~~~~D~~~~~~~~~~~~~~~~ 152 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNP-DARVVYVDIDPMVLTHGRALLAK---DPNTAVFTADVRDPEYILNHPDVRRM 152 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCT-TCEEEEEESSHHHHHHHHHHHTT---CTTEEEEECCTTCHHHHHHSHHHHHH
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCC-CCEEEEEECChHHHHHHHHhcCC---CCCeEEEEeeCCCchhhhccchhhcc
Confidence 457999999999 988766666665 78999999999999999998843 3579999999975321100 000
Q ss_pred cCCCceeEEEEcCC-----ccchHHHHHHHHhcCCCCeEEEEeccc
Q 025824 152 KNHGSFDFIFVDAD-----KDNYLNYHKRLIELVKVGGVIGYDNTL 192 (247)
Q Consensus 152 ~~~~~fD~v~id~~-----~~~~~~~l~~~~~~L~~gG~lv~d~~~ 192 (247)
....+||+|++... .......++.+.+.|+|||+|++.+..
T Consensus 153 ~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~ 198 (274)
T 2qe6_A 153 IDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLV 198 (274)
T ss_dssp CCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEB
T ss_pred CCCCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEec
Confidence 01258999987653 123678999999999999999998754
No 186
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.39 E-value=2.1e-12 Score=111.96 Aligned_cols=99 Identities=22% Similarity=0.156 Sum_probs=85.6
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCce
Q 025824 78 VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSF 157 (247)
Q Consensus 78 ~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~f 157 (247)
.+..+|||+|||+|..++. ++ + ..+|+++|+++.+++.|++|++.+++.++++++++|+.+.+ ++|
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~--~-~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~----------~~f 259 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CK--N-AKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD----------VKG 259 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TT--T-SSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC----------CCE
T ss_pred CCCCEEEEccCccCHHHHh-cc--C-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc----------CCC
Confidence 4678999999999999999 76 3 68999999999999999999999998778999999998763 579
Q ss_pred eEEEEcCCccchHHHHHHHHhcCCCCeEEEEecc
Q 025824 158 DFIFVDADKDNYLNYHKRLIELVKVGGVIGYDNT 191 (247)
Q Consensus 158 D~v~id~~~~~~~~~l~~~~~~L~~gG~lv~d~~ 191 (247)
|+|++|.+.. ...+++.+.++|+|||++++...
T Consensus 260 D~Vi~dpP~~-~~~~l~~~~~~L~~gG~l~~~~~ 292 (336)
T 2yx1_A 260 NRVIMNLPKF-AHKFIDKALDIVEEGGVIHYYTI 292 (336)
T ss_dssp EEEEECCTTT-GGGGHHHHHHHEEEEEEEEEEEE
T ss_pred cEEEECCcHh-HHHHHHHHHHHcCCCCEEEEEEe
Confidence 9999997633 34788889999999999987544
No 187
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.38 E-value=1.1e-12 Score=110.33 Aligned_cols=100 Identities=17% Similarity=0.137 Sum_probs=82.3
Q ss_pred HHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcC
Q 025824 74 LLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKN 153 (247)
Q Consensus 74 l~~~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~ 153 (247)
.+...++.+|||||||+|..+..++. + +++|+++|+++.+++.+++.+ .+++++++|+.+. + +
T Consensus 52 ~l~~~~~~~vLDiGcG~G~~~~~l~~--~-~~~v~gvD~s~~~~~~a~~~~------~~~~~~~~d~~~~-~-~------ 114 (279)
T 3ccf_A 52 LLNPQPGEFILDLGCGTGQLTEKIAQ--S-GAEVLGTDNAATMIEKARQNY------PHLHFDVADARNF-R-V------ 114 (279)
T ss_dssp HHCCCTTCEEEEETCTTSHHHHHHHH--T-TCEEEEEESCHHHHHHHHHHC------TTSCEEECCTTTC-C-C------
T ss_pred HhCCCCCCEEEEecCCCCHHHHHHHh--C-CCeEEEEECCHHHHHHHHhhC------CCCEEEECChhhC-C-c------
Confidence 34445678999999999999999998 3 789999999999999998765 4688999998763 2 1
Q ss_pred CCceeEEEEcCCc---cchHHHHHHHHhcCCCCeEEEEec
Q 025824 154 HGSFDFIFVDADK---DNYLNYHKRLIELVKVGGVIGYDN 190 (247)
Q Consensus 154 ~~~fD~v~id~~~---~~~~~~l~~~~~~L~~gG~lv~d~ 190 (247)
.++||+|++.... .+....++.+.+.|+|||.+++..
T Consensus 115 ~~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~~ 154 (279)
T 3ccf_A 115 DKPLDAVFSNAMLHWVKEPEAAIASIHQALKSGGRFVAEF 154 (279)
T ss_dssp SSCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCcCEEEEcchhhhCcCHHHHHHHHHHhcCCCcEEEEEe
Confidence 4689999987652 456788999999999999999853
No 188
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.38 E-value=2.3e-12 Score=100.77 Aligned_cols=103 Identities=15% Similarity=0.164 Sum_probs=79.8
Q ss_pred CHHHHHHHHHHHhh--cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecch
Q 025824 64 SADEGQFLNMLLKL--VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPAL 141 (247)
Q Consensus 64 ~~~~~~~l~~l~~~--~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~ 141 (247)
.++...++.. +.. .++.+|||+|||+|..+..+++. . +|+++|+++.+++. .++++++++|+.
T Consensus 7 ~~~~~~l~~~-l~~~~~~~~~vLD~GcG~G~~~~~l~~~---~-~v~gvD~s~~~~~~----------~~~~~~~~~d~~ 71 (170)
T 3q87_B 7 GEDTYTLMDA-LEREGLEMKIVLDLGTSTGVITEQLRKR---N-TVVSTDLNIRALES----------HRGGNLVRADLL 71 (170)
T ss_dssp CHHHHHHHHH-HHHHTCCSCEEEEETCTTCHHHHHHTTT---S-EEEEEESCHHHHHT----------CSSSCEEECSTT
T ss_pred CccHHHHHHH-HHhhcCCCCeEEEeccCccHHHHHHHhc---C-cEEEEECCHHHHhc----------ccCCeEEECChh
Confidence 4666666666 444 56789999999999999999875 3 99999999998876 357899999997
Q ss_pred hhhHHHHhhhcCCCceeEEEEcCCcc------------chHHHHHHHHhcCCCCeEEEEec
Q 025824 142 PVLDLLIQDEKNHGSFDFIFVDADKD------------NYLNYHKRLIELVKVGGVIGYDN 190 (247)
Q Consensus 142 ~~l~~l~~~~~~~~~fD~v~id~~~~------------~~~~~l~~~~~~L~~gG~lv~d~ 190 (247)
+.++ .++||+|+++.+.. .....+..+.+.+ |||.+++-.
T Consensus 72 ~~~~--------~~~fD~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~ 123 (170)
T 3q87_B 72 CSIN--------QESVDVVVFNPPYVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLV 123 (170)
T ss_dssp TTBC--------GGGCSEEEECCCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEE
T ss_pred hhcc--------cCCCCEEEECCCCccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEE
Confidence 7432 37899999976532 2356778888878 999998743
No 189
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.38 E-value=2.1e-12 Score=113.20 Aligned_cols=104 Identities=17% Similarity=0.226 Sum_probs=83.8
Q ss_pred hcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCc
Q 025824 77 LVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGS 156 (247)
Q Consensus 77 ~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~ 156 (247)
..+.++|||||||+|..++..|++- ..+|++||.++ +++.|+++++.+|+.++|+++++++.+.- + .++
T Consensus 81 ~~~~k~VLDvG~GtGiLs~~Aa~aG--A~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~--l------pe~ 149 (376)
T 4hc4_A 81 ALRGKTVLDVGAGTGILSIFCAQAG--ARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVE--L------PEQ 149 (376)
T ss_dssp HHTTCEEEEETCTTSHHHHHHHHTT--CSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCC--C------SSC
T ss_pred hcCCCEEEEeCCCccHHHHHHHHhC--CCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeec--C------Ccc
Confidence 4578899999999999998877752 35899999986 89999999999999999999999997652 2 478
Q ss_pred eeEEEEcCC------ccchHHHHHHHHhcCCCCeEEEEecc
Q 025824 157 FDFIFVDAD------KDNYLNYHKRLIELVKVGGVIGYDNT 191 (247)
Q Consensus 157 fD~v~id~~------~~~~~~~l~~~~~~L~~gG~lv~d~~ 191 (247)
||+|+.... ......++....++|+|||+++.+-.
T Consensus 150 ~DvivsE~~~~~l~~e~~l~~~l~a~~r~Lkp~G~~iP~~a 190 (376)
T 4hc4_A 150 VDAIVSEWMGYGLLHESMLSSVLHARTKWLKEGGLLLPASA 190 (376)
T ss_dssp EEEEECCCCBTTBTTTCSHHHHHHHHHHHEEEEEEEESCEE
T ss_pred ccEEEeecccccccccchhhhHHHHHHhhCCCCceECCccc
Confidence 999986322 23456667777799999999986544
No 190
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.38 E-value=1.7e-12 Score=105.12 Aligned_cols=103 Identities=13% Similarity=0.080 Sum_probs=77.8
Q ss_pred hcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHH----HHHHcCCCCcEEEEEecchhhhHHHHhhhc
Q 025824 77 LVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLP----VIQKAGVAHKIDFREGPALPVLDLLIQDEK 152 (247)
Q Consensus 77 ~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~----~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~ 152 (247)
..+..+|||+|||+|..+..+++..| +++|+++|+++++++.+.+ +....++ ++++++++|+.+. +.
T Consensus 25 ~~~~~~vLDiGcG~G~~~~~la~~~p-~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~-~~v~~~~~d~~~l-~~------ 95 (218)
T 3mq2_A 25 SQYDDVVLDVGTGDGKHPYKVARQNP-SRLVVALDADKSRMEKISAKAAAKPAKGGL-PNLLYLWATAERL-PP------ 95 (218)
T ss_dssp TTSSEEEEEESCTTCHHHHHHHHHCT-TEEEEEEESCGGGGHHHHHHHTSCGGGTCC-TTEEEEECCSTTC-CS------
T ss_pred ccCCCEEEEecCCCCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHhhhhcCC-CceEEEecchhhC-CC------
Confidence 45678999999999999999999876 7899999999998875333 3333454 4799999999763 32
Q ss_pred CCCceeEEEEcCCc--------cchHHHHHHHHhcCCCCeEEEEe
Q 025824 153 NHGSFDFIFVDADK--------DNYLNYHKRLIELVKVGGVIGYD 189 (247)
Q Consensus 153 ~~~~fD~v~id~~~--------~~~~~~l~~~~~~L~~gG~lv~d 189 (247)
..+. |.|++.... .+...+++.+.+.|||||.+++.
T Consensus 96 ~~~~-d~v~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 139 (218)
T 3mq2_A 96 LSGV-GELHVLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVA 139 (218)
T ss_dssp CCCE-EEEEEESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEE
T ss_pred CCCC-CEEEEEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEE
Confidence 1344 777754431 12267889999999999999984
No 191
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.38 E-value=5.3e-12 Score=110.11 Aligned_cols=106 Identities=12% Similarity=0.054 Sum_probs=88.4
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCce
Q 025824 78 VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSF 157 (247)
Q Consensus 78 ~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~f 157 (247)
.+..+|||||||+|..+..+++..| +.+++++|+ +.+++.|++++...++.++++++.+|+.+. + ...+
T Consensus 189 ~~~~~vLDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~--------~~~~ 257 (359)
T 1x19_A 189 DGVKKMIDVGGGIGDISAAMLKHFP-ELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKE-S--------YPEA 257 (359)
T ss_dssp TTCCEEEEESCTTCHHHHHHHHHCT-TCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTS-C--------CCCC
T ss_pred CCCCEEEEECCcccHHHHHHHHHCC-CCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccC-C--------CCCC
Confidence 4567999999999999999999987 789999999 999999999999988888899999999764 2 1334
Q ss_pred eEEEEcCCc-----cchHHHHHHHHhcCCCCeEEEEeccccc
Q 025824 158 DFIFVDADK-----DNYLNYHKRLIELVKVGGVIGYDNTLWN 194 (247)
Q Consensus 158 D~v~id~~~-----~~~~~~l~~~~~~L~~gG~lv~d~~~~~ 194 (247)
|+|++.... .....+++.+.+.|+|||.+++.+...+
T Consensus 258 D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 299 (359)
T 1x19_A 258 DAVLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILDMVID 299 (359)
T ss_dssp SEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEECCC
T ss_pred CEEEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEecccC
Confidence 999986542 2256789999999999999977665543
No 192
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.38 E-value=2.9e-12 Score=111.71 Aligned_cols=104 Identities=17% Similarity=0.217 Sum_probs=87.6
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCce
Q 025824 78 VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSF 157 (247)
Q Consensus 78 ~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~f 157 (247)
.+..+|||||||+|..+..+++..+ +.+++++|+ +.+++.|++++...++.++++++.+|+.+.++ ..|
T Consensus 182 ~~~~~vLDvG~G~G~~~~~l~~~~~-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~---------~~~ 250 (360)
T 1tw3_A 182 TNVRHVLDVGGGKGGFAAAIARRAP-HVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFEPLP---------RKA 250 (360)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTSCCS---------SCE
T ss_pred ccCcEEEEeCCcCcHHHHHHHHhCC-CCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCCCC---------CCc
Confidence 4567999999999999999999886 789999999 99999999999999887799999999876432 359
Q ss_pred eEEEEcCCc-----cchHHHHHHHHhcCCCCeEEEEeccc
Q 025824 158 DFIFVDADK-----DNYLNYHKRLIELVKVGGVIGYDNTL 192 (247)
Q Consensus 158 D~v~id~~~-----~~~~~~l~~~~~~L~~gG~lv~d~~~ 192 (247)
|+|++.... .....+++.+.+.|+|||.+++.+..
T Consensus 251 D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 251 DAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred cEEEEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 999986542 22257899999999999998876655
No 193
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.38 E-value=1.7e-12 Score=114.06 Aligned_cols=102 Identities=16% Similarity=0.111 Sum_probs=84.1
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCcee
Q 025824 79 NAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFD 158 (247)
Q Consensus 79 ~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~fD 158 (247)
++++|||+| |+|..++.++...+ .++|+++|+++++++.|+++++..|+. +++++++|+.+.++.. ..++||
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~-~~~v~~vDi~~~~l~~a~~~~~~~g~~-~v~~~~~D~~~~l~~~-----~~~~fD 243 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGL-PKRIAVLDIDERLTKFIEKAANEIGYE-DIEIFTFDLRKPLPDY-----ALHKFD 243 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTC-CSEEEEECSCHHHHHHHHHHHHHHTCC-CEEEECCCTTSCCCTT-----TSSCBS
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCC-CEEEEEChhhhhchhh-----ccCCcc
Confidence 468999999 99999999987644 579999999999999999999999986 8999999998744421 136899
Q ss_pred EEEEcCCc--cchHHHHHHHHhcCCCCe-EEEE
Q 025824 159 FIFVDADK--DNYLNYHKRLIELVKVGG-VIGY 188 (247)
Q Consensus 159 ~v~id~~~--~~~~~~l~~~~~~L~~gG-~lv~ 188 (247)
+|++|.+. .....+++.+.+.|+||| ++++
T Consensus 244 ~Vi~~~p~~~~~~~~~l~~~~~~LkpgG~~~~~ 276 (373)
T 2qm3_A 244 TFITDPPETLEAIRAFVGRGIATLKGPRCAGYF 276 (373)
T ss_dssp EEEECCCSSHHHHHHHHHHHHHTBCSTTCEEEE
T ss_pred EEEECCCCchHHHHHHHHHHHHHcccCCeEEEE
Confidence 99999763 234678889999999999 4344
No 194
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.38 E-value=1.1e-12 Score=105.60 Aligned_cols=103 Identities=19% Similarity=0.124 Sum_probs=82.1
Q ss_pred HHHHHHh-hcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHH
Q 025824 70 FLNMLLK-LVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLI 148 (247)
Q Consensus 70 ~l~~l~~-~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~ 148 (247)
.+..++. ..++.+|||+|||+|..+..+++. +.+++++|+++.+++.+++++ +++++.+|+.+.. .
T Consensus 33 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~-------~~~~~~~d~~~~~--~- 99 (211)
T 3e23_A 33 TLTKFLGELPAGAKILELGCGAGYQAEAMLAA---GFDVDATDGSPELAAEASRRL-------GRPVRTMLFHQLD--A- 99 (211)
T ss_dssp HHHHHHTTSCTTCEEEESSCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHH-------TSCCEECCGGGCC--C-
T ss_pred HHHHHHHhcCCCCcEEEECCCCCHHHHHHHHc---CCeEEEECCCHHHHHHHHHhc-------CCceEEeeeccCC--C-
Confidence 3444443 345679999999999999999976 569999999999999999887 3567888886543 1
Q ss_pred hhhcCCCceeEEEEcCCc-----cchHHHHHHHHhcCCCCeEEEEec
Q 025824 149 QDEKNHGSFDFIFVDADK-----DNYLNYHKRLIELVKVGGVIGYDN 190 (247)
Q Consensus 149 ~~~~~~~~fD~v~id~~~-----~~~~~~l~~~~~~L~~gG~lv~d~ 190 (247)
.++||+|++.... .....+++.+.+.|+|||++++..
T Consensus 100 -----~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 141 (211)
T 3e23_A 100 -----IDAYDAVWAHACLLHVPRDELADVLKLIWRALKPGGLFYASY 141 (211)
T ss_dssp -----CSCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred -----CCcEEEEEecCchhhcCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 6899999987652 255678999999999999999864
No 195
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.37 E-value=2.7e-12 Score=103.87 Aligned_cols=105 Identities=11% Similarity=0.138 Sum_probs=81.9
Q ss_pred HHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcC
Q 025824 74 LLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKN 153 (247)
Q Consensus 74 l~~~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~ 153 (247)
.....++.+|||+|||+|..+..+++. +.+++++|+++.+++.++++ .++++..++..+....... .
T Consensus 47 ~~~~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~~~~~---~ 113 (227)
T 3e8s_A 47 AILGRQPERVLDLGCGEGWLLRALADR---GIEAVGVDGDRTLVDAARAA-------GAGEVHLASYAQLAEAKVP---V 113 (227)
T ss_dssp HHHHTCCSEEEEETCTTCHHHHHHHTT---TCEEEEEESCHHHHHHHHHT-------CSSCEEECCHHHHHTTCSC---C
T ss_pred HhhcCCCCEEEEeCCCCCHHHHHHHHC---CCEEEEEcCCHHHHHHHHHh-------cccccchhhHHhhcccccc---c
Confidence 334456799999999999999999876 56999999999999999876 3567888887654211000 1
Q ss_pred CCceeEEEEcCC--ccchHHHHHHHHhcCCCCeEEEEecc
Q 025824 154 HGSFDFIFVDAD--KDNYLNYHKRLIELVKVGGVIGYDNT 191 (247)
Q Consensus 154 ~~~fD~v~id~~--~~~~~~~l~~~~~~L~~gG~lv~d~~ 191 (247)
.++||+|++... ..+...+++.+.+.|+|||++++...
T Consensus 114 ~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~~ 153 (227)
T 3e8s_A 114 GKDYDLICANFALLHQDIIELLSAMRTLLVPGGALVIQTL 153 (227)
T ss_dssp CCCEEEEEEESCCCSSCCHHHHHHHHHTEEEEEEEEEEEC
T ss_pred CCCccEEEECchhhhhhHHHHHHHHHHHhCCCeEEEEEec
Confidence 356999998654 45677899999999999999998654
No 196
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.37 E-value=1.9e-12 Score=113.38 Aligned_cols=103 Identities=17% Similarity=0.216 Sum_probs=87.0
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCce
Q 025824 78 VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSF 157 (247)
Q Consensus 78 ~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~f 157 (247)
.+..+|||||||+|..+..+++..| +.+++++|+ +.+++.|++++...++.++++++.+|+.+.++ ..|
T Consensus 181 ~~~~~vlDvG~G~G~~~~~l~~~~~-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~---------~~~ 249 (374)
T 1qzz_A 181 SAVRHVLDVGGGNGGMLAAIALRAP-HLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFKPLP---------VTA 249 (374)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSCCS---------CCE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCC-CCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCcCC---------CCC
Confidence 4568999999999999999999886 789999999 99999999999999987799999999876432 349
Q ss_pred eEEEEcCCc-----cchHHHHHHHHhcCCCCeEEEEecc
Q 025824 158 DFIFVDADK-----DNYLNYHKRLIELVKVGGVIGYDNT 191 (247)
Q Consensus 158 D~v~id~~~-----~~~~~~l~~~~~~L~~gG~lv~d~~ 191 (247)
|+|++.... .....+++.+.+.|+|||.+++.+.
T Consensus 250 D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 250 DVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CEEEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 999986542 2224789999999999998887655
No 197
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.37 E-value=4.4e-12 Score=109.26 Aligned_cols=106 Identities=17% Similarity=0.228 Sum_probs=88.4
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCce
Q 025824 78 VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSF 157 (247)
Q Consensus 78 ~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~f 157 (247)
.+..+|||+|||+|..+..+++..| +.+++++|++ .+++.|++++...++.++++++.+|..+. + + .+.|
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~-~------~~~~ 233 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNP-NAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEV-D-Y------GNDY 233 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCT-TCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTS-C-C------CSCE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCC-CCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccC-C-C------CCCC
Confidence 4668999999999999999999986 7899999999 99999999999988878899999998763 1 1 2459
Q ss_pred eEEEEcCCc-----cchHHHHHHHHhcCCCCeEEEEecccc
Q 025824 158 DFIFVDADK-----DNYLNYHKRLIELVKVGGVIGYDNTLW 193 (247)
Q Consensus 158 D~v~id~~~-----~~~~~~l~~~~~~L~~gG~lv~d~~~~ 193 (247)
|+|++.... ......++.+.+.|+|||.+++.+...
T Consensus 234 D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~ 274 (335)
T 2r3s_A 234 DLVLLPNFLHHFDVATCEQLLRKIKTALAVEGKVIVFDFIP 274 (335)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCC
T ss_pred cEEEEcchhccCCHHHHHHHHHHHHHhCCCCcEEEEEeecC
Confidence 999985442 334688899999999999888766554
No 198
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.36 E-value=2.2e-12 Score=111.27 Aligned_cols=103 Identities=12% Similarity=0.070 Sum_probs=87.5
Q ss_pred CEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCceeEE
Q 025824 81 KNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDFI 160 (247)
Q Consensus 81 ~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~fD~v 160 (247)
.+|||+|||+|..+..+++..| +.+++++|+ +.+++.|++++...++.++++++.+|..+.+ .++||+|
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---------~~~~D~v 237 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEP-SARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQEV---------PSNGDIY 237 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCT-TCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTTCC---------CSSCSEE
T ss_pred CEEEEeCCCchHHHHHHHHHCC-CCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCCCC---------CCCCCEE
Confidence 8999999999999999999986 789999999 9999999999988877788999999987632 3579999
Q ss_pred EEcCCc-----cchHHHHHHHHhcCCCCeEEEEeccccc
Q 025824 161 FVDADK-----DNYLNYHKRLIELVKVGGVIGYDNTLWN 194 (247)
Q Consensus 161 ~id~~~-----~~~~~~l~~~~~~L~~gG~lv~d~~~~~ 194 (247)
++.... ......++.+.+.|+|||.+++.+...+
T Consensus 238 ~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 276 (334)
T 2ip2_A 238 LLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIERTIS 276 (334)
T ss_dssp EEESCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEECCBC
T ss_pred EEchhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccC
Confidence 986542 2334788999999999999998776654
No 199
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.36 E-value=8.4e-12 Score=103.03 Aligned_cols=102 Identities=11% Similarity=0.120 Sum_probs=83.0
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCce
Q 025824 78 VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSF 157 (247)
Q Consensus 78 ~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~f 157 (247)
.++.+|||||||+|..+..++... ..+++++|+++.+++.+++++... .+++++++|+.+. + + ..++|
T Consensus 92 ~~~~~vLDiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~-~-~-----~~~~f 159 (254)
T 1xtp_A 92 HGTSRALDCGAGIGRITKNLLTKL--YATTDLLEPVKHMLEEAKRELAGM---PVGKFILASMETA-T-L-----PPNTY 159 (254)
T ss_dssp CCCSEEEEETCTTTHHHHHTHHHH--CSEEEEEESCHHHHHHHHHHTTTS---SEEEEEESCGGGC-C-C-----CSSCE
T ss_pred cCCCEEEEECCCcCHHHHHHHHhh--cCEEEEEeCCHHHHHHHHHHhccC---CceEEEEccHHHC-C-C-----CCCCe
Confidence 356799999999999999988764 468999999999999999987654 5799999998764 2 1 25789
Q ss_pred eEEEEcCCc-----cchHHHHHHHHhcCCCCeEEEEecc
Q 025824 158 DFIFVDADK-----DNYLNYHKRLIELVKVGGVIGYDNT 191 (247)
Q Consensus 158 D~v~id~~~-----~~~~~~l~~~~~~L~~gG~lv~d~~ 191 (247)
|+|++.... .....+++.+.+.|+|||++++.+.
T Consensus 160 D~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 198 (254)
T 1xtp_A 160 DLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKEN 198 (254)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEec
Confidence 999987652 3356788999999999999998664
No 200
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.36 E-value=1.6e-12 Score=106.62 Aligned_cols=108 Identities=13% Similarity=0.192 Sum_probs=84.8
Q ss_pred HHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHh
Q 025824 70 FLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQ 149 (247)
Q Consensus 70 ~l~~l~~~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~ 149 (247)
.+..++...++.+|||+|||+|..+..+++. + ..+++++|+++.+++.+++++.. .+++++++|+.+.. +
T Consensus 34 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~-~~~v~~vD~s~~~~~~a~~~~~~----~~~~~~~~d~~~~~--~-- 103 (243)
T 3bkw_A 34 ALRAMLPEVGGLRIVDLGCGFGWFCRWAHEH-G-ASYVLGLDLSEKMLARARAAGPD----TGITYERADLDKLH--L-- 103 (243)
T ss_dssp HHHHHSCCCTTCEEEEETCTTCHHHHHHHHT-T-CSEEEEEESCHHHHHHHHHTSCS----SSEEEEECCGGGCC--C--
T ss_pred HHHHhccccCCCEEEEEcCcCCHHHHHHHHC-C-CCeEEEEcCCHHHHHHHHHhccc----CCceEEEcChhhcc--C--
Confidence 3444444456789999999999999999876 2 23999999999999999886543 36999999987642 1
Q ss_pred hhcCCCceeEEEEcCC---ccchHHHHHHHHhcCCCCeEEEEec
Q 025824 150 DEKNHGSFDFIFVDAD---KDNYLNYHKRLIELVKVGGVIGYDN 190 (247)
Q Consensus 150 ~~~~~~~fD~v~id~~---~~~~~~~l~~~~~~L~~gG~lv~d~ 190 (247)
..++||+|++... ..+....++.+.+.|+|||.+++..
T Consensus 104 ---~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~ 144 (243)
T 3bkw_A 104 ---PQDSFDLAYSSLALHYVEDVARLFRTVHQALSPGGHFVFST 144 (243)
T ss_dssp ---CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ---CCCCceEEEEeccccccchHHHHHHHHHHhcCcCcEEEEEe
Confidence 2578999998755 2356788999999999999999854
No 201
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.35 E-value=6.3e-12 Score=103.48 Aligned_cols=105 Identities=11% Similarity=0.074 Sum_probs=80.6
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCce
Q 025824 78 VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSF 157 (247)
Q Consensus 78 ~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~f 157 (247)
.+..+|||+|||+|..+..++...+ +|+++|+++.+++.+++++. ..+++++++|+.+......-. ...+|
T Consensus 55 ~~~~~vLD~GcG~G~~~~~la~~~~---~v~gvD~s~~~~~~a~~~~~----~~~~~~~~~d~~~~~~~~~~~--~~~~~ 125 (245)
T 3ggd_A 55 NPELPLIDFACGNGTQTKFLSQFFP---RVIGLDVSKSALEIAAKENT----AANISYRLLDGLVPEQAAQIH--SEIGD 125 (245)
T ss_dssp CTTSCEEEETCTTSHHHHHHHHHSS---CEEEEESCHHHHHHHHHHSC----CTTEEEEECCTTCHHHHHHHH--HHHCS
T ss_pred CCCCeEEEEcCCCCHHHHHHHHhCC---CEEEEECCHHHHHHHHHhCc----ccCceEEECcccccccccccc--cccCc
Confidence 4557899999999999999998754 89999999999999998762 247999999997643211000 01359
Q ss_pred eEEEEcCC-----ccchHHHHHHHHhcCCCCeEEEEecc
Q 025824 158 DFIFVDAD-----KDNYLNYHKRLIELVKVGGVIGYDNT 191 (247)
Q Consensus 158 D~v~id~~-----~~~~~~~l~~~~~~L~~gG~lv~d~~ 191 (247)
|+|++... ......+++.+.+.|+|||++++-+.
T Consensus 126 d~v~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 164 (245)
T 3ggd_A 126 ANIYMRTGFHHIPVEKRELLGQSLRILLGKQGAMYLIEL 164 (245)
T ss_dssp CEEEEESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred cEEEEcchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 99998754 23567899999999999998776544
No 202
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.35 E-value=1.7e-12 Score=112.79 Aligned_cols=100 Identities=16% Similarity=0.224 Sum_probs=83.6
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCce
Q 025824 78 VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSF 157 (247)
Q Consensus 78 ~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~f 157 (247)
..+.+|||+|||+|..+..+++..+ ..+|+++|+++.+++.+++++...++. ++++.+|..+.. .++|
T Consensus 195 ~~~~~VLDlGcG~G~~~~~la~~~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~--~~~~~~d~~~~~---------~~~f 262 (343)
T 2pjd_A 195 HTKGKVLDVGCGAGVLSVAFARHSP-KIRLTLCDVSAPAVEASRATLAANGVE--GEVFASNVFSEV---------KGRF 262 (343)
T ss_dssp TCCSBCCBTTCTTSHHHHHHHHHCT-TCBCEEEESBHHHHHHHHHHHHHTTCC--CEEEECSTTTTC---------CSCE
T ss_pred CCCCeEEEecCccCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHhCCC--CEEEEccccccc---------cCCe
Confidence 3567999999999999999998875 679999999999999999999988774 677888886542 4689
Q ss_pred eEEEEcCCc--------cchHHHHHHHHhcCCCCeEEEEe
Q 025824 158 DFIFVDADK--------DNYLNYHKRLIELVKVGGVIGYD 189 (247)
Q Consensus 158 D~v~id~~~--------~~~~~~l~~~~~~L~~gG~lv~d 189 (247)
|+|+++... .....+++.+.+.|+|||.+++-
T Consensus 263 D~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 302 (343)
T 2pjd_A 263 DMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIV 302 (343)
T ss_dssp EEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred eEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEE
Confidence 999997652 22467889999999999999873
No 203
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.34 E-value=3.9e-12 Score=115.18 Aligned_cols=100 Identities=17% Similarity=0.171 Sum_probs=83.3
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCce
Q 025824 78 VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSF 157 (247)
Q Consensus 78 ~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~f 157 (247)
.++.+|||||||+|..++.+++. + ..+|+++|+++ +++.|+++++..|+.++++++.+|+.+.. + .++|
T Consensus 157 ~~~~~VLDiGcGtG~la~~la~~-~-~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~--~------~~~f 225 (480)
T 3b3j_A 157 FKDKIVLDVGCGSGILSFFAAQA-G-ARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVS--L------PEQV 225 (480)
T ss_dssp TTTCEEEEESCSTTHHHHHHHHT-T-CSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCC--C------SSCE
T ss_pred cCCCEEEEecCcccHHHHHHHHc-C-CCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhCc--c------CCCe
Confidence 35689999999999999988874 3 57999999998 99999999999999889999999997641 1 3689
Q ss_pred eEEEEcCC-----ccchHHHHHHHHhcCCCCeEEEE
Q 025824 158 DFIFVDAD-----KDNYLNYHKRLIELVKVGGVIGY 188 (247)
Q Consensus 158 D~v~id~~-----~~~~~~~l~~~~~~L~~gG~lv~ 188 (247)
|+|+.+.. .+.....+..+.+.|+|||++++
T Consensus 226 D~Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 226 DIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp EEEECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEES
T ss_pred EEEEEeCchHhcCcHHHHHHHHHHHHhcCCCCEEEE
Confidence 99998754 23455667777899999999984
No 204
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.34 E-value=1e-11 Score=110.85 Aligned_cols=115 Identities=18% Similarity=0.168 Sum_probs=89.0
Q ss_pred ccccCHHHHHHH-HHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEe
Q 025824 60 IMTTSADEGQFL-NMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREG 138 (247)
Q Consensus 60 ~~~~~~~~~~~l-~~l~~~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~g 138 (247)
+.+.++...+.+ ..+....+..+|||+|||+|..++.+++. ..+|+++|+++++++.|++++..+++. ++++.+
T Consensus 270 F~q~n~~~~e~l~~~~~~~~~~~~VLDlgcG~G~~sl~la~~---~~~V~gvD~s~~ai~~A~~n~~~ngl~--v~~~~~ 344 (425)
T 2jjq_A 270 FFQTNSYQAVNLVRKVSELVEGEKILDMYSGVGTFGIYLAKR---GFNVKGFDSNEFAIEMARRNVEINNVD--AEFEVA 344 (425)
T ss_dssp CCCSBHHHHHHHHHHHHHHCCSSEEEEETCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHTCC--EEEEEC
T ss_pred ccccCHHHHHHHHHHhhccCCCCEEEEeeccchHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCc--EEEEEC
Confidence 344445554443 44444556789999999999999999975 469999999999999999999998884 999999
Q ss_pred cchhhhHHHHhhhcCCCceeEEEEcCCccchHH-HHHHHHhcCCCCeEEEEe
Q 025824 139 PALPVLDLLIQDEKNHGSFDFIFVDADKDNYLN-YHKRLIELVKVGGVIGYD 189 (247)
Q Consensus 139 d~~~~l~~l~~~~~~~~~fD~v~id~~~~~~~~-~l~~~~~~L~~gG~lv~d 189 (247)
|+.+.++ .+||+|++|.+...... .++.+ ..|+|+|++++.
T Consensus 345 d~~~~~~---------~~fD~Vv~dPPr~g~~~~~~~~l-~~l~p~givyvs 386 (425)
T 2jjq_A 345 SDREVSV---------KGFDTVIVDPPRAGLHPRLVKRL-NREKPGVIVYVS 386 (425)
T ss_dssp CTTTCCC---------TTCSEEEECCCTTCSCHHHHHHH-HHHCCSEEEEEE
T ss_pred ChHHcCc---------cCCCEEEEcCCccchHHHHHHHH-HhcCCCcEEEEE
Confidence 9987642 37999999988544443 45544 458999999874
No 205
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.34 E-value=2.3e-12 Score=100.13 Aligned_cols=100 Identities=14% Similarity=0.060 Sum_probs=81.2
Q ss_pred hhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCC
Q 025824 76 KLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHG 155 (247)
Q Consensus 76 ~~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~ 155 (247)
...+..+|||+|||+|..+..+++.. .+++++|+++.+++.++++ .++++++.+| . +. ..+
T Consensus 14 ~~~~~~~vLDiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~------~~~v~~~~~d-~---~~------~~~ 74 (170)
T 3i9f_A 14 FEGKKGVIVDYGCGNGFYCKYLLEFA---TKLYCIDINVIALKEVKEK------FDSVITLSDP-K---EI------PDN 74 (170)
T ss_dssp HSSCCEEEEEETCTTCTTHHHHHTTE---EEEEEECSCHHHHHHHHHH------CTTSEEESSG-G---GS------CTT
T ss_pred CcCCCCeEEEECCCCCHHHHHHHhhc---CeEEEEeCCHHHHHHHHHh------CCCcEEEeCC-C---CC------CCC
Confidence 44566799999999999999999864 3999999999999999887 2478999988 2 21 257
Q ss_pred ceeEEEEcCC---ccchHHHHHHHHhcCCCCeEEEEeccccc
Q 025824 156 SFDFIFVDAD---KDNYLNYHKRLIELVKVGGVIGYDNTLWN 194 (247)
Q Consensus 156 ~fD~v~id~~---~~~~~~~l~~~~~~L~~gG~lv~d~~~~~ 194 (247)
+||+|++... ..+...+++.+.+.|+|||.+++.+....
T Consensus 75 ~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 116 (170)
T 3i9f_A 75 SVDFILFANSFHDMDDKQHVISEVKRILKDDGRVIIIDWRKE 116 (170)
T ss_dssp CEEEEEEESCSTTCSCHHHHHHHHHHHEEEEEEEEEEEECSS
T ss_pred ceEEEEEccchhcccCHHHHHHHHHHhcCCCCEEEEEEcCcc
Confidence 8999998765 24567889999999999999999765443
No 206
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.34 E-value=1.5e-12 Score=108.54 Aligned_cols=109 Identities=16% Similarity=0.067 Sum_probs=84.0
Q ss_pred HHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhh
Q 025824 65 ADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVL 144 (247)
Q Consensus 65 ~~~~~~l~~l~~~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l 144 (247)
+.....+...+...++.+|||||||+|..+..+++ ++.+|+++|+++.+++.+++.. +++++++|+.+.
T Consensus 20 ~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~-------~~~~~~~d~~~~- 88 (261)
T 3ege_A 20 IRIVNAIINLLNLPKGSVIADIGAGTGGYSVALAN---QGLFVYAVEPSIVMRQQAVVHP-------QVEWFTGYAENL- 88 (261)
T ss_dssp HHHHHHHHHHHCCCTTCEEEEETCTTSHHHHHHHT---TTCEEEEECSCHHHHHSSCCCT-------TEEEECCCTTSC-
T ss_pred HHHHHHHHHHhCCCCCCEEEEEcCcccHHHHHHHh---CCCEEEEEeCCHHHHHHHHhcc-------CCEEEECchhhC-
Confidence 44455555555556788999999999999999997 3789999999998887765432 699999999653
Q ss_pred HHHHhhhcCCCceeEEEEcCC---ccchHHHHHHHHhcCCCCeEEEEecc
Q 025824 145 DLLIQDEKNHGSFDFIFVDAD---KDNYLNYHKRLIELVKVGGVIGYDNT 191 (247)
Q Consensus 145 ~~l~~~~~~~~~fD~v~id~~---~~~~~~~l~~~~~~L~~gG~lv~d~~ 191 (247)
+ + ..++||+|++... ..+....++.+.+.|+ ||.+++-+.
T Consensus 89 ~-~-----~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lk-gG~~~~~~~ 131 (261)
T 3ege_A 89 A-L-----PDKSVDGVISILAIHHFSHLEKSFQEMQRIIR-DGTIVLLTF 131 (261)
T ss_dssp C-S-----CTTCBSEEEEESCGGGCSSHHHHHHHHHHHBC-SSCEEEEEE
T ss_pred C-C-----CCCCEeEEEEcchHhhccCHHHHHHHHHHHhC-CcEEEEEEc
Confidence 2 1 2579999998765 3566889999999999 996665443
No 207
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.34 E-value=7.3e-12 Score=110.02 Aligned_cols=114 Identities=20% Similarity=0.218 Sum_probs=89.6
Q ss_pred CHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhh
Q 025824 64 SADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPV 143 (247)
Q Consensus 64 ~~~~~~~l~~l~~~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~ 143 (247)
.+.....+..++ ..+..+|||+|||+|..++.++...+ .++|+++|+++.+++.|++++..+|+.++++++++|+.+.
T Consensus 203 ~~~la~~l~~~~-~~~~~~vLD~gCGsG~~~i~~a~~~~-~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~ 280 (373)
T 3tm4_A 203 KASIANAMIELA-ELDGGSVLDPMCGSGTILIELALRRY-SGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQL 280 (373)
T ss_dssp CHHHHHHHHHHH-TCCSCCEEETTCTTCHHHHHHHHTTC-CSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGG
T ss_pred cHHHHHHHHHhh-cCCCCEEEEccCcCcHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhC
Confidence 455566565566 56778999999999999999998754 5699999999999999999999999988899999999875
Q ss_pred hHHHHhhhcCCCceeEEEEcCCc-----------cchHHHHHHHHhcCCCCeEEE
Q 025824 144 LDLLIQDEKNHGSFDFIFVDADK-----------DNYLNYHKRLIELVKVGGVIG 187 (247)
Q Consensus 144 l~~l~~~~~~~~~fD~v~id~~~-----------~~~~~~l~~~~~~L~~gG~lv 187 (247)
.. ..++||+|+++.+. .-|..+++.+.+.| +|+.++
T Consensus 281 ~~-------~~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l-~g~~~~ 327 (373)
T 3tm4_A 281 SQ-------YVDSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVL-EKRGVF 327 (373)
T ss_dssp GG-------TCSCEEEEEEECCCC------CCHHHHHHHHHHHHHHHE-EEEEEE
T ss_pred Cc-------ccCCcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHc-CCeEEE
Confidence 32 14789999998761 12456777788878 444443
No 208
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.34 E-value=1.2e-11 Score=104.52 Aligned_cols=108 Identities=15% Similarity=0.061 Sum_probs=77.2
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeC-CcchHHHHHHHH-----HHcCCC----CcEEEEEecchhhhHHH
Q 025824 78 VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDI-NRENYELGLPVI-----QKAGVA----HKIDFREGPALPVLDLL 147 (247)
Q Consensus 78 ~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~-~~~~~~~a~~~~-----~~~g~~----~~i~~~~gd~~~~l~~l 147 (247)
.+.++|||+|||+|..++.+++. + ..+|+++|+ ++.+++.|++++ +..++. +++++...+..+....+
T Consensus 78 ~~~~~vLDlG~G~G~~~~~~a~~-~-~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 155 (281)
T 3bzb_A 78 IAGKTVCELGAGAGLVSIVAFLA-G-ADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSL 155 (281)
T ss_dssp TTTCEEEETTCTTSHHHHHHHHT-T-CSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHH
T ss_pred cCCCeEEEecccccHHHHHHHHc-C-CCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHH
Confidence 46789999999999999988875 2 359999999 899999999999 555554 47888866654432222
Q ss_pred HhhhcCCCceeEEEE-cCC--ccchHHHHHHHHhcCC---C--CeEEEE
Q 025824 148 IQDEKNHGSFDFIFV-DAD--KDNYLNYHKRLIELVK---V--GGVIGY 188 (247)
Q Consensus 148 ~~~~~~~~~fD~v~i-d~~--~~~~~~~l~~~~~~L~---~--gG~lv~ 188 (247)
...- ..++||+|++ |.. ......+++.+.++|+ | ||.+++
T Consensus 156 ~~~~-~~~~fD~Ii~~dvl~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v 203 (281)
T 3bzb_A 156 QRCT-GLQRFQVVLLADLLSFHQAHDALLRSVKMLLALPANDPTAVALV 203 (281)
T ss_dssp HHHH-SCSSBSEEEEESCCSCGGGHHHHHHHHHHHBCCTTTCTTCEEEE
T ss_pred Hhhc-cCCCCCEEEEeCcccChHHHHHHHHHHHHHhcccCCCCCCEEEE
Confidence 1100 1478999987 543 3456788999999999 9 997665
No 209
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=99.33 E-value=2.7e-12 Score=107.10 Aligned_cols=108 Identities=18% Similarity=0.146 Sum_probs=80.9
Q ss_pred CCCEEEEEcccccHHHHHHHhh-------CCC----CCEEEEEeCCc--------------chHHHHHHHHHHc------
Q 025824 79 NAKNTMEIGVYTGYSLLATALA-------LPD----DGKILAMDINR--------------ENYELGLPVIQKA------ 127 (247)
Q Consensus 79 ~~~~vLEiG~g~G~st~~la~~-------~~~----~~~v~~iD~~~--------------~~~~~a~~~~~~~------ 127 (247)
++.+|||||+|+|++++.+++. .|. ..+++++|.+| +..+.|+++++..
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g 139 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 139 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccc
Confidence 5579999999999999987765 342 25899999987 4455777777651
Q ss_pred ----CCC---CcEEEEEecchhhhHHHHhhhcCCCceeEEEEcCC--ccc----hHHHHHHHHhcCCCCeEEEE
Q 025824 128 ----GVA---HKIDFREGPALPVLDLLIQDEKNHGSFDFIFVDAD--KDN----YLNYHKRLIELVKVGGVIGY 188 (247)
Q Consensus 128 ----g~~---~~i~~~~gd~~~~l~~l~~~~~~~~~fD~v~id~~--~~~----~~~~l~~~~~~L~~gG~lv~ 188 (247)
.+. .+++++.||+.+.++.+.... ..+||+||+|+. +.+ +.++|+.+.++|+|||+++.
T Consensus 140 ~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~--~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~t 211 (257)
T 2qy6_A 140 CHRLLLDEGRVTLDLWFGDINELISQLDDSL--NQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLAT 211 (257)
T ss_dssp EEEEEEC--CEEEEEEESCHHHHGGGSCGGG--TTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEE
T ss_pred hhheeccCCceEEEEEECcHHHHHhhccccc--CCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEEE
Confidence 121 367899999999888752100 137999999984 212 57899999999999999995
No 210
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.33 E-value=5.6e-12 Score=107.68 Aligned_cols=110 Identities=17% Similarity=0.168 Sum_probs=77.4
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCC-----cEEEEEecchhhh--HHHHhhh
Q 025824 79 NAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAH-----KIDFREGPALPVL--DLLIQDE 151 (247)
Q Consensus 79 ~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~-----~i~~~~gd~~~~l--~~l~~~~ 151 (247)
+..+|||||||+|..+..++.. ...+|+++|+++++++.|++.....+... ++++.++|..... ..+.. .
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~--~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~-~ 124 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYG--EIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVRE-V 124 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHT-T
T ss_pred CCCeEEEEecCCcHhHHHHHhc--CCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhc-c
Confidence 3579999999999766555543 24799999999999999999887765421 2678787773211 11110 0
Q ss_pred cCCCceeEEEEcCC------ccchHHHHHHHHhcCCCCeEEEEecc
Q 025824 152 KNHGSFDFIFVDAD------KDNYLNYHKRLIELVKVGGVIGYDNT 191 (247)
Q Consensus 152 ~~~~~fD~v~id~~------~~~~~~~l~~~~~~L~~gG~lv~d~~ 191 (247)
...++||+|++-.. ..+....++.+.++|||||++++...
T Consensus 125 ~~~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~ 170 (302)
T 2vdw_A 125 FYFGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTM 170 (302)
T ss_dssp CCSSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ccCCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 02478999986432 13457899999999999999998644
No 211
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.33 E-value=4.3e-12 Score=106.81 Aligned_cols=167 Identities=19% Similarity=0.156 Sum_probs=104.5
Q ss_pred ccccccccccccccCCcHHHHHHHHHhcCCCCCcHHHHHHH-HHHHhCCCCccccCHHHHHHHHHH-HhhcCCCEEEEEc
Q 025824 10 NQQGRHQEVGHKSLLQSDALYQYILETSVYPREPESMKELR-ELTAKHPWNIMTTSADEGQFLNML-LKLVNAKNTMEIG 87 (247)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~l~~l-~~~~~~~~vLEiG 87 (247)
+.+-+...|....+..-..+.+++.+. ...+.+..+- ..+...-. +. -.+..-.++... +...++.+|||+|
T Consensus 40 ~~~Rl~~r~~~~~~~~~~~y~~~l~~~----~~~~e~~~l~~~lt~~~t~-Ff-Rd~~~f~~l~~~llp~~~~~rIld~G 113 (274)
T 1af7_A 40 VYNRLVRRLRALGLDDFGRYLSMLEAN----QNSAEWQAFINALTTNLTA-FF-REAHHFPILAEHARRRHGEYRVWSAA 113 (274)
T ss_dssp HHHHHHHHHHHHTCCCHHHHHHHHHHC----TTCTHHHHHHHHHCCCCCC-TT-TTTTHHHHHHHHHHHSCSCEEEEESC
T ss_pred HHHHHHHHHHHcCCCCHHHHHHHHccC----CCHHHHHHHHHHHhhcCcc-cc-CChHHHHHHHHHccCCCCCcEEEEee
Confidence 333344445455666667777777642 2233444443 33322222 22 134455555543 3322456899999
Q ss_pred ccccH----HHHHHHhhCCC---CCEEEEEeCCcchHHHHHHHHH--------------H---------cC-------CC
Q 025824 88 VYTGY----SLLATALALPD---DGKILAMDINRENYELGLPVIQ--------------K---------AG-------VA 130 (247)
Q Consensus 88 ~g~G~----st~~la~~~~~---~~~v~~iD~~~~~~~~a~~~~~--------------~---------~g-------~~ 130 (247)
||+|. .++.+++.++. +.+|+++|+|+++++.|++.+- + .| +.
T Consensus 114 CgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~~~~v~~~lr 193 (274)
T 1af7_A 114 ASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEGLVRVRQELA 193 (274)
T ss_dssp CTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCSEEEECHHHH
T ss_pred ccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCCceeechhhc
Confidence 99998 45556665442 3599999999999999998641 0 00 01
Q ss_pred CcEEEEEecchhh-hHHHHhhhcCCCceeEEEEcCC-----ccchHHHHHHHHhcCCCCeEEEEe
Q 025824 131 HKIDFREGPALPV-LDLLIQDEKNHGSFDFIFVDAD-----KDNYLNYHKRLIELVKVGGVIGYD 189 (247)
Q Consensus 131 ~~i~~~~gd~~~~-l~~l~~~~~~~~~fD~v~id~~-----~~~~~~~l~~~~~~L~~gG~lv~d 189 (247)
.+|+|.++|..+. ++ ..++||+|++... .......++.+.+.|+|||++++.
T Consensus 194 ~~V~F~~~dl~~~~~~-------~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 194 NYVEFSSVNLLEKQYN-------VPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp TTEEEEECCTTCSSCC-------CCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEEC
T ss_pred ccCeEEecccCCCCCC-------cCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 3699999998762 11 0368999998654 233467888899999999999973
No 212
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.33 E-value=3.5e-12 Score=98.90 Aligned_cols=100 Identities=14% Similarity=0.163 Sum_probs=74.7
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhh--HHHHhhhcCCC
Q 025824 78 VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVL--DLLIQDEKNHG 155 (247)
Q Consensus 78 ~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l--~~l~~~~~~~~ 155 (247)
.+..+|||+|||+|..+..+++.++++.+++++|+++ +++. .+++++.+|+.+.. ..+. +....+
T Consensus 21 ~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~-----------~~~~~~~~d~~~~~~~~~~~-~~~~~~ 87 (180)
T 1ej0_A 21 KPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI-----------VGVDFLQGDFRDELVMKALL-ERVGDS 87 (180)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC-----------TTEEEEESCTTSHHHHHHHH-HHHTTC
T ss_pred CCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc-----------CcEEEEEcccccchhhhhhh-ccCCCC
Confidence 4567999999999999999999865468999999999 6432 46999999987641 0010 000247
Q ss_pred ceeEEEEcCCcc---ch-----------HHHHHHHHhcCCCCeEEEEec
Q 025824 156 SFDFIFVDADKD---NY-----------LNYHKRLIELVKVGGVIGYDN 190 (247)
Q Consensus 156 ~fD~v~id~~~~---~~-----------~~~l~~~~~~L~~gG~lv~d~ 190 (247)
+||+|+++.... .. ...++.+.++|+|||.+++..
T Consensus 88 ~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 136 (180)
T 1ej0_A 88 KVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKV 136 (180)
T ss_dssp CEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 899999976521 11 578888999999999999743
No 213
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.33 E-value=3.4e-12 Score=104.66 Aligned_cols=99 Identities=14% Similarity=0.195 Sum_probs=81.5
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCce
Q 025824 78 VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSF 157 (247)
Q Consensus 78 ~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~f 157 (247)
.++.+|||||||+|..+..++.. +.+++++|+++.+++.++++. ...+++++++|+.+.. + ..++|
T Consensus 52 ~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~----~~~~~~~~~~d~~~~~--~-----~~~~f 117 (242)
T 3l8d_A 52 KKEAEVLDVGCGDGYGTYKLSRT---GYKAVGVDISEVMIQKGKERG----EGPDLSFIKGDLSSLP--F-----ENEQF 117 (242)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHTTT----CBTTEEEEECBTTBCS--S-----CTTCE
T ss_pred CCCCeEEEEcCCCCHHHHHHHHc---CCeEEEEECCHHHHHHHHhhc----ccCCceEEEcchhcCC--C-----CCCCc
Confidence 35679999999999999999986 569999999999999988764 2357999999997642 1 25799
Q ss_pred eEEEEcCC---ccchHHHHHHHHhcCCCCeEEEEec
Q 025824 158 DFIFVDAD---KDNYLNYHKRLIELVKVGGVIGYDN 190 (247)
Q Consensus 158 D~v~id~~---~~~~~~~l~~~~~~L~~gG~lv~d~ 190 (247)
|+|++... ..+....++.+.+.|+|||++++..
T Consensus 118 D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 153 (242)
T 3l8d_A 118 EAIMAINSLEWTEEPLRALNEIKRVLKSDGYACIAI 153 (242)
T ss_dssp EEEEEESCTTSSSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cEEEEcChHhhccCHHHHHHHHHHHhCCCeEEEEEE
Confidence 99998654 3455688999999999999999865
No 214
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.32 E-value=9.6e-12 Score=106.37 Aligned_cols=107 Identities=14% Similarity=0.078 Sum_probs=82.2
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcC------CCCcEEEEEecchhhh--HHHHhh
Q 025824 79 NAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAG------VAHKIDFREGPALPVL--DLLIQD 150 (247)
Q Consensus 79 ~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g------~~~~i~~~~gd~~~~l--~~l~~~ 150 (247)
++.+|||+|||+|..+..+++. + ..+++++|+++.+++.|++.+...+ ...+++++++|+.+.. ..+..
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~-~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~- 110 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKG-R-INKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRD- 110 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHT-T-CSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSS-
T ss_pred CCCEEEEECCCCcHHHHHHHhc-C-CCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhccc-
Confidence 6789999999999999998873 3 6799999999999999999887642 2347999999997642 01100
Q ss_pred hcCCCceeEEEEcCCc-------cchHHHHHHHHhcCCCCeEEEEec
Q 025824 151 EKNHGSFDFIFVDADK-------DNYLNYHKRLIELVKVGGVIGYDN 190 (247)
Q Consensus 151 ~~~~~~fD~v~id~~~-------~~~~~~l~~~~~~L~~gG~lv~d~ 190 (247)
..++||+|++.... ......+..+.+.|+|||++++..
T Consensus 111 --~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 155 (313)
T 3bgv_A 111 --PQMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTT 155 (313)
T ss_dssp --TTCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred --CCCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEec
Confidence 13589999987542 223578899999999999999753
No 215
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.32 E-value=1.1e-11 Score=108.83 Aligned_cols=120 Identities=17% Similarity=0.123 Sum_probs=85.7
Q ss_pred ccCHHHHH-HHHHHHhhc--CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEe
Q 025824 62 TTSADEGQ-FLNMLLKLV--NAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREG 138 (247)
Q Consensus 62 ~~~~~~~~-~l~~l~~~~--~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~g 138 (247)
+..+...+ ++..+.... .+.+|||+|||+|..++.+++. ..+|+++|+++++++.|++|++.+|+ ++++++.+
T Consensus 193 Q~n~~~~~~l~~~~~~~~~~~~~~vLDl~cG~G~~~l~la~~---~~~V~gvd~~~~ai~~a~~n~~~ng~-~~v~~~~~ 268 (369)
T 3bt7_A 193 QPNAAMNIQMLEWALDVTKGSKGDLLELYCGNGNFSLALARN---FDRVLATEIAKPSVAAAQYNIAANHI-DNVQIIRM 268 (369)
T ss_dssp CSBHHHHHHHHHHHHHHTTTCCSEEEEESCTTSHHHHHHGGG---SSEEEEECCCHHHHHHHHHHHHHTTC-CSEEEECC
T ss_pred cCCHHHHHHHHHHHHHHhhcCCCEEEEccCCCCHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHHcCC-CceEEEEC
Confidence 34444433 333443332 3578999999999999999874 46999999999999999999999988 57999999
Q ss_pred cchhhhHHHHhhh---------cCCCceeEEEEcCCccchHHHHHHHHhcCCCCeEEEE
Q 025824 139 PALPVLDLLIQDE---------KNHGSFDFIFVDADKDNYLNYHKRLIELVKVGGVIGY 188 (247)
Q Consensus 139 d~~~~l~~l~~~~---------~~~~~fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv~ 188 (247)
|+.+.++.+...+ ....+||+|++|.+..... ..+.+.|+++|.|+.
T Consensus 269 d~~~~~~~~~~~~~~~~l~~~~~~~~~fD~Vv~dPPr~g~~---~~~~~~l~~~g~ivy 324 (369)
T 3bt7_A 269 AAEEFTQAMNGVREFNRLQGIDLKSYQCETIFVDPPRSGLD---SETEKMVQAYPRILY 324 (369)
T ss_dssp CSHHHHHHHSSCCCCTTGGGSCGGGCCEEEEEECCCTTCCC---HHHHHHHTTSSEEEE
T ss_pred CHHHHHHHHhhccccccccccccccCCCCEEEECcCccccH---HHHHHHHhCCCEEEE
Confidence 9988776552100 0003799999998854332 334455567777775
No 216
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.31 E-value=4.4e-11 Score=95.86 Aligned_cols=109 Identities=12% Similarity=0.149 Sum_probs=83.8
Q ss_pred CHHHHHHHHHHHh---hcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecc
Q 025824 64 SADEGQFLNMLLK---LVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPA 140 (247)
Q Consensus 64 ~~~~~~~l~~l~~---~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~ 140 (247)
.+.....+...+. ..+..+|||+|||+|..+..++.. + ..+++++|+++.+++.+++++...++ +++++++|+
T Consensus 31 ~~~~~~~l~~~~~~~~~~~~~~vlD~g~G~G~~~~~l~~~-~-~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~ 106 (207)
T 1wy7_A 31 PGNAASELLWLAYSLGDIEGKVVADLGAGTGVLSYGALLL-G-AKEVICVEVDKEAVDVLIENLGEFKG--KFKVFIGDV 106 (207)
T ss_dssp CHHHHHHHHHHHHHTTSSTTCEEEEETCTTCHHHHHHHHT-T-CSEEEEEESCHHHHHHHHHHTGGGTT--SEEEEESCG
T ss_pred chHHHHHHHHHHHHcCCCCcCEEEEeeCCCCHHHHHHHHc-C-CCEEEEEECCHHHHHHHHHHHHHcCC--CEEEEECch
Confidence 3444444444443 235679999999999999999876 2 35899999999999999999998877 799999998
Q ss_pred hhhhHHHHhhhcCCCceeEEEEcCCc-----cchHHHHHHHHhcCCCCeEEEE
Q 025824 141 LPVLDLLIQDEKNHGSFDFIFVDADK-----DNYLNYHKRLIELVKVGGVIGY 188 (247)
Q Consensus 141 ~~~l~~l~~~~~~~~~fD~v~id~~~-----~~~~~~l~~~~~~L~~gG~lv~ 188 (247)
.+. .++||+|+++.+. .....+++.+.+.+ |++++.
T Consensus 107 ~~~----------~~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~l--~~~~~~ 147 (207)
T 1wy7_A 107 SEF----------NSRVDIVIMNPPFGSQRKHADRPFLLKAFEIS--DVVYSI 147 (207)
T ss_dssp GGC----------CCCCSEEEECCCCSSSSTTTTHHHHHHHHHHC--SEEEEE
T ss_pred HHc----------CCCCCEEEEcCCCccccCCchHHHHHHHHHhc--CcEEEE
Confidence 763 2589999999762 23457788888887 666554
No 217
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.30 E-value=1.3e-11 Score=97.43 Aligned_cols=105 Identities=10% Similarity=0.073 Sum_probs=82.9
Q ss_pred HHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHH
Q 025824 68 GQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLL 147 (247)
Q Consensus 68 ~~~l~~l~~~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l 147 (247)
..++..+ ..++.+|||+|||+|..+..++.. +.+++++|+++.+++.+++++ .+++++++|+.+.. +
T Consensus 37 ~~~l~~~--~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~~D~~~~~~~~a~~~~------~~~~~~~~d~~~~~--~ 103 (195)
T 3cgg_A 37 ARLIDAM--APRGAKILDAGCGQGRIGGYLSKQ---GHDVLGTDLDPILIDYAKQDF------PEARWVVGDLSVDQ--I 103 (195)
T ss_dssp HHHHHHH--SCTTCEEEEETCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHC------TTSEEEECCTTTSC--C
T ss_pred HHHHHHh--ccCCCeEEEECCCCCHHHHHHHHC---CCcEEEEcCCHHHHHHHHHhC------CCCcEEEcccccCC--C
Confidence 4555555 346789999999999999999986 569999999999999998875 24889999987641 1
Q ss_pred HhhhcCCCceeEEEEcCC-c-----cchHHHHHHHHhcCCCCeEEEEec
Q 025824 148 IQDEKNHGSFDFIFVDAD-K-----DNYLNYHKRLIELVKVGGVIGYDN 190 (247)
Q Consensus 148 ~~~~~~~~~fD~v~id~~-~-----~~~~~~l~~~~~~L~~gG~lv~d~ 190 (247)
..++||+|++... . .....+++.+.+.|+|||.+++..
T Consensus 104 -----~~~~~D~i~~~~~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~ 147 (195)
T 3cgg_A 104 -----SETDFDLIVSAGNVMGFLAEDGREPALANIHRALGADGRAVIGF 147 (195)
T ss_dssp -----CCCCEEEEEECCCCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred -----CCCceeEEEECCcHHhhcChHHHHHHHHHHHHHhCCCCEEEEEe
Confidence 2478999998733 1 334678899999999999999853
No 218
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.30 E-value=5.2e-12 Score=105.51 Aligned_cols=102 Identities=15% Similarity=0.162 Sum_probs=74.7
Q ss_pred HHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchh-hhHHHHhhhc
Q 025824 74 LLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALP-VLDLLIQDEK 152 (247)
Q Consensus 74 l~~~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~-~l~~l~~~~~ 152 (247)
.+...+..+|||||||+|..+..+++. +.+|+++|+++.+++.|++++... .+.....+... ....+
T Consensus 40 ~l~l~~g~~VLDlGcGtG~~a~~La~~---g~~V~gvD~S~~ml~~Ar~~~~~~----~v~~~~~~~~~~~~~~~----- 107 (261)
T 3iv6_A 40 LENIVPGSTVAVIGASTRFLIEKALER---GASVTVFDFSQRMCDDLAEALADR----CVTIDLLDITAEIPKEL----- 107 (261)
T ss_dssp TTTCCTTCEEEEECTTCHHHHHHHHHT---TCEEEEEESCHHHHHHHHHHTSSS----CCEEEECCTTSCCCGGG-----
T ss_pred hcCCCCcCEEEEEeCcchHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHhc----cceeeeeeccccccccc-----
Confidence 334556789999999999999999975 579999999999999999987653 12332222211 01111
Q ss_pred CCCceeEEEEcCCc-----cchHHHHHHHHhcCCCCeEEEEe
Q 025824 153 NHGSFDFIFVDADK-----DNYLNYHKRLIELVKVGGVIGYD 189 (247)
Q Consensus 153 ~~~~fD~v~id~~~-----~~~~~~l~~~~~~L~~gG~lv~d 189 (247)
.++||+|+++..- ......+..+.++| |||.+++.
T Consensus 108 -~~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS 147 (261)
T 3iv6_A 108 -AGHFDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRAS 147 (261)
T ss_dssp -TTCCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEE
T ss_pred -CCCccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEE
Confidence 4689999998652 33456788888999 99999874
No 219
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.30 E-value=1.2e-12 Score=108.75 Aligned_cols=110 Identities=18% Similarity=0.092 Sum_probs=82.3
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCC----------------------------
Q 025824 78 VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGV---------------------------- 129 (247)
Q Consensus 78 ~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~---------------------------- 129 (247)
.++.+|||+|||+|..+..++.... .+|+++|+++.+++.+++++...+.
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 132 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSACESF--TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKL 132 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTGGGTE--EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHH
T ss_pred cCCCEEEEECCCccHHHHHHhhccc--CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHh
Confidence 3457899999999999988876522 4899999999999999998865431
Q ss_pred CCcE-EEEEecchhhhHHHHhhhcCCCceeEEEEcCCcc-------chHHHHHHHHhcCCCCeEEEEeccc
Q 025824 130 AHKI-DFREGPALPVLDLLIQDEKNHGSFDFIFVDADKD-------NYLNYHKRLIELVKVGGVIGYDNTL 192 (247)
Q Consensus 130 ~~~i-~~~~gd~~~~l~~l~~~~~~~~~fD~v~id~~~~-------~~~~~l~~~~~~L~~gG~lv~d~~~ 192 (247)
..++ +++++|+.+..+.. .. ..++||+|++..... .....++.+.++|+|||++++.+..
T Consensus 133 ~~~v~~~~~~d~~~~~~~~-~~--~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 200 (265)
T 2i62_A 133 RRAIKQVLKCDVTQSQPLG-GV--SLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDAL 200 (265)
T ss_dssp HHHEEEEEECCTTSSSTTT-TC--CCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEES
T ss_pred hhhheeEEEeeeccCCCCC-cc--ccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecC
Confidence 0137 89999987653211 00 127899999865422 5677889999999999999987643
No 220
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.30 E-value=1e-11 Score=101.56 Aligned_cols=98 Identities=10% Similarity=0.093 Sum_probs=79.2
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCce
Q 025824 78 VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSF 157 (247)
Q Consensus 78 ~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~f 157 (247)
.++.+|||+|||+|..+..+++..+ +++++|+++.+++.|++++ .+++++++|+.+... .++|
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~~---~v~~~D~s~~~~~~a~~~~------~~~~~~~~d~~~~~~--------~~~~ 101 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEFG---DTAGLELSEDMLTHARKRL------PDATLHQGDMRDFRL--------GRKF 101 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHHS---EEEEEESCHHHHHHHHHHC------TTCEEEECCTTTCCC--------SSCE
T ss_pred CCCCeEEEecccCCHHHHHHHHhCC---cEEEEeCCHHHHHHHHHhC------CCCEEEECCHHHccc--------CCCC
Confidence 4568999999999999999998743 8999999999999998864 358999999876421 4689
Q ss_pred eEEEEcCC-------ccchHHHHHHHHhcCCCCeEEEEeccc
Q 025824 158 DFIFVDAD-------KDNYLNYHKRLIELVKVGGVIGYDNTL 192 (247)
Q Consensus 158 D~v~id~~-------~~~~~~~l~~~~~~L~~gG~lv~d~~~ 192 (247)
|+|++... .......++.+.+.|+|||.++++...
T Consensus 102 D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 143 (239)
T 3bxo_A 102 SAVVSMFSSVGYLKTTEELGAAVASFAEHLEPGGVVVVEPWW 143 (239)
T ss_dssp EEEEECTTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEECCCC
T ss_pred cEEEEcCchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecc
Confidence 99995332 134567889999999999999998643
No 221
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.29 E-value=3.7e-12 Score=102.47 Aligned_cols=95 Identities=14% Similarity=0.179 Sum_probs=76.7
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCcee
Q 025824 79 NAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFD 158 (247)
Q Consensus 79 ~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~fD 158 (247)
++.+|||+|||+|..+..+ + ..+++++|+++.+++.+++++ .+++++++|+.+. + + ..++||
T Consensus 36 ~~~~vLdiG~G~G~~~~~l----~-~~~v~~vD~s~~~~~~a~~~~------~~~~~~~~d~~~~-~-~-----~~~~fD 97 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL----P-YPQKVGVEPSEAMLAVGRRRA------PEATWVRAWGEAL-P-F-----PGESFD 97 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC----C-CSEEEEECCCHHHHHHHHHHC------TTSEEECCCTTSC-C-S-----CSSCEE
T ss_pred CCCeEEEECCCCCHhHHhC----C-CCeEEEEeCCHHHHHHHHHhC------CCcEEEEcccccC-C-C-----CCCcEE
Confidence 5679999999999988776 2 239999999999999998876 4688999998654 2 1 257899
Q ss_pred EEEEcCC---ccchHHHHHHHHhcCCCCeEEEEecc
Q 025824 159 FIFVDAD---KDNYLNYHKRLIELVKVGGVIGYDNT 191 (247)
Q Consensus 159 ~v~id~~---~~~~~~~l~~~~~~L~~gG~lv~d~~ 191 (247)
+|++... ..+....++.+.+.|+|||.+++...
T Consensus 98 ~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 133 (211)
T 2gs9_A 98 VVLLFTTLEFVEDVERVLLEARRVLRPGGALVVGVL 133 (211)
T ss_dssp EEEEESCTTTCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEEcChhhhcCCHHHHHHHHHHHcCCCCEEEEEec
Confidence 9998765 23567889999999999999998643
No 222
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.28 E-value=3.9e-12 Score=102.15 Aligned_cols=101 Identities=9% Similarity=0.035 Sum_probs=80.5
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCce
Q 025824 78 VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSF 157 (247)
Q Consensus 78 ~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~f 157 (247)
.+..+|||+|||+|..+..+++..+ .+++++|+++.+++.+++++.. ..+++++++|+.+. + + ..++|
T Consensus 41 ~~~~~vLdiGcG~G~~~~~l~~~~~--~~v~~~D~s~~~~~~a~~~~~~---~~~i~~~~~d~~~~-~-~-----~~~~f 108 (215)
T 2pxx_A 41 RPEDRILVLGCGNSALSYELFLGGF--PNVTSVDYSSVVVAAMQACYAH---VPQLRWETMDVRKL-D-F-----PSASF 108 (215)
T ss_dssp CTTCCEEEETCTTCSHHHHHHHTTC--CCEEEEESCHHHHHHHHHHTTT---CTTCEEEECCTTSC-C-S-----CSSCE
T ss_pred CCCCeEEEECCCCcHHHHHHHHcCC--CcEEEEeCCHHHHHHHHHhccc---CCCcEEEEcchhcC-C-C-----CCCcc
Confidence 4567999999999999999998633 3899999999999999998764 24799999998764 2 1 25789
Q ss_pred eEEEEcCC------------------ccchHHHHHHHHhcCCCCeEEEEec
Q 025824 158 DFIFVDAD------------------KDNYLNYHKRLIELVKVGGVIGYDN 190 (247)
Q Consensus 158 D~v~id~~------------------~~~~~~~l~~~~~~L~~gG~lv~d~ 190 (247)
|+|++... .......++.+.++|+|||.+++-.
T Consensus 109 D~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 159 (215)
T 2pxx_A 109 DVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMT 159 (215)
T ss_dssp EEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEe
Confidence 99997543 1234678899999999999999753
No 223
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.28 E-value=3e-11 Score=108.16 Aligned_cols=115 Identities=10% Similarity=0.100 Sum_probs=88.6
Q ss_pred HHHHHHHHHhh---cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhh
Q 025824 67 EGQFLNMLLKL---VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPV 143 (247)
Q Consensus 67 ~~~~l~~l~~~---~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~ 143 (247)
...++..++.. .+..+|||+|||+|..++.++.. ..+|+++|+++++++.|++|++..++. +++++++|+.+.
T Consensus 271 ~e~l~~~~~~~l~~~~~~~VLDlgcG~G~~~~~la~~---~~~V~gvD~s~~al~~A~~n~~~~~~~-~v~f~~~d~~~~ 346 (433)
T 1uwv_A 271 NQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQ---AASVVGVEGVPALVEKGQQNARLNGLQ-NVTFYHENLEED 346 (433)
T ss_dssp HHHHHHHHHHHHTCCTTCEEEEESCTTTTTHHHHHTT---SSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCTTSC
T ss_pred HHHHHHHHHHhhcCCCCCEEEECCCCCCHHHHHHHhh---CCEEEEEeCCHHHHHHHHHHHHHcCCC-ceEEEECCHHHH
Confidence 34444444433 35579999999999999999976 579999999999999999999998885 799999999876
Q ss_pred hHHHHhhhcCCCceeEEEEcCCccchHHHHHHHHhcCCCCeEEEEe
Q 025824 144 LDLLIQDEKNHGSFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYD 189 (247)
Q Consensus 144 l~~l~~~~~~~~~fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv~d 189 (247)
++.+.. ..++||+|++|.+.......++.+. .++|++++.+.
T Consensus 347 l~~~~~---~~~~fD~Vv~dPPr~g~~~~~~~l~-~~~p~~ivyvs 388 (433)
T 1uwv_A 347 VTKQPW---AKNGFDKVLLDPARAGAAGVMQQII-KLEPIRIVYVS 388 (433)
T ss_dssp CSSSGG---GTTCCSEEEECCCTTCCHHHHHHHH-HHCCSEEEEEE
T ss_pred hhhhhh---hcCCCCEEEECCCCccHHHHHHHHH-hcCCCeEEEEE
Confidence 543110 1468999999998665556665554 47899988763
No 224
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=99.28 E-value=1.2e-11 Score=104.52 Aligned_cols=107 Identities=15% Similarity=0.137 Sum_probs=89.0
Q ss_pred HhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHc--C--CCCcEEEEEecchhhhHHHHhh
Q 025824 75 LKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKA--G--VAHKIDFREGPALPVLDLLIQD 150 (247)
Q Consensus 75 ~~~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~--g--~~~~i~~~~gd~~~~l~~l~~~ 150 (247)
....+|++||-||.|.|..+..+++..+ ..+|+.+|++++.++.+++++... + -.+|++++.+|+.+++..-
T Consensus 79 ~~~p~pk~VLIiGgGdG~~~revlk~~~-v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~--- 154 (294)
T 3o4f_A 79 LAHGHAKHVLIIGGGDGAMLREVTRHKN-VESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQT--- 154 (294)
T ss_dssp HHSSCCCEEEEESCTTSHHHHHHHTCTT-CCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCS---
T ss_pred hhCCCCCeEEEECCCchHHHHHHHHcCC-cceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhc---
Confidence 3456789999999999999999987644 679999999999999999998642 2 1368999999999988642
Q ss_pred hcCCCceeEEEEcCCcc-------chHHHHHHHHhcCCCCeEEEE
Q 025824 151 EKNHGSFDFIFVDADKD-------NYLNYHKRLIELVKVGGVIGY 188 (247)
Q Consensus 151 ~~~~~~fD~v~id~~~~-------~~~~~l~~~~~~L~~gG~lv~ 188 (247)
.++||+|++|.... -..++++.|.+.|+|||+++.
T Consensus 155 ---~~~yDvIi~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~ 196 (294)
T 3o4f_A 155 ---SQTFDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVA 196 (294)
T ss_dssp ---SCCEEEEEESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEE
T ss_pred ---cccCCEEEEeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEE
Confidence 57899999997521 235789999999999999996
No 225
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.27 E-value=2e-11 Score=103.39 Aligned_cols=108 Identities=14% Similarity=0.117 Sum_probs=75.9
Q ss_pred CCCEEEEEcccccHHHHHHHh----hCCCCCEE--EEEeCCcchHHHHHHHHHHc-CCCCcEEE--EEecchhhhHHHHh
Q 025824 79 NAKNTMEIGVYTGYSLLATAL----ALPDDGKI--LAMDINRENYELGLPVIQKA-GVAHKIDF--REGPALPVLDLLIQ 149 (247)
Q Consensus 79 ~~~~vLEiG~g~G~st~~la~----~~~~~~~v--~~iD~~~~~~~~a~~~~~~~-g~~~~i~~--~~gd~~~~l~~l~~ 149 (247)
++.+|||||||+|..+..++. ..+ +.++ +++|+++++++.|++.+... ++ .++++ ..+++.+......
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l~~~~~-~~~v~~~~vD~S~~ml~~a~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~- 128 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKVQAQYP-GVCINNEVVEPSAEQIAKYKELVAKTSNL-ENVKFAWHKETSSEYQSRML- 128 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHHHHHST-TCEEEEEEECSCHHHHHHHHHHHHTCSSC-TTEEEEEECSCHHHHHHHHH-
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHhhCC-CceeeEEEEeCCHHHHHHHHHHHHhccCC-CcceEEEEecchhhhhhhhc-
Confidence 456899999999987765443 233 5654 99999999999999998764 33 34555 4455543321110
Q ss_pred hhcCCCceeEEEEcCC---ccchHHHHHHHHhcCCCCeEEEEe
Q 025824 150 DEKNHGSFDFIFVDAD---KDNYLNYHKRLIELVKVGGVIGYD 189 (247)
Q Consensus 150 ~~~~~~~fD~v~id~~---~~~~~~~l~~~~~~L~~gG~lv~d 189 (247)
.+..+++||+|++... ..+....++.+.++|||||.+++-
T Consensus 129 ~~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~ 171 (292)
T 2aot_A 129 EKKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLII 171 (292)
T ss_dssp TTTCCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEE
T ss_pred cccCCCceeEEEEeeeeeecCCHHHHHHHHHHHcCCCcEEEEE
Confidence 0002578999998755 345678999999999999999974
No 226
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.26 E-value=1.6e-11 Score=102.15 Aligned_cols=94 Identities=16% Similarity=0.145 Sum_probs=76.2
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCcee
Q 025824 79 NAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFD 158 (247)
Q Consensus 79 ~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~fD 158 (247)
++.+|||||||+|..+..+++. +.+++++|+++.+++.++++.. .+ ++++|+.+. + + ..++||
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~-----~~--~~~~d~~~~-~-~-----~~~~fD 116 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQER---GFEVVLVDPSKEMLEVAREKGV-----KN--VVEAKAEDL-P-F-----PSGAFE 116 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTT---TCEEEEEESCHHHHHHHHHHTC-----SC--EEECCTTSC-C-S-----CTTCEE
T ss_pred CCCeEEEeCCCcCHHHHHHHHc---CCeEEEEeCCHHHHHHHHhhcC-----CC--EEECcHHHC-C-C-----CCCCEE
Confidence 6789999999999999999875 5699999999999999988753 12 788888653 2 1 257899
Q ss_pred EEEEcCC----ccchHHHHHHHHhcCCCCeEEEEe
Q 025824 159 FIFVDAD----KDNYLNYHKRLIELVKVGGVIGYD 189 (247)
Q Consensus 159 ~v~id~~----~~~~~~~l~~~~~~L~~gG~lv~d 189 (247)
+|++... ..+....++.+.+.|+|||.+++.
T Consensus 117 ~v~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 151 (260)
T 2avn_A 117 AVLALGDVLSYVENKDKAFSEIRRVLVPDGLLIAT 151 (260)
T ss_dssp EEEECSSHHHHCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEcchhhhccccHHHHHHHHHHHcCCCeEEEEE
Confidence 9998654 234678899999999999999975
No 227
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.26 E-value=5.6e-11 Score=99.17 Aligned_cols=105 Identities=20% Similarity=0.222 Sum_probs=80.9
Q ss_pred HHHHHHHHHhh--cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhh
Q 025824 67 EGQFLNMLLKL--VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVL 144 (247)
Q Consensus 67 ~~~~l~~l~~~--~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l 144 (247)
...+...+... .++.+|||+|||+|..+..+++.++ +.+++++|+++.+++.|+++. .++.+..+|+.+.
T Consensus 71 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~------~~~~~~~~d~~~~- 142 (269)
T 1p91_A 71 RDAIVAQLRERLDDKATAVLDIGCGEGYYTHAFADALP-EITTFGLDVSKVAIKAAAKRY------PQVTFCVASSHRL- 142 (269)
T ss_dssp HHHHHHHHHHHSCTTCCEEEEETCTTSTTHHHHHHTCT-TSEEEEEESCHHHHHHHHHHC------TTSEEEECCTTSC-
T ss_pred HHHHHHHHHHhcCCCCCEEEEECCCCCHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHhC------CCcEEEEcchhhC-
Confidence 33344444433 3567999999999999999999875 689999999999999998764 3578999998653
Q ss_pred HHHHhhhcCCCceeEEEEcCCccchHHHHHHHHhcCCCCeEEEEe
Q 025824 145 DLLIQDEKNHGSFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYD 189 (247)
Q Consensus 145 ~~l~~~~~~~~~fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv~d 189 (247)
+ + ..++||+|+..... ..++.+.++|+|||.+++.
T Consensus 143 ~-~-----~~~~fD~v~~~~~~----~~l~~~~~~L~pgG~l~~~ 177 (269)
T 1p91_A 143 P-F-----SDTSMDAIIRIYAP----CKAEELARVVKPGGWVITA 177 (269)
T ss_dssp S-B-----CTTCEEEEEEESCC----CCHHHHHHHEEEEEEEEEE
T ss_pred C-C-----CCCceeEEEEeCCh----hhHHHHHHhcCCCcEEEEE
Confidence 2 1 24789999975542 3478889999999999875
No 228
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.25 E-value=5.8e-11 Score=94.79 Aligned_cols=91 Identities=12% Similarity=0.168 Sum_probs=72.7
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCcee
Q 025824 79 NAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFD 158 (247)
Q Consensus 79 ~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~fD 158 (247)
++.+|||+|||+|..+..++.. + ..+|+++|+++.+++.|++++. +++++++|+.+. .++||
T Consensus 51 ~~~~vlD~gcG~G~~~~~l~~~-~-~~~v~~vD~~~~~~~~a~~~~~------~~~~~~~d~~~~----------~~~~D 112 (200)
T 1ne2_A 51 GGRSVIDAGTGNGILACGSYLL-G-AESVTAFDIDPDAIETAKRNCG------GVNFMVADVSEI----------SGKYD 112 (200)
T ss_dssp BTSEEEEETCTTCHHHHHHHHT-T-BSEEEEEESCHHHHHHHHHHCT------TSEEEECCGGGC----------CCCEE
T ss_pred CCCEEEEEeCCccHHHHHHHHc-C-CCEEEEEECCHHHHHHHHHhcC------CCEEEECcHHHC----------CCCee
Confidence 5679999999999999999876 3 4689999999999999999875 589999998763 36899
Q ss_pred EEEEcCCc-----cchHHHHHHHHhcCCCCeEEEEe
Q 025824 159 FIFVDADK-----DNYLNYHKRLIELVKVGGVIGYD 189 (247)
Q Consensus 159 ~v~id~~~-----~~~~~~l~~~~~~L~~gG~lv~d 189 (247)
+|+++.+. .....+++.+.+.+ |+++++.
T Consensus 113 ~v~~~~p~~~~~~~~~~~~l~~~~~~~--g~~~~~~ 146 (200)
T 1ne2_A 113 TWIMNPPFGSVVKHSDRAFIDKAFETS--MWIYSIG 146 (200)
T ss_dssp EEEECCCC-------CHHHHHHHHHHE--EEEEEEE
T ss_pred EEEECCCchhccCchhHHHHHHHHHhc--CcEEEEE
Confidence 99998762 22346788888887 6655544
No 229
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.24 E-value=5.5e-11 Score=100.68 Aligned_cols=93 Identities=17% Similarity=0.062 Sum_probs=73.7
Q ss_pred CHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhh
Q 025824 64 SADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPV 143 (247)
Q Consensus 64 ~~~~~~~l~~l~~~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~ 143 (247)
.+.....+...+...+..+|||||||+|..+..+++. +.+|+++|+++.+++.+++++...+..++++++++|+.+.
T Consensus 13 d~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~ 89 (285)
T 1zq9_A 13 NPLIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEK---AKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKT 89 (285)
T ss_dssp CHHHHHHHHHHTCCCTTCEEEEECCTTSTTHHHHHHH---SSEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTS
T ss_pred CHHHHHHHHHhcCCCCCCEEEEEcCcccHHHHHHHhh---CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecc
Confidence 4554444444445556789999999999999999987 4699999999999999999988776656899999999764
Q ss_pred hHHHHhhhcCCCceeEEEEcCCccc
Q 025824 144 LDLLIQDEKNHGSFDFIFVDADKDN 168 (247)
Q Consensus 144 l~~l~~~~~~~~~fD~v~id~~~~~ 168 (247)
+ ..+||+|+.+.+...
T Consensus 90 -~--------~~~fD~vv~nlpy~~ 105 (285)
T 1zq9_A 90 -D--------LPFFDTCVANLPYQI 105 (285)
T ss_dssp -C--------CCCCSEEEEECCGGG
T ss_pred -c--------chhhcEEEEecCccc
Confidence 1 247999999876433
No 230
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.23 E-value=7.4e-11 Score=98.79 Aligned_cols=166 Identities=15% Similarity=0.216 Sum_probs=103.1
Q ss_pred ccccCCcHHHHHHHHHhcCCCCCcHHHHHHHHH-HHhCCCCcc-ccCHHHHHHHHHHHh----hcCCCEEEEEcccc--c
Q 025824 20 HKSLLQSDALYQYILETSVYPREPESMKELREL-TAKHPWNIM-TTSADEGQFLNMLLK----LVNAKNTMEIGVYT--G 91 (247)
Q Consensus 20 ~~~~~~~~~~~~y~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~-~~~~~~~~~l~~l~~----~~~~~~vLEiG~g~--G 91 (247)
.-+.+.+.++++|++--. ...+.-+++-+. ... +|.. .+......|+...+. .....+|||||||+ +
T Consensus 18 d~~~p~~aR~yd~~LgGk---~n~~~Dr~~~~~~~~~--~P~~~~~a~~nr~fl~rav~~l~~~~g~~q~LDLGcG~pT~ 92 (277)
T 3giw_A 18 DTESAHSARIYDYIIGGK---DYYPADKEAGDAMSRE--WPALPVHMRANRDWMNRAVAHLAKEAGIRQFLDIGTGIPTS 92 (277)
T ss_dssp CTTSCCHHHHHHHHTTCS---CCCHHHHHHHHHHHHH--CTTHHHHHHHHHHHHHHHHHHHHHTSCCCEEEEESCCSCCS
T ss_pred CCCCCCcchhheeecCCc---cCCHHHHHHHHHHHHh--CCCHHHHHHHHHHHHHHHHHHhccccCCCEEEEeCCCCCcc
Confidence 345678899999998521 222333433222 222 2211 112233445544333 34567999999997 4
Q ss_pred HHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCcee-----EEEEcCC-
Q 025824 92 YSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFD-----FIFVDAD- 165 (247)
Q Consensus 92 ~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~fD-----~v~id~~- 165 (247)
..+..++....++++|+++|.|+.+++.|++.+...+ ..+++++++|+.+.-..+... ...+.|| .|++.+.
T Consensus 93 ~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~-~~~~~~v~aD~~~~~~~l~~~-~~~~~~D~~~p~av~~~avL 170 (277)
T 3giw_A 93 PNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTP-EGRTAYVEADMLDPASILDAP-ELRDTLDLTRPVALTVIAIV 170 (277)
T ss_dssp SCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCS-SSEEEEEECCTTCHHHHHTCH-HHHTTCCTTSCCEEEEESCG
T ss_pred cHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCC-CCcEEEEEecccChhhhhccc-ccccccCcCCcchHHhhhhH
Confidence 4556666554348999999999999999999886543 257999999997642111000 0013354 3555543
Q ss_pred ---cc--chHHHHHHHHhcCCCCeEEEEeccc
Q 025824 166 ---KD--NYLNYHKRLIELVKVGGVIGYDNTL 192 (247)
Q Consensus 166 ---~~--~~~~~l~~~~~~L~~gG~lv~d~~~ 192 (247)
.. .....+..+.+.|+|||+|++....
T Consensus 171 H~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~ 202 (277)
T 3giw_A 171 HFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGT 202 (277)
T ss_dssp GGSCGGGCHHHHHHHHHTTSCTTCEEEEEEEC
T ss_pred hcCCchhhHHHHHHHHHHhCCCCcEEEEEecc
Confidence 11 2457899999999999999987654
No 231
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.23 E-value=4.7e-11 Score=95.19 Aligned_cols=99 Identities=18% Similarity=0.190 Sum_probs=71.6
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCC-CCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhh------------
Q 025824 78 VNAKNTMEIGVYTGYSLLATALALPD-DGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVL------------ 144 (247)
Q Consensus 78 ~~~~~vLEiG~g~G~st~~la~~~~~-~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l------------ 144 (247)
.+..+|||+|||+|..+..+++..++ +++|+++|+++.. .. .+++++++|+.+..
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~-----------~~-~~v~~~~~d~~~~~~~~~~~~~~i~~ 88 (201)
T 2plw_A 21 KKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD-----------PI-PNVYFIQGEIGKDNMNNIKNINYIDN 88 (201)
T ss_dssp CTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC-----------CC-TTCEEEECCTTTTSSCCC--------
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC-----------CC-CCceEEEccccchhhhhhcccccccc
Confidence 34578999999999999999998864 6899999999942 12 46899999987642
Q ss_pred -------HHHHhhhcCCCceeEEEEcCCccc-------h-------HHHHHHHHhcCCCCeEEEEe
Q 025824 145 -------DLLIQDEKNHGSFDFIFVDADKDN-------Y-------LNYHKRLIELVKVGGVIGYD 189 (247)
Q Consensus 145 -------~~l~~~~~~~~~fD~v~id~~~~~-------~-------~~~l~~~~~~L~~gG~lv~d 189 (247)
..+... ...++||+|+++..... . ...++.+.+.|+|||.+++.
T Consensus 89 ~~~~~~~~~~~~~-~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~ 153 (201)
T 2plw_A 89 MNNNSVDYKLKEI-LQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVK 153 (201)
T ss_dssp ---CHHHHHHHHH-HTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccchhhHHHHHhh-cCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEE
Confidence 000000 02468999999864211 1 12677788999999999984
No 232
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=99.22 E-value=1e-10 Score=101.77 Aligned_cols=126 Identities=11% Similarity=0.058 Sum_probs=98.2
Q ss_pred HHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCC-----CcEEEEEecc
Q 025824 66 DEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVA-----HKIDFREGPA 140 (247)
Q Consensus 66 ~~~~~l~~l~~~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~-----~~i~~~~gd~ 140 (247)
....+...++...+..+|||+++|.|.-|..|++.++ ++.|+++|+++..++..++++++.+.. .++.+...|+
T Consensus 135 ~aS~l~~~~L~~~pg~~VLD~CAaPGGKT~~la~~~~-~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~ 213 (359)
T 4fzv_A 135 AASLLPVLALGLQPGDIVLDLCAAPGGKTLALLQTGC-CRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDG 213 (359)
T ss_dssp GGGHHHHHHHCCCTTEEEEESSCTTCHHHHHHHHTTC-EEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCG
T ss_pred HHHHHHHHHhCCCCCCEEEEecCCccHHHHHHHHhcC-CCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCch
Confidence 3455556666666778999999999999999998765 679999999999999999999988753 4788999998
Q ss_pred hhhhHHHHhhhcCCCceeEEEEcCCccch---------------------------HHHHHHHHhcCCCCeEEEEecccc
Q 025824 141 LPVLDLLIQDEKNHGSFDFIFVDADKDNY---------------------------LNYHKRLIELVKVGGVIGYDNTLW 193 (247)
Q Consensus 141 ~~~l~~l~~~~~~~~~fD~v~id~~~~~~---------------------------~~~l~~~~~~L~~gG~lv~d~~~~ 193 (247)
...... ..+.||.|++|++++.. ..++..+.++|||||+|| |
T Consensus 214 ~~~~~~------~~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LV-----Y 282 (359)
T 4fzv_A 214 RKWGEL------EGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVV-----Y 282 (359)
T ss_dssp GGHHHH------STTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEE-----E
T ss_pred hhcchh------ccccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEE-----E
Confidence 765332 25789999999874331 245666778999999998 5
Q ss_pred cccccCCCCC
Q 025824 194 NGSVVAPPDA 203 (247)
Q Consensus 194 ~g~~~~~~~~ 203 (247)
+.+...+.++
T Consensus 283 sTCSl~~~EN 292 (359)
T 4fzv_A 283 STCSLSHLQN 292 (359)
T ss_dssp EESCCCTTTT
T ss_pred EeCCCchhhC
Confidence 6666667665
No 233
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.21 E-value=2.6e-11 Score=102.42 Aligned_cols=110 Identities=13% Similarity=-0.008 Sum_probs=75.7
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHc-----------------CCC-----------
Q 025824 79 NAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKA-----------------GVA----------- 130 (247)
Q Consensus 79 ~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~-----------------g~~----------- 130 (247)
++.+|||||||+|..+..++. .+ ..+|+++|+++.+++.|++++... +..
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~-~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 148 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSAC-SH-FEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLR 148 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGG-GG-CSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHH
T ss_pred CCCeEEEECCCcChHHHHhhc-cC-CCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHH
Confidence 568999999999995443333 22 569999999999999998866431 100
Q ss_pred -CcEEEEEecchhhhHHHHhhhcCCCceeEEEEcCCc-------cchHHHHHHHHhcCCCCeEEEEecc
Q 025824 131 -HKIDFREGPALPVLDLLIQDEKNHGSFDFIFVDADK-------DNYLNYHKRLIELVKVGGVIGYDNT 191 (247)
Q Consensus 131 -~~i~~~~gd~~~~l~~l~~~~~~~~~fD~v~id~~~-------~~~~~~l~~~~~~L~~gG~lv~d~~ 191 (247)
..++++.+|+.+.++.- ......++||+|++...- .+....++.+.++|||||.+++...
T Consensus 149 ~~~~~~~~~D~~~~~~~~-~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~ 216 (289)
T 2g72_A 149 ARVKRVLPIDVHQPQPLG-AGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGA 216 (289)
T ss_dssp HHEEEEECCCTTSSSTTC-SSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred hhhceEEecccCCCCCcc-ccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 02567777886533210 000013579999987652 2467889999999999999998653
No 234
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.21 E-value=4.2e-11 Score=103.96 Aligned_cols=116 Identities=16% Similarity=0.112 Sum_probs=89.7
Q ss_pred cCHHHHHHHHHHHh----hcCCCEEEEEcccccHHHHHHHhhCCCC----CEEEEEeCCcchHHHHHHHHHHcCCCCcEE
Q 025824 63 TSADEGQFLNMLLK----LVNAKNTMEIGVYTGYSLLATALALPDD----GKILAMDINRENYELGLPVIQKAGVAHKID 134 (247)
Q Consensus 63 ~~~~~~~~l~~l~~----~~~~~~vLEiG~g~G~st~~la~~~~~~----~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~ 134 (247)
.+.....++..++. ..+..+|||+|||+|..++.+++.++.. .+++++|+++.+++.|+.++...|+ +++
T Consensus 110 TP~~i~~~~~~ll~~l~~~~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~--~~~ 187 (344)
T 2f8l_A 110 TPDSIGFIVAYLLEKVIQKKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQ--KMT 187 (344)
T ss_dssp CCHHHHHHHHHHHHHHHTTCSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTC--CCE
T ss_pred ChHHHHHHHHHHHHHhcCCCCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCC--Cce
Confidence 34555555555543 2245689999999999999998887532 7999999999999999999998887 589
Q ss_pred EEEecchhhhHHHHhhhcCCCceeEEEEcCCccc---------------------hHHHHHHHHhcCCCCeEEEE
Q 025824 135 FREGPALPVLDLLIQDEKNHGSFDFIFVDADKDN---------------------YLNYHKRLIELVKVGGVIGY 188 (247)
Q Consensus 135 ~~~gd~~~~l~~l~~~~~~~~~fD~v~id~~~~~---------------------~~~~l~~~~~~L~~gG~lv~ 188 (247)
++++|+.+... .++||+|+.+.+... +..++..+.+.|+|||.+++
T Consensus 188 i~~~D~l~~~~--------~~~fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~ 254 (344)
T 2f8l_A 188 LLHQDGLANLL--------VDPVDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFF 254 (344)
T ss_dssp EEESCTTSCCC--------CCCEEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEE
T ss_pred EEECCCCCccc--------cCCccEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEE
Confidence 99999876421 468999999876211 12578889999999998876
No 235
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.19 E-value=9e-12 Score=104.10 Aligned_cols=110 Identities=17% Similarity=0.038 Sum_probs=77.4
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCC----------------------------
Q 025824 78 VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGV---------------------------- 129 (247)
Q Consensus 78 ~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~---------------------------- 129 (247)
.+..+|||||||+|..+..++... ..+|+++|+++.+++.|+++++....
T Consensus 54 ~~g~~vLDiGCG~G~~~~~~~~~~--~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~ 131 (263)
T 2a14_A 54 LQGDTLIDIGSGPTIYQVLAACDS--FQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKL 131 (263)
T ss_dssp CCEEEEEESSCTTCCGGGTTGGGT--EEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHH
T ss_pred CCCceEEEeCCCccHHHHHHHHhh--hcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHH
Confidence 345789999999997766555331 24799999999999999998765320
Q ss_pred CCcEE-EEEecchhhhHHHHhhhcCCCceeEEEEcCC-------ccchHHHHHHHHhcCCCCeEEEEeccc
Q 025824 130 AHKID-FREGPALPVLDLLIQDEKNHGSFDFIFVDAD-------KDNYLNYHKRLIELVKVGGVIGYDNTL 192 (247)
Q Consensus 130 ~~~i~-~~~gd~~~~l~~l~~~~~~~~~fD~v~id~~-------~~~~~~~l~~~~~~L~~gG~lv~d~~~ 192 (247)
..+++ ++++|..+..+.. .. ..++||+|+.... ...+...+..+.++|||||.+++....
T Consensus 132 ~~~i~~~~~~D~~~~~~~~-~~--~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~ 199 (263)
T 2a14_A 132 RAAVKRVLKCDVHLGNPLA-PA--VLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTL 199 (263)
T ss_dssp HHHEEEEEECCTTSSSTTT-TC--CCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEES
T ss_pred HhhhheEEeccccCCCCCC-cc--ccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEee
Confidence 01244 8889887632210 00 1468999998643 234567888899999999999997643
No 236
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.19 E-value=4.5e-11 Score=96.86 Aligned_cols=100 Identities=21% Similarity=0.218 Sum_probs=78.4
Q ss_pred HHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHh
Q 025824 70 FLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQ 149 (247)
Q Consensus 70 ~l~~l~~~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~ 149 (247)
.+..+....++.+|||+|||+|..+..++.. +++|+++.+++.++++ +++++.+|+.+. + +
T Consensus 38 ~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~-------~~vD~s~~~~~~a~~~--------~~~~~~~d~~~~-~-~-- 98 (219)
T 1vlm_A 38 ELQAVKCLLPEGRGVEIGVGTGRFAVPLKIK-------IGVEPSERMAEIARKR--------GVFVLKGTAENL-P-L-- 98 (219)
T ss_dssp HHHHHHHHCCSSCEEEETCTTSTTHHHHTCC-------EEEESCHHHHHHHHHT--------TCEEEECBTTBC-C-S--
T ss_pred HHHHHHHhCCCCcEEEeCCCCCHHHHHHHHH-------hccCCCHHHHHHHHhc--------CCEEEEcccccC-C-C--
Confidence 3444445556889999999999998887642 9999999999998876 478999998653 2 1
Q ss_pred hhcCCCceeEEEEcCC---ccchHHHHHHHHhcCCCCeEEEEecc
Q 025824 150 DEKNHGSFDFIFVDAD---KDNYLNYHKRLIELVKVGGVIGYDNT 191 (247)
Q Consensus 150 ~~~~~~~fD~v~id~~---~~~~~~~l~~~~~~L~~gG~lv~d~~ 191 (247)
..++||+|++... ..+....++.+.+.|+|||.+++...
T Consensus 99 ---~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 140 (219)
T 1vlm_A 99 ---KDESFDFALMVTTICFVDDPERALKEAYRILKKGGYLIVGIV 140 (219)
T ss_dssp ---CTTCEEEEEEESCGGGSSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ---CCCCeeEEEEcchHhhccCHHHHHHHHHHHcCCCcEEEEEEe
Confidence 2468999998765 23567889999999999999998644
No 237
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.19 E-value=8.4e-11 Score=93.74 Aligned_cols=97 Identities=14% Similarity=0.136 Sum_probs=69.5
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhh--HHHHhhhc--C
Q 025824 78 VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVL--DLLIQDEK--N 153 (247)
Q Consensus 78 ~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l--~~l~~~~~--~ 153 (247)
.+..+|||+|||+|..+..+++. +++|+++|+++.. .. .+++++++|+.+.. ..+...-. .
T Consensus 24 ~~g~~VLDlG~G~G~~s~~la~~---~~~V~gvD~~~~~-----------~~-~~v~~~~~D~~~~~~~~~~~~~~~~~~ 88 (191)
T 3dou_A 24 RKGDAVIEIGSSPGGWTQVLNSL---ARKIISIDLQEME-----------EI-AGVRFIRCDIFKETIFDDIDRALREEG 88 (191)
T ss_dssp CTTCEEEEESCTTCHHHHHHTTT---CSEEEEEESSCCC-----------CC-TTCEEEECCTTSSSHHHHHHHHHHHHT
T ss_pred CCCCEEEEEeecCCHHHHHHHHc---CCcEEEEeccccc-----------cC-CCeEEEEccccCHHHHHHHHHHhhccc
Confidence 45689999999999999999876 6899999999862 12 46999999987531 11110000 0
Q ss_pred CCceeEEEEcCCcc--c------------hHHHHHHHHhcCCCCeEEEEe
Q 025824 154 HGSFDFIFVDADKD--N------------YLNYHKRLIELVKVGGVIGYD 189 (247)
Q Consensus 154 ~~~fD~v~id~~~~--~------------~~~~l~~~~~~L~~gG~lv~d 189 (247)
.++||+|+.|.... . ....++.+.++|+|||.+++.
T Consensus 89 ~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k 138 (191)
T 3dou_A 89 IEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLK 138 (191)
T ss_dssp CSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEE
Confidence 14899999986421 0 134566778999999999974
No 238
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.19 E-value=1.4e-10 Score=100.75 Aligned_cols=104 Identities=13% Similarity=0.060 Sum_probs=79.7
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCce
Q 025824 78 VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSF 157 (247)
Q Consensus 78 ~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~f 157 (247)
.+..+|||||||+|..+..+++..| +.+++++|+ +..+. ++.+...+..++++++.+|+.+.+ . +|
T Consensus 183 ~~~~~vLDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~--~~~~~~~~~~~~v~~~~~d~~~~~---------p-~~ 248 (348)
T 3lst_A 183 PATGTVADVGGGRGGFLLTVLREHP-GLQGVLLDR-AEVVA--RHRLDAPDVAGRWKVVEGDFLREV---------P-HA 248 (348)
T ss_dssp CSSEEEEEETCTTSHHHHHHHHHCT-TEEEEEEEC-HHHHT--TCCCCCGGGTTSEEEEECCTTTCC---------C-CC
T ss_pred cCCceEEEECCccCHHHHHHHHHCC-CCEEEEecC-HHHhh--cccccccCCCCCeEEEecCCCCCC---------C-CC
Confidence 3567999999999999999999987 789999999 44433 333444556678999999986321 3 89
Q ss_pred eEEEEcCCc-----cchHHHHHHHHhcCCCCeEEEEecccccc
Q 025824 158 DFIFVDADK-----DNYLNYHKRLIELVKVGGVIGYDNTLWNG 195 (247)
Q Consensus 158 D~v~id~~~-----~~~~~~l~~~~~~L~~gG~lv~d~~~~~g 195 (247)
|+|++...- ......++.+.+.|+|||.+++.+...+.
T Consensus 249 D~v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~ 291 (348)
T 3lst_A 249 DVHVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDAVVPE 291 (348)
T ss_dssp SEEEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEECCBCS
T ss_pred cEEEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCC
Confidence 999986542 22357899999999999999987766543
No 239
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.18 E-value=3.1e-11 Score=97.78 Aligned_cols=97 Identities=14% Similarity=0.061 Sum_probs=76.5
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCce
Q 025824 78 VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSF 157 (247)
Q Consensus 78 ~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~f 157 (247)
.++.+|||+|||+|..+..+++. +.+++++|+++.+++.+++++ .+++.+|+.+....+ ..++|
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~---~~~~~~~D~~~~~~~~~~~~~--------~~~~~~d~~~~~~~~-----~~~~f 94 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKEN---GTRVSGIEAFPEAAEQAKEKL--------DHVVLGDIETMDMPY-----EEEQF 94 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTT---TCEEEEEESSHHHHHHHHTTS--------SEEEESCTTTCCCCS-----CTTCE
T ss_pred cCCCcEEEeCCCCCHHHHHHHhc---CCeEEEEeCCHHHHHHHHHhC--------CcEEEcchhhcCCCC-----CCCcc
Confidence 46789999999999999999886 379999999999988887643 267888886531111 24789
Q ss_pred eEEEEcCC---ccchHHHHHHHHhcCCCCeEEEEec
Q 025824 158 DFIFVDAD---KDNYLNYHKRLIELVKVGGVIGYDN 190 (247)
Q Consensus 158 D~v~id~~---~~~~~~~l~~~~~~L~~gG~lv~d~ 190 (247)
|+|++... ..+....++.+.+.|+|||.+++..
T Consensus 95 D~v~~~~~l~~~~~~~~~l~~~~~~L~~gG~l~~~~ 130 (230)
T 3cc8_A 95 DCVIFGDVLEHLFDPWAVIEKVKPYIKQNGVILASI 130 (230)
T ss_dssp EEEEEESCGGGSSCHHHHHHHTGGGEEEEEEEEEEE
T ss_pred CEEEECChhhhcCCHHHHHHHHHHHcCCCCEEEEEe
Confidence 99998755 2345788899999999999999854
No 240
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.17 E-value=1.5e-10 Score=98.65 Aligned_cols=92 Identities=16% Similarity=0.147 Sum_probs=70.4
Q ss_pred CHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhh
Q 025824 64 SADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPV 143 (247)
Q Consensus 64 ~~~~~~~l~~l~~~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~ 143 (247)
.+.....+...+...+..+|||||||+|..+..+++. +++|+++|+++.+++.+++++...+. ++++++++|+.+.
T Consensus 27 ~~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~La~~---~~~v~~vDi~~~~~~~a~~~~~~~~~-~~v~~~~~D~~~~ 102 (299)
T 2h1r_A 27 NPGILDKIIYAAKIKSSDIVLEIGCGTGNLTVKLLPL---AKKVITIDIDSRMISEVKKRCLYEGY-NNLEVYEGDAIKT 102 (299)
T ss_dssp CHHHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHTTT---SSEEEEECSCHHHHHHHHHHHHHTTC-CCEEC----CCSS
T ss_pred CHHHHHHHHHhcCCCCcCEEEEEcCcCcHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHHcCC-CceEEEECchhhC
Confidence 4555555555555566789999999999999999875 57999999999999999999987776 6799999999764
Q ss_pred hHHHHhhhcCCCceeEEEEcCCccc
Q 025824 144 LDLLIQDEKNHGSFDFIFVDADKDN 168 (247)
Q Consensus 144 l~~l~~~~~~~~~fD~v~id~~~~~ 168 (247)
. .++||+|+++.+...
T Consensus 103 ~---------~~~~D~Vv~n~py~~ 118 (299)
T 2h1r_A 103 V---------FPKFDVCTANIPYKI 118 (299)
T ss_dssp C---------CCCCSEEEEECCGGG
T ss_pred C---------cccCCEEEEcCCccc
Confidence 2 358999999887433
No 241
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.17 E-value=1.1e-11 Score=101.95 Aligned_cols=97 Identities=15% Similarity=0.134 Sum_probs=66.9
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEe-cchhhh-HHHHhhhcCCCc
Q 025824 79 NAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREG-PALPVL-DLLIQDEKNHGS 156 (247)
Q Consensus 79 ~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~g-d~~~~l-~~l~~~~~~~~~ 156 (247)
+.++|||||||+|..+..+++. + ..+|+++|+++.+++.|+++.. ++..... +..... ..+ ....
T Consensus 37 ~g~~VLDiGcGtG~~t~~la~~-g-~~~V~gvDis~~ml~~a~~~~~------~~~~~~~~~~~~~~~~~~-----~~~~ 103 (232)
T 3opn_A 37 NGKTCLDIGSSTGGFTDVMLQN-G-AKLVYALDVGTNQLAWKIRSDE------RVVVMEQFNFRNAVLADF-----EQGR 103 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-T-CSEEEEECSSCCCCCHHHHTCT------TEEEECSCCGGGCCGGGC-----CSCC
T ss_pred CCCEEEEEccCCCHHHHHHHhc-C-CCEEEEEcCCHHHHHHHHHhCc------cccccccceEEEeCHhHc-----CcCC
Confidence 4569999999999999999986 2 3599999999999988766432 2322211 221111 111 1123
Q ss_pred eeEEEEcCCccchHHHHHHHHhcCCCCeEEEE
Q 025824 157 FDFIFVDADKDNYLNYHKRLIELVKVGGVIGY 188 (247)
Q Consensus 157 fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv~ 188 (247)
||.+.+|.........+..+.+.|+|||.+++
T Consensus 104 ~d~~~~D~v~~~l~~~l~~i~rvLkpgG~lv~ 135 (232)
T 3opn_A 104 PSFTSIDVSFISLDLILPPLYEILEKNGEVAA 135 (232)
T ss_dssp CSEEEECCSSSCGGGTHHHHHHHSCTTCEEEE
T ss_pred CCEEEEEEEhhhHHHHHHHHHHhccCCCEEEE
Confidence 56666666555567889999999999999987
No 242
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.15 E-value=1.9e-10 Score=100.71 Aligned_cols=97 Identities=12% Similarity=0.101 Sum_probs=76.9
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCcee
Q 025824 79 NAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFD 158 (247)
Q Consensus 79 ~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~fD 158 (247)
+..+|||||||+|..+..+++..| +.+++++|+ +.+++.+++ .++++++.+|+.+.++ .. |
T Consensus 203 ~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~-------~~~v~~~~~d~~~~~p---------~~-D 263 (368)
T 3reo_A 203 GLTTIVDVGGGTGAVASMIVAKYP-SINAINFDL-PHVIQDAPA-------FSGVEHLGGDMFDGVP---------KG-D 263 (368)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHTTCCC-------CTTEEEEECCTTTCCC---------CC-S
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCC-CCEEEEEeh-HHHHHhhhh-------cCCCEEEecCCCCCCC---------CC-C
Confidence 357999999999999999999987 789999999 877766543 2579999999876322 23 9
Q ss_pred EEEEcCCc-----cchHHHHHHHHhcCCCCeEEEEeccccc
Q 025824 159 FIFVDADK-----DNYLNYHKRLIELVKVGGVIGYDNTLWN 194 (247)
Q Consensus 159 ~v~id~~~-----~~~~~~l~~~~~~L~~gG~lv~d~~~~~ 194 (247)
+|++...- ......++.+.+.|+|||.|++.+...+
T Consensus 264 ~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 304 (368)
T 3reo_A 264 AIFIKWICHDWSDEHCLKLLKNCYAALPDHGKVIVAEYILP 304 (368)
T ss_dssp EEEEESCGGGBCHHHHHHHHHHHHHHSCTTCEEEEEECCCC
T ss_pred EEEEechhhcCCHHHHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 99886542 2335788999999999999998777654
No 243
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=99.15 E-value=3e-11 Score=100.90 Aligned_cols=91 Identities=13% Similarity=0.180 Sum_probs=73.3
Q ss_pred HHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCc-------chHHHHHHHHHHcCCCCcEEEEEecch
Q 025824 69 QFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINR-------ENYELGLPVIQKAGVAHKIDFREGPAL 141 (247)
Q Consensus 69 ~~l~~l~~~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~-------~~~~~a~~~~~~~g~~~~i~~~~gd~~ 141 (247)
.++...+...+..+|||+|||+|..++.+++. +++|+++|+++ ++++.|+++++..++.++++++++|+.
T Consensus 73 ~~l~~a~~~~~~~~VLDlgcG~G~~a~~lA~~---g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~ 149 (258)
T 2r6z_A 73 ELIAKAVNHTAHPTVWDATAGLGRDSFVLASL---GLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAA 149 (258)
T ss_dssp CHHHHHTTGGGCCCEEETTCTTCHHHHHHHHT---TCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHH
T ss_pred HHHHHHhCcCCcCeEEEeeCccCHHHHHHHHh---CCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHH
Confidence 34444444445679999999999999999985 57999999999 999999999888777667999999998
Q ss_pred hhhHHHHhhhcCCCceeEEEEcCC
Q 025824 142 PVLDLLIQDEKNHGSFDFIFVDAD 165 (247)
Q Consensus 142 ~~l~~l~~~~~~~~~fD~v~id~~ 165 (247)
+.++.+... .++||+|++|..
T Consensus 150 ~~l~~~~~~---~~~fD~V~~dP~ 170 (258)
T 2r6z_A 150 EQMPALVKT---QGKPDIVYLDPM 170 (258)
T ss_dssp HHHHHHHHH---HCCCSEEEECCC
T ss_pred HHHHhhhcc---CCCccEEEECCC
Confidence 877655211 168999999975
No 244
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.14 E-value=1.7e-10 Score=91.44 Aligned_cols=101 Identities=13% Similarity=0.102 Sum_probs=71.5
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCC--------CEEEEEeCCcchHHHHHHHHHHcCCCCcEEEE-EecchhhhHH-H
Q 025824 78 VNAKNTMEIGVYTGYSLLATALALPDD--------GKILAMDINRENYELGLPVIQKAGVAHKIDFR-EGPALPVLDL-L 147 (247)
Q Consensus 78 ~~~~~vLEiG~g~G~st~~la~~~~~~--------~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~-~gd~~~~l~~-l 147 (247)
.+..+|||+|||+|..+..+++.++.. ++|+++|+++.. .. .+++++ .+|..+.... .
T Consensus 21 ~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-----------~~-~~~~~~~~~d~~~~~~~~~ 88 (196)
T 2nyu_A 21 RPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-----------PL-EGATFLCPADVTDPRTSQR 88 (196)
T ss_dssp CTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-----------CC-TTCEEECSCCTTSHHHHHH
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-----------cC-CCCeEEEeccCCCHHHHHH
Confidence 456799999999999999999987633 899999999952 12 468888 8887543111 0
Q ss_pred HhhhcCCCceeEEEEcCCcc-------ch-------HHHHHHHHhcCCCCeEEEEec
Q 025824 148 IQDEKNHGSFDFIFVDADKD-------NY-------LNYHKRLIELVKVGGVIGYDN 190 (247)
Q Consensus 148 ~~~~~~~~~fD~v~id~~~~-------~~-------~~~l~~~~~~L~~gG~lv~d~ 190 (247)
.......++||+|+++.... +. ...++.+.+.|+|||.+++..
T Consensus 89 ~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~ 145 (196)
T 2nyu_A 89 ILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKT 145 (196)
T ss_dssp HHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEe
Confidence 00000135899999876311 11 367888899999999999853
No 245
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.13 E-value=1.9e-11 Score=103.40 Aligned_cols=97 Identities=15% Similarity=0.051 Sum_probs=71.3
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEE-ecchhhhH-HHHhhhcCCCc
Q 025824 79 NAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFRE-GPALPVLD-LLIQDEKNHGS 156 (247)
Q Consensus 79 ~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~-gd~~~~l~-~l~~~~~~~~~ 156 (247)
+..+|||+|||+|..+..+++. + .++|+++|+++.+++.+.+. ..++.... .++...-. .+ +..+
T Consensus 85 ~g~~vLDiGcGTG~~t~~L~~~-g-a~~V~aVDvs~~mL~~a~r~------~~rv~~~~~~ni~~l~~~~l-----~~~~ 151 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVMLQN-G-AKLVYAVDVGTNQLVWKLRQ------DDRVRSMEQYNFRYAEPVDF-----TEGL 151 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-T-CSEEEEECSSSSCSCHHHHT------CTTEEEECSCCGGGCCGGGC-----TTCC
T ss_pred cccEEEecCCCccHHHHHHHhC-C-CCEEEEEECCHHHHHHHHHh------CcccceecccCceecchhhC-----CCCC
Confidence 4569999999999999998875 2 46999999999999875432 12443332 33322211 11 1245
Q ss_pred eeEEEEcCCccchHHHHHHHHhcCCCCeEEEE
Q 025824 157 FDFIFVDADKDNYLNYHKRLIELVKVGGVIGY 188 (247)
Q Consensus 157 fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv~ 188 (247)
||+|++|..-.+....+..+.++|+|||.+++
T Consensus 152 fD~v~~d~sf~sl~~vL~e~~rvLkpGG~lv~ 183 (291)
T 3hp7_A 152 PSFASIDVSFISLNLILPALAKILVDGGQVVA 183 (291)
T ss_dssp CSEEEECCSSSCGGGTHHHHHHHSCTTCEEEE
T ss_pred CCEEEEEeeHhhHHHHHHHHHHHcCcCCEEEE
Confidence 99999998766778899999999999999987
No 246
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.12 E-value=3e-10 Score=99.31 Aligned_cols=97 Identities=12% Similarity=0.087 Sum_probs=77.3
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCcee
Q 025824 79 NAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFD 158 (247)
Q Consensus 79 ~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~fD 158 (247)
+..+|||||||+|..+..+++..| +.+++++|+ +.+++.|++ .++++++.+|+.+.++ . . |
T Consensus 201 ~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~-------~~~v~~~~~D~~~~~p--------~-~-D 261 (364)
T 3p9c_A 201 GLGTLVDVGGGVGATVAAIAAHYP-TIKGVNFDL-PHVISEAPQ-------FPGVTHVGGDMFKEVP--------S-G-D 261 (364)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHTTCCC-------CTTEEEEECCTTTCCC--------C-C-S
T ss_pred CCCEEEEeCCCCCHHHHHHHHHCC-CCeEEEecC-HHHHHhhhh-------cCCeEEEeCCcCCCCC--------C-C-C
Confidence 467999999999999999999987 789999999 877666543 2579999999876322 2 3 9
Q ss_pred EEEEcCCc-----cchHHHHHHHHhcCCCCeEEEEeccccc
Q 025824 159 FIFVDADK-----DNYLNYHKRLIELVKVGGVIGYDNTLWN 194 (247)
Q Consensus 159 ~v~id~~~-----~~~~~~l~~~~~~L~~gG~lv~d~~~~~ 194 (247)
+|++.... ......++.+.+.|+|||.+++.+...+
T Consensus 262 ~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~ 302 (364)
T 3p9c_A 262 TILMKWILHDWSDQHCATLLKNCYDALPAHGKVVLVQCILP 302 (364)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEECCBC
T ss_pred EEEehHHhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 99986542 3345789999999999999998777654
No 247
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.12 E-value=4.1e-11 Score=106.42 Aligned_cols=99 Identities=16% Similarity=0.165 Sum_probs=73.0
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCcee
Q 025824 79 NAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFD 158 (247)
Q Consensus 79 ~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~fD 158 (247)
+..+|||||||+|..+..+++. +.+++++|+++.+++.|++. +......+...+..+.++.. +++||
T Consensus 107 ~~~~VLDiGcG~G~~~~~l~~~---g~~v~gvD~s~~~~~~a~~~----~~~~~~~~~~~~~~~~l~~~------~~~fD 173 (416)
T 4e2x_A 107 PDPFIVEIGCNDGIMLRTIQEA---GVRHLGFEPSSGVAAKAREK----GIRVRTDFFEKATADDVRRT------EGPAN 173 (416)
T ss_dssp SSCEEEEETCTTTTTHHHHHHT---TCEEEEECCCHHHHHHHHTT----TCCEECSCCSHHHHHHHHHH------HCCEE
T ss_pred CCCEEEEecCCCCHHHHHHHHc---CCcEEEECCCHHHHHHHHHc----CCCcceeeechhhHhhcccC------CCCEE
Confidence 5679999999999999999875 56999999999999988765 43221111212222222211 47999
Q ss_pred EEEEcCC---ccchHHHHHHHHhcCCCCeEEEEec
Q 025824 159 FIFVDAD---KDNYLNYHKRLIELVKVGGVIGYDN 190 (247)
Q Consensus 159 ~v~id~~---~~~~~~~l~~~~~~L~~gG~lv~d~ 190 (247)
+|++... ..+...+++.+.++|+|||++++..
T Consensus 174 ~I~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~ 208 (416)
T 4e2x_A 174 VIYAANTLCHIPYVQSVLEGVDALLAPDGVFVFED 208 (416)
T ss_dssp EEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEECChHHhcCCHHHHHHHHHHHcCCCeEEEEEe
Confidence 9998765 2356789999999999999999864
No 248
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.12 E-value=3.9e-10 Score=98.24 Aligned_cols=105 Identities=19% Similarity=0.127 Sum_probs=83.8
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCce
Q 025824 78 VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSF 157 (247)
Q Consensus 78 ~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~f 157 (247)
.+.++|||||||+|..+..+++..| +.+++..|. |+.++.|++++...+ .++|+++.+|..+.. ...+
T Consensus 178 ~~~~~v~DvGgG~G~~~~~l~~~~p-~~~~~~~dl-p~v~~~a~~~~~~~~-~~rv~~~~gD~~~~~---------~~~~ 245 (353)
T 4a6d_A 178 SVFPLMCDLGGGAGALAKECMSLYP-GCKITVFDI-PEVVWTAKQHFSFQE-EEQIDFQEGDFFKDP---------LPEA 245 (353)
T ss_dssp GGCSEEEEETCTTSHHHHHHHHHCS-SCEEEEEEC-HHHHHHHHHHSCC---CCSEEEEESCTTTSC---------CCCC
T ss_pred ccCCeEEeeCCCCCHHHHHHHHhCC-CceeEeccC-HHHHHHHHHhhhhcc-cCceeeecCccccCC---------CCCc
Confidence 3567999999999999999999998 789999998 888999999887554 579999999987531 3568
Q ss_pred eEEEEcCC-----ccchHHHHHHHHhcCCCCeEEEEeccccc
Q 025824 158 DFIFVDAD-----KDNYLNYHKRLIELVKVGGVIGYDNTLWN 194 (247)
Q Consensus 158 D~v~id~~-----~~~~~~~l~~~~~~L~~gG~lv~d~~~~~ 194 (247)
|++++-.. .+....+++.+.+.|+|||.+++.+.+.+
T Consensus 246 D~~~~~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~ 287 (353)
T 4a6d_A 246 DLYILARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLLD 287 (353)
T ss_dssp SEEEEESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEECCCC
T ss_pred eEEEeeeecccCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeC
Confidence 99987543 23345789999999999998888766543
No 249
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.12 E-value=6.7e-10 Score=91.83 Aligned_cols=114 Identities=10% Similarity=-0.023 Sum_probs=86.7
Q ss_pred HHHHHHHHHHhh-cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhh
Q 025824 66 DEGQFLNMLLKL-VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVL 144 (247)
Q Consensus 66 ~~~~~l~~l~~~-~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l 144 (247)
....|...+... ..|.+|||||||+|-.++.++...| ..+++++|+++.+++.+++++..+|+. .++.+.|.....
T Consensus 118 ~lD~fY~~i~~~i~~p~~VLDLGCG~GpLAl~~~~~~p-~a~y~a~DId~~~le~a~~~l~~~g~~--~~~~v~D~~~~~ 194 (281)
T 3lcv_B 118 HLDEFYRELFRHLPRPNTLRDLACGLNPLAAPWMGLPA-ETVYIASDIDARLVGFVDEALTRLNVP--HRTNVADLLEDR 194 (281)
T ss_dssp GHHHHHHHHGGGSCCCSEEEETTCTTGGGCCTTTTCCT-TCEEEEEESBHHHHHHHHHHHHHTTCC--EEEEECCTTTSC
T ss_pred hHHHHHHHHHhccCCCceeeeeccCccHHHHHHHhhCC-CCEEEEEeCCHHHHHHHHHHHHhcCCC--ceEEEeeecccC
Confidence 334444444443 4588999999999999998887655 899999999999999999999999874 788888876543
Q ss_pred HHHHhhhcCCCceeEEEEcCCc-----cchHHHHHHHHhcCCCCeEEEEecc
Q 025824 145 DLLIQDEKNHGSFDFIFVDADK-----DNYLNYHKRLIELVKVGGVIGYDNT 191 (247)
Q Consensus 145 ~~l~~~~~~~~~fD~v~id~~~-----~~~~~~l~~~~~~L~~gG~lv~d~~ 191 (247)
+ .++||++++--.. +.....+ .+...|+++|++|--+.
T Consensus 195 p--------~~~~DvaL~lkti~~Le~q~kg~g~-~ll~aL~~~~vvVSfp~ 237 (281)
T 3lcv_B 195 L--------DEPADVTLLLKTLPCLETQQRGSGW-EVIDIVNSPNIVVTFPT 237 (281)
T ss_dssp C--------CSCCSEEEETTCHHHHHHHSTTHHH-HHHHHSSCSEEEEEEEC
T ss_pred C--------CCCcchHHHHHHHHHhhhhhhHHHH-HHHHHhCCCCEEEeccc
Confidence 3 5799999875441 1112344 67789999999996544
No 250
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.11 E-value=1.4e-10 Score=102.99 Aligned_cols=108 Identities=19% Similarity=0.186 Sum_probs=82.0
Q ss_pred cCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchh
Q 025824 63 TSADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALP 142 (247)
Q Consensus 63 ~~~~~~~~l~~l~~~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~ 142 (247)
.++...+++..++...++.+|||+|||+|..++.+++..++..+++++|+++.+++.| .+++++++|..+
T Consensus 23 TP~~l~~~~~~~~~~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a----------~~~~~~~~D~~~ 92 (421)
T 2ih2_A 23 TPPEVVDFMVSLAEAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP----------PWAEGILADFLL 92 (421)
T ss_dssp CCHHHHHHHHHHCCCCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC----------TTEEEEESCGGG
T ss_pred CCHHHHHHHHHhhccCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC----------CCCcEEeCChhh
Confidence 3455566665555444567999999999999999998764468999999999988766 468999999876
Q ss_pred hhHHHHhhhcCCCceeEEEEcCCc--------------c------------------chHHHHHHHHhcCCCCeEEEE
Q 025824 143 VLDLLIQDEKNHGSFDFIFVDADK--------------D------------------NYLNYHKRLIELVKVGGVIGY 188 (247)
Q Consensus 143 ~l~~l~~~~~~~~~fD~v~id~~~--------------~------------------~~~~~l~~~~~~L~~gG~lv~ 188 (247)
..+ .++||+|+.+.+. . .+..+++.+.++|+|||.+++
T Consensus 93 ~~~--------~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~ 162 (421)
T 2ih2_A 93 WEP--------GEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVF 162 (421)
T ss_dssp CCC--------SSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEE
T ss_pred cCc--------cCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEE
Confidence 532 4689999997541 0 112567888899999999876
No 251
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=99.09 E-value=4.3e-10 Score=95.82 Aligned_cols=86 Identities=15% Similarity=0.095 Sum_probs=70.1
Q ss_pred hcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCc
Q 025824 77 LVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGS 156 (247)
Q Consensus 77 ~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~ 156 (247)
..+..+|||+|||+|..+..+++.++ +++|+++|+++++++.|++++...| ++++++++|+.+....+...+ .++
T Consensus 24 ~~~g~~vLD~g~G~G~~s~~la~~~~-~~~VigvD~d~~al~~A~~~~~~~g--~~v~~v~~d~~~l~~~l~~~g--~~~ 98 (301)
T 1m6y_A 24 PEDEKIILDCTVGEGGHSRAILEHCP-GCRIIGIDVDSEVLRIAEEKLKEFS--DRVSLFKVSYREADFLLKTLG--IEK 98 (301)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHTGGGT--TTEEEEECCGGGHHHHHHHTT--CSC
T ss_pred CCCCCEEEEEeCCcCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEECCHHHHHHHHHhcC--CCC
Confidence 34567999999999999999999987 7899999999999999999998877 589999999865422222111 258
Q ss_pred eeEEEEcCCcc
Q 025824 157 FDFIFVDADKD 167 (247)
Q Consensus 157 fD~v~id~~~~ 167 (247)
||.|++|....
T Consensus 99 ~D~Vl~D~gvS 109 (301)
T 1m6y_A 99 VDGILMDLGVS 109 (301)
T ss_dssp EEEEEEECSCC
T ss_pred CCEEEEcCccc
Confidence 99999998643
No 252
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=99.09 E-value=1.7e-10 Score=101.88 Aligned_cols=77 Identities=16% Similarity=0.143 Sum_probs=67.9
Q ss_pred CCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHc--CCCCcEEEEEecchhhhHHHHhhhcCCCce
Q 025824 80 AKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKA--GVAHKIDFREGPALPVLDLLIQDEKNHGSF 157 (247)
Q Consensus 80 ~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~--g~~~~i~~~~gd~~~~l~~l~~~~~~~~~f 157 (247)
..+|||+|||+|..++.+++. +.+|+++|+++.+++.|++|++.. |+ ++++++++|+.+.++.+. .++|
T Consensus 94 g~~VLDLgcG~G~~al~LA~~---g~~V~~VD~s~~~l~~Ar~N~~~~~~gl-~~i~~i~~Da~~~L~~~~-----~~~f 164 (410)
T 3ll7_A 94 GTKVVDLTGGLGIDFIALMSK---ASQGIYIERNDETAVAARHNIPLLLNEG-KDVNILTGDFKEYLPLIK-----TFHP 164 (410)
T ss_dssp TCEEEESSCSSSHHHHHHHTT---CSEEEEEESCHHHHHHHHHHHHHHSCTT-CEEEEEESCGGGSHHHHH-----HHCC
T ss_pred CCEEEEeCCCchHHHHHHHhc---CCEEEEEECCHHHHHHHHHhHHHhccCC-CcEEEEECcHHHhhhhcc-----CCCc
Confidence 689999999999999999875 579999999999999999999988 87 789999999998776531 3589
Q ss_pred eEEEEcCC
Q 025824 158 DFIFVDAD 165 (247)
Q Consensus 158 D~v~id~~ 165 (247)
|+||+|.+
T Consensus 165 DvV~lDPP 172 (410)
T 3ll7_A 165 DYIYVDPA 172 (410)
T ss_dssp SEEEECCE
T ss_pred eEEEECCC
Confidence 99999965
No 253
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.09 E-value=5.4e-10 Score=100.28 Aligned_cols=119 Identities=15% Similarity=0.083 Sum_probs=91.5
Q ss_pred ccCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCC------------CCCEEEEEeCCcchHHHHHHHHHHcCC
Q 025824 62 TTSADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALP------------DDGKILAMDINRENYELGLPVIQKAGV 129 (247)
Q Consensus 62 ~~~~~~~~~l~~l~~~~~~~~vLEiG~g~G~st~~la~~~~------------~~~~v~~iD~~~~~~~~a~~~~~~~g~ 129 (247)
..++...+++..++...+..+|||.|||+|...+.+++.+. ...+++|+|+++.+++.|+.++...|+
T Consensus 154 yTP~~v~~~mv~~l~~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~ 233 (445)
T 2okc_A 154 FTPRPLIQAMVDCINPQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGI 233 (445)
T ss_dssp CCCHHHHHHHHHHHCCCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTC
T ss_pred cCcHHHHHHHHHHhCCCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCC
Confidence 34456666666666555567999999999999998887641 136899999999999999999998887
Q ss_pred CC-cEEEEEecchhhhHHHHhhhcCCCceeEEEEcCCccc--------------------hHHHHHHHHhcCCCCeEEEE
Q 025824 130 AH-KIDFREGPALPVLDLLIQDEKNHGSFDFIFVDADKDN--------------------YLNYHKRLIELVKVGGVIGY 188 (247)
Q Consensus 130 ~~-~i~~~~gd~~~~l~~l~~~~~~~~~fD~v~id~~~~~--------------------~~~~l~~~~~~L~~gG~lv~ 188 (247)
.. +++++++|+..... ..+||+|+.+.+... ...++..+.++|+|||.+++
T Consensus 234 ~~~~~~i~~gD~l~~~~--------~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~ 305 (445)
T 2okc_A 234 GTDRSPIVCEDSLEKEP--------STLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAV 305 (445)
T ss_dssp CSSCCSEEECCTTTSCC--------SSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEE
T ss_pred CcCCCCEeeCCCCCCcc--------cCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEE
Confidence 53 67899999876422 358999999865111 14678999999999998864
No 254
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.08 E-value=1.4e-09 Score=92.29 Aligned_cols=104 Identities=14% Similarity=0.045 Sum_probs=75.4
Q ss_pred CCCCccccCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEE
Q 025824 56 HPWNIMTTSADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDF 135 (247)
Q Consensus 56 ~~~~~~~~~~~~~~~l~~l~~~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~ 135 (247)
.|..++ ..+.....+...+...+..+|||||||+|+.|..+++. +.+|+++|+++++++.+++++... +++++
T Consensus 28 ~GQnfL-~d~~i~~~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~---~~~V~aVEid~~li~~a~~~~~~~---~~v~v 100 (295)
T 3gru_A 28 LGQCFL-IDKNFVNKAVESANLTKDDVVLEIGLGKGILTEELAKN---AKKVYVIEIDKSLEPYANKLKELY---NNIEI 100 (295)
T ss_dssp --CCEE-CCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH---SSEEEEEESCGGGHHHHHHHHHHC---SSEEE
T ss_pred cCcccc-CCHHHHHHHHHhcCCCCcCEEEEECCCchHHHHHHHhc---CCEEEEEECCHHHHHHHHHHhccC---CCeEE
Confidence 444333 34544444444455556789999999999999999987 479999999999999999998732 47999
Q ss_pred EEecchhhhHHHHhhhcCCCceeEEEEcCCccchHHHH
Q 025824 136 REGPALPVLDLLIQDEKNHGSFDFIFVDADKDNYLNYH 173 (247)
Q Consensus 136 ~~gd~~~~l~~l~~~~~~~~~fD~v~id~~~~~~~~~l 173 (247)
+++|+.+... ...+||.|+.+.+..-..+.+
T Consensus 101 i~gD~l~~~~-------~~~~fD~Iv~NlPy~is~pil 131 (295)
T 3gru_A 101 IWGDALKVDL-------NKLDFNKVVANLPYQISSPIT 131 (295)
T ss_dssp EESCTTTSCG-------GGSCCSEEEEECCGGGHHHHH
T ss_pred EECchhhCCc-------ccCCccEEEEeCcccccHHHH
Confidence 9999987421 135799999887743333333
No 255
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.07 E-value=1.6e-10 Score=93.20 Aligned_cols=96 Identities=11% Similarity=0.076 Sum_probs=73.8
Q ss_pred HHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHH
Q 025824 67 EGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDL 146 (247)
Q Consensus 67 ~~~~l~~l~~~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~ 146 (247)
...++..+....++.+|||||||+|..+..++ .+++++|+++. +++++++|+.+. +
T Consensus 55 ~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~------~~v~~~D~s~~----------------~~~~~~~d~~~~-~- 110 (215)
T 2zfu_A 55 VDRIARDLRQRPASLVVADFGCGDCRLASSIR------NPVHCFDLASL----------------DPRVTVCDMAQV-P- 110 (215)
T ss_dssp HHHHHHHHHTSCTTSCEEEETCTTCHHHHHCC------SCEEEEESSCS----------------STTEEESCTTSC-S-
T ss_pred HHHHHHHHhccCCCCeEEEECCcCCHHHHHhh------ccEEEEeCCCC----------------CceEEEeccccC-C-
Confidence 34456655555567899999999999887762 58999999997 357888888663 2
Q ss_pred HHhhhcCCCceeEEEEcCC--ccchHHHHHHHHhcCCCCeEEEEecc
Q 025824 147 LIQDEKNHGSFDFIFVDAD--KDNYLNYHKRLIELVKVGGVIGYDNT 191 (247)
Q Consensus 147 l~~~~~~~~~fD~v~id~~--~~~~~~~l~~~~~~L~~gG~lv~d~~ 191 (247)
+ ..++||+|++... ..+....++.+.++|+|||.+++.+.
T Consensus 111 ~-----~~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~~gG~l~i~~~ 152 (215)
T 2zfu_A 111 L-----EDESVDVAVFCLSLMGTNIRDFLEEANRVLKPGGLLKVAEV 152 (215)
T ss_dssp C-----CTTCEEEEEEESCCCSSCHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred C-----CCCCEeEEEEehhccccCHHHHHHHHHHhCCCCeEEEEEEc
Confidence 1 2568999998654 34567889999999999999998654
No 256
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.07 E-value=4.6e-10 Score=99.10 Aligned_cols=93 Identities=15% Similarity=0.129 Sum_probs=72.6
Q ss_pred HHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCC---C----------------------------------CCEE
Q 025824 65 ADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALP---D----------------------------------DGKI 107 (247)
Q Consensus 65 ~~~~~~l~~l~~~~~~~~vLEiG~g~G~st~~la~~~~---~----------------------------------~~~v 107 (247)
+..+..+-.++...+...|||.+||+|..++..+.... + ..+|
T Consensus 187 e~lAa~ll~l~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V 266 (393)
T 3k0b_A 187 ETMAAALVLLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNI 266 (393)
T ss_dssp HHHHHHHHHHSCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCE
T ss_pred HHHHHHHHHHhCCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceE
Confidence 33333333344445567899999999999888775432 1 2579
Q ss_pred EEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCceeEEEEcCC
Q 025824 108 LAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDFIFVDAD 165 (247)
Q Consensus 108 ~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~fD~v~id~~ 165 (247)
+++|+++.+++.|++|+..+|+.++++++++|+.+... ..+||+|+++.+
T Consensus 267 ~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~--------~~~fD~Iv~NPP 316 (393)
T 3k0b_A 267 IGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQT--------EDEYGVVVANPP 316 (393)
T ss_dssp EEEESCHHHHHHHHHHHHHTTCTTCSEEEECCGGGCCC--------CCCSCEEEECCC
T ss_pred EEEECCHHHHHHHHHHHHHcCCCCceEEEECChHhCCC--------CCCCCEEEECCC
Confidence 99999999999999999999998889999999987532 358999999987
No 257
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=99.06 E-value=3.9e-11 Score=99.98 Aligned_cols=86 Identities=8% Similarity=0.093 Sum_probs=68.9
Q ss_pred HHHHHhhcCC--CEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcC--------CCCcEEEEEecc
Q 025824 71 LNMLLKLVNA--KNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAG--------VAHKIDFREGPA 140 (247)
Q Consensus 71 l~~l~~~~~~--~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g--------~~~~i~~~~gd~ 140 (247)
+...+...++ .+|||+|||+|..++.+++. +++|+++|+++..++.++++++.+. +.++++++++|+
T Consensus 78 l~~al~l~~g~~~~VLDl~~G~G~dal~lA~~---g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~ 154 (258)
T 2oyr_A 78 VAKAVGIKGDYLPDVVDATAGLGRDAFVLASV---GCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASS 154 (258)
T ss_dssp HHHHTTCBTTBCCCEEETTCTTCHHHHHHHHH---TCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCH
T ss_pred HHHHhcccCCCCCEEEEcCCcCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCH
Confidence 3334444455 79999999999999999986 5689999999999888888887542 225799999999
Q ss_pred hhhhHHHHhhhcCCCceeEEEEcCC
Q 025824 141 LPVLDLLIQDEKNHGSFDFIFVDAD 165 (247)
Q Consensus 141 ~~~l~~l~~~~~~~~~fD~v~id~~ 165 (247)
.+.++.+ ..+||+||+|..
T Consensus 155 ~~~L~~~------~~~fDvV~lDP~ 173 (258)
T 2oyr_A 155 LTALTDI------TPRPQVVYLDPM 173 (258)
T ss_dssp HHHSTTC------SSCCSEEEECCC
T ss_pred HHHHHhC------cccCCEEEEcCC
Confidence 8877654 347999999986
No 258
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.05 E-value=4.6e-09 Score=85.96 Aligned_cols=108 Identities=8% Similarity=0.033 Sum_probs=81.0
Q ss_pred HHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHH
Q 025824 68 GQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLL 147 (247)
Q Consensus 68 ~~~l~~l~~~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l 147 (247)
..+.........+.+|||||||+|..++.+. +..+++++|+++.+++.+++++...|. +.++.++|.....+
T Consensus 94 d~fY~~i~~~~~p~~VLDlGCG~gpLal~~~----~~~~y~a~DId~~~i~~ar~~~~~~g~--~~~~~v~D~~~~~~-- 165 (253)
T 3frh_A 94 DTLYDFIFSAETPRRVLDIACGLNPLALYER----GIASVWGCDIHQGLGDVITPFAREKDW--DFTFALQDVLCAPP-- 165 (253)
T ss_dssp HHHHHHHTSSCCCSEEEEETCTTTHHHHHHT----TCSEEEEEESBHHHHHHHHHHHHHTTC--EEEEEECCTTTSCC--
T ss_pred HHHHHHHhcCCCCCeEEEecCCccHHHHHhc----cCCeEEEEeCCHHHHHHHHHHHHhcCC--CceEEEeecccCCC--
Confidence 3344444444578999999999999988776 378999999999999999999988874 68888999875533
Q ss_pred HhhhcCCCceeEEEEcCC-----ccchHHHHHHHHhcCCCCeEEEEec
Q 025824 148 IQDEKNHGSFDFIFVDAD-----KDNYLNYHKRLIELVKVGGVIGYDN 190 (247)
Q Consensus 148 ~~~~~~~~~fD~v~id~~-----~~~~~~~l~~~~~~L~~gG~lv~d~ 190 (247)
.++||+|++--. .......+ .+...|++++++|.-.
T Consensus 166 ------~~~~DvvLllk~lh~LE~q~~~~~~-~ll~aL~~~~vvVsfP 206 (253)
T 3frh_A 166 ------AEAGDLALIFKLLPLLEREQAGSAM-ALLQSLNTPRMAVSFP 206 (253)
T ss_dssp ------CCBCSEEEEESCHHHHHHHSTTHHH-HHHHHCBCSEEEEEEE
T ss_pred ------CCCcchHHHHHHHHHhhhhchhhHH-HHHHHhcCCCEEEEcC
Confidence 569999987532 11112233 6667899999998654
No 259
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.05 E-value=1e-09 Score=96.58 Aligned_cols=114 Identities=8% Similarity=-0.023 Sum_probs=83.0
Q ss_pred HHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCC---C----------------------------------CCEEE
Q 025824 66 DEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALP---D----------------------------------DGKIL 108 (247)
Q Consensus 66 ~~~~~l~~l~~~~~~~~vLEiG~g~G~st~~la~~~~---~----------------------------------~~~v~ 108 (247)
..+..+-.++...+...+||.+||+|..++..+.... | ..+|+
T Consensus 181 ~LAaall~l~~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~ 260 (384)
T 3ldg_A 181 NMAAAIILLSNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDIS 260 (384)
T ss_dssp HHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEE
T ss_pred HHHHHHHHHhCCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEE
Confidence 3333333344445567899999999999988775432 1 15799
Q ss_pred EEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCceeEEEEcCCc-------cchHHHHHHHHhcCC
Q 025824 109 AMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDFIFVDADK-------DNYLNYHKRLIELVK 181 (247)
Q Consensus 109 ~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~fD~v~id~~~-------~~~~~~l~~~~~~L~ 181 (247)
++|+++.+++.|++|+..+|+.++++++++|+.+... ..+||+|++|.+. .....++..+.+.|+
T Consensus 261 GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~~--------~~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk 332 (384)
T 3ldg_A 261 GFDFDGRMVEIARKNAREVGLEDVVKLKQMRLQDFKT--------NKINGVLISNPPYGERLLDDKAVDILYNEMGETFA 332 (384)
T ss_dssp EEESCHHHHHHHHHHHHHTTCTTTEEEEECCGGGCCC--------CCCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHT
T ss_pred EEECCHHHHHHHHHHHHHcCCCCceEEEECChHHCCc--------cCCcCEEEECCchhhccCCHHHHHHHHHHHHHHHh
Confidence 9999999999999999999998889999999987532 3589999999772 233445555555555
Q ss_pred C--CeEEE
Q 025824 182 V--GGVIG 187 (247)
Q Consensus 182 ~--gG~lv 187 (247)
+ ||.+.
T Consensus 333 ~~~g~~~~ 340 (384)
T 3ldg_A 333 PLKTWSQF 340 (384)
T ss_dssp TCTTSEEE
T ss_pred hCCCcEEE
Confidence 4 66554
No 260
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.04 E-value=4.8e-10 Score=98.77 Aligned_cols=102 Identities=20% Similarity=0.178 Sum_probs=77.2
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCC-------------------------------------CCCEEEEEeCCcchHHHH
Q 025824 78 VNAKNTMEIGVYTGYSLLATALALP-------------------------------------DDGKILAMDINRENYELG 120 (247)
Q Consensus 78 ~~~~~vLEiG~g~G~st~~la~~~~-------------------------------------~~~~v~~iD~~~~~~~~a 120 (247)
.+..+|||.|||+|..++.++.... ...+|+++|+++.+++.|
T Consensus 194 ~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~A 273 (385)
T 3ldu_A 194 KAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDIA 273 (385)
T ss_dssp CTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHHH
T ss_pred CCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHHH
Confidence 4567899999999999988776521 125899999999999999
Q ss_pred HHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCceeEEEEcCCcc-------chHHHHHHHHhcCCC--CeEEE
Q 025824 121 LPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDFIFVDADKD-------NYLNYHKRLIELVKV--GGVIG 187 (247)
Q Consensus 121 ~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~fD~v~id~~~~-------~~~~~l~~~~~~L~~--gG~lv 187 (247)
++|+..+|+.+++++.++|+.+... ..+||+|+++.+.. .....+..+.+.|++ |+.+.
T Consensus 274 r~Na~~~gl~~~i~~~~~D~~~l~~--------~~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~ 341 (385)
T 3ldu_A 274 RENAEIAGVDEYIEFNVGDATQFKS--------EDEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKNWSYY 341 (385)
T ss_dssp HHHHHHHTCGGGEEEEECCGGGCCC--------SCBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBSCEEE
T ss_pred HHHHHHcCCCCceEEEECChhhcCc--------CCCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCCCEEE
Confidence 9999999998789999999987532 36899999998832 223344444444444 55544
No 261
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.01 E-value=2.5e-10 Score=100.06 Aligned_cols=97 Identities=13% Similarity=0.135 Sum_probs=77.3
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCcee
Q 025824 79 NAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFD 158 (247)
Q Consensus 79 ~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~fD 158 (247)
+..+|||||||+|..+..+++..| +.+++++|+ +.+++.|++ . .+++++.+|+.+.+ . .||
T Consensus 209 ~~~~vLDvG~G~G~~~~~l~~~~~-~~~~~~~D~-~~~~~~a~~------~-~~v~~~~~d~~~~~---------~-~~D 269 (372)
T 1fp1_D 209 GISTLVDVGGGSGRNLELIISKYP-LIKGINFDL-PQVIENAPP------L-SGIEHVGGDMFASV---------P-QGD 269 (372)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHTTCCC------C-TTEEEEECCTTTCC---------C-CEE
T ss_pred CCCEEEEeCCCCcHHHHHHHHHCC-CCeEEEeCh-HHHHHhhhh------c-CCCEEEeCCcccCC---------C-CCC
Confidence 467999999999999999999987 789999999 888776654 1 46999999987621 2 399
Q ss_pred EEEEcCCcc-----chHHHHHHHHhcCCCCeEEEEeccccc
Q 025824 159 FIFVDADKD-----NYLNYHKRLIELVKVGGVIGYDNTLWN 194 (247)
Q Consensus 159 ~v~id~~~~-----~~~~~l~~~~~~L~~gG~lv~d~~~~~ 194 (247)
+|++...-. .....++.+.+.|+|||.+++.+...+
T Consensus 270 ~v~~~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 310 (372)
T 1fp1_D 270 AMILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFILP 310 (372)
T ss_dssp EEEEESSGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEEC
T ss_pred EEEEecccccCCHHHHHHHHHHHHHhcCCCCEEEEEEeccC
Confidence 999865422 223789999999999999998776544
No 262
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.99 E-value=6e-10 Score=96.83 Aligned_cols=98 Identities=14% Similarity=0.139 Sum_probs=77.8
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCce
Q 025824 78 VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSF 157 (247)
Q Consensus 78 ~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~f 157 (247)
.+..+|||||||+|..+..+++..| +.+++++|+ +.+++.|++ . .+++++.+|+.+.+ ..|
T Consensus 187 ~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~------~-~~v~~~~~d~~~~~----------p~~ 247 (352)
T 1fp2_A 187 DGLESIVDVGGGTGTTAKIICETFP-KLKCIVFDR-PQVVENLSG------S-NNLTYVGGDMFTSI----------PNA 247 (352)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHTTCCC------B-TTEEEEECCTTTCC----------CCC
T ss_pred ccCceEEEeCCCccHHHHHHHHHCC-CCeEEEeeC-HHHHhhccc------C-CCcEEEeccccCCC----------CCc
Confidence 4568999999999999999999887 789999999 988877664 1 35999999986521 249
Q ss_pred eEEEEcCCc-----cchHHHHHHHHhcCCC---CeEEEEeccccc
Q 025824 158 DFIFVDADK-----DNYLNYHKRLIELVKV---GGVIGYDNTLWN 194 (247)
Q Consensus 158 D~v~id~~~-----~~~~~~l~~~~~~L~~---gG~lv~d~~~~~ 194 (247)
|+|++...- ......++.+.+.|+| ||.+++.+..++
T Consensus 248 D~v~~~~~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~ 292 (352)
T 1fp2_A 248 DAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVID 292 (352)
T ss_dssp SEEEEESCGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEECEEC
T ss_pred cEEEeehhhccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeecC
Confidence 999986542 1223788999999999 999988776543
No 263
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.99 E-value=1.1e-09 Score=95.32 Aligned_cols=107 Identities=13% Similarity=0.121 Sum_probs=84.6
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcC---C----CCcEEEEEecchhhhHHHHhh
Q 025824 78 VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAG---V----AHKIDFREGPALPVLDLLIQD 150 (247)
Q Consensus 78 ~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g---~----~~~i~~~~gd~~~~l~~l~~~ 150 (247)
.++++||-||.|.|..+..+++. + ..+|+.+|++++.++.+++++.... . .++++++.+|+.+++....++
T Consensus 204 ~~pkrVLIIGgGdG~~~revlkh-~-~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~ 281 (381)
T 3c6k_A 204 YTGKDVLILGGGDGGILCEIVKL-K-PKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKE 281 (381)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTT-C-CSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHH
T ss_pred CCCCeEEEECCCcHHHHHHHHhc-C-CceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhc
Confidence 35789999999999999998875 4 4799999999999999999875321 1 146999999999998765432
Q ss_pred hcCCCceeEEEEcCCc-------------cchHHHHHHHHhcCCCCeEEEEe
Q 025824 151 EKNHGSFDFIFVDADK-------------DNYLNYHKRLIELVKVGGVIGYD 189 (247)
Q Consensus 151 ~~~~~~fD~v~id~~~-------------~~~~~~l~~~~~~L~~gG~lv~d 189 (247)
.++||+|++|... .-..++++.+.+.|+|||+++.-
T Consensus 282 ---~~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q 330 (381)
T 3c6k_A 282 ---GREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQ 330 (381)
T ss_dssp ---TCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred ---cCceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEe
Confidence 4689999999531 11256788999999999999863
No 264
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.97 E-value=3.6e-09 Score=88.02 Aligned_cols=99 Identities=10% Similarity=0.034 Sum_probs=71.8
Q ss_pred CCCCccccCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEE
Q 025824 56 HPWNIMTTSADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDF 135 (247)
Q Consensus 56 ~~~~~~~~~~~~~~~l~~l~~~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~ 135 (247)
.|..+. ..+.....+...+...+..+|||||||+|..|..+++. +++|+++|+++++++.+++++.. .+++++
T Consensus 7 ~GQnFL-~d~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~---~~~V~avEid~~~~~~~~~~~~~---~~~v~~ 79 (255)
T 3tqs_A 7 FGQHFL-HDSFVLQKIVSAIHPQKTDTLVEIGPGRGALTDYLLTE---CDNLALVEIDRDLVAFLQKKYNQ---QKNITI 79 (255)
T ss_dssp --CCEE-CCHHHHHHHHHHHCCCTTCEEEEECCTTTTTHHHHTTT---SSEEEEEECCHHHHHHHHHHHTT---CTTEEE
T ss_pred CCcccc-cCHHHHHHHHHhcCCCCcCEEEEEcccccHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHhh---CCCcEE
Confidence 344333 34555555555555666789999999999999999975 47999999999999999998865 357999
Q ss_pred EEecchhh-hHHHHhhhcCCCceeEEEEcCCc
Q 025824 136 REGPALPV-LDLLIQDEKNHGSFDFIFVDADK 166 (247)
Q Consensus 136 ~~gd~~~~-l~~l~~~~~~~~~fD~v~id~~~ 166 (247)
+++|+.+. ++.+. ..++|| |+.+.+.
T Consensus 80 i~~D~~~~~~~~~~----~~~~~~-vv~NlPY 106 (255)
T 3tqs_A 80 YQNDALQFDFSSVK----TDKPLR-VVGNLPY 106 (255)
T ss_dssp EESCTTTCCGGGSC----CSSCEE-EEEECCH
T ss_pred EEcchHhCCHHHhc----cCCCeE-EEecCCc
Confidence 99999875 33221 125788 6666663
No 265
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.96 E-value=1.8e-09 Score=99.84 Aligned_cols=80 Identities=21% Similarity=0.306 Sum_probs=67.4
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCce
Q 025824 78 VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSF 157 (247)
Q Consensus 78 ~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~f 157 (247)
.++.+|||||||.|..+..||+. +++|+|||.++.+++.|+......|.. ++++.++++.+..... ..++|
T Consensus 65 ~~~~~vLDvGCG~G~~~~~la~~---ga~V~giD~~~~~i~~a~~~a~~~~~~-~~~~~~~~~~~~~~~~-----~~~~f 135 (569)
T 4azs_A 65 GRPLNVLDLGCAQGFFSLSLASK---GATIVGIDFQQENINVCRALAEENPDF-AAEFRVGRIEEVIAAL-----EEGEF 135 (569)
T ss_dssp TSCCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHTSTTS-EEEEEECCHHHHHHHC-----CTTSC
T ss_pred CCCCeEEEECCCCcHHHHHHHhC---CCEEEEECCCHHHHHHHHHHHHhcCCC-ceEEEECCHHHHhhhc-----cCCCc
Confidence 46789999999999999999985 789999999999999999999887742 6999999997765443 25789
Q ss_pred eEEEEcCCc
Q 025824 158 DFIFVDADK 166 (247)
Q Consensus 158 D~v~id~~~ 166 (247)
|+|++-..-
T Consensus 136 D~v~~~e~~ 144 (569)
T 4azs_A 136 DLAIGLSVF 144 (569)
T ss_dssp SEEEEESCH
T ss_pred cEEEECcch
Confidence 999876553
No 266
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.91 E-value=2.5e-09 Score=90.54 Aligned_cols=89 Identities=18% Similarity=0.192 Sum_probs=67.1
Q ss_pred cCCCEEEEEcccc------cHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEE-EEecchhhhHHHHhh
Q 025824 78 VNAKNTMEIGVYT------GYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDF-REGPALPVLDLLIQD 150 (247)
Q Consensus 78 ~~~~~vLEiG~g~------G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~-~~gd~~~~l~~l~~~ 150 (247)
.+..+|||+|||+ |. ..+++.++++++|+++|+++. + +++++ +++|+.+...
T Consensus 62 ~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-------------v-~~v~~~i~gD~~~~~~----- 120 (290)
T 2xyq_A 62 PYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-------------V-SDADSTLIGDCATVHT----- 120 (290)
T ss_dssp CTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-------------B-CSSSEEEESCGGGCCC-----
T ss_pred CCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-------------C-CCCEEEEECccccCCc-----
Confidence 4567999999954 65 555666776789999999998 1 35788 9999875421
Q ss_pred hcCCCceeEEEEcCCcc--------------chHHHHHHHHhcCCCCeEEEEec
Q 025824 151 EKNHGSFDFIFVDADKD--------------NYLNYHKRLIELVKVGGVIGYDN 190 (247)
Q Consensus 151 ~~~~~~fD~v~id~~~~--------------~~~~~l~~~~~~L~~gG~lv~d~ 190 (247)
.++||+|+.|.... .+...++.+.+.|+|||.+++..
T Consensus 121 ---~~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~ 171 (290)
T 2xyq_A 121 ---ANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKI 171 (290)
T ss_dssp ---SSCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ---cCcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 36899999975321 13468888999999999999863
No 267
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.90 E-value=5.6e-10 Score=95.33 Aligned_cols=95 Identities=9% Similarity=0.039 Sum_probs=66.5
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeC----CcchHHHHHHHHHHcCCCCcEEEEEe-cchhhhHHHHhhhcC
Q 025824 79 NAKNTMEIGVYTGYSLLATALALPDDGKILAMDI----NRENYELGLPVIQKAGVAHKIDFREG-PALPVLDLLIQDEKN 153 (247)
Q Consensus 79 ~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~----~~~~~~~a~~~~~~~g~~~~i~~~~g-d~~~~l~~l~~~~~~ 153 (247)
+..+|||+|||+|..+..+++. ++|+++|+ ++..++.+. .+..+ .++++++++ |+.+. +
T Consensus 82 ~g~~VLDlGcG~G~~s~~la~~----~~V~gvD~~~~~~~~~~~~~~--~~~~~-~~~v~~~~~~D~~~l-~-------- 145 (305)
T 2p41_A 82 PEGKVVDLGCGRGGWSYYCGGL----KNVREVKGLTKGGPGHEEPIP--MSTYG-WNLVRLQSGVDVFFI-P-------- 145 (305)
T ss_dssp CCEEEEEETCTTSHHHHHHHTS----TTEEEEEEECCCSTTSCCCCC--CCSTT-GGGEEEECSCCTTTS-C--------
T ss_pred CCCEEEEEcCCCCHHHHHHHhc----CCEEEEeccccCchhHHHHHH--hhhcC-CCCeEEEeccccccC-C--------
Confidence 3479999999999999999975 58999999 453321110 11111 146899988 77643 2
Q ss_pred CCceeEEEEcCCcc--c-------hHHHHHHHHhcCCCCeEEEEe
Q 025824 154 HGSFDFIFVDADKD--N-------YLNYHKRLIELVKVGGVIGYD 189 (247)
Q Consensus 154 ~~~fD~v~id~~~~--~-------~~~~l~~~~~~L~~gG~lv~d 189 (247)
.++||+|++|.... . ....+..+.+.|+|||.+++.
T Consensus 146 ~~~fD~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~k 190 (305)
T 2p41_A 146 PERCDTLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVK 190 (305)
T ss_dssp CCCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred cCCCCEEEECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 46899999987531 1 114577778999999999984
No 268
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.89 E-value=1.1e-08 Score=85.68 Aligned_cols=100 Identities=11% Similarity=-0.046 Sum_probs=72.5
Q ss_pred CHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhh
Q 025824 64 SADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPV 143 (247)
Q Consensus 64 ~~~~~~~l~~l~~~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~ 143 (247)
.+....-+...+...+. +|||||||+|..|..+++. +++|+++|+++++++.+++++.. .+++++++|+.+.
T Consensus 32 d~~i~~~Iv~~~~~~~~-~VLEIG~G~G~lt~~L~~~---~~~V~avEid~~~~~~l~~~~~~----~~v~vi~~D~l~~ 103 (271)
T 3fut_A 32 SEAHLRRIVEAARPFTG-PVFEVGPGLGALTRALLEA---GAEVTAIEKDLRLRPVLEETLSG----LPVRLVFQDALLY 103 (271)
T ss_dssp CHHHHHHHHHHHCCCCS-CEEEECCTTSHHHHHHHHT---TCCEEEEESCGGGHHHHHHHTTT----SSEEEEESCGGGS
T ss_pred CHHHHHHHHHhcCCCCC-eEEEEeCchHHHHHHHHHc---CCEEEEEECCHHHHHHHHHhcCC----CCEEEEECChhhC
Confidence 44444444444555556 9999999999999999986 46999999999999999998752 5799999999875
Q ss_pred hHHHHhhhcCCCceeEEEEcCCccchHHHHHHHH
Q 025824 144 LDLLIQDEKNHGSFDFIFVDADKDNYLNYHKRLI 177 (247)
Q Consensus 144 l~~l~~~~~~~~~fD~v~id~~~~~~~~~l~~~~ 177 (247)
-.. ....+|.|+.+.+..-..+.+..+.
T Consensus 104 ~~~------~~~~~~~iv~NlPy~iss~il~~ll 131 (271)
T 3fut_A 104 PWE------EVPQGSLLVANLPYHIATPLVTRLL 131 (271)
T ss_dssp CGG------GSCTTEEEEEEECSSCCHHHHHHHH
T ss_pred Chh------hccCccEEEecCcccccHHHHHHHh
Confidence 221 0136898988776443344444444
No 269
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.87 E-value=5.5e-09 Score=95.85 Aligned_cols=120 Identities=14% Similarity=0.069 Sum_probs=90.4
Q ss_pred cCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCC-----------------CCEEEEEeCCcchHHHHHHHHH
Q 025824 63 TSADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPD-----------------DGKILAMDINRENYELGLPVIQ 125 (247)
Q Consensus 63 ~~~~~~~~l~~l~~~~~~~~vLEiG~g~G~st~~la~~~~~-----------------~~~v~~iD~~~~~~~~a~~~~~ 125 (247)
.++....++..++...+..+|+|.|||+|...+.+++.+.. ..+++|+|+++.+++.|+.++.
T Consensus 153 TP~~iv~~mv~~l~p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~ 232 (541)
T 2ar0_A 153 TPRPLIKTIIHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCL 232 (541)
T ss_dssp CCHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhccCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHH
Confidence 34555666666665555679999999999998888765431 2479999999999999999998
Q ss_pred HcCCCC----cEEEEEecchhhhHHHHhhhcCCCceeEEEEcCCccc-----------------hHHHHHHHHhcCCCCe
Q 025824 126 KAGVAH----KIDFREGPALPVLDLLIQDEKNHGSFDFIFVDADKDN-----------------YLNYHKRLIELVKVGG 184 (247)
Q Consensus 126 ~~g~~~----~i~~~~gd~~~~l~~l~~~~~~~~~fD~v~id~~~~~-----------------~~~~l~~~~~~L~~gG 184 (247)
..|+.. ++.++++|+...... ...+||+|+.+.+... ...++..+.++|+|||
T Consensus 233 l~gi~~~~~~~~~I~~gDtL~~~~~------~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gG 306 (541)
T 2ar0_A 233 LHDIEGNLDHGGAIRLGNTLGSDGE------NLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGG 306 (541)
T ss_dssp TTTCCCBGGGTBSEEESCTTSHHHH------TSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEE
T ss_pred HhCCCccccccCCeEeCCCcccccc------cccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCC
Confidence 888754 278999998764322 1468999999876211 2368888999999999
Q ss_pred EEEE
Q 025824 185 VIGY 188 (247)
Q Consensus 185 ~lv~ 188 (247)
.+++
T Consensus 307 r~a~ 310 (541)
T 2ar0_A 307 RAAV 310 (541)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8765
No 270
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.87 E-value=1e-08 Score=84.63 Aligned_cols=73 Identities=14% Similarity=0.090 Sum_probs=57.1
Q ss_pred HHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhh
Q 025824 65 ADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPV 143 (247)
Q Consensus 65 ~~~~~~l~~l~~~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~ 143 (247)
+.....+...+...+..+|||||||+|..+..+++. +++|+++|+++++++.+++++... ++++++++|+.+.
T Consensus 16 ~~~~~~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~---~~v~~~~~D~~~~ 88 (244)
T 1qam_A 16 KHNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQR---CNFVTAIEIDHKLCKTTENKLVDH---DNFQVLNKDILQF 88 (244)
T ss_dssp HHHHHHHHTTCCCCTTCEEEEECCTTSHHHHHHHHH---SSEEEEECSCHHHHHHHHHHTTTC---CSEEEECCCGGGC
T ss_pred HHHHHHHHHhCCCCCCCEEEEEeCCchHHHHHHHHc---CCeEEEEECCHHHHHHHHHhhccC---CCeEEEEChHHhC
Confidence 433333333333345679999999999999999987 379999999999999999987642 5799999999765
No 271
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.87 E-value=4e-09 Score=91.81 Aligned_cols=98 Identities=14% Similarity=0.048 Sum_probs=76.9
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCce
Q 025824 78 VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSF 157 (247)
Q Consensus 78 ~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~f 157 (247)
.+..+|||||||+|..+..+++..| +.+++++|+ +.+++.+++ . .+++++.+|..+. ...|
T Consensus 192 ~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~------~-~~v~~~~~d~~~~----------~~~~ 252 (358)
T 1zg3_A 192 EGLESLVDVGGGTGGVTKLIHEIFP-HLKCTVFDQ-PQVVGNLTG------N-ENLNFVGGDMFKS----------IPSA 252 (358)
T ss_dssp HTCSEEEEETCTTSHHHHHHHHHCT-TSEEEEEEC-HHHHSSCCC------C-SSEEEEECCTTTC----------CCCC
T ss_pred cCCCEEEEECCCcCHHHHHHHHHCC-CCeEEEecc-HHHHhhccc------C-CCcEEEeCccCCC----------CCCc
Confidence 4568999999999999999999987 789999999 777766553 2 3599999998752 1259
Q ss_pred eEEEEcCCc-----cchHHHHHHHHhcCCC---CeEEEEeccccc
Q 025824 158 DFIFVDADK-----DNYLNYHKRLIELVKV---GGVIGYDNTLWN 194 (247)
Q Consensus 158 D~v~id~~~-----~~~~~~l~~~~~~L~~---gG~lv~d~~~~~ 194 (247)
|+|++...- ......++.+.+.|+| ||.+++.+...+
T Consensus 253 D~v~~~~vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~ 297 (358)
T 1zg3_A 253 DAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISID 297 (358)
T ss_dssp SEEEEESCGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEECEEC
T ss_pred eEEEEcccccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeccC
Confidence 999986542 2234888999999999 999888766543
No 272
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.87 E-value=5.7e-10 Score=93.44 Aligned_cols=97 Identities=10% Similarity=-0.033 Sum_probs=67.1
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHH-HHcCCCCcEEEE--EecchhhhHHHHhhhcCCC
Q 025824 79 NAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVI-QKAGVAHKIDFR--EGPALPVLDLLIQDEKNHG 155 (247)
Q Consensus 79 ~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~-~~~g~~~~i~~~--~gd~~~~l~~l~~~~~~~~ 155 (247)
+..+|||+|||+|..+..+++. ++|+++|+++ ++..+++.. .......+++++ ++|+.+. + .+
T Consensus 74 ~g~~VLDlGcGtG~~s~~la~~----~~V~gvD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l-~--------~~ 139 (265)
T 2oxt_A 74 LTGRVVDLGCGRGGWSYYAASR----PHVMDVRAYT-LGVGGHEVPRITESYGWNIVKFKSRVDIHTL-P--------VE 139 (265)
T ss_dssp CCEEEEEESCTTSHHHHHHHTS----TTEEEEEEEC-CCCSSCCCCCCCCBTTGGGEEEECSCCTTTS-C--------CC
T ss_pred CCCEEEEeCcCCCHHHHHHHHc----CcEEEEECch-hhhhhhhhhhhhhccCCCeEEEecccCHhHC-C--------CC
Confidence 4568999999999999999875 6899999998 432221110 000011168888 8888753 2 46
Q ss_pred ceeEEEEcCCc--cch-------HHHHHHHHhcCCCCe--EEEEe
Q 025824 156 SFDFIFVDADK--DNY-------LNYHKRLIELVKVGG--VIGYD 189 (247)
Q Consensus 156 ~fD~v~id~~~--~~~-------~~~l~~~~~~L~~gG--~lv~d 189 (247)
+||+|++|... ... ...++.+.+.|+||| .+++.
T Consensus 140 ~fD~V~sd~~~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~k 184 (265)
T 2oxt_A 140 RTDVIMCDVGESSPKWSVESERTIKILELLEKWKVKNPSADFVVK 184 (265)
T ss_dssp CCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEE
T ss_pred CCcEEEEeCcccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEE
Confidence 89999998651 111 136778889999999 88884
No 273
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.86 E-value=3.7e-10 Score=95.10 Aligned_cols=97 Identities=7% Similarity=-0.056 Sum_probs=67.5
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHH-HHcCCCCcEEEE--EecchhhhHHHHhhhcCCC
Q 025824 79 NAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVI-QKAGVAHKIDFR--EGPALPVLDLLIQDEKNHG 155 (247)
Q Consensus 79 ~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~-~~~g~~~~i~~~--~gd~~~~l~~l~~~~~~~~ 155 (247)
+..+|||+|||+|..+..+++. ++|+++|+++ ++..+++.. .......+++++ ++|+.+. + .+
T Consensus 82 ~g~~VLDlGcGtG~~s~~la~~----~~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l-~--------~~ 147 (276)
T 2wa2_A 82 LKGTVVDLGCGRGSWSYYAASQ----PNVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDVTKM-E--------PF 147 (276)
T ss_dssp CCEEEEEESCTTCHHHHHHHTS----TTEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCGGGC-C--------CC
T ss_pred CCCEEEEeccCCCHHHHHHHHc----CCEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCcHhhC-C--------CC
Confidence 4568999999999999999875 6899999998 432222110 000111268888 8888653 2 46
Q ss_pred ceeEEEEcCCc--cc-----h--HHHHHHHHhcCCCCe--EEEEe
Q 025824 156 SFDFIFVDADK--DN-----Y--LNYHKRLIELVKVGG--VIGYD 189 (247)
Q Consensus 156 ~fD~v~id~~~--~~-----~--~~~l~~~~~~L~~gG--~lv~d 189 (247)
+||+|++|... .. . ...++.+.+.|+||| .+++.
T Consensus 148 ~fD~Vvsd~~~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~ 192 (276)
T 2wa2_A 148 QADTVLCDIGESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVK 192 (276)
T ss_dssp CCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEE
T ss_pred CcCEEEECCCcCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEE
Confidence 89999998651 01 1 136778889999999 88874
No 274
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.83 E-value=1.5e-07 Score=86.18 Aligned_cols=124 Identities=12% Similarity=0.099 Sum_probs=94.6
Q ss_pred ccccCHHHHHHHHHHHh----hcCCCEEEEEcccccHHHHHHHhhCC--CCCEEEEEeCCcchHHHHHHHHHHcCCC-Cc
Q 025824 60 IMTTSADEGQFLNMLLK----LVNAKNTMEIGVYTGYSLLATALALP--DDGKILAMDINRENYELGLPVIQKAGVA-HK 132 (247)
Q Consensus 60 ~~~~~~~~~~~l~~l~~----~~~~~~vLEiG~g~G~st~~la~~~~--~~~~v~~iD~~~~~~~~a~~~~~~~g~~-~~ 132 (247)
...+++....++..++. ..+..+|+|.+||+|...+.+++.+. ...+++|+|+++..+..|+.|+...|+. ++
T Consensus 198 ~fyTP~~Vv~lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~ 277 (542)
T 3lkd_A 198 EFYTPQPVAKLMTQIAFLGREDKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIEN 277 (542)
T ss_dssp SCCCCHHHHHHHHHHHHTTCTTCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGG
T ss_pred eecccHHHHHHHHHHHhcccCCCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCc
Confidence 34456777888887776 33567999999999999998888764 2579999999999999999999988885 47
Q ss_pred EEEEEecchhhh-HHHHhhhcCCCceeEEEEcCCcc-------------c---h----------HHHHHHHHhcCC-CCe
Q 025824 133 IDFREGPALPVL-DLLIQDEKNHGSFDFIFVDADKD-------------N---Y----------LNYHKRLIELVK-VGG 184 (247)
Q Consensus 133 i~~~~gd~~~~l-~~l~~~~~~~~~fD~v~id~~~~-------------~---~----------~~~l~~~~~~L~-~gG 184 (247)
+.+.++|....- +.. ...+||+|+.+.+.. . + ..++..+.++|+ |||
T Consensus 278 ~~I~~gDtL~~d~p~~-----~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gG 352 (542)
T 3lkd_A 278 QFLHNADTLDEDWPTQ-----EPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNG 352 (542)
T ss_dssp EEEEESCTTTSCSCCS-----SCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTC
T ss_pred cceEecceeccccccc-----ccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCce
Confidence 899999987541 111 246899999876510 0 1 237888899999 999
Q ss_pred EEEE
Q 025824 185 VIGY 188 (247)
Q Consensus 185 ~lv~ 188 (247)
.+++
T Consensus 353 r~a~ 356 (542)
T 3lkd_A 353 VMAI 356 (542)
T ss_dssp EEEE
T ss_pred eEEE
Confidence 8754
No 275
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.78 E-value=1.5e-08 Score=93.90 Aligned_cols=98 Identities=16% Similarity=0.038 Sum_probs=76.3
Q ss_pred CEEEEEcccccHHHHH---HHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCce
Q 025824 81 KNTMEIGVYTGYSLLA---TALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSF 157 (247)
Q Consensus 81 ~~vLEiG~g~G~st~~---la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~f 157 (247)
..||++|||+|-.... .++......+|++||.++ ++..|++..+..++.++|++++||+.+.- + .+++
T Consensus 359 ~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v~~N~~~dkVtVI~gd~eev~--L------PEKV 429 (637)
T 4gqb_A 359 QVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENWQFEEWGSQVTVVSSDMREWV--A------PEKA 429 (637)
T ss_dssp EEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHHHHHTTGGGEEEEESCTTTCC--C------SSCE
T ss_pred cEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHHHhccCCCeEEEEeCcceecc--C------Cccc
Confidence 4799999999998444 333333234899999997 67889999999999999999999998762 2 5799
Q ss_pred eEEEEcCC-----ccchHHHHHHHHhcCCCCeEEE
Q 025824 158 DFIFVDAD-----KDNYLNYHKRLIELVKVGGVIG 187 (247)
Q Consensus 158 D~v~id~~-----~~~~~~~l~~~~~~L~~gG~lv 187 (247)
|+|+.-.- .+..+..+....+.|||||+++
T Consensus 430 DIIVSEwMG~fLl~E~mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 430 DIIVSELLGSFADNELSPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp EEEECCCCBTTBGGGCHHHHHHHHGGGEEEEEEEE
T ss_pred CEEEEEcCcccccccCCHHHHHHHHHhcCCCcEEc
Confidence 99985322 4556677777778999999987
No 276
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.77 E-value=4.4e-08 Score=82.50 Aligned_cols=82 Identities=13% Similarity=0.118 Sum_probs=62.4
Q ss_pred CCCCccccCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCC-CCEEEEEeCCcchHHHHHHHHHHcCCCCcEE
Q 025824 56 HPWNIMTTSADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPD-DGKILAMDINRENYELGLPVIQKAGVAHKID 134 (247)
Q Consensus 56 ~~~~~~~~~~~~~~~l~~l~~~~~~~~vLEiG~g~G~st~~la~~~~~-~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~ 134 (247)
.|..+. ..+...+.+...+...+..+|||||||+|..|..+++..+. +++|+++|+++++++.++++. ..+++
T Consensus 20 ~GQ~fL-~d~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~-----~~~v~ 93 (279)
T 3uzu_A 20 FGQNFL-VDHGVIDAIVAAIRPERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF-----GELLE 93 (279)
T ss_dssp CSCCEE-CCHHHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH-----GGGEE
T ss_pred CCcccc-CCHHHHHHHHHhcCCCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc-----CCCcE
Confidence 444333 34444444544555566789999999999999999987543 356999999999999999983 25799
Q ss_pred EEEecchhh
Q 025824 135 FREGPALPV 143 (247)
Q Consensus 135 ~~~gd~~~~ 143 (247)
++++|+.+.
T Consensus 94 ~i~~D~~~~ 102 (279)
T 3uzu_A 94 LHAGDALTF 102 (279)
T ss_dssp EEESCGGGC
T ss_pred EEECChhcC
Confidence 999999875
No 277
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.73 E-value=2.8e-08 Score=93.80 Aligned_cols=118 Identities=12% Similarity=0.128 Sum_probs=82.8
Q ss_pred HHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhC---CC--------------------------------------C
Q 025824 66 DEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALAL---PD--------------------------------------D 104 (247)
Q Consensus 66 ~~~~~l~~l~~~~~~~~vLEiG~g~G~st~~la~~~---~~--------------------------------------~ 104 (247)
..+..+-.++...+...|||.+||+|..++..+... ++ .
T Consensus 177 ~LAa~ll~~~~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~ 256 (703)
T 3v97_A 177 TLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYS 256 (703)
T ss_dssp HHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHhhCCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCC
Confidence 333333334433456789999999999998877542 11 2
Q ss_pred CEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCceeEEEEcCCcc-------chHHHHH---
Q 025824 105 GKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDFIFVDADKD-------NYLNYHK--- 174 (247)
Q Consensus 105 ~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~fD~v~id~~~~-------~~~~~l~--- 174 (247)
.+++++|+++.+++.|+.|+..+|+.+.+++.++|+.+..+.. ..++||+|+.+.+.. ....++.
T Consensus 257 ~~i~G~Did~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~~~-----~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~ 331 (703)
T 3v97_A 257 SHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPL-----PKGPYGTVLSNPPYGERLDSEPALIALHSLLG 331 (703)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHTTCGGGEEEEECCGGGCCCSC-----TTCCCCEEEECCCCCC---CCHHHHHHHHHHH
T ss_pred ccEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCcccc-----ccCCCCEEEeCCCccccccchhHHHHHHHHHH
Confidence 5899999999999999999999999888999999998753211 123899999997732 2223333
Q ss_pred HHHhcCCCCeEEEE
Q 025824 175 RLIELVKVGGVIGY 188 (247)
Q Consensus 175 ~~~~~L~~gG~lv~ 188 (247)
..++.+.|||.+.+
T Consensus 332 ~~lk~~~~g~~~~i 345 (703)
T 3v97_A 332 RIMKNQFGGWNLSL 345 (703)
T ss_dssp HHHHHHCTTCEEEE
T ss_pred HHHHhhCCCCeEEE
Confidence 33455568887654
No 278
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.73 E-value=4.4e-10 Score=92.85 Aligned_cols=110 Identities=12% Similarity=0.100 Sum_probs=76.0
Q ss_pred HHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhH
Q 025824 66 DEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLD 145 (247)
Q Consensus 66 ~~~~~l~~l~~~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~ 145 (247)
.....+...+...+..+|||||||+|..+..+++. +++|+++|+++++++.+++++. ..++++++++|+.+...
T Consensus 16 ~~~~~i~~~~~~~~~~~VLDiG~G~G~~~~~l~~~---~~~v~~id~~~~~~~~a~~~~~---~~~~v~~~~~D~~~~~~ 89 (245)
T 1yub_A 16 KVLNQIIKQLNLKETDTVYEIGTGKGHLTTKLAKI---SKQVTSIELDSHLFNLSSEKLK---LNTRVTLIHQDILQFQF 89 (245)
T ss_dssp TTHHHHHHHCCCCSSEEEEECSCCCSSCSHHHHHH---SSEEEESSSSCSSSSSSSCTTT---TCSEEEECCSCCTTTTC
T ss_pred HHHHHHHHhcCCCCCCEEEEEeCCCCHHHHHHHHh---CCeEEEEECCHHHHHHHHHHhc---cCCceEEEECChhhcCc
Confidence 33333333444445679999999999999999987 3799999999999998888765 23579999999976521
Q ss_pred HHHhhhcCCCceeEEEEcCCccch--------------HHHH----HHHHhcCCCCeEEEE
Q 025824 146 LLIQDEKNHGSFDFIFVDADKDNY--------------LNYH----KRLIELVKVGGVIGY 188 (247)
Q Consensus 146 ~l~~~~~~~~~fD~v~id~~~~~~--------------~~~l----~~~~~~L~~gG~lv~ 188 (247)
. ..++| .|+.+.+.... ...+ +.+.++|+|||.+.+
T Consensus 90 ~------~~~~f-~vv~n~Py~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v 143 (245)
T 1yub_A 90 P------NKQRY-KIVGNIPYHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGL 143 (245)
T ss_dssp C------CSSEE-EEEEECCSSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHH
T ss_pred c------cCCCc-EEEEeCCccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhh
Confidence 0 12578 66666542111 1122 556788999988654
No 279
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.72 E-value=5.4e-08 Score=80.62 Aligned_cols=118 Identities=13% Similarity=0.047 Sum_probs=76.8
Q ss_pred CCCCccccCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEE
Q 025824 56 HPWNIMTTSADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDF 135 (247)
Q Consensus 56 ~~~~~~~~~~~~~~~l~~l~~~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~ 135 (247)
.|..+. ..+.....+...+...+..+|||||||+|..|..+++. + ..+|+++|+++.+++.++++ + ..++++
T Consensus 9 ~GQnfl-~d~~i~~~iv~~~~~~~~~~VLDiG~G~G~lt~~L~~~-~-~~~v~avEid~~~~~~~~~~----~-~~~v~~ 80 (249)
T 3ftd_A 9 FGQHLL-VSEGVLKKIAEELNIEEGNTVVEVGGGTGNLTKVLLQH-P-LKKLYVIELDREMVENLKSI----G-DERLEV 80 (249)
T ss_dssp CCSSCE-ECHHHHHHHHHHTTCCTTCEEEEEESCHHHHHHHHTTS-C-CSEEEEECCCHHHHHHHTTS----C-CTTEEE
T ss_pred cccccc-CCHHHHHHHHHhcCCCCcCEEEEEcCchHHHHHHHHHc-C-CCeEEEEECCHHHHHHHHhc----c-CCCeEE
Confidence 444333 23444444444444456779999999999999999876 2 47999999999999999876 1 257999
Q ss_pred EEecchhh-hHHHHhhhcCCCceeEEEEcCCccchHHHHHHHHhc--CCCCeEEEE
Q 025824 136 REGPALPV-LDLLIQDEKNHGSFDFIFVDADKDNYLNYHKRLIEL--VKVGGVIGY 188 (247)
Q Consensus 136 ~~gd~~~~-l~~l~~~~~~~~~fD~v~id~~~~~~~~~l~~~~~~--L~~gG~lv~ 188 (247)
+++|+.+. ++.+ .+.+ .|+.+.+..-..+.+..+... .-+.+++++
T Consensus 81 i~~D~~~~~~~~~------~~~~-~vv~NlPy~i~~~il~~ll~~~~~~~~~~~m~ 129 (249)
T 3ftd_A 81 INEDASKFPFCSL------GKEL-KVVGNLPYNVASLIIENTVYNKDCVPLAVFMV 129 (249)
T ss_dssp ECSCTTTCCGGGS------CSSE-EEEEECCTTTHHHHHHHHHHTGGGCSEEEEEE
T ss_pred EEcchhhCChhHc------cCCc-EEEEECchhccHHHHHHHHhcCCCCceEEEEE
Confidence 99999875 2221 1234 666676654444455555432 234455544
No 280
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.65 E-value=3.6e-08 Score=90.40 Aligned_cols=122 Identities=7% Similarity=0.078 Sum_probs=89.9
Q ss_pred ccccCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCC--------------CCEEEEEeCCcchHHHHHHHHH
Q 025824 60 IMTTSADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPD--------------DGKILAMDINRENYELGLPVIQ 125 (247)
Q Consensus 60 ~~~~~~~~~~~l~~l~~~~~~~~vLEiG~g~G~st~~la~~~~~--------------~~~v~~iD~~~~~~~~a~~~~~ 125 (247)
...+++....++..++... +.+|+|.+||+|...+.+++.+.. ..+++|+|+++..+..|+.++.
T Consensus 226 ~fyTP~~Vv~lmv~ll~p~-~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~ 304 (544)
T 3khk_A 226 QYYTPKSIVTLIVEMLEPY-KGRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMV 304 (544)
T ss_dssp TTCCCHHHHHHHHHHHCCC-SEEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHH
T ss_pred eEeCCHHHHHHHHHHHhcC-CCeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHH
Confidence 3445577777777776543 349999999999988876654320 3589999999999999999999
Q ss_pred HcCCCCcEEEEEecchhhhHHHHhhhcCCCceeEEEEcCCccc--------------------------------hHHHH
Q 025824 126 KAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDFIFVDADKDN--------------------------------YLNYH 173 (247)
Q Consensus 126 ~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~fD~v~id~~~~~--------------------------------~~~~l 173 (247)
..|+..++.+.++|.+..... ...+||+|+.+.+... ...++
T Consensus 305 l~gi~~~i~i~~gDtL~~~~~------~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl 378 (544)
T 3khk_A 305 IRGIDFNFGKKNADSFLDDQH------PDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWM 378 (544)
T ss_dssp HTTCCCBCCSSSCCTTTSCSC------TTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHH
T ss_pred HhCCCcccceeccchhcCccc------ccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHH
Confidence 999876666688887653211 1468999998766211 12578
Q ss_pred HHHHhcCCCCeEEEE
Q 025824 174 KRLIELVKVGGVIGY 188 (247)
Q Consensus 174 ~~~~~~L~~gG~lv~ 188 (247)
..+.++|+|||.+++
T Consensus 379 ~~~l~~Lk~gGr~ai 393 (544)
T 3khk_A 379 LHMLYHLAPTGSMAL 393 (544)
T ss_dssp HHHHHTEEEEEEEEE
T ss_pred HHHHHHhccCceEEE
Confidence 888999999998654
No 281
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.60 E-value=1.5e-07 Score=87.42 Aligned_cols=105 Identities=8% Similarity=-0.094 Sum_probs=73.6
Q ss_pred CCEEEEEcccccHHHHHHHhhC---C---------CCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHH
Q 025824 80 AKNTMEIGVYTGYSLLATALAL---P---------DDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLL 147 (247)
Q Consensus 80 ~~~vLEiG~g~G~st~~la~~~---~---------~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l 147 (247)
.+.|||+|||+|-.+...+.+. . ...+|++||.++..+...+.... .|+.++|+++.+|+.+.-...
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng~~d~VtVI~gd~eev~lp~ 488 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RTWKRRVTIIESDMRSLPGIA 488 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HTTTTCSEEEESCGGGHHHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cCCCCeEEEEeCchhhccccc
Confidence 4579999999999975432221 1 13599999999976655554443 788899999999998762211
Q ss_pred HhhhcCCCceeEEEEcCC-----ccchHHHHHHHHhcCCCCeEEE
Q 025824 148 IQDEKNHGSFDFIFVDAD-----KDNYLNYHKRLIELVKVGGVIG 187 (247)
Q Consensus 148 ~~~~~~~~~fD~v~id~~-----~~~~~~~l~~~~~~L~~gG~lv 187 (247)
... ..++.|+|+.-.- .+..++.++.+.+.|+|||+++
T Consensus 489 ~~~--~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 489 KDR--GFEQPDIIVSELLGSFGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp HHT--TCCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred ccC--CCCcccEEEEeccccccchhccHHHHHHHHHhCCCCcEEE
Confidence 111 2478999986432 2345577777779999999987
No 282
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.59 E-value=1.1e-06 Score=83.03 Aligned_cols=140 Identities=13% Similarity=0.109 Sum_probs=90.2
Q ss_pred cHHHHHHHHHHHhC--CCCccccCHHHHHHHHHHHhh------cCCCEEEEEcccccHHHHHHHhhCC--CCCEEEEEeC
Q 025824 43 PESMKELRELTAKH--PWNIMTTSADEGQFLNMLLKL------VNAKNTMEIGVYTGYSLLATALALP--DDGKILAMDI 112 (247)
Q Consensus 43 ~~~l~~~~~~~~~~--~~~~~~~~~~~~~~l~~l~~~------~~~~~vLEiG~g~G~st~~la~~~~--~~~~v~~iD~ 112 (247)
++....+.++.... ..+.....+....++..++.. .+..+|||.|||+|...+.++..++ ...+++|+|+
T Consensus 277 DdL~ell~eya~k~Rkk~GqFYTP~eLA~lMVeLA~ill~~~l~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEI 356 (878)
T 3s1s_A 277 DELAELIHDIATRGRGHEGVVPTDIELGKVLSIISQHILGRPLTEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDI 356 (878)
T ss_dssp HHHHHHHHHHHTTSCCCCBSSSCCHHHHHHHHHHHHHHHCSCCCTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECS
T ss_pred HHHHHHHHHHHHHhCCcCceEcCCHHHHHHHHHHHhhhccccCCCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEEC
Confidence 33334444444322 233344567778877776321 1356999999999999999998774 2368999999
Q ss_pred CcchHHHH--HHHHHHcCCC---CcEEEEEecchhhhHHHHhhhcCCCceeEEEEcCCccc-------------------
Q 025824 113 NRENYELG--LPVIQKAGVA---HKIDFREGPALPVLDLLIQDEKNHGSFDFIFVDADKDN------------------- 168 (247)
Q Consensus 113 ~~~~~~~a--~~~~~~~g~~---~~i~~~~gd~~~~l~~l~~~~~~~~~fD~v~id~~~~~------------------- 168 (247)
++..++.| +.++...++. ....+..+|..+.-.. ...+||+|+.+.+...
T Consensus 357 Dp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~------~~~kFDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~ 430 (878)
T 3s1s_A 357 ETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPE------DFANVSVVVMNPPYVSGVTDPAIKRKFAHKIIQLT 430 (878)
T ss_dssp CGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGG------GGTTEEEEEECCBCCSSCCCHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhccccc------ccCCCCEEEECCCccccccchhhhhhHHHHhhhhc
Confidence 99999999 6665442221 1235555555432111 1468999999876310
Q ss_pred -------------hHHHHHHHHhcCCCCeEEEE
Q 025824 169 -------------YLNYHKRLIELVKVGGVIGY 188 (247)
Q Consensus 169 -------------~~~~l~~~~~~L~~gG~lv~ 188 (247)
+..++..+.++|++||.+++
T Consensus 431 p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAf 463 (878)
T 3s1s_A 431 GNRPQTLFGQIGVEALFLELVTELVQDGTVISA 463 (878)
T ss_dssp SSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEE
T ss_pred cccccccccccchHHHHHHHHHHhcCCCcEEEE
Confidence 23356778899999998875
No 283
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.58 E-value=1.4e-07 Score=78.28 Aligned_cols=94 Identities=10% Similarity=-0.032 Sum_probs=63.5
Q ss_pred HHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhh-
Q 025824 65 ADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPV- 143 (247)
Q Consensus 65 ~~~~~~l~~l~~~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~- 143 (247)
+.....+...+...+..+|||||||+|..|. +.. .+ ..+|+++|+++++++.+++++... ++++++++|+.+.
T Consensus 7 ~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~-l~~-~~-~~~v~avEid~~~~~~a~~~~~~~---~~v~~i~~D~~~~~ 80 (252)
T 1qyr_A 7 QFVIDSIVSAINPQKGQAMVEIGPGLAALTE-PVG-ER-LDQLTVIELDRDLAARLQTHPFLG---PKLTIYQQDAMTFN 80 (252)
T ss_dssp HHHHHHHHHHHCCCTTCCEEEECCTTTTTHH-HHH-TT-CSCEEEECCCHHHHHHHHTCTTTG---GGEEEECSCGGGCC
T ss_pred HHHHHHHHHhcCCCCcCEEEEECCCCcHHHH-hhh-CC-CCeEEEEECCHHHHHHHHHHhccC---CceEEEECchhhCC
Confidence 3344444444444566789999999999999 654 22 234999999999999998876542 4799999999874
Q ss_pred hHHHHhhhcCCCceeEEEEcCCcc
Q 025824 144 LDLLIQDEKNHGSFDFIFVDADKD 167 (247)
Q Consensus 144 l~~l~~~~~~~~~fD~v~id~~~~ 167 (247)
++.+... .+..|.|+...+..
T Consensus 81 ~~~~~~~---~~~~~~vvsNlPY~ 101 (252)
T 1qyr_A 81 FGELAEK---MGQPLRVFGNLPYN 101 (252)
T ss_dssp HHHHHHH---HTSCEEEEEECCTT
T ss_pred HHHhhcc---cCCceEEEECCCCC
Confidence 3332100 02356777776643
No 284
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.52 E-value=3.8e-07 Score=76.17 Aligned_cols=83 Identities=10% Similarity=0.043 Sum_probs=66.5
Q ss_pred hcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCc
Q 025824 77 LVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGS 156 (247)
Q Consensus 77 ~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~ 156 (247)
..+...+||++||.|..|..+++. +++|+++|.++.+++.|++ +.. +++++++++..+.-..+...+ .++
T Consensus 20 ~~~gg~~VD~T~G~GGHS~~il~~---~g~VigiD~Dp~Ai~~A~~-L~~----~rv~lv~~~f~~l~~~L~~~g--~~~ 89 (285)
T 1wg8_A 20 VRPGGVYVDATLGGAGHARGILER---GGRVIGLDQDPEAVARAKG-LHL----PGLTVVQGNFRHLKRHLAALG--VER 89 (285)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHH-TCC----TTEEEEESCGGGHHHHHHHTT--CSC
T ss_pred CCCCCEEEEeCCCCcHHHHHHHHC---CCEEEEEeCCHHHHHHHHh-hcc----CCEEEEECCcchHHHHHHHcC--CCC
Confidence 345679999999999999999987 6899999999999999998 643 589999999976543343222 368
Q ss_pred eeEEEEcCCccch
Q 025824 157 FDFIFVDADKDNY 169 (247)
Q Consensus 157 fD~v~id~~~~~~ 169 (247)
+|.|++|...+.+
T Consensus 90 vDgIL~DLGvSS~ 102 (285)
T 1wg8_A 90 VDGILADLGVSSF 102 (285)
T ss_dssp EEEEEEECSCCHH
T ss_pred cCEEEeCCccccc
Confidence 9999999875544
No 285
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.50 E-value=4.2e-08 Score=76.39 Aligned_cols=89 Identities=8% Similarity=0.039 Sum_probs=67.1
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCce
Q 025824 78 VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSF 157 (247)
Q Consensus 78 ~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~f 157 (247)
.+..+||++|||. +++|+++++++.|++.+.. +++++++|+.+.... +..+++|
T Consensus 11 ~~g~~vL~~~~g~-----------------v~vD~s~~ml~~a~~~~~~-----~~~~~~~d~~~~~~~----~~~~~~f 64 (176)
T 2ld4_A 11 SAGQFVAVVWDKS-----------------SPVEALKGLVDKLQALTGN-----EGRVSVENIKQLLQS----AHKESSF 64 (176)
T ss_dssp CTTSEEEEEECTT-----------------SCHHHHHHHHHHHHHHTTT-----TSEEEEEEGGGGGGG----CCCSSCE
T ss_pred CCCCEEEEecCCc-----------------eeeeCCHHHHHHHHHhccc-----CcEEEEechhcCccc----cCCCCCE
Confidence 4568999999985 2399999999999887532 489999999754210 0015789
Q ss_pred eEEEEcCC---c-cchHHHHHHHHhcCCCCeEEEEeccc
Q 025824 158 DFIFVDAD---K-DNYLNYHKRLIELVKVGGVIGYDNTL 192 (247)
Q Consensus 158 D~v~id~~---~-~~~~~~l~~~~~~L~~gG~lv~d~~~ 192 (247)
|+|++... . .+....++.+.+.|||||.+++.+..
T Consensus 65 D~V~~~~~l~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~ 103 (176)
T 2ld4_A 65 DIILSGLVPGSTTLHSAEILAEIARILRPGGCLFLKEPV 103 (176)
T ss_dssp EEEEECCSTTCCCCCCHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred eEEEECChhhhcccCHHHHHHHHHHHCCCCEEEEEEccc
Confidence 99998543 2 45688999999999999999995443
No 286
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=98.42 E-value=1.7e-07 Score=78.31 Aligned_cols=111 Identities=12% Similarity=0.198 Sum_probs=85.8
Q ss_pred HHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHH
Q 025824 68 GQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLL 147 (247)
Q Consensus 68 ~~~l~~l~~~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l 147 (247)
..++..+-. .++..+||+-+|+|..++.+++ ++.+++.+|.+++.++..++|++. ..+++++.+|+...+..+
T Consensus 81 ~~yf~~l~~-~n~~~~LDlfaGSGaLgiEaLS---~~d~~vfvE~~~~a~~~L~~Nl~~---~~~~~V~~~D~~~~L~~l 153 (283)
T 2oo3_A 81 LEYISVIKQ-INLNSTLSYYPGSPYFAINQLR---SQDRLYLCELHPTEYNFLLKLPHF---NKKVYVNHTDGVSKLNAL 153 (283)
T ss_dssp HHHHHHHHH-HSSSSSCCEEECHHHHHHHHSC---TTSEEEEECCSHHHHHHHTTSCCT---TSCEEEECSCHHHHHHHH
T ss_pred HHHHHHHHH-hcCCCceeEeCCcHHHHHHHcC---CCCeEEEEeCCHHHHHHHHHHhCc---CCcEEEEeCcHHHHHHHh
Confidence 345554444 4677899999999999998776 257999999999999988888865 367999999998888776
Q ss_pred HhhhcCCCceeEEEEcCCcc---chHHHHHHHHh--cCCCCeEEEE
Q 025824 148 IQDEKNHGSFDFIFVDADKD---NYLNYHKRLIE--LVKVGGVIGY 188 (247)
Q Consensus 148 ~~~~~~~~~fD~v~id~~~~---~~~~~l~~~~~--~L~~gG~lv~ 188 (247)
.+. ..+||+||+|.+.+ .+...++.+.+ .+.|+|++++
T Consensus 154 ~~~---~~~fdLVfiDPPYe~k~~~~~vl~~L~~~~~r~~~Gi~v~ 196 (283)
T 2oo3_A 154 LPP---PEKRGLIFIDPSYERKEEYKEIPYAIKNAYSKFSTGLYCV 196 (283)
T ss_dssp CSC---TTSCEEEEECCCCCSTTHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred cCC---CCCccEEEECCCCCCCcHHHHHHHHHHHhCccCCCeEEEE
Confidence 432 24799999999843 56666666653 6779999985
No 287
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.31 E-value=4e-06 Score=63.04 Aligned_cols=83 Identities=8% Similarity=-0.005 Sum_probs=56.9
Q ss_pred HHHHhhc-CCCEEEEEccccc-HHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHh
Q 025824 72 NMLLKLV-NAKNTMEIGVYTG-YSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQ 149 (247)
Q Consensus 72 ~~l~~~~-~~~~vLEiG~g~G-~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~ 149 (247)
..+.+.. .+.+|||||||.| ..+..|++.. +..|+++|++|..++ ++++|.++-...+
T Consensus 27 eYI~~~~~~~~rVlEVG~G~g~~vA~~La~~~--g~~V~atDInp~Av~----------------~v~dDiF~P~~~~-- 86 (153)
T 2k4m_A 27 VYIIRCSGPGTRVVEVGAGRFLYVSDYIRKHS--KVDLVLTDIKPSHGG----------------IVRDDITSPRMEI-- 86 (153)
T ss_dssp HHHHHHSCSSSEEEEETCTTCCHHHHHHHHHS--CCEEEEECSSCSSTT----------------EECCCSSSCCHHH--
T ss_pred HHHHhcCCCCCcEEEEccCCChHHHHHHHHhC--CCeEEEEECCccccc----------------eEEccCCCCcccc--
Confidence 3334443 3579999999999 5999999743 678999999998554 8888887744433
Q ss_pred hhcCCCceeEEEEcCCccchHHHHHHHHh
Q 025824 150 DEKNHGSFDFIFVDADKDNYLNYHKRLIE 178 (247)
Q Consensus 150 ~~~~~~~fD~v~id~~~~~~~~~l~~~~~ 178 (247)
.+.||+|..--++......+-.+.+
T Consensus 87 ----Y~~~DLIYsirPP~El~~~i~~lA~ 111 (153)
T 2k4m_A 87 ----YRGAALIYSIRPPAEIHSSLMRVAD 111 (153)
T ss_dssp ----HTTEEEEEEESCCTTTHHHHHHHHH
T ss_pred ----cCCcCEEEEcCCCHHHHHHHHHHHH
Confidence 2589999543333444444444444
No 288
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=98.13 E-value=9.1e-06 Score=69.47 Aligned_cols=85 Identities=15% Similarity=0.174 Sum_probs=66.6
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCce
Q 025824 78 VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSF 157 (247)
Q Consensus 78 ~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~f 157 (247)
.+...+||..+|.|.-|..+++.++++++|+++|.++++++.|+ .+ ..+++++++++..+....+...+ -.+++
T Consensus 56 ~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL----~~~Rv~lv~~nF~~l~~~L~~~g-~~~~v 129 (347)
T 3tka_A 56 RPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TI----DDPRFSIIHGPFSALGEYVAERD-LIGKI 129 (347)
T ss_dssp CTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TC----CCTTEEEEESCGGGHHHHHHHTT-CTTCE
T ss_pred CCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hh----cCCcEEEEeCCHHHHHHHHHhcC-CCCcc
Confidence 45678999999999999999999877899999999999999884 33 23689999999877654443322 11369
Q ss_pred eEEEEcCCccc
Q 025824 158 DFIFVDADKDN 168 (247)
Q Consensus 158 D~v~id~~~~~ 168 (247)
|.|++|...+.
T Consensus 130 DgILfDLGVSS 140 (347)
T 3tka_A 130 DGILLDLGVSS 140 (347)
T ss_dssp EEEEEECSCCH
T ss_pred cEEEECCccCH
Confidence 99999976544
No 289
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=97.99 E-value=2.8e-06 Score=80.07 Aligned_cols=109 Identities=16% Similarity=0.138 Sum_probs=75.9
Q ss_pred CCCEEEEEcccccHHHHHHHhhC-------CC----CCEEEEEeCCcchHHHHHHHH--------------HHc-----C
Q 025824 79 NAKNTMEIGVYTGYSLLATALAL-------PD----DGKILAMDINRENYELGLPVI--------------QKA-----G 128 (247)
Q Consensus 79 ~~~~vLEiG~g~G~st~~la~~~-------~~----~~~v~~iD~~~~~~~~a~~~~--------------~~~-----g 128 (247)
++-+|+|+|.|+|++.+.+.+.. |. ..+++++|..|-..+..++.+ ... |
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 137 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAG 137 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSE
T ss_pred CceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCC
Confidence 44689999999999988766543 11 257999999775555444322 221 1
Q ss_pred -----CCC---cEEEEEecchhhhHHHHhhhcCCCceeEEEEcCCccch------HHHHHHHHhcCCCCeEEEEe
Q 025824 129 -----VAH---KIDFREGPALPVLDLLIQDEKNHGSFDFIFVDADKDNY------LNYHKRLIELVKVGGVIGYD 189 (247)
Q Consensus 129 -----~~~---~i~~~~gd~~~~l~~l~~~~~~~~~fD~v~id~~~~~~------~~~l~~~~~~L~~gG~lv~d 189 (247)
+.+ +++++.||+.+.++.+... ....+|.+|+|+..... ..+|..+.++++|||.+...
T Consensus 138 ~~r~~~~~~~~~l~l~~gd~~~~l~~~~~~--~~~~~da~flD~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~ 210 (689)
T 3pvc_A 138 CHRILLADGAITLDLWFGDVNTLLPTLDDS--LNNQVDAWFLDGFAPAKNPDMWNEQLFNAMARMTRPGGTFSTF 210 (689)
T ss_dssp EEEEEETTTTEEEEEEESCHHHHGGGCCGG--GTTCEEEEEECSSCC--CCTTCSHHHHHHHHHHEEEEEEEEES
T ss_pred ceEEEecCCcEEEEEEccCHHHHHhhcccc--cCCceeEEEECCCCCCCChhhhhHHHHHHHHHHhCCCCEEEec
Confidence 111 5678899999988876211 03689999999874333 78899999999999998753
No 290
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=97.89 E-value=5e-05 Score=65.87 Aligned_cols=71 Identities=7% Similarity=0.116 Sum_probs=54.6
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCce
Q 025824 78 VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSF 157 (247)
Q Consensus 78 ~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~f 157 (247)
.+..+|||+||++|.+|..+++. +++|++||+.+-. . .+.. ..+|+++.+|+.+..+. .++|
T Consensus 210 ~~G~~vlDLGAaPGGWT~~l~~r---g~~V~aVD~~~l~-~----~l~~---~~~V~~~~~d~~~~~~~-------~~~~ 271 (375)
T 4auk_A 210 ANGMWAVDLGACPGGWTYQLVKR---NMWVYSVDNGPMA-Q----SLMD---TGQVTWLREDGFKFRPT-------RSNI 271 (375)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT---TCEEEEECSSCCC-H----HHHT---TTCEEEECSCTTTCCCC-------SSCE
T ss_pred CCCCEEEEeCcCCCHHHHHHHHC---CCEEEEEEhhhcC-h----hhcc---CCCeEEEeCccccccCC-------CCCc
Confidence 45789999999999999999875 6899999986531 1 1111 25799999999876542 4689
Q ss_pred eEEEEcCCc
Q 025824 158 DFIFVDADK 166 (247)
Q Consensus 158 D~v~id~~~ 166 (247)
|+|++|...
T Consensus 272 D~vvsDm~~ 280 (375)
T 4auk_A 272 SWMVCDMVE 280 (375)
T ss_dssp EEEEECCSS
T ss_pred CEEEEcCCC
Confidence 999999873
No 291
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=97.89 E-value=2.3e-05 Score=65.04 Aligned_cols=117 Identities=11% Similarity=0.074 Sum_probs=68.2
Q ss_pred HHHHHHHHHHHh--hcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchh
Q 025824 65 ADEGQFLNMLLK--LVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALP 142 (247)
Q Consensus 65 ~~~~~~l~~l~~--~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~ 142 (247)
...-+++...-. ..+..+|||+|||+|.++...+...+ ..+++++|+.-+....... ....|. ++..+.+++ +
T Consensus 58 RaA~KL~ei~ek~~l~~~~~VLDLGaAPGGWSQvAa~~~~-~~~v~g~dVGvDl~~~pi~-~~~~g~--~ii~~~~~~-d 132 (277)
T 3evf_A 58 RGTAKLRWFHERGYVKLEGRVIDLGCGRGGWCYYAAAQKE-VSGVKGFTLGRDGHEKPMN-VQSLGW--NIITFKDKT-D 132 (277)
T ss_dssp THHHHHHHHHHTTSSCCCEEEEEETCTTCHHHHHHHTSTT-EEEEEEECCCCTTCCCCCC-CCBTTG--GGEEEECSC-C
T ss_pred cHHHHHHHHHHhCCCCCCCEEEEecCCCCHHHHHHHHhcC-CCcceeEEEeccCcccccc-cCcCCC--CeEEEeccc-e
Confidence 344444443332 23456899999999999998887643 4577888876432100000 000111 344455654 2
Q ss_pred hhHHHHhhhcCCCceeEEEEcCCcc----ch-----HHHHHHHHhcCCCC-eEEEEecccc
Q 025824 143 VLDLLIQDEKNHGSFDFIFVDADKD----NY-----LNYHKRLIELVKVG-GVIGYDNTLW 193 (247)
Q Consensus 143 ~l~~l~~~~~~~~~fD~v~id~~~~----~~-----~~~l~~~~~~L~~g-G~lv~d~~~~ 193 (247)
.. .+ ..++||+|+.|.... .. ...++.+.+.|+|| |.+|+ .++.
T Consensus 133 v~-~l-----~~~~~DlVlsD~apnsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~-KVf~ 186 (277)
T 3evf_A 133 IH-RL-----EPVKCDTLLCDIGESSSSSVTEGERTVRVLDTVEKWLACGVDNFCV-KVLA 186 (277)
T ss_dssp TT-TS-----CCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEE-EESC
T ss_pred eh-hc-----CCCCccEEEecCccCcCchHHHHHHHHHHHHHHHHHhCCCCCeEEE-EecC
Confidence 21 12 257899999997432 11 12356667899999 99998 4444
No 292
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=97.86 E-value=8.5e-05 Score=62.87 Aligned_cols=105 Identities=15% Similarity=0.158 Sum_probs=68.2
Q ss_pred CCCEEEEEcccccHHHHHHHh---hCCCCC--EEEEEeCCc--------c-hHHHHHHHHHHcCC--CC--cEEEEEecc
Q 025824 79 NAKNTMEIGVYTGYSLLATAL---ALPDDG--KILAMDINR--------E-NYELGLPVIQKAGV--AH--KIDFREGPA 140 (247)
Q Consensus 79 ~~~~vLEiG~g~G~st~~la~---~~~~~~--~v~~iD~~~--------~-~~~~a~~~~~~~g~--~~--~i~~~~gd~ 140 (247)
+.-+|||+|-|+|+..+.... ...+.. +++++|..+ + ..+..+..+..... .. .+++..||+
T Consensus 96 ~~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GDa 175 (308)
T 3vyw_A 96 KVIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGDA 175 (308)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESCH
T ss_pred CCcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEechH
Confidence 345799999999997643222 222344 557777643 1 22333333333210 12 356788999
Q ss_pred hhhhHHHHhhhcCCCceeEEEEcCC--cc----chHHHHHHHHhcCCCCeEEEE
Q 025824 141 LPVLDLLIQDEKNHGSFDFIFVDAD--KD----NYLNYHKRLIELVKVGGVIGY 188 (247)
Q Consensus 141 ~~~l~~l~~~~~~~~~fD~v~id~~--~~----~~~~~l~~~~~~L~~gG~lv~ 188 (247)
.+.++.+ ....||++|.|+. .. ...++|+.+.++++|||+++-
T Consensus 176 ~~~l~~l-----~~~~~Da~flDgFsP~kNPeLWs~e~f~~l~~~~~pgg~laT 224 (308)
T 3vyw_A 176 RKRIKEV-----ENFKADAVFHDAFSPYKNPELWTLDFLSLIKERIDEKGYWVS 224 (308)
T ss_dssp HHHGGGC-----CSCCEEEEEECCSCTTTSGGGGSHHHHHHHHTTEEEEEEEEE
T ss_pred HHHHhhh-----cccceeEEEeCCCCcccCcccCCHHHHHHHHHHhCCCcEEEE
Confidence 9988876 2358999999985 11 125799999999999999984
No 293
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=97.85 E-value=7.7e-05 Score=68.16 Aligned_cols=124 Identities=13% Similarity=0.091 Sum_probs=87.1
Q ss_pred cccCHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCC------------CCEEEEEeCCcchHHHHHHHHHHcC
Q 025824 61 MTTSADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPD------------DGKILAMDINRENYELGLPVIQKAG 128 (247)
Q Consensus 61 ~~~~~~~~~~l~~l~~~~~~~~vLEiG~g~G~st~~la~~~~~------------~~~v~~iD~~~~~~~~a~~~~~~~g 128 (247)
.-+++...+++..++......+|+|-+||+|...+...+.+.. ...++|+|+++..+..|+-|+--.|
T Consensus 199 fyTP~~Vv~lmv~l~~p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg 278 (530)
T 3ufb_A 199 FYTPRPVVRFMVEVMDPQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHG 278 (530)
T ss_dssp CCCCHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHT
T ss_pred ECCcHHHHHHHHHhhccCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcC
Confidence 3456777888888887777789999999999988776654421 2469999999999999999988888
Q ss_pred CCCcEEEEEecchhhhHHHHhhhcCCCceeEEEEcCCcc-------------------chHHHHHHHHhcCC-------C
Q 025824 129 VAHKIDFREGPALPVLDLLIQDEKNHGSFDFIFVDADKD-------------------NYLNYHKRLIELVK-------V 182 (247)
Q Consensus 129 ~~~~i~~~~gd~~~~l~~l~~~~~~~~~fD~v~id~~~~-------------------~~~~~l~~~~~~L~-------~ 182 (247)
.. ...+..+|.......- .....+||+|+.+.+.. ....++..+...|+ +
T Consensus 279 ~~-~~~I~~~dtL~~~~~~---~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~ 354 (530)
T 3ufb_A 279 LE-YPRIDPENSLRFPLRE---MGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDN 354 (530)
T ss_dssp CS-CCEEECSCTTCSCGGG---CCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSS
T ss_pred Cc-cccccccccccCchhh---hcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCC
Confidence 74 3567788876431110 00135799999887621 11245666777776 6
Q ss_pred CeEEEE
Q 025824 183 GGVIGY 188 (247)
Q Consensus 183 gG~lv~ 188 (247)
||.+.+
T Consensus 355 gGr~av 360 (530)
T 3ufb_A 355 GGRAAV 360 (530)
T ss_dssp CCEEEE
T ss_pred CceEEE
Confidence 887654
No 294
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=97.76 E-value=1.5e-05 Score=65.47 Aligned_cols=94 Identities=11% Similarity=0.051 Sum_probs=60.3
Q ss_pred cCCCEEEEEcccccHHHHHHHhh--CCC-CCEEEEEeC--CcchHHHHHHHHHHcCCCCcEEEEEe-cchhhhHHHHhhh
Q 025824 78 VNAKNTMEIGVYTGYSLLATALA--LPD-DGKILAMDI--NRENYELGLPVIQKAGVAHKIDFREG-PALPVLDLLIQDE 151 (247)
Q Consensus 78 ~~~~~vLEiG~g~G~st~~la~~--~~~-~~~v~~iD~--~~~~~~~a~~~~~~~g~~~~i~~~~g-d~~~~l~~l~~~~ 151 (247)
.+..+|||+||+.|.++...++. ... .+.++++|. .|-.. + ..|+ +-++|..| |..+.
T Consensus 72 kpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~~~~P~~~------~-~~Gv-~~i~~~~G~Df~~~-------- 135 (269)
T 2px2_A 72 QPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPGHEEPMLM------Q-SYGW-NIVTMKSGVDVFYK-------- 135 (269)
T ss_dssp CCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTTSCCCCCC------C-STTG-GGEEEECSCCGGGS--------
T ss_pred CCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEccccccCCCcc------c-CCCc-eEEEeeccCCccCC--------
Confidence 34569999999999999998886 321 256666663 22100 0 0122 22466667 88752
Q ss_pred cCCCceeEEEEcCCcc---------chHHHHHHHHhcCCCCe-EEEE
Q 025824 152 KNHGSFDFIFVDADKD---------NYLNYHKRLIELVKVGG-VIGY 188 (247)
Q Consensus 152 ~~~~~fD~v~id~~~~---------~~~~~l~~~~~~L~~gG-~lv~ 188 (247)
...++|+|++|..+. .....++.+.+.|+||| .+++
T Consensus 136 -~~~~~DvVLSDMAPnSG~~~vD~~Rs~~aL~~A~~~Lk~gG~~Fvv 181 (269)
T 2px2_A 136 -PSEISDTLLCDIGESSPSAEIEEQRTLRILEMVSDWLSRGPKEFCI 181 (269)
T ss_dssp -CCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEE
T ss_pred -CCCCCCEEEeCCCCCCCccHHHHHHHHHHHHHHHHHhhcCCcEEEE
Confidence 145899999997521 11225666778999999 8887
No 295
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=97.65 E-value=1.5e-05 Score=66.26 Aligned_cols=101 Identities=12% Similarity=0.016 Sum_probs=62.6
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCce
Q 025824 78 VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSF 157 (247)
Q Consensus 78 ~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~f 157 (247)
.+..+|||+|||.|.++...+...+ ...++++|+.......+... ...+ .++.....+. +. ..+ ..+++
T Consensus 89 k~~~~VLDLGaAPGGWsQvAa~~~g-v~sV~GvdvG~d~~~~pi~~-~~~g--~~ii~~~~~~-dv-~~l-----~~~~~ 157 (282)
T 3gcz_A 89 KPTGIVVDLGCGRGGWSYYAASLKN-VKKVMAFTLGVQGHEKPIMR-TTLG--WNLIRFKDKT-DV-FNM-----EVIPG 157 (282)
T ss_dssp CCCEEEEEETCTTCHHHHHHHTSTT-EEEEEEECCCCTTSCCCCCC-CBTT--GGGEEEECSC-CG-GGS-----CCCCC
T ss_pred CCCCEEEEeCCCCCHHHHHHHHhcC-CCeeeeEEeccCcccccccc-ccCC--CceEEeeCCc-ch-hhc-----CCCCc
Confidence 4556899999999999999887654 56789999975422111100 0111 1333333332 22 122 25789
Q ss_pred eEEEEcCCcc-------c--hHHHHHHHHhcCCCC--eEEEEe
Q 025824 158 DFIFVDADKD-------N--YLNYHKRLIELVKVG--GVIGYD 189 (247)
Q Consensus 158 D~v~id~~~~-------~--~~~~l~~~~~~L~~g--G~lv~d 189 (247)
|+|+.|.... + ....++.+...|+|| |.+|+-
T Consensus 158 DvVLSDmApnsG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~K 200 (282)
T 3gcz_A 158 DTLLCDIGESSPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIK 200 (282)
T ss_dssp SEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
T ss_pred CEEEecCccCCCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEE
Confidence 9999997632 1 123466667899999 999984
No 296
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.58 E-value=0.00023 Score=60.11 Aligned_cols=57 Identities=14% Similarity=0.158 Sum_probs=45.7
Q ss_pred HHHHHHHhh--cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcC
Q 025824 69 QFLNMLLKL--VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAG 128 (247)
Q Consensus 69 ~~l~~l~~~--~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g 128 (247)
+++..++.. .+...|||++||+|..++.++.. +.+++++|+++++++.|++++....
T Consensus 223 ~l~~~~i~~~~~~~~~vlD~f~GsGt~~~~a~~~---g~~~~g~e~~~~~~~~a~~r~~~~~ 281 (297)
T 2zig_A 223 ELAERLVRMFSFVGDVVLDPFAGTGTTLIAAARW---GRRALGVELVPRYAQLAKERFAREV 281 (297)
T ss_dssp HHHHHHHHHHCCTTCEEEETTCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHhCCCCCEEEECCCCCCHHHHHHHHc---CCeEEEEeCCHHHHHHHHHHHHHhc
Confidence 344444433 45679999999999999887764 5699999999999999999998764
No 297
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=97.55 E-value=0.00021 Score=61.87 Aligned_cols=59 Identities=3% Similarity=-0.066 Sum_probs=49.5
Q ss_pred CCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhh
Q 025824 80 AKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPV 143 (247)
Q Consensus 80 ~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~ 143 (247)
...|||||.|.|..|..|++... ..+|+++|+++.++...++.+ . .++++++.+|+.+.
T Consensus 59 ~~~VlEIGPG~G~LT~~Ll~~~~-~~~vvavE~D~~l~~~L~~~~-~---~~~l~ii~~D~l~~ 117 (353)
T 1i4w_A 59 ELKVLDLYPGVGIQSAIFYNKYC-PRQYSLLEKRSSLYKFLNAKF-E---GSPLQILKRDPYDW 117 (353)
T ss_dssp TCEEEEESCTTCHHHHHHHHHHC-CSEEEEECCCHHHHHHHHHHT-T---TSSCEEECSCTTCH
T ss_pred CCEEEEECCCCCHHHHHHHhhCC-CCEEEEEecCHHHHHHHHHhc-c---CCCEEEEECCccch
Confidence 47899999999999999998642 368999999999988887765 2 25899999999765
No 298
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=97.54 E-value=0.00011 Score=61.46 Aligned_cols=101 Identities=12% Similarity=0.108 Sum_probs=61.1
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCce
Q 025824 78 VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSF 157 (247)
Q Consensus 78 ~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~f 157 (247)
.+..+|||+||++|.++..+++..+ ...|+++|+.......... ....+. +-+.+. ... +.. .+ ..+++
T Consensus 80 ~~g~~vlDLGaaPGgWsqva~~~~g-v~sV~Gvdlg~~~~~~P~~-~~~~~~-~iv~~~-~~~-di~-~l-----~~~~~ 148 (300)
T 3eld_A 80 RITGRVLDLGCGRGGWSYYAAAQKE-VMSVKGYTLGIEGHEKPIH-MQTLGW-NIVKFK-DKS-NVF-TM-----PTEPS 148 (300)
T ss_dssp CCCEEEEEETCTTCHHHHHHHTSTT-EEEEEEECCCCTTSCCCCC-CCBTTG-GGEEEE-CSC-CTT-TS-----CCCCC
T ss_pred CCCCEEEEcCCCCCHHHHHHHHhcC-CceeeeEEecccccccccc-ccccCC-ceEEee-cCc-eee-ec-----CCCCc
Confidence 3457899999999999999997654 4578899986532100000 000011 123332 221 221 12 25789
Q ss_pred eEEEEcCCcc-------c--hHHHHHHHHhcCCCC-eEEEEe
Q 025824 158 DFIFVDADKD-------N--YLNYHKRLIELVKVG-GVIGYD 189 (247)
Q Consensus 158 D~v~id~~~~-------~--~~~~l~~~~~~L~~g-G~lv~d 189 (247)
|+|+.|..+. . ....++.+...|+|| |.+|+-
T Consensus 149 DlVlsD~APnsG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~K 190 (300)
T 3eld_A 149 DTLLCDIGESSSNPLVERDRTMKVLENFERWKHVNTENFCVK 190 (300)
T ss_dssp SEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEE
T ss_pred CEEeecCcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEE
Confidence 9999997633 1 123466667899999 999985
No 299
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.45 E-value=0.00074 Score=54.71 Aligned_cols=98 Identities=10% Similarity=0.039 Sum_probs=65.8
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEe-cchhhhHHHHhhhcCCCc
Q 025824 78 VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREG-PALPVLDLLIQDEKNHGS 156 (247)
Q Consensus 78 ~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~g-d~~~~l~~l~~~~~~~~~ 156 (247)
.+..+|||+||++|.++.+.+.... ..+|+++|+-+.-.+. -..++..|. +.|+|..+ |.... + ..+
T Consensus 77 ~~g~~VvDLGaapGGWSq~~a~~~g-~~~V~avdvG~~ghe~-P~~~~s~gw-n~v~fk~gvDv~~~-~--------~~~ 144 (267)
T 3p8z_A 77 IPEGRVIDLGCGRGGWSYYCAGLKK-VTEVRGYTKGGPGHEE-PVPMSTYGW-NIVKLMSGKDVFYL-P--------PEK 144 (267)
T ss_dssp CCCEEEEEESCTTSHHHHHHHTSTT-EEEEEEECCCSTTSCC-CCCCCCTTT-TSEEEECSCCGGGC-C--------CCC
T ss_pred CCCCEEEEcCCCCCcHHHHHHHhcC-CCEEEEEecCCCCccC-cchhhhcCc-CceEEEeccceeec-C--------Ccc
Confidence 4556899999999999998887654 4589999997652210 001123344 56999998 76322 2 467
Q ss_pred eeEEEEcCCcc---------chHHHHHHHHhcCCCCeEEEE
Q 025824 157 FDFIFVDADKD---------NYLNYHKRLIELVKVGGVIGY 188 (247)
Q Consensus 157 fD~v~id~~~~---------~~~~~l~~~~~~L~~gG~lv~ 188 (247)
+|.|++|.... .....++.+.+.|++ |-+++
T Consensus 145 ~DtllcDIgeSs~~~~vE~~RtlrvLela~~wL~~-~~fc~ 184 (267)
T 3p8z_A 145 CDTLLCDIGESSPSPTVEESRTIRVLKMVEPWLKN-NQFCI 184 (267)
T ss_dssp CSEEEECCCCCCSCHHHHHHHHHHHHHHHGGGCSS-CEEEE
T ss_pred ccEEEEecCCCCCChhhhhhHHHHHHHHHHHhccc-CCEEE
Confidence 99999997522 223456666788988 66665
No 300
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=97.44 E-value=0.00063 Score=56.87 Aligned_cols=88 Identities=18% Similarity=0.220 Sum_probs=60.2
Q ss_pred CCCEEEEEcc------cccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhc
Q 025824 79 NAKNTMEIGV------YTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEK 152 (247)
Q Consensus 79 ~~~~vLEiG~------g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~ 152 (247)
...+|||+|+ ..|. ..+.+..|.++.|+++|+.+-. ...+ .+++||..+...
T Consensus 109 ~gmrVLDLGA~s~kg~APGS--~VLr~~~p~g~~VVavDL~~~~-----------sda~--~~IqGD~~~~~~------- 166 (344)
T 3r24_A 109 YNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDFV-----------SDAD--STLIGDCATVHT------- 166 (344)
T ss_dssp TTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCCB-----------CSSS--EEEESCGGGEEE-------
T ss_pred CCCEEEeCCCCCCCCCCCcH--HHHHHhCCCCcEEEEeeCcccc-----------cCCC--eEEEcccccccc-------
Confidence 3579999995 6776 3444456645799999999852 1112 448999765322
Q ss_pred CCCceeEEEEcCCc--------cc------hHHHHHHHHhcCCCCeEEEEe
Q 025824 153 NHGSFDFIFVDADK--------DN------YLNYHKRLIELVKVGGVIGYD 189 (247)
Q Consensus 153 ~~~~fD~v~id~~~--------~~------~~~~l~~~~~~L~~gG~lv~d 189 (247)
..+||+|+.|..+ .+ ....++.+...|+|||.+++-
T Consensus 167 -~~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVK 216 (344)
T 3r24_A 167 -ANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVK 216 (344)
T ss_dssp -SSCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred -CCCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEE
Confidence 4789999998541 11 234556667899999999986
No 301
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=97.35 E-value=0.00069 Score=63.52 Aligned_cols=108 Identities=16% Similarity=0.083 Sum_probs=71.1
Q ss_pred CCEEEEEcccccHHHHHHHhhC-------CC----CCEEEEEeCCcchHHHH--------------HHHHHHcCC-----
Q 025824 80 AKNTMEIGVYTGYSLLATALAL-------PD----DGKILAMDINRENYELG--------------LPVIQKAGV----- 129 (247)
Q Consensus 80 ~~~vLEiG~g~G~st~~la~~~-------~~----~~~v~~iD~~~~~~~~a--------------~~~~~~~g~----- 129 (247)
.-+|+|+|-|+|+..+...... |. .-+++++|..|-..+.. ++.+.....
T Consensus 67 ~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 146 (676)
T 3ps9_A 67 LFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGC 146 (676)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSEE
T ss_pred ceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCCc
Confidence 3489999999999887655442 11 24689999944333222 233322211
Q ss_pred -----C---CcEEEEEecchhhhHHHHhhhcCCCceeEEEEcCCcc------chHHHHHHHHhcCCCCeEEEEe
Q 025824 130 -----A---HKIDFREGPALPVLDLLIQDEKNHGSFDFIFVDADKD------NYLNYHKRLIELVKVGGVIGYD 189 (247)
Q Consensus 130 -----~---~~i~~~~gd~~~~l~~l~~~~~~~~~fD~v~id~~~~------~~~~~l~~~~~~L~~gG~lv~d 189 (247)
. -++++..||+.+.++.+... ....||.+|+|+... ...++|..+.++++|||.+...
T Consensus 147 ~~~~~~~~~~~l~l~~gd~~~~l~~~~~~--~~~~~d~~~~D~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~ 218 (676)
T 3ps9_A 147 HRLLLDAGRVTLDLWFGDINELTSQLDDS--LNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATF 218 (676)
T ss_dssp EEEEEGGGTEEEEEEESCHHHHGGGBCGG--GTTCEEEEEECCSCGGGCGGGSCHHHHHHHHHHEEEEEEEEES
T ss_pred eEEEecCCcEEEEEecCCHHHHHHhcccc--cCCcccEEEECCCCCcCChhhhhHHHHHHHHHHhCCCCEEEec
Confidence 0 23567889999888876211 136799999998621 1367889999999999999854
No 302
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=97.22 E-value=0.0016 Score=54.49 Aligned_cols=99 Identities=10% Similarity=0.079 Sum_probs=63.7
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEe-cchhhhHHHHhhhcCCCc
Q 025824 78 VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREG-PALPVLDLLIQDEKNHGS 156 (247)
Q Consensus 78 ~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~g-d~~~~l~~l~~~~~~~~~ 156 (247)
.+..+|||+||++|.++.+.+...+ ..+|+++|+-..-.+. -..++..+. +-|.+..+ |.... + ..+
T Consensus 93 ~~~~~VlDLGaapGGwsq~~~~~~g-v~~V~avdvG~~~he~-P~~~~ql~w-~lV~~~~~~Dv~~l-~--------~~~ 160 (321)
T 3lkz_A 93 EPVGKVIDLGCGRGGWCYYMATQKR-VQEVRGYTKGGPGHEE-PQLVQSYGW-NIVTMKSGVDVFYR-P--------SEC 160 (321)
T ss_dssp CCCEEEEEETCTTCHHHHHHTTCTT-EEEEEEECCCSTTSCC-CCCCCBTTG-GGEEEECSCCTTSS-C--------CCC
T ss_pred CCCCEEEEeCCCCCcHHHHHHhhcC-CCEEEEEEcCCCCccC-cchhhhcCC-cceEEEeccCHhhC-C--------CCC
Confidence 3456899999999999998776543 3579999997651100 000012222 23778777 65332 2 367
Q ss_pred eeEEEEcCCcc---------chHHHHHHHHhcCCCC-eEEEE
Q 025824 157 FDFIFVDADKD---------NYLNYHKRLIELVKVG-GVIGY 188 (247)
Q Consensus 157 fD~v~id~~~~---------~~~~~l~~~~~~L~~g-G~lv~ 188 (247)
+|+|++|.... .....|+.+.+.|++| |-+++
T Consensus 161 ~D~ivcDigeSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~ 202 (321)
T 3lkz_A 161 CDTLLCDIGESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCV 202 (321)
T ss_dssp CSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEE
T ss_pred CCEEEEECccCCCChhhhhhHHHHHHHHHHHHhccCCCcEEE
Confidence 99999997521 2233566667888888 78877
No 303
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=97.03 E-value=0.0015 Score=57.65 Aligned_cols=49 Identities=14% Similarity=0.214 Sum_probs=43.0
Q ss_pred cCCCEEEEEcccccHHHHHHH-hhCCCCCEEEEEeCCcchHHHHHHHHHH
Q 025824 78 VNAKNTMEIGVYTGYSLLATA-LALPDDGKILAMDINRENYELGLPVIQK 126 (247)
Q Consensus 78 ~~~~~vLEiG~g~G~st~~la-~~~~~~~~v~~iD~~~~~~~~a~~~~~~ 126 (247)
.+...|+|||++.|..++.++ ...++.++|+++|++|...+..+++++.
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~ 274 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRR 274 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHh
Confidence 456789999999999999988 4555458999999999999999999987
No 304
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=97.02 E-value=0.0026 Score=55.59 Aligned_cols=78 Identities=13% Similarity=0.032 Sum_probs=47.3
Q ss_pred CCEEEEEcccccHHHHHHHhh-------------C---CCCCEEEEEeCC-----------cchHHHHHHHHHHcCCCCc
Q 025824 80 AKNTMEIGVYTGYSLLATALA-------------L---PDDGKILAMDIN-----------RENYELGLPVIQKAGVAHK 132 (247)
Q Consensus 80 ~~~vLEiG~g~G~st~~la~~-------------~---~~~~~v~~iD~~-----------~~~~~~a~~~~~~~g~~~~ 132 (247)
+-+|+|+||++|..|+.+... . ++..+|+.-|+. +.+.+.. -+..|...+
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~---~~~~g~~~~ 129 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNL---EKENGRKIG 129 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHH---HHHTCCCTT
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhh---hhhccCCCC
Confidence 568999999999999987765 1 235678888876 2222221 112232123
Q ss_pred EEEEEecchhhhHHHHhhhcCCCceeEEEEcC
Q 025824 133 IDFREGPALPVLDLLIQDEKNHGSFDFIFVDA 164 (247)
Q Consensus 133 i~~~~gd~~~~l~~l~~~~~~~~~fD~v~id~ 164 (247)
-.|+.|..-.+-.++. +.+++|+||...
T Consensus 130 ~~f~~gvpgSFy~rlf----p~~S~d~v~Ss~ 157 (384)
T 2efj_A 130 SCLIGAMPGSFYSRLF----PEESMHFLHSCY 157 (384)
T ss_dssp SEEEEECCSCTTSCCS----CTTCEEEEEEES
T ss_pred ceEEEecchhhhhccC----CCCceEEEEecc
Confidence 4666666554433332 368999999753
No 305
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=97.02 E-value=0.0085 Score=45.18 Aligned_cols=114 Identities=10% Similarity=0.116 Sum_probs=75.8
Q ss_pred HHHHHHhhcC--CCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHH
Q 025824 70 FLNMLLKLVN--AKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLL 147 (247)
Q Consensus 70 ~l~~l~~~~~--~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l 147 (247)
.|.+.+.... +.-|||+|-|.|..=-+|.+.+| +-+|+.+|..-... .....+.=.++.||+.+.++..
T Consensus 29 ~L~~a~~~v~~~~GpVlElGLGNGRTydHLRe~~P-~R~I~vfDR~~~~h--------p~~~P~~e~~ilGdi~~tL~~~ 99 (174)
T 3iht_A 29 CLEHAIAQTAGLSGPVYELGLGNGRTYHHLRQHVQ-GREIYVFERAVASH--------PDSTPPEAQLILGDIRETLPAT 99 (174)
T ss_dssp HHHHHHHHTTTCCSCEEEECCTTCHHHHHHHHHCC-SSCEEEEESSCCCC--------GGGCCCGGGEEESCHHHHHHHH
T ss_pred HHHHHHHHhcCCCCceEEecCCCChhHHHHHHhCC-CCcEEEEEeeeccC--------CCCCCchHheecccHHHHHHHH
Confidence 3444444333 45699999999999999999998 88999999854311 0112234578999999998875
Q ss_pred HhhhcCCCceeEEEEcCCccch---HHHH----HHHHhcCCCCeEEEEeccccc
Q 025824 148 IQDEKNHGSFDFIFVDADKDNY---LNYH----KRLIELVKVGGVIGYDNTLWN 194 (247)
Q Consensus 148 ~~~~~~~~~fD~v~id~~~~~~---~~~l----~~~~~~L~~gG~lv~d~~~~~ 194 (247)
.+.- ..+.-++..|..-.+. .... ..+.++|.|||+++.+.-++.
T Consensus 100 ~~r~--g~~a~LaHaD~G~g~~~~d~a~a~~lsplI~~~la~GGi~vS~~pl~~ 151 (174)
T 3iht_A 100 LERF--GATASLVHADLGGHNREKNDRFARLISPLIEPHLAQGGLMVSSDRMYF 151 (174)
T ss_dssp HHHH--CSCEEEEEECCCCSCHHHHHHHHHHHHHHHGGGEEEEEEEEESSCCCC
T ss_pred HHhc--CCceEEEEeecCCCCcchhHHHHHhhhHHHHHHhcCCcEEEeCCccCC
Confidence 3321 3567777777552222 1122 333479999999998777643
No 306
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=96.92 E-value=0.0013 Score=57.41 Aligned_cols=37 Identities=11% Similarity=0.202 Sum_probs=27.2
Q ss_pred CCEEEEEcccccHHHHHHHhh--------C------CCCCEEEEEeCCcch
Q 025824 80 AKNTMEIGVYTGYSLLATALA--------L------PDDGKILAMDINREN 116 (247)
Q Consensus 80 ~~~vLEiG~g~G~st~~la~~--------~------~~~~~v~~iD~~~~~ 116 (247)
+.+|+|+||++|..|+.+... . ++..+|+.-|+...-
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~ND 103 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSND 103 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSC
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccc
Confidence 568999999999999887321 1 246788888876543
No 307
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=96.83 E-value=0.0027 Score=54.69 Aligned_cols=76 Identities=14% Similarity=0.022 Sum_probs=55.8
Q ss_pred CCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCceeE
Q 025824 80 AKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDF 159 (247)
Q Consensus 80 ~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~fD~ 159 (247)
+.+|+|+.||+|..++.+.++--+-..++++|+++..++..+.|+.. ..++.+|..+....... ...+|+
T Consensus 2 ~~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~~------~~~~~~Di~~~~~~~~~----~~~~D~ 71 (343)
T 1g55_A 2 PLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPH------TQLLAKTIEGITLEEFD----RLSFDM 71 (343)
T ss_dssp CEEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTT------SCEECSCGGGCCHHHHH----HHCCSE
T ss_pred CCeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhccc------cccccCCHHHccHhHcC----cCCcCE
Confidence 45899999999999999887621013699999999998888888642 34678888776543211 126999
Q ss_pred EEEcCC
Q 025824 160 IFVDAD 165 (247)
Q Consensus 160 v~id~~ 165 (247)
|+.+.+
T Consensus 72 l~~gpP 77 (343)
T 1g55_A 72 ILMSPP 77 (343)
T ss_dssp EEECCC
T ss_pred EEEcCC
Confidence 999876
No 308
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=96.79 E-value=0.0022 Score=55.50 Aligned_cols=102 Identities=18% Similarity=0.192 Sum_probs=65.1
Q ss_pred hcCCCEEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCC
Q 025824 77 LVNAKNTMEIGVYT-GYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHG 155 (247)
Q Consensus 77 ~~~~~~vLEiG~g~-G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~ 155 (247)
..+.++||-+|+|. |..++.+++.+. ..+|+++|.+++..+.+++ .|.. .++..+..+....+... ..+
T Consensus 188 ~~~g~~VlV~GaG~vG~~a~qlak~~G-a~~Vi~~~~~~~~~~~a~~----lGa~---~vi~~~~~~~~~~~~~~--~~g 257 (371)
T 1f8f_A 188 VTPASSFVTWGAGAVGLSALLAAKVCG-ASIIIAVDIVESRLELAKQ----LGAT---HVINSKTQDPVAAIKEI--TDG 257 (371)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHHT-CSEEEEEESCHHHHHHHHH----HTCS---EEEETTTSCHHHHHHHH--TTS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEECCCHHHHHHHHH----cCCC---EEecCCccCHHHHHHHh--cCC
Confidence 34567999999875 777788888763 2379999999988777654 4542 22222211222222111 123
Q ss_pred ceeEEEEcCCccchHHHHHHHHhcCCCCeEEEEecc
Q 025824 156 SFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYDNT 191 (247)
Q Consensus 156 ~fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv~d~~ 191 (247)
.+|+||-... ....++.+.+.|+++|.++.-..
T Consensus 258 g~D~vid~~g---~~~~~~~~~~~l~~~G~iv~~G~ 290 (371)
T 1f8f_A 258 GVNFALESTG---SPEILKQGVDALGILGKIAVVGA 290 (371)
T ss_dssp CEEEEEECSC---CHHHHHHHHHTEEEEEEEEECCC
T ss_pred CCcEEEECCC---CHHHHHHHHHHHhcCCEEEEeCC
Confidence 7998874332 24567888899999999987443
No 309
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=96.77 E-value=0.003 Score=52.11 Aligned_cols=58 Identities=9% Similarity=0.154 Sum_probs=43.8
Q ss_pred HHHHHHHhh--cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCC
Q 025824 69 QFLNMLLKL--VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGV 129 (247)
Q Consensus 69 ~~l~~l~~~--~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~ 129 (247)
.++..++.. .+...|||..||+|..++...+. +.+++++|+++..++.|+++++..++
T Consensus 200 ~l~~~~i~~~~~~~~~vlD~f~GsGtt~~~a~~~---gr~~ig~e~~~~~~~~~~~r~~~~~~ 259 (260)
T 1g60_A 200 DLIERIIRASSNPNDLVLDCFMGSGTTAIVAKKL---GRNFIGCDMNAEYVNQANFVLNQLEI 259 (260)
T ss_dssp HHHHHHHHHHCCTTCEEEESSCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHhCCCCCEEEECCCCCCHHHHHHHHc---CCeEEEEeCCHHHHHHHHHHHHhccC
Confidence 344444433 45679999999999998876654 46999999999999999999987653
No 310
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=96.76 E-value=0.00048 Score=59.67 Aligned_cols=108 Identities=12% Similarity=0.129 Sum_probs=66.9
Q ss_pred CCEEEEEcccccHHHHHHHhh---------------CCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhh
Q 025824 80 AKNTMEIGVYTGYSLLATALA---------------LPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVL 144 (247)
Q Consensus 80 ~~~vLEiG~g~G~st~~la~~---------------~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l 144 (247)
+-+|+|+||++|..|+.+... -++..+|+.-|+...-....-+.+.......+-.++.|..-.+-
T Consensus 52 ~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSFy 131 (359)
T 1m6e_X 52 RLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSFY 131 (359)
T ss_dssp EECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCSS
T ss_pred ceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhhh
Confidence 457899999999998876654 23467899999987765555444432110012355555443332
Q ss_pred HHHHhhhcCCCceeEEEEcCC-------c-c----------------------------chHHHHHHHHhcCCCCeEEEE
Q 025824 145 DLLIQDEKNHGSFDFIFVDAD-------K-D----------------------------NYLNYHKRLIELVKVGGVIGY 188 (247)
Q Consensus 145 ~~l~~~~~~~~~fD~v~id~~-------~-~----------------------------~~~~~l~~~~~~L~~gG~lv~ 188 (247)
.++. +.+++|+||.... + . +...+++...+.|+|||.+++
T Consensus 132 ~rlf----p~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl 207 (359)
T 1m6e_X 132 GRLF----PRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVL 207 (359)
T ss_dssp SCCS----CTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEE
T ss_pred hccC----CCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEE
Confidence 3332 3689999986532 0 0 112345666789999999997
Q ss_pred ecc
Q 025824 189 DNT 191 (247)
Q Consensus 189 d~~ 191 (247)
.-.
T Consensus 208 ~~~ 210 (359)
T 1m6e_X 208 TIL 210 (359)
T ss_dssp EEE
T ss_pred EEe
Confidence 543
No 311
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=96.73 E-value=0.0054 Score=53.48 Aligned_cols=101 Identities=15% Similarity=0.004 Sum_probs=67.8
Q ss_pred CEEEEEcccccHHHHHHHhhCCCCC-EEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHH-hhhcCCCcee
Q 025824 81 KNTMEIGVYTGYSLLATALALPDDG-KILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLI-QDEKNHGSFD 158 (247)
Q Consensus 81 ~~vLEiG~g~G~st~~la~~~~~~~-~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~-~~~~~~~~fD 158 (247)
.+++|+.||+|..++-+.++ +. .+.++|+++..++..+.|+. ...++++|..+....-. ........+|
T Consensus 3 ~~vidLFsG~GGlslG~~~a---G~~~v~avE~d~~a~~t~~~N~~------~~~~~~~DI~~~~~~~~~~~~~~~~~~D 73 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARA---GFDVKMAVEIDQHAINTHAINFP------RSLHVQEDVSLLNAEIIKGFFKNDMPID 73 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHH---TCEEEEEECSCHHHHHHHHHHCT------TSEEECCCGGGCCHHHHHHHHCSCCCCC
T ss_pred CeEEEEccCcCHHHHHHHHC---CCcEEEEEeCCHHHHHHHHHhCC------CCceEecChhhcCHHHHHhhcccCCCee
Confidence 57999999999999988876 34 56799999998887777653 35778899877643211 1000135799
Q ss_pred EEEEcCCccch---------------HHHHHHHHhcCCCCeEEEEecc
Q 025824 159 FIFVDADKDNY---------------LNYHKRLIELVKVGGVIGYDNT 191 (247)
Q Consensus 159 ~v~id~~~~~~---------------~~~l~~~~~~L~~gG~lv~d~~ 191 (247)
+|+.+.++..+ ...+-.+...++|. ++++.||
T Consensus 74 ~i~ggpPCQ~fS~ag~~~~~d~r~~L~~~~~~~v~~~~P~-~~v~ENV 120 (376)
T 3g7u_A 74 GIIGGPPCQGFSSIGKGNPDDSRNQLYMHFYRLVSELQPL-FFLAENV 120 (376)
T ss_dssp EEEECCCCCTTC-------CHHHHHHHHHHHHHHHHHCCS-EEEEEEC
T ss_pred EEEecCCCCCcccccCCCCCCchHHHHHHHHHHHHHhCCC-EEEEecc
Confidence 99998763221 11222334567885 6667887
No 312
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=96.71 E-value=0.0028 Score=54.14 Aligned_cols=100 Identities=18% Similarity=0.173 Sum_probs=66.9
Q ss_pred hhcCCCEEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCC
Q 025824 76 KLVNAKNTMEIGVYT-GYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNH 154 (247)
Q Consensus 76 ~~~~~~~vLEiG~g~-G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~ 154 (247)
...+.++||-+|+|. |..++.+++.. +.+|++++.+++..+.+++ .|.. .++.....+....+... .
T Consensus 163 ~~~~g~~VlV~GaG~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~----lGa~---~~i~~~~~~~~~~~~~~---~ 230 (340)
T 3s2e_A 163 DTRPGQWVVISGIGGLGHVAVQYARAM--GLRVAAVDIDDAKLNLARR----LGAE---VAVNARDTDPAAWLQKE---I 230 (340)
T ss_dssp TCCTTSEEEEECCSTTHHHHHHHHHHT--TCEEEEEESCHHHHHHHHH----TTCS---EEEETTTSCHHHHHHHH---H
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHH----cCCC---EEEeCCCcCHHHHHHHh---C
Confidence 344667899999874 88888888876 4699999999987776644 5642 22222222222333221 2
Q ss_pred CceeEEEEcCCccchHHHHHHHHhcCCCCeEEEEec
Q 025824 155 GSFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYDN 190 (247)
Q Consensus 155 ~~fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv~d~ 190 (247)
+.+|.||.... ....++.+.+.|+++|.++.-.
T Consensus 231 g~~d~vid~~g---~~~~~~~~~~~l~~~G~iv~~G 263 (340)
T 3s2e_A 231 GGAHGVLVTAV---SPKAFSQAIGMVRRGGTIALNG 263 (340)
T ss_dssp SSEEEEEESSC---CHHHHHHHHHHEEEEEEEEECS
T ss_pred CCCCEEEEeCC---CHHHHHHHHHHhccCCEEEEeC
Confidence 47999876543 2456788889999999998753
No 313
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=96.65 E-value=0.0016 Score=51.03 Aligned_cols=99 Identities=12% Similarity=0.123 Sum_probs=60.7
Q ss_pred hcCCCEEEEEcc--cccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCC
Q 025824 77 LVNAKNTMEIGV--YTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNH 154 (247)
Q Consensus 77 ~~~~~~vLEiG~--g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~ 154 (247)
..+.++||.+|+ |.|..+..++... +.+|++++.+++..+.++ ..|.. . +...+..+....+.... ..
T Consensus 36 ~~~g~~vlV~Ga~ggiG~~~~~~~~~~--G~~V~~~~~~~~~~~~~~----~~g~~--~-~~d~~~~~~~~~~~~~~-~~ 105 (198)
T 1pqw_A 36 LSPGERVLIHSATGGVGMAAVSIAKMI--GARIYTTAGSDAKREMLS----RLGVE--Y-VGDSRSVDFADEILELT-DG 105 (198)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHH--TCEEEEEESSHHHHHHHH----TTCCS--E-EEETTCSTHHHHHHHHT-TT
T ss_pred CCCCCEEEEeeCCChHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHH----HcCCC--E-EeeCCcHHHHHHHHHHh-CC
Confidence 345679999994 5566666666654 579999999988665543 34542 1 22111112222222111 12
Q ss_pred CceeEEEEcCCccchHHHHHHHHhcCCCCeEEEEe
Q 025824 155 GSFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYD 189 (247)
Q Consensus 155 ~~fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv~d 189 (247)
..+|++|.... ...++.+.+.|++||.++.-
T Consensus 106 ~~~D~vi~~~g----~~~~~~~~~~l~~~G~~v~~ 136 (198)
T 1pqw_A 106 YGVDVVLNSLA----GEAIQRGVQILAPGGRFIEL 136 (198)
T ss_dssp CCEEEEEECCC----THHHHHHHHTEEEEEEEEEC
T ss_pred CCCeEEEECCc----hHHHHHHHHHhccCCEEEEE
Confidence 46999985543 25678888999999999864
No 314
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=96.61 E-value=0.009 Score=51.37 Aligned_cols=103 Identities=10% Similarity=0.004 Sum_probs=65.9
Q ss_pred HhhcCCCEEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEec---chhhhHHHHhh
Q 025824 75 LKLVNAKNTMEIGVYT-GYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGP---ALPVLDLLIQD 150 (247)
Q Consensus 75 ~~~~~~~~vLEiG~g~-G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd---~~~~l~~l~~~ 150 (247)
....+..+||-+|+|. |..++.+++.+. ..+|+++|.+++..+.+++ .|.. .++..+ ..+....+...
T Consensus 167 ~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~~----lGa~---~vi~~~~~~~~~~~~~i~~~ 238 (356)
T 1pl8_A 167 GGVTLGHKVLVCGAGPIGMVTLLVAKAMG-AAQVVVTDLSATRLSKAKE----IGAD---LVLQISKESPQEIARKVEGQ 238 (356)
T ss_dssp HTCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEEESCHHHHHHHHH----TTCS---EEEECSSCCHHHHHHHHHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCHHHHHHHHH----hCCC---EEEcCcccccchHHHHHHHH
Confidence 3445678999999874 777788888763 2399999999987766643 5652 222222 12232333221
Q ss_pred hcCCCceeEEEEcCCccchHHHHHHHHhcCCCCeEEEEec
Q 025824 151 EKNHGSFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYDN 190 (247)
Q Consensus 151 ~~~~~~fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv~d~ 190 (247)
. ...+|+||-... ....++.+.+.|++||.++.-.
T Consensus 239 ~--~~g~D~vid~~g---~~~~~~~~~~~l~~~G~iv~~G 273 (356)
T 1pl8_A 239 L--GCKPEVTIECTG---AEASIQAGIYATRSGGTLVLVG 273 (356)
T ss_dssp H--TSCCSEEEECSC---CHHHHHHHHHHSCTTCEEEECS
T ss_pred h--CCCCCEEEECCC---ChHHHHHHHHHhcCCCEEEEEe
Confidence 1 257999874432 2345678889999999998643
No 315
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=96.55 E-value=0.0032 Score=55.15 Aligned_cols=106 Identities=21% Similarity=0.223 Sum_probs=65.9
Q ss_pred HhhcCCCEEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecc-hhhhHHHHhhhc
Q 025824 75 LKLVNAKNTMEIGVYT-GYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPA-LPVLDLLIQDEK 152 (247)
Q Consensus 75 ~~~~~~~~vLEiG~g~-G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~-~~~l~~l~~~~~ 152 (247)
+...+..+||-+|+|. |..++.+++... ..+|+++|.+++..+.++ ..|. +-+.....+. .+.+..+.
T Consensus 181 ~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~----~lGa-~~i~~~~~~~~~~~~~~~~---- 250 (398)
T 2dph_A 181 AGVKPGSHVYIAGAGPVGRCAAAGARLLG-AACVIVGDQNPERLKLLS----DAGF-ETIDLRNSAPLRDQIDQIL---- 250 (398)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHHT-CSEEEEEESCHHHHHHHH----TTTC-EEEETTSSSCHHHHHHHHH----
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCCHHHHHHHH----HcCC-cEEcCCCcchHHHHHHHHh----
Confidence 3445678999999875 778888888763 239999999998776654 3564 2111111122 22232221
Q ss_pred CCCceeEEEEcCCccc-----------hHHHHHHHHhcCCCCeEEEEec
Q 025824 153 NHGSFDFIFVDADKDN-----------YLNYHKRLIELVKVGGVIGYDN 190 (247)
Q Consensus 153 ~~~~fD~v~id~~~~~-----------~~~~l~~~~~~L~~gG~lv~d~ 190 (247)
....+|+||-...... ....++.+.+.|++||.+++-.
T Consensus 251 ~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G 299 (398)
T 2dph_A 251 GKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPG 299 (398)
T ss_dssp SSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCS
T ss_pred CCCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEec
Confidence 1237999874433221 1346788889999999998643
No 316
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=96.37 E-value=0.028 Score=47.91 Aligned_cols=103 Identities=15% Similarity=0.061 Sum_probs=66.0
Q ss_pred hhcCCCEEEEEccccc-HHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCC
Q 025824 76 KLVNAKNTMEIGVYTG-YSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNH 154 (247)
Q Consensus 76 ~~~~~~~vLEiG~g~G-~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~ 154 (247)
...+..+||-+|+|.+ ..+..+++... +.+|+++|.+++..+.++ ..|...-+.....|..+.+.++. ..
T Consensus 160 ~~~~g~~VlV~GaG~~g~~a~~~a~~~~-g~~Vi~~~~~~~r~~~~~----~~Ga~~~i~~~~~~~~~~v~~~t----~g 230 (348)
T 4eez_A 160 GVKPGDWQVIFGAGGLGNLAIQYAKNVF-GAKVIAVDINQDKLNLAK----KIGADVTINSGDVNPVDEIKKIT----GG 230 (348)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTS-CCEEEEEESCHHHHHHHH----HTTCSEEEEC-CCCHHHHHHHHT----TS
T ss_pred CCCCCCEEEEEcCCCccHHHHHHHHHhC-CCEEEEEECcHHHhhhhh----hcCCeEEEeCCCCCHHHHhhhhc----CC
Confidence 3455689999998754 34555666554 689999999998766554 45553223333333333333331 13
Q ss_pred CceeEEEEcCCccchHHHHHHHHhcCCCCeEEEEec
Q 025824 155 GSFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYDN 190 (247)
Q Consensus 155 ~~fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv~d~ 190 (247)
..+|.++.+... ...+....+.|+++|.++.-.
T Consensus 231 ~g~d~~~~~~~~---~~~~~~~~~~l~~~G~~v~~g 263 (348)
T 4eez_A 231 LGVQSAIVCAVA---RIAFEQAVASLKPMGKMVAVA 263 (348)
T ss_dssp SCEEEEEECCSC---HHHHHHHHHTEEEEEEEEECC
T ss_pred CCceEEEEeccC---cchhheeheeecCCceEEEEe
Confidence 468888776542 456788889999999998654
No 317
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=96.33 E-value=0.0056 Score=53.02 Aligned_cols=106 Identities=14% Similarity=0.085 Sum_probs=66.0
Q ss_pred HhhcCCCEEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhh-hc
Q 025824 75 LKLVNAKNTMEIGVYT-GYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQD-EK 152 (247)
Q Consensus 75 ~~~~~~~~vLEiG~g~-G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~-~~ 152 (247)
....+..+||-+|+|. |..++.+++... ..+|++++.+++..+.+++ .|.. .++.-...+....+... ..
T Consensus 178 ~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~~----lGa~---~vi~~~~~~~~~~i~~~~~~ 249 (370)
T 4ej6_A 178 SGIKAGSTVAILGGGVIGLLTVQLARLAG-ATTVILSTRQATKRRLAEE----VGAT---ATVDPSAGDVVEAIAGPVGL 249 (370)
T ss_dssp HTCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCHHHHHHHHH----HTCS---EEECTTSSCHHHHHHSTTSS
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCHHHHHHHHH----cCCC---EEECCCCcCHHHHHHhhhhc
Confidence 4445678999999864 667777888764 2399999999987776655 4652 12221112222222110 00
Q ss_pred CCCceeEEEEcCCccchHHHHHHHHhcCCCCeEEEEecc
Q 025824 153 NHGSFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYDNT 191 (247)
Q Consensus 153 ~~~~fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv~d~~ 191 (247)
..+.+|+||-... ....++.+.+.|++||.++.-..
T Consensus 250 ~~gg~Dvvid~~G---~~~~~~~~~~~l~~~G~vv~~G~ 285 (370)
T 4ej6_A 250 VPGGVDVVIECAG---VAETVKQSTRLAKAGGTVVILGV 285 (370)
T ss_dssp STTCEEEEEECSC---CHHHHHHHHHHEEEEEEEEECSC
T ss_pred cCCCCCEEEECCC---CHHHHHHHHHHhccCCEEEEEec
Confidence 1247998874332 24567888899999999997543
No 318
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=96.18 E-value=0.024 Score=48.56 Aligned_cols=104 Identities=12% Similarity=0.024 Sum_probs=64.7
Q ss_pred HhhcCCCEEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEec-chhhhHHHHhhhc
Q 025824 75 LKLVNAKNTMEIGVYT-GYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGP-ALPVLDLLIQDEK 152 (247)
Q Consensus 75 ~~~~~~~~vLEiG~g~-G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd-~~~~l~~l~~~~~ 152 (247)
....+.++||-+|+|. |..++.+++.+ +.+|++++.+++..+.++ ..|.. .++..+ ..+....+.....
T Consensus 164 ~~~~~g~~VlV~GaG~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~----~lGa~---~~~~~~~~~~~~~~i~~~~~ 234 (352)
T 1e3j_A 164 AGVQLGTTVLVIGAGPIGLVSVLAAKAY--GAFVVCTARSPRRLEVAK----NCGAD---VTLVVDPAKEEESSIIERIR 234 (352)
T ss_dssp HTCCTTCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHH----HTTCS---EEEECCTTTSCHHHHHHHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHc--CCEEEEEcCCHHHHHHHH----HhCCC---EEEcCcccccHHHHHHHHhc
Confidence 3445678999999764 66777788776 467999999998777665 35653 222211 1222222221100
Q ss_pred --CCCceeEEEEcCCccchHHHHHHHHhcCCCCeEEEEec
Q 025824 153 --NHGSFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYDN 190 (247)
Q Consensus 153 --~~~~fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv~d~ 190 (247)
....+|+||-... ....++.+.+.|+++|.++.-.
T Consensus 235 ~~~g~g~D~vid~~g---~~~~~~~~~~~l~~~G~iv~~G 271 (352)
T 1e3j_A 235 SAIGDLPNVTIDCSG---NEKCITIGINITRTGGTLMLVG 271 (352)
T ss_dssp HHSSSCCSEEEECSC---CHHHHHHHHHHSCTTCEEEECS
T ss_pred cccCCCCCEEEECCC---CHHHHHHHHHHHhcCCEEEEEe
Confidence 0246999875433 2345678889999999998643
No 319
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=96.12 E-value=0.012 Score=50.84 Aligned_cols=100 Identities=12% Similarity=0.062 Sum_probs=64.7
Q ss_pred hhcCCCEEEEEc--ccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcC
Q 025824 76 KLVNAKNTMEIG--VYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKN 153 (247)
Q Consensus 76 ~~~~~~~vLEiG--~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~ 153 (247)
...+.++||-+| .+.|..++.+++.. +++|++++.+++..+.+++ .|.. .++..+..+....+... .
T Consensus 160 ~~~~g~~VlV~Ga~G~iG~~~~q~a~~~--Ga~Vi~~~~~~~~~~~~~~----~Ga~---~~~~~~~~~~~~~~~~~--~ 228 (362)
T 2c0c_A 160 GLSEGKKVLVTAAAGGTGQFAMQLSKKA--KCHVIGTCSSDEKSAFLKS----LGCD---RPINYKTEPVGTVLKQE--Y 228 (362)
T ss_dssp CCCTTCEEEETTTTBTTHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH----TTCS---EEEETTTSCHHHHHHHH--C
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHH----cCCc---EEEecCChhHHHHHHHh--c
Confidence 445678999999 45777888888876 5699999999887766654 4542 22222211222222111 1
Q ss_pred CCceeEEEEcCCccchHHHHHHHHhcCCCCeEEEEec
Q 025824 154 HGSFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYDN 190 (247)
Q Consensus 154 ~~~fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv~d~ 190 (247)
...+|+||-.... ..++.+.+.|+++|.++.-.
T Consensus 229 ~~g~D~vid~~g~----~~~~~~~~~l~~~G~iv~~g 261 (362)
T 2c0c_A 229 PEGVDVVYESVGG----AMFDLAVDALATKGRLIVIG 261 (362)
T ss_dssp TTCEEEEEECSCT----HHHHHHHHHEEEEEEEEECC
T ss_pred CCCCCEEEECCCH----HHHHHHHHHHhcCCEEEEEe
Confidence 3579998754432 46788889999999998643
No 320
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=96.11 E-value=0.0047 Score=53.03 Aligned_cols=105 Identities=17% Similarity=0.277 Sum_probs=65.2
Q ss_pred HhhcCCCEEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcC
Q 025824 75 LKLVNAKNTMEIGVYT-GYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKN 153 (247)
Q Consensus 75 ~~~~~~~~vLEiG~g~-G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~ 153 (247)
....+..+||-+|+|. |..++.+++... ..+|+++|.+++..+.+++ .|.. .++..+..+....+.... .
T Consensus 162 ~~~~~g~~VlV~GaG~vG~~a~qla~~~G-a~~Vi~~~~~~~~~~~~~~----lGa~---~vi~~~~~~~~~~v~~~t-~ 232 (352)
T 3fpc_A 162 ANIKLGDTVCVIGIGPVGLMSVAGANHLG-AGRIFAVGSRKHCCDIALE----YGAT---DIINYKNGDIVEQILKAT-D 232 (352)
T ss_dssp TTCCTTCCEEEECCSHHHHHHHHHHHTTT-CSSEEEECCCHHHHHHHHH----HTCC---EEECGGGSCHHHHHHHHT-T
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CcEEEEECCCHHHHHHHHH----hCCc---eEEcCCCcCHHHHHHHHc-C
Confidence 3445678899999864 667777887753 2389999999987776655 4542 222222222222222111 1
Q ss_pred CCceeEEEEcCCccchHHHHHHHHhcCCCCeEEEEecc
Q 025824 154 HGSFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYDNT 191 (247)
Q Consensus 154 ~~~fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv~d~~ 191 (247)
...+|+||-.... ...++.+.+.|++||.++.-..
T Consensus 233 g~g~D~v~d~~g~---~~~~~~~~~~l~~~G~~v~~G~ 267 (352)
T 3fpc_A 233 GKGVDKVVIAGGD---VHTFAQAVKMIKPGSDIGNVNY 267 (352)
T ss_dssp TCCEEEEEECSSC---TTHHHHHHHHEEEEEEEEECCC
T ss_pred CCCCCEEEECCCC---hHHHHHHHHHHhcCCEEEEecc
Confidence 3479998743322 2456778889999999987544
No 321
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=96.11 E-value=0.0077 Score=51.19 Aligned_cols=99 Identities=12% Similarity=0.103 Sum_probs=61.3
Q ss_pred cCCCEEEEEcc--cccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCC
Q 025824 78 VNAKNTMEIGV--YTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHG 155 (247)
Q Consensus 78 ~~~~~vLEiG~--g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~ 155 (247)
.+.++||-+|+ |.|..+..++... +.+|++++.+++..+.++ ..|.. ..+-..+..+....+... ..+
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~~~~~--G~~V~~~~~~~~~~~~~~----~~g~~--~~~d~~~~~~~~~~~~~~--~~~ 213 (333)
T 1v3u_A 144 KGGETVLVSAAAGAVGSVVGQIAKLK--GCKVVGAAGSDEKIAYLK----QIGFD--AAFNYKTVNSLEEALKKA--SPD 213 (333)
T ss_dssp CSSCEEEEESTTBHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHH----HTTCS--EEEETTSCSCHHHHHHHH--CTT
T ss_pred CCCCEEEEecCCCcHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHH----hcCCc--EEEecCCHHHHHHHHHHH--hCC
Confidence 45679999997 5666667777664 579999999988766653 33532 112111111222222111 124
Q ss_pred ceeEEEEcCCccchHHHHHHHHhcCCCCeEEEEec
Q 025824 156 SFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYDN 190 (247)
Q Consensus 156 ~fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv~d~ 190 (247)
.+|++|..... ..+..+.+.|++||.++.-.
T Consensus 214 ~~d~vi~~~g~----~~~~~~~~~l~~~G~~v~~g 244 (333)
T 1v3u_A 214 GYDCYFDNVGG----EFLNTVLSQMKDFGKIAICG 244 (333)
T ss_dssp CEEEEEESSCH----HHHHHHHTTEEEEEEEEECC
T ss_pred CCeEEEECCCh----HHHHHHHHHHhcCCEEEEEe
Confidence 79998765542 34788889999999998643
No 322
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=96.09 E-value=0.03 Score=47.62 Aligned_cols=105 Identities=22% Similarity=0.205 Sum_probs=65.6
Q ss_pred hhcCCCEEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCC
Q 025824 76 KLVNAKNTMEIGVYT-GYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNH 154 (247)
Q Consensus 76 ~~~~~~~vLEiG~g~-G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~ 154 (247)
...+.++||-+|+|. |..++.+++.+. ...++++|.+++..+.+++ .|...-+.....+..+....+. ..
T Consensus 157 ~~~~g~~VlV~GaG~vG~~aiq~ak~~G-~~~vi~~~~~~~k~~~a~~----lGa~~~i~~~~~~~~~~~~~~~----~~ 227 (346)
T 4a2c_A 157 QGCENKNVIIIGAGTIGLLAIQCAVALG-AKSVTAIDISSEKLALAKS----FGAMQTFNSSEMSAPQMQSVLR----EL 227 (346)
T ss_dssp TCCTTSEEEEECCSHHHHHHHHHHHHTT-CSEEEEEESCHHHHHHHHH----TTCSEEEETTTSCHHHHHHHHG----GG
T ss_pred ccCCCCEEEEECCCCcchHHHHHHHHcC-CcEEEEEechHHHHHHHHH----cCCeEEEeCCCCCHHHHHHhhc----cc
Confidence 345668999999864 445667777764 4578999999987776654 5653222221222223333221 13
Q ss_pred CceeEEEEcCCccchHHHHHHHHhcCCCCeEEEEeccc
Q 025824 155 GSFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYDNTL 192 (247)
Q Consensus 155 ~~fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv~d~~~ 192 (247)
..+|+||-... ....++.+.+.|++||.+++-...
T Consensus 228 ~g~d~v~d~~G---~~~~~~~~~~~l~~~G~~v~~g~~ 262 (346)
T 4a2c_A 228 RFNQLILETAG---VPQTVELAVEIAGPHAQLALVGTL 262 (346)
T ss_dssp CSSEEEEECSC---SHHHHHHHHHHCCTTCEEEECCCC
T ss_pred CCccccccccc---ccchhhhhhheecCCeEEEEEecc
Confidence 56787764432 355678888999999999975543
No 323
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=96.08 E-value=0.013 Score=50.05 Aligned_cols=103 Identities=17% Similarity=0.136 Sum_probs=66.6
Q ss_pred hhcCCCEEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCC
Q 025824 76 KLVNAKNTMEIGVYT-GYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNH 154 (247)
Q Consensus 76 ~~~~~~~vLEiG~g~-G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~ 154 (247)
...+..+||-+|+|. |..++.+++... +.+|+++|.+++..+.+++ .|... ++..+. +....+.... ..
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~g-~~~Vi~~~~~~~~~~~~~~----lGa~~---~i~~~~-~~~~~v~~~t-~g 237 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAVS-AARVIAVDLDDDRLALARE----VGADA---AVKSGA-GAADAIRELT-GG 237 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHHC-CCEEEEEESCHHHHHHHHH----TTCSE---EEECST-THHHHHHHHH-GG
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCCHHHHHHHHH----cCCCE---EEcCCC-cHHHHHHHHh-CC
Confidence 345678999999864 777778888764 6799999999987776654 56532 222221 2222221111 12
Q ss_pred CceeEEEEcCCccchHHHHHHHHhcCCCCeEEEEecc
Q 025824 155 GSFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYDNT 191 (247)
Q Consensus 155 ~~fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv~d~~ 191 (247)
..+|+||-... ....++.+.+.|+++|.++.-..
T Consensus 238 ~g~d~v~d~~G---~~~~~~~~~~~l~~~G~iv~~G~ 271 (345)
T 3jv7_A 238 QGATAVFDFVG---AQSTIDTAQQVVAVDGHISVVGI 271 (345)
T ss_dssp GCEEEEEESSC---CHHHHHHHHHHEEEEEEEEECSC
T ss_pred CCCeEEEECCC---CHHHHHHHHHHHhcCCEEEEECC
Confidence 47998874332 24467888899999999997543
No 324
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=96.04 E-value=0.0056 Score=52.20 Aligned_cols=53 Identities=15% Similarity=0.214 Sum_probs=41.9
Q ss_pred CcEEEEEecchhhhHHHHhhhcCCCceeEEEEcCCcc-----------------chHHHHHHHHhcCCCCeEEEE
Q 025824 131 HKIDFREGPALPVLDLLIQDEKNHGSFDFIFVDADKD-----------------NYLNYHKRLIELVKVGGVIGY 188 (247)
Q Consensus 131 ~~i~~~~gd~~~~l~~l~~~~~~~~~fD~v~id~~~~-----------------~~~~~l~~~~~~L~~gG~lv~ 188 (247)
.+.++++||+.+.+..+ ..++||+||+|.+.. .....+..+.++|+|||.+++
T Consensus 13 ~~~~ii~gD~~~~l~~l-----~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i 82 (323)
T 1boo_A 13 SNGSMYIGDSLELLESF-----PEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVV 82 (323)
T ss_dssp SSEEEEESCHHHHGGGS-----CSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred CCceEEeCcHHHHHhhC-----CCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEE
Confidence 46889999999887765 257899999998731 234567777899999999887
No 325
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=96.04 E-value=0.022 Score=49.27 Aligned_cols=98 Identities=20% Similarity=0.305 Sum_probs=63.1
Q ss_pred hcCCCEEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEE-e----cchhhhHHHHhh
Q 025824 77 LVNAKNTMEIGVYT-GYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFRE-G----PALPVLDLLIQD 150 (247)
Q Consensus 77 ~~~~~~vLEiG~g~-G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~-g----d~~~~l~~l~~~ 150 (247)
..+.++||-+|+|. |..++.+++.+. ..+|++++.+++..+.+++ .|.. .++. . +..+.+..+.
T Consensus 190 ~~~g~~VlV~GaG~vG~~a~qla~~~G-a~~Vi~~~~~~~~~~~~~~----lGa~---~vi~~~~~~~~~~~~~~~~~-- 259 (374)
T 1cdo_A 190 VEPGSTCAVFGLGAVGLAAVMGCHSAG-AKRIIAVDLNPDKFEKAKV----FGAT---DFVNPNDHSEPISQVLSKMT-- 259 (374)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCGGGHHHHHH----TTCC---EEECGGGCSSCHHHHHHHHH--
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCCHHHHHHHHH----hCCc---eEEeccccchhHHHHHHHHh--
Confidence 34567999999753 667777888763 2389999999998877654 5642 1221 1 1112222221
Q ss_pred hcCCCceeEEEEcCCccchHHHHHHHHhcCCCC-eEEEEec
Q 025824 151 EKNHGSFDFIFVDADKDNYLNYHKRLIELVKVG-GVIGYDN 190 (247)
Q Consensus 151 ~~~~~~fD~v~id~~~~~~~~~l~~~~~~L~~g-G~lv~d~ 190 (247)
.+.+|+||-... ....++.+.+.|+++ |.++.-.
T Consensus 260 ---~~g~D~vid~~g---~~~~~~~~~~~l~~~~G~iv~~G 294 (374)
T 1cdo_A 260 ---NGGVDFSLECVG---NVGVMRNALESCLKGWGVSVLVG 294 (374)
T ss_dssp ---TSCBSEEEECSC---CHHHHHHHHHTBCTTTCEEEECS
T ss_pred ---CCCCCEEEECCC---CHHHHHHHHHHhhcCCcEEEEEc
Confidence 247998874332 245678888999999 9998643
No 326
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=96.04 E-value=0.0097 Score=50.61 Aligned_cols=101 Identities=10% Similarity=0.049 Sum_probs=64.6
Q ss_pred hhcCCCEEEEEcc--cccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcC
Q 025824 76 KLVNAKNTMEIGV--YTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKN 153 (247)
Q Consensus 76 ~~~~~~~vLEiG~--g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~ 153 (247)
...+.++||-+|+ |.|..+..+++.. +.+|++++.+++..+.+. +..|.. .++.....+....+... .
T Consensus 146 ~~~~g~~vlI~Ga~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~---~~~g~~---~~~~~~~~~~~~~~~~~--~ 215 (336)
T 4b7c_A 146 QPKNGETVVISGAAGAVGSVAGQIARLK--GCRVVGIAGGAEKCRFLV---EELGFD---GAIDYKNEDLAAGLKRE--C 215 (336)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHH---HTTCCS---EEEETTTSCHHHHHHHH--C
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHH---HHcCCC---EEEECCCHHHHHHHHHh--c
Confidence 3456789999997 5677777788765 569999999988666552 334542 12222212222222211 1
Q ss_pred CCceeEEEEcCCccchHHHHHHHHhcCCCCeEEEEec
Q 025824 154 HGSFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYDN 190 (247)
Q Consensus 154 ~~~fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv~d~ 190 (247)
.+.+|+||-.... ..+..+.+.|+++|.++.-.
T Consensus 216 ~~~~d~vi~~~g~----~~~~~~~~~l~~~G~iv~~G 248 (336)
T 4b7c_A 216 PKGIDVFFDNVGG----EILDTVLTRIAFKARIVLCG 248 (336)
T ss_dssp TTCEEEEEESSCH----HHHHHHHTTEEEEEEEEECC
T ss_pred CCCceEEEECCCc----chHHHHHHHHhhCCEEEEEe
Confidence 3579988754432 46788889999999999743
No 327
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=96.01 E-value=0.014 Score=50.92 Aligned_cols=107 Identities=13% Similarity=0.110 Sum_probs=66.0
Q ss_pred HhhcCCCEEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchh-hhHHHHhhhc
Q 025824 75 LKLVNAKNTMEIGVYT-GYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALP-VLDLLIQDEK 152 (247)
Q Consensus 75 ~~~~~~~~vLEiG~g~-G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~-~l~~l~~~~~ 152 (247)
....+..+||-+|+|. |..++.+|+.+. ..+|+++|.+++..+.+++ .|. + .+.-...+ ....+....
T Consensus 181 ~~~~~g~~VlV~GaG~vG~~aiqlAk~~G-a~~Vi~~~~~~~~~~~a~~----lGa-~---~i~~~~~~~~~~~v~~~t- 250 (398)
T 1kol_A 181 AGVGPGSTVYVAGAGPVGLAAAASARLLG-AAVVIVGDLNPARLAHAKA----QGF-E---IADLSLDTPLHEQIAALL- 250 (398)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEEESCHHHHHHHHH----TTC-E---EEETTSSSCHHHHHHHHH-
T ss_pred cCCCCCCEEEEECCcHHHHHHHHHHHHCC-CCeEEEEcCCHHHHHHHHH----cCC-c---EEccCCcchHHHHHHHHh-
Confidence 3445668999999764 777788888764 2389999999987777654 565 2 22211111 122221111
Q ss_pred CCCceeEEEEcCCccc------------hHHHHHHHHhcCCCCeEEEEecc
Q 025824 153 NHGSFDFIFVDADKDN------------YLNYHKRLIELVKVGGVIGYDNT 191 (247)
Q Consensus 153 ~~~~fD~v~id~~~~~------------~~~~l~~~~~~L~~gG~lv~d~~ 191 (247)
....+|+||-...... ....++.+.+.|++||.+++-..
T Consensus 251 ~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G~ 301 (398)
T 1kol_A 251 GEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGL 301 (398)
T ss_dssp SSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSC
T ss_pred CCCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEecc
Confidence 1247999874332211 22467888899999999987543
No 328
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=96.01 E-value=0.0093 Score=51.70 Aligned_cols=99 Identities=22% Similarity=0.316 Sum_probs=64.4
Q ss_pred hcCCCEEEEEccc-ccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEe-----cchhhhHHHHhh
Q 025824 77 LVNAKNTMEIGVY-TGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREG-----PALPVLDLLIQD 150 (247)
Q Consensus 77 ~~~~~~vLEiG~g-~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~g-----d~~~~l~~l~~~ 150 (247)
..+..+||-+|+| .|..++.+++... ..+|+++|.+++..+.++ +.|... ++.- +..+.+..+
T Consensus 191 ~~~g~~VlV~GaG~vG~~a~q~a~~~G-a~~Vi~~~~~~~~~~~a~----~lGa~~---vi~~~~~~~~~~~~i~~~--- 259 (378)
T 3uko_A 191 VEPGSNVAIFGLGTVGLAVAEGAKTAG-ASRIIGIDIDSKKYETAK----KFGVNE---FVNPKDHDKPIQEVIVDL--- 259 (378)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHHHT-CSCEEEECSCTTHHHHHH----TTTCCE---EECGGGCSSCHHHHHHHH---
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCCHHHHHHHH----HcCCcE---EEccccCchhHHHHHHHh---
Confidence 3456789999986 3667777887763 238999999999777664 456522 2211 112222222
Q ss_pred hcCCCceeEEEEcCCccchHHHHHHHHhcCCCC-eEEEEecc
Q 025824 151 EKNHGSFDFIFVDADKDNYLNYHKRLIELVKVG-GVIGYDNT 191 (247)
Q Consensus 151 ~~~~~~fD~v~id~~~~~~~~~l~~~~~~L~~g-G~lv~d~~ 191 (247)
..+.+|+||-... ....++.+.+.|++| |.++.-..
T Consensus 260 --~~gg~D~vid~~g---~~~~~~~~~~~l~~g~G~iv~~G~ 296 (378)
T 3uko_A 260 --TDGGVDYSFECIG---NVSVMRAALECCHKGWGTSVIVGV 296 (378)
T ss_dssp --TTSCBSEEEECSC---CHHHHHHHHHTBCTTTCEEEECSC
T ss_pred --cCCCCCEEEECCC---CHHHHHHHHHHhhccCCEEEEEcc
Confidence 1348999874332 345678889999996 99987544
No 329
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=96.01 E-value=0.017 Score=49.89 Aligned_cols=101 Identities=13% Similarity=0.268 Sum_probs=63.1
Q ss_pred hcCCCEEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecc--hhhhHHHHhhhcC
Q 025824 77 LVNAKNTMEIGVYT-GYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPA--LPVLDLLIQDEKN 153 (247)
Q Consensus 77 ~~~~~~vLEiG~g~-G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~--~~~l~~l~~~~~~ 153 (247)
..+..+||-+|+|. |..++.+++.+. ..+|++++.+++..+.+++ .|.. .++.-+. .+....+.+. .
T Consensus 189 ~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~~----lGa~---~vi~~~~~~~~~~~~i~~~--t 258 (373)
T 1p0f_A 189 VTPGSTCAVFGLGGVGFSAIVGCKAAG-ASRIIGVGTHKDKFPKAIE----LGAT---ECLNPKDYDKPIYEVICEK--T 258 (373)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHT-CSEEEEECSCGGGHHHHHH----TTCS---EEECGGGCSSCHHHHHHHH--T
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEECCCHHHHHHHHH----cCCc---EEEecccccchHHHHHHHH--h
Confidence 34567999999763 667777887763 2389999999998877654 5652 1221110 1122222111 1
Q ss_pred CCceeEEEEcCCccchHHHHHHHHhcCCCC-eEEEEec
Q 025824 154 HGSFDFIFVDADKDNYLNYHKRLIELVKVG-GVIGYDN 190 (247)
Q Consensus 154 ~~~fD~v~id~~~~~~~~~l~~~~~~L~~g-G~lv~d~ 190 (247)
.+.+|+||-... ....+..+.+.|+++ |.++.-.
T Consensus 259 ~gg~Dvvid~~g---~~~~~~~~~~~l~~~~G~iv~~G 293 (373)
T 1p0f_A 259 NGGVDYAVECAG---RIETMMNALQSTYCGSGVTVVLG 293 (373)
T ss_dssp TSCBSEEEECSC---CHHHHHHHHHTBCTTTCEEEECC
T ss_pred CCCCCEEEECCC---CHHHHHHHHHHHhcCCCEEEEEc
Confidence 247998874332 245678888999999 9998644
No 330
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=95.99 E-value=0.0073 Score=51.57 Aligned_cols=101 Identities=14% Similarity=0.056 Sum_probs=62.9
Q ss_pred hcCCCEEEEEccc--ccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCC
Q 025824 77 LVNAKNTMEIGVY--TGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNH 154 (247)
Q Consensus 77 ~~~~~~vLEiG~g--~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~ 154 (247)
..+.++||-+|+| .|..++.+++.. +++|++++.+++..+.+++ .|.. .++.....+....+.... ..
T Consensus 142 ~~~g~~VlV~Ga~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~----lga~---~~~~~~~~~~~~~~~~~~-~~ 211 (340)
T 3gms_A 142 LQRNDVLLVNACGSAIGHLFAQLSQIL--NFRLIAVTRNNKHTEELLR----LGAA---YVIDTSTAPLYETVMELT-NG 211 (340)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHH--TCEEEEEESSSTTHHHHHH----HTCS---EEEETTTSCHHHHHHHHT-TT
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHh----CCCc---EEEeCCcccHHHHHHHHh-CC
Confidence 3456899999986 677777788765 5799999999998887765 3542 122222122222222111 13
Q ss_pred CceeEEEEcCCccchHHHHHHHHhcCCCCeEEEEecc
Q 025824 155 GSFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYDNT 191 (247)
Q Consensus 155 ~~fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv~d~~ 191 (247)
..+|+||-..... . .....+.|+++|.++.-..
T Consensus 212 ~g~Dvvid~~g~~---~-~~~~~~~l~~~G~iv~~G~ 244 (340)
T 3gms_A 212 IGADAAIDSIGGP---D-GNELAFSLRPNGHFLTIGL 244 (340)
T ss_dssp SCEEEEEESSCHH---H-HHHHHHTEEEEEEEEECCC
T ss_pred CCCcEEEECCCCh---h-HHHHHHHhcCCCEEEEEee
Confidence 4799887544322 2 2334489999999997543
No 331
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=95.96 E-value=0.0043 Score=51.16 Aligned_cols=53 Identities=9% Similarity=0.152 Sum_probs=40.6
Q ss_pred cEEEEEecchhhhHHHHhhhcCCCceeEEEEcCCcc-----------------chHHHHHHHHhcCCCCeEEEEe
Q 025824 132 KIDFREGPALPVLDLLIQDEKNHGSFDFIFVDADKD-----------------NYLNYHKRLIELVKVGGVIGYD 189 (247)
Q Consensus 132 ~i~~~~gd~~~~l~~l~~~~~~~~~fD~v~id~~~~-----------------~~~~~l~~~~~~L~~gG~lv~d 189 (247)
..++++||+.+.+..+ ..++||+||+|.+.. .....++.+.++|+|||+|++.
T Consensus 4 ~~~l~~gD~~~~l~~l-----~~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~ 73 (260)
T 1g60_A 4 INKIHQMNCFDFLDQV-----ENKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIF 73 (260)
T ss_dssp SSSEEECCHHHHHHHS-----CTTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cCeEEechHHHHHHhc-----cccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEE
Confidence 3568899999888776 257899999999831 1234567777999999999875
No 332
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=95.94 E-value=0.05 Score=46.66 Aligned_cols=105 Identities=11% Similarity=0.016 Sum_probs=66.3
Q ss_pred HhhcCCCEEEEEcccc-cHHHHHHHhhCCCCCE-EEEEeCCcchHHHHHHHHHHcCCCCcEEEEEec--chhhhHHHHhh
Q 025824 75 LKLVNAKNTMEIGVYT-GYSLLATALALPDDGK-ILAMDINRENYELGLPVIQKAGVAHKIDFREGP--ALPVLDLLIQD 150 (247)
Q Consensus 75 ~~~~~~~~vLEiG~g~-G~st~~la~~~~~~~~-v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd--~~~~l~~l~~~ 150 (247)
....+..+||-+|+|. |..++.+++.. +.+ |++++.+++..+.+++. .. .-+.+...+ ..+....+...
T Consensus 175 ~~~~~g~~VlV~GaG~vG~~aiqlak~~--Ga~~Vi~~~~~~~~~~~a~~l-~~----~~~~~~~~~~~~~~~~~~v~~~ 247 (363)
T 3m6i_A 175 AGVRLGDPVLICGAGPIGLITMLCAKAA--GACPLVITDIDEGRLKFAKEI-CP----EVVTHKVERLSAEESAKKIVES 247 (363)
T ss_dssp HTCCTTCCEEEECCSHHHHHHHHHHHHT--TCCSEEEEESCHHHHHHHHHH-CT----TCEEEECCSCCHHHHHHHHHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHc--CCCEEEEECCCHHHHHHHHHh-ch----hcccccccccchHHHHHHHHHH
Confidence 3445678899999864 66777888876 454 99999999988888775 21 223332111 12222222211
Q ss_pred hcCCCceeEEEEcCCccchHHHHHHHHhcCCCCeEEEEec
Q 025824 151 EKNHGSFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYDN 190 (247)
Q Consensus 151 ~~~~~~fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv~d~ 190 (247)
. ....+|+||-... ....++.+.+.|++||.++.-.
T Consensus 248 t-~g~g~Dvvid~~g---~~~~~~~~~~~l~~~G~iv~~G 283 (363)
T 3m6i_A 248 F-GGIEPAVALECTG---VESSIAAAIWAVKFGGKVFVIG 283 (363)
T ss_dssp T-SSCCCSEEEECSC---CHHHHHHHHHHSCTTCEEEECC
T ss_pred h-CCCCCCEEEECCC---ChHHHHHHHHHhcCCCEEEEEc
Confidence 1 1357998874332 2346788889999999999743
No 333
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=95.94 E-value=0.099 Score=44.66 Aligned_cols=116 Identities=10% Similarity=0.123 Sum_probs=74.8
Q ss_pred HHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcC--------------------CC
Q 025824 71 LNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAG--------------------VA 130 (247)
Q Consensus 71 l~~l~~~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g--------------------~~ 130 (247)
+...+...+...|+.+|||...-...+....+ +.+++-||. |+.++.-++.+...+ ..
T Consensus 89 v~~fl~~~~~~qVV~LGaGlDTr~~RL~~~~~-~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~ 166 (334)
T 1rjd_A 89 ILEFLVANEKVQVVNLGCGSDLRMLPLLQMFP-HLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQ 166 (334)
T ss_dssp HHHHHHHCSSEEEEEETCTTCCTHHHHHHHCT-TEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEEC
T ss_pred HHHHHHHCCCcEEEEeCCCCccHHHHhcCcCC-CCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccCC
Confidence 33333334667899999999999888887544 566777777 888888888877652 13
Q ss_pred CcEEEEEecchhh--hHHHHhhhcCCCceeEEEEcCC-----ccchHHHHHHHHhcCCCCeEEE-Ee
Q 025824 131 HKIDFREGPALPV--LDLLIQDEKNHGSFDFIFVDAD-----KDNYLNYHKRLIELVKVGGVIG-YD 189 (247)
Q Consensus 131 ~~i~~~~gd~~~~--l~~l~~~~~~~~~fD~v~id~~-----~~~~~~~l~~~~~~L~~gG~lv-~d 189 (247)
++.+++-.|..+. +..+....+..+...+++.-+. .+.....++.+.... |+|.++ ++
T Consensus 167 ~~~~~v~~DL~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~-~~~~~v~~e 232 (334)
T 1rjd_A 167 GRYKLAACDLNDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKF-SHGLWISYD 232 (334)
T ss_dssp SSEEEEECCTTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEE
T ss_pred CceEEEecCCCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC-CCcEEEEEe
Confidence 6789999998763 3332222212245566666554 344556777777666 666665 44
No 334
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=95.93 E-value=0.032 Score=48.17 Aligned_cols=98 Identities=20% Similarity=0.266 Sum_probs=63.1
Q ss_pred hcCCCEEEEEccc-ccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEE-e----cchhhhHHHHhh
Q 025824 77 LVNAKNTMEIGVY-TGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFRE-G----PALPVLDLLIQD 150 (247)
Q Consensus 77 ~~~~~~vLEiG~g-~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~-g----d~~~~l~~l~~~ 150 (247)
..+..+||-+|+| .|..++.+++.+. ..+|+++|.+++..+.+++ .|.. .++. . +..+.+..+.
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~~----lGa~---~vi~~~~~~~~~~~~v~~~~-- 262 (376)
T 1e3i_A 193 VTPGSTCAVFGLGCVGLSAIIGCKIAG-ASRIIAIDINGEKFPKAKA----LGAT---DCLNPRELDKPVQDVITELT-- 262 (376)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCGGGHHHHHH----TTCS---EEECGGGCSSCHHHHHHHHH--
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCCHHHHHHHHH----hCCc---EEEccccccchHHHHHHHHh--
Confidence 3456799999976 3667777888763 2389999999998777654 5652 1221 1 1122222221
Q ss_pred hcCCCceeEEEEcCCccchHHHHHHHHhcCCCC-eEEEEec
Q 025824 151 EKNHGSFDFIFVDADKDNYLNYHKRLIELVKVG-GVIGYDN 190 (247)
Q Consensus 151 ~~~~~~fD~v~id~~~~~~~~~l~~~~~~L~~g-G~lv~d~ 190 (247)
.+.+|+||-... ....++.+.+.|+++ |.++.-.
T Consensus 263 ---~~g~Dvvid~~G---~~~~~~~~~~~l~~~~G~iv~~G 297 (376)
T 1e3i_A 263 ---AGGVDYSLDCAG---TAQTLKAAVDCTVLGWGSCTVVG 297 (376)
T ss_dssp ---TSCBSEEEESSC---CHHHHHHHHHTBCTTTCEEEECC
T ss_pred ---CCCccEEEECCC---CHHHHHHHHHHhhcCCCEEEEEC
Confidence 247998874332 245678888999999 9998644
No 335
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=95.92 E-value=0.022 Score=49.14 Aligned_cols=98 Identities=19% Similarity=0.296 Sum_probs=62.8
Q ss_pred hcCCCEEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEe-----cchhhhHHHHhh
Q 025824 77 LVNAKNTMEIGVYT-GYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREG-----PALPVLDLLIQD 150 (247)
Q Consensus 77 ~~~~~~vLEiG~g~-G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~g-----d~~~~l~~l~~~ 150 (247)
..+.++||-+|+|. |..++.+++.+. ..+|++++.+++..+.+++ .|.. .++.. +..+.+..+
T Consensus 189 ~~~g~~VlV~GaG~vG~~a~qla~~~G-a~~Vi~~~~~~~~~~~~~~----lGa~---~vi~~~~~~~~~~~~~~~~--- 257 (374)
T 2jhf_A 189 VTQGSTCAVFGLGGVGLSVIMGCKAAG-AARIIGVDINKDKFAKAKE----VGAT---ECVNPQDYKKPIQEVLTEM--- 257 (374)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCGGGHHHHHH----TTCS---EEECGGGCSSCHHHHHHHH---
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCCHHHHHHHHH----hCCc---eEecccccchhHHHHHHHH---
Confidence 34567999999764 666777887763 2389999999998877653 5642 12211 111222222
Q ss_pred hcCCCceeEEEEcCCccchHHHHHHHHhcCCCC-eEEEEec
Q 025824 151 EKNHGSFDFIFVDADKDNYLNYHKRLIELVKVG-GVIGYDN 190 (247)
Q Consensus 151 ~~~~~~fD~v~id~~~~~~~~~l~~~~~~L~~g-G~lv~d~ 190 (247)
..+.+|+||-... ....++.+.+.|+++ |.++.-.
T Consensus 258 --~~~g~D~vid~~g---~~~~~~~~~~~l~~~~G~iv~~G 293 (374)
T 2jhf_A 258 --SNGGVDFSFEVIG---RLDTMVTALSCCQEAYGVSVIVG 293 (374)
T ss_dssp --TTSCBSEEEECSC---CHHHHHHHHHHBCTTTCEEEECS
T ss_pred --hCCCCcEEEECCC---CHHHHHHHHHHhhcCCcEEEEec
Confidence 1247998874332 245677888999999 9998644
No 336
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=95.88 E-value=0.044 Score=47.36 Aligned_cols=97 Identities=16% Similarity=0.185 Sum_probs=63.6
Q ss_pred hhcCCCEEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCC
Q 025824 76 KLVNAKNTMEIGVYT-GYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNH 154 (247)
Q Consensus 76 ~~~~~~~vLEiG~g~-G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~ 154 (247)
...+..+||-+|+|. |..++.+++.. +.+|++++.+++..+.+++ .|.. .++.....+.+..+ .
T Consensus 191 ~~~~g~~VlV~GaG~vG~~aiqlak~~--Ga~Vi~~~~~~~~~~~a~~----lGa~---~vi~~~~~~~~~~~------~ 255 (369)
T 1uuf_A 191 QAGPGKKVGVVGIGGLGHMGIKLAHAM--GAHVVAFTTSEAKREAAKA----LGAD---EVVNSRNADEMAAH------L 255 (369)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHH----HTCS---EEEETTCHHHHHTT------T
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH----cCCc---EEeccccHHHHHHh------h
Confidence 345668999999874 66777888876 5789999999998887765 4542 22222222222322 2
Q ss_pred CceeEEEEcCCccchHHHHHHHHhcCCCCeEEEEec
Q 025824 155 GSFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYDN 190 (247)
Q Consensus 155 ~~fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv~d~ 190 (247)
..+|+||-..... ..++.+.+.|+++|.++.-.
T Consensus 256 ~g~Dvvid~~g~~---~~~~~~~~~l~~~G~iv~~G 288 (369)
T 1uuf_A 256 KSFDFILNTVAAP---HNLDDFTTLLKRDGTMTLVG 288 (369)
T ss_dssp TCEEEEEECCSSC---CCHHHHHTTEEEEEEEEECC
T ss_pred cCCCEEEECCCCH---HHHHHHHHHhccCCEEEEec
Confidence 5799887443322 23567788999999998643
No 337
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=95.86 E-value=0.24 Score=41.79 Aligned_cols=110 Identities=8% Similarity=-0.008 Sum_probs=72.1
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCC--CCcEEEEEecchhh-hHHHHhhhcCCC
Q 025824 79 NAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGV--AHKIDFREGPALPV-LDLLIQDEKNHG 155 (247)
Q Consensus 79 ~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~--~~~i~~~~gd~~~~-l~~l~~~~~~~~ 155 (247)
.++.||++|||.=.....+. .+++.+++-+| .|+.++..++.+...+. ..+..++..|..+. +..+...+....
T Consensus 102 g~~QvV~LGaGlDTra~Rl~--~~~~~~v~evD-~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d~~~~~l~~~g~d~~ 178 (310)
T 2uyo_A 102 GIRQFVILASGLDSRAYRLD--WPTGTTVYEID-QPKVLAYKSTTLAEHGVTPTADRREVPIDLRQDWPPALRSAGFDPS 178 (310)
T ss_dssp TCCEEEEETCTTCCHHHHSC--CCTTCEEEEEE-CHHHHHHHHHHHHHTTCCCSSEEEEEECCTTSCHHHHHHHTTCCTT
T ss_pred CCCeEEEeCCCCCchhhhcc--CCCCcEEEEcC-CHHHHHHHHHHHHhcCCCCCCCeEEEecchHhhHHHHHHhccCCCC
Confidence 46789999987665533332 24457999999 69999999999986553 35788888988763 233332221112
Q ss_pred ceeEEEEcCC-----ccchHHHHHHHHhcCCCCeEEEEecc
Q 025824 156 SFDFIFVDAD-----KDNYLNYHKRLIELVKVGGVIGYDNT 191 (247)
Q Consensus 156 ~fD~v~id~~-----~~~~~~~l~~~~~~L~~gG~lv~d~~ 191 (247)
..=++++-+. .+.....++.+...+.||+.|+++-+
T Consensus 179 ~Pt~~i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs~l~~d~~ 219 (310)
T 2uyo_A 179 ARTAWLAEGLLMYLPATAQDGLFTEIGGLSAVGSRIAVETS 219 (310)
T ss_dssp SCEEEEECSCGGGSCHHHHHHHHHHHHHTCCTTCEEEEECC
T ss_pred CCEEEEEechHhhCCHHHHHHHHHHHHHhCCCCeEEEEEec
Confidence 2233433332 33455677888888899999999864
No 338
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=95.84 E-value=0.026 Score=49.36 Aligned_cols=105 Identities=8% Similarity=0.058 Sum_probs=59.9
Q ss_pred cCCCEEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCc
Q 025824 78 VNAKNTMEIGVYT-GYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGS 156 (247)
Q Consensus 78 ~~~~~vLEiG~g~-G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~ 156 (247)
.+..+||-+|+|. |..++.+++... ..+|+++|.+++..+.+++ .|.. .++..+..+....+.... ....
T Consensus 212 ~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~~~~----lGa~---~vi~~~~~~~~~~i~~~t-~g~g 282 (404)
T 3ip1_A 212 RPGDNVVILGGGPIGLAAVAILKHAG-ASKVILSEPSEVRRNLAKE----LGAD---HVIDPTKENFVEAVLDYT-NGLG 282 (404)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCHHHHHHHHH----HTCS---EEECTTTSCHHHHHHHHT-TTCC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCHHHHHHHHH----cCCC---EEEcCCCCCHHHHHHHHh-CCCC
Confidence 4567899999753 566677887763 2399999999988777654 4542 222221122222222111 1347
Q ss_pred eeEEEEcCCcc--chHHHHHHHHhcCCCCeEEEEecc
Q 025824 157 FDFIFVDADKD--NYLNYHKRLIELVKVGGVIGYDNT 191 (247)
Q Consensus 157 fD~v~id~~~~--~~~~~l~~~~~~L~~gG~lv~d~~ 191 (247)
+|+||-..... .....++.+++.++++|.++.-..
T Consensus 283 ~D~vid~~g~~~~~~~~~~~~l~~~~~~~G~iv~~G~ 319 (404)
T 3ip1_A 283 AKLFLEATGVPQLVWPQIEEVIWRARGINATVAIVAR 319 (404)
T ss_dssp CSEEEECSSCHHHHHHHHHHHHHHCSCCCCEEEECSC
T ss_pred CCEEEECCCCcHHHHHHHHHHHHhccCCCcEEEEeCC
Confidence 99887433322 222233333355599999997543
No 339
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=95.83 E-value=0.024 Score=48.93 Aligned_cols=98 Identities=17% Similarity=0.245 Sum_probs=62.8
Q ss_pred hcCCCEEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEE-ec----chhhhHHHHhh
Q 025824 77 LVNAKNTMEIGVYT-GYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFRE-GP----ALPVLDLLIQD 150 (247)
Q Consensus 77 ~~~~~~vLEiG~g~-G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~-gd----~~~~l~~l~~~ 150 (247)
..+..+||-+|+|. |..++.+++.+. ..+|++++.+++..+.+++ .|.. .++. .+ ..+.+..+
T Consensus 188 ~~~g~~VlV~GaG~vG~~avqla~~~G-a~~Vi~~~~~~~~~~~~~~----lGa~---~vi~~~~~~~~~~~~v~~~--- 256 (373)
T 2fzw_A 188 LEPGSVCAVFGLGGVGLAVIMGCKVAG-ASRIIGVDINKDKFARAKE----FGAT---ECINPQDFSKPIQEVLIEM--- 256 (373)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHT-CSEEEEECSCGGGHHHHHH----HTCS---EEECGGGCSSCHHHHHHHH---
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCCHHHHHHHHH----cCCc---eEeccccccccHHHHHHHH---
Confidence 34567899999753 666777787753 2389999999998877764 4542 1221 11 11222222
Q ss_pred hcCCCceeEEEEcCCccchHHHHHHHHhcCCCC-eEEEEec
Q 025824 151 EKNHGSFDFIFVDADKDNYLNYHKRLIELVKVG-GVIGYDN 190 (247)
Q Consensus 151 ~~~~~~fD~v~id~~~~~~~~~l~~~~~~L~~g-G~lv~d~ 190 (247)
..+.+|+||-... ....++.+.+.|+++ |.++.-.
T Consensus 257 --~~~g~D~vid~~g---~~~~~~~~~~~l~~~~G~iv~~G 292 (373)
T 2fzw_A 257 --TDGGVDYSFECIG---NVKVMRAALEACHKGWGVSVVVG 292 (373)
T ss_dssp --TTSCBSEEEECSC---CHHHHHHHHHTBCTTTCEEEECS
T ss_pred --hCCCCCEEEECCC---cHHHHHHHHHhhccCCcEEEEEe
Confidence 1247998874332 245678888999999 9998644
No 340
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=95.81 E-value=0.027 Score=48.13 Aligned_cols=100 Identities=14% Similarity=0.064 Sum_probs=62.8
Q ss_pred hcCCCEEEEEcc--cccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEE-ecchhhhHHHHhhhcC
Q 025824 77 LVNAKNTMEIGV--YTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFRE-GPALPVLDLLIQDEKN 153 (247)
Q Consensus 77 ~~~~~~vLEiG~--g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~-gd~~~~l~~l~~~~~~ 153 (247)
..+.++||-+|+ |.|..+..+++.. +.+|++++.+++..+.+++ .|.. .++. .+..+....+....
T Consensus 167 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~--Ga~V~~~~~~~~~~~~~~~----~g~~---~~~d~~~~~~~~~~~~~~~-- 235 (347)
T 2hcy_A 167 LMAGHWVAISGAAGGLGSLAVQYAKAM--GYRVLGIDGGEGKEELFRS----IGGE---VFIDFTKEKDIVGAVLKAT-- 235 (347)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECSTTHHHHHHH----TTCC---EEEETTTCSCHHHHHHHHH--
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHC--CCcEEEEcCCHHHHHHHHH----cCCc---eEEecCccHhHHHHHHHHh--
Confidence 345689999998 5677777777765 5799999999887766544 4542 1221 11112212221111
Q ss_pred CCceeEEEEcCCccchHHHHHHHHhcCCCCeEEEEec
Q 025824 154 HGSFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYDN 190 (247)
Q Consensus 154 ~~~fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv~d~ 190 (247)
.+.+|+||.... ....++.+.+.|+++|.++.-.
T Consensus 236 ~~~~D~vi~~~g---~~~~~~~~~~~l~~~G~iv~~g 269 (347)
T 2hcy_A 236 DGGAHGVINVSV---SEAAIEASTRYVRANGTTVLVG 269 (347)
T ss_dssp TSCEEEEEECSS---CHHHHHHHTTSEEEEEEEEECC
T ss_pred CCCCCEEEECCC---cHHHHHHHHHHHhcCCEEEEEe
Confidence 237999876543 2456788889999999998643
No 341
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=95.79 E-value=0.0075 Score=51.33 Aligned_cols=99 Identities=13% Similarity=0.085 Sum_probs=63.2
Q ss_pred cCCCEEEEEcc--cccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCC
Q 025824 78 VNAKNTMEIGV--YTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHG 155 (247)
Q Consensus 78 ~~~~~vLEiG~--g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~ 155 (247)
.+.++||-+|+ |.|..++.+++.. +.+|++++.+++..+.+++ .|.. .++..+..+....+.... ...
T Consensus 147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~----~ga~---~~~~~~~~~~~~~~~~~~-~~~ 216 (334)
T 3qwb_A 147 KKGDYVLLFAAAGGVGLILNQLLKMK--GAHTIAVASTDEKLKIAKE----YGAE---YLINASKEDILRQVLKFT-NGK 216 (334)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH----TTCS---EEEETTTSCHHHHHHHHT-TTS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH----cCCc---EEEeCCCchHHHHHHHHh-CCC
Confidence 45689999993 5677777788775 5799999999887766654 4532 222222222222222111 135
Q ss_pred ceeEEEEcCCccchHHHHHHHHhcCCCCeEEEEec
Q 025824 156 SFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYDN 190 (247)
Q Consensus 156 ~fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv~d~ 190 (247)
.+|+||-.... ..++.+.+.|++||.++.-.
T Consensus 217 g~D~vid~~g~----~~~~~~~~~l~~~G~iv~~G 247 (334)
T 3qwb_A 217 GVDASFDSVGK----DTFEISLAALKRKGVFVSFG 247 (334)
T ss_dssp CEEEEEECCGG----GGHHHHHHHEEEEEEEEECC
T ss_pred CceEEEECCCh----HHHHHHHHHhccCCEEEEEc
Confidence 79988754432 45677888999999998743
No 342
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=95.78 E-value=0.014 Score=49.91 Aligned_cols=99 Identities=10% Similarity=0.051 Sum_probs=63.6
Q ss_pred hcCCCEEEEEcc--cccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCC
Q 025824 77 LVNAKNTMEIGV--YTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNH 154 (247)
Q Consensus 77 ~~~~~~vLEiG~--g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~ 154 (247)
..+.++||-+|+ |.|..++.+++.. +.+|++++.+++..+.+++ .|.. .++..+ .+....+.... ..
T Consensus 157 ~~~g~~VlV~Gasg~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~----~ga~---~v~~~~-~~~~~~v~~~~-~~ 225 (342)
T 4eye_A 157 LRAGETVLVLGAAGGIGTAAIQIAKGM--GAKVIAVVNRTAATEFVKS----VGAD---IVLPLE-EGWAKAVREAT-GG 225 (342)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHH----HTCS---EEEESS-TTHHHHHHHHT-TT
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHh----cCCc---EEecCc-hhHHHHHHHHh-CC
Confidence 345689999996 5677788888876 5799999999998877765 3542 222222 22222222111 12
Q ss_pred CceeEEEEcCCccchHHHHHHHHhcCCCCeEEEEec
Q 025824 155 GSFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYDN 190 (247)
Q Consensus 155 ~~fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv~d~ 190 (247)
..+|+||-.... ..+..+.+.|+++|.++.-.
T Consensus 226 ~g~Dvvid~~g~----~~~~~~~~~l~~~G~iv~~G 257 (342)
T 4eye_A 226 AGVDMVVDPIGG----PAFDDAVRTLASEGRLLVVG 257 (342)
T ss_dssp SCEEEEEESCC------CHHHHHHTEEEEEEEEEC-
T ss_pred CCceEEEECCch----hHHHHHHHhhcCCCEEEEEE
Confidence 479988754432 24677888999999999744
No 343
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=95.73 E-value=0.086 Score=44.25 Aligned_cols=104 Identities=14% Similarity=0.113 Sum_probs=67.0
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCE-EEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCce
Q 025824 79 NAKNTMEIGVYTGYSLLATALALPDDGK-ILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSF 157 (247)
Q Consensus 79 ~~~~vLEiG~g~G~st~~la~~~~~~~~-v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~f 157 (247)
...+++|+-||.|..++-+.++-- ... +.++|+++..++..+.|+. ...++.+|..+....-..+ .+.+
T Consensus 15 ~~~~vidLFaG~GG~~~g~~~aG~-~~~~v~a~E~d~~a~~ty~~N~~------~~~~~~~DI~~i~~~~i~~---~~~~ 84 (295)
T 2qrv_A 15 KPIRVLSLFDGIATGLLVLKDLGI-QVDRYIASEVCEDSITVGMVRHQ------GKIMYVGDVRSVTQKHIQE---WGPF 84 (295)
T ss_dssp CCEEEEEETCTTTHHHHHHHHTTB-CEEEEEEECCCHHHHHHHHHHTT------TCEEEECCGGGCCHHHHHH---TCCC
T ss_pred CCCEEEEeCcCccHHHHHHHHCCC-ccceEEEEECCHHHHHHHHHhCC------CCceeCCChHHccHHHhcc---cCCc
Confidence 345899999999999988876511 122 6999999997776666542 2467789988765432211 2479
Q ss_pred eEEEEcCCcc-----------------chHHHHHHHHhcCCCCe------EEEEeccc
Q 025824 158 DFIFVDADKD-----------------NYLNYHKRLIELVKVGG------VIGYDNTL 192 (247)
Q Consensus 158 D~v~id~~~~-----------------~~~~~l~~~~~~L~~gG------~lv~d~~~ 192 (247)
|+++...++. .....+-.+.+.++|.. ++++.||-
T Consensus 85 Dll~ggpPCQ~fS~ag~~r~g~~d~r~~L~~~~~rii~~~~P~~~~~~P~~~l~ENV~ 142 (295)
T 2qrv_A 85 DLVIGGSPCNDLSIVNPARKGLYEGTGRLFFEFYRLLHDARPKEGDDRPFFWLFENVV 142 (295)
T ss_dssp SEEEECCCCGGGBTTCTTCCTTTSTTTTHHHHHHHHHHHHSCCTTCCCCCEEEEEEES
T ss_pred CEEEecCCCccccccCccccccccccchhHHHHHHHHHHhCcccccCCccEEEEEcCc
Confidence 9998764311 11112233445667762 88899984
No 344
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=95.72 E-value=0.0088 Score=50.92 Aligned_cols=54 Identities=15% Similarity=0.081 Sum_probs=41.3
Q ss_pred CcEEEE-EecchhhhHHHHhhhcCCCceeEEEEcCCccc--------------hHHHHHHHHhcCCCCeEEEEe
Q 025824 131 HKIDFR-EGPALPVLDLLIQDEKNHGSFDFIFVDADKDN--------------YLNYHKRLIELVKVGGVIGYD 189 (247)
Q Consensus 131 ~~i~~~-~gd~~~~l~~l~~~~~~~~~fD~v~id~~~~~--------------~~~~l~~~~~~L~~gG~lv~d 189 (247)
...+++ +||+.+.+..+ ..++||+||+|.+... ....+..+.++|+|||+|++.
T Consensus 37 ~~~~l~i~gD~l~~L~~l-----~~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~ 105 (319)
T 1eg2_A 37 TTRHVYDVCDCLDTLAKL-----PDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIF 105 (319)
T ss_dssp CEEEEEEECCHHHHHHTS-----CTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccceEEECCcHHHHHHhC-----ccCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 346788 99999888766 2568999999998321 235566777999999999874
No 345
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=95.68 E-value=0.023 Score=48.47 Aligned_cols=96 Identities=13% Similarity=-0.005 Sum_probs=65.4
Q ss_pred CCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCceeE
Q 025824 80 AKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDF 159 (247)
Q Consensus 80 ~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~fD~ 159 (247)
..+++|+.||+|..++-+.++ + -..+.++|+++..++..+.|+... . ++|..+..... ...+|+
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~a-G-~~~v~~~e~d~~a~~t~~~N~~~~-----~---~~Di~~~~~~~------~~~~D~ 74 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESC-G-AECVYSNEWDKYAQEVYEMNFGEK-----P---EGDITQVNEKT------IPDHDI 74 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHT-T-CEEEEEECCCHHHHHHHHHHHSCC-----C---BSCGGGSCGGG------SCCCSE
T ss_pred CCcEEEECCCcCHHHHHHHHC-C-CeEEEEEeCCHHHHHHHHHHcCCC-----C---cCCHHHcCHhh------CCCCCE
Confidence 468999999999999988765 1 235889999999998888887432 1 57877654432 346999
Q ss_pred EEEcCCcc----------------chHHHHHHHHhcCCCCeEEEEeccc
Q 025824 160 IFVDADKD----------------NYLNYHKRLIELVKVGGVIGYDNTL 192 (247)
Q Consensus 160 v~id~~~~----------------~~~~~l~~~~~~L~~gG~lv~d~~~ 192 (247)
|+.+.++. .....+-.+.+.++|. ++++.||-
T Consensus 75 l~~gpPCQ~fS~ag~~~g~~d~r~~L~~~~~r~i~~~~P~-~~~~ENV~ 122 (327)
T 2c7p_A 75 LCAGFPCQAFSISGKQKGFEDSRGTLFFDIARIVREKKPK-VVFMENVK 122 (327)
T ss_dssp EEEECCCTTTCTTSCCCGGGSTTSCHHHHHHHHHHHHCCS-EEEEEEEG
T ss_pred EEECCCCCCcchhcccCCCcchhhHHHHHHHHHHHhccCc-EEEEeCcH
Confidence 99875411 1112223344567886 66778873
No 346
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=95.57 E-value=0.013 Score=49.73 Aligned_cols=99 Identities=9% Similarity=0.063 Sum_probs=62.5
Q ss_pred cCCCEEEEEcc--cccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCC
Q 025824 78 VNAKNTMEIGV--YTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHG 155 (247)
Q Consensus 78 ~~~~~vLEiG~--g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~ 155 (247)
.+.++||-+|+ |.|..+..++... +.+|++++.+++..+.+++ .|.. . ++..+..+....+.... ...
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~a~~~--G~~Vi~~~~~~~~~~~~~~----~g~~--~-~~d~~~~~~~~~i~~~~-~~~ 213 (333)
T 1wly_A 144 KPGDYVLIHAAAGGMGHIMVPWARHL--GATVIGTVSTEEKAETARK----LGCH--H-TINYSTQDFAEVVREIT-GGK 213 (333)
T ss_dssp CTTCEEEETTTTSTTHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH----HTCS--E-EEETTTSCHHHHHHHHH-TTC
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH----cCCC--E-EEECCCHHHHHHHHHHh-CCC
Confidence 45678999994 6777777777765 5799999999887776654 3432 1 22211112222221111 124
Q ss_pred ceeEEEEcCCccchHHHHHHHHhcCCCCeEEEEec
Q 025824 156 SFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYDN 190 (247)
Q Consensus 156 ~fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv~d~ 190 (247)
.+|++|-.... ..++.+.+.|+++|.++.-.
T Consensus 214 ~~d~vi~~~g~----~~~~~~~~~l~~~G~iv~~g 244 (333)
T 1wly_A 214 GVDVVYDSIGK----DTLQKSLDCLRPRGMCAAYG 244 (333)
T ss_dssp CEEEEEECSCT----TTHHHHHHTEEEEEEEEECC
T ss_pred CCeEEEECCcH----HHHHHHHHhhccCCEEEEEe
Confidence 79998755432 45678889999999998643
No 347
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=95.55 E-value=0.0093 Score=50.56 Aligned_cols=99 Identities=10% Similarity=-0.011 Sum_probs=63.4
Q ss_pred cCCCEEEEEc--ccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCC
Q 025824 78 VNAKNTMEIG--VYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHG 155 (247)
Q Consensus 78 ~~~~~vLEiG--~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~ 155 (247)
.+.++||-+| .+.|..+..+++.. +.+|++++.+++..+.+++ .|.. .++..+..+....+.... ...
T Consensus 139 ~~g~~VlV~Ga~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~----~Ga~---~~~~~~~~~~~~~~~~~~-~~~ 208 (325)
T 3jyn_A 139 KPGEIILFHAAAGGVGSLACQWAKAL--GAKLIGTVSSPEKAAHAKA----LGAW---ETIDYSHEDVAKRVLELT-DGK 208 (325)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHH--TCEEEEEESSHHHHHHHHH----HTCS---EEEETTTSCHHHHHHHHT-TTC
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH----cCCC---EEEeCCCccHHHHHHHHh-CCC
Confidence 4567899998 35677777788775 5799999999987777654 4532 222222222222222111 134
Q ss_pred ceeEEEEcCCccchHHHHHHHHhcCCCCeEEEEec
Q 025824 156 SFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYDN 190 (247)
Q Consensus 156 ~fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv~d~ 190 (247)
.+|+||-.... ..+..+.+.|+++|.++.-.
T Consensus 209 g~Dvvid~~g~----~~~~~~~~~l~~~G~iv~~g 239 (325)
T 3jyn_A 209 KCPVVYDGVGQ----DTWLTSLDSVAPRGLVVSFG 239 (325)
T ss_dssp CEEEEEESSCG----GGHHHHHTTEEEEEEEEECC
T ss_pred CceEEEECCCh----HHHHHHHHHhcCCCEEEEEe
Confidence 79988754432 35677889999999999754
No 348
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=95.54 E-value=0.014 Score=50.33 Aligned_cols=101 Identities=14% Similarity=0.045 Sum_probs=64.3
Q ss_pred hcCCCEEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCC
Q 025824 77 LVNAKNTMEIGVYT-GYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHG 155 (247)
Q Consensus 77 ~~~~~~vLEiG~g~-G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~ 155 (247)
..+..+||-+|+|. |..++.+++.. +.+|++++.+++..+.+++ .|.. .++..+..+....+.... ...
T Consensus 187 ~~~g~~VlV~G~G~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~----lGa~---~vi~~~~~~~~~~v~~~~-~g~ 256 (363)
T 3uog_A 187 LRAGDRVVVQGTGGVALFGLQIAKAT--GAEVIVTSSSREKLDRAFA----LGAD---HGINRLEEDWVERVYALT-GDR 256 (363)
T ss_dssp CCTTCEEEEESSBHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHH----HTCS---EEEETTTSCHHHHHHHHH-TTC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc--CCEEEEEecCchhHHHHHH----cCCC---EEEcCCcccHHHHHHHHh-CCC
Confidence 34568999999764 66777788876 5799999999987777654 4652 222222122222222111 134
Q ss_pred ceeEEEEcCCccchHHHHHHHHhcCCCCeEEEEecc
Q 025824 156 SFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYDNT 191 (247)
Q Consensus 156 ~fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv~d~~ 191 (247)
.+|+||-.... ..+..+.+.|+++|.++.-..
T Consensus 257 g~D~vid~~g~----~~~~~~~~~l~~~G~iv~~G~ 288 (363)
T 3uog_A 257 GADHILEIAGG----AGLGQSLKAVAPDGRISVIGV 288 (363)
T ss_dssp CEEEEEEETTS----SCHHHHHHHEEEEEEEEEECC
T ss_pred CceEEEECCCh----HHHHHHHHHhhcCCEEEEEec
Confidence 79988754442 235677789999999987543
No 349
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=95.51 E-value=0.0099 Score=49.91 Aligned_cols=53 Identities=15% Similarity=0.139 Sum_probs=39.2
Q ss_pred CcEEEEEecchhhhHHHHhhhcCCCceeEEEEcCCcc---c--------------------hHHHHHHHHhcCCCCeEEE
Q 025824 131 HKIDFREGPALPVLDLLIQDEKNHGSFDFIFVDADKD---N--------------------YLNYHKRLIELVKVGGVIG 187 (247)
Q Consensus 131 ~~i~~~~gd~~~~l~~l~~~~~~~~~fD~v~id~~~~---~--------------------~~~~l~~~~~~L~~gG~lv 187 (247)
.++++++||+.+.++.+ .+++||+|+.|.+.. . +...+..+.++|+|||.++
T Consensus 20 ~~~~i~~gD~~~~l~~l-----~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~ 94 (297)
T 2zig_A 20 GVHRLHVGDAREVLASF-----PEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLV 94 (297)
T ss_dssp -CEEEEESCHHHHHTTS-----CTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEE
T ss_pred cCCEEEECcHHHHHhhC-----CCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEE
Confidence 46899999999877655 257999999998731 1 1234567779999999987
Q ss_pred E
Q 025824 188 Y 188 (247)
Q Consensus 188 ~ 188 (247)
+
T Consensus 95 i 95 (297)
T 2zig_A 95 I 95 (297)
T ss_dssp E
T ss_pred E
Confidence 6
No 350
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=95.47 E-value=0.014 Score=49.71 Aligned_cols=98 Identities=12% Similarity=0.060 Sum_probs=62.8
Q ss_pred hcCCCEEEEEcc--cccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEe---cchhhhHHHHhhh
Q 025824 77 LVNAKNTMEIGV--YTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREG---PALPVLDLLIQDE 151 (247)
Q Consensus 77 ~~~~~~vLEiG~--g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~g---d~~~~l~~l~~~~ 151 (247)
..+.++||-+|+ |.|..+..+++.. +++|++++.+++..+.+++ ..|.. ..+-.. +..+.+...
T Consensus 153 ~~~g~~vlI~Ga~g~iG~~~~~~a~~~--G~~V~~~~~~~~~~~~~~~---~~g~~--~~~d~~~~~~~~~~~~~~---- 221 (345)
T 2j3h_A 153 PKEGETVYVSAASGAVGQLVGQLAKMM--GCYVVGSAGSKEKVDLLKT---KFGFD--DAFNYKEESDLTAALKRC---- 221 (345)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH---TSCCS--EEEETTSCSCSHHHHHHH----
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH---HcCCc--eEEecCCHHHHHHHHHHH----
Confidence 345689999996 5677777777765 5799999999887666542 24542 111111 222222222
Q ss_pred cCCCceeEEEEcCCccchHHHHHHHHhcCCCCeEEEEec
Q 025824 152 KNHGSFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYDN 190 (247)
Q Consensus 152 ~~~~~fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv~d~ 190 (247)
..+.+|+||-.... ..++.+.+.|++||.++.-.
T Consensus 222 -~~~~~d~vi~~~g~----~~~~~~~~~l~~~G~~v~~G 255 (345)
T 2j3h_A 222 -FPNGIDIYFENVGG----KMLDAVLVNMNMHGRIAVCG 255 (345)
T ss_dssp -CTTCEEEEEESSCH----HHHHHHHTTEEEEEEEEECC
T ss_pred -hCCCCcEEEECCCH----HHHHHHHHHHhcCCEEEEEc
Confidence 12479998755432 46788889999999998643
No 351
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=95.46 E-value=0.031 Score=47.57 Aligned_cols=100 Identities=16% Similarity=0.097 Sum_probs=63.3
Q ss_pred hhcCCCEEEEEccc-ccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCC
Q 025824 76 KLVNAKNTMEIGVY-TGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNH 154 (247)
Q Consensus 76 ~~~~~~~vLEiG~g-~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~ 154 (247)
...+.++||-+|+| .|..++.+++.. +.+|++++.+++..+.+++ .|.. .++.-...+....+... .
T Consensus 161 ~~~~g~~VlV~GaG~vG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~----lGa~---~~~d~~~~~~~~~~~~~---~ 228 (339)
T 1rjw_A 161 GAKPGEWVAIYGIGGLGHVAVQYAKAM--GLNVVAVDIGDEKLELAKE----LGAD---LVVNPLKEDAAKFMKEK---V 228 (339)
T ss_dssp TCCTTCEEEEECCSTTHHHHHHHHHHT--TCEEEEECSCHHHHHHHHH----TTCS---EEECTTTSCHHHHHHHH---H
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH----CCCC---EEecCCCccHHHHHHHH---h
Confidence 44566899999985 466777787775 4699999999987776653 5542 12211111222222111 1
Q ss_pred CceeEEEEcCCccchHHHHHHHHhcCCCCeEEEEec
Q 025824 155 GSFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYDN 190 (247)
Q Consensus 155 ~~fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv~d~ 190 (247)
+.+|+||-... ....++.+.+.|+++|.++.-.
T Consensus 229 ~~~d~vid~~g---~~~~~~~~~~~l~~~G~~v~~g 261 (339)
T 1rjw_A 229 GGVHAAVVTAV---SKPAFQSAYNSIRRGGACVLVG 261 (339)
T ss_dssp SSEEEEEESSC---CHHHHHHHHHHEEEEEEEEECC
T ss_pred CCCCEEEECCC---CHHHHHHHHHHhhcCCEEEEec
Confidence 47998875443 2356778888999999998643
No 352
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=95.45 E-value=0.01 Score=63.24 Aligned_cols=102 Identities=13% Similarity=0.052 Sum_probs=54.5
Q ss_pred CCEEEEEcccccHHHHHHHhhCCC----CCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCC
Q 025824 80 AKNTMEIGVYTGYSLLATALALPD----DGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHG 155 (247)
Q Consensus 80 ~~~vLEiG~g~G~st~~la~~~~~----~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~ 155 (247)
..+|||||.|+|..+..+...+.. ..+++..|+++.+.+.|++.++... ++.-.-|..+. ..+ ...
T Consensus 1241 ~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~d----i~~~~~d~~~~-~~~-----~~~ 1310 (2512)
T 2vz8_A 1241 KMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQLH----VTQGQWDPANP-APG-----SLG 1310 (2512)
T ss_dssp EEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHHT----EEEECCCSSCC-CC---------
T ss_pred CceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhcc----ccccccccccc-ccC-----CCC
Confidence 468999999999988877776642 2378899999998888887776532 22211121110 000 135
Q ss_pred ceeEEEEcCC---ccchHHHHHHHHhcCCCCeEEEEecc
Q 025824 156 SFDFIFVDAD---KDNYLNYHKRLIELVKVGGVIGYDNT 191 (247)
Q Consensus 156 ~fD~v~id~~---~~~~~~~l~~~~~~L~~gG~lv~d~~ 191 (247)
.||+|+.... ..+....+..+.++|+|||.+++...
T Consensus 1311 ~ydlvia~~vl~~t~~~~~~l~~~~~lL~p~G~l~~~e~ 1349 (2512)
T 2vz8_A 1311 KADLLVCNCALATLGDPAVAVGNMAATLKEGGFLLLHTL 1349 (2512)
T ss_dssp -CCEEEEECC--------------------CCEEEEEEC
T ss_pred ceeEEEEcccccccccHHHHHHHHHHhcCCCcEEEEEec
Confidence 7999987543 23455678888899999999988654
No 353
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=95.41 E-value=0.034 Score=47.93 Aligned_cols=97 Identities=15% Similarity=0.128 Sum_probs=62.5
Q ss_pred CCCEEEEEc-c-cccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCc
Q 025824 79 NAKNTMEIG-V-YTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGS 156 (247)
Q Consensus 79 ~~~~vLEiG-~-g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~ 156 (247)
+..+||-+| + +.|..++.+++.+. +.+|++++.+++..+.+++ .|.. .++... .+....+... ..+.
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~-g~~Vi~~~~~~~~~~~~~~----lGad---~vi~~~-~~~~~~v~~~--~~~g 239 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRT-DLTVIATASRPETQEWVKS----LGAH---HVIDHS-KPLAAEVAAL--GLGA 239 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHC-CSEEEEECSSHHHHHHHHH----TTCS---EEECTT-SCHHHHHHTT--CSCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHHHH----cCCC---EEEeCC-CCHHHHHHHh--cCCC
Confidence 456899998 3 45778888888754 6799999999987776654 5642 122111 1222222211 1358
Q ss_pred eeEEEEcCCccchHHHHHHHHhcCCCCeEEEEe
Q 025824 157 FDFIFVDADKDNYLNYHKRLIELVKVGGVIGYD 189 (247)
Q Consensus 157 fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv~d 189 (247)
+|+||-... ....++.+.+.|+++|.++.-
T Consensus 240 ~Dvvid~~g---~~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 240 PAFVFSTTH---TDKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp EEEEEECSC---HHHHHHHHHHHSCTTCEEEEC
T ss_pred ceEEEECCC---chhhHHHHHHHhcCCCEEEEE
Confidence 998864332 345678888999999999864
No 354
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=95.36 E-value=0.01 Score=50.21 Aligned_cols=99 Identities=11% Similarity=0.032 Sum_probs=61.9
Q ss_pred cCCCEEEEEc--ccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCC
Q 025824 78 VNAKNTMEIG--VYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHG 155 (247)
Q Consensus 78 ~~~~~vLEiG--~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~ 155 (247)
.+.++||-+| .|.|..+..+++.. +.+|++++.+++..+.+++ .|.. .++..+-.+....+.... ...
T Consensus 139 ~~g~~vlV~Ga~ggiG~~~~~~a~~~--G~~V~~~~~~~~~~~~~~~----~g~~---~~~~~~~~~~~~~~~~~~-~~~ 208 (327)
T 1qor_A 139 KPDEQFLFHAAAGGVGLIACQWAKAL--GAKLIGTVGTAQKAQSALK----AGAW---QVINYREEDLVERLKEIT-GGK 208 (327)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHH--TCEEEEEESSHHHHHHHHH----HTCS---EEEETTTSCHHHHHHHHT-TTC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH----cCCC---EEEECCCccHHHHHHHHh-CCC
Confidence 4567999999 45666677777664 5799999999887776655 3432 122211112222222111 124
Q ss_pred ceeEEEEcCCccchHHHHHHHHhcCCCCeEEEEec
Q 025824 156 SFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYDN 190 (247)
Q Consensus 156 ~fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv~d~ 190 (247)
.+|++|-... ...++.+.+.|+++|.++.-.
T Consensus 209 ~~D~vi~~~g----~~~~~~~~~~l~~~G~iv~~g 239 (327)
T 1qor_A 209 KVRVVYDSVG----RDTWERSLDCLQRRGLMVSFG 239 (327)
T ss_dssp CEEEEEECSC----GGGHHHHHHTEEEEEEEEECC
T ss_pred CceEEEECCc----hHHHHHHHHHhcCCCEEEEEe
Confidence 6999876554 245677889999999998643
No 355
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=95.35 E-value=0.021 Score=48.78 Aligned_cols=102 Identities=15% Similarity=0.084 Sum_probs=63.4
Q ss_pred hhcCCCEEEEEccc--ccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcC
Q 025824 76 KLVNAKNTMEIGVY--TGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKN 153 (247)
Q Consensus 76 ~~~~~~~vLEiG~g--~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~ 153 (247)
...+.++||-+|+| .|..+..+++... +.+|++++.+++..+.+++ .|.. .++.....+....+... .
T Consensus 167 ~~~~g~~vlV~Gagg~iG~~~~~~a~~~~-Ga~Vi~~~~~~~~~~~~~~----~g~~---~~~~~~~~~~~~~~~~~--~ 236 (347)
T 1jvb_A 167 SLDPTKTLLVVGAGGGLGTMAVQIAKAVS-GATIIGVDVREEAVEAAKR----AGAD---YVINASMQDPLAEIRRI--T 236 (347)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHHT-CCEEEEEESSHHHHHHHHH----HTCS---EEEETTTSCHHHHHHHH--T
T ss_pred CCCCCCEEEEECCCccHHHHHHHHHHHcC-CCeEEEEcCCHHHHHHHHH----hCCC---EEecCCCccHHHHHHHH--h
Confidence 34466899999987 5556667776652 4699999999987776654 3532 12221111221111111 1
Q ss_pred C-CceeEEEEcCCccchHHHHHHHHhcCCCCeEEEEec
Q 025824 154 H-GSFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYDN 190 (247)
Q Consensus 154 ~-~~fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv~d~ 190 (247)
. +.+|+||-.... ...++.+.+.|+++|.++.-.
T Consensus 237 ~~~~~d~vi~~~g~---~~~~~~~~~~l~~~G~iv~~g 271 (347)
T 1jvb_A 237 ESKGVDAVIDLNNS---EKTLSVYPKALAKQGKYVMVG 271 (347)
T ss_dssp TTSCEEEEEESCCC---HHHHTTGGGGEEEEEEEEECC
T ss_pred cCCCceEEEECCCC---HHHHHHHHHHHhcCCEEEEEC
Confidence 2 579998755432 346778889999999998643
No 356
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=95.33 E-value=0.062 Score=45.84 Aligned_cols=92 Identities=17% Similarity=0.212 Sum_probs=62.9
Q ss_pred hhcCCCEEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCC
Q 025824 76 KLVNAKNTMEIGVYT-GYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNH 154 (247)
Q Consensus 76 ~~~~~~~vLEiG~g~-G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~ 154 (247)
...+..+||-+|+|. |..++.+++.. +.+|++++.+++..+.+++ .|.. .++ .+. +. + .
T Consensus 173 ~~~~g~~VlV~GaG~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~----lGa~---~v~-~~~-~~---~------~ 232 (348)
T 3two_A 173 KVTKGTKVGVAGFGGLGSMAVKYAVAM--GAEVSVFARNEHKKQDALS----MGVK---HFY-TDP-KQ---C------K 232 (348)
T ss_dssp TCCTTCEEEEESCSHHHHHHHHHHHHT--TCEEEEECSSSTTHHHHHH----TTCS---EEE-SSG-GG---C------C
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHh----cCCC---eec-CCH-HH---H------h
Confidence 445678999999864 67777888876 4699999999998877654 5642 222 332 21 1 2
Q ss_pred CceeEEEEcCCccchHHHHHHHHhcCCCCeEEEEec
Q 025824 155 GSFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYDN 190 (247)
Q Consensus 155 ~~fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv~d~ 190 (247)
..+|+||-..... ..++.+.+.|+++|.++.-.
T Consensus 233 ~~~D~vid~~g~~---~~~~~~~~~l~~~G~iv~~G 265 (348)
T 3two_A 233 EELDFIISTIPTH---YDLKDYLKLLTYNGDLALVG 265 (348)
T ss_dssp SCEEEEEECCCSC---CCHHHHHTTEEEEEEEEECC
T ss_pred cCCCEEEECCCcH---HHHHHHHHHHhcCCEEEEEC
Confidence 3799887433322 23567888999999999754
No 357
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=95.30 E-value=0.017 Score=49.57 Aligned_cols=98 Identities=13% Similarity=0.091 Sum_probs=62.5
Q ss_pred cCCCEEEEEc--ccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCC
Q 025824 78 VNAKNTMEIG--VYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHG 155 (247)
Q Consensus 78 ~~~~~vLEiG--~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~ 155 (247)
.+.++||-+| .|.|..++.+++.. +.+|++++.+++..+.+++ .|.. .++..+..+....+.... ..
T Consensus 166 ~~g~~VlV~Gg~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~----lGa~---~~~~~~~~~~~~~~~~~~--~~ 234 (353)
T 4dup_A 166 TEGESVLIHGGTSGIGTTAIQLARAF--GAEVYATAGSTGKCEACER----LGAK---RGINYRSEDFAAVIKAET--GQ 234 (353)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH----HTCS---EEEETTTSCHHHHHHHHH--SS
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHh----cCCC---EEEeCCchHHHHHHHHHh--CC
Confidence 4567899995 34677777788775 5799999999988777665 4542 222222222222222111 35
Q ss_pred ceeEEEEcCCccchHHHHHHHHhcCCCCeEEEEec
Q 025824 156 SFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYDN 190 (247)
Q Consensus 156 ~fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv~d~ 190 (247)
.+|+||-.... ..+..+.+.|+++|.++.-.
T Consensus 235 g~Dvvid~~g~----~~~~~~~~~l~~~G~iv~~g 265 (353)
T 4dup_A 235 GVDIILDMIGA----AYFERNIASLAKDGCLSIIA 265 (353)
T ss_dssp CEEEEEESCCG----GGHHHHHHTEEEEEEEEECC
T ss_pred CceEEEECCCH----HHHHHHHHHhccCCEEEEEE
Confidence 79988754443 24677888999999998643
No 358
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=95.30 E-value=0.017 Score=49.27 Aligned_cols=100 Identities=13% Similarity=0.062 Sum_probs=64.0
Q ss_pred hhcCCCEEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecc-hhhhHHHHhhhcC
Q 025824 76 KLVNAKNTMEIGVYT-GYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPA-LPVLDLLIQDEKN 153 (247)
Q Consensus 76 ~~~~~~~vLEiG~g~-G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~-~~~l~~l~~~~~~ 153 (247)
.. +..+||-+|+|. |..++.+++...++.+|++++.+++..+.+++ .|.. .++.-+. .+....+. .
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~----lGa~---~vi~~~~~~~~~~~~~----~ 235 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALE----LGAD---YVSEMKDAESLINKLT----D 235 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHH----HTCS---EEECHHHHHHHHHHHH----T
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHH----hCCC---EEeccccchHHHHHhh----c
Confidence 44 678999999853 66677788775124789999999987777654 4542 1221111 12233332 1
Q ss_pred CCceeEEEEcCCccchHHHHHHHHhcCCCCeEEEEec
Q 025824 154 HGSFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYDN 190 (247)
Q Consensus 154 ~~~fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv~d~ 190 (247)
...+|+||-... ....++.+.+.|+++|.++.-.
T Consensus 236 g~g~D~vid~~g---~~~~~~~~~~~l~~~G~iv~~g 269 (344)
T 2h6e_A 236 GLGASIAIDLVG---TEETTYNLGKLLAQEGAIILVG 269 (344)
T ss_dssp TCCEEEEEESSC---CHHHHHHHHHHEEEEEEEEECC
T ss_pred CCCccEEEECCC---ChHHHHHHHHHhhcCCEEEEeC
Confidence 237999875433 2346778889999999998643
No 359
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=95.27 E-value=0.07 Score=39.19 Aligned_cols=93 Identities=11% Similarity=0.010 Sum_probs=59.3
Q ss_pred CEEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhh--hHHHHhhhcCCCce
Q 025824 81 KNTMEIGVYTGYSLLATALALP-DDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPV--LDLLIQDEKNHGSF 157 (247)
Q Consensus 81 ~~vLEiG~g~G~st~~la~~~~-~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~--l~~l~~~~~~~~~f 157 (247)
.+|+-+|+ |..+..+++.+. .+..|+.+|.+++.++.+++ .| +.++.||+.+. +... .-..+
T Consensus 8 ~~viIiG~--G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~----~g----~~~i~gd~~~~~~l~~a-----~i~~a 72 (140)
T 3fwz_A 8 NHALLVGY--GRVGSLLGEKLLASDIPLVVIETSRTRVDELRE----RG----VRAVLGNAANEEIMQLA-----HLECA 72 (140)
T ss_dssp SCEEEECC--SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----TT----CEEEESCTTSHHHHHHT-----TGGGC
T ss_pred CCEEEECc--CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH----cC----CCEEECCCCCHHHHHhc-----CcccC
Confidence 57888886 666666665542 25689999999987766543 33 56788988542 3222 13578
Q ss_pred eEEEEcCCccchHHHHHHHHhcCCCCeEEEE
Q 025824 158 DFIFVDADKDNYLNYHKRLIELVKVGGVIGY 188 (247)
Q Consensus 158 D~v~id~~~~~~~~~l~~~~~~L~~gG~lv~ 188 (247)
|+|++-.+........-...+.+.|+..+++
T Consensus 73 d~vi~~~~~~~~n~~~~~~a~~~~~~~~iia 103 (140)
T 3fwz_A 73 KWLILTIPNGYEAGEIVASARAKNPDIEIIA 103 (140)
T ss_dssp SEEEECCSCHHHHHHHHHHHHHHCSSSEEEE
T ss_pred CEEEEECCChHHHHHHHHHHHHHCCCCeEEE
Confidence 9998766533322223334566778877764
No 360
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=95.24 E-value=0.1 Score=44.11 Aligned_cols=93 Identities=13% Similarity=-0.040 Sum_probs=62.9
Q ss_pred EEEEEcccccHHHHHHHhhCCCCC-EEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCceeEE
Q 025824 82 NTMEIGVYTGYSLLATALALPDDG-KILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDFI 160 (247)
Q Consensus 82 ~vLEiG~g~G~st~~la~~~~~~~-~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~fD~v 160 (247)
+|||+-||.|..++-+-++ +. .+.++|+++.+++.-+.|+. -+++.+|..+.-..- -..+|++
T Consensus 2 kvidLFsG~GG~~~G~~~a---G~~~v~a~e~d~~a~~ty~~N~~-------~~~~~~DI~~i~~~~------~~~~D~l 65 (331)
T 3ubt_Y 2 NLISLFSGAGGLDLGFQKA---GFRIICANEYDKSIWKTYESNHS-------AKLIKGDISKISSDE------FPKCDGI 65 (331)
T ss_dssp EEEEESCTTCHHHHHHHHT---TCEEEEEEECCTTTHHHHHHHCC-------SEEEESCGGGCCGGG------SCCCSEE
T ss_pred eEEEeCcCccHHHHHHHHC---CCEEEEEEeCCHHHHHHHHHHCC-------CCcccCChhhCCHhh------CCcccEE
Confidence 7999999999998887765 33 56799999998877776642 257789987654321 3578988
Q ss_pred EEcCCccc----------------hHHHHHHHHhcCCCCeEEEEecc
Q 025824 161 FVDADKDN----------------YLNYHKRLIELVKVGGVIGYDNT 191 (247)
Q Consensus 161 ~id~~~~~----------------~~~~l~~~~~~L~~gG~lv~d~~ 191 (247)
+...++.. ....+-.+.+.++|. ++++.||
T Consensus 66 ~ggpPCQ~fS~ag~~~g~~d~R~~L~~~~~r~i~~~~Pk-~~~~ENV 111 (331)
T 3ubt_Y 66 IGGPPSQSWSEGGSLRGIDDPRGKLFYEYIRILKQKKPI-FFLAENV 111 (331)
T ss_dssp ECCCCGGGTEETTEECCTTCGGGHHHHHHHHHHHHHCCS-EEEEEEC
T ss_pred EecCCCCCcCCCCCccCCCCchhHHHHHHHHHHhccCCe-EEEeeee
Confidence 76543111 112222344667886 6778888
No 361
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=95.08 E-value=0.03 Score=47.98 Aligned_cols=102 Identities=14% Similarity=0.049 Sum_probs=62.4
Q ss_pred hhcCC--CEEEEEcc--cccHHHHHHHhhCCCCC-EEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhh
Q 025824 76 KLVNA--KNTMEIGV--YTGYSLLATALALPDDG-KILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQD 150 (247)
Q Consensus 76 ~~~~~--~~vLEiG~--g~G~st~~la~~~~~~~-~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~ 150 (247)
...+. ++||-+|+ |.|..+..+++.. +. +|++++.+++..+.+++ ..|.. .++..+..+....+...
T Consensus 155 ~~~~g~~~~vlI~GasggiG~~~~~~a~~~--Ga~~Vi~~~~~~~~~~~~~~---~~g~~---~~~d~~~~~~~~~~~~~ 226 (357)
T 2zb4_A 155 HITAGSNKTMVVSGAAGACGSVAGQIGHFL--GCSRVVGICGTHEKCILLTS---ELGFD---AAINYKKDNVAEQLRES 226 (357)
T ss_dssp CCCTTSCCEEEESSTTBHHHHHHHHHHHHT--TCSEEEEEESCHHHHHHHHH---TSCCS---EEEETTTSCHHHHHHHH
T ss_pred CCCCCCccEEEEECCCcHHHHHHHHHHHHC--CCCeEEEEeCCHHHHHHHHH---HcCCc---eEEecCchHHHHHHHHh
Confidence 34456 89999996 5566666777664 46 99999999876655543 14542 12221111222222111
Q ss_pred hcCCCceeEEEEcCCccchHHHHHHHHhcCCCCeEEEEecc
Q 025824 151 EKNHGSFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYDNT 191 (247)
Q Consensus 151 ~~~~~~fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv~d~~ 191 (247)
. .+.+|++|-... ...++.+.+.|+++|.++.-..
T Consensus 227 ~--~~~~d~vi~~~G----~~~~~~~~~~l~~~G~iv~~G~ 261 (357)
T 2zb4_A 227 C--PAGVDVYFDNVG----GNISDTVISQMNENSHIILCGQ 261 (357)
T ss_dssp C--TTCEEEEEESCC----HHHHHHHHHTEEEEEEEEECCC
T ss_pred c--CCCCCEEEECCC----HHHHHHHHHHhccCcEEEEECC
Confidence 1 237999876554 2567888899999999986443
No 362
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=95.08 E-value=0.028 Score=48.73 Aligned_cols=102 Identities=14% Similarity=0.086 Sum_probs=62.2
Q ss_pred hcCCCEEEEEccc-ccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEec---chhhhHHHHhhhc
Q 025824 77 LVNAKNTMEIGVY-TGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGP---ALPVLDLLIQDEK 152 (247)
Q Consensus 77 ~~~~~~vLEiG~g-~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd---~~~~l~~l~~~~~ 152 (247)
..+..+||-+|+| .|..++.+++... ..+|++++.+++..+.++ +.|.. .++..+ ..+....+....
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~~~----~lGa~---~vi~~~~~~~~~~~~~v~~~~- 263 (380)
T 1vj0_A 193 SFAGKTVVIQGAGPLGLFGVVIARSLG-AENVIVIAGSPNRLKLAE----EIGAD---LTLNRRETSVEERRKAIMDIT- 263 (380)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHTT-BSEEEEEESCHHHHHHHH----HTTCS---EEEETTTSCHHHHHHHHHHHT-
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHcC-CceEEEEcCCHHHHHHHH----HcCCc---EEEeccccCcchHHHHHHHHh-
Confidence 3456789999965 4666777887753 259999999998777665 35642 222222 112222221111
Q ss_pred CCCceeEEEEcCCccchHHHHHHHHhcCCCCeEEEEec
Q 025824 153 NHGSFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYDN 190 (247)
Q Consensus 153 ~~~~fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv~d~ 190 (247)
....+|+||-.... ...++.+.+.|+++|.++.-.
T Consensus 264 ~g~g~Dvvid~~g~---~~~~~~~~~~l~~~G~iv~~G 298 (380)
T 1vj0_A 264 HGRGADFILEATGD---SRALLEGSELLRRGGFYSVAG 298 (380)
T ss_dssp TTSCEEEEEECSSC---TTHHHHHHHHEEEEEEEEECC
T ss_pred CCCCCcEEEECCCC---HHHHHHHHHHHhcCCEEEEEe
Confidence 12379998744322 234677888999999998643
No 363
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=95.05 E-value=0.083 Score=45.01 Aligned_cols=77 Identities=10% Similarity=-0.040 Sum_probs=53.3
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEE-EEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCce
Q 025824 79 NAKNTMEIGVYTGYSLLATALALPDDGKI-LAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSF 157 (247)
Q Consensus 79 ~~~~vLEiG~g~G~st~~la~~~~~~~~v-~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~f 157 (247)
++-+++|+.||.|..++-+..+--+.-.+ .++|+++..++..+.|+... ++.+|..+....-.. ...+
T Consensus 9 ~~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~~-------~~~~DI~~~~~~~i~----~~~~ 77 (327)
T 3qv2_A 9 KQVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKEE-------VQVKNLDSISIKQIE----SLNC 77 (327)
T ss_dssp CCEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCCC-------CBCCCTTTCCHHHHH----HTCC
T ss_pred CCCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCCC-------cccCChhhcCHHHhc----cCCC
Confidence 34589999999999999887752101346 69999999888888886431 556787765433211 1368
Q ss_pred eEEEEcCCc
Q 025824 158 DFIFVDADK 166 (247)
Q Consensus 158 D~v~id~~~ 166 (247)
|+++...++
T Consensus 78 Dil~ggpPC 86 (327)
T 3qv2_A 78 NTWFMSPPC 86 (327)
T ss_dssp CEEEECCCC
T ss_pred CEEEecCCc
Confidence 999876653
No 364
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=94.94 E-value=0.025 Score=48.52 Aligned_cols=99 Identities=16% Similarity=0.134 Sum_probs=61.8
Q ss_pred cCCCEEEEEcc--cccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCC
Q 025824 78 VNAKNTMEIGV--YTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHG 155 (247)
Q Consensus 78 ~~~~~vLEiG~--g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~ 155 (247)
.+.++||-+|+ |.|..+..+++.. +++|++++.+++..+.++ ..|.. .++..+..+....+.... ...
T Consensus 169 ~~g~~vlV~GasggiG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~----~~ga~---~~~d~~~~~~~~~~~~~~-~~~ 238 (351)
T 1yb5_A 169 KAGESVLVHGASGGVGLAACQIARAY--GLKILGTAGTEEGQKIVL----QNGAH---EVFNHREVNYIDKIKKYV-GEK 238 (351)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHH----HTTCS---EEEETTSTTHHHHHHHHH-CTT
T ss_pred CCcCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCChhHHHHHH----HcCCC---EEEeCCCchHHHHHHHHc-CCC
Confidence 45679999996 5666777777765 579999999988776554 34542 122222122222222111 124
Q ss_pred ceeEEEEcCCccchHHHHHHHHhcCCCCeEEEEec
Q 025824 156 SFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYDN 190 (247)
Q Consensus 156 ~fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv~d~ 190 (247)
.+|+||-.... ..+..+.+.|+++|.++.-.
T Consensus 239 ~~D~vi~~~G~----~~~~~~~~~l~~~G~iv~~g 269 (351)
T 1yb5_A 239 GIDIIIEMLAN----VNLSKDLSLLSHGGRVIVVG 269 (351)
T ss_dssp CEEEEEESCHH----HHHHHHHHHEEEEEEEEECC
T ss_pred CcEEEEECCCh----HHHHHHHHhccCCCEEEEEe
Confidence 79988754432 34677889999999998643
No 365
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=94.90 E-value=0.087 Score=43.93 Aligned_cols=92 Identities=16% Similarity=0.180 Sum_probs=61.9
Q ss_pred hcCCCEEEEEcc--cccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecc-hhhhHHHHhhhcC
Q 025824 77 LVNAKNTMEIGV--YTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPA-LPVLDLLIQDEKN 153 (247)
Q Consensus 77 ~~~~~~vLEiG~--g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~-~~~l~~l~~~~~~ 153 (247)
..+.++||-+|+ |.|..++.+++.. +.+|++++.+++..+.+++ .|.. .++..+. .+....
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~----~ga~---~~~~~~~~~~~~~~------- 186 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAM--GLRVLAAASRPEKLALPLA----LGAE---EAATYAEVPERAKA------- 186 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHT--TCEEEEEESSGGGSHHHHH----TTCS---EEEEGGGHHHHHHH-------
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHh----cCCC---EEEECCcchhHHHH-------
Confidence 345689999997 5677778888875 4699999999987776644 4542 2222111 122222
Q ss_pred CCceeEEEEcCCccchHHHHHHHHhcCCCCeEEEEe
Q 025824 154 HGSFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYD 189 (247)
Q Consensus 154 ~~~fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv~d 189 (247)
-..+|+||- ... ..++.+.+.|+++|.++.-
T Consensus 187 ~~~~d~vid-~g~----~~~~~~~~~l~~~G~~v~~ 217 (302)
T 1iz0_A 187 WGGLDLVLE-VRG----KEVEESLGLLAHGGRLVYI 217 (302)
T ss_dssp TTSEEEEEE-CSC----TTHHHHHTTEEEEEEEEEC
T ss_pred hcCceEEEE-CCH----HHHHHHHHhhccCCEEEEE
Confidence 157999886 543 3567888999999999864
No 366
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=94.90 E-value=0.029 Score=47.83 Aligned_cols=99 Identities=9% Similarity=0.065 Sum_probs=62.9
Q ss_pred cCCCEEEEEcc--cccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCC
Q 025824 78 VNAKNTMEIGV--YTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHG 155 (247)
Q Consensus 78 ~~~~~vLEiG~--g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~ 155 (247)
.+.++||-+|+ |.|..++.+++.. +.+|++++.+++..+.+++ .|.. .++..+..+....+.... ...
T Consensus 165 ~~g~~vlV~Gasg~iG~~~~~~a~~~--G~~Vi~~~~~~~~~~~~~~----~ga~---~~~d~~~~~~~~~~~~~~-~~~ 234 (343)
T 2eih_A 165 RPGDDVLVMAAGSGVSVAAIQIAKLF--GARVIATAGSEDKLRRAKA----LGAD---ETVNYTHPDWPKEVRRLT-GGK 234 (343)
T ss_dssp CTTCEEEECSTTSTTHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH----HTCS---EEEETTSTTHHHHHHHHT-TTT
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHh----cCCC---EEEcCCcccHHHHHHHHh-CCC
Confidence 45679999998 5777888888775 5799999999988777654 3532 122211112222221110 124
Q ss_pred ceeEEEEcCCccchHHHHHHHHhcCCCCeEEEEec
Q 025824 156 SFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYDN 190 (247)
Q Consensus 156 ~fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv~d~ 190 (247)
.+|+||-... . ..++.+.+.|+++|.++.-.
T Consensus 235 ~~d~vi~~~g-~---~~~~~~~~~l~~~G~~v~~g 265 (343)
T 2eih_A 235 GADKVVDHTG-A---LYFEGVIKATANGGRIAIAG 265 (343)
T ss_dssp CEEEEEESSC-S---SSHHHHHHHEEEEEEEEESS
T ss_pred CceEEEECCC-H---HHHHHHHHhhccCCEEEEEe
Confidence 7999986554 2 24567778899999998643
No 367
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=94.89 E-value=0.1 Score=44.66 Aligned_cols=93 Identities=11% Similarity=0.100 Sum_probs=57.9
Q ss_pred CEEEEEccc-ccHHH-HHHH-hhCCCCCE-EEEEeCCcc---hHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcC
Q 025824 81 KNTMEIGVY-TGYSL-LATA-LALPDDGK-ILAMDINRE---NYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKN 153 (247)
Q Consensus 81 ~~vLEiG~g-~G~st-~~la-~~~~~~~~-v~~iD~~~~---~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~ 153 (247)
.+||-+|+| .|..+ +.++ +.+ +.+ |++++.+++ ..+.+++ .|. +.+.....+..+ +..+
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~--Ga~~Vi~~~~~~~~~~~~~~~~~----lGa-~~v~~~~~~~~~-i~~~------ 239 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDK--GYENLYCLGRRDRPDPTIDIIEE----LDA-TYVDSRQTPVED-VPDV------ 239 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTT--CCCEEEEEECCCSSCHHHHHHHH----TTC-EEEETTTSCGGG-HHHH------
T ss_pred CEEEEECCCHHHHHHHHHHHHHHc--CCcEEEEEeCCcccHHHHHHHHH----cCC-cccCCCccCHHH-HHHh------
Confidence 899999974 35566 6677 655 455 999999988 7776653 564 112000112222 2222
Q ss_pred CCceeEEEEcCCccchHHHHHHHHhcCCCCeEEEEec
Q 025824 154 HGSFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYDN 190 (247)
Q Consensus 154 ~~~fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv~d~ 190 (247)
.+.+|+||-... ....++.+.+.|+++|.++.-.
T Consensus 240 ~gg~Dvvid~~g---~~~~~~~~~~~l~~~G~iv~~g 273 (357)
T 2b5w_A 240 YEQMDFIYEATG---FPKHAIQSVQALAPNGVGALLG 273 (357)
T ss_dssp SCCEEEEEECSC---CHHHHHHHHHHEEEEEEEEECC
T ss_pred CCCCCEEEECCC---ChHHHHHHHHHHhcCCEEEEEe
Confidence 137998874332 2345778889999999998643
No 368
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=94.80 E-value=0.043 Score=46.87 Aligned_cols=99 Identities=13% Similarity=0.070 Sum_probs=61.6
Q ss_pred CCCEEEEEccc-ccHHHHHHHhhCCCCC-EEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCc
Q 025824 79 NAKNTMEIGVY-TGYSLLATALALPDDG-KILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGS 156 (247)
Q Consensus 79 ~~~~vLEiG~g-~G~st~~la~~~~~~~-~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~ 156 (247)
+.++||-+|+| .|..++.+++.. +. +|++++.+++..+.+++ .|.. .++..+..+....+.... ....
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~--Ga~~Vi~~~~~~~~~~~~~~----~Ga~---~~~~~~~~~~~~~v~~~~-~g~g 236 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKAS--GAYPVIVSEPSDFRRELAKK----VGAD---YVINPFEEDVVKEVMDIT-DGNG 236 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHT--TCCSEEEECSCHHHHHHHHH----HTCS---EEECTTTSCHHHHHHHHT-TTSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHc--CCCEEEEECCCHHHHHHHHH----hCCC---EEECCCCcCHHHHHHHHc-CCCC
Confidence 56789999985 366677777775 45 89999999887776654 4542 122211112222221110 1246
Q ss_pred eeEEEEcCCccchHHHHHHHHhcCCCCeEEEEec
Q 025824 157 FDFIFVDADKDNYLNYHKRLIELVKVGGVIGYDN 190 (247)
Q Consensus 157 fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv~d~ 190 (247)
+|+||-... ....++.+.+.|+++|.++.-.
T Consensus 237 ~D~vid~~g---~~~~~~~~~~~l~~~G~iv~~g 267 (348)
T 2d8a_A 237 VDVFLEFSG---APKALEQGLQAVTPAGRVSLLG 267 (348)
T ss_dssp EEEEEECSC---CHHHHHHHHHHEEEEEEEEECC
T ss_pred CCEEEECCC---CHHHHHHHHHHHhcCCEEEEEc
Confidence 999875433 2456778889999999998643
No 369
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=94.73 E-value=0.075 Score=45.57 Aligned_cols=99 Identities=16% Similarity=0.066 Sum_probs=62.5
Q ss_pred hhcCCCEEEEEccc-ccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecch-hhhHHHHhhhcC
Q 025824 76 KLVNAKNTMEIGVY-TGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPAL-PVLDLLIQDEKN 153 (247)
Q Consensus 76 ~~~~~~~vLEiG~g-~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~-~~l~~l~~~~~~ 153 (247)
...+..+||-+|+| .|..++.+++.. +.+|++++.+++..+.+++ .|.. .++.-+.. +....+
T Consensus 176 ~~~~g~~VlV~GaG~vG~~~~qlak~~--Ga~Vi~~~~~~~~~~~~~~----lGa~---~v~~~~~~~~~~~~~------ 240 (360)
T 1piw_A 176 GCGPGKKVGIVGLGGIGSMGTLISKAM--GAETYVISRSSRKREDAMK----MGAD---HYIATLEEGDWGEKY------ 240 (360)
T ss_dssp TCSTTCEEEEECCSHHHHHHHHHHHHH--TCEEEEEESSSTTHHHHHH----HTCS---EEEEGGGTSCHHHHS------
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHH----cCCC---EEEcCcCchHHHHHh------
Confidence 44566899999974 366677777765 5689999999998877765 4542 22222211 222332
Q ss_pred CCceeEEEEcCCccchHHHHHHHHhcCCCCeEEEEec
Q 025824 154 HGSFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYDN 190 (247)
Q Consensus 154 ~~~fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv~d~ 190 (247)
.+.+|+||-..... ....++.+.+.|++||.++.-.
T Consensus 241 ~~~~D~vid~~g~~-~~~~~~~~~~~l~~~G~iv~~g 276 (360)
T 1piw_A 241 FDTFDLIVVCASSL-TDIDFNIMPKAMKVGGRIVSIS 276 (360)
T ss_dssp CSCEEEEEECCSCS-TTCCTTTGGGGEEEEEEEEECC
T ss_pred hcCCCEEEECCCCC-cHHHHHHHHHHhcCCCEEEEec
Confidence 25799987543320 0123456778999999998643
No 370
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=94.66 E-value=0.092 Score=44.76 Aligned_cols=95 Identities=19% Similarity=0.184 Sum_probs=60.8
Q ss_pred CCCEEEEEc-c-cccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCc
Q 025824 79 NAKNTMEIG-V-YTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGS 156 (247)
Q Consensus 79 ~~~~vLEiG-~-g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~ 156 (247)
+.++||-+| + +.|..++.+++.. +++|++++.+++..+.+++ .|.. .++..+ .+....+... ....
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~----lGa~---~vi~~~-~~~~~~~~~~--~~~g 217 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAY--GLRVITTASRNETIEWTKK----MGAD---IVLNHK-ESLLNQFKTQ--GIEL 217 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEECCSHHHHHHHHH----HTCS---EEECTT-SCHHHHHHHH--TCCC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHh----cCCc---EEEECC-ccHHHHHHHh--CCCC
Confidence 567899994 3 3566777788765 5799999999987777665 4542 121111 1222222211 1457
Q ss_pred eeEEEEcCCccchHHHHHHHHhcCCCCeEEEE
Q 025824 157 FDFIFVDADKDNYLNYHKRLIELVKVGGVIGY 188 (247)
Q Consensus 157 fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv~ 188 (247)
+|+||-... ....++.+.+.|+++|.++.
T Consensus 218 ~Dvv~d~~g---~~~~~~~~~~~l~~~G~iv~ 246 (346)
T 3fbg_A 218 VDYVFCTFN---TDMYYDDMIQLVKPRGHIAT 246 (346)
T ss_dssp EEEEEESSC---HHHHHHHHHHHEEEEEEEEE
T ss_pred ccEEEECCC---chHHHHHHHHHhccCCEEEE
Confidence 998874332 34567888899999999975
No 371
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=94.50 E-value=0.051 Score=46.57 Aligned_cols=99 Identities=7% Similarity=-0.013 Sum_probs=61.4
Q ss_pred cCCCEEEEEcc--cccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCC
Q 025824 78 VNAKNTMEIGV--YTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHG 155 (247)
Q Consensus 78 ~~~~~vLEiG~--g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~ 155 (247)
.+.++||-+|+ |.|..+..++... +++|++++.+++..+.+++ .|.. .++..+..+....+.... ...
T Consensus 161 ~~g~~vlV~Ga~ggiG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~----~g~~---~~~~~~~~~~~~~~~~~~-~~~ 230 (354)
T 2j8z_A 161 QAGDYVLIHAGLSGVGTAAIQLTRMA--GAIPLVTAGSQKKLQMAEK----LGAA---AGFNYKKEDFSEATLKFT-KGA 230 (354)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHH----HTCS---EEEETTTSCHHHHHHHHT-TTS
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH----cCCc---EEEecCChHHHHHHHHHh-cCC
Confidence 45678999983 5666777777765 5799999999987776643 3432 122222122222222111 124
Q ss_pred ceeEEEEcCCccchHHHHHHHHhcCCCCeEEEEec
Q 025824 156 SFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYDN 190 (247)
Q Consensus 156 ~fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv~d~ 190 (247)
.+|++|-..... .+..+.+.|+++|.++.-.
T Consensus 231 ~~d~vi~~~G~~----~~~~~~~~l~~~G~iv~~G 261 (354)
T 2j8z_A 231 GVNLILDCIGGS----YWEKNVNCLALDGRWVLYG 261 (354)
T ss_dssp CEEEEEESSCGG----GHHHHHHHEEEEEEEEECC
T ss_pred CceEEEECCCch----HHHHHHHhccCCCEEEEEe
Confidence 799987655432 4567788999999998743
No 372
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=94.43 E-value=0.18 Score=43.46 Aligned_cols=98 Identities=10% Similarity=0.033 Sum_probs=61.0
Q ss_pred cCCCEEEEEcc--cccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCC
Q 025824 78 VNAKNTMEIGV--YTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHG 155 (247)
Q Consensus 78 ~~~~~vLEiG~--g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~ 155 (247)
.+..+||-+|+ +.|..++.+++.. +.+|+++. +++..+.++ ..|.. .++.....+....+... ..+
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~--Ga~Vi~~~-~~~~~~~~~----~lGa~---~vi~~~~~~~~~~v~~~--t~g 230 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLS--GYIPIATC-SPHNFDLAK----SRGAE---EVFDYRAPNLAQTIRTY--TKN 230 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEE-CGGGHHHHH----HTTCS---EEEETTSTTHHHHHHHH--TTT
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHC--CCEEEEEe-CHHHHHHHH----HcCCc---EEEECCCchHHHHHHHH--ccC
Confidence 45678999998 3788888888876 56888885 777666554 46652 23322222222222211 134
Q ss_pred ceeEEEEcCCccchHHHHHHHHhcC-CCCeEEEEec
Q 025824 156 SFDFIFVDADKDNYLNYHKRLIELV-KVGGVIGYDN 190 (247)
Q Consensus 156 ~fD~v~id~~~~~~~~~l~~~~~~L-~~gG~lv~d~ 190 (247)
.+|+||-... ....++.+.+.| ++||.++.-.
T Consensus 231 ~~d~v~d~~g---~~~~~~~~~~~l~~~~G~iv~~g 263 (371)
T 3gqv_A 231 NLRYALDCIT---NVESTTFCFAAIGRAGGHYVSLN 263 (371)
T ss_dssp CCCEEEESSC---SHHHHHHHHHHSCTTCEEEEESS
T ss_pred CccEEEECCC---chHHHHHHHHHhhcCCCEEEEEe
Confidence 5998874332 245567778888 6999998744
No 373
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=94.41 E-value=0.08 Score=45.09 Aligned_cols=96 Identities=15% Similarity=0.117 Sum_probs=60.9
Q ss_pred hcCCCEEEEEcc--cccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCC
Q 025824 77 LVNAKNTMEIGV--YTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNH 154 (247)
Q Consensus 77 ~~~~~~vLEiG~--g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~ 154 (247)
..+.++||-+|+ +.|..++.+++.. +++|+++ .+++..+.+++ .|... +. +..+....+.... ..
T Consensus 148 ~~~g~~VlV~Ga~g~iG~~~~q~a~~~--Ga~Vi~~-~~~~~~~~~~~----lGa~~----i~-~~~~~~~~~~~~~-~~ 214 (343)
T 3gaz_A 148 VQDGQTVLIQGGGGGVGHVAIQIALAR--GARVFAT-ARGSDLEYVRD----LGATP----ID-ASREPEDYAAEHT-AG 214 (343)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEE-ECHHHHHHHHH----HTSEE----EE-TTSCHHHHHHHHH-TT
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHC--CCEEEEE-eCHHHHHHHHH----cCCCE----ec-cCCCHHHHHHHHh-cC
Confidence 345689999993 4677788888875 5799999 88876665544 46422 22 2222222221111 13
Q ss_pred CceeEEEEcCCccchHHHHHHHHhcCCCCeEEEEe
Q 025824 155 GSFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYD 189 (247)
Q Consensus 155 ~~fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv~d 189 (247)
..+|+||-.... ..+..+.+.|+++|.++.-
T Consensus 215 ~g~D~vid~~g~----~~~~~~~~~l~~~G~iv~~ 245 (343)
T 3gaz_A 215 QGFDLVYDTLGG----PVLDASFSAVKRFGHVVSC 245 (343)
T ss_dssp SCEEEEEESSCT----HHHHHHHHHEEEEEEEEES
T ss_pred CCceEEEECCCc----HHHHHHHHHHhcCCeEEEE
Confidence 579988744332 4677888899999999863
No 374
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=94.14 E-value=0.074 Score=44.87 Aligned_cols=93 Identities=8% Similarity=0.016 Sum_probs=57.6
Q ss_pred EEEEEcc--cccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCceeE
Q 025824 82 NTMEIGV--YTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDF 159 (247)
Q Consensus 82 ~vLEiG~--g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~fD~ 159 (247)
+||-+|+ |.|..++.+++.. +++|++++.+++..+.+++ .|...-+.....+ .+.+..+ ....+|+
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~--Ga~vi~~~~~~~~~~~~~~----lGa~~~i~~~~~~-~~~~~~~-----~~~~~d~ 219 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKR--GYTVEASTGKAAEHDYLRV----LGAKEVLAREDVM-AERIRPL-----DKQRWAA 219 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHT--TCCEEEEESCTTCHHHHHH----TTCSEEEECC----------C-----CSCCEEE
T ss_pred eEEEecCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHH----cCCcEEEecCCcH-HHHHHHh-----cCCcccE
Confidence 7999996 5677778888876 4789999999888777654 4542111111111 1112221 1347998
Q ss_pred EEEcCCccchHHHHHHHHhcCCCCeEEEEec
Q 025824 160 IFVDADKDNYLNYHKRLIELVKVGGVIGYDN 190 (247)
Q Consensus 160 v~id~~~~~~~~~l~~~~~~L~~gG~lv~d~ 190 (247)
||-.... ..+..+.+.|+++|.++.-.
T Consensus 220 vid~~g~----~~~~~~~~~l~~~G~~v~~G 246 (328)
T 1xa0_A 220 AVDPVGG----RTLATVLSRMRYGGAVAVSG 246 (328)
T ss_dssp EEECSTT----TTHHHHHHTEEEEEEEEECS
T ss_pred EEECCcH----HHHHHHHHhhccCCEEEEEe
Confidence 8743332 24677888999999998643
No 375
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=93.85 E-value=0.29 Score=35.60 Aligned_cols=93 Identities=16% Similarity=0.111 Sum_probs=55.9
Q ss_pred CCEEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhh--hHHHHhhhcCCCc
Q 025824 80 AKNTMEIGVYTGYSLLATALALP-DDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPV--LDLLIQDEKNHGS 156 (247)
Q Consensus 80 ~~~vLEiG~g~G~st~~la~~~~-~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~--l~~l~~~~~~~~~ 156 (247)
.++|+-+|+ |..+..+++.+. .+.+|+.+|.+++.++.+++ .+ +.++.+|..+. +... ....
T Consensus 6 ~~~v~I~G~--G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~----~~----~~~~~gd~~~~~~l~~~-----~~~~ 70 (141)
T 3llv_A 6 RYEYIVIGS--EAAGVGLVRELTAAGKKVLAVDKSKEKIELLED----EG----FDAVIADPTDESFYRSL-----DLEG 70 (141)
T ss_dssp CCSEEEECC--SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----TT----CEEEECCTTCHHHHHHS-----CCTT
T ss_pred CCEEEEECC--CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH----CC----CcEEECCCCCHHHHHhC-----Cccc
Confidence 357888986 667777666553 25689999999987655443 23 57788888653 2222 1357
Q ss_pred eeEEEEcCCccchHHHHHHHHhcCCCCeEEEE
Q 025824 157 FDFIFVDADKDNYLNYHKRLIELVKVGGVIGY 188 (247)
Q Consensus 157 fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv~ 188 (247)
+|+|++-.+........-...+.+. ...+++
T Consensus 71 ~d~vi~~~~~~~~n~~~~~~a~~~~-~~~iia 101 (141)
T 3llv_A 71 VSAVLITGSDDEFNLKILKALRSVS-DVYAIV 101 (141)
T ss_dssp CSEEEECCSCHHHHHHHHHHHHHHC-CCCEEE
T ss_pred CCEEEEecCCHHHHHHHHHHHHHhC-CceEEE
Confidence 8999886653222222333334455 444443
No 376
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=93.77 E-value=0.69 Score=36.76 Aligned_cols=95 Identities=15% Similarity=0.026 Sum_probs=61.2
Q ss_pred CCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCceeE
Q 025824 80 AKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDF 159 (247)
Q Consensus 80 ~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~fD~ 159 (247)
.++|+=+|+ |..+..+++.+...+.|+.+|.+++.++.++ . .+.++.||+.+. ..+... .-...|.
T Consensus 9 ~~~viI~G~--G~~G~~la~~L~~~g~v~vid~~~~~~~~~~-----~----~~~~i~gd~~~~-~~l~~a--~i~~ad~ 74 (234)
T 2aef_A 9 SRHVVICGW--SESTLECLRELRGSEVFVLAEDENVRKKVLR-----S----GANFVHGDPTRV-SDLEKA--NVRGARA 74 (234)
T ss_dssp -CEEEEESC--CHHHHHHHHHSTTSEEEEEESCGGGHHHHHH-----T----TCEEEESCTTCH-HHHHHT--TCTTCSE
T ss_pred CCEEEEECC--ChHHHHHHHHHHhCCeEEEEECCHHHHHHHh-----c----CCeEEEcCCCCH-HHHHhc--CcchhcE
Confidence 468898885 7888888888764333999999998665443 2 367889998642 222111 1457899
Q ss_pred EEEcCCccchHHHHHHHHhcCCCCeEEEE
Q 025824 160 IFVDADKDNYLNYHKRLIELVKVGGVIGY 188 (247)
Q Consensus 160 v~id~~~~~~~~~l~~~~~~L~~gG~lv~ 188 (247)
|++-.+............+.+.|+..+++
T Consensus 75 vi~~~~~d~~n~~~~~~a~~~~~~~~iia 103 (234)
T 2aef_A 75 VIVDLESDSETIHCILGIRKIDESVRIIA 103 (234)
T ss_dssp EEECCSCHHHHHHHHHHHHHHCSSSEEEE
T ss_pred EEEcCCCcHHHHHHHHHHHHHCCCCeEEE
Confidence 98866543333344445566788766665
No 377
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=93.60 E-value=0.094 Score=44.77 Aligned_cols=102 Identities=16% Similarity=0.096 Sum_probs=65.6
Q ss_pred CCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCceeE
Q 025824 80 AKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDF 159 (247)
Q Consensus 80 ~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~fD~ 159 (247)
+-+++|+.||.|..+.-+..+--..-.+.++|+++..++.-+.|+.. ..++.+|..+..+.-.. ...+|+
T Consensus 3 ~~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~~------~~~~~~DI~~~~~~~~~----~~~~D~ 72 (333)
T 4h0n_A 3 SHKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFPE------TNLLNRNIQQLTPQVIK----KWNVDT 72 (333)
T ss_dssp CEEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTT------SCEECCCGGGCCHHHHH----HTTCCE
T ss_pred CCEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCCC------CceeccccccCCHHHhc----cCCCCE
Confidence 35799999999999998877521013578999999987777776532 34667888775443221 236899
Q ss_pred EEEcCCcc----------------chHHHHHHHHhcCC-CCeEEEEeccc
Q 025824 160 IFVDADKD----------------NYLNYHKRLIELVK-VGGVIGYDNTL 192 (247)
Q Consensus 160 v~id~~~~----------------~~~~~l~~~~~~L~-~gG~lv~d~~~ 192 (247)
++...++. .....+-.+.+.++ |. ++++.||-
T Consensus 73 l~ggpPCQ~fS~ag~~~~~~d~r~~L~~~~~r~i~~~~~P~-~~vlENV~ 121 (333)
T 4h0n_A 73 ILMSPPCQPFTRNGKYLDDNDPRTNSFLYLIGILDQLDNVD-YILMENVK 121 (333)
T ss_dssp EEECCCCCCSEETTEECCTTCTTSCCHHHHHHHGGGCTTCC-EEEEEECT
T ss_pred EEecCCCcchhhhhhccCCcCcccccHHHHHHHHHHhcCCC-EEEEecch
Confidence 98765411 11222333445665 75 66788874
No 378
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=93.50 E-value=0.4 Score=35.47 Aligned_cols=99 Identities=10% Similarity=0.009 Sum_probs=60.0
Q ss_pred CCEEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCc-chHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCce
Q 025824 80 AKNTMEIGVYTGYSLLATALALP-DDGKILAMDINR-ENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSF 157 (247)
Q Consensus 80 ~~~vLEiG~g~G~st~~la~~~~-~~~~v~~iD~~~-~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~f 157 (247)
.++|+-+|+ |..+..+++.+. .+.+|+.+|.++ +.++...+... ..+.++.||+.+. ..+... .-...
T Consensus 3 ~~~vlI~G~--G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~-----~~~~~i~gd~~~~-~~l~~a--~i~~a 72 (153)
T 1id1_A 3 KDHFIVCGH--SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLG-----DNADVIPGDSNDS-SVLKKA--GIDRC 72 (153)
T ss_dssp CSCEEEECC--SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHC-----TTCEEEESCTTSH-HHHHHH--TTTTC
T ss_pred CCcEEEECC--CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhc-----CCCeEEEcCCCCH-HHHHHc--ChhhC
Confidence 457888874 788887777653 256899999984 44433333221 2378889998642 222111 14678
Q ss_pred eEEEEcCCccchHHHHHHHHhcCCCCeEEEE
Q 025824 158 DFIFVDADKDNYLNYHKRLIELVKVGGVIGY 188 (247)
Q Consensus 158 D~v~id~~~~~~~~~l~~~~~~L~~gG~lv~ 188 (247)
|.|++..+............+.+.|...+++
T Consensus 73 d~vi~~~~~d~~n~~~~~~a~~~~~~~~ii~ 103 (153)
T 1id1_A 73 RAILALSDNDADNAFVVLSAKDMSSDVKTVL 103 (153)
T ss_dssp SEEEECSSCHHHHHHHHHHHHHHTSSSCEEE
T ss_pred CEEEEecCChHHHHHHHHHHHHHCCCCEEEE
Confidence 9998876544334444455566667666665
No 379
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=93.34 E-value=0.16 Score=42.68 Aligned_cols=91 Identities=12% Similarity=0.089 Sum_probs=60.6
Q ss_pred EEEEEcc--cccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCceeE
Q 025824 82 NTMEIGV--YTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDF 159 (247)
Q Consensus 82 ~vLEiG~--g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~fD~ 159 (247)
+||-+|+ +.|..++.+++.. +++|++++.+++..+.+++ .|.. .++.....+.+..+ ..+.+|+
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~--Ga~Vi~~~~~~~~~~~~~~----lGa~---~vi~~~~~~~~~~~-----~~~~~d~ 214 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKL--GYQVAAVSGRESTHGYLKS----LGAN---RILSRDEFAESRPL-----EKQLWAG 214 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHT--TCCEEEEESCGGGHHHHHH----HTCS---EEEEGGGSSCCCSS-----CCCCEEE
T ss_pred eEEEECCCcHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHh----cCCC---EEEecCCHHHHHhh-----cCCCccE
Confidence 4999986 5677888888876 4699999999998887765 4542 12211111112222 1357998
Q ss_pred EEEcCCccchHHHHHHHHhcCCCCeEEEEec
Q 025824 160 IFVDADKDNYLNYHKRLIELVKVGGVIGYDN 190 (247)
Q Consensus 160 v~id~~~~~~~~~l~~~~~~L~~gG~lv~d~ 190 (247)
|| |+.-. ..++.+.+.|+++|.++.-.
T Consensus 215 v~-d~~g~---~~~~~~~~~l~~~G~iv~~G 241 (324)
T 3nx4_A 215 AI-DTVGD---KVLAKVLAQMNYGGCVAACG 241 (324)
T ss_dssp EE-ESSCH---HHHHHHHHTEEEEEEEEECC
T ss_pred EE-ECCCc---HHHHHHHHHHhcCCEEEEEe
Confidence 76 44322 36888899999999998643
No 380
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=93.19 E-value=0.1 Score=46.35 Aligned_cols=103 Identities=15% Similarity=0.085 Sum_probs=62.3
Q ss_pred hcCCCEEEEEcc--cccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecc--------------
Q 025824 77 LVNAKNTMEIGV--YTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPA-------------- 140 (247)
Q Consensus 77 ~~~~~~vLEiG~--g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~-------------- 140 (247)
..+..+||-+|+ +.|..++.+++.. ++++++++.+++..+.+++ .|...-+.....|.
T Consensus 226 ~~~g~~VlV~GasG~vG~~avqlak~~--Ga~vi~~~~~~~~~~~~~~----lGa~~vi~~~~~d~~~~~~~~~~~~~~~ 299 (456)
T 3krt_A 226 MKQGDNVLIWGASGGLGSYATQFALAG--GANPICVVSSPQKAEICRA----MGAEAIIDRNAEGYRFWKDENTQDPKEW 299 (456)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH----HTCCEEEETTTTTCCSEEETTEECHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHc--CCeEEEEECCHHHHHHHHh----hCCcEEEecCcCcccccccccccchHHH
Confidence 345678999996 4677778888876 5799999988887776654 45421111101111
Q ss_pred hhhhHHHHhhhcCCCceeEEEEcCCccchHHHHHHHHhcCCCCeEEEEec
Q 025824 141 LPVLDLLIQDEKNHGSFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYDN 190 (247)
Q Consensus 141 ~~~l~~l~~~~~~~~~fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv~d~ 190 (247)
.++...+.... ....+|+||-... . ..+..+.+.|++||.++.-.
T Consensus 300 ~~~~~~i~~~t-~g~g~Dvvid~~G-~---~~~~~~~~~l~~~G~iv~~G 344 (456)
T 3krt_A 300 KRFGKRIRELT-GGEDIDIVFEHPG-R---ETFGASVFVTRKGGTITTCA 344 (456)
T ss_dssp HHHHHHHHHHH-TSCCEEEEEECSC-H---HHHHHHHHHEEEEEEEEESC
T ss_pred HHHHHHHHHHh-CCCCCcEEEEcCC-c---hhHHHHHHHhhCCcEEEEEe
Confidence 00112221111 1358998864332 1 56788889999999999743
No 381
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=93.13 E-value=0.5 Score=36.00 Aligned_cols=96 Identities=14% Similarity=0.123 Sum_probs=57.3
Q ss_pred CCEEEEEcccccHHHHHHHhhCC-C-CCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhh-hcCCCc
Q 025824 80 AKNTMEIGVYTGYSLLATALALP-D-DGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQD-EKNHGS 156 (247)
Q Consensus 80 ~~~vLEiG~g~G~st~~la~~~~-~-~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~-~~~~~~ 156 (247)
..+|+-+|+ |..+..+++.+. . +.+|+++|.+++.++.++ ..| +.++.+|..+. ..+... + ...
T Consensus 39 ~~~v~IiG~--G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~----~~g----~~~~~gd~~~~-~~l~~~~~--~~~ 105 (183)
T 3c85_A 39 HAQVLILGM--GRIGTGAYDELRARYGKISLGIEIREEAAQQHR----SEG----RNVISGDATDP-DFWERILD--TGH 105 (183)
T ss_dssp TCSEEEECC--SHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHH----HTT----CCEEECCTTCH-HHHHTBCS--CCC
T ss_pred CCcEEEECC--CHHHHHHHHHHHhccCCeEEEEECCHHHHHHHH----HCC----CCEEEcCCCCH-HHHHhccC--CCC
Confidence 457888884 677777666553 2 468999999998665543 334 45677877532 112111 1 356
Q ss_pred eeEEEEcCCccchHHHHHHHHhcCCCCeEEEE
Q 025824 157 FDFIFVDADKDNYLNYHKRLIELVKVGGVIGY 188 (247)
Q Consensus 157 fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv~ 188 (247)
+|+|++-.+........-...+.+.|++.+++
T Consensus 106 ad~vi~~~~~~~~~~~~~~~~~~~~~~~~ii~ 137 (183)
T 3c85_A 106 VKLVLLAMPHHQGNQTALEQLQRRNYKGQIAA 137 (183)
T ss_dssp CCEEEECCSSHHHHHHHHHHHHHTTCCSEEEE
T ss_pred CCEEEEeCCChHHHHHHHHHHHHHCCCCEEEE
Confidence 89998865432222223334556677777775
No 382
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=93.11 E-value=0.071 Score=45.36 Aligned_cols=96 Identities=14% Similarity=0.074 Sum_probs=59.6
Q ss_pred CCCEEEEEccc-ccHHHHHHHhhCCCCC-EEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCc
Q 025824 79 NAKNTMEIGVY-TGYSLLATALALPDDG-KILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGS 156 (247)
Q Consensus 79 ~~~~vLEiG~g-~G~st~~la~~~~~~~-~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~ 156 (247)
+..+||-+|+| .|..++.+++.. +. +|++++.+++..+.+++. + + .++..+..+....+.... ...
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~--Ga~~Vi~~~~~~~~~~~~~~l---a---~--~v~~~~~~~~~~~~~~~~--~~g 231 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRAS--GAGPILVSDPNPYRLAFARPY---A---D--RLVNPLEEDLLEVVRRVT--GSG 231 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHT--TCCSEEEECSCHHHHGGGTTT---C---S--EEECTTTSCHHHHHHHHH--SSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHc--CCCEEEEECCCHHHHHHHHHh---H---H--hccCcCccCHHHHHHHhc--CCC
Confidence 66889999974 366667777775 45 899999998877766553 1 1 122111112222221111 247
Q ss_pred eeEEEEcCCccchHHHHHHHHhcCCCCeEEEEe
Q 025824 157 FDFIFVDADKDNYLNYHKRLIELVKVGGVIGYD 189 (247)
Q Consensus 157 fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv~d 189 (247)
+|+||-... ....++.+.+.|+++|.++.-
T Consensus 232 ~D~vid~~g---~~~~~~~~~~~l~~~G~iv~~ 261 (343)
T 2dq4_A 232 VEVLLEFSG---NEAAIHQGLMALIPGGEARIL 261 (343)
T ss_dssp EEEEEECSC---CHHHHHHHHHHEEEEEEEEEC
T ss_pred CCEEEECCC---CHHHHHHHHHHHhcCCEEEEE
Confidence 998874433 245577888999999999864
No 383
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=93.08 E-value=0.21 Score=44.13 Aligned_cols=102 Identities=12% Similarity=0.053 Sum_probs=62.1
Q ss_pred hcCCCEEEEEcc--cccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecch-------------
Q 025824 77 LVNAKNTMEIGV--YTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPAL------------- 141 (247)
Q Consensus 77 ~~~~~~vLEiG~--g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~------------- 141 (247)
..+.++||-+|+ |.|..++.+++.. ++++++++.+++..+.++ +.|...-+.....+..
T Consensus 218 ~~~g~~VlV~GasG~iG~~a~qla~~~--Ga~vi~~~~~~~~~~~~~----~lGa~~~i~~~~~~~~~~~~~~~~~~~~~ 291 (447)
T 4a0s_A 218 MKQGDIVLIWGASGGLGSYAIQFVKNG--GGIPVAVVSSAQKEAAVR----ALGCDLVINRAELGITDDIADDPRRVVET 291 (447)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHH----HTTCCCEEEHHHHTCCTTGGGCHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHH----hcCCCEEEecccccccccccccccccchh
Confidence 345688999996 4567777788775 579999999888776664 4565321111111110
Q ss_pred --hhhHHHHhhhcCCCceeEEEEcCCccchHHHHHHHHhcCCCCeEEEEec
Q 025824 142 --PVLDLLIQDEKNHGSFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYDN 190 (247)
Q Consensus 142 --~~l~~l~~~~~~~~~fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv~d~ 190 (247)
.....+.... ...+|+||-.... ..++.+.+.|++||.++.-.
T Consensus 292 ~~~~~~~v~~~~--g~g~Dvvid~~G~----~~~~~~~~~l~~~G~iv~~G 336 (447)
T 4a0s_A 292 GRKLAKLVVEKA--GREPDIVFEHTGR----VTFGLSVIVARRGGTVVTCG 336 (447)
T ss_dssp HHHHHHHHHHHH--SSCCSEEEECSCH----HHHHHHHHHSCTTCEEEESC
T ss_pred hhHHHHHHHHHh--CCCceEEEECCCc----hHHHHHHHHHhcCCEEEEEe
Confidence 0011111111 3579988754432 35778889999999998743
No 384
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=93.04 E-value=0.26 Score=42.72 Aligned_cols=95 Identities=11% Similarity=-0.028 Sum_probs=66.3
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCC-cEEEEEecchhhhHHHHhhhcCCCce
Q 025824 79 NAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAH-KIDFREGPALPVLDLLIQDEKNHGSF 157 (247)
Q Consensus 79 ~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~-~i~~~~gd~~~~l~~l~~~~~~~~~f 157 (247)
...+||.++...|..+.+++.. .++.+.-+--.....+.|+..+++.. .+++. +..+.+ ...|
T Consensus 38 ~~~~~~~~~d~~gal~~~~~~~-----~~~~~~ds~~~~~~~~~n~~~~~~~~~~~~~~--~~~~~~---------~~~~ 101 (375)
T 4dcm_A 38 IRGPVLILNDAFGALSCALAEH-----KPYSIGDSYISELATRENLRLNGIDESSVKFL--DSTADY---------PQQP 101 (375)
T ss_dssp CCSCEEEECCSSSHHHHHTGGG-----CCEEEESCHHHHHHHHHHHHHTTCCGGGSEEE--ETTSCC---------CSSC
T ss_pred CCCCEEEECCCCCHHHHhhccC-----CceEEEhHHHHHHHHHHHHHHcCCCccceEec--cccccc---------ccCC
Confidence 3457999999999999988743 34555333333456788999988864 36654 222221 4689
Q ss_pred eEEEEcCCc--cchHHHHHHHHhcCCCCeEEEEe
Q 025824 158 DFIFVDADK--DNYLNYHKRLIELVKVGGVIGYD 189 (247)
Q Consensus 158 D~v~id~~~--~~~~~~l~~~~~~L~~gG~lv~d 189 (247)
|+|++..++ ......+..+...|++|+.|++.
T Consensus 102 ~~v~~~lpk~~~~l~~~L~~l~~~l~~~~~i~~~ 135 (375)
T 4dcm_A 102 GVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAG 135 (375)
T ss_dssp SEEEEECCSCHHHHHHHHHHHHTTCCTTSEEEEE
T ss_pred CEEEEEcCCCHHHHHHHHHHHHhhCCCCCEEEEE
Confidence 999988774 44556778888999999998763
No 385
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=92.97 E-value=1.2 Score=31.81 Aligned_cols=95 Identities=14% Similarity=0.124 Sum_probs=56.3
Q ss_pred CEEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCceeE
Q 025824 81 KNTMEIGVYTGYSLLATALALP-DDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDF 159 (247)
Q Consensus 81 ~~vLEiG~g~G~st~~la~~~~-~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~fD~ 159 (247)
.+|+-+|+ |..+..++..+. .+.+|+.+|.+++.++..++ ..+ +.++.+|..+. ..+... ....+|+
T Consensus 5 m~i~IiG~--G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~---~~~----~~~~~~d~~~~-~~l~~~--~~~~~d~ 72 (140)
T 1lss_A 5 MYIIIAGI--GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASA---EID----ALVINGDCTKI-KTLEDA--GIEDADM 72 (140)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH---HCS----SEEEESCTTSH-HHHHHT--TTTTCSE
T ss_pred CEEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH---hcC----cEEEEcCCCCH-HHHHHc--CcccCCE
Confidence 57888875 777777766553 25689999999876544332 223 45667776432 122111 1357899
Q ss_pred EEEcCCccchHHHHHHHHhcCCCCeEEE
Q 025824 160 IFVDADKDNYLNYHKRLIELVKVGGVIG 187 (247)
Q Consensus 160 v~id~~~~~~~~~l~~~~~~L~~gG~lv 187 (247)
|++-.+.......+..+.+.+.++-+++
T Consensus 73 vi~~~~~~~~~~~~~~~~~~~~~~~ii~ 100 (140)
T 1lss_A 73 YIAVTGKEEVNLMSSLLAKSYGINKTIA 100 (140)
T ss_dssp EEECCSCHHHHHHHHHHHHHTTCCCEEE
T ss_pred EEEeeCCchHHHHHHHHHHHcCCCEEEE
Confidence 9987654333334445556677765554
No 386
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=92.93 E-value=0.46 Score=35.23 Aligned_cols=99 Identities=12% Similarity=-0.030 Sum_probs=57.8
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCc
Q 025824 78 VNAKNTMEIGVYTGYSLLATALALP-DDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGS 156 (247)
Q Consensus 78 ~~~~~vLEiG~g~G~st~~la~~~~-~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~ 156 (247)
....+|+-+|+ |..+..++..+. .+.+|+.+|.+++.++.+++ .. .+.++.+|..+. ..+...+ ...
T Consensus 17 ~~~~~v~IiG~--G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~---~~----g~~~~~~d~~~~-~~l~~~~--~~~ 84 (155)
T 2g1u_A 17 QKSKYIVIFGC--GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNS---EF----SGFTVVGDAAEF-ETLKECG--MEK 84 (155)
T ss_dssp CCCCEEEEECC--SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT---TC----CSEEEESCTTSH-HHHHTTT--GGG
T ss_pred cCCCcEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh---cC----CCcEEEecCCCH-HHHHHcC--ccc
Confidence 35678999985 666666665542 25689999999886544321 12 245666776432 2221110 246
Q ss_pred eeEEEEcCCccchHHHHHHHHhcCCCCeEEEE
Q 025824 157 FDFIFVDADKDNYLNYHKRLIELVKVGGVIGY 188 (247)
Q Consensus 157 fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv~ 188 (247)
+|+||+-.........+..+.+.+.+...++.
T Consensus 85 ad~Vi~~~~~~~~~~~~~~~~~~~~~~~~iv~ 116 (155)
T 2g1u_A 85 ADMVFAFTNDDSTNFFISMNARYMFNVENVIA 116 (155)
T ss_dssp CSEEEECSSCHHHHHHHHHHHHHTSCCSEEEE
T ss_pred CCEEEEEeCCcHHHHHHHHHHHHHCCCCeEEE
Confidence 89998876544444444445555566666664
No 387
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=92.91 E-value=0.29 Score=41.77 Aligned_cols=102 Identities=10% Similarity=0.052 Sum_probs=58.7
Q ss_pred cCC-CEEEEEcc--cccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEe------cchhhhHHHH
Q 025824 78 VNA-KNTMEIGV--YTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREG------PALPVLDLLI 148 (247)
Q Consensus 78 ~~~-~~vLEiG~--g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~g------d~~~~l~~l~ 148 (247)
.+. .+||-+|+ +.|..++.+|+.. +++++++..+++.....++.++..|.. .++.. +..+.+.++.
T Consensus 165 ~~g~~~VlV~Ga~G~vG~~aiqlak~~--Ga~vi~~~~~~~~~~~~~~~~~~lGa~---~vi~~~~~~~~~~~~~i~~~t 239 (364)
T 1gu7_A 165 TPGKDWFIQNGGTSAVGKYASQIGKLL--NFNSISVIRDRPNLDEVVASLKELGAT---QVITEDQNNSREFGPTIKEWI 239 (364)
T ss_dssp CTTTCEEEESCTTSHHHHHHHHHHHHH--TCEEEEEECCCTTHHHHHHHHHHHTCS---EEEEHHHHHCGGGHHHHHHHH
T ss_pred CCCCcEEEECCCCcHHHHHHHHHHHHC--CCEEEEEecCccccHHHHHHHHhcCCe---EEEecCccchHHHHHHHHHHh
Confidence 345 88999985 4666777888875 578888876665432233444556753 22221 2222222221
Q ss_pred hhhcCCCceeEEEEcCCccchHHHHHHHHhcCCCCeEEEEec
Q 025824 149 QDEKNHGSFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYDN 190 (247)
Q Consensus 149 ~~~~~~~~fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv~d~ 190 (247)
..+ ...+|+||-.... .... .+.+.|+++|.++.-.
T Consensus 240 ~~~--~~g~Dvvid~~G~---~~~~-~~~~~l~~~G~~v~~g 275 (364)
T 1gu7_A 240 KQS--GGEAKLALNCVGG---KSST-GIARKLNNNGLMLTYG 275 (364)
T ss_dssp HHH--TCCEEEEEESSCH---HHHH-HHHHTSCTTCEEEECC
T ss_pred hcc--CCCceEEEECCCc---hhHH-HHHHHhccCCEEEEec
Confidence 001 2479988743321 2233 6679999999998643
No 388
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=92.81 E-value=0.15 Score=43.20 Aligned_cols=68 Identities=6% Similarity=-0.033 Sum_probs=48.6
Q ss_pred HHHHHHh--hcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchh
Q 025824 70 FLNMLLK--LVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALP 142 (247)
Q Consensus 70 ~l~~l~~--~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~ 142 (247)
++..++. ..+...|||.-||+|..+...... +-+.+++|+++..++.+++.+..++.. ...+.+|+.+
T Consensus 241 l~~~~i~~~~~~~~~VlDpF~GsGtt~~aa~~~---gr~~ig~e~~~~~~~~~~~r~~~~~~~--~~~~~~~~~~ 310 (323)
T 1boo_A 241 LPEFFIRMLTEPDDLVVDIFGGSNTTGLVAERE---SRKWISFEMKPEYVAASAFRFLDNNIS--EEKITDIYNR 310 (323)
T ss_dssp HHHHHHHHHCCTTCEEEETTCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHGGGSCSCSC--HHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCEEEECCCCCCHHHHHHHHc---CCCEEEEeCCHHHHHHHHHHHHhcccc--hHHHHHHHHH
Confidence 4444443 245678999999999887765543 469999999999999999998876642 3344444443
No 389
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=92.73 E-value=0.22 Score=42.12 Aligned_cols=76 Identities=13% Similarity=0.145 Sum_probs=49.4
Q ss_pred HHHHHHHHhh--cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCc---chHHHHHHHHHHcCCCC---cEEEEEec
Q 025824 68 GQFLNMLLKL--VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINR---ENYELGLPVIQKAGVAH---KIDFREGP 139 (247)
Q Consensus 68 ~~~l~~l~~~--~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~---~~~~~a~~~~~~~g~~~---~i~~~~gd 139 (247)
..++..++.. .+...|||.-||+|..+...... +-+.+++|+++ +.++.+++.+..++.-+ +.+ +...
T Consensus 229 ~~l~~~~i~~~~~~~~~vlDpF~GsGtt~~aa~~~---~r~~ig~e~~~~~~~~~~~~~~Rl~~~~~~~~~~~~~-~~~~ 304 (319)
T 1eg2_A 229 AAVIERLVRALSHPGSTVLDFFAGSGVTARVAIQE---GRNSICTDAAPVFKEYYQKQLTFLQDDGLIDKARSYE-IVEG 304 (319)
T ss_dssp HHHHHHHHHHHSCTTCEEEETTCTTCHHHHHHHHH---TCEEEEEESSTHHHHHHHHHHHHC---------CCEE-EEEC
T ss_pred HHHHHHHHHHhCCCCCEEEecCCCCCHHHHHHHHc---CCcEEEEECCccHHHHHHHHHHHHHHccCCcccceee-ecch
Confidence 4455555443 45678999999999888776654 46999999999 99999999998776321 223 2344
Q ss_pred chhhhHHH
Q 025824 140 ALPVLDLL 147 (247)
Q Consensus 140 ~~~~l~~l 147 (247)
..+++..+
T Consensus 305 ~~~~~~~~ 312 (319)
T 1eg2_A 305 AANFGAAL 312 (319)
T ss_dssp GGGTHHHH
T ss_pred HHHHHHHH
Confidence 45555554
No 390
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=92.70 E-value=0.59 Score=40.03 Aligned_cols=94 Identities=18% Similarity=0.140 Sum_probs=57.5
Q ss_pred CCCEEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCce
Q 025824 79 NAKNTMEIGVYT-GYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSF 157 (247)
Q Consensus 79 ~~~~vLEiG~g~-G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~f 157 (247)
+..+||-+|+|. |..++.+++.. +.+|++++.+++..+.+++ ..|.. .++..+-.+.+..+ .+.+
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~~--Ga~Vi~~~~~~~~~~~~~~---~lGa~---~v~~~~~~~~~~~~------~~~~ 252 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKAF--GSKVTVISTSPSKKEEALK---NFGAD---SFLVSRDQEQMQAA------AGTL 252 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCGGGHHHHHH---TSCCS---EEEETTCHHHHHHT------TTCE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH---hcCCc---eEEeccCHHHHHHh------hCCC
Confidence 567899999652 55566677765 4799999999987665542 34542 22222212233332 2479
Q ss_pred eEEEEcCCccchHHHHHHHHhcCCCCeEEEEe
Q 025824 158 DFIFVDADKDNYLNYHKRLIELVKVGGVIGYD 189 (247)
Q Consensus 158 D~v~id~~~~~~~~~l~~~~~~L~~gG~lv~d 189 (247)
|+||-...... .++.+.+.|+++|.++.-
T Consensus 253 D~vid~~g~~~---~~~~~~~~l~~~G~iv~~ 281 (366)
T 1yqd_A 253 DGIIDTVSAVH---PLLPLFGLLKSHGKLILV 281 (366)
T ss_dssp EEEEECCSSCC---CSHHHHHHEEEEEEEEEC
T ss_pred CEEEECCCcHH---HHHHHHHHHhcCCEEEEE
Confidence 99875443221 234566788999998864
No 391
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=92.65 E-value=0.73 Score=38.86 Aligned_cols=95 Identities=16% Similarity=0.042 Sum_probs=61.9
Q ss_pred CCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCceeE
Q 025824 80 AKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDF 159 (247)
Q Consensus 80 ~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~fD~ 159 (247)
.++|+-+|+ |..+..+++.+...+.++.+|.+++.++ +++ . .+.++.||+.+. ..+... .-+..|.
T Consensus 115 ~~~viI~G~--G~~g~~l~~~L~~~g~v~vid~~~~~~~-~~~----~----~~~~i~gd~~~~-~~L~~a--~i~~a~~ 180 (336)
T 1lnq_A 115 SRHVVICGW--SESTLECLRELRGSEVFVLAEDENVRKK-VLR----S----GANFVHGDPTRV-SDLEKA--NVRGARA 180 (336)
T ss_dssp -CEEEEESC--CHHHHHHHTTGGGSCEEEEESCGGGHHH-HHH----T----TCEEEESCTTSH-HHHHHT--CSTTEEE
T ss_pred cCCEEEECC--cHHHHHHHHHHHhCCcEEEEeCChhhhh-HHh----C----CcEEEEeCCCCH-HHHHhc--ChhhccE
Confidence 357888884 8888888888753334999999998776 432 2 468999998653 222222 2468999
Q ss_pred EEEcCCccchHHHHHHHHhcCCCCeEEEE
Q 025824 160 IFVDADKDNYLNYHKRLIELVKVGGVIGY 188 (247)
Q Consensus 160 v~id~~~~~~~~~l~~~~~~L~~gG~lv~ 188 (247)
|++-.+.....-..-...+.+.|...+++
T Consensus 181 vi~~~~~d~~n~~~~~~ar~~~~~~~iia 209 (336)
T 1lnq_A 181 VIVDLESDSETIHCILGIRKIDESVRIIA 209 (336)
T ss_dssp EEECCSSHHHHHHHHHHHHTTCTTSEEEE
T ss_pred EEEcCCccHHHHHHHHHHHHHCCCCeEEE
Confidence 98866533333333444577788766654
No 392
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=92.54 E-value=0.49 Score=39.86 Aligned_cols=89 Identities=20% Similarity=0.239 Sum_probs=57.8
Q ss_pred CCEEEEEcccccHHHHHHHhhCCC-CC--EEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchh-hhHHHHhhhcCCC
Q 025824 80 AKNTMEIGVYTGYSLLATALALPD-DG--KILAMDINRENYELGLPVIQKAGVAHKIDFREGPALP-VLDLLIQDEKNHG 155 (247)
Q Consensus 80 ~~~vLEiG~g~G~st~~la~~~~~-~~--~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~-~l~~l~~~~~~~~ 155 (247)
.++|.=||+ |..+..++..+.. +. +|+++|.+++.++.+. ..|..+ -...+..+ . -.
T Consensus 33 ~~kI~IIG~--G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~----~~G~~~---~~~~~~~~~~----------~~ 93 (314)
T 3ggo_A 33 MQNVLIVGV--GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAV----DLGIID---EGTTSIAKVE----------DF 93 (314)
T ss_dssp CSEEEEESC--SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHH----HTTSCS---EEESCTTGGG----------GG
T ss_pred CCEEEEEee--CHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHH----HCCCcc---hhcCCHHHHh----------hc
Confidence 368999985 4555444444321 33 8999999998766554 345422 12233322 2 14
Q ss_pred ceeEEEEcCCccchHHHHHHHHhcCCCCeEEE
Q 025824 156 SFDFIFVDADKDNYLNYHKRLIELVKVGGVIG 187 (247)
Q Consensus 156 ~fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv 187 (247)
..|+||+..+.......++.+.+.+++|.+|+
T Consensus 94 ~aDvVilavp~~~~~~vl~~l~~~l~~~~iv~ 125 (314)
T 3ggo_A 94 SPDFVMLSSPVRTFREIAKKLSYILSEDATVT 125 (314)
T ss_dssp CCSEEEECSCGGGHHHHHHHHHHHSCTTCEEE
T ss_pred cCCEEEEeCCHHHHHHHHHHHhhccCCCcEEE
Confidence 67999998887777788888888999987664
No 393
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=92.37 E-value=0.4 Score=41.17 Aligned_cols=97 Identities=15% Similarity=0.159 Sum_probs=55.5
Q ss_pred cCCCEEEEEccc-ccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCc
Q 025824 78 VNAKNTMEIGVY-TGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGS 156 (247)
Q Consensus 78 ~~~~~vLEiG~g-~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~ 156 (247)
.++++|+-+|+| .|..+..++..+ +++|+.+|.+++.++.+++.... .+.....+..+....+ ..
T Consensus 165 l~~~~VlViGaGgvG~~aa~~a~~~--Ga~V~v~dr~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~~-------~~ 230 (361)
T 1pjc_A 165 VKPGKVVILGGGVVGTEAAKMAVGL--GAQVQIFDINVERLSYLETLFGS-----RVELLYSNSAEIETAV-------AE 230 (361)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHGG-----GSEEEECCHHHHHHHH-------HT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHhhCc-----eeEeeeCCHHHHHHHH-------cC
Confidence 356899999974 233344455554 45999999999887777655422 2333322222221222 36
Q ss_pred eeEEEEcCCccc--hHH-HHHHHHhcCCCCeEEEE
Q 025824 157 FDFIFVDADKDN--YLN-YHKRLIELVKVGGVIGY 188 (247)
Q Consensus 157 fD~v~id~~~~~--~~~-~l~~~~~~L~~gG~lv~ 188 (247)
+|+|+....... .+. ..+...+.++|||+++-
T Consensus 231 ~DvVI~~~~~~~~~~~~li~~~~~~~~~~g~~ivd 265 (361)
T 1pjc_A 231 ADLLIGAVLVPGRRAPILVPASLVEQMRTGSVIVD 265 (361)
T ss_dssp CSEEEECCCCTTSSCCCCBCHHHHTTSCTTCEEEE
T ss_pred CCEEEECCCcCCCCCCeecCHHHHhhCCCCCEEEE
Confidence 899875433211 011 13456678999998764
No 394
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=92.15 E-value=1.3 Score=37.25 Aligned_cols=90 Identities=13% Similarity=0.025 Sum_probs=56.7
Q ss_pred CCEEEEEcccccHHHHHHHhhCCC-C-CEEEEEeCCcc---hHHHHHHHHHHcCCCCcEEEEEe-cchhhhHHHHhhhcC
Q 025824 80 AKNTMEIGVYTGYSLLATALALPD-D-GKILAMDINRE---NYELGLPVIQKAGVAHKIDFREG-PALPVLDLLIQDEKN 153 (247)
Q Consensus 80 ~~~vLEiG~g~G~st~~la~~~~~-~-~~v~~iD~~~~---~~~~a~~~~~~~g~~~~i~~~~g-d~~~~l~~l~~~~~~ 153 (247)
..+|.-||+ |..+..++..+.. + .+|+++|.+++ ..+...+.+...|. .. +..+.+
T Consensus 24 ~m~IgvIG~--G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~~g~-------~~~s~~e~~--------- 85 (317)
T 4ezb_A 24 MTTIAFIGF--GEAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAELGV-------EPLDDVAGI--------- 85 (317)
T ss_dssp CCEEEEECC--SHHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHHTTC-------EEESSGGGG---------
T ss_pred CCeEEEECc--cHHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHHCCC-------CCCCHHHHH---------
Confidence 357888884 6666666655432 4 58999999973 22222233334443 23 333332
Q ss_pred CCceeEEEEcCCccchHHHHHHHHhcCCCCeEEEE
Q 025824 154 HGSFDFIFVDADKDNYLNYHKRLIELVKVGGVIGY 188 (247)
Q Consensus 154 ~~~fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv~ 188 (247)
...|+||+-.+.......++.+.+.+++|.+++-
T Consensus 86 -~~aDvVi~avp~~~~~~~~~~i~~~l~~~~ivv~ 119 (317)
T 4ezb_A 86 -ACADVVLSLVVGAATKAVAASAAPHLSDEAVFID 119 (317)
T ss_dssp -GGCSEEEECCCGGGHHHHHHHHGGGCCTTCEEEE
T ss_pred -hcCCEEEEecCCHHHHHHHHHHHhhcCCCCEEEE
Confidence 3569999887766666677888888998887763
No 395
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=92.05 E-value=0.11 Score=43.76 Aligned_cols=91 Identities=13% Similarity=0.095 Sum_probs=58.7
Q ss_pred EEEEEcc--cccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEe-cc-hhhhHHHHhhhcCCCce
Q 025824 82 NTMEIGV--YTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREG-PA-LPVLDLLIQDEKNHGSF 157 (247)
Q Consensus 82 ~vLEiG~--g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~g-d~-~~~l~~l~~~~~~~~~f 157 (247)
+||-+|+ +.|..++.+++.. +.+|++++.+++..+.+++ .|.. .++.. +. .+.+..+ ....+
T Consensus 153 ~VlV~Ga~G~vG~~~~q~a~~~--Ga~vi~~~~~~~~~~~~~~----lGa~---~v~~~~~~~~~~~~~~-----~~~~~ 218 (330)
T 1tt7_A 153 SVLVTGATGGVGGIAVSMLNKR--GYDVVASTGNREAADYLKQ----LGAS---EVISREDVYDGTLKAL-----SKQQW 218 (330)
T ss_dssp CEEEESTTSHHHHHHHHHHHHH--TCCEEEEESSSSTHHHHHH----HTCS---EEEEHHHHCSSCCCSS-----CCCCE
T ss_pred eEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH----cCCc---EEEECCCchHHHHHHh-----hcCCc
Confidence 7999996 5677777888775 4689999999988777654 4542 12211 10 1111111 12469
Q ss_pred eEEEEcCCccchHHHHHHHHhcCCCCeEEEEec
Q 025824 158 DFIFVDADKDNYLNYHKRLIELVKVGGVIGYDN 190 (247)
Q Consensus 158 D~v~id~~~~~~~~~l~~~~~~L~~gG~lv~d~ 190 (247)
|+||-.... ..+..+.+.|+++|.++.-.
T Consensus 219 d~vid~~g~----~~~~~~~~~l~~~G~iv~~G 247 (330)
T 1tt7_A 219 QGAVDPVGG----KQLASLLSKIQYGGSVAVSG 247 (330)
T ss_dssp EEEEESCCT----HHHHHHHTTEEEEEEEEECC
T ss_pred cEEEECCcH----HHHHHHHHhhcCCCEEEEEe
Confidence 988643332 35788889999999998643
No 396
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=92.01 E-value=0.34 Score=42.52 Aligned_cols=96 Identities=16% Similarity=0.044 Sum_probs=62.6
Q ss_pred CCEEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCcee
Q 025824 80 AKNTMEIGVYTGYSLLATALALP-DDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFD 158 (247)
Q Consensus 80 ~~~vLEiG~g~G~st~~la~~~~-~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~fD 158 (247)
..+|+-+|+ |..+..+++.+. .+..|+.||.+++.++.+++ .| +.++.||+.+. ..|...+ -...|
T Consensus 4 ~~~viIiG~--Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~----~g----~~vi~GDat~~-~~L~~ag--i~~A~ 70 (413)
T 3l9w_A 4 GMRVIIAGF--GRFGQITGRLLLSSGVKMVVLDHDPDHIETLRK----FG----MKVFYGDATRM-DLLESAG--AAKAE 70 (413)
T ss_dssp CCSEEEECC--SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHH----TT----CCCEESCTTCH-HHHHHTT--TTTCS
T ss_pred CCeEEEECC--CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHh----CC----CeEEEcCCCCH-HHHHhcC--CCccC
Confidence 356888885 666666666553 35789999999998776653 34 46788998653 2222222 46789
Q ss_pred EEEEcCCccchHHHHHHHHhcCCCCeEEEE
Q 025824 159 FIFVDADKDNYLNYHKRLIELVKVGGVIGY 188 (247)
Q Consensus 159 ~v~id~~~~~~~~~l~~~~~~L~~gG~lv~ 188 (247)
+|++..+.......+-...+.+.|+..|++
T Consensus 71 ~viv~~~~~~~n~~i~~~ar~~~p~~~Iia 100 (413)
T 3l9w_A 71 VLINAIDDPQTNLQLTEMVKEHFPHLQIIA 100 (413)
T ss_dssp EEEECCSSHHHHHHHHHHHHHHCTTCEEEE
T ss_pred EEEECCCChHHHHHHHHHHHHhCCCCeEEE
Confidence 998876644434444555577788866664
No 397
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=91.99 E-value=1.1 Score=30.76 Aligned_cols=81 Identities=16% Similarity=0.004 Sum_probs=50.5
Q ss_pred CCEEEEEcccccHHHHHHHhhCC-CC-CEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhh--hHHHHhhhcCCC
Q 025824 80 AKNTMEIGVYTGYSLLATALALP-DD-GKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPV--LDLLIQDEKNHG 155 (247)
Q Consensus 80 ~~~vLEiG~g~G~st~~la~~~~-~~-~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~--l~~l~~~~~~~~ 155 (247)
.++|+-+|+ |..+..++..+. .+ .+|+.+|.+++..+... . ..+.++..|..+. +... -.
T Consensus 5 ~~~v~I~G~--G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~----~----~~~~~~~~d~~~~~~~~~~------~~ 68 (118)
T 3ic5_A 5 RWNICVVGA--GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN----R----MGVATKQVDAKDEAGLAKA------LG 68 (118)
T ss_dssp CEEEEEECC--SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH----T----TTCEEEECCTTCHHHHHHH------TT
T ss_pred cCeEEEECC--CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH----h----CCCcEEEecCCCHHHHHHH------Hc
Confidence 357999997 777776665542 24 68999999987655443 2 2456777776542 2332 25
Q ss_pred ceeEEEEcCCccchHHHHHHH
Q 025824 156 SFDFIFVDADKDNYLNYHKRL 176 (247)
Q Consensus 156 ~fD~v~id~~~~~~~~~l~~~ 176 (247)
.+|+||...+........+.+
T Consensus 69 ~~d~vi~~~~~~~~~~~~~~~ 89 (118)
T 3ic5_A 69 GFDAVISAAPFFLTPIIAKAA 89 (118)
T ss_dssp TCSEEEECSCGGGHHHHHHHH
T ss_pred CCCEEEECCCchhhHHHHHHH
Confidence 789998877644434444443
No 398
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=91.94 E-value=0.14 Score=43.57 Aligned_cols=97 Identities=9% Similarity=0.027 Sum_probs=54.6
Q ss_pred hcCCCEEEEEcc--cccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCC
Q 025824 77 LVNAKNTMEIGV--YTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNH 154 (247)
Q Consensus 77 ~~~~~~vLEiG~--g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~ 154 (247)
..+..+||-+|+ +.|..++.+++... +.+|++++ +++..+.++ .|.. .++. ...+....+... ..
T Consensus 140 ~~~g~~VlV~Ga~G~vG~~a~qla~~~g-~~~V~~~~-~~~~~~~~~-----~ga~---~~~~-~~~~~~~~~~~~--~~ 206 (349)
T 4a27_A 140 LREGMSVLVHSAGGGVGQAVAQLCSTVP-NVTVFGTA-STFKHEAIK-----DSVT---HLFD-RNADYVQEVKRI--SA 206 (349)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHTTST-TCEEEEEE-CGGGHHHHG-----GGSS---EEEE-TTSCHHHHHHHH--CT
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHcC-CcEEEEeC-CHHHHHHHH-----cCCc---EEEc-CCccHHHHHHHh--cC
Confidence 345689999997 35667777777664 57899988 555444432 4542 2222 222232322211 13
Q ss_pred CceeEEEEcCCccchHHHHHHHHhcCCCCeEEEEec
Q 025824 155 GSFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYDN 190 (247)
Q Consensus 155 ~~fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv~d~ 190 (247)
+.+|+||-.... ..+..+.+.|+++|.++.-.
T Consensus 207 ~g~Dvv~d~~g~----~~~~~~~~~l~~~G~~v~~G 238 (349)
T 4a27_A 207 EGVDIVLDCLCG----DNTGKGLSLLKPLGTYILYG 238 (349)
T ss_dssp TCEEEEEEECC-----------CTTEEEEEEEEEEC
T ss_pred CCceEEEECCCc----hhHHHHHHHhhcCCEEEEEC
Confidence 579988743322 12367889999999998643
No 399
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=91.94 E-value=2 Score=29.91 Aligned_cols=77 Identities=16% Similarity=0.062 Sum_probs=51.4
Q ss_pred CCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCceeEEEEcCC--ccchHHHHHHHHhcCC
Q 025824 104 DGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDFIFVDAD--KDNYLNYHKRLIELVK 181 (247)
Q Consensus 104 ~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~fD~v~id~~--~~~~~~~l~~~~~~L~ 181 (247)
+.+|..+|-++......++.+...|. .+. ...+..+.+..+. ..++|+|++|.. ..+-.+.++.+.+.-.
T Consensus 7 ~~~ilivdd~~~~~~~l~~~L~~~g~--~v~-~~~~~~~a~~~l~-----~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~ 78 (130)
T 3eod_A 7 GKQILIVEDEQVFRSLLDSWFSSLGA--TTV-LAADGVDALELLG-----GFTPDLMICDIAMPRMNGLKLLEHIRNRGD 78 (130)
T ss_dssp TCEEEEECSCHHHHHHHHHHHHHTTC--EEE-EESCHHHHHHHHT-----TCCCSEEEECCC-----CHHHHHHHHHTTC
T ss_pred CCeEEEEeCCHHHHHHHHHHHHhCCc--eEE-EeCCHHHHHHHHh-----cCCCCEEEEecCCCCCCHHHHHHHHHhcCC
Confidence 56899999999999999999998875 233 3556666666552 567999999976 2234566666665433
Q ss_pred CCeEEEE
Q 025824 182 VGGVIGY 188 (247)
Q Consensus 182 ~gG~lv~ 188 (247)
.--+|++
T Consensus 79 ~~~ii~~ 85 (130)
T 3eod_A 79 QTPVLVI 85 (130)
T ss_dssp CCCEEEE
T ss_pred CCCEEEE
Confidence 3334444
No 400
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=91.88 E-value=0.45 Score=40.60 Aligned_cols=95 Identities=15% Similarity=0.180 Sum_probs=58.4
Q ss_pred CCCEEEEEccc-ccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCce
Q 025824 79 NAKNTMEIGVY-TGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSF 157 (247)
Q Consensus 79 ~~~~vLEiG~g-~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~f 157 (247)
+..+||-+|+| .|..++.+++.. +++|++++.+++..+.+++ ..|... ++..+-.+.+..+ .+.+
T Consensus 180 ~g~~VlV~GaG~vG~~a~qlak~~--Ga~Vi~~~~~~~~~~~~~~---~lGa~~---vi~~~~~~~~~~~------~~g~ 245 (357)
T 2cf5_A 180 PGLRGGILGLGGVGHMGVKIAKAM--GHHVTVISSSNKKREEALQ---DLGADD---YVIGSDQAKMSEL------ADSL 245 (357)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHH--TCEEEEEESSTTHHHHHHT---TSCCSC---EEETTCHHHHHHS------TTTE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC--CCeEEEEeCChHHHHHHHH---HcCCce---eeccccHHHHHHh------cCCC
Confidence 66799999965 355566677765 4699999999886655542 456432 2222212223222 3479
Q ss_pred eEEEEcCCccchHHHHHHHHhcCCCCeEEEEec
Q 025824 158 DFIFVDADKDNYLNYHKRLIELVKVGGVIGYDN 190 (247)
Q Consensus 158 D~v~id~~~~~~~~~l~~~~~~L~~gG~lv~d~ 190 (247)
|+||-..... ..++.+.+.|+++|.++.-.
T Consensus 246 D~vid~~g~~---~~~~~~~~~l~~~G~iv~~G 275 (357)
T 2cf5_A 246 DYVIDTVPVH---HALEPYLSLLKLDGKLILMG 275 (357)
T ss_dssp EEEEECCCSC---CCSHHHHTTEEEEEEEEECS
T ss_pred CEEEECCCCh---HHHHHHHHHhccCCEEEEeC
Confidence 9887433322 12456678999999998643
No 401
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=91.79 E-value=0.26 Score=41.26 Aligned_cols=87 Identities=15% Similarity=0.092 Sum_probs=56.4
Q ss_pred cCCCEEEEEccc-ccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCc
Q 025824 78 VNAKNTMEIGVY-TGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGS 156 (247)
Q Consensus 78 ~~~~~vLEiG~g-~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~ 156 (247)
.+..+||-+|+| .|..++.+++.. +++|++++ +++..+.+++ .|.. .++ .| ...+ ...
T Consensus 141 ~~g~~VlV~GaG~vG~~a~qlak~~--Ga~Vi~~~-~~~~~~~~~~----lGa~---~v~-~d----~~~v------~~g 199 (315)
T 3goh_A 141 TKQREVLIVGFGAVNNLLTQMLNNA--GYVVDLVS-ASLSQALAAK----RGVR---HLY-RE----PSQV------TQK 199 (315)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHH--TCEEEEEC-SSCCHHHHHH----HTEE---EEE-SS----GGGC------CSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHc--CCEEEEEE-ChhhHHHHHH----cCCC---EEE-cC----HHHh------CCC
Confidence 456899999985 366777888876 46999999 8888877755 4541 222 23 2222 368
Q ss_pred eeEEEEcCCccchHHHHHHHHhcCCCCeEEEEe
Q 025824 157 FDFIFVDADKDNYLNYHKRLIELVKVGGVIGYD 189 (247)
Q Consensus 157 fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv~d 189 (247)
+|+|| |+.-. ..+..+.+.|+++|.++.-
T Consensus 200 ~Dvv~-d~~g~---~~~~~~~~~l~~~G~~v~~ 228 (315)
T 3goh_A 200 YFAIF-DAVNS---QNAAALVPSLKANGHIICI 228 (315)
T ss_dssp EEEEE-CC----------TTGGGEEEEEEEEEE
T ss_pred ccEEE-ECCCc---hhHHHHHHHhcCCCEEEEE
Confidence 99886 44321 1235677899999998864
No 402
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=91.76 E-value=4.2 Score=32.58 Aligned_cols=109 Identities=11% Similarity=0.013 Sum_probs=64.6
Q ss_pred CCCEEEEEccccc-HHHHHHHhhC-CCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhh--hHHHHhhh-cC
Q 025824 79 NAKNTMEIGVYTG-YSLLATALAL-PDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPV--LDLLIQDE-KN 153 (247)
Q Consensus 79 ~~~~vLEiG~g~G-~st~~la~~~-~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~--l~~l~~~~-~~ 153 (247)
+.+++|-.|++.| ..+..+++.+ ..+.+|+.++.++...+.+.+.....+- .++.++..|..+. +..+.++- ..
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~ 84 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDR-NDSIILPCDVTNDAEIETCFASIKEQ 84 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSS-CCCEEEECCCSSSHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCC-CCceEEeCCCCCHHHHHHHHHHHHHH
Confidence 4678999996521 1334444333 2367999999998777777776665543 3688888887642 22221100 01
Q ss_pred CCceeEEEEcCCcc---------------chH-----------HHHHHHHhcCCCCeEEEE
Q 025824 154 HGSFDFIFVDADKD---------------NYL-----------NYHKRLIELVKVGGVIGY 188 (247)
Q Consensus 154 ~~~fD~v~id~~~~---------------~~~-----------~~l~~~~~~L~~gG~lv~ 188 (247)
.+.+|.++..+... .+. ...+.+.+.++++|.||.
T Consensus 85 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~ 145 (266)
T 3oig_A 85 VGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVT 145 (266)
T ss_dssp HSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEE
T ss_pred hCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEE
Confidence 25789888765311 111 234555678888888775
No 403
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=91.66 E-value=0.47 Score=42.55 Aligned_cols=76 Identities=7% Similarity=-0.096 Sum_probs=51.4
Q ss_pred CEEEEEcccccHHHHHHHhhCCCCC-EEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHH-------------
Q 025824 81 KNTMEIGVYTGYSLLATALALPDDG-KILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDL------------- 146 (247)
Q Consensus 81 ~~vLEiG~g~G~st~~la~~~~~~~-~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~------------- 146 (247)
-+++|+-||+|..++-+..+ +. .|.++|+++..++.-+.|+.. .....++.+|..+....
T Consensus 89 ~~viDLFaG~GGlslG~~~a---G~~~v~avE~d~~A~~ty~~N~~~---~p~~~~~~~DI~~i~~~~~~~~~~~~~~~~ 162 (482)
T 3me5_A 89 FRFIDLFAGIGGIRRGFESI---GGQCVFTSEWNKHAVRTYKANHYC---DPATHHFNEDIRDITLSHQEGVSDEAAAEH 162 (482)
T ss_dssp EEEEEESCTTSHHHHHHHTT---TEEEEEEECCCHHHHHHHHHHSCC---CTTTCEEESCTHHHHCTTCTTSCHHHHHHH
T ss_pred ceEEEecCCccHHHHHHHHC---CCEEEEEEeCCHHHHHHHHHhccc---CCCcceeccchhhhhhccccccchhhHHhh
Confidence 47999999999999888764 33 489999999877766666521 12345677888765410
Q ss_pred HHhhhcCCCceeEEEEcCC
Q 025824 147 LIQDEKNHGSFDFIFVDAD 165 (247)
Q Consensus 147 l~~~~~~~~~fD~v~id~~ 165 (247)
+.. ....+|+++...+
T Consensus 163 i~~---~~~~~Dvl~gGpP 178 (482)
T 3me5_A 163 IRQ---HIPEHDVLLAGFP 178 (482)
T ss_dssp HHH---HSCCCSEEEEECC
T ss_pred hhh---cCCCCCEEEecCC
Confidence 000 1357899987654
No 404
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=91.65 E-value=0.38 Score=41.21 Aligned_cols=93 Identities=15% Similarity=0.141 Sum_probs=57.8
Q ss_pred CCEEEEEccc-ccHHHHHHHhhCCCCCEEEEEeCCc---chHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCC
Q 025824 80 AKNTMEIGVY-TGYSLLATALALPDDGKILAMDINR---ENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHG 155 (247)
Q Consensus 80 ~~~vLEiG~g-~G~st~~la~~~~~~~~v~~iD~~~---~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~ 155 (247)
.++||-+|+| .|..++.+++.. +.+|++++.++ +..+.+++ .|. +.+ ..+ +....+.. . ..
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~--Ga~Vi~~~~~~~~~~~~~~~~~----~ga-~~v---~~~--~~~~~~~~-~--~~ 245 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTY--GLEVWMANRREPTEVEQTVIEE----TKT-NYY---NSS--NGYDKLKD-S--VG 245 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHH--TCEEEEEESSCCCHHHHHHHHH----HTC-EEE---ECT--TCSHHHHH-H--HC
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCEEEEEeCCccchHHHHHHHH----hCC-cee---chH--HHHHHHHH-h--CC
Confidence 7899999973 244555666654 46999999998 66655543 454 112 111 32233322 1 25
Q ss_pred ceeEEEEcCCccchHHHH-HHHHhcCCCCeEEEEec
Q 025824 156 SFDFIFVDADKDNYLNYH-KRLIELVKVGGVIGYDN 190 (247)
Q Consensus 156 ~fD~v~id~~~~~~~~~l-~~~~~~L~~gG~lv~d~ 190 (247)
.+|+||-..... ..+ +.+.+.|+++|.++.-.
T Consensus 246 ~~d~vid~~g~~---~~~~~~~~~~l~~~G~iv~~g 278 (366)
T 2cdc_A 246 KFDVIIDATGAD---VNILGNVIPLLGRNGVLGLFG 278 (366)
T ss_dssp CEEEEEECCCCC---THHHHHHGGGEEEEEEEEECS
T ss_pred CCCEEEECCCCh---HHHHHHHHHHHhcCCEEEEEe
Confidence 799987544322 245 77889999999998643
No 405
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=91.59 E-value=0.37 Score=41.71 Aligned_cols=98 Identities=18% Similarity=0.153 Sum_probs=55.1
Q ss_pred cCCCEEEEEccc-ccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCc
Q 025824 78 VNAKNTMEIGVY-TGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGS 156 (247)
Q Consensus 78 ~~~~~vLEiG~g-~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~ 156 (247)
.++++|+-+|+| .|.....++..+ +.+|+++|.+++.++.+++. .|. .+.....+. +.+..+. ..
T Consensus 166 l~g~~V~ViG~G~iG~~~a~~a~~~--Ga~V~~~d~~~~~l~~~~~~---~g~--~~~~~~~~~-~~l~~~l------~~ 231 (377)
T 2vhw_A 166 VEPADVVVIGAGTAGYNAARIANGM--GATVTVLDINIDKLRQLDAE---FCG--RIHTRYSSA-YELEGAV------KR 231 (377)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHH---TTT--SSEEEECCH-HHHHHHH------HH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHh---cCC--eeEeccCCH-HHHHHHH------cC
Confidence 457899999974 233333444444 46999999999876665543 232 222222222 2233331 36
Q ss_pred eeEEEEcCC-cc-chHH-HHHHHHhcCCCCeEEEEe
Q 025824 157 FDFIFVDAD-KD-NYLN-YHKRLIELVKVGGVIGYD 189 (247)
Q Consensus 157 fD~v~id~~-~~-~~~~-~l~~~~~~L~~gG~lv~d 189 (247)
.|+|+.... .. ..+. +.+...+.++|||+|+--
T Consensus 232 aDvVi~~~~~p~~~t~~li~~~~l~~mk~g~~iV~v 267 (377)
T 2vhw_A 232 ADLVIGAVLVPGAKAPKLVSNSLVAHMKPGAVLVDI 267 (377)
T ss_dssp CSEEEECCCCTTSCCCCCBCHHHHTTSCTTCEEEEG
T ss_pred CCEEEECCCcCCCCCcceecHHHHhcCCCCcEEEEE
Confidence 899987432 11 1111 135567889999988743
No 406
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=91.53 E-value=0.34 Score=42.74 Aligned_cols=48 Identities=19% Similarity=0.156 Sum_probs=39.0
Q ss_pred CCCEEEEEcccccHHHHHHHhhCC----CCCEEEEEeCCcchHHHHHHHHHH
Q 025824 79 NAKNTMEIGVYTGYSLLATALALP----DDGKILAMDINRENYELGLPVIQK 126 (247)
Q Consensus 79 ~~~~vLEiG~g~G~st~~la~~~~----~~~~v~~iD~~~~~~~~a~~~~~~ 126 (247)
.+-+|+|+|.|.|..+..+++.+. ...+++.||+|+...+.-++.+..
T Consensus 137 g~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~ 188 (432)
T 4f3n_A 137 GTRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRETLGA 188 (432)
T ss_dssp TCCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHHHHHH
T ss_pred CCCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHHHHhc
Confidence 467999999999999888776542 124899999999998888888764
No 407
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=91.44 E-value=0.73 Score=39.65 Aligned_cols=99 Identities=14% Similarity=0.096 Sum_probs=55.8
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCc
Q 025824 78 VNAKNTMEIGVYTGYSLLATALALP-DDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGS 156 (247)
Q Consensus 78 ~~~~~vLEiG~g~G~st~~la~~~~-~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~ 156 (247)
.++++|+-+|+ |..+..+++.+. .+.+|+.+|.+++..+.+++. .+. .+.....+. +.+.... ..
T Consensus 164 l~~~~V~ViGa--G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~---~g~--~~~~~~~~~-~~l~~~~------~~ 229 (369)
T 2eez_A 164 VAPASVVILGG--GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDV---FGG--RVITLTATE-ANIKKSV------QH 229 (369)
T ss_dssp BCCCEEEEECC--SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH---TTT--SEEEEECCH-HHHHHHH------HH
T ss_pred CCCCEEEEECC--CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHh---cCc--eEEEecCCH-HHHHHHH------hC
Confidence 45689999997 455544443321 256999999999866555432 333 233322222 2233331 36
Q ss_pred eeEEEEcCCccc--hHH-HHHHHHhcCCCCeEEEEec
Q 025824 157 FDFIFVDADKDN--YLN-YHKRLIELVKVGGVIGYDN 190 (247)
Q Consensus 157 fD~v~id~~~~~--~~~-~l~~~~~~L~~gG~lv~d~ 190 (247)
+|+|+....... .+. ..+...+.+++||+|+.-.
T Consensus 230 ~DvVi~~~g~~~~~~~~li~~~~l~~mk~gg~iV~v~ 266 (369)
T 2eez_A 230 ADLLIGAVLVPGAKAPKLVTRDMLSLMKEGAVIVDVA 266 (369)
T ss_dssp CSEEEECCC-------CCSCHHHHTTSCTTCEEEECC
T ss_pred CCEEEECCCCCccccchhHHHHHHHhhcCCCEEEEEe
Confidence 899976554221 111 1356678899999887543
No 408
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=91.23 E-value=0.49 Score=40.63 Aligned_cols=97 Identities=19% Similarity=0.106 Sum_probs=59.3
Q ss_pred hcCCCEEEEEc--ccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCC
Q 025824 77 LVNAKNTMEIG--VYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNH 154 (247)
Q Consensus 77 ~~~~~~vLEiG--~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~ 154 (247)
..+.++||-+| .+.|..++.+++.. +++|++++ +++..+.+ +..|.. .++..+..+....+.. .
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~--Ga~Vi~~~-~~~~~~~~----~~lGa~---~v~~~~~~~~~~~~~~----~ 246 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAW--DAHVTAVC-SQDASELV----RKLGAD---DVIDYKSGSVEEQLKS----L 246 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEE-CGGGHHHH----HHTTCS---EEEETTSSCHHHHHHT----S
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhC--CCEEEEEe-ChHHHHHH----HHcCCC---EEEECCchHHHHHHhh----c
Confidence 34567999999 34677778888876 47999998 66655554 445642 2222222223333321 2
Q ss_pred CceeEEEEcCCccchHHHHHHHHhcCCCCeEEEEe
Q 025824 155 GSFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYD 189 (247)
Q Consensus 155 ~~fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv~d 189 (247)
..+|+||-.... ....+....+.|++||.++.-
T Consensus 247 ~g~D~vid~~g~--~~~~~~~~~~~l~~~G~iv~~ 279 (375)
T 2vn8_A 247 KPFDFILDNVGG--STETWAPDFLKKWSGATYVTL 279 (375)
T ss_dssp CCBSEEEESSCT--THHHHGGGGBCSSSCCEEEES
T ss_pred CCCCEEEECCCC--hhhhhHHHHHhhcCCcEEEEe
Confidence 479988744332 113456777899999999863
No 409
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=91.20 E-value=0.52 Score=40.00 Aligned_cols=96 Identities=9% Similarity=-0.083 Sum_probs=56.6
Q ss_pred CEEEEE-cc-cccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCcee
Q 025824 81 KNTMEI-GV-YTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFD 158 (247)
Q Consensus 81 ~~vLEi-G~-g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~fD 158 (247)
++||-. |+ +.|..++.+++.. +++|++++.+++..+.+++ .|.. .++..+..+....+.... ....+|
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~----~Ga~---~~~~~~~~~~~~~v~~~~-~~~g~D 235 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEE--GFRPIVTVRRDEQIALLKD----IGAA---HVLNEKAPDFEATLREVM-KAEQPR 235 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHH--TCEEEEEESCGGGHHHHHH----HTCS---EEEETTSTTHHHHHHHHH-HHHCCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH----cCCC---EEEECCcHHHHHHHHHHh-cCCCCc
Confidence 566654 32 2455666677765 5799999999998877764 4542 222222222222221110 024699
Q ss_pred EEEEcCCccchHHHHHHHHhcCCCCeEEEEec
Q 025824 159 FIFVDADKDNYLNYHKRLIELVKVGGVIGYDN 190 (247)
Q Consensus 159 ~v~id~~~~~~~~~l~~~~~~L~~gG~lv~d~ 190 (247)
+||-.... ..+..+.+.|+++|.++.-.
T Consensus 236 ~vid~~g~----~~~~~~~~~l~~~G~iv~~G 263 (349)
T 3pi7_A 236 IFLDAVTG----PLASAIFNAMPKRARWIIYG 263 (349)
T ss_dssp EEEESSCH----HHHHHHHHHSCTTCEEEECC
T ss_pred EEEECCCC----hhHHHHHhhhcCCCEEEEEe
Confidence 88743332 23467788999999999754
No 410
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=90.52 E-value=0.9 Score=35.66 Aligned_cols=95 Identities=13% Similarity=0.039 Sum_probs=59.4
Q ss_pred EEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCceeEE
Q 025824 82 NTMEIGVYTGYSLLATALALP-DDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDFI 160 (247)
Q Consensus 82 ~vLEiG~g~G~st~~la~~~~-~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~fD~v 160 (247)
+|+=+| .|..+..+++.+. .+..|+.+|.+++.++...+ ..+ +.++.||+.+. ..+... .-...|+|
T Consensus 2 ~iiIiG--~G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~---~~~----~~~i~gd~~~~-~~l~~a--~i~~ad~v 69 (218)
T 3l4b_C 2 KVIIIG--GETTAYYLARSMLSRKYGVVIINKDRELCEEFAK---KLK----ATIIHGDGSHK-EILRDA--EVSKNDVV 69 (218)
T ss_dssp CEEEEC--CHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH---HSS----SEEEESCTTSH-HHHHHH--TCCTTCEE
T ss_pred EEEEEC--CCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH---HcC----CeEEEcCCCCH-HHHHhc--CcccCCEE
Confidence 467777 4777777777653 35689999999987654332 223 57889998653 222211 14678999
Q ss_pred EEcCCccchHHHHHHHHhcCCCCeEEEE
Q 025824 161 FVDADKDNYLNYHKRLIELVKVGGVIGY 188 (247)
Q Consensus 161 ~id~~~~~~~~~l~~~~~~L~~gG~lv~ 188 (247)
++-.+.......+....+.+.+...+++
T Consensus 70 i~~~~~d~~n~~~~~~a~~~~~~~~iia 97 (218)
T 3l4b_C 70 VILTPRDEVNLFIAQLVMKDFGVKRVVS 97 (218)
T ss_dssp EECCSCHHHHHHHHHHHHHTSCCCEEEE
T ss_pred EEecCCcHHHHHHHHHHHHHcCCCeEEE
Confidence 8876644444445555565666666664
No 411
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=90.45 E-value=1.6 Score=38.54 Aligned_cols=102 Identities=12% Similarity=0.174 Sum_probs=59.1
Q ss_pred hhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHH------------HHHcCCCCcEEEEEecchhh
Q 025824 76 KLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPV------------IQKAGVAHKIDFREGPALPV 143 (247)
Q Consensus 76 ~~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~------------~~~~g~~~~i~~~~gd~~~~ 143 (247)
+.....+|--||+ |+.+..+|..+..+.+|+++|++++.++..++. +... ..++++ ..|..+.
T Consensus 32 r~~~~mkIaVIGl--G~mG~~lA~~La~G~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~~--~~~l~~-ttd~~ea 106 (432)
T 3pid_A 32 RGSEFMKITISGT--GYVGLSNGVLIAQNHEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAEK--PLNFRA-TTDKHDA 106 (432)
T ss_dssp ---CCCEEEEECC--SHHHHHHHHHHHTTSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHS--CCCEEE-ESCHHHH
T ss_pred cccCCCEEEEECc--CHHHHHHHHHHHcCCeEEEEecCHHHhhHHhccCCccccccHHHHHhhc--cCCeEE-EcCHHHH
Confidence 3344567888884 666666665554467999999999987765431 1110 112332 1222222
Q ss_pred hHHHHhhhcCCCceeEEEEcCCcc-----------chHHHHHHHHhcCCCCeEEEEecccc
Q 025824 144 LDLLIQDEKNHGSFDFIFVDADKD-----------NYLNYHKRLIELVKVGGVIGYDNTLW 193 (247)
Q Consensus 144 l~~l~~~~~~~~~fD~v~id~~~~-----------~~~~~l~~~~~~L~~gG~lv~d~~~~ 193 (247)
+ ...|+||+..+.. ......+.+.+ |+||.+++..-+..
T Consensus 107 ~----------~~aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~g~iVV~~STv~ 156 (432)
T 3pid_A 107 Y----------RNADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTE-INPNAVMIIKSTIP 156 (432)
T ss_dssp H----------TTCSEEEECCCCEEETTTTEEECHHHHHHHHHHHH-HCTTSEEEECSCCC
T ss_pred H----------hCCCEEEEeCCCccccccccccHHHHHHHHHHHHh-cCCCcEEEEeCCCC
Confidence 1 3579998865421 23455667778 99998887654443
No 412
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=90.01 E-value=1.3 Score=36.23 Aligned_cols=88 Identities=22% Similarity=0.309 Sum_probs=54.4
Q ss_pred CEEEEEcccccHHHHHHHhhCCC-CC--EEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCC-c
Q 025824 81 KNTMEIGVYTGYSLLATALALPD-DG--KILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHG-S 156 (247)
Q Consensus 81 ~~vLEiG~g~G~st~~la~~~~~-~~--~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~-~ 156 (247)
++|.=||+ |..+..++..+.. +. +|+++|.+++.++.++ ..|... . ...+..+. -. .
T Consensus 2 ~~I~iIG~--G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~----~~g~~~--~-~~~~~~~~----------~~~~ 62 (281)
T 2g5c_A 2 QNVLIVGV--GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAV----DLGIID--E-GTTSIAKV----------EDFS 62 (281)
T ss_dssp CEEEEESC--SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHH----HTTSCS--E-EESCGGGG----------GGTC
T ss_pred cEEEEEec--CHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHH----HCCCcc--c-ccCCHHHH----------hcCC
Confidence 36777885 5555555444321 23 7999999988665543 345421 1 11222221 24 6
Q ss_pred eeEEEEcCCccchHHHHHHHHhcCCCCeEEE
Q 025824 157 FDFIFVDADKDNYLNYHKRLIELVKVGGVIG 187 (247)
Q Consensus 157 fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv 187 (247)
.|+||+..+.......++.+.+.++++.+|+
T Consensus 63 aDvVilavp~~~~~~v~~~l~~~l~~~~iv~ 93 (281)
T 2g5c_A 63 PDFVMLSSPVRTFREIAKKLSYILSEDATVT 93 (281)
T ss_dssp CSEEEECSCHHHHHHHHHHHHHHSCTTCEEE
T ss_pred CCEEEEcCCHHHHHHHHHHHHhhCCCCcEEE
Confidence 8999998776666677777878899888665
No 413
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=89.94 E-value=0.65 Score=39.64 Aligned_cols=99 Identities=11% Similarity=0.054 Sum_probs=58.3
Q ss_pred HhhcCCCEEEEEccc-ccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecc--hhhhHHHHhhh
Q 025824 75 LKLVNAKNTMEIGVY-TGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPA--LPVLDLLIQDE 151 (247)
Q Consensus 75 ~~~~~~~~vLEiG~g-~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~--~~~l~~l~~~~ 151 (247)
....+..+||-+|+| .|..++.+++..+ +++|++++.+++..+.++ +.|.. .++.-.. .+.+..+.
T Consensus 182 ~~~~~g~~VlV~GaG~vG~~avqlak~~~-Ga~Vi~~~~~~~~~~~~~----~lGa~---~vi~~~~~~~~~v~~~~--- 250 (359)
T 1h2b_A 182 RTLYPGAYVAIVGVGGLGHIAVQLLKVMT-PATVIALDVKEEKLKLAE----RLGAD---HVVDARRDPVKQVMELT--- 250 (359)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHHC-CCEEEEEESSHHHHHHHH----HTTCS---EEEETTSCHHHHHHHHT---
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEeCCHHHHHHHH----HhCCC---EEEeccchHHHHHHHHh---
Confidence 344566899999974 3445566777652 469999999998777665 35642 2222111 12222221
Q ss_pred cCCCceeEEEEcCCccchHH--HHHHHHhcCCCCeEEEEec
Q 025824 152 KNHGSFDFIFVDADKDNYLN--YHKRLIELVKVGGVIGYDN 190 (247)
Q Consensus 152 ~~~~~fD~v~id~~~~~~~~--~l~~~~~~L~~gG~lv~d~ 190 (247)
....+|+||-.... .. .++.+.+. ++|.++.-.
T Consensus 251 -~g~g~Dvvid~~G~---~~~~~~~~~~~~--~~G~~v~~g 285 (359)
T 1h2b_A 251 -RGRGVNVAMDFVGS---QATVDYTPYLLG--RMGRLIIVG 285 (359)
T ss_dssp -TTCCEEEEEESSCC---HHHHHHGGGGEE--EEEEEEECC
T ss_pred -CCCCCcEEEECCCC---chHHHHHHHhhc--CCCEEEEEe
Confidence 12379988743322 22 56666666 999988643
No 414
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=89.89 E-value=5.8 Score=32.57 Aligned_cols=84 Identities=15% Similarity=0.118 Sum_probs=51.4
Q ss_pred CCCEEEEEcccc-cHHHHHHHhhC-CCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhh--hHHHHhhh-cC
Q 025824 79 NAKNTMEIGVYT-GYSLLATALAL-PDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPV--LDLLIQDE-KN 153 (247)
Q Consensus 79 ~~~~vLEiG~g~-G~st~~la~~~-~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~--l~~l~~~~-~~ 153 (247)
..+++|-.|.+. ...+..+++.+ ..+.+|+.++.+++..+.+.+.....+ ++.++..|..+. +..+.++- ..
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~Dv~d~~~v~~~~~~~~~~ 105 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLG---VKLTVPCDVSDAESVDNMFKVLAEE 105 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHT---CCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcC---CeEEEEcCCCCHHHHHHHHHHHHHH
Confidence 467899999743 23444444443 236899999999887776666666554 357788887642 22221110 01
Q ss_pred CCceeEEEEcCC
Q 025824 154 HGSFDFIFVDAD 165 (247)
Q Consensus 154 ~~~fD~v~id~~ 165 (247)
.+.+|+++..+.
T Consensus 106 ~g~iD~lVnnAG 117 (296)
T 3k31_A 106 WGSLDFVVHAVA 117 (296)
T ss_dssp HSCCSEEEECCC
T ss_pred cCCCCEEEECCC
Confidence 257999987654
No 415
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=89.66 E-value=1.6 Score=38.65 Aligned_cols=97 Identities=16% Similarity=0.192 Sum_probs=57.7
Q ss_pred CEEEEEcccccHHHHHHHhhCCC-CCEEEEEeCCcchHHHHHHH------------HHHcCCCCcEEEEEecchhhhHHH
Q 025824 81 KNTMEIGVYTGYSLLATALALPD-DGKILAMDINRENYELGLPV------------IQKAGVAHKIDFREGPALPVLDLL 147 (247)
Q Consensus 81 ~~vLEiG~g~G~st~~la~~~~~-~~~v~~iD~~~~~~~~a~~~------------~~~~g~~~~i~~~~gd~~~~l~~l 147 (247)
.+|.-||+ |+.+..++..+.. +.+|+++|++++.++..++. +...-...++++. .|..+.
T Consensus 3 mkI~VIG~--G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t-~d~~ea---- 75 (450)
T 3gg2_A 3 LDIAVVGI--GYVGLVSATCFAELGANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFG-TEIEQA---- 75 (450)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEE-SCHHHH----
T ss_pred CEEEEECc--CHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEE-CCHHHH----
Confidence 46777874 6776666655432 46899999999877665441 0000001223331 222221
Q ss_pred HhhhcCCCceeEEEEcCCcc----------chHHHHHHHHhcCCCCeEEEEec
Q 025824 148 IQDEKNHGSFDFIFVDADKD----------NYLNYHKRLIELVKVGGVIGYDN 190 (247)
Q Consensus 148 ~~~~~~~~~fD~v~id~~~~----------~~~~~l~~~~~~L~~gG~lv~d~ 190 (247)
-...|+||+..+.. .....++.+.+.|++|.+++..-
T Consensus 76 ------~~~aDvViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~~S 122 (450)
T 3gg2_A 76 ------VPEADIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVTKS 122 (450)
T ss_dssp ------GGGCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECS
T ss_pred ------HhcCCEEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEEee
Confidence 13579999876533 45667788888999988777543
No 416
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=89.57 E-value=6 Score=31.98 Aligned_cols=107 Identities=17% Similarity=0.166 Sum_probs=63.9
Q ss_pred CCCEEEEEcccccHHHHHHHhhCC-CCCEEEEEeCC------------cchHHHHHHHHHHcCCCCcEEEEEecchhh--
Q 025824 79 NAKNTMEIGVYTGYSLLATALALP-DDGKILAMDIN------------RENYELGLPVIQKAGVAHKIDFREGPALPV-- 143 (247)
Q Consensus 79 ~~~~vLEiG~g~G~st~~la~~~~-~~~~v~~iD~~------------~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~-- 143 (247)
..+++|-.|++ |..+..+++.+. .+.+|+.++.+ .+.++.+...+...+ .++.++..|..+.
T Consensus 9 ~gk~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~ 85 (287)
T 3pxx_A 9 QDKVVLVTGGA-RGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTG--RKAYTAEVDVRDRAA 85 (287)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTT--SCEEEEECCTTCHHH
T ss_pred CCCEEEEeCCC-ChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcC--CceEEEEccCCCHHH
Confidence 46789999965 455566665542 36799999987 455555555555554 4788999887652
Q ss_pred hHHHHhhh-cCCCceeEEEEcCCc---------cchH-----------HHHHHHHhcCCCCeEEEE
Q 025824 144 LDLLIQDE-KNHGSFDFIFVDADK---------DNYL-----------NYHKRLIELVKVGGVIGY 188 (247)
Q Consensus 144 l~~l~~~~-~~~~~fD~v~id~~~---------~~~~-----------~~l~~~~~~L~~gG~lv~ 188 (247)
+..+.++- ...+.+|+++..+.. +.+. ...+.+.+.++++|.|+.
T Consensus 86 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~ 151 (287)
T 3pxx_A 86 VSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIIT 151 (287)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEE
T ss_pred HHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEE
Confidence 22221100 012579999876541 1111 233455577788888775
No 417
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=89.48 E-value=2.3 Score=29.68 Aligned_cols=75 Identities=13% Similarity=0.064 Sum_probs=50.8
Q ss_pred EEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCceeEEEEcCC--ccchHHHHHHHHhcCCCC
Q 025824 106 KILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDFIFVDAD--KDNYLNYHKRLIELVKVG 183 (247)
Q Consensus 106 ~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~fD~v~id~~--~~~~~~~l~~~~~~L~~g 183 (247)
+|..+|-++......+..+...|. .+.....+..+.+..+. ...+|+|++|.. ..+-.+.++.+.+. .|+
T Consensus 3 ~ilivdd~~~~~~~l~~~L~~~g~--~v~~~~~~~~~a~~~~~-----~~~~dlii~d~~l~~~~g~~~~~~l~~~-~~~ 74 (134)
T 3f6c_A 3 NAIIIDDHPLAIAAIRNLLIKNDI--EILAELTEGGSAVQRVE-----TLKPDIVIIDVDIPGVNGIQVLETLRKR-QYS 74 (134)
T ss_dssp EEEEECCCHHHHHHHHHHHHHTTE--EEEEEESSSTTHHHHHH-----HHCCSEEEEETTCSSSCHHHHHHHHHHT-TCC
T ss_pred EEEEEcCCHHHHHHHHHHHhhCCc--EEEEEcCCHHHHHHHHH-----hcCCCEEEEecCCCCCChHHHHHHHHhc-CCC
Confidence 688999999999999999988763 23334566666666553 357999999976 33445666666654 344
Q ss_pred e-EEEE
Q 025824 184 G-VIGY 188 (247)
Q Consensus 184 G-~lv~ 188 (247)
. +|++
T Consensus 75 ~~ii~~ 80 (134)
T 3f6c_A 75 GIIIIV 80 (134)
T ss_dssp SEEEEE
T ss_pred CeEEEE
Confidence 3 4443
No 418
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=89.26 E-value=7.4 Score=31.21 Aligned_cols=83 Identities=7% Similarity=0.029 Sum_probs=52.9
Q ss_pred cCCCEEEEEcc----cccHH-HHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhh--hHHHHhh
Q 025824 78 VNAKNTMEIGV----YTGYS-LLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPV--LDLLIQD 150 (247)
Q Consensus 78 ~~~~~vLEiG~----g~G~s-t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~--l~~l~~~ 150 (247)
.+.+++|-.|. |.|.. +..|++ .+++|+.++.+++..+.+.+.+++.+- .++.++..|..+. +..+.++
T Consensus 4 l~gK~alVTGaa~~~GIG~aiA~~la~---~Ga~Vvi~~r~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~ 79 (256)
T 4fs3_A 4 LENKTYVIMGIANKRSIAFGVAKVLDQ---LGAKLVFTYRKERSRKELEKLLEQLNQ-PEAHLYQIDVQSDEEVINGFEQ 79 (256)
T ss_dssp CTTCEEEEECCCSTTCHHHHHHHHHHH---TTCEEEEEESSGGGHHHHHHHHGGGTC-SSCEEEECCTTCHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHH---CCCEEEEEECCHHHHHHHHHHHHhcCC-CcEEEEEccCCCHHHHHHHHHH
Confidence 35788999995 34442 233443 378999999999988888888877653 3678888887542 2221110
Q ss_pred h-cCCCceeEEEEcC
Q 025824 151 E-KNHGSFDFIFVDA 164 (247)
Q Consensus 151 ~-~~~~~fD~v~id~ 164 (247)
- ...+..|+++..+
T Consensus 80 ~~~~~G~iD~lvnnA 94 (256)
T 4fs3_A 80 IGKDVGNIDGVYHSI 94 (256)
T ss_dssp HHHHHCCCSEEEECC
T ss_pred HHHHhCCCCEEEecc
Confidence 0 0136899888654
No 419
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=89.17 E-value=4.3 Score=28.72 Aligned_cols=80 Identities=11% Similarity=0.105 Sum_probs=52.8
Q ss_pred CCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCceeEEEEcCCc--cchHHHHHHHHhc-C
Q 025824 104 DGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDFIFVDADK--DNYLNYHKRLIEL-V 180 (247)
Q Consensus 104 ~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~fD~v~id~~~--~~~~~~l~~~~~~-L 180 (247)
..+|..+|-++......+..+...|... .-....+..+.+..+. ..++|+|++|... .+-.+.++.+.+. .
T Consensus 5 ~~~ILivdd~~~~~~~l~~~L~~~~~~~-~v~~~~~~~~a~~~l~-----~~~~dlii~D~~l~~~~g~~~~~~lr~~~~ 78 (144)
T 3kht_A 5 SKRVLVVEDNPDDIALIRRVLDRKDIHC-QLEFVDNGAKALYQVQ-----QAKYDLIILDIGLPIANGFEVMSAVRKPGA 78 (144)
T ss_dssp CEEEEEECCCHHHHHHHHHHHHHTTCCE-EEEEESSHHHHHHHHT-----TCCCSEEEECTTCGGGCHHHHHHHHHSSST
T ss_pred CCEEEEEeCCHHHHHHHHHHHHhcCCCe-eEEEECCHHHHHHHhh-----cCCCCEEEEeCCCCCCCHHHHHHHHHhccc
Confidence 4589999999999999999999887631 1233456666666552 5689999999763 3345666666552 2
Q ss_pred CCC-eEEEEe
Q 025824 181 KVG-GVIGYD 189 (247)
Q Consensus 181 ~~g-G~lv~d 189 (247)
.++ -+|++.
T Consensus 79 ~~~~pii~~s 88 (144)
T 3kht_A 79 NQHTPIVILT 88 (144)
T ss_dssp TTTCCEEEEE
T ss_pred ccCCCEEEEe
Confidence 233 355543
No 420
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=89.10 E-value=3.4 Score=29.69 Aligned_cols=77 Identities=12% Similarity=0.039 Sum_probs=51.6
Q ss_pred CCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCceeEEEEcCCc--cchHHHHHHHHhcCC
Q 025824 104 DGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDFIFVDADK--DNYLNYHKRLIELVK 181 (247)
Q Consensus 104 ~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~fD~v~id~~~--~~~~~~l~~~~~~L~ 181 (247)
..+|..+|-++......+..+...|. .+. ...+..+.+..+. ...+|+|++|... .+-...++.+...-.
T Consensus 7 ~~~iLivdd~~~~~~~l~~~L~~~g~--~v~-~~~~~~~a~~~l~-----~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~ 78 (154)
T 2rjn_A 7 NYTVMLVDDEQPILNSLKRLIKRLGC--NII-TFTSPLDALEALK-----GTSVQLVISDMRMPEMGGEVFLEQVAKSYP 78 (154)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHTTTC--EEE-EESCHHHHHHHHT-----TSCCSEEEEESSCSSSCHHHHHHHHHHHCT
T ss_pred CCeEEEEcCCHHHHHHHHHHHHHcCC--eEE-EeCCHHHHHHHHh-----cCCCCEEEEecCCCCCCHHHHHHHHHHhCC
Confidence 56899999999999999999988765 333 4556666665552 4679999999762 234556666655333
Q ss_pred CCeEEEE
Q 025824 182 VGGVIGY 188 (247)
Q Consensus 182 ~gG~lv~ 188 (247)
.--+|++
T Consensus 79 ~~~ii~l 85 (154)
T 2rjn_A 79 DIERVVI 85 (154)
T ss_dssp TSEEEEE
T ss_pred CCcEEEE
Confidence 3344554
No 421
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=89.08 E-value=4.4 Score=33.20 Aligned_cols=107 Identities=18% Similarity=0.205 Sum_probs=63.9
Q ss_pred CCCEEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCcch-HHHHHHHHHHcCCCCcEEEEEecchhh--hHHHHhhh-cC
Q 025824 79 NAKNTMEIGVYTGYSLLATALALP-DDGKILAMDINREN-YELGLPVIQKAGVAHKIDFREGPALPV--LDLLIQDE-KN 153 (247)
Q Consensus 79 ~~~~vLEiG~g~G~st~~la~~~~-~~~~v~~iD~~~~~-~~~a~~~~~~~g~~~~i~~~~gd~~~~--l~~l~~~~-~~ 153 (247)
+.+++|-.|.+ |..+..+++.+. .+.+|+.++.+++. .+...+.++..+ .++.++.+|..+. +..+.++- ..
T Consensus 46 ~gk~vlVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~ 122 (291)
T 3ijr_A 46 KGKNVLITGGD-SGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEG--VKCVLLPGDLSDEQHCKDIVQETVRQ 122 (291)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTT--CCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 46789999954 556666666542 36799999998763 444455555544 4688999988652 22221100 01
Q ss_pred CCceeEEEEcCCc----c--------ch-----------HHHHHHHHhcCCCCeEEEE
Q 025824 154 HGSFDFIFVDADK----D--------NY-----------LNYHKRLIELVKVGGVIGY 188 (247)
Q Consensus 154 ~~~fD~v~id~~~----~--------~~-----------~~~l~~~~~~L~~gG~lv~ 188 (247)
.+.+|+++..+.. . .+ ....+.+.+.++++|.||.
T Consensus 123 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~ 180 (291)
T 3ijr_A 123 LGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIIN 180 (291)
T ss_dssp HSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEE
T ss_pred cCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEE
Confidence 2578999876431 0 11 1233455678888888775
No 422
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=88.82 E-value=3 Score=28.78 Aligned_cols=76 Identities=17% Similarity=0.201 Sum_probs=51.4
Q ss_pred CEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCceeEEEEcCC--ccchHHHHHHHHhc--C
Q 025824 105 GKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDFIFVDAD--KDNYLNYHKRLIEL--V 180 (247)
Q Consensus 105 ~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~fD~v~id~~--~~~~~~~l~~~~~~--L 180 (247)
.+|..+|-++...+..++.+...|. .+. ...+..+.+..+. ...+|+|++|.. ..+-.+.++.+.+. .
T Consensus 4 ~~ilivdd~~~~~~~l~~~L~~~g~--~v~-~~~~~~~a~~~l~-----~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~ 75 (127)
T 3i42_A 4 QQALIVEDYQAAAETFKELLEMLGF--QAD-YVMSGTDALHAMS-----TRGYDAVFIDLNLPDTSGLALVKQLRALPME 75 (127)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHTTE--EEE-EESSHHHHHHHHH-----HSCCSEEEEESBCSSSBHHHHHHHHHHSCCS
T ss_pred ceEEEEcCCHHHHHHHHHHHHHcCC--CEE-EECCHHHHHHHHH-----hcCCCEEEEeCCCCCCCHHHHHHHHHhhhcc
Confidence 5799999999999999999998775 233 3455656665553 357999999975 33445677777654 3
Q ss_pred CCCeEEEE
Q 025824 181 KVGGVIGY 188 (247)
Q Consensus 181 ~~gG~lv~ 188 (247)
..--+|++
T Consensus 76 ~~~~ii~~ 83 (127)
T 3i42_A 76 KTSKFVAV 83 (127)
T ss_dssp SCCEEEEE
T ss_pred CCCCEEEE
Confidence 33344444
No 423
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=88.81 E-value=3.4 Score=33.73 Aligned_cols=89 Identities=17% Similarity=0.172 Sum_probs=54.5
Q ss_pred CCEEEEEcccccHHHHHHHhhC---CCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCc
Q 025824 80 AKNTMEIGVYTGYSLLATALAL---PDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGS 156 (247)
Q Consensus 80 ~~~vLEiG~g~G~st~~la~~~---~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~ 156 (247)
..+|.=||+| ..+..++..+ +.+.+|+++|.+++..+.+.+ .|... ....+..+.+ ..
T Consensus 6 ~~~I~iIG~G--~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~----~g~~~---~~~~~~~~~~----------~~ 66 (290)
T 3b1f_A 6 EKTIYIAGLG--LIGASLALGIKRDHPHYKIVGYNRSDRSRDIALE----RGIVD---EATADFKVFA----------AL 66 (290)
T ss_dssp CCEEEEECCS--HHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHH----TTSCS---EEESCTTTTG----------GG
T ss_pred cceEEEEeeC--HHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHH----cCCcc---cccCCHHHhh----------cC
Confidence 3578889865 4444433332 114689999999886654432 44321 1122332221 35
Q ss_pred eeEEEEcCCccchHHHHHHHHhc-CCCCeEEE
Q 025824 157 FDFIFVDADKDNYLNYHKRLIEL-VKVGGVIG 187 (247)
Q Consensus 157 fD~v~id~~~~~~~~~l~~~~~~-L~~gG~lv 187 (247)
.|+||+-.+.......++.+.+. ++++.+|+
T Consensus 67 aDvVilavp~~~~~~v~~~l~~~~l~~~~ivi 98 (290)
T 3b1f_A 67 ADVIILAVPIKKTIDFIKILADLDLKEDVIIT 98 (290)
T ss_dssp CSEEEECSCHHHHHHHHHHHHTSCCCTTCEEE
T ss_pred CCEEEEcCCHHHHHHHHHHHHhcCCCCCCEEE
Confidence 79999988766667778888788 88877665
No 424
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=88.69 E-value=0.98 Score=38.41 Aligned_cols=100 Identities=10% Similarity=0.102 Sum_probs=54.5
Q ss_pred hcCCCEEEEEcc--cccHHHHHHHhhCCCCCEEE-EEeCCcchHHHHHHHHHHcCCCCcEEEEEecc--hhhhHHHHhhh
Q 025824 77 LVNAKNTMEIGV--YTGYSLLATALALPDDGKIL-AMDINRENYELGLPVIQKAGVAHKIDFREGPA--LPVLDLLIQDE 151 (247)
Q Consensus 77 ~~~~~~vLEiG~--g~G~st~~la~~~~~~~~v~-~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~--~~~l~~l~~~~ 151 (247)
..+..+||-+|+ +.|..++.+++.. +++++ +++.++.. +..++.++..|.. .++..+- .+.+..+..
T Consensus 165 ~~~g~~VlV~Ga~G~vG~~aiqlak~~--Ga~vi~~~~~~~~~-~~~~~~~~~lGa~---~vi~~~~~~~~~~~~~~~-- 236 (357)
T 1zsy_A 165 LQPGDSVIQNASNSGVGQAVIQIAAAL--GLRTINVVRDRPDI-QKLSDRLKSLGAE---HVITEEELRRPEMKNFFK-- 236 (357)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHH--TCEEEEEECCCSCH-HHHHHHHHHTTCS---EEEEHHHHHSGGGGGTTS--
T ss_pred cCCCCEEEEeCCcCHHHHHHHHHHHHc--CCEEEEEecCccch-HHHHHHHHhcCCc---EEEecCcchHHHHHHHHh--
Confidence 345689999996 5677888888876 45554 45554432 1122344556752 2222110 011222110
Q ss_pred cCCCceeEEEEcCCccchHHHHHHHHhcCCCCeEEEEe
Q 025824 152 KNHGSFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYD 189 (247)
Q Consensus 152 ~~~~~fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv~d 189 (247)
..+.+|+|| |+.-. .. ...+.+.|+++|.++.-
T Consensus 237 -~~~~~Dvvi-d~~g~--~~-~~~~~~~l~~~G~iv~~ 269 (357)
T 1zsy_A 237 -DMPQPRLAL-NCVGG--KS-STELLRQLARGGTMVTY 269 (357)
T ss_dssp -SSCCCSEEE-ESSCH--HH-HHHHHTTSCTTCEEEEC
T ss_pred -CCCCceEEE-ECCCc--HH-HHHHHHhhCCCCEEEEE
Confidence 012589886 44321 22 24578999999999864
No 425
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=88.38 E-value=4.8 Score=28.23 Aligned_cols=77 Identities=13% Similarity=0.109 Sum_probs=52.6
Q ss_pred CCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCceeEEEEcCC--ccchHHHHHHHHh--c
Q 025824 104 DGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDFIFVDAD--KDNYLNYHKRLIE--L 179 (247)
Q Consensus 104 ~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~fD~v~id~~--~~~~~~~l~~~~~--~ 179 (247)
..+|..+|-++......+..+...|. .+ ....+..+.+..+. ..++|+|++|.. ..+-.++++.+.+ .
T Consensus 6 ~~~iLivdd~~~~~~~l~~~l~~~g~--~v-~~~~~~~~a~~~l~-----~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~ 77 (140)
T 3grc_A 6 RPRILICEDDPDIARLLNLMLEKGGF--DS-DMVHSAAQALEQVA-----RRPYAAMTVDLNLPDQDGVSLIRALRRDSR 77 (140)
T ss_dssp CSEEEEECSCHHHHHHHHHHHHHTTC--EE-EEECSHHHHHHHHH-----HSCCSEEEECSCCSSSCHHHHHHHHHTSGG
T ss_pred CCCEEEEcCCHHHHHHHHHHHHHCCC--eE-EEECCHHHHHHHHH-----hCCCCEEEEeCCCCCCCHHHHHHHHHhCcc
Confidence 46899999999999999999998775 23 34556666666553 367999999976 3344566666665 2
Q ss_pred CCCCeEEEE
Q 025824 180 VKVGGVIGY 188 (247)
Q Consensus 180 L~~gG~lv~ 188 (247)
...--+|++
T Consensus 78 ~~~~~ii~~ 86 (140)
T 3grc_A 78 TRDLAIVVV 86 (140)
T ss_dssp GTTCEEEEE
T ss_pred cCCCCEEEE
Confidence 333344554
No 426
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=88.37 E-value=4.5 Score=33.20 Aligned_cols=109 Identities=18% Similarity=0.274 Sum_probs=63.6
Q ss_pred HHhhcCCCEEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhh--hHHHHhh
Q 025824 74 LLKLVNAKNTMEIGVYTGYSLLATALALP-DDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPV--LDLLIQD 150 (247)
Q Consensus 74 l~~~~~~~~vLEiG~g~G~st~~la~~~~-~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~--l~~l~~~ 150 (247)
+....+.+.+|-.|.+.| .+..+++.+. .+++|+.++.+++.++.+.+ +.+ .++..+.+|..+. +..+.++
T Consensus 23 Ms~rL~gKvalVTGas~G-IG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~---~~g--~~~~~~~~Dv~~~~~v~~~~~~ 96 (273)
T 4fgs_A 23 MTQRLNAKIAVITGATSG-IGLAAAKRFVAEGARVFITGRRKDVLDAAIA---EIG--GGAVGIQADSANLAELDRLYEK 96 (273)
T ss_dssp --CTTTTCEEEEESCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHH---HHC--TTCEEEECCTTCHHHHHHHHHH
T ss_pred hcchhCCCEEEEeCcCCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHH---HcC--CCeEEEEecCCCHHHHHHHHHH
Confidence 334457789999997655 4555555442 47899999999887665443 333 3567778887542 2222111
Q ss_pred h-cCCCceeEEEEcCC-----------ccchH-----------HHHHHHHhcCCCCeEEEE
Q 025824 151 E-KNHGSFDFIFVDAD-----------KDNYL-----------NYHKRLIELVKVGGVIGY 188 (247)
Q Consensus 151 ~-~~~~~fD~v~id~~-----------~~~~~-----------~~l~~~~~~L~~gG~lv~ 188 (247)
- ...++.|+++..+. .+.+. ...+.+.+.++++|.||.
T Consensus 97 ~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IIn 157 (273)
T 4fgs_A 97 VKAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVL 157 (273)
T ss_dssp HHHHHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEE
T ss_pred HHHHcCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEE
Confidence 0 01368999887653 11111 122444578888888765
No 427
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=88.32 E-value=2.6 Score=30.65 Aligned_cols=79 Identities=13% Similarity=0.042 Sum_probs=52.0
Q ss_pred CEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCceeEEEEcCC--ccchHHHHHHHHhcCCC
Q 025824 105 GKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDFIFVDAD--KDNYLNYHKRLIELVKV 182 (247)
Q Consensus 105 ~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~fD~v~id~~--~~~~~~~l~~~~~~L~~ 182 (247)
.+|..+|-++......+..+...|. ++.....+..+.+..+... ...+|+|++|.. ..+-...++.+.+.-..
T Consensus 37 ~~Ilivdd~~~~~~~l~~~L~~~g~--~v~~~~~~~~~al~~l~~~---~~~~dliilD~~l~~~~g~~~~~~lr~~~~~ 111 (157)
T 3hzh_A 37 FNVLIVDDSVFTVKQLTQIFTSEGF--NIIDTAADGEEAVIKYKNH---YPNIDIVTLXITMPKMDGITCLSNIMEFDKN 111 (157)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHH---GGGCCEEEECSSCSSSCHHHHHHHHHHHCTT
T ss_pred eEEEEEeCCHHHHHHHHHHHHhCCC--eEEEEECCHHHHHHHHHhc---CCCCCEEEEeccCCCccHHHHHHHHHhhCCC
Confidence 3899999999999999999988775 3432566666666655321 127999999976 23445666666544333
Q ss_pred CeEEEE
Q 025824 183 GGVIGY 188 (247)
Q Consensus 183 gG~lv~ 188 (247)
--+|++
T Consensus 112 ~~ii~l 117 (157)
T 3hzh_A 112 ARVIMI 117 (157)
T ss_dssp CCEEEE
T ss_pred CcEEEE
Confidence 335554
No 428
>3t8y_A CHEB, chemotaxis response regulator protein-glutamate methylesterase; CHEA, hydrolase; 1.90A {Thermotoga maritima}
Probab=88.23 E-value=1.8 Score=31.85 Aligned_cols=93 Identities=14% Similarity=-0.035 Sum_probs=50.2
Q ss_pred cccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCceeEEEEcCC--c
Q 025824 89 YTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDFIFVDAD--K 166 (247)
Q Consensus 89 g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~fD~v~id~~--~ 166 (247)
|+++.+.....-.....+|..+|-++......+..+...+. ..+.....+..+.+..+. ...+|+|++|.. .
T Consensus 10 ~~~~~~~~~~~M~~~~~~ILivdd~~~~~~~l~~~L~~~~~-~~~v~~~~~~~~al~~l~-----~~~~dlvilD~~l~~ 83 (164)
T 3t8y_A 10 HSSGLVPRGSHMTDRVIRVLVVDDSAFMRMVLKDIIDSQPD-MKVVGFAKDGLEAVEKAI-----ELKPDVITMDIEMPN 83 (164)
T ss_dssp --------------CCEEEEEECSCHHHHHHHHHHHHTSTT-EEEEEEESSHHHHHHHHH-----HHCCSEEEECSSCSS
T ss_pred ccCCcccCccccccCccEEEEEcCCHHHHHHHHHHHhcCCC-eEEEEecCCHHHHHHHhc-----cCCCCEEEEeCCCCC
Confidence 44444444443333346899999999998888888887642 112223556666665553 357999999976 2
Q ss_pred cchHHHHHHHHhcCCCCeEEEE
Q 025824 167 DNYLNYHKRLIELVKVGGVIGY 188 (247)
Q Consensus 167 ~~~~~~l~~~~~~L~~gG~lv~ 188 (247)
.+-.+.++.+... .+--+|++
T Consensus 84 ~~g~~l~~~lr~~-~~~~ii~~ 104 (164)
T 3t8y_A 84 LNGIEALKLIMKK-APTRVIMV 104 (164)
T ss_dssp SCHHHHHHHHHHH-SCCEEEEE
T ss_pred CCHHHHHHHHHhc-CCceEEEE
Confidence 3345556655443 33445554
No 429
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=88.21 E-value=0.85 Score=38.15 Aligned_cols=95 Identities=11% Similarity=0.034 Sum_probs=58.2
Q ss_pred HhhcCCCEEEEEc--ccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhc
Q 025824 75 LKLVNAKNTMEIG--VYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEK 152 (247)
Q Consensus 75 ~~~~~~~~vLEiG--~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~ 152 (247)
....+..+||-+| .+.|..++.+++.. +++|++++ +++..+. +++.|.. .++..+..+.+...
T Consensus 148 ~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~--Ga~vi~~~-~~~~~~~----~~~lGa~---~~i~~~~~~~~~~~----- 212 (321)
T 3tqh_A 148 AEVKQGDVVLIHAGAGGVGHLAIQLAKQK--GTTVITTA-SKRNHAF----LKALGAE---QCINYHEEDFLLAI----- 212 (321)
T ss_dssp TTCCTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEE-CHHHHHH----HHHHTCS---EEEETTTSCHHHHC-----
T ss_pred cCCCCCCEEEEEcCCcHHHHHHHHHHHHc--CCEEEEEe-ccchHHH----HHHcCCC---EEEeCCCcchhhhh-----
Confidence 3445678999986 34677888888876 56899887 4443444 4456653 22222222212221
Q ss_pred CCCceeEEEEcCCccchHHHHHHHHhcCCCCeEEEEe
Q 025824 153 NHGSFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYD 189 (247)
Q Consensus 153 ~~~~fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv~d 189 (247)
...+|+||-.... ..+..+.+.|+++|.++.-
T Consensus 213 -~~g~D~v~d~~g~----~~~~~~~~~l~~~G~iv~~ 244 (321)
T 3tqh_A 213 -STPVDAVIDLVGG----DVGIQSIDCLKETGCIVSV 244 (321)
T ss_dssp -CSCEEEEEESSCH----HHHHHHGGGEEEEEEEEEC
T ss_pred -ccCCCEEEECCCc----HHHHHHHHhccCCCEEEEe
Confidence 3579988743321 2337788999999999864
No 430
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=87.96 E-value=4.4 Score=35.88 Aligned_cols=112 Identities=15% Similarity=0.083 Sum_probs=70.3
Q ss_pred HHHHHHHHHHHhh-cCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhh
Q 025824 65 ADEGQFLNMLLKL-VNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPV 143 (247)
Q Consensus 65 ~~~~~~l~~l~~~-~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~ 143 (247)
....+++..+-.. .+.++|+=+| .|..+..+|+.+....++..+|.+++.++...+.+ ++..+++||+.+.
T Consensus 219 ~~i~~~~~~~g~~~~~~~~v~I~G--gG~ig~~lA~~L~~~~~v~iIE~d~~r~~~la~~l------~~~~Vi~GD~td~ 290 (461)
T 4g65_A 219 NHIRSVMSELQRLEKPYRRIMIVG--GGNIGASLAKRLEQTYSVKLIERNLQRAEKLSEEL------ENTIVFCGDAADQ 290 (461)
T ss_dssp TTHHHHHHHTTGGGSCCCEEEEEC--CSHHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHC------TTSEEEESCTTCH
T ss_pred chHHHHHHhhccccccccEEEEEc--chHHHHHHHHHhhhcCceEEEecCHHHHHHHHHHC------CCceEEeccccch
Confidence 3344555544332 3457888877 67788888988877789999999998776665543 3578999999763
Q ss_pred hHHHHhhhcCCCceeEEEEcCCccchHHHHHHHHhcCCCCeEEE
Q 025824 144 LDLLIQDEKNHGSFDFIFVDADKDNYLNYHKRLIELVKVGGVIG 187 (247)
Q Consensus 144 l~~l~~~~~~~~~fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv 187 (247)
.-|..++ -+..|+++.-.......-....+.+.+...=++.
T Consensus 291 -~~L~ee~--i~~~D~~ia~T~~De~Ni~~~llAk~~gv~kvIa 331 (461)
T 4g65_A 291 -ELLTEEN--IDQVDVFIALTNEDETNIMSAMLAKRMGAKKVMV 331 (461)
T ss_dssp -HHHHHTT--GGGCSEEEECCSCHHHHHHHHHHHHHTTCSEEEE
T ss_pred -hhHhhcC--chhhcEEEEcccCcHHHHHHHHHHHHcCCccccc
Confidence 2232222 4689988875553333333344444454443333
No 431
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=87.93 E-value=4.7 Score=32.27 Aligned_cols=82 Identities=18% Similarity=0.188 Sum_probs=51.3
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhh--hHHHHhhh-cC
Q 025824 78 VNAKNTMEIGVYTGYSLLATALALP-DDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPV--LDLLIQDE-KN 153 (247)
Q Consensus 78 ~~~~~vLEiG~g~G~st~~la~~~~-~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~--l~~l~~~~-~~ 153 (247)
.+.+++|-.|++ |..+..+++.+. .+.+|+.++.+++.++...+.+ + .++.++..|..+. +..+.++- ..
T Consensus 6 l~gk~~lVTGas-~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~--~~~~~~~~Dv~~~~~v~~~~~~~~~~ 79 (255)
T 4eso_A 6 YQGKKAIVIGGT-HGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF---G--PRVHALRSDIADLNEIAVLGAAAGQT 79 (255)
T ss_dssp TTTCEEEEETCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---G--GGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---C--CcceEEEccCCCHHHHHHHHHHHHHH
Confidence 356889999954 556666665542 3679999999987765554443 2 3688888887652 22221100 01
Q ss_pred CCceeEEEEcCC
Q 025824 154 HGSFDFIFVDAD 165 (247)
Q Consensus 154 ~~~fD~v~id~~ 165 (247)
.+.+|+++..+.
T Consensus 80 ~g~id~lv~nAg 91 (255)
T 4eso_A 80 LGAIDLLHINAG 91 (255)
T ss_dssp HSSEEEEEECCC
T ss_pred hCCCCEEEECCC
Confidence 258999987653
No 432
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=87.75 E-value=10 Score=31.01 Aligned_cols=85 Identities=14% Similarity=0.137 Sum_probs=50.8
Q ss_pred cCCCEEEEEccccc-HHHHHHHhhC-CCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhh--hHHHHhhh-c
Q 025824 78 VNAKNTMEIGVYTG-YSLLATALAL-PDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPV--LDLLIQDE-K 152 (247)
Q Consensus 78 ~~~~~vLEiG~g~G-~st~~la~~~-~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~--l~~l~~~~-~ 152 (247)
...+++|-.|.+.| ..+..+++.+ ..+.+|+.++.+++..+.+.+.....+ ++.++..|..+. +..+.++- .
T Consensus 29 l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~Dv~d~~~v~~~~~~~~~ 105 (293)
T 3grk_A 29 LQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELG---AFVAGHCDVADAASIDAVFETLEK 105 (293)
T ss_dssp TTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHT---CEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC---CceEEECCCCCHHHHHHHHHHHHH
Confidence 46788999996532 1333344332 236799999999766566665555543 578888887642 22221110 0
Q ss_pred CCCceeEEEEcCC
Q 025824 153 NHGSFDFIFVDAD 165 (247)
Q Consensus 153 ~~~~fD~v~id~~ 165 (247)
..+.+|+++..+.
T Consensus 106 ~~g~iD~lVnnAG 118 (293)
T 3grk_A 106 KWGKLDFLVHAIG 118 (293)
T ss_dssp HTSCCSEEEECCC
T ss_pred hcCCCCEEEECCc
Confidence 1357999987654
No 433
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=87.36 E-value=4.9 Score=28.30 Aligned_cols=79 Identities=16% Similarity=0.167 Sum_probs=51.3
Q ss_pred CEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCceeEEEEcCC--ccchHHHHHHHHhcCCC
Q 025824 105 GKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDFIFVDAD--KDNYLNYHKRLIELVKV 182 (247)
Q Consensus 105 ~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~fD~v~id~~--~~~~~~~l~~~~~~L~~ 182 (247)
.+|..+|-++......+..+...|. .+. ...+..+.+..+.. ....+|+|++|.. ..+-..+++.+.+.-..
T Consensus 4 ~~ilivdd~~~~~~~l~~~l~~~g~--~v~-~~~~~~~a~~~~~~---~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~ 77 (143)
T 3jte_A 4 AKILVIDDESTILQNIKFLLEIDGN--EVL-TASSSTEGLRIFTE---NCNSIDVVITDMKMPKLSGMDILREIKKITPH 77 (143)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTC--EEE-EESSHHHHHHHHHH---TTTTCCEEEEESCCSSSCHHHHHHHHHHHCTT
T ss_pred CEEEEEcCCHHHHHHHHHHHHhCCc--eEE-EeCCHHHHHHHHHh---CCCCCCEEEEeCCCCCCcHHHHHHHHHHhCCC
Confidence 5899999999999999999988774 232 44555555555421 0358999999976 23345666666654333
Q ss_pred CeEEEEe
Q 025824 183 GGVIGYD 189 (247)
Q Consensus 183 gG~lv~d 189 (247)
--+|++.
T Consensus 78 ~~ii~ls 84 (143)
T 3jte_A 78 MAVIILT 84 (143)
T ss_dssp CEEEEEE
T ss_pred CeEEEEE
Confidence 3444443
No 434
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=87.27 E-value=1.5 Score=37.99 Aligned_cols=103 Identities=21% Similarity=0.181 Sum_probs=60.1
Q ss_pred CCCEEEEEccc-ccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEE---------ecc--------
Q 025824 79 NAKNTMEIGVY-TGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFRE---------GPA-------- 140 (247)
Q Consensus 79 ~~~~vLEiG~g-~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~---------gd~-------- 140 (247)
++.+|+-+|+| .|..+..++..+ +.+|+.+|.+++..+.+++ .|. +++. +.+
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~l--Ga~V~v~D~~~~~l~~~~~----lGa----~~~~l~~~~~~~~gya~~~~~~~~ 252 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRL--GAKTTGYDVRPEVAEQVRS----VGA----QWLDLGIDAAGEGGYARELSEAER 252 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHH--TCEEEEECSSGGGHHHHHH----TTC----EECCCC-------------CHHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH----cCC----eEEeccccccccccchhhhhHHHH
Confidence 67899999987 455555566665 4799999999997776654 332 1111 001
Q ss_pred ---hhhhHHHHhhhcCCCceeEEEEcCC--ccchHH-HHHHHHhcCCCCeEEEEecccccccc
Q 025824 141 ---LPVLDLLIQDEKNHGSFDFIFVDAD--KDNYLN-YHKRLIELVKVGGVIGYDNTLWNGSV 197 (247)
Q Consensus 141 ---~~~l~~l~~~~~~~~~fD~v~id~~--~~~~~~-~l~~~~~~L~~gG~lv~d~~~~~g~~ 197 (247)
.+.+.+. -...|+|+.... ....+. +-+...+.+|||++|+--.+-..|.+
T Consensus 253 ~~~~~~l~e~------l~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA~d~GG~~ 309 (381)
T 3p2y_A 253 AQQQQALEDA------ITKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLAGETGGNC 309 (381)
T ss_dssp HHHHHHHHHH------HTTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGGTCSB
T ss_pred hhhHHHHHHH------HhcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEeCCCCCcc
Confidence 1122222 267899986431 111111 23567788999988875444444443
No 435
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=87.23 E-value=2.7 Score=29.60 Aligned_cols=77 Identities=10% Similarity=-0.016 Sum_probs=50.3
Q ss_pred CCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCceeEEEEcCCcc----chHHHHHHHHhc
Q 025824 104 DGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDFIFVDADKD----NYLNYHKRLIEL 179 (247)
Q Consensus 104 ~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~fD~v~id~~~~----~~~~~l~~~~~~ 179 (247)
..+|..+|-++......+..+...|+ .+. ...+..+.+..+ ...++|+|++|.... +-.+.++.+.+.
T Consensus 6 ~~~ilivdd~~~~~~~l~~~L~~~g~--~v~-~~~~~~~a~~~l-----~~~~~dlvi~D~~l~~~~~~g~~~~~~l~~~ 77 (136)
T 3kto_A 6 HPIIYLVDHQKDARAALSKLLSPLDV--TIQ-CFASAESFMRQQ-----ISDDAIGMIIEAHLEDKKDSGIELLETLVKR 77 (136)
T ss_dssp -CEEEEECSCHHHHHHHHHHHTTSSS--EEE-EESSHHHHTTSC-----CCTTEEEEEEETTGGGBTTHHHHHHHHHHHT
T ss_pred CCeEEEEcCCHHHHHHHHHHHHHCCc--EEE-EeCCHHHHHHHH-----hccCCCEEEEeCcCCCCCccHHHHHHHHHhC
Confidence 45899999999998888888887765 333 445555555544 246799999998732 345566666554
Q ss_pred CCCCeEEEE
Q 025824 180 VKVGGVIGY 188 (247)
Q Consensus 180 L~~gG~lv~ 188 (247)
-..--+|++
T Consensus 78 ~~~~~ii~~ 86 (136)
T 3kto_A 78 GFHLPTIVM 86 (136)
T ss_dssp TCCCCEEEE
T ss_pred CCCCCEEEE
Confidence 322344544
No 436
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=87.22 E-value=3 Score=33.66 Aligned_cols=78 Identities=14% Similarity=0.085 Sum_probs=46.0
Q ss_pred CCEEEEEcccccHHHHHHHhhCC--CCCEEEEEeCCc-------------------chHHHHHHHHHHcCCCCcEEEEEe
Q 025824 80 AKNTMEIGVYTGYSLLATALALP--DDGKILAMDINR-------------------ENYELGLPVIQKAGVAHKIDFREG 138 (247)
Q Consensus 80 ~~~vLEiG~g~G~st~~la~~~~--~~~~v~~iD~~~-------------------~~~~~a~~~~~~~g~~~~i~~~~g 138 (247)
..+|+-+|+| ..+..++..+. .-++++.+|.+. ..++.+.+.+...+-.-+++.+..
T Consensus 31 ~~~VlVvG~G--g~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~ 108 (249)
T 1jw9_B 31 DSRVLIVGLG--GLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNA 108 (249)
T ss_dssp HCEEEEECCS--HHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECS
T ss_pred CCeEEEEeeC--HHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEec
Confidence 4689999986 33333332221 136999999997 667777777776543234555554
Q ss_pred cchh-hhHHHHhhhcCCCceeEEEEcCC
Q 025824 139 PALP-VLDLLIQDEKNHGSFDFIFVDAD 165 (247)
Q Consensus 139 d~~~-~l~~l~~~~~~~~~fD~v~id~~ 165 (247)
+..+ .+..+ -..+|+|+...+
T Consensus 109 ~~~~~~~~~~------~~~~DvVi~~~d 130 (249)
T 1jw9_B 109 LLDDAELAAL------IAEHDLVLDCTD 130 (249)
T ss_dssp CCCHHHHHHH------HHTSSEEEECCS
T ss_pred cCCHhHHHHH------HhCCCEEEEeCC
Confidence 4432 22222 247899986554
No 437
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=87.10 E-value=3.7 Score=29.51 Aligned_cols=78 Identities=14% Similarity=0.063 Sum_probs=52.3
Q ss_pred CCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCceeEEEEcCC--ccchHHHHHHHHhcCC
Q 025824 104 DGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDFIFVDAD--KDNYLNYHKRLIELVK 181 (247)
Q Consensus 104 ~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~fD~v~id~~--~~~~~~~l~~~~~~L~ 181 (247)
..+|..+|-++......+..+...|. .+. ...+..+.+..+. ...+|+|++|.. ..+-.++++.+...-.
T Consensus 14 ~~~ILivdd~~~~~~~l~~~L~~~g~--~v~-~~~~~~~a~~~l~-----~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~ 85 (153)
T 3hv2_A 14 RPEILLVDSQEVILQRLQQLLSPLPY--TLH-FARDATQALQLLA-----SREVDLVISAAHLPQMDGPTLLARIHQQYP 85 (153)
T ss_dssp CCEEEEECSCHHHHHHHHHHHTTSSC--EEE-EESSHHHHHHHHH-----HSCCSEEEEESCCSSSCHHHHHHHHHHHCT
T ss_pred CceEEEECCCHHHHHHHHHHhcccCc--EEE-EECCHHHHHHHHH-----cCCCCEEEEeCCCCcCcHHHHHHHHHhHCC
Confidence 46899999999999988998887764 233 4556666666553 357999999976 2344566666655333
Q ss_pred CCeEEEEe
Q 025824 182 VGGVIGYD 189 (247)
Q Consensus 182 ~gG~lv~d 189 (247)
.--+|++.
T Consensus 86 ~~~ii~~s 93 (153)
T 3hv2_A 86 STTRILLT 93 (153)
T ss_dssp TSEEEEEC
T ss_pred CCeEEEEE
Confidence 33445443
No 438
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=86.98 E-value=5.5 Score=27.53 Aligned_cols=77 Identities=12% Similarity=-0.041 Sum_probs=51.3
Q ss_pred CCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCceeEEEEcCCc--cchHHHHHHHHhcCC
Q 025824 104 DGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDFIFVDADK--DNYLNYHKRLIELVK 181 (247)
Q Consensus 104 ~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~fD~v~id~~~--~~~~~~l~~~~~~L~ 181 (247)
..+|..+|-++......++.+...|. .+. ...+..+.+..+. ..++|+|++|..- .+-.+.++.+.+.-.
T Consensus 6 ~~~ilivdd~~~~~~~l~~~L~~~g~--~v~-~~~~~~~a~~~l~-----~~~~dlii~d~~l~~~~g~~~~~~l~~~~~ 77 (132)
T 3lte_A 6 SKRILVVDDDQAMAAAIERVLKRDHW--QVE-IAHNGFDAGIKLS-----TFEPAIMTLDLSMPKLDGLDVIRSLRQNKV 77 (132)
T ss_dssp -CEEEEECSCHHHHHHHHHHHHHTTC--EEE-EESSHHHHHHHHH-----HTCCSEEEEESCBTTBCHHHHHHHHHTTTC
T ss_pred CccEEEEECCHHHHHHHHHHHHHCCc--EEE-EeCCHHHHHHHHH-----hcCCCEEEEecCCCCCCHHHHHHHHHhcCc
Confidence 46899999999999999999988765 333 4556666665553 3579999999762 334566666654332
Q ss_pred -CCeEEEE
Q 025824 182 -VGGVIGY 188 (247)
Q Consensus 182 -~gG~lv~ 188 (247)
+.-.|++
T Consensus 78 ~~~~~ii~ 85 (132)
T 3lte_A 78 ANQPKILV 85 (132)
T ss_dssp SSCCEEEE
T ss_pred cCCCeEEE
Confidence 3444443
No 439
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=86.91 E-value=6.2 Score=27.64 Aligned_cols=77 Identities=14% Similarity=0.195 Sum_probs=51.7
Q ss_pred CCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCceeEEEEcCCc--cchHHHHHHHHhc-C
Q 025824 104 DGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDFIFVDADK--DNYLNYHKRLIEL-V 180 (247)
Q Consensus 104 ~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~fD~v~id~~~--~~~~~~l~~~~~~-L 180 (247)
..+|..+|-++......+..+...|+ ++. ...+..+.+..+. ...+|+|++|... .+-.+.++.+.+. .
T Consensus 7 ~~~iLivdd~~~~~~~l~~~L~~~g~--~v~-~~~~~~~a~~~l~-----~~~~dlii~d~~l~~~~g~~~~~~l~~~~~ 78 (142)
T 3cg4_A 7 KGDVMIVDDDAHVRIAVKTILSDAGF--HII-SADSGGQCIDLLK-----KGFSGVVLLDIMMPGMDGWDTIRAILDNSL 78 (142)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHHTTC--EEE-EESSHHHHHHHHH-----TCCCEEEEEESCCSSSCHHHHHHHHHHTTC
T ss_pred CCeEEEEcCCHHHHHHHHHHHHHCCe--EEE-EeCCHHHHHHHHH-----hcCCCEEEEeCCCCCCCHHHHHHHHHhhcc
Confidence 56899999999999999999988775 233 4455556665553 4679999999763 2345666666652 3
Q ss_pred CCCe-EEEE
Q 025824 181 KVGG-VIGY 188 (247)
Q Consensus 181 ~~gG-~lv~ 188 (247)
.+.. +|++
T Consensus 79 ~~~~pii~~ 87 (142)
T 3cg4_A 79 EQGIAIVML 87 (142)
T ss_dssp CTTEEEEEE
T ss_pred cCCCCEEEE
Confidence 3443 4444
No 440
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=86.91 E-value=5.9 Score=27.68 Aligned_cols=78 Identities=15% Similarity=0.046 Sum_probs=51.7
Q ss_pred CCEEEEEeCCcchHHHHHHHHHH-cCCCCcEEEEEecchhhhHHHHhhhcCCCceeEEEEcCCc--cchHHHHHHHHhc-
Q 025824 104 DGKILAMDINRENYELGLPVIQK-AGVAHKIDFREGPALPVLDLLIQDEKNHGSFDFIFVDADK--DNYLNYHKRLIEL- 179 (247)
Q Consensus 104 ~~~v~~iD~~~~~~~~a~~~~~~-~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~fD~v~id~~~--~~~~~~l~~~~~~- 179 (247)
..+|..+|-++......+..+.. .|. .+-....+..+.+..+. ...+|+|++|... .+-.+.++.+...
T Consensus 8 ~~~iLivdd~~~~~~~l~~~L~~~~~~--~~v~~~~~~~~a~~~l~-----~~~~dlii~d~~l~~~~g~~~~~~l~~~~ 80 (143)
T 3cnb_A 8 DFSILIIEDDKEFADMLTQFLENLFPY--AKIKIAYNPFDAGDLLH-----TVKPDVVMLDLMMVGMDGFSICHRIKSTP 80 (143)
T ss_dssp -CEEEEECSCHHHHHHHHHHHHHHCTT--CEEEEECSHHHHHHHHH-----HTCCSEEEEETTCTTSCHHHHHHHHHTST
T ss_pred CceEEEEECCHHHHHHHHHHHHhccCc--cEEEEECCHHHHHHHHH-----hcCCCEEEEecccCCCcHHHHHHHHHhCc
Confidence 46899999999999999999988 675 32334566666665553 3579999999762 2345666666652
Q ss_pred CCCC-eEEEE
Q 025824 180 VKVG-GVIGY 188 (247)
Q Consensus 180 L~~g-G~lv~ 188 (247)
..++ -+|++
T Consensus 81 ~~~~~~ii~~ 90 (143)
T 3cnb_A 81 ATANIIVIAM 90 (143)
T ss_dssp TTTTSEEEEE
T ss_pred cccCCcEEEE
Confidence 2344 44444
No 441
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=86.88 E-value=4.3 Score=33.84 Aligned_cols=86 Identities=10% Similarity=0.135 Sum_probs=57.7
Q ss_pred CCCEEEEEcccccHHHHHHHhhC-CCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhh--hHHHHhhh-cCC
Q 025824 79 NAKNTMEIGVYTGYSLLATALAL-PDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPV--LDLLIQDE-KNH 154 (247)
Q Consensus 79 ~~~~vLEiG~g~G~st~~la~~~-~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~--l~~l~~~~-~~~ 154 (247)
..++||-.|++ |..+..+++.+ ..+.+|+.++.+++.++.+.+.+...+...++.++..|..+. +..+...- ...
T Consensus 7 ~~k~vlVTGas-~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 85 (319)
T 3ioy_A 7 AGRTAFVTGGA-NGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARF 85 (319)
T ss_dssp TTCEEEEETTT-STHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEcCCc-hHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhC
Confidence 45789999965 55666666654 246799999999998887777777665444789999987652 22221100 013
Q ss_pred CceeEEEEcCC
Q 025824 155 GSFDFIFVDAD 165 (247)
Q Consensus 155 ~~fD~v~id~~ 165 (247)
+.+|+++..+.
T Consensus 86 g~id~lv~nAg 96 (319)
T 3ioy_A 86 GPVSILCNNAG 96 (319)
T ss_dssp CCEEEEEECCC
T ss_pred CCCCEEEECCC
Confidence 57999987754
No 442
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=86.83 E-value=2.7 Score=29.87 Aligned_cols=78 Identities=14% Similarity=0.175 Sum_probs=51.8
Q ss_pred CCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCceeEEEEcCCc--cchHHHHHHHHh--c
Q 025824 104 DGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDFIFVDADK--DNYLNYHKRLIE--L 179 (247)
Q Consensus 104 ~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~fD~v~id~~~--~~~~~~l~~~~~--~ 179 (247)
..+|..+|-++......+..+...|+ .+. ...+..+.+..+. ...+|+|++|... .+-.+.++.+.+ .
T Consensus 8 ~~~iLivd~~~~~~~~l~~~L~~~g~--~v~-~~~~~~~a~~~l~-----~~~~dlii~d~~l~~~~g~~~~~~l~~~~~ 79 (147)
T 2zay_A 8 WWRIMLVDTQLPALAASISALSQEGF--DII-QCGNAIEAVPVAV-----KTHPHLIITEANMPKISGMDLFNSLKKNPQ 79 (147)
T ss_dssp CEEEEEECTTGGGGHHHHHHHHHHTE--EEE-EESSHHHHHHHHH-----HHCCSEEEEESCCSSSCHHHHHHHHHTSTT
T ss_pred CceEEEEeCCHHHHHHHHHHHHHcCC--eEE-EeCCHHHHHHHHH-----cCCCCEEEEcCCCCCCCHHHHHHHHHcCcc
Confidence 46899999999999999999988765 333 4455555655543 3479999999762 334566666665 2
Q ss_pred CCCCeEEEEe
Q 025824 180 VKVGGVIGYD 189 (247)
Q Consensus 180 L~~gG~lv~d 189 (247)
...--+|++.
T Consensus 80 ~~~~pii~ls 89 (147)
T 2zay_A 80 TASIPVIALS 89 (147)
T ss_dssp TTTSCEEEEE
T ss_pred cCCCCEEEEe
Confidence 3333455543
No 443
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=86.72 E-value=5.2 Score=28.13 Aligned_cols=76 Identities=18% Similarity=0.231 Sum_probs=50.3
Q ss_pred CCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCceeEEEEcCCccc--hHHHHHHHHhcCC
Q 025824 104 DGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDFIFVDADKDN--YLNYHKRLIELVK 181 (247)
Q Consensus 104 ~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~fD~v~id~~~~~--~~~~l~~~~~~L~ 181 (247)
..+|..+|-++......+..+...|+ ++. ...+..+.+..+. ...+|+|++|. ... -.+.++.+.+...
T Consensus 4 ~~~iLivdd~~~~~~~l~~~L~~~g~--~v~-~~~~~~~a~~~l~-----~~~~dlvi~d~-~~~~~g~~~~~~l~~~~~ 74 (142)
T 2qxy_A 4 TPTVMVVDESRITFLAVKNALEKDGF--NVI-WAKNEQEAFTFLR-----REKIDLVFVDV-FEGEESLNLIRRIREEFP 74 (142)
T ss_dssp CCEEEEECSCHHHHHHHHHHHGGGTC--EEE-EESSHHHHHHHHT-----TSCCSEEEEEC-TTTHHHHHHHHHHHHHCT
T ss_pred CCeEEEEeCCHHHHHHHHHHHHhCCC--EEE-EECCHHHHHHHHh-----ccCCCEEEEeC-CCCCcHHHHHHHHHHHCC
Confidence 45899999999999888999988775 343 4556666666552 46899999997 432 2344555554433
Q ss_pred CCeEEEE
Q 025824 182 VGGVIGY 188 (247)
Q Consensus 182 ~gG~lv~ 188 (247)
.--+|++
T Consensus 75 ~~pii~l 81 (142)
T 2qxy_A 75 DTKVAVL 81 (142)
T ss_dssp TCEEEEE
T ss_pred CCCEEEE
Confidence 3345554
No 444
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=86.72 E-value=3.9 Score=34.83 Aligned_cols=81 Identities=19% Similarity=0.058 Sum_probs=51.3
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchh--hhHHHHhhhcCCCc
Q 025824 79 NAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALP--VLDLLIQDEKNHGS 156 (247)
Q Consensus 79 ~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~--~l~~l~~~~~~~~~ 156 (247)
+..+||-+|| |..+..+++.+.....|+..|.+.+.++.++ +.+..+..|+.+ .+..+. ..
T Consensus 15 ~~mkilvlGa--G~vG~~~~~~L~~~~~v~~~~~~~~~~~~~~---------~~~~~~~~d~~d~~~l~~~~------~~ 77 (365)
T 3abi_A 15 RHMKVLILGA--GNIGRAIAWDLKDEFDVYIGDVNNENLEKVK---------EFATPLKVDASNFDKLVEVM------KE 77 (365)
T ss_dssp -CCEEEEECC--SHHHHHHHHHHTTTSEEEEEESCHHHHHHHT---------TTSEEEECCTTCHHHHHHHH------TT
T ss_pred CccEEEEECC--CHHHHHHHHHHhcCCCeEEEEcCHHHHHHHh---------ccCCcEEEecCCHHHHHHHH------hC
Confidence 3468999997 7777777777766789999999987665442 234555566643 334432 56
Q ss_pred eeEEEEcCCccchHHHHHHH
Q 025824 157 FDFIFVDADKDNYLNYHKRL 176 (247)
Q Consensus 157 fD~v~id~~~~~~~~~l~~~ 176 (247)
.|+|+.-.+........+.|
T Consensus 78 ~DvVi~~~p~~~~~~v~~~~ 97 (365)
T 3abi_A 78 FELVIGALPGFLGFKSIKAA 97 (365)
T ss_dssp CSEEEECCCGGGHHHHHHHH
T ss_pred CCEEEEecCCcccchHHHHH
Confidence 89888765543333444444
No 445
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=86.55 E-value=3.4 Score=29.66 Aligned_cols=78 Identities=10% Similarity=0.002 Sum_probs=52.1
Q ss_pred CCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCceeEEEEcCC--ccchHHHHHHHHhcCC
Q 025824 104 DGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDFIFVDAD--KDNYLNYHKRLIELVK 181 (247)
Q Consensus 104 ~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~fD~v~id~~--~~~~~~~l~~~~~~L~ 181 (247)
..+|..+|-++...+..+..+...|.. .+.....+..+.+..+. ...+|+|++|.. ..+-.+.++.+.+. .
T Consensus 15 ~~~iLivdd~~~~~~~l~~~L~~~~~~-~~v~~~~~~~~a~~~l~-----~~~~dlii~d~~l~~~~g~~~~~~l~~~-~ 87 (152)
T 3eul_A 15 KVRVVVGDDHPLFREGVVRALSLSGSV-NVVGEADDGAAALELIK-----AHLPDVALLDYRMPGMDGAQVAAAVRSY-E 87 (152)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHSSE-EEEEEESSHHHHHHHHH-----HHCCSEEEEETTCSSSCHHHHHHHHHHT-T
T ss_pred eEEEEEEcCCHHHHHHHHHHHhhCCCe-EEEEEeCCHHHHHHHHH-----hcCCCEEEEeCCCCCCCHHHHHHHHHhc-C
Confidence 568999999999999999999887631 12224566666665553 357999999976 33445666666654 3
Q ss_pred CC-eEEEE
Q 025824 182 VG-GVIGY 188 (247)
Q Consensus 182 ~g-G~lv~ 188 (247)
|. -+|++
T Consensus 88 ~~~~ii~~ 95 (152)
T 3eul_A 88 LPTRVLLI 95 (152)
T ss_dssp CSCEEEEE
T ss_pred CCCeEEEE
Confidence 44 34444
No 446
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=86.37 E-value=4.6 Score=32.66 Aligned_cols=86 Identities=16% Similarity=0.053 Sum_probs=56.3
Q ss_pred CCCEEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhh--hHHHHhhh-cCC
Q 025824 79 NAKNTMEIGVYTGYSLLATALALP-DDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPV--LDLLIQDE-KNH 154 (247)
Q Consensus 79 ~~~~vLEiG~g~G~st~~la~~~~-~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~--l~~l~~~~-~~~ 154 (247)
+.+++|-.|+ +|..+..+++.+. .+.+|+.++.+++..+...+.+...+...++.++.+|..+. +..+.++- ...
T Consensus 31 ~~k~vlVTGa-sggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 109 (279)
T 1xg5_A 31 RDRLALVTGA-SGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH 109 (279)
T ss_dssp TTCEEEEEST-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECC-CchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhC
Confidence 5678999884 5666777666542 36799999999887776666677666555788888887642 22221100 002
Q ss_pred CceeEEEEcCC
Q 025824 155 GSFDFIFVDAD 165 (247)
Q Consensus 155 ~~fD~v~id~~ 165 (247)
+.+|+|+..+.
T Consensus 110 g~iD~vi~~Ag 120 (279)
T 1xg5_A 110 SGVDICINNAG 120 (279)
T ss_dssp CCCSEEEECCC
T ss_pred CCCCEEEECCC
Confidence 47899987653
No 447
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=86.37 E-value=0.61 Score=37.52 Aligned_cols=87 Identities=18% Similarity=0.171 Sum_probs=51.5
Q ss_pred CEEEEEcccccHHHHHHHhhCCC-CC----EEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCC
Q 025824 81 KNTMEIGVYTGYSLLATALALPD-DG----KILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHG 155 (247)
Q Consensus 81 ~~vLEiG~g~G~st~~la~~~~~-~~----~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~ 155 (247)
.+|.=||+| ..+..++..+.. +. +|+.+|.+++.++...+. .|. +. ..+..+.+ .
T Consensus 3 ~~i~iIG~G--~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~---~g~----~~-~~~~~e~~----------~ 62 (247)
T 3gt0_A 3 KQIGFIGCG--NMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEK---YGL----TT-TTDNNEVA----------K 62 (247)
T ss_dssp CCEEEECCS--HHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHH---HCC----EE-CSCHHHHH----------H
T ss_pred CeEEEECcc--HHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHH---hCC----EE-eCChHHHH----------H
Confidence 467778854 455444444321 22 899999998866554332 242 21 12222221 3
Q ss_pred ceeEEEEcCCccchHHHHHHHHhcCCCCeEEE
Q 025824 156 SFDFIFVDADKDNYLNYHKRLIELVKVGGVIG 187 (247)
Q Consensus 156 ~fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv 187 (247)
..|+||+-.........++.+.+.+++|.+++
T Consensus 63 ~aDvVilav~~~~~~~v~~~l~~~l~~~~~vv 94 (247)
T 3gt0_A 63 NADILILSIKPDLYASIINEIKEIIKNDAIIV 94 (247)
T ss_dssp HCSEEEECSCTTTHHHHC---CCSSCTTCEEE
T ss_pred hCCEEEEEeCHHHHHHHHHHHHhhcCCCCEEE
Confidence 57999988776667777888888888888776
No 448
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=86.35 E-value=4.5 Score=28.30 Aligned_cols=77 Identities=12% Similarity=0.096 Sum_probs=50.8
Q ss_pred CCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCceeEEEEcCCcc-------chHHHHHHH
Q 025824 104 DGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDFIFVDADKD-------NYLNYHKRL 176 (247)
Q Consensus 104 ~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~fD~v~id~~~~-------~~~~~l~~~ 176 (247)
..+|..+|-++......+..+...|. .+. ...+..+.+..+. ...+|+|++|.... +-...++.+
T Consensus 3 ~~~ilivdd~~~~~~~l~~~L~~~g~--~v~-~~~~~~~a~~~l~-----~~~~dlvi~d~~~~~~~~~~~~g~~~~~~l 74 (140)
T 2qr3_A 3 LGTIIIVDDNKGVLTAVQLLLKNHFS--KVI-TLSSPVSLSTVLR-----EENPEVVLLDMNFTSGINNGNEGLFWLHEI 74 (140)
T ss_dssp CCEEEEECSCHHHHHHHHHHHTTTSS--EEE-EECCHHHHHHHHH-----HSCEEEEEEETTTTC-----CCHHHHHHHH
T ss_pred CceEEEEeCCHHHHHHHHHHHHhCCc--EEE-EeCCHHHHHHHHH-----cCCCCEEEEeCCcCCCCCCCccHHHHHHHH
Confidence 35899999999988888888887665 333 4455556655553 35799999997532 345566666
Q ss_pred HhcCCCCeEEEE
Q 025824 177 IELVKVGGVIGY 188 (247)
Q Consensus 177 ~~~L~~gG~lv~ 188 (247)
.+....--+|++
T Consensus 75 ~~~~~~~~ii~l 86 (140)
T 2qr3_A 75 KRQYRDLPVVLF 86 (140)
T ss_dssp HHHCTTCCEEEE
T ss_pred HhhCcCCCEEEE
Confidence 654333345554
No 449
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=86.32 E-value=6.2 Score=28.14 Aligned_cols=77 Identities=12% Similarity=0.012 Sum_probs=50.4
Q ss_pred CEEEEEeCCcchHHHHHHHHHHcCCCCcEEE-EEecchhhhHHHHhhhcCCCceeEEEEcCC--ccchHHHHHHHHhcCC
Q 025824 105 GKILAMDINRENYELGLPVIQKAGVAHKIDF-REGPALPVLDLLIQDEKNHGSFDFIFVDAD--KDNYLNYHKRLIELVK 181 (247)
Q Consensus 105 ~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~-~~gd~~~~l~~l~~~~~~~~~fD~v~id~~--~~~~~~~l~~~~~~L~ 181 (247)
-+|..+|-++...+..+..+...+. ...+ ...+..+.+..+. ...+|+|++|.. ..+-.+.++.+.+.-.
T Consensus 21 ~~iLivdd~~~~~~~l~~~L~~~~~--~~~v~~~~~~~~al~~l~-----~~~~dlii~D~~l~~~~g~~~~~~l~~~~~ 93 (150)
T 4e7p_A 21 MKVLVAEDQSMLRDAMCQLLTLQPD--VESVLQAKNGQEAIQLLE-----KESVDIAILDVEMPVKTGLEVLEWIRSEKL 93 (150)
T ss_dssp EEEEEECSCHHHHHHHHHHHHTSTT--EEEEEEESSHHHHHHHHT-----TSCCSEEEECSSCSSSCHHHHHHHHHHTTC
T ss_pred cEEEEEcCCHHHHHHHHHHHHhCCC--cEEEEEECCHHHHHHHhh-----ccCCCEEEEeCCCCCCcHHHHHHHHHHhCC
Confidence 4899999999988888888887642 2333 3455666666552 567999999976 3344566666665433
Q ss_pred CCeEEEE
Q 025824 182 VGGVIGY 188 (247)
Q Consensus 182 ~gG~lv~ 188 (247)
.--+|++
T Consensus 94 ~~~ii~l 100 (150)
T 4e7p_A 94 ETKVVVV 100 (150)
T ss_dssp SCEEEEE
T ss_pred CCeEEEE
Confidence 3334444
No 450
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=86.31 E-value=1.3 Score=38.59 Aligned_cols=41 Identities=24% Similarity=0.227 Sum_probs=30.0
Q ss_pred CCCEEEEEccc-ccHHHHHHHhhCCCCCEEEEEeCCcchHHHHH
Q 025824 79 NAKNTMEIGVY-TGYSLLATALALPDDGKILAMDINRENYELGL 121 (247)
Q Consensus 79 ~~~~vLEiG~g-~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~ 121 (247)
++.+|+-+|+| .|..+..++..+ +.+|+.+|.+++..+.++
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~--Ga~V~v~D~~~~~~~~~~ 212 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANSL--GAIVRAFDTRPEVKEQVQ 212 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCGGGHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHH
Confidence 57899999976 344455566666 469999999998776653
No 451
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=86.30 E-value=1.4 Score=38.01 Aligned_cols=42 Identities=24% Similarity=0.268 Sum_probs=30.2
Q ss_pred CCCEEEEEccc-ccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHH
Q 025824 79 NAKNTMEIGVY-TGYSLLATALALPDDGKILAMDINRENYELGLP 122 (247)
Q Consensus 79 ~~~~vLEiG~g-~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~ 122 (247)
++.+|+-+|+| .|..+..++..+ +.+|+.+|.++...+.+++
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~--Ga~V~~~d~~~~~~~~~~~ 213 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRL--GAVVMATDVRAATKEQVES 213 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCSTTHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH
Confidence 57899999976 344445566665 4689999999987666543
No 452
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=86.27 E-value=3.7 Score=28.75 Aligned_cols=77 Identities=12% Similarity=-0.142 Sum_probs=52.5
Q ss_pred CCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCceeEEEEcCCc---cchHHHHHHHHhcC
Q 025824 104 DGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDFIFVDADK---DNYLNYHKRLIELV 180 (247)
Q Consensus 104 ~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~fD~v~id~~~---~~~~~~l~~~~~~L 180 (247)
..+|..+|-++......+..+...|+ .+.....+..+.+..+. ...+|+|++|... ....+.++.+...
T Consensus 9 ~~~iLivdd~~~~~~~l~~~L~~~g~--~v~~~~~~~~~a~~~~~-----~~~~dlii~d~~~~~~~~g~~~~~~l~~~- 80 (140)
T 3cg0_A 9 LPGVLIVEDGRLAAATLRIQLESLGY--DVLGVFDNGEEAVRCAP-----DLRPDIALVDIMLCGALDGVETAARLAAG- 80 (140)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHHHTC--EEEEEESSHHHHHHHHH-----HHCCSEEEEESSCCSSSCHHHHHHHHHHH-
T ss_pred CceEEEEECCHHHHHHHHHHHHHCCC--eeEEEECCHHHHHHHHH-----hCCCCEEEEecCCCCCCCHHHHHHHHHhC-
Confidence 46899999999999999999988775 34334566666665553 3469999999653 2445666766655
Q ss_pred CCCeEEEE
Q 025824 181 KVGGVIGY 188 (247)
Q Consensus 181 ~~gG~lv~ 188 (247)
..--+|++
T Consensus 81 ~~~~ii~l 88 (140)
T 3cg0_A 81 CNLPIIFI 88 (140)
T ss_dssp SCCCEEEE
T ss_pred CCCCEEEE
Confidence 33345554
No 453
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=86.27 E-value=1.9 Score=36.90 Aligned_cols=91 Identities=10% Similarity=0.032 Sum_probs=56.6
Q ss_pred CCCEEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCce
Q 025824 79 NAKNTMEIGVYTGYSLLATALALP-DDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSF 157 (247)
Q Consensus 79 ~~~~vLEiG~g~G~st~~la~~~~-~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~f 157 (247)
+..+|.=||+ |..+..++..+. .+.+|+++|.+++.++.+. ..|. .. ..+..+.+.. ....
T Consensus 21 ~~mkIgiIGl--G~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~----~~g~----~~-~~s~~e~~~~-------a~~~ 82 (358)
T 4e21_A 21 QSMQIGMIGL--GRMGADMVRRLRKGGHECVVYDLNVNAVQALE----REGI----AG-ARSIEEFCAK-------LVKP 82 (358)
T ss_dssp -CCEEEEECC--SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH----TTTC----BC-CSSHHHHHHH-------SCSS
T ss_pred cCCEEEEECc--hHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHH----HCCC----EE-eCCHHHHHhc-------CCCC
Confidence 3468888885 566666555542 2468999999988655433 2332 11 1222233221 2456
Q ss_pred eEEEEcCCccchHHHHHHHHhcCCCCeEEE
Q 025824 158 DFIFVDADKDNYLNYHKRLIELVKVGGVIG 187 (247)
Q Consensus 158 D~v~id~~~~~~~~~l~~~~~~L~~gG~lv 187 (247)
|+||+-.+.......++.+.+.|++|.+|+
T Consensus 83 DvVi~~vp~~~v~~vl~~l~~~l~~g~iiI 112 (358)
T 4e21_A 83 RVVWLMVPAAVVDSMLQRMTPLLAANDIVI 112 (358)
T ss_dssp CEEEECSCGGGHHHHHHHHGGGCCTTCEEE
T ss_pred CEEEEeCCHHHHHHHHHHHHhhCCCCCEEE
Confidence 999987765566777788888898887766
No 454
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=86.20 E-value=6.5 Score=30.25 Aligned_cols=69 Identities=13% Similarity=0.034 Sum_probs=47.1
Q ss_pred EEEEEcccccHHHHHHHhhC-CCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCceeEE
Q 025824 82 NTMEIGVYTGYSLLATALAL-PDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDFI 160 (247)
Q Consensus 82 ~vLEiG~g~G~st~~la~~~-~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~fD~v 160 (247)
+||-+| ++|..+..+++.+ ..+.+|++++.++...... ...+++++.+|..+.-... -..+|.|
T Consensus 2 kilVtG-atG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~--------~~~~~~~~~~D~~d~~~~~------~~~~d~v 66 (224)
T 3h2s_A 2 KIAVLG-ATGRAGSAIVAEARRRGHEVLAVVRDPQKAADR--------LGATVATLVKEPLVLTEAD------LDSVDAV 66 (224)
T ss_dssp EEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH--------TCTTSEEEECCGGGCCHHH------HTTCSEE
T ss_pred EEEEEc-CCCHHHHHHHHHHHHCCCEEEEEEecccccccc--------cCCCceEEecccccccHhh------cccCCEE
Confidence 578888 5788888877765 3367999999987643321 1246899999987643322 2568999
Q ss_pred EEcCC
Q 025824 161 FVDAD 165 (247)
Q Consensus 161 ~id~~ 165 (247)
|..+.
T Consensus 67 i~~ag 71 (224)
T 3h2s_A 67 VDALS 71 (224)
T ss_dssp EECCC
T ss_pred EECCc
Confidence 87654
No 455
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=86.19 E-value=2.2 Score=38.26 Aligned_cols=87 Identities=14% Similarity=0.178 Sum_probs=52.0
Q ss_pred cCCCEEEEEccc-ccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCc
Q 025824 78 VNAKNTMEIGVY-TGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGS 156 (247)
Q Consensus 78 ~~~~~vLEiG~g-~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~ 156 (247)
...++|+-+|+| .|......++.+ +.+|+++|.++...+.++ ..|. ++ .+.. .+ -..
T Consensus 272 l~GktV~IiG~G~IG~~~A~~lka~--Ga~Viv~d~~~~~~~~A~----~~Ga----~~--~~l~----e~------l~~ 329 (494)
T 3ce6_A 272 IGGKKVLICGYGDVGKGCAEAMKGQ--GARVSVTEIDPINALQAM----MEGF----DV--VTVE----EA------IGD 329 (494)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHH----HTTC----EE--CCHH----HH------GGG
T ss_pred CCcCEEEEEccCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHH----HcCC----EE--ecHH----HH------HhC
Confidence 457899999964 233333444444 469999999998765553 3454 22 2222 22 146
Q ss_pred eeEEEEcCCccchHHHHHHHHhcCCCCeEEEE
Q 025824 157 FDFIFVDADKDNYLNYHKRLIELVKVGGVIGY 188 (247)
Q Consensus 157 fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv~ 188 (247)
.|+|+......... -....+.+++||+++.
T Consensus 330 aDvVi~atgt~~~i--~~~~l~~mk~ggilvn 359 (494)
T 3ce6_A 330 ADIVVTATGNKDII--MLEHIKAMKDHAILGN 359 (494)
T ss_dssp CSEEEECSSSSCSB--CHHHHHHSCTTCEEEE
T ss_pred CCEEEECCCCHHHH--HHHHHHhcCCCcEEEE
Confidence 79888765432221 1245667899998874
No 456
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=86.15 E-value=2.1 Score=33.70 Aligned_cols=72 Identities=15% Similarity=0.048 Sum_probs=49.5
Q ss_pred CCCEEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCcchHHHHHHHHHHcCCCCcE-EEEEecchhhhHHHHhhhcCCCc
Q 025824 79 NAKNTMEIGVYTGYSLLATALALP-DDGKILAMDINRENYELGLPVIQKAGVAHKI-DFREGPALPVLDLLIQDEKNHGS 156 (247)
Q Consensus 79 ~~~~vLEiG~g~G~st~~la~~~~-~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i-~~~~gd~~~~l~~l~~~~~~~~~ 156 (247)
..++||-+| |+|..+..+++.+. .+.+|++++.+++..+.. .. .++ +++.+|..+.+... -+.
T Consensus 20 ~~~~ilVtG-atG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~----~~----~~~~~~~~~Dl~~~~~~~------~~~ 84 (236)
T 3e8x_A 20 QGMRVLVVG-ANGKVARYLLSELKNKGHEPVAMVRNEEQGPEL----RE----RGASDIVVANLEEDFSHA------FAS 84 (236)
T ss_dssp -CCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHH----HH----TTCSEEEECCTTSCCGGG------GTT
T ss_pred CCCeEEEEC-CCChHHHHHHHHHHhCCCeEEEEECChHHHHHH----Hh----CCCceEEEcccHHHHHHH------HcC
Confidence 567899998 56777777776652 367999999998865432 22 247 88899986433332 257
Q ss_pred eeEEEEcCC
Q 025824 157 FDFIFVDAD 165 (247)
Q Consensus 157 fD~v~id~~ 165 (247)
+|.||..+.
T Consensus 85 ~D~vi~~ag 93 (236)
T 3e8x_A 85 IDAVVFAAG 93 (236)
T ss_dssp CSEEEECCC
T ss_pred CCEEEECCC
Confidence 899987664
No 457
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=86.02 E-value=3.7 Score=34.16 Aligned_cols=61 Identities=11% Similarity=0.110 Sum_probs=39.7
Q ss_pred cCCCEEEEEccc-ccHHHH-HHHhhCCCCCEEEEEeCCc------------------chHHHHHHHHHHcCCCCcEEEEE
Q 025824 78 VNAKNTMEIGVY-TGYSLL-ATALALPDDGKILAMDINR------------------ENYELGLPVIQKAGVAHKIDFRE 137 (247)
Q Consensus 78 ~~~~~vLEiG~g-~G~st~-~la~~~~~~~~v~~iD~~~------------------~~~~~a~~~~~~~g~~~~i~~~~ 137 (247)
.+..+||-+||| .|.... .|+.+ + -++++.+|.+. ..++.+++.+...+-.-+++.+.
T Consensus 34 L~~~~VlVvGaGGlGs~va~~La~a-G-VG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~~ 111 (292)
T 3h8v_A 34 IRTFAVAIVGVGGVGSVTAEMLTRC-G-IGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVHN 111 (292)
T ss_dssp GGGCEEEEECCSHHHHHHHHHHHHH-T-CSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred HhCCeEEEECcCHHHHHHHHHHHHc-C-CCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEec
Confidence 356799999987 344333 34433 2 47999999876 56777888888766433555555
Q ss_pred ecc
Q 025824 138 GPA 140 (247)
Q Consensus 138 gd~ 140 (247)
.+.
T Consensus 112 ~~l 114 (292)
T 3h8v_A 112 YNI 114 (292)
T ss_dssp CCT
T ss_pred ccC
Confidence 444
No 458
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=85.94 E-value=5.5 Score=27.95 Aligned_cols=78 Identities=14% Similarity=0.084 Sum_probs=52.6
Q ss_pred CCEEEEEeCCcchHHHHHHHHHH-cCCCCcEEEEEecchhhhHHHHhhhcCC-CceeEEEEcCCcc---chHHHHHHHHh
Q 025824 104 DGKILAMDINRENYELGLPVIQK-AGVAHKIDFREGPALPVLDLLIQDEKNH-GSFDFIFVDADKD---NYLNYHKRLIE 178 (247)
Q Consensus 104 ~~~v~~iD~~~~~~~~a~~~~~~-~g~~~~i~~~~gd~~~~l~~l~~~~~~~-~~fD~v~id~~~~---~~~~~l~~~~~ 178 (247)
..+|..+|-++......+..+.. .|+ .+. ...+..+.+..+ .. ..+|+|++|..-. +-.++++.+..
T Consensus 4 ~~~ilivdd~~~~~~~l~~~L~~~~~~--~v~-~~~~~~~a~~~l-----~~~~~~dlvi~D~~l~~~~~g~~~~~~l~~ 75 (140)
T 3lua_A 4 DGTVLLIDYFEYEREKTKIIFDNIGEY--DFI-EVENLKKFYSIF-----KDLDSITLIIMDIAFPVEKEGLEVLSAIRN 75 (140)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHHHCCC--EEE-EECSHHHHHTTT-----TTCCCCSEEEECSCSSSHHHHHHHHHHHHH
T ss_pred CCeEEEEeCCHHHHHHHHHHHHhccCc--cEE-EECCHHHHHHHH-----hcCCCCcEEEEeCCCCCCCcHHHHHHHHHh
Confidence 45899999999999999999988 665 344 455666665554 24 6899999998643 33456666655
Q ss_pred --cCCCCeEEEEe
Q 025824 179 --LVKVGGVIGYD 189 (247)
Q Consensus 179 --~L~~gG~lv~d 189 (247)
....--+|++.
T Consensus 76 ~~~~~~~~ii~ls 88 (140)
T 3lua_A 76 NSRTANTPVIIAT 88 (140)
T ss_dssp SGGGTTCCEEEEE
T ss_pred CcccCCCCEEEEe
Confidence 33334455543
No 459
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=85.91 E-value=2.2 Score=37.32 Aligned_cols=42 Identities=24% Similarity=0.225 Sum_probs=32.0
Q ss_pred CCCEEEEEccc-ccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHH
Q 025824 79 NAKNTMEIGVY-TGYSLLATALALPDDGKILAMDINRENYELGLP 122 (247)
Q Consensus 79 ~~~~vLEiG~g-~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~ 122 (247)
++.+|+-+|+| .|..+..++..+ +++|+.+|.++...+.+++
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~l--Ga~V~v~D~~~~~l~~~~~ 231 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRL--GAVVSATDVRPAAKEQVAS 231 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSTTHHHHHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHH
Confidence 57899999987 455556666666 5799999999987666654
No 460
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=85.90 E-value=3 Score=34.79 Aligned_cols=80 Identities=14% Similarity=0.142 Sum_probs=52.4
Q ss_pred CCCEEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCcchHHHHHHHHHHcCCC---CcEEEEEecchhh--hHHHHhhhc
Q 025824 79 NAKNTMEIGVYTGYSLLATALALP-DDGKILAMDINRENYELGLPVIQKAGVA---HKIDFREGPALPV--LDLLIQDEK 152 (247)
Q Consensus 79 ~~~~vLEiG~g~G~st~~la~~~~-~~~~v~~iD~~~~~~~~a~~~~~~~g~~---~~i~~~~gd~~~~--l~~l~~~~~ 152 (247)
..++||-+| |+|+.+..+++.+- .+.+|++++.++.........+....-. .+++++.+|..+. +..+
T Consensus 24 ~~~~vlVtG-atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~----- 97 (351)
T 3ruf_A 24 SPKTWLITG-VAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQV----- 97 (351)
T ss_dssp SCCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHH-----
T ss_pred CCCeEEEEC-CCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHH-----
Confidence 568999998 67888888887653 3679999998765333222223321100 4689999998653 3333
Q ss_pred CCCceeEEEEcCC
Q 025824 153 NHGSFDFIFVDAD 165 (247)
Q Consensus 153 ~~~~fD~v~id~~ 165 (247)
-..+|.||.-+.
T Consensus 98 -~~~~d~Vih~A~ 109 (351)
T 3ruf_A 98 -MKGVDHVLHQAA 109 (351)
T ss_dssp -TTTCSEEEECCC
T ss_pred -hcCCCEEEECCc
Confidence 347899987664
No 461
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=85.89 E-value=1.1 Score=38.92 Aligned_cols=46 Identities=17% Similarity=0.125 Sum_probs=35.9
Q ss_pred CEEEEEcccccHHHHHHHhhCC------CCCEEEEEeCCcchHHHHHHHHHH
Q 025824 81 KNTMEIGVYTGYSLLATALALP------DDGKILAMDINRENYELGLPVIQK 126 (247)
Q Consensus 81 ~~vLEiG~g~G~st~~la~~~~------~~~~v~~iD~~~~~~~~a~~~~~~ 126 (247)
-.|+|+|.|.|..+..+++.+. ...+++.||+|+...+.-++.+..
T Consensus 82 ~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~ 133 (387)
T 1zkd_A 82 LRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLAG 133 (387)
T ss_dssp EEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHSTT
T ss_pred cEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHhcC
Confidence 3699999999999988876542 235899999999987766666543
No 462
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=85.82 E-value=4.7 Score=28.99 Aligned_cols=78 Identities=14% Similarity=0.105 Sum_probs=50.7
Q ss_pred CCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCceeEEEEcCCc--cchHHHHHHHHhcCC
Q 025824 104 DGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDFIFVDADK--DNYLNYHKRLIELVK 181 (247)
Q Consensus 104 ~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~fD~v~id~~~--~~~~~~l~~~~~~L~ 181 (247)
..+|..+|-++......+..+...|. .+. ...+..+.+..+ ....+|+|++|... ..-...++.+.....
T Consensus 3 ~~~ILivdd~~~~~~~l~~~L~~~g~--~v~-~~~~~~~a~~~l-----~~~~~dliild~~l~~~~g~~~~~~l~~~~~ 74 (155)
T 1qkk_A 3 APSVFLIDDDRDLRKAMQQTLELAGF--TVS-SFASATEALAGL-----SADFAGIVISDIRMPGMDGLALFRKILALDP 74 (155)
T ss_dssp -CEEEEECSCHHHHHHHHHHHHHTTC--EEE-EESCHHHHHHTC-----CTTCCSEEEEESCCSSSCHHHHHHHHHHHCT
T ss_pred CCEEEEEeCCHHHHHHHHHHHHHcCc--EEE-EECCHHHHHHHH-----HhCCCCEEEEeCCCCCCCHHHHHHHHHhhCC
Confidence 45899999999999989999988775 333 345555555544 24679999999763 234556666655433
Q ss_pred CCeEEEEe
Q 025824 182 VGGVIGYD 189 (247)
Q Consensus 182 ~gG~lv~d 189 (247)
.--+|++.
T Consensus 75 ~~pii~ls 82 (155)
T 1qkk_A 75 DLPMILVT 82 (155)
T ss_dssp TSCEEEEE
T ss_pred CCCEEEEE
Confidence 33455543
No 463
>3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A*
Probab=85.82 E-value=6 Score=26.59 Aligned_cols=75 Identities=21% Similarity=0.255 Sum_probs=48.3
Q ss_pred EEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCceeEEEEcCCc--cchHHHHHHHHhcCCCC
Q 025824 106 KILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDFIFVDADK--DNYLNYHKRLIELVKVG 183 (247)
Q Consensus 106 ~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~fD~v~id~~~--~~~~~~l~~~~~~L~~g 183 (247)
+|..+|-++......+..+...|. .+. ...+..+.+..+. ..++|+|++|..- .+-.+.++.+.+.-..-
T Consensus 3 ~ilivdd~~~~~~~l~~~l~~~~~--~v~-~~~~~~~a~~~~~-----~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~ 74 (116)
T 3a10_A 3 RILVVDDEPNIRELLKEELQEEGY--EID-TAENGEEALKKFF-----SGNYDLVILDIEMPGISGLEVAGEIRKKKKDA 74 (116)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTC--EEE-EESSHHHHHHHHH-----HSCCSEEEECSCCSSSCHHHHHHHHHHHCTTC
T ss_pred EEEEEeCCHHHHHHHHHHHHHCCC--EEE-EeCCHHHHHHHHh-----cCCCCEEEEECCCCCCCHHHHHHHHHccCCCC
Confidence 688899999988888888888765 233 4455556655543 3579999999763 23345566555432223
Q ss_pred eEEEE
Q 025824 184 GVIGY 188 (247)
Q Consensus 184 G~lv~ 188 (247)
-++++
T Consensus 75 ~ii~~ 79 (116)
T 3a10_A 75 KIILL 79 (116)
T ss_dssp CEEEE
T ss_pred eEEEE
Confidence 44544
No 464
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=85.81 E-value=2.2 Score=33.69 Aligned_cols=84 Identities=14% Similarity=0.092 Sum_probs=53.1
Q ss_pred CCEEEEEcccccHHHHHHHhhCCC-C-CEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhh--hHHHHhhhcCCC
Q 025824 80 AKNTMEIGVYTGYSLLATALALPD-D-GKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPV--LDLLIQDEKNHG 155 (247)
Q Consensus 80 ~~~vLEiG~g~G~st~~la~~~~~-~-~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~--l~~l~~~~~~~~ 155 (247)
.++||-+| |+|..+..+++.+.. + .+|++++.+++.... -...+++++.+|..+. +..+ -.
T Consensus 23 mk~vlVtG-atG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~--------~~~~~~~~~~~Dl~d~~~~~~~------~~ 87 (236)
T 3qvo_A 23 MKNVLILG-AGGQIARHVINQLADKQTIKQTLFARQPAKIHK--------PYPTNSQIIMGDVLNHAALKQA------MQ 87 (236)
T ss_dssp CEEEEEET-TTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCS--------SCCTTEEEEECCTTCHHHHHHH------HT
T ss_pred ccEEEEEe-CCcHHHHHHHHHHHhCCCceEEEEEcChhhhcc--------cccCCcEEEEecCCCHHHHHHH------hc
Confidence 46788888 578888888877643 4 589999998764321 1124689999998652 3333 24
Q ss_pred ceeEEEEcCCccchHHHHHHHHh
Q 025824 156 SFDFIFVDADKDNYLNYHKRLIE 178 (247)
Q Consensus 156 ~fD~v~id~~~~~~~~~l~~~~~ 178 (247)
.+|.||..+.........+.+.+
T Consensus 88 ~~D~vv~~a~~~~~~~~~~~~~~ 110 (236)
T 3qvo_A 88 GQDIVYANLTGEDLDIQANSVIA 110 (236)
T ss_dssp TCSEEEEECCSTTHHHHHHHHHH
T ss_pred CCCEEEEcCCCCchhHHHHHHHH
Confidence 67999877654433333333433
No 465
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=85.80 E-value=3.7 Score=32.76 Aligned_cols=84 Identities=15% Similarity=0.086 Sum_probs=54.5
Q ss_pred CCCEEEEEcccccHHHHHHHhhCC--CCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhh--hHHHHhhh-cC
Q 025824 79 NAKNTMEIGVYTGYSLLATALALP--DDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPV--LDLLIQDE-KN 153 (247)
Q Consensus 79 ~~~~vLEiG~g~G~st~~la~~~~--~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~--l~~l~~~~-~~ 153 (247)
+.++||-.| |+|..+..+++.+. .+.+|+.++.+++..+...+.+...+ .++.++.+|..+. +..+.++- ..
T Consensus 3 ~~k~vlITG-asggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~ 79 (276)
T 1wma_A 3 GIHVALVTG-GNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEG--LSPRFHQLDIDDLQSIRALRDFLRKE 79 (276)
T ss_dssp CCCEEEESS-CSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTT--CCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcC--CeeEEEECCCCCHHHHHHHHHHHHHh
Confidence 456788887 56777777777653 36799999999877766666666554 4688888887642 22221100 00
Q ss_pred CCceeEEEEcCC
Q 025824 154 HGSFDFIFVDAD 165 (247)
Q Consensus 154 ~~~fD~v~id~~ 165 (247)
.+.+|+|+..+.
T Consensus 80 ~g~id~li~~Ag 91 (276)
T 1wma_A 80 YGGLDVLVNNAG 91 (276)
T ss_dssp HSSEEEEEECCC
T ss_pred cCCCCEEEECCc
Confidence 247999987653
No 466
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=85.79 E-value=5.4 Score=29.88 Aligned_cols=77 Identities=19% Similarity=0.164 Sum_probs=52.9
Q ss_pred CCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCceeEEEEcCC--ccchHHHHHHHHhcCC
Q 025824 104 DGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDFIFVDAD--KDNYLNYHKRLIELVK 181 (247)
Q Consensus 104 ~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~fD~v~id~~--~~~~~~~l~~~~~~L~ 181 (247)
..+|..+|-++......+..+...|. .+ ....+..+.+..+. ...+|+|++|.. ..+-.+.++.+.+.-.
T Consensus 7 ~~~iLivdd~~~~~~~l~~~L~~~g~--~v-~~~~~~~~al~~~~-----~~~~dlvl~D~~lp~~~g~~~~~~l~~~~~ 78 (184)
T 3rqi_A 7 DKNFLVIDDNEVFAGTLARGLERRGY--AV-RQAHNKDEALKLAG-----AEKFEFITVXLHLGNDSGLSLIAPLCDLQP 78 (184)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHHTTC--EE-EEECSHHHHHHHHT-----TSCCSEEEECSEETTEESHHHHHHHHHHCT
T ss_pred CCeEEEEcCCHHHHHHHHHHHHHCCC--EE-EEeCCHHHHHHHHh-----hCCCCEEEEeccCCCccHHHHHHHHHhcCC
Confidence 45899999999999999999998775 34 44567767766652 567999999975 2334566666655333
Q ss_pred CCeEEEE
Q 025824 182 VGGVIGY 188 (247)
Q Consensus 182 ~gG~lv~ 188 (247)
.--+|++
T Consensus 79 ~~~ii~l 85 (184)
T 3rqi_A 79 DARILVL 85 (184)
T ss_dssp TCEEEEE
T ss_pred CCCEEEE
Confidence 2334444
No 467
>2b4a_A BH3024; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.42A {Bacillus halodurans} SCOP: c.23.1.1
Probab=85.71 E-value=6.4 Score=27.51 Aligned_cols=79 Identities=9% Similarity=0.061 Sum_probs=51.6
Q ss_pred CCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCC-CceeEEEEcCCcc--chHHHHHHHHhc
Q 025824 103 DDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNH-GSFDFIFVDADKD--NYLNYHKRLIEL 179 (247)
Q Consensus 103 ~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~-~~fD~v~id~~~~--~~~~~l~~~~~~ 179 (247)
+..+|..+|-++......+..+...|. ++. ...+..+.+..+. . ..+|+|++|.... +-.+.++.+...
T Consensus 14 ~~~~ilivdd~~~~~~~l~~~L~~~g~--~v~-~~~~~~~al~~l~-----~~~~~dlvilD~~l~~~~g~~~~~~l~~~ 85 (138)
T 2b4a_A 14 QPFRVTLVEDEPSHATLIQYHLNQLGA--EVT-VHPSGSAFFQHRS-----QLSTCDLLIVSDQLVDLSIFSLLDIVKEQ 85 (138)
T ss_dssp CCCEEEEECSCHHHHHHHHHHHHHTTC--EEE-EESSHHHHHHTGG-----GGGSCSEEEEETTCTTSCHHHHHHHHTTS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHHcCC--EEE-EeCCHHHHHHHHH-----hCCCCCEEEEeCCCCCCCHHHHHHHHHhh
Confidence 467999999999999999999988765 332 3455555555442 3 5799999997632 344566666553
Q ss_pred CCCCeEEEEe
Q 025824 180 VKVGGVIGYD 189 (247)
Q Consensus 180 L~~gG~lv~d 189 (247)
...--+|++.
T Consensus 86 ~~~~~ii~ls 95 (138)
T 2b4a_A 86 TKQPSVLILT 95 (138)
T ss_dssp SSCCEEEEEE
T ss_pred CCCCCEEEEE
Confidence 2233444443
No 468
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=85.67 E-value=6.1 Score=34.04 Aligned_cols=83 Identities=14% Similarity=0.150 Sum_probs=55.9
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCC-CC-CEEEEEeCCcchHHHHHHHHHHc-CC-CCcEEEEEecchhh--hHHHHhhh
Q 025824 78 VNAKNTMEIGVYTGYSLLATALALP-DD-GKILAMDINRENYELGLPVIQKA-GV-AHKIDFREGPALPV--LDLLIQDE 151 (247)
Q Consensus 78 ~~~~~vLEiG~g~G~st~~la~~~~-~~-~~v~~iD~~~~~~~~a~~~~~~~-g~-~~~i~~~~gd~~~~--l~~l~~~~ 151 (247)
.+.++||-.| |+|..+..+++.+. .+ .+|++++.++.......+.+... +. ..+++++.+|..+. +..+..
T Consensus 33 ~~~k~vLVTG-atG~IG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-- 109 (399)
T 3nzo_A 33 VSQSRFLVLG-GAGSIGQAVTKEIFKRNPQKLHVVDISENNMVELVRDIRSSFGYINGDFQTFALDIGSIEYDAFIKA-- 109 (399)
T ss_dssp HHTCEEEEET-TTSHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHHTCCCSSEEEEECCCTTSHHHHHHHHH--
T ss_pred hCCCEEEEEc-CChHHHHHHHHHHHHCCCCEEEEEECCcchHHHHHHHHHHhcCCCCCcEEEEEEeCCCHHHHHHHHH--
Confidence 4568899998 56888888887753 24 59999999988765555544432 11 24789999998663 222211
Q ss_pred cCCCceeEEEEcCC
Q 025824 152 KNHGSFDFIFVDAD 165 (247)
Q Consensus 152 ~~~~~fD~v~id~~ 165 (247)
...+|.||.-+.
T Consensus 110 --~~~~D~Vih~Aa 121 (399)
T 3nzo_A 110 --DGQYDYVLNLSA 121 (399)
T ss_dssp --CCCCSEEEECCC
T ss_pred --hCCCCEEEECCC
Confidence 357999987654
No 469
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=85.41 E-value=3.6 Score=36.67 Aligned_cols=99 Identities=16% Similarity=0.134 Sum_probs=56.8
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCCC-CCEEEEEeCCcchHHHHHHHHHH---cCC---------CCcEEEEEecchhhh
Q 025824 78 VNAKNTMEIGVYTGYSLLATALALPD-DGKILAMDINRENYELGLPVIQK---AGV---------AHKIDFREGPALPVL 144 (247)
Q Consensus 78 ~~~~~vLEiG~g~G~st~~la~~~~~-~~~v~~iD~~~~~~~~a~~~~~~---~g~---------~~~i~~~~gd~~~~l 144 (247)
....+|.-||+| +.+..++..+.. +.+|+++|++++.++..++.... .|+ ..++++ ..|..+.+
T Consensus 6 ~~~~~I~VIG~G--~vG~~lA~~la~~G~~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~-ttd~~~a~ 82 (478)
T 2y0c_A 6 HGSMNLTIIGSG--SVGLVTGACLADIGHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRF-STDIEAAV 82 (478)
T ss_dssp -CCCEEEEECCS--HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEE-ECCHHHHH
T ss_pred CCCceEEEECcC--HHHHHHHHHHHhCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEE-ECCHHHHh
Confidence 355788888855 554444443321 46899999999877665442100 010 012332 12221111
Q ss_pred HHHHhhhcCCCceeEEEEcCCc----------cchHHHHHHHHhcCCCCeEEEEe
Q 025824 145 DLLIQDEKNHGSFDFIFVDADK----------DNYLNYHKRLIELVKVGGVIGYD 189 (247)
Q Consensus 145 ~~l~~~~~~~~~fD~v~id~~~----------~~~~~~l~~~~~~L~~gG~lv~d 189 (247)
...|+||+.-+. ......++.+.+.|++|.+++.-
T Consensus 83 ----------~~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~iVV~~ 127 (478)
T 2y0c_A 83 ----------AHGDVQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTGFKVIVDK 127 (478)
T ss_dssp ----------HHCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEEC
T ss_pred ----------hcCCEEEEEeCCCcccCCCccHHHHHHHHHHHHHhcCCCCEEEEe
Confidence 357999987543 45566777788899998887643
No 470
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=85.41 E-value=4.7 Score=28.87 Aligned_cols=79 Identities=11% Similarity=0.096 Sum_probs=50.5
Q ss_pred CCEEEEEeCCcchHHHHHHHHHH-cCCCCcEEEEEecchhhhHHHHhhhcCCCceeEEEEcCCc--cchHHHHHHHHhcC
Q 025824 104 DGKILAMDINRENYELGLPVIQK-AGVAHKIDFREGPALPVLDLLIQDEKNHGSFDFIFVDADK--DNYLNYHKRLIELV 180 (247)
Q Consensus 104 ~~~v~~iD~~~~~~~~a~~~~~~-~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~fD~v~id~~~--~~~~~~l~~~~~~L 180 (247)
..+|..+|-++......+..+.. .|. .+.....+..+.+..+. ...+|+|++|... .+-.+.++.+...-
T Consensus 5 ~~~ILivdd~~~~~~~l~~~L~~~~~~--~v~~~~~~~~~a~~~l~-----~~~~dlii~D~~l~~~~g~~~~~~l~~~~ 77 (153)
T 3cz5_A 5 TARIMLVDDHPIVREGYRRLIERRPGY--AVVAEAADAGEAYRLYR-----ETTPDIVVMDLTLPGPGGIEATRHIRQWD 77 (153)
T ss_dssp CEEEEEECSCHHHHHHHHHHHTTSTTE--EEEEEESSHHHHHHHHH-----TTCCSEEEECSCCSSSCHHHHHHHHHHHC
T ss_pred ccEEEEECCcHHHHHHHHHHHhhCCCc--EEEEEeCCHHHHHHHHh-----cCCCCEEEEecCCCCCCHHHHHHHHHHhC
Confidence 35899999999988888888876 443 22224566666665553 4679999999762 23456666665543
Q ss_pred CCCeEEEEe
Q 025824 181 KVGGVIGYD 189 (247)
Q Consensus 181 ~~gG~lv~d 189 (247)
..--+|++.
T Consensus 78 ~~~~ii~ls 86 (153)
T 3cz5_A 78 GAARILIFT 86 (153)
T ss_dssp TTCCEEEEE
T ss_pred CCCeEEEEE
Confidence 333455543
No 471
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=85.37 E-value=6 Score=26.78 Aligned_cols=67 Identities=15% Similarity=0.110 Sum_probs=45.5
Q ss_pred CEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCceeEEEEcCCcc--chHHHHHHHHh
Q 025824 105 GKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDFIFVDADKD--NYLNYHKRLIE 178 (247)
Q Consensus 105 ~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~fD~v~id~~~~--~~~~~l~~~~~ 178 (247)
.+|..+|-++......+..+...|. .+.....+..+.+..+. ..++|+|++|..-. +-.+.++.+.+
T Consensus 3 ~~ilivdd~~~~~~~l~~~l~~~g~--~vv~~~~~~~~a~~~~~-----~~~~dlil~D~~l~~~~g~~~~~~l~~ 71 (120)
T 1tmy_A 3 KRVLIVDDAAFMRMMLKDIITKAGY--EVAGEATNGREAVEKYK-----ELKPDIVTMDITMPEMNGIDAIKEIMK 71 (120)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHH-----HHCCSEEEEECSCGGGCHHHHHHHHHH
T ss_pred ceEEEEcCcHHHHHHHHHHHhhcCc--EEEEEECCHHHHHHHHH-----hcCCCEEEEeCCCCCCcHHHHHHHHHh
Confidence 4788999999988888888887765 23334566666665553 34689999997632 33455665554
No 472
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=85.30 E-value=8.4 Score=27.65 Aligned_cols=68 Identities=15% Similarity=0.100 Sum_probs=48.7
Q ss_pred CCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCceeEEEEcCC--ccchHHHHHHHHhc
Q 025824 104 DGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDFIFVDAD--KDNYLNYHKRLIEL 179 (247)
Q Consensus 104 ~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~fD~v~id~~--~~~~~~~l~~~~~~ 179 (247)
..+|..+|-++......++.+...|. .+ ....+..+.+..+. ..++|+|++|.. ..+-.++++.+...
T Consensus 7 ~~~ILivdd~~~~~~~l~~~L~~~g~--~v-~~~~~~~~al~~l~-----~~~~dlii~D~~l~~~~g~~~~~~lr~~ 76 (154)
T 3gt7_A 7 AGEILIVEDSPTQAEHLKHILEETGY--QT-EHVRNGREAVRFLS-----LTRPDLIISDVLMPEMDGYALCRWLKGQ 76 (154)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHTTTC--EE-EEESSHHHHHHHHT-----TCCCSEEEEESCCSSSCHHHHHHHHHHS
T ss_pred CCcEEEEeCCHHHHHHHHHHHHHCCC--EE-EEeCCHHHHHHHHH-----hCCCCEEEEeCCCCCCCHHHHHHHHHhC
Confidence 46899999999999999999988775 33 33456666666552 568999999976 23445666666543
No 473
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=85.17 E-value=2.8 Score=37.21 Aligned_cols=74 Identities=16% Similarity=0.121 Sum_probs=50.1
Q ss_pred CCEEEEEcccccHHHHHHHhhCCC-CCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCcee
Q 025824 80 AKNTMEIGVYTGYSLLATALALPD-DGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFD 158 (247)
Q Consensus 80 ~~~vLEiG~g~G~st~~la~~~~~-~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~fD 158 (247)
..+|+=+| .|..+..+++.+.. +-.|+.||.+++.++.+.+. .+ +..++||+.+. ..|...| -+..|
T Consensus 3 ~M~iiI~G--~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~---~~----~~~i~Gd~~~~-~~L~~Ag--i~~ad 70 (461)
T 4g65_A 3 AMKIIILG--AGQVGGTLAENLVGENNDITIVDKDGDRLRELQDK---YD----LRVVNGHASHP-DVLHEAG--AQDAD 70 (461)
T ss_dssp CEEEEEEC--CSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHH---SS----CEEEESCTTCH-HHHHHHT--TTTCS
T ss_pred cCEEEEEC--CCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHh---cC----cEEEEEcCCCH-HHHHhcC--CCcCC
Confidence 35677766 57888888988753 45799999999977665443 22 57889998653 2222222 56889
Q ss_pred EEEEcCC
Q 025824 159 FIFVDAD 165 (247)
Q Consensus 159 ~v~id~~ 165 (247)
+++.-.+
T Consensus 71 ~~ia~t~ 77 (461)
T 4g65_A 71 MLVAVTN 77 (461)
T ss_dssp EEEECCS
T ss_pred EEEEEcC
Confidence 8876444
No 474
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=85.13 E-value=1.3 Score=32.26 Aligned_cols=70 Identities=21% Similarity=0.269 Sum_probs=50.8
Q ss_pred CCCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCceeEEEEcCC--ccchHHHHHHHH
Q 025824 101 LPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDFIFVDAD--KDNYLNYHKRLI 177 (247)
Q Consensus 101 ~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~fD~v~id~~--~~~~~~~l~~~~ 177 (247)
+.++-+|..+|=++......+..++..|+. +.....|+.+.+..+. ..+||+|++|.. .-+-.+.++.+.
T Consensus 9 m~k~~rILiVDD~~~~r~~l~~~L~~~G~~--~v~~a~~g~~al~~~~-----~~~~DlillD~~MP~mdG~el~~~ir 80 (134)
T 3to5_A 9 LNKNMKILIVDDFSTMRRIVKNLLRDLGFN--NTQEADDGLTALPMLK-----KGDFDFVVTDWNMPGMQGIDLLKNIR 80 (134)
T ss_dssp CCTTCCEEEECSCHHHHHHHHHHHHHTTCC--CEEEESSHHHHHHHHH-----HHCCSEEEEESCCSSSCHHHHHHHHH
T ss_pred hCCCCEEEEEeCCHHHHHHHHHHHHHcCCc--EEEEECCHHHHHHHHH-----hCCCCEEEEcCCCCCCCHHHHHHHHH
Confidence 344568999999999999999999998873 2334567777766553 358999999976 223456666665
No 475
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=84.89 E-value=5.7 Score=31.69 Aligned_cols=83 Identities=16% Similarity=0.134 Sum_probs=56.0
Q ss_pred CCCEEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhh--hHHHHhhh-cCC
Q 025824 79 NAKNTMEIGVYTGYSLLATALALP-DDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPV--LDLLIQDE-KNH 154 (247)
Q Consensus 79 ~~~~vLEiG~g~G~st~~la~~~~-~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~--l~~l~~~~-~~~ 154 (247)
+.+++|-.|++ |..+..+++.+. .+.+|+.++.+++.++.+.+.+...+ .++.++.+|..+. +..+.++- ..
T Consensus 6 ~~k~vlVTGas-~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~- 81 (252)
T 3h7a_A 6 RNATVAVIGAG-DYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAG--GRIVARSLDARNEDEVTAFLNAADAH- 81 (252)
T ss_dssp CSCEEEEECCS-SHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHHHH-
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CeEEEEECcCCCHHHHHHHHHHHHhh-
Confidence 56788989865 445566665542 36799999999998888777777665 4788999987652 22222110 01
Q ss_pred CceeEEEEcCC
Q 025824 155 GSFDFIFVDAD 165 (247)
Q Consensus 155 ~~fD~v~id~~ 165 (247)
+.+|+++..+.
T Consensus 82 g~id~lv~nAg 92 (252)
T 3h7a_A 82 APLEVTIFNVG 92 (252)
T ss_dssp SCEEEEEECCC
T ss_pred CCceEEEECCC
Confidence 57999987654
No 476
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=84.82 E-value=0.64 Score=38.16 Aligned_cols=37 Identities=19% Similarity=0.433 Sum_probs=26.6
Q ss_pred CceeEEEEcCC----ccchHHHHHHH----------HhcCCCCeEEEEecc
Q 025824 155 GSFDFIFVDAD----KDNYLNYHKRL----------IELVKVGGVIGYDNT 191 (247)
Q Consensus 155 ~~fD~v~id~~----~~~~~~~l~~~----------~~~L~~gG~lv~d~~ 191 (247)
+.||+||++.. ..+|.+.-+.+ ..+|+|||.+++-..
T Consensus 210 grYDlVfvNv~TpyR~HHYQQCeDHA~~l~mL~~~al~~L~pGGtlv~~aY 260 (324)
T 3trk_A 210 GRYDLVVINIHTPFRIHHYQQCVDHAMKLQMLGGDSLRLLKPGGSLLIRAY 260 (324)
T ss_dssp CCEEEEEEECCCCCCSSHHHHHHHHHHHHHHHHHHGGGGEEEEEEEEEEEC
T ss_pred CceeEEEEecCCccccchHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEee
Confidence 79999999865 34555544333 378999999997543
No 477
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=84.75 E-value=4.4 Score=33.09 Aligned_cols=84 Identities=23% Similarity=0.136 Sum_probs=53.8
Q ss_pred CCCEEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhh--hHHHHhhh-cCC
Q 025824 79 NAKNTMEIGVYTGYSLLATALALP-DDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPV--LDLLIQDE-KNH 154 (247)
Q Consensus 79 ~~~~vLEiG~g~G~st~~la~~~~-~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~--l~~l~~~~-~~~ 154 (247)
..+++|-.|++ |..+..+++.+. .+.+|+.++.+++.++...+.+...+ .++.++..|..+. +..+.++- ...
T Consensus 27 ~~k~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 103 (283)
T 3v8b_A 27 PSPVALITGAG-SGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAG--GQAIALEADVSDELQMRNAVRDLVLKF 103 (283)
T ss_dssp CCCEEEEESCS-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTT--CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 56788999855 455666665542 36799999999887776666665443 4688888887652 22221100 012
Q ss_pred CceeEEEEcCC
Q 025824 155 GSFDFIFVDAD 165 (247)
Q Consensus 155 ~~fD~v~id~~ 165 (247)
+.+|+++..+.
T Consensus 104 g~iD~lVnnAg 114 (283)
T 3v8b_A 104 GHLDIVVANAG 114 (283)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 57999987654
No 478
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=84.71 E-value=4.2 Score=36.29 Aligned_cols=104 Identities=16% Similarity=0.157 Sum_probs=57.0
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCC-C-CC-EEEEEeCCcc----hHHHHHHH--------------HHHcCCCCcEEEE
Q 025824 78 VNAKNTMEIGVYTGYSLLATALALP-D-DG-KILAMDINRE----NYELGLPV--------------IQKAGVAHKIDFR 136 (247)
Q Consensus 78 ~~~~~vLEiG~g~G~st~~la~~~~-~-~~-~v~~iD~~~~----~~~~a~~~--------------~~~~g~~~~i~~~ 136 (247)
.+..+|--||+| +.+..+|..+. . +- +|+++|++++ .++..++. +++.-...++++
T Consensus 16 ~~~mkIaVIGlG--~mG~~lA~~la~~~G~~~V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~g~l~~- 92 (478)
T 3g79_A 16 GPIKKIGVLGMG--YVGIPAAVLFADAPCFEKVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAGKFEC- 92 (478)
T ss_dssp CSCCEEEEECCS--TTHHHHHHHHHHSTTCCEEEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHTTCEEE-
T ss_pred CCCCEEEEECcC--HHHHHHHHHHHHhCCCCeEEEEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhhcccCCeEE-
Confidence 455788889865 44444333322 1 45 7999999998 66544321 110000123433
Q ss_pred EecchhhhHHHHhhhcCCCceeEEEEcCCcc------------chHHHHHHHHhcCCCCeEEEEecccccc
Q 025824 137 EGPALPVLDLLIQDEKNHGSFDFIFVDADKD------------NYLNYHKRLIELVKVGGVIGYDNTLWNG 195 (247)
Q Consensus 137 ~gd~~~~l~~l~~~~~~~~~fD~v~id~~~~------------~~~~~l~~~~~~L~~gG~lv~d~~~~~g 195 (247)
..| .+.+ ...|+||+.-+.. ......+.+.+.|++|.++|..-+..+|
T Consensus 93 ttd-~ea~----------~~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~pg 152 (478)
T 3g79_A 93 TPD-FSRI----------SELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLVVLESTITPG 152 (478)
T ss_dssp ESC-GGGG----------GGCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCCTTCEEEECSCCCTT
T ss_pred eCc-HHHH----------hcCCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcCCCcEEEEeCCCChH
Confidence 223 2222 3579998764311 1344556777889999888765444433
No 479
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=84.57 E-value=4.7 Score=27.44 Aligned_cols=76 Identities=13% Similarity=0.100 Sum_probs=51.3
Q ss_pred CEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCceeEEEEcCCcc---chHHHHHHHHhc--
Q 025824 105 GKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDFIFVDADKD---NYLNYHKRLIEL-- 179 (247)
Q Consensus 105 ~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~fD~v~id~~~~---~~~~~l~~~~~~-- 179 (247)
.+|..+|-++......+..+...|. ++. ...+..+.+..+. ...+|+|++|.... +-...++.+.+.
T Consensus 6 ~~ilivdd~~~~~~~l~~~L~~~g~--~v~-~~~~~~~a~~~~~-----~~~~dlvi~d~~~~~~~~g~~~~~~l~~~~~ 77 (127)
T 2gkg_A 6 KKILIVESDTALSATLRSALEGRGF--TVD-ETTDGKGSVEQIR-----RDRPDLVVLAVDLSAGQNGYLICGKLKKDDD 77 (127)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHHTC--EEE-EECCHHHHHHHHH-----HHCCSEEEEESBCGGGCBHHHHHHHHHHSTT
T ss_pred CeEEEEeCCHHHHHHHHHHHHhcCc--eEE-EecCHHHHHHHHH-----hcCCCEEEEeCCCCCCCCHHHHHHHHhcCcc
Confidence 4799999999999889999988775 343 4455556655543 34699999997633 445666777654
Q ss_pred CCCCeEEEE
Q 025824 180 VKVGGVIGY 188 (247)
Q Consensus 180 L~~gG~lv~ 188 (247)
...--+|++
T Consensus 78 ~~~~~ii~~ 86 (127)
T 2gkg_A 78 LKNVPIVII 86 (127)
T ss_dssp TTTSCEEEE
T ss_pred ccCCCEEEE
Confidence 333345555
No 480
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=84.53 E-value=6.2 Score=34.18 Aligned_cols=89 Identities=11% Similarity=0.093 Sum_probs=54.5
Q ss_pred EEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHHHHHHHHHcCC--------------CCcEEEEEecchhhhHHH
Q 025824 82 NTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGV--------------AHKIDFREGPALPVLDLL 147 (247)
Q Consensus 82 ~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~--------------~~~i~~~~gd~~~~l~~l 147 (247)
+|.-|| .|+.+..++..+..+.+|+++|.+++.++..++ .+. ..++++ ..+..+.+
T Consensus 2 kI~VIG--~G~vG~~~A~~La~G~~V~~~d~~~~~~~~l~~----~~~~i~e~~l~~~~~~~~~~l~~-t~~~~~~~--- 71 (402)
T 1dlj_A 2 KIAVAG--SGYVGLSLGVLLSLQNEVTIVDILPSKVDKINN----GLSPIQDEYIEYYLKSKQLSIKA-TLDSKAAY--- 71 (402)
T ss_dssp EEEEEC--CSHHHHHHHHHHTTTSEEEEECSCHHHHHHHHT----TCCSSCCHHHHHHHHHSCCCEEE-ESCHHHHH---
T ss_pred EEEEEC--CCHHHHHHHHHHhCCCEEEEEECCHHHHHHHHc----CCCCcCCCCHHHHHHhccCcEEE-eCCHHHHh---
Confidence 466677 578888777766545689999999886654322 221 012222 12211211
Q ss_pred HhhhcCCCceeEEEEcCCcc-----------chHHHHHHHHhcCCCCeEEEE
Q 025824 148 IQDEKNHGSFDFIFVDADKD-----------NYLNYHKRLIELVKVGGVIGY 188 (247)
Q Consensus 148 ~~~~~~~~~fD~v~id~~~~-----------~~~~~l~~~~~~L~~gG~lv~ 188 (247)
...|+||+..+.. .....++.+.+ +++|.+++.
T Consensus 72 -------~~aDvviiavpt~~~~~~~~~dl~~v~~v~~~i~~-l~~~~iVV~ 115 (402)
T 1dlj_A 72 -------KEAELVIIATPTNYNSRINYFDTQHVETVIKEVLS-VNSHATLII 115 (402)
T ss_dssp -------HHCSEEEECCCCCEETTTTEECCHHHHHHHHHHHH-HCSSCEEEE
T ss_pred -------cCCCEEEEecCCCcccCCCCccHHHHHHHHHHHHh-hCCCCEEEE
Confidence 3579999865533 25667777778 899888775
No 481
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=84.41 E-value=3.3 Score=34.55 Aligned_cols=96 Identities=6% Similarity=-0.027 Sum_probs=55.3
Q ss_pred CCCEEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCcchHHHHHHHHHHcCCC---CcEEEEEe-cchhhhHHHHhhhcC
Q 025824 79 NAKNTMEIGVYTGYSLLATALALP-DDGKILAMDINRENYELGLPVIQKAGVA---HKIDFREG-PALPVLDLLIQDEKN 153 (247)
Q Consensus 79 ~~~~vLEiG~g~G~st~~la~~~~-~~~~v~~iD~~~~~~~~a~~~~~~~g~~---~~i~~~~g-d~~~~l~~l~~~~~~ 153 (247)
...+|.-||+| ..+..++..+. .+..|+.+ .+++.++..++ .|+. ....+... .+......
T Consensus 18 ~~~kI~IiGaG--a~G~~~a~~L~~~G~~V~l~-~~~~~~~~i~~----~g~~~~~~~~~~~~~~~~~~~~~~------- 83 (318)
T 3hwr_A 18 QGMKVAIMGAG--AVGCYYGGMLARAGHEVILI-ARPQHVQAIEA----TGLRLETQSFDEQVKVSASSDPSA------- 83 (318)
T ss_dssp --CEEEEESCS--HHHHHHHHHHHHTTCEEEEE-CCHHHHHHHHH----HCEEEECSSCEEEECCEEESCGGG-------
T ss_pred cCCcEEEECcC--HHHHHHHHHHHHCCCeEEEE-EcHhHHHHHHh----CCeEEEcCCCcEEEeeeeeCCHHH-------
Confidence 45789999865 44444443332 14578888 88776655443 2321 00111000 00011111
Q ss_pred CCceeEEEEcCCccchHHHHHHHHhcCCCCeEEEE
Q 025824 154 HGSFDFIFVDADKDNYLNYHKRLIELVKVGGVIGY 188 (247)
Q Consensus 154 ~~~fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv~ 188 (247)
...+|+||+-.........++.+.+.++++.+|+.
T Consensus 84 ~~~~D~vilavk~~~~~~~l~~l~~~l~~~~~iv~ 118 (318)
T 3hwr_A 84 VQGADLVLFCVKSTDTQSAALAMKPALAKSALVLS 118 (318)
T ss_dssp GTTCSEEEECCCGGGHHHHHHHHTTTSCTTCEEEE
T ss_pred cCCCCEEEEEcccccHHHHHHHHHHhcCCCCEEEE
Confidence 24789999988766778888999999999987764
No 482
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=84.37 E-value=6.7 Score=31.75 Aligned_cols=84 Identities=12% Similarity=0.147 Sum_probs=56.5
Q ss_pred cCCCEEEEEcccccHHHHHHHhhC-CCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhh--hHHHHhhh-cC
Q 025824 78 VNAKNTMEIGVYTGYSLLATALAL-PDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPV--LDLLIQDE-KN 153 (247)
Q Consensus 78 ~~~~~vLEiG~g~G~st~~la~~~-~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~--l~~l~~~~-~~ 153 (247)
.+.+.+|-.|.+.| .+..+++.+ ..+++|+.+|.+++.++.+.+.++..|. ++.++..|..+. +..+..+- ..
T Consensus 5 L~gKvalVTGas~G-IG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~--~~~~~~~Dvt~~~~v~~~~~~~~~~ 81 (254)
T 4fn4_A 5 LKNKVVIVTGAGSG-IGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGK--EVLGVKADVSKKKDVEEFVRRTFET 81 (254)
T ss_dssp GTTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCH-HHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCC--cEEEEEccCCCHHHHHHHHHHHHHH
Confidence 36788999996655 445555443 2378999999999999888888887763 688888887642 22221110 01
Q ss_pred CCceeEEEEcC
Q 025824 154 HGSFDFIFVDA 164 (247)
Q Consensus 154 ~~~fD~v~id~ 164 (247)
.++.|+++..+
T Consensus 82 ~G~iDiLVNNA 92 (254)
T 4fn4_A 82 YSRIDVLCNNA 92 (254)
T ss_dssp HSCCCEEEECC
T ss_pred cCCCCEEEECC
Confidence 36899888654
No 483
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=84.16 E-value=4 Score=28.92 Aligned_cols=94 Identities=18% Similarity=0.140 Sum_probs=52.8
Q ss_pred CCEEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCcee
Q 025824 80 AKNTMEIGVYTGYSLLATALALP-DDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFD 158 (247)
Q Consensus 80 ~~~vLEiG~g~G~st~~la~~~~-~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~fD 158 (247)
.++|+-+|+ |..+..++..+. .+.+|+.+|.+++..+.++ ..+ ..++.+|..+. ..+... ....+|
T Consensus 6 ~~~v~I~G~--G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~----~~~----~~~~~~d~~~~-~~l~~~--~~~~~d 72 (144)
T 2hmt_A 6 NKQFAVIGL--GRFGGSIVKELHRMGHEVLAVDINEEKVNAYA----SYA----THAVIANATEE-NELLSL--GIRNFE 72 (144)
T ss_dssp CCSEEEECC--SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTT----TTC----SEEEECCTTCH-HHHHTT--TGGGCS
T ss_pred CCcEEEECC--CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----HhC----CEEEEeCCCCH-HHHHhc--CCCCCC
Confidence 457999995 777777666543 2468999999876543321 122 35667776542 222110 025789
Q ss_pred EEEEcCCcc-chHHHHHHHHhcCCCCeEEE
Q 025824 159 FIFVDADKD-NYLNYHKRLIELVKVGGVIG 187 (247)
Q Consensus 159 ~v~id~~~~-~~~~~l~~~~~~L~~gG~lv 187 (247)
+|++..... ..........+.+.+. .++
T Consensus 73 ~vi~~~~~~~~~~~~~~~~~~~~~~~-~ii 101 (144)
T 2hmt_A 73 YVIVAIGANIQASTLTTLLLKELDIP-NIW 101 (144)
T ss_dssp EEEECCCSCHHHHHHHHHHHHHTTCS-EEE
T ss_pred EEEECCCCchHHHHHHHHHHHHcCCC-eEE
Confidence 998876532 2222333344556666 444
No 484
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=84.14 E-value=7.6 Score=31.11 Aligned_cols=84 Identities=14% Similarity=0.074 Sum_probs=55.4
Q ss_pred cCCCEEEEEcccccHHHHHHHhhC-CCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhh--hHHHHhhh-cC
Q 025824 78 VNAKNTMEIGVYTGYSLLATALAL-PDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPV--LDLLIQDE-KN 153 (247)
Q Consensus 78 ~~~~~vLEiG~g~G~st~~la~~~-~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~--l~~l~~~~-~~ 153 (247)
...+++|-.|++.| .+..+++.+ ..+.+|+.++.+++.++...+.+...+ .++.++..|..+. +..+.++- ..
T Consensus 9 l~~k~vlVTGas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~ 85 (264)
T 3ucx_A 9 LTDKVVVISGVGPA-LGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTG--RRALSVGTDITDDAQVAHLVDETMKA 85 (264)
T ss_dssp TTTCEEEEESCCTT-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCcEEEEECCCcH-HHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 45688999997554 455555443 236799999999988877777777655 4688899887652 22221100 01
Q ss_pred CCceeEEEEcC
Q 025824 154 HGSFDFIFVDA 164 (247)
Q Consensus 154 ~~~fD~v~id~ 164 (247)
.+++|+++..+
T Consensus 86 ~g~id~lv~nA 96 (264)
T 3ucx_A 86 YGRVDVVINNA 96 (264)
T ss_dssp TSCCSEEEECC
T ss_pred cCCCcEEEECC
Confidence 35799998765
No 485
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=84.10 E-value=11 Score=30.68 Aligned_cols=107 Identities=17% Similarity=0.194 Sum_probs=63.4
Q ss_pred CCCEEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCc--chHHHHHHHHHHcCCCCcEEEEEecchhh--hHHHHhhh-c
Q 025824 79 NAKNTMEIGVYTGYSLLATALALP-DDGKILAMDINR--ENYELGLPVIQKAGVAHKIDFREGPALPV--LDLLIQDE-K 152 (247)
Q Consensus 79 ~~~~vLEiG~g~G~st~~la~~~~-~~~~v~~iD~~~--~~~~~a~~~~~~~g~~~~i~~~~gd~~~~--l~~l~~~~-~ 152 (247)
+.+++|-.|. +|..+..+++.+. .+.+|+.++.+. +..+...+.++..+ .++.++.+|..+. +..+.++- .
T Consensus 48 ~~k~vlVTGa-s~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~ 124 (294)
T 3r3s_A 48 KDRKALVTGG-DSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECG--RKAVLLPGDLSDESFARSLVHKARE 124 (294)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTT--CCEEECCCCTTSHHHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcC--CcEEEEEecCCCHHHHHHHHHHHHH
Confidence 4678999995 4556666666542 367899998873 34455555555554 4688888887642 22221100 0
Q ss_pred CCCceeEEEEcCCcc------------ch-----------HHHHHHHHhcCCCCeEEEE
Q 025824 153 NHGSFDFIFVDADKD------------NY-----------LNYHKRLIELVKVGGVIGY 188 (247)
Q Consensus 153 ~~~~fD~v~id~~~~------------~~-----------~~~l~~~~~~L~~gG~lv~ 188 (247)
..+.+|+++..+... .+ ....+.+.+.++++|.||.
T Consensus 125 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~ 183 (294)
T 3r3s_A 125 ALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIIT 183 (294)
T ss_dssp HHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEE
T ss_pred HcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEE
Confidence 125789998765410 01 1233455578888888775
No 486
>3crn_A Response regulator receiver domain protein, CHEY-; structural genomics, signal regulator receiver domain; HET: PHD; 1.58A {Methanospirillum hungatei jf-1}
Probab=84.01 E-value=7 Score=27.14 Aligned_cols=75 Identities=13% Similarity=0.127 Sum_probs=49.6
Q ss_pred CEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCceeEEEEcCCc--cchHHHHHHHHhcCCC
Q 025824 105 GKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDFIFVDADK--DNYLNYHKRLIELVKV 182 (247)
Q Consensus 105 ~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~fD~v~id~~~--~~~~~~l~~~~~~L~~ 182 (247)
.+|..+|-++......+..+...|. .+. ...+..+.+..+. ...+|+|++|..- .+-.+.++.+.+. .+
T Consensus 4 ~~Ilivdd~~~~~~~l~~~L~~~g~--~v~-~~~~~~~al~~~~-----~~~~dlvl~D~~l~~~~g~~~~~~l~~~-~~ 74 (132)
T 3crn_A 4 KRILIVDDDTAILDSTKQILEFEGY--EVE-IAATAGEGLAKIE-----NEFFNLALFXIKLPDMEGTELLEKAHKL-RP 74 (132)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTC--EEE-EESSHHHHHHHHH-----HSCCSEEEECSBCSSSBHHHHHHHHHHH-CT
T ss_pred cEEEEEeCCHHHHHHHHHHHHHCCc--eEE-EeCCHHHHHHHHh-----cCCCCEEEEecCCCCCchHHHHHHHHhh-CC
Confidence 4799999999998888998987765 343 4566666665553 3579999999752 2334556665543 34
Q ss_pred C-eEEEE
Q 025824 183 G-GVIGY 188 (247)
Q Consensus 183 g-G~lv~ 188 (247)
+ -+|++
T Consensus 75 ~~~ii~~ 81 (132)
T 3crn_A 75 GMKKIMV 81 (132)
T ss_dssp TSEEEEE
T ss_pred CCcEEEE
Confidence 4 34444
No 487
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=83.96 E-value=5.4 Score=33.43 Aligned_cols=98 Identities=14% Similarity=0.057 Sum_probs=57.3
Q ss_pred CEEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCcchHHHHHHHHHHcCCC---CcEE-EEEe-cchhhhHHHHhhhcCC
Q 025824 81 KNTMEIGVYTGYSLLATALALP-DDGKILAMDINRENYELGLPVIQKAGVA---HKID-FREG-PALPVLDLLIQDEKNH 154 (247)
Q Consensus 81 ~~vLEiG~g~G~st~~la~~~~-~~~~v~~iD~~~~~~~~a~~~~~~~g~~---~~i~-~~~g-d~~~~l~~l~~~~~~~ 154 (247)
.+|.-||+| ..+..++..+. .+.+|+.+|.+++.++..++.. ++. .... ...- .....+... -
T Consensus 5 mki~iiG~G--~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~------~ 73 (359)
T 1bg6_A 5 KTYAVLGLG--NGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRG---AIIAEGPGLAGTAHPDLLTSDIGLA------V 73 (359)
T ss_dssp CEEEEECCS--HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHT---SEEEESSSCCEEECCSEEESCHHHH------H
T ss_pred CeEEEECCC--HHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcC---CeEEeccccccccccceecCCHHHH------H
Confidence 589999875 44444444332 2468999999988665544321 210 0000 0000 011122222 1
Q ss_pred CceeEEEEcCCccchHHHHHHHHhcCCCCeEEEEe
Q 025824 155 GSFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYD 189 (247)
Q Consensus 155 ~~fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv~d 189 (247)
..+|+||+-.........++.+.+.+++|.+++..
T Consensus 74 ~~~D~vi~~v~~~~~~~~~~~l~~~l~~~~~vv~~ 108 (359)
T 1bg6_A 74 KDADVILIVVPAIHHASIAANIASYISEGQLIILN 108 (359)
T ss_dssp TTCSEEEECSCGGGHHHHHHHHGGGCCTTCEEEES
T ss_pred hcCCEEEEeCCchHHHHHHHHHHHhCCCCCEEEEc
Confidence 46899999887666678888888899998877654
No 488
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=83.86 E-value=2.4 Score=32.83 Aligned_cols=70 Identities=14% Similarity=0.007 Sum_probs=48.2
Q ss_pred EEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCceeEE
Q 025824 82 NTMEIGVYTGYSLLATALALP-DDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDFI 160 (247)
Q Consensus 82 ~vLEiG~g~G~st~~la~~~~-~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~fD~v 160 (247)
+||-+| |+|..+..+++.+. .+.+|++++.++..... . .+++++.+|..+....+.+. -..+|.|
T Consensus 2 ~ilItG-atG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---------~-~~~~~~~~D~~d~~~~~~~~---~~~~d~v 67 (219)
T 3dqp_A 2 KIFIVG-STGRVGKSLLKSLSTTDYQIYAGARKVEQVPQ---------Y-NNVKAVHFDVDWTPEEMAKQ---LHGMDAI 67 (219)
T ss_dssp EEEEES-TTSHHHHHHHHHHTTSSCEEEEEESSGGGSCC---------C-TTEEEEECCTTSCHHHHHTT---TTTCSEE
T ss_pred eEEEEC-CCCHHHHHHHHHHHHCCCEEEEEECCccchhh---------c-CCceEEEecccCCHHHHHHH---HcCCCEE
Confidence 688888 67888888888764 35799999998863321 1 46999999987612222211 3579999
Q ss_pred EEcCC
Q 025824 161 FVDAD 165 (247)
Q Consensus 161 ~id~~ 165 (247)
|..+.
T Consensus 68 i~~ag 72 (219)
T 3dqp_A 68 INVSG 72 (219)
T ss_dssp EECCC
T ss_pred EECCc
Confidence 87654
No 489
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=83.77 E-value=7 Score=28.13 Aligned_cols=88 Identities=13% Similarity=0.068 Sum_probs=51.2
Q ss_pred cCCCEEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCc
Q 025824 78 VNAKNTMEIGVYTGYSLLATALALP-DDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGS 156 (247)
Q Consensus 78 ~~~~~vLEiG~g~G~st~~la~~~~-~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~ 156 (247)
...++|+-||+ |..+..++..+. .+.+|+.+|.+++..+. ..+..+ +.+...+ .+... -..
T Consensus 19 ~~~~~v~iiG~--G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~---~a~~~~----~~~~~~~---~~~~~------~~~ 80 (144)
T 3oj0_A 19 NGGNKILLVGN--GMLASEIAPYFSYPQYKVTVAGRNIDHVRA---FAEKYE----YEYVLIN---DIDSL------IKN 80 (144)
T ss_dssp HCCCEEEEECC--SHHHHHHGGGCCTTTCEEEEEESCHHHHHH---HHHHHT----CEEEECS---CHHHH------HHT
T ss_pred ccCCEEEEECC--CHHHHHHHHHHHhCCCEEEEEcCCHHHHHH---HHHHhC----CceEeec---CHHHH------hcC
Confidence 34789999996 777777777764 34579999999876543 233333 2222221 12222 135
Q ss_pred eeEEEEcCCccchHHHHHHHHhcCCCCeEEE
Q 025824 157 FDFIFVDADKDNYLNYHKRLIELVKVGGVIG 187 (247)
Q Consensus 157 fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv 187 (247)
+|+|+.-.+..... +. ...+++|++++
T Consensus 81 ~Divi~at~~~~~~--~~--~~~l~~g~~vi 107 (144)
T 3oj0_A 81 NDVIITATSSKTPI--VE--ERSLMPGKLFI 107 (144)
T ss_dssp CSEEEECSCCSSCS--BC--GGGCCTTCEEE
T ss_pred CCEEEEeCCCCCcE--ee--HHHcCCCCEEE
Confidence 89998765533221 11 25678877665
No 490
>3ilh_A Two component response regulator; NYSGXRC, PSI-II, protein S initiative, structural genomics; 2.59A {Cytophaga hutchinsonii}
Probab=83.57 E-value=7.2 Score=27.33 Aligned_cols=84 Identities=11% Similarity=-0.072 Sum_probs=51.6
Q ss_pred CCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhhhHHHHhhhcCCCceeEEEEcCC--ccchHHHHHHHHh---
Q 025824 104 DGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDFIFVDAD--KDNYLNYHKRLIE--- 178 (247)
Q Consensus 104 ~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~l~~l~~~~~~~~~fD~v~id~~--~~~~~~~l~~~~~--- 178 (247)
..+|..+|-++......+..+...|... .-....+..+.+..+.........+|+|++|.. ..+-.++++.+.+
T Consensus 9 ~~~iLivdd~~~~~~~l~~~l~~~~~~~-~v~~~~~~~~a~~~l~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~ 87 (146)
T 3ilh_A 9 IDSVLLIDDDDIVNFLNTTIIRMTHRVE-EIQSVTSGNAAINKLNELYAAGRWPSIICIDINMPGINGWELIDLFKQHFQ 87 (146)
T ss_dssp EEEEEEECSCHHHHHHHHHHHHTTCCEE-EEEEESSHHHHHHHHHHHHTSSCCCSEEEEESSCSSSCHHHHHHHHHHHCG
T ss_pred cceEEEEeCCHHHHHHHHHHHHhcCCCe-eeeecCCHHHHHHHHHHhhccCCCCCEEEEcCCCCCCCHHHHHHHHHHhhh
Confidence 3589999999998888888888776421 122345565666555321001267999999976 2344566676665
Q ss_pred -cCCCCeEEEE
Q 025824 179 -LVKVGGVIGY 188 (247)
Q Consensus 179 -~L~~gG~lv~ 188 (247)
....--+|++
T Consensus 88 ~~~~~~~ii~~ 98 (146)
T 3ilh_A 88 PMKNKSIVCLL 98 (146)
T ss_dssp GGTTTCEEEEE
T ss_pred hccCCCeEEEE
Confidence 3333444544
No 491
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=83.56 E-value=2.6 Score=37.31 Aligned_cols=100 Identities=18% Similarity=0.224 Sum_probs=58.2
Q ss_pred CCCEEEEEcccccHHHHHHHhhCCC-CCEEEEEeCCcchHHHHHHH------------HHHcCCCCcEEEEEecchhhhH
Q 025824 79 NAKNTMEIGVYTGYSLLATALALPD-DGKILAMDINRENYELGLPV------------IQKAGVAHKIDFREGPALPVLD 145 (247)
Q Consensus 79 ~~~~vLEiG~g~G~st~~la~~~~~-~~~v~~iD~~~~~~~~a~~~------------~~~~g~~~~i~~~~gd~~~~l~ 145 (247)
..-+|--|| .|+.+..+|..+.. +-+|+++|++++.++..++. +++.-...++++ ..|..+.+
T Consensus 7 ~~~~~~vIG--lG~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~-ttd~~ea~- 82 (446)
T 4a7p_A 7 GSVRIAMIG--TGYVGLVSGACFSDFGHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSF-TTDLAEGV- 82 (446)
T ss_dssp CCCEEEEEC--CSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEE-ESCHHHHH-
T ss_pred CceEEEEEc--CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEE-ECCHHHHH-
Confidence 345677777 56777666665432 46899999999987665431 000000122333 12222221
Q ss_pred HHHhhhcCCCceeEEEEcCC--cc---------chHHHHHHHHhcCCCCeEEEEecc
Q 025824 146 LLIQDEKNHGSFDFIFVDAD--KD---------NYLNYHKRLIELVKVGGVIGYDNT 191 (247)
Q Consensus 146 ~l~~~~~~~~~fD~v~id~~--~~---------~~~~~l~~~~~~L~~gG~lv~d~~ 191 (247)
...|+||+--+ .. .....++.+.+.|++|.++|..-+
T Consensus 83 ---------~~aDvvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~g~iVV~~ST 130 (446)
T 4a7p_A 83 ---------KDADAVFIAVGTPSRRGDGHADLSYVFAAAREIAENLTKPSVIVTKST 130 (446)
T ss_dssp ---------TTCSEEEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCSCCEEEECSC
T ss_pred ---------hcCCEEEEEcCCCCccccCCccHHHHHHHHHHHHHhcCCCCEEEEeCC
Confidence 35699988633 11 255667778889999988876433
No 492
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=83.25 E-value=7.1 Score=31.21 Aligned_cols=85 Identities=15% Similarity=0.177 Sum_probs=52.9
Q ss_pred CCCEEEEEcc-cccHHHHHHHhhC-CCCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhh--hHHHHhhh-cC
Q 025824 79 NAKNTMEIGV-YTGYSLLATALAL-PDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPV--LDLLIQDE-KN 153 (247)
Q Consensus 79 ~~~~vLEiG~-g~G~st~~la~~~-~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~--l~~l~~~~-~~ 153 (247)
+.+++|-.|. |.| .+..+++.+ ..+.+|+.++.+++..+...+.+...+- .++.++..|..+. +..+.++- ..
T Consensus 21 ~~k~vlITGasg~G-IG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~~~ 98 (266)
T 3o38_A 21 KGKVVLVTAAAGTG-IGSTTARRALLEGADVVISDYHERRLGETRDQLADLGL-GRVEAVVCDVTSTEAVDALITQTVEK 98 (266)
T ss_dssp TTCEEEESSCSSSS-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCS-SCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCc-hHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCC-CceEEEEeCCCCHHHHHHHHHHHHHH
Confidence 5678999886 333 333333332 2367999999999888777777765442 4799999988652 22221100 01
Q ss_pred CCceeEEEEcCC
Q 025824 154 HGSFDFIFVDAD 165 (247)
Q Consensus 154 ~~~fD~v~id~~ 165 (247)
.+++|+++..+.
T Consensus 99 ~g~id~li~~Ag 110 (266)
T 3o38_A 99 AGRLDVLVNNAG 110 (266)
T ss_dssp HSCCCEEEECCC
T ss_pred hCCCcEEEECCC
Confidence 257899987654
No 493
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=83.21 E-value=22 Score=30.86 Aligned_cols=125 Identities=12% Similarity=0.075 Sum_probs=67.2
Q ss_pred CHHHHHHHHHHHhhcCCCEEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcch-HHHHHHHHHHcCCCCcEEEEEecchh
Q 025824 64 SADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINREN-YELGLPVIQKAGVAHKIDFREGPALP 142 (247)
Q Consensus 64 ~~~~~~~l~~l~~~~~~~~vLEiG~g~G~st~~la~~~~~~~~v~~iD~~~~~-~~~a~~~~~~~g~~~~i~~~~gd~~~ 142 (247)
.|....+-..++........+=+++|+......+...+.++.+|++.+..-.. .......+...|. ++.++..+-.+
T Consensus 81 ~p~~~~le~~lA~l~g~~~~v~~~sG~~Ai~~al~al~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~--~~~~v~~~d~~ 158 (430)
T 3ri6_A 81 NPTVEDLEQRLKNLTGALGVLALGSGMAAISTAILTLARAGDSVVTTDRLFGHTLSLFQKTLPSFGI--EVRFVDVMDSL 158 (430)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTHHHHTTC--EEEEECTTCHH
T ss_pred CHHHHHHHHHHHHHHCCCcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCC--EEEEeCCCCHH
Confidence 46667777777777777777777766644444444446656678776655432 2333345666665 34554433233
Q ss_pred hhHHHHhhhcCCCceeEEEEcCC--ccchHHHHHHHHhcCC-CCeEEEEecccccc
Q 025824 143 VLDLLIQDEKNHGSFDFIFVDAD--KDNYLNYHKRLIELVK-VGGVIGYDNTLWNG 195 (247)
Q Consensus 143 ~l~~l~~~~~~~~~fD~v~id~~--~~~~~~~l~~~~~~L~-~gG~lv~d~~~~~g 195 (247)
.+.... .....+|++..+ .......++.+.++.+ .|..+++|++...+
T Consensus 159 ~l~~ai-----~~~t~~v~~e~p~NptG~~~dl~~i~~la~~~g~~livD~a~~~~ 209 (430)
T 3ri6_A 159 AVEHAC-----DETTKLLFLETISNPQLQVADLEALSKVVHAKGIPLVVDTTMTPP 209 (430)
T ss_dssp HHHHHC-----CTTEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECTTSCT
T ss_pred HHHHhh-----CCCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCccc
Confidence 333332 345788887643 1111112233333333 46678888886433
No 494
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=83.20 E-value=12 Score=29.84 Aligned_cols=86 Identities=20% Similarity=0.103 Sum_probs=51.7
Q ss_pred CCCEEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhh--hHHHHhhh-cCC
Q 025824 79 NAKNTMEIGVYTGYSLLATALALP-DDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPV--LDLLIQDE-KNH 154 (247)
Q Consensus 79 ~~~~vLEiG~g~G~st~~la~~~~-~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~--l~~l~~~~-~~~ 154 (247)
..+++|-.|+ +|..+..+++.+. .+.+|+.++.+++..+...+.+.......++.++.+|..+. +..+.+.- ...
T Consensus 6 ~~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 84 (267)
T 2gdz_A 6 NGKVALVTGA-AQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF 84 (267)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECC-CCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence 4578898985 5666666666542 36799999999876655444443321123688888887642 22221100 002
Q ss_pred CceeEEEEcCC
Q 025824 155 GSFDFIFVDAD 165 (247)
Q Consensus 155 ~~fD~v~id~~ 165 (247)
+++|+++..+.
T Consensus 85 g~id~lv~~Ag 95 (267)
T 2gdz_A 85 GRLDILVNNAG 95 (267)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 47899987764
No 495
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=83.20 E-value=2.2 Score=33.20 Aligned_cols=73 Identities=15% Similarity=0.104 Sum_probs=48.0
Q ss_pred CEEEEEcccccHHHHHHHhhCC--CCCEEEEEeCCcc-hHHHHHHHHHHcCCCCcEEEEEecchhh--hHHHHhhhcCCC
Q 025824 81 KNTMEIGVYTGYSLLATALALP--DDGKILAMDINRE-NYELGLPVIQKAGVAHKIDFREGPALPV--LDLLIQDEKNHG 155 (247)
Q Consensus 81 ~~vLEiG~g~G~st~~la~~~~--~~~~v~~iD~~~~-~~~~a~~~~~~~g~~~~i~~~~gd~~~~--l~~l~~~~~~~~ 155 (247)
++||-+| ++|..+..+++.+. .+.+|++++.+++ .++... .. ..+++++.+|..+. +..+ -.
T Consensus 6 k~vlVtG-asg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~----~~--~~~~~~~~~D~~d~~~~~~~------~~ 72 (221)
T 3r6d_A 6 XYITILG-AAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI----ID--HERVTVIEGSFQNPGXLEQA------VT 72 (221)
T ss_dssp SEEEEES-TTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH----HT--STTEEEEECCTTCHHHHHHH------HT
T ss_pred EEEEEEe-CCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc----cC--CCceEEEECCCCCHHHHHHH------Hc
Confidence 4688888 56777777666543 4679999999876 432211 11 24689999998652 3333 24
Q ss_pred ceeEEEEcCCc
Q 025824 156 SFDFIFVDADK 166 (247)
Q Consensus 156 ~fD~v~id~~~ 166 (247)
.+|+||..+..
T Consensus 73 ~~d~vv~~ag~ 83 (221)
T 3r6d_A 73 NAEVVFVGAME 83 (221)
T ss_dssp TCSEEEESCCC
T ss_pred CCCEEEEcCCC
Confidence 68999987764
No 496
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=83.06 E-value=4.5 Score=34.50 Aligned_cols=96 Identities=13% Similarity=0.044 Sum_probs=58.8
Q ss_pred CCEEEEEcccccHHHHHHHhhCCC-CCEEEEEeCCcchHHHHHHHHH------HcCCCCcEEEEEecchhhhHHHHhhhc
Q 025824 80 AKNTMEIGVYTGYSLLATALALPD-DGKILAMDINRENYELGLPVIQ------KAGVAHKIDFREGPALPVLDLLIQDEK 152 (247)
Q Consensus 80 ~~~vLEiG~g~G~st~~la~~~~~-~~~v~~iD~~~~~~~~a~~~~~------~~g~~~~i~~~~gd~~~~l~~l~~~~~ 152 (247)
..+|.-||+ |..+..++..+.. +.+|+.++.+++.++..++.-. ...+..++++. .|..+. +
T Consensus 29 ~mkI~VIGa--G~mG~alA~~La~~G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t-~d~~ea---~----- 97 (356)
T 3k96_A 29 KHPIAILGA--GSWGTALALVLARKGQKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAY-CDLKAS---L----- 97 (356)
T ss_dssp CSCEEEECC--SHHHHHHHHHHHTTTCCEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEEE-SCHHHH---H-----
T ss_pred CCeEEEECc--cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEEE-CCHHHH---H-----
Confidence 457888986 5555555554432 4579999999887665544211 01111223331 222222 1
Q ss_pred CCCceeEEEEcCCccchHHHHHHHHhcCCCCeEEEE
Q 025824 153 NHGSFDFIFVDADKDNYLNYHKRLIELVKVGGVIGY 188 (247)
Q Consensus 153 ~~~~fD~v~id~~~~~~~~~l~~~~~~L~~gG~lv~ 188 (247)
...|+||+-.+.......++.+.+.++++.+++.
T Consensus 98 --~~aDvVilaVp~~~~~~vl~~i~~~l~~~~ivvs 131 (356)
T 3k96_A 98 --EGVTDILIVVPSFAFHEVITRMKPLIDAKTRIAW 131 (356)
T ss_dssp --TTCCEEEECCCHHHHHHHHHHHGGGCCTTCEEEE
T ss_pred --hcCCEEEECCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 4679999987766677788888899999887663
No 497
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=82.97 E-value=6.3 Score=34.20 Aligned_cols=90 Identities=17% Similarity=0.059 Sum_probs=55.1
Q ss_pred CEEEEEcccccHHHHHHHhhCCCC----CEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchh--hhHHHHhhhcCC
Q 025824 81 KNTMEIGVYTGYSLLATALALPDD----GKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALP--VLDLLIQDEKNH 154 (247)
Q Consensus 81 ~~vLEiG~g~G~st~~la~~~~~~----~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~--~l~~l~~~~~~~ 154 (247)
++|+-+|+ |+.+..+++.+... .+|+.++.+++.++...+.+...+ ..++..+..|..+ .+..+.++
T Consensus 2 ~kVlIiGa--GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~-~~~~~~~~~D~~d~~~l~~~l~~---- 74 (405)
T 4ina_A 2 AKVLQIGA--GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKG-YGEIDITTVDADSIEELVALINE---- 74 (405)
T ss_dssp CEEEEECC--SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTT-CCCCEEEECCTTCHHHHHHHHHH----
T ss_pred CEEEEECC--CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhc-CCceEEEEecCCCHHHHHHHHHh----
Confidence 47888987 56777766654322 389999999987766555554432 1357788888753 34444321
Q ss_pred CceeEEEEcCCccchHHHHHHHH
Q 025824 155 GSFDFIFVDADKDNYLNYHKRLI 177 (247)
Q Consensus 155 ~~fD~v~id~~~~~~~~~l~~~~ 177 (247)
...|+|+..+.........+.+.
T Consensus 75 ~~~DvVin~ag~~~~~~v~~a~l 97 (405)
T 4ina_A 75 VKPQIVLNIALPYQDLTIMEACL 97 (405)
T ss_dssp HCCSEEEECSCGGGHHHHHHHHH
T ss_pred hCCCEEEECCCcccChHHHHHHH
Confidence 14899987766433344444444
No 498
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=82.96 E-value=1.9 Score=38.00 Aligned_cols=97 Identities=15% Similarity=0.217 Sum_probs=53.6
Q ss_pred CCEEEEEcccccHHHHHHHhhCCC-CCEEEEEeCCcchHHHHHHH------------HHHcCCCCcEEEEEecchhhhHH
Q 025824 80 AKNTMEIGVYTGYSLLATALALPD-DGKILAMDINRENYELGLPV------------IQKAGVAHKIDFREGPALPVLDL 146 (247)
Q Consensus 80 ~~~vLEiG~g~G~st~~la~~~~~-~~~v~~iD~~~~~~~~a~~~------------~~~~g~~~~i~~~~gd~~~~l~~ 146 (247)
..+.--|| .|+.+..+|..+.. +-+|+++|++++.++..++. +++.-...++.+- .|
T Consensus 11 ~~~~~ViG--lGyvGlp~A~~La~~G~~V~~~D~~~~kv~~L~~g~~pi~epgl~~ll~~~~~~g~l~~t-td------- 80 (431)
T 3ojo_A 11 GSKLTVVG--LGYIGLPTSIMFAKHGVDVLGVDINQQTIDKLQNGQISIEEPGLQEVYEEVLSSGKLKVS-TT------- 80 (431)
T ss_dssp -CEEEEEC--CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEE-SS-------
T ss_pred CCccEEEe--eCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHhhcccCceEEe-Cc-------
Confidence 34555566 56666666655432 46899999999877665431 1100000122221 11
Q ss_pred HHhhhcCCCceeEEEEcCCcc------------chHHHHHHHHhcCCCCeEEEEecccc
Q 025824 147 LIQDEKNHGSFDFIFVDADKD------------NYLNYHKRLIELVKVGGVIGYDNTLW 193 (247)
Q Consensus 147 l~~~~~~~~~fD~v~id~~~~------------~~~~~l~~~~~~L~~gG~lv~d~~~~ 193 (247)
....|+||+.-+.. ......+.+.+.|++|.++|..-+..
T Consensus 81 -------~~~aDvvii~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iVV~~STV~ 132 (431)
T 3ojo_A 81 -------PEASDVFIIAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTIIVESTIA 132 (431)
T ss_dssp -------CCCCSEEEECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEEEECSCCC
T ss_pred -------hhhCCEEEEEeCCCccccccCCccHHHHHHHHHHHHHhCCCCCEEEEecCCC
Confidence 12468888754311 13445567778899998877654443
No 499
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=82.84 E-value=5.9 Score=31.88 Aligned_cols=83 Identities=13% Similarity=0.029 Sum_probs=55.4
Q ss_pred CCCEEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhh--hHHHHhhhcCCC
Q 025824 79 NAKNTMEIGVYTGYSLLATALALP-DDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPV--LDLLIQDEKNHG 155 (247)
Q Consensus 79 ~~~~vLEiG~g~G~st~~la~~~~-~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~--l~~l~~~~~~~~ 155 (247)
..+++|-.|++ |..+..+++.+. .+.+|+.++.+++..+...+.+...+...++.++..|..+. +..+.++ .+
T Consensus 9 ~~k~~lVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~---~g 84 (267)
T 3t4x_A 9 KGKTALVTGST-AGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEK---YP 84 (267)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHH---CC
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHh---cC
Confidence 45788888854 556666665542 36799999999988777766666654445678888887542 2333222 35
Q ss_pred ceeEEEEcCC
Q 025824 156 SFDFIFVDAD 165 (247)
Q Consensus 156 ~fD~v~id~~ 165 (247)
.+|+++..+.
T Consensus 85 ~id~lv~nAg 94 (267)
T 3t4x_A 85 KVDILINNLG 94 (267)
T ss_dssp CCSEEEECCC
T ss_pred CCCEEEECCC
Confidence 7999987653
No 500
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=82.83 E-value=6.5 Score=31.92 Aligned_cols=84 Identities=15% Similarity=0.180 Sum_probs=53.6
Q ss_pred CCCEEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCcchHHHHHHHHHHcCCCCcEEEEEecchhh--hHHHHhhh-cCC
Q 025824 79 NAKNTMEIGVYTGYSLLATALALP-DDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPV--LDLLIQDE-KNH 154 (247)
Q Consensus 79 ~~~~vLEiG~g~G~st~~la~~~~-~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd~~~~--l~~l~~~~-~~~ 154 (247)
..+++|-.|++ |..+..+++.+. .+.+|+.++.+++.++.+.+.+...+ .++.++..|..+. +..+.++- ...
T Consensus 23 ~~k~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 99 (279)
T 3sju_A 23 RPQTAFVTGVS-SGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAG--HDVDGSSCDVTSTDEVHAAVAAAVERF 99 (279)
T ss_dssp --CEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT--CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 46789999954 555566555542 36799999999988877777776654 4688899887642 22221100 012
Q ss_pred CceeEEEEcCC
Q 025824 155 GSFDFIFVDAD 165 (247)
Q Consensus 155 ~~fD~v~id~~ 165 (247)
+++|+++..+.
T Consensus 100 g~id~lv~nAg 110 (279)
T 3sju_A 100 GPIGILVNSAG 110 (279)
T ss_dssp CSCCEEEECCC
T ss_pred CCCcEEEECCC
Confidence 57899987653
Done!