Query 025826
Match_columns 247
No_of_seqs 157 out of 344
Neff 5.1
Searched_HMMs 29240
Date Mon Mar 25 18:26:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025826.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025826hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2i7n_A Pantothenate kinase 1; 100.0 1.9E-64 6.6E-69 472.9 16.0 217 19-247 1-253 (360)
2 2ews_A Pantothenate kinase; PA 100.0 5.1E-42 1.7E-46 312.5 18.3 170 18-246 17-186 (287)
3 1hux_A Activator of (R)-2-hydr 98.5 2.9E-06 1E-10 75.1 15.0 143 22-227 4-157 (270)
4 4ehu_A Activator of 2-hydroxyi 98.3 4.4E-05 1.5E-09 66.5 16.9 146 21-228 1-156 (276)
5 2gup_A ROK family protein; sug 96.8 0.12 4.2E-06 44.8 17.7 116 21-186 4-137 (292)
6 2ch5_A NAGK protein; transfera 96.5 0.078 2.7E-06 47.0 14.9 58 112-196 89-149 (347)
7 2ivn_A O-sialoglycoprotein end 96.4 0.18 6.3E-06 45.4 16.7 104 101-228 70-184 (330)
8 3vgl_A Glucokinase; ROK family 96.3 0.15 5E-06 45.3 15.6 55 112-186 87-141 (321)
9 2aa4_A Mannac kinase, putative 96.3 0.31 1.1E-05 42.0 17.1 119 22-186 2-140 (289)
10 3epq_A Putative fructokinase; 95.9 0.17 5.8E-06 44.9 13.8 118 21-185 3-141 (302)
11 1saz_A Probable butyrate kinas 95.6 0.42 1.4E-05 43.8 15.8 17 23-39 4-20 (381)
12 1z05_A Transcriptional regulat 95.6 0.42 1.4E-05 44.2 15.7 55 112-186 199-253 (429)
13 3r8e_A Hypothetical sugar kina 95.5 0.46 1.6E-05 42.1 14.9 56 111-186 107-163 (321)
14 3djc_A Type III pantothenate k 95.4 0.26 8.9E-06 43.8 13.2 30 168-199 125-154 (266)
15 2qm1_A Glucokinase; alpha-beta 95.4 0.39 1.4E-05 41.9 14.1 55 112-186 99-153 (326)
16 2ap1_A Putative regulator prot 95.3 0.86 2.9E-05 40.1 16.0 54 113-186 112-165 (327)
17 3vov_A Glucokinase, hexokinase 95.2 0.63 2.2E-05 40.9 15.0 54 112-185 89-142 (302)
18 1z6r_A MLC protein; transcript 95.0 0.38 1.3E-05 43.9 13.3 56 111-186 176-231 (406)
19 3bex_A Type III pantothenate k 95.0 0.18 6.2E-06 44.1 10.7 28 168-198 122-149 (249)
20 1sz2_A Glucokinase, glucose ki 94.7 0.15 5.2E-06 45.4 9.5 138 16-181 9-152 (332)
21 2e2o_A Hexokinase; acetate and 94.5 0.27 9.2E-06 42.7 10.5 105 23-179 4-118 (299)
22 4htl_A Beta-glucoside kinase; 94.4 1 3.5E-05 39.4 13.9 56 111-186 87-142 (297)
23 1zbs_A Hypothetical protein PG 94.1 1.1 3.9E-05 38.9 13.6 124 23-195 2-136 (291)
24 4db3_A Glcnac kinase, N-acetyl 93.8 1.2 4.2E-05 39.5 13.4 127 22-186 25-165 (327)
25 3mcp_A Glucokinase; structural 93.4 1.5 5E-05 40.4 13.7 65 112-184 99-164 (366)
26 2hoe_A N-acetylglucosamine kin 93.3 1.2 4E-05 40.5 12.7 53 112-186 179-231 (380)
27 1woq_A Inorganic polyphosphate 92.5 4.5 0.00015 34.5 15.3 60 112-192 105-165 (267)
28 2h3g_X Biosynthetic protein; p 92.3 2.3 7.7E-05 37.6 12.8 29 168-198 123-151 (268)
29 2yhw_A Bifunctional UDP-N-acet 92.0 1.2 4.2E-05 39.4 10.7 56 111-186 121-176 (343)
30 1zc6_A Probable N-acetylglucos 90.0 6 0.00021 34.3 13.1 18 22-39 12-29 (305)
31 1zxo_A Conserved hypothetical 88.3 1.1 3.8E-05 39.0 7.0 57 112-195 75-134 (291)
32 3htv_A D-allose kinase, alloki 88.0 2.8 9.6E-05 37.0 9.6 52 112-184 98-149 (310)
33 2f9w_A Pantothenate kinase; CO 77.6 28 0.00096 30.7 11.7 29 168-198 138-166 (271)
34 3h1q_A Ethanolamine utilizatio 76.3 33 0.0011 28.6 15.2 41 170-210 141-182 (272)
35 4apw_A ALP12; actin-like prote 76.0 4.2 0.00014 36.3 5.9 43 101-143 280-323 (329)
36 2yhx_A Hexokinase B; transfera 67.6 8.9 0.00031 36.4 6.3 23 18-40 58-80 (457)
37 1cza_N Hexokinase type I; stru 65.0 8.1 0.00028 39.7 5.8 23 18-40 75-97 (917)
38 3lm2_A Putative kinase; struct 64.6 11 0.00036 32.3 5.7 49 117-192 87-135 (226)
39 3eno_A Putative O-sialoglycopr 60.8 34 0.0012 30.6 8.6 103 101-228 75-190 (334)
40 1bdg_A Hexokinase; phosphotran 58.8 16 0.00055 34.4 6.2 22 19-40 66-87 (451)
41 3o8m_A Hexokinase; rnaseh-like 56.6 14 0.00049 35.4 5.5 23 19-41 78-100 (485)
42 2q2r_A Glucokinase 1, putative 56.2 12 0.00041 33.5 4.7 31 112-142 118-149 (373)
43 2fsj_A Hypothetical protein TA 52.1 9.6 0.00033 34.1 3.4 43 101-143 298-343 (346)
44 2w40_A Glycerol kinase, putati 49.9 36 0.0012 31.9 7.0 18 23-40 6-23 (503)
45 2itm_A Xylulose kinase, xylulo 48.0 35 0.0012 31.7 6.6 18 23-40 2-19 (484)
46 2dpn_A Glycerol kinase; thermu 44.8 45 0.0015 31.1 6.9 18 23-40 4-21 (495)
47 2zgy_A Plasmid segregation pro 43.2 16 0.00056 31.8 3.4 40 101-140 274-317 (320)
48 1jce_A ROD shape-determining p 43.0 16 0.00055 31.9 3.3 42 102-143 280-324 (344)
49 2zf5_O Glycerol kinase; hypert 42.6 50 0.0017 30.8 6.8 18 23-40 5-22 (497)
50 2ych_A Competence protein PILM 39.8 30 0.001 30.4 4.6 34 101-134 308-343 (377)
51 3l0q_A Xylulose kinase; xlylul 39.6 31 0.0011 32.8 4.9 42 101-142 444-487 (554)
52 3h6e_A Carbohydrate kinase, FG 38.9 63 0.0021 30.4 6.9 17 23-39 8-24 (482)
53 3i8b_A Xylulose kinase; strain 38.0 36 0.0012 32.2 5.1 42 101-142 426-469 (515)
54 2d4w_A Glycerol kinase; alpha 37.2 69 0.0024 29.9 6.9 18 23-40 4-21 (504)
55 2uyt_A Rhamnulokinase; rhamnos 37.1 19 0.00066 33.4 3.0 19 23-41 6-24 (489)
56 3ll3_A Gluconate kinase; xylul 37.0 37 0.0013 31.9 5.0 42 101-142 395-438 (504)
57 3ifr_A Carbohydrate kinase, FG 35.9 38 0.0013 31.9 4.8 42 101-142 402-445 (508)
58 3js6_A Uncharacterized PARM pr 35.6 14 0.00048 33.4 1.7 40 101-143 292-335 (355)
59 1dkg_D Molecular chaperone DNA 35.5 62 0.0021 28.5 5.9 42 101-142 335-379 (383)
60 3qfu_A 78 kDa glucose-regulate 35.3 61 0.0021 28.4 5.8 42 101-142 345-390 (394)
61 3ifr_A Carbohydrate kinase, FG 35.1 27 0.00093 32.9 3.7 56 170-225 260-333 (508)
62 3ll3_A Gluconate kinase; xylul 35.1 21 0.00072 33.6 2.9 58 170-227 254-328 (504)
63 2wq4_A Lectin; LUNG, pathogen, 35.0 30 0.001 27.8 3.3 43 146-197 70-115 (156)
64 4gni_A Putative heat shock pro 32.3 54 0.0018 29.3 5.0 43 101-143 346-399 (409)
65 3en9_A Glycoprotease, O-sialog 32.1 2.9E+02 0.01 25.8 10.4 91 114-227 95-188 (540)
66 3ezw_A Glycerol kinase; glycer 30.4 51 0.0017 31.1 4.7 42 101-142 404-447 (526)
67 3i33_A Heat shock-related 70 k 29.8 88 0.003 27.7 6.0 43 101-143 353-399 (404)
68 3jvp_A Ribulokinase; PSI-II, N 29.2 51 0.0017 31.5 4.5 41 101-141 441-484 (572)
69 3h3n_X Glycerol kinase; ATP-bi 28.4 33 0.0011 32.3 3.0 20 22-41 6-25 (506)
70 3g25_A Glycerol kinase; IDP007 28.4 60 0.0021 30.3 4.8 42 101-142 406-449 (501)
71 4e1j_A Glycerol kinase; struct 28.2 31 0.0011 32.7 2.8 18 23-40 28-45 (520)
72 2p3r_A Glycerol kinase; glycer 28.1 61 0.0021 30.4 4.8 42 101-142 403-446 (510)
73 1vhx_A Putative holliday junct 28.1 49 0.0017 26.4 3.6 32 111-142 79-110 (150)
74 3g25_A Glycerol kinase; IDP007 27.9 32 0.0011 32.3 2.8 19 23-41 8-26 (501)
75 3qfu_A 78 kDa glucose-regulate 27.9 35 0.0012 30.1 2.9 36 168-204 206-247 (394)
76 2itm_A Xylulose kinase, xylulo 27.8 61 0.0021 30.0 4.7 41 101-141 388-431 (484)
77 3i8b_A Xylulose kinase; strain 27.2 35 0.0012 32.3 3.0 55 170-226 288-358 (515)
78 2p3r_A Glycerol kinase; glycer 26.6 34 0.0012 32.2 2.8 20 22-41 4-23 (510)
79 3l0q_A Xylulose kinase; xlylul 26.5 37 0.0013 32.3 3.0 20 22-41 6-25 (554)
80 3h3n_X Glycerol kinase; ATP-bi 25.8 72 0.0025 29.8 4.9 42 101-142 405-448 (506)
81 4e1j_A Glycerol kinase; struct 25.4 64 0.0022 30.4 4.4 42 101-142 427-470 (520)
82 3cet_A Conserved archaeal prot 25.4 51 0.0017 30.3 3.6 18 22-39 1-18 (334)
83 3h1q_A Ethanolamine utilizatio 24.9 55 0.0019 27.2 3.5 38 101-138 228-268 (272)
84 3hz6_A Xylulokinase; xylulose, 24.9 38 0.0013 31.9 2.8 19 23-41 7-25 (511)
85 2zf5_O Glycerol kinase; hypert 24.5 43 0.0015 31.2 3.0 42 101-142 395-438 (497)
86 3jvp_A Ribulokinase; PSI-II, N 24.4 42 0.0014 32.1 3.0 19 22-40 6-24 (572)
87 1cza_N Hexokinase type I; stru 24.2 63 0.0021 33.1 4.4 23 18-40 523-545 (917)
88 2ko4_A Mediator of RNA polymer 22.8 11 0.00039 28.0 -1.1 29 212-240 35-64 (81)
89 3i33_A Heat shock-related 70 k 22.5 55 0.0019 29.0 3.2 21 20-40 22-42 (404)
90 2zgy_A Plasmid segregation pro 22.3 50 0.0017 28.6 2.9 43 168-210 164-210 (320)
91 2d4w_A Glycerol kinase; alpha 21.4 59 0.002 30.4 3.3 42 101-142 405-448 (504)
92 1v8d_A Hypothetical protein (T 21.2 30 0.001 30.4 1.1 12 23-34 168-179 (235)
93 2dpn_A Glycerol kinase; thermu 21.0 52 0.0018 30.6 2.8 42 101-142 400-443 (495)
94 3hz6_A Xylulokinase; xylulose, 21.0 69 0.0024 30.1 3.7 42 101-142 404-448 (511)
95 1iv0_A Hypothetical protein; r 20.6 99 0.0034 22.9 3.8 19 22-40 2-20 (98)
No 1
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=100.00 E-value=1.9e-64 Score=472.91 Aligned_cols=217 Identities=35% Similarity=0.636 Sum_probs=171.2
Q ss_pred CCCCeEEEEcCcceeEEEEEeecCCC----CCC----cc------------CCCCCCC---------CCCCCeEEEEEee
Q 025826 19 SQISHLALDIGGSLIKVVYFLRSNGS----GGS----VD------------DSGKKSD---------PVLEGRLHFAKFE 69 (247)
Q Consensus 19 ~~~~~~giDIGGSL~KlvYf~~~~~~----~~~----~~------------~~~~~~~---------~~~~g~l~F~~F~ 69 (247)
+++|||||||||||+|||||+|.+.. .+. ++ .+|.|+. ..++|+|||++||
T Consensus 1 ~~~~~~~iDiGGtL~Klvy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~F~~f~ 80 (360)
T 2i7n_A 1 PPFPWFGMDIGGTLVKLVYFEPKDITAEEEQEEVENLKSIRKYLTSNTAYGKTGIRDVHLELKNLTMCGRKGNLHFIRFP 80 (360)
T ss_dssp --CCEEEEEECSSEEEEEEEEECC------------CCSHHHHHHHCSBCSSSCEECGGGCEEEEEC--CEEEEEEEEEE
T ss_pred CCCCEEEEEeCCceEEEEEEeecCCccccccccccccccchhhccccccccccCccccccccccccccCcCceEEEEEee
Confidence 46899999999999999999996521 110 00 2344442 2346999999999
Q ss_pred ccCHHHHHHHHHhhcccccCccccCCCCCCceEEEEecCCcccchHHHHHHhCCccceehhhhhhhhhHHHHH---hhcC
Q 025826 70 TSKIIDCLEFIRSKNLHLAGFRHHDASASDKTLIKATGGGAYKFADLIKEKLGVVLDKEDEMDCLVTGANFLL---KAVH 146 (247)
Q Consensus 70 t~~i~~~i~fi~~~~~~~~~~~~~~~~~~~~~~i~~TGGga~k~~~~~~~~lg~~~~k~dEm~cli~G~~fLl---~~i~ 146 (247)
|++|++|++|++++++... ...|++|||||+||++.|++++++++.|+|||+|+++|++||+ .++|
T Consensus 81 t~~~~~~l~~~~~~~~~~~-----------~~~i~aTGgGa~k~~~~~~~~~g~~~~k~dE~~c~~~G~~~l~~~~~~~~ 149 (360)
T 2i7n_A 81 SCAMHRFIQMGSEKNFSSL-----------HTTLCATGGGAFKFEEDFRMIADLQLHKLDELDCLIQGLLYVDSVGFNGK 149 (360)
T ss_dssp GGGHHHHHHHC-----------------------CEESTTTTGGGTTC-------CCBCCHHHHHHHHHHHHHHHCBTTB
T ss_pred hhhHHHHHHHHHHcCCCcc-----------CcEEEEECCcHHHHHHHHHHHhCCCcceecHHHHHHHHHHHHhcccccCC
Confidence 9999999999988765421 2579999999999999999999999999999999999999999 5789
Q ss_pred CcceEeeCCCe----eeeecCCCCCccEEEEecCCceEEEEEeCCCceEEeeccccCchhHHhhhhhhcCCCCHHHHHHH
Q 025826 147 QEAFTYVDGQK----EFVQIDQNDLYPYLLVNIGSGVSMIKVDGDGKFERISGTSVGGGTFWGLGRLLTNCKSFDELLEL 222 (247)
Q Consensus 147 ~e~f~~~~~~~----~~~~~~~~~~~PyLlVNIGSGvSi~kv~~~~~~~RVgGssiGGGT~~GL~~LLtg~~~fdeil~l 222 (247)
.|+|+|++... ...+.+..++||||||||||||||++|+++++|+|||||++||||||||++||||+.||||+++|
T Consensus 150 ~e~~t~~~~~~~~~~~~~~~~~~~~~PyllVnIGsGvSiikv~~~~~f~rvgG~siGGGTflGL~~lLtg~~~~dEl~~l 229 (360)
T 2i7n_A 150 PECYYFENPTNPELCQKKPYCLDNPYPMLLVNMGSGVSILAVYSKDNYKRVTGTSLGGGTFLGLCCLLTGCETFEEALEM 229 (360)
T ss_dssp CSEEEEESTTCTTTCEEEEECCSSCCSEEEEEESSSEEEEEEEETTEEEEEEEESCSHHHHHHHHHHHHCCCSHHHHHHH
T ss_pred ceeEEeccccccccccccccccccCCceEEEEeCCCcEEEEEcCCCCEEEeccccCccHhHHHHHHHHhCCCCHHHHHHH
Confidence 99999987542 23455667889999999999999999999889999999999999999999999999999999999
Q ss_pred HhCCCCCcCceEeeeecCCCCCcCC
Q 025826 223 SHQGNNRVIDMLVGDIYGGSEYSKV 247 (247)
Q Consensus 223 A~~Gd~~~vDmlV~DIYGg~dY~ki 247 (247)
|++||+++|||+|+||||+ +|+++
T Consensus 230 A~~Gd~~~vDllV~DIYg~-~y~~~ 253 (360)
T 2i7n_A 230 AAKGDSTNVDKLVKDIYGG-DYERF 253 (360)
T ss_dssp HHHCCGGGTSEEHHHHHSS-CBGGG
T ss_pred HHcCCCCcccceeeecccC-ccccc
Confidence 9999999999999999996 99864
No 2
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=100.00 E-value=5.1e-42 Score=312.50 Aligned_cols=170 Identities=28% Similarity=0.463 Sum_probs=145.1
Q ss_pred CCCCCeEEEEcCcceeEEEEEeecCCCCCCccCCCCCCCCCCCCeEEEEEeeccCHHHHHHHHHhhcccccCccccCCCC
Q 025826 18 ESQISHLALDIGGSLIKVVYFLRSNGSGGSVDDSGKKSDPVLEGRLHFAKFETSKIIDCLEFIRSKNLHLAGFRHHDASA 97 (247)
Q Consensus 18 ~~~~~~~giDIGGSL~KlvYf~~~~~~~~~~~~~~~~~~~~~~g~l~F~~F~t~~i~~~i~fi~~~~~~~~~~~~~~~~~ 97 (247)
.....++|||||+|++|+||++ .++++|.+|++.++++++++++..
T Consensus 17 ~~~~~~iGIDiGsTt~K~V~~~--------------------~~~i~~~~~~~~~~~~~l~~l~~~-------------- 62 (287)
T 2ews_A 17 RGSHMKVGIDAGGTLIKIVQEQ--------------------DNQRTFKTELTKNIDQVVEWLNQQ-------------- 62 (287)
T ss_dssp ----CEEEEEECSSEEEEEEEC--------------------SSCEEEEEEEGGGHHHHHHHHHTS--------------
T ss_pred CCCCeEEEEEEChhhEEEEEEc--------------------CCEEEEEEechHHHHHHHHHhccc--------------
Confidence 5678999999999999999974 256999999999999999998421
Q ss_pred CCceEEEEecCCcccchHHHHHHhCCccceehhhhhhhhhHHHHHhhcCCcceEeeCCCeeeeecCCCCCccEEEEecCC
Q 025826 98 SDKTLIKATGGGAYKFADLIKEKLGVVLDKEDEMDCLVTGANFLLKAVHQEAFTYVDGQKEFVQIDQNDLYPYLLVNIGS 177 (247)
Q Consensus 98 ~~~~~i~~TGGga~k~~~~~~~~lg~~~~k~dEm~cli~G~~fLl~~i~~e~f~~~~~~~~~~~~~~~~~~PyLlVNIGS 177 (247)
+...|++||+|++++.+ .+++++.+++||+|+++|+.||...++ .+++||++||||+
T Consensus 63 -~~~~i~~TG~G~~~~~~----~l~~~~~~v~Ei~~~~~Ga~~l~~~~~------------------~~~~~~~vIdIGg 119 (287)
T 2ews_A 63 -QIEKLCLTGGNAGVIAE----NINIPAQIFVEFDAASQGLGILLKEQG------------------HDLADYIFANVGT 119 (287)
T ss_dssp -CCSEEEEESTTHHHHHT----TSSSCCEECCHHHHHHHHHHHHHHHTT------------------CCCSCEEEEEESS
T ss_pred -CceEEEEEChhHHhHhH----hhCCCcceeehhHHHHHHHHHhcccCC------------------CCcCCeEEEEeCC
Confidence 12569999999999976 578899999999999999999997654 5689999999999
Q ss_pred ceEEEEEeCCCceEEeeccccCchhHHhhhhhhcCCCCHHHHHHHHhCCCCCcCceEeeeecCCCCCcC
Q 025826 178 GVSMIKVDGDGKFERISGTSVGGGTFWGLGRLLTNCKSFDELLELSHQGNNRVIDMLVGDIYGGSEYSK 246 (247)
Q Consensus 178 GvSi~kv~~~~~~~RVgGssiGGGT~~GL~~LLtg~~~fdeil~lA~~Gd~~~vDmlV~DIYGg~dY~k 246 (247)
|+|+++|+ +++|+|++||++||||||||+++|+++.+|+|+.+||++||+++|||+|+|||++ +|..
T Consensus 120 ~dsii~v~-~~~f~r~~g~aaGgGtFl~l~a~ll~~~~~~el~~lA~~g~~~~vDl~v~DIy~~-~~~~ 186 (287)
T 2ews_A 120 GTSLHYFD-GQSQRRVGGIGTGGGMIQGLGYLLSQITDYKQLTDMAQHGDRNTIDLKVRHIYKD-TEPP 186 (287)
T ss_dssp SEEEEEEC-SSCEEEEEEESCSHHHHHHHHHHHHCCCCHHHHHHHHTTCCCTTTCEETTTC--------
T ss_pred CeEEEEEc-CCceEEcCccccchhhHHHHHHHHhCCCCHHHHHHHHHcCCccccccchhhhcCC-CCCC
Confidence 99999998 5799999999999999999999999999999999999999999999999999995 6753
No 3
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=98.50 E-value=2.9e-06 Score=75.13 Aligned_cols=143 Identities=19% Similarity=0.350 Sum_probs=88.1
Q ss_pred CeEEEEcCcceeEEEEEeecCCCCCCccCCCCCCCCCCCCeEEEEE-eecc-----CHHHHHHHHHhhcccccCccccCC
Q 025826 22 SHLALDIGGSLIKVVYFLRSNGSGGSVDDSGKKSDPVLEGRLHFAK-FETS-----KIIDCLEFIRSKNLHLAGFRHHDA 95 (247)
Q Consensus 22 ~~~giDIGGSL~KlvYf~~~~~~~~~~~~~~~~~~~~~~g~l~F~~-F~t~-----~i~~~i~fi~~~~~~~~~~~~~~~ 95 (247)
..+|||+|+|.+|+|-+.. .|++-+.. .++. .+.++++.+.+..+...
T Consensus 4 ~~lGiD~Gst~~k~~l~d~-------------------~g~i~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~------- 57 (270)
T 1hux_A 4 YTLGIDVGSTASKCIILKD-------------------GKEIVAKSLVAVGTGTSGPARSISEVLENAHMKKE------- 57 (270)
T ss_dssp EEEEEEECSSEEEEEEEET-------------------TTEEEEEEEEECCSSCCHHHHHHHHHHHHHTCCGG-------
T ss_pred EEEEEEeccceEEEEEEeC-------------------CCCEEEEEEecCCCCHHHHHHHHHHHHHHcCCChh-------
Confidence 4699999999999999872 23333332 2222 13334443322111111
Q ss_pred CCCCceEEEEecCCcccchHHHHHHhCCccceehhhhhhhhhHHHHHhhcCCcceEeeCCCeeeeecCCCCCccEEEEec
Q 025826 96 SASDKTLIKATGGGAYKFADLIKEKLGVVLDKEDEMDCLVTGANFLLKAVHQEAFTYVDGQKEFVQIDQNDLYPYLLVNI 175 (247)
Q Consensus 96 ~~~~~~~i~~TGGga~k~~~~~~~~lg~~~~k~dEm~cli~G~~fLl~~i~~e~f~~~~~~~~~~~~~~~~~~PyLlVNI 175 (247)
....+.+||-|...... + ....++|+.|..+|+.++.... . .++.|
T Consensus 58 ---~i~~i~~TG~g~~~~~~-----~--~~~~v~Ei~ah~~ga~~~~~~~-------------------~-----~vidi 103 (270)
T 1hux_A 58 ---DMAFTLATGYGRNSLEG-----I--ADKQMSELSCHAMGASFIWPNV-------------------H-----TVIDI 103 (270)
T ss_dssp ---GCSEEEEESTTTTTTTT-----T--CSEEECHHHHHHHHHHHHCTTC-------------------C-----EEEEE
T ss_pred ---HEEEEEEeCccccchhh-----c--CCCCcccHHHHHHHHHHhCCCC-------------------C-----EEEEE
Confidence 12468999977644432 2 3345999999999998885311 1 57999
Q ss_pred CCceE-EEEEeCCCceE--Eeecc-ccCch-hHHhhhhhhcCCCCHHHHHHHHhCCC
Q 025826 176 GSGVS-MIKVDGDGKFE--RISGT-SVGGG-TFWGLGRLLTNCKSFDELLELSHQGN 227 (247)
Q Consensus 176 GSGvS-i~kv~~~~~~~--RVgGs-siGGG-T~~GL~~LLtg~~~fdeil~lA~~Gd 227 (247)
|.+.+ ++.+.+ +... +.+.. +-|.| ++.-++++| |. +++|+.++|.++.
T Consensus 104 GGqd~k~i~~~~-g~v~~~~mn~~ca~GtG~~le~~a~~l-g~-~~~el~~la~~~~ 157 (270)
T 1hux_A 104 GGQDVKVIHVEN-GTMTNFQMNDKCAAGTGRFLDVMANIL-EV-KVSDLAELGAKST 157 (270)
T ss_dssp ETTEEEEEEEET-TEEEEEEEESSCCTTSHHHHHHHHHHH-TC-CTTTHHHHHTTCC
T ss_pred CCCceEEEEEeC-CceeeeccccccchhhHHHHHHHHHHh-CC-CHHHHHHHHhhCC
Confidence 99777 888854 5432 33442 22334 677777777 64 6899999998765
No 4
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=98.27 E-value=4.4e-05 Score=66.53 Aligned_cols=146 Identities=21% Similarity=0.322 Sum_probs=92.2
Q ss_pred CCeEEEEcCcceeEEEEEeecCCCCCCccCCCCCCCCCCCCeEEEEEeeccC-----HHHHHHHHHhh-cccccCccccC
Q 025826 21 ISHLALDIGGSLIKVVYFLRSNGSGGSVDDSGKKSDPVLEGRLHFAKFETSK-----IIDCLEFIRSK-NLHLAGFRHHD 94 (247)
Q Consensus 21 ~~~~giDIGGSL~KlvYf~~~~~~~~~~~~~~~~~~~~~~g~l~F~~F~t~~-----i~~~i~fi~~~-~~~~~~~~~~~ 94 (247)
|..+|||+|+|.+|+|.+. .++++-+..+.++. ..++++-+.+. +....
T Consensus 1 M~~lGID~GsT~tk~av~d-------------------~~~~il~~~~~~~g~~~e~a~~vl~~~~~~a~~~~~------ 55 (276)
T 4ehu_A 1 MYTMGLDIGSTASKGVILK-------------------NGEDIVASETISSGTGTTGPSRVLEKLYGKTGLARE------ 55 (276)
T ss_dssp CEEEEEEECSSCEEEEEEE-------------------TTTEEEEEEEESCCTTSSHHHHHHHHHHHHHCCCGG------
T ss_pred CeEEEEEcCccEEEEEEEE-------------------CCCeEEEEEEecCCCCHHHHHHHHHHHHHHCCCcch------
Confidence 3468999999999999977 33455555544331 12344333222 22211
Q ss_pred CCCCCceEEEEecCCcccchHHHHHHhCCccceehhhhhhhhhHHHHHhhcCCcceEeeCCCeeeeecCCCCCccEEEEe
Q 025826 95 ASASDKTLIKATGGGAYKFADLIKEKLGVVLDKEDEMDCLVTGANFLLKAVHQEAFTYVDGQKEFVQIDQNDLYPYLLVN 174 (247)
Q Consensus 95 ~~~~~~~~i~~TGGga~k~~~~~~~~lg~~~~k~dEm~cli~G~~fLl~~i~~e~f~~~~~~~~~~~~~~~~~~PyLlVN 174 (247)
....+.+||++..- +...+..++|++|...|..++.. ..+ .+++-
T Consensus 56 ----~~~~~a~t~~~~~a--------~~~~~~~Vne~~aha~a~~~~~~----------------------~~~-~vl~l 100 (276)
T 4ehu_A 56 ----DIKKVVVTGYGRMN--------YSDADKQISELSCHARGVNFIIP----------------------ETR-TIIDI 100 (276)
T ss_dssp ----GEEEEEEESTTGGG--------CCSCSEECCHHHHHHHHHHHHST----------------------TCC-EEEEE
T ss_pred ----hccccccCchHHHH--------hhCCCcccchHHHHHHHHHHhCC----------------------CCC-eEEEE
Confidence 13567888887642 33467789999999999887632 123 35566
Q ss_pred cCCceEEEEEeCCCceE--Eeecc-ccCchhHHh-hhhhhcCCCCHHHHHHHHhCCCC
Q 025826 175 IGSGVSMIKVDGDGKFE--RISGT-SVGGGTFWG-LGRLLTNCKSFDELLELSHQGNN 228 (247)
Q Consensus 175 IGSGvSi~kv~~~~~~~--RVgGs-siGGGT~~G-L~~LLtg~~~fdeil~lA~~Gd~ 228 (247)
.|+++.++.+..++.++ +.||+ ..|+|-|.- ++++| + .+|++.-+++++++.
T Consensus 101 gG~~~~~~~~~~~g~~~~~~~~~~~~~g~G~f~d~~a~~l-~-~~~~~~~~~~~~a~~ 156 (276)
T 4ehu_A 101 GGQDAKVLKLDNNGRLLNFLMNDKCAAGTGRFLDVMAKII-E-VDVSELGSISMNSQN 156 (276)
T ss_dssp CSSCEEEEEECTTSCEEEEEEECSCSTTSHHHHHHHHHHH-T-CCGGGHHHHHTTCSS
T ss_pred cCCCceEEEEEecCceEEEEeCCCcCcchhhHHHHHHHHh-c-cChhhhHHHHhcCCC
Confidence 77777777777666665 45655 678887774 44444 4 467788888877654
No 5
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=96.76 E-value=0.12 Score=44.78 Aligned_cols=116 Identities=16% Similarity=0.272 Sum_probs=70.7
Q ss_pred CCeEEEEcCcceeEEEEEeecCCCCCCccCCCCCCCCCCCCeEEEEEeec-cCHHHHHHHHHhhcccccCccccCCCCCC
Q 025826 21 ISHLALDIGGSLIKVVYFLRSNGSGGSVDDSGKKSDPVLEGRLHFAKFET-SKIIDCLEFIRSKNLHLAGFRHHDASASD 99 (247)
Q Consensus 21 ~~~~giDIGGSL~KlvYf~~~~~~~~~~~~~~~~~~~~~~g~l~F~~F~t-~~i~~~i~fi~~~~~~~~~~~~~~~~~~~ 99 (247)
+..+|||||||-+|++-+... +..+...++++ ...+++++.+.+.--. .. ..
T Consensus 4 m~~lgidiggt~i~~~l~d~~------------------g~il~~~~~~~~~~~~~~~~~i~~~i~~-~~--------i~ 56 (292)
T 2gup_A 4 MTIATIDIGGTGIKFASLTPD------------------GKILDKTSISTPENLEDLLAWLDQRLSE-QD--------YS 56 (292)
T ss_dssp CCEEEEEEETTEEEEEEECTT------------------CCEEEEEEECCCSSHHHHHHHHHHHHTT-SC--------CS
T ss_pred cEEEEEEECCCEEEEEEECCC------------------CCEEEEEEEeCCCCHHHHHHHHHHHHHh-CC--------Cc
Confidence 457999999999999986621 12344556666 4667777766553110 00 00
Q ss_pred ceEEEEec------C-----------CcccchHHHHHHhCCccceehhhhhhhhhHHHHHhhcCCcceEeeCCCeeeeec
Q 025826 100 KTLIKATG------G-----------GAYKFADLIKEKLGVVLDKEDEMDCLVTGANFLLKAVHQEAFTYVDGQKEFVQI 162 (247)
Q Consensus 100 ~~~i~~TG------G-----------ga~k~~~~~~~~lg~~~~k~dEm~cli~G~~fLl~~i~~e~f~~~~~~~~~~~~ 162 (247)
..-|.+.| | .-..+.+.| +.+++++.-.+...|...|-.+ . .
T Consensus 57 gigi~~pG~vd~~~g~v~~~~~~~~~~~~~l~~~l-~~~~~pv~v~NDa~aaa~~e~~--~-~----------------- 115 (292)
T 2gup_A 57 GIAMSVPGAVNQETGVIDGFSAVPYIHGFSWYEAL-SSYQLPVHLENDANCVGLSELL--A-H----------------- 115 (292)
T ss_dssp EEEEEESSEECTTTCBEESCCSSGGGSSSBHHHHT-GGGCCCEEEEEHHHHHHHHHHH--H-C-----------------
T ss_pred EEEEEecCcccCCCCEEEecCCCCcccCCCHHHHH-HHcCCCEEEechHHHHHHHHHH--h-c-----------------
Confidence 11122222 0 013455777 8889999999999998877655 1 1
Q ss_pred CCCCCccEEEEecCCceEEEEEeC
Q 025826 163 DQNDLYPYLLVNIGSGVSMIKVDG 186 (247)
Q Consensus 163 ~~~~~~PyLlVNIGSGvSi~kv~~ 186 (247)
....++++|.+|+|+..=.+-+
T Consensus 116 --~~~~~~v~l~~GtGiG~giv~~ 137 (292)
T 2gup_A 116 --PELENAACVVIGTGIGGAMIIN 137 (292)
T ss_dssp --TTCSSEEEEEESSSEEEEEEET
T ss_pred --CCCCeEEEEEECCceEEEEEEC
Confidence 1234589999999987555433
No 6
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=96.51 E-value=0.078 Score=46.99 Aligned_cols=58 Identities=9% Similarity=0.075 Sum_probs=43.4
Q ss_pred cchHHHHHHhC---CccceehhhhhhhhhHHHHHhhcCCcceEeeCCCeeeeecCCCCCccEEEEecCCceEEEEEeCCC
Q 025826 112 KFADLIKEKLG---VVLDKEDEMDCLVTGANFLLKAVHQEAFTYVDGQKEFVQIDQNDLYPYLLVNIGSGVSMIKVDGDG 188 (247)
Q Consensus 112 k~~~~~~~~lg---~~~~k~dEm~cli~G~~fLl~~i~~e~f~~~~~~~~~~~~~~~~~~PyLlVNIGSGvSi~kv~~~~ 188 (247)
.+.+.+++.++ +++.-.+...|...| .+ . .++++|.+|||+--..++.++
T Consensus 89 ~l~~~l~~~~~~~~~pv~v~NDa~aaa~a-~~--~------------------------~~~v~v~~GTGig~~~v~~~G 141 (347)
T 2ch5_A 89 ILIEELRDRFPYLSESYLITTDAAGSIAT-AT--P------------------------DGGVVLISGTGSNCRLINPDG 141 (347)
T ss_dssp HHHHHHHHHCTTSBSCEEEEEHHHHHHHH-HC--S------------------------SCEEEEEESSSEEEEEECTTS
T ss_pred HHHHHHHHhcCCCCceEEEECcHHHHHHh-hC--C------------------------CCcEEEEEcCCceeEEEcCCC
Confidence 55677888886 788889999998877 21 1 126888889999877787667
Q ss_pred ceEEeecc
Q 025826 189 KFERISGT 196 (247)
Q Consensus 189 ~~~RVgGs 196 (247)
..-|.||.
T Consensus 142 ~~c~cG~~ 149 (347)
T 2ch5_A 142 SESGCGGW 149 (347)
T ss_dssp CEEEEECC
T ss_pred CEEecCCc
Confidence 77888864
No 7
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=96.37 E-value=0.18 Score=45.43 Aligned_cols=104 Identities=14% Similarity=0.110 Sum_probs=68.9
Q ss_pred eEEEE-ecCCcc-------cchHHHHHHhCCccceehhhhhhhhhHHHHHhhcCCcceEeeCCCeeeeecCCCCCccEEE
Q 025826 101 TLIKA-TGGGAY-------KFADLIKEKLGVVLDKEDEMDCLVTGANFLLKAVHQEAFTYVDGQKEFVQIDQNDLYPYLL 172 (247)
Q Consensus 101 ~~i~~-TGGga~-------k~~~~~~~~lg~~~~k~dEm~cli~G~~fLl~~i~~e~f~~~~~~~~~~~~~~~~~~PyLl 172 (247)
..|.+ +|=|.+ .+.+-+...++++++.+++++|...+..| .. ..+|.+|
T Consensus 70 d~Ia~~~GPG~~~~lrvg~~~ak~la~~~~~pl~~v~h~~aHa~~a~~-~~----------------------~~~~~~l 126 (330)
T 2ivn_A 70 DVIAFSQGPGLGPALRVVATAARALAVKYRKPIVGVNHCIAHVEITKM-FG----------------------VKDPVGL 126 (330)
T ss_dssp CEEEEEEESSCHHHHHHHHHHHHHHHHHTTCCEEEEEHHHHHHHGGGG-GT----------------------CCSCEEE
T ss_pred cEEEEECCCCchHHHHHHHHHHHHHHHHcCCCEEeeCcHHHHHHHHhh-cC----------------------CCCCeEE
Confidence 34555 455544 45666667788999999999999998766 21 1245677
Q ss_pred EecCCceEEEEEeCCCceEEeeccc-cCchhHHhhhhhhcCCC--CHHHHHHHHhCCCC
Q 025826 173 VNIGSGVSMIKVDGDGKFERISGTS-VGGGTFWGLGRLLTNCK--SFDELLELSHQGNN 228 (247)
Q Consensus 173 VNIGSGvSi~kv~~~~~~~RVgGss-iGGGT~~GL~~LLtg~~--~fdeil~lA~~Gd~ 228 (247)
+-.|-.+.++.++ .++|+.+|+|. .+=|=++--..-+.|.. .--++.+||..|+.
T Consensus 127 ~v~GG~t~~i~~~-~~~~~~lg~t~dds~Gr~fD~vA~~LGl~~~~~~~le~lA~~g~~ 184 (330)
T 2ivn_A 127 YVSGGNTQVLALE-GGRYRVFGETLDIGIGNAIDVFARELGLGFPGGPKVEKLAEKGEK 184 (330)
T ss_dssp EECSSCEEEEEEE-TTEEEEEEEBSSSCHHHHHHHHHHHHTCCSCHHHHHHHHHHTCCS
T ss_pred EEcCCCceEEEEc-CCeEEEEEeecCchhHHHHHHHHHHhCCCCCcHHHHHHHhhcCCC
Confidence 7777688888887 68999999763 22233333333333433 22478888998874
No 8
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=96.34 E-value=0.15 Score=45.33 Aligned_cols=55 Identities=13% Similarity=0.210 Sum_probs=41.1
Q ss_pred cchHHHHHHhCCccceehhhhhhhhhHHHHHhhcCCcceEeeCCCeeeeecCCCCCccEEEEecCCceEEEEEeC
Q 025826 112 KFADLIKEKLGVVLDKEDEMDCLVTGANFLLKAVHQEAFTYVDGQKEFVQIDQNDLYPYLLVNIGSGVSMIKVDG 186 (247)
Q Consensus 112 k~~~~~~~~lg~~~~k~dEm~cli~G~~fLl~~i~~e~f~~~~~~~~~~~~~~~~~~PyLlVNIGSGvSi~kv~~ 186 (247)
.+.+.|++.+++++.-.+...|...|-.++-. . ....++++|.+|||+..=.+-+
T Consensus 87 ~l~~~l~~~~~~pv~v~NDa~aaal~E~~~g~-~-------------------~~~~~~~~l~~GtGiG~gii~~ 141 (321)
T 3vgl_A 87 PLKDKVEQRVGLPVVVENDANAAAWGEYRFGA-G-------------------QGHDDVICITLGTGLGGGIIIG 141 (321)
T ss_dssp CHHHHHHHHHCSCEEEEEHHHHHHHHHHHHST-T-------------------TTCSSEEEEEESSSEEEEEEET
T ss_pred CHHHHHhhhhCCCEEEEehhhhHHHHHHHhCC-C-------------------CCCCCEEEEEeCcceEEEEEEC
Confidence 45688999999999999999999888766521 0 1234589999999987655544
No 9
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=96.27 E-value=0.31 Score=42.01 Aligned_cols=119 Identities=13% Similarity=0.129 Sum_probs=71.9
Q ss_pred CeEEEEcCcceeEEEEEeecCCCCCCccCCCCCCCCCCCCeEEEEEeeccC---HHHHHHHHHhhcccccCccccCCCCC
Q 025826 22 SHLALDIGGSLIKVVYFLRSNGSGGSVDDSGKKSDPVLEGRLHFAKFETSK---IIDCLEFIRSKNLHLAGFRHHDASAS 98 (247)
Q Consensus 22 ~~~giDIGGSL~KlvYf~~~~~~~~~~~~~~~~~~~~~~g~l~F~~F~t~~---i~~~i~fi~~~~~~~~~~~~~~~~~~ 98 (247)
..+|||||||-+|++-+... +-.+...++++.. .+++++.+.+.--.... + .
T Consensus 2 ~~lgidiggt~~~~~l~d~~------------------g~il~~~~~~~~~~~~~~~~~~~i~~~i~~~~~-~------~ 56 (289)
T 2aa4_A 2 TTLAIDIGGTKLAAALIGAD------------------GQIRDRRELPTPASQTPEALRDALSALVSPLQA-H------A 56 (289)
T ss_dssp CEEEEEECSSEEEEEEECTT------------------CCEEEEEEEECCSSCCHHHHHHHHHHHHTTTGG-G------C
T ss_pred eEEEEEeCCCEEEEEEECCC------------------CCEEEEEEecCCCCCCHHHHHHHHHHHHHHHHh-h------C
Confidence 35899999999999987621 1124445666643 56777766553211100 0 0
Q ss_pred CceEEEEecC-----C----c--------ccchHHHHHHhCCccceehhhhhhhhhHHHHHhhcCCcceEeeCCCeeeee
Q 025826 99 DKTLIKATGG-----G----A--------YKFADLIKEKLGVVLDKEDEMDCLVTGANFLLKAVHQEAFTYVDGQKEFVQ 161 (247)
Q Consensus 99 ~~~~i~~TGG-----g----a--------~k~~~~~~~~lg~~~~k~dEm~cli~G~~fLl~~i~~e~f~~~~~~~~~~~ 161 (247)
...-|.+.|= | + ..+.+.|++.+++++.-.+...|...|-.++-.
T Consensus 57 ~~igi~~pG~vd~~~g~v~~~~~~~~w~~~~l~~~l~~~~~~pv~v~NDa~aaa~~e~~~g~------------------ 118 (289)
T 2aa4_A 57 QRVAIASTGIIRDGSLLALNPHNLGGLLHFPLVKTLEQLTNLPTIAINDAQAAAWAEFQALD------------------ 118 (289)
T ss_dssp SEEEEEESSEEETTEEECSSGGGGGGGTTCCHHHHHHHHHCSCEEEEEHHHHHHHHHHHTSC------------------
T ss_pred CEEEEEeccceeCCCCEEEeCCCCCcccCCChHHHHHHHHCCCEEEechHHHHHHHHHHhCC------------------
Confidence 0122333221 0 0 234678888899999999999998877654311
Q ss_pred cCCCCCccEEEEecCCceEEEEEeC
Q 025826 162 IDQNDLYPYLLVNIGSGVSMIKVDG 186 (247)
Q Consensus 162 ~~~~~~~PyLlVNIGSGvSi~kv~~ 186 (247)
.... ++++|.+|+|+..=.+.+
T Consensus 119 --~~~~-~~v~l~~GtGiG~gii~~ 140 (289)
T 2aa4_A 119 --GDIT-DMVFITVSTGVGGGVVSG 140 (289)
T ss_dssp --TTCC-CEEEEEESSSEEEEEEET
T ss_pred --CCCc-eEEEEEeCccEEEEEEEC
Confidence 0223 789999999987655544
No 10
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=95.89 E-value=0.17 Score=44.94 Aligned_cols=118 Identities=14% Similarity=0.178 Sum_probs=73.1
Q ss_pred CCeEEEEcCcceeEEEEEeecCCCCCCccCCCCCCCCCCCCeEEEEEeeccCHHHHHHHHHhhcccccCccccCCCCCCc
Q 025826 21 ISHLALDIGGSLIKVVYFLRSNGSGGSVDDSGKKSDPVLEGRLHFAKFETSKIIDCLEFIRSKNLHLAGFRHHDASASDK 100 (247)
Q Consensus 21 ~~~~giDIGGSL~KlvYf~~~~~~~~~~~~~~~~~~~~~~g~l~F~~F~t~~i~~~i~fi~~~~~~~~~~~~~~~~~~~~ 100 (247)
...+|||||||-+|++-+.. .+..+.-.+++|..-+++++-+.+.-.. ..+ ..
T Consensus 3 ~~~lgiDiGgt~i~~~l~d~------------------~G~il~~~~~~t~~~~~~l~~i~~~~~~-~~i--------~g 55 (302)
T 3epq_A 3 AMLGGIEAGGTXFVCAVGRE------------------DGTIIDRIEFPTXMPDETIEXVIQYFSQ-FSL--------QA 55 (302)
T ss_dssp CCEEEEEECSSEEEEEEECT------------------TSCEEEEEEEECCCHHHHHHHHHHHHTT-SCC--------SE
T ss_pred cEEEEEEECcceeEEEEEEC------------------CCcEEEEEEecCCChHHHHHHHHHHhcc-CCc--------eE
Confidence 35789999999999998762 1223556778887766666554432100 000 01
Q ss_pred eEEEEec-----------C----------CcccchHHHHHHhCCccceehhhhhhhhhHHHHHhhcCCcceEeeCCCeee
Q 025826 101 TLIKATG-----------G----------GAYKFADLIKEKLGVVLDKEDEMDCLVTGANFLLKAVHQEAFTYVDGQKEF 159 (247)
Q Consensus 101 ~~i~~TG-----------G----------ga~k~~~~~~~~lg~~~~k~dEm~cli~G~~fLl~~i~~e~f~~~~~~~~~ 159 (247)
.-|.+.| | .-..+.+.|++.+++++.-.+...|...|=.++-. .
T Consensus 56 igi~~pG~vd~~~~~~~~G~i~~~~~~~w~~~~l~~~l~~~~~~pV~v~NDanaaalaE~~~G~-~-------------- 120 (302)
T 3epq_A 56 IGIGSFGPVDNDXTSQTYGTITATPXAGWRHYPFLQTVXNEMXIPVGFSTDVNAAALGEFLFGE-A-------------- 120 (302)
T ss_dssp EEEEECSSEECCTTSTTTTEECCCSSTTTBTCCHHHHHHHHHCSCEEEEEHHHHHHHHHHHHST-T--------------
T ss_pred EEEEeceeeccccccccccEEecCCCCCccCCChHHHHHHHhCCCEEEechhHHHHHHHHHhCC-C--------------
Confidence 1111111 1 11345688999999999999999999888665521 0
Q ss_pred eecCCCCCccEEEEecCCceEEEEEe
Q 025826 160 VQIDQNDLYPYLLVNIGSGVSMIKVD 185 (247)
Q Consensus 160 ~~~~~~~~~PyLlVNIGSGvSi~kv~ 185 (247)
.....++.|.+|||+--=-+-
T Consensus 121 -----~~~~~~~~l~~GtGiG~gii~ 141 (302)
T 3epq_A 121 -----XGLDSCLYITIGTGIGAGAIV 141 (302)
T ss_dssp -----TTCSCEEEEEESSSEEEEEEE
T ss_pred -----CCCCcEEEEEECCceEEEEEE
Confidence 123458999999988644443
No 11
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=95.65 E-value=0.42 Score=43.83 Aligned_cols=17 Identities=24% Similarity=0.356 Sum_probs=15.8
Q ss_pred eEEEEcCcceeEEEEEe
Q 025826 23 HLALDIGGSLIKVVYFL 39 (247)
Q Consensus 23 ~~giDIGGSL~KlvYf~ 39 (247)
.++||||||-+|++-+.
T Consensus 4 vlgidiGgt~ik~al~d 20 (381)
T 1saz_A 4 ILTINPGSTSTKLSIFE 20 (381)
T ss_dssp EEEEEECSSEEEEEEEE
T ss_pred EEEEECCccceeEEEEe
Confidence 58999999999999987
No 12
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=95.61 E-value=0.42 Score=44.15 Aligned_cols=55 Identities=13% Similarity=0.131 Sum_probs=40.0
Q ss_pred cchHHHHHHhCCccceehhhhhhhhhHHHHHhhcCCcceEeeCCCeeeeecCCCCCccEEEEecCCceEEEEEeC
Q 025826 112 KFADLIKEKLGVVLDKEDEMDCLVTGANFLLKAVHQEAFTYVDGQKEFVQIDQNDLYPYLLVNIGSGVSMIKVDG 186 (247)
Q Consensus 112 k~~~~~~~~lg~~~~k~dEm~cli~G~~fLl~~i~~e~f~~~~~~~~~~~~~~~~~~PyLlVNIGSGvSi~kv~~ 186 (247)
.+.+.|++.+++++.-.+...|...|-.++-. .....++++|.+|+|+..=.+-+
T Consensus 199 ~l~~~L~~~~~~pV~v~NDa~aaalaE~~~g~--------------------~~~~~~~v~l~~GtGiG~giv~~ 253 (429)
T 1z05_A 199 ALGPEIYKATGLPVFVANDTRAWALAEKLFGH--------------------SQDVDNSVLISIHHGLGAGIVLD 253 (429)
T ss_dssp CHHHHHHHHHCSCEEEEEHHHHHHHHHHHHST--------------------TTTCSSEEEEEESSSEEEEEEET
T ss_pred CHHHHHHHHhCCCEEEechhHHHHHHHHHhCC--------------------CCCCCcEEEEEECCcEEEEEEEC
Confidence 45678899999999999999998888665421 01234589999999987554433
No 13
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=95.46 E-value=0.46 Score=42.09 Aligned_cols=56 Identities=13% Similarity=0.394 Sum_probs=41.4
Q ss_pred ccchHHHHHHh-CCccceehhhhhhhhhHHHHHhhcCCcceEeeCCCeeeeecCCCCCccEEEEecCCceEEEEEeC
Q 025826 111 YKFADLIKEKL-GVVLDKEDEMDCLVTGANFLLKAVHQEAFTYVDGQKEFVQIDQNDLYPYLLVNIGSGVSMIKVDG 186 (247)
Q Consensus 111 ~k~~~~~~~~l-g~~~~k~dEm~cli~G~~fLl~~i~~e~f~~~~~~~~~~~~~~~~~~PyLlVNIGSGvSi~kv~~ 186 (247)
..+.+.|++.+ ++++.-.+...|...|-.++-. . ....++++|.+|||+..=.+.+
T Consensus 107 ~~l~~~l~~~~~~~pV~v~NDa~aaalaE~~~g~-~-------------------~~~~~~v~l~~GtGiG~gii~~ 163 (321)
T 3r8e_A 107 VPIVEILRSEFPHIHFKIENDAKCAALGEYYFGE-N-------------------KRMQTFILLALGTGVGSGVMMN 163 (321)
T ss_dssp CCHHHHHHHHCTTSEEEEEEHHHHHHHHHHHHST-T-------------------TTCSSEEEEEESSSEEEEEEET
T ss_pred CCHHHHHHHHcCCCCEEEEchHHHHHHHHHHhCC-C-------------------CCCCcEEEEEECCceEEEEEEC
Confidence 44567889999 9999999999999888766521 0 1234589999999987655544
No 14
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=95.45 E-value=0.26 Score=43.76 Aligned_cols=30 Identities=7% Similarity=0.295 Sum_probs=24.1
Q ss_pred ccEEEEecCCceEEEEEeCCCceEEeeccccC
Q 025826 168 YPYLLVNIGSGVSMIKVDGDGKFERISGTSVG 199 (247)
Q Consensus 168 ~PyLlVNIGSGvSi~kv~~~~~~~RVgGssiG 199 (247)
.|.|+|..||.+.+=.|+.++ +.+||...=
T Consensus 125 ~~~iVVD~GTA~T~d~v~~~g--~~lGG~I~P 154 (266)
T 3djc_A 125 QNIIVIDFGTATTFCAISHKK--AYLGGAILP 154 (266)
T ss_dssp SEEEEEEESSEEEEEEECTTS--EEEEEEEEE
T ss_pred CCEEEEECCCeeEEEEEcCCC--cEEEEEECc
Confidence 589999999999999998865 566776443
No 15
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=95.38 E-value=0.39 Score=41.92 Aligned_cols=55 Identities=15% Similarity=0.257 Sum_probs=39.9
Q ss_pred cchHHHHHHhCCccceehhhhhhhhhHHHHHhhcCCcceEeeCCCeeeeecCCCCCccEEEEecCCceEEEEEeC
Q 025826 112 KFADLIKEKLGVVLDKEDEMDCLVTGANFLLKAVHQEAFTYVDGQKEFVQIDQNDLYPYLLVNIGSGVSMIKVDG 186 (247)
Q Consensus 112 k~~~~~~~~lg~~~~k~dEm~cli~G~~fLl~~i~~e~f~~~~~~~~~~~~~~~~~~PyLlVNIGSGvSi~kv~~ 186 (247)
.+.+.|++.+++++.-.+...|...|-.++-. . ....++++|.+|+|+..-.+.+
T Consensus 99 ~l~~~l~~~~~~pv~v~ND~~aaa~~e~~~g~-~-------------------~~~~~~~~l~~GtGiG~giv~~ 153 (326)
T 2qm1_A 99 PVKEQIESALGIPFALDNDANVAALGERWKGA-G-------------------ENNPDVIFITLGTGVGGGIVAA 153 (326)
T ss_dssp CHHHHHHHHHCSCEEEEEHHHHHHHHHHHHST-T-------------------TTCSCEEEEEESSSEEEEEEET
T ss_pred hHHHHHHHHhCCCEEEecHHHHHHHHHHHhCC-C-------------------CCCCcEEEEEECCceEEEEEEC
Confidence 44778888999999999999998877655421 0 1234689999999988665544
No 16
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=95.27 E-value=0.86 Score=40.09 Aligned_cols=54 Identities=11% Similarity=0.144 Sum_probs=37.1
Q ss_pred chHHHHHHhCCccceehhhhhhhhhHHHHHhhcCCcceEeeCCCeeeeecCCCCCccEEEEecCCceEEEEEeC
Q 025826 113 FADLIKEKLGVVLDKEDEMDCLVTGANFLLKAVHQEAFTYVDGQKEFVQIDQNDLYPYLLVNIGSGVSMIKVDG 186 (247)
Q Consensus 113 ~~~~~~~~lg~~~~k~dEm~cli~G~~fLl~~i~~e~f~~~~~~~~~~~~~~~~~~PyLlVNIGSGvSi~kv~~ 186 (247)
+.+.|++.+++++.-.+...|...|-.++-. . ....++++|.+|||+..=.+-+
T Consensus 112 l~~~l~~~~~~pv~v~NDa~aaalgE~~~g~-~-------------------~~~~~~v~l~~GtGiG~giv~~ 165 (327)
T 2ap1_A 112 LRADLSARLDRDVRLDNDANCFALSEAWDDE-F-------------------TQYPLVMGLILGTGVGGGLVLN 165 (327)
T ss_dssp HHHHHHHHHTSCEEEEEHHHHHHHHHHTSTT-G-------------------GGCSEEEEEEESSSEEEEEEET
T ss_pred hHHHHHHHHCCCEEEecHHHHHHHHHHHhCc-C-------------------CCCCcEEEEEECCcEEEEEEEC
Confidence 3577888899999999999998777543311 0 1123578899999986544433
No 17
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=95.24 E-value=0.63 Score=40.93 Aligned_cols=54 Identities=13% Similarity=0.126 Sum_probs=39.0
Q ss_pred cchHHHHHHhCCccceehhhhhhhhhHHHHHhhcCCcceEeeCCCeeeeecCCCCCccEEEEecCCceEEEEEe
Q 025826 112 KFADLIKEKLGVVLDKEDEMDCLVTGANFLLKAVHQEAFTYVDGQKEFVQIDQNDLYPYLLVNIGSGVSMIKVD 185 (247)
Q Consensus 112 k~~~~~~~~lg~~~~k~dEm~cli~G~~fLl~~i~~e~f~~~~~~~~~~~~~~~~~~PyLlVNIGSGvSi~kv~ 185 (247)
.+.+.|++.+++++.-.+...|...|-.++-. . .....+++|.+|||+-.=-+-
T Consensus 89 ~l~~~l~~~~~~pv~v~NDa~aaal~E~~~g~-~-------------------~~~~~~~~l~~GtGiG~gii~ 142 (302)
T 3vov_A 89 PIRRILEEATGRPVFLENDANAAALAEHHLGA-A-------------------QGEESSLYLTVSTGIGGGVVL 142 (302)
T ss_dssp CHHHHHHHHHSSCEEEEEHHHHHHHHHHHHST-T-------------------TTCSCEEEEEESSSEEEEEEE
T ss_pred ChHHHHHHhhCCCEEEEechHHHHHHHHHhCC-C-------------------CCCCCEEEEEECCceeEEEEE
Confidence 45678899999999999999999888765521 0 123457889999987644443
No 18
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=95.03 E-value=0.38 Score=43.88 Aligned_cols=56 Identities=9% Similarity=0.128 Sum_probs=40.1
Q ss_pred ccchHHHHHHhCCccceehhhhhhhhhHHHHHhhcCCcceEeeCCCeeeeecCCCCCccEEEEecCCceEEEEEeC
Q 025826 111 YKFADLIKEKLGVVLDKEDEMDCLVTGANFLLKAVHQEAFTYVDGQKEFVQIDQNDLYPYLLVNIGSGVSMIKVDG 186 (247)
Q Consensus 111 ~k~~~~~~~~lg~~~~k~dEm~cli~G~~fLl~~i~~e~f~~~~~~~~~~~~~~~~~~PyLlVNIGSGvSi~kv~~ 186 (247)
..+.+.|++.+++++.-.+...|...|-.++-. . ....++++|.+|+|+..=.+.+
T Consensus 176 ~~l~~~l~~~~~~pv~v~NDa~aaalaE~~~g~-~-------------------~~~~~~v~l~~GtGiG~giv~~ 231 (406)
T 1z6r_A 176 MPLGEALEQHTGVPVYIQHDISAWTMAEALFGA-S-------------------RGARDVIQVVIDHNVGAGVITD 231 (406)
T ss_dssp BCHHHHHHHHHSSCEEEEEHHHHHHHHHHHHST-T-------------------TTCSSEEEEEESSSEEEEEEET
T ss_pred CCHHHHHHHHHCCCEEEechhHHHHHHHHHhcC-C-------------------CCCCcEEEEEECCcEEEEEEEC
Confidence 345678889999999999999998888665421 0 1234589999999987655533
No 19
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=95.01 E-value=0.18 Score=44.09 Aligned_cols=28 Identities=14% Similarity=0.292 Sum_probs=22.4
Q ss_pred ccEEEEecCCceEEEEEeCCCceEEeecccc
Q 025826 168 YPYLLVNIGSGVSMIKVDGDGKFERISGTSV 198 (247)
Q Consensus 168 ~PyLlVNIGSGvSi~kv~~~~~~~RVgGssi 198 (247)
.|.|+|..||.|.+=.| .++ +++||.-+
T Consensus 122 ~~~iVvD~GTA~T~d~v-~~g--~~lGG~I~ 149 (249)
T 3bex_A 122 KNGIIIDMGTATTVDLV-VNG--SYEGGAIL 149 (249)
T ss_dssp SCEEEEEESSEEEEEEE-ETT--EEEEEEEE
T ss_pred CCEEEEEcCCceEEEEE-eCC--eEeeEEEC
Confidence 58999999999999999 645 56677544
No 20
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=94.71 E-value=0.15 Score=45.40 Aligned_cols=138 Identities=12% Similarity=0.168 Sum_probs=67.8
Q ss_pred CCCCCCCeEEEEcCcceeEEEEEeecCCCCCCccCCCCCCCCCCCCeEEEEEeeccC---HHHHH-HHHHhhcccccCcc
Q 025826 16 ESESQISHLALDIGGSLIKVVYFLRSNGSGGSVDDSGKKSDPVLEGRLHFAKFETSK---IIDCL-EFIRSKNLHLAGFR 91 (247)
Q Consensus 16 ~~~~~~~~~giDIGGSL~KlvYf~~~~~~~~~~~~~~~~~~~~~~g~l~F~~F~t~~---i~~~i-~fi~~~~~~~~~~~ 91 (247)
++-+....+|||||||-+|++-+...+ +.-+...+++|.. +.+.+ +++++......++.
T Consensus 9 ~~~~~~~~lgiDiGGT~i~~~l~dl~~-----------------g~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~gig 71 (332)
T 1sz2_A 9 HHGSTKYALVGDVGGTNARLALCDIAS-----------------GEISQAKTYSGLDYPSLEAVIRVYLEEHKVEVKDGC 71 (332)
T ss_dssp -----CEEEEEEEETTEEEEEEEETTT-----------------CCEEEEEEEEGGGCSCHHHHHHHHHHHSCCCCCEEE
T ss_pred ccCCCCEEEEEEechhheEEEEEECCC-----------------CcEEEEEEecCCCcCCHHHHHHHHHHhcCCCccEEE
Confidence 335566779999999999999976211 1123445677753 43433 34433211000000
Q ss_pred ccCCCCCCceEEEEec-CCcccchHHHHHHhCCc-cceehhhhhhhhhHHHHHhhcCCcceEeeCCCeeeeecCCCCCcc
Q 025826 92 HHDASASDKTLIKATG-GGAYKFADLIKEKLGVV-LDKEDEMDCLVTGANFLLKAVHQEAFTYVDGQKEFVQIDQNDLYP 169 (247)
Q Consensus 92 ~~~~~~~~~~~i~~TG-Gga~k~~~~~~~~lg~~-~~k~dEm~cli~G~~fLl~~i~~e~f~~~~~~~~~~~~~~~~~~P 169 (247)
-..-...+...+..+- +-... .+.+++.++++ +.-.+...|...|-.++-. +...+|-... .....+
T Consensus 72 i~~pG~vd~~~~~~~nl~w~~~-~~~l~~~~~~p~V~v~NDanaaalgE~~~~~---~~~~~~g~g~-------~~~~~~ 140 (332)
T 1sz2_A 72 IAIACPITGDWVAMTNHTWAFS-IAEMKKNLGFSHLEIINDFTAVSMAIPMLKK---EHLIQFGGAE-------PVEGKP 140 (332)
T ss_dssp EEESSCCCSSEECCSSSCCCEE-HHHHHHHHTCSEEEEEEHHHHHHHHGGGCCG---GGEEECSSCC-------CCTTCC
T ss_pred EEEeCceeCCEEeeeCCCCcCC-HHHHHHHhCCCcEEEEeCHhHHhccccccCh---hhheecCCCC-------CCCCCc
Confidence 0000000111111110 00122 46788889997 9999999998877654311 1111111110 023356
Q ss_pred EEEEecCCceEE
Q 025826 170 YLLVNIGSGVSM 181 (247)
Q Consensus 170 yLlVNIGSGvSi 181 (247)
+++|.+|||+--
T Consensus 141 ~~~v~~GTGiG~ 152 (332)
T 1sz2_A 141 IAVYGAGTGLGV 152 (332)
T ss_dssp EEEEEESSSEEE
T ss_pred EEEEEcCccceE
Confidence 899999998875
No 21
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=94.52 E-value=0.27 Score=42.73 Aligned_cols=105 Identities=17% Similarity=0.150 Sum_probs=62.4
Q ss_pred eEEEEcCcceeEEEEEeecCCCCCCccCCCCCCCCCCCCe-EEEEEeeccC-----HHHHHHHHHhhcccccCccccCCC
Q 025826 23 HLALDIGGSLIKVVYFLRSNGSGGSVDDSGKKSDPVLEGR-LHFAKFETSK-----IIDCLEFIRSKNLHLAGFRHHDAS 96 (247)
Q Consensus 23 ~~giDIGGSL~KlvYf~~~~~~~~~~~~~~~~~~~~~~g~-l~F~~F~t~~-----i~~~i~fi~~~~~~~~~~~~~~~~ 96 (247)
.+|||||||-+|++.+.. .|+ +.-.++++.. .+++++.+.+.--.... . .
T Consensus 4 ~lgiDiGgt~~~~~l~d~-------------------~g~i~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~-~----~ 59 (299)
T 2e2o_A 4 IVGVDAGGTKTKAVAYDC-------------------EGNFIGEGSSGPGNYHNVGLTRAIENIKEAVKIAAK-G----E 59 (299)
T ss_dssp EEEEEECSSCEEEEEECT-------------------TSCEEEEEEESCCCHHHHCHHHHHHHHHHHHHHHHT-S----C
T ss_pred EEEEEeCCCcEEEEEEcC-------------------CCCEEEEEeCCCCCcccCCHHHHHHHHHHHHHHHHh-c----C
Confidence 689999999999999762 233 4445676653 35555544432111000 0 0
Q ss_pred CCCceEEEEecCC----cccchHHHHHHhCCccceehhhhhhhhhHHHHHhhcCCcceEeeCCCeeeeecCCCCCccEEE
Q 025826 97 ASDKTLIKATGGG----AYKFADLIKEKLGVVLDKEDEMDCLVTGANFLLKAVHQEAFTYVDGQKEFVQIDQNDLYPYLL 172 (247)
Q Consensus 97 ~~~~~~i~~TGGg----a~k~~~~~~~~lg~~~~k~dEm~cli~G~~fLl~~i~~e~f~~~~~~~~~~~~~~~~~~PyLl 172 (247)
....-|.+.|=. ...+.+.+++ +++++.-.+...|...|-.. ..++++
T Consensus 60 -~~~igi~~~G~~~~~~~~~l~~~l~~-~~~pv~v~ND~~aaa~~e~~--------------------------~~~~v~ 111 (299)
T 2e2o_A 60 -ADVVGMGVAGLDSKFDWENFTPLASL-IAPKVIIQHDGVIALFAETL--------------------------GEPGVV 111 (299)
T ss_dssp -CSEEEEEETTCCSHHHHHHHHHHHTT-SSSEEEEEEHHHHHHHHHHT--------------------------TSCEEE
T ss_pred -CCEEEEEcCCCCchhHHHHHHHHHHh-CCCCEEEeCcHHHHHhhccC--------------------------CCCeEE
Confidence 112345566541 1345566666 77888888888887665321 134899
Q ss_pred EecCCce
Q 025826 173 VNIGSGV 179 (247)
Q Consensus 173 VNIGSGv 179 (247)
+.+|||+
T Consensus 112 l~~GTG~ 118 (299)
T 2e2o_A 112 VIAGTGS 118 (299)
T ss_dssp EEESSSE
T ss_pred EEecCCE
Confidence 9999994
No 22
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=94.35 E-value=1 Score=39.38 Aligned_cols=56 Identities=20% Similarity=0.439 Sum_probs=40.3
Q ss_pred ccchHHHHHHhCCccceehhhhhhhhhHHHHHhhcCCcceEeeCCCeeeeecCCCCCccEEEEecCCceEEEEEeC
Q 025826 111 YKFADLIKEKLGVVLDKEDEMDCLVTGANFLLKAVHQEAFTYVDGQKEFVQIDQNDLYPYLLVNIGSGVSMIKVDG 186 (247)
Q Consensus 111 ~k~~~~~~~~lg~~~~k~dEm~cli~G~~fLl~~i~~e~f~~~~~~~~~~~~~~~~~~PyLlVNIGSGvSi~kv~~ 186 (247)
..+.+.|++.+++++.-.+...|...|-.++-. . .....+++|.+|||+-.=.+-+
T Consensus 87 ~~l~~~l~~~~~~pV~v~NDa~aaal~E~~~g~-~-------------------~~~~~~~~l~~GtGiG~giv~~ 142 (297)
T 4htl_A 87 FNLKEWLEAETGLPVAIENDANCALLAEKWLGK-G-------------------QDLDDFLCLTIGTGIGGGIFSN 142 (297)
T ss_dssp EEHHHHHHHHHCSCEEEEEHHHHHHHHHHHHST-T-------------------TTCSSEEEEEESSSEEEEEEET
T ss_pred CCHHHHHHHHHCcCEEEecHHHHHHHHHHHhCC-C-------------------CCCCcEEEEEECcceEEEEEEC
Confidence 345678899999999999999999888765521 0 1234588999999886544433
No 23
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=94.07 E-value=1.1 Score=38.93 Aligned_cols=124 Identities=15% Similarity=0.034 Sum_probs=69.9
Q ss_pred eEEEEcCcceeEEEEEeecCCCCCCccCCCCCCCCCCCCeEEEEEeecc-----CHHHHHHHHHhhcccccCccccCCCC
Q 025826 23 HLALDIGGSLIKVVYFLRSNGSGGSVDDSGKKSDPVLEGRLHFAKFETS-----KIIDCLEFIRSKNLHLAGFRHHDASA 97 (247)
Q Consensus 23 ~~giDIGGSL~KlvYf~~~~~~~~~~~~~~~~~~~~~~g~l~F~~F~t~-----~i~~~i~fi~~~~~~~~~~~~~~~~~ 97 (247)
.+|||||||-+|.+-+. .. ..+.-.+.++. ..+++++-+.+.-....+.. ...
T Consensus 2 ~lgiDiGGT~~~~~l~d-~g------------------~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~---~~~ 59 (291)
T 1zbs_A 2 ILIGDSGSTKTDWCIAK-EG------------------KSLGRFQTSGINPFQQDRNEIDTALRSEVLPAIGQK---ASS 59 (291)
T ss_dssp EEEEEECSSEEEEEEEE-TT------------------EEEEEEEEECCCTTTSCHHHHHHHHTTTTHHHHTTS---TTT
T ss_pred EEEEEeCccceEEEEEe-CC------------------eEEEEEECCCCCcccCCHHHHHHHHHHHHHHHhCCC---ccc
Confidence 58999999999999866 31 12333445442 34566665544211101000 001
Q ss_pred CCceEEEEecCCcc---cchHHHHHHhCC--ccceehhhhhhhhhHHHHHhhcCCcceEeeCCCeeeeecCCCCCccEEE
Q 025826 98 SDKTLIKATGGGAY---KFADLIKEKLGV--VLDKEDEMDCLVTGANFLLKAVHQEAFTYVDGQKEFVQIDQNDLYPYLL 172 (247)
Q Consensus 98 ~~~~~i~~TGGga~---k~~~~~~~~lg~--~~~k~dEm~cli~G~~fLl~~i~~e~f~~~~~~~~~~~~~~~~~~PyLl 172 (247)
....-|.++|=... .+.+.+++.++. ++.-.+...|...|-. . ..+.++
T Consensus 60 i~~igig~pG~~~~~~~~l~~~l~~~~~~~~pv~v~NDa~~aa~ge~------g--------------------~~~~v~ 113 (291)
T 1zbs_A 60 IRAVYFYGAGCTPAKAPMLNEALDSMLPHCDRIEVAGDMLGAARALC------G--------------------DSEGIA 113 (291)
T ss_dssp CCEEEEEETTCCTTTHHHHHHHHHHHSTTCSEEEEECHHHHHHHHHT------T--------------------TSCEEE
T ss_pred ccEEEEECCCCChHHHHHHHHHHHHhcCCCCcEEEeCcHHHHHHhhc------C--------------------CCCcEE
Confidence 11234566664311 256677778884 7777777777555520 1 124788
Q ss_pred EecCCce-EEEEEeCCCceEEeec
Q 025826 173 VNIGSGV-SMIKVDGDGKFERISG 195 (247)
Q Consensus 173 VNIGSGv-Si~kv~~~~~~~RVgG 195 (247)
+.+|||+ ....+ .+++..|.||
T Consensus 114 v~~GTGigg~~i~-~~G~~~~aGe 136 (291)
T 1zbs_A 114 CILGTGSNSCLFD-GREIKANVSP 136 (291)
T ss_dssp EEESSSEEEEEEC-SSSEEEECCC
T ss_pred EEecCChheEEEC-CCCcEEEeCC
Confidence 9999999 44443 3367777664
No 24
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=93.75 E-value=1.2 Score=39.49 Aligned_cols=127 Identities=14% Similarity=0.152 Sum_probs=69.9
Q ss_pred CeEEEEcCcceeEEEEEeecCCCCCCccCCCCCCCCCCCCeEEEEEeecc--CHHHHHHHHHhh----cccc---cCccc
Q 025826 22 SHLALDIGGSLIKVVYFLRSNGSGGSVDDSGKKSDPVLEGRLHFAKFETS--KIIDCLEFIRSK----NLHL---AGFRH 92 (247)
Q Consensus 22 ~~~giDIGGSL~KlvYf~~~~~~~~~~~~~~~~~~~~~~g~l~F~~F~t~--~i~~~i~fi~~~----~~~~---~~~~~ 92 (247)
..+|||||||-+|++-+... +..+.-.++++. ..+++++.+.+. .... .++.-
T Consensus 25 ~~lgiDiGgt~i~~~l~d~~------------------G~il~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~gigi 86 (327)
T 4db3_A 25 MYYGFDVGGTKIEFGAFNEK------------------LERVATERVPTPTDDYPLLLETIAGLVAKYDQEFACEGKIGL 86 (327)
T ss_dssp CEEEEEECSSEEEEEEECTT------------------CCEEEEEEEECCTTCHHHHHHHHHHHHHHHHHHHTSCCEEEE
T ss_pred EEEEEEECCCEEEEEEEeCC------------------CcEEEEEEecCCCCCHHHHHHHHHHHHHHHHHhcCCccEEEE
Confidence 68999999999999987621 122444556664 345555444331 1000 00000
Q ss_pred cC-CC-CCCceEEEEecC---CcccchHHHHHHhCCccceehhhhhhhhhHHHHHhhcCCcceEeeCCCeeeeecCCCCC
Q 025826 93 HD-AS-ASDKTLIKATGG---GAYKFADLIKEKLGVVLDKEDEMDCLVTGANFLLKAVHQEAFTYVDGQKEFVQIDQNDL 167 (247)
Q Consensus 93 ~~-~~-~~~~~~i~~TGG---ga~k~~~~~~~~lg~~~~k~dEm~cli~G~~fLl~~i~~e~f~~~~~~~~~~~~~~~~~ 167 (247)
.. .. ......+..+-= ....+.+.|++.+++++.-.+...|...|-.++-. ....
T Consensus 87 ~~pG~vd~~~g~v~~~~~~~~~~~~l~~~l~~~~~~pV~v~NDa~aaalgE~~~g~--------------------~~~~ 146 (327)
T 4db3_A 87 GLPGMEDADDATVLTVNVPAAKGKPLRADLEAKIGRSVKIENDANCFALSEAWDEE--------------------LQDA 146 (327)
T ss_dssp EESEEECTTTCCEEESSSGGGTTSCHHHHHHHHHSSCCEEEEHHHHHHHHHHTSTT--------------------TTTC
T ss_pred EeeccEeCCCCEEEcCCCccccCCCHHHHHHHHHCCCEEEecchhHHHHHHHHhCC--------------------CCCC
Confidence 00 00 000112222210 11344678899999999999999998887654321 0123
Q ss_pred ccEEEEecCCceEEEEEeC
Q 025826 168 YPYLLVNIGSGVSMIKVDG 186 (247)
Q Consensus 168 ~PyLlVNIGSGvSi~kv~~ 186 (247)
..+++|.+|||+..=.+-+
T Consensus 147 ~~~~~l~~GtGiG~gii~~ 165 (327)
T 4db3_A 147 PSVMGLILGTGFGGGLIYE 165 (327)
T ss_dssp SEEEEEEESSSEEEEEEET
T ss_pred CcEEEEEeCccceEEEEEC
Confidence 4578899999886544443
No 25
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=93.44 E-value=1.5 Score=40.40 Aligned_cols=65 Identities=11% Similarity=0.186 Sum_probs=38.9
Q ss_pred cchHHHHHHhCCccceehhhhhhhhhHHHHHhhcCCcceEeeCCCeeeeec-CCCCCccEEEEecCCceEEEEE
Q 025826 112 KFADLIKEKLGVVLDKEDEMDCLVTGANFLLKAVHQEAFTYVDGQKEFVQI-DQNDLYPYLLVNIGSGVSMIKV 184 (247)
Q Consensus 112 k~~~~~~~~lg~~~~k~dEm~cli~G~~fLl~~i~~e~f~~~~~~~~~~~~-~~~~~~PyLlVNIGSGvSi~kv 184 (247)
.+.+.|++.+++++.-.+...|..-|-.++-. .|.. ++..... ......+++.|.+|+|+--=-|
T Consensus 99 ~l~~~L~~~~g~PV~veNDanaaAlgE~~~G~-~p~~-------~~~l~~~g~~~~~~~~v~l~lGtGIG~giv 164 (366)
T 3mcp_A 99 ALGPFLEDIFGIPVFINNDGSLFAYGEALTGV-LPEI-------NRRLREAGSTKRYKNLLGVTLGTGFGAGVV 164 (366)
T ss_dssp CHHHHHHHHHCSCEEEECHHHHHHHHHHHTSH-HHHH-------HHHHHHTTCCCCCCEEEEEEESSSEEEEEE
T ss_pred CHHHHHHHHHCCCEEEechhhHHHHHHHHhCC-Cccc-------ccccccccccCCCCcEEEEEECCcceEEEE
Confidence 34577899999999999999998888665420 0000 0000000 0123456899999998854444
No 26
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=93.34 E-value=1.2 Score=40.47 Aligned_cols=53 Identities=25% Similarity=0.378 Sum_probs=38.6
Q ss_pred cchHHHHHHhCCccceehhhhhhhhhHHHHHhhcCCcceEeeCCCeeeeecCCCCCccEEEEecCCceEEEEEeC
Q 025826 112 KFADLIKEKLGVVLDKEDEMDCLVTGANFLLKAVHQEAFTYVDGQKEFVQIDQNDLYPYLLVNIGSGVSMIKVDG 186 (247)
Q Consensus 112 k~~~~~~~~lg~~~~k~dEm~cli~G~~fLl~~i~~e~f~~~~~~~~~~~~~~~~~~PyLlVNIGSGvSi~kv~~ 186 (247)
.+.+.|++.+++++.-.+...|...|-.++-. .. .++++|.+|+|+..=.+-+
T Consensus 179 ~l~~~l~~~~~~pV~v~NDanaaalaE~~~g~---------------------~~-~~~v~l~~GtGiG~giv~~ 231 (380)
T 2hoe_A 179 PLANLLKEKYGIEVWVENDADMGAVGEKWYTK---------------------RD-DSFAWILTGKGIGAGIIID 231 (380)
T ss_dssp CHHHHHHHHHCSEEEEEEHHHHHHHHHHHHTT---------------------CC-SCEEEEEESSSCEEEEEET
T ss_pred ChHHHHHHHhCCCEEEechHHHHHHHHHHhCC---------------------CC-CcEEEEEeCCceEEEEEEC
Confidence 44578889999999999999998887655421 11 4578899999877544433
No 27
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=92.53 E-value=4.5 Score=34.51 Aligned_cols=60 Identities=15% Similarity=0.230 Sum_probs=41.1
Q ss_pred cchHHHHHHhCCccceehhhhhhhhhHHHHHhhcCCcceEeeCCCeeeeecCCCCCc-cEEEEecCCceEEEEEeCCCce
Q 025826 112 KFADLIKEKLGVVLDKEDEMDCLVTGANFLLKAVHQEAFTYVDGQKEFVQIDQNDLY-PYLLVNIGSGVSMIKVDGDGKF 190 (247)
Q Consensus 112 k~~~~~~~~lg~~~~k~dEm~cli~G~~fLl~~i~~e~f~~~~~~~~~~~~~~~~~~-PyLlVNIGSGvSi~kv~~~~~~ 190 (247)
.+.+.|++.+++++.-.+...|...|-.++-. . .... .+++|.+|+|+-.=-+-+ ++.
T Consensus 105 ~l~~~l~~~~~~pV~v~NDanaaalaE~~~g~-~-------------------~~~~~~~~~l~~GtGIG~giv~~-G~l 163 (267)
T 1woq_A 105 DIDALLTARLGRPVEVINDADAAGLAEARYGA-G-------------------AGVKGTVLVITLGTGIGSAFIFD-GKL 163 (267)
T ss_dssp BHHHHHHHHHTSCEEEEEHHHHHHHHHHHHST-T-------------------TTCCSEEEEEEESSSEEEEEEET-TEE
T ss_pred CHHHHHHHHHCCCEEEeehhHHHHHHHHHhCC-C-------------------CCCCCcEEEEEECcceEEEEEEC-CEE
Confidence 34578888999999999999998888655421 0 1112 367889999988666654 444
Q ss_pred EE
Q 025826 191 ER 192 (247)
Q Consensus 191 ~R 192 (247)
.|
T Consensus 164 ~~ 165 (267)
T 1woq_A 164 VP 165 (267)
T ss_dssp ET
T ss_pred cc
Confidence 33
No 28
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=92.33 E-value=2.3 Score=37.58 Aligned_cols=29 Identities=14% Similarity=0.426 Sum_probs=24.0
Q ss_pred ccEEEEecCCceEEEEEeCCCceEEeecccc
Q 025826 168 YPYLLVNIGSGVSMIKVDGDGKFERISGTSV 198 (247)
Q Consensus 168 ~PyLlVNIGSGvSi~kv~~~~~~~RVgGssi 198 (247)
.|.|+|..||.+.+=.|+.++ +.+||..+
T Consensus 123 ~~~iVVD~GTAtT~d~v~~~g--~~lGG~I~ 151 (268)
T 2h3g_X 123 SPLIIVDFGTATTYCYINEEK--HYMGGVIT 151 (268)
T ss_dssp SSEEEEEESSEEEEEEECTTS--EEEEEEEE
T ss_pred CCEEEEECCCceEEEEECCCC--cEEEEEEC
Confidence 589999999999999998865 56677644
No 29
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=91.97 E-value=1.2 Score=39.42 Aligned_cols=56 Identities=9% Similarity=0.159 Sum_probs=39.9
Q ss_pred ccchHHHHHHhCCccceehhhhhhhhhHHHHHhhcCCcceEeeCCCeeeeecCCCCCccEEEEecCCceEEEEEeC
Q 025826 111 YKFADLIKEKLGVVLDKEDEMDCLVTGANFLLKAVHQEAFTYVDGQKEFVQIDQNDLYPYLLVNIGSGVSMIKVDG 186 (247)
Q Consensus 111 ~k~~~~~~~~lg~~~~k~dEm~cli~G~~fLl~~i~~e~f~~~~~~~~~~~~~~~~~~PyLlVNIGSGvSi~kv~~ 186 (247)
..+.+.|++.+++++.-.+...|...|-.++-. . ....++++|.+|||+..=.+-+
T Consensus 121 ~~l~~~l~~~~~~pv~v~NDa~aaal~E~~~g~-~-------------------~~~~~~v~i~~GtGiG~gii~~ 176 (343)
T 2yhw_A 121 VDLRTPLSDTLHLPVWVDNDGNCAALAERKFGQ-G-------------------KGLENFVTLITGTGIGGGIIHQ 176 (343)
T ss_dssp EECHHHHHHHHCSCEEEEEHHHHHHHHHHHTST-T-------------------TTCSCEEEEEESSSEEEEEEET
T ss_pred CCHHHHHHHHHCCCEEEechhHHHHHHHHHhCC-C-------------------CCCCcEEEEEECCCEEEEEEEC
Confidence 356788999999999999999998877654311 0 1234589999999987554433
No 30
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=89.99 E-value=6 Score=34.33 Aligned_cols=18 Identities=17% Similarity=0.255 Sum_probs=16.2
Q ss_pred CeEEEEcCcceeEEEEEe
Q 025826 22 SHLALDIGGSLIKVVYFL 39 (247)
Q Consensus 22 ~~~giDIGGSL~KlvYf~ 39 (247)
..+|||||||-+|++-+.
T Consensus 12 ~~lGiDiGgT~i~~~l~d 29 (305)
T 1zc6_A 12 YLIGVDGGGTGTRIRLHA 29 (305)
T ss_dssp EEEEEEECSSCEEEEEEE
T ss_pred EEEEEEcCccceEEEEEc
Confidence 369999999999999977
No 31
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=88.26 E-value=1.1 Score=39.00 Aligned_cols=57 Identities=18% Similarity=0.159 Sum_probs=35.8
Q ss_pred cchHHHHHHhC--CccceehhhhhhhhhHHHHHhhcCCcceEeeCCCeeeeecCCCCCccEEEEecCCce-EEEEEeCCC
Q 025826 112 KFADLIKEKLG--VVLDKEDEMDCLVTGANFLLKAVHQEAFTYVDGQKEFVQIDQNDLYPYLLVNIGSGV-SMIKVDGDG 188 (247)
Q Consensus 112 k~~~~~~~~lg--~~~~k~dEm~cli~G~~fLl~~i~~e~f~~~~~~~~~~~~~~~~~~PyLlVNIGSGv-Si~kv~~~~ 188 (247)
.+.+.+++.++ +++.-.+...|...|-. ...+.++|.+|||+ ..-.+ .++
T Consensus 75 ~l~~~l~~~~~~~~pv~v~NDa~~aalge~--------------------------g~~~~v~v~~GTGi~g~gi~-~~G 127 (291)
T 1zxo_A 75 VLRRAIADSLPVIGNIKANSDMLAAAHGLC--------------------------GQKAGIACILGTGSNSCFYN-GKE 127 (291)
T ss_dssp HHHHHHHHHSCCCSCCEEECSHHHHHHHTT--------------------------TTSCBEEEEESSSEEEEEEC-SSS
T ss_pred HHHHHHHHhcCCCceEEEECcHHHHHHhhc--------------------------CCCCcEEEEeCCChheEEEC-CCC
Confidence 35667777777 37777777776544321 11346888999999 44444 336
Q ss_pred ceEEeec
Q 025826 189 KFERISG 195 (247)
Q Consensus 189 ~~~RVgG 195 (247)
+..|.||
T Consensus 128 ~~~~aGe 134 (291)
T 1zxo_A 128 IVSNISP 134 (291)
T ss_dssp EEEECCC
T ss_pred cEEEeCC
Confidence 7777664
No 32
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=88.04 E-value=2.8 Score=37.00 Aligned_cols=52 Identities=12% Similarity=0.149 Sum_probs=34.6
Q ss_pred cchHHHHHHhCCccceehhhhhhhhhHHHHHhhcCCcceEeeCCCeeeeecCCCCCccEEEEecCCceEEEEE
Q 025826 112 KFADLIKEKLGVVLDKEDEMDCLVTGANFLLKAVHQEAFTYVDGQKEFVQIDQNDLYPYLLVNIGSGVSMIKV 184 (247)
Q Consensus 112 k~~~~~~~~lg~~~~k~dEm~cli~G~~fLl~~i~~e~f~~~~~~~~~~~~~~~~~~PyLlVNIGSGvSi~kv 184 (247)
.+.+.|++.+++++.-.+...|...+-.+. . . .....++.|.+|||+--=-|
T Consensus 98 ~l~~~l~~~~~~pv~v~NDanaaa~~e~~~-~--~------------------~~~~~~~~v~~GtGiG~gii 149 (310)
T 3htv_A 98 DLADKLENTLNCPVEFSRDVNLQLSWDVVE-N--R------------------LTQQLVLAAYLGTGMGFAVW 149 (310)
T ss_dssp THHHHHHHHHTSCEEEEEHHHHHHHHHHHH-T--T------------------CTTSCEEEEEESSSEEEEEE
T ss_pred cHHHHHHHHhCCCEEEeeHHHHHHHHHHhh-c--c------------------cCCceEEEEEeceeEEEEEE
Confidence 356788899999999999999865432211 0 0 11234788999998864333
No 33
>2f9w_A Pantothenate kinase; COAA, transferase; HET: PAU; 1.90A {Pseudomonas aeruginosa} SCOP: c.55.1.13 c.55.1.13 PDB: 2f9t_A*
Probab=77.63 E-value=28 Score=30.70 Aligned_cols=29 Identities=24% Similarity=0.432 Sum_probs=23.6
Q ss_pred ccEEEEecCCceEEEEEeCCCceEEeecccc
Q 025826 168 YPYLLVNIGSGVSMIKVDGDGKFERISGTSV 198 (247)
Q Consensus 168 ~PyLlVNIGSGvSi~kv~~~~~~~RVgGssi 198 (247)
.|.|+|..||.|.+=.|+.++ +++||..+
T Consensus 138 ~~~iVVD~GTAtT~D~V~~~G--~~lGG~I~ 166 (271)
T 2f9w_A 138 KACLVIDLGTAVTSDLVAADG--VHLGGYIC 166 (271)
T ss_dssp SCEEEEEESSEEEEEEECTTS--BEEEEEEE
T ss_pred CCEEEEEcCCceEEEEECCCC--eEEEEEEC
Confidence 489999999999999998865 45666544
No 34
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=76.34 E-value=33 Score=28.65 Aligned_cols=41 Identities=27% Similarity=0.321 Sum_probs=28.3
Q ss_pred EEEEecCCceEEEEEeCCCceEEeeccccCchhHHh-hhhhh
Q 025826 170 YLLVNIGSGVSMIKVDGDGKFERISGTSVGGGTFWG-LGRLL 210 (247)
Q Consensus 170 yLlVNIGSGvSi~kv~~~~~~~RVgGssiGGGT~~G-L~~LL 210 (247)
.+++.||.|++=+-+-.++......-..+||..|.= |...|
T Consensus 141 ~~viDiGggst~~~~~~~g~~~~~~~~~~Gg~~~~~~l~~~l 182 (272)
T 3h1q_A 141 GIVVDIGGGTTGIAVIEKGKITATFDEPTGGTHLSLVLAGSY 182 (272)
T ss_dssp EEEEEECSSCEEEEEEETTEEEEECCBSCCHHHHHHHHHHHH
T ss_pred EEEEEECCCcEEEEEEECCEEEEEecCCCcHHHHHHHHHHHh
Confidence 499999999874433334666677777899998854 33444
No 35
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=75.96 E-value=4.2 Score=36.26 Aligned_cols=43 Identities=12% Similarity=-0.014 Sum_probs=34.8
Q ss_pred eEEEEecCCcccchHHHHHHhCCcccee-hhhhhhhhhHHHHHh
Q 025826 101 TLIKATGGGAYKFADLIKEKLGVVLDKE-DEMDCLVTGANFLLK 143 (247)
Q Consensus 101 ~~i~~TGGga~k~~~~~~~~lg~~~~k~-dEm~cli~G~~fLl~ 143 (247)
..|.+|||||..+.+.+++.+++++... |=+.|.+.|..-+++
T Consensus 280 ~~IvltGGGA~l~~~~l~~~~~~~v~v~~~P~~a~a~G~~~~~~ 323 (329)
T 4apw_A 280 DSLIFIGGTTQKLKEQISKTYPNNSIITNNSQWTTCEGLYKVAV 323 (329)
T ss_dssp SEEEEESTTHHHHHHHHHHHSTTCEECCSSGGGHHHHHHHHHHH
T ss_pred cEEEEECChHHHHHHHHHHHcCCCCEecCCChhhHHHHHHHHHh
Confidence 5799999999889999999998655444 467799999877664
No 36
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=67.56 E-value=8.9 Score=36.37 Aligned_cols=23 Identities=26% Similarity=0.338 Sum_probs=19.1
Q ss_pred CCCCCeEEEEcCcceeEEEEEee
Q 025826 18 ESQISHLALDIGGSLIKVVYFLR 40 (247)
Q Consensus 18 ~~~~~~~giDIGGSL~KlvYf~~ 40 (247)
.+.-..+|||+|||-.|++.+..
T Consensus 58 ~E~G~~laiDlGGTnirv~lV~~ 80 (457)
T 2yhx_A 58 AQAGSFLAIVMGGGDLEVILISL 80 (457)
T ss_dssp CCCEEEEEEEECSSEEEEEEEEE
T ss_pred CccceEEEEEeCCCeEEEEEEEe
Confidence 34556799999999999999874
No 37
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=65.03 E-value=8.1 Score=39.72 Aligned_cols=23 Identities=26% Similarity=0.452 Sum_probs=19.0
Q ss_pred CCCCCeEEEEcCcceeEEEEEee
Q 025826 18 ESQISHLALDIGGSLIKVVYFLR 40 (247)
Q Consensus 18 ~~~~~~~giDIGGSL~KlvYf~~ 40 (247)
.+.-..+|||+|||-.|++.++.
T Consensus 75 ~E~G~~laiDlGGTnirv~lv~~ 97 (917)
T 1cza_N 75 SEKGDFIALDLGGSSFRILRVQV 97 (917)
T ss_dssp CCCEEEEEEEESSSSEEEEEEEE
T ss_pred CCcceEEEEEeCCCeEEEEEEEe
Confidence 34556799999999999999873
No 38
>3lm2_A Putative kinase; structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2, transf; HET: MSE; 1.70A {Agrobacterium tumefaciens}
Probab=64.64 E-value=11 Score=32.32 Aligned_cols=49 Identities=10% Similarity=0.098 Sum_probs=31.2
Q ss_pred HHHHhCCccceehhhhhhhhhHHHHHhhcCCcceEeeCCCeeeeecCCCCCccEEEEecCCceEEEEEeCCCceEE
Q 025826 117 IKEKLGVVLDKEDEMDCLVTGANFLLKAVHQEAFTYVDGQKEFVQIDQNDLYPYLLVNIGSGVSMIKVDGDGKFER 192 (247)
Q Consensus 117 ~~~~lg~~~~k~dEm~cli~G~~fLl~~i~~e~f~~~~~~~~~~~~~~~~~~PyLlVNIGSGvSi~kv~~~~~~~R 192 (247)
+++.+++++.-.+...|...|-.+ .-+++++.+|||+-.=.+-+ ++..|
T Consensus 87 l~~~~~~pv~v~NDanaaalge~~--------------------------~~~~~~l~~GtGiG~gii~~-G~l~~ 135 (226)
T 3lm2_A 87 YEGAFGRPVRIVNDALMQAIGSYN--------------------------GGRMLFLGLGTGLGAAMIVE-NVAQP 135 (226)
T ss_dssp HHHHHTSCEEEEEHHHHHHHHHCC--------------------------SSEEEEEEESSSEEEEEEET-TEEEE
T ss_pred hHHhcCCeEEEEEHHHHHHHHHhh--------------------------cCcEEEEEeCCceEEEEEEC-CEEee
Confidence 456778888888888876654211 02478899999886544433 44444
No 39
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=60.81 E-value=34 Score=30.63 Aligned_cols=103 Identities=19% Similarity=0.219 Sum_probs=65.5
Q ss_pred eEEEEecC-Cc-------ccchHHHHHHhCCccceehhhhhhhhhHHHHHhhcCCcceEeeCCCeeeeecCCCCCccEEE
Q 025826 101 TLIKATGG-GA-------YKFADLIKEKLGVVLDKEDEMDCLVTGANFLLKAVHQEAFTYVDGQKEFVQIDQNDLYPYLL 172 (247)
Q Consensus 101 ~~i~~TGG-ga-------~k~~~~~~~~lg~~~~k~dEm~cli~G~~fLl~~i~~e~f~~~~~~~~~~~~~~~~~~PyLl 172 (247)
..|.+|-| |. .-+.+-|...++++++-++-+++.+....+. . ...+|..|
T Consensus 75 d~Iav~~gPG~~t~lrvg~~~ak~La~~~~~Pl~~v~hl~aHa~sa~~~-s---------------------~~~~pl~L 132 (334)
T 3eno_A 75 DLIGFSMGPGLAPSLRVTATAARTISVLTGKPIIGVNHPLGHIEIGRRV-T---------------------GAIDPVML 132 (334)
T ss_dssp CEEEEECSSSCHHHHHHHHHHHHHHHHHHTCCCEEECHHHHHHHHHHHH-H---------------------TCSSCEEE
T ss_pred CEEEEEcCCCCcchHHHHHHHHHHHhhccCCCeEEeccHHHHHHHHHhc-C---------------------CCCCCEEE
Confidence 45677654 22 1233445556788888889888888665443 2 12356777
Q ss_pred EecCCceEEEEEeCCCceEEeecc-ccCchh-HHhhhhhhcCCCCH---HHHHHHHhCCCC
Q 025826 173 VNIGSGVSMIKVDGDGKFERISGT-SVGGGT-FWGLGRLLTNCKSF---DELLELSHQGNN 228 (247)
Q Consensus 173 VNIGSGvSi~kv~~~~~~~RVgGs-siGGGT-~~GL~~LLtg~~~f---deil~lA~~Gd~ 228 (247)
+=-|.+++++.+++ ++|+++|.| -..=|- |=..+++| |.. | -++..||.+|+.
T Consensus 133 ~vsGg~t~l~~~~~-~~~~~lg~t~d~S~G~~fD~vA~~L-Gl~-y~g~~~le~lA~~g~~ 190 (334)
T 3eno_A 133 YVSGGNTQVIAHVN-GRYRVLGETLDIGIGNMIDKFAREA-GIP-FPGGPEIEKLAMKGTK 190 (334)
T ss_dssp EESSSCEEEEEECS-SBEEEEEEBSSCCHHHHHHHHHTTT-TCC-SCHHHHHHTTGGGCCS
T ss_pred EEECCCcEEEEEeC-CEEEEeccCCCccHHHHHHHHHHHc-CCC-CCCHHHHHHHHhcCCC
Confidence 77799999999986 899999986 222233 33333443 432 3 367778999874
No 40
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=58.76 E-value=16 Score=34.42 Aligned_cols=22 Identities=32% Similarity=0.425 Sum_probs=18.5
Q ss_pred CCCCeEEEEcCcceeEEEEEee
Q 025826 19 SQISHLALDIGGSLIKVVYFLR 40 (247)
Q Consensus 19 ~~~~~~giDIGGSL~KlvYf~~ 40 (247)
+.-..+|||+|||-.+++.+.-
T Consensus 66 E~G~~lalDlGGTn~Rv~~V~l 87 (451)
T 1bdg_A 66 ETGNFLALDLGGTNYRVLSVTL 87 (451)
T ss_dssp CCEEEEEEEESSSSEEEEEEEE
T ss_pred ccceEEEEEeCCCeEEEEEEec
Confidence 3455799999999999999884
No 41
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=56.61 E-value=14 Score=35.41 Aligned_cols=23 Identities=35% Similarity=0.496 Sum_probs=18.9
Q ss_pred CCCCeEEEEcCcceeEEEEEeec
Q 025826 19 SQISHLALDIGGSLIKVVYFLRS 41 (247)
Q Consensus 19 ~~~~~~giDIGGSL~KlvYf~~~ 41 (247)
+.-..+|||+|||..|++.+.-.
T Consensus 78 E~G~~LalDlGGTn~Rv~~V~l~ 100 (485)
T 3o8m_A 78 ETGDFLALDLGGTNLRVVLVKLG 100 (485)
T ss_dssp CEEEEEEEEESSSEEEEEEEEEE
T ss_pred cceEEEEEEecCCeEEEEEEEEC
Confidence 33467999999999999998743
No 42
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=56.19 E-value=12 Score=33.48 Aligned_cols=31 Identities=10% Similarity=0.007 Sum_probs=24.2
Q ss_pred cchHHHHHHhCC-ccceehhhhhhhhhHHHHH
Q 025826 112 KFADLIKEKLGV-VLDKEDEMDCLVTGANFLL 142 (247)
Q Consensus 112 k~~~~~~~~lg~-~~~k~dEm~cli~G~~fLl 142 (247)
.+.+++++.+++ ++.-.+...|...|...|-
T Consensus 118 ~l~~~l~~~~~~~pv~v~NDa~aaalge~~l~ 149 (373)
T 2q2r_A 118 RLSDYPKALFPPGHSAILNDLEAGGFGVLAVS 149 (373)
T ss_dssp EGGGSCTTTSCTTSEEEEEHHHHHHHHHHHHH
T ss_pred CHHHHHHHhcCCCCEEEEccHhHHhccccccC
Confidence 555666666888 8999999999998876654
No 43
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=52.07 E-value=9.6 Score=34.08 Aligned_cols=43 Identities=23% Similarity=0.128 Sum_probs=32.8
Q ss_pred eEEEEecCCcccchHHHHHHhCCccc---eehhhhhhhhhHHHHHh
Q 025826 101 TLIKATGGGAYKFADLIKEKLGVVLD---KEDEMDCLVTGANFLLK 143 (247)
Q Consensus 101 ~~i~~TGGga~k~~~~~~~~lg~~~~---k~dEm~cli~G~~fLl~ 143 (247)
..|.+|||||..+.+.+++.++.... -.|=..|.+.|+..++.
T Consensus 298 ~~IvL~GGga~ll~~~l~~~~~~~~i~~~~~~P~~ava~G~~~~~~ 343 (346)
T 2fsj_A 298 TSLIPVGGGSNLIGDRFEEIAPGTLVKIKPEDLQFANALGYRDAAE 343 (346)
T ss_dssp EEEEEESTTHHHHGGGGGGGSTTCBCCCCTTTTTTHHHHHHHHHHH
T ss_pred cEEEEECCcHHHHHHHHHHHCcCcEEeccCCCcHHHHHHHHHHHHh
Confidence 56999999998888888888874322 33556899999887654
No 44
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=49.92 E-value=36 Score=31.86 Aligned_cols=18 Identities=22% Similarity=0.346 Sum_probs=16.2
Q ss_pred eEEEEcCcceeEEEEEee
Q 025826 23 HLALDIGGSLIKVVYFLR 40 (247)
Q Consensus 23 ~~giDIGGSL~KlvYf~~ 40 (247)
.+|||||+|-+|.+-|..
T Consensus 6 ~lgIDiGtT~~k~~l~d~ 23 (503)
T 2w40_A 6 ILSIDQSTQSTKVFFYDE 23 (503)
T ss_dssp EEEEEECSSEEEEEEEET
T ss_pred EEEEEeCCcceEEEEECC
Confidence 589999999999998884
No 45
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=47.97 E-value=35 Score=31.67 Aligned_cols=18 Identities=28% Similarity=0.499 Sum_probs=16.0
Q ss_pred eEEEEcCcceeEEEEEee
Q 025826 23 HLALDIGGSLIKVVYFLR 40 (247)
Q Consensus 23 ~~giDIGGSL~KlvYf~~ 40 (247)
.+|||+|+|-+|.+-|..
T Consensus 2 ~lgiDiGtt~~k~~l~d~ 19 (484)
T 2itm_A 2 YIGIDLGTSGVKVILLNE 19 (484)
T ss_dssp EEEEEECSSEEEEEEECT
T ss_pred EEEEEecCcccEEEEECC
Confidence 489999999999998873
No 46
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=44.82 E-value=45 Score=31.08 Aligned_cols=18 Identities=33% Similarity=0.442 Sum_probs=16.1
Q ss_pred eEEEEcCcceeEEEEEee
Q 025826 23 HLALDIGGSLIKVVYFLR 40 (247)
Q Consensus 23 ~~giDIGGSL~KlvYf~~ 40 (247)
.+|||||+|-+|.+-|..
T Consensus 4 ~lgiDiGtT~~k~~l~d~ 21 (495)
T 2dpn_A 4 LLALDQGTTSSRAILFTL 21 (495)
T ss_dssp EEEEEECSSEEEEEEECT
T ss_pred EEEEeeCCcceEEEEECC
Confidence 589999999999998873
No 47
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=43.21 E-value=16 Score=31.80 Aligned_cols=40 Identities=28% Similarity=0.355 Sum_probs=29.9
Q ss_pred eEEEEecCCcccchHHHHHHhCC---ccce-ehhhhhhhhhHHH
Q 025826 101 TLIKATGGGAYKFADLIKEKLGV---VLDK-EDEMDCLVTGANF 140 (247)
Q Consensus 101 ~~i~~TGGga~k~~~~~~~~lg~---~~~k-~dEm~cli~G~~f 140 (247)
..|.+|||+|.-+.+.+++.++. ++.. .+=..|...|+..
T Consensus 274 ~~vvl~GGga~ll~~~l~~~~~~~~~~~~~~~~P~~a~A~G~~~ 317 (320)
T 2zgy_A 274 THVMVIGGGAELICDAVKKHTQIRDERFFKTNNSQYDLVNGMYL 317 (320)
T ss_dssp CEEEEESTTHHHHHHHHHHTSCCCGGGEECCSCGGGHHHHHHHH
T ss_pred CeEEEECChHHHHHHHHHHHhCCCCCceeeCCCcHHHHHHHHHH
Confidence 56999999998889999998887 3433 3346777777653
No 48
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=43.00 E-value=16 Score=31.86 Aligned_cols=42 Identities=24% Similarity=0.492 Sum_probs=34.4
Q ss_pred EEEEecCCccc--chHHHHHHhCCcccee-hhhhhhhhhHHHHHh
Q 025826 102 LIKATGGGAYK--FADLIKEKLGVVLDKE-DEMDCLVTGANFLLK 143 (247)
Q Consensus 102 ~i~~TGGga~k--~~~~~~~~lg~~~~k~-dEm~cli~G~~fLl~ 143 (247)
.|.+|||+|.- +.+.+++.++.++... |=..|+..|+..+..
T Consensus 280 ~IvL~GG~s~~p~l~~~l~~~~~~~v~~~~~p~~ava~Gaa~~a~ 324 (344)
T 1jce_A 280 GIFLTGGGSLLRGLDTLLQKETGISVIRSEEPLTAVAKGAGMVLD 324 (344)
T ss_dssp CEEEESGGGCSBTHHHHHHHHHSSCEEECSSTTTHHHHHHHHGGG
T ss_pred cEEEECccccchHHHHHHHHHHCCCccccCChHHHHHHHHHHHHh
Confidence 59999999955 8999999999876654 567899999887654
No 49
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=42.64 E-value=50 Score=30.75 Aligned_cols=18 Identities=33% Similarity=0.484 Sum_probs=16.1
Q ss_pred eEEEEcCcceeEEEEEee
Q 025826 23 HLALDIGGSLIKVVYFLR 40 (247)
Q Consensus 23 ~~giDIGGSL~KlvYf~~ 40 (247)
.+|||+|+|-+|.+-|..
T Consensus 5 ~lgiDiGtt~~k~~l~d~ 22 (497)
T 2zf5_O 5 VLSLDEGTTSARAIIFDR 22 (497)
T ss_dssp EEEEEECSSEEEEEEECT
T ss_pred EEEEecCCchhEEEEECC
Confidence 589999999999998874
No 50
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=39.77 E-value=30 Score=30.45 Aligned_cols=34 Identities=26% Similarity=0.448 Sum_probs=26.8
Q ss_pred eEEEEecCCccc--chHHHHHHhCCccceehhhhhh
Q 025826 101 TLIKATGGGAYK--FADLIKEKLGVVLDKEDEMDCL 134 (247)
Q Consensus 101 ~~i~~TGGga~k--~~~~~~~~lg~~~~k~dEm~cl 134 (247)
..|.+|||+|.. +.+.+++.+++++...+-++++
T Consensus 308 ~~IvL~GG~s~~p~l~~~l~~~l~~~v~~~~P~~~v 343 (377)
T 2ych_A 308 EVGYLLGGGSKLRGLASLLTDTLGVNLEPVNPWEAV 343 (377)
T ss_dssp SEEEEESGGGGSTTHHHHHHHHHTSEEEECCGGGGS
T ss_pred CEEEEECccccchhHHHHHHHHhCCCeEecCchhhc
Confidence 569999999954 8999999999877666555543
No 51
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=39.56 E-value=31 Score=32.78 Aligned_cols=42 Identities=19% Similarity=0.338 Sum_probs=29.2
Q ss_pred eEEEEecCCc--ccchHHHHHHhCCccceehhhhhhhhhHHHHH
Q 025826 101 TLIKATGGGA--YKFADLIKEKLGVVLDKEDEMDCLVTGANFLL 142 (247)
Q Consensus 101 ~~i~~TGGga--~k~~~~~~~~lg~~~~k~dEm~cli~G~~fLl 142 (247)
..|.++||+| -.+..++.+.+|++|.+.+.-++...|.-+|.
T Consensus 444 ~~i~~~GG~aks~~~~Qi~ADv~g~pV~~~~~~e~~alGAA~lA 487 (554)
T 3l0q_A 444 DTMMASGGGTKNPIFVQEHANATGCAMLLPEESEAMLLGSAMMG 487 (554)
T ss_dssp CEEEEESGGGGCHHHHHHHHHHHCCEEEEESCSCHHHHHHHHHH
T ss_pred CEEEEeCccccCHHHHHHHHHhhCCeEEecCCCcchHHHHHHHH
Confidence 5699999998 34566677889998877654455555555443
No 52
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=38.86 E-value=63 Score=30.41 Aligned_cols=17 Identities=29% Similarity=0.536 Sum_probs=15.8
Q ss_pred eEEEEcCcceeEEEEEe
Q 025826 23 HLALDIGGSLIKVVYFL 39 (247)
Q Consensus 23 ~~giDIGGSL~KlvYf~ 39 (247)
.+|||+|+|-+|.+-|.
T Consensus 8 ~lgIDiGTts~Ka~l~d 24 (482)
T 3h6e_A 8 TIVIDLGKTLSKVSLWD 24 (482)
T ss_dssp CEEEEECSSEEEEEEEC
T ss_pred EEEEEcCCCCeEEEEEE
Confidence 58999999999999887
No 53
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=38.05 E-value=36 Score=32.22 Aligned_cols=42 Identities=26% Similarity=0.293 Sum_probs=28.7
Q ss_pred eEEEEecCCc--ccchHHHHHHhCCccceehhhhhhhhhHHHHH
Q 025826 101 TLIKATGGGA--YKFADLIKEKLGVVLDKEDEMDCLVTGANFLL 142 (247)
Q Consensus 101 ~~i~~TGGga--~k~~~~~~~~lg~~~~k~dEm~cli~G~~fLl 142 (247)
..|.++||+| --+..++.+.+|++|.....-++-..|.-++.
T Consensus 426 ~~i~~~GGgaks~~~~Qi~ADvlg~pV~~~~~~e~~alGAA~lA 469 (515)
T 3i8b_A 426 TRILLIGGGAKSEAIRTLAPSILGMDVTRPATDEYVAIGAARQA 469 (515)
T ss_dssp CEEEEESGGGGCHHHHHHHHHHHTSCEEEECCCCHHHHHHHHHH
T ss_pred CEEEEECchhcCHHHHHHHHHHhCCceEecCCcccHHHHHHHHH
Confidence 5699999998 34556677788998877654444455554443
No 54
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=37.21 E-value=69 Score=29.92 Aligned_cols=18 Identities=28% Similarity=0.399 Sum_probs=16.2
Q ss_pred eEEEEcCcceeEEEEEee
Q 025826 23 HLALDIGGSLIKVVYFLR 40 (247)
Q Consensus 23 ~~giDIGGSL~KlvYf~~ 40 (247)
.+|||+|+|-+|.+-|..
T Consensus 4 ~lgiDiGtts~k~~l~d~ 21 (504)
T 2d4w_A 4 VLAIDQGTTSSRAIVFDH 21 (504)
T ss_dssp EEEEEECSSEEEEEEECT
T ss_pred EEEEecCCcceEEEEECC
Confidence 589999999999999874
No 55
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=37.10 E-value=19 Score=33.39 Aligned_cols=19 Identities=26% Similarity=0.291 Sum_probs=16.6
Q ss_pred eEEEEcCcceeEEEEEeec
Q 025826 23 HLALDIGGSLIKVVYFLRS 41 (247)
Q Consensus 23 ~~giDIGGSL~KlvYf~~~ 41 (247)
.+|||+|+|-+|.+-|...
T Consensus 6 ~lgiDiGtts~k~~l~d~~ 24 (489)
T 2uyt_A 6 CVAVDLGASSGRVMLARYE 24 (489)
T ss_dssp EEEEEECSSEEEEEEEEEE
T ss_pred EEEEEecCCCceEEEEEec
Confidence 5899999999999888743
No 56
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=37.03 E-value=37 Score=31.87 Aligned_cols=42 Identities=26% Similarity=0.175 Sum_probs=29.2
Q ss_pred eEEEEecCCc--ccchHHHHHHhCCccceehhhhhhhhhHHHHH
Q 025826 101 TLIKATGGGA--YKFADLIKEKLGVVLDKEDEMDCLVTGANFLL 142 (247)
Q Consensus 101 ~~i~~TGGga--~k~~~~~~~~lg~~~~k~dEm~cli~G~~fLl 142 (247)
..|.++||+| -.+..++.+.+|++|...+.-++-..|.-++.
T Consensus 395 ~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~~~~e~~alGaA~lA 438 (504)
T 3ll3_A 395 VAINATGGFLKSDFVRQLCANIFNVPIVTMKEQQSGTLAAMFLA 438 (504)
T ss_dssp SEEEEESGGGCSHHHHHHHHHHHTSCEEEESCSCHHHHHHHHHH
T ss_pred CEEEEeCchhcCHHHHHHHHHhhCCeEEecCCCCchhHHHHHHH
Confidence 5799999998 44566677789998887654455455555443
No 57
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=35.91 E-value=38 Score=31.86 Aligned_cols=42 Identities=14% Similarity=0.151 Sum_probs=28.8
Q ss_pred eEEEEecCCc--ccchHHHHHHhCCccceehhhhhhhhhHHHHH
Q 025826 101 TLIKATGGGA--YKFADLIKEKLGVVLDKEDEMDCLVTGANFLL 142 (247)
Q Consensus 101 ~~i~~TGGga--~k~~~~~~~~lg~~~~k~dEm~cli~G~~fLl 142 (247)
..|.++||+| --+..++.+.+|++|.....-++-..|.-+|.
T Consensus 402 ~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~~~~e~~alGaA~lA 445 (508)
T 3ifr_A 402 QRFFASDGGTRSRVWMGIMADVLQRPVQLLANPLGSAVGAAWVA 445 (508)
T ss_dssp CEEEEESGGGGCHHHHHHHHHHHTSCEEEEECCSTHHHHHHHHH
T ss_pred CEEEEeCCcccCHHHHHHHHHHhCCeEEecCCCCchHHHHHHHH
Confidence 5699999998 34456667788998877664444445555444
No 58
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=35.63 E-value=14 Score=33.38 Aligned_cols=40 Identities=28% Similarity=0.236 Sum_probs=30.6
Q ss_pred eEEEEecCCcccchH----HHHHHhCCccceehhhhhhhhhHHHHHh
Q 025826 101 TLIKATGGGAYKFAD----LIKEKLGVVLDKEDEMDCLVTGANFLLK 143 (247)
Q Consensus 101 ~~i~~TGGga~k~~~----~~~~~lg~~~~k~dEm~cli~G~~fLl~ 143 (247)
..|.+|||||.-+.+ .+++.+.. . .|=..|.++|...+..
T Consensus 292 ~~Ivl~GGGa~l~~~~l~~~i~~~~~~--~-~~p~~anA~G~~~~~~ 335 (355)
T 3js6_A 292 DRIIVTGGGANIHFDSLSHYYSDVFEK--A-DDSQFSNVRGYEKLGE 335 (355)
T ss_dssp SEEEEESTTHHHHHHHHHHHSSSCEEC--C-SSGGGHHHHHHHHHHH
T ss_pred cEEEEECcchhcchhhHHHHHHHHCCC--C-CCcHHHHHHHHHHHHH
Confidence 469999999987774 66665532 2 7888999999887765
No 59
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=35.47 E-value=62 Score=28.46 Aligned_cols=42 Identities=17% Similarity=0.132 Sum_probs=32.6
Q ss_pred eEEEEecCCccc--chHHHHHHhCCccce-ehhhhhhhhhHHHHH
Q 025826 101 TLIKATGGGAYK--FADLIKEKLGVVLDK-EDEMDCLVTGANFLL 142 (247)
Q Consensus 101 ~~i~~TGGga~k--~~~~~~~~lg~~~~k-~dEm~cli~G~~fLl 142 (247)
..|.+|||++.- +.+.+++.++.++.. .+-.+|+..|+..+-
T Consensus 335 ~~IvL~GG~s~~p~l~~~l~~~~~~~v~~~~~p~~ava~Gaa~~a 379 (383)
T 1dkg_D 335 DDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQG 379 (383)
T ss_dssp CEEEEESGGGGSHHHHHHHHHHHSSCCBCSSCTTTHHHHHHHHHT
T ss_pred CEEEEecCccccHHHHHHHHHHhCCCCCCCcChHHHHHHHHHHHH
Confidence 579999999954 889999999976543 455778888887653
No 60
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=35.27 E-value=61 Score=28.44 Aligned_cols=42 Identities=21% Similarity=0.264 Sum_probs=33.3
Q ss_pred eEEEEecCCc--ccchHHHHHHh-CCcccee-hhhhhhhhhHHHHH
Q 025826 101 TLIKATGGGA--YKFADLIKEKL-GVVLDKE-DEMDCLVTGANFLL 142 (247)
Q Consensus 101 ~~i~~TGGga--~k~~~~~~~~l-g~~~~k~-dEm~cli~G~~fLl 142 (247)
..|.+|||++ -.+.+.+++.+ +.++... +-.+|+..|+..+-
T Consensus 345 ~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a 390 (394)
T 3qfu_A 345 DDIVLVGGSTRIPKVQQLLESYFDGKKASKGINPDEAVAYGAAVQA 390 (394)
T ss_dssp CEEEEESGGGGSHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHH
T ss_pred CEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHH
Confidence 5799999999 45889999999 6766544 67788888887654
No 61
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=35.12 E-value=27 Score=32.88 Aligned_cols=56 Identities=18% Similarity=0.268 Sum_probs=34.2
Q ss_pred EEEEecCCceEEEEEeC---------------CCceEEeeccccCchhHHhhhhhh--cCCC-CHHHHHHHHhC
Q 025826 170 YLLVNIGSGVSMIKVDG---------------DGKFERISGTSVGGGTFWGLGRLL--TNCK-SFDELLELSHQ 225 (247)
Q Consensus 170 yLlVNIGSGvSi~kv~~---------------~~~~~RVgGssiGGGT~~GL~~LL--tg~~-~fdeil~lA~~ 225 (247)
-+.+++||+..+..+.+ ++.|--.|++.-||..+-=+...+ .+.. +++++.++|++
T Consensus 260 ~~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~G~~~~W~~~~~~~~~~~~~~~~l~~~a~~ 333 (508)
T 3ifr_A 260 DVLLKFGGAGDIIVASATAKSDPRLYLDYHLVPGLYAPNGCMAATGSALNWLAKLLAPEAGEAAHAQLDALAAE 333 (508)
T ss_dssp EEEEEESSSEEEEECBSCCCCBTTBBCCBCSSTTCBCCEEEESSSHHHHHHHHHHHSTTCTTHHHHHHHHHHHT
T ss_pred cEEEEechhhhheeeCCCcccCCCcceeeeecCCceEEechhhhhHHHHHHHHHHHhhcCCCCCHHHHHHHHhc
Confidence 57889999877665543 223333345555665553344444 2432 79999999875
No 62
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=35.09 E-value=21 Score=33.59 Aligned_cols=58 Identities=12% Similarity=0.151 Sum_probs=33.5
Q ss_pred EEEEecCCceEEEEEeCC----------------CceEEeeccccCchhHHhhhhhhcC-CCCHHHHHHHHhCCC
Q 025826 170 YLLVNIGSGVSMIKVDGD----------------GKFERISGTSVGGGTFWGLGRLLTN-CKSFDELLELSHQGN 227 (247)
Q Consensus 170 yLlVNIGSGvSi~kv~~~----------------~~~~RVgGssiGGGT~~GL~~LLtg-~~~fdeil~lA~~Gd 227 (247)
-+.+++||+..+..+.+. +.|---|++..||..+-=|...+.. ..++++++++|++-.
T Consensus 254 ~~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~G~~~~W~~~~~~~~~~~~~~~~~~a~~~~ 328 (504)
T 3ll3_A 254 HCALNVGTSGAIRTIVDQPKIDPSASYFCYPADKTHYLLGGPVNNGGIVFNWARQTLFDADETPQDFLDVAQTAP 328 (504)
T ss_dssp EEEEEESSSEEEEEEESSCCCCTTCCSEEEEEETTEEEEEEEESCSHHHHHHHHHHHTCTTCCHHHHHHHHHTSC
T ss_pred cEEEEechhhhheeeCCCcccCCCCceEEEEeCCCeEEEEeehhhHHHHHHHHHHHhccchhHHHHHHHHHhcCC
Confidence 578899998766555431 1122224456666666445444433 356778777776543
No 63
>2wq4_A Lectin; LUNG, pathogen, infection, sugar binding protein; HET: SFU; 1.42A {Burkholderia cenocepacia}
Probab=34.96 E-value=30 Score=27.77 Aligned_cols=43 Identities=30% Similarity=0.641 Sum_probs=27.6
Q ss_pred CCcceEeeCCCeeeeecCCCCCccEEEE---ecCCceEEEEEeCCCceEEeeccc
Q 025826 146 HQEAFTYVDGQKEFVQIDQNDLYPYLLV---NIGSGVSMIKVDGDGKFERISGTS 197 (247)
Q Consensus 146 ~~e~f~~~~~~~~~~~~~~~~~~PyLlV---NIGSGvSi~kv~~~~~~~RVgGss 197 (247)
.+-+|+|+..-.+ .....||-|| .+||||+++|. ++..|-||.
T Consensus 70 a~g~ftysskipe-----~sgrmpftlva~~~~~s~vs~ik~----qw~~irgs~ 115 (156)
T 2wq4_A 70 ADGCFTYSSKVPE-----STGRMPFTLVATIDVGSGVTFVKG----QWKSVRGSA 115 (156)
T ss_dssp EEEEEECSSSSCS-----SCCCCCEEEEEEEEGGGTCCCEEE----EEEEETTCE
T ss_pred eecceeecccCCc-----ccCccceEEEEEEEecCCceEeee----eeeccccce
Confidence 3456777654322 2356788877 58999999986 455555554
No 64
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=32.31 E-value=54 Score=29.26 Aligned_cols=43 Identities=12% Similarity=0.101 Sum_probs=34.2
Q ss_pred eEEEEecCCcc--cchHHHHHHhCCc---------cceehhhhhhhhhHHHHHh
Q 025826 101 TLIKATGGGAY--KFADLIKEKLGVV---------LDKEDEMDCLVTGANFLLK 143 (247)
Q Consensus 101 ~~i~~TGGga~--k~~~~~~~~lg~~---------~~k~dEm~cli~G~~fLl~ 143 (247)
..|.+|||++. ...+.+++.++.+ ....+=.+|+..|+-+...
T Consensus 346 ~~V~LvGG~s~~p~v~~~l~~~f~~~~~v~~P~~~~~~~~p~~ava~GAa~~~~ 399 (409)
T 4gni_A 346 DEVIMSGGTSNTPRIAANFRYIFPESTRILAPSTDPSALNPSELQARGAALQAS 399 (409)
T ss_dssp CEEEEESGGGGCHHHHHHHHHHSCTTSEEESTTTCTTCCCTTTHHHHHHHHHHH
T ss_pred CEEEEECCccccHHHHHHHHHHcCCccccccccccCCCcCHHHHHHHHHHHHhh
Confidence 56999999984 7788999999865 2456777899999887764
No 65
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=32.07 E-value=2.9e+02 Score=25.83 Aligned_cols=91 Identities=14% Similarity=0.106 Sum_probs=59.0
Q ss_pred hHHHHHHhCCccceehhhhhhhhhHHHHHhhcCCcceEeeCCCeeeeecCCCCCccEEEEecCCceEEEEEeCCCceEEe
Q 025826 114 ADLIKEKLGVVLDKEDEMDCLVTGANFLLKAVHQEAFTYVDGQKEFVQIDQNDLYPYLLVNIGSGVSMIKVDGDGKFERI 193 (247)
Q Consensus 114 ~~~~~~~lg~~~~k~dEm~cli~G~~fLl~~i~~e~f~~~~~~~~~~~~~~~~~~PyLlVNIGSGvSi~kv~~~~~~~RV 193 (247)
+.-+...++++++-++.+++.+....+- . ...+|..|+=-|-.+.++.+++ ++|+++
T Consensus 95 ak~la~~~~~p~~~v~h~~aH~~~~~~~-~---------------------~~~~p~~l~vsGg~t~~~~~~~-~~~~~l 151 (540)
T 3en9_A 95 ARTLSLTLKKPIIGVNHCIAHIEIGKLT-T---------------------EAEDPLTLYVSGGNTQVIAYVS-KKYRVF 151 (540)
T ss_dssp HHHHHHHHTCCEEEEEHHHHHHHHHHHH-S---------------------SCSSCEEEEECSSCEEEEEEET-TEEEEE
T ss_pred HHHHHHHhCCCeeEeccHHHHHHHHHHh-c---------------------CCCCCcEEEEcCCCcEEEEEeC-CceEEE
Confidence 3446667899999999999998765432 1 1235666666677788889987 889999
Q ss_pred eccc-cCch-hHHhhhhhhc-CCCCHHHHHHHHhCCC
Q 025826 194 SGTS-VGGG-TFWGLGRLLT-NCKSFDELLELSHQGN 227 (247)
Q Consensus 194 gGss-iGGG-T~~GL~~LLt-g~~~fdeil~lA~~Gd 227 (247)
|.|. ..=| .|=-.+++|- +-..=-.+-+||++|+
T Consensus 152 g~t~d~s~G~~~D~~a~~lgl~~~gg~~ie~lA~~g~ 188 (540)
T 3en9_A 152 GETLDIAVGNCLDQFARYVNLPHPGGPYIEELARKGK 188 (540)
T ss_dssp EEBSSSCHHHHHHHHHHHTTCCSSCHHHHHHHHHTCC
T ss_pred eeccchHhHHHHHHHHHHcCCCCCCHHHHHHHHHcCC
Confidence 9863 2222 2333344441 1122247778899997
No 66
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=30.45 E-value=51 Score=31.09 Aligned_cols=42 Identities=17% Similarity=0.377 Sum_probs=29.9
Q ss_pred eEEEEecCCc--ccchHHHHHHhCCccceehhhhhhhhhHHHHH
Q 025826 101 TLIKATGGGA--YKFADLIKEKLGVVLDKEDEMDCLVTGANFLL 142 (247)
Q Consensus 101 ~~i~~TGGga--~k~~~~~~~~lg~~~~k~dEm~cli~G~~fLl 142 (247)
..|.++||+| -.+..++.+.+|++|.+.+.-++-..|.-+|.
T Consensus 404 ~~i~v~GGgaks~~~~Qi~ADvlg~pV~~~~~~E~~alGAA~lA 447 (526)
T 3ezw_A 404 HALRVDGGAVANNFLMQFQSDILGTRVERPEVREVTALGAAYLA 447 (526)
T ss_dssp SEEEEESGGGGCHHHHHHHHHHHTSEEEEESCCCHHHHHHHHHH
T ss_pred CEEEEECchhhCHHHHHHHHHHHCCEEEeCCCCchHHHHHHHHH
Confidence 5799999998 44566777889998876655555555655554
No 67
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=29.75 E-value=88 Score=27.66 Aligned_cols=43 Identities=23% Similarity=0.340 Sum_probs=33.2
Q ss_pred eEEEEecCCc--ccchHHHHHHh-CCcccee-hhhhhhhhhHHHHHh
Q 025826 101 TLIKATGGGA--YKFADLIKEKL-GVVLDKE-DEMDCLVTGANFLLK 143 (247)
Q Consensus 101 ~~i~~TGGga--~k~~~~~~~~l-g~~~~k~-dEm~cli~G~~fLl~ 143 (247)
..|.+|||++ -.+.+.+++.+ +.++... +=.+|+..|+-.+-.
T Consensus 353 ~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~ 399 (404)
T 3i33_A 353 QEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAA 399 (404)
T ss_dssp CEEEEESGGGGCHHHHHHHHHHTTTCCCBCSSCTTTHHHHHHHHHHH
T ss_pred CEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHHH
Confidence 5699999999 45889999999 6766544 667888888876543
No 68
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=29.22 E-value=51 Score=31.48 Aligned_cols=41 Identities=12% Similarity=0.127 Sum_probs=26.4
Q ss_pred eEEEEecCCc---ccchHHHHHHhCCccceehhhhhhhhhHHHH
Q 025826 101 TLIKATGGGA---YKFADLIKEKLGVVLDKEDEMDCLVTGANFL 141 (247)
Q Consensus 101 ~~i~~TGGga---~k~~~~~~~~lg~~~~k~dEm~cli~G~~fL 141 (247)
..|.++|||| -.+..++.+.+|++|.....-++-..|.-++
T Consensus 441 ~~i~~~GGga~ks~~~~Qi~ADv~g~pV~~~~~~e~~alGaA~l 484 (572)
T 3jvp_A 441 HELYACGGLPQKNHLLMQIFADVTNREIKVAASKQTPALGAAMF 484 (572)
T ss_dssp EEEEEESSHHHHCHHHHHHHHHHHTSCEEEBCCSSHHHHHHHHH
T ss_pred CEEEEEcCchhhCHHHHHHHHHHHCCeeEecCCCccHHHHHHHH
Confidence 6799999998 2345666778898886554434434444333
No 69
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=28.41 E-value=33 Score=32.26 Aligned_cols=20 Identities=25% Similarity=0.398 Sum_probs=17.2
Q ss_pred CeEEEEcCcceeEEEEEeec
Q 025826 22 SHLALDIGGSLIKVVYFLRS 41 (247)
Q Consensus 22 ~~~giDIGGSL~KlvYf~~~ 41 (247)
..+|||+|+|-+|.+-|...
T Consensus 6 ~~lgIDiGtts~k~~l~d~~ 25 (506)
T 3h3n_X 6 YVMAIDQGTTSSRAIIFDRN 25 (506)
T ss_dssp EEEEEEECSSEEEEEEEETT
T ss_pred EEEEEEcCCCceEEEEECCC
Confidence 46899999999999998843
No 70
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=28.39 E-value=60 Score=30.32 Aligned_cols=42 Identities=14% Similarity=0.313 Sum_probs=28.7
Q ss_pred eEEEEecCCc--ccchHHHHHHhCCccceehhhhhhhhhHHHHH
Q 025826 101 TLIKATGGGA--YKFADLIKEKLGVVLDKEDEMDCLVTGANFLL 142 (247)
Q Consensus 101 ~~i~~TGGga--~k~~~~~~~~lg~~~~k~dEm~cli~G~~fLl 142 (247)
..|.++||+| --+..++.+.+|++|.+...-++-..|.-++.
T Consensus 406 ~~i~~~GG~aks~~~~Qi~Adv~g~pV~~~~~~e~~alGaA~la 449 (501)
T 3g25_A 406 QSLRVDGGAVKNNFIMQFQADIVNTSVERPEIQETTALGAAFLA 449 (501)
T ss_dssp SEEEEESGGGGCHHHHHHHHHHHTSEEEEESCCCHHHHHHHHHH
T ss_pred cEEEEecchhcCHHHHHHHHHHhCCceEecCCCcchHHHHHHHH
Confidence 5699999998 34566677889998876654454455554443
No 71
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=28.16 E-value=31 Score=32.65 Aligned_cols=18 Identities=28% Similarity=0.388 Sum_probs=16.3
Q ss_pred eEEEEcCcceeEEEEEee
Q 025826 23 HLALDIGGSLIKVVYFLR 40 (247)
Q Consensus 23 ~~giDIGGSL~KlvYf~~ 40 (247)
.+|||+|+|-+|++-|..
T Consensus 28 ~lgIDiGtts~k~~l~d~ 45 (520)
T 4e1j_A 28 ILAIDQGTTSTRAIVFDG 45 (520)
T ss_dssp EEEEEECSSEEEEEEECT
T ss_pred EEEEEeCCcceEEEEECC
Confidence 699999999999998874
No 72
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=28.13 E-value=61 Score=30.43 Aligned_cols=42 Identities=17% Similarity=0.377 Sum_probs=28.1
Q ss_pred eEEEEecCCc--ccchHHHHHHhCCccceehhhhhhhhhHHHHH
Q 025826 101 TLIKATGGGA--YKFADLIKEKLGVVLDKEDEMDCLVTGANFLL 142 (247)
Q Consensus 101 ~~i~~TGGga--~k~~~~~~~~lg~~~~k~dEm~cli~G~~fLl 142 (247)
..|.++||+| -.+..++.+.+|++|.+...-++-..|.-+|.
T Consensus 403 ~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~~~~e~~alGaA~lA 446 (510)
T 2p3r_A 403 HALRVDGGAVANNFLMQFQSDILGTRVERPEVREVTALGAAYLA 446 (510)
T ss_dssp SEEEEESGGGGCHHHHHHHHHHHTSEEEEESCCCHHHHHHHHHH
T ss_pred cEEEEeCchhcCHHHHHHHHHHhCCceEecCCCCcHHHHHHHHH
Confidence 5699999998 44566677889998876554444444544443
No 73
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=28.08 E-value=49 Score=26.45 Aligned_cols=32 Identities=19% Similarity=0.224 Sum_probs=23.1
Q ss_pred ccchHHHHHHhCCccceehhhhhhhhhHHHHH
Q 025826 111 YKFADLIKEKLGVVLDKEDEMDCLVTGANFLL 142 (247)
Q Consensus 111 ~k~~~~~~~~lg~~~~k~dEm~cli~G~~fLl 142 (247)
..|...+...+++++.-+||=-+.+..-..|.
T Consensus 79 r~f~~~L~~~~~lpV~~vDEr~Ts~~Ak~~l~ 110 (150)
T 1vhx_A 79 QTFAKVLETTYNVPVVLWDERLTTMAAEKMLI 110 (150)
T ss_dssp HHHHHHHHHHHCSCEEEECCSSCHHHHHHHHH
T ss_pred HHHHHHHHHhhCCCEEEecCCCCHHHHHHHHH
Confidence 46666777778899999998766666555553
No 74
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=27.88 E-value=32 Score=32.26 Aligned_cols=19 Identities=21% Similarity=0.406 Sum_probs=16.7
Q ss_pred eEEEEcCcceeEEEEEeec
Q 025826 23 HLALDIGGSLIKVVYFLRS 41 (247)
Q Consensus 23 ~~giDIGGSL~KlvYf~~~ 41 (247)
.+|||+|+|-+|.+-|...
T Consensus 8 ~lgIDiGtts~k~~l~d~~ 26 (501)
T 3g25_A 8 ILSIDQGTTSSRAILFNQK 26 (501)
T ss_dssp EEEEEECSSEEEEEEECTT
T ss_pred EEEEEeCccceEEEEEcCC
Confidence 6899999999999998743
No 75
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=27.86 E-value=35 Score=30.06 Aligned_cols=36 Identities=31% Similarity=0.619 Sum_probs=24.8
Q ss_pred ccEEEEecCCceE---EEEEeCCCceEEe--ec-cccCchhHH
Q 025826 168 YPYLLVNIGSGVS---MIKVDGDGKFERI--SG-TSVGGGTFW 204 (247)
Q Consensus 168 ~PyLlVNIGSGvS---i~kv~~~~~~~RV--gG-ssiGGGT~~ 204 (247)
..+|++.+|.||+ ++++.. ..|+.+ +| ..+||-.|-
T Consensus 206 ~~vlV~D~Gggt~dvsv~~~~~-~~~~~~~~~~~~~lGG~~~d 247 (394)
T 3qfu_A 206 HQIIVYDLGGGTFDVSLLSIEN-GVFEVQATSGDTHLGGEDFD 247 (394)
T ss_dssp EEEEEEEECSSCEEEEEEEEET-TEEEEEEEEEETTCSHHHHH
T ss_pred ceEEEEEcCCCceeEEEEEEeC-CEEEEEEEcCCCCCChHHHH
Confidence 3479999999976 666655 555443 33 678887764
No 76
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=27.77 E-value=61 Score=30.02 Aligned_cols=41 Identities=27% Similarity=0.344 Sum_probs=28.7
Q ss_pred eEEEEecCCcc--cchHHHHHHhCCccceehhhhh-hhhhHHHH
Q 025826 101 TLIKATGGGAY--KFADLIKEKLGVVLDKEDEMDC-LVTGANFL 141 (247)
Q Consensus 101 ~~i~~TGGga~--k~~~~~~~~lg~~~~k~dEm~c-li~G~~fL 141 (247)
..|.++||+|. -+..++.+.+|+++...+.-++ -..|.-.+
T Consensus 388 ~~i~~~GG~a~s~~~~Qi~Adv~g~pV~~~~~~e~~~alGAA~l 431 (484)
T 2itm_A 388 QSVTLIGGGARSEYWRQMLADISGQQLDYRTGGDVGPALGAARL 431 (484)
T ss_dssp SCEEEESGGGCCHHHHHHHHHHHCCCEEEESCTTSCHHHHHHHH
T ss_pred ceEEEEeccccCHHHHHHHHHHhCCeEEeCCCCCcccHHHHHHH
Confidence 45999999995 6777888889998877665442 33344433
No 77
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=27.17 E-value=35 Score=32.30 Aligned_cols=55 Identities=16% Similarity=0.249 Sum_probs=36.2
Q ss_pred EEEEecCCceEEEEEeC----------------CCceEEeeccccCchhHHhhhhhhcCCCCHHHHHHHHhCC
Q 025826 170 YLLVNIGSGVSMIKVDG----------------DGKFERISGTSVGGGTFWGLGRLLTNCKSFDELLELSHQG 226 (247)
Q Consensus 170 yLlVNIGSGvSi~kv~~----------------~~~~~RVgGssiGGGT~~GL~~LLtg~~~fdeil~lA~~G 226 (247)
-+.+++||+..+..+.. ++.|...+++..||..+-=+...+ +. +++++.++|++=
T Consensus 288 ~~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~gg~~l~w~~~~~-~~-~~~~l~~~a~~~ 358 (515)
T 3i8b_A 288 DVSISLGTSGVAAAISENPTYDLTGAVSGFADCTGHYLPLACTINGSRILDAGRAAL-GV-DYDELAKLAFAS 358 (515)
T ss_dssp EEEEEESSSEEEEECBSSCCCCTTSCSEEEECSSSSEEEEEEESCSTHHHHHHHHHH-TC-CHHHHHHHHHHS
T ss_pred cEEEEechhhhhhcccCccccCCCCcEEeeecCCCCEEEeeecccHHHHHHHHHHHh-CC-CHHHHHHHHHhC
Confidence 57889999876654322 233555666677777765555544 33 799999998653
No 78
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=26.64 E-value=34 Score=32.20 Aligned_cols=20 Identities=25% Similarity=0.232 Sum_probs=17.0
Q ss_pred CeEEEEcCcceeEEEEEeec
Q 025826 22 SHLALDIGGSLIKVVYFLRS 41 (247)
Q Consensus 22 ~~~giDIGGSL~KlvYf~~~ 41 (247)
..+|||+|+|-+|.+-|...
T Consensus 4 ~~lgIDiGtts~k~~l~d~~ 23 (510)
T 2p3r_A 4 YIVALDQGTTSSRAVVMDHD 23 (510)
T ss_dssp EEEEEEECSSEEEEEEECTT
T ss_pred EEEEEEcCCcceEEEEECCC
Confidence 35899999999999998743
No 79
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=26.47 E-value=37 Score=32.29 Aligned_cols=20 Identities=15% Similarity=0.223 Sum_probs=17.1
Q ss_pred CeEEEEcCcceeEEEEEeec
Q 025826 22 SHLALDIGGSLIKVVYFLRS 41 (247)
Q Consensus 22 ~~~giDIGGSL~KlvYf~~~ 41 (247)
..+|||+|+|-+|.+-|...
T Consensus 6 ~~lgIDiGtts~ka~l~d~~ 25 (554)
T 3l0q_A 6 YFIGVDVGTGSARAGVFDLQ 25 (554)
T ss_dssp EEEEEEECSSEEEEEEEETT
T ss_pred EEEEEEECcccEEEEEECCC
Confidence 36899999999999888754
No 80
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=25.76 E-value=72 Score=29.84 Aligned_cols=42 Identities=21% Similarity=0.424 Sum_probs=28.0
Q ss_pred eEEEEecCCc--ccchHHHHHHhCCccceehhhhhhhhhHHHHH
Q 025826 101 TLIKATGGGA--YKFADLIKEKLGVVLDKEDEMDCLVTGANFLL 142 (247)
Q Consensus 101 ~~i~~TGGga--~k~~~~~~~~lg~~~~k~dEm~cli~G~~fLl 142 (247)
..|.++||+| -.+..++.+.+|++|.+...-++-..|.-++.
T Consensus 405 ~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~~~~e~~alGaA~lA 448 (506)
T 3h3n_X 405 PLLKVDGGAAKNDLLMQFQADILDIDVQRAANLETTALGAAYLA 448 (506)
T ss_dssp CEEEEESGGGGCHHHHHHHHHHHTSEEEECSSSCHHHHHHHHHH
T ss_pred CEEEEecccccCHHHHHHHHHHhCCeEEecCCCcchhHHHHHHH
Confidence 5699999998 34566677889998876554444444444443
No 81
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=25.44 E-value=64 Score=30.42 Aligned_cols=42 Identities=17% Similarity=0.268 Sum_probs=28.6
Q ss_pred eEEEEecCCc--ccchHHHHHHhCCccceehhhhhhhhhHHHHH
Q 025826 101 TLIKATGGGA--YKFADLIKEKLGVVLDKEDEMDCLVTGANFLL 142 (247)
Q Consensus 101 ~~i~~TGGga--~k~~~~~~~~lg~~~~k~dEm~cli~G~~fLl 142 (247)
..|.++||+| --+..++.+.+|++|.+.+.-++-..|.-+|.
T Consensus 427 ~~i~~~GGgaks~~~~Qi~ADvlg~pV~~~~~~e~~alGAA~lA 470 (520)
T 4e1j_A 427 TVLRVDGGMVASDWTMQRLSDLLDAPVDRPVILETTALGVAWLA 470 (520)
T ss_dssp CCEEEESGGGGCHHHHHHHHHHHTSCEEEESCCCHHHHHHHHHH
T ss_pred ceEEEeCccccCHHHHHHHHHHhCCeEEecCCCccHHHHHHHHH
Confidence 4599999998 34556677789998876554444445555443
No 82
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=25.36 E-value=51 Score=30.28 Aligned_cols=18 Identities=33% Similarity=0.497 Sum_probs=13.6
Q ss_pred CeEEEEcCcceeEEEEEe
Q 025826 22 SHLALDIGGSLIKVVYFL 39 (247)
Q Consensus 22 ~~~giDIGGSL~KlvYf~ 39 (247)
+.+|+||||=-+|++.++
T Consensus 1 ~iiG~DIGGAn~K~a~~~ 18 (334)
T 3cet_A 1 MILGIDIGGANTKITELH 18 (334)
T ss_dssp CEEEEEEC--CEEEEEEC
T ss_pred CeeEEEecccceeeeeec
Confidence 468999999999998854
No 83
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=24.94 E-value=55 Score=27.20 Aligned_cols=38 Identities=18% Similarity=0.202 Sum_probs=27.1
Q ss_pred eEEEEecCCc--ccchHHHHHHhCCcccee-hhhhhhhhhH
Q 025826 101 TLIKATGGGA--YKFADLIKEKLGVVLDKE-DEMDCLVTGA 138 (247)
Q Consensus 101 ~~i~~TGGga--~k~~~~~~~~lg~~~~k~-dEm~cli~G~ 138 (247)
..|.+|||+| ..+.+.+++.+++++... +=..|...|+
T Consensus 228 ~~ivL~GG~a~~~~l~~~l~~~l~~~v~~~~~p~~a~a~Ga 268 (272)
T 3h1q_A 228 LPVYVVGGTAYLTGFSEEFSRFLGKEVQVPIHPLLVTPLGI 268 (272)
T ss_dssp CCEEEESGGGGSTTHHHHHHHHHSSCCBCCSSGGGHHHHHH
T ss_pred CEEEEECCccchhhHHHHHHHHhCCCccccCChHHHHHHHH
Confidence 3599999999 457899999999877643 3334555554
No 84
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=24.93 E-value=38 Score=31.86 Aligned_cols=19 Identities=26% Similarity=0.309 Sum_probs=16.6
Q ss_pred eEEEEcCcceeEEEEEeec
Q 025826 23 HLALDIGGSLIKVVYFLRS 41 (247)
Q Consensus 23 ~~giDIGGSL~KlvYf~~~ 41 (247)
.+|||+|+|-+|.+-|...
T Consensus 7 ~lgIDiGtts~k~~l~d~~ 25 (511)
T 3hz6_A 7 IATFDIGTTEVKAALADRD 25 (511)
T ss_dssp EEEEEECSSEEEEEEECTT
T ss_pred EEEEEeCCCceEEEEECCC
Confidence 6899999999999988743
No 85
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=24.52 E-value=43 Score=31.22 Aligned_cols=42 Identities=14% Similarity=0.202 Sum_probs=30.4
Q ss_pred eEEEEecCCcc--cchHHHHHHhCCccceehhhhhhhhhHHHHH
Q 025826 101 TLIKATGGGAY--KFADLIKEKLGVVLDKEDEMDCLVTGANFLL 142 (247)
Q Consensus 101 ~~i~~TGGga~--k~~~~~~~~lg~~~~k~dEm~cli~G~~fLl 142 (247)
..|.++||+|. -+..++.+.+|+++.....-++-..|.-.+.
T Consensus 395 ~~i~~~GG~a~s~~~~Qi~Adv~g~pV~~~~~~e~~alGaA~lA 438 (497)
T 2zf5_O 395 KELRVDGGATANDFLMQFQADILNRKVIRPVVKETTALGAAYLA 438 (497)
T ss_dssp CCEEEESGGGGCHHHHHHHHHHHTSCEEEESCSCHHHHHHHHHH
T ss_pred ceEEEeCccccCHHHHHHHHhhcCCeEEEcCCCcchHHHHHHHH
Confidence 45999999995 6777888889998876665555455555443
No 86
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=24.41 E-value=42 Score=32.06 Aligned_cols=19 Identities=16% Similarity=0.125 Sum_probs=17.0
Q ss_pred CeEEEEcCcceeEEEEEee
Q 025826 22 SHLALDIGGSLIKVVYFLR 40 (247)
Q Consensus 22 ~~~giDIGGSL~KlvYf~~ 40 (247)
..+|||+|+|-+|.+-|..
T Consensus 6 ~~lgIDiGTts~Ka~l~d~ 24 (572)
T 3jvp_A 6 YTIGVDYGTESGRAVLIDL 24 (572)
T ss_dssp EEEEEEECSSEEEEEEEET
T ss_pred EEEEEecCCcceEEEEEEC
Confidence 4689999999999999885
No 87
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=24.20 E-value=63 Score=33.15 Aligned_cols=23 Identities=30% Similarity=0.447 Sum_probs=19.6
Q ss_pred CCCCCeEEEEcCcceeEEEEEee
Q 025826 18 ESQISHLALDIGGSLIKVVYFLR 40 (247)
Q Consensus 18 ~~~~~~~giDIGGSL~KlvYf~~ 40 (247)
.+.-..+|||+|||-.+++.+.-
T Consensus 523 ~E~G~~lalDlGGTn~Rv~~V~l 545 (917)
T 1cza_N 523 TENGDFLALDLGGTNFRVLLVKI 545 (917)
T ss_dssp CCCEEEEEEEESSSSEEEEEEEE
T ss_pred CcceEEEEEEECCCcEEEEEEEe
Confidence 45567799999999999999884
No 88
>2ko4_A Mediator of RNA polymerase II transcription subun; GAL11, mediator, activator, CO-activator, MED15, trans nucleus, phosphoprotein, transcription regulation; NMR {Saccharomyces cerevisiae} PDB: 2lpb_A
Probab=22.77 E-value=11 Score=27.99 Aligned_cols=29 Identities=21% Similarity=0.335 Sum_probs=24.8
Q ss_pred CCCCHHHHHHHHhCCCCCcCce-EeeeecC
Q 025826 212 NCKSFDELLELSHQGNNRVIDM-LVGDIYG 240 (247)
Q Consensus 212 g~~~fdeil~lA~~Gd~~~vDm-lV~DIYG 240 (247)
|.+++.++.+||+++-...-|| +++|||+
T Consensus 35 gVnTW~qI~el~qkk~i~~~~m~iik~iy~ 64 (81)
T 2ko4_A 35 NINTWQQVTALAQQKLLTPQDMEAAKEVYK 64 (81)
T ss_dssp TTCBHHHHHHHHTTTSSCHHHHHHHHHHHH
T ss_pred CcchHHHHHHHHHcCCCCHHHHHHHHHHHH
Confidence 7899999999999999888888 4677775
No 89
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=22.52 E-value=55 Score=29.03 Aligned_cols=21 Identities=19% Similarity=0.371 Sum_probs=17.7
Q ss_pred CCCeEEEEcCcceeEEEEEee
Q 025826 20 QISHLALDIGGSLIKVVYFLR 40 (247)
Q Consensus 20 ~~~~~giDIGGSL~KlvYf~~ 40 (247)
..+.+|||.|.|.++++|+.+
T Consensus 22 ~~~viGID~GTt~s~va~~~~ 42 (404)
T 3i33_A 22 SMPAIGIDLGTTYSCVGVFQH 42 (404)
T ss_dssp -CCCEEEEECSSEEEEEEEET
T ss_pred cCCEEEEEcCCccEEEEEEEC
Confidence 456799999999999999764
No 90
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=22.34 E-value=50 Score=28.62 Aligned_cols=43 Identities=19% Similarity=0.201 Sum_probs=27.7
Q ss_pred ccEEEEecCCceEEEEEeCCCc--eEEeecc-ccCchhHH-hhhhhh
Q 025826 168 YPYLLVNIGSGVSMIKVDGDGK--FERISGT-SVGGGTFW-GLGRLL 210 (247)
Q Consensus 168 ~PyLlVNIGSGvSi~kv~~~~~--~~RVgGs-siGGGT~~-GL~~LL 210 (247)
...++|.||.||+=+-|-..+. ....+|+ .+||..|- -+...|
T Consensus 164 ~~~~vvDiGggttd~~v~~~g~~~v~~~~~~~~lGg~~~~~~I~~~l 210 (320)
T 2zgy_A 164 DSLLIIDLGGTTLDISQVMGKLSGISKIYGDSSLGVSLVTSAVKDAL 210 (320)
T ss_dssp CEEEEEEECSSCEEEEEEEGGGCCEEEEEEECSCCTHHHHHHHHHHT
T ss_pred CCEEEEEcCCCeEEEEEEeCCeeEEeeecCCccccHHHHHHHHHHHH
Confidence 3579999999998665544343 2334555 78888764 344444
No 91
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=21.41 E-value=59 Score=30.41 Aligned_cols=42 Identities=19% Similarity=0.300 Sum_probs=29.6
Q ss_pred eEEEEecCCc--ccchHHHHHHhCCccceehhhhhhhhhHHHHH
Q 025826 101 TLIKATGGGA--YKFADLIKEKLGVVLDKEDEMDCLVTGANFLL 142 (247)
Q Consensus 101 ~~i~~TGGga--~k~~~~~~~~lg~~~~k~dEm~cli~G~~fLl 142 (247)
..|.++||+| -.+..++.+.+|+++.+...-++-..|.-++.
T Consensus 405 ~~i~~~GG~a~s~~~~Qi~Adv~g~pV~~~~~~e~~alGaA~lA 448 (504)
T 2d4w_A 405 TELRVDGGMVANELLMQFQADQLGVDVVRPKVAETTALGAAYAA 448 (504)
T ss_dssp CEEEEESGGGGCHHHHHHHHHHHTSCEEEESCSCHHHHHHHHHH
T ss_pred ceEEEeCCcccCHHHHHHHHHHhCCeEEeCCCCcchHHHHHHHH
Confidence 5699999998 34566777888998877665555555555543
No 92
>1v8d_A Hypothetical protein (TT1679); X-RAY craytallography, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.16A {Thermus thermophilus} SCOP: c.140.1.1
Probab=21.22 E-value=30 Score=30.35 Aligned_cols=12 Identities=58% Similarity=0.908 Sum_probs=10.7
Q ss_pred eEEEEcCcceeE
Q 025826 23 HLALDIGGSLIK 34 (247)
Q Consensus 23 ~~giDIGGSL~K 34 (247)
+-|||||.||+=
T Consensus 168 ~AGIDIGdTlIG 179 (235)
T 1v8d_A 168 HGGMDIGGVLIG 179 (235)
T ss_dssp SEEEEESSCCCG
T ss_pred cCCcccccceee
Confidence 799999999974
No 93
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=21.05 E-value=52 Score=30.62 Aligned_cols=42 Identities=26% Similarity=0.395 Sum_probs=29.6
Q ss_pred eEEEEecCCc--ccchHHHHHHhCCccceehhhhhhhhhHHHHH
Q 025826 101 TLIKATGGGA--YKFADLIKEKLGVVLDKEDEMDCLVTGANFLL 142 (247)
Q Consensus 101 ~~i~~TGGga--~k~~~~~~~~lg~~~~k~dEm~cli~G~~fLl 142 (247)
..|.++||+| --+..++.+.+|+++...+.-++-..|.-.+.
T Consensus 400 ~~i~~~GG~a~n~~~~q~~Adv~g~pV~~~~~~e~~alGaA~la 443 (495)
T 2dpn_A 400 KVLKADGGMAQNRLFLKIQADLLGVPVAVPEVTETTALGAALMA 443 (495)
T ss_dssp CCEEEESGGGGCHHHHHHHHHHHTSCEEEESCSCHHHHHHHHHH
T ss_pred cEEEEecccccCHHHHHHHHHHhCCeeEecCCcccHHHHHHHHH
Confidence 4599999998 44667777889998877665555555555443
No 94
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=20.95 E-value=69 Score=30.09 Aligned_cols=42 Identities=33% Similarity=0.427 Sum_probs=27.8
Q ss_pred eEEEEecCCc--ccchHHHHHHhCCcc-ceehhhhhhhhhHHHHH
Q 025826 101 TLIKATGGGA--YKFADLIKEKLGVVL-DKEDEMDCLVTGANFLL 142 (247)
Q Consensus 101 ~~i~~TGGga--~k~~~~~~~~lg~~~-~k~dEm~cli~G~~fLl 142 (247)
..|.++||+| --+..++.+.+|++| .....-++-..|.-++.
T Consensus 404 ~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~~~~~e~~alGaA~lA 448 (511)
T 3hz6_A 404 GLLKVVGGGARSEAWLRMIADNLNVSLLVKPDAHLHPLRGLAALA 448 (511)
T ss_dssp CEEEEESGGGGCHHHHHHHHHHHTCEEEECCCGGGHHHHHHHHHH
T ss_pred CEEEEeCchhcCHHHHHHHHHHHCCeeEEecCCCCchHHHHHHHH
Confidence 5699999998 345666777899998 66444444444544443
No 95
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=20.59 E-value=99 Score=22.94 Aligned_cols=19 Identities=26% Similarity=0.149 Sum_probs=16.0
Q ss_pred CeEEEEcCcceeEEEEEee
Q 025826 22 SHLALDIGGSLIKVVYFLR 40 (247)
Q Consensus 22 ~~~giDIGGSL~KlvYf~~ 40 (247)
..+|+|.|-.-+=++...+
T Consensus 2 riLglD~G~kriGvAvsd~ 20 (98)
T 1iv0_A 2 RVGALDVGEARIGLAVGEE 20 (98)
T ss_dssp CEEEEEESSSEEEEEEECS
T ss_pred cEEEEEeCCCEEEEEEEeC
Confidence 4789999999999998553
Done!