Query 025827
Match_columns 247
No_of_seqs 151 out of 1060
Neff 6.5
Searched_HMMs 29240
Date Mon Mar 25 18:27:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025827.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025827hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1n10_A PHL P I, pollen allerge 100.0 6.6E-64 2.3E-68 441.2 25.1 211 21-245 15-241 (241)
2 2hcz_X Beta-expansin 1A; domai 100.0 4.3E-64 1.5E-68 443.5 23.1 213 21-247 15-244 (245)
3 3d30_A YOAJ, expansin like pro 100.0 1.9E-53 6.5E-58 367.7 24.1 192 23-247 4-206 (208)
4 1wc2_A Endoglucanase; hydrolas 100.0 2.1E-30 7.3E-35 216.1 8.8 125 21-156 11-163 (181)
5 3ft1_A PHL P 3 allergen; beta- 100.0 8.4E-29 2.9E-33 190.3 12.1 91 155-247 3-99 (100)
6 2jnz_A PHL P 3 allergen; timot 99.9 5.3E-27 1.8E-31 182.2 12.2 89 155-245 14-107 (108)
7 1bmw_A PHL P II, pollen allerg 99.9 8.3E-27 2.8E-31 178.0 -1.3 88 155-245 3-95 (96)
8 1bw3_A Barwin, basic barley SE 99.7 4.8E-17 1.6E-21 129.0 5.3 62 69-151 58-124 (125)
9 4avr_A PA4485; unknown functio 99.3 4E-11 1.4E-15 90.7 11.5 93 27-149 3-95 (95)
10 3sul_A Cerato-platanin-like pr 98.1 1.4E-05 4.8E-10 62.8 8.5 68 59-149 45-116 (122)
11 2kqa_A Cerato-platanin; elicit 98.0 1.6E-05 5.6E-10 62.8 8.0 67 59-149 51-120 (129)
12 3m3g_A EPL1 protein; fungal, p 98.0 2.7E-05 9.2E-10 61.0 8.1 66 59-149 45-114 (120)
13 3suj_A Cerato-platanin 1; doub 97.9 4.6E-05 1.6E-09 60.2 7.8 71 60-150 46-120 (127)
14 3suk_A Cerato-platanin-like pr 97.8 4.8E-05 1.6E-09 60.0 7.6 69 60-149 47-119 (125)
15 3sum_A Cerato-platanin-like pr 97.8 0.00011 3.8E-09 58.4 8.8 66 59-150 49-122 (136)
16 2eng_A Endoglucanase V; cellul 94.1 0.03 1E-06 47.5 3.1 53 60-127 72-124 (210)
17 3nrl_A Uncharacterized protein 59.9 7.1 0.00024 28.0 3.0 21 63-83 22-42 (81)
18 3pe9_A Fibronectin(III)-like m 34.0 94 0.0032 22.5 5.8 47 177-226 29-77 (98)
19 2a9d_A Sulfite oxidase; molybd 33.1 59 0.002 29.5 5.5 26 171-196 276-302 (372)
20 2blf_A SORA, sulfite\:cytochro 29.3 51 0.0017 29.9 4.3 53 171-224 286-347 (373)
21 1ogp_A Sulfite oxidase; oxidor 28.2 78 0.0027 28.9 5.4 26 171-196 289-315 (393)
22 1sox_A Sulfite oxidase; oxidor 27.9 78 0.0027 29.6 5.5 26 171-196 370-396 (466)
23 2kct_A Cytochrome C-type bioge 27.2 61 0.0021 23.6 3.7 28 213-240 30-61 (94)
24 2c9r_A COPC, copper resistance 23.9 43 0.0015 24.5 2.4 27 135-161 73-102 (102)
25 2kvz_A ISPE; structural genomi 23.4 78 0.0027 22.6 3.6 32 212-245 7-38 (85)
26 1lyq_A PCOC copper resistance 23.3 45 0.0015 24.5 2.4 27 135-161 75-104 (104)
27 4b2v_A S64; toxin, ICK; NMR {S 22.3 17 0.00058 20.8 -0.2 13 72-84 19-31 (32)
28 1sr3_A APO-CCME; OB fold, beta 22.1 78 0.0027 24.7 3.6 28 213-240 50-78 (136)
29 2kt7_A Putative peptidoglycan 21.7 1.1E+02 0.0038 22.6 4.2 30 211-245 5-34 (102)
No 1
>1n10_A PHL P I, pollen allergen PHL P 1; plant allergen, expansin, immunoglobulin-like fold, PSI beta barrel, structural genomics; HET: NAG; 2.90A {Phleum pratense} SCOP: b.7.3.1 b.52.1.3
Probab=100.00 E-value=6.6e-64 Score=441.25 Aligned_cols=211 Identities=32% Similarity=0.648 Sum_probs=189.0
Q ss_pred CCCCceEEEEEEeCCCCCCCC--CccccCCCcCCCCCCCCeEEEechhhcCCCCCCCceEEEEEcCCCCcccCCeEEEEE
Q 025827 21 KGAGWTNAHATFYGGGDASGT--MGGACGYGNLYSQGYGTNTAAVSTALFNNGLNCGACYAIKCVNDNRWCLPGSIIVTA 98 (247)
Q Consensus 21 ~~~~~~~g~aT~Yg~~~~~~~--~~GaCgy~~~~~~p~~~~~aA~s~~~~~~g~~CG~C~~V~c~~~p~~C~~gsv~V~V 98 (247)
+.++|.+|+||||+++++.++ .+|||||++++..|++.++||+|+.+|++|++||+||||+|.+.+ .|.+++|+|+|
T Consensus 15 ~~~~w~~g~AT~Yg~~~~~gt~~~gGACGyg~~~~~~~g~~~aAls~~lf~~G~~CG~CyeV~c~~~~-~C~~~~v~V~V 93 (241)
T 1n10_A 15 YGDKWLDAKSTWYGKPTGAGPKDNGGACGYKDVDKPPFSGMTGCGNTPIFKSGRGCGSCFEIKCTKPE-ACSGEPVVVHI 93 (241)
T ss_dssp CCCSCEEEEEEEEC----------CCTTCCCCTTSTTTTTCEEEECHHHHGGGTTSSCEEEEEECSST-TBCSCCEEEEE
T ss_pred ccCCceeeEEEEeCCCCCCCcCCCCeeCCCCCcCcCCCCcEEEEeCHHHccCcccCCCeEEEEeCCCC-ccCCCCEEEEE
Confidence 678999999999999887776 789999999887889999999999999999999999999998754 69989999999
Q ss_pred ecCCCCCCCCCCCCCCCCCCCCCceeeCHHHHHhhhc-------ccCCeEEEEEEEeeeccCC--ceEEEEc--CccceE
Q 025827 99 TNFCPPNFALSNTNGGWCNPPLHHFDLSQPVFLKIAQ-------YKAGIVPVQYRRVACKKSG--GIRFTIN--GHSYFN 167 (247)
Q Consensus 99 ~D~Cp~~~~~~~~~~~~C~~~~~~~DLS~~aF~~ia~-------~~~G~~~i~~~~V~C~~~g--ni~~~v~--ss~~w~ 167 (247)
||+|+ |.++..|||||+.||++||+ .+.|+++|+||+|+|+++| ||+|+|+ |++||+
T Consensus 94 tD~C~------------C~~~~~hfDLS~~AF~~iA~~g~~~~L~~~Gii~V~yrrV~C~~~gg~~i~f~v~~Gs~~~~~ 161 (241)
T 1n10_A 94 TDDNE------------EPIAPYHFDLSGHAFGAMAKKGDEQKLRSAGELELQFRRVKCKYPEGTKVTFHVEKGSNPNYL 161 (241)
T ss_dssp EEECS------------SCSSSSEEEEEHHHHHTTBSTTCHHHHHTTCSEEEEEEECCCCCCTTCCCEEEECTTCBTTEE
T ss_pred eEecC------------CCCCCcceecCHHHHHHhhccCcccccccCCEEEEEEEEEeCCCCCCCceEEEEcCCCCcceE
Confidence 99996 65467999999999999999 6899999999999999984 8999999 699999
Q ss_pred EEEEEeeCCCcceEEEEEEecC-CceeeccCCCCceEEeCCC--CCCcceEEEEEecCCcEEEEccccCCCCCCCeEEeC
Q 025827 168 LVLITNVGGAGDVVAVSIKGSK-TGWQALSRNWGQNWQSNSY--LNGQALSFKVTTSDGRTVISNNVAPANWNFGQTYTG 244 (247)
Q Consensus 168 av~v~n~~g~~~I~sVei~~~~-~~W~~m~r~~gn~W~~~~~--~~g~p~~vRvT~~~G~~v~~~~vip~~w~~g~~Y~~ 244 (247)
+|||+|++|.++|++|||++++ +.|++|+|+||++|+++.. +.+ ||+||||+.+||+|+++||||++|++|++|++
T Consensus 162 ~vlv~n~~g~g~V~~V~ik~~~~~~W~~m~r~wG~~W~~~~~~~l~g-pls~RvT~~~G~~v~~~nViP~~w~~g~ty~~ 240 (241)
T 1n10_A 162 ALLVKYVNGDGDVVAVDIKEKGKDKWIELKESWGAIWRIDTPDKLTG-PFTVRYTTEGGTKTEAEDVIPEGWKADTSYES 240 (241)
T ss_dssp EEEEECCCCSSCEEEEEEEETTCCCCEECBCCTTTCEEEECSSCCCS-CEEEEEEESSSCEEEEEEEECSSCCSSEEEEC
T ss_pred EEEEEecCCCCCEEEEEEEeCCCCCeEECccCcCcEEEeCCCCCCCC-CEEEEEEEeCCcEEEEccccCCCCCCCCEEeC
Confidence 9999999988999999999987 6899999999999998875 676 99999999999999999999999999999998
Q ss_pred C
Q 025827 245 R 245 (247)
Q Consensus 245 ~ 245 (247)
+
T Consensus 241 ~ 241 (241)
T 1n10_A 241 K 241 (241)
T ss_dssp -
T ss_pred C
Confidence 4
No 2
>2hcz_X Beta-expansin 1A; domain 1 is A beta barrel and domain 2 is A immunoglobulin L sandwich, allergen; HET: NAG MAN FCA; 2.75A {Zea mays}
Probab=100.00 E-value=4.3e-64 Score=443.53 Aligned_cols=213 Identities=33% Similarity=0.669 Sum_probs=197.3
Q ss_pred CCCCceEEEEEEeCCCCCCCC--CccccCCCcCCCCCCCCeEEEechhhcCCCCCCCceEEEEEcCCCCcccCCeEEEEE
Q 025827 21 KGAGWTNAHATFYGGGDASGT--MGGACGYGNLYSQGYGTNTAAVSTALFNNGLNCGACYAIKCVNDNRWCLPGSIIVTA 98 (247)
Q Consensus 21 ~~~~~~~g~aT~Yg~~~~~~~--~~GaCgy~~~~~~p~~~~~aA~s~~~~~~g~~CG~C~~V~c~~~p~~C~~gsv~V~V 98 (247)
+..+|.+|+||||+++++.++ .+|||||++++..|++.++||+++.+|++|++||+||||+|.+.+ .|.+++|+|+|
T Consensus 15 ~~~~w~~g~AT~Yg~~~~~gt~~~gGACGyg~~~~~p~~~~~aAls~~lf~~G~~CG~Cy~V~c~~~~-~C~~~sv~V~V 93 (245)
T 2hcz_X 15 YNGKWLTARATWYGQPNGAGAPDNGGACGIKNVNLPPYSGMTACGNVPIFKDGKGCGSCYEVRCKEKP-ECSGNPVTVYI 93 (245)
T ss_dssp CCCCCEEEEEEECSCTTSCSSTTSCCTTCCCCTTSTTTTTCEEEECHHHHGGGTSTTCEEEEECCSSS-SBCSSCEEEEE
T ss_pred cCCceeeeEEEEeCCCCCCCcCCCCccCCCCCCCcCCCCCEEEEeCHHHcCCchhcCCeEEEEeCCCC-ccCCCCEEEEE
Confidence 678899999999999887776 689999999877789999999999999999999999999998754 69888999999
Q ss_pred ecCCCCCCCCCCCCCCCCCCCCCceeeCHHHHHhhhc-------ccCCeEEEEEEEeeeccCC--ceEEEEc--CccceE
Q 025827 99 TNFCPPNFALSNTNGGWCNPPLHHFDLSQPVFLKIAQ-------YKAGIVPVQYRRVACKKSG--GIRFTIN--GHSYFN 167 (247)
Q Consensus 99 ~D~Cp~~~~~~~~~~~~C~~~~~~~DLS~~aF~~ia~-------~~~G~~~i~~~~V~C~~~g--ni~~~v~--ss~~w~ 167 (247)
||+||+ ..+.+|||||+.||++||+ ...|+++|+||||+|+++| ||+|+++ |++||+
T Consensus 94 tD~C~C------------~~~~~hfDLS~~AF~~iA~~g~~~~L~~~Gii~V~yrrV~C~~~gg~ni~f~v~~Gs~~~~~ 161 (245)
T 2hcz_X 94 TDMNYE------------PIAPYHFDLSGKAFGSLAKPGLNDKIRHCGIMDVEFRRVRCKYPAGQKIVFHIEKGCNPNYL 161 (245)
T ss_dssp EEECCC------------TTSSSEEEECHHHHHHTBCTTCHHHHTTTCCEEEEEEEECCCCSTTCCCEEEECCCCSSSCC
T ss_pred EeccCC------------CCCCccEEcCHHHHHHHhccccccccccCCEEEEEEEEEecCCCCCCcEEEEEcCCCCcceE
Confidence 999984 3357999999999999999 6899999999999999983 7999998 699999
Q ss_pred EEEEEeeCCCcceEEEEEEecC-CceeeccCCCCceEEeCCC--CCCcceEEEEEecCCcEEEEccccCCCCCCCeEEeC
Q 025827 168 LVLITNVGGAGDVVAVSIKGSK-TGWQALSRNWGQNWQSNSY--LNGQALSFKVTTSDGRTVISNNVAPANWNFGQTYTG 244 (247)
Q Consensus 168 av~v~n~~g~~~I~sVei~~~~-~~W~~m~r~~gn~W~~~~~--~~g~p~~vRvT~~~G~~v~~~~vip~~w~~g~~Y~~ 244 (247)
+|||+|++|.++|++|||++++ +.|++|+|+||++|+++.. +.+ ||+||||+.+||+|+++||||++|++|++|++
T Consensus 162 avlv~n~~g~g~V~~V~ik~~~~~~W~~m~r~~G~~W~~~~~~~l~g-pls~RvT~~~G~~v~~~nViP~~w~~g~ty~~ 240 (245)
T 2hcz_X 162 AVLVKYVADDGDIVLMEIQDKLSAEWKPMKLSWGAIWRMDTAKALKG-PFSIRLTSESGKKVIAKDVIPANWRPDAVYTS 240 (245)
T ss_dssp CEEEECCCTTCCEEEEEBCCSSSCSCBCCEEEETTEEECSCCSSCCS-SCCEEEEETTSCEEEESCSCCSSCCTTCEEEC
T ss_pred EEEEEecCCCCCEEEEEEEeCCCCceeECccCCCCEEEECCCCCCCC-CEEEEEEEeCCcEEEEeeeecCCCCCCCEEeC
Confidence 9999999999999999999987 4899999999999998875 676 99999999999999999999999999999999
Q ss_pred C-CC
Q 025827 245 R-QF 247 (247)
Q Consensus 245 ~-~~ 247 (247)
+ ||
T Consensus 241 ~~qf 244 (245)
T 2hcz_X 241 NVQF 244 (245)
T ss_dssp SCCC
T ss_pred cccc
Confidence 9 98
No 3
>3d30_A YOAJ, expansin like protein; peptidoglycan associated protei unknown function, MLTA, bacteria autolysis, peptidoglycan-B protein; 1.90A {Bacillus subtilis} PDB: 2bh0_A
Probab=100.00 E-value=1.9e-53 Score=367.74 Aligned_cols=192 Identities=22% Similarity=0.324 Sum_probs=173.2
Q ss_pred CCceEEEEEEeCCCCCCCCCccccCCCcCCCCCCCCeEEEechhhcCCC----CCCCceEEEEEcCCCCcccCCeEEEEE
Q 025827 23 AGWTNAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAAVSTALFNNG----LNCGACYAIKCVNDNRWCLPGSIIVTA 98 (247)
Q Consensus 23 ~~~~~g~aT~Yg~~~~~~~~~GaCgy~~~~~~p~~~~~aA~s~~~~~~g----~~CG~C~~V~c~~~p~~C~~gsv~V~V 98 (247)
++.++|+||||++.. .+||||+.. .|++.++||+++.+|++| ..||+||||+|. +++|+|+|
T Consensus 4 ~~~~~G~aT~Y~~g~----~~GACG~~~---~~~~~~~aAls~~~f~~G~~~~~~CG~c~~v~~~-------~gsv~V~v 69 (208)
T 3d30_A 4 DDLHEGYATYTGSGY----SGGAFLLDP---IPSDMEITAINPADLNYGGVKAALAGSYLEVEGP-------KGKTTVYV 69 (208)
T ss_dssp TCCEEEEEEECSTTS----SSCTTCCCC---CCTTCCEEEECHHHHTGGGCTTTTTTCEEEEEET-------TEEEEEEE
T ss_pred CCcEEEEEEEcCCCC----CCCcCCCCC---CCCCCEEEEeCHHHhCCCCcCccccCCEEEEEeC-------CCcEEEEE
Confidence 456789999999754 379999874 356789999999999987 799999999994 35899999
Q ss_pred ecCCCCCCCCCCCCCCCCCCCCCceeeCHHHHHhhhcccCCeEEEEEEEeeeccCCceEEEEc--CccceEEEEEEeeCC
Q 025827 99 TNFCPPNFALSNTNGGWCNPPLHHFDLSQPVFLKIAQYKAGIVPVQYRRVACKKSGGIRFTIN--GHSYFNLVLITNVGG 176 (247)
Q Consensus 99 ~D~Cp~~~~~~~~~~~~C~~~~~~~DLS~~aF~~ia~~~~G~~~i~~~~V~C~~~gni~~~v~--ss~~w~av~v~n~~g 176 (247)
+|+||. | +..|||||+.||++||.++.|+++|+||+|+|+++|+|+|+++ +++||++|||+|+++
T Consensus 70 ~D~CP~-----------C--~~~~~DLS~~aF~~la~~~~G~i~v~~~~V~C~~~G~i~f~v~~Gs~~~~~~v~v~n~~g 136 (208)
T 3d30_A 70 TDLYPE-----------G--ARGALDLSPNAFRKIGNMKDGKINIKWRVVKAPITGNFTYRIKEGSSRWWAAIQVRNHKY 136 (208)
T ss_dssp EEECTT-----------C--CTTCEEECHHHHHHHSCGGGSSEEEEEEEECCCCCSCCEEEECTTCSSSEEEEEEESCSS
T ss_pred EECCCC-----------C--CCCeEECCHHHHHHhcccCCCEEEEEEEEeCCCCCCceeEEEcCCCCCceEEEEEEecCC
Confidence 999998 8 4799999999999999999999999999999999999999999 799999999999985
Q ss_pred CcceEEEEEEecCCceeeccCCCCceEEeCCCCCCcceEEEEEecCCcEEEEccccCCCCCC----CeEEeCC-CC
Q 025827 177 AGDVVAVSIKGSKTGWQALSRNWGQNWQSNSYLNGQALSFKVTTSDGRTVISNNVAPANWNF----GQTYTGR-QF 247 (247)
Q Consensus 177 ~~~I~sVei~~~~~~W~~m~r~~gn~W~~~~~~~g~p~~vRvT~~~G~~v~~~~vip~~w~~----g~~Y~~~-~~ 247 (247)
+|++|||+++ ++|++|+|+|+|+|..+. +.+.||+||||+.+||+| .+|||++|++ |.+||++ ||
T Consensus 137 --~v~~v~i~~~-~~W~~m~r~~~n~~~~~~-~~~~pls~rvT~~~G~~v--~~vip~~w~~~~~~~~~~~~~~Qf 206 (208)
T 3d30_A 137 --PVMKMEYEKD-GKWINMEKMDYNHFVSTN-LGTGSLKVRMTDIRGKVV--KDTIPKLPESGTSKAYTVPGHVQF 206 (208)
T ss_dssp --CEEEEEEEET-TEEEEEEECTTSCEEEEC-CCSSSEEEEEEETTCCEE--EEEECCCCSSCCSSCEEEECCCCC
T ss_pred --CEEEEEEecC-CcEEEccccccceeecCC-CCCCCEEEEEEECCCCEE--EEEECCCCccCcccceEEeCcCcc
Confidence 8999999987 689999999999887654 444699999999999999 7999999997 8999999 98
No 4
>1wc2_A Endoglucanase; hydrolase, cellulase, cellulose, double-PSI fold, glycoside hydrolase; 1.2A {Mytilus edulis} SCOP: b.52.1.1
Probab=99.96 E-value=2.1e-30 Score=216.10 Aligned_cols=125 Identities=26% Similarity=0.439 Sum_probs=104.8
Q ss_pred CCCCceEEEEEEeCCCCCCCCCccccCCC-----cCCCCCCCCeEEEechhhcCCC------CCCCceEEEEEcCCC---
Q 025827 21 KGAGWTNAHATFYGGGDASGTMGGACGYG-----NLYSQGYGTNTAAVSTALFNNG------LNCGACYAIKCVNDN--- 86 (247)
Q Consensus 21 ~~~~~~~g~aT~Yg~~~~~~~~~GaCgy~-----~~~~~p~~~~~aA~s~~~~~~g------~~CG~C~~V~c~~~p--- 86 (247)
| .+|..++||||++.. +|||||+ ++++++++.++||+|+++|++| ++||+||||+|.+++
T Consensus 11 ~-~g~~~A~aT~Yg~~~-----gGACGyG~~~~~~l~~~gyg~~tAALStaLFn~G~~~w~G~~CG~Cyel~c~~~~c~~ 84 (181)
T 1wc2_A 11 Y-NGKSCASTTNYHDSH-----KGACGCGPASGDAQFGWNAGSFVAAASQMYFDSGNKGWCGQHCGQCIKLTTTGGYVPG 84 (181)
T ss_dssp E-TTEEEEEEEEECCCB-----CTTTTCSCSSSSBCCSSGGGSCEEEEEHHHHCTTCCSSSCTTTTCEEEEEEEEEECTT
T ss_pred c-CCccccceeEecCCC-----CcccCcCcCCCCCccccCCcceeeecCHHHhCCCccccccccCCCcEEEEcCCCCccc
Confidence 5 459999999999764 6999999 5555567889999999999997 899999999997653
Q ss_pred --CcccCC-eEEEEEecCCCCCCCCCCCCCCCCCCC-----------CCceeeCHHHHHhhhcccCCeEEEEEEEeeecc
Q 025827 87 --RWCLPG-SIIVTATNFCPPNFALSNTNGGWCNPP-----------LHHFDLSQPVFLKIAQYKAGIVPVQYRRVACKK 152 (247)
Q Consensus 87 --~~C~~g-sv~V~V~D~Cp~~~~~~~~~~~~C~~~-----------~~~~DLS~~aF~~ia~~~~G~~~i~~~~V~C~~ 152 (247)
..|.++ +|+|+|||+||.. ++|++||.++ +.||||+..| .+|+....|+++|+||+|+|+.
T Consensus 85 cg~~~~~g~SI~VtaTN~CPpn----~~nggWCn~pp~~~~~n~~G~~~HFDLs~pa-~~Ia~~~~GivpV~yrrV~C~~ 159 (181)
T 1wc2_A 85 QGGPVREGLSKTFMITNLCPNI----YPNQDWCNQGSQYGGHNKYGYELHLDLENGR-SQVTGMGWNNPETTWEVVNCDS 159 (181)
T ss_dssp SCCCCCTTCEEEEEEEEEECSS----TTSTTTSCCSSSSSCCCTTSCSEEEEEECTT-STTGGGTCSSEEEEEEEECHHH
T ss_pred ccccCCCCCeEEEEEecCCCCC----CCCCCccCCCcccCcccccCccccccccchH-HHhhhhcCCCceeEEEEEeCCC
Confidence 224445 8999999999953 4678999753 6899999999 8999999999999999999987
Q ss_pred CCce
Q 025827 153 SGGI 156 (247)
Q Consensus 153 ~gni 156 (247)
.+++
T Consensus 160 ~~~~ 163 (181)
T 1wc2_A 160 EHNH 163 (181)
T ss_dssp HHHH
T ss_pred CCCc
Confidence 4443
No 5
>3ft1_A PHL P 3 allergen; beta-barrel; 1.79A {Phleum pratense} SCOP: b.7.3.0 PDB: 3ft9_A
Probab=99.96 E-value=8.4e-29 Score=190.29 Aligned_cols=91 Identities=21% Similarity=0.439 Sum_probs=86.3
Q ss_pred ceEEEEc--CccceEEEEEEeeCCCcceEEEEEEecCC-ceeeccCCCCceEEeCC--CCCCcceEEEEEecCCcEEEEc
Q 025827 155 GIRFTIN--GHSYFNLVLITNVGGAGDVVAVSIKGSKT-GWQALSRNWGQNWQSNS--YLNGQALSFKVTTSDGRTVISN 229 (247)
Q Consensus 155 ni~~~v~--ss~~w~av~v~n~~g~~~I~sVei~~~~~-~W~~m~r~~gn~W~~~~--~~~g~p~~vRvT~~~G~~v~~~ 229 (247)
+|+|+|+ |++||++|+|.|++|.+||.+||||++++ .|++|+| ||++|++++ +|++ ||+||||+.+|+++++.
T Consensus 3 ~i~F~V~~gs~~~~l~vlv~nv~G~gdI~~V~ik~s~t~~W~~M~r-wGa~W~~~s~~~l~G-plSfRvt~~~G~~~v~~ 80 (100)
T 3ft1_A 3 QVTFTVQKGSDPKKLVLDIKYTRPGDSLAEVELRQHGSEEWEPLTK-KGNVWEVKSSKPLVG-PFNFRFMSKGGMRNVFD 80 (100)
T ss_dssp EEEEEECTTCBTTEEEEEEEEECTTCCEEEEEEECTTCCCCEECEE-ETTEEEEECSSCCCS-SEEEEEEETTCCEEEEE
T ss_pred CEEEEEecCCCcceEEEEEEEcCCCccEEEEEEEeCCCCCeEEecc-cCCEeEeCCCCCCCC-CEEEEEEEcCCcEEEEC
Confidence 7999998 69999999999999999999999999885 7999999 999999886 6887 99999999999999999
Q ss_pred cccCCCCCCCeEEeCC-CC
Q 025827 230 NVAPANWNFGQTYTGR-QF 247 (247)
Q Consensus 230 ~vip~~w~~g~~Y~~~-~~ 247 (247)
||||++|++|.||+++ ||
T Consensus 81 nViPa~W~~G~ty~s~vq~ 99 (100)
T 3ft1_A 81 EVIPTAFSIGKTYKPEEQE 99 (100)
T ss_dssp EEECTTCCTTCEECCCCBC
T ss_pred eEeCCCCCCCcEEeccccc
Confidence 9999999999999999 86
No 6
>2jnz_A PHL P 3 allergen; timothy grass pollen; NMR {Phleum pratense}
Probab=99.94 E-value=5.3e-27 Score=182.22 Aligned_cols=89 Identities=20% Similarity=0.470 Sum_probs=83.9
Q ss_pred ceEEEEc--CccceEEEEEEeeCCCcceEEEEEEe-cCCceeeccCCCCceEEeCC--CCCCcceEEEEEecCCcEEEEc
Q 025827 155 GIRFTIN--GHSYFNLVLITNVGGAGDVVAVSIKG-SKTGWQALSRNWGQNWQSNS--YLNGQALSFKVTTSDGRTVISN 229 (247)
Q Consensus 155 ni~~~v~--ss~~w~av~v~n~~g~~~I~sVei~~-~~~~W~~m~r~~gn~W~~~~--~~~g~p~~vRvT~~~G~~v~~~ 229 (247)
||.|+|+ |++||++|+|.|++|+++|++|||++ +.+.|++|+|+ |++|++++ +|.+ ||+||||+.+|+++++.
T Consensus 14 ~v~f~V~~~snp~~l~VlV~nv~G~GdI~~V~Ik~~~~~~W~~M~rn-Ga~W~~~s~~~L~G-plSfRvtts~G~~~va~ 91 (108)
T 2jnz_A 14 QVTFTVQKGSDPKKLVLDIKYTRPGDSLAEVELRQHGSEEWEPLTKK-GNVWEVKSSKPLVG-PFNFRFMSKGGMRNVFD 91 (108)
T ss_dssp EEEEEECTTCCSSEEEEEEEEEBTTBCEEEEEEECTTCCCCEECEEE-TTEEEEECSSCCCS-SEEEEEEETTTEEEEEE
T ss_pred cEEEEEecCCCccEEEEEEEEeCCCCCEEEEEEEeCCCCcEeEcccc-CCEeEeCCCCCCCC-CEEEEEEEcCCcEEEEC
Confidence 8999998 69999999999999999999999997 45789999999 99999986 6887 99999999999999999
Q ss_pred cccCCCCCCCeEEeCC
Q 025827 230 NVAPANWNFGQTYTGR 245 (247)
Q Consensus 230 ~vip~~w~~g~~Y~~~ 245 (247)
||||++|+||+||+++
T Consensus 92 nViPa~W~~Gqty~s~ 107 (108)
T 2jnz_A 92 EVIPTAFSIGKTYKPE 107 (108)
T ss_dssp EEECSSCCTTCEECCC
T ss_pred eEECCCCCCCCEEeCC
Confidence 9999999999999985
No 7
>1bmw_A PHL P II, pollen allergen PHL P2; allergy, immunoglobulins, immunology,; NMR {Phleum pratense} SCOP: b.7.3.1 PDB: 1who_A 1whp_A 2vxq_A
Probab=99.91 E-value=8.3e-27 Score=178.05 Aligned_cols=88 Identities=24% Similarity=0.514 Sum_probs=81.6
Q ss_pred ceEEEEc--CccceEEEEEEeeCCCcceEEEEEEec-CCceeeccCCCCceEEeCC--CCCCcceEEEEEecCCcEEEEc
Q 025827 155 GIRFTIN--GHSYFNLVLITNVGGAGDVVAVSIKGS-KTGWQALSRNWGQNWQSNS--YLNGQALSFKVTTSDGRTVISN 229 (247)
Q Consensus 155 ni~~~v~--ss~~w~av~v~n~~g~~~I~sVei~~~-~~~W~~m~r~~gn~W~~~~--~~~g~p~~vRvT~~~G~~v~~~ 229 (247)
+|+|+|+ |++||++|+|.|++ ++|++|||+++ .+.|++|+|+||++|++++ +|+| ||+||||+.+|+++++.
T Consensus 3 ~i~F~V~~gs~~~~l~vlv~nv~--gdI~~V~ik~~~~~~W~~M~r~wGa~W~~~~~~~L~G-plSfRvt~~~G~~~v~~ 79 (96)
T 1bmw_A 3 KVTFTVEKGSNEKHLAVLVKYEG--DTMAEVELREHGSDEWVAMTKGEGGVWTFDSEEPLQG-PFNFRFLTEKGMKNVFD 79 (96)
T ss_dssp CCCCCCCTTCSSSBCCBCCCCSS--SCCCCCEECCSSSSSCEECBCCSSSSBBCBCCSSCCC-CCCBCCEETTTEECCBS
T ss_pred CEEEEEecCCCCceEEEEEEEeC--CCEEEEEEEECCCCcEEECccCcCceeEeCCCCCCCC-CEEEEEEEcCCcEEEEe
Confidence 7899998 79999999999998 68999999995 5789999999999999987 5777 99999999999999999
Q ss_pred cccCCCCCCCeEEeCC
Q 025827 230 NVAPANWNFGQTYTGR 245 (247)
Q Consensus 230 ~vip~~w~~g~~Y~~~ 245 (247)
||||++|+||++|+++
T Consensus 80 nViP~~W~~G~ty~~~ 95 (96)
T 1bmw_A 80 DVVPEKYTIGATYAPE 95 (96)
T ss_dssp SCSCSSCCSSSCCCC-
T ss_pred eEeCCCCCCCCEEeCC
Confidence 9999999999999985
No 8
>1bw3_A Barwin, basic barley SEED protein; lectin; NMR {Hordeum vulgare} SCOP: b.52.1.2 PDB: 1bw4_A
Probab=99.66 E-value=4.8e-17 Score=128.96 Aligned_cols=62 Identities=27% Similarity=0.565 Sum_probs=55.2
Q ss_pred CCCCCCCceEEEEEcCCCCcccCCeEEEEEecCCCCCCCCCCCCCCCCCCCCCceeeC-HHHHHhhhc----ccCCeEEE
Q 025827 69 NNGLNCGACYAIKCVNDNRWCLPGSIIVTATNFCPPNFALSNTNGGWCNPPLHHFDLS-QPVFLKIAQ----YKAGIVPV 143 (247)
Q Consensus 69 ~~g~~CG~C~~V~c~~~p~~C~~gsv~V~V~D~Cp~~~~~~~~~~~~C~~~~~~~DLS-~~aF~~ia~----~~~G~~~i 143 (247)
+++..||+|++|++... +++|+|+|+|+||. | +|||| ++||++|+. .+.|+++|
T Consensus 58 ~~g~~CG~cv~Vtn~~n-----GksV~V~VvD~CP~-----------g-----gLDLS~~~AF~~Ia~~g~G~~~G~i~V 116 (125)
T 1bw3_A 58 RGQAACGKCLRVTNPAT-----GAQITARIVDQCAN-----------G-----GLDLDWDTVFTKIDTNGIGYQQGHLNV 116 (125)
T ss_dssp CSGGGTTCEEEEEETTT-----TEEEEEEEEECCSS-----------S-----SCCSCSSSSHHHHCSSCHHHHHSEEEE
T ss_pred CCCcccCCEEEeEeCCC-----CCEEEEEEEEeCCC-----------C-----CCCCCCHHHHHHHhccCCcccCcEEEE
Confidence 67789999999999642 24999999999997 4 39999 999999998 78999999
Q ss_pred EEEEeeec
Q 025827 144 QYRRVACK 151 (247)
Q Consensus 144 ~~~~V~C~ 151 (247)
+|++|+|+
T Consensus 117 ~w~~V~C~ 124 (125)
T 1bw3_A 117 NYQFVDCR 124 (125)
T ss_dssp EEEEECCC
T ss_pred EEEEEeCC
Confidence 99999996
No 9
>4avr_A PA4485; unknown function, GRAM-negative bacteria, infectious disease structure-based inhibitor design; 1.08A {Pseudomonas aeruginosa PA01}
Probab=99.28 E-value=4e-11 Score=90.70 Aligned_cols=93 Identities=23% Similarity=0.299 Sum_probs=72.9
Q ss_pred EEEEEEeCCCCCCCCCccccCCCcCCCCCCCCeEEEechhhcCCCCCCCceEEEEEcCCCCcccCCeEEEEEecCCCCCC
Q 025827 27 NAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAAVSTALFNNGLNCGACYAIKCVNDNRWCLPGSIIVTATNFCPPNF 106 (247)
Q Consensus 27 ~g~aT~Yg~~~~~~~~~GaCgy~~~~~~p~~~~~aA~s~~~~~~g~~CG~C~~V~c~~~p~~C~~gsv~V~V~D~Cp~~~ 106 (247)
.|.|+||+..... ...|||-... ...++||-.. ..||..++|+...+ +.+|+|+|.|.||.
T Consensus 3 ~G~ASwYg~~f~G--~~TA~Ge~~~----~~~~tAAH~t------lP~gt~vrVtNl~n-----GksVvVrVnDRGP~-- 63 (95)
T 4avr_A 3 TGEASYYGSRHAG--LRTASGERYN----PNAMTAAHRT------LPFGARVRVTNLDN-----RRSVVVRINDRGPF-- 63 (95)
T ss_dssp EEEEEECCGGGTT--SBCTTSCBCC----TTSCEEECSS------SCTTCEEEEEETTT-----CCEEEEEEEECCCC--
T ss_pred EEEEEEECCccCC--CCCCCccCcC----CCCCEEEcCC------CCCCcEEEEEECCC-----CcEEEEEEccCCCC--
Confidence 6999999853110 2578874421 2357888764 57999999999764 34999999999997
Q ss_pred CCCCCCCCCCCCCCCceeeCHHHHHhhhcccCCeEEEEEEEee
Q 025827 107 ALSNTNGGWCNPPLHHFDLSQPVFLKIAQYKAGIVPVQYRRVA 149 (247)
Q Consensus 107 ~~~~~~~~~C~~~~~~~DLS~~aF~~ia~~~~G~~~i~~~~V~ 149 (247)
|. ...+|||+.||++|+..+.|+.+|+|+.++
T Consensus 64 ---------~~--griIDLS~aAa~~Lg~~~~G~~~V~ve~~~ 95 (95)
T 4avr_A 64 ---------RR--GRIIDVSRKAAEGLGMIRSGVAPVRIESLD 95 (95)
T ss_dssp ---------ST--TEEEEECHHHHHHHTCTTTSCEEEEEEEC-
T ss_pred ---------CC--CCEEEeCHHHHHHhCCcCCCEEEEEEEEeC
Confidence 64 478999999999999999999999999863
No 10
>3sul_A Cerato-platanin-like protein; double PSI beta barrel, unknown function; 1.63A {Moniliophthora perniciosa}
Probab=98.08 E-value=1.4e-05 Score=62.81 Aligned_cols=68 Identities=24% Similarity=0.366 Sum_probs=53.0
Q ss_pred eEEEech-hhcCCCCCCCceEEEEEcCCCCcccCCeEEEEEecCCCCCCCCCCCCCCCCCCCCCceeeCHHHHHhhhcc-
Q 025827 59 NTAAVST-ALFNNGLNCGACYAIKCVNDNRWCLPGSIIVTATNFCPPNFALSNTNGGWCNPPLHHFDLSQPVFLKIAQY- 136 (247)
Q Consensus 59 ~~aA~s~-~~~~~g~~CG~C~~V~c~~~p~~C~~gsv~V~V~D~Cp~~~~~~~~~~~~C~~~~~~~DLS~~aF~~ia~~- 136 (247)
+|.+... .-|++ ..||.|+|++.... ..+|.|..+|.=+ ..|+|+.+||+.|.+.
T Consensus 45 FIGg~~~V~gwnS-~~CGtC~~lty~~~-----g~si~vlaID~a~-----------------~Gfnis~~Amn~LT~G~ 101 (122)
T 3sul_A 45 YVGAVDTITGWNS-ESCGTCYQITWSGT-----GKTIHVVGVDVAG-----------------NGFNVGQRAMDDLTNGQ 101 (122)
T ss_dssp EEEEETTCCSTTC-TTTTCEEEEEETTT-----TEEEEEEEEEECS-----------------SSEEECHHHHHHHHTSC
T ss_pred ccccccccccCCC-CCCCceEEEEEcCC-----CcEEEEEEEecCC-----------------CceeehHHHHHHhcCCc
Confidence 4655544 34655 99999999999521 2499999999743 3599999999999853
Q ss_pred --cCCeEEEEEEEee
Q 025827 137 --KAGIVPVQYRRVA 149 (247)
Q Consensus 137 --~~G~~~i~~~~V~ 149 (247)
..|+|++++++|+
T Consensus 102 a~~lG~V~a~~~qV~ 116 (122)
T 3sul_A 102 AVALGNIDVTATLVD 116 (122)
T ss_dssp HHHHSEEEEEEEEEC
T ss_pred ceecceEeEEEEEcC
Confidence 3599999999997
No 11
>2kqa_A Cerato-platanin; elicitor, secreted, toxin; NMR {Ceratocystis platani}
Probab=98.03 E-value=1.6e-05 Score=62.78 Aligned_cols=67 Identities=25% Similarity=0.487 Sum_probs=53.9
Q ss_pred eEEEech-hhcCCCCCCCceEEEEEcCCCCcccCCeEEEEEecCCCCCCCCCCCCCCCCCCCCCceeeCHHHHHhhhc-c
Q 025827 59 NTAAVST-ALFNNGLNCGACYAIKCVNDNRWCLPGSIIVTATNFCPPNFALSNTNGGWCNPPLHHFDLSQPVFLKIAQ-Y 136 (247)
Q Consensus 59 ~~aA~s~-~~~~~g~~CG~C~~V~c~~~p~~C~~gsv~V~V~D~Cp~~~~~~~~~~~~C~~~~~~~DLS~~aF~~ia~-~ 136 (247)
.|.+... .-|+ ...||.|++|+..+ +.+|.|+.+|.=+ ..|+++.+||+.|.+ .
T Consensus 51 ~IGga~~iagWN-S~~CGtC~~lty~n------g~sI~vlaID~A~-----------------~gFnIs~~Amn~LT~G~ 106 (129)
T 2kqa_A 51 NVGGIPDIAGWD-SPSCGTCWKVTIPN------GNSIFIRGVDSGR-----------------GGFNVNPTAFTKLVGST 106 (129)
T ss_dssp SEEEETTCCSTT-CTTCSCEEEEEETT------TEEEEEEEEEECS-----------------SSEEECHHHHHHHHSSS
T ss_pred eeccchhhccCC-CCCCCceEEEEEcC------CCEEEEEEEccCC-----------------CceeehHHHHHHhcCCc
Confidence 3555544 3466 78999999999942 2499999999743 459999999999987 5
Q ss_pred cCCeE-EEEEEEee
Q 025827 137 KAGIV-PVQYRRVA 149 (247)
Q Consensus 137 ~~G~~-~i~~~~V~ 149 (247)
..|+| +++|++|+
T Consensus 107 ~lG~V~~a~~~qV~ 120 (129)
T 2kqa_A 107 EAGRVDNVNYVQVD 120 (129)
T ss_dssp SSCCBCSCEEEECC
T ss_pred ccCcEeEEEEEEcC
Confidence 78999 99999997
No 12
>3m3g_A EPL1 protein; fungal, plant defense, fungus, polysaccharide-binding protei; 1.39A {Hypocrea virens}
Probab=97.96 E-value=2.7e-05 Score=61.02 Aligned_cols=66 Identities=18% Similarity=0.361 Sum_probs=51.5
Q ss_pred eEEEech-hhcCCCCCCCceEEEEEcCCCCcccCCeEEEEEecCCCCCCCCCCCCCCCCCCCCCceeeCHHHHHhhhcc-
Q 025827 59 NTAAVST-ALFNNGLNCGACYAIKCVNDNRWCLPGSIIVTATNFCPPNFALSNTNGGWCNPPLHHFDLSQPVFLKIAQY- 136 (247)
Q Consensus 59 ~~aA~s~-~~~~~g~~CG~C~~V~c~~~p~~C~~gsv~V~V~D~Cp~~~~~~~~~~~~C~~~~~~~DLS~~aF~~ia~~- 136 (247)
.|.+... .-|+ ...||.|+|++..+ .+|.|..+|.=+ ..|+|+.+||+.|.+.
T Consensus 45 ~IGg~~~i~gwn-s~~CGtC~~lty~g-------~si~vlaID~a~-----------------~Gfnis~~A~n~LT~G~ 99 (120)
T 3m3g_A 45 YIGGAAAVAGWN-SASCGTCWKLQYSG-------HTIYVLAVDHAA-----------------SGFNIALDAMNALTGGQ 99 (120)
T ss_dssp SEEEETTCCSTT-CTTTTCEEEEEETT-------EEEEEEEEEECS-----------------SSEEECHHHHHHHHTSC
T ss_pred ccccccccccCC-CCCCCceEEEEECC-------eEEEEEEEecCC-----------------CceeecHHHHHHhhCCc
Confidence 3555443 3355 57999999999942 499999999743 4599999999999863
Q ss_pred --cCCeEEEEEEEee
Q 025827 137 --KAGIVPVQYRRVA 149 (247)
Q Consensus 137 --~~G~~~i~~~~V~ 149 (247)
..|+|++++++|+
T Consensus 100 a~~lG~V~a~~~~V~ 114 (120)
T 3m3g_A 100 AVQLGRVSATATQVP 114 (120)
T ss_dssp HHHHCEEECEEEEEC
T ss_pred ceeeeeEeEEEEEcC
Confidence 3599999999997
No 13
>3suj_A Cerato-platanin 1; double PSI beta barrel, unknown function; 1.34A {Moniliophthora perniciosa}
Probab=97.85 E-value=4.6e-05 Score=60.22 Aligned_cols=71 Identities=27% Similarity=0.446 Sum_probs=52.6
Q ss_pred EEEech-hhcCCCCCCCceEEEEEcCCCCcccCCeEEEEEecCCCCCCCCCCCCCCCCCCCCCceeeCHHHHHhhhcc--
Q 025827 60 TAAVST-ALFNNGLNCGACYAIKCVNDNRWCLPGSIIVTATNFCPPNFALSNTNGGWCNPPLHHFDLSQPVFLKIAQY-- 136 (247)
Q Consensus 60 ~aA~s~-~~~~~g~~CG~C~~V~c~~~p~~C~~gsv~V~V~D~Cp~~~~~~~~~~~~C~~~~~~~DLS~~aF~~ia~~-- 136 (247)
|.+... .-|+ ...||.|+|++..+.. -...+|.|..+|.=+ ..|+|+.+||+.|.+.
T Consensus 46 IGg~~~i~gwn-s~~CGtC~~lty~g~~--~~~~si~vlaID~a~-----------------~Gfnis~~Amn~LT~g~a 105 (127)
T 3suj_A 46 IGGSSDIAGYN-SPNCGSCYQLTYSSAH--TTPKSIYMVAIDRSA-----------------EGFTASKQAMDDLTNKRA 105 (127)
T ss_dssp EEEETTCCSTT-CTTTTCEEEEEECCSS--SCCEEEEEEEEEECS-----------------SSEEECHHHHHHHHTSCH
T ss_pred eccccccccCC-CCCCCceEEEEECCCC--CcceEEEEEEEecCC-----------------CceeecHHHHHHhcCCcc
Confidence 544432 3355 4799999999997410 012499999999743 3499999999999853
Q ss_pred -cCCeEEEEEEEeee
Q 025827 137 -KAGIVPVQYRRVAC 150 (247)
Q Consensus 137 -~~G~~~i~~~~V~C 150 (247)
..|+|+++|++|+=
T Consensus 106 ~~lG~V~~~~~~V~~ 120 (127)
T 3suj_A 106 EELGTVNVDVRKVDF 120 (127)
T ss_dssp HHHSSEEEEEEEECG
T ss_pred ccceeEEEEEEEeCH
Confidence 36999999999973
No 14
>3suk_A Cerato-platanin-like protein; double PSI beta barrel, unknown function; 1.34A {Moniliophthora perniciosa}
Probab=97.84 E-value=4.8e-05 Score=60.03 Aligned_cols=69 Identities=28% Similarity=0.428 Sum_probs=52.1
Q ss_pred EEEech-hhcCCCCCCCceEEEEEcCCCCcccCCeEEEEEecCCCCCCCCCCCCCCCCCCCCCceeeCHHHHHhhhcc--
Q 025827 60 TAAVST-ALFNNGLNCGACYAIKCVNDNRWCLPGSIIVTATNFCPPNFALSNTNGGWCNPPLHHFDLSQPVFLKIAQY-- 136 (247)
Q Consensus 60 ~aA~s~-~~~~~g~~CG~C~~V~c~~~p~~C~~gsv~V~V~D~Cp~~~~~~~~~~~~C~~~~~~~DLS~~aF~~ia~~-- 136 (247)
|.+... .-|+ ...||.|+|++..+ |. ...+|.|..+|.=+ ..|+|+.+||+.|.+.
T Consensus 47 IGg~~~i~gwn-S~~CGtC~~lty~g-~~--~~~si~vlaID~a~-----------------~Gfnis~~Amn~LT~G~a 105 (125)
T 3suk_A 47 IGASSDIGGFN-SPACGNCYTISFTF-QG--VTRSINLVAIDHAG-----------------NGFNVAQAAMDELTNGNA 105 (125)
T ss_dssp EEEETTCCSTT-CTTTTCEEEEEEEE-TT--EEEEEEEEEEEECS-----------------SSEEECHHHHHHHHTSCH
T ss_pred eccccccccCC-CCCCCeeEEEEEcC-CC--cceEEEEEEEecCC-----------------CceeecHHHHHHhcCCcc
Confidence 555443 3455 47999999999964 10 01399999999743 4599999999999863
Q ss_pred -cCCeEEEEEEEee
Q 025827 137 -KAGIVPVQYRRVA 149 (247)
Q Consensus 137 -~~G~~~i~~~~V~ 149 (247)
..|+|++++++|+
T Consensus 106 ~~lG~V~~~~~~V~ 119 (125)
T 3suk_A 106 VALGTIDVQSQQVA 119 (125)
T ss_dssp HHHCEEEEEEEEEC
T ss_pred cccceEeEEEEEcC
Confidence 3599999999997
No 15
>3sum_A Cerato-platanin-like protein; double PSI beta barrel, unknown function; 1.87A {Moniliophthora perniciosa}
Probab=97.77 E-value=0.00011 Score=58.41 Aligned_cols=66 Identities=14% Similarity=0.249 Sum_probs=51.1
Q ss_pred eEEEechhhcCCCCCCCceEEEEEcCCCCcccCCeEEEEEecCCCCCCCCCCCCCCCCCCCCCceeeCHHHHHhhhcc--
Q 025827 59 NTAAVSTALFNNGLNCGACYAIKCVNDNRWCLPGSIIVTATNFCPPNFALSNTNGGWCNPPLHHFDLSQPVFLKIAQY-- 136 (247)
Q Consensus 59 ~~aA~s~~~~~~g~~CG~C~~V~c~~~p~~C~~gsv~V~V~D~Cp~~~~~~~~~~~~C~~~~~~~DLS~~aF~~ia~~-- 136 (247)
.|.+.. |+ ...||.|++|+..+ .+|.|..+|.=.+ ..-||||.+||+.|...
T Consensus 49 ~igg~~---wn-s~~CGtCwkLtY~G-------~sI~vlaID~a~~---------------g~~FnIs~~Amn~LT~G~~ 102 (136)
T 3sum_A 49 HFVAAP---EA-QTECGSCWKLRYKG-------NHAFVTVVDRVEE---------------ANLFVGGTDLVKNLTTFNG 102 (136)
T ss_dssp SEEECC---BT-TBCTTCEEEEEETT-------EEEEEEEEECCCS---------------TTEEEECHHHHHHHTCBTT
T ss_pred cccccc---cC-CCCCCceEEEEECC-------eEEEEEEEecCCC---------------cceEeehHHHHHHHhCCCc
Confidence 355554 54 58999999999942 3999999997432 12399999999999853
Q ss_pred -----cCCeEEE-EEEEeee
Q 025827 137 -----KAGIVPV-QYRRVAC 150 (247)
Q Consensus 137 -----~~G~~~i-~~~~V~C 150 (247)
..|+|++ +|++|+=
T Consensus 103 a~~a~elG~Vda~~~~qVd~ 122 (136)
T 3sum_A 103 APEGYDWGTAQLFSAYQVDG 122 (136)
T ss_dssp BCHHHHHSEEECSEEEEECG
T ss_pred cccceecceeeeeEEEEcCH
Confidence 3599999 9999973
No 16
>2eng_A Endoglucanase V; cellulose degradation, hydrolase (endoglucanase), glycosidase; 1.50A {Humicola insolens} SCOP: b.52.1.1 PDB: 3eng_A* 4eng_A* 1hd5_A 1oa7_A* 1oa9_A 1l8f_A
Probab=94.08 E-value=0.03 Score=47.47 Aligned_cols=53 Identities=28% Similarity=0.306 Sum_probs=34.3
Q ss_pred EEEechhhcCCCCCCCceEEEEEcCCCCcccCCeEEEEEecCCCCCCCCCCCCCCCCCCCCCceeeCH
Q 025827 60 TAAVSTALFNNGLNCGACYAIKCVNDNRWCLPGSIIVTATNFCPPNFALSNTNGGWCNPPLHHFDLSQ 127 (247)
Q Consensus 60 ~aA~s~~~~~~g~~CG~C~~V~c~~~p~~C~~gsv~V~V~D~Cp~~~~~~~~~~~~C~~~~~~~DLS~ 127 (247)
+||++-.--.....|++||+++=.+.+ ...++.+|+||+...+- ..+||||..
T Consensus 72 FaA~~~~g~~e~~~Cc~C~~LtFt~~~--~~GKkmiVQ~TNtG~Dl-------------~~n~FDl~i 124 (210)
T 2eng_A 72 FAATSIAGSNEAGWCCACYELTFTSGP--VAGKKMVVQSTSTGGDL-------------GSNHFDLNI 124 (210)
T ss_dssp EEEEECTTCCHHHHTTCEEEEEECSGG--GTTCEEEEEEEEC------------------CCEEEEEC
T ss_pred eeeeeccCCccccccceeEEEEEcCCC--cCCCEEEEEEecccCCC-------------CCCceeEec
Confidence 566652211123579999999998753 34569999999987651 368999964
No 17
>3nrl_A Uncharacterized protein rumgna_01417; beta protein, structural genomics, PSI-2, protein structure initiative; 1.90A {Ruminococcus gnavus}
Probab=59.94 E-value=7.1 Score=28.00 Aligned_cols=21 Identities=33% Similarity=0.857 Sum_probs=16.5
Q ss_pred echhhcCCCCCCCceEEEEEc
Q 025827 63 VSTALFNNGLNCGACYAIKCV 83 (247)
Q Consensus 63 ~s~~~~~~g~~CG~C~~V~c~ 83 (247)
.+...|.+|..||.|++|.-.
T Consensus 22 ~~~~~~ygGlHCGE~feV~v~ 42 (81)
T 3nrl_A 22 FDLESFYGGLHCGECFDVKVK 42 (81)
T ss_dssp EETTEECCCCCTTCEEEEEET
T ss_pred eccccccCCcccccEEEEEEC
Confidence 334557789999999999863
No 18
>3pe9_A Fibronectin(III)-like module; CBHA, beta-sandwich, cellulosome, unknown function; 1.69A {Clostridium thermocellum}
Probab=34.02 E-value=94 Score=22.53 Aligned_cols=47 Identities=13% Similarity=0.197 Sum_probs=29.1
Q ss_pred CcceEEEEEEecCCc-eeeccCCCCceEEeCCCCCC-cceEEEEEecCCcEE
Q 025827 177 AGDVVAVSIKGSKTG-WQALSRNWGQNWQSNSYLNG-QALSFKVTTSDGRTV 226 (247)
Q Consensus 177 ~~~I~sVei~~~~~~-W~~m~r~~gn~W~~~~~~~g-~p~~vRvT~~~G~~v 226 (247)
++.|.+||+.-.+.. .....+.|.-.|... .| -.+..|.||..|.+-
T Consensus 29 dg~V~kVef~vdg~~vg~dt~apy~~~w~~~---~G~htl~a~AtD~~G~~~ 77 (98)
T 3pe9_A 29 DGKISRVDFLVDGEVIGSDREAPYEYEWKAV---EGNHEISVIAYDDDDAAS 77 (98)
T ss_dssp SSCEEEEEEEETTEEEEEECSSSEEEEEECC---SEEEEEEEEEEETTCCBC
T ss_pred CCCEEEEEEEECCEEecccccCCEEEEEEcC---CccEEEEEEEEECCCCEE
Confidence 356999999977632 234445555567643 23 256677789888654
No 19
>2a9d_A Sulfite oxidase; molybdopterin, molybdenum, oxidoreductase; HET: MTE; 1.70A {Gallus gallus} SCOP: b.1.18.6 d.176.1.1 PDB: 2a9a_A* 2a99_A* 2a9b_A* 2a9c_A*
Probab=33.11 E-value=59 Score=29.49 Aligned_cols=26 Identities=23% Similarity=0.401 Sum_probs=18.3
Q ss_pred EEeeCCCcceEEEEEEecCC-ceeecc
Q 025827 171 ITNVGGAGDVVAVSIKGSKT-GWQALS 196 (247)
Q Consensus 171 v~n~~g~~~I~sVei~~~~~-~W~~m~ 196 (247)
+.+.+|...|+.|||...++ +|+...
T Consensus 276 ~A~sGgg~~I~rVEVS~DgG~tW~~A~ 302 (372)
T 2a9d_A 276 YAWSGGGREVVRVDVSLDGGRTWKVAR 302 (372)
T ss_dssp EEECSTTCCEEEEEEESBSSSSCEECE
T ss_pred EEEcCCCCCEEEEEEEcCCCCcceEeE
Confidence 34544434799999998764 898555
No 20
>2blf_A SORA, sulfite\:cytochrome C oxidoreductase subunit A; sulfite oxidase, molybdopterin, C-type cytochrome, heme, electron transport; HET: MSS HEC; 1.8A {Starkeya novella} PDB: 2bpb_A* 2c9x_A* 2ca3_A* 2ca4_A*
Probab=29.29 E-value=51 Score=29.92 Aligned_cols=53 Identities=21% Similarity=0.445 Sum_probs=30.7
Q ss_pred EEeeCCCcceEEEEEEecCC-ceeeccCC--CC----ceEEeCCC-CCC-cceEEEEEecCCc
Q 025827 171 ITNVGGAGDVVAVSIKGSKT-GWQALSRN--WG----QNWQSNSY-LNG-QALSFKVTTSDGR 224 (247)
Q Consensus 171 v~n~~g~~~I~sVei~~~~~-~W~~m~r~--~g----n~W~~~~~-~~g-~p~~vRvT~~~G~ 224 (247)
+.+ +|...|+.|||...++ +|+...-. .+ -.|++.-+ ..+ --+.+|-||.+|.
T Consensus 286 ~A~-~Gg~~I~rVEVS~DgG~tW~~A~l~~~~~~~~W~~W~~~~~~~~g~~~i~~RA~D~~g~ 347 (373)
T 2blf_A 286 IAF-DGGYGITQVSVSADAGKSWTNATLDPGLGKYSFRGWKAVLPLTKGDHVLMCRATNARGE 347 (373)
T ss_dssp EEE-CSSSCEEEEEEESSTTSSCEECEECCCSCTTSCEEEEEEEEECSEEEEEEEEEEETTSC
T ss_pred EEE-cCCCCEEEEEEEeCCCCCceEeEeCCCCCCCeEEEEEEEEEcCCCcEEEEEEEEcCCCC
Confidence 344 3456899999998764 89855432 11 24554322 222 1355677887774
No 21
>1ogp_A Sulfite oxidase; oxidoreductase, molybdenum cofactor, molybdopterin, peroxisomes, intramolecular electron transfer, oxidoreductas; HET: MTQ; 2.60A {Arabidopsis thaliana} SCOP: b.1.18.6 d.176.1.1
Probab=28.25 E-value=78 Score=28.90 Aligned_cols=26 Identities=23% Similarity=0.336 Sum_probs=19.1
Q ss_pred EEeeCCCcceEEEEEEecCC-ceeecc
Q 025827 171 ITNVGGAGDVVAVSIKGSKT-GWQALS 196 (247)
Q Consensus 171 v~n~~g~~~I~sVei~~~~~-~W~~m~ 196 (247)
..+.+|...|+.|||...++ +|+...
T Consensus 289 ~A~sGgg~~I~rVEVS~DgG~tW~~A~ 315 (393)
T 1ogp_A 289 YAVSGGGRGIERVDISLDGGKNWVEAS 315 (393)
T ss_dssp EEECSTTCCEEEEEEESSTTSSCEECE
T ss_pred EEEcCCCCCEEEEEEEcCCCCCceEee
Confidence 45556456899999998764 898554
No 22
>1sox_A Sulfite oxidase; oxidoreductase, sulfite oxidation; HET: MTE HEM EPE; 1.90A {Gallus gallus} SCOP: b.1.18.6 d.120.1.1 d.176.1.1 PDB: 3hc2_A* 3hbq_A* 3hbg_A* 3hbp_A* 3r18_A* 3r19_A*
Probab=27.90 E-value=78 Score=29.57 Aligned_cols=26 Identities=23% Similarity=0.401 Sum_probs=18.3
Q ss_pred EEeeCCCcceEEEEEEecCC-ceeecc
Q 025827 171 ITNVGGAGDVVAVSIKGSKT-GWQALS 196 (247)
Q Consensus 171 v~n~~g~~~I~sVei~~~~~-~W~~m~ 196 (247)
+...+|...|+.|||...++ +|+...
T Consensus 370 ~A~sggg~~I~rVEVS~DgG~tW~~A~ 396 (466)
T 1sox_A 370 YAWSGGGREVVRVDVSLDGGRTWKVAR 396 (466)
T ss_dssp EEECSTTCCEEEEEEESBTTSSCEECE
T ss_pred EEEcCCCCCEEEEEEEcCCCCcceEee
Confidence 34544334799999998764 898655
No 23
>2kct_A Cytochrome C-type biogenesis protein CCME; solution structure, heme chaperone, cytochrome C biogenesis, OB-fold domain, NESG, PSI-2; NMR {Desulfovibrio vulgaris str}
Probab=27.25 E-value=61 Score=23.64 Aligned_cols=28 Identities=21% Similarity=0.514 Sum_probs=20.8
Q ss_pred ceEEEEEecC--CcE--EEEccccCCCCCCCe
Q 025827 213 ALSFKVTTSD--GRT--VISNNVAPANWNFGQ 240 (247)
Q Consensus 213 p~~vRvT~~~--G~~--v~~~~vip~~w~~g~ 240 (247)
-++|+|||.+ +++ |.++.++|..|+-|.
T Consensus 30 ~v~F~vtD~~~~~~~v~V~Y~GilPDlFrEGq 61 (94)
T 2kct_A 30 GVRFRLEDKDNTSKTVWVLYKGAVPDTFKPGV 61 (94)
T ss_dssp EEEEEEECSSCTTCEEEEEEESCCCTTCCTTC
T ss_pred EEEEEEEcCCCCCcEEEEEECCCCCccccCCC
Confidence 5888888862 444 556789999998875
No 24
>2c9r_A COPC, copper resistance protein C; copper transport, copper proteins, copper dissociation const metal-binding, electron transport; 2.0A {Pseudomonas syringae PV} PDB: 1m42_A 1nm4_A 1ot4_A 2c9p_A 2c9q_A
Probab=23.92 E-value=43 Score=24.48 Aligned_cols=27 Identities=26% Similarity=0.577 Sum_probs=21.1
Q ss_pred cccCCeEEEEEEEeeecc---CCceEEEEc
Q 025827 135 QYKAGIVPVQYRRVACKK---SGGIRFTIN 161 (247)
Q Consensus 135 ~~~~G~~~i~~~~V~C~~---~gni~~~v~ 161 (247)
.+..|.+.|+||.|+=+- .|.+.|.|+
T Consensus 73 ~L~~G~YtV~WrvvS~DGH~~~G~~~FtV~ 102 (102)
T 2c9r_A 73 PLTAGTYKVDWRAVSSDTFPITGSVTFKVK 102 (102)
T ss_dssp CCCSEEEEEEEEECCTTCCCEEEEEEEEEC
T ss_pred CCCCceEEEEEEEEecCCCccCCEEEEEEC
Confidence 457899999999999653 457788775
No 25
>2kvz_A ISPE; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, unknown function; NMR {Listeria monocytogenes}
Probab=23.36 E-value=78 Score=22.61 Aligned_cols=32 Identities=6% Similarity=0.126 Sum_probs=25.5
Q ss_pred cceEEEEEecCCcEEEEccccCCCCCCCeEEeCC
Q 025827 212 QALSFKVTTSDGRTVISNNVAPANWNFGQTYTGR 245 (247)
Q Consensus 212 ~p~~vRvT~~~G~~v~~~~vip~~w~~g~~Y~~~ 245 (247)
.|+.|+..|.+|+.|....++- ...|..|+..
T Consensus 7 ~~VtV~YvDe~Gn~La~~~~lt--G~vG~~Y~t~ 38 (85)
T 2kvz_A 7 NQVTVNYLDENNTSIAPSLYLS--GLFNEAYNVP 38 (85)
T ss_dssp CCEEEEEECSSSCEEEEEEEEC--CCTTCCCCCC
T ss_pred CeEEEEEECCCCCCCCCCeEEe--eeCCCcceec
Confidence 5899999999999999888774 4566777654
No 26
>1lyq_A PCOC copper resistance protein; beta barrel, IG domain, metal binding protein; 1.50A {Escherichia coli} SCOP: b.1.18.17 PDB: 1ix2_A
Probab=23.26 E-value=45 Score=24.50 Aligned_cols=27 Identities=30% Similarity=0.548 Sum_probs=21.1
Q ss_pred cccCCeEEEEEEEeeecc---CCceEEEEc
Q 025827 135 QYKAGIVPVQYRRVACKK---SGGIRFTIN 161 (247)
Q Consensus 135 ~~~~G~~~i~~~~V~C~~---~gni~~~v~ 161 (247)
.+..|.+.|+||.|+=+- .|.+.|.|+
T Consensus 75 ~L~~G~YtV~WrvvS~DGH~~~G~~~FtV~ 104 (104)
T 1lyq_A 75 PLPAGTYRVDWRAVSSDTHPITGNYTFTVK 104 (104)
T ss_dssp CCCSEEEEEEEEECCTTSCCEEEEEEEEEC
T ss_pred CCCCceEEEEEEEEecCCCccCCEEEEEEC
Confidence 457899999999999653 457888775
No 27
>4b2v_A S64; toxin, ICK; NMR {Sicarius dolichocephalus}
Probab=22.30 E-value=17 Score=20.83 Aligned_cols=13 Identities=38% Similarity=0.945 Sum_probs=9.9
Q ss_pred CCCCceEEEEEcC
Q 025827 72 LNCGACYAIKCVN 84 (247)
Q Consensus 72 ~~CG~C~~V~c~~ 84 (247)
.-||+|++-.|.+
T Consensus 19 wccgrcirnecrn 31 (32)
T 4b2v_A 19 WCCGRCIRNECRN 31 (32)
T ss_dssp CCSSEEETTEEEC
T ss_pred hhhhHHHHhhhcC
Confidence 4699999877753
No 28
>1sr3_A APO-CCME; OB fold, beta barrel, flexible C-terminal domain, chaperone; NMR {Escherichia coli} SCOP: b.40.9.1
Probab=22.06 E-value=78 Score=24.70 Aligned_cols=28 Identities=21% Similarity=0.431 Sum_probs=20.4
Q ss_pred ceEEEEEecCC-cEEEEccccCCCCCCCe
Q 025827 213 ALSFKVTTSDG-RTVISNNVAPANWNFGQ 240 (247)
Q Consensus 213 p~~vRvT~~~G-~~v~~~~vip~~w~~g~ 240 (247)
.++|+|||... -.|+++.++|..|+-|.
T Consensus 50 ~v~F~vtD~~~~v~V~Y~GilPDlFrEGq 78 (136)
T 1sr3_A 50 KVTFTIYDAEGSVDVSYEGILPDLFREGQ 78 (136)
T ss_dssp EEEEEEECSSCEEEEEEESCCCTTCCTTS
T ss_pred EEEEEEEeCCcEEEEEECCCCCccccCCC
Confidence 58888888644 33556789999988774
No 29
>2kt7_A Putative peptidoglycan bound protein (LPXTG motif); immunoglobulin fold, all-beta, peptidoglycan binding protein, structural genomics; NMR {Listeria monocytogenes}
Probab=21.69 E-value=1.1e+02 Score=22.56 Aligned_cols=30 Identities=10% Similarity=0.257 Sum_probs=24.6
Q ss_pred CcceEEEEEecCCcEEEEccccCCCCCCCeEEeCC
Q 025827 211 GQALSFKVTTSDGRTVISNNVAPANWNFGQTYTGR 245 (247)
Q Consensus 211 g~p~~vRvT~~~G~~v~~~~vip~~w~~g~~Y~~~ 245 (247)
+.++.|+..|.+|+.|....++. |..|++.
T Consensus 5 ~~~VtV~YvDe~Gn~Ia~~~~lt-----G~~Y~t~ 34 (102)
T 2kt7_A 5 NFTVKVEYVDADGAEIAPSDTLT-----DYHYVST 34 (102)
T ss_dssp TCCEEEEEEETTSSEEEEEEEEC-----SSEEECC
T ss_pred CCEEEEEEEcCCCCCCCCCEeec-----CCccccc
Confidence 35899999999999999888777 5777764
Done!