Query 025828
Match_columns 247
No_of_seqs 120 out of 444
Neff 6.6
Searched_HMMs 29240
Date Mon Mar 25 18:28:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025828.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025828hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3uzd_A 14-3-3 protein gamma; s 100.0 1.5E-96 5E-101 647.0 24.2 239 3-244 1-241 (248)
2 3iqu_A 14-3-3 protein sigma; s 100.0 7.6E-96 3E-100 638.9 22.5 232 3-237 5-236 (236)
3 3ubw_A 14-3-3E, 14-3-3 protein 100.0 2E-95 7E-100 642.3 24.3 234 3-239 28-261 (261)
4 2br9_A 14-3-3E, 14-3-3 protein 100.0 2.1E-93 7E-98 624.4 24.1 233 3-238 2-234 (234)
5 1o9d_A 14-3-3-like protein C; 100.0 1.5E-93 5.1E-98 632.7 23.5 240 4-245 6-246 (260)
6 2npm_A 14-3-3 domain containin 100.0 5.1E-92 1.7E-96 622.4 24.1 232 5-239 27-260 (260)
7 3efz_A 14-3-3 protein; 14-3-3, 100.0 4.2E-89 1.4E-93 603.5 15.1 227 5-242 28-261 (268)
8 2o8p_A 14-3-3 domain containin 100.0 7E-81 2.4E-85 540.4 20.1 218 5-234 2-226 (227)
9 3nf1_A KLC 1, kinesin light ch 95.8 0.46 1.6E-05 39.1 15.6 187 7-209 28-227 (311)
10 3edt_B KLC 2, kinesin light ch 95.1 1.1 3.6E-05 36.0 16.5 59 150-209 143-201 (283)
11 3vtx_A MAMA; tetratricopeptide 94.7 1 3.6E-05 34.5 17.1 163 7-205 6-169 (184)
12 3u3w_A Transcriptional activat 94.7 1.6 5.6E-05 36.6 17.3 58 150-209 171-228 (293)
13 3n71_A Histone lysine methyltr 94.6 0.41 1.4E-05 45.1 12.8 100 96-209 326-425 (490)
14 3qww_A SET and MYND domain-con 93.5 0.88 3E-05 42.2 12.4 116 96-229 315-430 (433)
15 3qwp_A SET and MYND domain-con 93.2 0.45 1.5E-05 44.0 9.9 58 151-209 346-403 (429)
16 3u4t_A TPR repeat-containing p 92.3 1.1 3.8E-05 36.2 10.2 53 152-205 197-249 (272)
17 3qww_A SET and MYND domain-con 92.2 0.81 2.8E-05 42.4 10.1 58 151-209 315-372 (433)
18 3edt_B KLC 2, kinesin light ch 92.0 0.77 2.6E-05 36.9 8.8 58 150-208 101-158 (283)
19 2qfc_A PLCR protein; TPR, HTH, 91.7 5.2 0.00018 33.4 16.3 56 150-207 171-226 (293)
20 3n71_A Histone lysine methyltr 91.5 1 3.4E-05 42.5 10.1 59 151-210 326-384 (490)
21 4g1t_A Interferon-induced prot 91.1 7.6 0.00026 34.1 15.9 50 150-204 350-399 (472)
22 3hym_B Cell division cycle pro 90.5 6.3 0.00022 32.3 15.4 46 150-204 252-297 (330)
23 4abn_A Tetratricopeptide repea 90.4 10 0.00035 34.5 16.8 173 7-205 103-286 (474)
24 3fp2_A TPR repeat-containing p 90.2 9.7 0.00033 33.9 15.9 49 150-207 444-492 (537)
25 3ulq_A Response regulator aspa 89.2 2.6 8.7E-05 36.6 10.2 72 122-207 101-173 (383)
26 3qwp_A SET and MYND domain-con 88.9 1.2 4.2E-05 41.0 8.2 58 151-209 304-361 (429)
27 4i17_A Hypothetical protein; T 88.8 7.4 0.00025 30.7 13.2 60 7-70 8-67 (228)
28 3ulq_A Response regulator aspa 88.8 11 0.00037 32.5 15.5 176 11-208 108-295 (383)
29 1fch_A Peroxisomal targeting s 88.6 10 0.00034 31.8 15.0 59 7-70 99-157 (368)
30 3nf1_A KLC 1, kinesin light ch 88.6 8.7 0.0003 31.1 14.9 27 8-34 71-97 (311)
31 3ro2_A PINS homolog, G-protein 88.3 9 0.00031 31.0 17.6 189 7-208 6-214 (338)
32 4gcn_A Protein STI-1; structur 88.2 1.4 4.9E-05 32.5 6.8 48 150-206 24-71 (127)
33 3q15_A PSP28, response regulat 88.0 1.8 6.1E-05 37.7 8.3 74 122-208 99-172 (378)
34 4b4t_Q 26S proteasome regulato 87.5 13 0.00046 32.1 13.9 57 150-208 191-247 (434)
35 2pl2_A Hypothetical conserved 87.3 9.8 0.00033 30.3 13.2 59 7-70 6-64 (217)
36 4a1s_A PINS, partner of inscut 87.0 14 0.00047 31.7 20.3 189 7-208 49-254 (411)
37 2y4t_A DNAJ homolog subfamily 86.6 15 0.00052 31.8 14.8 47 150-205 311-357 (450)
38 3q15_A PSP28, response regulat 86.2 15 0.00053 31.5 15.8 53 150-206 238-290 (378)
39 4eqf_A PEX5-related protein; a 86.0 15 0.0005 31.0 13.8 27 8-34 67-93 (365)
40 3ro3_A PINS homolog, G-protein 85.7 7.8 0.00027 27.6 12.3 55 150-207 105-159 (164)
41 2gw1_A Mitochondrial precursor 85.6 18 0.00061 31.7 15.3 55 150-205 205-265 (514)
42 3sf4_A G-protein-signaling mod 84.6 17 0.00059 30.6 17.6 55 150-207 203-257 (406)
43 3rkv_A Putative peptidylprolyl 83.4 1.8 6.2E-05 32.7 5.3 55 150-205 27-91 (162)
44 2y4t_A DNAJ homolog subfamily 83.3 21 0.00073 30.8 16.9 168 10-205 147-323 (450)
45 2ho1_A Type 4 fimbrial biogene 82.5 16 0.00055 28.8 14.6 59 7-70 38-96 (252)
46 2gw1_A Mitochondrial precursor 82.5 24 0.00084 30.8 15.5 172 7-205 305-477 (514)
47 3ro2_A PINS homolog, G-protein 81.7 19 0.00065 29.0 16.2 56 150-208 199-254 (338)
48 4gco_A Protein STI-1; structur 81.2 4.6 0.00016 29.7 6.8 47 150-205 29-75 (126)
49 2xpi_A Anaphase-promoting comp 80.8 32 0.0011 31.0 19.3 47 150-205 532-578 (597)
50 3sf4_A G-protein-signaling mod 80.7 24 0.00083 29.6 20.0 189 7-208 10-218 (406)
51 3ieg_A DNAJ homolog subfamily 80.6 22 0.00076 29.1 18.6 47 150-205 288-334 (359)
52 3ro3_A PINS homolog, G-protein 80.5 5.6 0.00019 28.4 7.0 56 150-208 25-80 (164)
53 2q7f_A YRRB protein; TPR, prot 80.3 19 0.00063 28.0 15.9 59 7-70 58-116 (243)
54 4eqf_A PEX5-related protein; a 80.1 26 0.00088 29.5 17.2 29 6-34 99-127 (365)
55 2xpi_A Anaphase-promoting comp 79.8 34 0.0012 30.8 18.8 55 150-206 491-545 (597)
56 3u3w_A Transcriptional activat 79.7 6.7 0.00023 32.7 8.1 54 150-207 131-185 (293)
57 3ieg_A DNAJ homolog subfamily 79.5 24 0.00083 28.9 17.9 168 10-206 124-301 (359)
58 2pl2_A Hypothetical conserved 78.7 23 0.00078 28.1 16.6 47 6-56 39-85 (217)
59 2vq2_A PILW, putative fimbrial 78.6 20 0.00067 27.3 16.0 166 7-206 9-176 (225)
60 4a1s_A PINS, partner of inscut 76.9 34 0.0012 29.1 16.3 55 151-208 240-294 (411)
61 3fp2_A TPR repeat-containing p 76.8 39 0.0013 29.8 15.0 162 9-207 246-408 (537)
62 4g1t_A Interferon-induced prot 76.6 5.6 0.00019 35.0 6.9 54 151-205 68-122 (472)
63 2q7f_A YRRB protein; TPR, prot 76.6 24 0.00083 27.3 11.7 60 7-71 24-83 (243)
64 1xnf_A Lipoprotein NLPI; TPR, 76.5 26 0.0009 27.7 12.9 29 176-205 215-243 (275)
65 4gcn_A Protein STI-1; structur 76.3 7.8 0.00027 28.3 6.7 53 150-204 58-110 (127)
66 1elr_A TPR2A-domain of HOP; HO 76.1 8 0.00027 26.7 6.5 54 150-205 54-107 (131)
67 3hym_B Cell division cycle pro 75.9 30 0.001 28.0 17.4 56 150-206 209-265 (330)
68 2l6j_A TPR repeat-containing p 75.3 9.5 0.00032 25.9 6.6 45 151-204 21-65 (111)
69 3lf9_A 4E10_D0_1IS1A_001_C (T1 74.2 19 0.00065 27.6 8.2 50 20-69 11-60 (121)
70 1na3_A Designed protein CTPR2; 74.1 12 0.00043 24.2 6.8 47 150-205 25-71 (91)
71 3gw4_A Uncharacterized protein 73.9 11 0.00037 28.6 7.2 55 151-207 83-137 (203)
72 3cv0_A Peroxisome targeting si 73.5 34 0.0012 27.6 16.2 60 7-71 22-81 (327)
73 1fch_A Peroxisomal targeting s 73.3 39 0.0013 28.1 18.7 58 7-69 65-122 (368)
74 2qfc_A PLCR protein; TPR, HTH, 73.3 13 0.00044 30.9 8.1 65 150-220 212-276 (293)
75 3k9i_A BH0479 protein; putativ 73.2 11 0.00039 26.5 6.8 47 151-206 44-90 (117)
76 1hz4_A MALT regulatory protein 72.7 12 0.0004 31.9 7.8 55 151-206 110-164 (373)
77 2xev_A YBGF; tetratricopeptide 72.4 17 0.00058 25.3 7.6 49 151-205 56-104 (129)
78 2kck_A TPR repeat; tetratricop 71.8 14 0.00049 24.5 6.8 46 151-205 23-68 (112)
79 2dba_A Smooth muscle cell asso 71.6 10 0.00036 26.9 6.3 49 151-205 45-93 (148)
80 3uq3_A Heat shock protein STI1 71.4 33 0.0011 26.6 15.2 28 7-34 80-107 (258)
81 3sz7_A HSC70 cochaperone (SGT) 71.4 16 0.00056 27.2 7.6 46 151-205 62-107 (164)
82 3qky_A Outer membrane assembly 70.9 39 0.0013 27.1 18.3 65 5-73 14-80 (261)
83 4gyw_A UDP-N-acetylglucosamine 70.8 82 0.0028 30.8 16.2 57 7-68 10-66 (723)
84 3cv0_A Peroxisome targeting si 70.8 40 0.0014 27.2 16.0 60 7-71 56-115 (327)
85 2kc7_A BFR218_protein; tetratr 69.7 18 0.00061 24.2 6.9 47 151-205 17-63 (99)
86 3uq3_A Heat shock protein STI1 69.6 37 0.0013 26.3 15.0 26 9-34 41-66 (258)
87 2ifu_A Gamma-SNAP; membrane fu 69.3 49 0.0017 27.6 12.1 52 150-204 171-222 (307)
88 2xev_A YBGF; tetratricopeptide 68.7 22 0.00074 24.8 7.4 49 151-205 19-67 (129)
89 3upv_A Heat shock protein STI1 66.3 20 0.00067 25.2 6.8 46 151-205 21-66 (126)
90 4gco_A Protein STI-1; structur 66.3 19 0.00063 26.2 6.8 47 150-205 63-109 (126)
91 1lyp_A CAP18; lipopolysacchari 65.8 14 0.00048 21.1 4.4 26 85-110 4-29 (32)
92 2hr2_A Hypothetical protein; a 64.9 23 0.0008 28.1 7.5 54 150-205 27-85 (159)
93 2lni_A Stress-induced-phosphop 64.6 23 0.00077 24.4 6.8 46 151-205 67-112 (133)
94 3k9i_A BH0479 protein; putativ 64.5 9 0.00031 27.1 4.5 50 151-206 7-56 (117)
95 2xcb_A PCRH, regulatory protei 64.0 30 0.001 25.1 7.7 49 150-207 68-116 (142)
96 3q49_B STIP1 homology and U bo 63.5 23 0.0008 24.9 6.8 16 190-205 90-105 (137)
97 1elr_A TPR2A-domain of HOP; HO 63.0 26 0.00088 23.9 6.8 50 150-208 20-69 (131)
98 3upv_A Heat shock protein STI1 62.5 25 0.00087 24.6 6.8 48 151-207 55-102 (126)
99 3vtx_A MAMA; tetratricopeptide 62.2 22 0.00077 26.6 6.8 47 150-205 21-67 (184)
100 3ma5_A Tetratricopeptide repea 61.9 35 0.0012 23.3 9.6 73 150-237 23-95 (100)
101 3rkv_A Putative peptidylprolyl 61.6 43 0.0015 24.7 8.2 70 151-237 80-149 (162)
102 2ifu_A Gamma-SNAP; membrane fu 60.4 73 0.0025 26.5 14.9 54 150-207 131-185 (307)
103 2vgx_A Chaperone SYCD; alterna 60.2 25 0.00085 26.2 6.6 46 151-205 72-117 (148)
104 1elw_A TPR1-domain of HOP; HOP 59.7 27 0.00092 23.2 6.2 45 151-204 55-99 (118)
105 1qqe_A Vesicular transport pro 59.0 27 0.00093 29.0 7.3 53 151-206 54-106 (292)
106 2vyi_A SGTA protein; chaperone 58.9 34 0.0012 23.1 6.8 47 151-206 63-109 (131)
107 1elw_A TPR1-domain of HOP; HOP 58.8 35 0.0012 22.6 6.8 48 150-206 20-67 (118)
108 2vyi_A SGTA protein; chaperone 58.7 34 0.0012 23.1 6.8 47 151-206 29-75 (131)
109 1ihg_A Cyclophilin 40; ppiase 58.4 11 0.00039 33.3 5.0 55 150-205 239-301 (370)
110 1a17_A Serine/threonine protei 57.3 33 0.0011 24.7 6.8 46 151-205 64-109 (166)
111 3gyz_A Chaperone protein IPGC; 56.6 22 0.00074 27.2 5.8 47 150-205 86-132 (151)
112 2dba_A Smooth muscle cell asso 56.3 37 0.0013 23.9 6.8 46 151-205 82-127 (148)
113 2fbn_A 70 kDa peptidylprolyl i 56.3 37 0.0013 26.0 7.2 49 151-205 55-116 (198)
114 3as5_A MAMA; tetratricopeptide 55.9 54 0.0019 23.6 16.2 58 8-70 10-67 (186)
115 4ga2_A E3 SUMO-protein ligase 55.7 35 0.0012 25.3 6.8 46 151-205 48-93 (150)
116 1na0_A Designed protein CTPR3; 54.5 45 0.0015 22.2 6.8 46 151-205 26-71 (125)
117 1a17_A Serine/threonine protei 53.8 41 0.0014 24.1 6.8 47 150-205 29-75 (166)
118 3caz_A BAR protein; thermo-aci 53.2 99 0.0034 25.8 10.0 112 11-166 99-210 (294)
119 3bee_A Putative YFRE protein; 52.9 20 0.00068 25.3 4.6 28 7-34 44-71 (93)
120 2e2e_A Formate-dependent nitri 52.6 41 0.0014 25.0 6.8 46 151-205 98-143 (177)
121 1na0_A Designed protein CTPR3; 52.3 49 0.0017 22.0 6.8 47 150-205 59-105 (125)
122 1xnf_A Lipoprotein NLPI; TPR, 51.6 56 0.0019 25.6 7.7 47 150-205 93-139 (275)
123 2fbn_A 70 kDa peptidylprolyl i 51.5 42 0.0014 25.7 6.8 46 151-205 105-150 (198)
124 4gfq_A Ribosome-recycling fact 51.2 46 0.0016 27.8 7.2 73 40-113 127-199 (209)
125 1kt0_A FKBP51, 51 kDa FK506-bi 50.9 26 0.0009 31.7 6.2 54 150-205 284-345 (457)
126 1hh8_A P67PHOX, NCF-2, neutrop 50.8 43 0.0015 25.5 6.8 47 150-205 53-99 (213)
127 1p5q_A FKBP52, FK506-binding p 50.5 15 0.00051 31.7 4.3 54 151-205 164-224 (336)
128 3urz_A Uncharacterized protein 50.1 43 0.0015 26.1 6.8 29 6-34 4-32 (208)
129 2lni_A Stress-induced-phosphop 49.7 24 0.00083 24.3 4.7 46 151-205 33-78 (133)
130 2kat_A Uncharacterized protein 49.3 60 0.0021 22.2 8.9 49 150-207 35-83 (115)
131 2ho1_A Type 4 fimbrial biogene 49.2 90 0.0031 24.2 15.6 61 7-72 72-132 (252)
132 3gw4_A Uncharacterized protein 47.7 83 0.0028 23.3 15.3 57 150-209 123-179 (203)
133 3as5_A MAMA; tetratricopeptide 47.2 59 0.002 23.4 6.8 47 151-206 93-139 (186)
134 1wao_1 Serine/threonine protei 46.7 40 0.0014 30.8 6.8 15 190-204 87-101 (477)
135 1dd5_A Ribosome recycling fact 46.6 69 0.0024 26.2 7.5 74 39-113 102-175 (185)
136 3gyz_A Chaperone protein IPGC; 46.4 58 0.002 24.7 6.8 47 150-205 52-98 (151)
137 2v5f_A Prolyl 4-hydroxylase su 45.5 74 0.0025 22.1 7.3 53 151-205 22-74 (104)
138 1ise_A Ribosome recycling fact 45.0 72 0.0025 26.1 7.3 73 39-112 102-174 (185)
139 2yhc_A BAMD, UPF0169 lipoprote 44.9 1.1E+02 0.0037 23.9 17.7 65 7-73 5-69 (225)
140 1hxi_A PEX5, peroxisome target 44.5 30 0.001 24.8 4.6 47 150-205 67-113 (121)
141 1is1_A Ribosome recycling fact 44.2 76 0.0026 25.9 7.4 73 39-112 102-174 (185)
142 2h6f_A Protein farnesyltransfe 44.1 1.7E+02 0.0057 25.8 12.2 58 7-69 98-156 (382)
143 2ooe_A Cleavage stimulation fa 43.8 28 0.00097 31.5 5.3 53 150-211 62-114 (530)
144 2c2l_A CHIP, carboxy terminus 43.6 38 0.0013 28.1 5.7 48 156-207 53-102 (281)
145 1ge9_A Ribosome recycling fact 43.2 85 0.0029 25.6 7.5 71 39-113 104-174 (184)
146 1wqg_A Ribosome recycling fact 43.1 82 0.0028 25.7 7.4 69 39-112 102-174 (185)
147 2vgx_A Chaperone SYCD; alterna 42.3 75 0.0026 23.4 6.8 46 151-205 38-83 (148)
148 1hh8_A P67PHOX, NCF-2, neutrop 42.1 46 0.0016 25.3 5.6 54 150-204 87-148 (213)
149 1zu2_A Mitochondrial import re 41.5 40 0.0014 26.7 5.1 95 130-238 42-143 (158)
150 1qqe_A Vesicular transport pro 41.4 76 0.0026 26.2 7.3 53 151-206 94-147 (292)
151 1hxi_A PEX5, peroxisome target 41.2 89 0.003 22.1 6.8 47 150-205 33-79 (121)
152 2fo7_A Synthetic consensus TPR 40.9 78 0.0027 21.1 6.2 46 151-205 52-97 (136)
153 2ond_A Cleavage stimulation fa 40.6 59 0.002 27.0 6.5 47 150-205 185-231 (308)
154 3sz7_A HSC70 cochaperone (SGT) 40.4 1.1E+02 0.0036 22.4 10.4 26 9-34 14-39 (164)
155 1eh1_A Ribosome recycling fact 40.2 73 0.0025 26.1 6.6 74 39-113 103-176 (185)
156 3qky_A Outer membrane assembly 39.2 1.4E+02 0.0048 23.6 11.5 63 10-73 152-223 (261)
157 4ga2_A E3 SUMO-protein ligase 39.1 65 0.0022 23.7 5.9 26 9-34 34-59 (150)
158 3u4t_A TPR repeat-containing p 38.3 1.4E+02 0.0048 23.2 12.3 49 150-207 158-209 (272)
159 3q49_B STIP1 homology and U bo 38.2 97 0.0033 21.4 9.3 11 152-162 61-71 (137)
160 2kat_A Uncharacterized protein 38.1 93 0.0032 21.1 11.9 60 6-70 19-78 (115)
161 2e2e_A Formate-dependent nitri 37.6 84 0.0029 23.2 6.4 48 150-205 60-109 (177)
162 2wh5_A Acyl-COA-binding domain 37.4 59 0.002 24.1 5.2 48 20-69 10-73 (106)
163 2h6f_A Protein farnesyltransfe 37.3 2.1E+02 0.0073 25.1 11.5 48 8-59 202-249 (382)
164 2ond_A Cleavage stimulation fa 37.1 1.7E+02 0.0059 24.0 17.0 51 150-205 219-269 (308)
165 4i17_A Hypothetical protein; T 36.9 74 0.0025 24.6 6.2 47 150-205 58-104 (228)
166 1ya0_A SMG-7 transcript varian 36.4 93 0.0032 29.2 7.6 65 130-209 158-235 (497)
167 2r5s_A Uncharacterized protein 33.6 1.4E+02 0.0047 22.2 7.1 34 6-42 108-141 (176)
168 1p5q_A FKBP52, FK506-binding p 33.5 95 0.0032 26.5 6.8 46 151-205 213-258 (336)
169 3ma5_A Tetratricopeptide repea 32.7 1.1E+02 0.0039 20.5 10.4 58 7-69 8-65 (100)
170 3u64_A Protein TP_0956; tetrat 32.0 44 0.0015 29.5 4.3 48 150-205 220-268 (301)
171 4gyw_A UDP-N-acetylglucosamine 31.8 85 0.0029 30.6 6.8 47 150-205 93-139 (723)
172 2g0u_A Type III secretion syst 31.4 29 0.00098 25.4 2.4 59 122-187 6-68 (92)
173 1w3b_A UDP-N-acetylglucosamine 31.2 2.3E+02 0.0079 23.6 15.6 28 7-34 68-95 (388)
174 3ub0_A Non-structural protein 31.0 33 0.0011 28.3 3.0 38 150-207 19-56 (199)
175 2wb7_A PT26-6P; extra chromoso 28.7 1.9E+02 0.0064 27.5 8.1 52 138-191 436-488 (526)
176 2kck_A TPR repeat; tetratricop 28.1 1.2E+02 0.0042 19.5 8.0 26 9-34 9-34 (112)
177 4h7y_A Dual specificity protei 27.2 63 0.0022 25.9 4.0 74 117-204 10-87 (161)
178 2if4_A ATFKBP42; FKBP-like, al 25.9 88 0.003 26.7 5.2 49 151-205 196-258 (338)
179 2c2l_A CHIP, carboxy terminus 24.8 94 0.0032 25.6 5.0 28 7-34 5-32 (281)
180 2vq2_A PILW, putative fimbrial 23.7 2.2E+02 0.0076 21.0 15.9 164 7-204 43-209 (225)
181 2l6j_A TPR repeat-containing p 23.5 1.6E+02 0.0054 19.2 5.7 29 6-34 4-32 (111)
182 4fhn_B Nucleoporin NUP120; pro 23.2 1.3E+02 0.0045 30.8 6.6 60 10-71 903-964 (1139)
183 2xcb_A PCRH, regulatory protei 23.0 2E+02 0.007 20.3 11.0 26 9-34 21-46 (142)
184 3mkr_A Coatomer subunit epsilo 22.9 2E+02 0.0068 23.8 6.8 46 151-205 183-228 (291)
185 1w3b_A UDP-N-acetylglucosamine 22.4 3.3E+02 0.011 22.5 16.1 25 10-34 37-61 (388)
186 2vsy_A XCC0866; transferase, g 21.9 1.8E+02 0.0062 26.3 6.8 46 151-205 74-119 (568)
187 1xi4_A Clathrin heavy chain; a 21.9 7.9E+02 0.027 26.7 13.2 24 181-204 1284-1307(1630)
188 2vsy_A XCC0866; transferase, g 21.4 4.5E+02 0.015 23.6 16.3 28 7-34 24-51 (568)
189 3qou_A Protein YBBN; thioredox 21.2 2.7E+02 0.0094 22.7 7.3 29 6-34 219-247 (287)
190 1ihg_A Cyclophilin 40; ppiase 20.8 1.5E+02 0.0051 25.8 5.7 46 151-205 290-335 (370)
191 1kt0_A FKBP51, 51 kDa FK506-bi 20.7 3.4E+02 0.012 24.1 8.3 45 151-204 334-378 (457)
No 1
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=100.00 E-value=1.5e-96 Score=647.00 Aligned_cols=239 Identities=59% Similarity=0.924 Sum_probs=223.7
Q ss_pred CCcHHhHHHHHHHHHHhcChHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhhhhhcchhh
Q 025828 3 TPTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEE 82 (247)
Q Consensus 3 ~~~re~~~~~Aklaeq~ery~dm~~~mk~ii~~~~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~ieqk~~~~~~~~ 82 (247)
|.+|++++|+||||+||||||||+++||++++ ++ ++||.||||||||||||+||++|+|||+|++++|+++.+|++.
T Consensus 1 m~~re~lv~~AklaeqaeRyddM~~~Mk~v~~--~~-~eLt~EERnLLSvAYKNvig~rR~swRiissieqke~~~~~~~ 77 (248)
T 3uzd_A 1 MVDREQLVQKARLAEQAERYDDMAAAMKNVTE--LN-EPLSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTSADGNEK 77 (248)
T ss_dssp -CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHT--TC-SCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCC
T ss_pred CCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHh--cC-CcCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhhccCCHH
Confidence 35799999999999999999999999999998 76 9999999999999999999999999999999999998888888
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCC--chhhHHhhhccccccchhhcccchhHHHHHHHHHHHHHHH
Q 025828 83 HVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAG--ESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAA 160 (247)
Q Consensus 83 ~~~~i~~yk~ki~~EL~~~C~eii~lid~~Lip~~~~~--eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A 160 (247)
+++.+++||++|++||..+|++||++||++|||.++++ +++|||+|||||||||+|||..|++|+++++.|+++|++|
T Consensus 78 ~~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~~~eskVFY~KmKGDyyRYlAE~~~g~~r~~~~~~a~~aY~~A 157 (248)
T 3uzd_A 78 KIEMVRAYREKIEKELEAVCQDVLSLLDNYLIKNCSETQYESKVFYLKMKGDYYRYLAEVATGEKRATVVESSEKAYSEA 157 (248)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCcCCCcchhHHHHHHHhhhhHHHHHHHhcCchHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999 9999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHHHhhcccCCCchHhHHHHHHHHHhhHhhhhccc
Q 025828 161 QDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDM 240 (247)
Q Consensus 161 ~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~a~~~ld~l~ee~~~d~~~ilqlLrdNl~~W~~e~ 240 (247)
+++|+.+||||||+|||||||||||||||+|+|++||.|||+|||+|++++|+++|++|+|+|+||||||||||+|+++.
T Consensus 158 ~~iA~~~L~pthPirLGLaLNfSVFyYEIln~~~~Ac~lAk~Afd~Ai~eld~l~eesykDstlImqLLRDNLtlWts~~ 237 (248)
T 3uzd_A 158 HEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQ 237 (248)
T ss_dssp HHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHTGGGCCTTTHHHHHHHHHHHHHHHHHHC---
T ss_pred HHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhcCCccchHHHHHHHHHHHHHHHhhcccC
Confidence 99999899999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred cccc
Q 025828 241 QEQI 244 (247)
Q Consensus 241 ~~~~ 244 (247)
++++
T Consensus 238 ~~~~ 241 (248)
T 3uzd_A 238 QDDD 241 (248)
T ss_dssp ----
T ss_pred cccc
Confidence 6654
No 2
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=100.00 E-value=7.6e-96 Score=638.87 Aligned_cols=232 Identities=60% Similarity=0.927 Sum_probs=227.3
Q ss_pred CCcHHhHHHHHHHHHHhcChHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhhhhhcchhh
Q 025828 3 TPTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEE 82 (247)
Q Consensus 3 ~~~re~~~~~Aklaeq~ery~dm~~~mk~ii~~~~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~ieqk~~~~~~~~ 82 (247)
+.+|++++|+||||+||||||||+++||++++ ++ ++||.||||||||||||+||++|+|||+|++++|+++.+|++.
T Consensus 5 ~~~re~~v~~AklaeqaeRyddM~~~mk~v~~--~~-~eLs~EERnLLSvaYKNvig~rR~swRiissieqke~~~~~~~ 81 (236)
T 3iqu_A 5 SMERASLIQKAKLAEQAERYEDMAAFMKGAVE--KG-EELSCEERNLLSVAYKNVVGGQRAAWRVLSSIEQKSNEEGSEE 81 (236)
T ss_dssp TSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH--TC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCCC
T ss_pred cccHHHHHHHHHHHHHhccHHHHHHHHHHHHh--cC-CcCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHhhcCCHH
Confidence 34799999999999999999999999999999 76 9999999999999999999999999999999999998888888
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhHHhhhccccccchhhcccchhHHHHHHHHHHHHHHHHH
Q 025828 83 HVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQD 162 (247)
Q Consensus 83 ~~~~i~~yk~ki~~EL~~~C~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~ 162 (247)
+++.+++||++|++||..+|++|+++||++|||.++++|++|||+|||||||||+|||..|++|+++++.|+++|++|++
T Consensus 82 ~~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~eskVFY~KmKGDyyRYlAE~~~g~~r~~~~e~a~~aY~~A~~ 161 (236)
T 3iqu_A 82 KGPEVREYREKVETELQGVCDTVLGLLDSHLIKEAGDAESRVFYLKMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMD 161 (236)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCSTTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCchHHHHHHHHhhhhHHHHHHHhcCchHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHHHhhcccCCCchHhHHHHHHHHHhhHhhhh
Q 025828 163 IALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWT 237 (247)
Q Consensus 163 ~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~a~~~ld~l~ee~~~d~~~ilqlLrdNl~~W~ 237 (247)
+|+++||||||+||||+||||||||||+|+|++||++||+|||+|++++|+++|++|+|+|+||||||||||+|+
T Consensus 162 iA~~~L~pthPirLGLaLNfSVFyyEiln~~~~Ac~lAk~Afd~Ai~eld~l~eesykDstlImqLLRDNLtlWt 236 (236)
T 3iqu_A 162 ISKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFDEAMADLHTLSEDSYKDSTLIMQLLRDNLTLWT 236 (236)
T ss_dssp HHHHHSCTTCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhccChhhhHHHHHHHHHHHHHHhccC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999996
No 3
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=100.00 E-value=2e-95 Score=642.29 Aligned_cols=234 Identities=70% Similarity=1.077 Sum_probs=227.0
Q ss_pred CCcHHhHHHHHHHHHHhcChHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhhhhhcchhh
Q 025828 3 TPTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEE 82 (247)
Q Consensus 3 ~~~re~~~~~Aklaeq~ery~dm~~~mk~ii~~~~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~ieqk~~~~~~~~ 82 (247)
|.+|++++|+|||||||||||||+++||++++ ++ ++||.||||||||||||+||++|+|||+|++++||++.+|++.
T Consensus 28 m~~re~lv~~AKLaeqaeRYddMv~~MK~v~~--~~-~eLt~EERNLLSvAYKNvIgarR~swRiissieqkee~~g~~~ 104 (261)
T 3ubw_A 28 MDDREDLVYQAKLAEQAERYDEMVESMKKVAG--MD-VELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGGED 104 (261)
T ss_dssp --CHHHHHHHHHHHHHTTCHHHHHHHHHHHHT--TC-SCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHH
T ss_pred hhhHHHHHHHHHHHHHhccHHHHHHHHHHHHh--cC-CcCCHHHHHHHHHHHHhccCCchhHHHHHhHHHHhhhccccHH
Confidence 34799999999999999999999999999998 76 9999999999999999999999999999999999999888888
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhHHhhhccccccchhhcccchhHHHHHHHHHHHHHHHHH
Q 025828 83 HVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQD 162 (247)
Q Consensus 83 ~~~~i~~yk~ki~~EL~~~C~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~ 162 (247)
+++.+++||++|++||..+|++|+++||++|||.++++|++|||+|||||||||+|||..|++|+++++.|+++|++|++
T Consensus 105 ~~~~i~~yr~kIe~EL~~iC~dil~lld~~Lip~a~~~EskVFY~KMKGDYyRYlAE~~~g~~rk~~~e~a~~aY~~A~~ 184 (261)
T 3ubw_A 105 KLKMIREYRQMVETELKLICCDILDVLDKHLIPAANTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASD 184 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCcHHHHHHHHHhhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHHHhhcccCCCchHhHHHHHHHHHhhHhhhhcc
Q 025828 163 IALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSD 239 (247)
Q Consensus 163 ~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~a~~~ld~l~ee~~~d~~~ilqlLrdNl~~W~~e 239 (247)
+|+++||||||+|||||||||||||||+|+|++||.|||+|||+||+++|+|+||+|+|+|+||||||||||+|+++
T Consensus 185 iA~~~L~pThPirLGLaLNfSVFyYEIln~p~~Ac~LAk~AFd~Ai~eLd~L~eesykDstlImQLLRDNLtlWts~ 261 (261)
T 3ubw_A 185 IAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSD 261 (261)
T ss_dssp HHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHTGGGCCTTTHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhccChhhhHHHHHHHHHHHHHHHhhcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999974
No 4
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=100.00 E-value=2.1e-93 Score=624.43 Aligned_cols=233 Identities=70% Similarity=1.075 Sum_probs=226.2
Q ss_pred CCcHHhHHHHHHHHHHhcChHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhhhhhcchhh
Q 025828 3 TPTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEE 82 (247)
Q Consensus 3 ~~~re~~~~~Aklaeq~ery~dm~~~mk~ii~~~~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~ieqk~~~~~~~~ 82 (247)
|++|++++|+|||++|||||+||+++||++++ .+ ++||.||||||||||||+||++|+|||+|++++|+++++|++.
T Consensus 2 m~~re~~v~~AklaeqaeRyddm~~~mk~v~~--~~-~eLt~EERnLLsvayKnvig~rR~swRiissieqk~~~k~~~~ 78 (234)
T 2br9_A 2 MDDREDLVYQAKLAEQAERYDEMVESMKKVAG--MD-VELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGGED 78 (234)
T ss_dssp --CHHHHHHHHHHHHHHTCHHHHHHHHHHHHT--TC-SCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHH
T ss_pred cchHHHHHHHHHHHHHHhCHHHHHHHHHHHhc--cc-CCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhccCchH
Confidence 34799999999999999999999999999998 65 9999999999999999999999999999999999998888888
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhHHhhhccccccchhhcccchhHHHHHHHHHHHHHHHHH
Q 025828 83 HVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQD 162 (247)
Q Consensus 83 ~~~~i~~yk~ki~~EL~~~C~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~ 162 (247)
+++.+++||++|++||..+|++|+++||++|||.++++|++|||+|||||||||+|||..|++|++++++|+++|++|++
T Consensus 79 ~~~~i~~yr~kie~EL~~iC~~il~lld~~Lip~a~~~eskVFy~KmKGDyyRYlaE~~~g~~r~~~~e~a~~aY~~A~~ 158 (234)
T 2br9_A 79 KLKMIREYRQMVETELKLICCDILDVLDKHLIPAANTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASD 158 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhccCCCchHhHHHHHHHhccHHHHHHHHcCchHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHHHhhcccCCCchHhHHHHHHHHHhhHhhhhc
Q 025828 163 IALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTS 238 (247)
Q Consensus 163 ~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~a~~~ld~l~ee~~~d~~~ilqlLrdNl~~W~~ 238 (247)
+|+.+||||||+||||+||||||||||+|+|++||++||+|||+|++++|+++|++|+|+++||||||||||+|++
T Consensus 159 iA~~~L~pthPirLgLaLN~SVF~yEil~~~~~A~~lAk~afd~Ai~eld~l~eesykDstlImqLLrDNLtlWts 234 (234)
T 2br9_A 159 IAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTS 234 (234)
T ss_dssp HHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHTGGGCCTTTHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHccCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhhccChhhhHHHHHHHHHHHHHHHhhcC
Confidence 9998999999999999999999999999999999999999999999999999999999999999999999999985
No 5
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=100.00 E-value=1.5e-93 Score=632.69 Aligned_cols=240 Identities=76% Similarity=1.138 Sum_probs=222.2
Q ss_pred CcHHhHHHHHHHHHHhcChHHHHHHHHHHhhccCC-CCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhhhhhcchhh
Q 025828 4 PTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTP-ATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEE 82 (247)
Q Consensus 4 ~~re~~~~~Aklaeq~ery~dm~~~mk~ii~~~~~-~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~ieqk~~~~~~~~ 82 (247)
.+|++++|+|||++|||||+||+++||++++ ++ +++||.||||||||||||+||++|+|||+|++++|+++.+|++.
T Consensus 6 ~~re~~v~~AkLaeqaeRyddm~~~mk~v~~--~~~~~eLt~EERnLLSvaYKNvig~rR~swRiissieqke~~k~~~~ 83 (260)
T 1o9d_A 6 TAREENVYMAKLAEQAERYEEMVEFMEKVSN--SLGSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEE 83 (260)
T ss_dssp CHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH--TCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHH
T ss_pred ccHHHHHHHHHHHHHhcCHHHHHHHHHHHHc--cCCCCCCCHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHhhccCcHH
Confidence 4699999999999999999999999999998 52 17999999999999999999999999999999999998888888
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhHHhhhccccccchhhcccchhHHHHHHHHHHHHHHHHH
Q 025828 83 HVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQD 162 (247)
Q Consensus 83 ~~~~i~~yk~ki~~EL~~~C~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~ 162 (247)
+++.+++||++|++||..+|++|+++||++|||.++++|++|||+|||||||||+|||..|++|++++++|+++|++|++
T Consensus 84 ~~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~EskVFY~KMKGDYyRYlaE~~~g~~r~~~~e~a~~aY~~A~~ 163 (260)
T 1o9d_A 84 HVNSIREYRSKIENELSKICDGILKLLDAKLIPSAASGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQD 163 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCCCCCCchhHHHHHHHhccHHHHHHHhcCchHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHHHhhcccCCCchHhHHHHHHHHHhhHhhhhccccc
Q 025828 163 IALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQE 242 (247)
Q Consensus 163 ~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~a~~~ld~l~ee~~~d~~~ilqlLrdNl~~W~~e~~~ 242 (247)
+|+.+||||||+||||+||||||||||+|+|++||.|||+|||+|++++|+|+|++|+|+|+||||||||||+|+++.++
T Consensus 164 iA~~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd~Ai~eld~L~EesykDstlImqLLRDNLtlWts~~~~ 243 (260)
T 1o9d_A 164 IATTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQD 243 (260)
T ss_dssp HHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHTC-----CHHHHHHHHHHHHHHHTC----
T ss_pred HHHhcCCCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhhhccChhhhHHHHHHHHHHHHHHHHhhhccCc
Confidence 99989999999999999999999999999999999999999999999999999999999999999999999999988665
Q ss_pred ccc
Q 025828 243 QID 245 (247)
Q Consensus 243 ~~~ 245 (247)
+++
T Consensus 244 ~~~ 246 (260)
T 1o9d_A 244 DGA 246 (260)
T ss_dssp ---
T ss_pred ccc
Confidence 543
No 6
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=100.00 E-value=5.1e-92 Score=622.43 Aligned_cols=232 Identities=64% Similarity=1.009 Sum_probs=224.4
Q ss_pred cHHhHHHHHHHHHHhcChHHHHHHHHHHhhccCC--CCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhhhhhcchhh
Q 025828 5 TREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTP--ATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEE 82 (247)
Q Consensus 5 ~re~~~~~Aklaeq~ery~dm~~~mk~ii~~~~~--~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~ieqk~~~~~~~~ 82 (247)
+|++++|+|||++|||||+||+++||++++ .+ +++||.||||||||||||+||++|+|||+|++++|+++++|++.
T Consensus 27 ~re~~v~~AkLaeqaeRyddmv~~mk~v~~--~~~~~~eLt~EERnLLSvAyKNvIg~rR~swRiissieqke~~k~~~~ 104 (260)
T 2npm_A 27 ARESNVYMAKLAEQAERYDEMAKYMKDVVE--ARQESEELTVEERNLLSVAYKNAVGSRRSSWRIISSVEQKEHSRNAED 104 (260)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH--SCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHH
T ss_pred cHHHHHHHHHHHHHhcCHHHHHHHHHHHHh--ccCCCCCCCHHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhccCcHH
Confidence 599999999999999999999999999998 42 17999999999999999999999999999999999998888888
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhHHhhhccccccchhhcccchhHHHHHHHHHHHHHHHHH
Q 025828 83 HVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQD 162 (247)
Q Consensus 83 ~~~~i~~yk~ki~~EL~~~C~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~ 162 (247)
+++.+++||++|++||..+|++|+++||++|||.++++|++|||+|||||||||+|||..|++|++++++|+++|++|++
T Consensus 105 ~~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~EskVFY~KMKGDYyRYlaE~~~g~~r~~~~e~a~~aY~~A~~ 184 (260)
T 2npm_A 105 ASKMCGKYRSKVEAELTDICNDILTMLDKHLIPTATSPDSKVFYFKMKGDYHRYISEFSTGDSKQSSAEDALKAYKDATV 184 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHhhccCCCchHHHHHHHHHhccHHHHHHHhcCchHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHHHhhcccCCCchHhHHHHHHHHHhhHhhhhcc
Q 025828 163 IALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSD 239 (247)
Q Consensus 163 ~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~a~~~ld~l~ee~~~d~~~ilqlLrdNl~~W~~e 239 (247)
+| .+||||||+||||+||||||||||+|+|++||+|||+|||+|++++|+|+||+|+|+++||||||||||+|+++
T Consensus 185 iA-~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd~Ai~eld~L~eesykDstlImqLLRDNLtlWts~ 260 (260)
T 2npm_A 185 VA-KDLEPTHPIRLGLALNFSVFHYEILNEPRAAIDMAKEAFEMAIEQLDKLSEDCYKDSTLIMQLLRDNLTLWTAD 260 (260)
T ss_dssp HH-TTSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHTTGGGCCTTTHHHHHHHHHHHHHHHHHHTC-
T ss_pred HH-HhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhhcCChhhhHHHHHHHHHHHHHHHHhccC
Confidence 99 89999999999999999999999999999999999999999999999999999999999999999999999974
No 7
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=100.00 E-value=4.2e-89 Score=603.49 Aligned_cols=227 Identities=23% Similarity=0.426 Sum_probs=196.3
Q ss_pred cHHhHHHHHHHHHHhcChHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhhh-hhcch-hh
Q 025828 5 TREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKE-EGRKN-EE 82 (247)
Q Consensus 5 ~re~~~~~Aklaeq~ery~dm~~~mk~ii~~~~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~ieqk~-~~~~~-~~ 82 (247)
+|++++|+|||++||||||||+++| ++ ++ ++||.||||||||||||+||++|+|||+|++++||+ +.+|+ +.
T Consensus 28 ~r~~lv~~AKLaeqaeRYddMv~~M---~e--~~-~eLs~EERNLLSvAYKNvIgarR~swRiissieqke~e~kg~~~~ 101 (268)
T 3efz_A 28 KLSEGAYRAKLADMVGNYKDVIKVL---TE--SS-DFRDNSLILLLAGSLRNRVTSIRNSLKSIKSQEEKLRKEKSLNNE 101 (268)
T ss_dssp ------------------CHHHHHH---TC--------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
T ss_pred CHHHHHHHHHHHHHhccHHHHHHHH---Hh--cC-CcCCHHHHHHHHHHHHhhhccchHHHHHHHHHHHHhhhccCChHH
Confidence 5999999999999999999999999 66 65 999999999999999999999999999999999999 78887 88
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhHHhhhccccccchhhcccchhHHHHHHHHHHHHHHHHH
Q 025828 83 HVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQD 162 (247)
Q Consensus 83 ~~~~i~~yk~ki~~EL~~~C~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~ 162 (247)
+++.+++||++|++||..+|++|+++||++|||.++++ ++|||+|||||||||+|||..|++|++++++|+++|++|++
T Consensus 102 ~~~~i~~yr~kie~EL~~iC~diL~llD~~Lip~a~~~-skVFY~KMKGDYyRYlAE~~~g~erk~~~e~a~~aYq~A~e 180 (268)
T 3efz_A 102 FIQVIEDIKRDFEESILLESEDVIRIIDDNLLMYSEEG-ARAFCIKLKGDLMRYKAEILKDEEKNQCIKQAVEFYEDALQ 180 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGCCHH-HHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCch-hHHHHHhccchHHHHHHhhcCchHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHhhcC--CCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHHH---HHHhhcccCCCchHhHHHHHHHHHhhHhhhh
Q 025828 163 IALTDL--APTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEE---AIAELDTLGEESYKDSTLIMQLLRDNLTLWT 237 (247)
Q Consensus 163 ~a~~~L--~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~---a~~~ld~l~ee~~~d~~~ilqlLrdNl~~W~ 237 (247)
+|+++| |||||||||||||||||||||+|+|++||++||+|||+ ||+++|+++|++ |+||||||||||+|+
T Consensus 181 iA~~~L~~~pThPiRLGLaLNfSVFyYEIln~p~~Ac~lAk~AFde~~~AIaeld~L~ees----tlImQLLRDNLtlWt 256 (268)
T 3efz_A 181 RERSFLEKYPSDPLYLATILNYTILKYDLLGNPEGAMKFANRAIQAAENSRSDSEQFSENT----EKLLKILRDNVSQWE 256 (268)
T ss_dssp HHHHHCTTGGGCHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTCCC--CCCHHH----HHHHHHHHHHHHHHT
T ss_pred HHHHhcCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhHHHHHHHhccCChHH----HHHHHHHHHHHHHhh
Confidence 999899 99999999999999999999999999999999999999 999999999987 999999999999999
Q ss_pred ccccc
Q 025828 238 SDMQE 242 (247)
Q Consensus 238 ~e~~~ 242 (247)
++.++
T Consensus 257 sd~~~ 261 (268)
T 3efz_A 257 QGCSG 261 (268)
T ss_dssp TTCCT
T ss_pred ccccc
Confidence 98664
No 8
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=100.00 E-value=7e-81 Score=540.41 Aligned_cols=218 Identities=22% Similarity=0.273 Sum_probs=197.7
Q ss_pred cHHhHH---HHHHHHHHhcChHHHHHHHHHHhhcc-CCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhhhhhcch
Q 025828 5 TREQYV---YLAKLAEQAERYEEMVKFMDSLVTSS-TPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKN 80 (247)
Q Consensus 5 ~re~~~---~~Aklaeq~ery~dm~~~mk~ii~~~-~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~ieqk~~~~~~ 80 (247)
+|++++ |+|||++||||||||+++||++++.. ..+++||.||||||||||||+||++|+|||+|++++|++ +|+
T Consensus 2 ~re~~v~~~~~AKlaeqaeRyddM~~~mk~v~~~~~~~~~eLt~EERnLLSvAYKNvig~rR~swRiissiEqke--k~~ 79 (227)
T 2o8p_A 2 EMDERLLQKYRAQVFEWGGCFDKMFEALKSLIYLSEFENSEFDDEERHLLTLCIKHKISDYRTMTSQVLQEQTKQ--LNN 79 (227)
T ss_dssp -CCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--CSC
T ss_pred cHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHHH--cCC
Confidence 589999 99999999999999999999999710 013899999999999999999999999999999999998 677
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhHHhhhccccccchhhcccchhHHHHHHHHHHHHHHH
Q 025828 81 EEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAA 160 (247)
Q Consensus 81 ~~~~~~i~~yk~ki~~EL~~~C~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A 160 (247)
+.+++.+++||++|++||..+|++|+++||++|||.+ |++|||+|||||||||+|||..|+ +++|++||++|
T Consensus 80 ~~~~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a---EskVFY~KMKGDYyRYlAE~~~g~-----~e~a~~aY~~A 151 (227)
T 2o8p_A 80 DELVKICSEYVFSLRKDIKAFLQSFEDCVDRLVEKSF---FSKFFKLKVKSDISRYKLEFGLCS-----LEDSKKIHQDA 151 (227)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCSH---HHHHHHHHHHHHHHHHHHHTTSSC-----HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhccCcH---HHHHHHHHHhhhHHHHHHHHcccc-----HHHHHHHHHHH
Confidence 7889999999999999999999999999999999997 999999999999999999999998 89999999999
Q ss_pred HHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHHHH---HHhhcccCCCchHhHHHHHHHHHhhHh
Q 025828 161 QDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEA---IAELDTLGEESYKDSTLIMQLLRDNLT 234 (247)
Q Consensus 161 ~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~a---~~~ld~l~ee~~~d~~~ilqlLrdNl~ 234 (247)
+++|+++||||||+||||+||||||||||+|+|++||.+|++||+.+ +..-+.+ +.++++|+|+|+|||||.
T Consensus 152 ~~iA~~~L~pthPirLGLaLNfSVFyYEIln~p~~Ac~lAk~Afd~~~~~~~~~E~m--~~~~~~~~~~q~~~d~~~ 226 (227)
T 2o8p_A 152 FTLLCEHPDKIEQLPLGFIQNLAYILSEKYGEKKQVFNMLNSLGKILELQIKEQENM--DRKAQITVYLQGIKDYIE 226 (227)
T ss_dssp HHHHHHCGGGGGGSCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHCCCH--HHHHHHHHHHHHHC----
T ss_pred HHHHHhhCCCCChHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHhhccccc--hhHHHHHHHHHHHHHhcc
Confidence 99999899999999999999999999999999999999999999976 3333333 348889999999999984
No 9
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=95.85 E-value=0.46 Score=39.09 Aligned_cols=187 Identities=18% Similarity=0.170 Sum_probs=99.9
Q ss_pred HhHHHHHHHHHHhcChHHHHHHHHHHhhcc--C---CCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhh-hhh--c
Q 025828 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSS--T---PATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQK-EEG--R 78 (247)
Q Consensus 7 e~~~~~Aklaeq~ery~dm~~~mk~ii~~~--~---~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~ieqk-~~~--~ 78 (247)
+-+..++.+....|+|++++.+++++++.. . + .+....-...+..+|-. .+....|...+...... ... .
T Consensus 28 ~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~-~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~~~~~~~ 105 (311)
T 3nf1_A 28 RTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHD-HPDVATMLNILALVYRD-QNKYKDAANLLNDALAIREKTLGK 105 (311)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCSS-SHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHHhCC
Confidence 446678888889999999999999988521 0 1 11222223334443322 23334444443321111 000 0
Q ss_pred chhh----hhHHHHHHH-HHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhHHhhhccccccchhhcccchhHHHHHHHH
Q 025828 79 KNEE----HVSLVKDYR-SKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENT 153 (247)
Q Consensus 79 ~~~~----~~~~i~~yk-~ki~~EL~~~C~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a 153 (247)
.... ......-|. ..=-++-...+...+.+.....-+. ....+..+-..|..|... ++ .+.|
T Consensus 106 ~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~---~~~~~~~~~~la~~~~~~-----~~-----~~~A 172 (311)
T 3nf1_A 106 DHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKD---HPDVAKQLNNLALLCQNQ-----GK-----YEEV 172 (311)
T ss_dssp TCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTT---CHHHHHHHHHHHHHHHTT-----TC-----HHHH
T ss_pred CChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCC---ChHHHHHHHHHHHHHHHc-----CC-----HHHH
Confidence 0000 001111110 0001223334444444443322111 112222233344443222 11 4678
Q ss_pred HHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Q 025828 154 MLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIA 209 (247)
Q Consensus 154 ~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~a~~ 209 (247)
...|++|+.+++...++.+|.......+.+..++. +|+.++|+...++++..+-.
T Consensus 173 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~~~ 227 (311)
T 3nf1_A 173 EYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLK-QGKFKQAETLYKEILTRAHE 227 (311)
T ss_dssp HHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHH
Confidence 99999999999887888889888888888877776 69999999999999876543
No 10
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=95.05 E-value=1.1 Score=36.04 Aligned_cols=59 Identities=25% Similarity=0.284 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Q 025828 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIA 209 (247)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~a~~ 209 (247)
.+.|...|++|+.+++...++.+|.......+.+..++. +|+.++|+...++++..+-.
T Consensus 143 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~~l~~~~~ 201 (283)
T 3edt_B 143 AEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLK-QGKYQDAETLYKEILTRAHE 201 (283)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHH
Confidence 467899999999999888888899888888888877776 69999999999999876543
No 11
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=94.74 E-value=1 Score=34.47 Aligned_cols=163 Identities=13% Similarity=0.152 Sum_probs=84.5
Q ss_pred HhHHHHHHHHHHhcChHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhhhhhcchhhhhHH
Q 025828 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSL 86 (247)
Q Consensus 7 e~~~~~Aklaeq~ery~dm~~~mk~ii~~~~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~~ 86 (247)
.-...++.+..+-|+|++++++.+++++ .+ |. +.+=...+..+|-. .+....+...+............ .....
T Consensus 6 ~iy~~lG~~~~~~g~~~~A~~~~~~al~--~~-p~-~~~~~~~la~~~~~-~~~~~~a~~~~~~~~~~~~~~~~-~~~~~ 79 (184)
T 3vtx_A 6 TIYMDIGDKKRTKGDFDGAIRAYKKVLK--AD-PN-NVETLLKLGKTYMD-IGLPNDAIESLKKFVVLDTTSAE-AYYIL 79 (184)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHH--HC-TT-CHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCCCCHH-HHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHH--hC-CC-CHHHHHHHHHHHHH-CCCHHHHHHHHHHHHhcCchhHH-HHHHH
Confidence 4456789999999999999999999998 43 44 45556666666644 34444555554433222211100 00000
Q ss_pred HHHHHH-HHHHHHHHHHHHHHHHhhhccCCCCCCCchhhHHhhhccccccchhhcccchhHHHHHHHHHHHHHHHHHHHh
Q 025828 87 VKDYRS-KVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIAL 165 (247)
Q Consensus 87 i~~yk~-ki~~EL~~~C~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~ 165 (247)
...+.. .=-++-...+..++. +-|.. ..+ +...|..|.-+ ++ -+.|.+.|++|+++
T Consensus 80 ~~~~~~~~~~~~a~~~~~~a~~-----~~~~~----~~~--~~~lg~~~~~~-----g~-----~~~A~~~~~~~l~~-- 136 (184)
T 3vtx_A 80 GSANFMIDEKQAAIDALQRAIA-----LNTVY----ADA--YYKLGLVYDSM-----GE-----HDKAIEAYEKTISI-- 136 (184)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHH-----HCTTC----HHH--HHHHHHHHHHT-----TC-----HHHHHHHHHHHHHH--
T ss_pred HHHHHHcCCHHHHHHHHHHHHH-----hCccc----hHH--HHHHHHHHHHh-----CC-----chhHHHHHHHHHHh--
Confidence 000000 000111222222222 12321 112 22234443211 11 36788899998864
Q ss_pred hcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025828 166 TDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (247)
Q Consensus 166 ~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (247)
.|.+| ....|.+..|+. +|+.++|+..-++|++
T Consensus 137 ---~p~~~---~~~~~lg~~~~~-~g~~~~A~~~~~~al~ 169 (184)
T 3vtx_A 137 ---KPGFI---RAYQSIGLAYEG-KGLRDEAVKYFKKALE 169 (184)
T ss_dssp ---CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred ---cchhh---hHHHHHHHHHHH-CCCHHHHHHHHHHHHh
Confidence 34444 344555555554 8999999988777654
No 12
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=94.73 E-value=1.6 Score=36.63 Aligned_cols=58 Identities=10% Similarity=0.047 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Q 025828 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIA 209 (247)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~a~~ 209 (247)
-+.|...|++|+++++ .++..+|....+..|.+..|++ +|+.++|+...++|++-+..
T Consensus 171 ~~~A~~~~~~al~~~~-~~~~~~~~~~~~~~nlg~~y~~-~~~y~~A~~~~~~al~~~~~ 228 (293)
T 3u3w_A 171 LKKGIDLFEQILKQLE-ALHDNEEFDVKVRYNHAKALYL-DSRYEESLYQVNKAIEISCR 228 (293)
T ss_dssp HHHHHHHHHHHHHHHH-HSSCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-hcccchhHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHH
Confidence 3678999999999986 4666777777788999988887 79999999999999886643
No 13
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=94.63 E-value=0.41 Score=45.15 Aligned_cols=100 Identities=11% Similarity=0.081 Sum_probs=69.8
Q ss_pred HHHHHHHHHHHHHhhhccCCCCCCCchhhHHhhhccccccchhhcccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCcch
Q 025828 96 SELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIR 175 (247)
Q Consensus 96 ~EL~~~C~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~p~r 175 (247)
+|-..+|...+.+-...|=|... ...=-+.--|..|+..-. -+.|...|++|+++-+..|+|.||--
T Consensus 326 ~eA~~l~~~aL~~~~~~lg~~Hp---~~a~~~~nLa~~y~~~g~----------~~eA~~~~~~aL~i~~~~lG~~Hp~~ 392 (490)
T 3n71_A 326 HEVVKLCRECLEKQEPVFADTNL---YVLRLLSIASEVLSYLQA----------YEEASHYARRMVDGYMKLYHHNNAQL 392 (490)
T ss_dssp HHHHHHHHHHHHHHTTTBCTTSH---HHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHHHHHHHSCTTCHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCH---HHHHHHHHHHHHHHHhcC----------HHHHHHHHHHHHHHHHHHcCCCCHHH
Confidence 45566777888777666644431 111111122222222211 25689999999999999999999999
Q ss_pred hhHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Q 025828 176 LGLALNFSVFYYEILNSSEKACTMAKQAFEEAIA 209 (247)
Q Consensus 176 LgL~LN~SVF~yei~~~~~~A~~iak~afd~a~~ 209 (247)
+....|.++.|+. .|+.++|..+.++|++--..
T Consensus 393 a~~l~nLa~~~~~-~G~~~eA~~~~~~Al~i~~~ 425 (490)
T 3n71_A 393 GMAVMRAGLTNWH-AGHIEVGHGMICKAYAILLV 425 (490)
T ss_dssp HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHH
Confidence 9999999988887 69999999999998875544
No 14
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=93.49 E-value=0.88 Score=42.18 Aligned_cols=116 Identities=14% Similarity=0.061 Sum_probs=76.3
Q ss_pred HHHHHHHHHHHHHhhhccCCCCCCCchhhHHhhhccccccchhhcccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCcch
Q 025828 96 SELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIR 175 (247)
Q Consensus 96 ~EL~~~C~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~p~r 175 (247)
+|...+|...+.+-...|=|...+ ..=-+.--|.-|+.. | --+.|...|++|+++-+..++|.||--
T Consensus 315 ~eA~~~~~~~L~i~~~~lg~~Hp~---~a~~~~nLa~~y~~~-----g-----~~~eA~~~~~~aL~i~~~~lG~~Hp~~ 381 (433)
T 3qww_A 315 SELLEICELSQEKMSSVFEDSNVY---MLHMMYQAMGVCLYM-----Q-----DWEGALKYGQKIIKPYSKHYPVYSLNV 381 (433)
T ss_dssp HHHHHHHHHHHHHHTTTBCTTSHH---HHHHHHHHHHHHHHT-----T-----CHHHHHHHHHHHHHHHHHHSCSSCHHH
T ss_pred HHHHHHHHHHHHHhhCccChhchH---HHHHHHHHHHHHHhh-----c-----CHHHHHHHHHHHHHHHHHHcCCCChHH
Confidence 455677778887777666554311 111111122222111 1 025789999999999999999999999
Q ss_pred hhHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHHHhhcccCCCchHhHHHHHHHH
Q 025828 176 LGLALNFSVFYYEILNSSEKACTMAKQAFEEAIAELDTLGEESYKDSTLIMQLL 229 (247)
Q Consensus 176 LgL~LN~SVF~yei~~~~~~A~~iak~afd~a~~~ld~l~ee~~~d~~~ilqlL 229 (247)
.....|.++-|+. .|+.++|..+-++|++=-... +.++ .+++..+.+.|
T Consensus 382 a~~l~nLa~~~~~-qg~~~eA~~~~~~Al~i~~~~---lG~~-Hp~~~~l~~~l 430 (433)
T 3qww_A 382 ASMWLKLGRLYMG-LENKAAGEKALKKAIAIMEVA---HGKD-HPYISEIKQEI 430 (433)
T ss_dssp HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHH---TCTT-CHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-ccCHHHHHHHHHHHHHHHHHH---cCCC-ChHHHHHHHHH
Confidence 9988899888776 799999999999887755443 4443 34444444433
No 15
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=93.19 E-value=0.45 Score=43.95 Aligned_cols=58 Identities=12% Similarity=0.074 Sum_probs=51.6
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Q 025828 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIA 209 (247)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~a~~ 209 (247)
+.|...|++|+.+-+..++|.||.......|.++-|.. .|+.++|..+.++|++--..
T Consensus 346 ~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa~~~~~-~g~~~eA~~~~~~Al~i~~~ 403 (429)
T 3qwp_A 346 EEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGKLQLH-QGMFPQAMKNLRLAFDIMRV 403 (429)
T ss_dssp HHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHHHHHHh-cCCHHHHHHHHHHHHHHHHH
Confidence 67899999999999999999999999999999998877 79999999999988875544
No 16
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=92.33 E-value=1.1 Score=36.23 Aligned_cols=53 Identities=13% Similarity=0.048 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025828 152 NTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (247)
Q Consensus 152 ~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (247)
.|...|++|+++....-.+.++.......+.+.+| ...|+.++|+...++|+.
T Consensus 197 ~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~A~~~~~~al~ 249 (272)
T 3u4t_A 197 LAKPYYEKLIEVCAPGGAKYKDELIEANEYIAYYY-TINRDKVKADAAWKNILA 249 (272)
T ss_dssp TTHHHHHHHHHHHGGGGGGGHHHHHHHHHHHHHHH-HHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHH-HHcCCHHHHHHHHHHHHh
Confidence 47889999999885433322222223344445444 458999999988777664
No 17
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=92.16 E-value=0.81 Score=42.41 Aligned_cols=58 Identities=7% Similarity=-0.016 Sum_probs=50.4
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Q 025828 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIA 209 (247)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~a~~ 209 (247)
+.|...|++|+++.+..|.|.||..+...-|.+.-|.. +|+.++|..+.++|+.--..
T Consensus 315 ~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~-~g~~~eA~~~~~~aL~i~~~ 372 (433)
T 3qww_A 315 SELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLY-MQDWEGALKYGQKIIKPYSK 372 (433)
T ss_dssp HHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHh-hcCHHHHHHHHHHHHHHHHH
Confidence 56788999999999999999999999988888877776 79999999999999875544
No 18
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=92.02 E-value=0.77 Score=36.90 Aligned_cols=58 Identities=17% Similarity=0.074 Sum_probs=50.0
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHH
Q 025828 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAI 208 (247)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~a~ 208 (247)
.+.|...|++|+.+.+...+|.+|.......|.+..++. +|+.++|+...+++++-..
T Consensus 101 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~~ 158 (283)
T 3edt_B 101 YKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQN-QGKAEEVEYYYRRALEIYA 158 (283)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHT-TTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHH
Confidence 367899999999999888888899988888888887776 7999999999999988643
No 19
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=91.70 E-value=5.2 Score=33.43 Aligned_cols=56 Identities=11% Similarity=0.064 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHHHH
Q 025828 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEA 207 (247)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~a 207 (247)
-+.|...|++|+++++. .|........+..|.+..|+. +|+.++|+...++|++-+
T Consensus 171 ~~~A~~~~~kal~~~~~-~~~~~~~~~~~~~nlg~~y~~-~~~y~~Al~~~~kal~~~ 226 (293)
T 2qfc_A 171 LKKGIDLFEQILKQLEA-LHDNEEFDVKVRYNHAKALYL-DSRYEESLYQVNKAIEIS 226 (293)
T ss_dssp HHHHHHHHHHHHHHHHH-SCCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh-cCccccchHHHHHhHHHHHHH-HhhHHHHHHHHHHHHHHH
Confidence 36789999999999863 333222233566777777665 799999999999998765
No 20
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=91.49 E-value=1 Score=42.49 Aligned_cols=59 Identities=15% Similarity=0.042 Sum_probs=50.9
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHHHh
Q 025828 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIAE 210 (247)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~a~~~ 210 (247)
+.|...|++|+++.+..|.|.||-.+...-|.+..|.. +|+.++|..+.++|++--...
T Consensus 326 ~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~-~g~~~eA~~~~~~aL~i~~~~ 384 (490)
T 3n71_A 326 HEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSY-LQAYEEASHYARRMVDGYMKL 384 (490)
T ss_dssp HHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHHH
Confidence 35777899999999889999999999999999888876 799999999999998765443
No 21
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=91.06 E-value=7.6 Score=34.14 Aligned_cols=50 Identities=14% Similarity=0.090 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHH
Q 025828 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAF 204 (247)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~af 204 (247)
-++|.++|++|+++ .|.++..-.+.+++..|++..+|+.++|+..-++|+
T Consensus 350 ~~~A~~~~~kaL~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~Ai~~y~kal 399 (472)
T 4g1t_A 350 YEEAEYYFQKEFSK-----ELTPVAKQLLHLRYGNFQLYQMKCEDKAIHHFIEGV 399 (472)
T ss_dssp HHHHHHHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc-----CCCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 35789999999853 344455556678888888778999999988666554
No 22
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=90.52 E-value=6.3 Score=32.29 Aligned_cols=46 Identities=11% Similarity=0.079 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHH
Q 025828 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAF 204 (247)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~af 204 (247)
.+.|...|++|+++. |.+| ....+.+..++ .+|+.++|+...++++
T Consensus 252 ~~~A~~~~~~a~~~~-----~~~~---~~~~~la~~~~-~~g~~~~A~~~~~~al 297 (330)
T 3hym_B 252 YAEALDYHRQALVLI-----PQNA---STYSAIGYIHS-LMGNFENAVDYFHTAL 297 (330)
T ss_dssp HHHHHHHHHHHHHHS-----TTCS---HHHHHHHHHHH-HHTCHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHhhC-----ccch---HHHHHHHHHHH-HhccHHHHHHHHHHHH
Confidence 466888999998753 3333 23444555554 4799999988776654
No 23
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=90.40 E-value=10 Score=34.53 Aligned_cols=173 Identities=16% Similarity=0.137 Sum_probs=90.3
Q ss_pred HhHHHHHHHHHHhcCh-HHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhhhhhcchhhhhH
Q 025828 7 EQYVYLAKLAEQAERY-EEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVS 85 (247)
Q Consensus 7 e~~~~~Aklaeq~ery-~dm~~~mk~ii~~~~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~ 85 (247)
+-+..++++....|+| ++++.++++.++ .+ | -+.+=...+..+|-.. +....|...+....+.... ......
T Consensus 103 ~~~~~lg~~~~~~g~~~~~A~~~~~~al~--~~-p-~~~~a~~~lg~~~~~~-g~~~~A~~~~~~al~~~p~--~~~~~~ 175 (474)
T 4abn_A 103 QALMLKGKALNVTPDYSPEAEVLLSKAVK--LE-P-ELVEAWNQLGEVYWKK-GDVTSAHTCFSGALTHCKN--KVSLQN 175 (474)
T ss_dssp HHHHHHHHHHTSSSSCCHHHHHHHHHHHH--HC-T-TCHHHHHHHHHHHHHH-TCHHHHHHHHHHHHTTCCC--HHHHHH
T ss_pred HHHHHHHHHHHhccccHHHHHHHHHHHHh--hC-C-CCHHHHHHHHHHHHHc-CCHHHHHHHHHHHHhhCCC--HHHHHH
Confidence 4456677777777888 888888888776 32 3 3455566666666443 4455555554432222111 011111
Q ss_pred HHHHHHH----------HHHHHHHHHHHHHHHHhhhccCCCCCCCchhhHHhhhccccccchhhcccchhHHHHHHHHHH
Q 025828 86 LVKDYRS----------KVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTML 155 (247)
Q Consensus 86 ~i~~yk~----------ki~~EL~~~C~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~ 155 (247)
+..-|.. .=-++-...++..+.+ -|.. ..++ -..|..|.... |..+. ...-.+.|..
T Consensus 176 lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~-----~p~~----~~~~--~~lg~~~~~~~-~~~~~-~~g~~~~A~~ 242 (474)
T 4abn_A 176 LSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQM-----DVLD----GRSW--YILGNAYLSLY-FNTGQ-NPKISQQALS 242 (474)
T ss_dssp HHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHH-----CTTC----HHHH--HHHHHHHHHHH-HHTTC-CHHHHHHHHH
T ss_pred HHHHHHHhccCChhhhhhhHHHHHHHHHHHHHh-----CCCC----HHHH--HHHHHHHHHHH-Hhhcc-ccchHHHHHH
Confidence 1111111 1112334444455443 2321 2222 23444443320 11121 1123677899
Q ss_pred HHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025828 156 SYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (247)
Q Consensus 156 aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (247)
+|++|+.+ .|.+|-......|.+..|+. +|+.++|+...++|+.
T Consensus 243 ~~~~al~~-----~p~~~~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~ 286 (474)
T 4abn_A 243 AYAQAEKV-----DRKASSNPDLHLNRATLHKY-EESYGEALEGFSQAAA 286 (474)
T ss_dssp HHHHHHHH-----CGGGGGCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHh-----CCCcccCHHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 99999876 23222555667777777776 7999999987777654
No 24
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=90.19 E-value=9.7 Score=33.88 Aligned_cols=49 Identities=8% Similarity=0.100 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHHHH
Q 025828 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEA 207 (247)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~a 207 (247)
.+.|...|++|+++ .|.+| ....+.+..|+ -+|+.++|+...+++++-.
T Consensus 444 ~~~A~~~~~~a~~~-----~p~~~---~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~ 492 (537)
T 3fp2_A 444 FNAAIKLLTKACEL-----DPRSE---QAKIGLAQLKL-QMEKIDEAIELFEDSAILA 492 (537)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHH-HhccHHHHHHHHHHHHHhC
Confidence 46778888888764 44554 34455555555 4799999999888877644
No 25
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=89.23 E-value=2.6 Score=36.61 Aligned_cols=72 Identities=18% Similarity=0.195 Sum_probs=47.2
Q ss_pred hhhHHhhhccccccchhhcccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCcchhhHh-hhHHHHHHHHhCCHHHHHHHH
Q 025828 122 SKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLA-LNFSVFYYEILNSSEKACTMA 200 (247)
Q Consensus 122 skvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~p~rLgL~-LN~SVF~yei~~~~~~A~~ia 200 (247)
...+|+-.+|.+|...-. -+.|...|++|+.+++. . | +|...+.+ .+.+..|+. +|+.++|+...
T Consensus 101 l~~~~~~~~g~~~~~~g~----------~~~A~~~~~~al~~~~~-~-~-~~~~~a~~~~~lg~~~~~-~~~~~~A~~~~ 166 (383)
T 3ulq_A 101 LEYYFNFFRGMYELDQRE----------YLSAIKFFKKAESKLIF-V-K-DRIEKAEFFFKMSESYYY-MKQTYFSMDYA 166 (383)
T ss_dssp HHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHTTGGG-C-C-CHHHHHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcC----------HHHHHHHHHHHHHHHhh-C-C-CHHHHHHHHHHHHHHHHH-cCCHHHHHHHH
Confidence 344555567776643322 46789999999988753 3 2 34444444 444555554 89999999999
Q ss_pred HHHHHHH
Q 025828 201 KQAFEEA 207 (247)
Q Consensus 201 k~afd~a 207 (247)
++|++-.
T Consensus 167 ~~al~~~ 173 (383)
T 3ulq_A 167 RQAYEIY 173 (383)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8887754
No 26
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=88.92 E-value=1.2 Score=40.97 Aligned_cols=58 Identities=14% Similarity=-0.012 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Q 025828 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIA 209 (247)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~a~~ 209 (247)
+.|...|++|+++.+..|+|.||..+...-|.+.-|.. +|+.++|..+.++++.--..
T Consensus 304 ~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~-~g~~~eA~~~~~~~L~i~~~ 361 (429)
T 3qwp_A 304 EQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACIN-LGLLEEALFYGTRTMEPYRI 361 (429)
T ss_dssp HHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHhHHH
Confidence 45677778887777778999999999999888877766 79999999999998775544
No 27
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=88.84 E-value=7.4 Score=30.69 Aligned_cols=60 Identities=13% Similarity=0.022 Sum_probs=42.3
Q ss_pred HhHHHHHHHHHHhcChHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHH
Q 025828 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISS 70 (247)
Q Consensus 7 e~~~~~Aklaeq~ery~dm~~~mk~ii~~~~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~ 70 (247)
+.+..++.+.-+.|+|++++.++.++++ .. |.-+..-...+..+|-. .+....|...+..
T Consensus 8 ~~~~~~g~~~~~~~~~~~A~~~~~~al~--~~-~~~~~~~~~~~~~~~~~-~~~~~~A~~~~~~ 67 (228)
T 4i17_A 8 NQLKNEGNDALNAKNYAVAFEKYSEYLK--LT-NNQDSVTAYNCGVCADN-IKKYKEAADYFDI 67 (228)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH--HT-TTCCHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHh--cc-CCCCcHHHHHHHHHHHH-hhcHHHHHHHHHH
Confidence 6778899999999999999999999997 43 53455544445555543 4555666666543
No 28
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=88.80 E-value=11 Score=32.51 Aligned_cols=176 Identities=10% Similarity=0.021 Sum_probs=87.4
Q ss_pred HHHHHHHHhcChHHHHHHHHHHhhccCCCCCCCH-----HHHHHHHHHHhhhhhhhhhHHHHHHHHhhhhhhcch-hhhh
Q 025828 11 YLAKLAEQAERYEEMVKFMDSLVTSSTPATELTV-----EERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKN-EEHV 84 (247)
Q Consensus 11 ~~Aklaeq~ery~dm~~~mk~ii~~~~~~~~L~~-----eERnLls~ayKn~i~~~R~s~R~l~~ieqk~~~~~~-~~~~ 84 (247)
+++.+....|+|++++.+.++.++ .- ..... +=...++.+|-. .+..-.|...+.....--+..++ ....
T Consensus 108 ~~g~~~~~~g~~~~A~~~~~~al~--~~-~~~~~~~~~a~~~~~lg~~~~~-~~~~~~A~~~~~~al~~~~~~~~~~~~~ 183 (383)
T 3ulq_A 108 FRGMYELDQREYLSAIKFFKKAES--KL-IFVKDRIEKAEFFFKMSESYYY-MKQTYFSMDYARQAYEIYKEHEAYNIRL 183 (383)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHT--TG-GGCCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHTCSTTHHHH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHH--HH-hhCCCHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHhCccchHHH
Confidence 378888899999999999999886 31 22221 223334444433 23333343333221111000010 0000
Q ss_pred -H----HHHHHH-HHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhHHhhhccccccchhhcccchhHHHHHHHHHHHHH
Q 025828 85 -S----LVKDYR-SKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYK 158 (247)
Q Consensus 85 -~----~i~~yk-~ki~~EL~~~C~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~ 158 (247)
. +-.-|. ..=-++-...+...+.+.... .+.......+.-.|..|..+-. -+.|...|+
T Consensus 184 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~lg~~y~~~g~----------~~~A~~~~~ 248 (383)
T 3ulq_A 184 LQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAE-----KQPQLMGRTLYNIGLCKNSQSQ----------YEDAIPYFK 248 (383)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT-----TCHHHHHHHHHHHHHHHHHTTC----------HHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHc-----CChHHHHHHHHHHHHHHHHCCC----------HHHHHHHHH
Confidence 0 000000 000122233444444444322 1122222222334555433211 467899999
Q ss_pred HHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHH
Q 025828 159 AAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAI 208 (247)
Q Consensus 159 ~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~a~ 208 (247)
+|+++++..-. .|.......|.+..++. +|+.++|+...++|+.-+-
T Consensus 249 ~al~~~~~~~~--~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~~~ 295 (383)
T 3ulq_A 249 RAIAVFEESNI--LPSLPQAYFLITQIHYK-LGKIDKAHEYHSKGMAYSQ 295 (383)
T ss_dssp HHHHHHHHTTC--GGGHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhcc--chhHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHH
Confidence 99999875333 13334445555655554 7999999999998887653
No 29
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=88.56 E-value=10 Score=31.84 Aligned_cols=59 Identities=17% Similarity=0.217 Sum_probs=36.3
Q ss_pred HhHHHHHHHHHHhcChHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHH
Q 025828 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISS 70 (247)
Q Consensus 7 e~~~~~Aklaeq~ery~dm~~~mk~ii~~~~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~ 70 (247)
.-+..++.+....|+|++++.+++++++ .. |. +.+=...+..+|-. .+....+...+..
T Consensus 99 ~~~~~l~~~~~~~g~~~~A~~~~~~al~--~~-~~-~~~~~~~l~~~~~~-~g~~~~A~~~~~~ 157 (368)
T 1fch_A 99 EAWQYLGTTQAENEQELLAISALRRCLE--LK-PD-NQTALMALAVSFTN-ESLQRQACEILRD 157 (368)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH--HC-TT-CHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCcCHHHHHHHHHHHHh--cC-CC-CHHHHHHHHHHHHH-cCCHHHHHHHHHH
Confidence 4456677777788888888888888876 32 33 44555555555543 3444555555543
No 30
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=88.56 E-value=8.7 Score=31.12 Aligned_cols=27 Identities=11% Similarity=0.314 Sum_probs=23.2
Q ss_pred hHHHHHHHHHHhcChHHHHHHHHHHhh
Q 025828 8 QYVYLAKLAEQAERYEEMVKFMDSLVT 34 (247)
Q Consensus 8 ~~~~~Aklaeq~ery~dm~~~mk~ii~ 34 (247)
-+..++.+....|+|++++.++++.+.
T Consensus 71 ~~~~la~~~~~~g~~~~A~~~~~~al~ 97 (311)
T 3nf1_A 71 MLNILALVYRDQNKYKDAANLLNDALA 97 (311)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 355788888889999999999999886
No 31
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=88.32 E-value=9 Score=31.02 Aligned_cols=189 Identities=13% Similarity=0.026 Sum_probs=96.0
Q ss_pred HhHHHHHHHHHHhcChHHHHHHHHHHhhccCCCCCCCHHH----HHHHHHHHhhhhhhhhhHHHHHHHHhhhhhhcchhh
Q 025828 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEE----RNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEE 82 (247)
Q Consensus 7 e~~~~~Aklaeq~ery~dm~~~mk~ii~~~~~~~~L~~eE----RnLls~ayKn~i~~~R~s~R~l~~ieqk~~~~~~~~ 82 (247)
..+...+....+.|+|++++.++++.++ .. +. +.+. ...+..+|-. .+....+...+.....-....++..
T Consensus 6 ~~l~~~g~~~~~~g~~~~A~~~~~~al~--~~-~~-~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~ 80 (338)
T 3ro2_A 6 LELALEGERLCKSGDCRAGVSFFEAAVQ--VG-TE-DLKTLSAIYSQLGNAYFY-LHDYAKALEYHHHDLTLARTIGDQL 80 (338)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH--HC-CS-CHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHh--hC-cc-cHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHhhcccccH
Confidence 5677889999999999999999999997 32 33 3221 2233333332 2334444444432211110001100
Q ss_pred -----hhHHHHHH-HHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhHHhhhccccccchhhcc----------cchhH
Q 025828 83 -----HVSLVKDY-RSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFK----------VGDER 146 (247)
Q Consensus 83 -----~~~~i~~y-k~ki~~EL~~~C~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~----------~~~~~ 146 (247)
......-| ...=-++-...+...+.+.... .+....+..+...|..|...-... ...+-
T Consensus 81 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a 155 (338)
T 3ro2_A 81 GEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISREL-----NDKVGEARALYNLGNVYHAKGKSFGCPGPQDTGEFPEDV 155 (338)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT-----TCHHHHHHHHHHHHHHHHHHHHTSSSSSCC----CCHHH
T ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHh-----cCchHHHHHHHHHHHHHHHcCcccccchhhhhhhhhhhH
Confidence 00001111 0001123344445555544332 222233444445666665544411 01222
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHH
Q 025828 147 KAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAI 208 (247)
Q Consensus 147 ~~~~~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~a~ 208 (247)
....+.|...|++|+.++... +.+|.......+.+..++ -.|+.++|+...+++++-+-
T Consensus 156 ~~~~~~A~~~~~~a~~~~~~~--~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~a~~~~~ 214 (338)
T 3ro2_A 156 RNALQAAVDLYEENLSLVTAL--GDRAAQGRAFGNLGNTHY-LLGNFRDAVIAHEQRLLIAK 214 (338)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhc--CCHHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHHH
Confidence 344677888888888887542 223333334444444444 47999999998888876543
No 32
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=88.19 E-value=1.4 Score=32.50 Aligned_cols=48 Identities=19% Similarity=0.309 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHHH
Q 025828 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEE 206 (247)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~ 206 (247)
-+.|.++|++|+++ .|.+| ....|.+..|+. +|+.++|+...++|+.-
T Consensus 24 ~~~A~~~y~~Al~~-----~p~~~---~~~~nlg~~~~~-~~~~~~A~~~~~~al~~ 71 (127)
T 4gcn_A 24 FEKAHVHYDKAIEL-----DPSNI---TFYNNKAAVYFE-EKKFAECVQFCEKAVEV 71 (127)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----CCCCH---HHHHhHHHHHHH-hhhHHHHHHHHHHHHHh
Confidence 36789999999875 45554 345677777776 79999999998888764
No 33
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=87.97 E-value=1.8 Score=37.71 Aligned_cols=74 Identities=15% Similarity=0.135 Sum_probs=49.6
Q ss_pred hhhHHhhhccccccchhhcccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHH
Q 025828 122 SKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAK 201 (247)
Q Consensus 122 skvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak 201 (247)
...+|+-.+|.+|...-. -+.|...|++|+.++.. ++ .+|..-....|.+.+|+. +|+.++|+...+
T Consensus 99 l~~~~~~~~g~~~~~~g~----------~~~A~~~~~~al~~~~~-~~-~~~~~a~~~~~lg~~y~~-~~~~~~A~~~~~ 165 (378)
T 3q15_A 99 LKYYSLFFRGMYEFDQKE----------YVEAIGYYREAEKELPF-VS-DDIEKAEFHFKVAEAYYH-MKQTHVSMYHIL 165 (378)
T ss_dssp HHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHTTGGG-CC-CHHHHHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCC----------HHHHHHHHHHHHHHHhh-CC-ChHHHHHHHHHHHHHHHH-cCCcHHHHHHHH
Confidence 444556667776543322 36689999999988853 32 334444455555666665 799999999999
Q ss_pred HHHHHHH
Q 025828 202 QAFEEAI 208 (247)
Q Consensus 202 ~afd~a~ 208 (247)
+|++-.-
T Consensus 166 ~al~~~~ 172 (378)
T 3q15_A 166 QALDIYQ 172 (378)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9887553
No 34
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=87.47 E-value=13 Score=32.08 Aligned_cols=57 Identities=14% Similarity=-0.042 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHH
Q 025828 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAI 208 (247)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~a~ 208 (247)
-++|...|++|..++.. .+ ..|.-.|...+...-+|...++..+|+..-.++|+..-
T Consensus 191 ~~~A~~~~~~al~~~~~-~~-~~~~~~~~~~~~~g~~~~~~~~y~~A~~~~~~a~~~~~ 247 (434)
T 4b4t_Q 191 LAKSKASLTAARTAANS-IY-CPTQTVAELDLMSGILHCEDKDYKTAFSYFFESFESYH 247 (434)
T ss_dssp HHHHHHHHHHHHHHHHH-SC-CCHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhc-CC-CchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhh
Confidence 36789999999998853 33 22344466666666777778999999998888887643
No 35
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=87.32 E-value=9.8 Score=30.32 Aligned_cols=59 Identities=12% Similarity=0.112 Sum_probs=36.4
Q ss_pred HhHHHHHHHHHHhcChHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHH
Q 025828 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISS 70 (247)
Q Consensus 7 e~~~~~Aklaeq~ery~dm~~~mk~ii~~~~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~ 70 (247)
+-+..++.+..+.|+|++++..+.++++ .+ | =+.+=...+..+|-. .+....+...+..
T Consensus 6 ~~~~~lg~~~~~~g~~~~A~~~~~~al~--~~-p-~~~~a~~~lg~~~~~-~g~~~~A~~~~~~ 64 (217)
T 2pl2_A 6 QNPLRLGVQLYALGRYDAALTLFERALK--EN-P-QDPEALYWLARTQLK-LGLVNPALENGKT 64 (217)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHT--TS-S-SCHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHH--hC-C-CCHHHHHHHHHHHHH-cCCHHHHHHHHHH
Confidence 4556777777788888888888888876 32 3 345555555555533 3444455555543
No 36
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=86.98 E-value=14 Score=31.67 Aligned_cols=189 Identities=16% Similarity=0.085 Sum_probs=95.8
Q ss_pred HhHHHHHHHHHHhcChHHHHHHHHHHhhccCCCCCCCHH----HHHHHHHHHhhhhhhhhhHHHHHHHHhhhhhhcch-h
Q 025828 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVE----ERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKN-E 81 (247)
Q Consensus 7 e~~~~~Aklaeq~ery~dm~~~mk~ii~~~~~~~~L~~e----ERnLls~ayKn~i~~~R~s~R~l~~ieqk~~~~~~-~ 81 (247)
..+..++....+.|+|++++.++.++++ .. +. +.. =...+..+|-. .+....+...+....+.-...++ .
T Consensus 49 ~~l~~~g~~~~~~g~~~~A~~~~~~al~--~~-~~-~~~~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~ 123 (411)
T 4a1s_A 49 LELALEGERLCNAGDCRAGVAFFQAAIQ--AG-TE-DLRTLSAIYSQLGNAYFY-LGDYNKAMQYHKHDLTLAKSMNDRL 123 (411)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH--HC-CS-CHHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHHHH--hc-cc-ChhHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHccCch
Confidence 4566788888899999999999999997 33 43 332 23344444432 34445555544332211100010 0
Q ss_pred hh----hHHHHHH-HHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhHHhhhccccccchhhc------c-cchhHHHH
Q 025828 82 EH----VSLVKDY-RSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEF------K-VGDERKAA 149 (247)
Q Consensus 82 ~~----~~~i~~y-k~ki~~EL~~~C~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~------~-~~~~~~~~ 149 (247)
.. .....-| ...=-++-...+..++.+.... .+.......+...|..|...-.. . ...+-...
T Consensus 124 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~ 198 (411)
T 4a1s_A 124 GEAKSSGNLGNTLKVMGRFDEAAICCERHLTLARQL-----GDRLSEGRALYNLGNVYHAKGKHLGQRNPGKFGDDVKEA 198 (411)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHh-----hchHHHHHHHHHHHHHHHHcCcccccccchhhhhhhhHH
Confidence 00 0000000 0001123344445555544332 11122233333445554443330 0 01122344
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHH
Q 025828 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAI 208 (247)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~a~ 208 (247)
.+.|...|++|++++... +.+|.......+.+..++ -.|+.++|+...++|+.-.-
T Consensus 199 ~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~~ 254 (411)
T 4a1s_A 199 LTRAVEFYQENLKLMRDL--GDRGAQGRACGNLGNTYY-LLGDFQAAIEHHQERLRIAR 254 (411)
T ss_dssp HHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHc--CCHHHHHHHHHHHHHHHH-HcCChHHHHHHHHHHHHHHH
Confidence 678899999999888643 233444444455555544 48999999999888877554
No 37
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=86.62 E-value=15 Score=31.78 Aligned_cols=47 Identities=13% Similarity=0.078 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025828 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (247)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (247)
.+.|...|++|+.+ .|.+| ....+.+..+. ..|+.++|+...++++.
T Consensus 311 ~~~A~~~~~~a~~~-----~p~~~---~~~~~l~~~~~-~~~~~~~A~~~~~~al~ 357 (450)
T 2y4t_A 311 PVEAIRVCSEVLQM-----EPDNV---NALKDRAEAYL-IEEMYDEAIQDYETAQE 357 (450)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHh-----CcccH---HHHHHHHHHHH-HhcCHHHHHHHHHHHHH
Confidence 45678888888764 34444 33444555444 57999999998888764
No 38
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=86.25 E-value=15 Score=31.55 Aligned_cols=53 Identities=8% Similarity=0.170 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHHH
Q 025828 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEE 206 (247)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~ 206 (247)
-+.|...|++|+++++..- +|.......|.+..++. +|+.++|+...++|+.-
T Consensus 238 ~~~A~~~~~~al~~~~~~~---~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~ 290 (378)
T 3q15_A 238 DQMAVEHFQKAAKVSREKV---PDLLPKVLFGLSWTLCK-AGQTQKAFQFIEEGLDH 290 (378)
T ss_dssp HHHHHHHHHHHHHHHHHHC---GGGHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhC---ChhHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHH
Confidence 4678999999999987543 34444445555655554 79999999988877664
No 39
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=85.95 E-value=15 Score=31.03 Aligned_cols=27 Identities=7% Similarity=-0.017 Sum_probs=17.0
Q ss_pred hHHHHHHHHHHhcChHHHHHHHHHHhh
Q 025828 8 QYVYLAKLAEQAERYEEMVKFMDSLVT 34 (247)
Q Consensus 8 ~~~~~Aklaeq~ery~dm~~~mk~ii~ 34 (247)
.++.++....+.|+|++++.+++++++
T Consensus 67 ~~~~~~~~~~~~g~~~~A~~~~~~al~ 93 (365)
T 4eqf_A 67 GAFEEGLKRLKEGDLPVTILFMEAAIL 93 (365)
T ss_dssp THHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 355666666666666666666666665
No 40
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=85.69 E-value=7.8 Score=27.61 Aligned_cols=55 Identities=15% Similarity=0.025 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHHHH
Q 025828 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEA 207 (247)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~a 207 (247)
-+.|...|++|+.++... + .+|.......+.+..++ -.|+.++|+...++|++-+
T Consensus 105 ~~~A~~~~~~a~~~~~~~-~-~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~a~~~~ 159 (164)
T 3ro3_A 105 YEKAIDYHLKHLAIAQEL-K-DRIGEGRACWSLGNAYT-ALGNHDQAMHFAEKHLEIS 159 (164)
T ss_dssp HHHHHHHHHHHHHHHHHT-T-CHHHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHc-c-chHhHHHHHHHHHHHHH-HccCHHHHHHHHHHHHHHH
Confidence 456889999999988642 2 22333334445555444 5799999999888877654
No 41
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=85.64 E-value=18 Score=31.72 Aligned_cols=55 Identities=16% Similarity=0.047 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHHHHhhcC--CCCC----cchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025828 150 AENTMLSYKAAQDIALTDL--APTH----PIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (247)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L--~pt~----p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (247)
.+.|...|++++..-...+ .|.+ |.......+.+..++. .|+.++|+...++++.
T Consensus 205 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~A~~~~~~~l~ 265 (514)
T 2gw1_A 205 YDKADESFTKAARLFEEQLDKNNEDEKLKEKLAISLEHTGIFKFL-KNDPLGAHEDIKKAIE 265 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSTTCHHHHHHHHHHHHHHHHHHHH-SSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhhhccCccccccChHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHh
Confidence 5677888888887443333 4444 5555566666666665 7999999998888765
No 42
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=84.57 E-value=17 Score=30.60 Aligned_cols=55 Identities=16% Similarity=0.080 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHHHH
Q 025828 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEA 207 (247)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~a 207 (247)
.+.|...|++|+.++.. . +.++.......|.+..+ ..+|+.++|+...++|++-+
T Consensus 203 ~~~A~~~~~~al~~~~~-~-~~~~~~~~~~~~la~~~-~~~g~~~~A~~~~~~al~~~ 257 (406)
T 3sf4_A 203 FRDAVIAHEQRLLIAKE-F-GDKAAERRAYSNLGNAY-IFLGEFETASEYYKKTLLLA 257 (406)
T ss_dssp HHHHHHHHHHHHHHHHH-T-TCHHHHHHHHHHHHHHH-HHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh-c-CCcHHHHHHHHHHHHHH-HHcCChHHHHHHHHHHHHHH
Confidence 35678888888888764 2 22222222334444444 44799999988888877654
No 43
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=83.42 E-value=1.8 Score=32.69 Aligned_cols=55 Identities=16% Similarity=0.199 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHHHHhhcC---CCC-------CcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025828 150 AENTMLSYKAAQDIALTDL---APT-------HPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (247)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L---~pt-------~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (247)
-+.|...|++|+.+..... .|+ +|....+..|.+..|+. +|+.++|+..+.+|+.
T Consensus 27 ~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~~~~~~A~~~~~~al~ 91 (162)
T 3rkv_A 27 YKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLN-IGDLHEAEETSSEVLK 91 (162)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHh-cCcHHHHHHHHHHHHh
Confidence 3678999999999864321 233 67777888888888776 7999999998888754
No 44
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=83.35 E-value=21 Score=30.77 Aligned_cols=168 Identities=13% Similarity=0.099 Sum_probs=85.1
Q ss_pred HHHHHHHHHhcChHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhhhhhcchhhhhHHHHH
Q 025828 10 VYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKD 89 (247)
Q Consensus 10 ~~~Aklaeq~ery~dm~~~mk~ii~~~~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~~i~~ 89 (247)
..+|.+..+.|+|++++.++.++++ . .+-+..-...+..+|-. .+....+...+....+...... ........-
T Consensus 147 ~~~a~~~~~~~~~~~A~~~~~~~~~--~--~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~~~~~~~~~~-~~~~~l~~~ 220 (450)
T 2y4t_A 147 RSQALNAFGSGDYTAAIAFLDKILE--V--CVWDAELRELRAECFIK-EGEPRKAISDLKAASKLKNDNT-EAFYKISTL 220 (450)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHH--H--CTTCHHHHHHHHHHHHH-TTCGGGGHHHHHHHHHHHCSCH-HHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHH--h--CCCChHHHHHHHHHHHH-CCCHHHHHHHHHHHHHhCCCCH-HHHHHHHHH
Confidence 3457778889999999999999997 3 23455556666666643 3555566666654333221110 011111111
Q ss_pred HHH-HHHHHHHHHHHHHHHHhhhccCCCCCCCchhhHHhhh--------ccccccchhhcccchhHHHHHHHHHHHHHHH
Q 025828 90 YRS-KVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKM--------KGDYYRYLAEFKVGDERKAAAENTMLSYKAA 160 (247)
Q Consensus 90 yk~-ki~~EL~~~C~eii~lid~~Lip~~~~~eskvfy~Km--------kgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A 160 (247)
|.. .=-++-......++.+ -|.. ......+..+ .|+.|. +..-.+.|...|++|
T Consensus 221 ~~~~g~~~~A~~~~~~~~~~-----~p~~--~~~~~~~~~~~~~~~~~~~~~~~~----------~~g~~~~A~~~~~~~ 283 (450)
T 2y4t_A 221 YYQLGDHELSLSEVRECLKL-----DQDH--KRCFAHYKQVKKLNKLIESAEELI----------RDGRYTDATSKYESV 283 (450)
T ss_dssp HHHTTCHHHHHHHHHHHHHH-----CTTC--HHHHHHHHHHHHHHHHHHHHHHHH----------HHTCHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHh-----CCCh--HHHHHHHHHHHHHHHHHHHHHHHH----------HcCCHHHHHHHHHHH
Confidence 111 0011222223333321 2321 1111111000 022111 111246688888888
Q ss_pred HHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025828 161 QDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (247)
Q Consensus 161 ~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (247)
+. +.|.+|....-++..-+-.|.-+|+.++|+...++++.
T Consensus 284 l~-----~~p~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~ 323 (450)
T 2y4t_A 284 MK-----TEPSIAEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQ 323 (450)
T ss_dssp HH-----HCCSSHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred Hh-----cCCcchHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 76 34667765444444444445568999999999888764
No 45
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=82.53 E-value=16 Score=28.75 Aligned_cols=59 Identities=12% Similarity=0.061 Sum_probs=39.3
Q ss_pred HhHHHHHHHHHHhcChHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHH
Q 025828 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISS 70 (247)
Q Consensus 7 e~~~~~Aklaeq~ery~dm~~~mk~ii~~~~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~ 70 (247)
+-+..+|.+..+.|+|++++.+++++++ .. +. +.+-...+..+|-. .+..-.+...+..
T Consensus 38 ~~~~~~a~~~~~~~~~~~A~~~~~~al~--~~-~~-~~~~~~~la~~~~~-~~~~~~A~~~~~~ 96 (252)
T 2ho1_A 38 DAYIQLGLGYLQRGNTEQAKVPLRKALE--ID-PS-SADAHAALAVVFQT-EMEPKLADEEYRK 96 (252)
T ss_dssp HHHHHHHHHHHHTTCTGGGHHHHHHHHH--HC-TT-CHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHh--cC-CC-hHHHHHHHHHHHHH-cCCHHHHHHHHHH
Confidence 3456788888899999999999999987 32 33 45555555555543 3455556555544
No 46
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=82.49 E-value=24 Score=30.81 Aligned_cols=172 Identities=9% Similarity=-0.012 Sum_probs=79.8
Q ss_pred HhHHHHHHHHHHhcChHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhhhhhcchhhhhHH
Q 025828 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSL 86 (247)
Q Consensus 7 e~~~~~Aklaeq~ery~dm~~~mk~ii~~~~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~~ 86 (247)
+-+..++.+....|+|++++.+++++++ .. |. +.+-...+..+|-. .+....+...+............ .....
T Consensus 305 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~--~~-~~-~~~~~~~l~~~~~~-~~~~~~A~~~~~~~~~~~~~~~~-~~~~l 378 (514)
T 2gw1_A 305 SVYYHRGQMNFILQNYDQAGKDFDKAKE--LD-PE-NIFPYIQLACLAYR-ENKFDDCETLFSEAKRKFPEAPE-VPNFF 378 (514)
T ss_dssp HHHHHHHHHHHHTTCTTHHHHHHHHHHH--TC-SS-CSHHHHHHHHHTTT-TTCHHHHHHHHHHHHHHSTTCSH-HHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHH--hC-hh-hHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHcccCHH-HHHHH
Confidence 3455677788888888888888888876 33 44 23333334444322 34445555555443322111110 11111
Q ss_pred HHHH-HHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhHHhhhccccccchhhcccchhHHHHHHHHHHHHHHHHHHHh
Q 025828 87 VKDY-RSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIAL 165 (247)
Q Consensus 87 i~~y-k~ki~~EL~~~C~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~ 165 (247)
..-| +..=-++-......++.+- |........+..+-..|..|.... ..+ -.+.|...|++|+.+
T Consensus 379 a~~~~~~~~~~~A~~~~~~a~~~~-----~~~~~~~~~~~~~~~l~~~~~~~~--~~~-----~~~~A~~~~~~a~~~-- 444 (514)
T 2gw1_A 379 AEILTDKNDFDKALKQYDLAIELE-----NKLDGIYVGIAPLVGKATLLTRNP--TVE-----NFIEATNLLEKASKL-- 444 (514)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHH-----HTSSSCSSCSHHHHHHHHHHHTSC--CTT-----HHHHHHHHHHHHHHH--
T ss_pred HHHHHHCCCHHHHHHHHHHHHHhh-----hccchHHHHHHHHHHHHHHHhhhh--hcC-----CHHHHHHHHHHHHHh--
Confidence 1111 0001122233333333322 222111111112222333321100 011 246788888888764
Q ss_pred hcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025828 166 TDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (247)
Q Consensus 166 ~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (247)
.|.+| ....+.+..+. -.|+.++|+...+++++
T Consensus 445 ---~~~~~---~~~~~la~~~~-~~g~~~~A~~~~~~a~~ 477 (514)
T 2gw1_A 445 ---DPRSE---QAKIGLAQMKL-QQEDIDEAITLFEESAD 477 (514)
T ss_dssp ---CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHH
T ss_pred ---CcccH---HHHHHHHHHHH-HhcCHHHHHHHHHHHHH
Confidence 34443 33344555444 47999999988877765
No 47
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=81.74 E-value=19 Score=29.01 Aligned_cols=56 Identities=16% Similarity=-0.040 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHH
Q 025828 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAI 208 (247)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~a~ 208 (247)
.+.|...|++|+.++... .+|...+.++..-...|...|+.++|+...+++++-+-
T Consensus 199 ~~~A~~~~~~a~~~~~~~---~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~ 254 (338)
T 3ro2_A 199 FRDAVIAHEQRLLIAKEF---GDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLAR 254 (338)
T ss_dssp HHHHHHHHHHHHHHHHHH---TCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhc---CChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 356888899998888642 23344444444444455567999999998888876543
No 48
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=81.24 E-value=4.6 Score=29.66 Aligned_cols=47 Identities=17% Similarity=0.119 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025828 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (247)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (247)
-+.|.++|++|+++ .|.+| .+..|.+..|+. +|+.++|+...++|+.
T Consensus 29 ~~~A~~~~~~al~~-----~p~~~---~~~~~~~~~~~~-~~~~~~A~~~~~~al~ 75 (126)
T 4gco_A 29 YPTAMRHYNEAVKR-----DPENA---ILYSNRAACLTK-LMEFQRALDDCDTCIR 75 (126)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----CCCCH---HHHHHHhhHHHh-hccHHHHHHHHHHHHH
Confidence 36688899999864 34444 455666666665 7999999987777654
No 49
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=80.81 E-value=32 Score=31.03 Aligned_cols=47 Identities=6% Similarity=0.065 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025828 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (247)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (247)
.+.|.+.|++++++ .|.+| ....+.+.. |...|+.++|.+..+++++
T Consensus 532 ~~~A~~~~~~~~~~-----~p~~~---~~~~~l~~~-~~~~g~~~~A~~~~~~~l~ 578 (597)
T 2xpi_A 532 YDAAIDALNQGLLL-----STNDA---NVHTAIALV-YLHKKIPGLAITHLHESLA 578 (597)
T ss_dssp HHHHHHHHHHHHHH-----SSCCH---HHHHHHHHH-HHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----CCCCh---HHHHHHHHH-HHHhCCHHHHHHHHHHHHh
Confidence 46788888888765 25554 333333433 4458999999988777665
No 50
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=80.75 E-value=24 Score=29.62 Aligned_cols=189 Identities=14% Similarity=0.051 Sum_probs=96.0
Q ss_pred HhHHHHHHHHHHhcChHHHHHHHHHHhhccCCCCCCCHH----HHHHHHHHHhhhhhhhhhHHHHHHHHhhhhhhcchhh
Q 025828 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVE----ERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEE 82 (247)
Q Consensus 7 e~~~~~Aklaeq~ery~dm~~~mk~ii~~~~~~~~L~~e----ERnLls~ayKn~i~~~R~s~R~l~~ieqk~~~~~~~~ 82 (247)
..+..++...-..|+|++++.++.++++ .. +. +.. =...++.+|-. .+....+...+.....-....++..
T Consensus 10 ~~l~~~g~~~~~~g~~~~A~~~~~~al~--~~-~~-~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~ 84 (406)
T 3sf4_A 10 LELALEGERLCKSGDCRAGVSFFEAAVQ--VG-TE-DLKTLSAIYSQLGNAYFY-LHDYAKALEYHHHDLTLARTIGDQL 84 (406)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH--HC-CS-CHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHh--cC-cc-cHHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHhccccH
Confidence 4566788888899999999999999997 32 43 322 22344444432 3344444444432111110001100
Q ss_pred -----hhHHHHHHH-HHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhHHhhhccccccchhh-------cc---cchhH
Q 025828 83 -----HVSLVKDYR-SKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAE-------FK---VGDER 146 (247)
Q Consensus 83 -----~~~~i~~yk-~ki~~EL~~~C~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE-------~~---~~~~~ 146 (247)
......-|. ..=-++-...+...+.+.... .+....+..+-..|..|...-. -. ..++.
T Consensus 85 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~a 159 (406)
T 3sf4_A 85 GEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISREL-----NDKVGEARALYNLGNVYHAKGKSFGCPGPQDVGEFPEEV 159 (406)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHHHHHHHHTCC-------CCCCHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhc-----ccccchHHHHHHHHHHHHHcCCcccccccchhhhhhhhH
Confidence 000011110 001123344455555544332 1112222233334444433322 00 01233
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHH
Q 025828 147 KAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAI 208 (247)
Q Consensus 147 ~~~~~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~a~ 208 (247)
....+.|...|++|+.++.. . +.+|.......|.+..++ .+|+.++|+...++|+.-+-
T Consensus 160 ~~~~~~A~~~~~~al~~~~~-~-~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~~ 218 (406)
T 3sf4_A 160 RDALQAAVDFYEENLSLVTA-L-GDRAAQGRAFGNLGNTHY-LLGNFRDAVIAHEQRLLIAK 218 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-T-TCHHHHHHHHHHHHHHHH-HHTBHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHh-c-cCcHHHHHHHHHHHHHHH-HccCHHHHHHHHHHHHHHHH
Confidence 44577889999999998864 3 333444445555555555 47999999999888876543
No 51
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=80.57 E-value=22 Score=29.10 Aligned_cols=47 Identities=13% Similarity=0.071 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025828 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (247)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (247)
.+.|...|++|+++ .|.+| ....+.+..++ .+|+.++|+...++|++
T Consensus 288 ~~~A~~~~~~~~~~-----~~~~~---~~~~~~~~~~~-~~g~~~~A~~~~~~a~~ 334 (359)
T 3ieg_A 288 PVEAIRICSEVLQM-----EPDNV---NALKDRAEAYL-IEEMYDEAIQDYEAAQE 334 (359)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHh-----CcccH---HHHHHHHHHHH-HcCCHHHHHHHHHHHHh
Confidence 46688888888765 34443 34555666555 48999999887777654
No 52
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=80.54 E-value=5.6 Score=28.41 Aligned_cols=56 Identities=16% Similarity=-0.011 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHH
Q 025828 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAI 208 (247)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~a~ 208 (247)
.+.|...|++|++++... .+|..++.+++.-...|-..|+.++|+...++|++-+-
T Consensus 25 ~~~A~~~~~~al~~~~~~---~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~ 80 (164)
T 3ro3_A 25 FRDAVIAHEQRLLIAKEF---GDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLAR 80 (164)
T ss_dssp HHHHHHHHHHHHHHHHHH---TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHh---CCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 356888899999888642 23444444544444444457999999998888877553
No 53
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=80.28 E-value=19 Score=27.98 Aligned_cols=59 Identities=14% Similarity=0.159 Sum_probs=34.4
Q ss_pred HhHHHHHHHHHHhcChHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHH
Q 025828 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISS 70 (247)
Q Consensus 7 e~~~~~Aklaeq~ery~dm~~~mk~ii~~~~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~ 70 (247)
.-+..+|.+..+.|+|++++.+++++++ .. +. +..-...+..+|-. .+....+...+..
T Consensus 58 ~~~~~la~~~~~~~~~~~A~~~~~~~~~--~~-~~-~~~~~~~la~~~~~-~~~~~~A~~~~~~ 116 (243)
T 2q7f_A 58 IPYINFANLLSSVNELERALAFYDKALE--LD-SS-AATAYYGAGNVYVV-KEMYKEAKDMFEK 116 (243)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH--HC-TT-CHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHH--cC-Cc-chHHHHHHHHHHHH-hccHHHHHHHHHH
Confidence 4456677777788888888888888776 32 32 33444444444432 3444455555443
No 54
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=80.08 E-value=26 Score=29.47 Aligned_cols=29 Identities=10% Similarity=0.206 Sum_probs=25.4
Q ss_pred HHhHHHHHHHHHHhcChHHHHHHHHHHhh
Q 025828 6 REQYVYLAKLAEQAERYEEMVKFMDSLVT 34 (247)
Q Consensus 6 re~~~~~Aklaeq~ery~dm~~~mk~ii~ 34 (247)
-+-+..++.+..+.|+|++++.++++.++
T Consensus 99 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 127 (365)
T 4eqf_A 99 AEAWQFLGITQAENENEQAAIVALQRCLE 127 (365)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHh
Confidence 34567889999999999999999999997
No 55
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=79.83 E-value=34 Score=30.81 Aligned_cols=55 Identities=9% Similarity=0.004 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHHH
Q 025828 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEE 206 (247)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~ 206 (247)
.+.|.+.|++++++... . +.+|-....+++.-...|...|+.++|+...+++++.
T Consensus 491 ~~~A~~~~~~~~~~~~~-~-~~~p~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~ 545 (597)
T 2xpi_A 491 MQTAINHFQNALLLVKK-T-QSNEKPWAATWANLGHAYRKLKMYDAAIDALNQGLLL 545 (597)
T ss_dssp HHHHHHHHHHHHHHHHH-S-CCCSGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhc-c-ccchhhHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 46789999999987643 2 3456543334444344444589999999998888753
No 56
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=79.72 E-value=6.7 Score=32.74 Aligned_cols=54 Identities=15% Similarity=0.076 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchhhH-hhhHHHHHHHHhCCHHHHHHHHHHHHHHH
Q 025828 150 AENTMLSYKAAQDIALTDLAPTHPIRLGL-ALNFSVFYYEILNSSEKACTMAKQAFEEA 207 (247)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~p~rLgL-~LN~SVF~yei~~~~~~A~~iak~afd~a 207 (247)
.+.|...|++|+.+. .+..++..... ..|.+++|+. +|+.++|+..-++|++.+
T Consensus 131 ~~~Ai~~~~~al~~~---~~~~~~~~~~~~~~~lg~~y~~-~g~~~~A~~~~~~al~~~ 185 (293)
T 3u3w_A 131 YEYCILELKKLLNQQ---LTGIDVYQNLYIENAIANIYAE-NGYLKKGIDLFEQILKQL 185 (293)
T ss_dssp HHHHHHHHHHHHHTC---CCCSCTTHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh---cccccHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHH
Confidence 356889999999854 22333333343 4455555554 899999999999988644
No 57
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=79.49 E-value=24 Score=28.87 Aligned_cols=168 Identities=13% Similarity=0.120 Sum_probs=86.8
Q ss_pred HHHHHHHHHhcChHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhhhhhcchhhhhHHHHH
Q 025828 10 VYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKD 89 (247)
Q Consensus 10 ~~~Aklaeq~ery~dm~~~mk~ii~~~~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~~i~~ 89 (247)
..+|.+....|+|++++..++++++ . .+-+.+-...++.+|-. .+....+...+........... ........-
T Consensus 124 ~~~a~~~~~~~~~~~A~~~~~~~~~--~--~~~~~~~~~~~~~~~~~-~~~~~~A~~~~~~~~~~~~~~~-~~~~~la~~ 197 (359)
T 3ieg_A 124 RSQALDAFDGADYTAAITFLDKILE--V--CVWDAELRELRAECFIK-EGEPRKAISDLKAASKLKSDNT-EAFYKISTL 197 (359)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHH--H--CTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHTTCSCCH-HHHHHHHHH
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHH--h--CCCchHHHHHHHHHHHH-CCCHHHHHHHHHHHHHhCCCCH-HHHHHHHHH
Confidence 3447888999999999999999997 3 23455556666666544 3556666666654433221111 111111111
Q ss_pred HHH-HHHHHHHHHHHHHHHHhhhccCCCCCCCchhhHHhhhc--------cccccchhhcccchhHHHHHHHHHHHHHHH
Q 025828 90 YRS-KVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMK--------GDYYRYLAEFKVGDERKAAAENTMLSYKAA 160 (247)
Q Consensus 90 yk~-ki~~EL~~~C~eii~lid~~Lip~~~~~eskvfy~Kmk--------gDyyRYlaE~~~~~~~~~~~~~a~~aY~~A 160 (247)
|.. .=-++-...+..++.+ -|.. +....+|.++. |..+ +..+ -.+.|...|+++
T Consensus 198 ~~~~~~~~~A~~~~~~a~~~-----~~~~--~~~~~~~~~~~~~~~~~~~a~~~-----~~~~-----~~~~A~~~~~~~ 260 (359)
T 3ieg_A 198 YYQLGDHELSLSEVRECLKL-----DQDH--KRCFAHYKQVKKLNKLIESAEEL-----IRDG-----RYTDATSKYESV 260 (359)
T ss_dssp HHHHTCHHHHHHHHHHHHHH-----CTTC--HHHHHHHHHHHHHHHHHHHHHHH-----HHTT-----CHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHhh-----Cccc--hHHHHHHHHHHHHHHHHHHHHHH-----HHcC-----CHHHHHHHHHHH
Confidence 111 0011222233333321 2321 12222222211 2221 1111 145678888888
Q ss_pred HHHHhhcCCCCCcchhh-HhhhHHHHHHHHhCCHHHHHHHHHHHHHH
Q 025828 161 QDIALTDLAPTHPIRLG-LALNFSVFYYEILNSSEKACTMAKQAFEE 206 (247)
Q Consensus 161 ~~~a~~~L~pt~p~rLg-L~LN~SVF~yei~~~~~~A~~iak~afd~ 206 (247)
++. .|.+|.... +..+.+..++. +|+.++|+...++++..
T Consensus 261 ~~~-----~~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~~~~~~ 301 (359)
T 3ieg_A 261 MKT-----EPSVAEYTVRSKERICHCFSK-DEKPVEAIRICSEVLQM 301 (359)
T ss_dssp HHH-----CCSSHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred Hhc-----CCCchHHHHHHHHHHHHHHHH-ccCHHHHHHHHHHHHHh
Confidence 764 355654433 44455655554 89999999998887663
No 58
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=78.68 E-value=23 Score=28.06 Aligned_cols=47 Identities=19% Similarity=0.155 Sum_probs=34.6
Q ss_pred HHhHHHHHHHHHHhcChHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhh
Q 025828 6 REQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKN 56 (247)
Q Consensus 6 re~~~~~Aklaeq~ery~dm~~~mk~ii~~~~~~~~L~~eERnLls~ayKn 56 (247)
-+-+..++.+..+.|+|++++..++++++ .+ |. +.+=...+..+|..
T Consensus 39 ~~a~~~lg~~~~~~g~~~~A~~~~~~al~--~~-P~-~~~a~~~lg~~~~~ 85 (217)
T 2pl2_A 39 PEALYWLARTQLKLGLVNPALENGKTLVA--RT-PR-YLGGYMVLSEAYVA 85 (217)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH--HC-TT-CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH--hC-CC-cHHHHHHHHHHHHH
Confidence 34567889999999999999999999998 43 44 44555555555543
No 59
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=78.61 E-value=20 Score=27.29 Aligned_cols=166 Identities=10% Similarity=-0.051 Sum_probs=84.1
Q ss_pred HhHHHHHHHHHHhcChHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhhhhhcchhhhhHH
Q 025828 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSL 86 (247)
Q Consensus 7 e~~~~~Aklaeq~ery~dm~~~mk~ii~~~~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~~ 86 (247)
+-+..++.+..+.|+|++++.+++++++ .. |. +.+-...+..+|-. .+....+...+....+...... ......
T Consensus 9 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~--~~-~~-~~~~~~~l~~~~~~-~~~~~~A~~~~~~a~~~~~~~~-~~~~~l 82 (225)
T 2vq2_A 9 NIKTQLAMEYMRGQDYRQATASIEDALK--SD-PK-NELAWLVRAEIYQY-LKVNDKAQESFRQALSIKPDSA-EINNNY 82 (225)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH--HC-TT-CHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCH-HHHHHH
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHH--hC-cc-chHHHHHHHHHHHH-cCChHHHHHHHHHHHHhCCCCh-HHHHHH
Confidence 4456788889999999999999999997 32 33 35555555555543 3455556665544332211110 111111
Q ss_pred HHHHHHH--HHHHHHHHHHHHHHHhhhccCCCCCCCchhhHHhhhccccccchhhcccchhHHHHHHHHHHHHHHHHHHH
Q 025828 87 VKDYRSK--VESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIA 164 (247)
Q Consensus 87 i~~yk~k--i~~EL~~~C~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a 164 (247)
..-|... =-++-...+..++. .|. .+. ....+...|..|... ++ .+.|...|+++++.
T Consensus 83 ~~~~~~~~~~~~~A~~~~~~~~~------~~~--~~~-~~~~~~~l~~~~~~~-----~~-----~~~A~~~~~~~~~~- 142 (225)
T 2vq2_A 83 GWFLCGRLNRPAESMAYFDKALA------DPT--YPT-PYIANLNKGICSAKQ-----GQ-----FGLAEAYLKRSLAA- 142 (225)
T ss_dssp HHHHHTTTCCHHHHHHHHHHHHT------STT--CSC-HHHHHHHHHHHHHHT-----TC-----HHHHHHHHHHHHHH-
T ss_pred HHHHHHhcCcHHHHHHHHHHHHc------CcC--Ccc-hHHHHHHHHHHHHHc-----CC-----HHHHHHHHHHHHHh-
Confidence 1111110 01122222222222 121 111 122223344444221 11 35678888888764
Q ss_pred hhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHHH
Q 025828 165 LTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEE 206 (247)
Q Consensus 165 ~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~ 206 (247)
.|.+| ....+.+..++. .|+.++|+...++++..
T Consensus 143 ----~~~~~---~~~~~la~~~~~-~~~~~~A~~~~~~~~~~ 176 (225)
T 2vq2_A 143 ----QPQFP---PAFKELARTKML-AGQLGDADYYFKKYQSR 176 (225)
T ss_dssp ----STTCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred ----CCCCc---hHHHHHHHHHHH-cCCHHHHHHHHHHHHHh
Confidence 33443 233444544444 79999999988887653
No 60
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=76.91 E-value=34 Score=29.12 Aligned_cols=55 Identities=15% Similarity=-0.076 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHH
Q 025828 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAI 208 (247)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~a~ 208 (247)
+.|...|++|+.+.... .++...+.+++.-...|-..|+.++|+...++|++.+-
T Consensus 240 ~~A~~~~~~al~~~~~~---~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 294 (411)
T 4a1s_A 240 QAAIEHHQERLRIAREF---GDRAAERRANSNLGNSHIFLGQFEDAAEHYKRTLALAV 294 (411)
T ss_dssp HHHHHHHHHHHHHHHHH---TCHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhc---CCcHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHH
Confidence 56788888888887541 12333333443333444457888888888888776554
No 61
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=76.75 E-value=39 Score=29.79 Aligned_cols=162 Identities=7% Similarity=-0.011 Sum_probs=85.3
Q ss_pred HHHHHHHHHHhcChHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhhhhhcchhhhhHHHH
Q 025828 9 YVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVK 88 (247)
Q Consensus 9 ~~~~Aklaeq~ery~dm~~~mk~ii~~~~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~~i~ 88 (247)
+..++.+....|+|++++.+++++++ .. |. .+-...+..+|-. .+..-.+...+........... ........
T Consensus 246 ~~~~g~~~~~~~~~~~A~~~~~~~~~--~~-~~--~~~~~~l~~~~~~-~~~~~~A~~~~~~~~~~~~~~~-~~~~~l~~ 318 (537)
T 3fp2_A 246 LCYTGIFHFLKNNLLDAQVLLQESIN--LH-PT--PNSYIFLALTLAD-KENSQEFFKFFQKAVDLNPEYP-PTYYHRGQ 318 (537)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHH--HC-CC--HHHHHHHHHHTCC-SSCCHHHHHHHHHHHHHCTTCH-HHHHHHHH
T ss_pred HHHHHHHHHhcccHHHHHHHHHHHHh--cC-CC--chHHHHHHHHHHH-hcCHHHHHHHHHHHhccCCCCH-HHHHHHHH
Confidence 55677888888999999999999998 43 55 5555556655532 3444555555543322211110 01111111
Q ss_pred HHHH-HHHHHHHHHHHHHHHHhhhccCCCCCCCchhhHHhhhccccccchhhcccchhHHHHHHHHHHHHHHHHHHHhhc
Q 025828 89 DYRS-KVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTD 167 (247)
Q Consensus 89 ~yk~-ki~~EL~~~C~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~ 167 (247)
-|.. .=-++-...+..++.+ -|.. ..+ +...|..|... |+ .+.|...|++|++.
T Consensus 319 ~~~~~~~~~~A~~~~~~a~~~-----~~~~----~~~--~~~la~~~~~~-----g~-----~~~A~~~~~~~~~~---- 373 (537)
T 3fp2_A 319 MYFILQDYKNAKEDFQKAQSL-----NPEN----VYP--YIQLACLLYKQ-----GK-----FTESEAFFNETKLK---- 373 (537)
T ss_dssp HHHHTTCHHHHHHHHHHHHHH-----CTTC----SHH--HHHHHHHHHHT-----TC-----HHHHHHHHHHHHHH----
T ss_pred HHHhcCCHHHHHHHHHHHHHh-----CCCC----HHH--HHHHHHHHHHc-----CC-----HHHHHHHHHHHHHh----
Confidence 1110 0012223333343332 2321 112 22234333211 11 46688888888765
Q ss_pred CCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHHHH
Q 025828 168 LAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEA 207 (247)
Q Consensus 168 L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~a 207 (247)
.|.+| .+..+.+..+.. .|+.++|+...++++...
T Consensus 374 -~~~~~---~~~~~l~~~~~~-~g~~~~A~~~~~~a~~~~ 408 (537)
T 3fp2_A 374 -FPTLP---EVPTFFAEILTD-RGDFDTAIKQYDIAKRLE 408 (537)
T ss_dssp -CTTCT---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred -CCCCh---HHHHHHHHHHHH-hCCHHHHHHHHHHHHHcC
Confidence 34554 233444555544 799999999998887765
No 62
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=76.62 E-value=5.6 Score=35.05 Aligned_cols=54 Identities=11% Similarity=0.144 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHHHHhhc-CCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025828 151 ENTMLSYKAAQDIALTD-LAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (247)
Q Consensus 151 ~~a~~aY~~A~~~a~~~-L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (247)
+.|.++|++|+++.+.. ....||-.+...-|.+.-|+. +|+.++|+..-+++..
T Consensus 68 ~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~-~g~~~~A~~~~~ka~~ 122 (472)
T 4g1t_A 68 EAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYH-MGRLSDVQIYVDKVKH 122 (472)
T ss_dssp HHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHH-cCChHHHHHHHHHHHH
Confidence 67999999999998653 445677777777788877776 7999999877666543
No 63
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=76.60 E-value=24 Score=27.28 Aligned_cols=60 Identities=7% Similarity=-0.040 Sum_probs=26.1
Q ss_pred HhHHHHHHHHHHhcChHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHHH
Q 025828 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSI 71 (247)
Q Consensus 7 e~~~~~Aklaeq~ery~dm~~~mk~ii~~~~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~i 71 (247)
..+..+|...-+.|+|++++.+++++++ . .+-+.+-...+..+|- ..+....+...+...
T Consensus 24 ~~~~~~a~~~~~~~~~~~A~~~~~~~l~--~--~~~~~~~~~~la~~~~-~~~~~~~A~~~~~~~ 83 (243)
T 2q7f_A 24 MTGGQQMGRGSEFGDYEKAAEAFTKAIE--E--NKEDAIPYINFANLLS-SVNELERALAFYDKA 83 (243)
T ss_dssp ------------------CCTTHHHHHT--T--CTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCHHHHHHHHHHHHH--h--CcccHHHHHHHHHHHH-HcCCHHHHHHHHHHH
Confidence 3456778888889999999999999987 3 2334555555555554 345556666666543
No 64
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=76.55 E-value=26 Score=27.66 Aligned_cols=29 Identities=17% Similarity=0.261 Sum_probs=19.7
Q ss_pred hhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025828 176 LGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (247)
Q Consensus 176 LgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (247)
....++.+..++. +|+.++|+...++++.
T Consensus 215 ~~~~~~la~~~~~-~g~~~~A~~~~~~al~ 243 (275)
T 1xnf_A 215 SETNFYLGKYYLS-LGDLDSATALFKLAVA 243 (275)
T ss_dssp HHHHHHHHHHHHH-TTCHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHH-cCCHHHHHHHHHHHHh
Confidence 3445555655554 7999999987777653
No 65
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=76.28 E-value=7.8 Score=28.27 Aligned_cols=53 Identities=6% Similarity=-0.031 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHH
Q 025828 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAF 204 (247)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~af 204 (247)
-+.|.+.|++|+++.. ..++.++.+-....|.+..+ .-+|+.++|++.-++|+
T Consensus 58 ~~~A~~~~~~al~~~~-~~~~~~~~~a~~~~~lg~~~-~~~~~~~~A~~~~~kal 110 (127)
T 4gcn_A 58 FAECVQFCEKAVEVGR-ETRADYKLIAKAMSRAGNAF-QKQNDLSLAVQWFHRSL 110 (127)
T ss_dssp HHHHHHHHHHHHHHHH-HTTCCHHHHHHHHHHHHHHH-HHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCc-ccchhhHHHHHHHHHHHHHH-HHcCCHHHHHHHHHHHH
Confidence 3678999999999875 34545544333444555554 45899999998655554
No 66
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=76.11 E-value=8 Score=26.68 Aligned_cols=54 Identities=6% Similarity=-0.021 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025828 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (247)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (247)
.+.|...|++|+.+.. ..++.+|.......+.+..++. +|+.++|+...++++.
T Consensus 54 ~~~A~~~~~~~~~~~~-~~~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~~~~~ 107 (131)
T 1elr_A 54 YNKCRELCEKAIEVGR-ENREDYRQIAKAYARIGNSYFK-EEKYKDAIHFYNKSLA 107 (131)
T ss_dssp HHHHHHHHHHHHHHHH-HSTTCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcc-ccchhHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHH
Confidence 3568889999998874 3345555445566677776665 7999999887766665
No 67
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=75.88 E-value=30 Score=28.02 Aligned_cols=56 Identities=13% Similarity=-0.093 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCC-cchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHHH
Q 025828 150 AENTMLSYKAAQDIALTDLAPTH-PIRLGLALNFSVFYYEILNSSEKACTMAKQAFEE 206 (247)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~-p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~ 206 (247)
.+.|...|++|+.+....-.+.+ |-......+.+..++ .+|+.++|+...++++..
T Consensus 209 ~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~a~~~ 265 (330)
T 3hym_B 209 WKTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCR-KLKKYAEALDYHRQALVL 265 (330)
T ss_dssp HHHHHHHHHHHHHHHTTTSCSCTTTTCCHHHHHHHHHHH-HTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHhh
Confidence 46688999999998854333222 333344555666555 479999999988887653
No 68
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=75.28 E-value=9.5 Score=25.85 Aligned_cols=45 Identities=18% Similarity=0.212 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHH
Q 025828 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAF 204 (247)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~af 204 (247)
+.|...|++|+.+ .|.+| ....|.+..++. +|+.++|+...++|+
T Consensus 21 ~~A~~~~~~al~~-----~p~~~---~~~~~lg~~~~~-~g~~~~A~~~~~~al 65 (111)
T 2l6j_A 21 REAVHCYDQLITA-----QPQNP---VGYSNKAMALIK-LGEYTQAIQMCQQGL 65 (111)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCCCH---HHHHHHHHHHHH-hcCHHHHHHHHHHHH
Confidence 5688899999865 34444 345566666665 799999988776665
No 69
>3lf9_A 4E10_D0_1IS1A_001_C (T161); epitope-scaffold, immune system; 2.00A {Artificial gene}
Probab=74.16 E-value=19 Score=27.64 Aligned_cols=50 Identities=22% Similarity=0.157 Sum_probs=38.6
Q ss_pred cChHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHH
Q 025828 20 ERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIIS 69 (247)
Q Consensus 20 ery~dm~~~mk~ii~~~~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~ 69 (247)
+|.|..++++|.-+..-..|++||.|-|.=|.--.|...-.-|-|.|-+.
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~plTEERRKeLVK~akk~aEeaKVAIRNIR 60 (121)
T 3lf9_A 11 ERMDKSVEALKNNLSKVRTGGGGTEERRKDLVKIVRGEAEGGRVAVRNIA 60 (121)
T ss_dssp HHHHHHHHHHHHHHHHCCCSSBCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 57788888887655211124999999999999999998888888888774
No 70
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=74.13 E-value=12 Score=24.23 Aligned_cols=47 Identities=19% Similarity=0.344 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025828 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (247)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (247)
.+.|...|++|+.+ .|.+| ....+.+..++. +|+.++|+...++++.
T Consensus 25 ~~~A~~~~~~a~~~-----~~~~~---~~~~~l~~~~~~-~~~~~~A~~~~~~a~~ 71 (91)
T 1na3_A 25 YDEAIEYYQKALEL-----DPNNA---EAWYNLGNAYYK-QGDYDEAIEYYQKALE 71 (91)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc-----CCCCH---HHHHHHHHHHHH-HhhHHHHHHHHHHHHh
Confidence 35688899988864 34443 344566666554 7999999988777765
No 71
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=73.90 E-value=11 Score=28.64 Aligned_cols=55 Identities=7% Similarity=0.007 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHHHH
Q 025828 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEA 207 (247)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~a 207 (247)
+.|...|++|+.+++ ..+ .+|...+.+++.-...|-.+|++++|+...++|+.-+
T Consensus 83 ~~A~~~~~~al~~~~-~~~-~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 137 (203)
T 3gw4_A 83 DAARRCFLEERELLA-SLP-EDPLAASANAYEVATVALHFGDLAGARQEYEKSLVYA 137 (203)
T ss_dssp HHHHHHHHHHHHHHH-HSC-CCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH-HcC-ccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 568999999999986 343 2454455544444444445899999999999988654
No 72
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=73.54 E-value=34 Score=27.61 Aligned_cols=60 Identities=10% Similarity=-0.024 Sum_probs=42.4
Q ss_pred HhHHHHHHHHHHhcChHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHHH
Q 025828 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSI 71 (247)
Q Consensus 7 e~~~~~Aklaeq~ery~dm~~~mk~ii~~~~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~i 71 (247)
+.++.+|...-+.|+|++++.+++++++ .. |. +.+-...+..+|-. .+....+...+...
T Consensus 22 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~--~~-~~-~~~~~~~l~~~~~~-~~~~~~A~~~~~~a 81 (327)
T 3cv0_A 22 ENPMEEGLSMLKLANLAEAALAFEAVCQ--AA-PE-REEAWRSLGLTQAE-NEKDGLAIIALNHA 81 (327)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHH--HC-TT-CHHHHHHHHHHHHH-TTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHH--hC-CC-CHHHHHHHHHHHHH-cCCHHHHHHHHHHH
Confidence 4568899999999999999999999997 32 43 55555566666554 35556666666543
No 73
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=73.33 E-value=39 Score=28.08 Aligned_cols=58 Identities=12% Similarity=-0.018 Sum_probs=40.6
Q ss_pred HhHHHHHHHHHHhcChHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHH
Q 025828 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIIS 69 (247)
Q Consensus 7 e~~~~~Aklaeq~ery~dm~~~mk~ii~~~~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~ 69 (247)
+.+..++.+..+.|+|++++.++.++++ .. | -+.+=...+..+|.. .+....+...+.
T Consensus 65 ~~~~~~~~~~~~~g~~~~A~~~~~~al~--~~-p-~~~~~~~~l~~~~~~-~g~~~~A~~~~~ 122 (368)
T 1fch_A 65 PQPFEEGLRRLQEGDLPNAVLLFEAAVQ--QD-P-KHMEAWQYLGTTQAE-NEQELLAISALR 122 (368)
T ss_dssp SSHHHHHHHHHHTTCHHHHHHHHHHHHH--SC-T-TCHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHH--hC-C-CCHHHHHHHHHHHHH-CcCHHHHHHHHH
Confidence 4577899999999999999999999997 43 3 345555666666543 244445555544
No 74
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=73.29 E-value=13 Score=30.94 Aligned_cols=65 Identities=18% Similarity=0.147 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHHHhhcccCCCchH
Q 025828 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIAELDTLGEESYK 220 (247)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~a~~~ld~l~ee~~~ 220 (247)
-+.|...|++|++++.. ..++..++.+++.--..|.-+|+.++|+. ..|+.|+.-.+.++...++
T Consensus 212 y~~Al~~~~kal~~~~~---~~~~~~~~~~~~~lg~~y~~~g~~~~Ai~---~~~~~Al~~~~~~~~~~~~ 276 (293)
T 2qfc_A 212 YEESLYQVNKAIEISCR---INSMALIGQLYYQRGECLRKLEYEEAEIE---DAYKKASFFFDILEMHAYK 276 (293)
T ss_dssp HHHHHHHHHHHHHHHHH---TTBCSSHHHHHHHHHHHHHHTTCCHHHHH---HHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHHHHh---cCcHHHHHHHHHHHHHHHHHcCCcHHHHH---HHHHHHHHHHHHhCcHhhH
Confidence 46789999999999853 23444556555555555566899999942 2344444444445555553
No 75
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=73.21 E-value=11 Score=26.50 Aligned_cols=47 Identities=15% Similarity=0.261 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHHH
Q 025828 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEE 206 (247)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~ 206 (247)
+.|...|++|+++ .|.+ ..+..|.+..++. +|+.++|+...++++..
T Consensus 44 ~~A~~~~~~al~~-----~p~~---~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~ 90 (117)
T 3k9i_A 44 RKAEAVLANGVKQ-----FPNH---QALRVFYAMVLYN-LGRYEQGVELLLKIIAE 90 (117)
T ss_dssp HHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCc---hHHHHHHHHHHHH-cCCHHHHHHHHHHHHHh
Confidence 6788899988864 3444 3456677776665 79999999988887754
No 76
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=72.74 E-value=12 Score=31.92 Aligned_cols=55 Identities=11% Similarity=0.042 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHHH
Q 025828 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEE 206 (247)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~ 206 (247)
+.|...|++|+.++...-.+.+|.......|.+..+++ .|+.++|.....++++-
T Consensus 110 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~ 164 (373)
T 1hz4_A 110 QTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWA-WARLDEAEASARSGIEV 164 (373)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHH
Confidence 56888999999988765555556665566667777666 69999999888887654
No 77
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=72.45 E-value=17 Score=25.32 Aligned_cols=49 Identities=16% Similarity=0.145 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025828 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (247)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (247)
+.|...|++++. +.|.+|......++.+..++. +|+.++|+..-++++.
T Consensus 56 ~~A~~~~~~~~~-----~~p~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~~~~ 104 (129)
T 2xev_A 56 QLAEAQFRDLVS-----RYPTHDKAAGGLLKLGLSQYG-EGKNTEAQQTLQQVAT 104 (129)
T ss_dssp HHHHHHHHHHHH-----HCTTSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----HCCCCcccHHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 567888888875 346776655566666766664 7999999987766654
No 78
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=71.77 E-value=14 Score=24.54 Aligned_cols=46 Identities=15% Similarity=0.156 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025828 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (247)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (247)
+.|...|++|+.+. |.+ .....+.+..++. +|+.++|+...++++.
T Consensus 23 ~~A~~~~~~a~~~~-----~~~---~~~~~~~a~~~~~-~~~~~~A~~~~~~a~~ 68 (112)
T 2kck_A 23 TESIDLFEKAIQLD-----PEE---SKYWLMKGKALYN-LERYEEAVDCYNYVIN 68 (112)
T ss_dssp HHHHHHHHHHHHHC-----CCC---HHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhC-----cCC---HHHHHHHHHHHHH-ccCHHHHHHHHHHHHH
Confidence 56888898888642 333 3445667776665 7999999987777664
No 79
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=71.56 E-value=10 Score=26.94 Aligned_cols=49 Identities=27% Similarity=0.214 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025828 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (247)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (247)
+.|...|++|+. +.|.+|....+..+.+..++. +|+.++|+...++++.
T Consensus 45 ~~A~~~~~~a~~-----~~~~~~~~~~~~~~~a~~~~~-~~~~~~A~~~~~~~~~ 93 (148)
T 2dba_A 45 GGALAAYTQALG-----LDATPQDQAVLHRNRAACHLK-LEDYDKAETEASKAIE 93 (148)
T ss_dssp HHHHHHHHHHHT-----SCCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----HcccchHHHHHHHHHHHHHHH-HccHHHHHHHHHHHHh
Confidence 446667776653 445555555666666666554 6888888777776654
No 80
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=71.43 E-value=33 Score=26.55 Aligned_cols=28 Identities=4% Similarity=0.231 Sum_probs=24.5
Q ss_pred HhHHHHHHHHHHhcChHHHHHHHHHHhh
Q 025828 7 EQYVYLAKLAEQAERYEEMVKFMDSLVT 34 (247)
Q Consensus 7 e~~~~~Aklaeq~ery~dm~~~mk~ii~ 34 (247)
.-+..++.+....|+|++++.++++.+.
T Consensus 80 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~ 107 (258)
T 3uq3_A 80 KSFARIGNAYHKLGDLKKTIEYYQKSLT 107 (258)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHh
Confidence 3456788899999999999999999997
No 81
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=71.36 E-value=16 Score=27.17 Aligned_cols=46 Identities=11% Similarity=0.084 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025828 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (247)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (247)
+.|...|++|+.+ .|.+ .....|.+..|+. +|+.++|+...++++.
T Consensus 62 ~~A~~~~~~al~~-----~p~~---~~~~~~lg~~~~~-~g~~~~A~~~~~~al~ 107 (164)
T 3sz7_A 62 EKAAEDAELATVV-----DPKY---SKAWSRLGLARFD-MADYKGAKEAYEKGIE 107 (164)
T ss_dssp HHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCC---HHHHHHHHHHHHH-ccCHHHHHHHHHHHHH
Confidence 4456666666543 2333 2334445554444 5777777665555544
No 82
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=70.88 E-value=39 Score=27.07 Aligned_cols=65 Identities=12% Similarity=0.089 Sum_probs=46.3
Q ss_pred cHHhHHHHHHHHHHhcChHHHHHHHHHHhhccCCCCCC--CHHHHHHHHHHHhhhhhhhhhHHHHHHHHhh
Q 025828 5 TREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATEL--TVEERNLLSVAYKNVIGSLRAAWRIISSIEQ 73 (247)
Q Consensus 5 ~re~~~~~Aklaeq~ery~dm~~~mk~ii~~~~~~~~L--~~eERnLls~ayKn~i~~~R~s~R~l~~ieq 73 (247)
.-+.+..+|...-+.|+|++++..+.++++ .. |.- ..+=...+..+|-. .+....|...+..+..
T Consensus 14 ~~~~~~~~a~~~~~~g~~~~A~~~~~~~l~--~~-p~~~~~~~a~~~lg~~~~~-~~~~~~A~~~~~~~l~ 80 (261)
T 3qky_A 14 SPQEAFERAMEFYNQGKYDRAIEYFKAVFT--YG-RTHEWAADAQFYLARAYYQ-NKEYLLAASEYERFIQ 80 (261)
T ss_dssp SHHHHHHHHHHHHHTTCHHHHHHHHHHHGG--GC-SCSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCHHHHHHHHHHHHH--hC-CCCcchHHHHHHHHHHHHH-hCcHHHHHHHHHHHHH
Confidence 456788999999999999999999999997 32 332 25555666666643 4666677777765443
No 83
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=70.80 E-value=82 Score=30.75 Aligned_cols=57 Identities=18% Similarity=0.230 Sum_probs=39.0
Q ss_pred HhHHHHHHHHHHhcChHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHH
Q 025828 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRII 68 (247)
Q Consensus 7 e~~~~~Aklaeq~ery~dm~~~mk~ii~~~~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l 68 (247)
+-+..++.+..+.|+|++++.+.++.++ .+ |+. .+=.+-|..+|... +..-.|...+
T Consensus 10 ~al~nLG~~~~~~G~~~eAi~~~~kAl~--l~-P~~-~~a~~nLg~~l~~~-g~~~eA~~~~ 66 (723)
T 4gyw_A 10 DSLNNLANIKREQGNIEEAVRLYRKALE--VF-PEF-AAAHSNLASVLQQQ-GKLQEALMHY 66 (723)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH--HC-SCC-HHHHHHHHHHHHHT-TCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHH--hC-CCC-HHHHHHHHHHHHHc-CCHHHHHHHH
Confidence 4567889999999999999999999998 43 554 44455566665542 3344444443
No 84
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=70.77 E-value=40 Score=27.20 Aligned_cols=60 Identities=12% Similarity=0.053 Sum_probs=40.5
Q ss_pred HhHHHHHHHHHHhcChHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHHH
Q 025828 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSI 71 (247)
Q Consensus 7 e~~~~~Aklaeq~ery~dm~~~mk~ii~~~~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~i 71 (247)
.-+..++.+..+.|+|++++.+++++++ .. |. +.+-...+..+|- ..+....|.+.+...
T Consensus 56 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~--~~-~~-~~~~~~~la~~~~-~~~~~~~A~~~~~~~ 115 (327)
T 3cv0_A 56 EAWRSLGLTQAENEKDGLAIIALNHARM--LD-PK-DIAVHAALAVSHT-NEHNANAALASLRAW 115 (327)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH--HC-TT-CHHHHHHHHHHHH-HTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHh--cC-cC-CHHHHHHHHHHHH-HcCCHHHHHHHHHHH
Confidence 4456788899999999999999999997 32 33 4455555555553 344555666666543
No 85
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=69.67 E-value=18 Score=24.20 Aligned_cols=47 Identities=19% Similarity=0.148 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025828 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (247)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (247)
+.|...|++|++. .|.+|.. ...+.+..++. +|+.++|+...++|+.
T Consensus 17 ~~A~~~~~~al~~-----~p~~~~~--~~~~lg~~~~~-~~~~~~A~~~~~~al~ 63 (99)
T 2kc7_A 17 ENALQALEEFLQT-----EPVGKDE--AYYLMGNAYRK-LGDWQKALNNYQSAIE 63 (99)
T ss_dssp HHHHHHHHHHHHH-----CSSTHHH--HHHHHHHHHHH-HTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----CCCcHHH--HHHHHHHHHHH-cCCHHHHHHHHHHHHh
Confidence 5678888888763 4455421 45666766665 7999999887776654
No 86
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=69.56 E-value=37 Score=26.29 Aligned_cols=26 Identities=15% Similarity=0.161 Sum_probs=16.7
Q ss_pred HHHHHHHHHHhcChHHHHHHHHHHhh
Q 025828 9 YVYLAKLAEQAERYEEMVKFMDSLVT 34 (247)
Q Consensus 9 ~~~~Aklaeq~ery~dm~~~mk~ii~ 34 (247)
+..++.+..+.|+|++++.++.+.++
T Consensus 41 ~~~~~~~~~~~~~~~~A~~~~~~a~~ 66 (258)
T 3uq3_A 41 LNNRAAAEYEKGEYETAISTLNDAVE 66 (258)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHH
Confidence 44556666666677777766666664
No 87
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=69.28 E-value=49 Score=27.60 Aligned_cols=52 Identities=8% Similarity=-0.051 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHH
Q 025828 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAF 204 (247)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~af 204 (247)
-+.|...|++|+.+.... +. +| ..+.++.-.+..|-.+|+.++|+...++++
T Consensus 171 ~~~A~~~~~~al~~~~~~-~~-~~-~~~~~~~~~g~~~~~~g~~~~A~~~~~~al 222 (307)
T 2ifu_A 171 FDEAAASLQKEKSMYKEM-EN-YP-TCYKKCIAQVLVQLHRADYVAAQKCVRESY 222 (307)
T ss_dssp HHHHHHHHHHHHHHHHHT-TC-HH-HHHHHHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHc-CC-hh-HHHHHHHHHHHHHHHcCCHHHHHHHHHHHh
Confidence 467899999999988642 22 22 333233334444556799999988766654
No 88
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=68.68 E-value=22 Score=24.76 Aligned_cols=49 Identities=10% Similarity=0.074 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025828 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (247)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (247)
+.|...|++++. ..|.+|..-...++.+..++. .|+.++|+...+++++
T Consensus 19 ~~A~~~~~~~~~-----~~p~~~~~~~~~~~lg~~~~~-~~~~~~A~~~~~~~~~ 67 (129)
T 2xev_A 19 DDASQLFLSFLE-----LYPNGVYTPNALYWLGESYYA-TRNFQLAEAQFRDLVS 67 (129)
T ss_dssp HHHHHHHHHHHH-----HCSSSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----HCCCCcccHHHHHHHHHHHHH-hccHHHHHHHHHHHHH
Confidence 556777777764 356788655566666666665 7999999998887765
No 89
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=66.28 E-value=20 Score=25.24 Aligned_cols=46 Identities=22% Similarity=0.132 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025828 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (247)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (247)
+.|...|++|+.+ .|.+| .+..|.+..++. +|+.++|+...++|+.
T Consensus 21 ~~A~~~~~~al~~-----~p~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~al~ 66 (126)
T 3upv_A 21 PNAVKAYTEMIKR-----APEDA---RGYSNRAAALAK-LMSFPEAIADCNKAIE 66 (126)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCh---HHHHHHHHHHHH-hcCHHHHHHHHHHHHH
Confidence 4566677766653 23333 334444444443 5777777776666554
No 90
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=66.28 E-value=19 Score=26.20 Aligned_cols=47 Identities=6% Similarity=-0.007 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025828 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (247)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (247)
.+.|...|++|+++ .|.+| ....|.+..++. +|+.++|+..-++|+.
T Consensus 63 ~~~A~~~~~~al~~-----~p~~~---~a~~~lg~~~~~-~~~~~~A~~~~~~al~ 109 (126)
T 4gco_A 63 FQRALDDCDTCIRL-----DSKFI---KGYIRKAACLVA-MREWSKAQRAYEDALQ 109 (126)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----hhhhh---HHHHHHHHHHHH-CCCHHHHHHHHHHHHH
Confidence 35688899999864 44544 344556665554 7999999876666543
No 91
>1lyp_A CAP18; lipopolysaccharide-binding protein; NMR {Oryctolagus cuniculus} SCOP: j.17.1.1
Probab=65.81 E-value=14 Score=21.05 Aligned_cols=26 Identities=23% Similarity=0.461 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhh
Q 025828 85 SLVKDYRSKVESELSDVCGSILKLLD 110 (247)
Q Consensus 85 ~~i~~yk~ki~~EL~~~C~eii~lid 110 (247)
+.++.||.+|.+.|..+.+.|-.++.
T Consensus 4 krlrkfrnkikeklkkigqkiqgllp 29 (32)
T 1lyp_A 4 KRLRKFRNKIKEKLKKIGQKIQGLLP 29 (32)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 56788999999999999999887764
No 92
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=64.94 E-value=23 Score=28.12 Aligned_cols=54 Identities=17% Similarity=0.198 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchhh-----HhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025828 150 AENTMLSYKAAQDIALTDLAPTHPIRLG-----LALNFSVFYYEILNSSEKACTMAKQAFE 205 (247)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~p~rLg-----L~LN~SVF~yei~~~~~~A~~iak~afd 205 (247)
-+.|..+|++|+++.-. .|+..++.+. .-.|-+.-+.. +|+.++|+.-+.+|+.
T Consensus 27 ~eeAi~~Y~kAL~l~p~-~~~~~a~~~~~~~a~a~~n~g~al~~-Lgr~~eAl~~~~kAL~ 85 (159)
T 2hr2_A 27 YDEAAANCRRAMEISHT-MPPEEAFDHAGFDAFCHAGLAEALAG-LRSFDEALHSADKALH 85 (159)
T ss_dssp HHHHHHHHHHHHHHHTT-SCTTSCCCHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCC-CcchhhhhhccchHHHHHHHHHHHHH-CCCHHHHHHHHHHHHH
Confidence 46799999999998743 3322333333 66666666555 7999999998777765
No 93
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=64.62 E-value=23 Score=24.42 Aligned_cols=46 Identities=11% Similarity=0.085 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025828 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (247)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (247)
+.|...|++|+.+ .|.+| ....+.+..++. +|+.++|+...++++.
T Consensus 67 ~~A~~~~~~a~~~-----~~~~~---~~~~~la~~~~~-~~~~~~A~~~~~~~~~ 112 (133)
T 2lni_A 67 QLALKDCEECIQL-----EPTFI---KGYTRKAAALEA-MKDYTKAMDVYQKALD 112 (133)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCch---HHHHHHHHHHHH-HhhHHHHHHHHHHHHH
Confidence 5678888888864 33333 345566665554 7999999988777664
No 94
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=64.46 E-value=9 Score=27.08 Aligned_cols=50 Identities=12% Similarity=0.050 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHHH
Q 025828 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEE 206 (247)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~ 206 (247)
+.|...|++|++ +.+.+|-......|.+..|+. +|+.++|+...++|+..
T Consensus 7 ~~A~~~~~~al~-----~~~~~p~~~~~~~~lg~~~~~-~~~~~~A~~~~~~al~~ 56 (117)
T 3k9i_A 7 AQAVPYYEKAIA-----SGLQGKDLAECYLGLGSTFRT-LGEYRKAEAVLANGVKQ 56 (117)
T ss_dssp CCCHHHHHHHHS-----SCCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----cCCCCccHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHh
Confidence 346778888875 334467777777888887776 79999999988887653
No 95
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=64.01 E-value=30 Score=25.08 Aligned_cols=49 Identities=16% Similarity=0.079 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHHHH
Q 025828 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEA 207 (247)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~a 207 (247)
-+.|..+|++|+.+ .|.+|. ..+|.+..++. +|+.++|+...++++.-.
T Consensus 68 ~~~A~~~~~~al~~-----~p~~~~---~~~~lg~~~~~-~g~~~~A~~~~~~al~~~ 116 (142)
T 2xcb_A 68 YEQALQSYSYGALM-----DINEPR---FPFHAAECHLQ-LGDLDGAESGFYSARALA 116 (142)
T ss_dssp HHHHHHHHHHHHHH-----CTTCTH---HHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc-----CCCCcH---HHHHHHHHHHH-cCCHHHHHHHHHHHHHhC
Confidence 36688999999864 466663 34566666555 799999998877776544
No 96
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=63.50 E-value=23 Score=24.86 Aligned_cols=16 Identities=19% Similarity=0.358 Sum_probs=7.6
Q ss_pred hCCHHHHHHHHHHHHH
Q 025828 190 LNSSEKACTMAKQAFE 205 (247)
Q Consensus 190 ~~~~~~A~~iak~afd 205 (247)
+|+.++|+...++++.
T Consensus 90 ~~~~~~A~~~~~~a~~ 105 (137)
T 3q49_B 90 MESYDEAIANLQRAYS 105 (137)
T ss_dssp TTCHHHHHHHHHHHHH
T ss_pred HhhHHHHHHHHHHHHH
Confidence 4555555444444443
No 97
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=62.99 E-value=26 Score=23.86 Aligned_cols=50 Identities=20% Similarity=0.349 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHH
Q 025828 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAI 208 (247)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~a~ 208 (247)
.+.|...|++|+.. .|.+| ....+.+..++. .|+.++|+...+++++..-
T Consensus 20 ~~~A~~~~~~a~~~-----~~~~~---~~~~~la~~~~~-~~~~~~A~~~~~~~~~~~~ 69 (131)
T 1elr_A 20 FDTALKHYDKAKEL-----DPTNM---TYITNQAAVYFE-KGDYNKCRELCEKAIEVGR 69 (131)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc-----CCccH---HHHHHHHHHHHH-hccHHHHHHHHHHHHhhcc
Confidence 35678888888765 23443 344566666655 7999999999888877653
No 98
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=62.48 E-value=25 Score=24.60 Aligned_cols=48 Identities=8% Similarity=0.015 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHHHH
Q 025828 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEA 207 (247)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~a 207 (247)
+.|...|++|+.+ .|.+| ....+.+..++. +|+.++|+...++++.-.
T Consensus 55 ~~A~~~~~~al~~-----~p~~~---~~~~~lg~~~~~-~~~~~~A~~~~~~al~~~ 102 (126)
T 3upv_A 55 PEAIADCNKAIEK-----DPNFV---RAYIRKATAQIA-VKEYASALETLDAARTKD 102 (126)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCcH---HHHHHHHHHHHH-HhCHHHHHHHHHHHHHhC
Confidence 5688899999865 34443 344555655555 799999999888877654
No 99
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=62.25 E-value=22 Score=26.61 Aligned_cols=47 Identities=15% Similarity=0.223 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025828 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (247)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (247)
-+.|.++|++|+++ .|.|| ....+.+..|+. +|+.++|+...+++..
T Consensus 21 ~~~A~~~~~~al~~-----~p~~~---~~~~~la~~~~~-~~~~~~a~~~~~~~~~ 67 (184)
T 3vtx_A 21 FDGAIRAYKKVLKA-----DPNNV---ETLLKLGKTYMD-IGLPNDAIESLKKFVV 67 (184)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHH-CCCHHHHHHHHHHHHh
Confidence 36788899999864 45554 333444444444 7888888887777643
No 100
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=61.91 E-value=35 Score=23.31 Aligned_cols=73 Identities=16% Similarity=0.118 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHHHhhcccCCCchHhHHHHHHHH
Q 025828 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIAELDTLGEESYKDSTLIMQLL 229 (247)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~a~~~ld~l~ee~~~d~~~ilqlL 229 (247)
-+.|...|++|+++ .|.+|. ...+.+..|+ .+|+.++|+...++|+.-+-.. ....-...+.++|
T Consensus 23 ~~~A~~~~~~al~~-----~p~~~~---a~~~lg~~~~-~~g~~~~A~~~~~~al~l~~~~------~~~~~~~~l~~~l 87 (100)
T 3ma5_A 23 ASRALALFEELVET-----DPDYVG---TYYHLGKLYE-RLDRTDDAIDTYAQGIEVAREE------GTQKDLSELQDAK 87 (100)
T ss_dssp HHHHHHHHHHHHHH-----STTCTH---HHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHH------SCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----CCCcHH---HHHHHHHHHH-HcCCHHHHHHHHHHHHhhhhcC------CchhHHHHHHHHH
Confidence 36688899988864 344443 4455565555 4899999999888887765332 1233345566666
Q ss_pred HhhHhhhh
Q 025828 230 RDNLTLWT 237 (247)
Q Consensus 230 rdNl~~W~ 237 (247)
+..=..|.
T Consensus 88 ~~~~~~~~ 95 (100)
T 3ma5_A 88 LKAEGLEH 95 (100)
T ss_dssp HHHHTTC-
T ss_pred HHcccccc
Confidence 65555554
No 101
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=61.56 E-value=43 Score=24.66 Aligned_cols=70 Identities=6% Similarity=-0.109 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHHHhhcccCCCchHhHHHHHHHHH
Q 025828 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIAELDTLGEESYKDSTLIMQLLR 230 (247)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~a~~~ld~l~ee~~~d~~~ilqlLr 230 (247)
+.|...|++|+.+ .|.+| ...++.+..|+. +|+.++|+...++|+.- +.++-......+..++
T Consensus 80 ~~A~~~~~~al~~-----~p~~~---~a~~~~g~~~~~-~g~~~~A~~~~~~al~l--------~p~~~~~~~~~l~~~~ 142 (162)
T 3rkv_A 80 HEAEETSSEVLKR-----EETNE---KALFRRAKARIA-AWKLDEAEEDLKLLLRN--------HPAAASVVAREMKIVT 142 (162)
T ss_dssp HHHHHHHHHHHHH-----STTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH--------CGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCcch---HHHHHHHHHHHH-HhcHHHHHHHHHHHHhc--------CCCCHHHHHHHHHHHH
Confidence 5678888888765 45554 344555555554 79999998876665543 2222223455555555
Q ss_pred hhHhhhh
Q 025828 231 DNLTLWT 237 (247)
Q Consensus 231 dNl~~W~ 237 (247)
.-+..+.
T Consensus 143 ~~~~~~~ 149 (162)
T 3rkv_A 143 ERRAEKK 149 (162)
T ss_dssp HHHHHHT
T ss_pred HHHHHHH
Confidence 5554443
No 102
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=60.41 E-value=73 Score=26.49 Aligned_cols=54 Identities=9% Similarity=-0.024 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcch-hhHhhhHHHHHHHHhCCHHHHHHHHHHHHHHH
Q 025828 150 AENTMLSYKAAQDIALTDLAPTHPIR-LGLALNFSVFYYEILNSSEKACTMAKQAFEEA 207 (247)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~p~r-LgL~LN~SVF~yei~~~~~~A~~iak~afd~a 207 (247)
.+.|...|++|+++... . .+|.. .....|.+.+|.. +|+.++|+...++|+.-.
T Consensus 131 ~~~A~~~~~~Al~~~~~-~--~~~~~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~~~ 185 (307)
T 2ifu_A 131 LSKAVHLYQQAAAVFEN-E--ERLRQAAELIGKASRLLVR-QQKFDEAAASLQKEKSMY 185 (307)
T ss_dssp HHHHHHHHHHHHHHHHH-T--TCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh-C--CChhHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHH
Confidence 46789999999998864 1 12333 3345566766665 799999999888887654
No 103
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=60.22 E-value=25 Score=26.23 Aligned_cols=46 Identities=13% Similarity=0.039 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025828 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (247)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (247)
+.|..+|++|+.+ .|.||. ..+|.++.|+. +|+.++|+...++|+.
T Consensus 72 ~~A~~~~~~al~l-----~p~~~~---~~~~lg~~~~~-~g~~~~A~~~~~~al~ 117 (148)
T 2vgx_A 72 DLAIHSYSYGAVM-----DIXEPR---FPFHAAECLLQ-XGELAEAESGLFLAQE 117 (148)
T ss_dssp HHHHHHHHHHHHH-----STTCTH---HHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCCCch---HHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 6689999999864 456653 34666666665 7999999876666554
No 104
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=59.68 E-value=27 Score=23.24 Aligned_cols=45 Identities=13% Similarity=0.008 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHH
Q 025828 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAF 204 (247)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~af 204 (247)
+.|...|++|+.+ .|.+| ....+.+..++ .+|+.++|+...++++
T Consensus 55 ~~A~~~~~~~~~~-----~~~~~---~~~~~~a~~~~-~~~~~~~A~~~~~~~~ 99 (118)
T 1elw_A 55 QKAYEDGCKTVDL-----KPDWG---KGYSRKAAALE-FLNRFEEAKRTYEEGL 99 (118)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CcccH---HHHHHHHHHHH-HHhhHHHHHHHHHHHH
Confidence 5677888888764 34443 34556665555 4799999988766654
No 105
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=58.97 E-value=27 Score=29.02 Aligned_cols=53 Identities=13% Similarity=-0.022 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHHH
Q 025828 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEE 206 (247)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~ 206 (247)
+.|.++|++|+++... +. +|...+.+++-.-..|.-+|++++|+...++|+.-
T Consensus 54 ~~A~~~~~~al~~~~~-~~--~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l 106 (292)
T 1qqe_A 54 NLAGDSFLKAADYQKK-AG--NEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQI 106 (292)
T ss_dssp HHHHHHHHHHHHHHHH-TT--CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-hC--CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 6789999999998753 32 45555556665555666689999999988887654
No 106
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=58.93 E-value=34 Score=23.14 Aligned_cols=47 Identities=19% Similarity=0.113 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHHH
Q 025828 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEE 206 (247)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~ 206 (247)
+.|.+.|++|+.+ .|.+| ....+.+..++ .+|+.++|+...++++..
T Consensus 63 ~~A~~~~~~~~~~-----~~~~~---~~~~~~~~~~~-~~~~~~~A~~~~~~~~~~ 109 (131)
T 2vyi_A 63 AGAVQDCERAICI-----DPAYS---KAYGRMGLALS-SLNKHVEAVAYYKKALEL 109 (131)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CccCH---HHHHHHHHHHH-HhCCHHHHHHHHHHHHhc
Confidence 5678888888764 34443 33455555555 479999999887776653
No 107
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=58.82 E-value=35 Score=22.59 Aligned_cols=48 Identities=19% Similarity=0.203 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHHH
Q 025828 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEE 206 (247)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~ 206 (247)
.+.|...|++|+.. .|.+| ....+.+..++. .|+.++|+...++++..
T Consensus 20 ~~~A~~~~~~~~~~-----~~~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~~~~~ 67 (118)
T 1elw_A 20 IDDALQCYSEAIKL-----DPHNH---VLYSNRSAAYAK-KGDYQKAYEDGCKTVDL 67 (118)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-----CCCcH---HHHHHHHHHHHh-hccHHHHHHHHHHHHHh
Confidence 35678888888764 34443 344555555554 79999999988887653
No 108
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=58.67 E-value=34 Score=23.10 Aligned_cols=47 Identities=19% Similarity=0.176 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHHH
Q 025828 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEE 206 (247)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~ 206 (247)
+.|...|++|+.. .|.+| ....+.+..++. .|+.++|+....+++..
T Consensus 29 ~~A~~~~~~~~~~-----~~~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~~~~~ 75 (131)
T 2vyi_A 29 EAAVHFYGKAIEL-----NPANA---VYFCNRAAAYSK-LGNYAGAVQDCERAICI 75 (131)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHc-----CCCCH---HHHHHHHHHHHH-hhchHHHHHHHHHHHhc
Confidence 5678888888764 23332 344555555554 79999999998888763
No 109
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=58.37 E-value=11 Score=33.31 Aligned_cols=55 Identities=18% Similarity=0.179 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHHHHHhhc--------CCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025828 150 AENTMLSYKAAQDIALTD--------LAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (247)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~--------L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (247)
-+.|...|++|+.+.... ....+|....+.+|.+..|+. +|+.++|+..+++|+.
T Consensus 239 ~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~g~~~~A~~~~~~al~ 301 (370)
T 1ihg_A 239 WEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLK-MSDWQGAVDSCLEALE 301 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHh-ccCHHHHHHHHHHHHH
Confidence 356888999998865431 111567777888888888875 7999999998888764
No 110
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=57.33 E-value=33 Score=24.68 Aligned_cols=46 Identities=7% Similarity=-0.135 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025828 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (247)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (247)
+.|...|++|+.+ .|.+| ....+.+..++. +|+.++|+...++++.
T Consensus 64 ~~A~~~~~~a~~~-----~~~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~a~~ 109 (166)
T 1a17_A 64 GYALGDATRAIEL-----DKKYI---KGYYRRAASNMA-LGKFRAALRDYETVVK 109 (166)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CcccH---HHHHHHHHHHHH-hccHHHHHHHHHHHHH
Confidence 5678888888865 33443 344555655554 7999999988777764
No 111
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=56.63 E-value=22 Score=27.23 Aligned_cols=47 Identities=11% Similarity=0.015 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025828 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (247)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (247)
-+.|..+|++|+.+ .|.+|. ...|.++.|.. +|+.++|+..-++|+.
T Consensus 86 ~~~Ai~~~~~al~l-----~P~~~~---~~~~lg~~~~~-lg~~~eA~~~~~~al~ 132 (151)
T 3gyz_A 86 FQQAADLYAVAFAL-----GKNDYT---PVFHTGQCQLR-LKAPLKAKECFELVIQ 132 (151)
T ss_dssp HHHHHHHHHHHHHH-----SSSCCH---HHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhh-----CCCCcH---HHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 46789999999864 466663 45566766664 8999999886666554
No 112
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=56.34 E-value=37 Score=23.85 Aligned_cols=46 Identities=9% Similarity=-0.050 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025828 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (247)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (247)
+.|...|++|+.+ .|.+| ....+.+..++. +|+.++|+...++++.
T Consensus 82 ~~A~~~~~~~~~~-----~~~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~al~ 127 (148)
T 2dba_A 82 DKAETEASKAIEK-----DGGDV---KALYRRSQALEK-LGRLDQAVLDLQRCVS 127 (148)
T ss_dssp HHHHHHHHHHHHH-----TSCCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhh-----CccCH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 5678888888765 34443 344566665554 7999999887776654
No 113
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=56.27 E-value=37 Score=26.02 Aligned_cols=49 Identities=22% Similarity=0.329 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCc-------------chhhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025828 151 ENTMLSYKAAQDIALTDLAPTHP-------------IRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (247)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p-------------~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (247)
+.|...|++|+.+. |.+| +...+..|.+..++. +|+.++|+....+|+.
T Consensus 55 ~~A~~~~~~al~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~~al~ 116 (198)
T 2fbn_A 55 NEAIVKYKEALDFF-----IHTEEWDDQILLDKKKNIEISCNLNLATCYNK-NKDYPKAIDHASKVLK 116 (198)
T ss_dssp HHHHHHHHHHHHTT-----TTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-----hcccccchhhHHHHHHHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHH
Confidence 45777888887643 3333 123456667776665 7999999988887765
No 114
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=55.86 E-value=54 Score=23.59 Aligned_cols=58 Identities=17% Similarity=0.246 Sum_probs=35.9
Q ss_pred hHHHHHHHHHHhcChHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHH
Q 025828 8 QYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISS 70 (247)
Q Consensus 8 ~~~~~Aklaeq~ery~dm~~~mk~ii~~~~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~ 70 (247)
-+..++.+..+.|+|++++..++++++ .. +. +..-...++.+|- ..+....+...+..
T Consensus 10 ~~~~~~~~~~~~~~~~~A~~~~~~~~~--~~-~~-~~~~~~~~~~~~~-~~~~~~~A~~~~~~ 67 (186)
T 3as5_A 10 YYRDKGISHAKAGRYSQAVMLLEQVYD--AD-AF-DVDVALHLGIAYV-KTGAVDRGTELLER 67 (186)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHTTTCC--TT-SC-CHHHHHHHHHHHH-HTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHH--hC-cc-ChHHHHHHHHHHH-HcCCHHHHHHHHHH
Confidence 345678888889999999999998886 32 32 3444444444443 23444555555543
No 115
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=55.72 E-value=35 Score=25.32 Aligned_cols=46 Identities=11% Similarity=0.151 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025828 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (247)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (247)
+.|.+.|++|+++ .|.|| ....+.+..|+ .+|+.++|+..-++|++
T Consensus 48 ~~A~~~~~~al~~-----~p~~~---~a~~~lg~~~~-~~~~~~~A~~~~~~al~ 93 (150)
T 4ga2_A 48 DLAKKYICTYINV-----QERDP---KAHRFLGLLYE-LEENTDKAVECYRRSVE 93 (150)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHH-HcCchHHHHHHHHHHHH
Confidence 6788888888864 45554 23344454444 47999999887777654
No 116
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=54.51 E-value=45 Score=22.23 Aligned_cols=46 Identities=20% Similarity=0.367 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025828 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (247)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (247)
+.|.+.|++|+.. .|.+| ....+.+..++. .|+.++|+...++++.
T Consensus 26 ~~A~~~~~~~~~~-----~~~~~---~~~~~la~~~~~-~~~~~~A~~~~~~~~~ 71 (125)
T 1na0_A 26 DEAIEYYQKALEL-----DPNNA---EAWYNLGNAYYK-QGDYDEAIEYYQKALE 71 (125)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----CcCcH---HHHHHHHHHHHH-hCCHHHHHHHHHHHHH
Confidence 4566666666643 22222 223344444443 5777777776666554
No 117
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=53.75 E-value=41 Score=24.11 Aligned_cols=47 Identities=26% Similarity=0.200 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025828 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (247)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (247)
.+.|...|++|+.+. |.+ ..+..+.+..++. +|+.++|+...++++.
T Consensus 29 ~~~A~~~~~~al~~~-----~~~---~~~~~~~a~~~~~-~~~~~~A~~~~~~a~~ 75 (166)
T 1a17_A 29 YENAIKFYSQAIELN-----PSN---AIYYGNRSLAYLR-TECYGYALGDATRAIE 75 (166)
T ss_dssp HHHHHHHHHHHHHHS-----TTC---HHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhC-----CCC---hHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 356788888888642 333 3445556665554 7999999998888765
No 118
>3caz_A BAR protein; thermo-acidophilic RED ALGA, protein structure initiative, PSI, center for eukaryotic structural genomics, signaling protein; 3.34A {Galdieria sulphuraria}
Probab=53.15 E-value=99 Score=25.76 Aligned_cols=112 Identities=19% Similarity=0.278 Sum_probs=62.4
Q ss_pred HHHHHHHHhcChHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhhhhhcchhhhhHHHHHH
Q 025828 11 YLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKDY 90 (247)
Q Consensus 11 ~~Aklaeq~ery~dm~~~mk~ii~~~~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~~i~~y 90 (247)
..|+|.+...+|--||+-+|.-.. +..|..|.=.-||=-+.. ++.+. +.+.++..=+..
T Consensus 99 eiarllekiqkyfQ~IEtlK~ql~--------nf~e~RLiYDHYKlKvdE----------LEK~~---KdSeKI~RNQsK 157 (294)
T 3caz_A 99 EIARLLEKIQKYRQEIEEIKKEYK--------ETDKYRERYDHYKVKLDN----------LEKKN---KDQERIERNQQK 157 (294)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHH----------HHHHT---CCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh--------hhHHHHHHHHHHHHhHHH----------HHhcc---chHHHHHHhHHH
Confidence 357788888888888877755331 123555655666654443 23221 122222222222
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhHHhhhccccccchhhcccchhHHHHHHHHHHHHHHHHHHHhh
Q 025828 91 RSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALT 166 (247)
Q Consensus 91 k~ki~~EL~~~C~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~ 166 (247)
-.+-+.--..+|-|+|+-.+ ++-|.|||.++|..+. +=...--|-+|++.|..
T Consensus 158 LssAEtaYkqvcsDiInkMn-----------------kll~n~~riineaasa------vwstqlqyakaleaaan 210 (294)
T 3caz_A 158 FKDAEAAYSSVCADLIQKME-----------------TVWKKHVSIFAEAASA------VWSTQLQYAKALEAAAN 210 (294)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHG
T ss_pred hhhHHHHHHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHhcC
Confidence 23334445667777776655 4567888888886653 22234457788887744
No 119
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=52.87 E-value=20 Score=25.27 Aligned_cols=28 Identities=14% Similarity=0.086 Sum_probs=22.1
Q ss_pred HhHHHHHHHHHHhcChHHHHHHHHHHhh
Q 025828 7 EQYVYLAKLAEQAERYEEMVKFMDSLVT 34 (247)
Q Consensus 7 e~~~~~Aklaeq~ery~dm~~~mk~ii~ 34 (247)
.-+++++.++.+.|+|++++.+..++++
T Consensus 44 rA~~~lg~~~~~~g~y~~Ai~~w~~~l~ 71 (93)
T 3bee_A 44 AALSLIANDHFISFRFQEAIDTWVLLLD 71 (93)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 3567778888888888888888888876
No 120
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=52.55 E-value=41 Score=25.00 Aligned_cols=46 Identities=7% Similarity=0.011 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025828 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (247)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (247)
+.|...|++|+.+ .|.+| ....+.+..++. .|+.++|+...++++.
T Consensus 98 ~~A~~~~~~al~~-----~p~~~---~~~~~la~~~~~-~g~~~~A~~~~~~al~ 143 (177)
T 2e2e_A 98 AQTRAMIDKALAL-----DSNEI---TALMLLASDAFM-QANYAQAIELWQKVMD 143 (177)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCcH---HHHHHHHHHHHH-cccHHHHHHHHHHHHh
Confidence 5678888888864 34443 445566666665 7999999887766654
No 121
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=52.28 E-value=49 Score=22.02 Aligned_cols=47 Identities=19% Similarity=0.344 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025828 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (247)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (247)
.+.|...|++++.. .|.+| ....+.+..++. .|+.++|+...+++++
T Consensus 59 ~~~A~~~~~~~~~~-----~~~~~---~~~~~la~~~~~-~~~~~~A~~~~~~~~~ 105 (125)
T 1na0_A 59 YDEAIEYYQKALEL-----DPNNA---EAWYNLGNAYYK-QGDYDEAIEYYQKALE 105 (125)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----CCccH---HHHHHHHHHHHH-hcCHHHHHHHHHHHHH
Confidence 35677888888764 33443 334556666654 7999999887777664
No 122
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=51.58 E-value=56 Score=25.63 Aligned_cols=47 Identities=13% Similarity=0.105 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025828 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (247)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (247)
.+.|...|++|+.+ .|.+| ....+.+..++. +|+.++|+...++++.
T Consensus 93 ~~~A~~~~~~al~~-----~~~~~---~~~~~la~~~~~-~g~~~~A~~~~~~a~~ 139 (275)
T 1xnf_A 93 FDAAYEAFDSVLEL-----DPTYN---YAHLNRGIALYY-GGRDKLAQDDLLAFYQ 139 (275)
T ss_dssp HHHHHHHHHHHHHH-----CTTCT---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc-----Ccccc---HHHHHHHHHHHH-hccHHHHHHHHHHHHH
Confidence 45677788887764 34443 333444444444 7999999888888765
No 123
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=51.47 E-value=42 Score=25.68 Aligned_cols=46 Identities=11% Similarity=-0.020 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025828 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (247)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (247)
+.|...|++|+.+ .|.+ ....++.+..|+. +|+.++|+...++|+.
T Consensus 105 ~~A~~~~~~al~~-----~p~~---~~~~~~lg~~~~~-~~~~~~A~~~~~~al~ 150 (198)
T 2fbn_A 105 PKAIDHASKVLKI-----DKNN---VKALYKLGVANMY-FGFLEEAKENLYKAAS 150 (198)
T ss_dssp HHHHHHHHHHHHH-----STTC---HHHHHHHHHHHHH-HTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----Cccc---HHHHHHHHHHHHH-cccHHHHHHHHHHHHH
Confidence 5678888888875 3333 3445666666654 7999999887776654
No 124
>4gfq_A Ribosome-recycling factor; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.65A {Bacillus anthracis}
Probab=51.18 E-value=46 Score=27.84 Aligned_cols=73 Identities=16% Similarity=0.121 Sum_probs=44.1
Q ss_pred CCCCHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhhhhhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 025828 40 TELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHL 113 (247)
Q Consensus 40 ~~L~~eERnLls~ayKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~~i~~yk~ki~~EL~~~C~eii~lid~~L 113 (247)
|+||.|-|.=|....|...-.-|.|.|.+..-..+.- +.......+-++-.++.++++..+.+..+.-||..+
T Consensus 127 P~LTeErRkelvK~ak~~~E~aKvaIRniRrda~~~l-Kk~~K~~~isEDe~k~~e~eiQklTd~~i~~iD~~l 199 (209)
T 4gfq_A 127 PALTEERRRDLVKVVKKYAEEAKVAVRNVRRDGNDDL-KKLEKAGEITEDDLRGYTEDIQKETDKYIAKVDEIA 199 (209)
T ss_dssp CBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999999999999999888888888752111100 000000011233444556666666666666666543
No 125
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=50.92 E-value=26 Score=31.65 Aligned_cols=54 Identities=17% Similarity=0.182 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHHHHhhcCCC--------CCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025828 150 AENTMLSYKAAQDIALTDLAP--------THPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (247)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~p--------t~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (247)
-+.|...|++|+.+... .+. .+|.+..+.+|.+..|+. +|+.++|+....+|+.
T Consensus 284 ~~~A~~~y~~Al~~~p~-~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~g~~~~A~~~~~~al~ 345 (457)
T 1kt0_A 284 YMQAVIQYGKIVSWLEM-EYGLSEKESKASESFLLAAFLNLAMCYLK-LREYTKAVECCDKALG 345 (457)
T ss_dssp HHHHHHHHHHHHHHHTT-CCSCCHHHHHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcc-cccCChHHHHHHHHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHh
Confidence 35688899999876532 110 234667788888888876 7999999998888754
No 126
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=50.81 E-value=43 Score=25.48 Aligned_cols=47 Identities=11% Similarity=0.107 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025828 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (247)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (247)
.+.|...|++|+.+ .|.+| ....|.+..++. +|+.++|+...++|+.
T Consensus 53 ~~~A~~~~~~al~~-----~~~~~---~~~~~lg~~~~~-~~~~~~A~~~~~~al~ 99 (213)
T 1hh8_A 53 MTEAEKAFTRSINR-----DKHLA---VAYFQRGMLYYQ-TEKYDLAIKDLKEALI 99 (213)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----Cccch---HHHHHHHHHHHH-cccHHHHHHHHHHHHH
Confidence 36688899999875 23443 445666666665 7999999998888776
No 127
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=50.52 E-value=15 Score=31.73 Aligned_cols=54 Identities=20% Similarity=0.284 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHHhhcC-------CCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025828 151 ENTMLSYKAAQDIALTDL-------APTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (247)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L-------~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (247)
+.|..+|++|+.+....- ...+|.+..+.+|.+..|+. +|+.++|+...++|+.
T Consensus 164 ~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~g~~~~A~~~~~~al~ 224 (336)
T 1p5q_A 164 KQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLK-LQAFSAAIESCNKALE 224 (336)
T ss_dssp HHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 557777777776542110 00124445666777776665 6888888777776643
No 128
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=50.06 E-value=43 Score=26.13 Aligned_cols=29 Identities=10% Similarity=0.174 Sum_probs=25.8
Q ss_pred HHhHHHHHHHHHHhcChHHHHHHHHHHhh
Q 025828 6 REQYVYLAKLAEQAERYEEMVKFMDSLVT 34 (247)
Q Consensus 6 re~~~~~Aklaeq~ery~dm~~~mk~ii~ 34 (247)
-+.++..+...-+.|+|++++.++.+++.
T Consensus 4 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~ 32 (208)
T 3urz_A 4 VDEMLQKVSAAIEAGQNGQAVSYFRQTIA 32 (208)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 46778889999999999999999999987
No 129
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=49.74 E-value=24 Score=24.26 Aligned_cols=46 Identities=20% Similarity=0.186 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025828 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (247)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (247)
+.|...|++|+. +.|.+ .....+.+..++. .|+.++|+...++++.
T Consensus 33 ~~A~~~~~~al~-----~~~~~---~~~~~~la~~~~~-~~~~~~A~~~~~~a~~ 78 (133)
T 2lni_A 33 PQAMKHYTEAIK-----RNPKD---AKLYSNRAACYTK-LLEFQLALKDCEECIQ 78 (133)
T ss_dssp HHHHHHHHHHHT-----TCTTC---HHHHHHHHHHHTT-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----cCCCc---HHHHHHHHHHHHH-hccHHHHHHHHHHHHH
Confidence 557788888874 33444 3344555655544 7999999998888765
No 130
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=49.31 E-value=60 Score=22.19 Aligned_cols=49 Identities=14% Similarity=0.023 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHHHH
Q 025828 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEA 207 (247)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~a 207 (247)
.+.|...|++|+.+ .|.++ ....+.+..+.. +|+.++|+...++|+...
T Consensus 35 ~~~A~~~~~~al~~-----~p~~~---~~~~~la~~~~~-~g~~~~A~~~~~~al~~~ 83 (115)
T 2kat_A 35 FDAALPHLRAALDF-----DPTYS---VAWKWLGKTLQG-QGDRAGARQAWESGLAAA 83 (115)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-----CCCcH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHHhc
Confidence 35688899998864 34443 334555655554 799999999888877654
No 131
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=49.20 E-value=90 Score=24.17 Aligned_cols=61 Identities=7% Similarity=-0.055 Sum_probs=41.5
Q ss_pred HhHHHHHHHHHHhcChHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHHHh
Q 025828 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIE 72 (247)
Q Consensus 7 e~~~~~Aklaeq~ery~dm~~~mk~ii~~~~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~ie 72 (247)
.-+..+|.+..+.|+|++++.+++++++ .. +. +..-...+..+|-. .+....+.+.+....
T Consensus 72 ~~~~~la~~~~~~~~~~~A~~~~~~a~~--~~-~~-~~~~~~~la~~~~~-~g~~~~A~~~~~~~~ 132 (252)
T 2ho1_A 72 DAHAALAVVFQTEMEPKLADEEYRKALA--SD-SR-NARVLNNYGGFLYE-QKRYEEAYQRLLEAS 132 (252)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH--HC-TT-CHHHHHHHHHHHHH-TTCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHH--HC-cC-cHHHHHHHHHHHHH-HhHHHHHHHHHHHHH
Confidence 4556789999999999999999999997 32 43 44555555555543 455566666665443
No 132
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=47.73 E-value=83 Score=23.34 Aligned_cols=57 Identities=9% Similarity=-0.124 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Q 025828 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIA 209 (247)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~a~~ 209 (247)
.+.|...|++|+.++.. . .+|...+.++..-...|.-.|+.++|+...++|++-+-.
T Consensus 123 ~~~A~~~~~~al~~~~~-~--~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 179 (203)
T 3gw4_A 123 LAGARQEYEKSLVYAQQ-A--DDQVAIACAFRGLGDLAQQEKNLLEAQQHWLRARDIFAE 179 (203)
T ss_dssp HHHHHHHHHHHHHHHHH-T--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh-c--cchHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHH
Confidence 45789999999998853 2 345555555555555555689999999988887776543
No 133
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=47.16 E-value=59 Score=23.38 Aligned_cols=47 Identities=13% Similarity=0.083 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHHH
Q 025828 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEE 206 (247)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~ 206 (247)
+.|.+.|+++... .|.+| ....+.+..++. .|+.++|+...++++..
T Consensus 93 ~~A~~~~~~~~~~-----~~~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~~~~~ 139 (186)
T 3as5_A 93 DLAVPLLIKVAEA-----NPINF---NVRFRLGVALDN-LGRFDEAIDSFKIALGL 139 (186)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CcHhH---HHHHHHHHHHHH-cCcHHHHHHHHHHHHhc
Confidence 5677788887764 23333 334555555554 79999999988887654
No 134
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=46.71 E-value=40 Score=30.78 Aligned_cols=15 Identities=13% Similarity=-0.028 Sum_probs=7.1
Q ss_pred hCCHHHHHHHHHHHH
Q 025828 190 LNSSEKACTMAKQAF 204 (247)
Q Consensus 190 ~~~~~~A~~iak~af 204 (247)
+|+.++|+...++|+
T Consensus 87 ~g~~~eA~~~~~~al 101 (477)
T 1wao_1 87 LGKFRAALRDYETVV 101 (477)
T ss_dssp HTCHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHH
Confidence 455555544444433
No 135
>1dd5_A Ribosome recycling factor; three-helix bundle, beta-alpha-beta sandwich; 2.55A {Thermotoga maritima} SCOP: d.67.3.1 PDB: 1t1m_C
Probab=46.56 E-value=69 Score=26.19 Aligned_cols=74 Identities=18% Similarity=0.210 Sum_probs=44.1
Q ss_pred CCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhhhhhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 025828 39 ATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHL 113 (247)
Q Consensus 39 ~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~~i~~yk~ki~~EL~~~C~eii~lid~~L 113 (247)
.|+||.|-|.=|....|...-..|.+.|.+..-..+.- ++.......-++-.++.++++..+.+..+.-||..+
T Consensus 102 iP~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~l-Kk~~K~~~iseD~~k~~e~~iQkltd~~i~~id~~~ 175 (185)
T 1dd5_A 102 FPSPTTEQREKWVKKAKEIVEEGKIAIRNIRREILKKI-KEDQKEGLIPEDDAKRLENEIQKLTDEFIEKLDEVF 175 (185)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 37899999999999999999888888888742111100 000000012234444556666666666666665543
No 136
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=46.43 E-value=58 Score=24.69 Aligned_cols=47 Identities=11% Similarity=0.064 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025828 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (247)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (247)
-+.|...|++|+.+ .|.||. ...|.++.|+. +|+.++|+..-++|+.
T Consensus 52 ~~eA~~~~~~al~~-----~P~~~~---~~~~lg~~~~~-~g~~~~Ai~~~~~al~ 98 (151)
T 3gyz_A 52 IEEAEVFFRFLCIY-----DFYNVD---YIMGLAAIYQI-KEQFQQAADLYAVAFA 98 (151)
T ss_dssp HHHHHHHHHHHHHH-----CTTCHH---HHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----CCCCHH---HHHHHHHHHHH-HccHHHHHHHHHHHHh
Confidence 36688888888754 566654 34555665554 7999999987766643
No 137
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=45.53 E-value=74 Score=22.11 Aligned_cols=53 Identities=17% Similarity=0.040 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025828 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (247)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (247)
..|..-|+.|+......-. ..+.+-.+..++++-+| .+|+.++|+...++|+.
T Consensus 22 ~~A~~W~~~Al~~~~~~~~-~~~~~~~i~~~L~~~~~-~~g~~~~A~~~~~~al~ 74 (104)
T 2v5f_A 22 YHTELWMEQALRQLDEGEI-STIDKVSVLDYLSYAVY-QQGDLDKALLLTKKLLE 74 (104)
T ss_dssp HHHHHHHHHHHHHHHTTCC-CSSCHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhccCC-CcccHHHHHHHHHHHHH-HccCHHHHHHHHHHHHh
Confidence 5577888888877642211 12334444455555555 58999999998888764
No 138
>1ise_A Ribosome recycling factor; translation; 2.20A {Escherichia coli} SCOP: d.67.3.1 PDB: 1ek8_A* 1zn0_A 1zn1_A 2rdo_8
Probab=44.97 E-value=72 Score=26.07 Aligned_cols=73 Identities=14% Similarity=0.171 Sum_probs=43.0
Q ss_pred CCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhhhhhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 025828 39 ATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSH 112 (247)
Q Consensus 39 ~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~~i~~yk~ki~~EL~~~C~eii~lid~~ 112 (247)
.|+||.|-|.=|....|...-..|.+.|.+..-..+.- ++......+-++-.++.++++..+.+..+.-||..
T Consensus 102 iP~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~l-Kk~~K~~~iseD~~k~~e~~iQkltd~~i~~id~~ 174 (185)
T 1ise_A 102 LPPLTEERRKDLTKIVRGEAEQARVAVRNVGRDANDKV-KALLKDKEISEDDDRRSQDDVQKLTDAAIKKIEAA 174 (185)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHSSSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhhcCCCChhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 37899999999999999998888888888842111000 00000001123444455566666666666555543
No 139
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=44.88 E-value=1.1e+02 Score=23.90 Aligned_cols=65 Identities=15% Similarity=0.110 Sum_probs=37.2
Q ss_pred HhHHHHHHHHHHhcChHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHHHhh
Q 025828 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQ 73 (247)
Q Consensus 7 e~~~~~Aklaeq~ery~dm~~~mk~ii~~~~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~ieq 73 (247)
+.+..+|...-+.|+|++++..+++++... ...++..+-...+..+|-. .+....|...+..+.+
T Consensus 5 ~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~-p~~~~~~~a~~~lg~~~~~-~~~~~~A~~~~~~~l~ 69 (225)
T 2yhc_A 5 NEIYATAQQKLQDGNWRQAITQLEALDNRY-PFGPYSQQVQLDLIYAYYK-NADLPLAQAAIDRFIR 69 (225)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHC-TTSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHHHh-cCCHHHHHHHHHHHHH
Confidence 345567777777888888888888887621 1122334445555555532 3555555555555433
No 140
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=44.50 E-value=30 Score=24.78 Aligned_cols=47 Identities=9% Similarity=0.075 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025828 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (247)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (247)
.+.|..+|++|+++ .|.+| ....+.++.+.. +|+.++|+...++++.
T Consensus 67 ~~~A~~~~~~al~l-----~P~~~---~~~~~la~~~~~-~g~~~~A~~~~~~al~ 113 (121)
T 1hxi_A 67 DGLAIIALNHARML-----DPKDI---AVHAALAVSHTN-EHNANAALASLRAWLL 113 (121)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-HHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 36788999998864 45554 344556665554 6899998887776653
No 141
>1is1_A Ribosome recycling factor; translation; 2.20A {Vibrio parahaemolyticus} SCOP: d.67.3.1 PDB: 3r8n_Y
Probab=44.25 E-value=76 Score=25.90 Aligned_cols=73 Identities=19% Similarity=0.152 Sum_probs=43.3
Q ss_pred CCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhhhhhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 025828 39 ATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSH 112 (247)
Q Consensus 39 ~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~~i~~yk~ki~~EL~~~C~eii~lid~~ 112 (247)
.|+||.|-|.=|....|...-..|.+.|.+..-..+.- ++.......-++-.++.++++..+.+..+.-||..
T Consensus 102 iP~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~l-Kk~~K~~~iseD~~k~~e~~iQkltd~~i~~id~~ 174 (185)
T 1is1_A 102 LPPLTEERRKDLVKIVRGEAEGGRVAVRNIRRDANNDL-KALLKDKEISEDEDRKAQEEIQKLTDVAVKKIDEV 174 (185)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhhcCCCChhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 38899999999999999998888888888842111000 00000001123444455566666666666666544
No 142
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=44.08 E-value=1.7e+02 Score=25.79 Aligned_cols=58 Identities=17% Similarity=0.264 Sum_probs=38.7
Q ss_pred HhHHHHHHHHHHhcChHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhhhhhh-hhhHHHHHH
Q 025828 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGS-LRAAWRIIS 69 (247)
Q Consensus 7 e~~~~~Aklaeq~ery~dm~~~mk~ii~~~~~~~~L~~eERnLls~ayKn~i~~-~R~s~R~l~ 69 (247)
+-+.+++.+....|+|++++....+++. .+ |. +.+=.+.+..+|... +. ...+...+.
T Consensus 98 ~a~~~lg~~~~~~g~~~~Al~~~~~al~--l~-P~-~~~a~~~~g~~l~~~-g~d~~eAl~~~~ 156 (382)
T 2h6f_A 98 DVYDYFRAVLQRDERSERAFKLTRDAIE--LN-AA-NYTVWHFRRVLLKSL-QKDLHEEMNYIT 156 (382)
T ss_dssp HHHHHHHHHHHHTCCCHHHHHHHHHHHH--HC-TT-CHHHHHHHHHHHHHT-TCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCChHHHHHHHHHHHH--hC-cc-CHHHHHHHHHHHHHc-ccCHHHHHHHHH
Confidence 4456788888889999999999999997 43 44 344455555555443 32 445555554
No 143
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=43.81 E-value=28 Score=31.53 Aligned_cols=53 Identities=9% Similarity=0.028 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHHHHHHhh
Q 025828 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEAIAEL 211 (247)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~a~~~l 211 (247)
.+.|...|++|+.. +| ...+-+.|.-|..+..|+.+.|.+.+.++|+.|+..+
T Consensus 62 ~~~a~~~~~ral~~--------~p-~~~lw~~~~~~~~~~~~~~~~a~~~~~~~~~~al~~~ 114 (530)
T 2ooe_A 62 YDKVEKLFQRCLMK--------VL-HIDLWKCYLSYVRETKGKLPSYKEKMAQAYDFALDKI 114 (530)
T ss_dssp HHHHHHHHHHHTTT--------CC-CHHHHHHHHHHHHHHTTTSTTHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhc--------CC-ChHHHHHHHHHHHHHccchhhHHHHHHHHHHHHHHHC
Confidence 46678888888742 23 3457888888999999999999999999999998753
No 144
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=43.58 E-value=38 Score=28.11 Aligned_cols=48 Identities=13% Similarity=0.030 Sum_probs=27.7
Q ss_pred HHHHHHHHHhh--cCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHHHH
Q 025828 156 SYKAAQDIALT--DLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEA 207 (247)
Q Consensus 156 aY~~A~~~a~~--~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~a 207 (247)
-|++|....+. .+.|.++ ....+.+..|+ -+|+.++|+...++|+.-.
T Consensus 53 ~~~~A~~~~~~al~~~p~~~---~~~~~lg~~~~-~~g~~~~A~~~~~~al~l~ 102 (281)
T 2c2l_A 53 QPEQALADCRRALELDGQSV---KAHFFLGQCQL-EMESYDEAIANLQRAYSLA 102 (281)
T ss_dssp CHHHHHHHHHHHTTSCTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCCH---HHHHHHHHHHH-HcCCHHHHHHHHHHHHHhC
Confidence 35555555543 3444443 34445555544 4788888888777777654
No 145
>1ge9_A Ribosome recycling factor; three-helix bundle; NMR {Aquifex aeolicus} SCOP: d.67.3.1
Probab=43.21 E-value=85 Score=25.62 Aligned_cols=71 Identities=14% Similarity=0.164 Sum_probs=45.7
Q ss_pred CCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhhhhhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 025828 39 ATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHL 113 (247)
Q Consensus 39 ~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~~i~~yk~ki~~EL~~~C~eii~lid~~L 113 (247)
.|+||.|-|.=|....|...-.-|.+.|.+..-..+.-.+. . +.-++-.++.++++..+.+..+.-||..+
T Consensus 104 iP~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~lKk~-~---kiseD~~k~~e~~iQkltd~~i~~id~~~ 174 (184)
T 1ge9_A 104 LPPLTEERRRELVRLLHKITEEARVRVRNVRREAKEMIEEL-E---GISEDEKKRALERLQKLTDKYIDEINKLM 174 (184)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-T---TCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-c---CCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 48999999999999999999888999888852111110010 0 12244455566666666666666666543
No 146
>1wqg_A Ribosome recycling factor; translation factor, triple-helix bundle, protein synthesis, translation; 2.15A {Mycobacterium tuberculosis} SCOP: d.67.3.1 PDB: 1wqf_A 1wqh_A
Probab=43.11 E-value=82 Score=25.73 Aligned_cols=69 Identities=17% Similarity=0.125 Sum_probs=42.4
Q ss_pred CCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHHHhh----hhhhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 025828 39 ATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQ----KEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSH 112 (247)
Q Consensus 39 ~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~ieq----k~~~~~~~~~~~~i~~yk~ki~~EL~~~C~eii~lid~~ 112 (247)
.|+||.|-|.=|..-.|...-..|.+.|.+..--. +.+..+ ..-++-.++.++++..+.+..+.-||..
T Consensus 102 iP~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~lKk~~K~~-----~iseD~~k~~e~~iQkltd~~i~~id~~ 174 (185)
T 1wqg_A 102 VPQLTEERRRELVKQAKHKGEEAKVSVRNIRRKAMEELHRIRKEG-----EAGEDEVGRAEKDLDKTTHQYVTQIDEL 174 (185)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC-----CCChhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 37899999999999999998888888888742111 111000 1123344455556665555555555543
No 147
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=42.30 E-value=75 Score=23.40 Aligned_cols=46 Identities=11% Similarity=-0.022 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025828 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (247)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (247)
+.|...|++|+. +.|.+|.- ..+.++.++. +|+.++|+...++|+.
T Consensus 38 ~~A~~~~~~al~-----~~p~~~~~---~~~lg~~~~~-~g~~~~A~~~~~~al~ 83 (148)
T 2vgx_A 38 EDAHXVFQALCV-----LDHYDSRF---FLGLGACRQA-MGQYDLAIHSYSYGAV 83 (148)
T ss_dssp HHHHHHHHHHHH-----HCTTCHHH---HHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----cCcccHHH---HHHHHHHHHH-HhhHHHHHHHHHHHHh
Confidence 567778887765 35566533 3455655554 7999999998887754
No 148
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=42.06 E-value=46 Score=25.29 Aligned_cols=54 Identities=13% Similarity=-0.018 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHHHHhhcC--------CCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHH
Q 025828 150 AENTMLSYKAAQDIALTDL--------APTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAF 204 (247)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L--------~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~af 204 (247)
.+.|...|++|+++...+- ...+|-......|.+..++. +|+.++|+...++|+
T Consensus 87 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al 148 (213)
T 1hh8_A 87 YDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAK-KEEWKKAEEQLALAT 148 (213)
T ss_dssp HHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHH-TTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHH-ccCHHHHHHHHHHHH
Confidence 3668889999886542100 00334445566777777665 799999988766654
No 149
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=41.46 E-value=40 Score=26.74 Aligned_cols=95 Identities=16% Similarity=0.169 Sum_probs=55.5
Q ss_pred ccccccchhhcccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCc---chhhHhhhHHHHH----HHHhCCHHHHHHHHHH
Q 025828 130 KGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHP---IRLGLALNFSVFY----YEILNSSEKACTMAKQ 202 (247)
Q Consensus 130 kgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~p---~rLgL~LN~SVF~----yei~~~~~~A~~iak~ 202 (247)
.|.-+.=+..+..+.+..+..+.|..+|++|+++ .|.++ ..||.++.---++ -+-.++.++|+.
T Consensus 42 ~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~l-----dP~~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~---- 112 (158)
T 1zu2_A 42 WGGVLLELSQFHSISDAKQMIQEAITKFEEALLI-----DPKKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQ---- 112 (158)
T ss_dssp HHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHH-----CTTCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH----
T ss_pred HHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHh-----CcCcHHHHHHHHHHHHHhcccCcchhhhhccHHHHHH----
Confidence 4445555566667777777899999999999875 45554 3355554322111 111245666665
Q ss_pred HHHHHHHhhcccCCCchHhHHHHHHHHHhhHhhhhc
Q 025828 203 AFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTS 238 (247)
Q Consensus 203 afd~a~~~ld~l~ee~~~d~~~ilqlLrdNl~~W~~ 238 (247)
+|+.|+. ++.+ +.+...-+++..++-.+|..
T Consensus 113 ~~~kAl~----l~P~-~~~y~~al~~~~ka~el~~~ 143 (158)
T 1zu2_A 113 FFQQAVD----EQPD-NTHYLKSLEMTAKAPQLHAE 143 (158)
T ss_dssp HHHHHHH----HCTT-CHHHHHHHHHHHTHHHHHHH
T ss_pred HHHHHHH----hCCC-CHHHHHHHHHHHhCHhccCc
Confidence 5666665 2222 23455666677777777753
No 150
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=41.38 E-value=76 Score=26.15 Aligned_cols=53 Identities=21% Similarity=-0.155 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHH-hCCHHHHHHHHHHHHHH
Q 025828 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEI-LNSSEKACTMAKQAFEE 206 (247)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei-~~~~~~A~~iak~afd~ 206 (247)
+.|..+|++|+++... + -+|...+-+++----.|.- +|++++|+..-++|++-
T Consensus 94 ~~A~~~~~~Al~l~~~-~--g~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~ 147 (292)
T 1qqe_A 94 VNAVDSLENAIQIFTH-R--GQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEW 147 (292)
T ss_dssp HHHHHHHHHHHHHHHH-T--TCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-c--CCHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHH
Confidence 6689999999998853 2 2344444444443334445 59999999988888764
No 151
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=41.17 E-value=89 Score=22.08 Aligned_cols=47 Identities=13% Similarity=0.044 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025828 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (247)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (247)
.+.|...|++|+.+ .|.+| ....+.++.+.. +|+.++|+...++|+.
T Consensus 33 ~~~A~~~~~~al~~-----~P~~~---~a~~~lg~~~~~-~g~~~~A~~~~~~al~ 79 (121)
T 1hxi_A 33 LAEAALAFEAVCQK-----EPERE---EAWRSLGLTQAE-NEKDGLAIIALNHARM 79 (121)
T ss_dssp HHHHHHHHHHHHHH-----STTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-----CCCCH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 35678888888763 34444 334455555554 7999999887666554
No 152
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=40.89 E-value=78 Score=21.08 Aligned_cols=46 Identities=20% Similarity=0.328 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025828 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (247)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (247)
+.|...|+++... .|.+| ....+.+..++ ..|+.++|+....+++.
T Consensus 52 ~~A~~~~~~~~~~-----~~~~~---~~~~~l~~~~~-~~~~~~~A~~~~~~~~~ 97 (136)
T 2fo7_A 52 DEAIEYYQKALEL-----DPRSA---EAWYNLGNAYY-KQGDYDEAIEYYQKALE 97 (136)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-TTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----CCCch---HHHHHHHHHHH-HhcCHHHHHHHHHHHHH
Confidence 5567777777654 23333 22334444444 47889988888777665
No 153
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=40.63 E-value=59 Score=26.99 Aligned_cols=47 Identities=6% Similarity=0.079 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025828 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (247)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (247)
.+.|..+|++|+... |.+ ..+.++++.|+.. .|+.++|+.+-.+|+.
T Consensus 185 ~~~A~~~~~~al~~~-----p~~---~~~~~~~~~~~~~-~g~~~~A~~~~~~al~ 231 (308)
T 2ond_A 185 KSVAFKIFELGLKKY-----GDI---PEYVLAYIDYLSH-LNEDNNTRVLFERVLT 231 (308)
T ss_dssp HHHHHHHHHHHHHHH-----TTC---HHHHHHHHHHHHT-TCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhC-----CCc---HHHHHHHHHHHHH-CCCHHHHHHHHHHHHh
Confidence 356788888888653 333 4566888877755 6888888776666554
No 154
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=40.40 E-value=1.1e+02 Score=22.43 Aligned_cols=26 Identities=8% Similarity=0.144 Sum_probs=13.4
Q ss_pred HHHHHHHHHHhcChHHHHHHHHHHhh
Q 025828 9 YVYLAKLAEQAERYEEMVKFMDSLVT 34 (247)
Q Consensus 9 ~~~~Aklaeq~ery~dm~~~mk~ii~ 34 (247)
+..++.+..+.|+|++++.++.+.++
T Consensus 14 ~~~~g~~~~~~g~~~~A~~~~~~al~ 39 (164)
T 3sz7_A 14 LKSEGNAAMARKEYSKAIDLYTQALS 39 (164)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 34445555555555555555555554
No 155
>1eh1_A Ribosome recycling factor; translation, hinge variability; 2.60A {Thermus thermophilus} SCOP: d.67.3.1 PDB: 2qbe_6 2qbg_6 2qbi_6* 2qbk_6* 2v46_Y* 2v48_Y* 2z4l_6* 2z4n_6* 3j0d_J 3j0e_G
Probab=40.18 E-value=73 Score=26.06 Aligned_cols=74 Identities=22% Similarity=0.204 Sum_probs=44.9
Q ss_pred CCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhhhhhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 025828 39 ATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHL 113 (247)
Q Consensus 39 ~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~~i~~yk~ki~~EL~~~C~eii~lid~~L 113 (247)
.|+||.|-|.=|....|...-.-|.+.|.+..-..+.- ++.......-++-.++.++++..+.+..+.-||..+
T Consensus 103 iP~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~l-Kk~~K~~~iseD~~k~~e~~iQkltd~~i~~id~~~ 176 (185)
T 1eh1_A 103 IPPLTEERRKDLVRAVRQYAEEGRVAIRNIRREALDKL-KKLAKELHLSEDETKRAEAEIQKITDEFIAKADQLA 176 (185)
T ss_dssp CCCCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 37899999999999999999888888888842111100 000000012234445566666666666666666543
No 156
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=39.23 E-value=1.4e+02 Score=23.56 Aligned_cols=63 Identities=21% Similarity=0.146 Sum_probs=44.8
Q ss_pred HHHHHHHHHhcChHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhhh---------hhhhhhHHHHHHHHhh
Q 025828 10 VYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNV---------IGSLRAAWRIISSIEQ 73 (247)
Q Consensus 10 ~~~Aklaeq~ery~dm~~~mk~ii~~~~~~~~L~~eERnLls~ayKn~---------i~~~R~s~R~l~~ieq 73 (247)
..+|.+..+.|+|++++..++++++.. .......+-...+..+|.+. .+....|...+..+..
T Consensus 152 ~~la~~~~~~g~~~~A~~~~~~~l~~~-p~~~~~~~a~~~l~~~~~~~g~~~~~~~~~~~~~~A~~~~~~~~~ 223 (261)
T 3qky_A 152 YEAARLYERRELYEAAAVTYEAVFDAY-PDTPWADDALVGAMRAYIAYAEQSVRARQPERYRRAVELYERLLQ 223 (261)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHC-TTSTTHHHHHHHHHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHHHC-CCCchHHHHHHHHHHHHHHhcccchhhcccchHHHHHHHHHHHHH
Confidence 678999999999999999999999732 11334566677778888755 2555666666655443
No 157
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=39.13 E-value=65 Score=23.71 Aligned_cols=26 Identities=27% Similarity=0.441 Sum_probs=24.1
Q ss_pred HHHHHHHHHHhcChHHHHHHHHHHhh
Q 025828 9 YVYLAKLAEQAERYEEMVKFMDSLVT 34 (247)
Q Consensus 9 ~~~~Aklaeq~ery~dm~~~mk~ii~ 34 (247)
...+|++..+.|+|++++++++++++
T Consensus 34 ~~~la~~y~~~~~~~~A~~~~~~al~ 59 (150)
T 4ga2_A 34 GFYFAKLYYEAKEYDLAKKYICTYIN 59 (150)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 46789999999999999999999998
No 158
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=38.26 E-value=1.4e+02 Score=23.25 Aligned_cols=49 Identities=10% Similarity=-0.115 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCC---HHHHHHHHHHHHHHH
Q 025828 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNS---SEKACTMAKQAFEEA 207 (247)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~---~~~A~~iak~afd~a 207 (247)
.+.|...|++|+++ .|.+| ...++.+..++ .+++ .++|+...+++++..
T Consensus 158 ~~~A~~~~~~a~~~-----~p~~~---~~~~~~~~~~~-~~~~~~~~~~A~~~~~~a~~~~ 209 (272)
T 3u4t_A 158 YVKADSSFVKVLEL-----KPNIY---IGYLWRARANA-AQDPDTKQGLAKPYYEKLIEVC 209 (272)
T ss_dssp HHHHHHHHHHHHHH-----STTCH---HHHHHHHHHHH-HHSTTCSSCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----Cccch---HHHHHHHHHHH-HcCcchhhHHHHHHHHHHHHHH
Confidence 45677777777754 34442 22223333333 3466 666666666555543
No 159
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=38.19 E-value=97 Score=21.38 Aligned_cols=11 Identities=9% Similarity=0.259 Sum_probs=5.4
Q ss_pred HHHHHHHHHHH
Q 025828 152 NTMLSYKAAQD 162 (247)
Q Consensus 152 ~a~~aY~~A~~ 162 (247)
.|...|++|+.
T Consensus 61 ~A~~~~~~al~ 71 (137)
T 3q49_B 61 QALADCRRALE 71 (137)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 34455555544
No 160
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=38.13 E-value=93 Score=21.14 Aligned_cols=60 Identities=12% Similarity=0.080 Sum_probs=42.5
Q ss_pred HHhHHHHHHHHHHhcChHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHH
Q 025828 6 REQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISS 70 (247)
Q Consensus 6 re~~~~~Aklaeq~ery~dm~~~mk~ii~~~~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~ 70 (247)
-.-+..++.+..+.|+|++++.++++++. .. |. ..+=...+..+|.. .+....+...+..
T Consensus 19 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~--~~-p~-~~~~~~~la~~~~~-~g~~~~A~~~~~~ 78 (115)
T 2kat_A 19 MLLRFTLGKTYAEHEQFDAALPHLRAALD--FD-PT-YSVAWKWLGKTLQG-QGDRAGARQAWES 78 (115)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH--HC-TT-CHHHHHHHHHHHHH-HTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHH--HC-CC-cHHHHHHHHHHHHH-cCCHHHHHHHHHH
Confidence 34566789999999999999999999997 43 43 35555666766654 3555566655543
No 161
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=37.63 E-value=84 Score=23.17 Aligned_cols=48 Identities=17% Similarity=0.288 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCH--HHHHHHHHHHHH
Q 025828 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSS--EKACTMAKQAFE 205 (247)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~--~~A~~iak~afd 205 (247)
.+.|..+|++|+.+. |.+| ....+.+..+|.-.|+. ++|+...++++.
T Consensus 60 ~~~A~~~~~~al~~~-----p~~~---~~~~~la~~l~~~~~~~~~~~A~~~~~~al~ 109 (177)
T 2e2e_A 60 YSNSLLAYRQALQLR-----GENA---ELYAALATVLYYQASQHMTAQTRAMIDKALA 109 (177)
T ss_dssp HHHHHHHHHHHHHHH-----CSCH---HHHHHHHHHHHHHTTTCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcC-----CCCH---HHHHHHHHHHHHhcCCcchHHHHHHHHHHHH
Confidence 367889999998764 3443 34556666655557887 999888777664
No 162
>2wh5_A Acyl-COA-binding domain-containing protein 4; alternative splicing, fatty acid metabolism, lipid transport, lipid binding protein; HET: STE ST9 COA; 2.60A {Homo sapiens}
Probab=37.42 E-value=59 Score=24.12 Aligned_cols=48 Identities=17% Similarity=0.230 Sum_probs=35.1
Q ss_pred cChHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhhhhh----------------hhhhHHHHHH
Q 025828 20 ERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIG----------------SLRAAWRIIS 69 (247)
Q Consensus 20 ery~dm~~~mk~ii~~~~~~~~L~~eERnLls~ayKn~i~----------------~~R~s~R~l~ 69 (247)
++|+.++++++.+-. .+...++.+++-.|-.-||.... .+..||..+.
T Consensus 10 ~~F~~A~~~vk~l~~--~g~~~ps~e~~L~LYaLyKQAt~Gd~~~~~Pg~~d~~~~aKw~AW~~l~ 73 (106)
T 2wh5_A 10 KQFQAAVSVIQNLPK--NGSYRPSYEEMLRFYSYYKQATMGPCLVPRPGFWDPIGRYKWDAWNSLG 73 (106)
T ss_dssp HHHHHHHHHHHHSCS--SCSCCCCHHHHHHHHHHHHHHHHCSCCSCCCCTTCHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHhccc--cCCCCCCHHHHHHHHHHHhhhccCCCCCCCCCcccHHHHHHHHHHHHhc
Confidence 678889999988653 22136899999999888988753 2567777764
No 163
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=37.27 E-value=2.1e+02 Score=25.07 Aligned_cols=48 Identities=10% Similarity=0.151 Sum_probs=29.4
Q ss_pred hHHHHHHHHHHhcChHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhhhhh
Q 025828 8 QYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIG 59 (247)
Q Consensus 8 ~~~~~Aklaeq~ery~dm~~~mk~ii~~~~~~~~L~~eERnLls~ayKn~i~ 59 (247)
-+..++.+..+.|+|++++.++.++++ .+ | =+..=.+-+..+|...-+
T Consensus 202 a~~~lg~~~~~~g~~~eAl~~~~~al~--l~-P-~~~~a~~~lg~~l~~l~~ 249 (382)
T 2h6f_A 202 AWQHRQWVIQEFKLWDNELQYVDQLLK--ED-V-RNNSVWNQRYFVISNTTG 249 (382)
T ss_dssp HHHHHHHHHHHHTCCTTHHHHHHHHHH--HC-T-TCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHH--hC-C-CCHHHHHHHHHHHHHhcC
Confidence 345667777777777777777777776 32 3 344555555555555433
No 164
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=37.09 E-value=1.7e+02 Score=23.97 Aligned_cols=51 Identities=16% Similarity=0.228 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025828 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (247)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (247)
.+.|...|++|+... .++|.++ ..+-.+|..|+.. .|+.+.|..+.++|.+
T Consensus 219 ~~~A~~~~~~al~~~--~l~p~~~--~~l~~~~~~~~~~-~g~~~~a~~~~~~a~~ 269 (308)
T 2ond_A 219 DNNTRVLFERVLTSG--SLPPEKS--GEIWARFLAFESN-IGDLASILKVEKRRFT 269 (308)
T ss_dssp HHHHHHHHHHHHHSS--SSCGGGC--HHHHHHHHHHHHH-HSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcc--CCCHHHH--HHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 467899999997531 3565433 4456777888776 6999999877666554
No 165
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=36.94 E-value=74 Score=24.59 Aligned_cols=47 Identities=6% Similarity=0.039 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025828 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (247)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (247)
-+.|...|++|+. +.|. ......+.+..|+. +|+.++|+...++++.
T Consensus 58 ~~~A~~~~~~al~-----~~p~---~~~~~~~l~~~~~~-~~~~~~A~~~~~~al~ 104 (228)
T 4i17_A 58 YKEAADYFDIAIK-----KNYN---LANAYIGKSAAYRD-MKNNQEYIATLTEGIK 104 (228)
T ss_dssp HHHHHHHHHHHHH-----TTCS---HHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----hCcc---hHHHHHHHHHHHHH-cccHHHHHHHHHHHHH
Confidence 3568888888874 3344 44455566666655 7999999998887765
No 166
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=36.43 E-value=93 Score=29.15 Aligned_cols=65 Identities=23% Similarity=0.341 Sum_probs=38.6
Q ss_pred ccccccchhhcccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCc---chhhHhhhH------HHHHHHH----hCCHHHH
Q 025828 130 KGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHP---IRLGLALNF------SVFYYEI----LNSSEKA 196 (247)
Q Consensus 130 kgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~p---~rLgL~LN~------SVF~yei----~~~~~~A 196 (247)
-||..||.... ..|...|.+|..+. |.+- ..||+.-.+ +||||-- ..-...|
T Consensus 158 LGDL~RY~~~~----------~~A~~~Y~~A~~~~-----P~~G~~~nqLavla~~~~~~l~a~y~y~rsl~~~~Pf~~a 222 (497)
T 1ya0_A 158 LGDIARYRNQT----------SQAESYYRHAAQLV-----PSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAA 222 (497)
T ss_dssp HHHHHHHTTCH----------HHHHHHHHHHHHHC-----TTBSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBCCHHH
T ss_pred cccHHHHHHHH----------HHHHHHHHHHHHhC-----CCCCchHHHHHHHHhcccccHHHHHHHHHHHhcCCCChhH
Confidence 79999999764 57899999998754 2221 466655544 5666641 1123334
Q ss_pred HHHHHHHHHHHHH
Q 025828 197 CTMAKQAFEEAIA 209 (247)
Q Consensus 197 ~~iak~afd~a~~ 209 (247)
..=....|+.+.+
T Consensus 223 ~~nL~~~f~~~~~ 235 (497)
T 1ya0_A 223 STNLQKALSKALE 235 (497)
T ss_dssp HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHh
Confidence 4444445555443
No 167
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=33.63 E-value=1.4e+02 Score=22.15 Aligned_cols=34 Identities=21% Similarity=0.101 Sum_probs=25.8
Q ss_pred HHhHHHHHHHHHHhcChHHHHHHHHHHhhccCCCCCC
Q 025828 6 REQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATEL 42 (247)
Q Consensus 6 re~~~~~Aklaeq~ery~dm~~~mk~ii~~~~~~~~L 42 (247)
-+-+..++.+..+.|+|++++..+.+++. .+ |..
T Consensus 108 ~~~~~~la~~~~~~g~~~~A~~~~~~~l~--~~-p~~ 141 (176)
T 2r5s_A 108 FELACELAVQYNQVGRDEEALELLWNILK--VN-LGA 141 (176)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHT--TC-TTT
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHH--hC-ccc
Confidence 34566788888888999999999888886 43 554
No 168
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=33.51 E-value=95 Score=26.47 Aligned_cols=46 Identities=11% Similarity=-0.003 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025828 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (247)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (247)
+.|..+|++|+++ .|.+| ....|.+..|+. +|+.++|+...++|+.
T Consensus 213 ~~A~~~~~~al~~-----~p~~~---~a~~~lg~~~~~-~g~~~~A~~~~~~al~ 258 (336)
T 1p5q_A 213 SAAIESCNKALEL-----DSNNE---KGLSRRGEAHLA-VNDFELARADFQKVLQ 258 (336)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCcH---HHHHHHHHHHHH-CCCHHHHHHHHHHHHH
Confidence 5677788888764 34443 333455555554 6888888877666654
No 169
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=32.66 E-value=1.1e+02 Score=20.52 Aligned_cols=58 Identities=14% Similarity=0.114 Sum_probs=40.0
Q ss_pred HhHHHHHHHHHHhcChHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHH
Q 025828 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIIS 69 (247)
Q Consensus 7 e~~~~~Aklaeq~ery~dm~~~mk~ii~~~~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~ 69 (247)
.-+..++.+..+.|+|++++.+++++++ .+ |... .=...+..+|.. .+..-.|...+.
T Consensus 8 ~~~~~lg~~~~~~g~~~~A~~~~~~al~--~~-p~~~-~a~~~lg~~~~~-~g~~~~A~~~~~ 65 (100)
T 3ma5_A 8 FTRYALAQEHLKHDNASRALALFEELVE--TD-PDYV-GTYYHLGKLYER-LDRTDDAIDTYA 65 (100)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH--HS-TTCT-HHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHH--hC-CCcH-HHHHHHHHHHHH-cCCHHHHHHHHH
Confidence 4567889999999999999999999998 43 5543 345566666643 344444444443
No 170
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=32.03 E-value=44 Score=29.54 Aligned_cols=48 Identities=8% Similarity=0.049 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcch-hhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025828 150 AENTMLSYKAAQDIALTDLAPTHPIR-LGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (247)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~p~r-LgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (247)
.++|.+.|++|+++. |-. +..-.-|+-|+..-.++++.|....++|+.
T Consensus 220 ~ekA~~~ferAL~Ln--------P~~~id~~v~YA~~l~~~~gd~~~a~~~L~kAL~ 268 (301)
T 3u64_A 220 MEKAHTAFEHLTRYC--------SAHDPDHHITYADALCIPLNNRAGFDEALDRALA 268 (301)
T ss_dssp HHHHHHHHHHHHHHC--------CTTCSHHHHHHHHHTTTTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhC--------CCCCchHHHHHHHHHHHhcCCHHHHHHHHHHHHc
Confidence 367999999999875 543 666777888888777999998887777765
No 171
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=31.78 E-value=85 Score=30.62 Aligned_cols=47 Identities=15% Similarity=0.210 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025828 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (247)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (247)
.+.|.++|++|+++ .|.+ .....|.+..|++ +|+.++|+...++|+.
T Consensus 93 ~~~A~~~~~kAl~l-----~P~~---~~a~~~Lg~~~~~-~g~~~eAi~~~~~Al~ 139 (723)
T 4gyw_A 93 VQGALQCYTRAIQI-----NPAF---ADAHSNLASIHKD-SGNIPEAIASYRTALK 139 (723)
T ss_dssp HHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----CCCC---HHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 35688899999865 3444 3445566666665 7999999888877765
No 172
>2g0u_A Type III secretion system needle protein; helix-turn-helix, unknown function; NMR {Burkholderia pseudomallei} SCOP: a.2.20.1
Probab=31.38 E-value=29 Score=25.40 Aligned_cols=59 Identities=12% Similarity=0.228 Sum_probs=37.2
Q ss_pred hhhHHhhhccccccchhhcccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCcchhh----HhhhHHHHHH
Q 025828 122 SKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLG----LALNFSVFYY 187 (247)
Q Consensus 122 skvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~p~rLg----L~LN~SVF~y 187 (247)
+.+|+ .|+..-||-.+...-+ .-+..+.+..+.|++-- +..|.||..|+ +.-+|++|+-
T Consensus 6 ~~~~~---~~~~~~~Ld~vs~~f~--~~a~~~~~~l~~Al~~L--~~~psNPa~LAe~Qa~lseynl~RN 68 (92)
T 2g0u_A 6 TPLLA---DYEWSGYLTGIGRAFD--DGVKDLNKQLQDAQANL--TKNPSDPTALANYQMIMSEYNLYRN 68 (92)
T ss_dssp CCCTT---SSSSTHHHHHHHGGGC--TTTHHHHHHHHHHHHHH--HHSTTCHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHh---cCcccchHHHHHHHHH--HHHHHHHHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 45566 4555556666554321 12455666777777544 36899999998 6667877753
No 173
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=31.23 E-value=2.3e+02 Score=23.61 Aligned_cols=28 Identities=14% Similarity=0.302 Sum_probs=18.6
Q ss_pred HhHHHHHHHHHHhcChHHHHHHHHHHhh
Q 025828 7 EQYVYLAKLAEQAERYEEMVKFMDSLVT 34 (247)
Q Consensus 7 e~~~~~Aklaeq~ery~dm~~~mk~ii~ 34 (247)
+-+..++.+..+.|+|++++..+++.+.
T Consensus 68 ~~~~~lg~~~~~~g~~~~A~~~~~~al~ 95 (388)
T 1w3b_A 68 EAYSNLGNVYKERGQLQEAIEHYRHALR 95 (388)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 3455666666677777777777777665
No 174
>3ub0_A Non-structural protein 6, NSP6,; feline coronavirus, primer-independen polymerase, replication; 2.60A {Feline infectious peritonitis virus}
Probab=31.03 E-value=33 Score=28.32 Aligned_cols=38 Identities=32% Similarity=0.518 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHHHH
Q 025828 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFEEA 207 (247)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd~a 207 (247)
-+.|.++|++|..- .-+ |. .++...+|+.|||.+||.=
T Consensus 19 YE~A~~~Ye~a~~n---g~~---pQ--------------~~Kql~KA~NIAKse~drd 56 (199)
T 3ub0_A 19 YEKARADLEEAKKN---DVS---PQ--------------LLKQLTKACNIAKSEFERE 56 (199)
T ss_dssp HHHHHHHHHHHHHT---TCC---HH--------------HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc---CCC---HH--------------HHHHHHHHHHHHHHHHhHH
Confidence 46788889888532 222 21 3577889999999999853
No 175
>2wb7_A PT26-6P; extra chromosomal elements, unknown function; 2.60A {Thermococcus SP}
Probab=28.70 E-value=1.9e+02 Score=27.49 Aligned_cols=52 Identities=19% Similarity=-0.012 Sum_probs=34.0
Q ss_pred hhcccchhHHHHHHHHHHHHHHHHHHHhhcCCCCC-cchhhHhhhHHHHHHHHhC
Q 025828 138 AEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTH-PIRLGLALNFSVFYYEILN 191 (247)
Q Consensus 138 aE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~-p~rLgL~LN~SVF~yei~~ 191 (247)
+|....+.-.+++++|.++|++|++..+. +..|+ |--.-..||- +-.||.-|
T Consensus 436 ~e~~~n~~a~~yA~kAi~~Y~~Ai~~L~k-~~~tdd~~~v~~~~~~-ak~yE~aG 488 (526)
T 2wb7_A 436 AKGMNNENAIEYAQGAIDEYKAAINDLQK-AAQQDDYQMFLNYLNA-AKKHEMAG 488 (526)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHHHHH-HTTCCSHHHHHHHHHH-HHHHHHHH
T ss_pred hhccCCHHHHHHHHHHHHHHHHHHHHHHh-hhccCCHHHHHHHHHH-hhhhhhcc
Confidence 55666677778999999999999999964 55444 4333333333 33466544
No 176
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=28.06 E-value=1.2e+02 Score=19.49 Aligned_cols=26 Identities=19% Similarity=0.365 Sum_probs=14.7
Q ss_pred HHHHHHHHHHhcChHHHHHHHHHHhh
Q 025828 9 YVYLAKLAEQAERYEEMVKFMDSLVT 34 (247)
Q Consensus 9 ~~~~Aklaeq~ery~dm~~~mk~ii~ 34 (247)
+..++.+..+.|+|++++.+++++++
T Consensus 9 ~~~~~~~~~~~~~~~~A~~~~~~a~~ 34 (112)
T 2kck_A 9 YYLEGVLQYDAGNYTESIDLFEKAIQ 34 (112)
T ss_dssp GGGHHHHHHSSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 34455555555666666666665554
No 177
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=27.20 E-value=63 Score=25.95 Aligned_cols=74 Identities=16% Similarity=0.093 Sum_probs=48.0
Q ss_pred CCCCchhhHHhhhccccccchhhcccchhHHHHHHHHHHHHHHHHHHHhhcCCCCC----cchhhHhhhHHHHHHHHhCC
Q 025828 117 ATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTH----PIRLGLALNFSVFYYEILNS 192 (247)
Q Consensus 117 ~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~----p~rLgL~LN~SVF~yei~~~ 192 (247)
+.++++-.-|.++--.. -.+..+ ...++-.+.|++|.. .+||+. .-+.-|=++|+.| .++ +|
T Consensus 10 p~~yd~W~~yl~llE~~------g~p~~d--~~l~rlrd~YerAia----~~Pp~k~~~wrrYI~LWIrYA~~-~ei-~D 75 (161)
T 4h7y_A 10 ANNPEDWLSLLLKLEKN------SVPLSD--ALLNKLIGRYSQAIE----ALPPDKYGQNESFARIQVRFAEL-KAI-QE 75 (161)
T ss_dssp CCSHHHHHHHHHHHHHH------TCSCCH--HHHHHHHHHHHHHHH----HSCGGGGTTCHHHHHHHHHHHHH-HHH-HC
T ss_pred CCCHHHHHHHHHHHHHc------CCCchh--hHHHHHHHHHHHHHH----cCCccccccHHHHHHHHHHHHHH-HHh-cC
Confidence 44567777777652211 001112 566778899998874 467653 3455688999999 455 99
Q ss_pred HHHHHHHHHHHH
Q 025828 193 SEKACTMAKQAF 204 (247)
Q Consensus 193 ~~~A~~iak~af 204 (247)
+++|.++=+.|.
T Consensus 76 ~d~aR~vy~~a~ 87 (161)
T 4h7y_A 76 PDDARDYFQMAR 87 (161)
T ss_dssp GGGCHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 998888777763
No 178
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=25.91 E-value=88 Score=26.74 Aligned_cols=49 Identities=16% Similarity=0.176 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCc--------------chhhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025828 151 ENTMLSYKAAQDIALTDLAPTHP--------------IRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (247)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p--------------~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (247)
+.|..+|++|+.+. |.++ ++..+.+|.+..|+. +|+.++|+...++|+.
T Consensus 196 ~~A~~~y~~Al~~~-----p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~-~g~~~~A~~~~~~al~ 258 (338)
T 2if4_A 196 EEAMQQYEMAIAYM-----GDDFMFQLYGKYQDMALAVKNPCHLNIAACLIK-LKRYDEAIGHCNIVLT 258 (338)
T ss_dssp HHHHHHHHHHHHHS-----CHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHT-TTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----ccchhhhhcccHHHHHHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 45778888888653 2332 122467788887765 7999999998888764
No 179
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=24.81 E-value=94 Score=25.61 Aligned_cols=28 Identities=11% Similarity=0.082 Sum_probs=20.5
Q ss_pred HhHHHHHHHHHHhcChHHHHHHHHHHhh
Q 025828 7 EQYVYLAKLAEQAERYEEMVKFMDSLVT 34 (247)
Q Consensus 7 e~~~~~Aklaeq~ery~dm~~~mk~ii~ 34 (247)
+.+..+|.+..+.|+|++++.++.+.+.
T Consensus 5 ~~~~~~g~~~~~~g~~~~A~~~~~~al~ 32 (281)
T 2c2l_A 5 QELKEQGNRLFVGRKYPEAAACYGRAIT 32 (281)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 4556677777777888888887777775
No 180
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=23.68 E-value=2.2e+02 Score=20.96 Aligned_cols=164 Identities=8% Similarity=-0.053 Sum_probs=84.8
Q ss_pred HhHHHHHHHHHHhcChHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHHHhhhhhhcchh-hhhH
Q 025828 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNE-EHVS 85 (247)
Q Consensus 7 e~~~~~Aklaeq~ery~dm~~~mk~ii~~~~~~~~L~~eERnLls~ayKn~i~~~R~s~R~l~~ieqk~~~~~~~-~~~~ 85 (247)
.-+..++.+..+.|+|++++.++.+.++ .. +. +..-...+..+|-...+....+...+....+........ ....
T Consensus 43 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~--~~-~~-~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~ 118 (225)
T 2vq2_A 43 LAWLVRAEIYQYLKVNDKAQESFRQALS--IK-PD-SAEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPTPYIANLN 118 (225)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH--HC-TT-CHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTCSCHHHHHHH
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHH--hC-CC-ChHHHHHHHHHHHHhcCcHHHHHHHHHHHHcCcCCcchHHHHHH
Confidence 4556788899999999999999999987 32 33 455555666666544255666666665544311111110 1111
Q ss_pred HHHHHHH-HHHHHHHHHHHHHHHHhhhccCCCCCCCchhhHHhhhccccccchhhcccchhHHHHHHHHHHHHHHHHHHH
Q 025828 86 LVKDYRS-KVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIA 164 (247)
Q Consensus 86 ~i~~yk~-ki~~EL~~~C~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a 164 (247)
...-|.. .=-++-...+..++.+ -|.. ..+ +...|..|.- .+ -.+.|...|++++...
T Consensus 119 l~~~~~~~~~~~~A~~~~~~~~~~-----~~~~----~~~--~~~la~~~~~-----~~-----~~~~A~~~~~~~~~~~ 177 (225)
T 2vq2_A 119 KGICSAKQGQFGLAEAYLKRSLAA-----QPQF----PPA--FKELARTKML-----AG-----QLGDADYYFKKYQSRV 177 (225)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHH-----STTC----HHH--HHHHHHHHHH-----HT-----CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHh-----CCCC----chH--HHHHHHHHHH-----cC-----CHHHHHHHHHHHHHhC
Confidence 1111111 0012223333333332 1221 111 1222333211 11 1456788888887653
Q ss_pred hhcCCC-CCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHH
Q 025828 165 LTDLAP-THPIRLGLALNFSVFYYEILNSSEKACTMAKQAF 204 (247)
Q Consensus 165 ~~~L~p-t~p~rLgL~LN~SVF~yei~~~~~~A~~iak~af 204 (247)
| .+|.. ++....+|...|+.+.|....+.+.
T Consensus 178 -----~~~~~~~----~~~~~~~~~~~~~~~~a~~~~~~~~ 209 (225)
T 2vq2_A 178 -----EVLQADD----LLLGWKIAKALGNAQAAYEYEAQLQ 209 (225)
T ss_dssp -----CSCCHHH----HHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred -----CCCCHHH----HHHHHHHHHhcCcHHHHHHHHHHHH
Confidence 3 44443 3344556667899999887766654
No 181
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=23.49 E-value=1.6e+02 Score=19.19 Aligned_cols=29 Identities=24% Similarity=0.177 Sum_probs=25.4
Q ss_pred HHhHHHHHHHHHHhcChHHHHHHHHHHhh
Q 025828 6 REQYVYLAKLAEQAERYEEMVKFMDSLVT 34 (247)
Q Consensus 6 re~~~~~Aklaeq~ery~dm~~~mk~ii~ 34 (247)
-+.+..++.+....|+|++++....+.+.
T Consensus 4 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~ 32 (111)
T 2l6j_A 4 FEKQKEQGNSLFKQGLYREAVHCYDQLIT 32 (111)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 35667888889899999999999999997
No 182
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=23.20 E-value=1.3e+02 Score=30.79 Aligned_cols=60 Identities=15% Similarity=0.076 Sum_probs=42.6
Q ss_pred HHHHHHHHHhcChHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHhhhhhh--hhhHHHHHHHH
Q 025828 10 VYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGS--LRAAWRIISSI 71 (247)
Q Consensus 10 ~~~Aklaeq~ery~dm~~~mk~ii~~~~~~~~L~~eERnLls~ayKn~i~~--~R~s~R~l~~i 71 (247)
...++|.++.+.|+-++++-+..++. .+ ++-..-...|.+.-||..+.- .-.|+-.|.+.
T Consensus 903 ~hv~~LFe~~~~~~~vi~fa~lAi~~-~~-~~~~~~~~~l~~~iFk~~L~l~~ye~Ay~aL~~~ 964 (1139)
T 4fhn_B 903 LHLSKKLFEESAYIDALEFSLLADAS-KE-TDDEDLSIAITHETLKTACAAGKFDAAHVALMVL 964 (1139)
T ss_dssp HHHHHHHHHTSCCHHHHHHHHHHHHH-CC-SCCHHHHHHHHHHHHHHHHHHCCSGGGGHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHh-cc-CCChhhHHHHHHHHHHHHHhhCCHHHHHHHHHhC
Confidence 45678999999999999999988873 22 332233455788888887744 44777777655
No 183
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=23.03 E-value=2e+02 Score=20.30 Aligned_cols=26 Identities=19% Similarity=0.226 Sum_probs=14.9
Q ss_pred HHHHHHHHHHhcChHHHHHHHHHHhh
Q 025828 9 YVYLAKLAEQAERYEEMVKFMDSLVT 34 (247)
Q Consensus 9 ~~~~Aklaeq~ery~dm~~~mk~ii~ 34 (247)
+..+|....+.|+|++++.++++++.
T Consensus 21 ~~~~a~~~~~~g~~~~A~~~~~~al~ 46 (142)
T 2xcb_A 21 LYALGFNQYQAGKWDDAQKIFQALCM 46 (142)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccHHHHHHHHHHHHH
Confidence 34455555555666666666666554
No 184
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=22.91 E-value=2e+02 Score=23.77 Aligned_cols=46 Identities=11% Similarity=0.054 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025828 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (247)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (247)
+.|...|+++++. .|.+| .+..|.++.+. -+|+.++|...-++|+.
T Consensus 183 ~eA~~~~~~~l~~-----~p~~~---~~~~~la~~~~-~~g~~~eA~~~l~~al~ 228 (291)
T 3mkr_A 183 QDAYYIFQEMADK-----CSPTL---LLLNGQAACHM-AQGRWEAAEGVLQEALD 228 (291)
T ss_dssp HHHHHHHHHHHHH-----SCCCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCcH---HHHHHHHHHHH-HcCCHHHHHHHHHHHHH
Confidence 4455666665542 33333 34444555544 47999999887777665
No 185
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=22.40 E-value=3.3e+02 Score=22.54 Aligned_cols=25 Identities=16% Similarity=0.286 Sum_probs=12.0
Q ss_pred HHHHHHHHHhcChHHHHHHHHHHhh
Q 025828 10 VYLAKLAEQAERYEEMVKFMDSLVT 34 (247)
Q Consensus 10 ~~~Aklaeq~ery~dm~~~mk~ii~ 34 (247)
..++.+.-+.++++++..+.+..+.
T Consensus 37 ~~l~~~~~~~~~~~~a~~~~~~a~~ 61 (388)
T 1w3b_A 37 LLLSSIHFQCRRLDRSAHFSTLAIK 61 (388)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 3444444444555555555544443
No 186
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=21.92 E-value=1.8e+02 Score=26.35 Aligned_cols=46 Identities=26% Similarity=0.378 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025828 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (247)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (247)
+.|.+.|++|+++ .|.+| ....|.+..|+. +|+.++|+...++|+.
T Consensus 74 ~~A~~~~~~al~~-----~p~~~---~~~~~la~~~~~-~g~~~~A~~~~~~al~ 119 (568)
T 2vsy_A 74 AEAAVLLQQASDA-----APEHP---GIALWLGHALED-AGQAEAAAAAYTRAHQ 119 (568)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCCCH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 5567777777654 23332 333444544443 6777777776666554
No 187
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=21.91 E-value=7.9e+02 Score=26.71 Aligned_cols=24 Identities=25% Similarity=0.216 Sum_probs=20.4
Q ss_pred hHHHHHHHHhCCHHHHHHHHHHHH
Q 025828 181 NFSVFYYEILNSSEKACTMAKQAF 204 (247)
Q Consensus 181 N~SVF~yei~~~~~~A~~iak~af 204 (247)
.-.|-+|+-.|..++||.+..+|+
T Consensus 1284 eeli~yYe~~G~feEAI~LlE~aL 1307 (1630)
T 1xi4_A 1284 EELINYYQDRGYFEELITMLEAAL 1307 (1630)
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHh
Confidence 355778899999999999999983
No 188
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=21.37 E-value=4.5e+02 Score=23.61 Aligned_cols=28 Identities=7% Similarity=-0.082 Sum_probs=23.9
Q ss_pred HhHHHHHHHHHHhcChHHHHHHHHHHhh
Q 025828 7 EQYVYLAKLAEQAERYEEMVKFMDSLVT 34 (247)
Q Consensus 7 e~~~~~Aklaeq~ery~dm~~~mk~ii~ 34 (247)
+-+..+|.+..+.|+|++++.++++.++
T Consensus 24 ~~~~~lg~~~~~~g~~~~A~~~~~~al~ 51 (568)
T 2vsy_A 24 VAWLMLADAELGMGDTTAGEMAVQRGLA 51 (568)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 4566788888889999999999999987
No 189
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=21.25 E-value=2.7e+02 Score=22.66 Aligned_cols=29 Identities=21% Similarity=0.129 Sum_probs=23.5
Q ss_pred HHhHHHHHHHHHHhcChHHHHHHHHHHhh
Q 025828 6 REQYVYLAKLAEQAERYEEMVKFMDSLVT 34 (247)
Q Consensus 6 re~~~~~Aklaeq~ery~dm~~~mk~ii~ 34 (247)
-+-...+|.+..+.|||++++..+.+++.
T Consensus 219 ~~~~~~la~~l~~~g~~~~A~~~l~~~l~ 247 (287)
T 3qou_A 219 AALATQLALQLHQVGRNEEALELLFGHLR 247 (287)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHh
Confidence 34566788888888999999988888886
No 190
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=20.76 E-value=1.5e+02 Score=25.83 Aligned_cols=46 Identities=17% Similarity=0.110 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHHH
Q 025828 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAFE 205 (247)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~afd 205 (247)
+.|...|++|++ +.|.+| ....+.+..|+ .+|+.++|+...++|+.
T Consensus 290 ~~A~~~~~~al~-----~~p~~~---~a~~~lg~~~~-~~g~~~eA~~~l~~Al~ 335 (370)
T 1ihg_A 290 QGAVDSCLEALE-----IDPSNT---KALYRRAQGWQ-GLKEYDQALADLKKAQE 335 (370)
T ss_dssp HHHHHHHHHHHT-----TCTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----hCchhH---HHHHHHHHHHH-HccCHHHHHHHHHHHHH
Confidence 567788888875 445544 33445555555 47999999887666654
No 191
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=20.74 E-value=3.4e+02 Score=24.05 Aligned_cols=45 Identities=9% Similarity=-0.051 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchhhHhhhHHHHHHHHhCCHHHHHHHHHHHH
Q 025828 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQAF 204 (247)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p~rLgL~LN~SVF~yei~~~~~~A~~iak~af 204 (247)
+.|..+|++|+++ .|.++ ...+|.+.-|+. +|+.++|+...++|+
T Consensus 334 ~~A~~~~~~al~~-----~p~~~---~a~~~~g~a~~~-~g~~~~A~~~~~~al 378 (457)
T 1kt0_A 334 TKAVECCDKALGL-----DSANE---KGLYRRGEAQLL-MNEFESAKGDFEKVL 378 (457)
T ss_dssp HHHHHHHHHHHHH-----STTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCccH---HHHHHHHHHHHH-ccCHHHHHHHHHHHH
Confidence 5678888888864 33443 334555555554 799998877666654
Done!