BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025832
(247 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q93VG8|PPDEX_ARATH DeSI-like protein At4g17486 OS=Arabidopsis thaliana GN=At4g17486
PE=2 SV=1
Length = 224
Score = 213 bits (541), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 88/147 (59%), Positives = 117/147 (79%)
Query: 41 APVYLNVYDLTPANGYVYWAGLGIFHTGVEVYGIEYAFGAHDFASSGVFEVEPRQCPGFR 100
PVYLNVYDLTP N Y+YW G+GIFH+G+E + +EY +GAH++ +SGV+EVEPR CPGF
Sbjct: 26 TPVYLNVYDLTPVNNYLYWFGIGIFHSGIEAHNLEYCYGAHEYPTSGVYEVEPRNCPGFI 85
Query: 101 FRKSILMGTTCLDPIEVREFMERQSANYNGDTYHLIVKNCNHFCEDICYKLTGKPIPKWV 160
FR+S+L+GTT + + R +ME+ S Y+GDTYHLI KNCNHF E++C +LTGKPIP W+
Sbjct: 86 FRRSVLLGTTSMSRSDFRSYMEKLSRKYHGDTYHLIAKNCNHFTEEVCLQLTGKPIPGWI 145
Query: 161 NRLARIGLLCNCILPETLKTSTVPHDP 187
NRLAR+G CNC+LPE+++ + V P
Sbjct: 146 NRLARVGSFCNCLLPESIQLTAVSALP 172
>sp|Q5PQ09|DESI2_XENLA Desumoylating isopeptidase 2 OS=Xenopus laevis GN=desi2 PE=2 SV=1
Length = 192
Score = 119 bits (299), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 55/130 (42%), Positives = 80/130 (61%), Gaps = 4/130 (3%)
Query: 39 GNAPVYLNVYDLTPANGYVYWAGLGIFHTGVEVYGIEYAFGAHDFASSGVFEVEPRQC-- 96
N P+ LNVYD+ N Y G+G+FH+G++VYG E+A+G H + SGVFE+ P
Sbjct: 2 ANQPIILNVYDMYWINEYTSSLGIGVFHSGIQVYGREFAYGGHPYPFSGVFEISPGDSTE 61
Query: 97 --PGFRFRKSILMGTTCLDPIEVREFMERQSANYNGDTYHLIVKNCNHFCEDICYKLTGK 154
F+F+++I +G+T ++ + +E Y G+ YHL+ KNCNHF + L GK
Sbjct: 62 LGDTFKFKEAIALGSTDFTENDIEKIIEELGKEYKGNAYHLMHKNCNHFSSALSEILCGK 121
Query: 155 PIPKWVNRLA 164
IP+WVNRLA
Sbjct: 122 EIPRWVNRLA 131
>sp|Q6DC39|DESI2_DANRE Desumoylating isopeptidase 2 OS=Danio rerio GN=desi2 PE=2 SV=1
Length = 196
Score = 119 bits (298), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 89/153 (58%), Gaps = 8/153 (5%)
Query: 39 GNAPVYLNVYDLTPANGYVYWAGLGIFHTGVEVYGIEYAFGAHDFASSGVFEVEPRQC-- 96
N PV LNVYD+ N + G+G+FH+G+E+YG E+A+G H + SG+FE+ P
Sbjct: 2 ANEPVILNVYDMYWINEFTSSLGIGVFHSGIEIYGREFAYGGHPYPFSGIFEITPGDATE 61
Query: 97 --PGFRFRKSILMGTTCLDPIEVREFMERQSANYNGDTYHLIVKNCNHFCEDICYKLTGK 154
F+F+++I++G+T +V +E Y G+ YHL+ KNCNHF + L G+
Sbjct: 62 LGETFKFKEAIVLGSTDFTEEDVERIVEEMGKEYKGNAYHLMHKNCNHFSSALSEILCGR 121
Query: 155 PIPKWVNRLAR----IGLLCNCILPETLKTSTV 183
IP+WVNRLA + L +C+ E L + +
Sbjct: 122 EIPRWVNRLAYFSSCVPFLQSCLPKEWLTPAAL 154
>sp|A3QRX8|DESI2_PIG Desumoylating isopeptidase 2 OS=Sus scrofa GN=DESI2 PE=2 SV=1
Length = 194
Score = 117 bits (292), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 89/153 (58%), Gaps = 8/153 (5%)
Query: 39 GNAPVYLNVYDLTPANGYVYWAGLGIFHTGVEVYGIEYAFGAHDFASSGVFEVEPRQCP- 97
N V LNVYD+ N Y G+G+FH+G+EVYG E+A+G H + SG+FE+ P
Sbjct: 3 ANQLVVLNVYDMYWMNEYTSSIGIGVFHSGIEVYGREFAYGGHPYPFSGIFEISPGNASE 62
Query: 98 ---GFRFRKSILMGTTCLDPIEVREFMERQSANYNGDTYHLIVKNCNHFCEDICYKLTGK 154
F+F++++++G+T ++ + +E Y G+ YHL+ KNCNHF + L GK
Sbjct: 63 LGETFKFKEAVVLGSTDFLEDDIEKIVEELGKEYKGNAYHLMHKNCNHFSSALSEILCGK 122
Query: 155 PIPKWVNRLAR----IGLLCNCILPETLKTSTV 183
IP+W+NRLA I L +C+ E L + +
Sbjct: 123 EIPRWINRLAYFSSCIPFLQSCLPKEWLTPAAL 155
>sp|Q5R456|DESI2_PONAB Desumoylating isopeptidase 2 OS=Pongo abelii GN=DESI2 PE=2 SV=1
Length = 194
Score = 117 bits (292), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 89/153 (58%), Gaps = 8/153 (5%)
Query: 39 GNAPVYLNVYDLTPANGYVYWAGLGIFHTGVEVYGIEYAFGAHDFASSGVFEVEPRQCP- 97
N V LNVYD+ N Y G+G+FH+G+EVYG E+A+G H + SG+FE+ P
Sbjct: 3 ANQLVVLNVYDMYWMNEYTSSIGIGVFHSGIEVYGREFAYGGHPYPFSGIFEISPGNASE 62
Query: 98 ---GFRFRKSILMGTTCLDPIEVREFMERQSANYNGDTYHLIVKNCNHFCEDICYKLTGK 154
F+F++++++G+T ++ + +E Y G+ YHL+ KNCNHF + L GK
Sbjct: 63 LGETFKFKEAVVLGSTDFLEDDIEKIVEELGKEYKGNAYHLMHKNCNHFSSALSEILCGK 122
Query: 155 PIPKWVNRLAR----IGLLCNCILPETLKTSTV 183
IP+W+NRLA I L +C+ E L + +
Sbjct: 123 EIPRWINRLAYFSSCIPFLQSCLPKEWLTPAAL 155
>sp|Q9BSY9|DESI2_HUMAN Desumoylating isopeptidase 2 OS=Homo sapiens GN=DESI2 PE=1 SV=1
Length = 194
Score = 117 bits (292), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 89/153 (58%), Gaps = 8/153 (5%)
Query: 39 GNAPVYLNVYDLTPANGYVYWAGLGIFHTGVEVYGIEYAFGAHDFASSGVFEVEPRQCP- 97
N V LNVYD+ N Y G+G+FH+G+EVYG E+A+G H + SG+FE+ P
Sbjct: 3 ANQLVVLNVYDMYWMNEYTSSIGIGVFHSGIEVYGREFAYGGHPYPFSGIFEISPGNASE 62
Query: 98 ---GFRFRKSILMGTTCLDPIEVREFMERQSANYNGDTYHLIVKNCNHFCEDICYKLTGK 154
F+F++++++G+T ++ + +E Y G+ YHL+ KNCNHF + L GK
Sbjct: 63 LGETFKFKEAVVLGSTDFLEDDIEKIVEELGKEYKGNAYHLMHKNCNHFSSALSEILCGK 122
Query: 155 PIPKWVNRLAR----IGLLCNCILPETLKTSTV 183
IP+W+NRLA I L +C+ E L + +
Sbjct: 123 EIPRWINRLAYFSSCIPFLQSCLPKEWLTPAAL 155
>sp|Q9D291|DESI2_MOUSE Desumoylating isopeptidase 2 OS=Mus musculus GN=Desi2 PE=2 SV=1
Length = 194
Score = 117 bits (292), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 89/153 (58%), Gaps = 8/153 (5%)
Query: 39 GNAPVYLNVYDLTPANGYVYWAGLGIFHTGVEVYGIEYAFGAHDFASSGVFEVEPRQCP- 97
N V LNVYD+ N Y G+G+FH+G+EVYG E+A+G H + SG+FE+ P
Sbjct: 3 ANQLVVLNVYDMYWMNEYTSSIGIGVFHSGIEVYGREFAYGGHPYPFSGIFEISPGNASE 62
Query: 98 ---GFRFRKSILMGTTCLDPIEVREFMERQSANYNGDTYHLIVKNCNHFCEDICYKLTGK 154
F+F++++++G+T ++ + +E Y G+ YHL+ KNCNHF + L GK
Sbjct: 63 LGETFKFKEAVVLGSTDFLEDDIEKIVEELGKEYKGNAYHLMHKNCNHFSSALSEILCGK 122
Query: 155 PIPKWVNRLAR----IGLLCNCILPETLKTSTV 183
IP+W+NRLA I L +C+ E L + +
Sbjct: 123 EIPRWINRLAYFSSCIPFLQSCLPKEWLTPAAL 155
>sp|Q5XIT6|DESI2_RAT Desumoylating isopeptidase 2 OS=Rattus norvegicus GN=Desi2 PE=2
SV=1
Length = 194
Score = 117 bits (292), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/152 (38%), Positives = 89/152 (58%), Gaps = 8/152 (5%)
Query: 40 NAPVYLNVYDLTPANGYVYWAGLGIFHTGVEVYGIEYAFGAHDFASSGVFEVEPRQCP-- 97
N V LNVYD+ N Y G+G+FH+G+EVYG E+A+G H + SG+FE+ P
Sbjct: 4 NQLVVLNVYDMYWMNEYTSSIGIGVFHSGIEVYGREFAYGGHPYPFSGIFEISPGNAAEL 63
Query: 98 --GFRFRKSILMGTTCLDPIEVREFMERQSANYNGDTYHLIVKNCNHFCEDICYKLTGKP 155
F+F++++++G+T ++ + +E Y G+ YHL+ KNCNHF + L GK
Sbjct: 64 GETFKFKEAVVLGSTDFLEDDIEKIVEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKE 123
Query: 156 IPKWVNRLAR----IGLLCNCILPETLKTSTV 183
IP+W+NRLA I L +C+ E L + +
Sbjct: 124 IPRWINRLAYFSSCIPFLQSCLPKEWLTPAAL 155
>sp|Q5ZIV7|DESI2_CHICK Desumoylating isopeptidase 2 OS=Gallus gallus GN=DESI2 PE=2 SV=1
Length = 193
Score = 116 bits (291), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 89/153 (58%), Gaps = 8/153 (5%)
Query: 39 GNAPVYLNVYDLTPANGYVYWAGLGIFHTGVEVYGIEYAFGAHDFASSGVFEVEPRQCP- 97
N V LNVYD+ N Y G+G+FH+G+EVYG E+A+G H + SG+FE+ P
Sbjct: 2 ANQLVILNVYDMYWMNEYTSSLGIGVFHSGIEVYGREFAYGGHPYPFSGIFEISPGNASE 61
Query: 98 ---GFRFRKSILMGTTCLDPIEVREFMERQSANYNGDTYHLIVKNCNHFCEDICYKLTGK 154
F+F++++++G+T ++ + +E + G+ YHL+ KNCNHF + L GK
Sbjct: 62 LGETFKFKEAVVLGSTDFMEDDIEKIVEELGKEFKGNAYHLMHKNCNHFSSALSEILCGK 121
Query: 155 PIPKWVNRLAR----IGLLCNCILPETLKTSTV 183
IP+WVNRLA I L +C+ E L + +
Sbjct: 122 EIPRWVNRLAYFSSCIPFLQSCLPKEWLTPAAL 154
>sp|Q8X1T0|HAG1_SCHPO DeSI-like protein hag1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=hag1 PE=1 SV=1
Length = 201
Score = 109 bits (272), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/131 (45%), Positives = 80/131 (61%), Gaps = 5/131 (3%)
Query: 43 VYLNVYDL---TPANGYVYWAGLGIFHTGVEVYGIEYAFGAHDF-ASSGVFEVEPRQ-CP 97
VY+NVYDL +P N + GLGI+HTG+ + G EYAFGAH+ S+GVF PR
Sbjct: 3 VYINVYDLMPDSPVNKLAWTLGLGIYHTGLVLEGKEYAFGAHEIPGSTGVFATMPRPPLE 62
Query: 98 GFRFRKSILMGTTCLDPIEVREFMERQSANYNGDTYHLIVKNCNHFCEDICYKLTGKPIP 157
G R+R SI + L +V + R S + G +Y L+ +NCNHF +LTG PIP
Sbjct: 63 GCRWRCSIALPNCTLPKPDVDRILIRLSQEFTGLSYSLLERNCNHFTNAAAIELTGSPIP 122
Query: 158 KWVNRLARIGL 168
++NR++RIGL
Sbjct: 123 SFLNRISRIGL 133
>sp|Q6GLM5|DESI1_XENLA Desumoylating isopeptidase 1 OS=Xenopus laevis GN=desi1 PE=2 SV=1
Length = 169
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 45/101 (44%), Gaps = 4/101 (3%)
Query: 63 GIFHTGVEVYGIEYAFGAHDFASSGVFEVEPRQCPGFRFRKSILMGTTCLDPIEVREFME 122
GI+HT + V+ E+ +G S + R G L T + I +
Sbjct: 36 GIWHTSIIVFDEEFFYGREGITSC----LPGRTMLGEPDSVMELGITEVTEEIFLEYLSS 91
Query: 123 RQSANYNGDTYHLIVKNCNHFCEDICYKLTGKPIPKWVNRL 163
+ ++G++YHL NCN F ++ LTGK IP ++ L
Sbjct: 92 LGESGFSGESYHLFDHNCNTFSNEVAQFLTGKKIPSYITEL 132
>sp|Q6ICB0|DESI1_HUMAN Desumoylating isopeptidase 1 OS=Homo sapiens GN=DESI1 PE=1 SV=1
Length = 168
Score = 40.8 bits (94), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 59/143 (41%), Gaps = 40/143 (27%)
Query: 42 PVYLNVYDLTPANGYVYWAGL------GIFHTGVEVYGIEYAFGAHDFASSGVFEVEPRQ 95
PV L VYDL+ + GI+HT + V+ E+ FG+ +S
Sbjct: 8 PVKLYVYDLSKGLARRLSPIMLGKQLEGIWHTSIVVHKDEFFFGSGGISS---------- 57
Query: 96 CPGFRFRKSILMGTTCLDP---------IEVRE--FMERQSAN----YNGDTYHLIVKNC 140
CP G T L P EV E F+E S+ + G+ Y+L NC
Sbjct: 58 CP---------PGGTLLGPPDSVVDVGSTEVTEEIFLEYLSSLGESLFRGEAYNLFEHNC 108
Query: 141 NHFCEDICYKLTGKPIPKWVNRL 163
N F ++ LTG+ IP ++ L
Sbjct: 109 NTFSNEVAQFLTGRKIPSYITDL 131
>sp|Q4KM30|DESI1_RAT Desumoylating isopeptidase 1 OS=Rattus norvegicus GN=Desi1 PE=2
SV=1
Length = 168
Score = 40.8 bits (94), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 56/129 (43%), Gaps = 12/129 (9%)
Query: 42 PVYLNVYDLTPANGYVYWAGL------GIFHTGVEVYGIEYAFGAHDFASSGVFEVEPRQ 95
PV L VYDL+ + GI+HT + V+ E+ FG SSG+ P
Sbjct: 8 PVKLYVYDLSKGLARRLSPIMLGKQLEGIWHTSIVVHKDEFFFG-----SSGISSCTPGG 62
Query: 96 CPGFRFRKSILMGTTCLDPIEVREFMERQSAN-YNGDTYHLIVKNCNHFCEDICYKLTGK 154
+ +G T + E++ + + G+ Y+L NCN F ++ LTG+
Sbjct: 63 TLLGPPDSVVDVGNTEVTEEIFLEYLSSLGESLFRGEAYNLFEHNCNTFSNEVAQFLTGR 122
Query: 155 PIPKWVNRL 163
IP ++ L
Sbjct: 123 KIPSYITDL 131
>sp|Q9CQT7|DESI1_MOUSE Desumoylating isopeptidase 1 OS=Mus musculus GN=Desi1 PE=1 SV=1
Length = 168
Score = 40.8 bits (94), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 56/129 (43%), Gaps = 12/129 (9%)
Query: 42 PVYLNVYDLTPANGYVYWAGL------GIFHTGVEVYGIEYAFGAHDFASSGVFEVEPRQ 95
PV L VYDL+ + GI+HT + V+ E+ FG SSG+ P
Sbjct: 8 PVKLYVYDLSKGLARRLSPIMLGKQLEGIWHTSIVVHKDEFFFG-----SSGISSCTPGG 62
Query: 96 CPGFRFRKSILMGTTCLDPIEVREFMERQSAN-YNGDTYHLIVKNCNHFCEDICYKLTGK 154
+ +G T + E++ + + G+ Y+L NCN F ++ LTG+
Sbjct: 63 TLLGPPDSVVDVGNTEVTEEIFLEYLSSLGESLFRGEAYNLFEHNCNTFSNEVAQFLTGR 122
Query: 155 PIPKWVNRL 163
IP ++ L
Sbjct: 123 KIPSYITDL 131
>sp|P76065|YDAU_ECOLI Uncharacterized protein YdaU OS=Escherichia coli (strain K12)
GN=ydaU PE=4 SV=1
Length = 285
Score = 35.0 bits (79), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 120 FMERQSANYNGDTYHLIVKNCNHFCEDI-CYKLTGKPIPKWVNRLARIGLLCN 171
+M+ A+Y DT HL + + + Y TGKPIPK NRLA+I L N
Sbjct: 23 YMQLYIADYLADTMHLSAEEHGAYLLLMFNYWQTGKPIPK--NRLAKIARLTN 73
>sp|E1B7X9|SMRCD_BOVIN SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A containing DEAD/H box 1 OS=Bos
taurus GN=SMARCAD1 PE=3 SV=2
Length = 1028
Score = 32.3 bits (72), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 48/113 (42%), Gaps = 25/113 (22%)
Query: 134 HLIVKNCNHFCEDICYKLTGKPIPKWVNRLARIGLLCNCILPETLKTSTVPHDPNFQGCD 193
HL+ N N+ LTG P+ N L + L N ++P +ST
Sbjct: 645 HLMTINANNRL-----LLTGTPVQ---NNLLELMSLLNFVMPHMFSSST----------- 685
Query: 194 SEKKRLRTAFSCWSSISMPQKEVSISSLFLHSHYKGCLPPWELKRSKSRSLKE 246
SE +R+ +SS + P E SI +H K + P+ L+R K LK+
Sbjct: 686 SEIRRM------FSSKTKPADEQSIYEKERIAHAKQIIKPFILRRVKEEVLKQ 732
>sp|Q29EQ3|RNO_DROPS PHD finger protein rhinoceros OS=Drosophila pseudoobscura
pseudoobscura GN=rno PE=3 SV=2
Length = 3313
Score = 31.2 bits (69), Expect = 7.0, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 139 NCNHFCEDICYKLTGKPIPKWVNRLARIGLLCNCIL 174
NCN CY +T P +W+ R +G+ +C+L
Sbjct: 345 NCNICVHQACYGITAIPSGQWLCRTCSMGITPDCVL 380
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.138 0.452
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 95,803,352
Number of Sequences: 539616
Number of extensions: 4033079
Number of successful extensions: 6298
Number of sequences better than 100.0: 18
Number of HSP's better than 100.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 6268
Number of HSP's gapped (non-prelim): 18
length of query: 247
length of database: 191,569,459
effective HSP length: 114
effective length of query: 133
effective length of database: 130,053,235
effective search space: 17297080255
effective search space used: 17297080255
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)