Query 025834
Match_columns 247
No_of_seqs 271 out of 2142
Neff 7.1
Searched_HMMs 29240
Date Mon Mar 25 18:37:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025834.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025834hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4f67_A UPF0176 protein LPG2838 100.0 2.2E-29 7.6E-34 222.2 7.1 125 3-149 121-247 (265)
2 3iwh_A Rhodanese-like domain p 99.9 1.2E-23 4E-28 160.5 8.7 99 5-131 3-101 (103)
3 3foj_A Uncharacterized protein 99.9 2.5E-23 8.6E-28 156.8 8.8 99 4-130 2-100 (100)
4 3eme_A Rhodanese-like domain p 99.9 5.2E-23 1.8E-27 155.8 8.7 100 4-131 2-101 (103)
5 1gmx_A GLPE protein; transfera 99.9 1.5E-22 5.2E-27 154.4 6.2 101 3-132 4-104 (108)
6 3gk5_A Uncharacterized rhodane 99.9 3.7E-22 1.3E-26 152.8 6.9 97 4-131 4-100 (108)
7 3d1p_A Putative thiosulfate su 99.9 1.4E-21 4.8E-26 155.3 10.3 114 4-130 23-136 (139)
8 2hhg_A Hypothetical protein RP 99.9 9E-22 3.1E-26 156.2 9.0 94 31-131 38-132 (139)
9 3ilm_A ALR3790 protein; rhodan 99.9 1.7E-21 5.7E-26 156.3 9.4 102 6-132 2-103 (141)
10 3hix_A ALR3790 protein; rhodan 99.8 6.8E-22 2.3E-26 150.7 6.2 87 31-131 12-98 (106)
11 1qxn_A SUD, sulfide dehydrogen 99.8 1.5E-21 5.1E-26 155.7 7.9 103 4-131 23-128 (137)
12 1wv9_A Rhodanese homolog TT165 99.8 1.2E-21 4.2E-26 145.9 5.6 92 5-127 3-94 (94)
13 1tq1_A AT5G66040, senescence-a 99.8 2.1E-21 7.1E-26 153.0 7.2 110 4-130 18-127 (129)
14 3nhv_A BH2092 protein; alpha-b 99.8 1E-20 3.5E-25 152.1 10.4 86 31-131 32-119 (144)
15 3flh_A Uncharacterized protein 99.8 6.9E-21 2.4E-25 149.0 7.6 100 5-131 16-118 (124)
16 3i2v_A Adenylyltransferase and 99.8 2E-20 6.7E-25 145.6 6.0 111 5-129 2-122 (127)
17 2fsx_A RV0390, COG0607: rhodan 99.8 9.2E-20 3.2E-24 146.6 7.1 112 4-128 5-123 (148)
18 2k0z_A Uncharacterized protein 99.8 7.5E-21 2.5E-25 145.8 0.5 87 31-131 15-101 (110)
19 1t3k_A Arath CDC25, dual-speci 99.8 6.7E-20 2.3E-24 148.6 2.7 101 19-131 31-140 (152)
20 3g5j_A Putative ATP/GTP bindin 99.8 1.3E-19 4.4E-24 141.9 4.0 94 31-127 16-131 (134)
21 1c25_A CDC25A; hydrolase, cell 99.8 1.1E-18 3.8E-23 141.8 8.4 109 4-130 23-145 (161)
22 1e0c_A Rhodanese, sulfurtransf 99.8 1.7E-18 6E-23 151.5 9.1 111 4-130 9-127 (271)
23 3op3_A M-phase inducer phospha 99.8 1.4E-18 4.7E-23 149.0 8.2 116 4-136 57-185 (216)
24 2vsw_A Dual specificity protei 99.8 1.1E-18 3.8E-23 140.6 7.1 118 1-130 1-131 (153)
25 2a2k_A M-phase inducer phospha 99.8 1.8E-18 6E-23 142.6 8.4 118 4-138 24-154 (175)
26 2jtq_A Phage shock protein E; 99.8 2.1E-19 7.3E-24 131.2 2.5 80 32-125 1-80 (85)
27 1e0c_A Rhodanese, sulfurtransf 99.7 2.3E-18 7.9E-23 150.7 9.3 112 6-131 149-270 (271)
28 1vee_A Proline-rich protein fa 99.7 1E-18 3.5E-23 138.4 6.3 114 3-135 4-127 (134)
29 2j6p_A SB(V)-AS(V) reductase; 99.7 1.8E-18 6E-23 140.0 7.0 110 3-130 4-120 (152)
30 1urh_A 3-mercaptopyruvate sulf 99.7 3E-18 1E-22 150.7 8.5 114 4-131 4-133 (280)
31 3hzu_A Thiosulfate sulfurtrans 99.7 3.2E-18 1.1E-22 154.1 8.0 112 6-131 42-158 (318)
32 1urh_A 3-mercaptopyruvate sulf 99.7 2.3E-18 8E-23 151.5 6.8 113 5-131 153-277 (280)
33 1qb0_A Protein (M-phase induce 99.7 6.3E-18 2.1E-22 143.9 9.0 111 4-130 44-167 (211)
34 3olh_A MST, 3-mercaptopyruvate 99.7 1.2E-17 4E-22 149.3 10.3 117 4-130 22-155 (302)
35 3olh_A MST, 3-mercaptopyruvate 99.7 5.6E-18 1.9E-22 151.4 6.7 99 31-130 189-299 (302)
36 1rhs_A Sulfur-substituted rhod 99.7 1.1E-17 3.7E-22 148.7 8.4 113 5-131 161-287 (296)
37 2ouc_A Dual specificity protei 99.7 5E-18 1.7E-22 133.9 4.8 119 5-131 2-137 (142)
38 3aay_A Putative thiosulfate su 99.7 1.7E-17 5.7E-22 145.7 7.4 113 5-131 7-124 (277)
39 1rhs_A Sulfur-substituted rhod 99.7 5.2E-17 1.8E-21 144.3 10.0 118 3-130 7-140 (296)
40 1uar_A Rhodanese; sulfurtransf 99.7 9.4E-18 3.2E-22 147.8 5.1 113 4-130 8-125 (285)
41 1hzm_A Dual specificity protei 99.7 1.1E-17 3.9E-22 134.5 4.3 109 4-127 16-143 (154)
42 3tp9_A Beta-lactamase and rhod 99.7 4.7E-17 1.6E-21 153.2 8.8 86 31-131 388-473 (474)
43 1uar_A Rhodanese; sulfurtransf 99.7 7.2E-17 2.5E-21 142.1 9.3 115 6-131 148-281 (285)
44 1yt8_A Thiosulfate sulfurtrans 99.7 4.6E-17 1.6E-21 156.1 8.3 104 2-130 5-108 (539)
45 3tg1_B Dual specificity protei 99.7 1.3E-16 4.3E-21 129.7 9.2 117 4-128 11-144 (158)
46 3f4a_A Uncharacterized protein 99.7 1.2E-17 4E-22 137.8 2.7 117 4-129 31-155 (169)
47 3hzu_A Thiosulfate sulfurtrans 99.7 1.2E-16 4E-21 143.9 8.6 95 34-131 194-307 (318)
48 3aay_A Putative thiosulfate su 99.7 9.7E-17 3.3E-21 140.8 6.6 96 35-131 160-274 (277)
49 2eg4_A Probable thiosulfate su 99.6 5E-16 1.7E-20 133.0 8.9 89 32-131 131-229 (230)
50 1okg_A Possible 3-mercaptopyru 99.6 1.4E-16 4.7E-21 146.6 5.7 97 33-131 28-142 (373)
51 2wlr_A Putative thiosulfate su 99.6 4.3E-16 1.5E-20 145.1 8.8 100 31-131 286-405 (423)
52 3ntd_A FAD-dependent pyridine 99.6 6.3E-16 2.1E-20 147.6 9.9 91 18-127 475-565 (565)
53 3ics_A Coenzyme A-disulfide re 99.6 3.5E-16 1.2E-20 150.5 7.9 81 31-127 502-582 (588)
54 2wlr_A Putative thiosulfate su 99.6 4.1E-16 1.4E-20 145.2 7.5 121 5-131 125-249 (423)
55 1yt8_A Thiosulfate sulfurtrans 99.6 3.6E-16 1.2E-20 149.9 6.7 101 4-132 377-477 (539)
56 1okg_A Possible 3-mercaptopyru 99.5 4.3E-15 1.5E-19 136.6 4.7 101 30-131 172-293 (373)
57 2gwf_A Ubiquitin carboxyl-term 99.5 6.4E-15 2.2E-19 119.7 5.1 111 4-130 20-149 (157)
58 1whb_A KIAA0055; deubiqutinati 99.5 1E-14 3.5E-19 118.3 5.9 111 4-130 15-144 (157)
59 3r2u_A Metallo-beta-lactamase 99.5 1.1E-15 3.8E-20 144.1 0.0 80 31-125 386-465 (466)
60 2eg4_A Probable thiosulfate su 99.5 8.2E-15 2.8E-19 125.4 5.1 89 30-125 4-98 (230)
61 3utn_X Thiosulfate sulfurtrans 99.4 3E-13 1E-17 122.4 9.3 114 5-130 29-158 (327)
62 3utn_X Thiosulfate sulfurtrans 99.4 4.2E-13 1.4E-17 121.4 7.8 98 31-129 202-319 (327)
63 3tp9_A Beta-lactamase and rhod 99.4 1.6E-13 5.5E-18 129.1 5.1 111 4-144 273-398 (474)
64 3r2u_A Metallo-beta-lactamase 99.1 9.2E-11 3.1E-15 110.4 5.6 102 30-146 294-398 (466)
65 2f46_A Hypothetical protein; s 97.0 0.00033 1.1E-08 55.9 3.2 86 4-110 28-128 (156)
66 1v8c_A MOAD related protein; r 93.9 0.012 4.1E-07 47.8 0.5 48 5-60 95-145 (168)
67 2fqh_A Hypothetical protein TA 84.5 0.35 1.2E-05 35.4 1.4 35 169-207 17-51 (109)
68 4erc_A Dual specificity protei 77.4 1.9 6.5E-05 32.6 3.6 26 86-111 89-117 (150)
69 4aor_D Trypsin inhibitor 3; hy 67.2 1.8 6.1E-05 25.4 0.8 16 207-222 18-33 (37)
70 2vpb_A Hpygo1, pygopus homolog 65.3 1.4 4.8E-05 29.8 0.2 34 166-210 5-39 (65)
71 1k81_A EIF-2-beta, probable tr 64.5 2.4 8.3E-05 25.2 1.1 29 171-205 2-30 (36)
72 1we9_A PHD finger family prote 63.5 4.4 0.00015 26.7 2.4 32 169-211 6-37 (64)
73 1jl3_A Arsenate reductase; alp 55.3 11 0.00037 28.7 3.7 34 87-120 5-39 (139)
74 3rof_A Low molecular weight pr 55.0 6.6 0.00023 31.0 2.5 37 87-123 8-49 (158)
75 2xb1_A Pygopus homolog 2, B-ce 53.7 5.2 0.00018 29.5 1.5 31 169-210 3-34 (105)
76 1u2p_A Ptpase, low molecular w 52.8 7 0.00024 30.7 2.3 37 87-123 6-48 (163)
77 1jf8_A Arsenate reductase; ptp 51.7 13 0.00046 28.0 3.7 34 87-120 5-39 (131)
78 2kgg_A Histone demethylase jar 51.1 8.2 0.00028 24.4 2.0 30 171-211 4-34 (52)
79 2img_A Dual specificity protei 50.0 13 0.00046 27.6 3.5 25 86-110 90-117 (151)
80 2l17_A Synarsc, arsenate reduc 48.9 19 0.00064 27.2 4.2 35 87-121 6-41 (134)
81 3rh0_A Arsenate reductase; oxi 47.8 13 0.00044 28.9 3.1 34 87-120 22-56 (148)
82 2cwd_A Low molecular weight ph 46.8 10 0.00035 29.8 2.3 38 87-124 6-49 (161)
83 3ezz_A Dual specificity protei 46.8 15 0.0005 27.5 3.2 25 86-110 82-109 (144)
84 3lqh_A Histone-lysine N-methyl 46.3 7.4 0.00025 31.6 1.5 33 171-211 4-36 (183)
85 1d1q_A Tyrosine phosphatase (E 46.0 7 0.00024 30.7 1.3 38 86-123 8-52 (161)
86 2jgn_A DBX, DDX3, ATP-dependen 43.6 20 0.00068 28.2 3.7 35 87-122 48-82 (185)
87 2hjv_A ATP-dependent RNA helic 43.0 16 0.00055 27.9 3.0 34 87-121 37-70 (163)
88 2rb4_A ATP-dependent RNA helic 42.6 15 0.00052 28.4 2.8 34 87-121 36-69 (175)
89 4g29_A Secreted effector prote 42.3 5.6 0.00019 32.2 0.2 42 99-142 47-97 (186)
90 1wee_A PHD finger family prote 40.5 15 0.00053 24.7 2.2 34 166-211 13-46 (72)
91 1fuk_A Eukaryotic initiation f 40.3 21 0.0007 27.3 3.2 34 87-121 32-65 (165)
92 3jvi_A Protein tyrosine phosph 40.3 8.9 0.0003 30.2 1.0 37 87-123 6-48 (161)
93 1nee_A EIF-2-beta, probable tr 40.2 11 0.00037 29.3 1.5 31 169-205 102-132 (138)
94 3n8i_A Low molecular weight ph 39.1 7.4 0.00025 30.6 0.4 38 86-123 6-49 (157)
95 2d74_B Translation initiation 38.7 11 0.00038 29.6 1.3 31 169-205 104-134 (148)
96 4etn_A LMPTP, low molecular we 38.3 7.9 0.00027 31.4 0.4 38 86-124 35-77 (184)
97 1t5i_A C_terminal domain of A 37.8 22 0.00074 27.6 3.0 34 87-121 33-66 (172)
98 3rgo_A Protein-tyrosine phosph 37.8 28 0.00094 26.1 3.6 26 86-111 90-118 (157)
99 2nt2_A Protein phosphatase sli 37.0 34 0.0012 25.5 4.0 25 86-110 82-109 (145)
100 3s4e_A Dual specificity protei 36.4 22 0.00077 26.5 2.8 26 86-111 82-110 (144)
101 3cw2_K Translation initiation 36.1 11 0.00038 29.3 1.0 32 168-205 102-133 (139)
102 1p8a_A Protein tyrosine phosph 35.1 3.3 0.00011 32.0 -2.3 37 87-123 6-43 (146)
103 1wep_A PHF8; structural genomi 34.6 11 0.00038 25.9 0.7 26 169-206 12-37 (79)
104 2yt5_A Metal-response element- 34.5 27 0.00093 22.8 2.6 33 169-211 6-38 (66)
105 2wmy_A WZB, putative acid phos 34.5 28 0.00096 26.8 3.1 33 87-120 10-43 (150)
106 3eaq_A Heat resistant RNA depe 33.8 25 0.00085 28.3 2.8 34 87-121 33-66 (212)
107 2e0t_A Dual specificity phosph 33.6 32 0.0011 25.7 3.3 25 86-110 86-113 (151)
108 1y1l_A Arsenate reductase (ARS 33.6 27 0.00091 26.0 2.8 22 88-109 2-24 (124)
109 2fek_A Low molecular weight pr 33.3 33 0.0011 27.1 3.4 34 87-121 24-58 (167)
110 2hcm_A Dual specificity protei 33.2 45 0.0015 25.4 4.2 25 86-110 90-117 (164)
111 2wja_A Putative acid phosphata 33.1 31 0.001 27.3 3.2 34 87-121 28-62 (168)
112 3t38_A Arsenate reductase; low 32.6 33 0.0011 28.3 3.4 35 86-120 82-117 (213)
113 2gi4_A Possible phosphotyrosin 32.5 33 0.0011 26.6 3.3 37 87-123 3-45 (156)
114 2p6n_A ATP-dependent RNA helic 32.4 29 0.00099 27.5 3.0 34 87-121 56-89 (191)
115 2q05_A Late protein H1, dual s 31.9 31 0.0011 27.5 3.1 26 86-111 126-154 (195)
116 3pur_A Lysine-specific demethy 31.7 22 0.00077 33.5 2.4 45 166-210 9-72 (528)
117 2r0b_A Serine/threonine/tyrosi 31.5 42 0.0014 25.1 3.7 26 86-111 91-119 (154)
118 2l8e_A Polyhomeotic-like prote 30.7 12 0.0004 23.8 0.2 12 169-180 18-29 (49)
119 1yz4_A DUSP15, dual specificit 30.1 48 0.0016 25.1 3.8 26 86-111 85-113 (160)
120 1xri_A AT1G05000; structural g 29.8 35 0.0012 25.5 2.9 26 86-111 93-120 (151)
121 1zzw_A Dual specificity protei 29.6 57 0.002 24.2 4.1 25 86-110 84-111 (149)
122 1dsz_A RAR-alpha, retinoic aci 29.1 25 0.00085 24.8 1.8 27 169-205 4-30 (86)
123 3o7a_A PHD finger protein 13 v 28.9 25 0.00086 22.0 1.6 18 194-211 16-33 (52)
124 4etm_A LMPTP, low molecular we 28.8 41 0.0014 26.6 3.3 38 87-124 20-63 (173)
125 1a6y_A Orphan nuclear receptor 28.8 26 0.00088 25.2 1.8 29 167-205 5-33 (94)
126 2k16_A Transcription initiatio 28.6 12 0.00041 25.4 -0.0 31 168-210 17-47 (75)
127 1wrm_A Dual specificity phosph 27.7 52 0.0018 25.1 3.7 25 86-110 84-111 (165)
128 4egs_A Ribose 5-phosphate isom 27.4 45 0.0015 26.6 3.3 37 86-123 35-76 (180)
129 2esb_A Dual specificity protei 27.1 57 0.0019 25.7 3.9 26 86-111 98-126 (188)
130 3o70_A PHD finger protein 13; 27.1 28 0.00095 23.3 1.7 31 168-211 18-48 (68)
131 2hxp_A Dual specificity protei 26.6 63 0.0022 24.4 4.0 25 86-110 86-113 (155)
132 2dip_A Zinc finger SWIM domain 26.3 29 0.001 25.1 1.8 33 170-206 32-65 (98)
133 2e5r_A Dystrobrevin alpha; ZZ 25.4 37 0.0013 22.4 2.0 33 170-206 12-45 (63)
134 1f62_A Transcription factor WS 24.9 16 0.00056 22.7 0.1 27 171-209 2-28 (51)
135 1xwh_A Autoimmune regulator; P 24.6 46 0.0016 21.9 2.4 27 169-210 8-34 (66)
136 3ohg_A Uncharacterized protein 24.5 85 0.0029 27.0 4.7 26 95-120 218-243 (285)
137 1ovx_A ATP-dependent CLP prote 24.4 31 0.001 23.4 1.4 31 170-205 19-49 (67)
138 1wew_A DNA-binding family prot 24.3 48 0.0017 22.6 2.5 28 166-194 13-40 (78)
139 2ds5_A CLPX, ATP-dependent CLP 24.0 38 0.0013 21.5 1.8 31 170-205 12-42 (51)
140 3cbb_A HNF-4-alpha, hepatocyte 23.9 36 0.0012 23.5 1.8 25 171-205 2-26 (78)
141 1cit_A NGFI-B, protein (orphan 23.5 38 0.0013 24.0 1.9 25 171-205 2-26 (89)
142 3f81_A Dual specificity protei 23.2 63 0.0022 24.9 3.4 25 86-110 116-143 (183)
143 1kb2_A Vitamin D3 receptor; VD 23.0 37 0.0013 25.1 1.8 27 169-205 6-32 (110)
144 1wev_A Riken cDNA 1110020M19; 22.5 41 0.0014 23.6 1.9 31 170-210 17-47 (88)
145 2ebl_A COUP transcription fact 22.1 53 0.0018 23.2 2.4 28 169-206 7-34 (89)
146 2wgp_A Dual specificity protei 21.9 76 0.0026 25.0 3.7 25 86-110 104-131 (190)
147 2i4i_A ATP-dependent RNA helic 21.8 74 0.0025 27.5 3.9 35 86-121 277-311 (417)
148 1lv3_A Hypothetical protein YA 21.7 35 0.0012 23.2 1.3 37 168-223 8-44 (68)
149 2ri7_A Nucleosome-remodeling f 21.5 17 0.00057 28.7 -0.4 11 169-180 8-18 (174)
150 1hcq_A Protein (estrogen recep 21.3 51 0.0018 23.0 2.2 28 169-206 4-31 (84)
151 2yjt_D ATP-dependent RNA helic 26.8 20 0.00068 27.6 0.0 35 87-122 32-66 (170)
152 1z2q_A LM5-1; membrane protein 21.3 95 0.0032 21.3 3.6 38 164-205 16-54 (84)
153 1e7l_A GP49, recombination end 20.9 41 0.0014 26.6 1.8 37 169-205 20-64 (157)
154 1mm2_A MI2-beta; PHD, zinc fin 20.9 56 0.0019 21.1 2.2 28 169-211 9-36 (61)
155 2e6r_A Jumonji/ARID domain-con 20.9 46 0.0016 23.6 1.9 29 170-210 17-45 (92)
156 3s4o_A Protein tyrosine phosph 20.6 1.2E+02 0.0039 22.6 4.4 26 86-111 110-138 (167)
157 2v1x_A ATP-dependent DNA helic 20.4 65 0.0022 30.4 3.4 35 86-121 268-302 (591)
158 2oud_A Dual specificity protei 20.1 87 0.003 24.2 3.6 25 86-110 88-115 (177)
159 3i32_A Heat resistant RNA depe 20.1 49 0.0017 28.4 2.3 33 87-120 30-62 (300)
160 1wem_A Death associated transc 20.1 19 0.00064 24.5 -0.4 27 169-208 16-42 (76)
161 2han_A Protein ultraspiracle; 20.0 50 0.0017 23.6 1.9 28 168-205 9-36 (93)
No 1
>4f67_A UPF0176 protein LPG2838; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium; 1.79A {Legionella pneumophila subsp}
Probab=99.95 E-value=2.2e-29 Score=222.16 Aligned_cols=125 Identities=37% Similarity=0.729 Sum_probs=104.8
Q ss_pred CCCCCHHHHHHHhhcCCchhhhhcccCCCCeEEEEcCCchhhhcccCCCcccCCccccccccCCcchhhhhccCCccCCC
Q 025834 3 AIPLAPSEWRNKLEAGKDIDKASNSDLNRDFILLDVRNGYEWDIGHFHGARRPDVDCFRSTSFGLSQREAFASDPLADLD 82 (247)
Q Consensus 3 a~~Lsp~e~~~~l~~~~~~~l~~~~~~~~~~vvIDvRn~~E~~~GhipGAi~i~~~~~~~~~~~~~~~~~~~~~~l~~l~ 82 (247)
.+.|+|++|.+++.+ ++++|||||+++||+.||||||+|+|+..|++++.+. .. .+ ..+
T Consensus 121 ~~~Is~~el~~ll~~-------------~~~vlIDVR~~~Ey~~GHIpGAiniP~~~~~~~~~~l-----~~--~l-~~~ 179 (265)
T 4f67_A 121 GTYLSPEEWHQFIQD-------------PNVILLDTRNDYEYELGTFKNAINPDIENFREFPDYV-----QR--NL-IDK 179 (265)
T ss_dssp TCEECHHHHHHHTTC-------------TTSEEEECSCHHHHHHEEETTCBCCCCSSGGGHHHHH-----HH--HT-GGG
T ss_pred CceECHHHHHHHhcC-------------CCeEEEEeCCchHhhcCcCCCCEeCCHHHHHhhHHHH-----HH--hh-hhC
Confidence 467889999988875 6899999999999999999999999999887643111 00 01 124
Q ss_pred CCCceEEEEeCCCchHHHHHHHHHHcCCCcEEEccchHHHHHHCcCC--ceeecceeEEeeeeecCCCC
Q 025834 83 KEKTDILMYCTGGIRCDVYSTILRQRGFHNLYTLKGGVSHYLENEGP--VEWVGNLFVFDSRLSLPPSA 149 (247)
Q Consensus 83 k~~~~Iv~YCtgG~R~e~aa~~L~~~Gf~nV~~L~GGi~~w~~~g~~--~~~~G~~fvFD~R~~~~~~~ 149 (247)
+++ +||+||++|+||++++++|++.||++|++|+|||.+|.++..+ ..|+|+|||||+|++|+++.
T Consensus 180 kdk-~IVvyC~~G~RS~~Aa~~L~~~Gf~nV~~L~GGi~aW~~~~~~~~~~w~G~~fVFD~R~~~~~~l 247 (265)
T 4f67_A 180 KDK-KIAMFCTGGIRCEKTTAYMKELGFEHVYQLHDGILNYLESIPESESLWEGKCFVFDDRVAVDQKL 247 (265)
T ss_dssp TTS-CEEEECSSSHHHHHHHHHHHHHTCSSEEEETTHHHHHHHHSCTTTCCEEECEECSSTTCEECTTS
T ss_pred CCC-eEEEEeCCChHHHHHHHHHHHcCCCCEEEecCHHHHHHHhcCcccccccCcceeEcCccccccCH
Confidence 444 7999999999999999999999999999999999999987654 47999999999999999765
No 2
>3iwh_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics, C structural genomics of infectious diseases, csgid; 2.00A {Staphylococcus aureus subsp} PDB: 3mzz_A
Probab=99.89 E-value=1.2e-23 Score=160.50 Aligned_cols=99 Identities=21% Similarity=0.391 Sum_probs=84.0
Q ss_pred CCCHHHHHHHhhcCCchhhhhcccCCCCeEEEEcCCchhhhcccCCCcccCCccccccccCCcchhhhhccCCccCCCCC
Q 025834 5 PLAPSEWRNKLEAGKDIDKASNSDLNRDFILLDVRNGYEWDIGHFHGARRPDVDCFRSTSFGLSQREAFASDPLADLDKE 84 (247)
Q Consensus 5 ~Lsp~e~~~~l~~~~~~~l~~~~~~~~~~vvIDvRn~~E~~~GhipGAi~i~~~~~~~~~~~~~~~~~~~~~~l~~l~k~ 84 (247)
.||+++++++|.+ +++++|||||++.||+.||||||+|+|...|.+ .+..++++
T Consensus 3 ~Is~~el~~~l~~------------~~~~~liDvR~~~e~~~ghIpgA~~ip~~~l~~--------------~~~~l~~~ 56 (103)
T 3iwh_A 3 SITTDELKNKLLE------------SKPVQIVDVRTDEETAMGYIPNAKLIPMDTIPD--------------NLNSFNKN 56 (103)
T ss_dssp EECHHHHHHGGGS------------SSCCEEEECSCHHHHTTCBCTTCEECCGGGGGG--------------CGGGCCTT
T ss_pred CcCHHHHHHHHhC------------CCCeEEEECCChhHHhcCccCCcccCcccchhh--------------hhhhhcCC
Confidence 5788888887765 467999999999999999999999999887642 12345666
Q ss_pred CceEEEEeCCCchHHHHHHHHHHcCCCcEEEccchHHHHHHCcCCce
Q 025834 85 KTDILMYCTGGIRCDVYSTILRQRGFHNLYTLKGGVSHYLENEGPVE 131 (247)
Q Consensus 85 ~~~Iv~YCtgG~R~e~aa~~L~~~Gf~nV~~L~GGi~~w~~~g~~~~ 131 (247)
+ +||+||.+|.||..++.+|++.||++ +.|.||+.+|.++|+|++
T Consensus 57 ~-~ivv~C~~G~rS~~aa~~L~~~G~~~-~~l~GG~~~W~~~g~pve 101 (103)
T 3iwh_A 57 E-IYYIVCAGGVRSAKVVEYLEANGIDA-VNVEGGMHAWGDEGLEIK 101 (103)
T ss_dssp S-EEEEECSSSSHHHHHHHHHHTTTCEE-EEETTHHHHHCSSSCBCC
T ss_pred C-eEEEECCCCHHHHHHHHHHHHcCCCE-EEecChHHHHHHCCCcce
Confidence 4 89999999999999999999999965 479999999999999864
No 3
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=99.89 E-value=2.5e-23 Score=156.85 Aligned_cols=99 Identities=19% Similarity=0.317 Sum_probs=84.6
Q ss_pred CCCCHHHHHHHhhcCCchhhhhcccCCCCeEEEEcCCchhhhcccCCCcccCCccccccccCCcchhhhhccCCccCCCC
Q 025834 4 IPLAPSEWRNKLEAGKDIDKASNSDLNRDFILLDVRNGYEWDIGHFHGARRPDVDCFRSTSFGLSQREAFASDPLADLDK 83 (247)
Q Consensus 4 ~~Lsp~e~~~~l~~~~~~~l~~~~~~~~~~vvIDvRn~~E~~~GhipGAi~i~~~~~~~~~~~~~~~~~~~~~~l~~l~k 83 (247)
+.|+++++.+++++ +++++|||||++.||..||||||+|+|...+.+ .+..+++
T Consensus 2 ~~is~~el~~~l~~------------~~~~~liDvR~~~e~~~ghIpgA~~ip~~~l~~--------------~~~~l~~ 55 (100)
T 3foj_A 2 ESITVTELKEKILD------------ANPVNIVDVRTDQETAMGIIPGAETIPMNSIPD--------------NLNYFND 55 (100)
T ss_dssp CEECHHHHHHGGGS------------SSCCEEEECSCHHHHTTCBCTTCEECCGGGGGG--------------CGGGSCT
T ss_pred CccCHHHHHHHHhc------------CCCcEEEECCCHHHHhcCcCCCCEECCHHHHHH--------------HHHhCCC
Confidence 35788888888753 368999999999999999999999999987642 1233556
Q ss_pred CCceEEEEeCCCchHHHHHHHHHHcCCCcEEEccchHHHHHHCcCCc
Q 025834 84 EKTDILMYCTGGIRCDVYSTILRQRGFHNLYTLKGGVSHYLENEGPV 130 (247)
Q Consensus 84 ~~~~Iv~YCtgG~R~e~aa~~L~~~Gf~nV~~L~GGi~~w~~~g~~~ 130 (247)
++ +||+||.+|.|+..++..|++.|| +|+.|+||+.+|.++|+|+
T Consensus 56 ~~-~ivvyC~~g~rs~~a~~~L~~~G~-~v~~l~GG~~~W~~~g~pv 100 (100)
T 3foj_A 56 NE-TYYIICKAGGRSAQVVQYLEQNGV-NAVNVEGGMDEFGDEGLEH 100 (100)
T ss_dssp TS-EEEEECSSSHHHHHHHHHHHTTTC-EEEEETTHHHHHCSSSCBC
T ss_pred CC-cEEEEcCCCchHHHHHHHHHHCCC-CEEEecccHHHHHHcCCCC
Confidence 54 799999999999999999999999 9999999999999998874
No 4
>3eme_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics; 2.00A {Staphylococcus aureus subsp} PDB: 3iwh_A 3mzz_A
Probab=99.88 E-value=5.2e-23 Score=155.77 Aligned_cols=100 Identities=21% Similarity=0.388 Sum_probs=85.3
Q ss_pred CCCCHHHHHHHhhcCCchhhhhcccCCCCeEEEEcCCchhhhcccCCCcccCCccccccccCCcchhhhhccCCccCCCC
Q 025834 4 IPLAPSEWRNKLEAGKDIDKASNSDLNRDFILLDVRNGYEWDIGHFHGARRPDVDCFRSTSFGLSQREAFASDPLADLDK 83 (247)
Q Consensus 4 ~~Lsp~e~~~~l~~~~~~~l~~~~~~~~~~vvIDvRn~~E~~~GhipGAi~i~~~~~~~~~~~~~~~~~~~~~~l~~l~k 83 (247)
+.|+++++.+++.+ +++++|||||++.||..||||||+|+|...|.+. +..+++
T Consensus 2 ~~is~~el~~~l~~------------~~~~~liDvR~~~e~~~ghIpgA~~ip~~~l~~~--------------~~~l~~ 55 (103)
T 3eme_A 2 KSITTDELKNKLLE------------SKPVQIVDVRTDEETAMGYIPNAKLIPMDTIPDN--------------LNSFNK 55 (103)
T ss_dssp CEECHHHHHHGGGS------------SSCCEEEECSCHHHHTTCBCTTCEECCGGGGGGC--------------GGGCCT
T ss_pred CccCHHHHHHHHhc------------CCCCEEEECCCHHHHhcCcCCCCEEcCHHHHHHH--------------HHhCCC
Confidence 35788888888753 3689999999999999999999999999876421 223556
Q ss_pred CCceEEEEeCCCchHHHHHHHHHHcCCCcEEEccchHHHHHHCcCCce
Q 025834 84 EKTDILMYCTGGIRCDVYSTILRQRGFHNLYTLKGGVSHYLENEGPVE 131 (247)
Q Consensus 84 ~~~~Iv~YCtgG~R~e~aa~~L~~~Gf~nV~~L~GGi~~w~~~g~~~~ 131 (247)
++ +||+||.+|.|+..++..|++.|| +|+.|+||+.+|.++++|++
T Consensus 56 ~~-~iv~yC~~g~rs~~a~~~L~~~G~-~v~~l~GG~~~W~~~g~p~~ 101 (103)
T 3eme_A 56 NE-IYYIVCAGGVRSAKVVEYLEANGI-DAVNVEGGMHAWGDEGLEIK 101 (103)
T ss_dssp TS-EEEEECSSSSHHHHHHHHHHTTTC-EEEEETTHHHHHCSSSCBCC
T ss_pred CC-eEEEECCCChHHHHHHHHHHHCCC-CeEEeCCCHHHHHHCCCcCC
Confidence 54 899999999999999999999999 99999999999999998854
No 5
>1gmx_A GLPE protein; transferase, rhodanese, sulfurtransferase, glycerol metabolism; 1.1A {Escherichia coli} SCOP: c.46.1.3 PDB: 1gn0_A
Probab=99.86 E-value=1.5e-22 Score=154.44 Aligned_cols=101 Identities=21% Similarity=0.368 Sum_probs=86.2
Q ss_pred CCCCCHHHHHHHhhcCCchhhhhcccCCCCeEEEEcCCchhhhcccCCCcccCCccccccccCCcchhhhhccCCccCCC
Q 025834 3 AIPLAPSEWRNKLEAGKDIDKASNSDLNRDFILLDVRNGYEWDIGHFHGARRPDVDCFRSTSFGLSQREAFASDPLADLD 82 (247)
Q Consensus 3 a~~Lsp~e~~~~l~~~~~~~l~~~~~~~~~~vvIDvRn~~E~~~GhipGAi~i~~~~~~~~~~~~~~~~~~~~~~l~~l~ 82 (247)
.+.|+++++.+++++ ++++|||||++.||..||||||+|+|...|.+. +..++
T Consensus 4 ~~~i~~~~l~~~~~~-------------~~~~liDvR~~~e~~~ghIpgA~~ip~~~l~~~--------------~~~l~ 56 (108)
T 1gmx_A 4 FECINVADAHQKLQE-------------KEAVLVDIRDPQSFAMGHAVQAFHLTNDTLGAF--------------MRDND 56 (108)
T ss_dssp CEEECHHHHHHHHHT-------------TCCEEEECSCHHHHHHCEETTCEECCHHHHHHH--------------HHHSC
T ss_pred ccccCHHHHHHHHhC-------------CCCEEEEcCCHHHHHhCCCccCEeCCHHHHHHH--------------HHhcC
Confidence 467899999998875 568999999999999999999999998766421 11245
Q ss_pred CCCceEEEEeCCCchHHHHHHHHHHcCCCcEEEccchHHHHHHCcCCcee
Q 025834 83 KEKTDILMYCTGGIRCDVYSTILRQRGFHNLYTLKGGVSHYLENEGPVEW 132 (247)
Q Consensus 83 k~~~~Iv~YCtgG~R~e~aa~~L~~~Gf~nV~~L~GGi~~w~~~g~~~~~ 132 (247)
+++ +||+||.+|.|+..++..|++.||++|+.|+||+.+|.++ +|+..
T Consensus 57 ~~~-~ivvyc~~g~rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~-~p~~~ 104 (108)
T 1gmx_A 57 FDT-PVMVMCYHGNSSKGAAQYLLQQGYDVVYSIDGGFEAWQRQ-FPAEV 104 (108)
T ss_dssp TTS-CEEEECSSSSHHHHHHHHHHHHTCSSEEEETTHHHHHHHH-CGGGE
T ss_pred CCC-CEEEEcCCCchHHHHHHHHHHcCCceEEEecCCHHHHHHh-CCccc
Confidence 554 7999999999999999999999999999999999999988 77653
No 6
>3gk5_A Uncharacterized rhodanese-related protein TVG0868615; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Thermoplasma volcanium GSS1}
Probab=99.86 E-value=3.7e-22 Score=152.80 Aligned_cols=97 Identities=22% Similarity=0.431 Sum_probs=82.0
Q ss_pred CCCCHHHHHHHhhcCCchhhhhcccCCCCeEEEEcCCchhhhcccCCCcccCCccccccccCCcchhhhhccCCccCCCC
Q 025834 4 IPLAPSEWRNKLEAGKDIDKASNSDLNRDFILLDVRNGYEWDIGHFHGARRPDVDCFRSTSFGLSQREAFASDPLADLDK 83 (247)
Q Consensus 4 ~~Lsp~e~~~~l~~~~~~~l~~~~~~~~~~vvIDvRn~~E~~~GhipGAi~i~~~~~~~~~~~~~~~~~~~~~~l~~l~k 83 (247)
+.|+++++.+++. . ++|||||++.||+.||||||+|+|...|.+. +..+++
T Consensus 4 ~~is~~el~~~l~--------------~-~~iiDvR~~~e~~~ghIpgA~~ip~~~l~~~--------------~~~l~~ 54 (108)
T 3gk5_A 4 RSINAADLYENIK--------------A-YTVLDVREPFELIFGSIANSINIPISELREK--------------WKILER 54 (108)
T ss_dssp CEECHHHHHHTTT--------------T-CEEEECSCHHHHTTCBCTTCEECCHHHHHHH--------------GGGSCT
T ss_pred cEeCHHHHHHHHc--------------C-CEEEECCCHHHHhcCcCCCCEEcCHHHHHHH--------------HHhCCC
Confidence 4577777777664 2 7999999999999999999999999876421 223456
Q ss_pred CCceEEEEeCCCchHHHHHHHHHHcCCCcEEEccchHHHHHHCcCCce
Q 025834 84 EKTDILMYCTGGIRCDVYSTILRQRGFHNLYTLKGGVSHYLENEGPVE 131 (247)
Q Consensus 84 ~~~~Iv~YCtgG~R~e~aa~~L~~~Gf~nV~~L~GGi~~w~~~g~~~~ 131 (247)
++ +||+||.+|.|+..++..|+++|| +|+.|+||+.+|.+++.++.
T Consensus 55 ~~-~ivvyC~~G~rs~~aa~~L~~~G~-~v~~l~GG~~~W~~~~~~~~ 100 (108)
T 3gk5_A 55 DK-KYAVICAHGNRSAAAVEFLSQLGL-NIVDVEGGIQSWIEEGYPVV 100 (108)
T ss_dssp TS-CEEEECSSSHHHHHHHHHHHTTTC-CEEEETTHHHHHHHTTCCCB
T ss_pred CC-eEEEEcCCCcHHHHHHHHHHHcCC-CEEEEcCcHHHHHHcCCCCC
Confidence 54 799999999999999999999999 99999999999999998853
No 7
>3d1p_A Putative thiosulfate sulfurtransferase YOR285W; atomic structure, atomic resolution structure, PSI, MCSG; HET: MSE; 0.98A {Saccharomyces cerevisiae}
Probab=99.86 E-value=1.4e-21 Score=155.34 Aligned_cols=114 Identities=17% Similarity=0.291 Sum_probs=86.7
Q ss_pred CCCCHHHHHHHhhcCCchhhhhcccCCCCeEEEEcCCchhhhcccCCCcccCCccccccccCCcchhhhhccCCccCCCC
Q 025834 4 IPLAPSEWRNKLEAGKDIDKASNSDLNRDFILLDVRNGYEWDIGHFHGARRPDVDCFRSTSFGLSQREAFASDPLADLDK 83 (247)
Q Consensus 4 ~~Lsp~e~~~~l~~~~~~~l~~~~~~~~~~vvIDvRn~~E~~~GhipGAi~i~~~~~~~~~~~~~~~~~~~~~~l~~l~k 83 (247)
..|+++++.++++.. +++++|||||++.||..||||||+|+|...+.+.. .....++........+++
T Consensus 23 ~~is~~el~~~l~~~-----------~~~~~liDvR~~~e~~~ghIpgAinip~~~l~~~~-~~~~~~~~~~~~~~~~~~ 90 (139)
T 3d1p_A 23 QSYSFEDMKRIVGKH-----------DPNVVLVDVREPSEYSIVHIPASINVPYRSHPDAF-ALDPLEFEKQIGIPKPDS 90 (139)
T ss_dssp EECCHHHHHHHHHHT-----------CTTEEEEECSCHHHHHHCCCTTCEECCTTTCTTGG-GSCHHHHHHHHSSCCCCT
T ss_pred ceecHHHHHHHHhCC-----------CCCeEEEECcCHHHHhCCCCCCcEEcCHHHhhhhc-cCCHHHHHHHHhccCCCC
Confidence 357777777777631 25799999999999999999999999998774311 111111111101123455
Q ss_pred CCceEEEEeCCCchHHHHHHHHHHcCCCcEEEccchHHHHHHCcCCc
Q 025834 84 EKTDILMYCTGGIRCDVYSTILRQRGFHNLYTLKGGVSHYLENEGPV 130 (247)
Q Consensus 84 ~~~~Iv~YCtgG~R~e~aa~~L~~~Gf~nV~~L~GGi~~w~~~g~~~ 130 (247)
++ +||+||.+|.|+..++..|++.||++|+.|+||+.+|.++++|+
T Consensus 91 ~~-~ivvyC~~G~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~ 136 (139)
T 3d1p_A 91 AK-ELIFYCASGKRGGEAQKVASSHGYSNTSLYPGSMNDWVSHGGDK 136 (139)
T ss_dssp TS-EEEEECSSSHHHHHHHHHHHTTTCCSEEECTTHHHHHHHTTGGG
T ss_pred CC-eEEEECCCCchHHHHHHHHHHcCCCCeEEeCCcHHHHHHcCCCC
Confidence 54 79999999999999999999999999999999999999999875
No 8
>2hhg_A Hypothetical protein RPA3614; MCSG, structural genomics, rohopseudom palustris, PSI-2, protein structure initiative; 1.20A {Rhodopseudomonas palustris}
Probab=99.86 E-value=9e-22 Score=156.21 Aligned_cols=94 Identities=19% Similarity=0.409 Sum_probs=76.1
Q ss_pred CCeEEEEcCCchhhhc-ccCCCcccCCccccccccCCcchhhhhccCCccCCCCCCceEEEEeCCCchHHHHHHHHHHcC
Q 025834 31 RDFILLDVRNGYEWDI-GHFHGARRPDVDCFRSTSFGLSQREAFASDPLADLDKEKTDILMYCTGGIRCDVYSTILRQRG 109 (247)
Q Consensus 31 ~~~vvIDvRn~~E~~~-GhipGAi~i~~~~~~~~~~~~~~~~~~~~~~l~~l~k~~~~Iv~YCtgG~R~e~aa~~L~~~G 109 (247)
++++|||||++.||.. ||||||+|+|...+....... .......+++++ +||+||.+|.||..+++.|++.|
T Consensus 38 ~~~~liDvR~~~e~~~~ghIpgA~~ip~~~l~~~~~~~------~~~~~~~~~~~~-~ivvyC~~G~rs~~a~~~L~~~G 110 (139)
T 2hhg_A 38 SDVVIVDIRDPREIERDGKIPGSFSCTRGMLEFWIDPQ------SPYAKPIFQEDK-KFVFYCAGGLRSALAAKTAQDMG 110 (139)
T ss_dssp TTEEEEECSCHHHHHHHCCCTTCEECCGGGHHHHHCTT------STTCCGGGGSSS-EEEEECSSSHHHHHHHHHHHHHT
T ss_pred CCeEEEECCCHHHHHhCCCCCCeEECChHHHHHhcCcc------chhhhccCCCCC-eEEEECCCChHHHHHHHHHHHcC
Confidence 6799999999999998 999999999998664210000 001122345554 79999999999999999999999
Q ss_pred CCcEEEccchHHHHHHCcCCce
Q 025834 110 FHNLYTLKGGVSHYLENEGPVE 131 (247)
Q Consensus 110 f~nV~~L~GGi~~w~~~g~~~~ 131 (247)
|++|++|+||+.+|.++++|+.
T Consensus 111 ~~~v~~l~GG~~~W~~~g~p~~ 132 (139)
T 2hhg_A 111 LKPVAHIEGGFGAWRDAGGPIE 132 (139)
T ss_dssp CCSEEEETTHHHHHHHTTCCCC
T ss_pred CCCeEEecCCHHHHHHCCCCee
Confidence 9999999999999999998864
No 9
>3ilm_A ALR3790 protein; rhodanese-like, NSR437H, NESG, structural genomics, protein structure initiative, northeast structural genomics consortium; 2.26A {Nostoc SP} PDB: 2kl3_A
Probab=99.85 E-value=1.7e-21 Score=156.26 Aligned_cols=102 Identities=29% Similarity=0.497 Sum_probs=86.6
Q ss_pred CCHHHHHHHhhcCCchhhhhcccCCCCeEEEEcCCchhhhcccCCCcccCCccccccccCCcchhhhhccCCccCCCCCC
Q 025834 6 LAPSEWRNKLEAGKDIDKASNSDLNRDFILLDVRNGYEWDIGHFHGARRPDVDCFRSTSFGLSQREAFASDPLADLDKEK 85 (247)
Q Consensus 6 Lsp~e~~~~l~~~~~~~l~~~~~~~~~~vvIDvRn~~E~~~GhipGAi~i~~~~~~~~~~~~~~~~~~~~~~l~~l~k~~ 85 (247)
|+++++.++++.. .++++|||||++.||..||||||+|+|...|.+. . ...+++++
T Consensus 2 Is~~el~~~l~~~-----------~~~~~liDvR~~~e~~~ghIpgAi~ip~~~l~~~--------~-----~~~l~~~~ 57 (141)
T 3ilm_A 2 SDAHVLKSRLEWG-----------EPAFTILDVRDRSTYNDGHIMGAMAMPIEDLVDR--------A-----SSSLEKSR 57 (141)
T ss_dssp CCHHHHHHHHHHS-----------CSCEEEEECSCHHHHHHCEETTCEECCGGGHHHH--------H-----HTTSCTTS
T ss_pred CCHHHHHHHHhcC-----------CCCEEEEECCCHHHHhCCCCCCCEEcCHHHHHHH--------H-----HhcCCCCC
Confidence 7889999988752 1469999999999999999999999999876421 1 12355654
Q ss_pred ceEEEEeCCCchHHHHHHHHHHcCCCcEEEccchHHHHHHCcCCcee
Q 025834 86 TDILMYCTGGIRCDVYSTILRQRGFHNLYTLKGGVSHYLENEGPVEW 132 (247)
Q Consensus 86 ~~Iv~YCtgG~R~e~aa~~L~~~Gf~nV~~L~GGi~~w~~~g~~~~~ 132 (247)
+||+||.+|.|+..+++.|+..||++|+.|+||+.+|.++++|+..
T Consensus 58 -~ivvyC~~g~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~ 103 (141)
T 3ilm_A 58 -DIYVYGAGDEQTSQAVNLLRSAGFEHVSELKGGLAAWKAIGGPTEG 103 (141)
T ss_dssp -EEEEECSSHHHHHHHHHHHHHTTCCSEEECTTHHHHHHHTTCCEEE
T ss_pred -eEEEEECCChHHHHHHHHHHHcCCCCEEEecCHHHHHHHCCCCccc
Confidence 7999999999999999999999999999999999999999999754
No 10
>3hix_A ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q8YQN0_anAsp, NSR437I, NESG, structural genomics, PSI-2, protein structure initiative; 1.92A {Anabaena SP} PDB: 3k9r_A
Probab=99.85 E-value=6.8e-22 Score=150.69 Aligned_cols=87 Identities=31% Similarity=0.548 Sum_probs=74.7
Q ss_pred CCeEEEEcCCchhhhcccCCCcccCCccccccccCCcchhhhhccCCccCCCCCCceEEEEeCCCchHHHHHHHHHHcCC
Q 025834 31 RDFILLDVRNGYEWDIGHFHGARRPDVDCFRSTSFGLSQREAFASDPLADLDKEKTDILMYCTGGIRCDVYSTILRQRGF 110 (247)
Q Consensus 31 ~~~vvIDvRn~~E~~~GhipGAi~i~~~~~~~~~~~~~~~~~~~~~~l~~l~k~~~~Iv~YCtgG~R~e~aa~~L~~~Gf 110 (247)
++++|||||++.||..||||||+|+|...|.+. . ...+++++ +||+||.+|.|+..++..|+..||
T Consensus 12 ~~~~liDvR~~~e~~~ghIpgAi~ip~~~l~~~--------~-----~~~l~~~~-~ivvyc~~g~rs~~a~~~L~~~G~ 77 (106)
T 3hix_A 12 PAFTILDVRDRSTYNDGHIMGAMAMPIEDLVDR--------A-----SSSLEKSR-DIYVYGAGDEQTSQAVNLLRSAGF 77 (106)
T ss_dssp -CCEEEECSCHHHHHTCEETTCEECCGGGHHHH--------H-----HHHSCTTS-CEEEECSSHHHHHHHHHHHHHTTC
T ss_pred CCeEEEECCCHHHHhcCcCCCCEeCCHHHHHHH--------H-----HhcCCCCC-eEEEEECCCChHHHHHHHHHHcCC
Confidence 579999999999999999999999999876421 1 11245554 799999999999999999999999
Q ss_pred CcEEEccchHHHHHHCcCCce
Q 025834 111 HNLYTLKGGVSHYLENEGPVE 131 (247)
Q Consensus 111 ~nV~~L~GGi~~w~~~g~~~~ 131 (247)
++|++|+||+.+|.++++|+.
T Consensus 78 ~~v~~l~GG~~~W~~~g~~~~ 98 (106)
T 3hix_A 78 EHVSELKGGLAAWKAIGGPTE 98 (106)
T ss_dssp SCEEECTTHHHHHHHTTCCEE
T ss_pred cCEEEecCCHHHHHHCCCCCC
Confidence 999999999999999999864
No 11
>1qxn_A SUD, sulfide dehydrogenase; polysulfide-sulfur transferase, homodimer; NMR {Wolinella succinogenes} SCOP: c.46.1.3
Probab=99.85 E-value=1.5e-21 Score=155.65 Aligned_cols=103 Identities=26% Similarity=0.471 Sum_probs=84.0
Q ss_pred CCCCHHHHHHHhhcCCchhhhhcccCCCCeEEEEcCCchhhhc-cc--CCCcccCCccccccccCCcchhhhhccCCccC
Q 025834 4 IPLAPSEWRNKLEAGKDIDKASNSDLNRDFILLDVRNGYEWDI-GH--FHGARRPDVDCFRSTSFGLSQREAFASDPLAD 80 (247)
Q Consensus 4 ~~Lsp~e~~~~l~~~~~~~l~~~~~~~~~~vvIDvRn~~E~~~-Gh--ipGAi~i~~~~~~~~~~~~~~~~~~~~~~l~~ 80 (247)
..|+++++.++++. .++++|||||++.||.. || ||||+|+|...+.+. .. +..
T Consensus 23 ~~is~~el~~~l~~------------~~~~~liDVR~~~E~~~~gh~~IpgAinip~~~l~~~------~~------~~~ 78 (137)
T 1qxn_A 23 VMLSPKDAYKLLQE------------NPDITLIDVRDPDELKAMGKPDVKNYKHMSRGKLEPL------LA------KSG 78 (137)
T ss_dssp EEECHHHHHHHHHH------------CTTSEEEECCCHHHHHHTCEECCSSEEECCTTTSHHH------HH------HHC
T ss_pred cccCHHHHHHHHhc------------CCCeEEEECCCHHHHHhcCCcCCCCCEEcchHHhhhH------Hh------hcc
Confidence 34566666666652 26789999999999999 99 999999998866420 01 223
Q ss_pred CCCCCceEEEEeCCCchHHHHHHHHHHcCCCcEEEccchHHHHHHCcCCce
Q 025834 81 LDKEKTDILMYCTGGIRCDVYSTILRQRGFHNLYTLKGGVSHYLENEGPVE 131 (247)
Q Consensus 81 l~k~~~~Iv~YCtgG~R~e~aa~~L~~~Gf~nV~~L~GGi~~w~~~g~~~~ 131 (247)
+++++ +||+||.+|.|+..++..|++.||++|+.|+||+.+|.++++|+.
T Consensus 79 l~~~~-~ivvyC~~G~rS~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~ 128 (137)
T 1qxn_A 79 LDPEK-PVVVFCKTAARAALAGKTLREYGFKTIYNSEGGMDKWLEEGLPSL 128 (137)
T ss_dssp CCTTS-CEEEECCSSSCHHHHHHHHHHHTCSCEEEESSCHHHHHHTTCCEE
T ss_pred CCCCC-eEEEEcCCCcHHHHHHHHHHHcCCcceEEEcCcHHHHHHCCCCcc
Confidence 55654 799999999999999999999999999999999999999999854
No 12
>1wv9_A Rhodanese homolog TT1651; CDC25, phosphatase, sulfurtransferase, structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=99.84 E-value=1.2e-21 Score=145.94 Aligned_cols=92 Identities=20% Similarity=0.348 Sum_probs=73.7
Q ss_pred CCCHHHHHHHhhcCCchhhhhcccCCCCeEEEEcCCchhhhcccCCCcccCCccccccccCCcchhhhhccCCccCCCCC
Q 025834 5 PLAPSEWRNKLEAGKDIDKASNSDLNRDFILLDVRNGYEWDIGHFHGARRPDVDCFRSTSFGLSQREAFASDPLADLDKE 84 (247)
Q Consensus 5 ~Lsp~e~~~~l~~~~~~~l~~~~~~~~~~vvIDvRn~~E~~~GhipGAi~i~~~~~~~~~~~~~~~~~~~~~~l~~l~k~ 84 (247)
.|+|+++.++++ ++++|||||++.||+.||||||+|+|...+.+ .+..+++
T Consensus 3 ~is~~~l~~~~~--------------~~~~liDvR~~~e~~~ghi~gAi~ip~~~l~~--------------~~~~l~~- 53 (94)
T 1wv9_A 3 KVRPEELPALLE--------------EGVLVVDVRPADRRSTPLPFAAEWVPLEKIQK--------------GEHGLPR- 53 (94)
T ss_dssp EECGGGHHHHHH--------------TTCEEEECCCC--CCSCCSSCCEECCHHHHTT--------------TCCCCCS-
T ss_pred cCCHHHHHHHHH--------------CCCEEEECCCHHHHhcccCCCCEECCHHHHHH--------------HHHhCCC-
Confidence 577888887776 25799999999999999999999999876642 1233556
Q ss_pred CceEEEEeCCCchHHHHHHHHHHcCCCcEEEccchHHHHHHCc
Q 025834 85 KTDILMYCTGGIRCDVYSTILRQRGFHNLYTLKGGVSHYLENE 127 (247)
Q Consensus 85 ~~~Iv~YCtgG~R~e~aa~~L~~~Gf~nV~~L~GGi~~w~~~g 127 (247)
+ +||+||.+|.|+..++..|++.||+ |+.|+||+.+|.++|
T Consensus 54 ~-~ivvyC~~g~rs~~a~~~L~~~G~~-v~~l~GG~~~W~~~G 94 (94)
T 1wv9_A 54 R-PLLLVCEKGLLSQVAALYLEAEGYE-AMSLEGGLQALTQGK 94 (94)
T ss_dssp S-CEEEECSSSHHHHHHHHHHHHHTCC-EEEETTGGGCC----
T ss_pred C-CEEEEcCCCChHHHHHHHHHHcCCc-EEEEcccHHHHHhCc
Confidence 4 7999999999999999999999999 999999999998754
No 13
>1tq1_A AT5G66040, senescence-associated family protein; CESG, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: c.46.1.3
Probab=99.84 E-value=2.1e-21 Score=153.01 Aligned_cols=110 Identities=21% Similarity=0.255 Sum_probs=83.6
Q ss_pred CCCCHHHHHHHhhcCCchhhhhcccCCCCeEEEEcCCchhhhcccCCCcccCCccccccccCCcchhhhhccCCccCCCC
Q 025834 4 IPLAPSEWRNKLEAGKDIDKASNSDLNRDFILLDVRNGYEWDIGHFHGARRPDVDCFRSTSFGLSQREAFASDPLADLDK 83 (247)
Q Consensus 4 ~~Lsp~e~~~~l~~~~~~~l~~~~~~~~~~vvIDvRn~~E~~~GhipGAi~i~~~~~~~~~~~~~~~~~~~~~~l~~l~k 83 (247)
..|+++++.++++ ++++|||||++.||..||||||+|+|...+..... ....++.. ..+..+++
T Consensus 18 ~~is~~e~~~~l~--------------~~~~lIDvR~~~e~~~ghIpgAinip~~~~~~~~~-~~~~~~~~-~~~~~l~~ 81 (129)
T 1tq1_A 18 SSVSVTVAHDLLL--------------AGHRYLDVRTPEEFSQGHACGAINVPYMNRGASGM-SKNTDFLE-QVSSHFGQ 81 (129)
T ss_dssp EEEEHHHHHHHHH--------------HTCCEEEESCHHHHHHCCBTTBEECCSCCCSTTTC-CCTTTHHH-HHTTTCCT
T ss_pred cccCHHHHHHHhc--------------CCCEEEECCCHHHHhcCCCCCcEECcHhhcccccc-cCCHHHHH-HHHhhCCC
Confidence 4577788877775 35789999999999999999999999865432111 00001100 11223556
Q ss_pred CCceEEEEeCCCchHHHHHHHHHHcCCCcEEEccchHHHHHHCcCCc
Q 025834 84 EKTDILMYCTGGIRCDVYSTILRQRGFHNLYTLKGGVSHYLENEGPV 130 (247)
Q Consensus 84 ~~~~Iv~YCtgG~R~e~aa~~L~~~Gf~nV~~L~GGi~~w~~~g~~~ 130 (247)
++ +||+||.+|.|+..++..|++.||++|+.|+||+.+|.++++|+
T Consensus 82 ~~-~ivvyC~~G~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~ 127 (129)
T 1tq1_A 82 SD-NIIVGCQSGGRSIKATTDLLHAGFTGVKDIVGGYSAWAKNGLPT 127 (129)
T ss_dssp TS-SEEEEESSCSHHHHHHHHHHHHHCCSEEEEECCHHHHHHHTCCC
T ss_pred CC-eEEEECCCCcHHHHHHHHHHHcCCCCeEEeCCcHHHHHhCCCCC
Confidence 54 79999999999999999999999999999999999999988875
No 14
>3nhv_A BH2092 protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 2.50A {Bacillus halodurans} PDB: 3o3w_A
Probab=99.84 E-value=1e-20 Score=152.07 Aligned_cols=86 Identities=28% Similarity=0.405 Sum_probs=74.6
Q ss_pred CCeEEEEcCCchhhhcccCCCcccCCccccccccCCcchhhhhccCCccCCCCCCceEEEEeCCC--chHHHHHHHHHHc
Q 025834 31 RDFILLDVRNGYEWDIGHFHGARRPDVDCFRSTSFGLSQREAFASDPLADLDKEKTDILMYCTGG--IRCDVYSTILRQR 108 (247)
Q Consensus 31 ~~~vvIDvRn~~E~~~GhipGAi~i~~~~~~~~~~~~~~~~~~~~~~l~~l~k~~~~Iv~YCtgG--~R~e~aa~~L~~~ 108 (247)
++++|||||++.||..||||||+|+|...+.. ..+..+++++ +||+||.+| .|+..+++.|+..
T Consensus 32 ~~~~liDvR~~~ey~~ghIpgAinip~~~l~~-------------~~~~~l~~~~-~ivvyC~~g~~~rs~~aa~~L~~~ 97 (144)
T 3nhv_A 32 EGIIVVDVRDAEAYKECHIPTAISIPGNKINE-------------DTTKRLSKEK-VIITYCWGPACNGATKAAAKFAQL 97 (144)
T ss_dssp CSEEEEECSCHHHHHHCBCTTCEECCGGGCST-------------TTTTTCCTTS-EEEEECSCTTCCHHHHHHHHHHHT
T ss_pred CCEEEEECcCHHHHhcCCCCCCEECCHHHHhH-------------HHHhhCCCCC-eEEEEECCCCccHHHHHHHHHHHC
Confidence 47999999999999999999999999987642 1233456664 799999998 7999999999999
Q ss_pred CCCcEEEccchHHHHHHCcCCce
Q 025834 109 GFHNLYTLKGGVSHYLENEGPVE 131 (247)
Q Consensus 109 Gf~nV~~L~GGi~~w~~~g~~~~ 131 (247)
|| +|+.|+||+.+|.++++|+.
T Consensus 98 G~-~v~~l~GG~~~W~~~g~pv~ 119 (144)
T 3nhv_A 98 GF-RVKELIGGIEYWRKENGEVE 119 (144)
T ss_dssp TC-EEEEEESHHHHHHHTTCCCB
T ss_pred CC-eEEEeCCcHHHHHHCCCCcc
Confidence 99 69999999999999999865
No 15
>3flh_A Uncharacterized protein LP_1913; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} PDB: 3fnj_A 3i3u_A
Probab=99.83 E-value=6.9e-21 Score=149.02 Aligned_cols=100 Identities=20% Similarity=0.295 Sum_probs=82.3
Q ss_pred CCCHHHHHHHhhcCCchhhhhcccCCCCeEEEEcCCchhh-hcccCCCcccCCccccccccCCcchhhhhccCCccCCCC
Q 025834 5 PLAPSEWRNKLEAGKDIDKASNSDLNRDFILLDVRNGYEW-DIGHFHGARRPDVDCFRSTSFGLSQREAFASDPLADLDK 83 (247)
Q Consensus 5 ~Lsp~e~~~~l~~~~~~~l~~~~~~~~~~vvIDvRn~~E~-~~GhipGAi~i~~~~~~~~~~~~~~~~~~~~~~l~~l~k 83 (247)
.|+++++.+++.+. .++++|||||++.|| ..||||||+|+|...|.+. +..+++
T Consensus 16 ~is~~el~~~l~~~-----------~~~~~liDvR~~~e~~~~ghIpgA~nip~~~l~~~--------------~~~l~~ 70 (124)
T 3flh_A 16 YIDHHTVLADMQNA-----------TGKYVVLDVRNAPAQVKKDQIKGAIAMPAKDLATR--------------IGELDP 70 (124)
T ss_dssp EECHHHHHHHHHHT-----------CCCEEEEECCCSCHHHHCCEETTCEECCHHHHHHH--------------GGGSCT
T ss_pred eecHHHHHHHHHcC-----------CCCEEEEECCCHHHHHhcCcCCCCEECCHHHHHHH--------------HhcCCC
Confidence 46777777776641 135999999999998 9999999999999876421 223556
Q ss_pred CCceEEEEeCCCch--HHHHHHHHHHcCCCcEEEccchHHHHHHCcCCce
Q 025834 84 EKTDILMYCTGGIR--CDVYSTILRQRGFHNLYTLKGGVSHYLENEGPVE 131 (247)
Q Consensus 84 ~~~~Iv~YCtgG~R--~e~aa~~L~~~Gf~nV~~L~GGi~~w~~~g~~~~ 131 (247)
++ +||+||.+|.| +..++..|++.||+ |+.|+||+.+|.+++.|..
T Consensus 71 ~~-~ivvyC~~g~r~~s~~a~~~L~~~G~~-v~~l~GG~~~W~~~~~p~~ 118 (124)
T 3flh_A 71 AK-TYVVYDWTGGTTLGKTALLVLLSAGFE-AYELAGALEGWKGMQLPLE 118 (124)
T ss_dssp TS-EEEEECSSSSCSHHHHHHHHHHHHTCE-EEEETTHHHHHHHTTCCEE
T ss_pred CC-eEEEEeCCCCchHHHHHHHHHHHcCCe-EEEeCCcHHHHHHcCCCCC
Confidence 54 79999999999 89999999999996 9999999999999998854
No 16
>3i2v_A Adenylyltransferase and sulfurtransferase MOCS3; rhodanese, UBA4, structural genomics, ubiquitin biology, structural genomics consortium, SGC; 1.25A {Homo sapiens}
Probab=99.81 E-value=2e-20 Score=145.63 Aligned_cols=111 Identities=15% Similarity=0.191 Sum_probs=82.5
Q ss_pred CCCHHHHHHHhhcCCchhhhhcccCCCCeEEEEcCCchhhhcccCCCcccCCccccccccCCcc---hhhhhc-cCCccC
Q 025834 5 PLAPSEWRNKLEAGKDIDKASNSDLNRDFILLDVRNGYEWDIGHFHGARRPDVDCFRSTSFGLS---QREAFA-SDPLAD 80 (247)
Q Consensus 5 ~Lsp~e~~~~l~~~~~~~l~~~~~~~~~~vvIDvRn~~E~~~GhipGAi~i~~~~~~~~~~~~~---~~~~~~-~~~l~~ 80 (247)
.|+++++.+++++ +++++|||||++.||+.||||||+|+|+..+.+...... ...+.. ... ..
T Consensus 2 ~is~~el~~~l~~------------~~~~~liDvR~~~e~~~ghIpgA~~ip~~~~~~~~~~~~~~~~~~l~~~~~~-~~ 68 (127)
T 3i2v_A 2 RVSVTDYKRLLDS------------GAFHLLLDVRPQVEVDICRLPHALHIPLKHLERRDAESLKLLKEAIWEEKQG-TQ 68 (127)
T ss_dssp EECHHHHHHHHHH------------TCCCEEEECSCHHHHHHCCCTTSEECCHHHHHTTCHHHHHHHHHHHHHHHTT-C-
T ss_pred CCCHHHHHHHHhC------------CCCeEEEECCCHHHhhheecCCceeCChHHHhhhhhhhHHHHHHHHhhhccc-cc
Confidence 5789999998875 246899999999999999999999999987653210000 000000 010 11
Q ss_pred CCCCCceEEEEeCCCchHHHHHHHHHHc------CCCcEEEccchHHHHHHCcCC
Q 025834 81 LDKEKTDILMYCTGGIRCDVYSTILRQR------GFHNLYTLKGGVSHYLENEGP 129 (247)
Q Consensus 81 l~k~~~~Iv~YCtgG~R~e~aa~~L~~~------Gf~nV~~L~GGi~~w~~~g~~ 129 (247)
++++ ++||+||.+|.|+..++.+|++. ||.+|+.|+||+.+|.++..|
T Consensus 69 ~~~~-~~ivv~C~~G~rs~~a~~~L~~~gg~~~~G~~~v~~l~GG~~~W~~~~~~ 122 (127)
T 3i2v_A 69 EGAA-VPIYVICKLGNDSQKAVKILQSLSAAQELDPLTVRDVVGGLMAWAAKIDG 122 (127)
T ss_dssp --CC-EEEEEECSSSSHHHHHHHHHHHHHHTTSSSCEEEEEETTHHHHHHHHTCT
T ss_pred CCCC-CeEEEEcCCCCcHHHHHHHHHHhhccccCCCceEEEecCCHHHHHHhcCC
Confidence 2233 37999999999999999999998 689999999999999987655
No 17
>2fsx_A RV0390, COG0607: rhodanese-related sulfurtransferase; RV0390 BR SAD DATA with FBAR, structural genomics, PSI; 1.80A {Mycobacterium tuberculosis}
Probab=99.79 E-value=9.2e-20 Score=146.64 Aligned_cols=112 Identities=21% Similarity=0.245 Sum_probs=78.0
Q ss_pred CCCCHHHHHHHhhcCCchhhhhcccCCCCeEEEEcCCchhhhc-ccC------CCcccCCccccccccCCcchhhhhccC
Q 025834 4 IPLAPSEWRNKLEAGKDIDKASNSDLNRDFILLDVRNGYEWDI-GHF------HGARRPDVDCFRSTSFGLSQREAFASD 76 (247)
Q Consensus 4 ~~Lsp~e~~~~l~~~~~~~l~~~~~~~~~~vvIDvRn~~E~~~-Ghi------pGAi~i~~~~~~~~~~~~~~~~~~~~~ 76 (247)
..|+++++.+++.+ +++++|||||++.||.. ||| |||+|+|+..+..........++....
T Consensus 5 ~~is~~el~~~l~~------------~~~~~liDVR~~~e~~~~ghi~~~g~~pgAv~ip~~~~~~~~~~~~~~~l~~~l 72 (148)
T 2fsx_A 5 GDITPLQAWEMLSD------------NPRAVLVDVRCEAEWRFVGVPDLSSLGREVVYVEWATSDGTHNDNFLAELRDRI 72 (148)
T ss_dssp EEECHHHHHHHHHH------------CTTCEEEECSCHHHHHHTCEECCGGGTCCCEECCSBCTTSCBCTTHHHHHHHHC
T ss_pred ccCCHHHHHHHHhc------------CCCeEEEECCCHHHHHhcCCCccccCCCCcEEeeeeccccccCHHHHHHHHHHH
Confidence 36899999998874 25789999999999997 999 999999987621100000011111100
Q ss_pred CccCCCCCCceEEEEeCCCchHHHHHHHHHHcCCCcEEEccchHHHHHHCcC
Q 025834 77 PLADLDKEKTDILMYCTGGIRCDVYSTILRQRGFHNLYTLKGGVSHYLENEG 128 (247)
Q Consensus 77 ~l~~l~k~~~~Iv~YCtgG~R~e~aa~~L~~~Gf~nV~~L~GGi~~w~~~g~ 128 (247)
...++++++ +||+||.+|.||..++..|++.||++|+.|+||+.+|.++++
T Consensus 73 ~~~~~~~~~-~ivvyC~~G~rS~~aa~~L~~~G~~~v~~l~GG~~~w~~~~g 123 (148)
T 2fsx_A 73 PADADQHER-PVIFLCRSGNRSIGAAEVATEAGITPAYNVLDGFEGHLDAEG 123 (148)
T ss_dssp C-------C-CEEEECSSSSTHHHHHHHHHHTTCCSEEEETTTTTCCCCTTS
T ss_pred hhccCCCCC-EEEEEcCCChhHHHHHHHHHHcCCcceEEEcCChhhhhhhcc
Confidence 011245554 799999999999999999999999999999999965544443
No 18
>2k0z_A Uncharacterized protein HP1203; A/B domain, structural genomics, unknown function, PSI-2, PR structure initiative; NMR {Helicobacter pylori}
Probab=99.79 E-value=7.5e-21 Score=145.83 Aligned_cols=87 Identities=25% Similarity=0.325 Sum_probs=74.0
Q ss_pred CCeEEEEcCCchhhhcccCCCcccCCccccccccCCcchhhhhccCCccCCCCCCceEEEEeCCCchHHHHHHHHHHcCC
Q 025834 31 RDFILLDVRNGYEWDIGHFHGARRPDVDCFRSTSFGLSQREAFASDPLADLDKEKTDILMYCTGGIRCDVYSTILRQRGF 110 (247)
Q Consensus 31 ~~~vvIDvRn~~E~~~GhipGAi~i~~~~~~~~~~~~~~~~~~~~~~l~~l~k~~~~Iv~YCtgG~R~e~aa~~L~~~Gf 110 (247)
++++|||||++.||..||||||+|+|...+.+. +.. ..+++++ +||+||.+|.|+..+++.|++.||
T Consensus 15 ~~~~liDvR~~~e~~~ghIpgAi~ip~~~l~~~--------~~~----~~~~~~~-~ivvyC~~G~rs~~aa~~L~~~G~ 81 (110)
T 2k0z_A 15 NDFIVVDVRELDEYEELHLPNATLISVNDQEKL--------ADF----LSQHKDK-KVLLHCRAGRRALDAAKSMHELGY 81 (110)
T ss_dssp GGSEEEEEECHHHHHHSBCTTEEEEETTCHHHH--------HHH----HHSCSSS-CEEEECSSSHHHHHHHHHHHHTTC
T ss_pred CCeEEEECCCHHHHhcCcCCCCEEcCHHHHHHH--------HHh----cccCCCC-EEEEEeCCCchHHHHHHHHHHCCC
Confidence 578999999999999999999999998876421 100 1245554 799999999999999999999999
Q ss_pred CcEEEccchHHHHHHCcCCce
Q 025834 111 HNLYTLKGGVSHYLENEGPVE 131 (247)
Q Consensus 111 ~nV~~L~GGi~~w~~~g~~~~ 131 (247)
++ +.|+||+.+|.++++|+.
T Consensus 82 ~~-~~l~GG~~~W~~~g~p~~ 101 (110)
T 2k0z_A 82 TP-YYLEGNVYDFEKYGFRMV 101 (110)
T ss_dssp CC-EEEESCGGGTTTTTCCCB
T ss_pred CE-EEecCCHHHHHHCCCcEe
Confidence 99 999999999999998864
No 19
>1t3k_A Arath CDC25, dual-specificity tyrosine phosphatase; cell cycle, phosphorylation, plant, hydrolase; NMR {Arabidopsis thaliana} SCOP: c.46.1.1
Probab=99.77 E-value=6.7e-20 Score=148.56 Aligned_cols=101 Identities=15% Similarity=0.237 Sum_probs=77.1
Q ss_pred CchhhhhcccCCCCeEEEEcCCchhhhcccCCCcccCCccccccccCCcchhhhhccCCccCCCCCCceEEEEeC-CCch
Q 025834 19 KDIDKASNSDLNRDFILLDVRNGYEWDIGHFHGARRPDVDCFRSTSFGLSQREAFASDPLADLDKEKTDILMYCT-GGIR 97 (247)
Q Consensus 19 ~~~~l~~~~~~~~~~vvIDvRn~~E~~~GhipGAi~i~~~~~~~~~~~~~~~~~~~~~~l~~l~k~~~~Iv~YCt-gG~R 97 (247)
+++++.+.+. .++++|||||++.||+.||||||+|+|...|.+. ..++. ..++++ ++||+||. +|.|
T Consensus 31 s~~el~~~l~-~~~~~lIDvR~~~ey~~ghIpgAinip~~~l~~~-----~~~l~-----~~~~~~-~~iVvyC~~~G~r 98 (152)
T 1t3k_A 31 TSTQLLPLHR-RPNIAIIDVRDEERNYDGHIAGSLHYASGSFDDK-----ISHLV-----QNVKDK-DTLVFHSALSQVR 98 (152)
T ss_dssp CTTTTTTCCC-CTTEEEEEESCSHHHHSSCCCSSEEECCSSSSTT-----HHHHH-----HTCCSC-CEEEESSSCCSSS
T ss_pred CHHHHHHHhc-CCCEEEEECCChhhccCccCCCCEECCHHHHHHH-----HHHHH-----HhcCCC-CEEEEEcCCCCcc
Confidence 3444444432 3679999999999999999999999999876421 11211 123454 47999999 9999
Q ss_pred HHHHHHHHHH--------cCCCcEEEccchHHHHHHCcCCce
Q 025834 98 CDVYSTILRQ--------RGFHNLYTLKGGVSHYLENEGPVE 131 (247)
Q Consensus 98 ~e~aa~~L~~--------~Gf~nV~~L~GGi~~w~~~g~~~~ 131 (247)
+..++..|.+ .||++|+.|+||+.+|.++++|+.
T Consensus 99 s~~aa~~L~~~l~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~ 140 (152)
T 1t3k_A 99 GPTCARRLVNYLDEKKEDTGIKNIMILERGFNGWEASGKPVC 140 (152)
T ss_dssp HHHHHHHHHHHHHHSSSCCCSSEEEEESSTTHHHHHHSCSSC
T ss_pred hHHHHHHHHHHHHHHHHhcCCCcEEEEcCCHHHHHHcCCccc
Confidence 9988887753 799999999999999999888753
No 20
>3g5j_A Putative ATP/GTP binding protein; N-terminal domain of ATP/GTP binding protein, PSI, MCSG, STR genomics, protein structure initiative; HET: PGE; 1.76A {Clostridium difficile}
Probab=99.77 E-value=1.3e-19 Score=141.88 Aligned_cols=94 Identities=24% Similarity=0.410 Sum_probs=70.0
Q ss_pred CCeEEEEcCCchhhhcccCCCcccCCccccccccC---------------------CcchhhhhccCCccCCCCCCceEE
Q 025834 31 RDFILLDVRNGYEWDIGHFHGARRPDVDCFRSTSF---------------------GLSQREAFASDPLADLDKEKTDIL 89 (247)
Q Consensus 31 ~~~vvIDvRn~~E~~~GhipGAi~i~~~~~~~~~~---------------------~~~~~~~~~~~~l~~l~k~~~~Iv 89 (247)
++++|||||++.||..||||||+|+|...+.+... .....++. ..+..++++.++||
T Consensus 16 ~~~~iiDvR~~~e~~~ghIpgA~nip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~iv 93 (134)
T 3g5j_A 16 DKVIFVDVRTEGEYEEDHILNAINMPLFKNNEHNEVGTIYKMQGKHEAIQKGFDYVSYKLKDIY--LQAAELALNYDNIV 93 (134)
T ss_dssp TTEEEEECSCHHHHHHCCCTTCEECCSSCHHHHHHHHHHHHHHCHHHHHHHHHHHHGGGHHHHH--HHHHHHHTTCSEEE
T ss_pred CCcEEEEcCCHHHHhcCCCCCCEEcCccchhhhhcccceeeecChhHHHhcccccccccHHHHH--HHHHHhccCCCeEE
Confidence 78999999999999999999999999965421000 00000110 11222445524899
Q ss_pred EEe-CCCchHHHHHHHHHHcCCCcEEEccchHHHHHHCc
Q 025834 90 MYC-TGGIRCDVYSTILRQRGFHNLYTLKGGVSHYLENE 127 (247)
Q Consensus 90 ~YC-tgG~R~e~aa~~L~~~Gf~nV~~L~GGi~~w~~~g 127 (247)
+|| ++|.||..+++.|+..|| +|+.|+||+.+|.+..
T Consensus 94 vyC~~~G~rs~~a~~~L~~~G~-~v~~l~GG~~~W~~~~ 131 (134)
T 3g5j_A 94 IYCARGGMRSGSIVNLLSSLGV-NVYQLEGGYKAYRNFV 131 (134)
T ss_dssp EECSSSSHHHHHHHHHHHHTTC-CCEEETTHHHHHHHHH
T ss_pred EEECCCChHHHHHHHHHHHcCC-ceEEEeCcHHHHHHHh
Confidence 999 699999999999999999 9999999999998743
No 21
>1c25_A CDC25A; hydrolase, cell cycle phosphatase,dual specificity protein phosphatase, CDK2; 2.30A {Homo sapiens} SCOP: c.46.1.1
Probab=99.76 E-value=1.1e-18 Score=141.82 Aligned_cols=109 Identities=20% Similarity=0.361 Sum_probs=81.4
Q ss_pred CCCCHHHHHHHhhcCCchhhhhcccCCCCeEEEEcCCchhhhcccCCCcccCCccccccccCCcchhhhhccCCccCC-C
Q 025834 4 IPLAPSEWRNKLEAGKDIDKASNSDLNRDFILLDVRNGYEWDIGHFHGARRPDVDCFRSTSFGLSQREAFASDPLADL-D 82 (247)
Q Consensus 4 ~~Lsp~e~~~~l~~~~~~~l~~~~~~~~~~vvIDvRn~~E~~~GhipGAi~i~~~~~~~~~~~~~~~~~~~~~~l~~l-~ 82 (247)
..|+++++.+++++... ...++++|||||++.||..||||||+|+|...+.+. +.. ....+ +
T Consensus 23 ~~is~~el~~~l~~~~~-------~~~~~~~liDvR~~~e~~~ghIpgAinip~~~~~~~--------~~~--~~~~~~~ 85 (161)
T 1c25_A 23 KYISPEIMASVLNGKFA-------NLIKEFVIIDCRYPYEYEGGHIKGAVNLHMEEEVED--------FLL--KKPIVPT 85 (161)
T ss_dssp CEECHHHHHHHHTTTTT-------TTEEEEEEEECSCHHHHHTCEETTCEECCSHHHHHH--------HTT--TSCCCCC
T ss_pred ceeCHHHHHHHHhcccc-------ccCCCeEEEECCChHHccCCcccCcEeCChhHHHHH--------HHh--hhhhccC
Confidence 45788888888764100 001468999999999999999999999999765321 100 01112 3
Q ss_pred CCCceE--EEEeC-CCchHHHHHHHHHHc----------CCCcEEEccchHHHHHHCcCCc
Q 025834 83 KEKTDI--LMYCT-GGIRCDVYSTILRQR----------GFHNLYTLKGGVSHYLENEGPV 130 (247)
Q Consensus 83 k~~~~I--v~YCt-gG~R~e~aa~~L~~~----------Gf~nV~~L~GGi~~w~~~g~~~ 130 (247)
++ ++| |+||. +|.|+..++.+|++. ||++|+.|+||+.+|.+++.+.
T Consensus 86 ~~-~~ivvv~yC~~sg~rs~~aa~~L~~~~~~~~~l~~~G~~~v~~l~GG~~~W~~~~~~~ 145 (161)
T 1c25_A 86 DG-KRVIVVFHCEFSSERGPRMCRYVRERDRLGNEYPKLHYPELYVLKGGYKEFFMKCQSY 145 (161)
T ss_dssp TT-SEEEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSSCCEEEETTHHHHHHHHHGGG
T ss_pred CC-CCeEEEEEcCCCCcchHHHHHHHHHHHHhhhhccccCCceEEEEcCCHHHHHHHcccc
Confidence 44 365 68999 999999999999864 9999999999999999988774
No 22
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X
Probab=99.75 E-value=1.7e-18 Score=151.47 Aligned_cols=111 Identities=20% Similarity=0.303 Sum_probs=85.2
Q ss_pred CCCCHHHHHHHhhcCCchhhhhcccCCCCeEEEEcCCchhhhcccCCCcccCCcccccccc----CCcc-hhhhhccCCc
Q 025834 4 IPLAPSEWRNKLEAGKDIDKASNSDLNRDFILLDVRNGYEWDIGHFHGARRPDVDCFRSTS----FGLS-QREAFASDPL 78 (247)
Q Consensus 4 ~~Lsp~e~~~~l~~~~~~~l~~~~~~~~~~vvIDvRn~~E~~~GhipGAi~i~~~~~~~~~----~~~~-~~~~~~~~~l 78 (247)
..|+|+++.+++++ ++++|||||++.||..||||||+|+|...+.... .... ...+. ..+
T Consensus 9 ~~is~~~l~~~l~~-------------~~~~iiDvR~~~ey~~ghIpgA~~ip~~~l~~~~~~~~~~~~~~~~~~--~~~ 73 (271)
T 1e0c_A 9 LVIEPADLQARLSA-------------PELILVDLTSAARYAEGHIPGARFVDPKRTQLGQPPAPGLQPPREQLE--SLF 73 (271)
T ss_dssp SEECHHHHHTTTTC-------------TTEEEEECSCHHHHHHCBSTTCEECCGGGGSCCCTTCTTSCCCHHHHH--HHH
T ss_pred ceeeHHHHHHhccC-------------CCeEEEEcCCcchhhhCcCCCCEECCHHHhccCCCCCCCCCCCHHHHH--HHH
Confidence 35788888877753 6789999999999999999999999998765321 0010 00110 001
Q ss_pred c--CCCCCCceEEEEeCCCc-hHHHHHHHHHHcCCCcEEEccchHHHHHHCcCCc
Q 025834 79 A--DLDKEKTDILMYCTGGI-RCDVYSTILRQRGFHNLYTLKGGVSHYLENEGPV 130 (247)
Q Consensus 79 ~--~l~k~~~~Iv~YCtgG~-R~e~aa~~L~~~Gf~nV~~L~GGi~~w~~~g~~~ 130 (247)
. ++++++ +||+||.+|. |+.++++.|+..||++|++|+||+.+|..+++|+
T Consensus 74 ~~~gi~~~~-~vvvyc~~g~~~s~~a~~~L~~~G~~~v~~L~GG~~~w~~~g~p~ 127 (271)
T 1e0c_A 74 GELGHRPEA-VYVVYDDEGGGWAGRFIWLLDVIGQQRYHYLNGGLTAWLAEDRPL 127 (271)
T ss_dssp HHHTCCTTC-EEEEECSSSSHHHHHHHHHHHHTTCCCEEEETTHHHHHHHTTCCC
T ss_pred HHcCCCCCC-eEEEEcCCCCccHHHHHHHHHHcCCCCeEEecCCHHHHHHcCCCc
Confidence 1 245554 7999999888 9999999999999999999999999999988764
No 23
>3op3_A M-phase inducer phosphatase 3; structural genomics, structural genomics consortium, SGC, Al alpha sandwich, kinase, cytosol, hydrolase; 2.63A {Homo sapiens}
Probab=99.75 E-value=1.4e-18 Score=148.95 Aligned_cols=116 Identities=24% Similarity=0.306 Sum_probs=80.0
Q ss_pred CCCCHHHHHHHhhcCCchhhhhcccCCCCeEEEEcCCchhhhcccCCCcccCCccc-cccccCCcchhhhhccCCccCCC
Q 025834 4 IPLAPSEWRNKLEAGKDIDKASNSDLNRDFILLDVRNGYEWDIGHFHGARRPDVDC-FRSTSFGLSQREAFASDPLADLD 82 (247)
Q Consensus 4 ~~Lsp~e~~~~l~~~~~~~l~~~~~~~~~~vvIDvRn~~E~~~GhipGAi~i~~~~-~~~~~~~~~~~~~~~~~~l~~l~ 82 (247)
+.|+|+++.++++..... ..++++|||||+++||+.||||||+|+|... +.+ ..........+
T Consensus 57 ~~Is~~eL~~~l~~~~~~-------~~~~~~lIDVR~~~Ey~~GHIpGAinIP~~~~l~~---------~l~~~~~~~~~ 120 (216)
T 3op3_A 57 KYVNPETVAALLSGKFQG-------LIEKFYVIDCRYPYEYLGGHIQGALNLYSQEELFN---------FFLKKPIVPLD 120 (216)
T ss_dssp EEECHHHHHHHHTTTTTT-------TEEEEEEEECSCHHHHHTSEETTCEECCSHHHHHH---------HHTSSCCCCSS
T ss_pred CEeCHHHHHHHHhCCCcc-------ccCCEEEEEeCcHHHHhcCCccCCEECChHHHHHH---------HHhhccccccc
Confidence 457788888887641000 0036899999999999999999999999864 321 11000111122
Q ss_pred CCC-ceEEEEeC-CCchHHHHHHHHHHc----------CCCcEEEccchHHHHHHCcCCceeecce
Q 025834 83 KEK-TDILMYCT-GGIRCDVYSTILRQR----------GFHNLYTLKGGVSHYLENEGPVEWVGNL 136 (247)
Q Consensus 83 k~~-~~Iv~YCt-gG~R~e~aa~~L~~~----------Gf~nV~~L~GGi~~w~~~g~~~~~~G~~ 136 (247)
+++ .+||+||. +|.|+..++.+|++. ||++|++|+|||.+|.++... ...|..
T Consensus 121 ~~k~~~VVvyC~~SG~Rs~~aa~~L~~~~~~~~~y~~lGf~~V~~L~GG~~aW~~~~~~-lcep~~ 185 (216)
T 3op3_A 121 TQKRIIIVFHCEFSSERGPRMCRCLREEDRSLNQYPALYYPELYILKGGYRDFFPEYME-LCEPQS 185 (216)
T ss_dssp TTSEEEEEEECCC--CCHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTCGG-GEESSC
T ss_pred cCCCCEEEEEeCCCChHHHHHHHHHHHcCcccccccccCCCcEEEECCcHHHHHHhCcc-cccCCC
Confidence 222 24999999 999999999999876 899999999999999987654 344433
No 24
>2vsw_A Dual specificity protein phosphatase 16; hydrolase, dual specificity phosphatase, nucleus, cytoplasm, rhodanese domain, CAsp8; 2.20A {Homo sapiens} PDB: 3tg3_A
Probab=99.75 E-value=1.1e-18 Score=140.58 Aligned_cols=118 Identities=16% Similarity=0.244 Sum_probs=83.2
Q ss_pred CCCCCCCHHHHHHHhhcCCchhhhhcccCCCCeEEEEcCCchhhhcccCCCcccCCccccc-cc--cCCcchhhhhccCC
Q 025834 1 MRAIPLAPSEWRNKLEAGKDIDKASNSDLNRDFILLDVRNGYEWDIGHFHGARRPDVDCFR-ST--SFGLSQREAFASDP 77 (247)
Q Consensus 1 mra~~Lsp~e~~~~l~~~~~~~l~~~~~~~~~~vvIDvRn~~E~~~GhipGAi~i~~~~~~-~~--~~~~~~~~~~~~~~ 77 (247)
|-.+.|+++++.+++++. +++++|||||++.||..||||||+|+|+..+. .. .......++.....
T Consensus 1 ~~~~~Is~~~l~~~l~~~-----------~~~~~iiDvR~~~ey~~gHIpgAinip~~~l~~~~~~~~~~~~~~ll~~~~ 69 (153)
T 2vsw_A 1 MIGTQIVTERLVALLESG-----------TEKVLLIDSRPFVEYNTSHILEAININCSKLMKRRLQQDKVLITELIQHSA 69 (153)
T ss_dssp CCCEEECHHHHHHHHTST-----------TCCEEEEECSCHHHHHHCEETTCEECCCCHHHHHHHHTTSSCHHHHHHHSC
T ss_pred CCCccccHHHHHHHHhcC-----------CCCEEEEECCCHHHhccCccCCCeeeChHHHHHhhhhcCCcCHHHhcCchh
Confidence 345788999999988731 25789999999999999999999999998652 10 00011111110000
Q ss_pred c--cCCCCCCceEEEEeCCCchHHHH------HHHHH--HcCCCcEEEccchHHHHHHCcCCc
Q 025834 78 L--ADLDKEKTDILMYCTGGIRCDVY------STILR--QRGFHNLYTLKGGVSHYLENEGPV 130 (247)
Q Consensus 78 l--~~l~k~~~~Iv~YCtgG~R~e~a------a~~L~--~~Gf~nV~~L~GGi~~w~~~g~~~ 130 (247)
. ..++++ ++||+||.+|.|+..+ +..|+ +.||++|++|+||+.+|.+.+.+.
T Consensus 70 ~~~~~~~~~-~~iVvyc~~g~~s~~a~~~~~~~~~L~~l~~G~~~v~~L~GG~~~W~~~~~~~ 131 (153)
T 2vsw_A 70 KHKVDIDCS-QKVVVYDQSSQDVASLSSDCFLTVLLGKLEKSFNSVHLLAGGFAEFSRCFPGL 131 (153)
T ss_dssp SSCCCCCTT-SEEEEECSSCCCGGGSCTTSHHHHHHHHHHHHCSCEEEETTHHHHHHHHCGGG
T ss_pred hhhhccCCC-CeEEEEeCCCCcccccccchHHHHHHHHHHhCCCcEEEEeChHHHHHHhChhh
Confidence 1 123555 4799999999998766 46666 449999999999999998875543
No 25
>2a2k_A M-phase inducer phosphatase 2; dual specificity, substrate trapping, active site mutant, hydrolase; 1.52A {Homo sapiens} PDB: 2ifv_A 1ymd_A 1ym9_A 1ymk_A 1yml_A 1ys0_A 1cwt_A 2ifd_A
Probab=99.75 E-value=1.8e-18 Score=142.61 Aligned_cols=118 Identities=17% Similarity=0.284 Sum_probs=82.3
Q ss_pred CCCCHHHHHHHhhcCCchhhhhcccCCCCeEEEEcCCchhhhcccCCCcccCCccccccccCCcchhhhhccCCccCCCC
Q 025834 4 IPLAPSEWRNKLEAGKDIDKASNSDLNRDFILLDVRNGYEWDIGHFHGARRPDVDCFRSTSFGLSQREAFASDPLADLDK 83 (247)
Q Consensus 4 ~~Lsp~e~~~~l~~~~~~~l~~~~~~~~~~vvIDvRn~~E~~~GhipGAi~i~~~~~~~~~~~~~~~~~~~~~~l~~l~k 83 (247)
..|+++++.+++++.... ..++++|||||++.||+.||||||+|+|...+.+ .+.....+...++
T Consensus 24 ~~is~~el~~~l~~~~~~-------~~~~~~liDvR~~~ey~~ghIpgAinip~~~l~~--------~~~~~~~~~~~~~ 88 (175)
T 2a2k_A 24 KYISPETMVALLTGKFSN-------IVDKFVIVDCRYPYEYEGGHIKTAVNLPLERDAE--------SFLLKSPIAPCSL 88 (175)
T ss_dssp CEECHHHHHHHHTTTTTT-------TEEEEEEEECSCHHHHHTCEETTCEECCSHHHHH--------HHHHSSCCCC---
T ss_pred ceeCHHHHHHHHhccccc-------CCCCEEEEECCCHHHHcCCcCCCcEECChhHHHH--------HhhhhhhhccccC
Confidence 557888888887641000 0136899999999999999999999999876532 1111111111224
Q ss_pred CCceEEE--EeC-CCchHHHHHHHHHH----------cCCCcEEEccchHHHHHHCcCCceeecceeE
Q 025834 84 EKTDILM--YCT-GGIRCDVYSTILRQ----------RGFHNLYTLKGGVSHYLENEGPVEWVGNLFV 138 (247)
Q Consensus 84 ~~~~Iv~--YCt-gG~R~e~aa~~L~~----------~Gf~nV~~L~GGi~~w~~~g~~~~~~G~~fv 138 (247)
++ +||+ ||. +|.|+..++.+|++ .||++|++|+||+.+|.+++++. ..+..||
T Consensus 89 ~~-~ivvv~yC~~~g~rs~~aa~~L~~~~~~~~~l~~~G~~~V~~L~GG~~~W~~~~~~~-~~~~~y~ 154 (175)
T 2a2k_A 89 DK-RVILIFHSEFSSERGPRMCRFIRERDRAVNDYPSLYYPEMYILKGGYKEFFPQHPNF-CEPQDYR 154 (175)
T ss_dssp -C-EEEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTCGGG-EESSCCC
T ss_pred CC-CeEEEEECCCCCCccHHHHHHHHHhhhhhhhhhhcCCceEEEEcCCHHHHHHHCccc-cCCCCcc
Confidence 43 6644 699 89999999999986 49999999999999999988774 3444443
No 26
>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A
Probab=99.75 E-value=2.1e-19 Score=131.17 Aligned_cols=80 Identities=20% Similarity=0.312 Sum_probs=66.3
Q ss_pred CeEEEEcCCchhhhcccCCCcccCCccccccccCCcchhhhhccCCccCCCCCCceEEEEeCCCchHHHHHHHHHHcCCC
Q 025834 32 DFILLDVRNGYEWDIGHFHGARRPDVDCFRSTSFGLSQREAFASDPLADLDKEKTDILMYCTGGIRCDVYSTILRQRGFH 111 (247)
Q Consensus 32 ~~vvIDvRn~~E~~~GhipGAi~i~~~~~~~~~~~~~~~~~~~~~~l~~l~k~~~~Iv~YCtgG~R~e~aa~~L~~~Gf~ 111 (247)
+++|||||++.||+.||||||+|+|...|.+.. .+ + ..+++ ++||+||.+|.|+..++..|++.||+
T Consensus 1 ~~~liDvR~~~e~~~ghIpgA~~ip~~~l~~~~-----~~------l-~~~~~-~~ivv~C~~g~rs~~aa~~L~~~G~~ 67 (85)
T 2jtq_A 1 AEHWIDVRVPEQYQQEHVQGAINIPLKEVKERI-----AT------A-VPDKN-DTVKVYCNAGRQSGQAKEILSEMGYT 67 (85)
T ss_dssp CEEEEECSCHHHHTTEEETTCEECCHHHHHHHH-----HH------H-CCCTT-SEEEEEESSSHHHHHHHHHHHHTTCS
T ss_pred CCEEEECCCHHHHHhCCCCCCEEcCHHHHHHHH-----HH------h-CCCCC-CcEEEEcCCCchHHHHHHHHHHcCCC
Confidence 468999999999999999999999998764210 11 1 12454 47999999999999999999999999
Q ss_pred cEEEccchHHHHHH
Q 025834 112 NLYTLKGGVSHYLE 125 (247)
Q Consensus 112 nV~~L~GGi~~w~~ 125 (247)
+|+.| ||+.+|..
T Consensus 68 ~v~~l-GG~~~w~~ 80 (85)
T 2jtq_A 68 HVENA-GGLKDIAM 80 (85)
T ss_dssp SEEEE-EETTTCCS
T ss_pred CEEec-cCHHHHhc
Confidence 99999 99998853
No 27
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X
Probab=99.75 E-value=2.3e-18 Score=150.70 Aligned_cols=112 Identities=19% Similarity=0.225 Sum_probs=83.5
Q ss_pred CCHHHHHHHhhcCCchhhhhcccCCCCeEEEEcCCchhhh--------cccCCCcccCCcccccccc-CCcchhhhhccC
Q 025834 6 LAPSEWRNKLEAGKDIDKASNSDLNRDFILLDVRNGYEWD--------IGHFHGARRPDVDCFRSTS-FGLSQREAFASD 76 (247)
Q Consensus 6 Lsp~e~~~~l~~~~~~~l~~~~~~~~~~vvIDvRn~~E~~--------~GhipGAi~i~~~~~~~~~-~~~~~~~~~~~~ 76 (247)
++++++.+.+.+ ++++|||||++.||. .||||||+|+|+..+.+.. .....+++....
T Consensus 149 i~~~~l~~~l~~-------------~~~~liDvR~~~e~~g~~~~~~~~ghIpgA~~ip~~~~~~~~~~~~~~~~l~~~~ 215 (271)
T 1e0c_A 149 ASRDYLLGRLGA-------------ADLAIWDARSPQEYRGEKVLAAKGGHIPGAVNFEWTAAMDPSRALRIRTDIAGRL 215 (271)
T ss_dssp CCHHHHHHHTTC-------------TTEEEEECSCHHHHTTSSCCSSSCSBCTTCEECCGGGGEEGGGTTEECTTHHHHH
T ss_pred ccHHHHHHHhcC-------------CCcEEEEcCChhhcCCccCCCCcCCcCCCceeccHHHhCCCCCCCCCHHHHHHHH
Confidence 566666666553 579999999999999 9999999999998764321 000011111000
Q ss_pred CccCCCCCCceEEEEeCCCchHHHHHHHHHHcCCCcEEEccchHHHHHHC-cCCce
Q 025834 77 PLADLDKEKTDILMYCTGGIRCDVYSTILRQRGFHNLYTLKGGVSHYLEN-EGPVE 131 (247)
Q Consensus 77 ~l~~l~k~~~~Iv~YCtgG~R~e~aa~~L~~~Gf~nV~~L~GGi~~w~~~-g~~~~ 131 (247)
....+++++ +||+||.+|.|+..++..|+..||++|+.|+||+.+|.+. +.|+.
T Consensus 216 ~~~~~~~~~-~ivvyC~~G~rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~~~~pv~ 270 (271)
T 1e0c_A 216 EELGITPDK-EIVTHCQTHHRSGLTYLIAKALGYPRVKGYAGSWGEWGNHPDTPVE 270 (271)
T ss_dssp HHTTCCTTS-EEEEECSSSSHHHHHHHHHHHTTCSCEEECSSHHHHHTTCTTCCCB
T ss_pred HHcCCCCCC-CEEEECCchHHHHHHHHHHHHcCCCCceeeCCcHHHHhcCCCCCCc
Confidence 011356654 7999999999999999999999999999999999999987 77753
No 28
>1vee_A Proline-rich protein family; hypothetical protein, structural genomics, rhodanese domain, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} PDB: 2dcq_A
Probab=99.75 E-value=1e-18 Score=138.37 Aligned_cols=114 Identities=15% Similarity=0.158 Sum_probs=85.3
Q ss_pred CCCCCHHHHHHHhhcCCchhhhhcccCCCCeEEEEcCCchhhhc-ccC------CCcccCCccccccccCCcchhhhhcc
Q 025834 3 AIPLAPSEWRNKLEAGKDIDKASNSDLNRDFILLDVRNGYEWDI-GHF------HGARRPDVDCFRSTSFGLSQREAFAS 75 (247)
Q Consensus 3 a~~Lsp~e~~~~l~~~~~~~l~~~~~~~~~~vvIDvRn~~E~~~-Ghi------pGAi~i~~~~~~~~~~~~~~~~~~~~ 75 (247)
...|+|+++.+++.+ +++++|||||++.||+. ||+ |||+|+|+..+.+..+ ..++.
T Consensus 4 ~~~is~~e~~~~l~~------------~~~~~liDVR~~~E~~~~~~~~~~g~~~ga~~ip~~~~~~~~~---~~~l~-- 66 (134)
T 1vee_A 4 GSSGSAKNAYTKLGT------------DDNAQLLDIRATADFRQVGSPNIKGLGKKAVSTVYNGEDKPGF---LKKLS-- 66 (134)
T ss_dssp SCBCCHHHHHHHHHH------------CTTEEEEECSCHHHHHHTCEECCTTTSCCCEECCCCGGGHHHH---HHHHH--
T ss_pred CCccCHHHHHHHHHh------------CCCeEEEEcCCHHHHhhcCCCcccccCCceEEeecccccChhH---HHHHH--
Confidence 357899999998874 26789999999999985 444 7999999765411000 01111
Q ss_pred CCccCCCCCCceEEEEeCCCchHHHHHHHHHHcCCCcEEEccchH---HHHHHCcCCceeecc
Q 025834 76 DPLADLDKEKTDILMYCTGGIRCDVYSTILRQRGFHNLYTLKGGV---SHYLENEGPVEWVGN 135 (247)
Q Consensus 76 ~~l~~l~k~~~~Iv~YCtgG~R~e~aa~~L~~~Gf~nV~~L~GGi---~~w~~~g~~~~~~G~ 135 (247)
..+ .++++ ++||+||.+|.||..++..|+++||++|+.|.||| .+|.++++|+....+
T Consensus 67 ~~~-~~~~~-~~ivv~C~sG~RS~~aa~~L~~~G~~~v~~l~GG~~~~~~W~~~g~p~~~~~~ 127 (134)
T 1vee_A 67 LKF-KDPEN-TTLYILDKFDGNSELVAELVALNGFKSAYAIKDGAEGPRGWLNSSLPWIEPKK 127 (134)
T ss_dssp TTC-SCGGG-CEEEEECSSSTTHHHHHHHHHHHTCSEEEECTTTTTSTTSSGGGTCCEECCCC
T ss_pred HHh-CCCCC-CEEEEEeCCCCcHHHHHHHHHHcCCcceEEecCCccCCcchhhcCCCCCCCCC
Confidence 111 02454 48999999999999999999999999999999999 789999999765443
No 29
>2j6p_A SB(V)-AS(V) reductase; arsenate reductase, antimonate reductase, CDC25 phosphatase, rhodanese, C-MYC epitope, oxidoreductase; HET: EPE; 2.15A {Leishmania major}
Probab=99.74 E-value=1.8e-18 Score=140.00 Aligned_cols=110 Identities=16% Similarity=0.227 Sum_probs=80.1
Q ss_pred CCCCCHHHHHHHhhcCCchhhhhcccCCCCeEEEEcCCchhhhcccCCCcccCCccccccccCCcchhhhhccCCccCCC
Q 025834 3 AIPLAPSEWRNKLEAGKDIDKASNSDLNRDFILLDVRNGYEWDIGHFHGARRPDVDCFRSTSFGLSQREAFASDPLADLD 82 (247)
Q Consensus 3 a~~Lsp~e~~~~l~~~~~~~l~~~~~~~~~~vvIDvRn~~E~~~GhipGAi~i~~~~~~~~~~~~~~~~~~~~~~l~~l~ 82 (247)
...|+++++.+++++.. ..++++|||||++ ||..||||||+|+|...+.+.. ..++.. .+. +
T Consensus 4 ~~~Is~~el~~~l~~~~---------~~~~~~lIDvR~~-ey~~gHIpGAinip~~~l~~~~----~~~l~~--~l~--~ 65 (152)
T 2j6p_A 4 YTYIKPEELVELLDNPD---------SLVKAAVIDCRDS-DRDCGFIVNSINMPTISCTEEM----YEKLAK--TLF--E 65 (152)
T ss_dssp CEEECHHHHHHHHHSHH---------HHHTEEEEECCST-TGGGCBCTTCEECCTTTCCHHH----HHHHHH--HHH--H
T ss_pred cCccCHHHHHHHHhCCC---------CCCCEEEEEcCcH-HhCcCcCCCcEECChhHhhHHH----HHHHHH--Hhc--c
Confidence 36789999999887410 0037899999999 9999999999999998664200 011110 010 0
Q ss_pred CCCceEEEEe-CCCchHHHHH----HHHHHcCC--CcEEEccchHHHHHHCcCCc
Q 025834 83 KEKTDILMYC-TGGIRCDVYS----TILRQRGF--HNLYTLKGGVSHYLENEGPV 130 (247)
Q Consensus 83 k~~~~Iv~YC-tgG~R~e~aa----~~L~~~Gf--~nV~~L~GGi~~w~~~g~~~ 130 (247)
++++.||+|| .+|.|+..++ ..|++.|| .+|+.|+||+.+|.+++++.
T Consensus 66 ~~~~~vV~yC~~sg~rs~~aa~~~~~~L~~~G~~~~~v~~L~GG~~~W~~~g~~~ 120 (152)
T 2j6p_A 66 EKKELAVFHCAQSLVRAPKGANRFALAQKKLGYVLPAVYVLRGGWEAFYHMYGDV 120 (152)
T ss_dssp TTCCEEEEECSSSSSHHHHHHHHHHHHHHHHTCCCSEEEEETTHHHHHHHHHTTT
T ss_pred cCCCEEEEEcCCCCCccHHHHHHHHHHHHHcCCCCCCEEEEcCcHHHHHHHcCCC
Confidence 2233588889 6899998888 67788997 59999999999999988774
No 30
>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2
Probab=99.74 E-value=3e-18 Score=150.75 Aligned_cols=114 Identities=17% Similarity=0.256 Sum_probs=85.5
Q ss_pred CCCCHHHHHHHhhcCCchhhhhcccCCCCeEEEEcC----------CchhhhcccCCCcccCCcccccccc----CCcc-
Q 025834 4 IPLAPSEWRNKLEAGKDIDKASNSDLNRDFILLDVR----------NGYEWDIGHFHGARRPDVDCFRSTS----FGLS- 68 (247)
Q Consensus 4 ~~Lsp~e~~~~l~~~~~~~l~~~~~~~~~~vvIDvR----------n~~E~~~GhipGAi~i~~~~~~~~~----~~~~- 68 (247)
..|+++++.+++.+ ++++|||+| +..||..||||||+|+|+..+.+.. ....
T Consensus 4 ~~is~~~l~~~l~~-------------~~~~iiDvR~~~~~~~~~~~~~e~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~ 70 (280)
T 1urh_A 4 WFVGADWLAEHIDD-------------PEIQIIDARMASPGQEDRNVAQEYLNGHIPGAVFFDIEALSDHTSPLPHMLPR 70 (280)
T ss_dssp CEECHHHHHTTTTC-------------TTEEEEECCCCCSSCTTCCHHHHHHHSBCTTCEECCGGGGSCSSSSSSSCCCC
T ss_pred ceeeHHHHHHhcCC-------------CCeEEEEeeccCCcccccchhhhhhhCcCCCCEECCHHHhcCCCCCCCCCCCC
Confidence 45788888887764 689999999 6789999999999999998664321 1111
Q ss_pred hhhhhccCCccCCCCCCceEEEEeCCCch-HHHHHHHHHHcCCCcEEEccchHHHHHHCcCCce
Q 025834 69 QREAFASDPLADLDKEKTDILMYCTGGIR-CDVYSTILRQRGFHNLYTLKGGVSHYLENEGPVE 131 (247)
Q Consensus 69 ~~~~~~~~~l~~l~k~~~~Iv~YCtgG~R-~e~aa~~L~~~Gf~nV~~L~GGi~~w~~~g~~~~ 131 (247)
...+........+++++ +||+||.+|.| +.++++.|+..||++|++|+||+.+|..+++|+.
T Consensus 71 ~~~~~~~~~~~gi~~~~-~ivvyc~~g~~~a~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~ 133 (280)
T 1urh_A 71 PETFAVAMRELGVNQDK-HLIVYDEGNLFSAPRAWWMLRTFGVEKVSILGGGLAGWQRDDLLLE 133 (280)
T ss_dssp HHHHHHHHHHTTCCTTS-EEEEECSSSCSSHHHHHHHHHHTTCSCEEEETTHHHHHHHTTCCCB
T ss_pred HHHHHHHHHHcCCCCCC-eEEEECCCCCccHHHHHHHHHHcCCCCEEEecCCHHHHHHCCCccc
Confidence 11111100011245654 79999999999 9999999999999999999999999999887643
No 31
>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A
Probab=99.73 E-value=3.2e-18 Score=154.15 Aligned_cols=112 Identities=12% Similarity=0.172 Sum_probs=82.3
Q ss_pred CCHHHHHHHhhcCCchhhhhcccCCCCeEEEEcCCchh-hhcccCCCcccCCcccccccc--CCc-chhhhhccCCccCC
Q 025834 6 LAPSEWRNKLEAGKDIDKASNSDLNRDFILLDVRNGYE-WDIGHFHGARRPDVDCFRSTS--FGL-SQREAFASDPLADL 81 (247)
Q Consensus 6 Lsp~e~~~~l~~~~~~~l~~~~~~~~~~vvIDvRn~~E-~~~GhipGAi~i~~~~~~~~~--~~~-~~~~~~~~~~l~~l 81 (247)
|+++++.+++.+ ++++|||||+..| |..||||||+|+|+..+...+ ... ...++........+
T Consensus 42 is~~~l~~~l~~-------------~~~~iiDvR~~~e~y~~gHIpGAi~ip~~~~~~~~~~~~~~~~~~~~~~l~~lgi 108 (318)
T 3hzu_A 42 VTADWLSAHMGA-------------PGLAIVESDEDVLLYDVGHIPGAVKIDWHTDLNDPRVRDYINGEQFAELMDRKGI 108 (318)
T ss_dssp ECHHHHHHHTTC-------------TTEEEEECCSSTTSGGGCBCTTEEECCHHHHHBCSSSSSBCCHHHHHHHHHHTTC
T ss_pred ecHHHHHHhccC-------------CCEEEEECCCChhHHhcCcCCCCeEeCchhhhccCcccCCCCHHHHHHHHHHcCC
Confidence 677777777764 6799999999887 999999999999975321111 000 01111110001125
Q ss_pred CCCCceEEEEeCCCc-hHHHHHHHHHHcCCCcEEEccchHHHHHHCcCCce
Q 025834 82 DKEKTDILMYCTGGI-RCDVYSTILRQRGFHNLYTLKGGVSHYLENEGPVE 131 (247)
Q Consensus 82 ~k~~~~Iv~YCtgG~-R~e~aa~~L~~~Gf~nV~~L~GGi~~w~~~g~~~~ 131 (247)
++++ +||+||.+|. |+.++++.|+..||++|++|+||+.+|.++++|+.
T Consensus 109 ~~~~-~vVvyc~~g~~~a~~a~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~ 158 (318)
T 3hzu_A 109 ARDD-TVVIYGDKSNWWAAYALWVFTLFGHADVRLLNGGRDLWLAERRETT 158 (318)
T ss_dssp CTTC-EEEEECSGGGHHHHHHHHHHHHTTCSCEEEETTHHHHHHHTTCCCB
T ss_pred CCCC-eEEEECCCCCccHHHHHHHHHHcCCCceEEccCCHHHHhhcCCCcc
Confidence 5654 7999999887 89999999999999999999999999999988754
No 32
>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2
Probab=99.73 E-value=2.3e-18 Score=151.48 Aligned_cols=113 Identities=18% Similarity=0.130 Sum_probs=79.3
Q ss_pred CCCHHHHHHHhhcCCchhhhhcccCCCCeEEEEcCCchhh-----------hcccCCCcccCCccccccccCCcchhhhh
Q 025834 5 PLAPSEWRNKLEAGKDIDKASNSDLNRDFILLDVRNGYEW-----------DIGHFHGARRPDVDCFRSTSFGLSQREAF 73 (247)
Q Consensus 5 ~Lsp~e~~~~l~~~~~~~l~~~~~~~~~~vvIDvRn~~E~-----------~~GhipGAi~i~~~~~~~~~~~~~~~~~~ 73 (247)
.++++++.+++.+ ++++|||||++.|| ..||||||+|+|+..+.+.......+++.
T Consensus 153 ~i~~~e~~~~~~~-------------~~~~liDvR~~~e~~G~~~~~~~~~~~ghIpgA~nip~~~~~~~~~~~~~~~l~ 219 (280)
T 1urh_A 153 VVKVTDVLLASHE-------------NTAQIIDARPAARFNAEVDEPRPGLRRGHIPGALNVPWTELVREGELKTTDELD 219 (280)
T ss_dssp BCCHHHHHHHHHH-------------TCSEEEECSCHHHHSSCCCC----CCSSSCTTCEECCGGGGBSSSSBCCHHHHH
T ss_pred EEcHHHHHHHhcC-------------CCcEEEeCCchhhcccccCCCCCCCcCccCCCceEeeHHHhhcCCccCCHHHHH
Confidence 3677777777764 57899999999999 68999999999998775411111222221
Q ss_pred ccCCccCCCCCCceEEEEeCCCchHHHHHHHHHHcCCCcEEEccchHHHHHHC-cCCce
Q 025834 74 ASDPLADLDKEKTDILMYCTGGIRCDVYSTILRQRGFHNLYTLKGGVSHYLEN-EGPVE 131 (247)
Q Consensus 74 ~~~~l~~l~k~~~~Iv~YCtgG~R~e~aa~~L~~~Gf~nV~~L~GGi~~w~~~-g~~~~ 131 (247)
.......+++++ +||+||.+|.||..++..|+.+||++|+.|+||+.+|... +.|+.
T Consensus 220 ~~~~~~~~~~~~-~ivv~C~~G~rs~~a~~~L~~~G~~~v~~~~GG~~~W~~~~~~Pv~ 277 (280)
T 1urh_A 220 AIFFGRGVSYDK-PIIVSCGSGVTAAVVLLALATLDVPNVKLYDGAWSEWGARADLPVE 277 (280)
T ss_dssp HHHHTTTCCSSS-CEEEECCSSSTHHHHHHHHHHTTCSSCEEECCSCCC----------
T ss_pred HHHHHcCCCCCC-CEEEECChHHHHHHHHHHHHHcCCCCceeeCChHHHHhcCCCCCce
Confidence 110111355654 7999999999999999999999999999999999999874 77753
No 33
>1qb0_A Protein (M-phase inducer phosphatase 2 (CDC25B)); hydrolase, cell cycle phosphatase, dual specificity protein phosphatase; 1.91A {Homo sapiens} SCOP: c.46.1.1 PDB: 1cwr_A 1cws_A 2uzq_A
Probab=99.73 E-value=6.3e-18 Score=143.91 Aligned_cols=111 Identities=17% Similarity=0.303 Sum_probs=80.4
Q ss_pred CCCCHHHHHHHhhcCCchhhhhcccCCCCeEEEEcCCchhhhcccCCCcccCCccccccccCCcchhhhhccCCccCCCC
Q 025834 4 IPLAPSEWRNKLEAGKDIDKASNSDLNRDFILLDVRNGYEWDIGHFHGARRPDVDCFRSTSFGLSQREAFASDPLADLDK 83 (247)
Q Consensus 4 ~~Lsp~e~~~~l~~~~~~~l~~~~~~~~~~vvIDvRn~~E~~~GhipGAi~i~~~~~~~~~~~~~~~~~~~~~~l~~l~k 83 (247)
..|+++++.++++.... ...++++|||||++.||..||||||+|+|...+.+. .+.....+ ..++
T Consensus 44 ~~Is~~el~~~l~~~~~-------~~~~~~~lIDvR~~~Ey~~gHIpGAinip~~~l~~~-------~~~~~~~l-~~~~ 108 (211)
T 1qb0_A 44 KYISPETMVALLTGKFS-------NIVDKFVIVDCRYPYEYEGGHIKTAVNLPLERDAES-------FLLKSPIA-PCSL 108 (211)
T ss_dssp CEECHHHHHHHHTTTTT-------TTEEEEEEEECSCHHHHHTCEETTCEECCSHHHHHH-------HHHTTTCC-CSST
T ss_pred CeeCHHHHHHHHhcccc-------cCCCCEEEEECCCHHHHccCcCCCCEECCchHHHHH-------hhhhhhhc-cccC
Confidence 45677777777653100 001378999999999999999999999998765321 00000011 1124
Q ss_pred CCceE--EEEeC-CCchHHHHHHHHHH----------cCCCcEEEccchHHHHHHCcCCc
Q 025834 84 EKTDI--LMYCT-GGIRCDVYSTILRQ----------RGFHNLYTLKGGVSHYLENEGPV 130 (247)
Q Consensus 84 ~~~~I--v~YCt-gG~R~e~aa~~L~~----------~Gf~nV~~L~GGi~~w~~~g~~~ 130 (247)
+ ++| |+||. +|.|+..++.+|++ .||++|++|+||+.+|.+++++.
T Consensus 109 d-~~ivvVvyC~~sG~rs~~aa~~L~~~~~~~~~l~~~G~~~V~~L~GG~~~W~~~g~~~ 167 (211)
T 1qb0_A 109 D-KRVILIFHCEFSSERGPRMCRFIRERDRAVNDYPSLYYPEMYILKGGYKEFFPQHPNF 167 (211)
T ss_dssp T-SEEEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTCGGG
T ss_pred C-CCeEEEEECCCCCccHHHHHHHHHhhhhhhhhhhhcCCCeEEEECCHHHHHHHHCccc
Confidence 4 366 88999 99999999999986 69999999999999999988775
No 34
>3olh_A MST, 3-mercaptopyruvate sulfurtransferase; structural genomics, structural genomics consortium, SGC, RH fold; 2.50A {Homo sapiens}
Probab=99.72 E-value=1.2e-17 Score=149.34 Aligned_cols=117 Identities=20% Similarity=0.246 Sum_probs=83.6
Q ss_pred CCCCHHHHHHHhhcCCchhhhhcccCCCCeEEEEcC---------CchhhhcccCCCcccCCcccccccc----CCcch-
Q 025834 4 IPLAPSEWRNKLEAGKDIDKASNSDLNRDFILLDVR---------NGYEWDIGHFHGARRPDVDCFRSTS----FGLSQ- 69 (247)
Q Consensus 4 ~~Lsp~e~~~~l~~~~~~~l~~~~~~~~~~vvIDvR---------n~~E~~~GhipGAi~i~~~~~~~~~----~~~~~- 69 (247)
+.|+|+++.+++.+.. .+++++||||| +..||..||||||+|+|++.+.+.. ...+.
T Consensus 22 ~lIs~~~l~~~l~~~~---------~~~~~~ilDvR~~~~~~~~~~~~ey~~gHIpGAi~i~~~~~~~~~~~~~~~lp~~ 92 (302)
T 3olh_A 22 SMVSAQWVAEALRAPR---------AGQPLQLLDASWYLPKLGRDARREFEERHIPGAAFFDIDQCSDRTSPYDHMLPGA 92 (302)
T ss_dssp CEECHHHHHHHHHCCC---------SSCCEEEEECCCCCCC--CCHHHHHHHSCCTTCEECCTTTSSCSSCSSSSCCCCH
T ss_pred CccCHHHHHHHhcCcC---------CCCCEEEEEeecCCCccCcccHHHHhhCcCCCCeEeCHHHhcCcCCCCCCCCCCH
Confidence 4588999998887510 01489999999 7789999999999999987654321 11111
Q ss_pred hhhhccCCccCCCCCCceEEEEeC---CCchHHHHHHHHHHcCCCcEEEccchHHHHHHCcCCc
Q 025834 70 REAFASDPLADLDKEKTDILMYCT---GGIRCDVYSTILRQRGFHNLYTLKGGVSHYLENEGPV 130 (247)
Q Consensus 70 ~~~~~~~~l~~l~k~~~~Iv~YCt---gG~R~e~aa~~L~~~Gf~nV~~L~GGi~~w~~~g~~~ 130 (247)
..+........+++++ +||+||. ++.++.++++.|+..||++|++|+||+.+|.++++|+
T Consensus 93 ~~~~~~~~~lgi~~~~-~VVvyc~~~~g~~~a~ra~~~L~~~G~~~V~~L~GG~~~W~~~g~p~ 155 (302)
T 3olh_A 93 EHFAEYAGRLGVGAAT-HVVIYDASDQGLYSAPRVWWMFRAFGHHAVSLLDGGLRHWLRQNLPL 155 (302)
T ss_dssp HHHHHHHHHTTCCSSC-EEEEECCCTTSCSSHHHHHHHHHHTTCCCEEEETTHHHHHHHSCCC-
T ss_pred HHHHHHHHHcCCCCCC-EEEEEeCCCCCcchHHHHHHHHHHcCCCcEEECCCCHHHHHHcCCCc
Confidence 1111100011235554 7999996 3456999999999999999999999999999988764
No 35
>3olh_A MST, 3-mercaptopyruvate sulfurtransferase; structural genomics, structural genomics consortium, SGC, RH fold; 2.50A {Homo sapiens}
Probab=99.71 E-value=5.6e-18 Score=151.44 Aligned_cols=99 Identities=18% Similarity=0.190 Sum_probs=77.1
Q ss_pred CCeEEEEcCCchhh-----------hcccCCCcccCCcccccccc-CCcchhhhhccCCccCCCCCCceEEEEeCCCchH
Q 025834 31 RDFILLDVRNGYEW-----------DIGHFHGARRPDVDCFRSTS-FGLSQREAFASDPLADLDKEKTDILMYCTGGIRC 98 (247)
Q Consensus 31 ~~~vvIDvRn~~E~-----------~~GhipGAi~i~~~~~~~~~-~~~~~~~~~~~~~l~~l~k~~~~Iv~YCtgG~R~ 98 (247)
++++|||||++.|| ..||||||+|+|+..+.+.. .+...+++........+++++ +||+||.+|.|+
T Consensus 189 ~~~~liDvR~~~ef~G~~~~p~~~~~~GhIpGAiniP~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~-~iv~yC~sG~rs 267 (302)
T 3olh_A 189 RRFQVVDSRATGRFRGTEPEPRDGIEPGHIPGTVNIPFTDFLSQEGLEKSPEEIRHLFQEKKVDLSK-PLVATCGSGVTA 267 (302)
T ss_dssp CCSEEEECSCHHHHHTSSCCSSTTCCCCCCTTCEECCGGGGBCSSSCBCCHHHHHHHHHHTTCCTTS-CEEEECSSSSTT
T ss_pred CCcEEEecCCHHHccccccCCCcCCcCccCCCceecCHHHhcCCCCccCCHHHHHHHHHhcCCCCCC-CEEEECCChHHH
Confidence 67899999999999 78999999999998764321 122222221111111355654 799999999999
Q ss_pred HHHHHHHHHcCCCcEEEccchHHHHHHCcCCc
Q 025834 99 DVYSTILRQRGFHNLYTLKGGVSHYLENEGPV 130 (247)
Q Consensus 99 e~aa~~L~~~Gf~nV~~L~GGi~~w~~~g~~~ 130 (247)
..++..|+.+||++|+.|+||+.+|...+.|.
T Consensus 268 ~~a~~~L~~~G~~~v~~~~Gg~~~W~~~~~P~ 299 (302)
T 3olh_A 268 CHVALGAYLCGKPDVPIYDGSWVEWYMRARPE 299 (302)
T ss_dssp HHHHHHHHTTTCCCCCEESSHHHHHHHHHCCC
T ss_pred HHHHHHHHHcCCCCeeEeCCcHHHHhhccCCC
Confidence 99999999999999999999999999988874
No 36
>1rhs_A Sulfur-substituted rhodanese; transferase, sulfurtransferase; 1.36A {Bos taurus} SCOP: c.46.1.2 c.46.1.2 PDB: 1boh_A 1boi_A 1orb_A 2ora_A 1dp2_A* 1rhd_A
Probab=99.71 E-value=1.1e-17 Score=148.71 Aligned_cols=113 Identities=19% Similarity=0.195 Sum_probs=84.4
Q ss_pred CCCHHHHHHHhhcCCchhhhhcccCCCCeEEEEcCCchhh------------hcccCCCcccCCcccccccc-CCcchhh
Q 025834 5 PLAPSEWRNKLEAGKDIDKASNSDLNRDFILLDVRNGYEW------------DIGHFHGARRPDVDCFRSTS-FGLSQRE 71 (247)
Q Consensus 5 ~Lsp~e~~~~l~~~~~~~l~~~~~~~~~~vvIDvRn~~E~------------~~GhipGAi~i~~~~~~~~~-~~~~~~~ 71 (247)
.++++++.+++.. ++++|||||++.|| ..||||||+|+|+..+.+.. .+...++
T Consensus 161 ~i~~~e~~~~~~~-------------~~~~liDvR~~~e~~G~~~~~~~~~~~~ghIpgA~nip~~~l~~~~~~~~~~~~ 227 (296)
T 1rhs_A 161 LKTYEQVLENLES-------------KRFQLVDSRAQGRYLGTQPEPDAVGLDSGHIRGSVNMPFMNFLTEDGFEKSPEE 227 (296)
T ss_dssp EECHHHHHHHHHH-------------CCSEEEECSCHHHHHTSSCCSSSSSCCCCEETTCEECCGGGGBCTTSCBCCHHH
T ss_pred EEcHHHHHHHhcC-------------CCceEEeCCchhhcccccCCcccCCCcCccCCCCEeecHHHhcCCCCcCCCHHH
Confidence 3566667666654 57899999999999 89999999999998774311 1111122
Q ss_pred hhccCCccCCCCCCceEEEEeCCCchHHHHHHHHHHcCCCcEEEccchHHHHHH-CcCCce
Q 025834 72 AFASDPLADLDKEKTDILMYCTGGIRCDVYSTILRQRGFHNLYTLKGGVSHYLE-NEGPVE 131 (247)
Q Consensus 72 ~~~~~~l~~l~k~~~~Iv~YCtgG~R~e~aa~~L~~~Gf~nV~~L~GGi~~w~~-~g~~~~ 131 (247)
+........+++++ +||+||.+|.|+..++..|+.+||++|+.|+|||.+|.. .+.|+.
T Consensus 228 l~~~~~~~~~~~~~-~ivv~C~sG~rs~~a~~~L~~~G~~~v~~~~GG~~~W~~~~~~pv~ 287 (296)
T 1rhs_A 228 LRAMFEAKKVDLTK-PLIATCRKGVTACHIALAAYLCGKPDVAIYDGSWFEWFHRAPPETW 287 (296)
T ss_dssp HHHHHHHTTCCTTS-CEEEECSSSSTHHHHHHHHHHTTCCCCEEESSHHHHHHHHSCGGGE
T ss_pred HHHHHHHcCCCCCC-CEEEECCcHHHHHHHHHHHHHcCCCCceeeCCcHHHHhcCCCCCcc
Confidence 21100011345654 799999999999999999999999999999999999988 677765
No 37
>2ouc_A Dual specificity protein phosphatase 10; rhodanese fold, hydrolase; 2.20A {Homo sapiens}
Probab=99.71 E-value=5e-18 Score=133.85 Aligned_cols=119 Identities=16% Similarity=0.212 Sum_probs=77.3
Q ss_pred CCCHHHHHHHhhcCCchhhhhcccCCCCeEEEEcCCchhhhcccCCCcccCCccccccc-c---CCcchhhhhccCCc--
Q 025834 5 PLAPSEWRNKLEAGKDIDKASNSDLNRDFILLDVRNGYEWDIGHFHGARRPDVDCFRST-S---FGLSQREAFASDPL-- 78 (247)
Q Consensus 5 ~Lsp~e~~~~l~~~~~~~l~~~~~~~~~~vvIDvRn~~E~~~GhipGAi~i~~~~~~~~-~---~~~~~~~~~~~~~l-- 78 (247)
.|+|+++.+++...... .+ .+++++|||||++.||..||||||+|+|...+... . .......+......
T Consensus 2 ~Is~~~l~~~l~~~~~~----~l-~~~~~~iiDvR~~~e~~~ghIpgA~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (142)
T 2ouc_A 2 IIYPNDLAKKMTKCSKS----HL-PSQGPVIIDCRPFMEYNKSHIQGAVHINCADKISRRRLQQGKITVLDLISCREGKD 76 (142)
T ss_dssp EECHHHHHHHHHC---------------CEEEECSCHHHHHHEEETTCEECCCSSHHHHHHHHTTSSCHHHHHHTTSCTT
T ss_pred ccCHHHHHHHHHhcccc----cC-CCCCCEEEEeCCHHHhhhhhccCccccCccHHHHHHHhhcCCcchhhhCCChhhhH
Confidence 47889998855531100 01 12578999999999999999999999999764210 0 00000011100000
Q ss_pred --cCCCCCCceEEEEeCCCchH---------HHHHHHHHHcCCCcEEEccchHHHHHHCcCCce
Q 025834 79 --ADLDKEKTDILMYCTGGIRC---------DVYSTILRQRGFHNLYTLKGGVSHYLENEGPVE 131 (247)
Q Consensus 79 --~~l~k~~~~Iv~YCtgG~R~---------e~aa~~L~~~Gf~nV~~L~GGi~~w~~~g~~~~ 131 (247)
... ++ ++||+||.+|.++ ..++..|...|| +|++|+||+.+|.++++++.
T Consensus 77 ~~~~~-~~-~~ivvyc~~g~~~~~~~~~~~~~~~~~~L~~~G~-~v~~l~GG~~~w~~~g~~~~ 137 (142)
T 2ouc_A 77 SFKRI-FS-KEIIVYDENTNEPSRVMPSQPLHIVLESLKREGK-EPLVLKGGLSSFKQNHENLC 137 (142)
T ss_dssp HHHHH-HH-SCEEEECSSCCCGGGCCTTSHHHHHHHHHHHTTC-CCEEETTHHHHHTTTCGGGE
T ss_pred HHhcc-CC-CcEEEEECCCCchhhcCcccHHHHHHHHHHHcCC-cEEEEccCHHHHHHHCHHhh
Confidence 000 12 4799999999885 457778899999 99999999999999887754
No 38
>3aay_A Putative thiosulfate sulfurtransferase; sulfurtranserase, structural genomics, PSI, structure initiative; 1.90A {Mycobacterium tuberculosis} PDB: 3aax_A 3hwi_A
Probab=99.70 E-value=1.7e-17 Score=145.68 Aligned_cols=113 Identities=13% Similarity=0.172 Sum_probs=81.7
Q ss_pred CCCHHHHHHHhhcCCchhhhhcccCCCCeEEEEcCC-chhhhcccCCCcccCCccccccccC--Cc-chhhhhccCCccC
Q 025834 5 PLAPSEWRNKLEAGKDIDKASNSDLNRDFILLDVRN-GYEWDIGHFHGARRPDVDCFRSTSF--GL-SQREAFASDPLAD 80 (247)
Q Consensus 5 ~Lsp~e~~~~l~~~~~~~l~~~~~~~~~~vvIDvRn-~~E~~~GhipGAi~i~~~~~~~~~~--~~-~~~~~~~~~~l~~ 80 (247)
.|+++++.+++.+ ++++|||||+ +.||..||||||+|+|...+...+. .. ....+........
T Consensus 7 ~is~~~l~~~l~~-------------~~~~liDvR~~~~ey~~ghIpgA~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~g 73 (277)
T 3aay_A 7 LVSADWAESNLHA-------------PKVVFVEVDEDTSAYDRDHIAGAIKLDWRTDLQDPVKRDFVDAQQFSKLLSERG 73 (277)
T ss_dssp EECHHHHHTTTTC-------------TTEEEEEEESSSHHHHHCBSTTCEEEETTTTTBCSSSSSBCCHHHHHHHHHHHT
T ss_pred eEcHHHHHHHhCC-------------CCEEEEEcCCChhhHhhCCCCCcEEecccccccCCCCCCCCCHHHHHHHHHHcC
Confidence 4677777776653 5789999998 8999999999999999875322110 00 0111110000112
Q ss_pred CCCCCceEEEEeCCCc-hHHHHHHHHHHcCCCcEEEccchHHHHHHCcCCce
Q 025834 81 LDKEKTDILMYCTGGI-RCDVYSTILRQRGFHNLYTLKGGVSHYLENEGPVE 131 (247)
Q Consensus 81 l~k~~~~Iv~YCtgG~-R~e~aa~~L~~~Gf~nV~~L~GGi~~w~~~g~~~~ 131 (247)
+++++ +||+||.+|. ++.++++.|+..||++|++|+||+.+|.+++.|+.
T Consensus 74 i~~~~-~vvvyc~~g~~~s~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~ 124 (277)
T 3aay_A 74 IANED-TVILYGGNNNWFAAYAYWYFKLYGHEKVKLLDGGRKKWELDGRPLS 124 (277)
T ss_dssp CCTTS-EEEEECSGGGHHHHHHHHHHHHTTCCSEEEETTHHHHHHHTTCCCB
T ss_pred CCCCC-eEEEECCCCCchHHHHHHHHHHcCCCcEEEecCCHHHHHHcCCccc
Confidence 55654 7999999875 68899999999999999999999999999887643
No 39
>1rhs_A Sulfur-substituted rhodanese; transferase, sulfurtransferase; 1.36A {Bos taurus} SCOP: c.46.1.2 c.46.1.2 PDB: 1boh_A 1boi_A 1orb_A 2ora_A 1dp2_A* 1rhd_A
Probab=99.69 E-value=5.2e-17 Score=144.27 Aligned_cols=118 Identities=19% Similarity=0.236 Sum_probs=85.6
Q ss_pred CCCCCHHHHHHHhhcCCchhhhhcccCCCCeEEEEcC--------CchhhhcccCCCcccCCcccccccc----CCcc-h
Q 025834 3 AIPLAPSEWRNKLEAGKDIDKASNSDLNRDFILLDVR--------NGYEWDIGHFHGARRPDVDCFRSTS----FGLS-Q 69 (247)
Q Consensus 3 a~~Lsp~e~~~~l~~~~~~~l~~~~~~~~~~vvIDvR--------n~~E~~~GhipGAi~i~~~~~~~~~----~~~~-~ 69 (247)
...|+++++.+++.+.. .+++++||||| +..||..||||||+|+|...|.+.. .... .
T Consensus 7 ~~~is~~~l~~~l~~~~---------~~~~~~liDvR~~~~~~~~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~lp~~ 77 (296)
T 1rhs_A 7 RALVSTKWLAESVRAGK---------VGPGLRVLDASWYSPGTREARKEYLERHVPGASFFDIEECRDKASPYEVMLPSE 77 (296)
T ss_dssp CSEECHHHHHHHHHTTC---------CBTTEEEEECCCCCTTSCCHHHHHHHSBCTTCEECCTTTSSCTTSSSSSCCCCH
T ss_pred CceeeHHHHHHHHhccc---------cCCCeEEEEecccCcCCcchhhhHhhCcCCCCEEeCHHHhcCCCCCCCCCCCCH
Confidence 35688999999886410 01478999999 5789999999999999998665321 0110 0
Q ss_pred hhhhccCCccCCCCCCceEEEEeCC--Cch-HHHHHHHHHHcCCCcEEEccchHHHHHHCcCCc
Q 025834 70 REAFASDPLADLDKEKTDILMYCTG--GIR-CDVYSTILRQRGFHNLYTLKGGVSHYLENEGPV 130 (247)
Q Consensus 70 ~~~~~~~~l~~l~k~~~~Iv~YCtg--G~R-~e~aa~~L~~~Gf~nV~~L~GGi~~w~~~g~~~ 130 (247)
+.+........+++++ +||+||.+ |.+ +.++++.|+..||++|++|+||+.+|.++++|+
T Consensus 78 ~~~~~~l~~lgi~~~~-~vVvyc~~~~g~~~a~~a~~~L~~~G~~~V~~L~GG~~~W~~~g~p~ 140 (296)
T 1rhs_A 78 AGFADYVGSLGISNDT-HVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVLNGGFRNWLKEGHPV 140 (296)
T ss_dssp HHHHHHHHHTTCCTTC-EEEEECCCSSSCSSHHHHHHHHHHTTCCCEEEETTHHHHHHHTTCCC
T ss_pred HHHHHHHHHcCCCCCC-eEEEEcCCCCCcchHHHHHHHHHHcCCCcEEEcCCCHHHHHHcCCcc
Confidence 1111000011245654 79999998 887 789999999999999999999999999988764
No 40
>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2
Probab=99.69 E-value=9.4e-18 Score=147.81 Aligned_cols=113 Identities=15% Similarity=0.229 Sum_probs=82.4
Q ss_pred CCCCHHHHHHHhhcCCchhhhhcccCCCCeEEEEcC-CchhhhcccCCCcccCCccccccccC--Ccc-hhhhhccCCcc
Q 025834 4 IPLAPSEWRNKLEAGKDIDKASNSDLNRDFILLDVR-NGYEWDIGHFHGARRPDVDCFRSTSF--GLS-QREAFASDPLA 79 (247)
Q Consensus 4 ~~Lsp~e~~~~l~~~~~~~l~~~~~~~~~~vvIDvR-n~~E~~~GhipGAi~i~~~~~~~~~~--~~~-~~~~~~~~~l~ 79 (247)
..|+++++.+++++ ++++||||| ++.||..||||||+|+|...+...+. ... .+.+.......
T Consensus 8 ~~is~~~l~~~l~~-------------~~~~liDvR~~~~e~~~ghIpgA~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (285)
T 1uar_A 8 VLVSTDWVQEHLED-------------PKVRVLEVDEDILLYDTGHIPGAQKIDWQRDFWDPVVRDFISEEEFAKLMERL 74 (285)
T ss_dssp GEECHHHHHTTTTC-------------TTEEEEEECSSTTHHHHCBCTTCEEECHHHHHBCSSSSSBCCHHHHHHHHHHT
T ss_pred ceEcHHHHHHhcCC-------------CCEEEEEcCCCcchhhcCcCCCCEECCchhhccCCcccCCCCHHHHHHHHHHc
Confidence 35788888877764 579999999 68999999999999999874221110 000 11111100011
Q ss_pred CCCCCCceEEEEeCCCc-hHHHHHHHHHHcCCCcEEEccchHHHHHHCcCCc
Q 025834 80 DLDKEKTDILMYCTGGI-RCDVYSTILRQRGFHNLYTLKGGVSHYLENEGPV 130 (247)
Q Consensus 80 ~l~k~~~~Iv~YCtgG~-R~e~aa~~L~~~Gf~nV~~L~GGi~~w~~~g~~~ 130 (247)
.+++++ +||+||.+|. ++.++++.|+..||++|++|+||+.+|..+++|+
T Consensus 75 gi~~~~-~ivvyc~~g~~~s~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~ 125 (285)
T 1uar_A 75 GISNDT-TVVLYGDKNNWWAAYAFWFFKYNGHKDVRLMNGGRQKWVEEGRPL 125 (285)
T ss_dssp TCCTTC-EEEEECHHHHHHHHHHHHHHHHTTCSCEEEETTHHHHHHHHTCCC
T ss_pred CCCCCC-eEEEECCCCCccHHHHHHHHHHcCCCCeEEecCCHHHHHHCCCcc
Confidence 245654 7999999988 7999999999999999999999999999877654
No 41
>1hzm_A Dual specificity protein phosphatase 6; hydrolase; NMR {Homo sapiens} SCOP: c.46.1.1
Probab=99.68 E-value=1.1e-17 Score=134.45 Aligned_cols=109 Identities=17% Similarity=0.280 Sum_probs=74.4
Q ss_pred CCCCHHHHHHHhhcCCchhhhhcccCCCCeEEEEcCCchhhhcccCCCcccCCccccc--cc-----c--CCcchhhhhc
Q 025834 4 IPLAPSEWRNKLEAGKDIDKASNSDLNRDFILLDVRNGYEWDIGHFHGARRPDVDCFR--ST-----S--FGLSQREAFA 74 (247)
Q Consensus 4 ~~Lsp~e~~~~l~~~~~~~l~~~~~~~~~~vvIDvRn~~E~~~GhipGAi~i~~~~~~--~~-----~--~~~~~~~~~~ 74 (247)
..|+++++.+++++. .++++|||||++.||..||||||+|+|...+. +. + ...+..+.
T Consensus 16 ~~is~~~l~~~l~~~-----------~~~~~liDvR~~~ey~~gHIpgAinip~~~~~~~~~~~~~~~~~~~l~~~~~-- 82 (154)
T 1hzm_A 16 ISKTVAWLNEQLELG-----------NERLLLMDCRPQELYESSHIESAINVAIPGIMLRRLQKGNLPVRALFTRGED-- 82 (154)
T ss_dssp SBSCCCCHHHHHHHC-----------SSSCEEECCSTTHHHHHHTSSSCCCCCCSSHHHHTBCCSCCCTTTTSTTSHH--
T ss_pred cccCHHHHHHHHhCC-----------CCCEEEEEcCCHHHHhhccccCceEeCccHHHHhhhhcCcccHHHhCCCHHH--
Confidence 567788888777641 13789999999999999999999999987642 10 0 00000000
Q ss_pred cCCccCCCCCCceEEEEeCCCchH-------HHHHHHHHHc---CCCcEEEccchHHHHHHCc
Q 025834 75 SDPLADLDKEKTDILMYCTGGIRC-------DVYSTILRQR---GFHNLYTLKGGVSHYLENE 127 (247)
Q Consensus 75 ~~~l~~l~k~~~~Iv~YCtgG~R~-------e~aa~~L~~~---Gf~nV~~L~GGi~~w~~~g 127 (247)
...+..+++++ +||+||.+|.++ ..+++.|+.. ||+ |++|+||+.+|..+.
T Consensus 83 ~~~~~~~~~~~-~iVvyc~~g~~~~~~~~aa~~~~~~l~~l~~~G~~-v~~L~GG~~~W~~~~ 143 (154)
T 1hzm_A 83 RDRFTRRCGTD-TVVLYDESSSDWNENTGGESLLGLLLKKLKDEGCR-AFYLEGGFSKFQAEF 143 (154)
T ss_dssp HHHHHHSTTSS-CEEECCCSSSSSCSCSSCCSHHHHHHHHHHHTTCC-CEECCCCHHHHHHHH
T ss_pred HHHHhccCCCC-eEEEEeCCCCccccccccchHHHHHHHHHHHCCCc-eEEEcChHHHHHHHC
Confidence 00112234544 799999998875 3445566654 998 999999999998763
No 42
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.68 E-value=4.7e-17 Score=153.24 Aligned_cols=86 Identities=28% Similarity=0.520 Sum_probs=75.5
Q ss_pred CCeEEEEcCCchhhhcccCCCcccCCccccccccCCcchhhhhccCCccCCCCCCceEEEEeCCCchHHHHHHHHHHcCC
Q 025834 31 RDFILLDVRNGYEWDIGHFHGARRPDVDCFRSTSFGLSQREAFASDPLADLDKEKTDILMYCTGGIRCDVYSTILRQRGF 110 (247)
Q Consensus 31 ~~~vvIDvRn~~E~~~GhipGAi~i~~~~~~~~~~~~~~~~~~~~~~l~~l~k~~~~Iv~YCtgG~R~e~aa~~L~~~Gf 110 (247)
++.+|||+|++.||..||||||+|+|...+.+ .+..+++++ +||+||.+|.|+..++..|+..||
T Consensus 388 ~~~~lvDvR~~~e~~~ghIpgA~~ip~~~l~~--------------~~~~l~~~~-~vvv~C~~G~ra~~a~~~L~~~G~ 452 (474)
T 3tp9_A 388 QGLWLLDVRNVDEWAGGHLPQAHHIPLSKLAA--------------HIHDVPRDG-SVCVYCRTGGRSAIAASLLRAHGV 452 (474)
T ss_dssp TCCEEEECSCHHHHHHCBCTTCEECCHHHHTT--------------TGGGSCSSS-CEEEECSSSHHHHHHHHHHHHHTC
T ss_pred CCcEEEECCCHHHHhcCcCCCCEECCHHHHHH--------------HHhcCCCCC-EEEEECCCCHHHHHHHHHHHHcCC
Confidence 67899999999999999999999999976642 123456654 799999999999999999999999
Q ss_pred CcEEEccchHHHHHHCcCCce
Q 025834 111 HNLYTLKGGVSHYLENEGPVE 131 (247)
Q Consensus 111 ~nV~~L~GGi~~w~~~g~~~~ 131 (247)
++|+.|+||+.+|.+++.|++
T Consensus 453 ~~v~~~~Gg~~~W~~~g~p~~ 473 (474)
T 3tp9_A 453 GDVRNMVGGYEAWRGKGFPVE 473 (474)
T ss_dssp SSEEEETTHHHHHHHTTCCCB
T ss_pred CCEEEecChHHHHHhCCCCCC
Confidence 999999999999999988853
No 43
>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2
Probab=99.68 E-value=7.2e-17 Score=142.14 Aligned_cols=115 Identities=20% Similarity=0.186 Sum_probs=82.4
Q ss_pred CCHHHHHHHhhcCCchhhhhcccCCCCeEEEEcCCchhhh----------------cccCCCcccCCccccccccC-Ccc
Q 025834 6 LAPSEWRNKLEAGKDIDKASNSDLNRDFILLDVRNGYEWD----------------IGHFHGARRPDVDCFRSTSF-GLS 68 (247)
Q Consensus 6 Lsp~e~~~~l~~~~~~~l~~~~~~~~~~vvIDvRn~~E~~----------------~GhipGAi~i~~~~~~~~~~-~~~ 68 (247)
++++++.++++.. . ..+..|||||++.||. .||||||+|+|+..+.+... ...
T Consensus 148 i~~~el~~~l~~~---------~-~~~~~liDvR~~~e~~g~~~~~~~~~~~~~~~~ghIpgA~~ip~~~~~~~~~~~~~ 217 (285)
T 1uar_A 148 AYRDDVLEHIIKV---------K-EGKGALVDVRSPQEYRGELTHMPDYPQEGALRAGHIPGAKNIPWAKAVNPDGTFKS 217 (285)
T ss_dssp ECHHHHHHHHHHH---------H-TTSEEEEECSCHHHHHTCC--------CCCSCCSBCTTCEECCGGGGBCTTSCBCC
T ss_pred EcHHHHHHHHhhc---------c-cCCCcEEEcCCccceeeeccccccccccccccCCcCCCccccCHHHhcCCCCcCCC
Confidence 6677777666310 0 0234799999999997 89999999999987643211 111
Q ss_pred hhhhhccCCccCCCCCCceEEEEeCCCchHHHHHHHHH-HcCCCcEEEccchHHHHH-HCcCCce
Q 025834 69 QREAFASDPLADLDKEKTDILMYCTGGIRCDVYSTILR-QRGFHNLYTLKGGVSHYL-ENEGPVE 131 (247)
Q Consensus 69 ~~~~~~~~~l~~l~k~~~~Iv~YCtgG~R~e~aa~~L~-~~Gf~nV~~L~GGi~~w~-~~g~~~~ 131 (247)
.+++.......++++++ +||+||.+|.|+..++..|+ .+||++|++|+||+.+|. ..++|+.
T Consensus 218 ~~~l~~~~~~~g~~~~~-~ivvyC~~G~rs~~a~~~L~~~~G~~~v~~l~GG~~~W~~~~g~pv~ 281 (285)
T 1uar_A 218 AEELRALYEPLGITKDK-DIVVYCRIAERSSHSWFVLKYLLGYPHVKNYDGSWTEWGNLVGVPIA 281 (285)
T ss_dssp HHHHHHHHGGGTCCTTS-EEEEECSSHHHHHHHHHHHHTTSCCSCEEEESSHHHHHTTSTTCCCB
T ss_pred HHHHHHHHHHcCCCCCC-CEEEECCchHHHHHHHHHHHHHcCCCCcceeCchHHHHhcCCCCCcc
Confidence 12221111111256654 79999999999999999999 999999999999999998 6788864
No 44
>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2
Probab=99.68 E-value=4.6e-17 Score=156.09 Aligned_cols=104 Identities=22% Similarity=0.242 Sum_probs=85.7
Q ss_pred CCCCCCHHHHHHHhhcCCchhhhhcccCCCCeEEEEcCCchhhhcccCCCcccCCccccccccCCcchhhhhccCCccCC
Q 025834 2 RAIPLAPSEWRNKLEAGKDIDKASNSDLNRDFILLDVRNGYEWDIGHFHGARRPDVDCFRSTSFGLSQREAFASDPLADL 81 (247)
Q Consensus 2 ra~~Lsp~e~~~~l~~~~~~~l~~~~~~~~~~vvIDvRn~~E~~~GhipGAi~i~~~~~~~~~~~~~~~~~~~~~~l~~l 81 (247)
..+.|+++++.+++.+ +++++|||||++.||..||||||+|+|...|.... .. + ..
T Consensus 5 ~~~~is~~~l~~~l~~------------~~~~~liDvR~~~e~~~ghIpgAv~ip~~~~~~~~-----~~------l-~~ 60 (539)
T 1yt8_A 5 QIAVRTFHDIRAALLA------------RRELALLDVREEDPFAQAHPLFAANLPLSRLELEI-----HA------R-VP 60 (539)
T ss_dssp -CEEECHHHHHHHHHH------------TCCBEEEECSCHHHHTTSBCTTCEECCGGGHHHHH-----HH------H-SC
T ss_pred cCcccCHHHHHHHHhC------------CCCeEEEECCCHHHHhcCcCCCCEECCHHHHHHHH-----Hh------h-CC
Confidence 3467899999998875 25799999999999999999999999998764210 01 0 11
Q ss_pred CCCCceEEEEeCCCchHHHHHHHHHHcCCCcEEEccchHHHHHHCcCCc
Q 025834 82 DKEKTDILMYCTGGIRCDVYSTILRQRGFHNLYTLKGGVSHYLENEGPV 130 (247)
Q Consensus 82 ~k~~~~Iv~YCtgG~R~e~aa~~L~~~Gf~nV~~L~GGi~~w~~~g~~~ 130 (247)
+++ ++||+||.+|.++.++++.|+..||++|++|+||+.+|.++++|+
T Consensus 61 ~~~-~~iVvyc~~g~~s~~a~~~L~~~G~~~V~~L~GG~~~W~~~g~p~ 108 (539)
T 1yt8_A 61 RRD-TPITVYDDGEGLAPVAAQRLHDLGYSDVALLDGGLSGWRNAGGEL 108 (539)
T ss_dssp CTT-SCEEEECSSSSHHHHHHHHHHHTTCSSEEEETTHHHHHHHTTCCC
T ss_pred CCC-CeEEEEECCCChHHHHHHHHHHcCCCceEEeCCCHHHHHhcCCCc
Confidence 344 479999999999999999999999999999999999999998875
No 45
>3tg1_B Dual specificity protein phosphatase 10; kinase/rhodanese-like domain, docking interaction, transfera hydrolase complex; 2.71A {Homo sapiens}
Probab=99.67 E-value=1.3e-16 Score=129.66 Aligned_cols=117 Identities=16% Similarity=0.211 Sum_probs=76.7
Q ss_pred CCCCHHHHHHHhhcCCchhhhhcccCCCCeEEEEcCCchhhhcccCCCcccCCccccc--c-cc-CCcchhhhhcc----
Q 025834 4 IPLAPSEWRNKLEAGKDIDKASNSDLNRDFILLDVRNGYEWDIGHFHGARRPDVDCFR--S-TS-FGLSQREAFAS---- 75 (247)
Q Consensus 4 ~~Lsp~e~~~~l~~~~~~~l~~~~~~~~~~vvIDvRn~~E~~~GhipGAi~i~~~~~~--~-~~-~~~~~~~~~~~---- 75 (247)
..|+|+++.+++...... ...+++++|||||++.||..||||||+|+|...+. . +. .......+...
T Consensus 11 ~~is~~el~~~l~~~~~~-----~~~~~~~~liDvR~~~e~~~ghI~ga~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 85 (158)
T 3tg1_B 11 KIIYPNDLAKKMTKCSKS-----HLPSQGPVIIDCRPFMEYNKSHIQGAVHINCADKISRRRLQQGKITVLDLISCREGK 85 (158)
T ss_dssp CEECHHHHHHHHCC---------------CEEEECSCHHHHHHCCBTTCEECCCSSHHHHHHHTTSSCCHHHHTCCCCSS
T ss_pred cEecHHHHHHHHHhcccc-----cCCCCCEEEEEcCCHHHHHhCCCCCceeechhHHHHHhhhhcCcccHHhhcCCHHHH
Confidence 457788888877631000 00025689999999999999999999999998652 0 00 00100111110
Q ss_pred CCccCCCCCCceEEEEeCCC---------chHHHHHHHHHHcCCCcEEEccchHHHHHHCcC
Q 025834 76 DPLADLDKEKTDILMYCTGG---------IRCDVYSTILRQRGFHNLYTLKGGVSHYLENEG 128 (247)
Q Consensus 76 ~~l~~l~k~~~~Iv~YCtgG---------~R~e~aa~~L~~~Gf~nV~~L~GGi~~w~~~g~ 128 (247)
..+. ..++ ++||+||.+| .++..++..|++.|| +|+.|+||+.+|.....
T Consensus 86 ~~~~-~~~~-~~IVvyc~~g~~~~~~~~~~~s~~a~~~L~~~G~-~v~~L~GG~~~W~~~~p 144 (158)
T 3tg1_B 86 DSFK-RIFS-KEIIVYDENTNEPSRVMPSQPLHIVLESLKREGK-EPLVLKGGLSSFKQNHE 144 (158)
T ss_dssp CSST-TTTT-SCEEEECSCCSCTTSCCSSSHHHHHHHHHHTTTC-CEEEETTHHHHHTSSCG
T ss_pred HHHh-ccCC-CeEEEEECCCCcccccCcchHHHHHHHHHHhCCC-cEEEeCCcHHHHHHHhh
Confidence 0111 1123 4799999999 458899999999999 69999999999987654
No 46
>3f4a_A Uncharacterized protein YGR203W; protein phosphatase, rhodanese-like family, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.80A {Saccharomyces cerevisiae} PDB: 3fs5_A*
Probab=99.67 E-value=1.2e-17 Score=137.81 Aligned_cols=117 Identities=20% Similarity=0.269 Sum_probs=79.1
Q ss_pred CCCCHHHHHHHhhcCCchhhhhcccCCCCeEEEEcCCchhhhcccCCCcccCCccccccccCCcchhhhhccCCccCCC-
Q 025834 4 IPLAPSEWRNKLEAGKDIDKASNSDLNRDFILLDVRNGYEWDIGHFHGARRPDVDCFRSTSFGLSQREAFASDPLADLD- 82 (247)
Q Consensus 4 ~~Lsp~e~~~~l~~~~~~~l~~~~~~~~~~vvIDvRn~~E~~~GhipGAi~i~~~~~~~~~~~~~~~~~~~~~~l~~l~- 82 (247)
+.|+|+++.+++.+.... ...++++|||||+ .||..||||||+|+|...|.+.. ....++.....-..++
T Consensus 31 ~~Is~~eL~~~l~~~~~~------~~~~~~~iIDVR~-~Ey~~GHIpGAiniP~~~l~~~~--~~l~~l~~~~~~~~~~~ 101 (169)
T 3f4a_A 31 KYLDPTELHRWMQEGHTT------TLREPFQVVDVRG-SDYMGGHIKDGWHYAYSRLKQDP--EYLRELKHRLLEKQADG 101 (169)
T ss_dssp EEECHHHHHHHHHHTSCT------TTCCCEEEEECCS-TTCTTCEETTCEECCHHHHHHCH--HHHHHHHHHHHHHHHTS
T ss_pred cEeCHHHHHHHHhcCCcc------CcCCCEEEEECCc-hHHccCcCCCCEECCHHHhhccc--ccHHHHHHHHHhhcccc
Confidence 458889998888752100 0114699999999 99999999999999998764310 0001111000000011
Q ss_pred CCCceEEEEeCCC-chHHHHHHHHHH----cC--CCcEEEccchHHHHHHCcCC
Q 025834 83 KEKTDILMYCTGG-IRCDVYSTILRQ----RG--FHNLYTLKGGVSHYLENEGP 129 (247)
Q Consensus 83 k~~~~Iv~YCtgG-~R~e~aa~~L~~----~G--f~nV~~L~GGi~~w~~~g~~ 129 (247)
.+.++||+||.+| .|+..++.+|.+ .| |.+|++|+|||.+|.+++++
T Consensus 102 ~~~~~IVvyC~sG~~Rs~~aa~~l~~~L~~~G~~~~~V~~L~GG~~aW~~~~~~ 155 (169)
T 3f4a_A 102 RGALNVIFHCMLSQQRGPSAAMLLLRSLDTAELSRCRLWVLRGGFSRWQSVYGD 155 (169)
T ss_dssp SSCEEEEEECSSSSSHHHHHHHHHHHTCCHHHHTTEEEEEETTHHHHHHHHHTT
T ss_pred cCCCeEEEEeCCCCCcHHHHHHHHHHHHHHcCCCCCCEEEECCCHHHHHHHcCC
Confidence 1124899999986 899988877754 36 67999999999999998776
No 47
>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A
Probab=99.66 E-value=1.2e-16 Score=143.90 Aligned_cols=95 Identities=19% Similarity=0.180 Sum_probs=74.5
Q ss_pred EEEEcCCchhhhc----------------ccCCCcccCCccccccc-cCCcchhhhhccCCccCCCCCCceEEEEeCCCc
Q 025834 34 ILLDVRNGYEWDI----------------GHFHGARRPDVDCFRST-SFGLSQREAFASDPLADLDKEKTDILMYCTGGI 96 (247)
Q Consensus 34 vvIDvRn~~E~~~----------------GhipGAi~i~~~~~~~~-~~~~~~~~~~~~~~l~~l~k~~~~Iv~YCtgG~ 96 (247)
+|||||++.||.. ||||||+|+|+..+.+. ..+...+++.. .+..+++++ +||+||.+|.
T Consensus 194 ~liDvR~~~e~~~~~~~~~~~~~~~~~~~GhIpGA~niP~~~~~~~~g~~~~~~~l~~--~~~~l~~~~-~ivvyC~sG~ 270 (318)
T 3hzu_A 194 PLIDVRSPEEYTGKRTHMPDYPEEGALRAGHIPTAVHIPWGKAADESGRFRSREELER--LYDFINPDD-QTVVYCRIGE 270 (318)
T ss_dssp CEEECSCHHHHHTSCSSCTTSCSCSCSSCSBCTTCEECCGGGGBCTTSCBCCHHHHHH--HTTTCCTTC-CCEEECSSSH
T ss_pred eEEecCCHHHhcccccCccccccccCCcCcCCCCeeecCHHHhcCCCCcCCCHHHHHH--HhcCCCCCC-cEEEEcCChH
Confidence 8999999999998 99999999999765321 11122222221 124566665 7999999999
Q ss_pred hHHHHHHHHHH-cCCCcEEEccchHHHHHH-CcCCce
Q 025834 97 RCDVYSTILRQ-RGFHNLYTLKGGVSHYLE-NEGPVE 131 (247)
Q Consensus 97 R~e~aa~~L~~-~Gf~nV~~L~GGi~~w~~-~g~~~~ 131 (247)
|+..++..|++ .||++|+.|+|||.+|.. .+.|+.
T Consensus 271 rs~~a~~~L~~~~G~~~v~~~~GG~~~W~~~~g~Pv~ 307 (318)
T 3hzu_A 271 RSSHTWFVLTHLLGKADVRNYDGSWTEWGNAVRVPIV 307 (318)
T ss_dssp HHHHHHHHHHHTSCCSSCEECTTHHHHHTTSTTCCCB
T ss_pred HHHHHHHHHHHHcCCCCeeEeCCcHHHHhcCCCCCcc
Confidence 99999999997 999999999999999995 577764
No 48
>3aay_A Putative thiosulfate sulfurtransferase; sulfurtranserase, structural genomics, PSI, structure initiative; 1.90A {Mycobacterium tuberculosis} PDB: 3aax_A 3hwi_A
Probab=99.65 E-value=9.7e-17 Score=140.76 Aligned_cols=96 Identities=28% Similarity=0.319 Sum_probs=71.7
Q ss_pred EEEcCCchhhhc----------------ccCCCcccCCccccccccC-CcchhhhhccCCccCCCCCCceEEEEeCCCch
Q 025834 35 LLDVRNGYEWDI----------------GHFHGARRPDVDCFRSTSF-GLSQREAFASDPLADLDKEKTDILMYCTGGIR 97 (247)
Q Consensus 35 vIDvRn~~E~~~----------------GhipGAi~i~~~~~~~~~~-~~~~~~~~~~~~l~~l~k~~~~Iv~YCtgG~R 97 (247)
|||||++.||.. ||||||+|+|+..+.+... ....+++........+++++ +||+||.+|.|
T Consensus 160 liDvR~~~e~~~~~~~~~~~~~~~~~~~ghIpgA~~ip~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~iv~yC~~G~r 238 (277)
T 3aay_A 160 LIDVRSPDEFSGKILAPAHLPQEQSQRPGHIPGAINVPWSRAANEDGTFKSDEELAKLYADAGLDNSK-ETIAYCRIGER 238 (277)
T ss_dssp EEECSCHHHHHTSCCC-----CCCCSCCSBCTTCEECCGGGGBCTTSCBCCHHHHHHHHHHHTCCTTS-CEEEECSSHHH
T ss_pred EEEeCChHHeeeeecccccccccccccCCcCCCceecCHHHhcCCCCcCCCHHHHHHHHHHcCCCCCC-CEEEEcCcHHH
Confidence 999999999985 9999999999876532111 11111221110001355654 79999999999
Q ss_pred HHHHHHHHHH-cCCCcEEEccchHHHHHH-CcCCce
Q 025834 98 CDVYSTILRQ-RGFHNLYTLKGGVSHYLE-NEGPVE 131 (247)
Q Consensus 98 ~e~aa~~L~~-~Gf~nV~~L~GGi~~w~~-~g~~~~ 131 (247)
+..++..|++ +||++|++|+||+.+|.. .+.|+.
T Consensus 239 s~~a~~~L~~~~G~~~v~~l~GG~~~W~~~~g~pv~ 274 (277)
T 3aay_A 239 SSHTWFVLRELLGHQNVKNYDGSWTEYGSLVGAPIE 274 (277)
T ss_dssp HHHHHHHHHTTSCCSCEEEESSHHHHHTTSTTCCCB
T ss_pred HHHHHHHHHHHcCCCcceeeCchHHHHhcCCCCCCc
Confidence 9999999986 999999999999999998 788864
No 49
>2eg4_A Probable thiosulfate sulfurtransferase; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.70A {Thermus thermophilus} PDB: 2eg3_A
Probab=99.63 E-value=5e-16 Score=133.03 Aligned_cols=89 Identities=26% Similarity=0.429 Sum_probs=73.3
Q ss_pred CeEEEEcCCchhhhc----------ccCCCcccCCccccccccCCcchhhhhccCCccCCCCCCceEEEEeCCCchHHHH
Q 025834 32 DFILLDVRNGYEWDI----------GHFHGARRPDVDCFRSTSFGLSQREAFASDPLADLDKEKTDILMYCTGGIRCDVY 101 (247)
Q Consensus 32 ~~vvIDvRn~~E~~~----------GhipGAi~i~~~~~~~~~~~~~~~~~~~~~~l~~l~k~~~~Iv~YCtgG~R~e~a 101 (247)
+.+|||+|++.||.. ||||||+|+|...+.+.. ++.. ...+++++ +||+||.+|.|+..+
T Consensus 131 ~~~liDvR~~~e~~~~~~~~~~~~~ghIpgA~~ip~~~~~~~~------e~~~---~~~~~~~~-~iv~~C~~G~rs~~a 200 (230)
T 2eg4_A 131 HPLLLDVRSPEEFQGKVHPPCCPRGGRIPGSKNAPLELFLSPE------GLLE---RLGLQPGQ-EVGVYCHSGARSAVA 200 (230)
T ss_dssp CSCEEECSCHHHHTTSCCCTTSSSCCBCTTCEECCGGGGGCCT------THHH---HHTCCTTC-EEEEECSSSHHHHHH
T ss_pred CCeEEeCCCHHHcCcccCCCCCccCCCCCCcEEcCHHHhCChH------HHHH---hcCCCCCC-CEEEEcCChHHHHHH
Confidence 678999999999998 999999999998764311 0100 01345654 799999999999999
Q ss_pred HHHHHHcCCCcEEEccchHHHHHHCcCCce
Q 025834 102 STILRQRGFHNLYTLKGGVSHYLENEGPVE 131 (247)
Q Consensus 102 a~~L~~~Gf~nV~~L~GGi~~w~~~g~~~~ 131 (247)
+..|+++| .+|+.|+||+.+|...+.|+.
T Consensus 201 ~~~L~~~G-~~v~~~~Gg~~~W~~~g~p~~ 229 (230)
T 2eg4_A 201 FFVLRSLG-VRARNYLGSMHEWLQEGLPTE 229 (230)
T ss_dssp HHHHHHTT-CEEEECSSHHHHHHHTTCCCB
T ss_pred HHHHHHcC-CCcEEecCcHHHHhhcCCCCC
Confidence 99999999 999999999999999988753
No 50
>1okg_A Possible 3-mercaptopyruvate sulfurtransferase; rhodanese, prolyl isomerase, catalytic triad, serine protease, leishmania pyruvate; HET: CSR; 2.10A {Leishmania major} SCOP: c.46.1.2 c.46.1.2 d.26.1.3
Probab=99.63 E-value=1.4e-16 Score=146.63 Aligned_cols=97 Identities=21% Similarity=0.246 Sum_probs=71.5
Q ss_pred eEEEEcCC--------chhhhcccCCCcccCCccc-cccc------cCCcch-hhhhccCCccCCCCCCceEEEEe-CCC
Q 025834 33 FILLDVRN--------GYEWDIGHFHGARRPDVDC-FRST------SFGLSQ-REAFASDPLADLDKEKTDILMYC-TGG 95 (247)
Q Consensus 33 ~vvIDvRn--------~~E~~~GhipGAi~i~~~~-~~~~------~~~~~~-~~~~~~~~l~~l~k~~~~Iv~YC-tgG 95 (247)
++|||||+ +.||..||||||+|+|... |.+. +..... ..+........+++++ +||+|| .+|
T Consensus 28 ~~iIDvR~~~~~~~~~~~ey~~gHIpGAi~ip~~~~l~~~~~~~~~~~~lp~~~~f~~~l~~~gi~~d~-~VVvYc~~~G 106 (373)
T 1okg_A 28 YRIVDCRYSLKIKDHGSIQYAKEHVKSAIRADVDTNLSKLVPTSTARHPLPPXAEFIDWCMANGMAGEL-PVLCYDDECG 106 (373)
T ss_dssp SEEEECCCCSSSTTTTTTHHHHCEETTCEECCTTTTSCCCCTTCCCSSCCCCHHHHHHHHHHTTCSSSS-CEEEECSSTT
T ss_pred cEEEEecCCccccccchhHHhhCcCCCCEEeCchhhhhcccccCCccccCCCHHHHHHHHHHcCCCCCC-eEEEEeCCCC
Confidence 79999998 5899999999999999985 6432 111110 1111000012355654 799999 778
Q ss_pred chHH-HHHHHHHHcCCCcEEEccchHHHHHHCcCCce
Q 025834 96 IRCD-VYSTILRQRGFHNLYTLKGGVSHYLENEGPVE 131 (247)
Q Consensus 96 ~R~e-~aa~~L~~~Gf~nV~~L~GGi~~w~~~g~~~~ 131 (247)
.|+. ++++.|+.+|| +|++|+||+.+|.++++|+.
T Consensus 107 ~rsa~ra~~~L~~~G~-~V~~L~GG~~aW~~~g~pv~ 142 (373)
T 1okg_A 107 AMGGCRLWWMLNSLGA-DAYVINGGFQACKAAGLEME 142 (373)
T ss_dssp TTTHHHHHHHHHHHTC-CEEEETTTTHHHHTTTCCEE
T ss_pred chHHHHHHHHHHHcCC-eEEEeCCCHHHHHhhcCCcc
Confidence 8886 99999999999 99999999999999887753
No 51
>2wlr_A Putative thiosulfate sulfurtransferase YNJE; rhodanese domains; HET: EPE; 1.45A {Escherichia coli} PDB: 2wlx_A* 3ipo_A* 3ipp_A
Probab=99.63 E-value=4.3e-16 Score=145.10 Aligned_cols=100 Identities=23% Similarity=0.318 Sum_probs=74.3
Q ss_pred CCeEEEEcCCchhh-----------hcccCCCcccCCcc-------cccc-ccCCcchhhhhccCCccCCCCCCceEEEE
Q 025834 31 RDFILLDVRNGYEW-----------DIGHFHGARRPDVD-------CFRS-TSFGLSQREAFASDPLADLDKEKTDILMY 91 (247)
Q Consensus 31 ~~~vvIDvRn~~E~-----------~~GhipGAi~i~~~-------~~~~-~~~~~~~~~~~~~~~l~~l~k~~~~Iv~Y 91 (247)
++.+|||||++.|| ..||||||+|+|.. .+.+ ...+...+++........+++++ +||+|
T Consensus 286 ~~~~liDvR~~~e~~G~~~~~~~~~~~GhIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~ivvy 364 (423)
T 2wlr_A 286 QDASLVSIRSWPEFIGTTSGYSYIKPKGEIAGARWGHAGSDSTHMEDFHNPDGTMRSADDITAMWKAWNIKPEQ-QVSFY 364 (423)
T ss_dssp SSEEEEECSCHHHHHTSCCSSTTCCCCSEETTCEECCCCSSTTCCGGGBCTTSSBCCHHHHHHHHHTTTCCTTS-EEEEE
T ss_pred CCceEEecCchhheeeeccCCCCCCcCCCCCCccccccccccccHHHHcCCCCcCCCHHHHHHHHHHcCCCCCC-cEEEE
Confidence 57899999999999 89999999999875 1111 00111111221110012355654 89999
Q ss_pred eCCCchHHHHHHHHHHcCCCcEEEccchHHHHHH-CcCCce
Q 025834 92 CTGGIRCDVYSTILRQRGFHNLYTLKGGVSHYLE-NEGPVE 131 (247)
Q Consensus 92 CtgG~R~e~aa~~L~~~Gf~nV~~L~GGi~~w~~-~g~~~~ 131 (247)
|.+|.|+..++..|+.+||++|+.|+||+.+|.. .+.|+.
T Consensus 365 C~sG~rs~~aa~~L~~~G~~~v~~~~GG~~~W~~~~~~Pv~ 405 (423)
T 2wlr_A 365 CGTGWRASETFMYARAMGWKNVSVYDGGWYEWSSDPKNPVA 405 (423)
T ss_dssp CSSSHHHHHHHHHHHHTTCSSEEEESSHHHHHTTSTTSCEE
T ss_pred CCcHHHHHHHHHHHHHcCCCCcceeCccHHHHhcCCCCCcc
Confidence 9999999999999999999999999999999998 777754
No 52
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=99.63 E-value=6.3e-16 Score=147.59 Aligned_cols=91 Identities=30% Similarity=0.381 Sum_probs=75.7
Q ss_pred CCchhhhhcccCCCCeEEEEcCCchhhhcccCCCcccCCccccccccCCcchhhhhccCCccCCCCCCceEEEEeCCCch
Q 025834 18 GKDIDKASNSDLNRDFILLDVRNGYEWDIGHFHGARRPDVDCFRSTSFGLSQREAFASDPLADLDKEKTDILMYCTGGIR 97 (247)
Q Consensus 18 ~~~~~l~~~~~~~~~~vvIDvRn~~E~~~GhipGAi~i~~~~~~~~~~~~~~~~~~~~~~l~~l~k~~~~Iv~YCtgG~R 97 (247)
++..++.+. +++.+|||||++.||+.||||||+|+|.+.|.+ .+..+++++ +||+||.+|.|
T Consensus 475 i~~~~~~~~---~~~~~~iDvR~~~e~~~~~i~ga~~ip~~~l~~--------------~~~~~~~~~-~iv~~c~~g~r 536 (565)
T 3ntd_A 475 IHFDQIDNL---SEDQLLLDVRNPGELQNGGLEGAVNIPVDELRD--------------RMHELPKDK-EIIIFSQVGLR 536 (565)
T ss_dssp ECTTTTTSC---CTTEEEEECSCGGGGGGCCCTTCEECCGGGTTT--------------SGGGSCTTS-EEEEECSSSHH
T ss_pred eeHHHHHhC---CCCcEEEEeCCHHHHhcCCCCCcEECCHHHHHH--------------HHhhcCCcC-eEEEEeCCchH
Confidence 344444443 578999999999999999999999999977642 123356654 79999999999
Q ss_pred HHHHHHHHHHcCCCcEEEccchHHHHHHCc
Q 025834 98 CDVYSTILRQRGFHNLYTLKGGVSHYLENE 127 (247)
Q Consensus 98 ~e~aa~~L~~~Gf~nV~~L~GGi~~w~~~g 127 (247)
|..++++|++.|| +|+.|+||+.+|..++
T Consensus 537 s~~a~~~l~~~G~-~v~~l~gG~~~w~~~g 565 (565)
T 3ntd_A 537 GNVAYRQLVNNGY-RARNLIGGYRTYKFAS 565 (565)
T ss_dssp HHHHHHHHHHTTC-CEEEETTHHHHHHHTC
T ss_pred HHHHHHHHHHcCC-CEEEEcChHHHHHhCc
Confidence 9999999999999 9999999999998764
No 53
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=99.62 E-value=3.5e-16 Score=150.54 Aligned_cols=81 Identities=27% Similarity=0.436 Sum_probs=70.3
Q ss_pred CCeEEEEcCCchhhhcccCCCcccCCccccccccCCcchhhhhccCCccCCCCCCceEEEEeCCCchHHHHHHHHHHcCC
Q 025834 31 RDFILLDVRNGYEWDIGHFHGARRPDVDCFRSTSFGLSQREAFASDPLADLDKEKTDILMYCTGGIRCDVYSTILRQRGF 110 (247)
Q Consensus 31 ~~~vvIDvRn~~E~~~GhipGAi~i~~~~~~~~~~~~~~~~~~~~~~l~~l~k~~~~Iv~YCtgG~R~e~aa~~L~~~Gf 110 (247)
++.+|||||++.||+.||||||+|+|.+.+.+ .+..+++++ +||+||.+|.|+..++++|++.||
T Consensus 502 ~~~~~iDvR~~~e~~~ghi~ga~~ip~~~l~~--------------~~~~l~~~~-~iv~~C~~g~rs~~a~~~l~~~G~ 566 (588)
T 3ics_A 502 NGGYLIDVREPNELKQGMIKGSINIPLDELRD--------------RLEEVPVDK-DIYITCQLGMRGYVAARMLMEKGY 566 (588)
T ss_dssp TTCEEEECSCGGGGGGCBCTTEEECCHHHHTT--------------CGGGSCSSS-CEEEECSSSHHHHHHHHHHHHTTC
T ss_pred CCCEEEEcCCHHHHhcCCCCCCEECCHHHHHH--------------HHhhCCCCC-eEEEECCCCcHHHHHHHHHHHcCC
Confidence 46899999999999999999999999876642 123355654 799999999999999999999999
Q ss_pred CcEEEccchHHHHHHCc
Q 025834 111 HNLYTLKGGVSHYLENE 127 (247)
Q Consensus 111 ~nV~~L~GGi~~w~~~g 127 (247)
+ |+.|+||+.+|.+..
T Consensus 567 ~-v~~l~GG~~~w~~~~ 582 (588)
T 3ics_A 567 K-VKNVDGGFKLYGTVL 582 (588)
T ss_dssp C-EEEETTHHHHHHHHC
T ss_pred c-EEEEcchHHHHHhhh
Confidence 8 999999999998754
No 54
>2wlr_A Putative thiosulfate sulfurtransferase YNJE; rhodanese domains; HET: EPE; 1.45A {Escherichia coli} PDB: 2wlx_A* 3ipo_A* 3ipp_A
Probab=99.62 E-value=4.1e-16 Score=145.18 Aligned_cols=121 Identities=17% Similarity=0.198 Sum_probs=85.5
Q ss_pred CCCHHHHHHHhhcCCchhhhhcccCCCCeEEEEcC--CchhhhcccCCCcccCCcccccccc--CCcchhhhhccCCccC
Q 025834 5 PLAPSEWRNKLEAGKDIDKASNSDLNRDFILLDVR--NGYEWDIGHFHGARRPDVDCFRSTS--FGLSQREAFASDPLAD 80 (247)
Q Consensus 5 ~Lsp~e~~~~l~~~~~~~l~~~~~~~~~~vvIDvR--n~~E~~~GhipGAi~i~~~~~~~~~--~~~~~~~~~~~~~l~~ 80 (247)
.++++++.+++........ .+++++|||+| ++.||..||||||+|+|+..+.+.+ .....+++.......+
T Consensus 125 ~i~~~~l~~~~~~~~~~~~-----~~~~~~liDvR~~~~~e~~~ghIpgA~nip~~~~~~~~~~~~~~~~~l~~~~~~~g 199 (423)
T 2wlr_A 125 LVYPQWLHDLQQGKEVTAK-----PAGDWKVIEAAWGAPKLYLISHIPGADYIDTNEVESEPLWNKVSDEQLKAMLAKHG 199 (423)
T ss_dssp EECHHHHHHHHTTCCCTTC-----CSSCEEEEEEESSSCSHHHHCBCTTCEEEEGGGTEETTTTEECCHHHHHHHHHHTT
T ss_pred ccCHHHHHHHhhccccccc-----cCCCeEEEEecCCCchhhccCcCCCcEEcCHHHhccCCCCCCCCHHHHHHHHHHcC
Confidence 3566666666653211100 13578999999 9999999999999999998774311 1111122111111123
Q ss_pred CCCCCceEEEEeCCCchHHHHHHHHHHcCCCcEEEccchHHHHHHCcCCce
Q 025834 81 LDKEKTDILMYCTGGIRCDVYSTILRQRGFHNLYTLKGGVSHYLENEGPVE 131 (247)
Q Consensus 81 l~k~~~~Iv~YCtgG~R~e~aa~~L~~~Gf~nV~~L~GGi~~w~~~g~~~~ 131 (247)
+++++ +||+||.+|.|+..++..|+..||++|+.|+||+.+|...+.|+.
T Consensus 200 i~~~~-~ivvyC~~G~~a~~~~~~L~~~G~~~v~~l~Gg~~~W~~~g~pv~ 249 (423)
T 2wlr_A 200 IRHDT-TVILYGRDVYAAARVAQIMLYAGVKDVRLLDGGWQTWSDAGLPVE 249 (423)
T ss_dssp CCTTS-EEEEECSSHHHHHHHHHHHHHHTCSCEEEETTTHHHHHHTTCCCB
T ss_pred CCCCC-eEEEECCCchHHHHHHHHHHHcCCCCeEEECCCHHHHhhCCCCcc
Confidence 55654 799999999999999999999999999999999999998776643
No 55
>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2
Probab=99.61 E-value=3.6e-16 Score=149.94 Aligned_cols=101 Identities=16% Similarity=0.219 Sum_probs=84.1
Q ss_pred CCCCHHHHHHHhhcCCchhhhhcccCCCCeEEEEcCCchhhhcccCCCcccCCccccccccCCcchhhhhccCCccCCCC
Q 025834 4 IPLAPSEWRNKLEAGKDIDKASNSDLNRDFILLDVRNGYEWDIGHFHGARRPDVDCFRSTSFGLSQREAFASDPLADLDK 83 (247)
Q Consensus 4 ~~Lsp~e~~~~l~~~~~~~l~~~~~~~~~~vvIDvRn~~E~~~GhipGAi~i~~~~~~~~~~~~~~~~~~~~~~l~~l~k 83 (247)
..++++++.+++.+ ++++|||||++.||..||||||+|+|...|.+. +..+++
T Consensus 377 ~~i~~~~l~~~l~~-------------~~~~liDvR~~~e~~~ghIpgA~~ip~~~l~~~--------------l~~l~~ 429 (539)
T 1yt8_A 377 DTIDPTTLADWLGE-------------PGTRVLDFTASANYAKRHIPGAAWVLRSQLKQA--------------LERLGT 429 (539)
T ss_dssp CEECHHHHHHHTTS-------------TTEEEEECSCHHHHHHCBCTTCEECCGGGHHHH--------------HHHHCC
T ss_pred CccCHHHHHHHhcC-------------CCeEEEEeCCHHHhhcCcCCCchhCCHHHHHHH--------------HHhCCC
Confidence 34567777766654 578999999999999999999999998766421 112455
Q ss_pred CCceEEEEeCCCchHHHHHHHHHHcCCCcEEEccchHHHHHHCcCCcee
Q 025834 84 EKTDILMYCTGGIRCDVYSTILRQRGFHNLYTLKGGVSHYLENEGPVEW 132 (247)
Q Consensus 84 ~~~~Iv~YCtgG~R~e~aa~~L~~~Gf~nV~~L~GGi~~w~~~g~~~~~ 132 (247)
++ +||+||.+|.|+..++..|+.+||++|+.|+||+.+|.++++|+..
T Consensus 430 ~~-~ivv~C~sG~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~pv~~ 477 (539)
T 1yt8_A 430 AE-RYVLTCGSSLLARFAVAEVQALSGKPVFLLDGGTSAWVAAGLPTED 477 (539)
T ss_dssp CS-EEEEECSSSHHHHHHHHHHHHHHCSCEEEETTHHHHHHHTTCCCBC
T ss_pred CC-eEEEEeCCChHHHHHHHHHHHcCCCCEEEeCCcHHHHHhCCCCccc
Confidence 54 8999999999999999999999999999999999999999998653
No 56
>1okg_A Possible 3-mercaptopyruvate sulfurtransferase; rhodanese, prolyl isomerase, catalytic triad, serine protease, leishmania pyruvate; HET: CSR; 2.10A {Leishmania major} SCOP: c.46.1.2 c.46.1.2 d.26.1.3
Probab=99.52 E-value=4.3e-15 Score=136.61 Aligned_cols=101 Identities=18% Similarity=0.240 Sum_probs=73.2
Q ss_pred CCCeEEEEcCCchhhh-----------cccCCCcccCCccccc--ccc-C-Ccchhhhhc--cCCccCCCC---CCceEE
Q 025834 30 NRDFILLDVRNGYEWD-----------IGHFHGARRPDVDCFR--STS-F-GLSQREAFA--SDPLADLDK---EKTDIL 89 (247)
Q Consensus 30 ~~~~vvIDvRn~~E~~-----------~GhipGAi~i~~~~~~--~~~-~-~~~~~~~~~--~~~l~~l~k---~~~~Iv 89 (247)
.++.+|||||++.||. .||||||+|+|+..+. +.. . +...+++.. ...+.++++ ++ +||
T Consensus 172 ~~~~~lIDvR~~~Ef~G~~~~~~~~~~~GhIpGAiniP~~~l~~~~~~~~~~~~~~~l~~~~~~~~~gi~~~~~d~-~iv 250 (373)
T 1okg_A 172 PPQAIITDARSADRFASTVRPYAADKMPGHIEGARNLPYTSHLVTRGDGKVLRSEEEIRHNIMTVVQGAGDAADLS-SFV 250 (373)
T ss_dssp CTTCCEEECSCHHHHTCCSSCCTTCSSSSCSTTCEECCGGGGEECCSSSCEECCHHHHHHHHHTTCC-----CCCT-TSE
T ss_pred ccCceEEeCCCHHHccccccccccCCcCccCCCcEEecHHHhhccCCCCCccCCHHHHHHHHHhhhcCCCcccCCC-CEE
Confidence 3567899999999999 9999999999998764 210 0 111112211 000002355 54 799
Q ss_pred EEeCCCchHHHHHHHHHHcCCCcEEEccchHHHHHH-CcCCce
Q 025834 90 MYCTGGIRCDVYSTILRQRGFHNLYTLKGGVSHYLE-NEGPVE 131 (247)
Q Consensus 90 ~YCtgG~R~e~aa~~L~~~Gf~nV~~L~GGi~~w~~-~g~~~~ 131 (247)
+||.+|.|+..++..|+.+||++|+.|+|||..|.. .+.|+.
T Consensus 251 vyC~sG~rs~~a~~~L~~~G~~~v~~~~GG~~~W~~~~~~pv~ 293 (373)
T 1okg_A 251 FSCGSGVTACINIALVHHLGLGHPYLYCGSWSEYSGLFRPPIM 293 (373)
T ss_dssp EECSSSSTHHHHHHHHHHTTSCCCEECSSHHHHHHHHTHHHHH
T ss_pred EECCchHHHHHHHHHHHHcCCCCeeEeCChHHHHhcCCCCCcc
Confidence 999999999999999999999999999999999987 566643
No 57
>2gwf_A Ubiquitin carboxyl-terminal hydrolase 8; protein-protein complex, E3 ligase, protein ubiquitination, hydrolase, protease, UBL conjugation pathway; 2.30A {Homo sapiens} SCOP: c.46.1.4
Probab=99.52 E-value=6.4e-15 Score=119.71 Aligned_cols=111 Identities=13% Similarity=0.085 Sum_probs=71.2
Q ss_pred CCCCHHHHHHHhhcCCchhhhhcccCCCCeEEEEcCCchhhhcccCCCcccCCccccccccCCcchhhhhcc------CC
Q 025834 4 IPLAPSEWRNKLEAGKDIDKASNSDLNRDFILLDVRNGYEWDIGHFHGARRPDVDCFRSTSFGLSQREAFAS------DP 77 (247)
Q Consensus 4 ~~Lsp~e~~~~l~~~~~~~l~~~~~~~~~~vvIDvRn~~E~~~GhipGAi~i~~~~~~~~~~~~~~~~~~~~------~~ 77 (247)
..|+|+++.++++.. ..+++|||||++.||+.||||||+|+|...+.... ....+... ..
T Consensus 20 ~~is~~~l~~~l~~~-----------~~~~~liDvR~~~ey~~gHI~gAinip~~~l~~~~---~~~~l~~~lp~~~~~l 85 (157)
T 2gwf_A 20 GAITAKELYTMMTDK-----------NISLIIMDARRMQDYQDSCILHSLSVPEEAISPGV---TASWIEAHLPDDSKDT 85 (157)
T ss_dssp CEECHHHHHHHHHST-----------TSCEEEEECSCHHHHHHSCBTTCEECCGGGCCTTC---CHHHHHHTSCHHHHHH
T ss_pred CccCHHHHHHHHhcC-----------CCCeEEEECCCHHHHHhcCccCCcccCHHHcCCCC---cHHHHHHHcCHHHHHH
Confidence 457888888877641 13799999999999999999999999988664210 00000000 00
Q ss_pred ccCCCCCCceEEEEeCCCch----HHHHHHHHH----Hc----CCCc-EEEccchHHHHHHCcCCc
Q 025834 78 LADLDKEKTDILMYCTGGIR----CDVYSTILR----QR----GFHN-LYTLKGGVSHYLENEGPV 130 (247)
Q Consensus 78 l~~l~k~~~~Iv~YCtgG~R----~e~aa~~L~----~~----Gf~n-V~~L~GGi~~w~~~g~~~ 130 (247)
+....+ ...||+||.+|.+ +..+++.|. +. |+.+ |+.|+||+.+|.+. +|.
T Consensus 86 ~~~~~~-~~~VVvy~~~~~~~~~~a~~~l~~L~~~L~~~~~~~~~~~~V~~L~GG~~aW~~~-~p~ 149 (157)
T 2gwf_A 86 WKKRGN-VEYVVLLDWFSSAKDLQIGTTLRSLKDALFKWESKTVLRNEPLVLEGGYENWLLC-YPQ 149 (157)
T ss_dssp HHTTTT-SSEEEEECSSCCGGGCCTTCHHHHHHHHHHTSCCSSCCSSCCEEETTHHHHHHHH-CGG
T ss_pred HHhcCC-CCEEEEEcCCCCccccCcccHHHHHHHHHHhhccccccCCceEEEccHHHHHHHH-Chh
Confidence 011112 2259999988754 334455544 22 4544 99999999999974 553
No 58
>1whb_A KIAA0055; deubiqutinating enzyme, UBPY, structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; NMR {Homo sapiens} SCOP: c.46.1.4
Probab=99.52 E-value=1e-14 Score=118.26 Aligned_cols=111 Identities=12% Similarity=0.074 Sum_probs=72.5
Q ss_pred CCCCHHHHHHHhhcCCchhhhhcccCCCCeEEEEcCCchhhhcccCCCcccCCccccccccCCcchhhhhc--cCC----
Q 025834 4 IPLAPSEWRNKLEAGKDIDKASNSDLNRDFILLDVRNGYEWDIGHFHGARRPDVDCFRSTSFGLSQREAFA--SDP---- 77 (247)
Q Consensus 4 ~~Lsp~e~~~~l~~~~~~~l~~~~~~~~~~vvIDvRn~~E~~~GhipGAi~i~~~~~~~~~~~~~~~~~~~--~~~---- 77 (247)
..|+++++.++++.. ..+++|||||++.||+.||||||+|+|...+.... ....+.. ...
T Consensus 15 ~~i~~~~l~~~l~~~-----------~~~~~liDvR~~~ey~~gHI~gainip~~~~~~~~---~~~~l~~~lp~~~~~~ 80 (157)
T 1whb_A 15 GAITAKELYTMMTDK-----------NISLIIMDARRMQDYQDSCILHSLSVPEEAISPGV---TASWIEAHLPDDSKDT 80 (157)
T ss_dssp SEECHHHHHHHHTCS-----------SSCEEEEEESCHHHHHHCCBTTCEEECSSSCCTTC---CHHHHHHSCCTTHHHH
T ss_pred CccCHHHHHHHHhcC-----------CCCeEEEECCCHHHHHhccccCCcccCHHHccCCC---cHHHHHHHCChHHHHH
Confidence 567889988888741 13799999999999999999999999987664210 0001100 000
Q ss_pred ccCCCCCCceEEEEeCCCch----HHHHHHHHHH----c----CCC-cEEEccchHHHHHHCcCCc
Q 025834 78 LADLDKEKTDILMYCTGGIR----CDVYSTILRQ----R----GFH-NLYTLKGGVSHYLENEGPV 130 (247)
Q Consensus 78 l~~l~k~~~~Iv~YCtgG~R----~e~aa~~L~~----~----Gf~-nV~~L~GGi~~w~~~g~~~ 130 (247)
+..... ...||+||.+|.+ +..+.+.|.+ . ||. +|+.|+||+.+|.+. +|.
T Consensus 81 ~~~~~~-~~~VVvy~~~~~~~~~~a~~~~~~L~~~L~~~~~~~~~~~~V~~L~GG~~aW~~~-~p~ 144 (157)
T 1whb_A 81 WKKRGN-VEYVVLLDWFSSAKDLQIGTTLRSLKDALFKWESKTVLRNEPLVLEGGYENWLLC-YPQ 144 (157)
T ss_dssp HHGGGT-SSEEEEECSSCCGGGCCTTCHHHHHHHTTTTTCSSCCCSSCCEEESSCHHHHHHH-CGG
T ss_pred HHhcCC-CCEEEEECCCCCccccccccHHHHHHHHHHHhccccccCCCeEEEcchHHHHHHH-Chh
Confidence 001111 2259999988754 3445566652 2 454 399999999999985 553
No 59
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}
Probab=99.51 E-value=1.1e-15 Score=144.10 Aligned_cols=80 Identities=28% Similarity=0.471 Sum_probs=0.0
Q ss_pred CCeEEEEcCCchhhhcccCCCcccCCccccccccCCcchhhhhccCCccCCCCCCceEEEEeCCCchHHHHHHHHHHcCC
Q 025834 31 RDFILLDVRNGYEWDIGHFHGARRPDVDCFRSTSFGLSQREAFASDPLADLDKEKTDILMYCTGGIRCDVYSTILRQRGF 110 (247)
Q Consensus 31 ~~~vvIDvRn~~E~~~GhipGAi~i~~~~~~~~~~~~~~~~~~~~~~l~~l~k~~~~Iv~YCtgG~R~e~aa~~L~~~Gf 110 (247)
++++|||||++.||+.||||||+|+|...+.+ .+..+++++ +||+||.+|.|+..++..|++.||
T Consensus 386 ~~~~liDvR~~~e~~~ghIpgA~~ip~~~l~~--------------~~~~l~~~~-~iv~~C~~G~rs~~a~~~L~~~G~ 450 (466)
T 3r2u_A 386 NESHILDVRNDNEWNNGHLSQAVHVPHGKLLE--------------TDLPFNKND-VIYVHCQSGIRSSIAIGILEHKGY 450 (466)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCcEEEEeCCHHHHhcCcCCCCEECCHHHHHH--------------HHhhCCCCC-eEEEECCCChHHHHHHHHHHHcCC
Confidence 57899999999999999999999999987642 122355654 799999999999999999999999
Q ss_pred CcEEEccchHHHHHH
Q 025834 111 HNLYTLKGGVSHYLE 125 (247)
Q Consensus 111 ~nV~~L~GGi~~w~~ 125 (247)
++|+.|+||+.+|.+
T Consensus 451 ~~v~~l~GG~~~W~~ 465 (466)
T 3r2u_A 451 HNIINVNEGYKDIQL 465 (466)
T ss_dssp ---------------
T ss_pred CCEEEecChHHHHhh
Confidence 999999999999975
No 60
>2eg4_A Probable thiosulfate sulfurtransferase; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.70A {Thermus thermophilus} PDB: 2eg3_A
Probab=99.51 E-value=8.2e-15 Score=125.42 Aligned_cols=89 Identities=20% Similarity=0.241 Sum_probs=65.2
Q ss_pred CCCeEEEEcCCchhhhcccCCCcccCCcc--ccccccC--Ccc-hhhhhccCCccCCCCCCceEEEEeCCCc-hHHHHHH
Q 025834 30 NRDFILLDVRNGYEWDIGHFHGARRPDVD--CFRSTSF--GLS-QREAFASDPLADLDKEKTDILMYCTGGI-RCDVYST 103 (247)
Q Consensus 30 ~~~~vvIDvRn~~E~~~GhipGAi~i~~~--~~~~~~~--~~~-~~~~~~~~~l~~l~k~~~~Iv~YCtgG~-R~e~aa~ 103 (247)
+++++|||+|++.||..||||||+|+|.. .+..... ... .+.+. ..+..++.+ ++||+||.+|. ++.++++
T Consensus 4 ~~~~~iiDvR~~~ey~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~-~~ivvyc~~g~~~s~~a~~ 80 (230)
T 2eg4_A 4 PEDAVLVDTRPRPAYEAGHLPGARHLDLSAPKLRLREEAELKALEGGLT--ELFQTLGLR-SPVVLYDEGLTSRLCRTAF 80 (230)
T ss_dssp CTTCEEEECSCHHHHHHCBCTTCEECCCCSCCCCCCSHHHHHHHHHHHH--HHHHHTTCC-SSEEEECSSSCHHHHHHHH
T ss_pred CCCEEEEECCChhhHhhCcCCCCEECCccchhcccCCCCCcCCCHHHHH--HHHHhcCCC-CEEEEEcCCCCccHHHHHH
Confidence 47899999999999999999999999998 4431000 000 00111 111123333 47999999998 9999999
Q ss_pred HHHHcCCCcEEEccchHHHHHH
Q 025834 104 ILRQRGFHNLYTLKGGVSHYLE 125 (247)
Q Consensus 104 ~L~~~Gf~nV~~L~GGi~~w~~ 125 (247)
.|+ .||++|++|+|| |.+
T Consensus 81 ~L~-~G~~~v~~l~GG---W~~ 98 (230)
T 2eg4_A 81 FLG-LGGLEVQLWTEG---WEP 98 (230)
T ss_dssp HHH-HTTCCEEEECSS---CGG
T ss_pred HHH-cCCceEEEeCCC---Ccc
Confidence 999 999999999999 876
No 61
>3utn_X Thiosulfate sulfurtransferase TUM1; rhodanese-like domain; 1.90A {Saccharomyces cerevisiae}
Probab=99.43 E-value=3e-13 Score=122.41 Aligned_cols=114 Identities=13% Similarity=0.173 Sum_probs=83.0
Q ss_pred CCCHHHHHHHhhcCCchhhhhcccCCCCeEEEEcC--------Cc-hhh-hcccCCCcccCCcccccccc----CCcch-
Q 025834 5 PLAPSEWRNKLEAGKDIDKASNSDLNRDFILLDVR--------NG-YEW-DIGHFHGARRPDVDCFRSTS----FGLSQ- 69 (247)
Q Consensus 5 ~Lsp~e~~~~l~~~~~~~l~~~~~~~~~~vvIDvR--------n~-~E~-~~GhipGAi~i~~~~~~~~~----~~~~~- 69 (247)
-|||++++++|.... ...+++||++ +. .|| +.||||||++++++.+.+.. ..++.
T Consensus 29 LIsp~~l~~ll~~~~----------~~rvv~lDasw~lP~~~r~~~~E~~~~~HIPGAv~~Dld~~~d~~~~~ph~LP~~ 98 (327)
T 3utn_X 29 LISPKAFVKLVASEK----------VHRIVPVDATWYLPSWKLDNKVDFLTKPRIPNSIFFDIDAISDKKSPYPHMFPTK 98 (327)
T ss_dssp EECHHHHHHHHHHCS----------SSCEEEEECCCCCGGGCCCHHHHHHHSCBCTTCEECCTTTSSCTTSSSTTCCCCH
T ss_pred ccCHHHHHHHHhCCC----------CCcEEEEEecCCCCCCCCCHHHHHHhhCcCCCCeeeChHHhcCCCCCCCCCCcCH
Confidence 489999999997521 2569999984 43 366 78999999999998765422 22221
Q ss_pred hhhhccCCccCCCCCCceEEEEeCCCc-hHHHHHHHHHHcCCCcEEEccchHHHHHHCcCCc
Q 025834 70 REAFASDPLADLDKEKTDILMYCTGGI-RCDVYSTILRQRGFHNLYTLKGGVSHYLENEGPV 130 (247)
Q Consensus 70 ~~~~~~~~l~~l~k~~~~Iv~YCtgG~-R~e~aa~~L~~~Gf~nV~~L~GGi~~w~~~g~~~ 130 (247)
+.+.......++.+++ +||+|.++|. .+.+++|.|+..|+++|++|+|| .+|.++++|+
T Consensus 99 ~~f~~~l~~lGI~~d~-~VVvYD~~~~~~AaR~wW~Lr~~Gh~~V~vLdGg-~aW~~~g~p~ 158 (327)
T 3utn_X 99 KVFDDAMSNLGVQKDD-ILVVYDRVGNFSSPRCAWTLGVMGHPKVYLLNNF-NQYREFKYPL 158 (327)
T ss_dssp HHHHHHHHHTTCCTTC-EEEEECSSSSSSHHHHHHHHHHTTCSEEEEESCH-HHHHHTTCCC
T ss_pred HHHHHHHHHcCCCCCC-EEEEEeCCCCcHHHHHHHHHHHcCCCceeecccH-HHHHHhCCCc
Confidence 2222111223466766 6999998765 58899999999999999999987 8999998775
No 62
>3utn_X Thiosulfate sulfurtransferase TUM1; rhodanese-like domain; 1.90A {Saccharomyces cerevisiae}
Probab=99.39 E-value=4.2e-13 Score=121.42 Aligned_cols=98 Identities=19% Similarity=0.289 Sum_probs=72.7
Q ss_pred CCeEEEEcCCchhhh-----------cccCCCcccCCccccccccC--Ccc-hhhhh------ccCCccCCCCCCceEEE
Q 025834 31 RDFILLDVRNGYEWD-----------IGHFHGARRPDVDCFRSTSF--GLS-QREAF------ASDPLADLDKEKTDILM 90 (247)
Q Consensus 31 ~~~vvIDvRn~~E~~-----------~GhipGAi~i~~~~~~~~~~--~~~-~~~~~------~~~~l~~l~k~~~~Iv~ 90 (247)
++++|||+|++.+|. .||||||+|+|+..+.+... ... .+.+. .......+++++ +||+
T Consensus 202 ~~~~lvDaRs~~rf~G~~~ep~~~~r~GHIPGA~nlP~~~~ld~~~~~~~~~~e~l~~~l~~~~~~~~~gid~~k-~vI~ 280 (327)
T 3utn_X 202 KKFNAFDARSLGRFEGTEPEPRSDIPSGHIPGTQPLPYGSLLDPETKTYPEAGEAIHATLEKALKDFHCTLDPSK-PTIC 280 (327)
T ss_dssp HHCEEEECSCHHHHHTSSCCSSSSCCCCBCTTEEECCGGGGSCTTTCCCCCTTHHHHHHHHHHHHHTTCCCCTTS-CEEE
T ss_pred ccceeeccCccceecccccCccccccCCCCCCCcccChhhccCCCCCCCCCcHHHHHHHHHHHHHHhhcCCCCCC-CEEE
Confidence 357899999999985 49999999999987643211 111 11110 011123466664 7999
Q ss_pred EeCCCchHHHHHHHHHHcCCCcEEEccchHHHHHHCcCC
Q 025834 91 YCTGGIRCDVYSTILRQRGFHNLYTLKGGVSHYLENEGP 129 (247)
Q Consensus 91 YCtgG~R~e~aa~~L~~~Gf~nV~~L~GGi~~w~~~g~~ 129 (247)
||.+|+++...+..|...||++|.+++|++..|.....|
T Consensus 281 yCgsGvtA~~~~laL~~lG~~~v~lYdGSWsEW~~r~~p 319 (327)
T 3utn_X 281 SCGTGVSGVIIKTALELAGVPNVRLYDGSWTEWVLKSGP 319 (327)
T ss_dssp ECSSSHHHHHHHHHHHHTTCCSEEEESSHHHHHHHHHCG
T ss_pred ECChHHHHHHHHHHHHHcCCCCceeCCCcHHHhccccCC
Confidence 999999999999999999999999999999999876554
No 63
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.39 E-value=1.6e-13 Score=129.08 Aligned_cols=111 Identities=20% Similarity=0.208 Sum_probs=81.6
Q ss_pred CCCCHHHHHHHhhcCCchhhhhcccCCCCeEEEEcCCchhhhcccCCCcccCCccc-cccccCCcchhhhhccCCccCCC
Q 025834 4 IPLAPSEWRNKLEAGKDIDKASNSDLNRDFILLDVRNGYEWDIGHFHGARRPDVDC-FRSTSFGLSQREAFASDPLADLD 82 (247)
Q Consensus 4 ~~Lsp~e~~~~l~~~~~~~l~~~~~~~~~~vvIDvRn~~E~~~GhipGAi~i~~~~-~~~~~~~~~~~~~~~~~~l~~l~ 82 (247)
+.|+|+++.+++.+ + +|||+|++.||..||||||+|+|.+. |. .+.. .+ .+
T Consensus 273 ~~is~~~l~~~l~~--------------~-~iiD~R~~~~y~~ghIpGA~~i~~~~~~~---------~~~~--~l--~~ 324 (474)
T 3tp9_A 273 VDLPPERVRAWREG--------------G-VVLDVRPADAFAKRHLAGSLNIPWNKSFV---------TWAG--WL--LP 324 (474)
T ss_dssp CCCCGGGHHHHHHT--------------S-EEEECSCHHHHHHSEETTCEECCSSTTHH---------HHHH--HH--CC
T ss_pred ceeCHHHHHHHhCC--------------C-EEEECCChHHHhccCCCCeEEECcchHHH---------HHHH--hc--CC
Confidence 34666666666652 3 99999999999999999999999863 32 1110 01 13
Q ss_pred CCCceEEEEeCCCchHHHHHHHHHHcCCCcEEEccchHHHHHHCcCCce--------------eecceeEEeeeee
Q 025834 83 KEKTDILMYCTGGIRCDVYSTILRQRGFHNLYTLKGGVSHYLENEGPVE--------------WVGNLFVFDSRLS 144 (247)
Q Consensus 83 k~~~~Iv~YCtgG~R~e~aa~~L~~~Gf~nV~~L~GGi~~w~~~g~~~~--------------~~G~~fvFD~R~~ 144 (247)
++ ++||+||.+|. +.+++++|+.+||++|+.+.+|+.+|..++.++. -.+...++|.|-.
T Consensus 325 ~~-~~vvvy~~~~~-~~~~~~~L~~~G~~~v~~~l~G~~~W~~~g~~~~~~~~i~~~~l~~~~~~~~~~lvDvR~~ 398 (474)
T 3tp9_A 325 AD-RPIHLLAADAI-APDVIRALRSIGIDDVVDWTDPAAVDRAAPDDVASYANVSPDEVRGALAQQGLWLLDVRNV 398 (474)
T ss_dssp SS-SCEEEECCTTT-HHHHHHHHHHTTCCCEEEEECGGGGTTCCGGGEECCEEECHHHHHHTTTTTCCEEEECSCH
T ss_pred CC-CeEEEEECCCc-HHHHHHHHHHcCCcceEEecCcHHHHHhcccccccccccCHHHHHHHhcCCCcEEEECCCH
Confidence 44 47999999887 5569999999999999986679999998776532 1245678898854
No 64
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}
Probab=99.07 E-value=9.2e-11 Score=110.43 Aligned_cols=102 Identities=14% Similarity=0.081 Sum_probs=59.4
Q ss_pred CCCeEEEEcCCchhhhcccCCCcccCCccc-cccccCCcchhhhhccCCccCCCCCCceEEEEeCCCchHHHHHHHHHHc
Q 025834 30 NRDFILLDVRNGYEWDIGHFHGARRPDVDC-FRSTSFGLSQREAFASDPLADLDKEKTDILMYCTGGIRCDVYSTILRQR 108 (247)
Q Consensus 30 ~~~~vvIDvRn~~E~~~GhipGAi~i~~~~-~~~~~~~~~~~~~~~~~~l~~l~k~~~~Iv~YCtgG~R~e~aa~~L~~~ 108 (247)
.++++|||+|++.||..||||||+|+|... |. .+.. . .++++ ++||+||. +.++.++++.|+.+
T Consensus 294 ~~~~~ilD~R~~~~y~~gHIpGAv~ip~~~~~~---------~~~~--~--~~~~~-~~vvly~~-~~~a~~a~~~L~~~ 358 (466)
T 3r2u_A 294 NTNRLTFDLRSKEAYHGGHIEGTINIPYDKNFI---------NQIG--W--YLNYD-QEINLIGD-YHLVSKATHTLQLI 358 (466)
T ss_dssp CCCSEEEECSCHHHHHHSCCTTCEECCSSTTHH---------HHHT--T--TCCTT-SCEEEESC-HHHHHHHHHHHHTT
T ss_pred CCCeEEEECCCHHHHhhCCCCCcEECCccHHHH---------HHHH--h--ccCCC-CeEEEEEC-CchHHHHHHHhhhh
Confidence 467899999999999999999999999863 32 1111 1 13444 47999998 55899999999999
Q ss_pred CCCcEEE-ccchHHHHHHCcCC-ceeecceeEEeeeeecC
Q 025834 109 GFHNLYT-LKGGVSHYLENEGP-VEWVGNLFVFDSRLSLP 146 (247)
Q Consensus 109 Gf~nV~~-L~GGi~~w~~~g~~-~~~~G~~fvFD~R~~~~ 146 (247)
||++|+. |+|+...|...... ..-.+...++|.|-.-.
T Consensus 359 G~~~v~~~l~g~~~~~~~~~~~~~~~~~~~~liDvR~~~e 398 (466)
T 3r2u_A 359 GYDDIAGYQLPQSKIQTRSIHSEDITGNESHILDVRNDNE 398 (466)
T ss_dssp TCCCEEEEECCC----------------------------
T ss_pred hcccccccccCcccccHHHHHHHHHhCCCcEEEEeCCHHH
Confidence 9999996 78876665533211 11235567899996543
No 65
>2f46_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.41A {Neisseria meningitidis Z2491}
Probab=97.04 E-value=0.00033 Score=55.86 Aligned_cols=86 Identities=16% Similarity=0.243 Sum_probs=48.6
Q ss_pred CCCCHHHHHHHhhcCCchhhhhcccCCCCeEEEEcCCchh------------hhcc-cCCCcccCCccccccccCCcchh
Q 025834 4 IPLAPSEWRNKLEAGKDIDKASNSDLNRDFILLDVRNGYE------------WDIG-HFHGARRPDVDCFRSTSFGLSQR 70 (247)
Q Consensus 4 ~~Lsp~e~~~~l~~~~~~~l~~~~~~~~~~vvIDvRn~~E------------~~~G-hipGAi~i~~~~~~~~~~~~~~~ 70 (247)
..++++++..+.+. .-..|||+|++.| +..+ +|+|.+++|+.... . ..+
T Consensus 28 ~~~~~~d~~~L~~~-------------Gi~~IIdlR~~~E~~~~p~~~~~~~~~~~~gi~~~~~iPv~~~~-~----~~~ 89 (156)
T 2f46_A 28 PQLTKADAEQIAQL-------------GIKTIICNRPDREEESQPDFAQIKQWLEQAGVTGFHHQPVTARD-I----QKH 89 (156)
T ss_dssp SCCCGGGHHHHHHH-------------TCCEEEECSCTTSSTTCCCHHHHHHHHGGGTCCEEEECCCCTTT-C----CHH
T ss_pred CCCCHHHHHHHHHC-------------CCCEEEECCCCccccCCCcHHHHHHHHHHCCCHhheECccCCCC-C----CHH
Confidence 34666666655443 3357999998766 2233 48888999986431 1 011
Q ss_pred hhhc-cCCccCCCCCCceEEEEeCCCchHHHHHHH-HHHcCC
Q 025834 71 EAFA-SDPLADLDKEKTDILMYCTGGIRCDVYSTI-LRQRGF 110 (247)
Q Consensus 71 ~~~~-~~~l~~l~k~~~~Iv~YCtgG~R~e~aa~~-L~~~Gf 110 (247)
.+.. ...+.. .+ +||++||..|.|+..+++. |...|.
T Consensus 90 ~~~~~~~~l~~--~~-~pVlvHC~sG~Rs~~l~al~l~~~g~ 128 (156)
T 2f46_A 90 DVETFRQLIGQ--AE-YPVLAYCRTGTRCSLLWGFRRAAEGM 128 (156)
T ss_dssp HHHHHHHHHHT--SC-SSEEEECSSSHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHh--CC-CCEEEECCCCCCHHHHHHHHHHHcCC
Confidence 1100 001111 22 4799999999998754443 344565
No 66
>1v8c_A MOAD related protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, protein binding; 1.60A {Thermus thermophilus} SCOP: d.15.3.1 d.129.5.1
Probab=93.93 E-value=0.012 Score=47.84 Aligned_cols=48 Identities=10% Similarity=-0.065 Sum_probs=37.5
Q ss_pred CCCHHHHHHHhhcCCchhhhhcccCCC---CeEEEEcCCchhhhcccCCCcccCCcccc
Q 025834 5 PLAPSEWRNKLEAGKDIDKASNSDLNR---DFILLDVRNGYEWDIGHFHGARRPDVDCF 60 (247)
Q Consensus 5 ~Lsp~e~~~~l~~~~~~~l~~~~~~~~---~~vvIDvRn~~E~~~GhipGAi~i~~~~~ 60 (247)
.+|+.+++..+.++++ +++..+. +.++||||.+.||+ |||+++|...+
T Consensus 95 ~~~~~~~~~~i~ei~~----~~~~~~~~~~~~~liDvRe~~E~~----pgA~~iprg~l 145 (168)
T 1v8c_A 95 AFPPWLLERYLEEWGG----TREGEGVYRLPGAVVRFREVEPLK----VGSLSIPQLRV 145 (168)
T ss_dssp TCCHHHHHHHHHHTTC----EEEETTEEEETTEEEEEEEEEEEE----ETTEEEEEEEE
T ss_pred hCCHHHhhhhhhhcCH----HHhhCCCccCceEEEECCChhhcC----CCCEEcChhHH
Confidence 5788888999988876 2233222 35999999999998 99999998765
No 67
>2fqh_A Hypothetical protein TA0938; structural genomics, Zn-binding,, ontario centre for structural proteomics, OCSP, unknown function; NMR {Thermoplasma acidophilum}
Probab=84.46 E-value=0.35 Score=35.40 Aligned_cols=35 Identities=23% Similarity=0.617 Sum_probs=27.2
Q ss_pred ccccccCCCcccccccccCCCCCCCceEEechhhhhccC
Q 025834 169 FATCYICSSQVRELRHRNCANLDCNLLFLCCADCVKNLR 207 (247)
Q Consensus 169 ~~~C~~C~~~~~~~~~~nc~~~~C~~~~~~c~~c~~~~~ 207 (247)
..-|..||+||..+ |. ..+-.+||.+|+.|...|.
T Consensus 17 ~tGCALCG~tWg~y-Y~---ev~GekLfFCCd~ca~EF~ 51 (109)
T 2fqh_A 17 SKGCALCGATWGDY-HA---DFLGEDLFFCCDICAAEFM 51 (109)
T ss_dssp GGSCSSCCCSCCCS-SC---BCTTCCBSSSCCSSSSCTT
T ss_pred ccceeeeCCchHHH-HH---hccCCeEEEEcHHHHHHHH
Confidence 55699999999875 43 3466789999999987764
No 68
>4erc_A Dual specificity protein phosphatase 23; alpha beta, phosphatase(hydrolase), hydrolase; 1.15A {Homo sapiens} PDB: 2img_A
Probab=77.42 E-value=1.9 Score=32.64 Aligned_cols=26 Identities=23% Similarity=0.450 Sum_probs=18.1
Q ss_pred ceEEEEeCCCc-hHH-HHHHHHH-HcCCC
Q 025834 86 TDILMYCTGGI-RCD-VYSTILR-QRGFH 111 (247)
Q Consensus 86 ~~Iv~YCtgG~-R~e-~aa~~L~-~~Gf~ 111 (247)
.+|++.|..|. |+. .++.+|. ..|++
T Consensus 89 ~~vlVHC~~G~~Rsg~~~a~~l~~~~~~~ 117 (150)
T 4erc_A 89 EAVGVHCALGFGRTGTMLACYLVKERGLA 117 (150)
T ss_dssp CEEEEECSSSSHHHHHHHHHHHHHHHTCC
T ss_pred CCEEEECCCCCCHHHHHHHHHHHHHcCCC
Confidence 48999999987 776 4555554 46663
No 69
>4aor_D Trypsin inhibitor 3; hydrolase-inhibitor complex, miniprotein scaffold, knottins, protease inhibitor; HET: GOL MES; 1.70A {Spinacia oleracea} PDB: 4aoq_D*
Probab=67.22 E-value=1.8 Score=25.35 Aligned_cols=16 Identities=31% Similarity=0.712 Sum_probs=13.9
Q ss_pred CCCCCccccccccCCC
Q 025834 207 RGCCCLNCTTAPQRRP 222 (247)
Q Consensus 207 ~~~c~~~c~~~~~~~~ 222 (247)
..|||.+|..+|++|-
T Consensus 18 ~~ccsg~cvphp~lri 33 (37)
T 4aor_D 18 EQCCSGACVPHPILRI 33 (37)
T ss_dssp GGBTTSCEEECSSBSS
T ss_pred cccccccccCCCeeEE
Confidence 4589999999999984
No 70
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=65.33 E-value=1.4 Score=29.76 Aligned_cols=34 Identities=26% Similarity=0.693 Sum_probs=22.9
Q ss_pred CCCccccccCCCcccccccccCCCCCCCceEEech-hhhhccCCCC
Q 025834 166 ENPFATCYICSSQVRELRHRNCANLDCNLLFLCCA-DCVKNLRGCC 210 (247)
Q Consensus 166 ~~~~~~C~~C~~~~~~~~~~nc~~~~C~~~~~~c~-~c~~~~~~~c 210 (247)
+..+..|..|++|.+. ....|+|+ .|...|++.|
T Consensus 5 ~~~~~~C~~C~~p~~~-----------~~~mI~CD~~C~~WfH~~C 39 (65)
T 2vpb_A 5 SDPVYPCGICTNEVND-----------DQDAILCEASCQKWFHRIC 39 (65)
T ss_dssp ----CBCTTTCSBCCT-----------TSCEEEBTTTTCCEEEHHH
T ss_pred CCCcCcCccCCCccCC-----------CCCeEecccCccccCchhc
Confidence 3457789999999753 24588888 8888877643
No 71
>1k81_A EIF-2-beta, probable translation initiation factor 2 beta subunit; zinc ribbon; NMR {Methanocaldococcus jannaschii} SCOP: g.59.1.1
Probab=64.50 E-value=2.4 Score=25.21 Aligned_cols=29 Identities=17% Similarity=0.424 Sum_probs=21.8
Q ss_pred ccccCCCcccccccccCCCCCCCceEEechhhhhc
Q 025834 171 TCYICSSQVRELRHRNCANLDCNLLFLCCADCVKN 205 (247)
Q Consensus 171 ~C~~C~~~~~~~~~~nc~~~~C~~~~~~c~~c~~~ 205 (247)
.|..|+.|-..+ .. .+ +.+++.|++|...
T Consensus 2 lC~~C~~peT~l--~~-~~---~~~~l~C~aCG~~ 30 (36)
T 1k81_A 2 ICRECGKPDTKI--IK-EG---RVHLLKCMACGAI 30 (36)
T ss_dssp CCSSSCSCEEEE--EE-ET---TEEEEEEETTTEE
T ss_pred CCcCCCCCCcEE--EE-eC---CcEEEEhhcCCCc
Confidence 599999998764 32 11 7889999999764
No 72
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=63.54 E-value=4.4 Score=26.71 Aligned_cols=32 Identities=22% Similarity=0.667 Sum_probs=23.1
Q ss_pred ccccccCCCcccccccccCCCCCCCceEEechhhhhccCCCCC
Q 025834 169 FATCYICSSQVRELRHRNCANLDCNLLFLCCADCVKNLRGCCC 211 (247)
Q Consensus 169 ~~~C~~C~~~~~~~~~~nc~~~~C~~~~~~c~~c~~~~~~~c~ 211 (247)
...|..|++|.+. ....|+|+.|...+++.|-
T Consensus 6 ~~~C~~C~~~~~~-----------~~~mI~Cd~C~~WfH~~Cv 37 (64)
T 1we9_A 6 SGQCGACGESYAA-----------DEFWICCDLCEMWFHGKCV 37 (64)
T ss_dssp CCCCSSSCCCCCS-----------SSCEEECSSSCCEEETTTT
T ss_pred CCCCCCCCCccCC-----------CCCEEEccCCCCCCCcccc
Confidence 4568899998752 1358899999888776543
No 73
>1jl3_A Arsenate reductase; alpha-beta fold, PTP-loop, oxidoreductase; 1.60A {Bacillus subtilis} SCOP: c.44.1.1 PDB: 1z2d_A 1z2e_A 2ipa_B
Probab=55.33 E-value=11 Score=28.75 Aligned_cols=34 Identities=21% Similarity=0.247 Sum_probs=24.6
Q ss_pred eEEEEeCCCc-hHHHHHHHHHHcCCCcEEEccchH
Q 025834 87 DILMYCTGGI-RCDVYSTILRQRGFHNLYTLKGGV 120 (247)
Q Consensus 87 ~Iv~YCtgG~-R~e~aa~~L~~~Gf~nV~~L~GGi 120 (247)
+|++.|+|.+ ||..|.++|+...-.++.+...|+
T Consensus 5 ~VLFVC~gN~cRSpmAEai~~~~~~~~~~v~SAGt 39 (139)
T 1jl3_A 5 IIYFLCTGNSCRSQMAEGWAKQYLGDEWKVYSAGI 39 (139)
T ss_dssp EEEEEESSSSSHHHHHHHHHHHHSCTTEEEEEEES
T ss_pred eEEEEcCCchHHHHHHHHHHHHhCCCCEEEEcCcC
Confidence 5999999865 899999999887533344444444
No 74
>3rof_A Low molecular weight protein-tyrosine-phosphatase; phosphatase, hydrolase; 1.03A {Staphylococcus aureus}
Probab=54.96 E-value=6.6 Score=30.98 Aligned_cols=37 Identities=30% Similarity=0.630 Sum_probs=27.1
Q ss_pred eEEEEeCCCc-hHHHHHHHHHHc----CCCcEEEccchHHHH
Q 025834 87 DILMYCTGGI-RCDVYSTILRQR----GFHNLYTLKGGVSHY 123 (247)
Q Consensus 87 ~Iv~YCtgG~-R~e~aa~~L~~~----Gf~nV~~L~GGi~~w 123 (247)
+|++.|+|.+ ||..|.++|++. |..++.+...|+..|
T Consensus 8 ~vLFVC~gN~cRSpmAE~i~~~~~~~~gl~~~~v~SAGt~~~ 49 (158)
T 3rof_A 8 DVAFVCLGNICRSPMAEAIMRQRLKDRNIHDIKVHSRGTGSW 49 (158)
T ss_dssp EEEEEESSSSSHHHHHHHHHHHHHHHTTCCSEEEEEEETTCC
T ss_pred EEEEEeCCchhHHHHHHHHHHHHHHHcCCCCeEEEecccCCc
Confidence 5999999876 788888777653 655566666777665
No 75
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=53.72 E-value=5.2 Score=29.48 Aligned_cols=31 Identities=26% Similarity=0.510 Sum_probs=19.7
Q ss_pred ccccccCCCcccccccccCCCCCCCceEEech-hhhhccCCCC
Q 025834 169 FATCYICSSQVRELRHRNCANLDCNLLFLCCA-DCVKNLRGCC 210 (247)
Q Consensus 169 ~~~C~~C~~~~~~~~~~nc~~~~C~~~~~~c~-~c~~~~~~~c 210 (247)
+-.|..|++|.+.. ..+++|+ .|...|++.|
T Consensus 3 ~~~C~iC~~p~~~~-----------~~mi~Cdd~C~~WfH~~C 34 (105)
T 2xb1_A 3 VYPCGACRSEVNDD-----------QDAILCEASCQKWFHREC 34 (105)
T ss_dssp CCBCTTTCSBCCTT-----------SCEEECTTTTCCEEEGGG
T ss_pred cCCCCCCCCccCCC-----------CCEEEecCCccccccccc
Confidence 45799999996421 1266676 7766665443
No 76
>1u2p_A Ptpase, low molecular weight protein-tyrosine- phosphatase; hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 1u2q_A
Probab=52.82 E-value=7 Score=30.72 Aligned_cols=37 Identities=22% Similarity=0.524 Sum_probs=26.9
Q ss_pred eEEEEeCCCc-hHHHHHHHHHHc----CCC-cEEEccchHHHH
Q 025834 87 DILMYCTGGI-RCDVYSTILRQR----GFH-NLYTLKGGVSHY 123 (247)
Q Consensus 87 ~Iv~YCtgG~-R~e~aa~~L~~~----Gf~-nV~~L~GGi~~w 123 (247)
+|++.|+|.+ ||..|-++|++. |.. ++.+...|+..|
T Consensus 6 ~VLFVC~gN~cRSpmAEal~~~~~~~~gl~~~~~v~SAGt~~~ 48 (163)
T 1u2p_A 6 HVTFVCTGNICRSPMAEKMFAQQLRHRGLGDAVRVTSAGTGNW 48 (163)
T ss_dssp EEEEEESSSSSHHHHHHHHHHHHHHHTTCTTTEEEEEEESSCT
T ss_pred EEEEEcCCcHhHHHHHHHHHHHHHHHCCCCCcEEEEecccCCC
Confidence 6999999866 888888877654 543 466666777665
No 77
>1jf8_A Arsenate reductase; ptpase I fold, P-loop, sulfinic acid, oxidoreductase; 1.12A {Staphylococcus aureus} SCOP: c.44.1.1 PDB: 1jfv_A 2fxi_A 1lju_A* 1rxi_A 1rxe_A 1ljl_A 2cd7_A 1lk0_A
Probab=51.65 E-value=13 Score=27.98 Aligned_cols=34 Identities=15% Similarity=0.121 Sum_probs=24.6
Q ss_pred eEEEEeCCCc-hHHHHHHHHHHcCCCcEEEccchH
Q 025834 87 DILMYCTGGI-RCDVYSTILRQRGFHNLYTLKGGV 120 (247)
Q Consensus 87 ~Iv~YCtgG~-R~e~aa~~L~~~Gf~nV~~L~GGi 120 (247)
+|++.|+|.+ ||..|.++|++..-.++.+...|+
T Consensus 5 ~VLFVC~gN~cRSpmAEa~~~~~~~~~~~v~SAGt 39 (131)
T 1jf8_A 5 TIYFISTGNSARSQMAEGWGKEILGEGWNVYSAGI 39 (131)
T ss_dssp EEEEEESSSSSHHHHHHHHHHHHSTTTEEEEEEES
T ss_pred EEEEEcCCcchHHHHHHHHHHHhcCCCEEEEcCcC
Confidence 5999999865 899999999886423444444444
No 78
>2kgg_A Histone demethylase jarid1A; PHD finger, histone modification, leukemia, alternative splicing, chromatin regulator, developmental protein; NMR {Homo sapiens} PDB: 2kgi_A* 3gl6_A*
Probab=51.05 E-value=8.2 Score=24.44 Aligned_cols=30 Identities=13% Similarity=0.506 Sum_probs=21.6
Q ss_pred ccccCCCcccccccccCCCCCCCceEEech-hhhhccCCCCC
Q 025834 171 TCYICSSQVRELRHRNCANLDCNLLFLCCA-DCVKNLRGCCC 211 (247)
Q Consensus 171 ~C~~C~~~~~~~~~~nc~~~~C~~~~~~c~-~c~~~~~~~c~ 211 (247)
.|..|++|.+. ....|+|+ .|..-|++.|-
T Consensus 4 ~cc~C~~p~~~-----------~~~mI~Cd~~C~~WfH~~Cv 34 (52)
T 2kgg_A 4 AAQNCQRPCKD-----------KVDWVQCDGGCDEWFHQVCV 34 (52)
T ss_dssp SCTTCCCCCCT-----------TCCEEECTTTTCCEEETTTT
T ss_pred cCCCCcCccCC-----------CCcEEEeCCCCCccCccccc
Confidence 47788888642 24578999 89988887653
No 79
>2img_A Dual specificity protein phosphatase 23; DUSP23, VHZ, LDP-3, dual specicity protein phosphatase 23, DUS23_human, malate, structural genomics, PSI; 1.93A {Homo sapiens}
Probab=49.99 E-value=13 Score=27.63 Aligned_cols=25 Identities=20% Similarity=0.418 Sum_probs=17.0
Q ss_pred ceEEEEeCCCc-hHH-HHHHHHHHc-CC
Q 025834 86 TDILMYCTGGI-RCD-VYSTILRQR-GF 110 (247)
Q Consensus 86 ~~Iv~YCtgG~-R~e-~aa~~L~~~-Gf 110 (247)
.+|++.|..|. |+. .++.+|... |.
T Consensus 90 ~~vlVHC~aG~~Rsg~~~~~~l~~~~~~ 117 (151)
T 2img_A 90 EAVGVHCALGFGRTGTMLACYLVKERGL 117 (151)
T ss_dssp CEEEEECSSSSSHHHHHHHHHHHHHHCC
T ss_pred CcEEEECCCCCChHHHHHHHHHHHHhCc
Confidence 48999999886 765 345555544 65
No 80
>2l17_A Synarsc, arsenate reductase; alpha/beta sandwich, oxidoreductase; NMR {Synechocystis} PDB: 2l18_A 2l19_A
Probab=48.91 E-value=19 Score=27.24 Aligned_cols=35 Identities=11% Similarity=0.290 Sum_probs=26.5
Q ss_pred eEEEEeCCCc-hHHHHHHHHHHcCCCcEEEccchHH
Q 025834 87 DILMYCTGGI-RCDVYSTILRQRGFHNLYTLKGGVS 121 (247)
Q Consensus 87 ~Iv~YCtgG~-R~e~aa~~L~~~Gf~nV~~L~GGi~ 121 (247)
+|++.|+|.+ ||..|.++|+++.-+++.+...|+.
T Consensus 6 ~VLFVC~gN~cRSpmAEa~~~~~~~~~~~v~SAGt~ 41 (134)
T 2l17_A 6 KVMFVCKRNSCRSQMAEGFAKTLGAGKIAVTSCGLE 41 (134)
T ss_dssp EEEEECCSSTHHHHHHHHHHHHHSBTTEEEEEECCT
T ss_pred EEEEEeCCchHHHHHHHHHHHHHcCCCEEEEcccCC
Confidence 5999999865 8999999998875445655565654
No 81
>3rh0_A Arsenate reductase; oxidoreductase; 1.72A {Corynebacterium glutamicum}
Probab=47.85 E-value=13 Score=28.94 Aligned_cols=34 Identities=12% Similarity=0.320 Sum_probs=24.5
Q ss_pred eEEEEeCCCc-hHHHHHHHHHHcCCCcEEEccchH
Q 025834 87 DILMYCTGGI-RCDVYSTILRQRGFHNLYTLKGGV 120 (247)
Q Consensus 87 ~Iv~YCtgG~-R~e~aa~~L~~~Gf~nV~~L~GGi 120 (247)
+|++.|+|.+ ||..|.++|+++.-.++.+...|+
T Consensus 22 ~VLFVC~gN~cRSpmAEal~~~~~~~~~~v~SAGt 56 (148)
T 3rh0_A 22 SVLFVCVGNGGKSQMAAALAQKYASDSVEIHSAGT 56 (148)
T ss_dssp EEEEEESSSSSHHHHHHHHHHHHCCTTSEEEEEES
T ss_pred EEEEECCCchhHHHHHHHHHHHhcCCCEEEEeccc
Confidence 5999999865 899999999887633344444443
No 82
>2cwd_A Low molecular weight phosphotyrosine protein PHOS; tyrosine phosphatase, structural genomics; 1.90A {Thermus thermophilus}
Probab=46.78 E-value=10 Score=29.78 Aligned_cols=38 Identities=24% Similarity=0.481 Sum_probs=28.3
Q ss_pred eEEEEeCCCc-hHHHHHHHHHHc----CC-CcEEEccchHHHHH
Q 025834 87 DILMYCTGGI-RCDVYSTILRQR----GF-HNLYTLKGGVSHYL 124 (247)
Q Consensus 87 ~Iv~YCtgG~-R~e~aa~~L~~~----Gf-~nV~~L~GGi~~w~ 124 (247)
+|++.|+|.+ ||..|-++|+++ |. .++.+...|+..|.
T Consensus 6 ~VLFVC~gN~cRSpmAEal~~~~~~~~gl~~~~~v~SAGt~~~~ 49 (161)
T 2cwd_A 6 RVLFVCLGNICRSPMAEGIFRKLLKERGLEDRFEVDSAGTGAWH 49 (161)
T ss_dssp EEEEEESSSSSHHHHHHHHHHHHHHHHTCTTTEEEEEEESSCTT
T ss_pred EEEEECCCcHHHHHHHHHHHHHHHHHcCCCCcEEEEecccCCCc
Confidence 6999999865 888888887654 55 35777777877764
No 83
>3ezz_A Dual specificity protein phosphatase 4; alpha/beta, hydrolase, nucleus; 2.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1m3g_A
Probab=46.78 E-value=15 Score=27.52 Aligned_cols=25 Identities=20% Similarity=0.359 Sum_probs=17.4
Q ss_pred ceEEEEeCCCc-hHH-HHHHHH-HHcCC
Q 025834 86 TDILMYCTGGI-RCD-VYSTIL-RQRGF 110 (247)
Q Consensus 86 ~~Iv~YCtgG~-R~e-~aa~~L-~~~Gf 110 (247)
.+|++.|..|. |+. .++++| ...|+
T Consensus 82 ~~VlVHC~~G~~RS~~~~~aylm~~~~~ 109 (144)
T 3ezz_A 82 GRVLVHSQAGISRSATICLAYLMMKKRV 109 (144)
T ss_dssp CCEEEEESSSSSHHHHHHHHHHHHHHTC
T ss_pred CeEEEECCCCCChhHHHHHHHHHHHcCC
Confidence 36999999986 765 455555 44665
No 84
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=46.27 E-value=7.4 Score=31.63 Aligned_cols=33 Identities=15% Similarity=0.431 Sum_probs=22.1
Q ss_pred ccccCCCcccccccccCCCCCCCceEEechhhhhccCCCCC
Q 025834 171 TCYICSSQVRELRHRNCANLDCNLLFLCCADCVKNLRGCCC 211 (247)
Q Consensus 171 ~C~~C~~~~~~~~~~nc~~~~C~~~~~~c~~c~~~~~~~c~ 211 (247)
.|..|+++.+... -....|+|+.|...+++.|-
T Consensus 4 ~CpiC~k~Y~~~~--------~~~~MIqCd~C~~W~H~~Cv 36 (183)
T 3lqh_A 4 FCPLCDKCYDDDD--------YESKMMQCGKCDRWVHSKCE 36 (183)
T ss_dssp BCTTTCCBCTTCC--------TTCCEEECTTTCCEEEGGGS
T ss_pred cCCCCcCccCCcc--------cCCCeEECCCCCcccchhcc
Confidence 4999999986421 13457888888777765443
No 85
>1d1q_A Tyrosine phosphatase (E.C.3.1.3.48); beta-alpha-beta, hydrolase; HET: 4NP; 1.70A {Saccharomyces cerevisiae} SCOP: c.44.1.1 PDB: 1d2a_A* 1d1p_A*
Probab=45.95 E-value=7 Score=30.71 Aligned_cols=38 Identities=16% Similarity=0.270 Sum_probs=26.3
Q ss_pred ceEEEEeCCCc-hHHHHHHHHHHc----CCC-c-EEEccchHHHH
Q 025834 86 TDILMYCTGGI-RCDVYSTILRQR----GFH-N-LYTLKGGVSHY 123 (247)
Q Consensus 86 ~~Iv~YCtgG~-R~e~aa~~L~~~----Gf~-n-V~~L~GGi~~w 123 (247)
++|++.|+|.+ ||..|-++|++. |.. + +.+...|+..|
T Consensus 8 ~~VLFVCtgN~cRSpmAEal~~~~~~~~gl~~~~~~v~SAGt~~~ 52 (161)
T 1d1q_A 8 ISVAFIALGNFCRSPMAEAIFKHEVEKANLENRFNKIDSFGTSNY 52 (161)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHHHHTTCGGGEEEEEEEESSCT
T ss_pred CEEEEEcCCcHHHHHHHHHHHHHHHHHcCCCCCeEEEEeccccCC
Confidence 36999999865 888888877653 443 2 55666666655
No 86
>2jgn_A DBX, DDX3, ATP-dependent RNA helicase DDX3X; phosphorylation, nucleotide-binding, hydrolase, RNA-binding, ATP-binding, DNA-binding, nuclear protein; 1.91A {Homo sapiens}
Probab=43.56 E-value=20 Score=28.24 Aligned_cols=35 Identities=17% Similarity=0.291 Sum_probs=26.8
Q ss_pred eEEEEeCCCchHHHHHHHHHHcCCCcEEEccchHHH
Q 025834 87 DILMYCTGGIRCDVYSTILRQRGFHNLYTLKGGVSH 122 (247)
Q Consensus 87 ~Iv~YCtgG~R~e~aa~~L~~~Gf~nV~~L~GGi~~ 122 (247)
++|+||+.-..++.++..|...|+. +..+.|++..
T Consensus 48 k~lVF~~~~~~~~~l~~~L~~~g~~-~~~lhg~~~~ 82 (185)
T 2jgn_A 48 LTLVFVETKKGADSLEDFLYHEGYA-CTSIHGDRSQ 82 (185)
T ss_dssp CEEEEESCHHHHHHHHHHHHHTTCC-EEEEC-----
T ss_pred eEEEEECCHHHHHHHHHHHHHcCCc-eEEEeCCCCH
Confidence 5999999878899999999999985 8889998754
No 87
>2hjv_A ATP-dependent RNA helicase DBPA; parallel alpha-beta, hydrolase; 1.95A {Bacillus subtilis}
Probab=43.02 E-value=16 Score=27.91 Aligned_cols=34 Identities=15% Similarity=0.408 Sum_probs=29.6
Q ss_pred eEEEEeCCCchHHHHHHHHHHcCCCcEEEccchHH
Q 025834 87 DILMYCTGGIRCDVYSTILRQRGFHNLYTLKGGVS 121 (247)
Q Consensus 87 ~Iv~YCtgG~R~e~aa~~L~~~Gf~nV~~L~GGi~ 121 (247)
++|+||+.-..++.++..|.+.|+. +..+.|++.
T Consensus 37 ~~lVF~~~~~~~~~l~~~L~~~~~~-~~~~hg~~~ 70 (163)
T 2hjv_A 37 SCIIFCRTKEHVNQLTDELDDLGYP-CDKIHGGMI 70 (163)
T ss_dssp SEEEECSSHHHHHHHHHHHHHTTCC-EEEECTTSC
T ss_pred cEEEEECCHHHHHHHHHHHHHcCCc-EEEEeCCCC
Confidence 5999999888899999999999985 888999864
No 88
>2rb4_A ATP-dependent RNA helicase DDX25; rossmann fold, structural genomics, structural consortium, SGC, alternative initiation, ATP-binding, devel protein; 2.80A {Homo sapiens}
Probab=42.56 E-value=15 Score=28.41 Aligned_cols=34 Identities=15% Similarity=0.367 Sum_probs=29.7
Q ss_pred eEEEEeCCCchHHHHHHHHHHcCCCcEEEccchHH
Q 025834 87 DILMYCTGGIRCDVYSTILRQRGFHNLYTLKGGVS 121 (247)
Q Consensus 87 ~Iv~YCtgG~R~e~aa~~L~~~Gf~nV~~L~GGi~ 121 (247)
++|+||+.-..++.++..|...|+. +..+.|++.
T Consensus 36 ~~lVF~~~~~~~~~l~~~L~~~~~~-~~~~~g~~~ 69 (175)
T 2rb4_A 36 QAIIFCQTRRNAKWLTVEMIQDGHQ-VSLLSGELT 69 (175)
T ss_dssp EEEEECSCHHHHHHHHHHHHTTTCC-EEEECSSCC
T ss_pred CEEEEECCHHHHHHHHHHHHHcCCc-EEEEeCCCC
Confidence 6999999888899999999999985 888999853
No 89
>4g29_A Secreted effector protein SSEI; cysteine protease superfamily, protein binding; 1.70A {Salmonella enterica subsp} PDB: 4g2b_A
Probab=42.31 E-value=5.6 Score=32.17 Aligned_cols=42 Identities=24% Similarity=0.390 Sum_probs=29.4
Q ss_pred HHHHHHHHHcCCCcEEEccchHHHHHHCc--CCc-------eeecceeEEeee
Q 025834 99 DVYSTILRQRGFHNLYTLKGGVSHYLENE--GPV-------EWVGNLFVFDSR 142 (247)
Q Consensus 99 e~aa~~L~~~Gf~nV~~L~GGi~~w~~~g--~~~-------~~~G~~fvFD~R 142 (247)
..++.+|++.||.+|..- ||.-|.... .|. .+.|+.||||--
T Consensus 47 ~~V~~~Lk~~gy~dIRyr--~m~iW~~a~dd~p~NH~vVl~kk~g~eyVfDlT 97 (186)
T 4g29_A 47 TPVSNFMNEKGFDNIRYR--GIFIWDKPTEEIPTNHFAVVGNKEGKDYVFDVS 97 (186)
T ss_dssp HHHHHHHHHTTCEEEEEE--EEEEESSTTCSSCEEEEEEEEEETTEEEEEETT
T ss_pred HHHHHHHHhCCCceeeee--eEEeccCccccCccceEEEEEeecCceEEEccc
Confidence 346778999999887753 666666543 332 278999999953
No 90
>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=40.46 E-value=15 Score=24.70 Aligned_cols=34 Identities=21% Similarity=0.429 Sum_probs=22.8
Q ss_pred CCCccccccCCCcccccccccCCCCCCCceEEechhhhhccCCCCC
Q 025834 166 ENPFATCYICSSQVRELRHRNCANLDCNLLFLCCADCVKNLRGCCC 211 (247)
Q Consensus 166 ~~~~~~C~~C~~~~~~~~~~nc~~~~C~~~~~~c~~c~~~~~~~c~ 211 (247)
+.....| .|+.+.+. ....|+|+.|...+++.|-
T Consensus 13 ~~~~~~C-~C~~~~~~-----------g~~mI~Cd~C~~W~H~~Cv 46 (72)
T 1wee_A 13 DNWKVDC-KCGTKDDD-----------GERMLACDGCGVWHHTRCI 46 (72)
T ss_dssp CSSEECC-TTCCCSCC-----------SSCEEECSSSCEEEETTTT
T ss_pred CCcceEe-eCCCccCC-----------CCcEEECCCCCCccCCeee
Confidence 3446788 49988532 1347888999888776543
No 91
>1fuk_A Eukaryotic initiation factor 4A; helicase, DEAD-box protein, translation; 1.75A {Saccharomyces cerevisiae} SCOP: c.37.1.19
Probab=40.29 E-value=21 Score=27.30 Aligned_cols=34 Identities=15% Similarity=0.403 Sum_probs=29.5
Q ss_pred eEEEEeCCCchHHHHHHHHHHcCCCcEEEccchHH
Q 025834 87 DILMYCTGGIRCDVYSTILRQRGFHNLYTLKGGVS 121 (247)
Q Consensus 87 ~Iv~YCtgG~R~e~aa~~L~~~Gf~nV~~L~GGi~ 121 (247)
++++||+.-..++.++..|.+.|+. +..+.|++.
T Consensus 32 ~~lVF~~~~~~~~~l~~~L~~~~~~-~~~~~~~~~ 65 (165)
T 1fuk_A 32 QAVIFCNTRRKVEELTTKLRNDKFT-VSAIYSDLP 65 (165)
T ss_dssp CEEEEESSHHHHHHHHHHHHHTTCC-EEEECTTSC
T ss_pred CEEEEECCHHHHHHHHHHHHHcCCC-EEEEECCCC
Confidence 5999999888899999999999985 888999854
No 92
>3jvi_A Protein tyrosine phosphatase; niaid, ssgcid, seattle structural genomics center for infect disease, parasitic protozoan, dysentery; 1.80A {Entamoeba histolytica} PDB: 3js5_A* 3ily_A 3ido_A*
Probab=40.28 E-value=8.9 Score=30.18 Aligned_cols=37 Identities=19% Similarity=0.487 Sum_probs=26.6
Q ss_pred eEEEEeCCCc-hHHHHHHHHHH----cCC-CcEEEccchHHHH
Q 025834 87 DILMYCTGGI-RCDVYSTILRQ----RGF-HNLYTLKGGVSHY 123 (247)
Q Consensus 87 ~Iv~YCtgG~-R~e~aa~~L~~----~Gf-~nV~~L~GGi~~w 123 (247)
+|++.|+|.+ ||..|.++|++ .|. .++.+..-|+..|
T Consensus 6 ~vLFVC~gN~cRSpmAE~~~~~~~~~~gl~~~~~v~SAGt~~~ 48 (161)
T 3jvi_A 6 KLLFVCLGNICRSPAAEAVMKKVIQNHHLTEKYICDSAGTCSY 48 (161)
T ss_dssp EEEEEESSSSSHHHHHHHHHHHHHHHTTCGGGEEEEEEESCCT
T ss_pred EEEEECCCchhHHHHHHHHHHHHHHHcCCCCcEEEEeeecCCc
Confidence 6999999876 78888777765 354 3466666677666
No 93
>1nee_A EIF-2-beta, probable translation initiation factor 2 beta subunit; two domain protein, mixed alpha-beta structure; NMR {Methanothermobacterthermautotrophicus} SCOP: d.241.1.1 g.59.1.1
Probab=40.19 E-value=11 Score=29.32 Aligned_cols=31 Identities=19% Similarity=0.515 Sum_probs=23.8
Q ss_pred ccccccCCCcccccccccCCCCCCCceEEechhhhhc
Q 025834 169 FATCYICSSQVRELRHRNCANLDCNLLFLCCADCVKN 205 (247)
Q Consensus 169 ~~~C~~C~~~~~~~~~~nc~~~~C~~~~~~c~~c~~~ 205 (247)
+-.|..|+.|-..+ .. .=+.+++.|.+|.+.
T Consensus 102 yVlC~~C~sPdT~l--~k----~~r~~~l~C~ACGa~ 132 (138)
T 1nee_A 102 FVICHECNRPDTRI--IR----EGRISLLKCEACGAK 132 (138)
T ss_dssp HHHHTCCSSCSSCC--EE----ETTTTEEECSTTSCC
T ss_pred EEECCCCCCcCcEE--EE----cCCeEEEEccCCCCC
Confidence 56899999998764 32 127899999999764
No 94
>3n8i_A Low molecular weight phosphotyrosine protein PHOS; tyrosine phosphatase, hydrolase, protein-ligand complex; HET: NLA; 1.50A {Homo sapiens} SCOP: c.44.1.1 PDB: 5pnt_A* 1xww_A 1bvh_A 1dg9_A* 1phr_A 1pnt_A 1z12_A 1z13_A 1c0e_A 2p4u_A
Probab=39.08 E-value=7.4 Score=30.57 Aligned_cols=38 Identities=24% Similarity=0.494 Sum_probs=27.6
Q ss_pred ceEEEEeCCCc-hHHHHHHHHHH----cCCC-cEEEccchHHHH
Q 025834 86 TDILMYCTGGI-RCDVYSTILRQ----RGFH-NLYTLKGGVSHY 123 (247)
Q Consensus 86 ~~Iv~YCtgG~-R~e~aa~~L~~----~Gf~-nV~~L~GGi~~w 123 (247)
++|++.|+|.+ ||..|.++|++ .|.. ++.+...|+..|
T Consensus 6 ~~vLFVC~gN~cRSpmAE~~~~~~~~~~gl~~~~~v~SAGt~~~ 49 (157)
T 3n8i_A 6 KSVLFVCLGNICRSPIAEAVFRKLVTDQNISENWRVDSAATSGY 49 (157)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHHHHTTCGGGEEEEEEESSST
T ss_pred CEEEEECCCchhHHHHHHHHHHHHHHHcCCCCcEEEEeeecCcc
Confidence 36999999876 78888777765 3554 466667777766
No 95
>2d74_B Translation initiation factor 2 beta subunit; protein complex; 2.80A {Pyrococcus furiosus} PDB: 2dcu_B*
Probab=38.68 E-value=11 Score=29.62 Aligned_cols=31 Identities=23% Similarity=0.584 Sum_probs=23.6
Q ss_pred ccccccCCCcccccccccCCCCCCCceEEechhhhhc
Q 025834 169 FATCYICSSQVRELRHRNCANLDCNLLFLCCADCVKN 205 (247)
Q Consensus 169 ~~~C~~C~~~~~~~~~~nc~~~~C~~~~~~c~~c~~~ 205 (247)
+-.|..|+.|-..+ .. .=+.+++.|.+|.+.
T Consensus 104 yVlC~~C~sPdT~L--~k----~~r~~~l~C~ACGa~ 134 (148)
T 2d74_B 104 YVICPVCGSPDTKI--IK----RDRFHFLKCEACGAE 134 (148)
T ss_dssp HSSCSSSCCTTCCC--CB----SSSSBCCCCSSSCCC
T ss_pred EEECCCCCCcCcEE--EE----eCCEEEEEecCCCCC
Confidence 46899999998765 32 127899999999764
No 96
>4etn_A LMPTP, low molecular weight protein-tyrosine-phosphatase; dephosphorylation, hydrolase; 1.10A {Bacillus subtilis} PDB: 4eti_A 1zgg_A
Probab=38.28 E-value=7.9 Score=31.36 Aligned_cols=38 Identities=26% Similarity=0.482 Sum_probs=26.8
Q ss_pred ceEEEEeCCCc-hHHHHHHHHHHc----CCCcEEEccchHHHHH
Q 025834 86 TDILMYCTGGI-RCDVYSTILRQR----GFHNLYTLKGGVSHYL 124 (247)
Q Consensus 86 ~~Iv~YCtgG~-R~e~aa~~L~~~----Gf~nV~~L~GGi~~w~ 124 (247)
.+|++.|+|.+ ||..|.++|+++ |. ++.+..-|+..|.
T Consensus 35 ~~VLFVC~gNiCRSpmAEai~r~~~~~~g~-~~~v~SAGt~~~~ 77 (184)
T 4etn_A 35 MDIIFVCTGNTSRSPMAEALFKSIAEREGL-NVNVRSAGVFASP 77 (184)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHHHHHTC-CEEEEEEETTCCT
T ss_pred CEEEEECCCchhHHHHHHHHHHHHHHhcCC-cEEEEeeecCCcC
Confidence 36999999876 888888887654 42 4666666766653
No 97
>1t5i_A C_terminal domain of A probable ATP-dependent RNA helicase; RECA-like fold, PRE-mRNA processing protein; 1.90A {Homo sapiens} SCOP: c.37.1.19
Probab=37.81 E-value=22 Score=27.58 Aligned_cols=34 Identities=15% Similarity=0.455 Sum_probs=29.6
Q ss_pred eEEEEeCCCchHHHHHHHHHHcCCCcEEEccchHH
Q 025834 87 DILMYCTGGIRCDVYSTILRQRGFHNLYTLKGGVS 121 (247)
Q Consensus 87 ~Iv~YCtgG~R~e~aa~~L~~~Gf~nV~~L~GGi~ 121 (247)
++|+||+.-..++.++..|...|+. +..+.|++.
T Consensus 33 ~~lVF~~~~~~~~~l~~~L~~~~~~-~~~~hg~~~ 66 (172)
T 1t5i_A 33 QVVIFVKSVQRCIALAQLLVEQNFP-AIAIHRGMP 66 (172)
T ss_dssp SEEEECSSHHHHHHHHHHHHHTTCC-EEEECTTSC
T ss_pred cEEEEECCHHHHHHHHHHHHhcCCC-EEEEECCCC
Confidence 5999999888899999999999985 888899864
No 98
>3rgo_A Protein-tyrosine phosphatase mitochondrial 1; phosphatidylglycerol phosphate (PGP) phosphatase, hydrolase; 1.93A {Mus musculus} PDB: 3rgq_A*
Probab=37.80 E-value=28 Score=26.09 Aligned_cols=26 Identities=15% Similarity=0.377 Sum_probs=18.2
Q ss_pred ceEEEEeCCCc-hHHHH-HHHH-HHcCCC
Q 025834 86 TDILMYCTGGI-RCDVY-STIL-RQRGFH 111 (247)
Q Consensus 86 ~~Iv~YCtgG~-R~e~a-a~~L-~~~Gf~ 111 (247)
.+|++.|..|. |+..+ +++| ...|.+
T Consensus 90 ~~vlVHC~~G~~Rsg~~~~a~l~~~~~~~ 118 (157)
T 3rgo_A 90 QCVYVHCKAGRSRSATMVAAYLIQVHNWS 118 (157)
T ss_dssp CEEEEESSSSSSHHHHHHHHHHHHHHTCC
T ss_pred CEEEEECCCCCChHHHHHHHHHHHHcCCC
Confidence 48999999998 87644 5555 446653
No 99
>2nt2_A Protein phosphatase slingshot homolog 2; alpha/beta hydrolase; 2.10A {Homo sapiens}
Probab=36.98 E-value=34 Score=25.47 Aligned_cols=25 Identities=16% Similarity=0.254 Sum_probs=17.2
Q ss_pred ceEEEEeCCC-chHH-HHHHHH-HHcCC
Q 025834 86 TDILMYCTGG-IRCD-VYSTIL-RQRGF 110 (247)
Q Consensus 86 ~~Iv~YCtgG-~R~e-~aa~~L-~~~Gf 110 (247)
.+|+++|..| .|+. .+++|| ...|+
T Consensus 82 ~~VlVHC~~G~~RS~~~v~ayLm~~~~~ 109 (145)
T 2nt2_A 82 SKCLVHSKMGVSRSASTVIAYAMKEYGW 109 (145)
T ss_dssp CEEEEECSSSSSHHHHHHHHHHHHHHCC
T ss_pred CeEEEECCCCCchHHHHHHHHHHHHhCC
Confidence 4799999998 5775 344555 45565
No 100
>3s4e_A Dual specificity protein phosphatase 19; PTP, protein tyrosine phosphatase, hydrolase; 1.26A {Homo sapiens}
Probab=36.39 E-value=22 Score=26.55 Aligned_cols=26 Identities=15% Similarity=0.255 Sum_probs=17.5
Q ss_pred ceEEEEeCCCc-hHH-HHHHHH-HHcCCC
Q 025834 86 TDILMYCTGGI-RCD-VYSTIL-RQRGFH 111 (247)
Q Consensus 86 ~~Iv~YCtgG~-R~e-~aa~~L-~~~Gf~ 111 (247)
.+|++.|..|. |+. .++++| ...|++
T Consensus 82 ~~VlVHC~~G~sRS~~~v~ayLm~~~~~~ 110 (144)
T 3s4e_A 82 GVVLVHSNAGVSRAAAIVIGFLMNSEQTS 110 (144)
T ss_dssp CCEEEECSSSSSHHHHHHHHHHHHHHCCC
T ss_pred CeEEEEcCCCCchHHHHHHHHHHHHcCCC
Confidence 36999999987 754 445555 446653
No 101
>3cw2_K Translation initiation factor 2 subunit beta; AIF2, intact AIF2, initiation factor 2 alpha subunit, initiation factor 2 beta subunit; 2.80A {Sulfolobus solfataricus} PDB: 2nxu_A 2qmu_C* 3v11_C*
Probab=36.07 E-value=11 Score=29.28 Aligned_cols=32 Identities=19% Similarity=0.549 Sum_probs=21.3
Q ss_pred CccccccCCCcccccccccCCCCCCCceEEechhhhhc
Q 025834 168 PFATCYICSSQVRELRHRNCANLDCNLLFLCCADCVKN 205 (247)
Q Consensus 168 ~~~~C~~C~~~~~~~~~~nc~~~~C~~~~~~c~~c~~~ 205 (247)
.+-.|..|+.|-..+ .. .=+.+++.|.+|.+.
T Consensus 102 ~yVlC~~C~sPdT~l--~k----~~r~~~l~C~ACGa~ 133 (139)
T 3cw2_K 102 AYVECSTCKSLDTIL--KK----EKKSWYIVCLACGAQ 133 (139)
T ss_dssp CCSSCCSSSSSCCCS--CS----SCSTTTSSCCC----
T ss_pred HeeECCCCCCcCcEE--EE----eCCeEEEEecCCCCC
Confidence 357899999998754 32 127889999999764
No 102
>1p8a_A Protein tyrosine phosphatase; hydrolase; NMR {Tritrichomonas foetus} SCOP: c.44.1.1
Probab=35.09 E-value=3.3 Score=32.05 Aligned_cols=37 Identities=24% Similarity=0.327 Sum_probs=25.9
Q ss_pred eEEEEeCCCc-hHHHHHHHHHHcCCCcEEEccchHHHH
Q 025834 87 DILMYCTGGI-RCDVYSTILRQRGFHNLYTLKGGVSHY 123 (247)
Q Consensus 87 ~Iv~YCtgG~-R~e~aa~~L~~~Gf~nV~~L~GGi~~w 123 (247)
+|++.|+|.+ ||..|.++|+++.-+.+.+...|+..|
T Consensus 6 ~VLFVC~gN~cRSpmAEal~~~~~~~~~~v~SAGt~~~ 43 (146)
T 1p8a_A 6 AVLFVCLGNICRSPACEGICRDMVGDKLIIDSAATSGF 43 (146)
T ss_dssp CEEEESSSSCSSSTTHHHHHHHHHSSCSSCEEECSCTT
T ss_pred EEEEEcCCcHHHHHHHHHHHHHhcCCCEEEEeeecCCc
Confidence 5999999865 888888888876433344445566555
No 103
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=34.58 E-value=11 Score=25.92 Aligned_cols=26 Identities=19% Similarity=0.507 Sum_probs=15.0
Q ss_pred ccccccCCCcccccccccCCCCCCCceEEechhhhhcc
Q 025834 169 FATCYICSSQVRELRHRNCANLDCNLLFLCCADCVKNL 206 (247)
Q Consensus 169 ~~~C~~C~~~~~~~~~~nc~~~~C~~~~~~c~~c~~~~ 206 (247)
...| .|++|.+. ....|+|+.|...+
T Consensus 12 ~~~C-~C~~~~d~-----------~~~MIqCd~C~~Wf 37 (79)
T 1wep_A 12 PVYC-LCRQPYNV-----------NHFMIECGLCQDWF 37 (79)
T ss_dssp CCCS-TTSCSCCS-----------SSCEEEBTTTCCEE
T ss_pred ccEE-EcCCccCC-----------CCceEEcCCCCCcE
Confidence 3456 89998742 12356666665443
No 104
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=34.54 E-value=27 Score=22.81 Aligned_cols=33 Identities=21% Similarity=0.523 Sum_probs=22.9
Q ss_pred ccccccCCCcccccccccCCCCCCCceEEechhhhhccCCCCC
Q 025834 169 FATCYICSSQVRELRHRNCANLDCNLLFLCCADCVKNLRGCCC 211 (247)
Q Consensus 169 ~~~C~~C~~~~~~~~~~nc~~~~C~~~~~~c~~c~~~~~~~c~ 211 (247)
-..|..|+...+.. ...+|.|+.|...|+-.|-
T Consensus 6 ~~~C~vC~~~~~~~----------~~~ll~Cd~C~~~~H~~C~ 38 (66)
T 2yt5_A 6 SGVCTICQEEYSEA----------PNEMVICDKCGQGYHQLCH 38 (66)
T ss_dssp CCCBSSSCCCCCBT----------TBCEEECSSSCCEEETTTS
T ss_pred CCCCCCCCCCCCCC----------CCCEEECCCCChHHHhhhC
Confidence 34699999775421 1258999999988876653
No 105
>2wmy_A WZB, putative acid phosphatase WZB; hydrolase; 2.21A {Escherichia coli}
Probab=34.50 E-value=28 Score=26.78 Aligned_cols=33 Identities=33% Similarity=0.472 Sum_probs=23.7
Q ss_pred eEEEEeCCCc-hHHHHHHHHHHcCCCcEEEccchH
Q 025834 87 DILMYCTGGI-RCDVYSTILRQRGFHNLYTLKGGV 120 (247)
Q Consensus 87 ~Iv~YCtgG~-R~e~aa~~L~~~Gf~nV~~L~GGi 120 (247)
+|++.|+|.+ ||..|.++|++.. .++.+...|+
T Consensus 10 ~VLFVC~gN~cRSpmAEal~r~~~-~~~~v~SAGt 43 (150)
T 2wmy_A 10 SILVICTGNICRSPIGERLLRRLL-PSKKINSAGV 43 (150)
T ss_dssp EEEEEESSSSSHHHHHHHHHHHHC-TTSEEEEEET
T ss_pred EEEEEcCCchHHHHHHHHHHHHhc-CCCEEEeccc
Confidence 5999999865 8999999998764 2344444444
No 106
>3eaq_A Heat resistant RNA dependent ATPase; DEAD box RNA helicase, dimer, ATP-binding, helicase, hydrolase, nucleotide-binding; 2.30A {Thermus thermophilus} PDB: 3ear_A 3eas_A
Probab=33.81 E-value=25 Score=28.29 Aligned_cols=34 Identities=15% Similarity=0.206 Sum_probs=29.2
Q ss_pred eEEEEeCCCchHHHHHHHHHHcCCCcEEEccchHH
Q 025834 87 DILMYCTGGIRCDVYSTILRQRGFHNLYTLKGGVS 121 (247)
Q Consensus 87 ~Iv~YCtgG~R~e~aa~~L~~~Gf~nV~~L~GGi~ 121 (247)
++++||++-..++.++..|...|+. +..|.|++.
T Consensus 33 ~~lVF~~~~~~~~~l~~~L~~~~~~-~~~lhg~~~ 66 (212)
T 3eaq_A 33 RAMVFTRTKAETEEIAQGLLRLGHP-AQALHGDLS 66 (212)
T ss_dssp CEEEECSSHHHHHHHHHHHHHHTCC-EEEECSSSC
T ss_pred eEEEEeCCHHHHHHHHHHHHHcCCC-EEEEECCCC
Confidence 5999999877788999999999985 888999854
No 107
>2e0t_A Dual specificity phosphatase 26; conserved hypothetical protein, structural genomics, NPPSFA, project on protein structural and functional analyses; 1.67A {Homo sapiens}
Probab=33.59 E-value=32 Score=25.71 Aligned_cols=25 Identities=24% Similarity=0.331 Sum_probs=17.6
Q ss_pred ceEEEEeCCC-chHH-HHHHHH-HHcCC
Q 025834 86 TDILMYCTGG-IRCD-VYSTIL-RQRGF 110 (247)
Q Consensus 86 ~~Iv~YCtgG-~R~e-~aa~~L-~~~Gf 110 (247)
.+|+++|..| .|+. .++++| ...|+
T Consensus 86 ~~vlVHC~aG~~RSg~~~~ayl~~~~~~ 113 (151)
T 2e0t_A 86 GKILVHCAVGVSRSATLVLAYLMLYHHL 113 (151)
T ss_dssp CCEEEECSSSSHHHHHHHHHHHHHHSCC
T ss_pred CcEEEECCCCCChHHHHHHHHHHHHcCC
Confidence 4799999998 5766 555555 45565
No 108
>1y1l_A Arsenate reductase (ARSC); detoxification, cadmium, oxidized form, structural genomics, PSI, protein structure initiative; 2.80A {Archaeoglobus fulgidus} SCOP: c.44.1.1
Probab=33.55 E-value=27 Score=25.95 Aligned_cols=22 Identities=14% Similarity=0.345 Sum_probs=18.7
Q ss_pred EEEEeCCCc-hHHHHHHHHHHcC
Q 025834 88 ILMYCTGGI-RCDVYSTILRQRG 109 (247)
Q Consensus 88 Iv~YCtgG~-R~e~aa~~L~~~G 109 (247)
|++.|+|.+ ||..|.++|+++.
T Consensus 2 VLFVC~gN~cRSpmAEa~~~~~~ 24 (124)
T 1y1l_A 2 VLFVCIHNTARSVMAEALFNAMA 24 (124)
T ss_dssp EEEEESSCSSHHHHHHHHHHTTC
T ss_pred EEEEeCCChhHHHHHHHHHHHhc
Confidence 899999865 8999999998764
No 109
>2fek_A Low molecular weight protein-tyrosine- phosphatase WZB; phosphate binding, hydrolase; NMR {Escherichia coli K12}
Probab=33.28 E-value=33 Score=27.10 Aligned_cols=34 Identities=26% Similarity=0.491 Sum_probs=24.5
Q ss_pred eEEEEeCCCc-hHHHHHHHHHHcCCCcEEEccchHH
Q 025834 87 DILMYCTGGI-RCDVYSTILRQRGFHNLYTLKGGVS 121 (247)
Q Consensus 87 ~Iv~YCtgG~-R~e~aa~~L~~~Gf~nV~~L~GGi~ 121 (247)
+|++.|+|.+ ||..|.++|+++. .++.+...|+.
T Consensus 24 ~VLFVCtgN~cRSpmAEal~r~~~-~~~~v~SAGt~ 58 (167)
T 2fek_A 24 NILVVCVGNICRSPTAERLLQRYH-PELKVESAGLG 58 (167)
T ss_dssp EEEEEESSSSSHHHHHHHHHHHHC-TTCEEEEEETT
T ss_pred eEEEEcCCcHHHHHHHHHHHHHhc-CCeEEEeeecC
Confidence 5999999865 8999999998764 33444444543
No 110
>2hcm_A Dual specificity protein phosphatase; structural genomics, PSI, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Mus musculus}
Probab=33.16 E-value=45 Score=25.39 Aligned_cols=25 Identities=40% Similarity=0.779 Sum_probs=17.2
Q ss_pred ceEEEEeCCC-chHH-HHHHHH-HHcCC
Q 025834 86 TDILMYCTGG-IRCD-VYSTIL-RQRGF 110 (247)
Q Consensus 86 ~~Iv~YCtgG-~R~e-~aa~~L-~~~Gf 110 (247)
.+|+++|..| .|+. .++++| ...|+
T Consensus 90 ~~VlVHC~aG~~RSg~~~~ayLm~~~~~ 117 (164)
T 2hcm_A 90 GSCLVYCKNGRSRSAAVCTAYLMRHRGH 117 (164)
T ss_dssp CEEEEEESSSSHHHHHHHHHHHHHHSCC
T ss_pred CEEEEECCCCCchHHHHHHHHHHHHhCC
Confidence 4799999999 5766 344454 45665
No 111
>2wja_A Putative acid phosphatase WZB; hydrolase; 2.50A {Escherichia coli}
Probab=33.07 E-value=31 Score=27.30 Aligned_cols=34 Identities=32% Similarity=0.462 Sum_probs=24.6
Q ss_pred eEEEEeCCCc-hHHHHHHHHHHcCCCcEEEccchHH
Q 025834 87 DILMYCTGGI-RCDVYSTILRQRGFHNLYTLKGGVS 121 (247)
Q Consensus 87 ~Iv~YCtgG~-R~e~aa~~L~~~Gf~nV~~L~GGi~ 121 (247)
+|++.|+|.+ ||..|.++|+++. .++.+...|+.
T Consensus 28 ~VLFVCtgNicRSpmAEal~r~~~-~~~~v~SAGt~ 62 (168)
T 2wja_A 28 SILVICTGNICRSPIGERLLRRLL-PSKKINSAGVG 62 (168)
T ss_dssp EEEEEESSSSSHHHHHHHHHHHHS-TTSEEEEEETT
T ss_pred EEEEEcCCcHHHHHHHHHHHHHhc-CCeEEEeeecC
Confidence 5999999865 8999999998864 33444445553
No 112
>3t38_A Arsenate reductase; low molecular weight tyrosine phosphatase fold, reduction of to arsenite, oxidoreductase; 2.20A {Corynebacterium glutamicum}
Probab=32.57 E-value=33 Score=28.35 Aligned_cols=35 Identities=17% Similarity=0.318 Sum_probs=24.3
Q ss_pred ceEEEEeCCCc-hHHHHHHHHHHcCCCcEEEccchH
Q 025834 86 TDILMYCTGGI-RCDVYSTILRQRGFHNLYTLKGGV 120 (247)
Q Consensus 86 ~~Iv~YCtgG~-R~e~aa~~L~~~Gf~nV~~L~GGi 120 (247)
.+|++.|+|.+ ||..|.++|+++.-+++.+...|+
T Consensus 82 ~~VLFVCtgN~cRSpmAEal~~~~~~~~~~v~SAGt 117 (213)
T 3t38_A 82 PQVLFICVHNAGRSQIASALLSHYAGSSVEVRSAGS 117 (213)
T ss_dssp CEEEEEESSSSSHHHHHHHHHHHHHGGGCEEEEEES
T ss_pred CEEEEECCCchhHHHHHHHHHHHhccCceEEEeccc
Confidence 46999999865 899898888876433344444443
No 113
>2gi4_A Possible phosphotyrosine protein phosphatase; low molecular weight, protein tyrosine phosphatase, bacterial phosphatase; NMR {Campylobacter jejuni}
Probab=32.52 E-value=33 Score=26.62 Aligned_cols=37 Identities=24% Similarity=0.477 Sum_probs=26.7
Q ss_pred eEEEEeCCCc-hHHHHHHHHHHc----CCC-cEEEccchHHHH
Q 025834 87 DILMYCTGGI-RCDVYSTILRQR----GFH-NLYTLKGGVSHY 123 (247)
Q Consensus 87 ~Iv~YCtgG~-R~e~aa~~L~~~----Gf~-nV~~L~GGi~~w 123 (247)
+|++.|+|.+ ||..|.++|+++ |.. ++.+...|+..|
T Consensus 3 ~VLFVC~gNicRSpmAEai~~~~~~~~gl~~~~~v~SAGt~~~ 45 (156)
T 2gi4_A 3 KILFICLGNICRSPMAEFIMKDLVKKANLEKEFFINSAGTSGE 45 (156)
T ss_dssp EEEEECSSCSSHHHHHHHHHHHHHHHHTTTTTCEEEEEBSSCS
T ss_pred EEEEEeCCCHHHHHHHHHHHHHHHHhCCCCCcEEEEeeecCCc
Confidence 5999999865 888888887653 553 466666677666
No 114
>2p6n_A ATP-dependent RNA helicase DDX41; DEAD, structural genomics, structural genomic consortium, SGC, hydrolase; 2.60A {Homo sapiens}
Probab=32.43 E-value=29 Score=27.50 Aligned_cols=34 Identities=18% Similarity=0.373 Sum_probs=29.4
Q ss_pred eEEEEeCCCchHHHHHHHHHHcCCCcEEEccchHH
Q 025834 87 DILMYCTGGIRCDVYSTILRQRGFHNLYTLKGGVS 121 (247)
Q Consensus 87 ~Iv~YCtgG~R~e~aa~~L~~~Gf~nV~~L~GGi~ 121 (247)
++|+||+.-..++.++..|...|+. +..+.|++.
T Consensus 56 ~~lVF~~~~~~~~~l~~~L~~~g~~-~~~lhg~~~ 89 (191)
T 2p6n_A 56 PVLIFAEKKADVDAIHEYLLLKGVE-AVAIHGGKD 89 (191)
T ss_dssp CEEEECSCHHHHHHHHHHHHHHTCC-EEEECTTSC
T ss_pred CEEEEECCHHHHHHHHHHHHHcCCc-EEEEeCCCC
Confidence 5999999888899999999999985 888999853
No 115
>2q05_A Late protein H1, dual specificity protein phosphatase; structural genomics, APC7320, P protein structure initiative; HET: MSE; 2.57A {Vaccinia virus WR}
Probab=31.87 E-value=31 Score=27.48 Aligned_cols=26 Identities=19% Similarity=0.317 Sum_probs=17.0
Q ss_pred ceEEEEeCCC-chHHH-HHHHH-HHcCCC
Q 025834 86 TDILMYCTGG-IRCDV-YSTIL-RQRGFH 111 (247)
Q Consensus 86 ~~Iv~YCtgG-~R~e~-aa~~L-~~~Gf~ 111 (247)
.||++.|..| .|+.. ++.+| ...|.+
T Consensus 126 ~~VlVHC~aG~~RSg~~v~~yL~~~~~~~ 154 (195)
T 2q05_A 126 EPVLVHCAAGVNRSGAMILAYLMSKNKES 154 (195)
T ss_dssp CCEEEECSSSSSHHHHHHHHHHHHHCCSS
T ss_pred CcEEEEcCCCCChHHHHHHHHHHHHhCCC
Confidence 4799999988 57553 34444 445654
No 116
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=31.73 E-value=22 Score=33.55 Aligned_cols=45 Identities=13% Similarity=0.251 Sum_probs=28.0
Q ss_pred CCCccccccCCCccccc--------c-----cccCCCCCCCc------eEEechhhhhccCCCC
Q 025834 166 ENPFATCYICSSQVREL--------R-----HRNCANLDCNL------LFLCCADCVKNLRGCC 210 (247)
Q Consensus 166 ~~~~~~C~~C~~~~~~~--------~-----~~nc~~~~C~~------~~~~c~~c~~~~~~~c 210 (247)
...-.+|..||+-..+. + .-.++-..++. ..|+|+.|...|++.|
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~kk~~~~~n~~~~mI~CD~C~~WfH~~C 72 (528)
T 3pur_A 9 PKESDRCGGCGKFTHEDDLIALEEEKKKEKEKPLMSKKKSHHHKKNDFQWIGCDSCQTWYHFLC 72 (528)
T ss_dssp CCCSCCCTTTCCCC-------------------CCSCCCTTTTTTSTTSEEECTTTCCEEEGGG
T ss_pred CCccchhhcccCCCchhhHHHHHHHhhhhhhhccccccccccCCCcCCCEEECCCCCcCCCCcC
Confidence 34467899999876542 0 12334444554 8999999998887655
No 117
>2r0b_A Serine/threonine/tyrosine-interacting protein; structural genomics, phosphatase, PSI-2, protein structure initiative; 1.60A {Homo sapiens}
Probab=31.50 E-value=42 Score=25.13 Aligned_cols=26 Identities=15% Similarity=0.233 Sum_probs=17.7
Q ss_pred ceEEEEeCCC-chHHH-HHHHHH-HcCCC
Q 025834 86 TDILMYCTGG-IRCDV-YSTILR-QRGFH 111 (247)
Q Consensus 86 ~~Iv~YCtgG-~R~e~-aa~~L~-~~Gf~ 111 (247)
.+|+++|+.| .|+.. ++++|. ..|.+
T Consensus 91 ~~vlvHC~aG~~RS~~~~~ayl~~~~~~~ 119 (154)
T 2r0b_A 91 GKVLVHGNAGISRSAAFVIAYIMETFGMK 119 (154)
T ss_dssp CCEEEECSSSSSHHHHHHHHHHHHHHTCC
T ss_pred CCEEEEcCCCCChHHHHHHHHHHHHcCCC
Confidence 3799999998 57764 445554 46653
No 118
>2l8e_A Polyhomeotic-like protein 1; DNA binding protein; NMR {Homo sapiens}
Probab=30.70 E-value=12 Score=23.85 Aligned_cols=12 Identities=17% Similarity=0.515 Sum_probs=8.9
Q ss_pred ccccccCCCccc
Q 025834 169 FATCYICSSQVR 180 (247)
Q Consensus 169 ~~~C~~C~~~~~ 180 (247)
+..|..||++..
T Consensus 18 ~~~C~~CG~~i~ 29 (49)
T 2l8e_A 18 LLKCEYCGKYAP 29 (49)
T ss_dssp EEECTTTCCEEE
T ss_pred CCcChhccCccc
Confidence 457888888775
No 119
>1yz4_A DUSP15, dual specificity phosphatase-like 15 isoform A; hydrolase; HET: BOG; 2.40A {Homo sapiens}
Probab=30.10 E-value=48 Score=25.11 Aligned_cols=26 Identities=15% Similarity=0.282 Sum_probs=17.9
Q ss_pred ceEEEEeCCC-chHH-HHHHHH-HHcCCC
Q 025834 86 TDILMYCTGG-IRCD-VYSTIL-RQRGFH 111 (247)
Q Consensus 86 ~~Iv~YCtgG-~R~e-~aa~~L-~~~Gf~ 111 (247)
.+|+++|..| .|+. .++++| ...|.+
T Consensus 85 ~~VlVHC~aG~~RSg~~~~aylm~~~~~~ 113 (160)
T 1yz4_A 85 GNCLVHSFAGISRSTTIVTAYVMTVTGLG 113 (160)
T ss_dssp CCEEEEETTSSSHHHHHHHHHHHHHHCCC
T ss_pred CeEEEECCCCCchHHHHHHHHHHHHcCCC
Confidence 4799999998 5776 344555 556653
No 120
>1xri_A AT1G05000; structural genomics, protein structure initiative, CESG for eukaryotic structural genomics, phosphoprote phosphatase; 3.30A {Arabidopsis thaliana} SCOP: c.45.1.1 PDB: 2q47_A
Probab=29.76 E-value=35 Score=25.50 Aligned_cols=26 Identities=15% Similarity=0.387 Sum_probs=18.2
Q ss_pred ceEEEEeCCCc-hHHHH-HHHHHHcCCC
Q 025834 86 TDILMYCTGGI-RCDVY-STILRQRGFH 111 (247)
Q Consensus 86 ~~Iv~YCtgG~-R~e~a-a~~L~~~Gf~ 111 (247)
.||+++|+.|. |+..+ +.+|...|++
T Consensus 93 ~~vlvHC~aG~~RTg~~~a~~l~~~g~~ 120 (151)
T 1xri_A 93 HPVLIHCKRGKHRTGCLVGCLRKLQKWC 120 (151)
T ss_dssp CSEEEECSSSSSHHHHHHHHHHHHTTBC
T ss_pred CCEEEECCCCCCHHHHHHHHHHHHhCCC
Confidence 47999999996 87654 4455566653
No 121
>1zzw_A Dual specificity protein phosphatase 10; MKP, PTP, hydrolase; 1.60A {Homo sapiens}
Probab=29.62 E-value=57 Score=24.23 Aligned_cols=25 Identities=20% Similarity=0.394 Sum_probs=17.3
Q ss_pred ceEEEEeCCC-chHHH-HHHHHH-HcCC
Q 025834 86 TDILMYCTGG-IRCDV-YSTILR-QRGF 110 (247)
Q Consensus 86 ~~Iv~YCtgG-~R~e~-aa~~L~-~~Gf 110 (247)
.+|+++|..| .|+.. ++++|. ..|.
T Consensus 84 ~~VlVHC~~G~~RSg~~~~ayl~~~~~~ 111 (149)
T 1zzw_A 84 KGLLIHCQAGVSRSATIVIAYLMKHTRM 111 (149)
T ss_dssp CEEEEECSSSSSHHHHHHHHHHHHHSCC
T ss_pred CeEEEECCCCCCHHHHHHHHHHHHHcCC
Confidence 4799999998 57664 455554 4665
No 122
>1dsz_A RAR-alpha, retinoic acid receptor alpha; RAR, nuclear receptor, protein-DNA, transcription/DNA complex; HET: DNA; 1.70A {Homo sapiens} SCOP: g.39.1.2 PDB: 1hra_A
Probab=29.07 E-value=25 Score=24.82 Aligned_cols=27 Identities=15% Similarity=0.609 Sum_probs=19.0
Q ss_pred ccccccCCCcccccccccCCCCCCCceEEechhhhhc
Q 025834 169 FATCYICSSQVRELRHRNCANLDCNLLFLCCADCVKN 205 (247)
Q Consensus 169 ~~~C~~C~~~~~~~~~~nc~~~~C~~~~~~c~~c~~~ 205 (247)
...|..|+.+.+.+.|. ++.|++|..=
T Consensus 4 ~~~C~VCg~~a~g~hyG----------v~sC~aCk~F 30 (86)
T 1dsz_A 4 YKPCFVCQDKSSGYHYG----------VSACEGCKGF 30 (86)
T ss_dssp --CCTTTCSCCCSEETT----------EECCHHHHHH
T ss_pred CCCCcEECCCccceeeC----------chhHHHHHHH
Confidence 55799999988754333 8899999653
No 123
>3o7a_A PHD finger protein 13 variant; PHF13, zinc finger, PHD domain, nuclear protein, structural structural genomics consortium, SGC, protein binding; HET: M3L; 1.67A {Homo sapiens}
Probab=28.88 E-value=25 Score=22.01 Aligned_cols=18 Identities=17% Similarity=0.517 Sum_probs=14.3
Q ss_pred ceEEechhhhhccCCCCC
Q 025834 194 LLFLCCADCVKNLRGCCC 211 (247)
Q Consensus 194 ~~~~~c~~c~~~~~~~c~ 211 (247)
...|+|+.|..-+++.|-
T Consensus 16 ~~MI~Cd~C~~W~H~~Cv 33 (52)
T 3o7a_A 16 RPMIECNECHTWIHLSCA 33 (52)
T ss_dssp CCEEECTTTCCEEETTTT
T ss_pred CCEEEcCCCCcccccccc
Confidence 568999999988887654
No 124
>4etm_A LMPTP, low molecular weight protein-tyrosine-phosphatase; dephosphorylation, hydrolase; 1.60A {Bacillus subtilis}
Probab=28.77 E-value=41 Score=26.61 Aligned_cols=38 Identities=24% Similarity=0.584 Sum_probs=26.7
Q ss_pred eEEEEeCCCc-hHHHHHHHHHH----cCCC-cEEEccchHHHHH
Q 025834 87 DILMYCTGGI-RCDVYSTILRQ----RGFH-NLYTLKGGVSHYL 124 (247)
Q Consensus 87 ~Iv~YCtgG~-R~e~aa~~L~~----~Gf~-nV~~L~GGi~~w~ 124 (247)
+|++.|+|.+ ||..|-++|++ .|+. .+.+-.-|+.+|.
T Consensus 20 kVLFVCtGNiCRSpmAE~i~r~~~~~~gl~~~~~v~SAGt~~~~ 63 (173)
T 4etm_A 20 SVLFVCLGNICRSPMAEAIFRDLAAKKGLEGKIKADSAGIGGWH 63 (173)
T ss_dssp EEEEEESSSSSHHHHHHHHHHHHHHHTTCTTTEEEEEEESSCTT
T ss_pred EEEEEeCCcchhhHHHHHHHHHHHHHcCCCCceEEeccccccCC
Confidence 6999999865 88877777754 4654 4666666776663
No 125
>1a6y_A Orphan nuclear receptor NR1D1; orphan receptor, DNA-binding, reverb, REV- ERB, transcription regulation, transcription/DNA complex; HET: DNA 5IU; 2.30A {Homo sapiens} SCOP: g.39.1.2 PDB: 1ga5_A* 1hlz_A
Probab=28.76 E-value=26 Score=25.18 Aligned_cols=29 Identities=17% Similarity=0.453 Sum_probs=20.2
Q ss_pred CCccccccCCCcccccccccCCCCCCCceEEechhhhhc
Q 025834 167 NPFATCYICSSQVRELRHRNCANLDCNLLFLCCADCVKN 205 (247)
Q Consensus 167 ~~~~~C~~C~~~~~~~~~~nc~~~~C~~~~~~c~~c~~~ 205 (247)
.....|..|+.+.+.+.|. ++.|++|..=
T Consensus 5 ~~~~~C~VCg~~a~g~hyG----------v~sC~aCk~F 33 (94)
T 1a6y_A 5 GMVLLCKVCGDVASGFHYG----------VLACEGCKGF 33 (94)
T ss_dssp ---CBCTTTSSBCCEEETT----------EEECHHHHHH
T ss_pred CCCCcCcEeCCCCcceEeC----------ccchhhhhhe
Confidence 3456899999988754333 8999999763
No 126
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=28.64 E-value=12 Score=25.36 Aligned_cols=31 Identities=19% Similarity=0.358 Sum_probs=21.4
Q ss_pred CccccccCCCcccccccccCCCCCCCceEEechhhhhccCCCC
Q 025834 168 PFATCYICSSQVRELRHRNCANLDCNLLFLCCADCVKNLRGCC 210 (247)
Q Consensus 168 ~~~~C~~C~~~~~~~~~~nc~~~~C~~~~~~c~~c~~~~~~~c 210 (247)
....|..|+++.+. ...|+|+.|...|+..|
T Consensus 17 ~~~~C~~C~~~~~~------------~~mi~CD~C~~wfH~~C 47 (75)
T 2k16_A 17 QIWICPGCNKPDDG------------SPMIGCDDCDDWYHWPC 47 (75)
T ss_dssp EEECBTTTTBCCSS------------CCEEECSSSSSEEEHHH
T ss_pred CCcCCCCCCCCCCC------------CCEEEcCCCCccccccc
Confidence 35569899987532 34788888987776543
No 127
>1wrm_A Dual specificity phosphatase 22; DSP, JNK, hydrolase; HET: MES; 1.50A {Homo sapiens}
Probab=27.74 E-value=52 Score=25.14 Aligned_cols=25 Identities=20% Similarity=0.336 Sum_probs=17.3
Q ss_pred ceEEEEeCCC-chHHH-HHHHHHH-cCC
Q 025834 86 TDILMYCTGG-IRCDV-YSTILRQ-RGF 110 (247)
Q Consensus 86 ~~Iv~YCtgG-~R~e~-aa~~L~~-~Gf 110 (247)
.+|+++|..| .|+.. ++++|.. .|+
T Consensus 84 ~~VlVHC~aG~~RSg~~~~ayLm~~~~~ 111 (165)
T 1wrm_A 84 ESCLVHCLAGVSRSVTLVIAYIMTVTDF 111 (165)
T ss_dssp CEEEEECSSSSSHHHHHHHHHHHHTSSC
T ss_pred CeEEEECCCCCChhHHHHHHHHHHHcCC
Confidence 4799999998 57765 3566544 454
No 128
>4egs_A Ribose 5-phosphate isomerase RPIB; tyrosine phosphatase, dephosphorylation, hydrolase; 2.30A {Thermoanaerobacter tengcongensis}
Probab=27.42 E-value=45 Score=26.55 Aligned_cols=37 Identities=24% Similarity=0.380 Sum_probs=24.8
Q ss_pred ceEEEEeCCCc-hHHHHHHHHHH----cCCCcEEEccchHHHH
Q 025834 86 TDILMYCTGGI-RCDVYSTILRQ----RGFHNLYTLKGGVSHY 123 (247)
Q Consensus 86 ~~Iv~YCtgG~-R~e~aa~~L~~----~Gf~nV~~L~GGi~~w 123 (247)
.+|++.|+|.+ ||..|-++|+. .| .++.+-.-|+..|
T Consensus 35 mkVLFVC~GNiCRSpmAE~l~r~~~~~~g-~~~~v~SAGt~~~ 76 (180)
T 4egs_A 35 MRVLFVCTGNTCRSPMAEGIFNAKSKALG-KDWEAKSAGVFAP 76 (180)
T ss_dssp CEEEEEESSSSSHHHHHHHHHHHHHHHTT-CCCEEEEEETTCC
T ss_pred eEEEEEeCCCcccCHHHHHHHHHHHHhcC-CceEEEEeeecCc
Confidence 46999999876 88888888754 23 2355555565544
No 129
>2esb_A Dual specificity protein phosphatase 18; alpha/beta structure, hydrolase; HET: EPE; 2.00A {Homo sapiens}
Probab=27.11 E-value=57 Score=25.68 Aligned_cols=26 Identities=19% Similarity=0.400 Sum_probs=17.7
Q ss_pred ceEEEEeCCC-chHH-HHHHHH-HHcCCC
Q 025834 86 TDILMYCTGG-IRCD-VYSTIL-RQRGFH 111 (247)
Q Consensus 86 ~~Iv~YCtgG-~R~e-~aa~~L-~~~Gf~ 111 (247)
.+|+++|..| .|+. .++++| ...|++
T Consensus 98 ~~VLVHC~aG~sRS~~vv~ayLm~~~~~s 126 (188)
T 2esb_A 98 GRTLLHCAAGVSRSAALCLAYLMKYHAMS 126 (188)
T ss_dssp CCEEEECSSSSSHHHHHHHHHHHHHSCCC
T ss_pred CEEEEECCCCCchHHHHHHHHHHHHcCCC
Confidence 3699999998 5776 345555 456653
No 130
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=27.10 E-value=28 Score=23.32 Aligned_cols=31 Identities=19% Similarity=0.574 Sum_probs=22.8
Q ss_pred CccccccCCCcccccccccCCCCCCCceEEechhhhhccCCCCC
Q 025834 168 PFATCYICSSQVRELRHRNCANLDCNLLFLCCADCVKNLRGCCC 211 (247)
Q Consensus 168 ~~~~C~~C~~~~~~~~~~nc~~~~C~~~~~~c~~c~~~~~~~c~ 211 (247)
....| .|+++.+ ..+.|+|+.|...+++.|-
T Consensus 18 ~~~~C-iC~~~~~------------~~~MIqCd~C~~WfH~~Cv 48 (68)
T 3o70_A 18 GLVTC-FCMKPFA------------GRPMIECNECHTWIHLSCA 48 (68)
T ss_dssp TCCCS-TTCCCCT------------TCCEEECTTTCCEEETTTT
T ss_pred CceEe-ECCCcCC------------CCCEEECCCCCcccccccc
Confidence 35567 8988743 3468999999988887654
No 131
>2hxp_A Dual specificity protein phosphatase 9; human phosphatase, structural genomics, PSI-2, protein structure initiative; 1.83A {Homo sapiens} PDB: 3lj8_A 1mkp_A
Probab=26.63 E-value=63 Score=24.38 Aligned_cols=25 Identities=20% Similarity=0.240 Sum_probs=17.3
Q ss_pred ceEEEEeCCC-chHH-HHHHHH-HHcCC
Q 025834 86 TDILMYCTGG-IRCD-VYSTIL-RQRGF 110 (247)
Q Consensus 86 ~~Iv~YCtgG-~R~e-~aa~~L-~~~Gf 110 (247)
.+|+++|..| .|+. .++++| +..|+
T Consensus 86 ~~VlVHC~~G~~RS~~vv~ayLm~~~~~ 113 (155)
T 2hxp_A 86 CGVLVHSLAGVSRSVTVTVAYLMQKLHL 113 (155)
T ss_dssp CEEEEECSSSSSHHHHHHHHHHHHHHTC
T ss_pred CcEEEECCCCCchhHHHHHHHHHHHcCC
Confidence 4799999998 5766 444555 44565
No 132
>2dip_A Zinc finger SWIM domain-containing protein 2; ZZ domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.44.1.6
Probab=26.32 E-value=29 Score=25.14 Aligned_cols=33 Identities=18% Similarity=0.653 Sum_probs=23.9
Q ss_pred cccccCCC-cccccccccCCCCCCCceEEechhhhhcc
Q 025834 170 ATCYICSS-QVRELRHRNCANLDCNLLFLCCADCVKNL 206 (247)
Q Consensus 170 ~~C~~C~~-~~~~~~~~nc~~~~C~~~~~~c~~c~~~~ 206 (247)
..|..|++ |..-.|| .|. .|.. +-.|+.|....
T Consensus 32 v~Cd~C~~~pI~G~Ry-kC~--~C~d-~DLC~~C~~~~ 65 (98)
T 2dip_A 32 IPCNNCKQFPIEGKCY-KCT--ECIE-YHLCQECFDSY 65 (98)
T ss_dssp CCCSSSCCSSCCSCEE-EES--SSSS-CEEEHHHHHTT
T ss_pred CCCcCCCCCCcccCeE-ECC--CCCC-ccHHHHHHccC
Confidence 68999996 6755554 365 6665 78899998764
No 133
>2e5r_A Dystrobrevin alpha; ZZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=25.35 E-value=37 Score=22.38 Aligned_cols=33 Identities=27% Similarity=0.711 Sum_probs=23.9
Q ss_pred cccccCCC-cccccccccCCCCCCCceEEechhhhhcc
Q 025834 170 ATCYICSS-QVRELRHRNCANLDCNLLFLCCADCVKNL 206 (247)
Q Consensus 170 ~~C~~C~~-~~~~~~~~nc~~~~C~~~~~~c~~c~~~~ 206 (247)
..|..|++ |..-.|+ .|. .|.. +-.|..|..+.
T Consensus 12 ~~Cd~C~~~pi~G~Ry-kC~--~C~d-~DLC~~C~~~g 45 (63)
T 2e5r_A 12 VECSYCHSESMMGFRY-RCQ--QCHN-YQLCQDCFWRG 45 (63)
T ss_dssp SCCSSSCCCSSCSCEE-EES--SCSS-CEECHHHHHHC
T ss_pred CCCcCCCCcceecceE-Eec--CCCC-chhHHHHHhCC
Confidence 67999996 5765554 475 6655 78899998764
No 134
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=24.88 E-value=16 Score=22.67 Aligned_cols=27 Identities=19% Similarity=0.565 Sum_probs=18.1
Q ss_pred ccccCCCcccccccccCCCCCCCceEEechhhhhccCCC
Q 025834 171 TCYICSSQVRELRHRNCANLDCNLLFLCCADCVKNLRGC 209 (247)
Q Consensus 171 ~C~~C~~~~~~~~~~nc~~~~C~~~~~~c~~c~~~~~~~ 209 (247)
.|..|+++-+. ..+|.|+.|...|+-.
T Consensus 2 ~C~vC~~~~~~------------~~ll~Cd~C~~~~H~~ 28 (51)
T 1f62_A 2 RCKVCRKKGED------------DKLILCDECNKAFHLF 28 (51)
T ss_dssp CCTTTCCSSCC------------SCCEECTTTCCEECHH
T ss_pred CCCCCCCCCCC------------CCEEECCCCChhhCcc
Confidence 47777766421 2478889998877744
No 135
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=24.58 E-value=46 Score=21.88 Aligned_cols=27 Identities=22% Similarity=0.774 Sum_probs=18.7
Q ss_pred ccccccCCCcccccccccCCCCCCCceEEechhhhhccCCCC
Q 025834 169 FATCYICSSQVRELRHRNCANLDCNLLFLCCADCVKNLRGCC 210 (247)
Q Consensus 169 ~~~C~~C~~~~~~~~~~nc~~~~C~~~~~~c~~c~~~~~~~c 210 (247)
-..|..|+..- .+|.|+.|...|+-.|
T Consensus 8 ~~~C~vC~~~g---------------~ll~CD~C~~~fH~~C 34 (66)
T 1xwh_A 8 EDECAVCRDGG---------------ELICCDGCPRAFHLAC 34 (66)
T ss_dssp CCSBSSSSCCS---------------SCEECSSCCCEECTTT
T ss_pred CCCCccCCCCC---------------CEEEcCCCChhhcccc
Confidence 45688888531 2678888888777554
No 136
>3ohg_A Uncharacterized protein from DUF2233 family; structural genomics, unknown function, joint center for STRU genomics, JCSG; HET: MSE; 1.80A {Bacteroides ovatus}
Probab=24.51 E-value=85 Score=27.02 Aligned_cols=26 Identities=27% Similarity=0.447 Sum_probs=22.1
Q ss_pred CchHHHHHHHHHHcCCCcEEEccchH
Q 025834 95 GIRCDVYSTILRQRGFHNLYTLKGGV 120 (247)
Q Consensus 95 G~R~e~aa~~L~~~Gf~nV~~L~GGi 120 (247)
|..-..++.+|+++|..+...||||-
T Consensus 218 G~tl~ela~~~~~lG~~~AlnLDGGg 243 (285)
T 3ohg_A 218 GLTLPHLATMMKAVGCYNAINLDGGG 243 (285)
T ss_dssp CBCHHHHHHHHHHHTCSEEEECCCGG
T ss_pred CCCHHHHHHHHHHcCCCeEEECCCCc
Confidence 34557789999999999999999984
No 137
>1ovx_A ATP-dependent CLP protease ATP-binding subunit CL; treble CLEF zinc finger, homodimer, metal binding protein; NMR {Escherichia coli} SCOP: g.39.1.11
Probab=24.44 E-value=31 Score=23.39 Aligned_cols=31 Identities=26% Similarity=0.537 Sum_probs=20.6
Q ss_pred cccccCCCcccccccccCCCCCCCceEEechhhhhc
Q 025834 170 ATCYICSSQVRELRHRNCANLDCNLLFLCCADCVKN 205 (247)
Q Consensus 170 ~~C~~C~~~~~~~~~~nc~~~~C~~~~~~c~~c~~~ 205 (247)
..|+.||++.++.+.- =+.+ -+.+|++|.+.
T Consensus 19 ~~CSFCGK~e~eV~~L-IaGp----gvyICdeCI~~ 49 (67)
T 1ovx_A 19 LYCSFCGKSQHEVRKL-IAGP----SVYICDECVDL 49 (67)
T ss_dssp CCCTTTCCCTTTSSSE-EECS----SCEEEHHHHHH
T ss_pred cEecCCCCCHHHHccc-CCCC----CCChhHHHHHH
Confidence 4899999998764311 1222 16799999864
No 138
>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=24.28 E-value=48 Score=22.56 Aligned_cols=28 Identities=14% Similarity=0.507 Sum_probs=17.3
Q ss_pred CCCccccccCCCcccccccccCCCCCCCc
Q 025834 166 ENPFATCYICSSQVRELRHRNCANLDCNL 194 (247)
Q Consensus 166 ~~~~~~C~~C~~~~~~~~~~nc~~~~C~~ 194 (247)
......| .|+.+.+.-.++-|-|+.|..
T Consensus 13 ~~~~~~C-iC~~~~~~g~MI~CD~~~C~~ 40 (78)
T 1wew_A 13 PEIKVRC-VCGNSLETDSMIQCEDPRCHV 40 (78)
T ss_dssp CCCCCCC-SSCCCCCCSCEEECSSTTTCC
T ss_pred CCCCEEe-ECCCcCCCCCEEEECCccCCc
Confidence 3456678 699984332356666666655
No 139
>2ds5_A CLPX, ATP-dependent CLP protease ATP-binding subunit CLPX; treble cleft zinc finger, metal binding protein, protein binding; HET: PG4; 1.50A {Escherichia coli} SCOP: g.39.1.11 PDB: 2ds6_A 2ds8_A 2ds7_A
Probab=24.02 E-value=38 Score=21.55 Aligned_cols=31 Identities=26% Similarity=0.537 Sum_probs=20.4
Q ss_pred cccccCCCcccccccccCCCCCCCceEEechhhhhc
Q 025834 170 ATCYICSSQVRELRHRNCANLDCNLLFLCCADCVKN 205 (247)
Q Consensus 170 ~~C~~C~~~~~~~~~~nc~~~~C~~~~~~c~~c~~~ 205 (247)
.+|..||++.++.+.- =+.+ -+.+|++|.+.
T Consensus 12 ~~CSFCGk~~~ev~~L-IaGp----gv~IC~eCi~~ 42 (51)
T 2ds5_A 12 LYCSFCGKSQHEVRKL-IAGP----SVYICDECVDL 42 (51)
T ss_dssp CBCTTTCCBTTTSSCE-EECS----SCEEEHHHHHH
T ss_pred cEecCCCCCHHHhccc-CCCC----CCEehHHHHHH
Confidence 4899999998764321 1222 16789999763
No 140
>3cbb_A HNF-4-alpha, hepatocyte nuclear factor 4-alpha, DNA binding domain, nuclear; zinc finger; 2.00A {Homo sapiens}
Probab=23.85 E-value=36 Score=23.51 Aligned_cols=25 Identities=20% Similarity=0.440 Sum_probs=18.5
Q ss_pred ccccCCCcccccccccCCCCCCCceEEechhhhhc
Q 025834 171 TCYICSSQVRELRHRNCANLDCNLLFLCCADCVKN 205 (247)
Q Consensus 171 ~C~~C~~~~~~~~~~nc~~~~C~~~~~~c~~c~~~ 205 (247)
.|..|+.+.+.+.|. ++.|++|..=
T Consensus 2 ~C~VCg~~a~g~hyG----------v~sC~aCk~F 26 (78)
T 3cbb_A 2 LCAICGDRATGKHYG----------ASSCDGCKGF 26 (78)
T ss_dssp BCTTTSSBCCSEETT----------EECCHHHHHH
T ss_pred CCeEeCCCCCceEeC----------Ccchhhhcee
Confidence 589999887654333 8899999753
No 141
>1cit_A NGFI-B, protein (orphan nuclear receptor NGFI-B); early immediate response gene product, transcription factor, monomeric protein-DNA complex; HET: DNA; 2.70A {Rattus norvegicus} SCOP: g.39.1.2
Probab=23.50 E-value=38 Score=24.00 Aligned_cols=25 Identities=16% Similarity=0.436 Sum_probs=18.2
Q ss_pred ccccCCCcccccccccCCCCCCCceEEechhhhhc
Q 025834 171 TCYICSSQVRELRHRNCANLDCNLLFLCCADCVKN 205 (247)
Q Consensus 171 ~C~~C~~~~~~~~~~nc~~~~C~~~~~~c~~c~~~ 205 (247)
.|..|+.+.+.+.|. ++.|++|..=
T Consensus 2 ~C~VCg~~a~g~hyG----------v~sC~aCk~F 26 (89)
T 1cit_A 2 RCAVCGDNASCQHYG----------VRTCEGCKGF 26 (89)
T ss_dssp CCSSSCCCCCEEETT----------EEECHHHHHH
T ss_pred CCeEeCCCCcceEeC----------ccchhhhhhh
Confidence 589999887654333 8889999653
No 142
>3f81_A Dual specificity protein phosphatase 3; hydrolase, protein dual-specificity phosphatase, inhibitor; HET: STT; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1vhr_A* 1j4x_A*
Probab=23.21 E-value=63 Score=24.93 Aligned_cols=25 Identities=20% Similarity=0.380 Sum_probs=17.9
Q ss_pred ceEEEEeCCCc-hHHH-HHHHH-HHcCC
Q 025834 86 TDILMYCTGGI-RCDV-YSTIL-RQRGF 110 (247)
Q Consensus 86 ~~Iv~YCtgG~-R~e~-aa~~L-~~~Gf 110 (247)
.+|++.|..|+ |+.. ++++| ...|+
T Consensus 116 ~~VlVHC~~G~~RSg~~v~ayLm~~~~~ 143 (183)
T 3f81_A 116 GRVLVHCREGYSRSPTLVIAYLMMRQKM 143 (183)
T ss_dssp CCEEEECSSSSSHHHHHHHHHHHHHHCC
T ss_pred CeEEEECCCCcchHHHHHHHHHHHHhCC
Confidence 37999999986 7654 55555 45665
No 143
>1kb2_A Vitamin D3 receptor; VDR, nuclear receptor, protein-DNA complex, transcription/DNA complex; 2.70A {Homo sapiens} SCOP: g.39.1.2 PDB: 1kb4_A 1kb6_A 1ynw_A
Probab=23.01 E-value=37 Score=25.09 Aligned_cols=27 Identities=15% Similarity=0.477 Sum_probs=19.5
Q ss_pred ccccccCCCcccccccccCCCCCCCceEEechhhhhc
Q 025834 169 FATCYICSSQVRELRHRNCANLDCNLLFLCCADCVKN 205 (247)
Q Consensus 169 ~~~C~~C~~~~~~~~~~nc~~~~C~~~~~~c~~c~~~ 205 (247)
...|..|+.+.+.+.|. ++.|++|..=
T Consensus 6 ~~~C~VCg~~a~g~hyG----------v~sC~aCk~F 32 (110)
T 1kb2_A 6 PRICGVCGDRATGFHFN----------AMTCEGCKGF 32 (110)
T ss_dssp -CBCTTTCSBCCSEETT----------EECCHHHHHH
T ss_pred CCCCcEeCCCCCceEeC----------chhHhhhhhh
Confidence 46799999887654333 8899999653
No 144
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=22.46 E-value=41 Score=23.58 Aligned_cols=31 Identities=16% Similarity=0.486 Sum_probs=21.4
Q ss_pred cccccCCCcccccccccCCCCCCCceEEechhhhhccCCCC
Q 025834 170 ATCYICSSQVRELRHRNCANLDCNLLFLCCADCVKNLRGCC 210 (247)
Q Consensus 170 ~~C~~C~~~~~~~~~~nc~~~~C~~~~~~c~~c~~~~~~~c 210 (247)
..|..|+...+.. ...+|.|+.|...|+-.|
T Consensus 17 ~~C~vC~~~~~~~----------~~~ll~CD~C~~~yH~~C 47 (88)
T 1wev_A 17 LACVVCRQMTVAS----------GNQLVECQECHNLYHQDC 47 (88)
T ss_dssp CSCSSSCCCCCCT----------TCCEEECSSSCCEEETTT
T ss_pred CcCCCCCCCCCCC----------CCceEECCCCCCeEcCcc
Confidence 4688898775421 123888999988887655
No 145
>2ebl_A COUP transcription factor 1; DNA-binding, metal-binding, nuclear protein, receptor, transcription regulation, zinc, EAR3, erbal3 tfcoup1; NMR {Homo sapiens}
Probab=22.07 E-value=53 Score=23.24 Aligned_cols=28 Identities=14% Similarity=0.405 Sum_probs=20.6
Q ss_pred ccccccCCCcccccccccCCCCCCCceEEechhhhhcc
Q 025834 169 FATCYICSSQVRELRHRNCANLDCNLLFLCCADCVKNL 206 (247)
Q Consensus 169 ~~~C~~C~~~~~~~~~~nc~~~~C~~~~~~c~~c~~~~ 206 (247)
...|..|+.+.+.+.|. ++.|+.|+.=|
T Consensus 7 ~~~C~VCg~~a~g~hyG----------v~sC~aCk~FF 34 (89)
T 2ebl_A 7 GIECVVCGDKSSGKHYG----------QFTCEGCKSFF 34 (89)
T ss_dssp SCBCTTTCSBCCSEETT----------EECCHHHHHHH
T ss_pred CCCCcEeCCCCcceEeC----------chhhHHhhhhh
Confidence 45799999987754333 88999997643
No 146
>2wgp_A Dual specificity protein phosphatase 14; MKP6, DUSP14, hydrolase, dual specifici phosphatase; 1.88A {Homo sapiens}
Probab=21.87 E-value=76 Score=24.99 Aligned_cols=25 Identities=16% Similarity=0.357 Sum_probs=16.9
Q ss_pred ceEEEEeCCC-chHH-HHHHH-HHHcCC
Q 025834 86 TDILMYCTGG-IRCD-VYSTI-LRQRGF 110 (247)
Q Consensus 86 ~~Iv~YCtgG-~R~e-~aa~~-L~~~Gf 110 (247)
.+|+++|..| .|+. .++++ |...|+
T Consensus 104 ~~VlVHC~aG~~RSgtvv~ayLm~~~~~ 131 (190)
T 2wgp_A 104 GATLVHCAAGVSRSATLCIAYLMKFHNV 131 (190)
T ss_dssp CCEEEECSSSSSHHHHHHHHHHHHHHCC
T ss_pred CCEEEECCCCCCHHHHHHHHHHHHHcCC
Confidence 3799999988 5765 34444 455665
No 147
>2i4i_A ATP-dependent RNA helicase DDX3X; DEAD, structural genomics, SGC, structural GE consortium, hydrolase; HET: AMP; 2.20A {Homo sapiens}
Probab=21.84 E-value=74 Score=27.46 Aligned_cols=35 Identities=17% Similarity=0.294 Sum_probs=30.0
Q ss_pred ceEEEEeCCCchHHHHHHHHHHcCCCcEEEccchHH
Q 025834 86 TDILMYCTGGIRCDVYSTILRQRGFHNLYTLKGGVS 121 (247)
Q Consensus 86 ~~Iv~YCtgG~R~e~aa~~L~~~Gf~nV~~L~GGi~ 121 (247)
.++++||++-..++.++.+|.+.|+. +..+.|++.
T Consensus 277 ~~~lVf~~~~~~~~~l~~~L~~~~~~-~~~~h~~~~ 311 (417)
T 2i4i_A 277 SLTLVFVETKKGADSLEDFLYHEGYA-CTSIHGDRS 311 (417)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHTTCC-EEEECTTSC
T ss_pred CeEEEEECCHHHHHHHHHHHHHCCCC-eeEecCCCC
Confidence 36999999877899999999999985 888999864
No 148
>1lv3_A Hypothetical protein YACG; zinc finger, rubredoxin knuckle, C4 tetrahedral Zn+2, antiparallel beta strand and alpha helix, NESG project; NMR {Escherichia coli} SCOP: g.39.1.9
Probab=21.71 E-value=35 Score=23.16 Aligned_cols=37 Identities=16% Similarity=0.223 Sum_probs=22.6
Q ss_pred CccccccCCCcccccccccCCCCCCCceEEechhhhhccCCCCCccccccccCCCC
Q 025834 168 PFATCYICSSQVRELRHRNCANLDCNLLFLCCADCVKNLRGCCCLNCTTAPQRRPV 223 (247)
Q Consensus 168 ~~~~C~~C~~~~~~~~~~nc~~~~C~~~~~~c~~c~~~~~~~c~~~c~~~~~~~~~ 223 (247)
....|..|++|..- +.. ..+.-+||+-|+...-.|..
T Consensus 8 ~~~~CP~Cgkp~~W-~~~------------------~~~rPFCSeRCr~iDLg~Wa 44 (68)
T 1lv3_A 8 ITVNCPTCGKTVVW-GEI------------------SPFRPFCSKRCQLIDLGEWA 44 (68)
T ss_dssp CEEECTTTCCEEEC-SSS------------------SSCCSSSSHHHHHHHHSCSS
T ss_pred CcCcCCCCCCcccc-ccc------------------CCCCcccCHHHHhhhHHHHh
Confidence 35578888877641 100 34566899999976544433
No 149
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=21.50 E-value=17 Score=28.67 Aligned_cols=11 Identities=27% Similarity=0.600 Sum_probs=8.3
Q ss_pred ccccccCCCccc
Q 025834 169 FATCYICSSQVR 180 (247)
Q Consensus 169 ~~~C~~C~~~~~ 180 (247)
...| .|+.|.+
T Consensus 8 ~~~C-~C~~~~~ 18 (174)
T 2ri7_A 8 KLYC-ICKTPED 18 (174)
T ss_dssp CEET-TTTEECC
T ss_pred CcEe-eCCCCCC
Confidence 4578 9998864
No 150
>1hcq_A Protein (estrogen receptor); protein-DNA complex, complexed with drug, transcription/DNA complex; HET: DNA; 2.40A {Homo sapiens} SCOP: g.39.1.2 PDB: 1hcp_A 4aa6_A
Probab=21.33 E-value=51 Score=23.03 Aligned_cols=28 Identities=14% Similarity=0.415 Sum_probs=20.6
Q ss_pred ccccccCCCcccccccccCCCCCCCceEEechhhhhcc
Q 025834 169 FATCYICSSQVRELRHRNCANLDCNLLFLCCADCVKNL 206 (247)
Q Consensus 169 ~~~C~~C~~~~~~~~~~nc~~~~C~~~~~~c~~c~~~~ 206 (247)
...|..|+.+.+.+.|. ++.|++|..=|
T Consensus 4 ~~~C~VCg~~a~g~hyG----------v~sC~aCk~FF 31 (84)
T 1hcq_A 4 TRYCAVCNDYASGYHYG----------VWSCEGCKAFF 31 (84)
T ss_dssp CCBCTTTCSBCCEEETT----------EEECHHHHHHH
T ss_pred CCcCcEECCCCCCeeeC----------ccchHHhhhhh
Confidence 35799999988754333 89999997643
No 151
>2yjt_D ATP-dependent RNA helicase SRMB, regulator of ribonuclease activity A; hydrolase inhibitor-hydrolase complex, DEAD box RNA helicase; 2.90A {Escherichia coli}
Probab=26.83 E-value=20 Score=27.58 Aligned_cols=35 Identities=17% Similarity=0.301 Sum_probs=29.7
Q ss_pred eEEEEeCCCchHHHHHHHHHHcCCCcEEEccchHHH
Q 025834 87 DILMYCTGGIRCDVYSTILRQRGFHNLYTLKGGVSH 122 (247)
Q Consensus 87 ~Iv~YCtgG~R~e~aa~~L~~~Gf~nV~~L~GGi~~ 122 (247)
++|+||+.-..++.++..|...|+. +..+.|++..
T Consensus 32 ~~iVF~~~~~~~~~l~~~L~~~~~~-~~~~~g~~~~ 66 (170)
T 2yjt_D 32 RSIVFVRKRERVHELANWLREAGIN-NCYLEGEMVQ 66 (170)
Confidence 5899999888899999999999984 7888888754
No 152
>1z2q_A LM5-1; membrane protein, FYVE domain, zinc-finger; NMR {Leishmania major}
Probab=21.27 E-value=95 Score=21.33 Aligned_cols=38 Identities=18% Similarity=0.622 Sum_probs=24.2
Q ss_pred CCCCCccccccCCCcccccc-cccCCCCCCCceEEechhhhhc
Q 025834 164 VPENPFATCYICSSQVRELR-HRNCANLDCNLLFLCCADCVKN 205 (247)
Q Consensus 164 ~~~~~~~~C~~C~~~~~~~~-~~nc~~~~C~~~~~~c~~c~~~ 205 (247)
+++.....|..|+++.+.++ ...|. .|.. +.|..|...
T Consensus 16 ~pd~~~~~C~~C~~~Fs~~~RrHHCR--~CG~--v~C~~Cs~~ 54 (84)
T 1z2q_A 16 QEDEDAPACNGCGCVFTTTVRRHHCR--NCGY--VLCGDCSRH 54 (84)
T ss_dssp CCTTTCCBCTTTCCBCCTTSCCEECT--TTCC--EECTGGGCC
T ss_pred ccCCCCCCCcCcCCccccchhccccc--CCCc--EEChHHhCC
Confidence 34556789999999987542 23454 3443 567777543
No 153
>1e7l_A GP49, recombination endonuclease VII; resolvase, holliday junction, DNAse; HET: SO4; 1.32A {Bacteriophage T4} SCOP: a.140.4.1 d.4.1.5 PDB: 2qnc_A* 1en7_A 1e7d_A 2qnf_A*
Probab=20.94 E-value=41 Score=26.58 Aligned_cols=37 Identities=19% Similarity=0.284 Sum_probs=21.0
Q ss_pred ccccccCCCcccccc--------cccCCCCCCCceEEechhhhhc
Q 025834 169 FATCYICSSQVRELR--------HRNCANLDCNLLFLCCADCVKN 205 (247)
Q Consensus 169 ~~~C~~C~~~~~~~~--------~~nc~~~~C~~~~~~c~~c~~~ 205 (247)
-+.|..|+.|.+... |.-|.....+..-|.|..|-..
T Consensus 20 ~g~C~IC~~~l~~~~~~~~vDHdH~~~g~~tG~VRGlLC~~CN~~ 64 (157)
T 1e7l_A 20 NGKCLICQRELNPDVQANHLDHDHELNGPKAGKVRGLLCNLCDAA 64 (157)
T ss_dssp TTBCTTTCCBCCSSGGGSEEEECCCCSSTTTTBEEEEECHHHHHH
T ss_pred CCcCcccCCccccccccccccCCCCCCCCCCCcchhhccHhHhch
Confidence 578999999854211 1112222234556777777553
No 154
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=20.88 E-value=56 Score=21.14 Aligned_cols=28 Identities=25% Similarity=0.731 Sum_probs=19.5
Q ss_pred ccccccCCCcccccccccCCCCCCCceEEechhhhhccCCCCC
Q 025834 169 FATCYICSSQVRELRHRNCANLDCNLLFLCCADCVKNLRGCCC 211 (247)
Q Consensus 169 ~~~C~~C~~~~~~~~~~nc~~~~C~~~~~~c~~c~~~~~~~c~ 211 (247)
...|..|+..- .+|.|+.|...|+-.|-
T Consensus 9 ~~~C~vC~~~g---------------~ll~Cd~C~~~fH~~Cl 36 (61)
T 1mm2_A 9 MEFCRVCKDGG---------------ELLCCDTCPSSYHIHCL 36 (61)
T ss_dssp CSSCTTTCCCS---------------SCBCCSSSCCCBCSSSS
T ss_pred CCcCCCCCCCC---------------CEEEcCCCCHHHccccc
Confidence 45688888531 26888889888876653
No 155
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.87 E-value=46 Score=23.57 Aligned_cols=29 Identities=28% Similarity=0.608 Sum_probs=19.8
Q ss_pred cccccCCCcccccccccCCCCCCCceEEechhhhhccCCCC
Q 025834 170 ATCYICSSQVRELRHRNCANLDCNLLFLCCADCVKNLRGCC 210 (247)
Q Consensus 170 ~~C~~C~~~~~~~~~~nc~~~~C~~~~~~c~~c~~~~~~~c 210 (247)
..|..|+..-+. ..+|.|+.|...|+-.|
T Consensus 17 ~~C~vC~~~~~~------------~~ll~CD~C~~~~H~~C 45 (92)
T 2e6r_A 17 YICQVCSRGDED------------DKLLFCDGCDDNYHIFC 45 (92)
T ss_dssp CCCSSSCCSGGG------------GGCEECTTTCCEECSSS
T ss_pred CCCccCCCcCCC------------CCEEEcCCCCchhcccc
Confidence 458888876431 24788888887776554
No 156
>3s4o_A Protein tyrosine phosphatase-like protein; structural genomics, medical structural genomics of pathogen protozoa, MSGPP, unknown function; HET: MSE EPE; 2.30A {Leishmania major}
Probab=20.61 E-value=1.2e+02 Score=22.60 Aligned_cols=26 Identities=19% Similarity=0.346 Sum_probs=17.8
Q ss_pred ceEEEEeCCCc-hHH-HHHHHHHHc-CCC
Q 025834 86 TDILMYCTGGI-RCD-VYSTILRQR-GFH 111 (247)
Q Consensus 86 ~~Iv~YCtgG~-R~e-~aa~~L~~~-Gf~ 111 (247)
.||++.|..|. |+. .++.+|... |++
T Consensus 110 ~~vlVHC~aG~~RTg~~~a~~L~~~~~~~ 138 (167)
T 3s4o_A 110 PTIGVHCVAGLGRAPILVALALVEYGNVS 138 (167)
T ss_dssp CEEEEECSSSSSHHHHHHHHHHHHTTCCC
T ss_pred CcEEEECCCCCCHHHHHHHHHHHHhCCCC
Confidence 48999999885 654 455566555 653
No 157
>2v1x_A ATP-dependent DNA helicase Q1; DNA strand annealing, mismatch repair, nucleotide-binding, DNA-binding, polymorphism, nuclear protein, ATPase; HET: ADP; 2.00A {Homo sapiens} PDB: 2wwy_A*
Probab=20.40 E-value=65 Score=30.42 Aligned_cols=35 Identities=14% Similarity=0.304 Sum_probs=30.5
Q ss_pred ceEEEEeCCCchHHHHHHHHHHcCCCcEEEccchHH
Q 025834 86 TDILMYCTGGIRCDVYSTILRQRGFHNLYTLKGGVS 121 (247)
Q Consensus 86 ~~Iv~YCtgG~R~e~aa~~L~~~Gf~nV~~L~GGi~ 121 (247)
.++|+||.+-..++.++..|...|+. +..+.||+.
T Consensus 268 ~~~IVf~~sr~~~e~la~~L~~~g~~-~~~~h~~l~ 302 (591)
T 2v1x_A 268 QSGIIYCFSQKDSEQVTVSLQNLGIH-AGAYHANLE 302 (591)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHTTCC-EEEECTTSC
T ss_pred CCeEEEeCcHHHHHHHHHHHHHCCCC-EEEecCCCC
Confidence 36999999877899999999999984 899999973
No 158
>2oud_A Dual specificity protein phosphatase 10; A central five-stranded B-sheet, hydrolase; 2.80A {Homo sapiens}
Probab=20.09 E-value=87 Score=24.18 Aligned_cols=25 Identities=20% Similarity=0.394 Sum_probs=17.3
Q ss_pred ceEEEEeCCC-chHHH-HHHHHH-HcCC
Q 025834 86 TDILMYCTGG-IRCDV-YSTILR-QRGF 110 (247)
Q Consensus 86 ~~Iv~YCtgG-~R~e~-aa~~L~-~~Gf 110 (247)
.+|+++|+.| .|+.. ++++|. ..|+
T Consensus 88 ~~VlVHC~aG~~RSg~~v~ayLm~~~~~ 115 (177)
T 2oud_A 88 KGLLIHCQAGVSRSATIVIAYLMKHTRM 115 (177)
T ss_dssp CEEEEECSSSSSHHHHHHHHHHHHTSCC
T ss_pred CcEEEEcCCCCCchHHHHHHHHHHHcCC
Confidence 4799999988 57664 455555 4565
No 159
>3i32_A Heat resistant RNA dependent ATPase; RNA helicase, dimer, RNA recognition motif, ATP-BIND helicase, nucleotide-binding; 2.80A {Thermus thermophilus}
Probab=20.07 E-value=49 Score=28.42 Aligned_cols=33 Identities=12% Similarity=0.188 Sum_probs=28.6
Q ss_pred eEEEEeCCCchHHHHHHHHHHcCCCcEEEccchH
Q 025834 87 DILMYCTGGIRCDVYSTILRQRGFHNLYTLKGGV 120 (247)
Q Consensus 87 ~Iv~YCtgG~R~e~aa~~L~~~Gf~nV~~L~GGi 120 (247)
++++||++-..++.++..|...|+. +..|.|++
T Consensus 30 ~~LVF~~t~~~~~~l~~~L~~~g~~-~~~lhg~l 62 (300)
T 3i32_A 30 RAMVFTRTKAETEEIAQGLLRLGHP-AQALHGDM 62 (300)
T ss_dssp SEEEECSSHHHHHHHHHHHHTTTCC-EEEECSCC
T ss_pred CEEEEECCHHHHHHHHHHHHhCCCC-EEEEeCCC
Confidence 5999999877788999999999985 88899985
No 160
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2
Probab=20.06 E-value=19 Score=24.49 Aligned_cols=27 Identities=30% Similarity=0.821 Sum_probs=17.4
Q ss_pred ccccccCCCcccccccccCCCCCCCceEEechhhhhccCC
Q 025834 169 FATCYICSSQVRELRHRNCANLDCNLLFLCCADCVKNLRG 208 (247)
Q Consensus 169 ~~~C~~C~~~~~~~~~~nc~~~~C~~~~~~c~~c~~~~~~ 208 (247)
...| .|++|.+ ....|+|+.|...|++
T Consensus 16 ~~~C-~C~~~~~------------~~~MI~Cd~C~~WfH~ 42 (76)
T 1wem_A 16 ALYC-ICRQPHN------------NRFMICCDRCEEWFHG 42 (76)
T ss_dssp CCCS-TTCCCCC------------SSCEEECSSSCCEEEH
T ss_pred CCEE-ECCCccC------------CCCEEEeCCCCCcEeC
Confidence 3556 7998864 1357777777766554
No 161
>2han_A Protein ultraspiracle; transcription regulation, transcription factor, DNA-binding, nuclear protein, nuclear receptor, zinc finger; 1.95A {Drosophila melanogaster} SCOP: g.39.1.2
Probab=20.04 E-value=50 Score=23.57 Aligned_cols=28 Identities=18% Similarity=0.409 Sum_probs=20.5
Q ss_pred CccccccCCCcccccccccCCCCCCCceEEechhhhhc
Q 025834 168 PFATCYICSSQVRELRHRNCANLDCNLLFLCCADCVKN 205 (247)
Q Consensus 168 ~~~~C~~C~~~~~~~~~~nc~~~~C~~~~~~c~~c~~~ 205 (247)
....|..|+.+.+.+.|. ++.|++|..=
T Consensus 9 ~~~~C~VCgd~a~g~hyG----------v~sC~aCk~F 36 (93)
T 2han_A 9 SKHLCSICGDRASGKHYG----------VYSCEGCKGF 36 (93)
T ss_dssp -CCBCTTTCSBCCEEETT----------EEECHHHHHH
T ss_pred CCCCCcEeCCCCcCeecC----------cchhHHHHHH
Confidence 356799999988754333 8999999653
Done!