Query 025836
Match_columns 247
No_of_seqs 116 out of 141
Neff 5.9
Searched_HMMs 29240
Date Mon Mar 25 18:39:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025836.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025836hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3a6p_A Exportin-5; exportin-5, 100.0 1E-33 3.6E-38 296.1 12.3 204 1-207 957-1167(1204)
2 3m1i_C Exportin-1; heat repeat 95.7 0.17 5.9E-06 51.7 14.8 136 65-200 844-1007(1049)
3 2x1g_F Cadmus; transport prote 95.0 0.12 4.1E-06 52.0 10.8 131 68-200 827-966 (971)
4 2x19_B Importin-13; nuclear tr 94.6 0.075 2.6E-06 53.2 7.9 131 68-200 815-954 (963)
5 3ibv_A Exportin-T; karyopherin 76.5 4.8 0.00016 41.3 7.2 132 65-201 835-979 (980)
6 1x3l_A Hypothetical protein PH 67.9 4.9 0.00017 38.0 4.5 74 158-231 135-211 (440)
7 2b8n_A Glycerate kinase, putat 66.8 7.1 0.00024 36.8 5.3 76 157-232 138-217 (429)
8 4hat_C Exportin-1; heat repeat 65.9 75 0.0026 32.8 13.3 38 161-198 967-1005(1023)
9 2lr2_A Immunoglobulin G-bindin 62.2 0.98 3.3E-05 33.0 -1.1 53 160-212 30-82 (88)
10 3gjx_A Exportin-1; transport, 51.5 42 0.0014 35.0 8.5 38 160-197 986-1024(1073)
11 1z00_B DNA repair endonuclease 50.5 11 0.00037 27.4 2.8 29 151-179 12-40 (84)
12 2a1j_A DNA repair endonuclease 36.4 15 0.00053 24.8 1.7 25 155-179 2-26 (63)
13 1w9c_A CRM1 protein, exportin 35.9 2E+02 0.0068 25.8 9.4 39 160-198 278-317 (321)
14 4htp_A DNA ligase 4; helical d 34.4 59 0.002 27.7 5.4 61 136-206 124-187 (240)
15 3lys_A Prophage PI2 protein 01 31.3 1.3E+02 0.0046 21.0 7.2 40 161-200 47-89 (112)
16 2q0z_X Protein Pro2281; SEC63, 27.6 1E+02 0.0036 27.2 6.1 58 114-175 122-179 (339)
17 1irz_A ARR10-B; helix-turn-hel 26.2 1.6E+02 0.0055 20.2 6.6 38 135-172 12-51 (64)
18 2abk_A Endonuclease III; DNA-r 23.6 2.4E+02 0.0082 23.0 7.2 62 114-177 68-129 (211)
19 3im1_A Protein SNU246, PRE-mRN 22.4 1.3E+02 0.0046 26.2 5.8 57 114-175 119-175 (328)
20 2rcc_A Ribonucleoside-diphosph 22.2 1.7E+02 0.0057 26.1 6.4 72 105-179 218-290 (346)
21 2jtt_C Calcyclin-binding prote 20.6 94 0.0032 19.0 3.0 28 169-196 7-34 (35)
22 3ee4_A Probable ribonucleoside 20.2 1.9E+02 0.0065 25.6 6.3 70 105-179 209-280 (323)
No 1
>3a6p_A Exportin-5; exportin-5, RANGTP, nuclearexport, importin-BE family, nucleus, phosphoprotein, protein transport; HET: GTP; 2.92A {Homo sapiens}
Probab=100.00 E-value=1e-33 Score=296.06 Aligned_cols=204 Identities=21% Similarity=0.278 Sum_probs=123.6
Q ss_pred ChhhHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCccchhhhh-hcchhhhhhhhHHHHHhcCcccHHHHHHHHhhhh
Q 025836 1 MEEKLLRDLTREICSLLSTMASSGLNNGIPPIEQSGHFNRVDVLF-LKDLDAFASKSMVGFLLKHKDLALPALQISLEAF 79 (247)
Q Consensus 1 leE~lLRqLTr~vv~ll~~~~~p~~~~~~~s~~~~~~~~~~~~st-~~~~~~~~~~~L~~~iL~~~~i~~plL~~~~~~l 79 (247)
|||+|||||||++|+++..++.++.+..+.+..+.+.+++.++++ ..+......++||+|+|+|+++++|+|.+|+|+|
T Consensus 957 ~~e~llr~lTr~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~l~~~~~~l 1036 (1204)
T 3a6p_A 957 LEEQLVRMLTREVMDLITVCCVSKKGADHSSAPPADGDDEEMMATEVTPSAMAELTDLGKCLMKHEDVCTALLITAFNSL 1036 (1204)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHBC------------------------------CBCHHHHHHHSSHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccccccccccccccccccchhhcchHHHHHhcCHHHHHHHHHHHHHHh
Confidence 589999999999999999988877433333322222233233333 2333344558999999999999999999999999
Q ss_pred ccccCc-chhhhhhhhhHHHHHHhcCCchhHHHHHHHHHHHHHHHHhc-ccchHhhHHHHHHHHHHHHHHhcCCCccHHH
Q 025836 80 TWTDGE-AVTKVSSFCSAVVLLAIQSNNIELQQFVSKDLFSAIIRGLA-LESNAVISADLVGLCREIFIYMCDRDPAPRQ 157 (247)
Q Consensus 80 ~wkDt~-~~~~~~sf~~~lv~~~i~~~~~~l~efi~~ev~~a~L~~L~-~~~f~d~q~eL~~L~~~Iy~~l~p~~~~pr~ 157 (247)
+|+||+ ||.+++.||..++ +.+.. +..+.++ +.++|+++|+||. ...+.++|+|+++|++.||+.|+|++++||+
T Consensus 1037 ~~~D~~~~~~~~~~~~~~~v-~~~~~-~~~~~~~-~~~l~~~vl~~l~~~~~~~~~~~~l~~l~~~i~~~~~~~~~~~~~ 1113 (1204)
T 3a6p_A 1037 AWKDTLSCQRTTSQLCWPLL-KQVLS-GTLLADA-VTWLFTSVLKGLQMHGQHDGCMASLVHLAFQIYEALRPRYLEIRA 1113 (1204)
T ss_dssp TSSCHHHHHHHHHHTHHHHH-TTSCS-SCCCHHH-HHHHHHHHHHHHHHSCSCHHHHHHHHHHHHHHHHHSTTTCSTHHH
T ss_pred cccCcHHHHHHHHHHHHHHH-HHHhc-ccCchHH-HHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHhCCCCccHHH
Confidence 999999 7788888887774 44332 2222333 5555555555554 3333449999999999999999999999999
Q ss_pred HHHhCCCCCHHhHHHHHHHHhcCCC----hHHHHHHHHHHHhccCCCchHHHhh
Q 025836 158 VLLSLPCITPQDLLAFEDALTKTAS----PREQKQHMRSLLVSGTGNNLKALAA 207 (247)
Q Consensus 158 VL~sLP~I~~~~l~~f~~~L~~~~s----~K~QR~l~~~LL~~~~g~~l~a~~~ 207 (247)
||++||||+++++++|+++|.++.+ +|+||++|||||.+++|+++..+..
T Consensus 1114 vl~~lP~i~~~~~~~f~~~l~~~~~~~~~~k~qr~~~~~ll~~~~g~~~~~~~~ 1167 (1204)
T 3a6p_A 1114 VMEQIPEIQKDSLDQFDCKLLNPSLQKVADKRRKDQFKRLIAGCIGKPLGEQFR 1167 (1204)
T ss_dssp HHTTSSSCCHHHHHHHHHHSSCC-------------------------------
T ss_pred HHHhCCCCCHHHHHHHHHHHhcccccccchHHHHHHHHHHHHHhcCCcHHHhhc
Confidence 9999999999999999999987654 9999999999999999999777643
No 2
>3m1i_C Exportin-1; heat repeat, GTP-binding, nucleotide-binding, NUCL protein transport, transport, cytoplasm, GTPase activation; HET: GTP; 2.00A {Saccharomyces cerevisiae} PDB: 2l1l_B
Probab=95.72 E-value=0.17 Score=51.69 Aligned_cols=136 Identities=15% Similarity=0.024 Sum_probs=85.2
Q ss_pred cccHHHHHHHHhhhhccccCcchhhhhhhhhHHHHHHhcCCc-hhHHHHH---HHHHHHHHHHHhcccchHhhHHHHHHH
Q 025836 65 KDLALPALQISLEAFTWTDGEAVTKVSSFCSAVVLLAIQSNN-IELQQFV---SKDLFSAIIRGLALESNAVISADLVGL 140 (247)
Q Consensus 65 ~~i~~plL~~~~~~l~wkDt~~~~~~~sf~~~lv~~~i~~~~-~~l~efi---~~ev~~a~L~~L~~~~f~d~q~eL~~L 140 (247)
+.....++..+..++.-+|...+..++.|..-++...-...+ .....|+ ...+++.++.+|.+..+.........+
T Consensus 844 ~~~~~~v~~~~~~al~~~~~~~~~~~l~~l~~l~~~~~~~~~~~~~~~f~~~~~~~l~~~~~~~l~~~~h~s~~~~~~~~ 923 (1049)
T 3m1i_C 844 PAAFKLFVDAICWAFKHNNRDVEVNGLQIALDLVKNIERMGNVPFANEFHKNYFFIFVSETFFVLTDSDHKSGFSKQALL 923 (1049)
T ss_dssp HHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHHHHHHHHSCSCHHHHHHHHHHHHHHHHHHHHHHHSTTCGGGHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHhcchHhhhHHHHHHH
Confidence 333455666677777767766666666777666654432112 2233333 245556666666666655555555566
Q ss_pred HHHHHHHh------cCCCc------------cHHH----HH-HhCCCCCHHhHHHHHHHHhcCCChHHH-HHHHHHHHhc
Q 025836 141 CREIFIYM------CDRDP------------APRQ----VL-LSLPCITPQDLLAFEDALTKTASPREQ-KQHMRSLLVS 196 (247)
Q Consensus 141 ~~~Iy~~l------~p~~~------------~pr~----VL-~sLP~I~~~~l~~f~~~L~~~~s~K~Q-R~l~~~LL~~ 196 (247)
++.++... .|.|+ ..++ +| .+.|++++++++.|-+.|.+...++.. |+++++|+..
T Consensus 924 l~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~f~~~l~~~~~~~~~f~~~~rdf~~~ 1003 (1049)
T 3m1i_C 924 LMKLISLVYDNKISVPLYQEAEVPQGTSNQVYLSQYLANMLSNAFPHLTSEQIASFLSALTKQYKDLVVFKGTLRDFLVQ 1003 (1049)
T ss_dssp HHHHHHHHHTTCCCSCSSCGGGSSTTCCHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCcccccccCccccCCCCCcHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHccCCHHHHHHHHHHHhHh
Confidence 66655322 23321 1223 33 557999999999999999888777876 9999999999
Q ss_pred cCCC
Q 025836 197 GTGN 200 (247)
Q Consensus 197 ~~g~ 200 (247)
+++-
T Consensus 1004 ~~~~ 1007 (1049)
T 3m1i_C 1004 IKEV 1007 (1049)
T ss_dssp HTSS
T ss_pred hhhh
Confidence 9654
No 3
>2x1g_F Cadmus; transport protein, developmental protein, mRNA processing, nuclear transport, mRNA splicing, mRNA transport; 3.35A {Drosophila melanogaster}
Probab=95.02 E-value=0.12 Score=52.00 Aligned_cols=131 Identities=11% Similarity=0.125 Sum_probs=82.6
Q ss_pred HHHHHHHHhhhhccccCcchhhhhhhhhHHHHHHhcCCchhHHHHHH---HHHHHHHHHHhcccchHhhHHHHHHHHHHH
Q 025836 68 ALPALQISLEAFTWTDGEAVTKVSSFCSAVVLLAIQSNNIELQQFVS---KDLFSAIIRGLALESNAVISADLVGLCREI 144 (247)
Q Consensus 68 ~~plL~~~~~~l~wkDt~~~~~~~sf~~~lv~~~i~~~~~~l~efi~---~ev~~a~L~~L~~~~f~d~q~eL~~L~~~I 144 (247)
+.+++.+...++.-+|...+.-++.|.+.++.... ..+.+++|+. ..+...++.++....-.....+++.++..+
T Consensus 827 l~~i~~~~~~~l~~~~~~~~~s~~~fl~~~i~~~~--~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~s~~~~~a~~l~~l 904 (971)
T 2x1g_F 827 YDRLVFYAQRGMTLPESGAIRNSIQFLTHFVMQSR--NHAHVTEVVLATGEQTLYTAMMCVGYLTPRSQVDKFADILLAM 904 (971)
T ss_dssp HHHHHHHHHHHHTSSCSSHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHHHHHHHTTSCGGGGGGGHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHhcCC--chHHHHHHHHHhHHHHHHHHHHHhcccCChhHHHHHHHHHHHH
Confidence 57788888888887777666666678777655421 2344555443 455555655553332233444555555555
Q ss_pred HHHhcCCC-ccHHHHHH--hCC--CCCHHhHHHHHHHHhcCC-ChHHHHHHHHHHHhccCCC
Q 025836 145 FIYMCDRD-PAPRQVLL--SLP--CITPQDLLAFEDALTKTA-SPREQKQHMRSLLVSGTGN 200 (247)
Q Consensus 145 y~~l~p~~-~~pr~VL~--sLP--~I~~~~l~~f~~~L~~~~-s~K~QR~l~~~LL~~~~g~ 200 (247)
+..+...+ +...++|. .+| ++++++.++|-++|.+.+ +.|.=|.++++|...++|-
T Consensus 905 ~~~~~~~~~~~l~~~l~~~~~p~~~~~~~~~~~f~~~l~~~~~~~r~~~~~~~~f~~~~r~~ 966 (971)
T 2x1g_F 905 NRKYAAEMAVWMKSLMSTPNFPTQLITDADKTRYTALIIKEKVNKRLLQQHLSEMAMKTRGL 966 (971)
T ss_dssp HHHHHHHHHHHHHHHHTSSSCSCSSSCHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHC-
T ss_pred HHHCcHHHHHHHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHhChHhHHHHHHHHHHHHcCc
Confidence 54432111 12334443 577 489999999999996664 7888899999999998764
No 4
>2x19_B Importin-13; nuclear transport, protein transport; HET: GTP; 2.80A {Homo sapiens} PDB: 2xwu_B
Probab=94.59 E-value=0.075 Score=53.17 Aligned_cols=131 Identities=10% Similarity=0.151 Sum_probs=83.7
Q ss_pred HHHHHHHHhhhhccccCcchhhhhhhhhHHHHHHhcCCchhHHHH---HHHHHHHHHHHHhcccchHhhHHHHHHHHHHH
Q 025836 68 ALPALQISLEAFTWTDGEAVTKVSSFCSAVVLLAIQSNNIELQQF---VSKDLFSAIIRGLALESNAVISADLVGLCREI 144 (247)
Q Consensus 68 ~~plL~~~~~~l~wkDt~~~~~~~sf~~~lv~~~i~~~~~~l~ef---i~~ev~~a~L~~L~~~~f~d~q~eL~~L~~~I 144 (247)
+.+++..+..++.-.|...+..++.|..-++.... ....+.+| .+..++..++.++.+........++..++..+
T Consensus 815 ~~~i~~~~~~~l~~~~~~~~~~~l~~l~~l~~~~~--~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~il~~l 892 (963)
T 2x19_B 815 VKAVFQCAVLALKFPEAPTVKASCGFFTELLPRCG--EVESVGKVVQEDGRMLLIAVLEAIGGQASRSLMDCFADILFAL 892 (963)
T ss_dssp HHHHHHHHHHHTTCSCHHHHHHHHHHHHHHGGGTT--SSCHHHHHTTTSHHHHHHHHHHHHTTTSCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHhcCC--ChHHHHHHHHHHHHHHHHHHHHHhcccCChhHHHHHHHHHHHH
Confidence 77788888888886776666666676666543211 12233333 25677777777776543333445556555666
Q ss_pred HHHhcCCCc-cHHHHHH--hCC--CCCHHhHHHHHHHHhcCC-ChHHHHHHHHHHHhccCCC
Q 025836 145 FIYMCDRDP-APRQVLL--SLP--CITPQDLLAFEDALTKTA-SPREQKQHMRSLLVSGTGN 200 (247)
Q Consensus 145 y~~l~p~~~-~pr~VL~--sLP--~I~~~~l~~f~~~L~~~~-s~K~QR~l~~~LL~~~~g~ 200 (247)
+..+...+. ...++|. .+| +++++..++|-++|.+.+ ..|.=|..+++|+..++|-
T Consensus 893 ~~~~~~~~~~~l~~~l~~~~~p~~~~~~~~~~~f~~~l~~~~~~~~~f~~~l~~F~~~~r~~ 954 (963)
T 2x19_B 893 NKHCFSLLSMWIKEALQPPGFPSARLSPEQKDTFSQQILRERVNKRRVKEMVKEFTLLCRGL 954 (963)
T ss_dssp HHHSHHHHHHHHHHHTCSTTSSCTTCCHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHHHC-
T ss_pred HHHChHHHHHHHHHHhcccCCCCCcCCHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHcCc
Confidence 554221111 1333442 588 899999999999997665 7888899999999998763
No 5
>3ibv_A Exportin-T; karyopherin, heat repeat, cytoplasm, nucleus, RNA- binding, transport, tRNA processing, tRNA-binding, RNA binding protein; 3.10A {Schizosaccharomyces pombe} PDB: 3icq_T*
Probab=76.50 E-value=4.8 Score=41.34 Aligned_cols=132 Identities=15% Similarity=0.110 Sum_probs=71.1
Q ss_pred cccHHHHHHHHhhh-hccccCcchhhhhhhhhHHHHHHhcCC-chhHHHHHHHHHHHHHHHHhcccch--Hh-----hHH
Q 025836 65 KDLALPALQISLEA-FTWTDGEAVTKVSSFCSAVVLLAIQSN-NIELQQFVSKDLFSAIIRGLALESN--AV-----ISA 135 (247)
Q Consensus 65 ~~i~~plL~~~~~~-l~wkDt~~~~~~~sf~~~lv~~~i~~~-~~~l~efi~~ev~~a~L~~L~~~~f--~d-----~q~ 135 (247)
....+.++..+.|. ....|+-+...++.|.+-++..-..++ -+-+.+|+-. +.+.|......|.| .| .-.
T Consensus 835 ~~~l~~~l~~l~~~a~~~~d~~~~K~a~~~l~~~v~~~~~~~~~~gf~~f~~~-~~~~~f~~p~~~~f~~~Daq~~~~~~ 913 (980)
T 3ibv_A 835 QVYFDPLINSILHFANLVGEPATQKSSIALVSKMVSLWGGKDGIAGFENFTLS-LTPLCFEMPVNPNFNTRDGQSLVVLG 913 (980)
T ss_dssp HTTHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHC-------CCHHHHHHH-HHHHHHHGGGC----------CHHHH
T ss_pred hHHHHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHCCCCcchHHHHHHHH-HHHHHHHhhcCCCCChhhHHHHHHHH
Confidence 34556666666643 346888866666677666655432111 2349999999 99999999877776 35 446
Q ss_pred HHHHHHHHHHHHhcCCCccHHHHHHh--CC--CCCHHhHHHHHHHHhcCCChHHHHHHHHHHHhccCCCc
Q 025836 136 DLVGLCREIFIYMCDRDPAPRQVLLS--LP--CITPQDLLAFEDALTKTASPREQKQHMRSLLVSGTGNN 201 (247)
Q Consensus 136 eL~~L~~~Iy~~l~p~~~~pr~VL~s--LP--~I~~~~l~~f~~~L~~~~s~K~QR~l~~~LL~~~~g~~ 201 (247)
|++.+...||...++ .--+.|.+ +| |+.++-.+.|-++|.+. ..|.=|.-|+.|+...+|.+
T Consensus 914 e~~~~~k~~~~~~g~---~~~~~l~~~~lp~~~~~~~~~~~~~~~l~~~-~~k~f~~~~~~~~~~~~~~~ 979 (980)
T 3ibv_A 914 ELAGLQKIILEKLGD---IYKSYLVTVYFPTVNFPDVMASEYLQALSNL-DSRSFKQFFQKFIQALKSGN 979 (980)
T ss_dssp HHHHHHHHHHHHHHH---HHHHHHHHTTTTC----CCHHHHHHHC-----------------CHHHHC--
T ss_pred HHHHHHHHHHHhcCH---HHHHHHHHhcCCcCCCCHHHHHHHHHHHhcc-chhhHHHHHHHHHHHhhcCC
Confidence 999999999999874 45667754 67 67778889999999533 35666677777777776654
No 6
>1x3l_A Hypothetical protein PH0495; structural genomics, riken structural genomics/proteomics in RSGI, NPPSFA; 2.10A {Pyrococcus horikoshii}
Probab=67.89 E-value=4.9 Score=38.02 Aligned_cols=74 Identities=19% Similarity=0.292 Sum_probs=58.1
Q ss_pred HHHhCC--CCCHHhHHHHHHHHhcCCChHHHHHHHHHHHhccCCCchHHHhhhcccc-ccccccccccccccccccc
Q 025836 158 VLLSLP--CITPQDLLAFEDALTKTASPREQKQHMRSLLVSGTGNNLKALAAQKSVN-VITNVSSHAAQIMPQKIEL 231 (247)
Q Consensus 158 VL~sLP--~I~~~~l~~f~~~L~~~~s~K~QR~l~~~LL~~~~g~~l~a~~~~k~~~-~i~~v~~~~~~~~~~~~~~ 231 (247)
=|+.+| ||+-+|.++..+.|.+++..-++=+.++|-|..+||-.|-+.+..+-.+ +|.||---+...-..|++.
T Consensus 135 ALl~~P~~gitL~dk~~~~~~LL~sGA~I~EiN~VRKhLS~iKGGrLA~~apA~vvtLiiSDV~GDdl~~IASGPTv 211 (440)
T 1x3l_A 135 ALFELPEEGISLEDLKLTTDLLLKSGAKIHEINTVRKHISKVKGGKLAKMIKGTGIVLIISDVVGDNLEAIASGPTV 211 (440)
T ss_dssp HHSCCBCTTCCHHHHHHHHHHHHHTCCCHHHHHHHHHTTBSSTTTHHHHTCSSEEEEEEECCSTTCCTTTGGGCTTS
T ss_pred HhhhcCCCCCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhccchHHHHhCCCcEEEEEEecCCCCChhheecCCcC
Confidence 456666 8999999999999999999999999999999999999987765333233 7888887776643334443
No 7
>2b8n_A Glycerate kinase, putative; TM1585, glycerate kinase (EC 2.7.1.31), structural genomics, center for structural genomics, JCSG; 2.53A {Thermotoga maritima} SCOP: c.118.1.1
Probab=66.83 E-value=7.1 Score=36.84 Aligned_cols=76 Identities=18% Similarity=0.283 Sum_probs=59.5
Q ss_pred HHHHhCC--CCCHHhHHHHHHHHhcCCChHHHHHHHHHHHhccCCCchHHHhh-hcccc-cccccccccccccccccccc
Q 025836 157 QVLLSLP--CITPQDLLAFEDALTKTASPREQKQHMRSLLVSGTGNNLKALAA-QKSVN-VITNVSSHAAQIMPQKIELK 232 (247)
Q Consensus 157 ~VL~sLP--~I~~~~l~~f~~~L~~~~s~K~QR~l~~~LL~~~~g~~l~a~~~-~k~~~-~i~~v~~~~~~~~~~~~~~~ 232 (247)
.=|+.+| ||+-+|.++..+.|.+++.+-++=+.++|-|..+||-.|-+.+. .+-.+ +|.||---+...-..|++.-
T Consensus 138 SALl~~P~~gitL~dk~~i~~~LL~sGA~I~EiN~VRKhLS~iKGGrLA~~a~pA~vvtLiiSDV~GDdl~~IASGPTvp 217 (429)
T 2b8n_A 138 SSLFELPLEGVSLEEIQKLTSALLKSGASIEEINTVRKHLSQVKGGRFAERVFPAKVVALVLSDVLGDRLDVIASGPAWP 217 (429)
T ss_dssp HHHSCCBCTTCCHHHHHHHHHHHHHTTCCHHHHHHHHHTTBSSTTTHHHHHHTTSEEEEEEECCSTTCCTTTGGGCTTSC
T ss_pred HHHhhcCCCCCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhcccHHHHHhcCCCeEEEEEEecCCCCChhheecCCcCC
Confidence 3566777 89999999999999999999999999999999999999877652 33333 88888877766433344443
No 8
>4hat_C Exportin-1; heat repeat, nuclear export, RAN-ranbp1, LMB, leptomycin B, protein transport-antibiotic complex; HET: GNP LMB; 1.78A {Saccharomyces cerevisiae} PDB: 4hau_C* 4hav_C* 4hb2_C* 4hax_C* 4haw_C* 4hay_C* 4hb3_C* 4haz_C* 4hb4_C* 3m1i_C* 4hb0_C* 4gmx_C* 4gpt_C* 3vyc_A 2l1l_B
Probab=65.90 E-value=75 Score=32.75 Aligned_cols=38 Identities=29% Similarity=0.384 Sum_probs=33.4
Q ss_pred hCCCCCHHhHHHHHHHHhcC-CChHHHHHHHHHHHhccC
Q 025836 161 SLPCITPQDLLAFEDALTKT-ASPREQKQHMRSLLVSGT 198 (247)
Q Consensus 161 sLP~I~~~~l~~f~~~L~~~-~s~K~QR~l~~~LL~~~~ 198 (247)
+.|+++++.+..|-..|-+. ...+.=|.+++|||...+
T Consensus 967 ~fp~~~~~qi~~fv~~l~~~~~~~~~f~~~lrdfli~~k 1005 (1023)
T 4hat_C 967 AFPHLTSEQIASFLSALTKQCKDLVVFKGTLRDFLVQIK 1005 (1023)
T ss_dssp HCTTSCHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHTT
T ss_pred hCCCCCHHHHHHHHHHHHHccCCHHHHHHHHHHHhHHhH
Confidence 67999999999999999775 567888999999998874
No 9
>2lr2_A Immunoglobulin G-binding protein A; Z domain, lanthanide binding TAG, de novo protein; NMR {Artificial gene}
Probab=62.20 E-value=0.98 Score=33.01 Aligned_cols=53 Identities=19% Similarity=0.156 Sum_probs=41.7
Q ss_pred HhCCCCCHHhHHHHHHHHhcCCChHHHHHHHHHHHhccCCCchHHHhhhcccc
Q 025836 160 LSLPCITPQDLLAFEDALTKTASPREQKQHMRSLLVSGTGNNLKALAAQKSVN 212 (247)
Q Consensus 160 ~sLP~I~~~~l~~f~~~L~~~~s~K~QR~l~~~LL~~~~g~~l~a~~~~k~~~ 212 (247)
+-|||++++.-..|...|....+..+||+=|..=++.-..++-.-|+++|..|
T Consensus 30 l~lPNLneeQrnafiqSLkDDp~veeq~ngfiqslkddpSqSanlLaEAKKLN 82 (88)
T 2lr2_A 30 LHLPNLNEEQRNAFIQSLKDDSYIDTNNDGAYEGDELSGSQSANLLAEAKKLN 82 (88)
T ss_dssp HTCSSCCHHHHHHHHHHHHHTSCCCTTCSSSCCGGGSCCSCHHHHHHHHHHHH
T ss_pred HhCCCCCHHHHHHHHHHhccCcchhhhcccchhccccccchhHHHHHHHHHcc
Confidence 46999999999999999988877778887776666666666766677777655
No 10
>3gjx_A Exportin-1; transport, cytoplasm, nucleus, RNA-binding, acetylation, GTP-binding, HOST-virus interaction, nucleotide-binding, phosphoprotein; HET: GTP; 2.50A {Mus musculus} PDB: 3nby_A* 3nbz_A* 3nc0_A* 3nc1_A* 3gb8_A
Probab=51.52 E-value=42 Score=34.96 Aligned_cols=38 Identities=21% Similarity=0.291 Sum_probs=33.2
Q ss_pred HhCCCCCHHhHHHHHHHHhcC-CChHHHHHHHHHHHhcc
Q 025836 160 LSLPCITPQDLLAFEDALTKT-ASPREQKQHMRSLLVSG 197 (247)
Q Consensus 160 ~sLP~I~~~~l~~f~~~L~~~-~s~K~QR~l~~~LL~~~ 197 (247)
.+.|+++++.+..|-..|-+. .....=|.+++|||..+
T Consensus 986 ~~fp~~~~~qi~~fv~~l~~~~~d~~~f~~~lrDFli~~ 1024 (1073)
T 3gjx_A 986 SAFPHLQDAQVKLFVTGLFSLNQDIPAFKEHLRDFLVQI 1024 (1073)
T ss_dssp HHCTTSCHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHH
T ss_pred HhCCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Confidence 567999999999999999775 56788899999999887
No 11
>1z00_B DNA repair endonuclease XPF; helix-hairpin-helix, hydrolase; HET: DNA; NMR {Homo sapiens} SCOP: a.60.2.5 PDB: 2aq0_A*
Probab=50.50 E-value=11 Score=27.43 Aligned_cols=29 Identities=17% Similarity=0.488 Sum_probs=23.7
Q ss_pred CCccHHHHHHhCCCCCHHhHHHHHHHHhc
Q 025836 151 RDPAPRQVLLSLPCITPQDLLAFEDALTK 179 (247)
Q Consensus 151 ~~~~pr~VL~sLP~I~~~~l~~f~~~L~~ 179 (247)
-++.|..+|.+||||.+....++-..+.+
T Consensus 12 ~N~~~~s~L~~IpGIG~kr~~~LL~~FgS 40 (84)
T 1z00_B 12 YNPGPQDFLLKMPGVNAKNCRSLMHHVKN 40 (84)
T ss_dssp SCHHHHHHHHTCSSCCHHHHHHHHHHSSC
T ss_pred ccccHHHHHHhCCCCCHHHHHHHHHHcCC
Confidence 46789999999999999988777666544
No 12
>2a1j_A DNA repair endonuclease XPF; XPF, xeroderma pigmentosum, DNA repair, endonuclease, helix-hairpin-helix, DNA binding protein; HET: DNA; 2.70A {Homo sapiens} SCOP: a.60.2.5 PDB: 2kn7_A*
Probab=36.41 E-value=15 Score=24.85 Aligned_cols=25 Identities=16% Similarity=0.453 Sum_probs=19.5
Q ss_pred HHHHHHhCCCCCHHhHHHHHHHHhc
Q 025836 155 PRQVLLSLPCITPQDLLAFEDALTK 179 (247)
Q Consensus 155 pr~VL~sLP~I~~~~l~~f~~~L~~ 179 (247)
|..+|.++|||.+....++-....+
T Consensus 2 ~~s~L~~IpGIG~kr~~~LL~~Fgs 26 (63)
T 2a1j_A 2 PQDFLLKMPGVNAKNCRSLMHHVKN 26 (63)
T ss_dssp CCHHHHTSTTCCHHHHHHHHHHCSS
T ss_pred HHhHHHcCCCCCHHHHHHHHHHcCC
Confidence 5578999999999887777665544
No 13
>1w9c_A CRM1 protein, exportin 1; nuclear protein, nuclear export complex; 2.3A {Homo sapiens} SCOP: a.118.1.19
Probab=35.89 E-value=2e+02 Score=25.79 Aligned_cols=39 Identities=21% Similarity=0.284 Sum_probs=31.9
Q ss_pred HhCCCCCHHhHHHHHHHHhcCC-ChHHHHHHHHHHHhccC
Q 025836 160 LSLPCITPQDLLAFEDALTKTA-SPREQKQHMRSLLVSGT 198 (247)
Q Consensus 160 ~sLP~I~~~~l~~f~~~L~~~~-s~K~QR~l~~~LL~~~~ 198 (247)
.+-|+++++.+..|-.-|-+.. ....=|.+++|||-.++
T Consensus 278 ~~Fp~l~~~qi~~fv~glf~~~~d~~~Fk~~lrDFLIqiK 317 (321)
T 1w9c_A 278 SAFPHLQDAQVKLFVTGLFSLNQDIPAFKEHLRDFLVQIK 317 (321)
T ss_dssp HHCTTSCHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHH
T ss_pred HhCCCCCHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHH
Confidence 3469999999999999997754 56677899999997654
No 14
>4htp_A DNA ligase 4; helical domain, DNA binding domain, DNA, ligase-HYD complex; HET: DNA; 2.25A {Homo sapiens} PDB: 4hto_A*
Probab=34.38 E-value=59 Score=27.68 Aligned_cols=61 Identities=15% Similarity=0.121 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHHhcCCCccHHHHHHhCCCCCHHhHHHHHHHHhcCC---ChHHHHHHHHHHHhccCCCchHHHh
Q 025836 136 DLVGLCREIFIYMCDRDPAPRQVLLSLPCITPQDLLAFEDALTKTA---SPREQKQHMRSLLVSGTGNNLKALA 206 (247)
Q Consensus 136 eL~~L~~~Iy~~l~p~~~~pr~VL~sLP~I~~~~l~~f~~~L~~~~---s~K~QR~l~~~LL~~~~g~~l~a~~ 206 (247)
|+...+..+ +..+.+.+ +.+|-++|+.+-.+|++.. +...++.++++|+..+.+.+.|=|.
T Consensus 124 Dlg~va~~~---~~~r~~~~-------~~LTv~~V~~~L~~IA~~~g~~s~~~k~~~l~~Ll~~~t~~E~k~li 187 (240)
T 4htp_A 124 DFAMIAYFV---LKPRCLQK-------GSLTIQQVNDLLDSIASNNSAKRKDLIKKSLLQLITQSSALEQKWLI 187 (240)
T ss_dssp CHHHHHHHH---HTTSSCCS-------CCCBHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCHHHHHHHH
T ss_pred CHHHHHHHH---HHccCCCC-------CCcCHHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHHCCHHHHHHHH
Confidence 555555554 44444432 6799999999999997643 3334458999999999998888764
No 15
>3lys_A Prophage PI2 protein 01, integrase; helical N-terminal domain, structural genomics, PSI-2, protein structure initiative; 2.80A {Lactococcus lactis}
Probab=31.30 E-value=1.3e+02 Score=20.96 Aligned_cols=40 Identities=10% Similarity=0.078 Sum_probs=29.4
Q ss_pred hCCCCCHHhHHHHHHHHhcCCC---hHHHHHHHHHHHhccCCC
Q 025836 161 SLPCITPQDLLAFEDALTKTAS---PREQKQHMRSLLVSGTGN 200 (247)
Q Consensus 161 sLP~I~~~~l~~f~~~L~~~~s---~K~QR~l~~~LL~~~~g~ 200 (247)
.+-.|++.++++|...+.+..+ -+.-+..++.++..+...
T Consensus 47 ~l~~It~~~i~~~~~~l~~~~s~~t~~~~~~~l~~i~~~Av~~ 89 (112)
T 3lys_A 47 LISEITASSYQRALNKFAETHAKASTKGFHTRVRASIQCLIEE 89 (112)
T ss_dssp BTTTCCHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CHHhCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHC
Confidence 5679999999999999976544 355566677777766433
No 16
>2q0z_X Protein Pro2281; SEC63, SEC, NESG, HR1979, structural genomics, translocase, northeast structural genomics consortium, PSI-2; 2.00A {Homo sapiens} SCOP: a.289.1.1 b.1.18.22
Probab=27.55 E-value=1e+02 Score=27.15 Aligned_cols=58 Identities=19% Similarity=0.186 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHhcccchHhhHHHHHHHHHHHHHHhcCCCccHHHHHHhCCCCCHHhHHHHHH
Q 025836 114 SKDLFSAIIRGLALESNAVISADLVGLCREIFIYMCDRDPAPRQVLLSLPCITPQDLLAFED 175 (247)
Q Consensus 114 ~~ev~~a~L~~L~~~~f~d~q~eL~~L~~~Iy~~l~p~~~~pr~VL~sLP~I~~~~l~~f~~ 175 (247)
+..++.|++...........-.-++.|+.-|--.+-+.. +| |.|||+|+++.+.++++
T Consensus 122 a~RLl~al~di~~~~g~~~~~~~~l~L~q~i~q~~w~~~-~p---L~Qlp~i~~~~~~~l~~ 179 (339)
T 2q0z_X 122 AIRLIQACVDVLSSNGWLSPALAAMELAQMVTQAMWSKD-SY---LKQLPHFTSEHIKRCTD 179 (339)
T ss_dssp HHHHHHHHHHHHHHTTBHHHHHHHHHHHHHHHHTCCTTS-CG---GGGSTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCCCC-Cc---eecCCCCCHHHHHHHHh
Confidence 445666666433322222223446667666666665543 33 78999999998888764
No 17
>1irz_A ARR10-B; helix-turn-helix, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: a.4.1.11
Probab=26.23 E-value=1.6e+02 Score=20.21 Aligned_cols=38 Identities=11% Similarity=0.193 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHHhcCCCccHHHHH--HhCCCCCHHhHHH
Q 025836 135 ADLVGLCREIFIYMCDRDPAPRQVL--LSLPCITPQDLLA 172 (247)
Q Consensus 135 ~eL~~L~~~Iy~~l~p~~~~pr~VL--~sLP~I~~~~l~~ 172 (247)
.||-.-+...+..|++.-.+|..|| +..||+|.+.+..
T Consensus 12 ~elH~~Fv~Av~~LG~~~AtPk~Il~~M~v~gLT~~~VkS 51 (64)
T 1irz_A 12 HELHNKFLAAVDHLGVERAVPKKILDLMNVDKLTRENVAS 51 (64)
T ss_dssp HHHHHHHHHHHHHHCTTTCCHHHHHHHHCCTTCCHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCCcHHHHHHcCCCCCCHHHHHH
Confidence 4666677788888898888999985 4588999986543
No 18
>2abk_A Endonuclease III; DNA-repair, DNA glycosylase; 1.85A {Escherichia coli} SCOP: a.96.1.1
Probab=23.56 E-value=2.4e+02 Score=23.03 Aligned_cols=62 Identities=13% Similarity=0.191 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHhcccchHhhHHHHHHHHHHHHHHhcCCCccHHHHHHhCCCCCHHhHHHHHHHH
Q 025836 114 SKDLFSAIIRGLALESNAVISADLVGLCREIFIYMCDRDPAPRQVLLSLPCITPQDLLAFEDAL 177 (247)
Q Consensus 114 ~~ev~~a~L~~L~~~~f~d~q~eL~~L~~~Iy~~l~p~~~~pr~VL~sLP~I~~~~l~~f~~~L 177 (247)
..+-+..+|+++. |+..--.-|..++..+...+....+..++-|++||||-+...+-+--.-
T Consensus 68 ~~~~l~~~i~~~G--~~~~KA~~l~~~a~~~~~~~~g~~~~~~~~L~~l~GIG~~tA~~il~~~ 129 (211)
T 2abk_A 68 GVEGVKTYIKTIG--LYNSKAENIIKTCRILLEQHNGEVPEDRAALEALPGVGRKTANVVLNTA 129 (211)
T ss_dssp HHHHHHHHHTTST--THHHHHHHHHHHHHHHHHHTTTSCCSCHHHHHHSTTCCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHcC--CChHHHHHHHHHHHHHHHHcCCCchHHHHHHHhCCCCChHHHHHHHHHH
Confidence 3344556666553 2211222344555555556666678889999999999999877776654
No 19
>3im1_A Protein SNU246, PRE-mRNA-splicing helicase BRR2; ATPase, RNA helicase, rnpase, RNA unwindase, molecular model mRNA splicing; 1.65A {Saccharomyces cerevisiae} PDB: 3im2_A* 3hib_A
Probab=22.40 E-value=1.3e+02 Score=26.23 Aligned_cols=57 Identities=16% Similarity=0.219 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHhcccchHhhHHHHHHHHHHHHHHhcCCCccHHHHHHhCCCCCHHhHHHHHH
Q 025836 114 SKDLFSAIIRGLALESNAVISADLVGLCREIFIYMCDRDPAPRQVLLSLPCITPQDLLAFED 175 (247)
Q Consensus 114 ~~ev~~a~L~~L~~~~f~d~q~eL~~L~~~Iy~~l~p~~~~pr~VL~sLP~I~~~~l~~f~~ 175 (247)
+..++.|++.......... -..++.|+.-|--..-+.. +| |.|||+|+++.+.++++
T Consensus 119 a~rLl~al~di~~~~g~~~-~~~~l~L~q~i~q~~w~~~-~p---L~Qlp~i~~~~~~~l~~ 175 (328)
T 3im1_A 119 VVPLINVVVDILSANGYLN-ATTAMDLAQMLIQGVWDVD-NP---LRQIPHFNNKILEKCKE 175 (328)
T ss_dssp HHHHHHHHHHHHHHTTBTT-HHHHHHHHHHHHHTSCTTS-CG---GGGSTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCcHH-HHHHHHHHHHHHhhcCCCC-Cc---eeCCCCCCHHHHHHHHh
Confidence 4556666664432222222 3356677777766666544 34 78999999998877764
No 20
>2rcc_A Ribonucleoside-diphosphate reductase subunit beta; NP_241368.1, putative class I ribonucleotide reductase, ribonucleotide reductase; HET: MSE PGE PG4; 1.90A {Bacillus halodurans c-125}
Probab=22.24 E-value=1.7e+02 Score=26.07 Aligned_cols=72 Identities=10% Similarity=0.164 Sum_probs=45.3
Q ss_pred CchhHHHHHHHHHHHHHHHHhcccchHhhHHHHHHHHHHHHHHhcCCCccHHHHH-HhCCCCCHHhHHHHHHHHhc
Q 025836 105 NNIELQQFVSKDLFSAIIRGLALESNAVISADLVGLCREIFIYMCDRDPAPRQVL-LSLPCITPQDLLAFEDALTK 179 (247)
Q Consensus 105 ~~~~l~efi~~ev~~a~L~~L~~~~f~d~q~eL~~L~~~Iy~~l~p~~~~pr~VL-~sLP~I~~~~l~~f~~~L~~ 179 (247)
.|..++-.++..+++..++-..+....+.+..+..++...+.. .......++ ..++|++.+++.+|-+..++
T Consensus 218 RDE~~H~~f~~~l~~~l~~e~~~~~~~e~~~~v~~l~~eav~~---E~~~~~~~~~~~~~Gl~~~~~~~yi~y~an 290 (346)
T 2rcc_A 218 RDEQLHVYLFTNIFKELLVEFPELNTEETKTFVKTTLMKAADL---EKDWFRYIIGDKIPGINPEDMETYISFIAN 290 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHH---HHHHHHHHTTTCSTTCCHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHhcCChhccHHHHHHHHHHHHHHHHH---HHHHHHHHccCCCCCCCHHHHHHHHHHHHH
Confidence 3555666677777777666444443444666667777766653 111122222 26889999999999988876
No 21
>2jtt_C Calcyclin-binding protein; S100A6, SIAH-1 interacting protein, ubiquitination, E3 ligase complex, beta-catenin, calcium, cell cycle, mitogen; NMR {Mus musculus}
Probab=20.57 E-value=94 Score=18.95 Aligned_cols=28 Identities=7% Similarity=0.111 Sum_probs=23.6
Q ss_pred hHHHHHHHHhcCCChHHHHHHHHHHHhc
Q 025836 169 DLLAFEDALTKTASPREQKQHMRSLLVS 196 (247)
Q Consensus 169 ~l~~f~~~L~~~~s~K~QR~l~~~LL~~ 196 (247)
.|.+|-.++-+.+.+..+|+++|.+.+.
T Consensus 7 ~l~~~fk~iY~~gddd~kram~KS~~eS 34 (35)
T 2jtt_C 7 GLMNVLKKIYEDGDDDMKRTINKAWVES 34 (35)
T ss_dssp SHHHHHHHHHTTCCSSHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHhhc
Confidence 5888889998888899999999987653
No 22
>3ee4_A Probable ribonucleoside-diphosphate reductase; manganese, iron, DIIRON, carboxylate, oxidase, ligand, C monooxygenase; HET: MYR; 1.90A {Mycobacterium tuberculosis} PDB: 4ac8_A*
Probab=20.17 E-value=1.9e+02 Score=25.61 Aligned_cols=70 Identities=7% Similarity=-0.054 Sum_probs=42.2
Q ss_pred CchhHHHHHHHHHHHHHHHHhcccchHhhHHHHHHHHHHHHHHhcCCCccHHHHH-HhCC-CCCHHhHHHHHHHHhc
Q 025836 105 NNIELQQFVSKDLFSAIIRGLALESNAVISADLVGLCREIFIYMCDRDPAPRQVL-LSLP-CITPQDLLAFEDALTK 179 (247)
Q Consensus 105 ~~~~l~efi~~ev~~a~L~~L~~~~f~d~q~eL~~L~~~Iy~~l~p~~~~pr~VL-~sLP-~I~~~~l~~f~~~L~~ 179 (247)
.|..++-.++..+++...+-. ...+.+.+.++..++...+.. ......++ ..+| |++.+++.+|-+..++
T Consensus 209 RDE~~H~~f~~~l~~~l~~e~-p~~~~~~~~~v~el~~eave~----~e~~~~~~~~~~~lGl~~~~~~~Yi~y~An 280 (323)
T 3ee4_A 209 DDERRHMAWGTFTCRRHVAAD-DANWTVFETRMNELIPLALRL----IEEGFALYGDQPPFDLSKDDFLQYSTDKGM 280 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC-THHHHHHHHHHHHHHHHHHHH----HHHHHHTTTTCCSTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhC-hHhhHHHHHHHHHHHHHHHHH----HHHHHHHcCCCccCCCCHHHHHHHHHHHHH
Confidence 455677777777777766543 222333555555555555544 01111222 3678 9999999999988876
Done!