Query 025836
Match_columns 247
No_of_seqs 116 out of 141
Neff 5.9
Searched_HMMs 13730
Date Mon Mar 25 18:40:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025836.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/025836hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1lvaa3 a.4.5.35 (A:511-574) C 64.6 10 0.00074 24.3 6.3 50 131-181 2-51 (64)
2 d2a1ja1 a.60.2.5 (A:837-898) D 55.5 2.4 0.00018 27.2 1.7 25 155-179 1-25 (62)
3 d2b8na1 c.118.1.1 (A:4-417) Pu 52.7 9.4 0.00068 33.6 5.7 76 158-233 124-203 (414)
4 d1q2la1 d.185.1.1 (A:504-732) 49.4 28 0.0021 25.8 7.6 52 146-197 160-221 (229)
5 d1xqra1 a.118.1.21 (A:87-350) 45.2 59 0.0043 24.7 9.5 82 110-197 180-262 (264)
6 d3bzka1 a.60.2.6 (A:474-563) T 43.7 15 0.0011 25.0 4.6 27 150-176 28-54 (90)
7 d1irza_ a.4.1.11 (A:) Arr10-B 24.6 81 0.0059 20.0 6.9 45 135-179 12-62 (64)
8 d1xm9a1 a.118.1.24 (A:244-700) 24.4 1.4E+02 0.01 22.6 11.6 80 105-189 360-440 (457)
9 d1syya_ a.25.1.2 (A:) Ribonucl 22.9 55 0.004 26.5 5.5 72 105-179 224-296 (317)
10 d1orna_ a.96.1.1 (A:) Endonucl 22.9 61 0.0044 24.9 5.5 45 135-179 88-132 (214)
11 d1keaa_ a.96.1.2 (A:) Thymine- 22.4 36 0.0027 26.4 4.0 62 116-179 74-135 (217)
12 d1mxra_ a.25.1.2 (A:) Ribonucl 22.2 60 0.0044 26.6 5.6 72 105-179 236-313 (339)
13 d2q0zx1 a.289.1.1 (X:33-208) P 21.8 89 0.0065 22.7 6.1 37 135-175 101-137 (176)
14 d2abka_ a.96.1.1 (A:) Endonucl 21.4 50 0.0036 25.5 4.6 63 114-179 68-131 (211)
15 d1fc2c_ a.8.1.1 (C:) Immunoglo 21.4 34 0.0025 20.4 2.6 21 160-180 13-33 (44)
16 d1w9ca_ a.118.1.19 (A:) Export 21.0 2E+02 0.015 23.3 11.9 39 161-199 279-318 (321)
No 1
>d1lvaa3 a.4.5.35 (A:511-574) C-terminal fragment of elongation factor SelB {Moorella thermoacetica [TaxId: 1525]}
Probab=64.61 E-value=10 Score=24.27 Aligned_cols=50 Identities=14% Similarity=0.143 Sum_probs=43.0
Q ss_pred HhhHHHHHHHHHHHHHHhcCCCccHHHHHHhCCCCCHHhHHHHHHHHhcCC
Q 025836 131 AVISADLVGLCREIFIYMCDRDPAPRQVLLSLPCITPQDLLAFEDALTKTA 181 (247)
Q Consensus 131 ~d~q~eL~~L~~~Iy~~l~p~~~~pr~VL~sLP~I~~~~l~~f~~~L~~~~ 181 (247)
.+.|..|..-|..+|..-+-..|..|++...+ |++...+..+-.+|.+.+
T Consensus 2 s~~q~~l~~~I~~~~~~~g~~PP~vrdl~~~l-~~~e~~~~~lL~~l~~~G 51 (64)
T d1lvaa3 2 SETQKKLLKDLEDKYRVSRWQPPSFKEVAGSF-NLDPSELEELLHYLVREG 51 (64)
T ss_dssp CHHHHHHHHHHHHHHHHHTTSCCBHHHHHHHT-TCCHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHHHcCCCCCcHHHHHHHh-CCCHHHHHHHHHHHHHCC
Confidence 35688899999999999888899999999999 799988888888886644
No 2
>d2a1ja1 a.60.2.5 (A:837-898) DNA repair endonuclease XPF {Human (Homo sapiens) [TaxId: 9606]}
Probab=55.48 E-value=2.4 Score=27.21 Aligned_cols=25 Identities=16% Similarity=0.453 Sum_probs=19.9
Q ss_pred HHHHHHhCCCCCHHhHHHHHHHHhc
Q 025836 155 PRQVLLSLPCITPQDLLAFEDALTK 179 (247)
Q Consensus 155 pr~VL~sLP~I~~~~l~~f~~~L~~ 179 (247)
|..+|.+||||++....++-....+
T Consensus 1 p~d~L~~iPGIg~~~~~~Ll~~f~S 25 (62)
T d2a1ja1 1 PQDFLLKMPGVNAKNCRSLMHHVKN 25 (62)
T ss_dssp CCHHHHTSTTCCHHHHHHHHHHCSS
T ss_pred CchHHhcCCCCCHHHHHHHHHHhcc
Confidence 4578999999999988887665544
No 3
>d2b8na1 c.118.1.1 (A:4-417) Putative glycerate kinase (hypothetical protein TM1585) {Thermotoga maritima [TaxId: 2336]}
Probab=52.71 E-value=9.4 Score=33.56 Aligned_cols=76 Identities=17% Similarity=0.257 Sum_probs=59.6
Q ss_pred HHHhC--CCCCHHhHHHHHHHHhcCCChHHHHHHHHHHHhccCCCchHHHh-hhcccc-ccccccccccccccccccccc
Q 025836 158 VLLSL--PCITPQDLLAFEDALTKTASPREQKQHMRSLLVSGTGNNLKALA-AQKSVN-VITNVSSHAAQIMPQKIELKR 233 (247)
Q Consensus 158 VL~sL--P~I~~~~l~~f~~~L~~~~s~K~QR~l~~~LL~~~~g~~l~a~~-~~k~~~-~i~~v~~~~~~~~~~~~~~~~ 233 (247)
=|+.. |||+-+|..++.+.|.+.+.+=++=+.+++-|..+||-.|-..+ ..+-.+ ++.||--.....-..|++..|
T Consensus 124 ALl~~P~~gitL~dk~~~~~~Ll~sGA~I~eiN~VRk~lS~iKGG~La~~a~pa~v~sLilSDV~GDdl~~IaSGPTvpd 203 (414)
T d2b8na1 124 SLFELPLEGVSLEEIQKLTSALLKSGASIEEINTVRKHLSQVKGGRFAERVFPAKVVALVLSDVLGDRLDVIASGPAWPD 203 (414)
T ss_dssp HHSCCBCTTCCHHHHHHHHHHHHHTTCCHHHHHHHHHTTBSSTTTHHHHHHTTSEEEEEEECCSTTCCTTTGGGCTTSCC
T ss_pred cchhcCCCCCCHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccccHHHHHhccCceEEEEEecCCCCCchheecCCcCCC
Confidence 45554 49999999999999999999999999999999999999988776 333333 788988877775444444443
No 4
>d1q2la1 d.185.1.1 (A:504-732) Protease III {Escherichia coli [TaxId: 562]}
Probab=49.44 E-value=28 Score=25.76 Aligned_cols=52 Identities=21% Similarity=0.176 Sum_probs=41.3
Q ss_pred HHhcCCCccHHHHHHhCCCCCHHhHHHHHHHHhcCC----------ChHHHHHHHHHHHhcc
Q 025836 146 IYMCDRDPAPRQVLLSLPCITPQDLLAFEDALTKTA----------SPREQKQHMRSLLVSG 197 (247)
Q Consensus 146 ~~l~p~~~~pr~VL~sLP~I~~~~l~~f~~~L~~~~----------s~K~QR~l~~~LL~~~ 197 (247)
..+.+..-.+...+.+|.+|+.+|+.+|.+++-++. +..+-++++.++...+
T Consensus 160 ~~~~~~~~~~~~~~~~l~~it~~dl~~f~~~~~~~~~~~~~i~Gn~~~~~a~~l~~~~~~~L 221 (229)
T d1q2la1 160 MLSQVPYFSRDERRKILPSITLKEVLAYRDALKSGARPEFMVIGNMTEAQATTLARDVQKQL 221 (229)
T ss_dssp HTTSSSCCCHHHHHHHGGGCCHHHHHHHHHHHHTTCEEEEEEEESCCHHHHHHHHHHHHHHH
T ss_pred HhcccCCCcchhhHHHHhhhhHHHHHHHHHHhcCccCEEEEEEcCCCHHHHHHHHHHHHhhc
Confidence 334455567888999999999999999999998775 3677777888877655
No 5
>d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=45.22 E-value=59 Score=24.69 Aligned_cols=82 Identities=12% Similarity=0.091 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHHHHHhcccchHhhHHHHHHHHHHHHHHhcCCCccHHHHHHhCCCC-CHHhHHHHHHHHhcCCChHHHHH
Q 025836 110 QQFVSKDLFSAIIRGLALESNAVISADLVGLCREIFIYMCDRDPAPRQVLLSLPCI-TPQDLLAFEDALTKTASPREQKQ 188 (247)
Q Consensus 110 ~efi~~ev~~a~L~~L~~~~f~d~q~eL~~L~~~Iy~~l~p~~~~pr~VL~sLP~I-~~~~l~~f~~~L~~~~s~K~QR~ 188 (247)
..++...+++.++.-|+.+. .+.+.-.+..+.. +...++..++-.. -+++ ..+.+..+...+......+...+
T Consensus 180 ~~~~~~~~v~~L~~lL~~~~-~~~~~~a~~aL~~----L~~~~~~~~~~~~-~~~l~~~~~L~~~~~~~~~~~~~~e~~~ 253 (264)
T d1xqra1 180 GTLCSMGMVQQLVALVRTEH-SPFHEHVLGALCS----LVTDFPQGVRECR-EPELGLEELLRHRCQLLQQHEEYQEELE 253 (264)
T ss_dssp HHHHHTTHHHHHHHHHTSCC-STHHHHHHHHHHH----HHTTCHHHHHHHH-CGGGCHHHHHHHHHHHHTTCGGGHHHHH
T ss_pred HHHHHhhhHHHHHHHHcCCC-HHHHHHHHHHHHH----HHhcCHHHHHHHH-HhhhhHHHHHHHHHHhccchHHHHHHHH
Confidence 33444456666666665442 3344433333322 3333444433322 2222 34456666666666666778788
Q ss_pred HHHHHHhcc
Q 025836 189 HMRSLLVSG 197 (247)
Q Consensus 189 l~~~LL~~~ 197 (247)
...+|+..+
T Consensus 254 ~~~~ll~~~ 262 (264)
T d1xqra1 254 FCEKLLQTC 262 (264)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 787777654
No 6
>d3bzka1 a.60.2.6 (A:474-563) Transcriptional accessory factor Tex {Pseudomonas aeruginosa [TaxId: 287]}
Probab=43.69 E-value=15 Score=25.03 Aligned_cols=27 Identities=11% Similarity=0.091 Sum_probs=19.6
Q ss_pred CCCccHHHHHHhCCCCCHHhHHHHHHH
Q 025836 150 DRDPAPRQVLLSLPCITPQDLLAFEDA 176 (247)
Q Consensus 150 p~~~~pr~VL~sLP~I~~~~l~~f~~~ 176 (247)
..+......|.++|||.+..-.+..+.
T Consensus 28 diN~As~~~L~~lpGig~~~A~~Iv~~ 54 (90)
T d3bzka1 28 DVNTASAALLARISGLNSTLAQNIVAH 54 (90)
T ss_dssp ETTTCCHHHHTTSTTCCHHHHHHHHHH
T ss_pred ehhhCCHHHHhHCCCCCHHHHHHHHHH
Confidence 356667888999999998865554443
No 7
>d1irza_ a.4.1.11 (A:) Arr10-B {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=24.60 E-value=81 Score=19.99 Aligned_cols=45 Identities=20% Similarity=0.198 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHhcCCCccHHHHHHh--CCCCCHHh----HHHHHHHHhc
Q 025836 135 ADLVGLCREIFIYMCDRDPAPRQVLLS--LPCITPQD----LLAFEDALTK 179 (247)
Q Consensus 135 ~eL~~L~~~Iy~~l~p~~~~pr~VL~s--LP~I~~~~----l~~f~~~L~~ 179 (247)
.|+=..+...+..|+....+|..||.- .||+|.+. ++.|--+|.+
T Consensus 12 ~elH~~Fv~Av~~lG~~~atpk~I~~~m~v~~lT~~qV~SHlQKYrl~l~k 62 (64)
T d1irza_ 12 HELHNKFLAAVDHLGVERAVPKKILDLMNVDKLTRENVASHLQKFRVALKK 62 (64)
T ss_dssp HHHHHHHHHHHHHHCTTTCCHHHHHHHHCCTTCCHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhCccccchHHHHHHcCCCCCCHHHHHHHHHHHHHHHHh
Confidence 456666777788889888999998654 89999874 4555555443
No 8
>d1xm9a1 a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.36 E-value=1.4e+02 Score=22.63 Aligned_cols=80 Identities=14% Similarity=0.177 Sum_probs=48.6
Q ss_pred CchhHHHHHHHHHHHHHHHHhcccchH-hhHHHHHHHHHHHHHHhcCCCccHHHHHHhCCCCCHHhHHHHHHHHhcCCCh
Q 025836 105 NNIELQQFVSKDLFSAIIRGLALESNA-VISADLVGLCREIFIYMCDRDPAPRQVLLSLPCITPQDLLAFEDALTKTASP 183 (247)
Q Consensus 105 ~~~~l~efi~~ev~~a~L~~L~~~~f~-d~q~eL~~L~~~Iy~~l~p~~~~pr~VL~sLP~I~~~~l~~f~~~L~~~~s~ 183 (247)
.+++.++.+....++.++..|...... ....+...-+......+...++.-++.+ +...-++.+.+.+.+.+++
T Consensus 360 ~~~~~~~~i~~~~i~~li~~L~~~~~~~~~~~~v~~~a~~~L~~l~~~~~~~~~~l-----~~~g~i~~L~~l~~~~~~~ 434 (457)
T d1xm9a1 360 RHPLLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQY-----FSSSMLNNIINLCRSSASP 434 (457)
T ss_dssp TSGGGHHHHHHHTHHHHHHTTTSCCSCSTTHHHHHHHHHHHHHHHHTTCTHHHHHH-----CCHHHHHHHHHHHHCTTCH
T ss_pred hChhHHHHHHHhhHHHHHHHHhccccCcCCcHHHHHHHHHHHHHHhcCCHHHHHHH-----HHCCCHHHHHHHHhCCCCH
Confidence 345566777777778888777433221 1223333333333333444555556655 3566788899888888888
Q ss_pred HHHHHH
Q 025836 184 REQKQH 189 (247)
Q Consensus 184 K~QR~l 189 (247)
+.|++.
T Consensus 435 ~~~~aA 440 (457)
T d1xm9a1 435 KAAEAA 440 (457)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 888875
No 9
>d1syya_ a.25.1.2 (A:) Ribonucleotide reductase R2 {Chlamydia trachomatis [TaxId: 813]}
Probab=22.95 E-value=55 Score=26.52 Aligned_cols=72 Identities=8% Similarity=0.089 Sum_probs=49.1
Q ss_pred CchhHHHHHHHHHHHHHHHHhcccchHhhHHHHHHHHHHHHHHhcCCCccHHHHHH-hCCCCCHHhHHHHHHHHhc
Q 025836 105 NNIELQQFVSKDLFSAIIRGLALESNAVISADLVGLCREIFIYMCDRDPAPRQVLL-SLPCITPQDLLAFEDALTK 179 (247)
Q Consensus 105 ~~~~l~efi~~ev~~a~L~~L~~~~f~d~q~eL~~L~~~Iy~~l~p~~~~pr~VL~-sLP~I~~~~l~~f~~~L~~ 179 (247)
.|..++-.++..++....+-..+....++..++..++.+.|.. .....+.++- .++|++.+++.+|-...++
T Consensus 224 RDE~lH~~f~~~l~~~l~~e~~e~~~~~~~~~i~el~~eav~~---E~~~~~~~~~~~~~Gl~~~~l~~Yv~y~an 296 (317)
T d1syya_ 224 RDETIHLNFGIDLINGIKEENPEIWTPELQQEIVELIKRAVDL---EIEYAQDCLPRGILGLRASMFIDYVQHIAD 296 (317)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHH---HHHHHHHHCSSCBTTBCHHHHHHHHHHHHH
T ss_pred hhHHHHhhHHHHHHHHHhhhhHHHHhhhhHHHHHHHHHHHHHH---HHHHHHHHcCCCCCCCCHHHHHHHHHHHHH
Confidence 4666777777778887776655544555777788888877654 1222222321 4789999999999988876
No 10
>d1orna_ a.96.1.1 (A:) Endonuclease III {Escherichia coli [TaxId: 562]}
Probab=22.86 E-value=61 Score=24.87 Aligned_cols=45 Identities=16% Similarity=0.206 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHHhcCCCccHHHHHHhCCCCCHHhHHHHHHHHhc
Q 025836 135 ADLVGLCREIFIYMCDRDPAPRQVLLSLPCITPQDLLAFEDALTK 179 (247)
Q Consensus 135 ~eL~~L~~~Iy~~l~p~~~~pr~VL~sLP~I~~~~l~~f~~~L~~ 179 (247)
+-+..++..|...+....|.-++-|++||||-++--+..-...-+
T Consensus 88 ~~l~~~a~~i~~~~~g~vp~~~~~L~~LpGVG~kTA~~il~~a~~ 132 (214)
T d1orna_ 88 RNIQKLCAMLIDKYNGEVPRDRDELMKLPGVGRKTANVVVSVAFG 132 (214)
T ss_dssp HHHHHHHHHHHHHSTTSCCSCHHHHTTSTTCCHHHHHHHHHHHHC
T ss_pred HHHHHHhhhHHHHhCCCCCCCHHHHHhCcCcccchHHHHHHHHhc
Confidence 346666677778888888988999999999999866666555433
No 11
>d1keaa_ a.96.1.2 (A:) Thymine-DNA glycosylase {Archaeon Methanobacterium thermoformicicum [TaxId: 145262]}
Probab=22.42 E-value=36 Score=26.42 Aligned_cols=62 Identities=19% Similarity=0.179 Sum_probs=41.3
Q ss_pred HHHHHHHHHhcccchHhhHHHHHHHHHHHHHHhcCCCccHHHHHHhCCCCCHHhHHHHHHHHhc
Q 025836 116 DLFSAIIRGLALESNAVISADLVGLCREIFIYMCDRDPAPRQVLLSLPCITPQDLLAFEDALTK 179 (247)
Q Consensus 116 ev~~a~L~~L~~~~f~d~q~eL~~L~~~Iy~~l~p~~~~pr~VL~sLP~I~~~~l~~f~~~L~~ 179 (247)
+-+..+|+++.-.. -=-.-|..++..|...+....|.-+.-|++||||-++--+..-...-+
T Consensus 74 ~~l~~~i~~~G~~~--~KA~~l~~~a~~i~~~~~g~~p~~~~~L~~LpGVG~kTA~~il~~~~~ 135 (217)
T d1keaa_ 74 SEIAKDIKEIGLSN--QRAEQLKELARVVINDYGGRVPRNRKAILDLPGVGKYTCAAVMCLAFG 135 (217)
T ss_dssp HHHHHHTGGGSCHH--HHHHHHHHHHHHHHHHHTTSCCSCHHHHHTSTTCCHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhhh--HHHHHHHHHHHHHHhhccCCcchhhHHHHHHHhhhhhhhHHHHHHhcC
Confidence 44555566653321 122235566666667778788899999999999999977766665533
No 12
>d1mxra_ a.25.1.2 (A:) Ribonucleotide reductase R2 {Escherichia coli [TaxId: 562]}
Probab=22.24 E-value=60 Score=26.61 Aligned_cols=72 Identities=10% Similarity=0.045 Sum_probs=49.6
Q ss_pred CchhHHHHHHHHHHHHHHHHhcccchHh----hHHHHHHHHHHHHHHhcCCCccHHHHHH--hCCCCCHHhHHHHHHHHh
Q 025836 105 NNIELQQFVSKDLFSAIIRGLALESNAV----ISADLVGLCREIFIYMCDRDPAPRQVLL--SLPCITPQDLLAFEDALT 178 (247)
Q Consensus 105 ~~~~l~efi~~ev~~a~L~~L~~~~f~d----~q~eL~~L~~~Iy~~l~p~~~~pr~VL~--sLP~I~~~~l~~f~~~L~ 178 (247)
.|..++-..+..+++...+-+..+.... .++++..++.+.+.. .....+.++. ++.|++.+++.+|-...+
T Consensus 236 RDE~lH~~~~~~l~~~l~~~~~~~~~~~~~~e~~~~i~~~~~eave~---E~~~~~~~~~~~~l~Gl~~~~~~~yi~y~a 312 (339)
T d1mxra_ 236 RDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQ---EKDWADYLFRDGSMIGLNKDILCQYVEYIT 312 (339)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHTHHHHHHHHHHHHHH---HHHHHHHHTTTCCBTTBSHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHhcCChhhHHHhHHHHHHHHHHHHHHHHHH---HHHHHHHHccCCCcCCCCHHHHHHHHHHHH
Confidence 4666776777778887777665555443 555677777777654 3344444443 578999999999998887
Q ss_pred c
Q 025836 179 K 179 (247)
Q Consensus 179 ~ 179 (247)
+
T Consensus 313 n 313 (339)
T d1mxra_ 313 N 313 (339)
T ss_dssp H
T ss_pred H
Confidence 7
No 13
>d2q0zx1 a.289.1.1 (X:33-208) Protein pro2281 {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.82 E-value=89 Score=22.67 Aligned_cols=37 Identities=22% Similarity=0.275 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHHhcCCCccHHHHHHhCCCCCHHhHHHHHH
Q 025836 135 ADLVGLCREIFIYMCDRDPAPRQVLLSLPCITPQDLLAFED 175 (247)
Q Consensus 135 ~eL~~L~~~Iy~~l~p~~~~pr~VL~sLP~I~~~~l~~f~~ 175 (247)
..++.|+.-|--.+-+.. .| |+|+|+++++.+.++..
T Consensus 101 ~~~l~l~q~i~q~~w~~~-~~---L~Qlp~~~~~~~~kl~~ 137 (176)
T d2q0zx1 101 LAAMELAQMVTQAMWSKD-SY---LKQLPHFTSEHIKRCTD 137 (176)
T ss_dssp HHHHHHHHHHHHTCCTTS-CG---GGGSTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCC-CC---ccCCCcCCHHHHHHHHH
Confidence 346667766666665543 33 78999999999988764
No 14
>d2abka_ a.96.1.1 (A:) Endonuclease III {Escherichia coli [TaxId: 562]}
Probab=21.36 E-value=50 Score=25.45 Aligned_cols=63 Identities=16% Similarity=0.216 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHhcccchHhhHH-HHHHHHHHHHHHhcCCCccHHHHHHhCCCCCHHhHHHHHHHHhc
Q 025836 114 SKDLFSAIIRGLALESNAVISA-DLVGLCREIFIYMCDRDPAPRQVLLSLPCITPQDLLAFEDALTK 179 (247)
Q Consensus 114 ~~ev~~a~L~~L~~~~f~d~q~-eL~~L~~~Iy~~l~p~~~~pr~VL~sLP~I~~~~l~~f~~~L~~ 179 (247)
..+-+..+|+++.-.+ .-+ -+..++..|...+.-..|..++-|++||||-++--+..-...-+
T Consensus 68 ~~~~l~~~i~~~G~y~---~Ka~~l~~~a~~i~~~~~g~~p~~~~~L~~LpGVG~~TA~~Il~~a~~ 131 (211)
T d2abka_ 68 GVEGVKTYIKTIGLYN---SKAENIIKTCRILLEQHNGEVPEDRAALEALPGVGRKTANVVLNTAFG 131 (211)
T ss_dssp HHHHHHHHHTTSTTHH---HHHHHHHHHHHHHHHHTTTSCCSCHHHHHHSTTCCHHHHHHHHHHHHC
T ss_pred hHhHhHHHHHHhhhhh---hHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHhhchHHHHHHHHHHhc
Confidence 3444556777665432 222 35556666677788888999999999999999976666555433
No 15
>d1fc2c_ a.8.1.1 (C:) Immunoglobulin-binding protein A modules {Staphylococcus aureus [TaxId: 1280]}
Probab=21.36 E-value=34 Score=20.39 Aligned_cols=21 Identities=24% Similarity=0.401 Sum_probs=16.7
Q ss_pred HhCCCCCHHhHHHHHHHHhcC
Q 025836 160 LSLPCITPQDLLAFEDALTKT 180 (247)
Q Consensus 160 ~sLP~I~~~~l~~f~~~L~~~ 180 (247)
+.+||++++....|...|..-
T Consensus 13 l~lPNLne~Qrn~fI~SLkDD 33 (44)
T d1fc2c_ 13 LHLPNLNEEQRNGFIQSLKDD 33 (44)
T ss_dssp HTCSSSCTHHHHHHHHHHHHC
T ss_pred HhCCCCCHHHHHHHHHHhccC
Confidence 468888888888888888663
No 16
>d1w9ca_ a.118.1.19 (A:) Exportin-1 (Xpo1, Crm1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.02 E-value=2e+02 Score=23.34 Aligned_cols=39 Identities=21% Similarity=0.296 Sum_probs=32.0
Q ss_pred hCCCCCHHhHHHHHHHHhcC-CChHHHHHHHHHHHhccCC
Q 025836 161 SLPCITPQDLLAFEDALTKT-ASPREQKQHMRSLLVSGTG 199 (247)
Q Consensus 161 sLP~I~~~~l~~f~~~L~~~-~s~K~QR~l~~~LL~~~~g 199 (247)
.-|+++++.+..|-..|-+. .....=|.+++|||-.+++
T Consensus 279 ~Fp~l~~~qi~~fv~~Lf~~~~d~~~Fk~~lrDFLI~~ke 318 (321)
T d1w9ca_ 279 AFPHLQDAQVKLFVTGLFSLNQDIPAFKEHLRDFLVQIKE 318 (321)
T ss_dssp HCTTSCHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHT
T ss_pred hCCCCCHHHHHHHHHHHHHccCCHHHHHHHHHHHhHHhhh
Confidence 46999999999999999764 4466778899999987654
Done!