Query 025840
Match_columns 247
No_of_seqs 215 out of 2219
Neff 8.2
Searched_HMMs 46136
Date Fri Mar 29 10:09:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025840.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/025840hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PTZ00330 acetyltransferase; Pr 99.7 9.2E-16 2E-20 120.3 16.1 126 103-239 6-144 (147)
2 PRK10146 aminoalkylphosphonic 99.7 2.3E-15 4.9E-20 117.7 13.0 122 104-236 4-138 (144)
3 PF00583 Acetyltransf_1: Acety 99.6 1.9E-15 4.2E-20 107.0 9.0 74 159-232 2-83 (83)
4 PRK03624 putative acetyltransf 99.6 2.3E-14 4.9E-19 110.6 13.7 120 104-236 3-130 (140)
5 PRK07922 N-acetylglutamate syn 99.6 1.3E-14 2.7E-19 117.7 12.1 128 103-243 5-134 (169)
6 TIGR03827 GNAT_ablB putative b 99.6 3.3E-14 7.2E-19 123.3 15.4 124 104-238 116-247 (266)
7 PRK09491 rimI ribosomal-protei 99.6 6.6E-14 1.4E-18 110.1 15.0 121 104-236 2-125 (146)
8 TIGR02382 wecD_rffC TDP-D-fuco 99.6 3.2E-14 7E-19 117.3 13.7 77 160-236 106-185 (191)
9 PRK10140 putative acetyltransf 99.6 1E-13 2.2E-18 110.2 15.7 126 102-240 2-145 (162)
10 PF13673 Acetyltransf_10: Acet 99.6 8.8E-14 1.9E-18 104.7 14.2 67 160-231 51-117 (117)
11 PRK07757 acetyltransferase; Pr 99.6 7.1E-14 1.5E-18 110.5 14.2 117 104-236 2-122 (152)
12 PF13508 Acetyltransf_7: Acety 99.6 1.6E-14 3.4E-19 102.2 9.2 70 160-233 10-79 (79)
13 KOG3139 N-acetyltransferase [G 99.6 6E-14 1.3E-18 110.1 12.9 73 164-236 68-146 (165)
14 PF13527 Acetyltransf_9: Acety 99.6 4.6E-14 1E-18 108.1 12.2 115 106-234 2-127 (127)
15 TIGR01575 rimI ribosomal-prote 99.6 1.7E-13 3.7E-18 104.6 14.9 113 114-238 2-118 (131)
16 TIGR03103 trio_acet_GNAT GNAT- 99.6 1.7E-13 3.6E-18 129.9 17.9 117 110-236 90-217 (547)
17 PRK10314 putative acyltransfer 99.6 3.4E-14 7.4E-19 113.4 10.6 78 160-237 55-135 (153)
18 PRK10975 TDP-fucosamine acetyl 99.6 1.8E-13 3.8E-18 113.1 15.0 79 160-238 109-190 (194)
19 PLN02706 glucosamine 6-phospha 99.5 1.8E-13 4E-18 107.9 14.4 77 161-237 63-145 (150)
20 COG1246 ArgA N-acetylglutamate 99.5 1.2E-13 2.6E-18 108.3 12.5 116 106-236 3-123 (153)
21 KOG3216 Diamine acetyltransfer 99.5 4E-13 8.6E-18 104.4 14.3 128 102-236 2-146 (163)
22 PRK09831 putative acyltransfer 99.5 2E-13 4.2E-18 107.8 12.4 69 160-238 60-128 (147)
23 TIGR02406 ectoine_EctA L-2,4-d 99.5 4.5E-13 9.7E-18 107.2 14.5 118 107-236 2-128 (157)
24 PHA00673 acetyltransferase dom 99.5 6.3E-13 1.4E-17 105.3 13.2 115 109-235 12-145 (154)
25 TIGR03448 mycothiol_MshD mycot 99.5 6.7E-13 1.5E-17 116.0 14.7 76 161-236 208-288 (292)
26 COG0456 RimI Acetyltransferase 99.5 1.2E-12 2.6E-17 105.6 13.2 75 163-237 72-155 (177)
27 PRK12308 bifunctional arginino 99.4 1.5E-12 3.3E-17 125.1 13.8 119 104-238 464-586 (614)
28 TIGR01890 N-Ac-Glu-synth amino 99.4 3E-12 6.5E-17 118.3 13.7 118 105-237 284-406 (429)
29 PF13420 Acetyltransf_4: Acety 99.4 1.4E-11 3E-16 97.4 14.9 125 106-242 1-145 (155)
30 TIGR01686 FkbH FkbH-like domai 99.4 1.1E-11 2.5E-16 110.2 16.0 123 104-234 187-319 (320)
31 PF13523 Acetyltransf_8: Acety 99.4 5.9E-12 1.3E-16 99.5 12.7 121 106-238 1-143 (152)
32 KOG3396 Glucosamine-phosphate 99.4 8.6E-12 1.9E-16 95.1 12.8 78 159-236 61-144 (150)
33 COG3153 Predicted acetyltransf 99.4 3.5E-12 7.5E-17 102.7 11.0 124 103-241 3-136 (171)
34 PRK05279 N-acetylglutamate syn 99.4 4.3E-12 9.3E-17 117.6 13.1 118 104-236 295-417 (441)
35 cd02169 Citrate_lyase_ligase C 99.4 1.9E-12 4.1E-17 113.7 9.7 71 160-235 13-83 (297)
36 PLN02825 amino-acid N-acetyltr 99.4 6.4E-12 1.4E-16 117.5 13.3 116 106-236 370-490 (515)
37 PRK10514 putative acetyltransf 99.4 1.6E-11 3.4E-16 96.1 12.7 114 104-238 2-128 (145)
38 PRK13688 hypothetical protein; 99.3 3.9E-12 8.5E-17 101.8 8.5 82 160-246 52-147 (156)
39 KOG2488 Acetyltransferase (GNA 99.3 1.6E-11 3.6E-16 98.8 11.1 115 116-240 66-186 (202)
40 PRK01346 hypothetical protein; 99.3 2.6E-11 5.6E-16 111.3 13.5 120 103-236 6-136 (411)
41 COG1247 Sortase and related ac 99.3 9.6E-11 2.1E-15 94.2 14.1 126 104-239 2-146 (169)
42 PRK10562 putative acetyltransf 99.3 4.4E-11 9.5E-16 93.9 11.9 68 160-236 55-125 (145)
43 PRK10151 ribosomal-protein-L7/ 99.3 1.6E-10 3.4E-15 93.9 15.0 121 104-237 11-156 (179)
44 PHA01807 hypothetical protein 99.3 5.2E-11 1.1E-15 94.9 11.7 70 160-229 60-136 (153)
45 TIGR03448 mycothiol_MshD mycot 99.3 2.4E-11 5.1E-16 106.3 10.7 75 160-236 53-128 (292)
46 PF08445 FR47: FR47-like prote 99.3 4.5E-11 9.7E-16 86.2 10.0 70 161-235 9-81 (86)
47 PRK10809 ribosomal-protein-S5- 99.3 2.4E-10 5.1E-15 94.1 15.1 76 160-236 84-166 (194)
48 PRK15130 spermidine N1-acetylt 99.3 2.5E-10 5.4E-15 93.3 14.7 122 102-236 5-145 (186)
49 PF12746 GNAT_acetyltran: GNAT 99.2 1.1E-10 2.4E-15 100.6 12.3 154 51-236 82-247 (265)
50 PF13302 Acetyltransf_3: Acety 99.2 1.2E-09 2.6E-14 84.6 14.6 118 104-232 2-142 (142)
51 TIGR00124 cit_ly_ligase [citra 99.2 2.5E-10 5.5E-15 101.8 11.8 74 160-238 38-111 (332)
52 TIGR03585 PseH pseudaminic aci 99.2 4.8E-10 1.1E-14 88.5 12.1 78 160-239 58-141 (156)
53 COG2153 ElaA Predicted acyltra 99.1 2E-10 4.4E-15 88.7 8.2 78 160-237 57-137 (155)
54 COG3393 Predicted acetyltransf 99.1 3.3E-10 7.1E-15 96.0 9.3 77 160-236 184-262 (268)
55 KOG3235 Subunit of the major N 99.0 8.5E-10 1.8E-14 86.4 7.3 80 160-239 49-138 (193)
56 KOG3138 Predicted N-acetyltran 99.0 1.1E-09 2.4E-14 89.3 8.3 122 104-236 17-152 (187)
57 TIGR01211 ELP3 histone acetylt 99.0 1.6E-09 3.5E-14 101.8 10.1 79 160-238 421-518 (522)
58 PF12568 DUF3749: Acetyltransf 99.0 3.2E-08 6.9E-13 75.4 13.8 112 111-238 9-127 (128)
59 KOG3397 Acetyltransferases [Ge 98.9 2.7E-08 5.9E-13 79.1 10.8 77 159-236 63-141 (225)
60 cd04301 NAT_SF N-Acyltransfera 98.8 2.2E-08 4.7E-13 65.4 7.4 57 160-216 6-64 (65)
61 COG1670 RimL Acetyltransferase 98.7 6.5E-08 1.4E-12 77.7 9.5 77 161-238 76-160 (187)
62 KOG3234 Acetyltransferase, (GN 98.7 6.7E-08 1.5E-12 75.8 8.4 76 160-235 49-130 (173)
63 PF08444 Gly_acyl_tr_C: Aralky 98.6 1.9E-07 4.2E-12 66.9 8.1 82 159-245 5-89 (89)
64 PF13718 GNAT_acetyltr_2: GNAT 98.5 2.2E-06 4.7E-11 70.8 12.8 58 178-235 91-175 (196)
65 KOG4144 Arylalkylamine N-acety 98.5 1.4E-07 3E-12 73.8 3.8 77 160-236 69-161 (190)
66 PF14542 Acetyltransf_CG: GCN5 98.4 1.9E-06 4E-11 60.9 8.5 66 160-228 6-71 (78)
67 COG3981 Predicted acetyltransf 98.4 7.5E-07 1.6E-11 71.1 6.3 76 160-236 76-159 (174)
68 COG3053 CitC Citrate lyase syn 98.3 1.1E-05 2.3E-10 69.6 11.1 79 160-243 44-122 (352)
69 COG3818 Predicted acetyltransf 98.3 8.2E-06 1.8E-10 62.3 9.1 62 175-236 82-148 (167)
70 COG2388 Predicted acetyltransf 98.1 8.2E-06 1.8E-10 60.0 5.3 59 160-218 22-80 (99)
71 COG0454 WecD Histone acetyltra 98.0 1.3E-05 2.9E-10 57.1 5.7 44 183-231 87-130 (156)
72 COG1444 Predicted P-loop ATPas 98.0 1.2E-05 2.5E-10 78.1 6.2 58 178-236 532-591 (758)
73 COG4552 Eis Predicted acetyltr 97.9 2.2E-05 4.7E-10 69.4 5.4 74 161-236 47-127 (389)
74 PF06852 DUF1248: Protein of u 97.9 0.001 2.2E-08 54.3 14.5 113 113-236 14-137 (181)
75 KOG4135 Predicted phosphogluco 97.3 0.00065 1.4E-08 53.1 6.3 60 177-236 107-170 (185)
76 PF01233 NMT: Myristoyl-CoA:pr 97.2 0.011 2.4E-07 47.0 12.2 112 82-215 17-148 (162)
77 TIGR03694 exosort_acyl putativ 97.2 0.0037 8E-08 53.5 9.9 60 177-236 111-198 (241)
78 PF00765 Autoind_synth: Autoin 97.2 0.013 2.8E-07 48.1 12.6 78 161-238 53-157 (182)
79 PF13480 Acetyltransf_6: Acety 97.2 0.008 1.7E-07 45.8 10.9 57 161-218 79-135 (142)
80 PRK13834 putative autoinducer 97.0 0.0077 1.7E-07 50.4 10.3 77 160-236 61-165 (207)
81 COG1243 ELP3 Histone acetyltra 96.9 0.0014 3.1E-08 60.1 5.3 52 186-237 459-510 (515)
82 COG5628 Predicted acetyltransf 96.9 0.0031 6.7E-08 47.6 5.7 70 161-232 45-119 (143)
83 PF04958 AstA: Arginine N-succ 96.7 0.021 4.5E-07 51.2 10.9 120 103-232 1-184 (342)
84 COG3375 Uncharacterized conser 96.4 0.032 6.9E-07 46.8 9.2 94 113-217 13-114 (266)
85 PRK10456 arginine succinyltran 96.4 0.04 8.7E-07 49.3 10.5 90 104-203 2-145 (344)
86 PF13880 Acetyltransf_13: ESCO 96.2 0.0062 1.3E-07 41.8 3.6 29 178-206 6-34 (70)
87 cd04264 DUF619-NAGS DUF619 dom 96.1 0.033 7.1E-07 41.0 7.1 79 161-245 16-99 (99)
88 PF05301 Mec-17: Touch recepto 96.1 0.034 7.4E-07 42.1 7.2 82 160-242 16-112 (120)
89 COG3916 LasI N-acyl-L-homoseri 95.9 0.15 3.2E-06 42.3 10.9 76 160-235 60-162 (209)
90 KOG2535 RNA polymerase II elon 95.8 0.013 2.7E-07 52.2 4.5 51 188-238 498-549 (554)
91 PRK01305 arginyl-tRNA-protein 95.6 0.4 8.8E-06 41.0 12.8 81 125-217 124-207 (240)
92 TIGR03244 arg_catab_AstA argin 95.6 0.13 2.8E-06 46.0 10.1 88 106-203 2-143 (336)
93 TIGR03245 arg_AOST_alph argini 95.6 0.13 2.8E-06 45.9 10.1 88 106-203 2-144 (336)
94 PF04377 ATE_C: Arginine-tRNA- 95.6 0.18 3.9E-06 38.9 9.7 57 160-217 46-102 (128)
95 cd04265 DUF619-NAGS-U DUF619 d 95.5 0.069 1.5E-06 39.3 6.8 79 161-245 17-99 (99)
96 TIGR03243 arg_catab_AOST argin 95.4 0.17 3.7E-06 45.1 10.1 88 106-203 2-143 (335)
97 PF01853 MOZ_SAS: MOZ/SAS fami 95.4 0.042 9.2E-07 45.0 5.8 50 161-210 64-113 (188)
98 COG3882 FkbH Predicted enzyme 95.3 0.095 2.1E-06 48.8 8.4 126 104-236 414-550 (574)
99 PLN03238 probable histone acet 94.7 0.076 1.6E-06 46.2 5.7 51 160-210 138-188 (290)
100 PF04768 DUF619: Protein of un 94.6 0.32 6.9E-06 39.4 8.9 120 107-245 26-153 (170)
101 KOG2036 Predicted P-loop ATPas 93.9 0.13 2.9E-06 49.8 6.1 32 178-209 615-646 (1011)
102 COG5630 ARG2 Acetylglutamate s 93.6 0.31 6.7E-06 44.0 7.4 120 110-245 343-469 (495)
103 PLN03239 histone acetyltransfe 93.3 0.15 3.2E-06 45.6 4.9 51 160-210 196-246 (351)
104 KOG2779 N-myristoyl transferas 93.1 0.47 1E-05 42.5 7.7 52 160-211 143-201 (421)
105 TIGR03019 pepcterm_femAB FemAB 93.1 1.3 2.9E-05 39.4 10.9 77 161-238 204-283 (330)
106 PTZ00064 histone acetyltransfe 92.6 0.18 3.9E-06 47.1 4.7 51 160-210 367-417 (552)
107 COG2401 ABC-type ATPase fused 92.0 0.11 2.4E-06 47.8 2.5 57 178-234 242-306 (593)
108 cd04266 DUF619-NAGS-FABP DUF61 91.7 1.3 2.8E-05 33.1 7.5 82 161-245 17-108 (108)
109 PRK14852 hypothetical protein; 91.5 1.4 3E-05 45.0 9.7 61 176-236 120-181 (989)
110 PLN00104 MYST -like histone ac 91.5 0.18 3.8E-06 46.7 3.2 51 160-210 289-339 (450)
111 KOG2747 Histone acetyltransfer 90.8 0.17 3.7E-06 46.0 2.4 48 160-208 244-291 (396)
112 COG3138 AstA Arginine/ornithin 90.7 1.1 2.4E-05 39.0 7.1 86 105-200 3-142 (336)
113 PF02474 NodA: Nodulation prot 90.6 0.61 1.3E-05 37.6 5.1 53 177-230 85-137 (196)
114 KOG2696 Histone acetyltransfer 90.5 0.74 1.6E-05 41.5 6.1 54 164-217 200-258 (403)
115 PF12261 T_hemolysin: Thermost 88.5 2.9 6.4E-05 34.1 7.7 55 177-235 87-141 (179)
116 PF09390 DUF1999: Protein of u 88.1 11 0.00024 29.6 11.5 119 105-235 2-140 (161)
117 KOG4601 Uncharacterized conser 85.3 4.5 9.7E-05 34.3 7.2 72 161-233 80-165 (264)
118 PF04339 DUF482: Protein of un 84.7 27 0.00059 31.9 12.7 117 109-241 210-334 (370)
119 PF11124 Pho86: Inorganic phos 84.2 6.1 0.00013 34.8 7.9 75 161-235 177-270 (304)
120 PRK04531 acetylglutamate kinas 83.2 9 0.00019 35.3 9.0 117 106-245 256-375 (398)
121 TIGR03827 GNAT_ablB putative b 81.9 3.6 7.8E-05 35.4 5.8 44 193-236 21-64 (266)
122 COG5027 SAS2 Histone acetyltra 81.6 0.46 1E-05 42.4 0.0 40 163-202 248-287 (395)
123 PF13444 Acetyltransf_5: Acety 81.0 4 8.7E-05 29.7 4.9 24 176-199 77-100 (101)
124 cd03173 DUF619-like DUF619 dom 79.6 16 0.00035 26.7 7.6 79 161-245 17-98 (98)
125 PHA01733 hypothetical protein 78.6 6.3 0.00014 31.2 5.5 79 161-242 55-138 (153)
126 COG2935 Putative arginyl-tRNA: 78.1 12 0.00026 32.1 7.4 86 128-217 128-214 (253)
127 COG5092 NMT1 N-myristoyl trans 76.3 19 0.00042 32.0 8.3 51 161-211 142-199 (451)
128 PF09924 DUF2156: Uncharacteri 75.3 11 0.00024 32.9 6.9 57 161-217 189-245 (299)
129 PRK00756 acyltransferase NodA; 74.0 8.5 0.00018 31.0 5.1 58 177-235 85-145 (196)
130 PF12953 DUF3842: Domain of un 65.4 13 0.00029 28.6 4.4 54 188-242 6-59 (131)
131 PHA00432 internal virion prote 64.7 48 0.001 25.8 7.4 70 161-236 45-121 (137)
132 PRK02983 lysS lysyl-tRNA synth 63.3 34 0.00074 35.8 8.3 58 159-217 427-484 (1094)
133 PHA02769 hypothetical protein; 62.1 8.2 0.00018 29.1 2.7 43 195-237 94-140 (154)
134 TIGR02990 ectoine_eutA ectoine 58.4 18 0.0004 30.8 4.6 42 195-236 104-151 (239)
135 COG2898 Uncharacterized conser 56.4 45 0.00097 32.0 7.2 58 159-217 399-457 (538)
136 KOG3014 Protein involved in es 54.0 42 0.0009 28.9 5.9 32 177-208 183-214 (257)
137 KOG3698 Hyaluronoglucosaminida 53.4 22 0.00048 34.3 4.5 54 183-236 822-878 (891)
138 PF07395 Mig-14: Mig-14; Inte 51.1 72 0.0016 27.7 7.0 55 161-215 181-242 (264)
139 COG3473 Maleate cis-trans isom 46.7 32 0.0007 28.9 4.1 34 202-235 109-148 (238)
140 cd04263 DUF619-NAGK-FABP DUF61 46.2 1.2E+02 0.0025 22.2 7.2 79 161-245 17-98 (98)
141 cd08356 Glo_EDI_BRP_like_17 Th 45.9 19 0.00042 26.2 2.5 18 220-237 13-30 (113)
142 PRK15312 antimicrobial resista 44.6 83 0.0018 27.8 6.4 54 161-214 211-271 (298)
143 cd07267 THT_Oxygenase_N N-term 42.6 28 0.0006 25.1 2.9 26 211-236 4-31 (113)
144 cd07043 STAS_anti-anti-sigma_f 41.6 69 0.0015 22.1 4.8 39 195-233 55-93 (99)
145 PF11039 DUF2824: Protein of u 40.4 1.8E+02 0.0038 22.7 7.2 74 160-236 45-122 (151)
146 TIGR00377 ant_ant_sig anti-ant 36.7 76 0.0016 22.6 4.5 40 195-234 60-99 (108)
147 cd08344 MhqB_like_N N-terminal 35.1 51 0.0011 23.6 3.3 27 210-236 2-30 (112)
148 TIGR02886 spore_II_AA anti-sig 33.6 1.3E+02 0.0027 21.5 5.2 39 195-233 56-94 (106)
149 cd08350 BLMT_like BLMT, a bleo 33.3 33 0.00071 25.0 2.0 18 220-237 14-31 (120)
150 cd07042 STAS_SulP_like_sulfate 31.6 1.3E+02 0.0028 21.0 5.0 41 195-235 58-98 (107)
151 cd06844 STAS Sulphate Transpor 30.8 1.3E+02 0.0027 21.3 4.8 39 195-233 56-94 (100)
152 PF09924 DUF2156: Uncharacteri 30.4 1E+02 0.0023 26.7 5.0 72 161-240 31-102 (299)
153 cd08362 BphC5-RrK37_N_like N-t 28.5 83 0.0018 22.4 3.5 27 210-236 3-32 (120)
154 COG0375 HybF Zn finger protein 28.0 1.5E+02 0.0032 22.4 4.7 34 193-226 5-47 (115)
155 cd07265 2_3_CTD_N N-terminal d 27.9 84 0.0018 22.7 3.5 26 211-236 5-33 (122)
156 KOG1472 Histone acetyltransfer 27.7 10 0.00023 37.4 -1.9 72 164-235 431-504 (720)
157 PF13466 STAS_2: STAS domain 27.0 1.8E+02 0.004 19.3 4.9 38 194-231 42-79 (80)
158 PF01740 STAS: STAS domain; I 26.7 1E+02 0.0022 22.3 3.7 39 195-233 65-103 (117)
159 cd07252 BphC1-RGP6_N_like N-te 26.7 61 0.0013 23.5 2.5 23 214-236 8-31 (120)
160 PF04339 DUF482: Protein of un 26.4 1.5E+02 0.0032 27.2 5.3 53 182-234 105-158 (370)
161 PRK01346 hypothetical protein; 25.5 5.1E+02 0.011 23.4 9.1 41 160-205 217-265 (411)
162 cd07240 ED_TypeI_classII_N N-t 24.6 1.2E+02 0.0026 21.4 3.7 27 211-237 3-32 (117)
163 PF02388 FemAB: FemAB family; 24.3 1.5E+02 0.0032 27.3 5.0 75 160-237 43-141 (406)
164 cd07041 STAS_RsbR_RsbS_like Su 23.6 2.4E+02 0.0051 20.1 5.2 39 195-233 58-96 (109)
165 PF08901 DUF1847: Protein of u 23.1 1.5E+02 0.0033 23.6 4.1 36 199-234 43-85 (157)
166 cd08361 PpCmtC_N N-terminal do 21.8 1.5E+02 0.0033 21.6 3.9 26 211-236 7-35 (124)
167 COG1212 KdsB CMP-2-keto-3-deox 21.2 1.8E+02 0.0038 24.9 4.4 41 195-235 27-68 (247)
168 PF02388 FemAB: FemAB family; 20.7 4.7E+02 0.01 24.0 7.6 56 161-217 301-356 (406)
169 COG1504 Uncharacterized conser 20.3 3.4E+02 0.0074 20.4 5.2 68 165-234 7-93 (121)
170 cd04789 HTH_Cfa Helix-Turn-Hel 20.2 92 0.002 22.6 2.3 27 219-245 14-40 (102)
No 1
>PTZ00330 acetyltransferase; Provisional
Probab=99.70 E-value=9.2e-16 Score=120.31 Aligned_cols=126 Identities=22% Similarity=0.314 Sum_probs=94.5
Q ss_pred EEEEecCCCCCHHHHHHHHHHcCCCC-CcHHHHHHHHhc-----c-eeEEEEEecccCCCCCCCCCCeEEEEEEEEeC--
Q 025840 103 QIIFSSGGDVDVYELQTLCDKVGWPR-RPLSKLAAALKN-----S-YLVATLHSIRKSPGSEGNEQRTLIGMARATSD-- 173 (247)
Q Consensus 103 ~i~~~~~~~~d~~~l~~l~~~~~w~~-~~~~~~~~~~~~-----~-~~v~~~~~~~~~~~~~~~~~g~iVG~~~~~~~-- 173 (247)
.+.++..+..|.+.+.+++....+.. .+.+.+...... . ..++.. .++|++||++.+...
T Consensus 6 ~~~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~vG~~~~~~~~~ 74 (147)
T PTZ00330 6 SLELRDLEEGDLGSVLELLSHLTSAPALSQEELEQIAARRRLAGVVTRVFVH-----------SPTQRIVGTASLFVEPK 74 (147)
T ss_pred eEEEEEcccccHHHHHHHHHHhcCCCccchhHHHHHHHHHhcCCCceEEEEE-----------eCCCEEEEEEEEEeccc
Confidence 46788888899999999887654432 233333322221 1 112221 248999999987532
Q ss_pred ----CCCcEEEEEEEECCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEeCHhhHHHHHhCCCeecCCcee
Q 025840 174 ----HAFNATIWDVLVDPSYQGQGLGKALVEKVVRALLQKDIGNISLFADSQVVDFYRNLGFEPDPEGIK 239 (247)
Q Consensus 174 ----~~~~~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g~~~i~L~~n~~a~~fY~k~GF~~~~~~~~ 239 (247)
+...++|..++|+|+|||+|+|++|++++++.+++.|+..+.+.+|..|++||+|+||+..+.+..
T Consensus 75 ~~~~~~~~~~i~~~~V~~~~rg~Gig~~l~~~~~~~a~~~~~~~l~l~~n~~a~~~y~k~GF~~~~~~~~ 144 (147)
T PTZ00330 75 FTRGGKCVGHIEDVVVDPSYRGQGLGRALISDLCEIARSSGCYKVILDCTEDMVAFYKKLGFRACERQMR 144 (147)
T ss_pred cccCCCceEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEecChHHHHHHHHCCCEEeceEEE
Confidence 112478999999999999999999999999999999999999999999999999999999875543
No 2
>PRK10146 aminoalkylphosphonic acid N-acetyltransferase; Provisional
Probab=99.66 E-value=2.3e-15 Score=117.69 Aligned_cols=122 Identities=15% Similarity=0.168 Sum_probs=88.6
Q ss_pred EEEecCCCCCHHHHHHHHHHcC---CCCCc-HHHHHHHHhc-ceeEEEEEecccCCCCCCCCCCeEEEEEEEEeCC----
Q 025840 104 IIFSSGGDVDVYELQTLCDKVG---WPRRP-LSKLAAALKN-SYLVATLHSIRKSPGSEGNEQRTLIGMARATSDH---- 174 (247)
Q Consensus 104 i~~~~~~~~d~~~l~~l~~~~~---w~~~~-~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~g~iVG~~~~~~~~---- 174 (247)
+.++.++..|.+.+.++..... |.... .+.+...+.+ ...+.++ +++|++||++.+....
T Consensus 4 ~~ir~a~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~-----------~~~~~ivG~~~~~~~~~~~~ 72 (144)
T PRK10146 4 CELRPATQYDTDAVYALICELKQAEFDHQAFRVGFNANLRDPNMRYHLA-----------LLDGEVVGMIGLHLQFHLHH 72 (144)
T ss_pred cEEeeCcHhhHHHHHHHHHHHhcccCCHHHHHHHHHHHhcCCCceEEEE-----------EECCEEEEEEEEEecccccc
Confidence 5677778889999888876532 22111 1233333322 2222222 2489999999875421
Q ss_pred -CCcEEEEEEEECCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEe---CHhhHHHHHhCCCeecCC
Q 025840 175 -AFNATIWDVLVDPSYQGQGLGKALVEKVVRALLQKDIGNISLFA---DSQVVDFYRNLGFEPDPE 236 (247)
Q Consensus 175 -~~~~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g~~~i~L~~---n~~a~~fY~k~GF~~~~~ 236 (247)
...++|..++|+|+|||+|+|+.|++++++.|++.|+..+.|++ |..|++||+++||+..+.
T Consensus 73 ~~~~~~i~~l~v~p~~rg~GiG~~Ll~~~~~~a~~~~~~~i~l~~~~~n~~a~~fY~~~Gf~~~~~ 138 (144)
T PRK10146 73 VNWIGEIQELVVMPQARGLNVGSKLLAWAEEEARQAGAEMTELSTNVKRHDAHRFYLREGYEQSHF 138 (144)
T ss_pred cchhheeheeEECHHHcCCCHHHHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHcCCchhhh
Confidence 12367999999999999999999999999999999999999986 678999999999988753
No 3
>PF00583 Acetyltransf_1: Acetyltransferase (GNAT) family; InterPro: IPR000182 The N-acetyltransferases (NAT) (EC 2.3.1.-) are enzymes that use acetyl coenzyme A (CoA) to transfer an acetyl group to a substrate, a reaction implicated in various functions from bacterial antibiotic resistance to mammalian circadian rhythm and chromatin remodeling. The Gcn5-related N-acetyltransferases (GNAT) catalyze the transfer of the acetyl from the CoA donor to a primary amine of the acceptor. The GNAT proteins share a domain composed of four conserved sequence motifs A-D [, ]. This GNAT domain is named after yeast GCN5 (from General Control Nonrepressed) and related histone acetyltransferases (HATs) like Hat1 and PCAF. HATs acetylate lysine residues of amino terminal histone tails, resulting in transcription activation. Another category of GNAT, the aminoglycoside N-acetyltransferases, confer antibiotic resistance by catalyzing the acetylation of amino groups in aminoglycoside antibiotics []. GNAT proteins can also have anabolic and catabolic functions in both prokaryotes and eukaryotes [, , , , ]. The acetyltransferase/GNAT domain forms a structurally conserved fold of 6 to 7 beta strands (B) and 4 helices (H) in the topology B1-H1-H2-B2-B3-B4-H3-B5-H4-B6, followed by a C-terminal strand which may be from the same monomer or contributed by another [, ]. Motifs D (B2-B3), A (B4-H3) and B (B5-H4) are collectively called the HAT core [, , ], while the N-terminal motif C (B1-H1) is less conserved. Some proteins known to contain a GNAT domain: Yeast GCN5 and Hat1, which are histone acetyltransferases (EC 2.3.1.48). Human PCAF, a histone acetyltransferase. Mammalian serotonin N-acetyltransferase (SNAT) or arylalkylamine NAT (AANAT), which acetylates serotonin into a circadian neurohormone that may participate in light-dark rhythms, and human mood and behavior. Mammalian glucosamine 6-phosphate N-acetyltransferase (GNA1) (EC 2.3.1.4). Escherichia coli rimI and rimJ, which acetylate the N-terminal alanine of ribosomal proteins S18 and S5, respectively (EC 2.3.1.128). Mycobacterium tuberculosis aminoglycoside 2'-N-acetyltransferase (aac), which acetylates the 2' hydroxyl or amino group of a broad spectrum of aminoglycoside antibiotics. Bacillus subtilis bltD and paiA, which acetylate spermine and spermidine. This entry represents the entire GNAT domain.; GO: 0008080 N-acetyltransferase activity, 0008152 metabolic process; PDB: 3T9Y_A 2R7H_B 2OZH_A 1Y9W_B 1VKC_B 2OH1_C 3R9E_B 3R9G_B 3R9F_A 3R96_A ....
Probab=99.63 E-value=1.9e-15 Score=107.01 Aligned_cols=74 Identities=31% Similarity=0.523 Sum_probs=67.0
Q ss_pred CCCCeEEEEEEEEeCC-----CCcEEEEEEEECCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEe---CHhhHHHHHhCC
Q 025840 159 NEQRTLIGMARATSDH-----AFNATIWDVLVDPSYQGQGLGKALVEKVVRALLQKDIGNISLFA---DSQVVDFYRNLG 230 (247)
Q Consensus 159 ~~~g~iVG~~~~~~~~-----~~~~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g~~~i~L~~---n~~a~~fY~k~G 230 (247)
+++|++||++.+.... ...++|..++|+|+|||+|+|+.|++++++.+++.|+..+.+.+ |..+++||+|+|
T Consensus 2 ~~~~~ivg~~~~~~~~~~~~~~~~~~i~~~~v~~~~r~~Gig~~L~~~~~~~~~~~g~~~i~~~~~~~n~~~~~~~~k~G 81 (83)
T PF00583_consen 2 EEDGQIVGFASLRPPPEPFDHGNHAYIHRLAVDPEYRGQGIGSKLLQAAEEWARKRGIKRIYLDVSPDNPAARRFYEKLG 81 (83)
T ss_dssp EETTEEEEEEEEEEEETTTTTTTEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTESEEEEEEETTGHHHHHHHHHTT
T ss_pred cCCCEEEEEEEEEECCCccccCCEEEEEEEEEcHHHhhCCCchhhhhhhhhhHHhcCccEEEEEEeCCCHHHHHHHHHcC
Confidence 3599999999886543 25799999999999999999999999999999999999999996 778999999999
Q ss_pred Ce
Q 025840 231 FE 232 (247)
Q Consensus 231 F~ 232 (247)
|+
T Consensus 82 f~ 83 (83)
T PF00583_consen 82 FE 83 (83)
T ss_dssp EE
T ss_pred CC
Confidence 96
No 4
>PRK03624 putative acetyltransferase; Provisional
Probab=99.60 E-value=2.3e-14 Score=110.57 Aligned_cols=120 Identities=21% Similarity=0.403 Sum_probs=89.2
Q ss_pred EEEecCCCCCHHHHHHHHHHcCCCCC---cHHHHHHHHhc--ceeEEEEEecccCCCCCCCCCCeEEEEEEEEeCCCCcE
Q 025840 104 IIFSSGGDVDVYELQTLCDKVGWPRR---PLSKLAAALKN--SYLVATLHSIRKSPGSEGNEQRTLIGMARATSDHAFNA 178 (247)
Q Consensus 104 i~~~~~~~~d~~~l~~l~~~~~w~~~---~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~g~iVG~~~~~~~~~~~~ 178 (247)
+.++..+..|.+++.+++....+... ....+...... ...+++. +++++||++.+..+. ...
T Consensus 3 ~~ir~~~~~d~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~------------~~~~~vG~~~~~~~~-~~~ 69 (140)
T PRK03624 3 MEIRVFRQADFEAVIALWERCDLTRPWNDPEMDIERKLNHDPSLFLVAE------------VGGEVVGTVMGGYDG-HRG 69 (140)
T ss_pred eEEEEcccccHHHHHHHHHhcCCCcchhhHHHHHHHHhcCCCceEEEEE------------cCCcEEEEEEeeccC-CCc
Confidence 56777788899999988877532211 11122322222 2223222 488999999876433 346
Q ss_pred EEEEEEECCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEe---CHhhHHHHHhCCCeecCC
Q 025840 179 TIWDVLVDPSYQGQGLGKALVEKVVRALLQKDIGNISLFA---DSQVVDFYRNLGFEPDPE 236 (247)
Q Consensus 179 ~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g~~~i~L~~---n~~a~~fY~k~GF~~~~~ 236 (247)
.+..++|+|+|||+|+|+.|++.+++.+++.|++.+.+.+ |..+++||+|+||+..+.
T Consensus 70 ~i~~i~v~p~~rg~Gig~~ll~~~~~~~~~~~~~~~~~~~~~~N~~~~~~y~k~GF~~~~~ 130 (140)
T PRK03624 70 WAYYLAVHPDFRGRGIGRALVARLEKKLIARGCPKINLQVREDNDAVLGFYEALGYEEQDR 130 (140)
T ss_pred eEEEEEECHHHhCCCHHHHHHHHHHHHHHHCCCCEEEEEEecCcHHHHHHHHHcCCccccE
Confidence 7889999999999999999999999999999999988885 788999999999998654
No 5
>PRK07922 N-acetylglutamate synthase; Validated
Probab=99.60 E-value=1.3e-14 Score=117.68 Aligned_cols=128 Identities=19% Similarity=0.195 Sum_probs=91.4
Q ss_pred EEEEecCCCCCHHHHHHHHHHcCCCCCc-HHHHHHHHhcc-eeEEEEEecccCCCCCCCCCCeEEEEEEEEeCCCCcEEE
Q 025840 103 QIIFSSGGDVDVYELQTLCDKVGWPRRP-LSKLAAALKNS-YLVATLHSIRKSPGSEGNEQRTLIGMARATSDHAFNATI 180 (247)
Q Consensus 103 ~i~~~~~~~~d~~~l~~l~~~~~w~~~~-~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~g~iVG~~~~~~~~~~~~~I 180 (247)
++.++.+...|.+++.+++....-.... .+.......+. .++++. .++|++||++.+.......+.|
T Consensus 5 ~i~iR~a~~~D~~~i~~L~~~~~~~~~~~~~~~~~~~~~~~~~~va~-----------~~~~~iiG~~~~~~~~~~~~~i 73 (169)
T PRK07922 5 AITVRRARTSDVPAIKRLVDPYAQGRILLEKNLVTLYEAVQEFWVAE-----------HLDGEVVGCGALHVMWEDLAEI 73 (169)
T ss_pred CceeecCCHhhHHHHHHHHHHHhhcCccccchHHHHHhhcCcEEEEE-----------ecCCcEEEEEEEeecCCCceEE
Confidence 3677888888999999988652111110 11111222222 222221 0389999999876555556889
Q ss_pred EEEEECCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEeCHhhHHHHHhCCCeecCCceeeeEe
Q 025840 181 WDVLVDPSYQGQGLGKALVEKVVRALLQKDIGNISLFADSQVVDFYRNLGFEPDPEGIKGMFW 243 (247)
Q Consensus 181 ~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g~~~i~L~~n~~a~~fY~k~GF~~~~~~~~~~~w 243 (247)
..++|+|+|||+|+|++|++++++.+++.|++.+.+.+. +++||+|+||+.++....+..+
T Consensus 74 ~~l~V~p~~rgkGiG~~Ll~~~~~~a~~~g~~~l~~~~~--~~~fY~k~GF~~~~~~~~~~~~ 134 (169)
T PRK07922 74 RTVAVDPAARGRGVGHAIVERLLDVARELGLSRVFVLTF--EVEFFARHGFVEIDGTPVTPEV 134 (169)
T ss_pred EEEEECHHHhCCCHHHHHHHHHHHHHHHcCCCEEEEEec--cHHHHHHCCCEECccccCChHH
Confidence 999999999999999999999999999999999988764 4789999999998765544333
No 6
>TIGR03827 GNAT_ablB putative beta-lysine N-acetyltransferase. Members of this protein family are GNAT family acetyltransferases, based on a seed alignment in which every member is associated with a lysine 2,3-aminomutase family protein, usually as the adjacent gene. This family includes AblB, the enzyme beta-lysine acetyltransferase that completes the two-step synthesis of the osmolyte (compatible solute) N-epsilon-acetyl-beta-lysine; all members of the family may have this function. Note that N-epsilon-acetyl-beta-lysine has been observed only in methanogenic archaea (e.g. Methanosarcina) but that this model, paired with TIGR03820, suggests a much broader distribution.
Probab=99.60 E-value=3.3e-14 Score=123.29 Aligned_cols=124 Identities=21% Similarity=0.281 Sum_probs=91.6
Q ss_pred EEEecCCCCCHHHHHHHHHHcC--C--CCCcHHHHHHHHhcceeEEEEEecccCCCCCCCCCCeEEEEEEEEeC-CCCcE
Q 025840 104 IIFSSGGDVDVYELQTLCDKVG--W--PRRPLSKLAAALKNSYLVATLHSIRKSPGSEGNEQRTLIGMARATSD-HAFNA 178 (247)
Q Consensus 104 i~~~~~~~~d~~~l~~l~~~~~--w--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~iVG~~~~~~~-~~~~~ 178 (247)
+.++.+...|.+++.+++.... | +....+.+...+++...+..+. ++|++||++.+..+ ....+
T Consensus 116 ~~IR~a~~~D~~~l~~L~~~v~~~~~~~~~~~~~l~~~~~~~~~~~v~~-----------~~g~iVG~~~~~~~~~~~~~ 184 (266)
T TIGR03827 116 FTLRIATEDDADAMAALYRKVFPTYPFPIHDPAYLLETMKSNVVYFGVE-----------DGGKIIALASAEMDPENGNA 184 (266)
T ss_pred eEEEECCHHHHHHHHHHHHHHhccCCCCccCHHHHHHHhcCCcEEEEEE-----------ECCEEEEEEEEecCCCCCcE
Confidence 3444555668888888887642 2 2233344444454433222221 38999999987543 34468
Q ss_pred EEEEEEECCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEe---CHhhHHHHHhCCCeecCCce
Q 025840 179 TIWDVLVDPSYQGQGLGKALVEKVVRALLQKDIGNISLFA---DSQVVDFYRNLGFEPDPEGI 238 (247)
Q Consensus 179 ~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g~~~i~L~~---n~~a~~fY~k~GF~~~~~~~ 238 (247)
+|.+++|+|+|||+|+|+.||+++++.+++.|+..+.+.+ |..++++|+|+||+..+.-.
T Consensus 185 eI~~i~V~P~yRG~GiG~~Ll~~l~~~a~~~g~~~l~~~~~~~n~~a~~ly~k~GF~~~G~l~ 247 (266)
T TIGR03827 185 EMTDFATLPEYRGKGLAKILLAAMEKEMKEKGIRTAYTIARASSYGMNITFARLGYAYGGTLV 247 (266)
T ss_pred EEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCcEEEeehhhcchhHHHHHHHcCCccccEEe
Confidence 9999999999999999999999999999999999988875 77899999999999887644
No 7
>PRK09491 rimI ribosomal-protein-alanine N-acetyltransferase; Provisional
Probab=99.59 E-value=6.6e-14 Score=110.07 Aligned_cols=121 Identities=23% Similarity=0.316 Sum_probs=87.7
Q ss_pred EEEecCCCCCHHHHHHHHHHcCCCCCcHHHHHHHHhcceeEEEEEecccCCCCCCCCCCeEEEEEEEEeCCCCcEEEEEE
Q 025840 104 IIFSSGGDVDVYELQTLCDKVGWPRRPLSKLAAALKNSYLVATLHSIRKSPGSEGNEQRTLIGMARATSDHAFNATIWDV 183 (247)
Q Consensus 104 i~~~~~~~~d~~~l~~l~~~~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~iVG~~~~~~~~~~~~~I~~l 183 (247)
+.++.....|.+.+..+...........+.+.......+....+. ++|++||++.+.... ..+.+..+
T Consensus 2 ~~iR~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~vG~~~~~~~~-~~~~~~~i 69 (146)
T PRK09491 2 NTISSLTPADLPAAYHIEQRAHAFPWSEKTFASNQGERYLNLKLT-----------VNGQMAAFAITQVVL-DEATLFNI 69 (146)
T ss_pred cchhcCChhhhHHHHHHHHhcCCCCCCHHHHHHHHhcCceEEEEE-----------ECCeEEEEEEEEeec-CceEEEEE
Confidence 346667788888888876553211112233332222333322221 389999999886433 35678899
Q ss_pred EECCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEe---CHhhHHHHHhCCCeecCC
Q 025840 184 LVDPSYQGQGLGKALVEKVVRALLQKDIGNISLFA---DSQVVDFYRNLGFEPDPE 236 (247)
Q Consensus 184 ~V~p~~Rg~GlG~~Ll~~~~~~a~~~g~~~i~L~~---n~~a~~fY~k~GF~~~~~ 236 (247)
+|+|+|||+|+|+.|++.+++.+.+.|+..+.+.+ |..+++||+|+||+..+.
T Consensus 70 ~v~~~~rg~G~g~~ll~~~~~~~~~~~~~~~~~~~~~~N~~a~~~y~k~Gf~~~~~ 125 (146)
T PRK09491 70 AVDPDYQRQGLGRALLEHLIDELEKRGVATLWLEVRASNAAAIALYESLGFNEVTI 125 (146)
T ss_pred EECHHHccCCHHHHHHHHHHHHHHHCCCcEEEEEEccCCHHHHHHHHHcCCEEeee
Confidence 99999999999999999999999999999998875 888999999999998653
No 8
>TIGR02382 wecD_rffC TDP-D-fucosamine acetyltransferase. This model represents the WecD protein (Formerly RffC) for the biosynthesis of enterobacterial common antigen (ECA), an outer leaflet, outer membrane glycolipid with a trisaccharide repeat unit. WecD is a member of the GNAT family of acetytransferases (pfam00583).
Probab=99.59 E-value=3.2e-14 Score=117.30 Aligned_cols=77 Identities=14% Similarity=0.211 Sum_probs=69.1
Q ss_pred CCCeEEEEEEEEeCCCCcEEEEEEEECCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEe---CHhhHHHHHhCCCeecCC
Q 025840 160 EQRTLIGMARATSDHAFNATIWDVLVDPSYQGQGLGKALVEKVVRALLQKDIGNISLFA---DSQVVDFYRNLGFEPDPE 236 (247)
Q Consensus 160 ~~g~iVG~~~~~~~~~~~~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g~~~i~L~~---n~~a~~fY~k~GF~~~~~ 236 (247)
++|++||++.+.......++|..++|+|+|||+|+|+.|++.+++++++.|+..|.+.+ |..|++||+|+||+.+++
T Consensus 106 ~~g~iiG~i~l~~~~~~~~~i~~l~V~p~~rGkG~G~~ll~~~~~~a~~~g~~~I~l~v~~~N~~A~~~Y~klGF~~~~~ 185 (191)
T TIGR02382 106 ASGDPRGYVTLRELNDTDARIGLLAVFPGAQSRGIGAELMQTALNWCYARGLTRLRVATQMGNTAALRLYIRSGANIEST 185 (191)
T ss_pred cCCeEEEEEEEEecCCCceEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEEeCCCCHHHHHHHHHcCCccccc
Confidence 48899999988644444678999999999999999999999999999999999999995 788999999999998875
No 9
>PRK10140 putative acetyltransferase YhhY; Provisional
Probab=99.58 E-value=1e-13 Score=110.23 Aligned_cols=126 Identities=15% Similarity=0.272 Sum_probs=91.0
Q ss_pred eEEEEecCCCCCHHHHHHHHHHcC-------CCCCcHHHHHHHHhcc---eeEEEEEecccCCCCCCCCCCeEEEEEEEE
Q 025840 102 EQIIFSSGGDVDVYELQTLCDKVG-------WPRRPLSKLAAALKNS---YLVATLHSIRKSPGSEGNEQRTLIGMARAT 171 (247)
Q Consensus 102 ~~i~~~~~~~~d~~~l~~l~~~~~-------w~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~~~~~~~g~iVG~~~~~ 171 (247)
+.+.+++.+..|.+.+.++..... .+....+.+...+... ..+++ .++|++||++.+.
T Consensus 2 ~~i~lr~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~------------~~~~~~vG~~~~~ 69 (162)
T PRK10140 2 SEIVIRHAETRDYEAIRQIHAQPEVYHNTLQVPHPSDHMWQERLADRPGIKQLVA------------CIDGDVVGHLTID 69 (162)
T ss_pred CccEEEecchhhHHHHHHHHhCcccccccccCCCcCHHHHHHHhhcCCCcEEEEE------------EECCEEEEEEEEe
Confidence 457788888889999999886521 1123344454444321 22222 2389999999886
Q ss_pred eCC----CCcEEEEEEEECCCCCCCCHHHHHHHHHHHHHHh-CCCCEEEEEe---CHhhHHHHHhCCCeecCCceee
Q 025840 172 SDH----AFNATIWDVLVDPSYQGQGLGKALVEKVVRALLQ-KDIGNISLFA---DSQVVDFYRNLGFEPDPEGIKG 240 (247)
Q Consensus 172 ~~~----~~~~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~-~g~~~i~L~~---n~~a~~fY~k~GF~~~~~~~~~ 240 (247)
... ...+.+ .++|+|+|||+|+|+.|++.+++++++ .|++.+.+.+ |.+|++||+|+||+..+.....
T Consensus 70 ~~~~~~~~~~~~~-~~~v~p~~rg~Gig~~ll~~l~~~~~~~~~~~~i~l~v~~~N~~a~~~y~k~GF~~~g~~~~~ 145 (162)
T PRK10140 70 VQQRPRRSHVADF-GICVDSRWKNRGVASALMREMIEMCDNWLRVDRIELTVFVDNAPAIKVYKKYGFEIEGTGKKY 145 (162)
T ss_pred cccccccceEEEE-EEEECHHHcCCCHHHHHHHHHHHHHHhhCCccEEEEEEEcCCHHHHHHHHHCCCEEEeecccc
Confidence 421 112333 589999999999999999999999988 6888888875 8999999999999998875443
No 10
>PF13673 Acetyltransf_10: Acetyltransferase (GNAT) domain; PDB: 2FIW_A 1BOB_A 3FNC_B 3EXN_A.
Probab=99.58 E-value=8.8e-14 Score=104.70 Aligned_cols=67 Identities=30% Similarity=0.581 Sum_probs=58.8
Q ss_pred CCCeEEEEEEEEeCCCCcEEEEEEEECCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEeCHhhHHHHHhCCC
Q 025840 160 EQRTLIGMARATSDHAFNATIWDVLVDPSYQGQGLGKALVEKVVRALLQKDIGNISLFADSQVVDFYRNLGF 231 (247)
Q Consensus 160 ~~g~iVG~~~~~~~~~~~~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g~~~i~L~~n~~a~~fY~k~GF 231 (247)
++|++||++.+. ....|..++|+|+|||+|+|++|++++++.++. |+..+.+..|..|.+||+++||
T Consensus 51 ~~~~ivG~~~~~----~~~~i~~l~v~p~~r~~Gig~~Ll~~~~~~~~~-~~~~l~~~~~~~a~~~y~~~GF 117 (117)
T PF13673_consen 51 EGGEIVGFAWLE----PDGEISHLYVLPEYRGRGIGRALLDAAEKEAKD-GIRRLTVEANERARRFYRKLGF 117 (117)
T ss_dssp ETTEEEEEEEEE----TCEEEEEEEE-GGGTTSSHHHHHHHHHHHHHTT-TCEEEEEEC-HHHHHHHHHTT-
T ss_pred ECCEEEEEEEEc----CCCeEEEEEEChhhcCCcHHHHHHHHHHHHHHc-CCcEEEEEeCHHHHHHHHhCCC
Confidence 499999999986 245699999999999999999999999999976 9999999999999999999998
No 11
>PRK07757 acetyltransferase; Provisional
Probab=99.58 E-value=7.1e-14 Score=110.53 Aligned_cols=117 Identities=21% Similarity=0.334 Sum_probs=88.3
Q ss_pred EEEecCCCCCHHHHHHHHHHc---CCCC-CcHHHHHHHHhcceeEEEEEecccCCCCCCCCCCeEEEEEEEEeCCCCcEE
Q 025840 104 IIFSSGGDVDVYELQTLCDKV---GWPR-RPLSKLAAALKNSYLVATLHSIRKSPGSEGNEQRTLIGMARATSDHAFNAT 179 (247)
Q Consensus 104 i~~~~~~~~d~~~l~~l~~~~---~w~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~iVG~~~~~~~~~~~~~ 179 (247)
+.++..+..|.+.+.++.... .+.. .+.+.+...+.. +. +.. ++|++||++.+.......++
T Consensus 2 ~~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~-i~~------------~~~~lvG~~~l~~~~~~~~~ 67 (152)
T PRK07757 2 MEIRKARLSDVKAIHALINVYAKKGLMLPRSLDELYENIRD-FY-VAE------------EEGEIVGCCALHILWEDLAE 67 (152)
T ss_pred ceEeeCCcccHHHHHHHHHHHHhcCCccCCCHHHHHhccCc-EE-EEE------------ECCEEEEEEEEEeccCCceE
Confidence 456777788888888887652 2221 233444433322 22 222 38999999998776666789
Q ss_pred EEEEEECCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEeCHhhHHHHHhCCCeecCC
Q 025840 180 IWDVLVDPSYQGQGLGKALVEKVVRALLQKDIGNISLFADSQVVDFYRNLGFEPDPE 236 (247)
Q Consensus 180 I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g~~~i~L~~n~~a~~fY~k~GF~~~~~ 236 (247)
|..++|+|+|||+|+|++|+..+++.+.+.|+..+.+.+. +.+||+|+||+..+.
T Consensus 68 i~~v~V~p~~rg~Glg~~Ll~~l~~~a~~~g~~~i~~~~~--~~~~Y~k~GF~~~~~ 122 (152)
T PRK07757 68 IRSLAVSEDYRGQGIGRMLVEACLEEARELGVKRVFALTY--QPEFFEKLGFREVDK 122 (152)
T ss_pred EEEEEECHHHcCCCHHHHHHHHHHHHHHhCCCCeEEEEeC--cHHHHHHCCCEEccc
Confidence 9999999999999999999999999999999988877653 468999999999876
No 12
>PF13508 Acetyltransf_7: Acetyltransferase (GNAT) domain; PDB: 3EY5_A 3FRM_B 3D8P_B 3GY9_A 3GYA_A 3S6F_A 2Q7B_A 1CM0_B 1XEB_B 1Y7R_A ....
Probab=99.57 E-value=1.6e-14 Score=102.15 Aligned_cols=70 Identities=30% Similarity=0.577 Sum_probs=62.1
Q ss_pred CCCeEEEEEEEEeCCCCcEEEEEEEECCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEeCHhhHHHHHhCCCee
Q 025840 160 EQRTLIGMARATSDHAFNATIWDVLVDPSYQGQGLGKALVEKVVRALLQKDIGNISLFADSQVVDFYRNLGFEP 233 (247)
Q Consensus 160 ~~g~iVG~~~~~~~~~~~~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g~~~i~L~~n~~a~~fY~k~GF~~ 233 (247)
+++++||++.+..... ..+|..++|+|+|||+|+|+.|++.+.+.+. ...+++.+++.+..||+++||++
T Consensus 10 ~~~~ivG~~~~~~~~~-~~~i~~~~v~~~~rg~Gig~~ll~~~~~~~~---~~~i~l~~~~~~~~fY~~~GF~~ 79 (79)
T PF13508_consen 10 DDGEIVGFIRLWPNED-FAYIGYLAVDPEYRGKGIGSKLLNYLLEKAK---SKKIFLFTNPAAIKFYEKLGFEE 79 (79)
T ss_dssp ETTEEEEEEEEEETTT-EEEEEEEEE-GGGTTSSHHHHHHHHHHHHHT---CSEEEEEEEHHHHHHHHHTTEEE
T ss_pred ECCEEEEEEEEEEcCC-EEEEEEEEECHHHcCCCHHHHHHHHHHHHcC---CCcEEEEEcHHHHHHHHHCcCCC
Confidence 5999999999977655 8899999999999999999999999998883 35688889999999999999985
No 13
>KOG3139 consensus N-acetyltransferase [General function prediction only]
Probab=99.57 E-value=6e-14 Score=110.07 Aligned_cols=73 Identities=30% Similarity=0.495 Sum_probs=65.9
Q ss_pred EEEEEEEEeCCCC---cEEEEEEEECCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEe---CHhhHHHHHhCCCeecCC
Q 025840 164 LIGMARATSDHAF---NATIWDVLVDPSYQGQGLGKALVEKVVRALLQKDIGNISLFA---DSQVVDFYRNLGFEPDPE 236 (247)
Q Consensus 164 iVG~~~~~~~~~~---~~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g~~~i~L~~---n~~a~~fY~k~GF~~~~~ 236 (247)
.||.+.+..+... .++|..++|+++|||+|||++|++.+++.++.+|+..|.|+| |.+|.+||+++||+..+.
T Consensus 68 ~VGai~ck~~~~r~~~rgyi~mLaV~~e~Rg~GIg~aLvr~aId~m~~~g~~eVvLeTe~~n~~A~~LY~sLGF~r~~r 146 (165)
T KOG3139|consen 68 TVGAIVCKLDTHRNTLRGYIAMLAVDSEYRGQGIGKALVRKAIDAMRSRGYSEVVLETEVTNLSALRLYESLGFKRDKR 146 (165)
T ss_pred eEEEEEEeccccCCcceEEEEEEEechhhccccHHHHHHHHHHHHHHHCCCcEEEEeccccchHHHHHHHhcCceEecc
Confidence 6999888655333 499999999999999999999999999999999999999996 889999999999999753
No 14
>PF13527 Acetyltransf_9: Acetyltransferase (GNAT) domain; PDB: 3SXN_C 2I00_D 1M4D_B 1M44_A 1M4G_B 1M4I_A 2OZG_A 2HV2_F 3N7Z_A 3RYO_B ....
Probab=99.57 E-value=4.6e-14 Score=108.08 Aligned_cols=115 Identities=23% Similarity=0.324 Sum_probs=85.4
Q ss_pred EecCCCCCHHHHHHHHHHcCCCCCcHH----HHHHHHhcceeEEEEEecccCCCCCCCCCCeEEEEEEEEeC-----CC-
Q 025840 106 FSSGGDVDVYELQTLCDKVGWPRRPLS----KLAAALKNSYLVATLHSIRKSPGSEGNEQRTLIGMARATSD-----HA- 175 (247)
Q Consensus 106 ~~~~~~~d~~~l~~l~~~~~w~~~~~~----~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~iVG~~~~~~~-----~~- 175 (247)
+|..+..|.+++.+++........... ......+....+++. ++|+|||++.+... +.
T Consensus 2 iR~~~~~d~~~i~~l~~~~F~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~ivg~~~~~~~~~~~~g~~ 69 (127)
T PF13527_consen 2 IRPLTESDFEQIIELFNEAFGDSESPPEIWEYFRNLYGPGRCVVAE------------DDGKIVGHVGLIPRRLSVGGKK 69 (127)
T ss_dssp EEEE-GGGHHHHHHHHHHHTTT-CHHHHHHHHHHHHHHTTEEEEEE------------ETTEEEEEEEEEEEEEEETTEE
T ss_pred ceECCHHHHHHHHHHHHHHCCCCCCchhhhhhhhcccCcCcEEEEE------------ECCEEEEEEEEEEEEEEECCEE
Confidence 456678899999999988665554442 334455556655554 49999999987432 22
Q ss_pred -CcEEEEEEEECCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEeCHhhHHHHHhCCCeec
Q 025840 176 -FNATIWDVLVDPSYQGQGLGKALVEKVVRALLQKDIGNISLFADSQVVDFYRNLGFEPD 234 (247)
Q Consensus 176 -~~~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g~~~i~L~~n~~a~~fY~k~GF~~~ 234 (247)
..++|..++|+|+|||+|+|++|++++++.++++|+..+.+.+ ....||+|+||+.+
T Consensus 70 ~~~~~i~~v~v~p~~R~~Gl~~~L~~~~~~~~~~~g~~~~~l~~--~~~~~Y~~~G~~~~ 127 (127)
T PF13527_consen 70 FKAAYIGDVAVDPEYRGRGLGRQLMRALLERARERGVPFIFLFP--SSPPFYRRFGFEYA 127 (127)
T ss_dssp EEEEEEEEEEE-GGGTTSSHHHHHHHHHHHHHHHTT-SEEEEE---SSHHHHHHTTEEEE
T ss_pred EEEEEEEEEEECHHHcCCCHHHHHHHHHHHHHHhCCCCEEEEec--CChhhhhcCCCEEC
Confidence 2489999999999999999999999999999999999888876 33699999999863
No 15
>TIGR01575 rimI ribosomal-protein-alanine acetyltransferase. Members of this model belong to the GCN5-related N-acetyltransferase (GNAT) superfamily. This model covers prokarotes and the archaea. The seed contains a characterized accession for Gram negative E. coli. An untraceable characterized accession (PIR|S66013) for Gram positive B. subtilis scores well (205.0) in the full alignment. Characterized members are lacking in the archaea. Noise cutoff (72.4) was set to exclude M. loti paralog of rimI. Trusted cutoff (80.0) was set at next highest scoring member in the mini-database.
Probab=99.56 E-value=1.7e-13 Score=104.59 Aligned_cols=113 Identities=20% Similarity=0.244 Sum_probs=83.3
Q ss_pred HHHHHHHHHHcCCCCCcHHHHHHHHhcce-eEEEEEecccCCCCCCCCCCeEEEEEEEEeCCCCcEEEEEEEECCCCCCC
Q 025840 114 VYELQTLCDKVGWPRRPLSKLAAALKNSY-LVATLHSIRKSPGSEGNEQRTLIGMARATSDHAFNATIWDVLVDPSYQGQ 192 (247)
Q Consensus 114 ~~~l~~l~~~~~w~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~g~iVG~~~~~~~~~~~~~I~~l~V~p~~Rg~ 192 (247)
.+++.++.........+.+.+...+.... .+... .++|++||++.+.... ...+|..++|+|+|||+
T Consensus 2 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~vg~~~~~~~~-~~~~i~~~~v~~~~rg~ 69 (131)
T TIGR01575 2 LKAVLEIEAAAFAFPWTEAQFAEELANYHLCYLLA-----------RIGGKVVGYAGVQIVL-DEAHILNIAVKPEYQGQ 69 (131)
T ss_pred HHHHHHHHHhhCCCCCCHHHHHHHhcCCCceEEEE-----------ecCCeEEEEEEEEecC-CCeEEEEEEECHHHcCC
Confidence 45556665553332334455555544332 22222 1489999999986543 35688999999999999
Q ss_pred CHHHHHHHHHHHHHHhCCCCEEEEEe---CHhhHHHHHhCCCeecCCce
Q 025840 193 GLGKALVEKVVRALLQKDIGNISLFA---DSQVVDFYRNLGFEPDPEGI 238 (247)
Q Consensus 193 GlG~~Ll~~~~~~a~~~g~~~i~L~~---n~~a~~fY~k~GF~~~~~~~ 238 (247)
|+|++|++.+++.+.+.|...+.+.+ |..+++||+|+||+.++...
T Consensus 70 G~g~~ll~~~~~~~~~~~~~~i~~~~~~~n~~~~~~y~~~Gf~~~~~~~ 118 (131)
T TIGR01575 70 GIGRALLRELIDEAKGRGVNEIFLEVRVSNIAAQALYKKLGFNEIAIRR 118 (131)
T ss_pred CHHHHHHHHHHHHHHHcCCCeEEEEEecccHHHHHHHHHcCCCcccccc
Confidence 99999999999999999999998874 78899999999999987643
No 16
>TIGR03103 trio_acet_GNAT GNAT-family acetyltransferase TIGR03103. Members of this protein family belong to the GNAT family of acetyltransferases. Each is part of a conserved three-gene cassette sparsely distributed across at least twenty different species known so far, including alpha, beta, and gamma Proteobacteria, Mycobacterium, and Prosthecochloris, which is a member of the Chlorobi. The other two members of the cassette are a probable protease and an asparagine synthetase family protein.
Probab=99.56 E-value=1.7e-13 Score=129.91 Aligned_cols=117 Identities=21% Similarity=0.362 Sum_probs=88.4
Q ss_pred CCCCHHHHHHHHHHcCCCCCcHHHHHHHHhc--ceeEEEEEecccCCCCCCCCCCeEEEEEEEEe------CCCCcEEEE
Q 025840 110 GDVDVYELQTLCDKVGWPRRPLSKLAAALKN--SYLVATLHSIRKSPGSEGNEQRTLIGMARATS------DHAFNATIW 181 (247)
Q Consensus 110 ~~~d~~~l~~l~~~~~w~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~g~iVG~~~~~~------~~~~~~~I~ 181 (247)
...|++.+.+++...+|.....+.+...... ...+++.. .++|++||++.... +....++|.
T Consensus 90 ~~~D~~~I~~L~~~~~~~p~~~~~~~~~~~~~~~~~~vA~~----------~~~g~IVG~~~~~~~~~~~~d~~~~~~i~ 159 (547)
T TIGR03103 90 GPADVDAINRLYAARGMVPVRVDFVLDHRHSRAITYLVAED----------EASGAIIGTVMGVDHRKAFNDPEHGSSLW 159 (547)
T ss_pred ChhHHHHHHHHHHhcCCCCCCHHHHHHHhcCCCceEEEEEE----------CCCCeEEEEEEEEeccccccCCCCCeEEE
Confidence 3568999999999877655444444333322 22232221 13699999997532 222347899
Q ss_pred EEEECCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEe---CHhhHHHHHhCCCeecCC
Q 025840 182 DVLVDPSYQGQGLGKALVEKVVRALLQKDIGNISLFA---DSQVVDFYRNLGFEPDPE 236 (247)
Q Consensus 182 ~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g~~~i~L~~---n~~a~~fY~k~GF~~~~~ 236 (247)
.|+|+|+|||+|+|++||+++++++++.|+..+.|.+ |..|++||+|+||+.++.
T Consensus 160 ~l~V~P~~Rg~GIG~~Ll~~l~e~a~~~G~~~i~L~V~~~N~~Ai~fY~klGf~~~~~ 217 (547)
T TIGR03103 160 CLAVDPQAAHPGVGEALVRALAEHFQSRGCAYMDLSVMHDNEQAIALYEKLGFRRIPV 217 (547)
T ss_pred EEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEEcCCCHHHHHHHHHCCCEEeeE
Confidence 9999999999999999999999999999999999885 788999999999998754
No 17
>PRK10314 putative acyltransferase; Provisional
Probab=99.55 E-value=3.4e-14 Score=113.35 Aligned_cols=78 Identities=23% Similarity=0.373 Sum_probs=68.8
Q ss_pred CCCeEEEEEEEEeCCC--CcEEEEEEEECCCCCCCCHHHHHHHHHHHHHHhC-CCCEEEEEeCHhhHHHHHhCCCeecCC
Q 025840 160 EQRTLIGMARATSDHA--FNATIWDVLVDPSYQGQGLGKALVEKVVRALLQK-DIGNISLFADSQVVDFYRNLGFEPDPE 236 (247)
Q Consensus 160 ~~g~iVG~~~~~~~~~--~~~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~-g~~~i~L~~n~~a~~fY~k~GF~~~~~ 236 (247)
+++++||++++..... ..++|..|+|+|+|||+|+|++||+++++.+++. +...+.|.++..+.+||+|+||+.+++
T Consensus 55 ~~~~~vg~~r~~~~~~~~~~~~i~rv~V~~~~rG~GiG~~Lm~~~~~~~~~~~~~~~i~L~a~~~a~~fY~k~GF~~~g~ 134 (153)
T PRK10314 55 KNDELVAYARILKSDDDLEPVVIGRVIVSEALRGEKVGQQLMSKTLESCTRHWPDKPVYLGAQAHLQNFYQSFGFIPVTE 134 (153)
T ss_pred ECCEEEEEEEEecCCCCCCCEEEEEEEECHHHhCCCHHHHHHHHHHHHHHHHCCCCcEEEehHHHHHHHHHHCCCEECCC
Confidence 3899999999876432 3579999999999999999999999999999875 778899999999999999999999886
Q ss_pred c
Q 025840 237 G 237 (247)
Q Consensus 237 ~ 237 (247)
.
T Consensus 135 ~ 135 (153)
T PRK10314 135 V 135 (153)
T ss_pred c
Confidence 3
No 18
>PRK10975 TDP-fucosamine acetyltransferase; Provisional
Probab=99.55 E-value=1.8e-13 Score=113.09 Aligned_cols=79 Identities=15% Similarity=0.235 Sum_probs=69.9
Q ss_pred CCCeEEEEEEEEeCCCCcEEEEEEEECCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEe---CHhhHHHHHhCCCeecCC
Q 025840 160 EQRTLIGMARATSDHAFNATIWDVLVDPSYQGQGLGKALVEKVVRALLQKDIGNISLFA---DSQVVDFYRNLGFEPDPE 236 (247)
Q Consensus 160 ~~g~iVG~~~~~~~~~~~~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g~~~i~L~~---n~~a~~fY~k~GF~~~~~ 236 (247)
++|++||++.+.......++|..++|+|+|||+|+|++|++.+++++++.|++.+.+.+ |..+++||+|+||+.++.
T Consensus 109 ~~g~~vG~~~l~~~~~~~~~i~~~~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~yek~Gf~~~~~ 188 (194)
T PRK10975 109 ASGQIQGFVTLRELNDTDARIGLLAVFPGAQGRGIGARLMQAALNWCQARGLTRLRVATQMGNLAALRLYIRSGANIEST 188 (194)
T ss_pred CCCCEEEEEEEEecCCCceEEEEEEEChhhcCCCHHHHHHHHHHHHHHHcCCCEEEEEeCCCcHHHHHHHHHCCCeEeEE
Confidence 47899999988654444688999999999999999999999999999999999999885 788999999999999876
Q ss_pred ce
Q 025840 237 GI 238 (247)
Q Consensus 237 ~~ 238 (247)
..
T Consensus 189 ~~ 190 (194)
T PRK10975 189 AY 190 (194)
T ss_pred Ee
Confidence 43
No 19
>PLN02706 glucosamine 6-phosphate N-acetyltransferase
Probab=99.55 E-value=1.8e-13 Score=107.94 Aligned_cols=77 Identities=21% Similarity=0.296 Sum_probs=66.0
Q ss_pred CCeEEEEEEEEeC------CCCcEEEEEEEECCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEeCHhhHHHHHhCCCeec
Q 025840 161 QRTLIGMARATSD------HAFNATIWDVLVDPSYQGQGLGKALVEKVVRALLQKDIGNISLFADSQVVDFYRNLGFEPD 234 (247)
Q Consensus 161 ~g~iVG~~~~~~~------~~~~~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g~~~i~L~~n~~a~~fY~k~GF~~~ 234 (247)
+|++||++.+... ....++|..++|+|+|||+|+|+.|++.++++|++.|+..+.+.+.+...+||+|+||+.+
T Consensus 63 ~~~ivG~~~~~~~~~~~~~~~~~~~i~~i~V~~~~rg~GiG~~ll~~~~~~a~~~g~~~i~l~~~~~N~~~y~k~GF~~~ 142 (150)
T PLN02706 63 SGRIIATGSVFVERKFIRNCGKVGHIEDVVVDSAARGKGLGKKIIEALTEHARSAGCYKVILDCSEENKAFYEKCGYVRK 142 (150)
T ss_pred CCcEEEEEEEEEEeecccCCCcEEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEEeccccHHHHHHCcCEEe
Confidence 6899999877321 1234688889999999999999999999999999999999999986666789999999998
Q ss_pred CCc
Q 025840 235 PEG 237 (247)
Q Consensus 235 ~~~ 237 (247)
+.+
T Consensus 143 g~~ 145 (150)
T PLN02706 143 EIQ 145 (150)
T ss_pred hhh
Confidence 754
No 20
>COG1246 ArgA N-acetylglutamate synthase and related acetyltransferases [Amino acid transport and metabolism]
Probab=99.54 E-value=1.2e-13 Score=108.32 Aligned_cols=116 Identities=16% Similarity=0.292 Sum_probs=95.7
Q ss_pred EecCCCCCHHHHHHHHHHcCCCC----CcHHHHHHHHhcceeEEEEEecccCCCCCCCCCCeEEEEEEEE-eCCCCcEEE
Q 025840 106 FSSGGDVDVYELQTLCDKVGWPR----RPLSKLAAALKNSYLVATLHSIRKSPGSEGNEQRTLIGMARAT-SDHAFNATI 180 (247)
Q Consensus 106 ~~~~~~~d~~~l~~l~~~~~w~~----~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~iVG~~~~~-~~~~~~~~I 180 (247)
+|.+...|+..+.++.....-.. ++.+.+...+++.+.+ . .+|.+|||+.+. ......+++
T Consensus 3 iR~A~~~Di~~I~~Li~~~~~~gil~~rs~~~le~~i~dF~i~-E-------------~~g~viGC~aL~~~~~~~~gE~ 68 (153)
T COG1246 3 IRKARISDIPAILELIRPLELQGILLRRSREQLEEEIDDFTII-E-------------RDGKVIGCAALHPVLEEDLGEL 68 (153)
T ss_pred eeeccccchHHHHHHHHHHhhccccchhhHHHHHHHHhhheee-e-------------eCCcEEEEEeecccCccCeeeE
Confidence 56677889999999888754432 4556666666654433 2 399999999998 467778999
Q ss_pred EEEEECCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEeCHhhHHHHHhCCCeecCC
Q 025840 181 WDVLVDPSYQGQGLGKALVEKVVRALLQKDIGNISLFADSQVVDFYRNLGFEPDPE 236 (247)
Q Consensus 181 ~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g~~~i~L~~n~~a~~fY~k~GF~~~~~ 236 (247)
..++|||++||+|+|..|+.+++..|++.|++.+.+.++ .+..||+++||+.++.
T Consensus 69 ~~laV~pd~r~~G~G~~Ll~~~~~~Ar~~gi~~lf~LTt-~~~~~F~~~GF~~vd~ 123 (153)
T COG1246 69 RSLAVHPDYRGSGRGERLLERLLADARELGIKELFVLTT-RSPEFFAERGFTRVDK 123 (153)
T ss_pred EEEEECHHhcCCCcHHHHHHHHHHHHHHcCCceeeeeec-ccHHHHHHcCCeECcc
Confidence 999999999999999999999999999999999999886 5679999999999875
No 21
>KOG3216 consensus Diamine acetyltransferase [Amino acid transport and metabolism]
Probab=99.53 E-value=4e-13 Score=104.45 Aligned_cols=128 Identities=15% Similarity=0.226 Sum_probs=93.9
Q ss_pred eEEEEecCCCCCHHHHHHHHHHc-CCC------CCcHHHHHH--HHhcceeEEEEEecccCCCCCCCCCCeEEEEEEEEe
Q 025840 102 EQIIFSSGGDVDVYELQTLCDKV-GWP------RRPLSKLAA--ALKNSYLVATLHSIRKSPGSEGNEQRTLIGMARATS 172 (247)
Q Consensus 102 ~~i~~~~~~~~d~~~l~~l~~~~-~w~------~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~~~~~g~iVG~~~~~~ 172 (247)
..+.++.+++.|.+.++.+.++. .+. ..+.+.+.. .+++.+.......+ ..+++.+|||+....
T Consensus 2 ~~~~IR~at~~D~~~i~rLikela~Fek~~~~v~~te~~l~~~~F~d~~~~~~~v~~i-------e~~~~~~aGf~~yf~ 74 (163)
T KOG3216|consen 2 DNIRIRLATPKDCEDILRLIKELAEFEKLEDQVEATEENLARDGFIDPPFKHWLVAAI-------ETSGEVVAGFALYFN 74 (163)
T ss_pred CceEEEecCcccHHHHHHHHHHHHHHHHhccchhhchhhhhhhhccCCCccEEEEEEE-------ecCCCceeEEeeeec
Confidence 34677788888888888888762 111 123344554 34544333222111 124889999998753
Q ss_pred C-----CCCcEEEEEEEECCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEe---CHhhHHHHHhCCCeecCC
Q 025840 173 D-----HAFNATIWDVLVDPSYQGQGLGKALVEKVVRALLQKDIGNISLFA---DSQVVDFYRNLGFEPDPE 236 (247)
Q Consensus 173 ~-----~~~~~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g~~~i~L~~---n~~a~~fY~k~GF~~~~~ 236 (247)
. +....||.+++|+|+|||+|+|+.|+..+-+.|...|+.++...+ |..|+.||++.|++...+
T Consensus 75 ~ystW~~k~~iYleDlyV~e~yR~kG~Gs~Ll~~va~~A~~~G~~rv~w~vldwN~rAi~lY~k~gaq~l~~ 146 (163)
T KOG3216|consen 75 NYSTWLGKQGIYLEDLYVREQYRGKGIGSKLLKFVAEEADKLGTPRVEWVVLDWNHRAILLYEKVGAQDLKE 146 (163)
T ss_pred ccccccccceEEEEeeEecchhcccChHHHHHHHHHHHHHHcCCCcEEEEEeccchhHHHHHHHhCccccce
Confidence 3 334589999999999999999999999999999999988876554 999999999999998865
No 22
>PRK09831 putative acyltransferase; Provisional
Probab=99.52 E-value=2e-13 Score=107.78 Aligned_cols=69 Identities=19% Similarity=0.355 Sum_probs=60.0
Q ss_pred CCCeEEEEEEEEeCCCCcEEEEEEEECCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEeCHhhHHHHHhCCCeecCCce
Q 025840 160 EQRTLIGMARATSDHAFNATIWDVLVDPSYQGQGLGKALVEKVVRALLQKDIGNISLFADSQVVDFYRNLGFEPDPEGI 238 (247)
Q Consensus 160 ~~g~iVG~~~~~~~~~~~~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g~~~i~L~~n~~a~~fY~k~GF~~~~~~~ 238 (247)
++|++||++.+.. .+|..++|+|+|||+|+|++|++++++.+.+ +.+.++..+++||+|+||+.++...
T Consensus 60 ~~~~iiG~~~~~~-----~~i~~~~v~p~~~g~GiG~~Ll~~~~~~~~~-----l~v~~~~~a~~~Y~k~Gf~~~g~~~ 128 (147)
T PRK09831 60 INAQPVGFITCIE-----HYIDMLFVDPEYTRRGVASALLKPLIKSESE-----LTVDASITAKPFFERYGFQTVKQQR 128 (147)
T ss_pred ECCEEEEEEEehh-----ceeeeEEECHHHcCCCHHHHHHHHHHHHhhh-----eEeecchhhHHHHHHCCCEEeeccc
Confidence 4899999988742 4788999999999999999999999998865 5667788899999999999998743
No 23
>TIGR02406 ectoine_EctA L-2,4-diaminobutyric acid acetyltransferase. This enzyme family is the EctA of ectoine biosynthesis. Ectoine is a compatible solute, analagous to trehalose, betaines, etc., found often in halotolerant organisms. EctA is L-2,4-diaminobutyric acid acetyltransferase, also called DABA acetyltransferase.
Probab=99.52 E-value=4.5e-13 Score=107.23 Aligned_cols=118 Identities=14% Similarity=0.202 Sum_probs=83.8
Q ss_pred ecCCCCCHHHHHHHHHHcCCCC-CcHH---HHHHHHhcceeEEEEEecccCCCCCCCCCCeEEEEEEEEe--CCCCcEEE
Q 025840 107 SSGGDVDVYELQTLCDKVGWPR-RPLS---KLAAALKNSYLVATLHSIRKSPGSEGNEQRTLIGMARATS--DHAFNATI 180 (247)
Q Consensus 107 ~~~~~~d~~~l~~l~~~~~w~~-~~~~---~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~iVG~~~~~~--~~~~~~~I 180 (247)
+.++..|+.++.++........ .... .+..... ...++.. .++|++||++.+.. ......++
T Consensus 2 R~~~~~D~~~i~~L~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~-----------~~~~~ivG~~~~~~~~~~~~~~~i 69 (157)
T TIGR02406 2 RPPRIEDGAGIWELVKDCPPLDLNSSYAYLLLCTDFA-DTSIVAE-----------SEGGEIVGFVSGYLRPDRPDVLFV 69 (157)
T ss_pred CCCccccHHHHHHHHHhCCCCCcccceehhhhhhhcC-CcEEEEE-----------cCCCeEEEEEEEEecCCCCCeEEE
Confidence 4456778888888887753221 1111 1111111 2222221 13789999987542 23345789
Q ss_pred EEEEECCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEe---CHhhHHHHHhCCCeecCC
Q 025840 181 WDVLVDPSYQGQGLGKALVEKVVRALLQKDIGNISLFA---DSQVVDFYRNLGFEPDPE 236 (247)
Q Consensus 181 ~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g~~~i~L~~---n~~a~~fY~k~GF~~~~~ 236 (247)
..++|+|+|||+|+|++|++.+++.+++.++..+.+.+ |.+|++||+|+||+....
T Consensus 70 ~~l~V~p~~rg~GiG~~L~~~l~~~a~~~~~~~i~~~v~~~N~~a~~ly~k~G~~~~~~ 128 (157)
T TIGR02406 70 WQVAVDPRARGKGLARRLLEALLERVACERVRHLETTITPDNQASRALFKALARRRGVH 128 (157)
T ss_pred EEEEEChHhccCcHHHHHHHHHHHHHHhCCCCEEEEEEcCCCHHHHHHHHHhCcccCCC
Confidence 99999999999999999999999999999998888885 889999999999987543
No 24
>PHA00673 acetyltransferase domain containing protein
Probab=99.49 E-value=6.3e-13 Score=105.33 Aligned_cols=115 Identities=13% Similarity=0.168 Sum_probs=85.5
Q ss_pred CCCCCHHHHHHHHHHc--CCCCCc-------HHHHHHHHhc--ceeEEEEEecccCCCCCCCCCCeEEEEEEEEeC----
Q 025840 109 GGDVDVYELQTLCDKV--GWPRRP-------LSKLAAALKN--SYLVATLHSIRKSPGSEGNEQRTLIGMARATSD---- 173 (247)
Q Consensus 109 ~~~~d~~~l~~l~~~~--~w~~~~-------~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~g~iVG~~~~~~~---- 173 (247)
++..|++.|.+|+.+. ++.+.. ...+.....+ ...+++. ++|+|||++.+...
T Consensus 12 A~~~D~paI~~LLadd~l~~~r~d~~~~~~y~~af~ai~~dp~~~llVa~------------~~g~vVG~~~l~~~p~l~ 79 (154)
T PHA00673 12 AELADAPTFASLCAEYAHESANADLAGRAPDHHAYAGMEAAGVAHFLGVF------------RGEELVGFACLLVTPVPH 79 (154)
T ss_pred ccHhhHHHHHHHHHhcccccccccccccchhHHHHHHHHhCCCcEEEEEE------------ECCEEEEEEEEEEecCCc
Confidence 4577899999998763 333211 1123333333 2333332 48999999887532
Q ss_pred --CCCcEEEEEEEECCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEe--CHhhHHHHHhCCCeecC
Q 025840 174 --HAFNATIWDVLVDPSYQGQGLGKALVEKVVRALLQKDIGNISLFA--DSQVVDFYRNLGFEPDP 235 (247)
Q Consensus 174 --~~~~~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g~~~i~L~~--n~~a~~fY~k~GF~~~~ 235 (247)
+...+.|.+|+|+|++||+|||++|++.++++++++|+..+.+.+ +...+.||.++|++...
T Consensus 80 ~~~~~~~~Ie~l~V~~~~RGqGIG~~Ll~~A~~~Ar~~Gc~~lyis~~p~~~tv~fy~~~g~~~~~ 145 (154)
T PHA00673 80 FKGQLIGTTESIFVAAAHRPGGAGMALLRATEALARDLGATGLYVSGPTEGRLVQLLPAAGYRETN 145 (154)
T ss_pred cCCccEEEEEEEEEChhccCCCHHHHHHHHHHHHHHHCCCCEEEEecCCCccchHHHHhCCchhhc
Confidence 223578999999999999999999999999999999999999996 45589999999999765
No 25
>TIGR03448 mycothiol_MshD mycothiol biosynthesis acetyltransferase. Members of this family are MshD, the acetyltransferase that catalyzes the final step of mycothiol biosynthesis in various members of the Actinomyctes, Mycothiol replaces glutathione in these species.
Probab=99.49 E-value=6.7e-13 Score=116.05 Aligned_cols=76 Identities=26% Similarity=0.415 Sum_probs=65.1
Q ss_pred CCeEEEEEEEEeCC--CCcEEEEEEEECCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEe---CHhhHHHHHhCCCeecC
Q 025840 161 QRTLIGMARATSDH--AFNATIWDVLVDPSYQGQGLGKALVEKVVRALLQKDIGNISLFA---DSQVVDFYRNLGFEPDP 235 (247)
Q Consensus 161 ~g~iVG~~~~~~~~--~~~~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g~~~i~L~~---n~~a~~fY~k~GF~~~~ 235 (247)
+|++||++.+.... ...++|..++|+|+|||+|||++|+.++++++++.|+..+.+.+ |..|++||+|+||+..+
T Consensus 208 ~~~~vG~~~~~~~~~~~~~~~i~~~~V~p~~rg~GiG~~ll~~~~~~~~~~g~~~v~l~v~~~N~~a~~~y~k~GF~~~~ 287 (292)
T TIGR03448 208 PGELLGFHWTKVHPDEPALGEVYVVGVDPAAQGRGLGDALTLIGLHHLAARGLPAVMLYVEADNEAAVRTYEKLGFTVAE 287 (292)
T ss_pred CCcEEEEEEEEecCCCCceeEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEEeCCCHHHHHHHHHcCCEEcc
Confidence 68999998654432 23467878999999999999999999999999999999888875 78899999999999876
Q ss_pred C
Q 025840 236 E 236 (247)
Q Consensus 236 ~ 236 (247)
.
T Consensus 288 ~ 288 (292)
T TIGR03448 288 V 288 (292)
T ss_pred c
Confidence 5
No 26
>COG0456 RimI Acetyltransferases [General function prediction only]
Probab=99.47 E-value=1.2e-12 Score=105.55 Aligned_cols=75 Identities=28% Similarity=0.602 Sum_probs=65.5
Q ss_pred eEEEEEEEE-eCCC----CcEEEEEEEECCCCCCCCHHHHHHHHHHHHHHhCCC-CEEEEEe---CHhhHHHHHhCCCee
Q 025840 163 TLIGMARAT-SDHA----FNATIWDVLVDPSYQGQGLGKALVEKVVRALLQKDI-GNISLFA---DSQVVDFYRNLGFEP 233 (247)
Q Consensus 163 ~iVG~~~~~-~~~~----~~~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g~-~~i~L~~---n~~a~~fY~k~GF~~ 233 (247)
+++|++... ..+. ..++|..++|+|+|||+|||++|++++++.+.+.+. ..+.|.+ |..|++||+|+||+.
T Consensus 72 ~~~G~~~~~~~~~~~~~~~~~~i~~iaV~p~~r~~Gig~~Ll~~~~~~~~~~~~~~~~~L~V~~~N~~Ai~lY~~~GF~~ 151 (177)
T COG0456 72 KVVGFLLVRVVDGRPSADHEGHIYNLAVDPEYRGRGIGRALLDEALERLRERGLADKIVLEVRESNEAAIGLYRKLGFEV 151 (177)
T ss_pred ceeEEEEEEEecCCccccCccEEEEEEEChHhhcCCHHHHHHHHHHHHHHhcCCCceEEEEEecCChHHHHHHHHcCCEE
Confidence 699999885 3332 268999999999999999999999999999999986 7899986 889999999999998
Q ss_pred cCCc
Q 025840 234 DPEG 237 (247)
Q Consensus 234 ~~~~ 237 (247)
.+..
T Consensus 152 ~~~~ 155 (177)
T COG0456 152 VKIR 155 (177)
T ss_pred Eeee
Confidence 7643
No 27
>PRK12308 bifunctional argininosuccinate lyase/N-acetylglutamate synthase; Provisional
Probab=99.43 E-value=1.5e-12 Score=125.12 Aligned_cols=119 Identities=19% Similarity=0.264 Sum_probs=87.2
Q ss_pred EEEecCCCCCHHHHHHHHHHcC---CC-CCcHHHHHHHHhcceeEEEEEecccCCCCCCCCCCeEEEEEEEEeCCCCcEE
Q 025840 104 IIFSSGGDVDVYELQTLCDKVG---WP-RRPLSKLAAALKNSYLVATLHSIRKSPGSEGNEQRTLIGMARATSDHAFNAT 179 (247)
Q Consensus 104 i~~~~~~~~d~~~l~~l~~~~~---w~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~iVG~~~~~~~~~~~~~ 179 (247)
+.++.....|.+++.+++.... +. ....+.+.... ..+++. +++|++|||+.+.......++
T Consensus 464 m~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~~~l~~~~--~~~~Va------------~~~g~IVG~~~l~~~~~~~~~ 529 (614)
T PRK12308 464 VKVRPARLTDIDAIEGMVAYWAGLGENLPRSRNELVRDI--GSFAVA------------EHHGEVTGCASLYIYDSGLAE 529 (614)
T ss_pred CEEEECCHHHHHHHHHHHHHHHhhhcccccCHHHHhccc--CcEEEE------------EECCEEEEEEEEEEcCCCeEE
Confidence 5566677778888888776421 11 11222222211 122222 248999999988765555688
Q ss_pred EEEEEECCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEeCHhhHHHHHhCCCeecCCce
Q 025840 180 IWDVLVDPSYQGQGLGKALVEKVVRALLQKDIGNISLFADSQVVDFYRNLGFEPDPEGI 238 (247)
Q Consensus 180 I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g~~~i~L~~n~~a~~fY~k~GF~~~~~~~ 238 (247)
|..++|+|+|||+|||+.|++++++.+++.|++.+.+.++ +.+||+|+||+.++...
T Consensus 530 I~~i~V~P~~rGkGIGk~Ll~~l~~~ak~~g~~~i~l~~~--a~~FYek~GF~~~~~~~ 586 (614)
T PRK12308 530 IRSLGVEAGWQVQGQGSALVQYLVEKARQMAIKKVFVLTR--VPEFFMKQGFSPTSKSL 586 (614)
T ss_pred EEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEeeC--cHHHHHHCCCEECCccc
Confidence 9999999999999999999999999999999999988764 57999999999988643
No 28
>TIGR01890 N-Ac-Glu-synth amino-acid N-acetyltransferase. This model represents a clade of amino-acid N-acetyltransferases acting mainly on glutamate in the first step of the "acetylated" ornithine biosynthesis pathway. For this reason it is also called N-acetylglutamate synthase. The enzyme may also act on aspartate.
Probab=99.41 E-value=3e-12 Score=118.25 Aligned_cols=118 Identities=17% Similarity=0.237 Sum_probs=88.3
Q ss_pred EEecCCCCCHHHHHHHHHH---cCCCC-CcHHHHHHHHhcceeEEEEEecccCCCCCCCCCCeEEEEEEEEeC-CCCcEE
Q 025840 105 IFSSGGDVDVYELQTLCDK---VGWPR-RPLSKLAAALKNSYLVATLHSIRKSPGSEGNEQRTLIGMARATSD-HAFNAT 179 (247)
Q Consensus 105 ~~~~~~~~d~~~l~~l~~~---~~w~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~iVG~~~~~~~-~~~~~~ 179 (247)
.++.++..|++++.++... ..|.. ...+.+..... .+.++. ++|++||++.+... ....++
T Consensus 284 ~IR~at~~Dl~~I~~L~~~~~~~~~~~~~~~~~l~~~~~-~~~V~~-------------~dg~iVG~~~~~~~~~~~~~~ 349 (429)
T TIGR01890 284 SIRQATIDDIGGIAALIRPLEEQGILVRRSREYLEREIS-EFSIIE-------------HDGNIIGCAALYPYAEEDCGE 349 (429)
T ss_pred heEECCHHHHHHHHHHHHHHHHcCCchhhhHHHHHhhcC-cEEEEE-------------ECCEEEEEEEEEecCCCCeEE
Confidence 5788888899998888652 34432 22233333332 222222 38999999988754 334689
Q ss_pred EEEEEECCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEeCHhhHHHHHhCCCeecCCc
Q 025840 180 IWDVLVDPSYQGQGLGKALVEKVVRALLQKDIGNISLFADSQVVDFYRNLGFEPDPEG 237 (247)
Q Consensus 180 I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g~~~i~L~~n~~a~~fY~k~GF~~~~~~ 237 (247)
|..++|+|+|||+|+|++||+++++.++++|+..+.+.++ .+.+||+|+||+.++..
T Consensus 350 I~~l~V~p~~Rg~GiG~~Ll~~l~~~A~~~G~~~l~v~~~-~a~~fY~k~GF~~~g~~ 406 (429)
T TIGR01890 350 MACLAVSPEYQDGGRGERLLAHIEDRARQMGISRLFVLTT-RTGHWFRERGFQTASVD 406 (429)
T ss_pred EEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEeec-chHHHHHHCCCEECChh
Confidence 9999999999999999999999999999999998876653 36799999999998763
No 29
>PF13420 Acetyltransf_4: Acetyltransferase (GNAT) domain; PDB: 3DR8_A 3DR6_A 2AE6_B 2JLM_C 2J8R_A 1YVO_B 2J8M_A 2J8N_A 2BL1_A 3IWG_A ....
Probab=99.40 E-value=1.4e-11 Score=97.41 Aligned_cols=125 Identities=21% Similarity=0.401 Sum_probs=86.7
Q ss_pred EecCCCCCHHHHHHHHHHc----CCCC----CcHH---HHHHHH---hcceeEEEEEecccCCCCCCCCCCeEEEEEEEE
Q 025840 106 FSSGGDVDVYELQTLCDKV----GWPR----RPLS---KLAAAL---KNSYLVATLHSIRKSPGSEGNEQRTLIGMARAT 171 (247)
Q Consensus 106 ~~~~~~~d~~~l~~l~~~~----~w~~----~~~~---~~~~~~---~~~~~v~~~~~~~~~~~~~~~~~g~iVG~~~~~ 171 (247)
+|+++..|.+.+..++.+. .+.. .+.+ .+.... .+...+.+.. ++|++||++.+.
T Consensus 1 IR~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-----------~~g~iiG~~~~~ 69 (155)
T PF13420_consen 1 IRPATEEDLEEILKLYNEPRHEYFFTFEYPEDSEESFERWIESIIDSSKQRLFLVAE-----------EDGKIIGYVSLR 69 (155)
T ss_dssp EEE--GGGHHHHHHHHHHHHHHTSSSSCSSHS-HHHHHHHHHHHHHHHTTEEEEEEE-----------CTTEEEEEEEEE
T ss_pred CCCCcHHHHHHHHHHHhhhhhcceeEecCCCCCHHHHHHHHHHhcccCCCcEEEEEE-----------cCCcEEEEEEEE
Confidence 3566788999988888651 2222 1222 222222 2333444431 399999999887
Q ss_pred eC-CC-CcEEEEEEEECCCCCCCCHHHHHHHHHHHHH-HhCCCCEEEEEe---CHhhHHHHHhCCCeecCCceeeeE
Q 025840 172 SD-HA-FNATIWDVLVDPSYQGQGLGKALVEKVVRAL-LQKDIGNISLFA---DSQVVDFYRNLGFEPDPEGIKGMF 242 (247)
Q Consensus 172 ~~-~~-~~~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a-~~~g~~~i~L~~---n~~a~~fY~k~GF~~~~~~~~~~~ 242 (247)
.- .. ..+.+ .+.|.|++|++|+|+.|+..+++.| .+.|++.+.+.+ |..+++||+++||+.++.....+.
T Consensus 70 ~~~~~~~~~~~-~~~v~~~~~~~gig~~l~~~l~~~af~~~~~~~i~~~v~~~N~~~i~~~~~~GF~~~g~~~~~~~ 145 (155)
T PF13420_consen 70 DIDPYNHTAEL-SIYVSPDYRGKGIGRKLLDELIEYAFKELGIHKIYLEVFSSNEKAINFYKKLGFEEEGELKDHIF 145 (155)
T ss_dssp ESSSGTTEEEE-EEEEEGGGTTSSHHHHHHHHHHHHH-HHTT-CEEEEEEETT-HHHHHHHHHTTEEEEEEEEEEEE
T ss_pred eeeccCCEEEE-eeEEChhHCCCcHHHHHHHHHHHHhhhccCeEEEEEEEecCCHHHHHHHHhCCCEEEEEEecEEE
Confidence 43 22 33555 4888899999999999999999999 889999999885 899999999999999887655443
No 30
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=99.40 E-value=1.1e-11 Score=110.18 Aligned_cols=123 Identities=18% Similarity=0.278 Sum_probs=93.3
Q ss_pred EEEecCCCCCHHHHHHHHHHcC-CC----CCcHHHHHHHHhcceeEEEEEecccCCCCCCCCCCeEEEEEEEEeCCCCcE
Q 025840 104 IIFSSGGDVDVYELQTLCDKVG-WP----RRPLSKLAAALKNSYLVATLHSIRKSPGSEGNEQRTLIGMARATSDHAFNA 178 (247)
Q Consensus 104 i~~~~~~~~d~~~l~~l~~~~~-w~----~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~iVG~~~~~~~~~~~~ 178 (247)
+.++.++..|++.+.++..... |. ..+.+.+...+.+...+++... ++ ..++.+||++.+... ....
T Consensus 187 ~~Ir~a~~~Dl~ri~~L~~~tnqfn~~~~~~s~~~i~~~l~~~~~~~~~~~-d~------~gd~givG~~~~~~~-~~~~ 258 (320)
T TIGR01686 187 LNISKNDEQNVQRVEELLGRTNQFNATYTRLNQEDVAQHMQKEEIVTVSMS-DR------FGDSGIIGIFVFEKK-EGNL 258 (320)
T ss_pred EEEEECChhhhHHHHHHHHhHHhhhccCccCCHHHHHHHhcCCCEEEEEEE-ec------CCCCceEEEEEEEec-CCcE
Confidence 5688888999999999987641 22 2345566666655432222110 00 015679999987653 4468
Q ss_pred EEEEEEECCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEe-----CHhhHHHHHhCCCeec
Q 025840 179 TIWDVLVDPSYQGQGLGKALVEKVVRALLQKDIGNISLFA-----DSQVVDFYRNLGFEPD 234 (247)
Q Consensus 179 ~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g~~~i~L~~-----n~~a~~fY~k~GF~~~ 234 (247)
+|..++|+|.+||+|+|++||+++++.+++.|++.+++.+ |..|++||+++||+.+
T Consensus 259 ~I~~l~vs~r~~grGig~~Ll~~l~~~a~~~G~~~i~l~v~~~~~N~~A~~fY~~~GF~~~ 319 (320)
T TIGR01686 259 FIDDLCMSCRALGRGVETRMLRWLFEQALDLGNHNARLYYRRTERNMPFLSFYEQIGFEDE 319 (320)
T ss_pred EEEEEEEcHhHhcCcHHHHHHHHHHHHHHHcCCCeEEEEEeeCCCchHHHHHHHHcCCccC
Confidence 8999999999999999999999999999999999999874 8899999999999865
No 31
>PF13523 Acetyltransf_8: Acetyltransferase (GNAT) domain; PDB: 2VQY_A 2BUE_A 1V0C_A 1YK3_D 2PR8_A 2QIR_A 2PRB_A 2QML_A 2PC1_A.
Probab=99.40 E-value=5.9e-12 Score=99.55 Aligned_cols=121 Identities=21% Similarity=0.345 Sum_probs=83.9
Q ss_pred EecCC-CCCHHHHHHHHHHc----CCCCCc----HHHHHHHHh---cceeEEEEEecccCCCCCCCCCCeEEEEEEEEe-
Q 025840 106 FSSGG-DVDVYELQTLCDKV----GWPRRP----LSKLAAALK---NSYLVATLHSIRKSPGSEGNEQRTLIGMARATS- 172 (247)
Q Consensus 106 ~~~~~-~~d~~~l~~l~~~~----~w~~~~----~~~~~~~~~---~~~~v~~~~~~~~~~~~~~~~~g~iVG~~~~~~- 172 (247)
+|.++ ..|++.|..+..+. .|.... .+.+...+. ....++.. .+|+++|++.+..
T Consensus 1 ~R~a~~~~Dl~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~------------~dg~~~g~~~~~~~ 68 (152)
T PF13523_consen 1 LRPATTPDDLPLILQWLNQPHVREFWDQDPSQEWVEEYPEQLEADPGHHPYVAE------------DDGEPIGYFEIYWP 68 (152)
T ss_dssp EEE---GGGHHHHHHHHTSHHHHCCH-CCCTHHHHHHHHHHHCHTTTEEEEEEE------------ETTEEEEEEEEEEG
T ss_pred CeeCccHHHHHHHHHHHHhHHHHHHccCCCCHHHHHHHHhhhcccCCceEEEEE------------ECCEEEEEEEEecc
Confidence 35566 77888888888652 333322 233333442 22333333 3999999998853
Q ss_pred -----CCCCcEEEEEEEECCCCCCCCHHHHHHHHHHHHHHhC-CCCEEEEEe---CHhhHHHHHhCCCeecCCce
Q 025840 173 -----DHAFNATIWDVLVDPSYQGQGLGKALVEKVVRALLQK-DIGNISLFA---DSQVVDFYRNLGFEPDPEGI 238 (247)
Q Consensus 173 -----~~~~~~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~-g~~~i~L~~---n~~a~~fY~k~GF~~~~~~~ 238 (247)
.......+..+.++|++||+|+|+.+++.+++.+.+. ++..+.+++ |..++++|+|+||+.+++..
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~rg~G~g~~~~~~~~~~~~~~~~~~~i~~~~~~~N~~~~~~~~k~GF~~~g~~~ 143 (152)
T PF13523_consen 69 DEDYDADDGDRGIHRLIVDPEYRGQGLGKAMLRALIEFLFEDPGVDRIVLDPHEDNTRAIRLYEKAGFRKVGEFE 143 (152)
T ss_dssp GGSS---TTEEEEEEEESTGGGTTSSHHHHHHHHHHHHHHTSTT--EEEEEEBTT-HHHHHHHHHTT-EEEEEEE
T ss_pred cccccCCCCEEEEeeeeechhhcCCCHHHHHHHHHHHHHHhCCCCCEEEEecCcCCHHHHHHHHHcCCEEeeEEE
Confidence 1234567888999999999999999999999999987 899999996 78999999999999988643
No 32
>KOG3396 consensus Glucosamine-phosphate N-acetyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=99.40 E-value=8.6e-12 Score=95.09 Aligned_cols=78 Identities=32% Similarity=0.434 Sum_probs=70.2
Q ss_pred CCCCeEEEEEEEEeC------CCCcEEEEEEEECCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEeCHhhHHHHHhCCCe
Q 025840 159 NEQRTLIGMARATSD------HAFNATIWDVLVDPSYQGQGLGKALVEKVVRALLQKDIGNISLFADSQVVDFYRNLGFE 232 (247)
Q Consensus 159 ~~~g~iVG~~~~~~~------~~~~~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g~~~i~L~~n~~a~~fY~k~GF~ 232 (247)
.+.++|||.+.+... -+..++|.++.|++++||++||+.|+..++..+++.|+-.+.|++.+..+.||+|+||.
T Consensus 61 ~~s~~vigtatL~IE~KfIh~~g~rGhiEDVVV~~~~rgk~LGkllv~~Lv~l~k~lgcYKi~LdC~~~nv~FYeKcG~s 140 (150)
T KOG3396|consen 61 KESEKVIGTATLFIERKFIHGCGSRGHIEDVVVDSEYRGKQLGKLLVETLVDLAKSLGCYKIILDCDPKNVKFYEKCGYS 140 (150)
T ss_pred CCcCeEEEEEEEEEehhhhhcccccCceeEEEeChhhhhhHHhHHHHHHHHHHHHhcCcEEEEEecchhhhhHHHHcCcc
Confidence 357899999987643 23468999999999999999999999999999999999999999999999999999999
Q ss_pred ecCC
Q 025840 233 PDPE 236 (247)
Q Consensus 233 ~~~~ 236 (247)
..+.
T Consensus 141 ~~~~ 144 (150)
T KOG3396|consen 141 NAGN 144 (150)
T ss_pred ccch
Confidence 8763
No 33
>COG3153 Predicted acetyltransferase [General function prediction only]
Probab=99.39 E-value=3.5e-12 Score=102.74 Aligned_cols=124 Identities=22% Similarity=0.335 Sum_probs=92.7
Q ss_pred EEEEecCCCCCHHHHHHHHHHcCCCCCcHH---HHHHHH--hcceeEEEEEecccCCCCCCCCCCeEEEEEEEEe---C-
Q 025840 103 QIIFSSGGDVDVYELQTLCDKVGWPRRPLS---KLAAAL--KNSYLVATLHSIRKSPGSEGNEQRTLIGMARATS---D- 173 (247)
Q Consensus 103 ~i~~~~~~~~d~~~l~~l~~~~~w~~~~~~---~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~g~iVG~~~~~~---~- 173 (247)
++.++..+..|...+.++.++..++.+... .++... .....++ +.++|++||.+.++. .
T Consensus 3 ~~~ir~e~~~d~~~i~~~~~~aF~~~~e~~~v~~lR~~~~~~~~LslV------------A~d~g~vvG~Il~s~v~~~g 70 (171)
T COG3153 3 MMLIRTETPADIPAIEALTREAFGPGREAKLVDKLREGGRPDLTLSLV------------AEDDGEVVGHILFSPVTVGG 70 (171)
T ss_pred ccEEEecChhhHHHHHHHHHHHhhcchHHHHHHHHHhcCCcccceeEE------------EeeCCEEEEEEEEeEEEecC
Confidence 467788888899999999888766443322 222222 1122222 346899999998742 2
Q ss_pred -CCCcEEEEEEEECCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEeCHhhHHHHHhCCCeecCCceeee
Q 025840 174 -HAFNATIWDVLVDPSYQGQGLGKALVEKVVRALLQKDIGNISLFADSQVVDFYRNLGFEPDPEGIKGM 241 (247)
Q Consensus 174 -~~~~~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g~~~i~L~~n~~a~~fY~k~GF~~~~~~~~~~ 241 (247)
.....-+..++|+|+|||||||++|++..++.++..|...+.+..++ .+|.|+||+......-.+
T Consensus 71 ~~~~~~~LaPLaV~p~~qg~GIG~~Lvr~~le~a~~~G~~~v~vlGdp---~YY~rfGF~~~~~~~l~~ 136 (171)
T COG3153 71 EELGWLGLAPLAVDPEYQGQGIGSALVREGLEALRLAGASAVVVLGDP---TYYSRFGFEPAAGAKLYA 136 (171)
T ss_pred cccceEEEEeEEEchhhcCCcHHHHHHHHHHHHHHHCCCCEEEEecCc---ccccccCcEEcccccccc
Confidence 12346788999999999999999999999999999999999998888 789999999987654444
No 34
>PRK05279 N-acetylglutamate synthase; Validated
Probab=99.39 E-value=4.3e-12 Score=117.62 Aligned_cols=118 Identities=18% Similarity=0.251 Sum_probs=87.8
Q ss_pred EEEecCCCCCHHHHHHHHHH---cCCCC-CcHHHHHHHHhcceeEEEEEecccCCCCCCCCCCeEEEEEEEEeC-CCCcE
Q 025840 104 IIFSSGGDVDVYELQTLCDK---VGWPR-RPLSKLAAALKNSYLVATLHSIRKSPGSEGNEQRTLIGMARATSD-HAFNA 178 (247)
Q Consensus 104 i~~~~~~~~d~~~l~~l~~~---~~w~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~iVG~~~~~~~-~~~~~ 178 (247)
+.++.++..|.+++.+++.. ..|.. ...+.+..... .+.++. ++|++||++.+... ....+
T Consensus 295 ~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~~~l~~~~~-~~~va~-------------~dg~iVG~~~~~~~~~~~~~ 360 (441)
T PRK05279 295 EQLRRATIDDVGGILELIRPLEEQGILVRRSREQLEREID-KFTVIE-------------RDGLIIGCAALYPFPEEKMG 360 (441)
T ss_pred HHeEeCCHHHHHHHHHHHHHHHHcCCccccCHHHHhcccC-cEEEEE-------------ECCEEEEEEEEEEcCCCCeE
Confidence 45777788888888887653 23332 23333332222 222222 48999999977643 23468
Q ss_pred EEEEEEECCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEeCHhhHHHHHhCCCeecCC
Q 025840 179 TIWDVLVDPSYQGQGLGKALVEKVVRALLQKDIGNISLFADSQVVDFYRNLGFEPDPE 236 (247)
Q Consensus 179 ~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g~~~i~L~~n~~a~~fY~k~GF~~~~~ 236 (247)
+|..++|+|+|||+|+|++|+++++++|++.|+..+.+.+ ..+++||+|+||+.++.
T Consensus 361 ~I~~l~V~p~~Rg~GiG~~Ll~~l~~~a~~~g~~~l~l~~-~~a~~fY~k~GF~~~g~ 417 (441)
T PRK05279 361 EMACLAVHPDYRGSGRGERLLKRIEQRARQLGLKRLFVLT-TRTAHWFLERGFVPVDV 417 (441)
T ss_pred EEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEec-chHHHHHHHCcCEECCh
Confidence 9999999999999999999999999999999999887754 56899999999999875
No 35
>cd02169 Citrate_lyase_ligase Citrate lyase ligase. Citrate lyase ligase, also known as [Citrate (pro-3S)-lyase] ligase, is responsible for acetylation of the (2-(5''-phosphoribosyl)-3'-dephosphocoenzyme-A) prosthetic group of the gamma subunit of citrate lyase, converting the inactive thiol form of this enzyme to the active form. The acetylation of 1 molecule of deacetyl-citrate lyase to enzymatically active citrate lyase requires 6 molecules of ATP. The Adenylylyltranferase activity of the enzyme involves the formation of AMP and and pyrophosphate in the acetylation reaction.
Probab=99.38 E-value=1.9e-12 Score=113.67 Aligned_cols=71 Identities=27% Similarity=0.477 Sum_probs=65.6
Q ss_pred CCCeEEEEEEEEeCCCCcEEEEEEEECCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEeCHhhHHHHHhCCCeecC
Q 025840 160 EQRTLIGMARATSDHAFNATIWDVLVDPSYQGQGLGKALVEKVVRALLQKDIGNISLFADSQVVDFYRNLGFEPDP 235 (247)
Q Consensus 160 ~~g~iVG~~~~~~~~~~~~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g~~~i~L~~n~~a~~fY~k~GF~~~~ 235 (247)
++|++||++.+.. ..|..++|+|+|||+|+|++||+++++.+++.|+..+.|.++..+.+||+|+||+..+
T Consensus 13 ~~~~iVG~~~l~~-----~~I~~vaV~p~~Rg~GiG~~Ll~~l~~~a~~~g~~~i~L~t~~~~~~fYek~GF~~~~ 83 (297)
T cd02169 13 DAGELIATGSIAG-----NVLKCVAVCPKYQGEGLALKIVSELINKAYEEGIFHLFLFTKPKNAKFFRGLGFKELA 83 (297)
T ss_pred ECCEEEEEEEecc-----CEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEEcccHHHHHHHCCCEEec
Confidence 4799999998853 2699999999999999999999999999999999999999988889999999999987
No 36
>PLN02825 amino-acid N-acetyltransferase
Probab=99.38 E-value=6.4e-12 Score=117.46 Aligned_cols=116 Identities=19% Similarity=0.293 Sum_probs=88.9
Q ss_pred EecCCCCCHHHHHHHHHHc---CCC-CCcHHHHHHHHhcceeEEEEEecccCCCCCCCCCCeEEEEEEEEeC-CCCcEEE
Q 025840 106 FSSGGDVDVYELQTLCDKV---GWP-RRPLSKLAAALKNSYLVATLHSIRKSPGSEGNEQRTLIGMARATSD-HAFNATI 180 (247)
Q Consensus 106 ~~~~~~~d~~~l~~l~~~~---~w~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~iVG~~~~~~~-~~~~~~I 180 (247)
+|.++..|+..+.+++... ++. ..+.+.+...+. .+.++. +||++|||+.+... ....++|
T Consensus 370 IR~At~eDi~~I~~Li~~lee~g~lv~rs~e~le~ei~-~f~V~e-------------~Dg~IVG~aal~~~~~~~~aEI 435 (515)
T PLN02825 370 TRMARVEDLAGIRQIIRPLEESGILVRRTDEELLRALD-SFVVVE-------------REGSIIACAALFPFFEEKCGEV 435 (515)
T ss_pred heeCCHHHHHHHHHHHHHHHHcCCCcCCCHHHHHhcCC-cEEEEE-------------ECCEEEEEEEEEeecCCCcEEE
Confidence 6777888888888888652 222 234455554443 233322 39999999987543 3346899
Q ss_pred EEEEECCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEeCHhhHHHHHhCCCeecCC
Q 025840 181 WDVLVDPSYQGQGLGKALVEKVVRALLQKDIGNISLFADSQVVDFYRNLGFEPDPE 236 (247)
Q Consensus 181 ~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g~~~i~L~~n~~a~~fY~k~GF~~~~~ 236 (247)
..++|+|+|||+|+|++||+++++.|+++|++.+.+.+ ..+.+||+++||+..+.
T Consensus 436 ~~laV~P~yRGkGiG~~LL~~le~~Ar~~G~~~L~Llt-t~a~~fY~k~GF~~~~~ 490 (515)
T PLN02825 436 AAIAVSPECRGQGQGDKLLDYIEKKAASLGLEKLFLLT-TRTADWFVRRGFSECSI 490 (515)
T ss_pred EEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEe-CcHHHHHHHCCCEEeCh
Confidence 99999999999999999999999999999999999987 45789999999998764
No 37
>PRK10514 putative acetyltransferase; Provisional
Probab=99.36 E-value=1.6e-11 Score=96.12 Aligned_cols=114 Identities=18% Similarity=0.328 Sum_probs=76.9
Q ss_pred EEEecCCCCCHHHHHHHHHHc-----CCCC-CcHHHHHH----HHhcceeEEEEEecccCCCCCCCCCCeEEEEEEEEeC
Q 025840 104 IIFSSGGDVDVYELQTLCDKV-----GWPR-RPLSKLAA----ALKNSYLVATLHSIRKSPGSEGNEQRTLIGMARATSD 173 (247)
Q Consensus 104 i~~~~~~~~d~~~l~~l~~~~-----~w~~-~~~~~~~~----~~~~~~~v~~~~~~~~~~~~~~~~~g~iVG~~~~~~~ 173 (247)
+.++..+..|.+.+.+++... .|.. ...+.+.. ..+....++.. .++|++||++.+..
T Consensus 2 ~~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~iG~~~~~~- 69 (145)
T PRK10514 2 ISIRRSRHEEGERLVAIWRRSVDATHDFLSAEDRAEIEELVRSFLPEAPLWVAV-----------DERDQPVGFMLLSG- 69 (145)
T ss_pred ceeeecchhhHHHHHHHHHHHHHHhCcccCchhHHHHHHHHHHHhccCceEEEE-----------ecCCcEEEEEEEec-
Confidence 456677788888888877641 2211 12222222 22222222222 14789999988742
Q ss_pred CCCcEEEEEEEECCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEE---eCHhhHHHHHhCCCeecCCce
Q 025840 174 HAFNATIWDVLVDPSYQGQGLGKALVEKVVRALLQKDIGNISLF---ADSQVVDFYRNLGFEPDPEGI 238 (247)
Q Consensus 174 ~~~~~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g~~~i~L~---~n~~a~~fY~k~GF~~~~~~~ 238 (247)
.++..++|+|+|||+|+|++|++.+++.+. .+.+. .|..+++||+|+||+..+...
T Consensus 70 ----~~~~~~~v~p~~rgkGig~~Ll~~~~~~~~-----~i~~~v~~~N~~a~~~yek~Gf~~~~~~~ 128 (145)
T PRK10514 70 ----GHMEALFVDPDVRGCGVGRMLVEHALSLHP-----ELTTDVNEQNEQAVGFYKKMGFKVTGRSE 128 (145)
T ss_pred ----CcEeEEEECHHhccCCHHHHHHHHHHHhcc-----ccEEEeecCCHHHHHHHHHCCCEEecccc
Confidence 356789999999999999999999998753 23333 489999999999999987633
No 38
>PRK13688 hypothetical protein; Provisional
Probab=99.34 E-value=3.9e-12 Score=101.77 Aligned_cols=82 Identities=26% Similarity=0.457 Sum_probs=62.4
Q ss_pred CCCeEEEEEEEEeC----------CCCcEEEEEEEECCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEeCHhhHHHHHhC
Q 025840 160 EQRTLIGMARATSD----------HAFNATIWDVLVDPSYQGQGLGKALVEKVVRALLQKDIGNISLFADSQVVDFYRNL 229 (247)
Q Consensus 160 ~~g~iVG~~~~~~~----------~~~~~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g~~~i~L~~n~~a~~fY~k~ 229 (247)
+++++||++.+... ....++|..++|+|+|||+|+|++|++.+. +.++. +.+.++..+.+||+|+
T Consensus 52 ~~~~~VG~~~l~~~dg~~~~~~~~~~~~~~L~~l~V~p~~rgkGiG~~Ll~~a~----~~~~~-~~~~~~~~a~~FY~k~ 126 (156)
T PRK13688 52 YGDSLVARMSLYKKGGVEEPYFEDTQDYLELWKLEVLPKYQNRGYGEMLVDFAK----SFQLP-IKTIARNKSKDFWLKL 126 (156)
T ss_pred ECCEEEEEEEEEecCCcccccccCCCCeEEEEEEEECHHHcCCCHHHHHHHHHH----HhCCe-EEEEeccchHHHHHhC
Confidence 48999999876422 234578999999999999999999998543 34544 4555555689999999
Q ss_pred CCeecCCc----eeeeEecCC
Q 025840 230 GFEPDPEG----IKGMFWHPK 246 (247)
Q Consensus 230 GF~~~~~~----~~~~~w~~~ 246 (247)
||+.++.. ...+.|.|+
T Consensus 127 GF~~~~~~~d~~~~~~~~~p~ 147 (156)
T PRK13688 127 GFTPVEYKNDEGEDPLVWHPE 147 (156)
T ss_pred CCEEeEEecCCCcceEEECcC
Confidence 99988744 447788885
No 39
>KOG2488 consensus Acetyltransferase (GNAT) domain-containing protein [General function prediction only]
Probab=99.33 E-value=1.6e-11 Score=98.76 Aligned_cols=115 Identities=18% Similarity=0.310 Sum_probs=90.3
Q ss_pred HHHHHHHHcCCCCCcHHHHHHHHhcceeEEEEEecccCCCCCCCCCCeEEEEEEEEeC---CCCcEEEEEEEECCCCCCC
Q 025840 116 ELQTLCDKVGWPRRPLSKLAAALKNSYLVATLHSIRKSPGSEGNEQRTLIGMARATSD---HAFNATIWDVLVDPSYQGQ 192 (247)
Q Consensus 116 ~l~~l~~~~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~iVG~~~~~~~---~~~~~~I~~l~V~p~~Rg~ 192 (247)
.+.+.|.+..|.+.+.+.....-.+...++.++. ..+++|||.....+ +....|+..|-|.++|||+
T Consensus 66 nm~~~Y~qs~~Gw~~~~K~~El~~~~~~Yi~a~~----------~~~~~vgf~~Frf~vd~g~~vlYcyEvqv~~~yR~k 135 (202)
T KOG2488|consen 66 NMGAMYRQSSWGWDDNSKAKELRNRKLRYICAWN----------NKSKLVGFTMFRFTVDTGDPVLYCYEVQVASAYRGK 135 (202)
T ss_pred hhHHHhhhcccccCchhHHHHHhhccceEEEEEc----------CCCceeeEEEEEEEcccCCeEEEEEEEeehhhhhcc
Confidence 3445666677777777666666666655666552 23489999987654 3357899999999999999
Q ss_pred CHHHHHHHHHHHHHHhCCCCEEEEEe---CHhhHHHHHhCCCeecCCceee
Q 025840 193 GLGKALVEKVVRALLQKDIGNISLFA---DSQVVDFYRNLGFEPDPEGIKG 240 (247)
Q Consensus 193 GlG~~Ll~~~~~~a~~~g~~~i~L~~---n~~a~~fY~k~GF~~~~~~~~~ 240 (247)
|||+.||+.+...+.....+.|.|.+ |.+|++||.++||....+.+..
T Consensus 136 GiGk~LL~~l~~~a~~~~~~kVmLTVf~~N~~al~Fy~~~gf~~~~~sp~~ 186 (202)
T KOG2488|consen 136 GIGKFLLDTLEKLADSRHMRKVMLTVFSENIRALGFYHRLGFVVDEESPCD 186 (202)
T ss_pred ChHHHHHHHHHHHHHHHHhhhheeeeecccchhHHHHHHcCcccCCCCCcc
Confidence 99999999999999988888888886 8999999999999998765543
No 40
>PRK01346 hypothetical protein; Provisional
Probab=99.32 E-value=2.6e-11 Score=111.28 Aligned_cols=120 Identities=17% Similarity=0.155 Sum_probs=87.0
Q ss_pred EEEEecCCCCCHHHHHHHHHHcCCCCCcH---HHHHHHHhcceeEEEEEecccCCCCCCCCCCeEEEEEEEEeCC-----
Q 025840 103 QIIFSSGGDVDVYELQTLCDKVGWPRRPL---SKLAAALKNSYLVATLHSIRKSPGSEGNEQRTLIGMARATSDH----- 174 (247)
Q Consensus 103 ~i~~~~~~~~d~~~l~~l~~~~~w~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~iVG~~~~~~~~----- 174 (247)
.+.++..+..|.+++.++.........+. +.+....+....+++. ++|++||++.+....
T Consensus 6 ~~~iR~~~~~D~~~i~~L~~~~f~~~~~~~~~~~~~~~~~~~~~~va~------------~~~~lvg~~~~~~~~~~~~~ 73 (411)
T PRK01346 6 AITIRTATEEDWPAWFRAAATGFGDSPSDEELEAWRALVEPDRTLGAF------------DGDEVVGTAGAFDLRLTVPG 73 (411)
T ss_pred CceeecCCHHHHHHHHHHHHHHcCCCCChHHHHHHHHhcCcCCeEEEE------------ECCEEEEEEEEeccccccCC
Confidence 35677777778888888876643221122 2233333333333332 489999999875321
Q ss_pred C---CcEEEEEEEECCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEeCHhhHHHHHhCCCeecCC
Q 025840 175 A---FNATIWDVLVDPSYQGQGLGKALVEKVVRALLQKDIGNISLFADSQVVDFYRNLGFEPDPE 236 (247)
Q Consensus 175 ~---~~~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g~~~i~L~~n~~a~~fY~k~GF~~~~~ 236 (247)
. ..++|..|+|+|+|||+|+|++||+++++.+++.|...+.|.+.. .+||+|+||+....
T Consensus 74 ~~~~~~~~i~~v~V~P~~RgrGig~~Ll~~~l~~a~~~g~~~~~L~~~~--~~~Y~r~Gf~~~~~ 136 (411)
T PRK01346 74 GAVLPAAGVTAVTVAPTHRRRGLLTALMREQLRRIRERGEPVAALTASE--GGIYGRFGYGPATY 136 (411)
T ss_pred CCccceeEEEEEEEChhhcCCCHHHHHHHHHHHHHHHCCCcEEEEECCc--hhhHhhCCCeeccc
Confidence 2 358999999999999999999999999999999999888888655 47999999998764
No 41
>COG1247 Sortase and related acyltransferases [Cell envelope biogenesis, outer membrane]
Probab=99.30 E-value=9.6e-11 Score=94.23 Aligned_cols=126 Identities=17% Similarity=0.266 Sum_probs=90.8
Q ss_pred EEEecCCCCCHHHHHHHHHHc------CCCC--CcHHHHH----HHHhcceeEEEEEecccCCCCCCCCCCeEEEEEEEE
Q 025840 104 IIFSSGGDVDVYELQTLCDKV------GWPR--RPLSKLA----AALKNSYLVATLHSIRKSPGSEGNEQRTLIGMARAT 171 (247)
Q Consensus 104 i~~~~~~~~d~~~l~~l~~~~------~w~~--~~~~~~~----~~~~~~~~v~~~~~~~~~~~~~~~~~g~iVG~~~~~ 171 (247)
+.+++++..|++.+.+.|... -|.. .+.+.+. ...+.++.+++.. +++|+++|++.+.
T Consensus 2 ~~ir~~~~~Dl~~I~~IY~~~v~~~~a~~e~~~~~~~~~~~~~~~~~~~g~p~~V~~----------~~~g~v~G~a~~~ 71 (169)
T COG1247 2 MEIRPATAADLEAILEIYNGAVENTAATFEEDPVSLEERAAWFSGRTRDGYPVVVAE----------EEDGKVLGYASAG 71 (169)
T ss_pred cEEecChHHhHHHHHHHHHHhhhcceEEEeccCCCHHHHHHHHHhcccCCceEEEEE----------cCCCeEEEEEEee
Confidence 457778888999999998873 1222 2333333 2233344444432 2469999999885
Q ss_pred eCCC----CcEEEEEEEECCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEe---CHhhHHHHHhCCCeecCCcee
Q 025840 172 SDHA----FNATIWDVLVDPSYQGQGLGKALVEKVVRALLQKDIGNISLFA---DSQVVDFYRNLGFEPDPEGIK 239 (247)
Q Consensus 172 ~~~~----~~~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g~~~i~L~~---n~~a~~fY~k~GF~~~~~~~~ 239 (247)
.... ....-..++|+|++||+|+|++|++.+++.+..+|...+.... |.++++|.+++||+.++....
T Consensus 72 ~fr~r~ay~~tve~SiYv~~~~~g~GiG~~Ll~~Li~~~~~~g~~~lva~I~~~n~aSi~lh~~~GF~~~G~~~~ 146 (169)
T COG1247 72 PFRERPAYRHTVELSIYLDPAARGKGLGKKLLQALITEARALGVRELVAGIESDNLASIALHEKLGFEEVGTFPE 146 (169)
T ss_pred eccCccccceEEEEEEEECcccccccHHHHHHHHHHHHHHhCCeEEEEEEEcCCCcHhHHHHHHCCCEEeccccc
Confidence 4322 1233447999999999999999999999999999998776663 889999999999999886443
No 42
>PRK10562 putative acetyltransferase; Provisional
Probab=99.30 E-value=4.4e-11 Score=93.94 Aligned_cols=68 Identities=26% Similarity=0.455 Sum_probs=56.0
Q ss_pred CCCeEEEEEEEEeCCCCcEEEEEEEECCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEE---eCHhhHHHHHhCCCeecCC
Q 025840 160 EQRTLIGMARATSDHAFNATIWDVLVDPSYQGQGLGKALVEKVVRALLQKDIGNISLF---ADSQVVDFYRNLGFEPDPE 236 (247)
Q Consensus 160 ~~g~iVG~~~~~~~~~~~~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g~~~i~L~---~n~~a~~fY~k~GF~~~~~ 236 (247)
++|++||++.+... ..|..++|+|+|||+|+|++|++.+++.+ ..+.+. .|..+++||+|+||+.++.
T Consensus 55 ~~~~~iG~~~~~~~----~~i~~~~v~~~~rg~G~g~~ll~~~~~~~-----~~~~~~v~~~N~~s~~~y~k~Gf~~~~~ 125 (145)
T PRK10562 55 EDGKLLGFVSVLEG----RFVGALFVAPKAVRRGIGKALMQHVQQRY-----PHLSLEVYQKNQRAVNFYHAQGFRIVDS 125 (145)
T ss_pred ECCEEEEEEEEeec----cEEEEEEECHHHcCCCHHHHHHHHHHhhC-----CeEEEEEEcCChHHHHHHHHCCCEEccc
Confidence 37899999987532 36888999999999999999999998753 344444 3889999999999999875
No 43
>PRK10151 ribosomal-protein-L7/L12-serine acetyltransferase; Provisional
Probab=99.29 E-value=1.6e-10 Score=93.94 Aligned_cols=121 Identities=17% Similarity=0.207 Sum_probs=85.7
Q ss_pred EEEecCCCCCHHHHHHHHHH--------cCCCCC--cHHHHHHHHh-------cc--eeEEEEEecccCCCCCCCCCCeE
Q 025840 104 IIFSSGGDVDVYELQTLCDK--------VGWPRR--PLSKLAAALK-------NS--YLVATLHSIRKSPGSEGNEQRTL 164 (247)
Q Consensus 104 i~~~~~~~~d~~~l~~l~~~--------~~w~~~--~~~~~~~~~~-------~~--~~v~~~~~~~~~~~~~~~~~g~i 164 (247)
+.+++....|...+..++.. ..|+.. +.+...+.+. .. ..++.. ++|++
T Consensus 11 l~Lr~~~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~------------~~~~~ 78 (179)
T PRK10151 11 LELHAVDESHVTPLHQLVCKNKTWLQQSLNWPQFVQSEEDTRKTVQGNVMLHQRGYAKMFMIF------------KEDEL 78 (179)
T ss_pred EEEEeCCHHHHHHHHHHHHHhHHHHHhcCCCcCccCCHHHHHHHHHHHHHHHhcCCcEEEEEE------------ECCEE
Confidence 56777777888888887632 124432 3333333222 11 123322 38899
Q ss_pred EEEEEEEeC--CCCcEEEEEEEECCCCCCCCHHHHHHHHHHHHHHh-CCCCEEEEEe---CHhhHHHHHhCCCeecCCc
Q 025840 165 IGMARATSD--HAFNATIWDVLVDPSYQGQGLGKALVEKVVRALLQ-KDIGNISLFA---DSQVVDFYRNLGFEPDPEG 237 (247)
Q Consensus 165 VG~~~~~~~--~~~~~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~-~g~~~i~L~~---n~~a~~fY~k~GF~~~~~~ 237 (247)
||++.+... ....++|+ +.++|+|||+|+|+.++..+++++.+ .|++++.+.+ |.+++++|+|+||+.++..
T Consensus 79 iG~~~l~~~~~~~~~~~ig-~~i~~~~~g~G~~tea~~~l~~~~~~~~~~~ri~~~v~~~N~~S~~v~ek~Gf~~~g~~ 156 (179)
T PRK10151 79 IGVLSFNRIEPLNKTAYIG-YWLDESHQGQGIISQALQALIHHYAQSGELRRFVIKCRVDNPASNQVALRNGFTLEGCL 156 (179)
T ss_pred EEEEEEEeeccCCCceEEE-EEEChhhcCCcHHHHHHHHHHHHHHhhCCccEEEEEEcCCCHHHHHHHHHCCCEEEeEe
Confidence 999987542 22457775 57999999999999999999999986 4799988875 8999999999999987753
No 44
>PHA01807 hypothetical protein
Probab=99.28 E-value=5.2e-11 Score=94.93 Aligned_cols=70 Identities=16% Similarity=0.265 Sum_probs=58.5
Q ss_pred CCCeEEEEEEEEeCCCC-cEE---EEEEEECCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEe---CHhhHHHHHhC
Q 025840 160 EQRTLIGMARATSDHAF-NAT---IWDVLVDPSYQGQGLGKALVEKVVRALLQKDIGNISLFA---DSQVVDFYRNL 229 (247)
Q Consensus 160 ~~g~iVG~~~~~~~~~~-~~~---I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g~~~i~L~~---n~~a~~fY~k~ 229 (247)
++|++||++.+...... .+. +..|+|+|+|||+|+|++||+.+++.+++.|+..+.+.+ |.+|++||++.
T Consensus 60 ~dg~lvG~~~l~~~~~~~~~~i~~l~~lYV~pe~RG~GiG~~Ll~~~~~~Ar~~G~~~l~l~v~~~n~~a~~~y~~~ 136 (153)
T PHA01807 60 RDGKLAGIAVLVFEDDPHVGPCLGVQWQYVLPEYRNAGVAREFLRELIRLAGEGNLPLIAFSHREGEGRYTIHYRRV 136 (153)
T ss_pred ECCEEEEEEEEEcCCCcceeeeccceeEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEecCCcHHHHHHHHhc
Confidence 38999999988644322 223 445799999999999999999999999999999999886 67899999984
No 45
>TIGR03448 mycothiol_MshD mycothiol biosynthesis acetyltransferase. Members of this family are MshD, the acetyltransferase that catalyzes the final step of mycothiol biosynthesis in various members of the Actinomyctes, Mycothiol replaces glutathione in these species.
Probab=99.28 E-value=2.4e-11 Score=106.27 Aligned_cols=75 Identities=16% Similarity=0.290 Sum_probs=60.1
Q ss_pred CCCeEEEEEEEEeCCCCcEEEEEEEECCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEE-eCHhhHHHHHhCCCeecCC
Q 025840 160 EQRTLIGMARATSDHAFNATIWDVLVDPSYQGQGLGKALVEKVVRALLQKDIGNISLF-ADSQVVDFYRNLGFEPDPE 236 (247)
Q Consensus 160 ~~g~iVG~~~~~~~~~~~~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g~~~i~L~-~n~~a~~fY~k~GF~~~~~ 236 (247)
++|++||++.+........+|..++|+|+|||+|||++|++++++.+. +...+++. .|..|++||+++||+....
T Consensus 53 ~~~~~vG~~~~~~~~~~~~~~~~l~V~p~~rg~GiG~~Ll~~~~~~~~--~~~~~~~~~~n~~a~~fy~~~Gf~~~~~ 128 (292)
T TIGR03448 53 DSDPIVGYANLVPARGTDPAMAELVVHPAHRRRGIGRALIRALLAKGG--GRLRVWAHGDLPAARALASRLGLVPTRE 128 (292)
T ss_pred ECCEEEEEEEEEcCCCCcceEEEEEECHhhcCCCHHHHHHHHHHHhcc--CceEEEEcCCCHHHHHHHHHCCCEEccE
Confidence 388999999887654445789999999999999999999999999864 22233333 2678999999999998754
No 46
>PF08445 FR47: FR47-like protein; InterPro: IPR013653 Proteins in this entry have a conserved region similar to the C-terminal region of the Drosophila melanogaster (Fruit fly) hypothetical protein FR47 (Q9VR51 from SWISSPROT). This protein has been found to consist of two N-acyltransferase-like domains swapped with the C-terminal strands. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups; PDB: 1SQH_A 3EC4_B.
Probab=99.28 E-value=4.5e-11 Score=86.17 Aligned_cols=70 Identities=26% Similarity=0.405 Sum_probs=53.9
Q ss_pred CCeEEEEEEEEeCCCCcEEEEEEEECCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEE---eCHhhHHHHHhCCCeecC
Q 025840 161 QRTLIGMARATSDHAFNATIWDVLVDPSYQGQGLGKALVEKVVRALLQKDIGNISLF---ADSQVVDFYRNLGFEPDP 235 (247)
Q Consensus 161 ~g~iVG~~~~~~~~~~~~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g~~~i~L~---~n~~a~~fY~k~GF~~~~ 235 (247)
.+++++.+.. .. .+.|..++|+|+|||+|+|+.|+..+.+.+.+.|... .+. .|.+|++||+|+||+...
T Consensus 9 ~~~l~~~~~~---~~-~g~i~~v~t~p~~RrrGlg~~lv~~l~~~~~~~g~~~-~l~v~~~N~~s~~ly~klGf~~~~ 81 (86)
T PF08445_consen 9 LVALVAWIIR---SD-DGEIGGVYTLPEHRRRGLGSALVAALARELLERGKTP-FLYVDADNEASIRLYEKLGFREIE 81 (86)
T ss_dssp CEEEEEEEEE---SC-TCCEEEEEE-GGGTTSSHHHHHHHHHHHHHHHTTSEE-EEEEETT-HHHHHHHHHCT-EEEE
T ss_pred ccceeeEeee---CC-CcEEEEEEECHHHcCCCHHHHHHHHHHHHHHhCCCcE-EEEEECCCHHHHHHHHHcCCEEEE
Confidence 3455655543 22 2789999999999999999999999999999998764 444 388999999999999874
No 47
>PRK10809 ribosomal-protein-S5-alanine N-acetyltransferase; Provisional
Probab=99.26 E-value=2.4e-10 Score=94.12 Aligned_cols=76 Identities=20% Similarity=0.331 Sum_probs=63.5
Q ss_pred CCCeEEEEEEEEeCC--C-CcEEEEEEEECCCCCCCCHHHHHHHHHHHHHHh-CCCCEEEEEe---CHhhHHHHHhCCCe
Q 025840 160 EQRTLIGMARATSDH--A-FNATIWDVLVDPSYQGQGLGKALVEKVVRALLQ-KDIGNISLFA---DSQVVDFYRNLGFE 232 (247)
Q Consensus 160 ~~g~iVG~~~~~~~~--~-~~~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~-~g~~~i~L~~---n~~a~~fY~k~GF~ 232 (247)
++|++||.+.+.... . ..++| .+.|+|+|||+|+|+.+++.+++++.+ .|++.+.+.+ |.+|+++|+|+||+
T Consensus 84 ~~~~~iG~i~l~~~~~~~~~~~ei-g~~i~~~~~G~G~~~ea~~~ll~~~~~~l~l~~i~~~v~~~N~~S~~l~ek~Gf~ 162 (194)
T PRK10809 84 DEKEIIGVANFSNVVRGSFHACYL-GYSLGQKWQGQGLMFEALQAAIRYMQRQQHMHRIMANYMPHNKRSGDLLARLGFE 162 (194)
T ss_pred CCCeEEEEEEEEeecCCCeeeEEE-EEEECHHHcCCCHHHHHHHHHHHHHHhcCCceEEEEEeeCCCHHHHHHHHHCCCc
Confidence 368999999875322 1 23455 578999999999999999999999987 5999999986 88999999999999
Q ss_pred ecCC
Q 025840 233 PDPE 236 (247)
Q Consensus 233 ~~~~ 236 (247)
.++.
T Consensus 163 ~~g~ 166 (194)
T PRK10809 163 KEGY 166 (194)
T ss_pred EEee
Confidence 8664
No 48
>PRK15130 spermidine N1-acetyltransferase; Provisional
Probab=99.25 E-value=2.5e-10 Score=93.30 Aligned_cols=122 Identities=17% Similarity=0.316 Sum_probs=84.6
Q ss_pred eEEEEecCCCCCHHHHHHHHHHc----CCCCCc---HHHH----HHHHh--cceeEEEEEecccCCCCCCCCCCeEEEEE
Q 025840 102 EQIIFSSGGDVDVYELQTLCDKV----GWPRRP---LSKL----AAALK--NSYLVATLHSIRKSPGSEGNEQRTLIGMA 168 (247)
Q Consensus 102 ~~i~~~~~~~~d~~~l~~l~~~~----~w~~~~---~~~~----~~~~~--~~~~v~~~~~~~~~~~~~~~~~g~iVG~~ 168 (247)
+.+.+++.+..|.+.+.++.... .|...+ .... ..... ....+++. ++|++||++
T Consensus 5 ~~l~lR~~~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~------------~~g~~iG~~ 72 (186)
T PRK15130 5 HSVKLRPLEREDLRFVHQLDNNASVMRYWFEEPYEAFVELSDLYDKHIHDQSERRFVVE------------CDGEKAGLV 72 (186)
T ss_pred CeeEEecCCHHHHHHHHHHhcChHHHhhcCCcccccHHHHHHHHHHhhhcccCcEEEEE------------ECCEEEEEE
Confidence 34567777777888888776542 333221 1111 12211 12223332 389999999
Q ss_pred EEEeCC--CCcEEEEEEEECCCCCCCCHHHHHHHHHHHHHHh-CCCCEEEEEe---CHhhHHHHHhCCCeecCC
Q 025840 169 RATSDH--AFNATIWDVLVDPSYQGQGLGKALVEKVVRALLQ-KDIGNISLFA---DSQVVDFYRNLGFEPDPE 236 (247)
Q Consensus 169 ~~~~~~--~~~~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~-~g~~~i~L~~---n~~a~~fY~k~GF~~~~~ 236 (247)
.+.... ...+.+ .++|+|+|||+|+|+++++.+++++.+ .|++++.+.+ |.+|++||+|+||+.++.
T Consensus 73 ~~~~~~~~~~~~~~-~~~v~~~~~g~G~g~~l~~~l~~~~~~~~~~~rv~~~v~~~N~~s~~~yek~GF~~~~~ 145 (186)
T PRK15130 73 ELVEINHVHRRAEF-QIIISPEYQGKGLATRAAKLAMDYGFTVLNLYKLYLIVDKENEKAIHIYRKLGFEVEGE 145 (186)
T ss_pred EEEeecCCCCeEEE-EEEECHHHcCCCHHHHHHHHHHHHHhhcCCceEEEEEEccCCHHHHHHHHHCCCEEEEE
Confidence 875422 224555 599999999999999999999999986 5999998885 889999999999998764
No 49
>PF12746 GNAT_acetyltran: GNAT acetyltransferase; PDB: 3G3S_B.
Probab=99.24 E-value=1.1e-10 Score=100.57 Aligned_cols=154 Identities=19% Similarity=0.302 Sum_probs=100.9
Q ss_pred hhhhHHHHHhcccccC--ceeeec--CCCC-Cccc----ccCCCCCceEEeeccCCCCceeEEEEecCCCCCHHHHHHHH
Q 025840 51 KARFWESIRSGFLKNN--STQVME--APPD-LEEE----EEEPMPEEFVLIEKTQPDGVIEQIIFSSGGDVDVYELQTLC 121 (247)
Q Consensus 51 ~~~~w~~~~~~~~~~~--~~~~~~--~~~~-~~~~----~~~~lp~~~~l~~~~~~~~~~~~i~~~~~~~~d~~~l~~l~ 121 (247)
+..-|+..+...+++. +..+.. ..+. -+.. ....+|+++.++.. |...+....
T Consensus 82 ~~~~W~~~ie~~~~~~l~~~~Ry~~~~~~~~Fd~~~l~~~~~~lp~~y~l~~I------------------de~l~~~~~ 143 (265)
T PF12746_consen 82 QSEEWEKFIEEIFKDKLRKFTRYAFKKEPEVFDKEKLKKYVSALPEGYELKRI------------------DEELYENSL 143 (265)
T ss_dssp SSHHHHHHHHHHHGGGEEEEEEEEE-SS-----HHHHHHHHHCS-TTCEEEE--------------------HHHHHHHH
T ss_pred CCHHHHHHHHHHHhhhhhheeeeeeeeccccccHHHHHHHHhcCCCCeEEEEC------------------CHHHHHhhh
Confidence 7778999999987662 222221 1111 1111 11479999999854 444444443
Q ss_pred HHcCCCCC---cHHHHHHHHhcceeEEEEEecccCCCCCCCCCCeEEEEEEEEeCCCCcEEEEEEEECCCCCCCCHHHHH
Q 025840 122 DKVGWPRR---PLSKLAAALKNSYLVATLHSIRKSPGSEGNEQRTLIGMARATSDHAFNATIWDVLVDPSYQGQGLGKAL 198 (247)
Q Consensus 122 ~~~~w~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~iVG~~~~~~~~~~~~~I~~l~V~p~~Rg~GlG~~L 198 (247)
...|... ........+.+++.+++++ +|+||+-|..........+| +|.++|+|||||||+.+
T Consensus 144 -~e~~s~d~~~~~~s~e~Fl~~G~Gf~i~~------------~~~iVs~~~s~~~~~~~~EI-~I~T~~~yR~kGLA~~~ 209 (265)
T PF12746_consen 144 -EEEWSEDLVSQFSSYEDFLKNGFGFCILH------------DGEIVSGCSSYFVYENGIEI-DIETHPEYRGKGLATAV 209 (265)
T ss_dssp -HSCCCGGGTTTSSSHHHHHHH--EEEEEE------------TTEEEEEEEEEEEETTEEEE-EEEE-CCCTTSSHHHHH
T ss_pred -hhHhHHHHHHhcCCHHHHHhcCcEEEEEE------------CCEEEEEEEEEEEECCEEEE-EEEECHHhhcCCHHHHH
Confidence 2345431 1122334667777777765 89999887765555556778 79999999999999999
Q ss_pred HHHHHHHHHhCCCCEEEEEeCHhhHHHHHhCCCeecCC
Q 025840 199 VEKVVRALLQKDIGNISLFADSQVVDFYRNLGFEPDPE 236 (247)
Q Consensus 199 l~~~~~~a~~~g~~~i~L~~n~~a~~fY~k~GF~~~~~ 236 (247)
..+++..|.++|+...|-+.|.+++++-+|+||+...+
T Consensus 210 aa~~I~~Cl~~~l~P~WDc~N~~S~~lA~kLGf~~~~~ 247 (265)
T PF12746_consen 210 AAAFILECLENGLYPSWDCHNLASIALAEKLGFHFDFE 247 (265)
T ss_dssp HHHHHHHHHHTT-EEE-EESSHHHHHHHHHCT--EEEE
T ss_pred HHHHHHHHHHCCCCcCeeCCCHHHHHHHHHcCCcccce
Confidence 99999999999999999999999999999999998754
No 50
>PF13302 Acetyltransf_3: Acetyltransferase (GNAT) domain; PDB: 3TTH_C 3JUW_A 2ZXV_A 2Z0Z_A 2VI7_B 3EG7_F 1YRE_C 3IGR_B 3FBU_A 2FCK_A ....
Probab=99.18 E-value=1.2e-09 Score=84.64 Aligned_cols=118 Identities=17% Similarity=0.257 Sum_probs=81.3
Q ss_pred EEEecCCCCCHHHHHHHHHH---cC---CCCC--cHHHHHHHHh-------c--ceeEEEEEecccCCCCCCCCCCeEEE
Q 025840 104 IIFSSGGDVDVYELQTLCDK---VG---WPRR--PLSKLAAALK-------N--SYLVATLHSIRKSPGSEGNEQRTLIG 166 (247)
Q Consensus 104 i~~~~~~~~d~~~l~~l~~~---~~---w~~~--~~~~~~~~~~-------~--~~~v~~~~~~~~~~~~~~~~~g~iVG 166 (247)
+.+++....|.+.+.++... .. |... +.+...+.+. . ...+++.. .+++++||
T Consensus 2 l~lr~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~----------~~~~~~iG 71 (142)
T PF13302_consen 2 LTLRPLTPEDADAIYEWRSDPEIRRYLPWGPPWPTLEEAEEWIQSRQDSWENHGYYYFAIED----------KDDGEIIG 71 (142)
T ss_dssp EEEEE-HGGGHHHHHHHHTTTTHCTTSSTTTSSSSHHHHHHHHHHHHHCHHEETEEEEEEEE----------TTTTEEEE
T ss_pred EEEEcCCHHHHHHHHHHhcCHHHHHhcCCCCCCCCHHHHHHHHHHhhhhhhcccceEEEEEe----------ccCCceEE
Confidence 56677778888988888753 12 3332 4333222222 1 11222221 23568999
Q ss_pred EEEEEeC--CCCcEEEEEEEECCCCCCCCHHHHHHHHHHHHHH-hCCCCEEEEEe---CHhhHHHHHhCCCe
Q 025840 167 MARATSD--HAFNATIWDVLVDPSYQGQGLGKALVEKVVRALL-QKDIGNISLFA---DSQVVDFYRNLGFE 232 (247)
Q Consensus 167 ~~~~~~~--~~~~~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~-~~g~~~i~L~~---n~~a~~fY~k~GF~ 232 (247)
++.+... ....++|. +.|.|+|||+|+|+.++..+++++. +.|+..+...+ |.+++++++|+||+
T Consensus 72 ~i~~~~~~~~~~~~eig-~~i~~~~~g~G~~~~~~~~~~~~~~~~~~~~~i~a~~~~~N~~s~~~~~k~GF~ 142 (142)
T PF13302_consen 72 FIGLYNIDKNNNWAEIG-YWIGPDYRGKGYGTEALKLLLDWAFEELGLHRIIATVMADNEASRRLLEKLGFE 142 (142)
T ss_dssp EEEEEEEETTTTEEEEE-EEEEGGGTTSSHHHHHHHHHHHHHHHTSTSSEEEEEEETT-HHHHHHHHHTT-E
T ss_pred EeeeeecccCCCccccc-cchhHHHHhhhHHHHHHHHHHHHHHhcCCcEEEEEEECcCCHHHHHHHHHcCCC
Confidence 9998432 35567875 8899999999999999999999995 67999998886 89999999999996
No 51
>TIGR00124 cit_ly_ligase [citrate (pro-3S)-lyase] ligase. ATP is cleaved to AMP and pyrophosphate during the reaction. The carboxyl end is homologous to a number of cytidyltransferases that also release pyrophosphate.
Probab=99.18 E-value=2.5e-10 Score=101.76 Aligned_cols=74 Identities=20% Similarity=0.324 Sum_probs=66.9
Q ss_pred CCCeEEEEEEEEeCCCCcEEEEEEEECCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEeCHhhHHHHHhCCCeecCCce
Q 025840 160 EQRTLIGMARATSDHAFNATIWDVLVDPSYQGQGLGKALVEKVVRALLQKDIGNISLFADSQVVDFYRNLGFEPDPEGI 238 (247)
Q Consensus 160 ~~g~iVG~~~~~~~~~~~~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g~~~i~L~~n~~a~~fY~k~GF~~~~~~~ 238 (247)
++|++||++.+.. ..|..|+|+|+|||+|+|+.||.++++.+++.|...+.|.+.+...+||+++||.......
T Consensus 38 ~~~~lVg~g~l~g-----~~ik~vaV~~~~rG~Glg~~L~~~L~~~a~~~G~~~l~l~Tk~~~~~fy~klGF~~i~~~~ 111 (332)
T TIGR00124 38 EDEEIIGCGGIAG-----NVIKCVAIDESLRGEGLALQLMTELENLAYELGRFHLFIFTKPEYAALFEYCGFKTLAEAK 111 (332)
T ss_pred ECCEEEEEEEEec-----CEEEEEEEcHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEEECchHHHHHHHcCCEEeeeec
Confidence 3899999998842 2588999999999999999999999999999999999999988888999999999987654
No 52
>TIGR03585 PseH pseudaminic acid biosynthesis N-acetyl transferase. Sequences in this family are members of the pfam00583 (GNAT) superfamily of acetyltransferases and are proposed to perform a N-acetylation step in the process of pseudaminic acid biosynthesis in Campylobacter species. This gene is commonly observed in apparent operons with other genes responsible for the biosynthesis of pseudaminic acid and as a component of flagellar and exopolysaccharide biosynthesis loci. Significantly, many genomes containing other components of this pathway lack this gene, indicating that some other N-acetyl transferases may be incolved and/or the step is optional, resulting in a non-acetylated pseudaminic acid variant sugar.
Probab=99.17 E-value=4.8e-10 Score=88.51 Aligned_cols=78 Identities=19% Similarity=0.301 Sum_probs=64.3
Q ss_pred CCCeEEEEEEEEeCC--CCcEEEEEEEECCCCCCCCHHHHHHHHHHHHHHh-CCCCEEEEEe---CHhhHHHHHhCCCee
Q 025840 160 EQRTLIGMARATSDH--AFNATIWDVLVDPSYQGQGLGKALVEKVVRALLQ-KDIGNISLFA---DSQVVDFYRNLGFEP 233 (247)
Q Consensus 160 ~~g~iVG~~~~~~~~--~~~~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~-~g~~~i~L~~---n~~a~~fY~k~GF~~ 233 (247)
++|++||++.+.... ...+.+. +.+.|++| +|+|++++..+++.+.+ .|+..+.+.+ |.+|++||+|+||+.
T Consensus 58 ~~g~~vG~~~~~~~~~~~~~~~~g-~~~~~~~~-~G~g~~~~~~~~~~a~~~~~~~~i~~~v~~~N~~s~~~y~k~Gf~~ 135 (156)
T TIGR03585 58 QESRPIGVISFTDINLVHKSAFWG-IYANPFCK-PGVGSVLEEAALEYAFEHLGLHKLSLEVLEFNNKALKLYEKFGFER 135 (156)
T ss_pred ECCEEEEEEEEEecChhhCeEEEE-EEeChhhh-cCchHHHHHHHHHHHHhhCCeeEEEEEEeccCHHHHHHHHHcCCeE
Confidence 389999999886533 2345664 55999999 99999999999999986 5999998874 899999999999999
Q ss_pred cCCcee
Q 025840 234 DPEGIK 239 (247)
Q Consensus 234 ~~~~~~ 239 (247)
++....
T Consensus 136 ~g~~~~ 141 (156)
T TIGR03585 136 EGVFRQ 141 (156)
T ss_pred eeeehh
Confidence 885443
No 53
>COG2153 ElaA Predicted acyltransferase [General function prediction only]
Probab=99.14 E-value=2e-10 Score=88.72 Aligned_cols=78 Identities=31% Similarity=0.395 Sum_probs=68.6
Q ss_pred CCCeEEEEEEEEeCCCCc--EEEEEEEECCCCCCCCHHHHHHHHHHHHHHhCC-CCEEEEEeCHhhHHHHHhCCCeecCC
Q 025840 160 EQRTLIGMARATSDHAFN--ATIWDVLVDPSYQGQGLGKALVEKVVRALLQKD-IGNISLFADSQVVDFYRNLGFEPDPE 236 (247)
Q Consensus 160 ~~g~iVG~~~~~~~~~~~--~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g-~~~i~L~~n~~a~~fY~k~GF~~~~~ 236 (247)
.+|++|+++++...+... ..|+.|.|.|++||+|+|+.||+.+++.+.+.. -+.+.|.+....+.||.+.||+.+++
T Consensus 57 ~~g~LvAyaRLl~~~~~~~~~~iGRV~v~~~~RG~glG~~Lm~~AL~~~~~~~p~~~v~l~AQahLq~fYa~~GFv~~~e 136 (155)
T COG2153 57 PDGELVAYARLLPPGAEYEEVSIGRVIVSPAARGQGLGQQLMEKALETAGREWPDKPVYLGAQAHLQDFYASFGFVRVGE 136 (155)
T ss_pred CCCeEEEEEecCCCCCCcCceeeeeEEECHhhhccchhHHHHHHHHHHHHhhCCCCCeEEehHHHHHHHHHHhCcEEcCc
Confidence 399999999997654433 569999999999999999999999999999874 56699999999999999999999886
Q ss_pred c
Q 025840 237 G 237 (247)
Q Consensus 237 ~ 237 (247)
.
T Consensus 137 ~ 137 (155)
T COG2153 137 E 137 (155)
T ss_pred h
Confidence 4
No 54
>COG3393 Predicted acetyltransferase [General function prediction only]
Probab=99.12 E-value=3.3e-10 Score=96.02 Aligned_cols=77 Identities=22% Similarity=0.365 Sum_probs=69.0
Q ss_pred CCCeEEEEEEEEeCCCCcEEEEEEEECCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEE--eCHhhHHHHHhCCCeecCC
Q 025840 160 EQRTLIGMARATSDHAFNATIWDVLVDPSYQGQGLGKALVEKVVRALLQKDIGNISLF--ADSQVVDFYRNLGFEPDPE 236 (247)
Q Consensus 160 ~~g~iVG~~~~~~~~~~~~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g~~~i~L~--~n~~a~~fY~k~GF~~~~~ 236 (247)
++|+||..+.........+.|..++++|+|||+|+|+.|+..+-......|.+.+... .|+.|.+.|+|.||+..++
T Consensus 184 ~d~~iVa~A~t~a~~~~~~~I~gV~T~peyR~kGyAt~lva~L~~~lL~eGk~~~L~~~~~N~~A~~iY~riGF~~~g~ 262 (268)
T COG3393 184 GDGKIVAKAETAAENPAYAQINGVYTHPEYRGKGYATALVATLAAKLLAEGKIPCLFVNSDNPVARRIYQRIGFREIGE 262 (268)
T ss_pred cCCcEEEeeeccccCCcceEEEEEEcCHHHccccHHHHHHHHHHHHHHhCCCeeEEEEecCCHHHHHHHHHhCCeecce
Confidence 4679999999887777789999999999999999999999999999999998755444 4899999999999999886
No 55
>KOG3235 consensus Subunit of the major N alpha-acetyltransferase [General function prediction only]
Probab=99.02 E-value=8.5e-10 Score=86.43 Aligned_cols=80 Identities=24% Similarity=0.392 Sum_probs=68.4
Q ss_pred CCCeEEEEEEEEeC-----CCCcEEEEEEEECCCCCCCCHHHHHHHHHHHHHHh-CCCCEEEEEe---CHhhHHHHH-hC
Q 025840 160 EQRTLIGMARATSD-----HAFNATIWDVLVDPSYQGQGLGKALVEKVVRALLQ-KDIGNISLFA---DSQVVDFYR-NL 229 (247)
Q Consensus 160 ~~g~iVG~~~~~~~-----~~~~~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~-~g~~~i~L~~---n~~a~~fY~-k~ 229 (247)
++|+|||++..... ...+++|..++|...||+.|||+.||+...+...+ .++..|.|++ |.+|+.+|+ .+
T Consensus 49 ~~gkiVGYvlAkmee~p~~~~~hGhItSlaV~rs~RrlGla~kLm~qa~rAm~E~~~A~yvsLHVR~SNraAl~LY~~tl 128 (193)
T KOG3235|consen 49 ENGKIVGYVLAKMEEDPDDEPPHGHITSLAVKRSYRRLGLAQKLMNQASRAMVEVYEAKYVSLHVRKSNRAALHLYKNTL 128 (193)
T ss_pred CCCcEEEEeeeehhhcccCCCCCCeeEEeeehhhHHHhhHHHHHHHHHHHHHHHhhcceEEEEeeecccHHHHHhhhhcc
Confidence 69999999987532 34479999999999999999999999999988877 4788899985 889999998 79
Q ss_pred CCeecCCcee
Q 025840 230 GFEPDPEGIK 239 (247)
Q Consensus 230 GF~~~~~~~~ 239 (247)
||+..+..++
T Consensus 129 ~F~v~eve~k 138 (193)
T KOG3235|consen 129 GFVVCEVEPK 138 (193)
T ss_pred ceEEeecccc
Confidence 9999876544
No 56
>KOG3138 consensus Predicted N-acetyltransferase [General function prediction only]
Probab=99.02 E-value=1.1e-09 Score=89.30 Aligned_cols=122 Identities=18% Similarity=0.175 Sum_probs=83.2
Q ss_pred EEEecCCCCCHHHHHHHHHHcCCCCCcHHHHHHHHhcceeEEEEEecccCCCCCCCCCCeEEEEEEEEeCC-CC------
Q 025840 104 IIFSSGGDVDVYELQTLCDKVGWPRRPLSKLAAALKNSYLVATLHSIRKSPGSEGNEQRTLIGMARATSDH-AF------ 176 (247)
Q Consensus 104 i~~~~~~~~d~~~l~~l~~~~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~iVG~~~~~~~~-~~------ 176 (247)
+.++..++.++..+..+.....-.......+.....+..+...... ++..||-.++.... ..
T Consensus 17 ~~l~~it~~nl~~~~~l~~~~fP~~y~~kfy~~~~~~~~~~~~A~~-----------~~~~v~a~~~k~~~~~~~~~r~~ 85 (187)
T KOG3138|consen 17 IELRLITPNNLKQLKQLNEDIFPISYVDKFYPDVLSNGDLTQLAYY-----------NEIAVGAVACKLIKFVQNAKRLF 85 (187)
T ss_pred eeeccCCcchHHHHHHHhccccCcchHHHHHHHHHhcCCHHHhhhh-----------ccccccceeeeehhhhhhhhhhh
Confidence 4455556667777777766533222233344444444332222211 45555554443221 11
Q ss_pred ---cEEEEEEEECCCCCCCCHHHHHHHHHHHHHHhCC-CCEEEEEe---CHhhHHHHHhCCCeecCC
Q 025840 177 ---NATIWDVLVDPSYQGQGLGKALVEKVVRALLQKD-IGNISLFA---DSQVVDFYRNLGFEPDPE 236 (247)
Q Consensus 177 ---~~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g-~~~i~L~~---n~~a~~fY~k~GF~~~~~ 236 (247)
..+|..++|+|.||.+|||+.|++++.+.+.... +..+.|++ |..|+.||++.||+.+..
T Consensus 86 ~~~~~yi~~Lgvl~~yR~~gIGs~Ll~~~~~~~~~~~~~~~v~lHv~~~n~~ai~~Y~~~gF~~~~~ 152 (187)
T KOG3138|consen 86 GNRVIYILSLGVLPRYRNKGIGSKLLEFVKKYCSEAHQCRRVYLHVQAVNESAIEFYEKRGFEIVER 152 (187)
T ss_pred ccceeEEEeecccHHHHhcchHHHHHHHHHHHHhcccccceEEEEEEeCCCcHHHHHHhcCceEeec
Confidence 3889999999999999999999999999999887 78888884 889999999999999875
No 57
>TIGR01211 ELP3 histone acetyltransferase, ELP3 family. The Saccharomyces cerevisiae member YPL086C has been characterized in vitro as an N-terminal acetyltransferase for all four core histones. It is a component of the RNA polymerase II holoenzyme, designated Elp3p for Elongator Protein 3. Members of this family are found in eukaryotes and archaea. These proteins are part of the larger set of GNAT acetyltransferases.
Probab=99.01 E-value=1.6e-09 Score=101.76 Aligned_cols=79 Identities=27% Similarity=0.440 Sum_probs=67.4
Q ss_pred CCCeEEEEEEEEeCCC--------CcEEEEEEEE-----------CCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEeCH
Q 025840 160 EQRTLIGMARATSDHA--------FNATIWDVLV-----------DPSYQGQGLGKALVEKVVRALLQKDIGNISLFADS 220 (247)
Q Consensus 160 ~~g~iVG~~~~~~~~~--------~~~~I~~l~V-----------~p~~Rg~GlG~~Ll~~~~~~a~~~g~~~i~L~~n~ 220 (247)
+++.+||++.+..... ..+.|..+.| +++|||+|+|+.||+++++.+++.|+..++|.+|.
T Consensus 421 ~~~~l~G~lrlr~~~~~~~~~~~~~~a~IrelhV~G~~~~~~~~~~~~~rg~GiG~~Ll~~ae~~Ar~~G~~~i~v~s~~ 500 (522)
T TIGR01211 421 KNDILIGFLRLRFPSEPAHRKEVDATALVRELHVYGSEVPIGERGDDEWQHRGYGRRLLEEAERIAAEEGSEKILVISGI 500 (522)
T ss_pred CCCeEEEEEEEecCcccccccccCCCceEEEEEEeeeeccccccCChhHhCcCHHHHHHHHHHHHHHHCCCCEEEEeeCc
Confidence 4679999999875432 2466666664 49999999999999999999999999999999999
Q ss_pred hhHHHHHhCCCeecCCce
Q 025840 221 QVVDFYRNLGFEPDPEGI 238 (247)
Q Consensus 221 ~a~~fY~k~GF~~~~~~~ 238 (247)
.|++||+|+||+..++..
T Consensus 501 ~A~~FY~klGf~~~g~ym 518 (522)
T TIGR01211 501 GVREYYRKLGYELDGPYM 518 (522)
T ss_pred hHHHHHHHCCCEEEccee
Confidence 999999999999987643
No 58
>PF12568 DUF3749: Acetyltransferase (GNAT) domain; InterPro: IPR024612 This domain is found in uncharacterised proteins from Gammaproteobacteria, and is approximately 40 amino acids in length. It contains two completely conserved residues (D and I) that may be functionally important. Proteins having this domain are frequently annotated as acetyltransferases of the GNAT family; however there is little accompanying annotation to confirm this.; PDB: 2K5T_A.
Probab=98.97 E-value=3.2e-08 Score=75.42 Aligned_cols=112 Identities=22% Similarity=0.349 Sum_probs=68.4
Q ss_pred CCCHHHHHHHHHHcCCCCCcHHHHHHHHhcceeEEEEEecccCCCCCCCCCCeEEEEEEEEeCCCCcEEEEEEEECCCCC
Q 025840 111 DVDVYELQTLCDKVGWPRRPLSKLAAALKNSYLVATLHSIRKSPGSEGNEQRTLIGMARATSDHAFNATIWDVLVDPSYQ 190 (247)
Q Consensus 111 ~~d~~~l~~l~~~~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~iVG~~~~~~~~~~~~~I~~l~V~p~~R 190 (247)
..+..+..++.+ -||..+.+.+.+.+++...+.+... |++++|.+.+..++. .+.|.+++|++.-|
T Consensus 9 ~ls~Qd~iDL~K--Iwp~~~~~~l~~~l~~~~~l~aArF-----------NdRlLgAv~v~~~~~-~~~L~~l~VRevTR 74 (128)
T PF12568_consen 9 TLSEQDRIDLAK--IWPQQDPEQLEQWLDEGHRLFAARF-----------NDRLLGAVKVTISGQ-QAELSDLCVREVTR 74 (128)
T ss_dssp S--HHHHHHHHH--H-TTS----------SSEEEEEEEE-----------TTEEEEEEEEEEETT-EEEEEEEEE-TT-S
T ss_pred CCCHHHHHHHHH--hCCCCCHHHHHHHhccCCeEEEEEe-----------chheeeeEEEEEcCc-ceEEeeEEEeeccc
Confidence 334455555544 3577777788877776544444333 999999999987544 89999999999999
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCEEEEEeC-------HhhHHHHHhCCCeecCCce
Q 025840 191 GQGLGKALVEKVVRALLQKDIGNISLFAD-------SQVVDFYRNLGFEPDPEGI 238 (247)
Q Consensus 191 g~GlG~~Ll~~~~~~a~~~g~~~i~L~~n-------~~a~~fY~k~GF~~~~~~~ 238 (247)
|+|+|+.|++.+.+++ .+++..++..+ .....|.+.+||.....++
T Consensus 75 rRGVG~yLlee~~rq~--p~i~~w~l~~~~~~~~~~~~~~~Fm~a~GF~~~~~~W 127 (128)
T PF12568_consen 75 RRGVGLYLLEEVLRQL--PDIKHWWLADEGVEPQDRAVMAAFMQACGFSAQSDGW 127 (128)
T ss_dssp SSSHHHHHHHHHHHHS---S--EEEE--TT-S--THHHHHHHHHHHT-EE-SSSE
T ss_pred cccHHHHHHHHHHHHC--CCCcEEEEecCCCcccchHHHHHHHHHcCccccCCCC
Confidence 9999999999999998 45677777642 3367888999998877654
No 59
>KOG3397 consensus Acetyltransferases [General function prediction only]
Probab=98.87 E-value=2.7e-08 Score=79.15 Aligned_cols=77 Identities=23% Similarity=0.400 Sum_probs=65.9
Q ss_pred CCCCeEEEEEEEEe--CCCCcEEEEEEEECCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEeCHhhHHHHHhCCCeecCC
Q 025840 159 NEQRTLIGMARATS--DHAFNATIWDVLVDPSYQGQGLGKALVEKVVRALLQKDIGNISLFADSQVVDFYRNLGFEPDPE 236 (247)
Q Consensus 159 ~~~g~iVG~~~~~~--~~~~~~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g~~~i~L~~n~~a~~fY~k~GF~~~~~ 236 (247)
+...++||...+.. ......++..|.|+.++||+|+|+.||+.++.+|+..|...++|.+.. -.+||+++||+..+.
T Consensus 63 E~~~~VigH~rLS~i~n~~~al~VEsVVV~k~~RG~GFGk~lMk~~E~~~R~~gf~~~yLsT~D-Q~~FYe~lGYe~c~P 141 (225)
T KOG3397|consen 63 EENDEVLGHSRLSHLPNRDHALWVESVVVKKDQRGLGFGKFLMKSTEKWMREKGFNEAYLSTDD-QCRFYESLGYEKCDP 141 (225)
T ss_pred ccccceeeeeccccCCCCCceeEEEEEEEehhhccccHHHHHHHHHHHHHHHhhhhheeeeccc-chhhhhhhcccccCc
Confidence 45788999998753 234457899999999999999999999999999999999999998744 369999999998654
No 60
>cd04301 NAT_SF N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate. NAT (N-Acyltransferase) is a large superfamily of enzymes that mostly catalyze the transfer of an acyl group to a substrate and are implicated in a variety of functions, ranging from bacterial antibiotic resistance to circadian rhythms in mammals. Members include GCN5-related N-Acetyltransferases (GNAT) such as Aminoglycoside N-acetyltransferases, Histone N-acetyltransferase (HAT) enzymes, and Serotonin N-acetyltransferase, which catalyze the transfer of an acetyl group to a substrate. The kinetic mechanism of most GNATs involves the ordered formation of a ternary complex: the reaction begins with Acetyl Coenzyme A (AcCoA) binding, followed by binding of substrate, then direct transfer of the acetyl group from AcCoA to the substrate, followed by product and subsequent CoA release. Other family members include Arginine/ornithine N-succinyltransfera
Probab=98.82 E-value=2.2e-08 Score=65.44 Aligned_cols=57 Identities=28% Similarity=0.480 Sum_probs=51.0
Q ss_pred CCCeEEEEEEEEeCC--CCcEEEEEEEECCCCCCCCHHHHHHHHHHHHHHhCCCCEEEE
Q 025840 160 EQRTLIGMARATSDH--AFNATIWDVLVDPSYQGQGLGKALVEKVVRALLQKDIGNISL 216 (247)
Q Consensus 160 ~~g~iVG~~~~~~~~--~~~~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g~~~i~L 216 (247)
+++++||++.+.... ...+++..++|+|+|||+|+|+.++..+++.+.+.|.+.+.+
T Consensus 6 ~~~~~ig~~~~~~~~~~~~~~~l~~~~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~ 64 (65)
T cd04301 6 DDGEIVGFASLSPDGSGGDTAYIGDLAVLPEYRGKGIGSALLEAAEEEARERGAKRLRL 64 (65)
T ss_pred cCCEEEEEEEEEecCCCCccEEEEEEEECHHHcCcCHHHHHHHHHHHHHHHcCCcEEEe
Confidence 478999999987654 457899999999999999999999999999999999888876
No 61
>COG1670 RimL Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis]
Probab=98.75 E-value=6.5e-08 Score=77.71 Aligned_cols=77 Identities=21% Similarity=0.310 Sum_probs=64.7
Q ss_pred CCeEEEEEEEEeCC----CCcEEEEEEEECCCCCCCCHHHHHHHHHHHHHHh-CCCCEEEEEe---CHhhHHHHHhCCCe
Q 025840 161 QRTLIGMARATSDH----AFNATIWDVLVDPSYQGQGLGKALVEKVVRALLQ-KDIGNISLFA---DSQVVDFYRNLGFE 232 (247)
Q Consensus 161 ~g~iVG~~~~~~~~----~~~~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~-~g~~~i~L~~---n~~a~~fY~k~GF~ 232 (247)
++++||.+.+.... ...++|. ..+.|+|+|+|+|+..+..+++++.. .|+.++.+.+ |.+++++++|+||+
T Consensus 76 ~~~~iG~~~~~~~~~~~~~~~~~ig-~~l~~~~~g~G~~tea~~~~l~~~f~~~~l~ri~~~~~~~N~~S~rv~ek~Gf~ 154 (187)
T COG1670 76 DGELIGVIGLSDIDRAANGDLAEIG-YWLDPEYWGKGYATEALRALLDYAFEELGLHRIEATVDPENEASIRVYEKLGFR 154 (187)
T ss_pred CCeEEEEEEEEEeccccccceEEEE-EEEChHHhcCchHHHHHHHHHHHhhhhcCceEEEEEecCCCHHHHHHHHHcCCh
Confidence 45999999986433 4456664 55699999999999999999999988 6999998886 89999999999999
Q ss_pred ecCCce
Q 025840 233 PDPEGI 238 (247)
Q Consensus 233 ~~~~~~ 238 (247)
..+...
T Consensus 155 ~eg~~~ 160 (187)
T COG1670 155 LEGELR 160 (187)
T ss_pred hhhhhh
Confidence 988533
No 62
>KOG3234 consensus Acetyltransferase, (GNAT) family [General function prediction only]
Probab=98.72 E-value=6.7e-08 Score=75.77 Aligned_cols=76 Identities=17% Similarity=0.364 Sum_probs=65.4
Q ss_pred CCCeEEEEEEEEeCCC---CcEEEEEEEECCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEe---CHhhHHHHHhCCCee
Q 025840 160 EQRTLIGMARATSDHA---FNATIWDVLVDPSYQGQGLGKALVEKVVRALLQKDIGNISLFA---DSQVVDFYRNLGFEP 233 (247)
Q Consensus 160 ~~g~iVG~~~~~~~~~---~~~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g~~~i~L~~---n~~a~~fY~k~GF~~ 233 (247)
.+++|-|++.....+. -+++++.+.|.|+||+.|+|+.||+.+.+.....+.--+.|.+ |+-|+.||+++||..
T Consensus 49 p~~~imgyimgk~Eg~~~~wh~HvTAltVap~~Rrl~la~~lm~~led~~d~~~a~fvDLfVr~sN~iAI~mYkkLGY~~ 128 (173)
T KOG3234|consen 49 PTGEIMGYIMGKVEGKDTEWHGHVTALTVAPDYRRLGLAAKLMDTLEDVSDVDNAYFVDLFVRVSNQIAIDMYKKLGYSV 128 (173)
T ss_pred CCCceEEEEeeeccccCcceeeEEEEEEechhHHHHHHHHHHHHHHHHHHHhhhhheeeeeeeccchhHHHHHHhcCceE
Confidence 4789999998865443 3589999999999999999999999999998887777777775 888999999999998
Q ss_pred cC
Q 025840 234 DP 235 (247)
Q Consensus 234 ~~ 235 (247)
..
T Consensus 129 YR 130 (173)
T KOG3234|consen 129 YR 130 (173)
T ss_pred EE
Confidence 54
No 63
>PF08444 Gly_acyl_tr_C: Aralkyl acyl-CoA:amino acid N-acyltransferase, C-terminal region; InterPro: IPR013652 This entry represents mammalian-specific glycine N-acyltransferase (also called aralkyl acyl-CoA:amino acid N-acyltransferase; 2.3.1.13 from EC). Mitochondrial acyltransferases catalyse the transfer of an acyl group from acyl-CoA to the N terminus of glycine to produce N-acylglycine. These enzymes can conjugate a multitude of substrates to form a variety of N-acylglycines. The CoA derivatives of a number of aliphatic and aromatic acids, but not phenylacetyl-CoA or (indol-3-yl)acetyl-CoA, can act as donor [, ].
Probab=98.64 E-value=1.9e-07 Score=66.91 Aligned_cols=82 Identities=16% Similarity=0.179 Sum_probs=70.3
Q ss_pred CCCCeEEEEEEEEeCCCCcEEEEEEEECCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEe---CHhhHHHHHhCCCeecC
Q 025840 159 NEQRTLIGMARATSDHAFNATIWDVLVDPSYQGQGLGKALVEKVVRALLQKDIGNISLFA---DSQVVDFYRNLGFEPDP 235 (247)
Q Consensus 159 ~~~g~iVG~~~~~~~~~~~~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g~~~i~L~~---n~~a~~fY~k~GF~~~~ 235 (247)
+.+|++|..+.+.. .+++..-++.|+|||||+.+.++...++.+.++|+. +...+ |..++++-+++||....
T Consensus 5 gpeG~PVSW~lmdq----tge~rmgyTlPeyR~~G~~~~v~~~~~~~L~~~g~P-~Y~hv~~~N~~~~r~~~~lg~~~~p 79 (89)
T PF08444_consen 5 GPEGNPVSWSLMDQ----TGEMRMGYTLPEYRGQGLMSQVMYHLAQYLHKLGFP-FYGHVDEDNEASQRLSKSLGFIFMP 79 (89)
T ss_pred CCCCCEeEEEEecc----cccccccccCHhHhcCCHHHHHHHHHHHHHHHCCCC-eEeehHhccHHHHHHHHHCCCeecC
Confidence 46899999988853 478999999999999999999999999999999987 66664 89999999999999998
Q ss_pred CceeeeEecC
Q 025840 236 EGIKGMFWHP 245 (247)
Q Consensus 236 ~~~~~~~w~~ 245 (247)
-++..-..+|
T Consensus 80 c~w~qW~c~P 89 (89)
T PF08444_consen 80 CGWHQWNCVP 89 (89)
T ss_pred CcchhceeeC
Confidence 7776555443
No 64
>PF13718 GNAT_acetyltr_2: GNAT acetyltransferase 2; PDB: 2ZPA_B.
Probab=98.54 E-value=2.2e-06 Score=70.75 Aligned_cols=58 Identities=22% Similarity=0.391 Sum_probs=43.4
Q ss_pred EEEEEEEECCCCCCCCHHHHHHHHHHHHH-------------------------HhCCCCEEEEE--eCHhhHHHHHhCC
Q 025840 178 ATIWDVLVDPSYQGQGLGKALVEKVVRAL-------------------------LQKDIGNISLF--ADSQVVDFYRNLG 230 (247)
Q Consensus 178 ~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a-------------------------~~~g~~~i~L~--~n~~a~~fY~k~G 230 (247)
..|..|+|||++|++|+|+++++.+++++ +..+++.+... .++...+|+.|+|
T Consensus 91 ~RIvRIAvhP~~q~~G~Gs~lL~~l~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~vDylGtSFG~t~~Ll~FW~k~g 170 (196)
T PF13718_consen 91 ARIVRIAVHPDLQRMGYGSRLLQQLEQYAEGKIPSLSEQDKEKLPPLLSKLSDRRPPGVDYLGTSFGATPELLKFWQKNG 170 (196)
T ss_dssp EEEEEEEE-CCC-SSSHHHHHHHHHHHT-----------------------------S-SEEEEEEE--HHHHHHHHCTT
T ss_pred eeEEEEEEChhhhcCCHHHHHHHHHHHHHhhhcccccccccccccccccccccccccCCCEEEeccCCCHHHHHHHHHCC
Confidence 67889999999999999999999999999 45677766655 4888999999999
Q ss_pred CeecC
Q 025840 231 FEPDP 235 (247)
Q Consensus 231 F~~~~ 235 (247)
|+++.
T Consensus 171 f~pv~ 175 (196)
T PF13718_consen 171 FVPVY 175 (196)
T ss_dssp -EEEE
T ss_pred cEEEE
Confidence 99864
No 65
>KOG4144 consensus Arylalkylamine N-acetyltransferase [General function prediction only]
Probab=98.47 E-value=1.4e-07 Score=73.82 Aligned_cols=77 Identities=23% Similarity=0.393 Sum_probs=63.4
Q ss_pred CCCeEEEEEEEE---------------eCCCCcEEEEEEEECCCCCCCCHHHHHHHHHHHHHHhCCC-CEEEEEeCHhhH
Q 025840 160 EQRTLIGMARAT---------------SDHAFNATIWDVLVDPSYQGQGLGKALVEKVVRALLQKDI-GNISLFADSQVV 223 (247)
Q Consensus 160 ~~g~iVG~~~~~---------------~~~~~~~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g~-~~i~L~~n~~a~ 223 (247)
..|.+||++... ..++.+..|..++|+|+||.+|+|+.|+...++..-++.+ .++.|-+..+.+
T Consensus 69 ~~~tLIghIigs~~~~E~lt~ESm~kh~s~g~ni~iHsl~Ihpa~rk~g~a~~Ll~~ylq~l~~q~i~~r~~Li~h~pLv 148 (190)
T KOG4144|consen 69 CEGTLIGHIIGSLWDKERLTQESMTKHRSGGHNIHIHSLAIHPAFRKQGRAPILLWRYLQHLGSQPIVRRAALICHDPLV 148 (190)
T ss_pred ccccceehhhcccCcchhhhHHHHhhhhcCCcceeEEEEEecHHHHhcCcchhHHHHHHHHhhcCccccceeeeecCCcc
Confidence 378899988652 1134468999999999999999999999998888877643 467788899999
Q ss_pred HHHHhCCCeecCC
Q 025840 224 DFYRNLGFEPDPE 236 (247)
Q Consensus 224 ~fY~k~GF~~~~~ 236 (247)
.||+++||+.+++
T Consensus 149 PFYEr~gFk~vgp 161 (190)
T KOG4144|consen 149 PFYERFGFKAVGP 161 (190)
T ss_pred chhHhcCceeecc
Confidence 9999999999886
No 66
>PF14542 Acetyltransf_CG: GCN5-related N-acetyl-transferase; PDB: 2H5M_A 2Q44_A 1XMT_A 2Q4Y_A 2IL4_A 2EVN_A 1R57_A.
Probab=98.43 E-value=1.9e-06 Score=60.85 Aligned_cols=66 Identities=21% Similarity=0.254 Sum_probs=51.6
Q ss_pred CCCeEEEEEEEEeCCCCcEEEEEEEECCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEeCHhhHHHHHh
Q 025840 160 EQRTLIGMARATSDHAFNATIWDVLVDPSYQGQGLGKALVEKVVRALLQKDIGNISLFADSQVVDFYRN 228 (247)
Q Consensus 160 ~~g~iVG~~~~~~~~~~~~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g~~~i~L~~n~~a~~fY~k 228 (247)
++|+.+|++.... .+....|....|.|++||||+|+.|++.+++.++++|.+-+ . +-+-+.+++++
T Consensus 6 ~~g~~~a~l~Y~~-~~~~~~i~hT~V~~~~rGqGia~~L~~~~l~~a~~~~~kv~-p-~C~y~~~~~~~ 71 (78)
T PF14542_consen 6 DDGEEIAELTYRE-DGGVIVITHTEVPPELRGQGIAKKLVEAALDYARENGLKVV-P-TCSYVAKYFRR 71 (78)
T ss_dssp SSTTEEEEEEEEE-SSSEEEEEEEEE-CSSSTTTHHHHHHHHHHHHHHHTT-EEE-E-TSHHHHHHHHH
T ss_pred ECCEEEEEEEEEe-CCCEEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCEEE-E-ECHHHHHHHHh
Confidence 4788999999876 55578899999999999999999999999999999997633 2 23445555554
No 67
>COG3981 Predicted acetyltransferase [General function prediction only]
Probab=98.39 E-value=7.5e-07 Score=71.11 Aligned_cols=76 Identities=14% Similarity=0.164 Sum_probs=63.5
Q ss_pred CCCeEEEEEEEEeCCC-----CcEEEEEEEECCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEe---CHhhHHHHHhCCC
Q 025840 160 EQRTLIGMARATSDHA-----FNATIWDVLVDPSYQGQGLGKALVEKVVRALLQKDIGNISLFA---DSQVVDFYRNLGF 231 (247)
Q Consensus 160 ~~g~iVG~~~~~~~~~-----~~~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g~~~i~L~~---n~~a~~fY~k~GF 231 (247)
+++++||++.+...-+ .-++| .-.|+|..||+|+|+++++.+++.|++.|++.|.+++ |.++.+.-+++|=
T Consensus 76 ~d~~ivG~i~lRh~Ln~~ll~~gGHI-GY~VrPseR~KGYA~emLkl~L~~ar~lgi~~Vlvtcd~dN~ASrkvI~~NGG 154 (174)
T COG3981 76 EDGQIVGFINLRHQLNDFLLEEGGHI-GYSVRPSERRKGYAKEMLKLALEKARELGIKKVLVTCDKDNIASRKVIEANGG 154 (174)
T ss_pred cCCcEEEEEEeeeecchHHHhcCCcc-cceeChhhhccCHHHHHHHHHHHHHHHcCCCeEEEEeCCCCchhhHHHHhcCC
Confidence 4899999998853211 13577 4789999999999999999999999999999999986 7889999999996
Q ss_pred eecCC
Q 025840 232 EPDPE 236 (247)
Q Consensus 232 ~~~~~ 236 (247)
..+.+
T Consensus 155 ile~~ 159 (174)
T COG3981 155 ILENE 159 (174)
T ss_pred EEeEE
Confidence 66543
No 68
>COG3053 CitC Citrate lyase synthetase [Energy production and conversion]
Probab=98.27 E-value=1.1e-05 Score=69.61 Aligned_cols=79 Identities=16% Similarity=0.316 Sum_probs=69.2
Q ss_pred CCCeEEEEEEEEeCCCCcEEEEEEEECCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEeCHhhHHHHHhCCCeecCCcee
Q 025840 160 EQRTLIGMARATSDHAFNATIWDVLVDPSYQGQGLGKALVEKVVRALLQKDIGNISLFADSQVVDFYRNLGFEPDPEGIK 239 (247)
Q Consensus 160 ~~g~iVG~~~~~~~~~~~~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g~~~i~L~~n~~a~~fY~k~GF~~~~~~~~ 239 (247)
++++||+++.+.. --|..++|++.+||-|++-.|+.++++.+.++|...+.+.+.+....||+.+||.....-..
T Consensus 44 ~~~~iiacGsiaG-----nvikcvAvs~s~qGeGl~lkl~TeLin~ay~~g~~hLFiyTKp~~~~lFk~~GF~~i~~~~~ 118 (352)
T COG3053 44 DNEEIIACGSIAG-----NVIKCVAVSESLQGEGLALKLVTELINLAYERGRTHLFIYTKPEYAALFKQCGFSEIASAEN 118 (352)
T ss_pred CCCcEEEeccccc-----ceeEEEEechhcccccHHHHHHHHHHHHHHHcCCceEEEEechhHHHHHHhCCceEeeccCc
Confidence 4799999987742 25889999999999999999999999999999999999999999999999999998776555
Q ss_pred eeEe
Q 025840 240 GMFW 243 (247)
Q Consensus 240 ~~~w 243 (247)
.+..
T Consensus 119 ~ivl 122 (352)
T COG3053 119 VIVL 122 (352)
T ss_pred eEEE
Confidence 5443
No 69
>COG3818 Predicted acetyltransferase, GNAT superfamily [General function prediction only]
Probab=98.27 E-value=8.2e-06 Score=62.26 Aligned_cols=62 Identities=16% Similarity=0.143 Sum_probs=56.8
Q ss_pred CCcEEEEEEEECCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEe-----CHhhHHHHHhCCCeecCC
Q 025840 175 AFNATIWDVLVDPSYQGQGLGKALVEKVVRALLQKDIGNISLFA-----DSQVVDFYRNLGFEPDPE 236 (247)
Q Consensus 175 ~~~~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g~~~i~L~~-----n~~a~~fY~k~GF~~~~~ 236 (247)
....||..|.|....||+|+|++|-..+.++++..|...+++++ |+++..|-..+||..+|+
T Consensus 82 e~F~YvDRvVVA~~aRGrG~aRalY~Dlf~~Ae~agy~~~tCEVn~DppnpasdaFHaalGF~eVG~ 148 (167)
T COG3818 82 ENFFYVDRVVVASRARGRGVARALYADLFSYAELAGYPYLTCEVNLDPPNPASDAFHAALGFHEVGQ 148 (167)
T ss_pred CceEEEEEEEEEecccccchHHHHHHHHHHHHHhcCCceEEEEecCCCCChHHHHHhhhcCceEccc
Confidence 34589999999999999999999999999999999999998886 677999999999999986
No 70
>COG2388 Predicted acetyltransferase [General function prediction only]
Probab=98.06 E-value=8.2e-06 Score=59.98 Aligned_cols=59 Identities=24% Similarity=0.275 Sum_probs=53.1
Q ss_pred CCCeEEEEEEEEeCCCCcEEEEEEEECCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEe
Q 025840 160 EQRTLIGMARATSDHAFNATIWDVLVDPSYQGQGLGKALVEKVVRALLQKDIGNISLFA 218 (247)
Q Consensus 160 ~~g~iVG~~~~~~~~~~~~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g~~~i~L~~ 218 (247)
++|+.+|.+.....+.....|..-+|.+++||||+|+.|+.++++.+++.|.+.+=+|.
T Consensus 22 ~~G~~~~e~~y~~~~~~~i~i~HT~V~d~lrGqGia~~L~~~al~~ar~~g~kiiP~Cs 80 (99)
T COG2388 22 DEGEVIGEATYYDRGENLIIIDHTYVPDELRGQGIAQKLVEKALEEAREAGLKIIPLCS 80 (99)
T ss_pred cCCcEEEEEEEecCCCCEEEEecCcCCHHHcCCcHHHHHHHHHHHHHHHcCCeEcccch
Confidence 58999999988777777899999999999999999999999999999999988666665
No 71
>COG0454 WecD Histone acetyltransferase HPA2 and related acetyltransferases [Transcription / General function prediction only]
Probab=98.02 E-value=1.3e-05 Score=57.11 Aligned_cols=44 Identities=30% Similarity=0.617 Sum_probs=41.1
Q ss_pred EEECCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEeCHhhHHHHHhCCC
Q 025840 183 VLVDPSYQGQGLGKALVEKVVRALLQKDIGNISLFADSQVVDFYRNLGF 231 (247)
Q Consensus 183 l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g~~~i~L~~n~~a~~fY~k~GF 231 (247)
++|+|+|||+|+|+.|++++++.+...|+. .+..+..+|++.||
T Consensus 87 l~v~~~~rg~Gig~~Ll~~~~~~~~~~g~~-----~~~~~~~~~~~~~~ 130 (156)
T COG0454 87 LYVLPEYRGKGIGSALLEAALEWARKRGIS-----LNRLALEVYEKNGF 130 (156)
T ss_pred EEecchhhccchHHHHHHHHHHHHHHcCce-----ehHHHHHHHHhcCC
Confidence 999999999999999999999999998766 67889999999998
No 72
>COG1444 Predicted P-loop ATPase fused to an acetyltransferase [General function prediction only]
Probab=97.98 E-value=1.2e-05 Score=78.11 Aligned_cols=58 Identities=21% Similarity=0.341 Sum_probs=50.8
Q ss_pred EEEEEEEECCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEE--eCHhhHHHHHhCCCeecCC
Q 025840 178 ATIWDVLVDPSYQGQGLGKALVEKVVRALLQKDIGNISLF--ADSQVVDFYRNLGFEPDPE 236 (247)
Q Consensus 178 ~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g~~~i~L~--~n~~a~~fY~k~GF~~~~~ 236 (247)
..|..|+|||++|++|||++|++.+.+++. .|++.+... .++...+|+.|+||.++.-
T Consensus 532 ~RIvRIAvhPe~q~~GiGsrlL~~l~~~a~-~~~DwlgvsFG~t~~L~rFW~rnGF~pVhl 591 (758)
T COG1444 532 WRIVRIAVHPELQRMGIGSRLLALLIEEAR-KGLDWLGVSFGYTEELLRFWLRNGFVPVHL 591 (758)
T ss_pred eeEEEEEeCHHHHhcCHHHHHHHHHHHHHh-cCCCEEeeccCCCHHHHHHHHHcCeEEEEe
Confidence 568899999999999999999999999997 566666555 5899999999999999763
No 73
>COG4552 Eis Predicted acetyltransferase involved in intracellular survival and related acetyltransferases [General function prediction only]
Probab=97.87 E-value=2.2e-05 Score=69.41 Aligned_cols=74 Identities=22% Similarity=0.295 Sum_probs=60.7
Q ss_pred CCeEEEEEEEE-----eCC--CCcEEEEEEEECCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEeCHhhHHHHHhCCCee
Q 025840 161 QRTLIGMARAT-----SDH--AFNATIWDVLVDPSYQGQGLGKALVEKVVRALLQKDIGNISLFADSQVVDFYRNLGFEP 233 (247)
Q Consensus 161 ~g~iVG~~~~~-----~~~--~~~~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g~~~i~L~~n~~a~~fY~k~GF~~ 233 (247)
+.++++..... ..+ -..+.|..|++.|+|||+|..++|+.+.++..+++|.....| .+...+||+|.||+.
T Consensus 47 nqkl~s~L~i~~f~~~f~~q~l~t~GIa~Vas~P~~R~~G~~~~Ll~~sLre~~~kG~p~s~L--~P~s~~iYrKfGye~ 124 (389)
T COG4552 47 NQKLASRLHIPPFIFWFGNQVLPTAGIAGVASAPTYRRRGALRALLAHSLREIARKGYPVSAL--HPFSGGIYRKFGYEY 124 (389)
T ss_pred hhhhhhcccccchheeeCCeeeeccceEEEEechhhccCcHHHHHHHHHHHHHHHcCCeeEEe--ccCchhhHhhccccc
Confidence 77888876542 111 124789999999999999999999999999999999987777 556679999999998
Q ss_pred cCC
Q 025840 234 DPE 236 (247)
Q Consensus 234 ~~~ 236 (247)
...
T Consensus 125 asn 127 (389)
T COG4552 125 ASN 127 (389)
T ss_pred cce
Confidence 654
No 74
>PF06852 DUF1248: Protein of unknown function (DUF1248); InterPro: IPR009658 This entry represents a conserved region within a number of proteins of unknown function that seem to be specific to Caenorhabditis elegans. Note that some proteins in the entry contain more than one copy of this region.
Probab=97.85 E-value=0.001 Score=54.33 Aligned_cols=113 Identities=18% Similarity=0.264 Sum_probs=76.1
Q ss_pred CHHHHHHHHHHcCCCC--CcHHHHHHHHhc-ceeEEEEEecccCCCCCCCCCCeEEEEEEEEe-C------CCCcEEEEE
Q 025840 113 DVYELQTLCDKVGWPR--RPLSKLAAALKN-SYLVATLHSIRKSPGSEGNEQRTLIGMARATS-D------HAFNATIWD 182 (247)
Q Consensus 113 d~~~l~~l~~~~~w~~--~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~g~iVG~~~~~~-~------~~~~~~I~~ 182 (247)
.++++..+.....|.- .+...|...+++ .+++++.. ....++|+.+.+.. + ......++.
T Consensus 14 ~~d~fmk~~g~~r~~Fk~~Di~~wk~sf~~~Y~l~~~~~----------KgT~~via~~~~~~~~~l~~~~d~pl~~~G~ 83 (181)
T PF06852_consen 14 YFDQFMKLHGNERWNFKRNDIKLWKESFDDDYWLVLTCL----------KGTDRVIATVHLIRFDPLNPSPDKPLQFIGF 83 (181)
T ss_pred HHHHHHHHhcCCcccccHHHHHHHHHhhccCeEEEEEEE----------cCCCcEEEEEEEEEeccCCCCCCCCeEEEee
Confidence 4555666655544443 456688888887 44444432 23567888776531 1 234688999
Q ss_pred EEECCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEeCHhhHHHHHh-CCCeecCC
Q 025840 183 VLVDPSYQGQGLGKALVEKVVRALLQKDIGNISLFADSQVVDFYRN-LGFEPDPE 236 (247)
Q Consensus 183 l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g~~~i~L~~n~~a~~fY~k-~GF~~~~~ 236 (247)
..++|+|||+|+++ |+..+.......+...+.++.+..+.++|.+ +||...+.
T Consensus 84 ~w~~p~yRg~~~~k-l~~~~~~~~~~~~~~N~~~~~~~~~~~~w~k~~G~~~~~h 137 (181)
T PF06852_consen 84 FWIDPEYRGKGIMK-LQDDICMDELDSVDDNSVAQGNVKMSNFWHKMFGFDDYGH 137 (181)
T ss_pred eeeCCcccCcchHH-HHHHHHHHHhccCCCceeeecCHHHHHHHHHHhCCCCCcc
Confidence 99999999999996 5555544433334566777889999999976 99888776
No 75
>KOG4135 consensus Predicted phosphoglucosamine acetyltransferase [Carbohydrate transport and metabolism]
Probab=97.35 E-value=0.00065 Score=53.14 Aligned_cols=60 Identities=10% Similarity=0.239 Sum_probs=50.4
Q ss_pred cEEEEEEEECCCCCCCCHHHHHHHHHHHHHHhC-CCCEEEEEe---CHhhHHHHHhCCCeecCC
Q 025840 177 NATIWDVLVDPSYQGQGLGKALVEKVVRALLQK-DIGNISLFA---DSQVVDFYRNLGFEPDPE 236 (247)
Q Consensus 177 ~~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~-g~~~i~L~~---n~~a~~fY~k~GF~~~~~ 236 (247)
.+++.-+--.|.-||+|+|+..+..++.++.+. ++..-.+.. |.++++||+|++|+.+..
T Consensus 107 ~gE~EvMIAEP~~RgKG~G~eav~~ml~y~~s~l~l~Ky~vkig~~nk~sl~lFkk~~f~q~~~ 170 (185)
T KOG4135|consen 107 TGEVEVMIAEPRGRGKGIGTEAVRAMLAYAYSVLKLDKYEVKIGMDNKPSLRLFKKFLFTQVFY 170 (185)
T ss_pred eeeEEEEEecccccCCCccHHHHHHHHHHHHHHhhhheEEEEecCCCchHHHHHHHhhheeeee
Confidence 467777888999999999999999999999874 666555554 889999999999998653
No 76
>PF01233 NMT: Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain; InterPro: IPR022676 Myristoyl-CoA:protein N-myristoyltransferase (2.3.1.97 from EC) (Nmt) [] is the enzyme responsible for transferring a myristate group on the N-terminal glycine of a number of cellular eukaryotics and viral proteins. Nmt is a monomeric protein of about 50 to 60kDa whose sequence appears to be well conserved. The N and C-terminal domains of NMT are structurally similar, each adopting an acyl-CoA N-acyltransferase-like fold. This entry represents the N-terminal region. ; GO: 0004379 glycylpeptide N-tetradecanoyltransferase activity; PDB: 2P6G_B 2P6F_F 2P6E_A 1IIC_A 1IID_A 2NMT_A 4A33_A 3H5Z_A 4A2Z_A 2WSA_A ....
Probab=97.22 E-value=0.011 Score=46.99 Aligned_cols=112 Identities=19% Similarity=0.197 Sum_probs=68.5
Q ss_pred cCCCCCceEEeeccCCCCceeEEEEecCCCCCHHHHHHHHHHcCCCC--------CcHHHHHHHHhc-----ceeEEEEE
Q 025840 82 EEPMPEEFVLIEKTQPDGVIEQIIFSSGGDVDVYELQTLCDKVGWPR--------RPLSKLAAALKN-----SYLVATLH 148 (247)
Q Consensus 82 ~~~lp~~~~l~~~~~~~~~~~~i~~~~~~~~d~~~l~~l~~~~~w~~--------~~~~~~~~~~~~-----~~~v~~~~ 148 (247)
+.+||+||........+ +.+..++.++..+.+-.+ .+.+-+.-++.. .+.+++-.
T Consensus 17 p~~LP~gF~W~~~dl~d------------~~~l~ely~lL~~nYVEDdd~~fRf~YS~efL~WaL~pPg~~~~whiGVR~ 84 (162)
T PF01233_consen 17 PYPLPDGFEWSTLDLND------------DEELKELYELLNENYVEDDDNMFRFDYSKEFLKWALKPPGWKKEWHIGVRV 84 (162)
T ss_dssp ----STTEEEEE--TTS------------HHHHHHHHHHHHHHSSBTTTSSEEE---HHHHHHHHTSTT--GGGEEEEEE
T ss_pred CCCCCCCCEEEecCCCC------------HHHHHHHHHHHHhcCccCCcceEEeeCCHHHHhheeeCcCCccceEEEEEE
Confidence 45799999887654433 344556666655533222 234444444443 24444432
Q ss_pred ecccCCCCCCCCCCeEEEEEEEEeC-----CC--CcEEEEEEEECCCCCCCCHHHHHHHHHHHHHHhCCCCEEE
Q 025840 149 SIRKSPGSEGNEQRTLIGMARATSD-----HA--FNATIWDVLVDPSYQGQGLGKALVEKVVRALLQKDIGNIS 215 (247)
Q Consensus 149 ~~~~~~~~~~~~~g~iVG~~~~~~~-----~~--~~~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g~~~i~ 215 (247)
..++++|||+...+. +. ...+|..++||+..|.++++--|+.++.+++...|+-...
T Consensus 85 ----------~~~~kLvgfIsaip~~irv~~~~~~~~eINFLCVhKklRskrlAPvLIkEItRRvn~~gI~qAv 148 (162)
T PF01233_consen 85 ----------KSSKKLVGFISAIPATIRVRDKVIKMVEINFLCVHKKLRSKRLAPVLIKEITRRVNLQGIWQAV 148 (162)
T ss_dssp ----------TTTTEEEEEEEEEEEEEEETTEEEEEEEEEEEEE-GGGTTSSHHHHHHHHHHHHHHTTT--EEE
T ss_pred ----------CCCCEEEEEEccceEEEEEeeeEeeeeeEEEEeecHhHhhcCCcHHHHHHHHHHhhhcCceeee
Confidence 248999999976421 11 2478999999999999999999999999999998875443
No 77
>TIGR03694 exosort_acyl putative PEP-CTERM/exosortase system-associated acyltransferase. Members of this protein family are restricted to bacterial species with the PEP-CTERM/exosortase system predicted to act in exopolysaccharide-associated protein targeting. PSI-BLAST and CDD reveal relationships to the acyltransferase family that includes N-acyl-L-homoserine lactone synthetase. Several members of this family may be found in a single genome. These proteins likely contribute to chemical modifications in exopolysaccharide and biofilm structural material production.
Probab=97.18 E-value=0.0037 Score=53.54 Aligned_cols=60 Identities=10% Similarity=0.159 Sum_probs=51.7
Q ss_pred cEEEEEEEECCCCCCC--------C--------------------HHHHHHHHHHHHHHhCCCCEEEEEeCHhhHHHHHh
Q 025840 177 NATIWDVLVDPSYQGQ--------G--------------------LGKALVEKVVRALLQKDIGNISLFADSQVVDFYRN 228 (247)
Q Consensus 177 ~~~I~~l~V~p~~Rg~--------G--------------------lG~~Ll~~~~~~a~~~g~~~i~L~~n~~a~~fY~k 228 (247)
..+++.++|+|++|++ | +...|+..+.+.|.+.|++.+...+.+...+++++
T Consensus 111 i~E~SRf~V~~~~r~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~a~~~Gi~~~~~v~~~~l~r~l~r 190 (241)
T TIGR03694 111 IAEVSRLAVSKDFRRRKGEKLKPSGVGVIETEAPFSESERRRFPHIPLGLYLGLIALSSANGITHWYAIMEPRLARLLSR 190 (241)
T ss_pred eEEeehheECHhHhCCcccccccccccccccccccchhhcccCchHHHHHHHHHHHHHHHCCCcEEEEEeCHHHHHHHHH
Confidence 5788899999999974 2 55789999999999999999999999999999999
Q ss_pred CCCeecCC
Q 025840 229 LGFEPDPE 236 (247)
Q Consensus 229 ~GF~~~~~ 236 (247)
+|+....-
T Consensus 191 ~G~~~~~l 198 (241)
T TIGR03694 191 FGIQFRQV 198 (241)
T ss_pred hCCceEEc
Confidence 99865443
No 78
>PF00765 Autoind_synth: Autoinducer synthetase; InterPro: IPR001690 Bacterial species have many methods of controlling gene expression and cell growth. Regulation of gene expression in response to changes in cell density is termed quorum sensing [, ]. Quorum-sensing bacteria produce, release and respond to hormone-like molecules (autoinducers) that accumulate in the external environment as the cell population grows. Once a threshold of these molecules is reached, a signal transduction cascade is triggered that ultimately leads to behavioural changes in the bacterium []. Autoinducers are thus clearly important mediators of molecular communication. Conjugal transfer of Agrobacterium octopine-type Ti plasmids is activated by octopine, a metabolite released from plant tumours []. Octopine causes conjugal donors to secrete a pheromone, Agrobacterium autoinducer (AAI), and exogenous AAI further stimulates conjugation. The putative AAI synthase and an AAI-responsive transcriptional regulator have been found to be encoded by the Ti plasmid traI and traR genes, respectively. TraR and TraI are similar to the LuxR and LuxI regulatory proteins of Vibrio fischeri, and AAI is similar in structure to the diffusable V. fischeri autoinducer, the inducing ligand of LuxR. TraR activates target genes in the presence of AAI and also activates traR and traI themselves, creating two positive-feedback loops. TraR-AAI-mediated activation in wild-type Agrobacterium strains is enhanced by culturing on solid media, suggesting a possible role in cell density sensing []. Production of light by the marine bacterium V. fischeri and by recombinant hosts containing cloned lux genes is controlled by the density of the culture []. Density-dependent regulation of lux gene expression has been shown to require a locus consisting of the luxR and luxI genes. In these and other Gram-negative bacteria, N-(3-oxohexanoyl)-L-homoserine lactone (OHHL) acts as the autoinducer by binding to transcriptional regulatory proteins and activating them []. OHHL and related molecules, such as N-butanoyl- (BHL), N-hexanoyl- (HHL) and N-oxododecanoyl- (PAI) homoserine lactones, are produced by a family of proteins that share a high level of sequence similarity. Proteins which currently members of this family include: luxI from V. fischeri. ahyI and asaI from Aeromonas species, which synthesize BHL and whose targets are ahyR and asaR respectively. carI from Erwinia carotovora. The target of OHHL is carR which activates genes involved in the biosynthesis of carbapenem antibiotics. eagI from Enterobacter agglomerans. The target of OHHL is not yet known. esaI from Erwinia stewartii. expI from Erwinia carotovora. lasI from Pseudomonas aeruginosa, which synthesizes PAI and whose target is lasR which activates the transcription of the elastase gene. rhlI (or vsmI) from P. aeruginosa, which synthesizes BHL and HHL and whose target is rhlR. swrI from Serratia liquefaciens, which synthesizes BHL. yenI from Yersinia enterocolitica. ; GO: 0007165 signal transduction; PDB: 3P2H_A 3P2F_A 1KZF_A 1K4J_A 1RO5_A.
Probab=97.17 E-value=0.013 Score=48.07 Aligned_cols=78 Identities=19% Similarity=0.191 Sum_probs=61.7
Q ss_pred CCeEEEEEEEEe---------------------CCCCcEEEEEEEECCCCCC------CCHHHHHHHHHHHHHHhCCCCE
Q 025840 161 QRTLIGMARATS---------------------DHAFNATIWDVLVDPSYQG------QGLGKALVEKVVRALLQKDIGN 213 (247)
Q Consensus 161 ~g~iVG~~~~~~---------------------~~~~~~~I~~l~V~p~~Rg------~GlG~~Ll~~~~~~a~~~g~~~ 213 (247)
+|+++|++++.+ ......+++.++|+++.++ .-+...|+..+.+.|.++|++.
T Consensus 53 ~g~v~g~~RLlptt~p~ML~~~F~~ll~~~~~p~~~~vwE~SRf~v~~~~~~~~~~~~~~~~~~L~~~~~e~a~~~gi~~ 132 (182)
T PF00765_consen 53 DGRVVGCARLLPTTGPYMLSDVFPHLLPDGPAPRSPDVWELSRFCVDPDRRRSRAGSRSPVTMELLLGMVEFALSNGIRH 132 (182)
T ss_dssp TTEEEEEEEEEETTS--HHHHCTGGGHTTS---SSTTEEEEEEEEE-HCCCHHCHSCC-THHHHHHHHHHHHHHCTT-SE
T ss_pred CCEEEEEeeeccCCCcchhhhHHHHHhCCCCCCCCCcceeeeEEEEcccccccccccccHHHHHHHHHHHHHHHHCCCCE
Confidence 799999999841 1245689999999998542 2477899999999999999999
Q ss_pred EEEEeCHhhHHHHHhCCCeecCCce
Q 025840 214 ISLFADSQVVDFYRNLGFEPDPEGI 238 (247)
Q Consensus 214 i~L~~n~~a~~fY~k~GF~~~~~~~ 238 (247)
+..-++....++++++||....-+.
T Consensus 133 ~v~V~~~~~~r~l~r~G~~~~~lG~ 157 (182)
T PF00765_consen 133 IVGVVDPAMERILRRAGWPVRRLGP 157 (182)
T ss_dssp EEEEEEHHHHHHHHHCT-EEEESSE
T ss_pred EEEEEChHHHHHHHHcCCceEECCC
Confidence 9998999999999999999765443
No 79
>PF13480 Acetyltransf_6: Acetyltransferase (GNAT) domain
Probab=97.15 E-value=0.008 Score=45.83 Aligned_cols=57 Identities=14% Similarity=0.209 Sum_probs=50.6
Q ss_pred CCeEEEEEEEEeCCCCcEEEEEEEECCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEe
Q 025840 161 QRTLIGMARATSDHAFNATIWDVLVDPSYQGQGLGKALVEKVVRALLQKDIGNISLFA 218 (247)
Q Consensus 161 ~g~iVG~~~~~~~~~~~~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g~~~i~L~~ 218 (247)
+|++||+......++ ..+....+++|++++.++|..|+.++++++.+.|++.+.+..
T Consensus 79 ~g~~va~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~l~~~~i~~a~~~g~~~~d~g~ 135 (142)
T PF13480_consen 79 GGEPVAFALGFRHGG-TLYYWYGGYDPEYRKYSPGRLLLWEAIRWAIERGLRYFDFGG 135 (142)
T ss_pred CCEEEEEEEEEEECC-EEEEEEEEECHhhHhCCHHHHHHHHHHHHHHHCCCCEEEECC
Confidence 899999997766444 778888999999999999999999999999999998888765
No 80
>PRK13834 putative autoinducer synthesis protein; Provisional
Probab=97.04 E-value=0.0077 Score=50.38 Aligned_cols=77 Identities=14% Similarity=0.158 Sum_probs=61.9
Q ss_pred CCCeEEEEEEEEeC---------------------CCCcEEEEEEEECCCCC---CCC----HHHHHHHHHHHHHHhCCC
Q 025840 160 EQRTLIGMARATSD---------------------HAFNATIWDVLVDPSYQ---GQG----LGKALVEKVVRALLQKDI 211 (247)
Q Consensus 160 ~~g~iVG~~~~~~~---------------------~~~~~~I~~l~V~p~~R---g~G----lG~~Ll~~~~~~a~~~g~ 211 (247)
++|++||++++... .....+++.++|+++++ +.+ +...|+..+.+.+...|+
T Consensus 61 ~~g~vvG~~RLlptt~p~ml~~~fp~l~~~~~~~~~~~v~E~SRf~V~~~~~~~~~~~~~~~~~~~L~~~~~~~a~~~Gi 140 (207)
T PRK13834 61 DSGRVAGCARLLPAIGPTMLAQVFPQLLPAGRLNAHPAMIESSRFCVDTALAEGRGGGQLHEATLTMFAGIIEWSMANGY 140 (207)
T ss_pred CCCeEEEEEecccCCCcchhhhhcHHhcCCCCCCCCCCEEEEeeeEEcccccccccccccCHHHHHHHHHHHHHHHHCCC
Confidence 47899999987311 23458999999999863 222 667899999999999999
Q ss_pred CEEEEEeCHhhHHHHHhCCCeecCC
Q 025840 212 GNISLFADSQVVDFYRNLGFEPDPE 236 (247)
Q Consensus 212 ~~i~L~~n~~a~~fY~k~GF~~~~~ 236 (247)
+.+...+++...++++++||....-
T Consensus 141 ~~~~~v~~~~~~r~l~r~G~~~~~l 165 (207)
T PRK13834 141 TEIVTATDLRFERILARAGWPMQRL 165 (207)
T ss_pred CEEEEEECHHHHHHHHHcCCCeEEC
Confidence 9999888999999999999876443
No 81
>COG1243 ELP3 Histone acetyltransferase [Transcription / Chromatin structure and dynamics]
Probab=96.92 E-value=0.0014 Score=60.06 Aligned_cols=52 Identities=27% Similarity=0.497 Sum_probs=48.3
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEeCHhhHHHHHhCCCeecCCc
Q 025840 186 DPSYQGQGLGKALVEKVVRALLQKDIGNISLFADSQVVDFYRNLGFEPDPEG 237 (247)
Q Consensus 186 ~p~~Rg~GlG~~Ll~~~~~~a~~~g~~~i~L~~n~~a~~fY~k~GF~~~~~~ 237 (247)
.-.||.+|+|+.||+++++.|++.+...|.+-+...++..|+|+||+.+|..
T Consensus 459 ~~~~QH~G~G~~L~~~AE~ia~ee~~~ki~viSgiG~ReYy~k~GY~~~gpY 510 (515)
T COG1243 459 EDEWQHRGYGRELLEEAERIAREEGAKKILVISGIGVREYYRKLGYELDGPY 510 (515)
T ss_pred cchhhcccHHHHHHHHHHHHHHhhccccEEEEecccHHHHHHHhCccccCCc
Confidence 4789999999999999999999999999999999999999999999998864
No 82
>COG5628 Predicted acetyltransferase [General function prediction only]
Probab=96.86 E-value=0.0031 Score=47.58 Aligned_cols=70 Identities=9% Similarity=0.202 Sum_probs=52.1
Q ss_pred CCeEEEEEEEEeC----CCCcEEEEEEEECCCCCCCCHHHHHHHHHHHHHHhCCC-CEEEEEeCHhhHHHHHhCCCe
Q 025840 161 QRTLIGMARATSD----HAFNATIWDVLVDPSYQGQGLGKALVEKVVRALLQKDI-GNISLFADSQVVDFYRNLGFE 232 (247)
Q Consensus 161 ~g~iVG~~~~~~~----~~~~~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g~-~~i~L~~n~~a~~fY~k~GF~ 232 (247)
+|.+|||+.+... ......+..+.+...|||+|+|++.+.++....+ |. ..+.+--|.+|+.|+++.=..
T Consensus 45 ~~~~igf~l~L~~~~~~~~iD~~~~efFIi~k~~~~GvGR~aaK~If~~~~--g~w~Va~i~EN~PA~~fwK~~~~t 119 (143)
T COG5628 45 GGLPVGFALVLDLAHSPTPIDRAVAEFFIVRKHRRRGVGRAAAKAIFGSAW--GVWQVATVRENTPARAFWKRVAET 119 (143)
T ss_pred CCceeeeeeeecccCCCCcccccchheEeeehhhccchhHHHHHHHHHHhh--ceEEEEEeccCChhHHHHHhhhcc
Confidence 9999999987422 1123457789999999999999999988865543 43 334454699999999997554
No 83
>PF04958 AstA: Arginine N-succinyltransferase beta subunit; InterPro: IPR007041 Arginine N-succinyltransferase catalyses the transfer of succinyl-CoA to arginine to produce succinylarginine. This is the first step in arginine catabolism via the arginine succinyltransferase pathway. Six major L-arginine-degrading pathways have been described for prokaryotes []. Many bacteria arginine succinyltransferase 2.3.1.109 from EC, which is the AstA protein of the succinyltransferase (ast) pathway operon consists of five genes. In a few species, such as Pseudomonas aeruginosa, a tandem gene pair encodes alpha and beta subunits of a heterodimer that is designated arginine and ornithine succinyltransferase (AOST). This entry represents the family of proteins that make up the beta subunit of the heterodimer of Ast and AOST.; GO: 0008791 arginine N-succinyltransferase activity, 0006527 arginine catabolic process; PDB: 1YLE_A.
Probab=96.71 E-value=0.021 Score=51.15 Aligned_cols=120 Identities=19% Similarity=0.311 Sum_probs=67.4
Q ss_pred EEEEecCCCCCHHHHHHHHHHcC--CCC--CcHHHHHHHHh----------------cceeEEEEEecccCCCCCCCCCC
Q 025840 103 QIIFSSGGDVDVYELQTLCDKVG--WPR--RPLSKLAAALK----------------NSYLVATLHSIRKSPGSEGNEQR 162 (247)
Q Consensus 103 ~i~~~~~~~~d~~~l~~l~~~~~--w~~--~~~~~~~~~~~----------------~~~~v~~~~~~~~~~~~~~~~~g 162 (247)
++.+|+++..|.+++.++....+ .+. .+.+.+.+.++ ..|.++.. ..+.|
T Consensus 1 M~viRp~~~~Dl~aL~~LA~~sg~G~TsLP~d~~~L~~rI~~S~~sFa~~~~~~~~~~~YlfVLE----------D~~tg 70 (342)
T PF04958_consen 1 MLVIRPARPSDLDALYALARESGPGFTSLPPDREALAERIERSERSFAGRDVDFPGDEGYLFVLE----------DTETG 70 (342)
T ss_dssp -EEEEE--GGGHHHHHHHHHHS-TT-TTS-S-HHHHHHHHHHHHHHHH-TT----S--EEEEEEE----------ETTT-
T ss_pred CeEEecCchhhHHHHHHHHHHcCCCcccCCCCHHHHHHHHHHHHHHhhccccCCCCccceEEEEE----------ecCCC
Confidence 46788999999999999999864 343 22222222211 12333332 23579
Q ss_pred eEEEEEEEE------------------------------------eCCCCcEEEEEEEECCCCCCCCHHHHHHHHHHHHH
Q 025840 163 TLIGMARAT------------------------------------SDHAFNATIWDVLVDPSYQGQGLGKALVEKVVRAL 206 (247)
Q Consensus 163 ~iVG~~~~~------------------------------------~~~~~~~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a 206 (247)
+|||++.+. .+..+..+|..+.++|+||+-|.|+.|-+.-.=.+
T Consensus 71 ~vvGts~I~a~vG~~~PfY~yr~~~~vh~S~~L~v~~~~~~L~L~~d~tG~sEl~tLfL~p~~R~~~~G~lLSr~RfLFi 150 (342)
T PF04958_consen 71 EVVGTSAIEAAVGLDEPFYSYRVSTLVHASRELGVRNRHETLTLSNDYTGCSELCTLFLDPDYRGGGNGRLLSRSRFLFI 150 (342)
T ss_dssp -EEEEEEEESSTTSSS---EEEEEEEEEEETTTTEEEEEEEEEEE-TTTTSEEEEEEEE-GGGTTSHHHHHHHHHHHHHH
T ss_pred cEEEEEeEEeccCCCCCcEEEEcCceeEcCcccCCccceeeEeeecCCCCCeeeEEEEECHHHcCCchHHHHHHHHHHHH
Confidence 999999873 23456789999999999999999999887655444
Q ss_pred HhC---CCCEEEEE----eC-HhhHHHHHhCCCe
Q 025840 207 LQK---DIGNISLF----AD-SQVVDFYRNLGFE 232 (247)
Q Consensus 207 ~~~---g~~~i~L~----~n-~~a~~fY~k~GF~ 232 (247)
.+. =...+..+ .+ ..--.|++.+|=+
T Consensus 151 A~~~~rF~~~viAElrG~~De~G~SPFWdalG~~ 184 (342)
T PF04958_consen 151 AQHRERFADRVIAELRGVSDEDGRSPFWDALGRH 184 (342)
T ss_dssp HH-GGGS-SEEEEE--B---TT---HHHHHTGGG
T ss_pred HhChhhcchheeeeccCCcCCCCCCchHHHhhcc
Confidence 432 12334433 12 2344677776643
No 84
>COG3375 Uncharacterized conserved protein [Function unknown]
Probab=96.40 E-value=0.032 Score=46.77 Aligned_cols=94 Identities=19% Similarity=0.148 Sum_probs=62.5
Q ss_pred CHHHHHHHHHHcCCCCCc-----HHHHHHHHhcceeEEEEEecccCCCCCCCCCCeEEEEEEEEeCC-CC--cEEEEEEE
Q 025840 113 DVYELQTLCDKVGWPRRP-----LSKLAAALKNSYLVATLHSIRKSPGSEGNEQRTLIGMARATSDH-AF--NATIWDVL 184 (247)
Q Consensus 113 d~~~l~~l~~~~~w~~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~iVG~~~~~~~~-~~--~~~I~~l~ 184 (247)
+++++.+... ..|...+ .+.+.....++-.++..+. .+|++||.....+.. .+ ..+=..++
T Consensus 13 el~~~~dV~~-~aWg~~d~~~~~~d~i~al~~~GGlvlgAf~----------~dg~lVGls~G~pg~r~g~~y~ySH~~g 81 (266)
T COG3375 13 ELDEAEDVQA-SAWGSEDRDGAPADTIRALRYHGGLVLGAFS----------ADGRLVGLSYGYPGGRGGSLYLYSHMLG 81 (266)
T ss_pred HHHHHHHHHH-HHhCccccccchHHHHHHHHhcCCeEEEEEc----------CCCcEEEEEeccCCcCCCceeeeeeehh
Confidence 4444444433 3566543 2344444445555555442 367999998876621 22 34556799
Q ss_pred ECCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEE
Q 025840 185 VDPSYQGQGLGKALVEKVVRALLQKDIGNISLF 217 (247)
Q Consensus 185 V~p~~Rg~GlG~~Ll~~~~~~a~~~g~~~i~L~ 217 (247)
|+|++++.|+|-+|=..--+.+.+.|++.+.=+
T Consensus 82 V~e~~k~sglg~aLK~~Qre~a~~~G~tli~WT 114 (266)
T COG3375 82 VREEVKGSGLGVALKMKQRERALSMGYTLIAWT 114 (266)
T ss_pred ccccccccchhhhhHHHHHHHHHhcCeeeEEEe
Confidence 999999999999999888899999998876544
No 85
>PRK10456 arginine succinyltransferase; Provisional
Probab=96.39 E-value=0.04 Score=49.29 Aligned_cols=90 Identities=21% Similarity=0.364 Sum_probs=61.1
Q ss_pred EEEecCCCCCHHHHHHHHHHcC--CCC--CcHHHHHHHHh--------------cceeEEEEEecccCCCCCCCCCCeEE
Q 025840 104 IIFSSGGDVDVYELQTLCDKVG--WPR--RPLSKLAAALK--------------NSYLVATLHSIRKSPGSEGNEQRTLI 165 (247)
Q Consensus 104 i~~~~~~~~d~~~l~~l~~~~~--w~~--~~~~~~~~~~~--------------~~~~v~~~~~~~~~~~~~~~~~g~iV 165 (247)
+.+|++...|.+.+.++....+ .+. .+.+.+.+.++ ..|.++.. ..+.|+||
T Consensus 2 ~vvRpv~~~Dl~aL~~LA~~sG~G~TsLP~d~~~L~~rI~~S~~sF~~~~~~~~~~YlFVLE----------D~~tg~vv 71 (344)
T PRK10456 2 MVIRPVERSDLAALMQLAGKTGGGLTSLPANEATLAARIERALKTWQGELPKSEQGYVFVLE----------DSETGTVA 71 (344)
T ss_pred eEEecCccccHHHHHHHHHHcCCCcccCCCCHHHHHHHHHHHHHHhcCcCCCCCccEEEEEE----------eCCCCcEE
Confidence 6788899999999999999864 332 22333332222 12333332 23579999
Q ss_pred EEEEEE------------------------------------eCCCCcEEEEEEEECCCCCCCCHHHHHHHHHH
Q 025840 166 GMARAT------------------------------------SDHAFNATIWDVLVDPSYQGQGLGKALVEKVV 203 (247)
Q Consensus 166 G~~~~~------------------------------------~~~~~~~~I~~l~V~p~~Rg~GlG~~Ll~~~~ 203 (247)
|++.+. .+..+..+|..+.++|+||+-|.|+.|-+.-.
T Consensus 72 Gts~I~a~vG~~~PfY~yr~~~~vhaS~~L~v~~~~~~L~l~nd~tG~sElctLfl~p~~R~~~~G~LLSr~Rf 145 (344)
T PRK10456 72 GICAIEVAVGLNDPWYNYRVGTLVHASKELNVYNALPTLFLSNDHTGSSELCTLFLDPDWRKEGNGYLLSKSRF 145 (344)
T ss_pred EEEeEEecccCCCCCEEEEcCceeecCcccCCceeeeeEEeeccCCCCceeEEEEECHHHcCCCchhHHHHHHH
Confidence 999762 22345678999999999999999998876543
No 86
>PF13880 Acetyltransf_13: ESCO1/2 acetyl-transferase
Probab=96.23 E-value=0.0062 Score=41.80 Aligned_cols=29 Identities=21% Similarity=0.385 Sum_probs=26.3
Q ss_pred EEEEEEEECCCCCCCCHHHHHHHHHHHHH
Q 025840 178 ATIWDVLVDPSYQGQGLGKALVEKVVRAL 206 (247)
Q Consensus 178 ~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a 206 (247)
..|..|.|+|.+|++|||+.||+.+.+..
T Consensus 6 ~GI~RIWV~~~~RR~GIAt~Lld~ar~~~ 34 (70)
T PF13880_consen 6 CGISRIWVSPSHRRKGIATRLLDAARENF 34 (70)
T ss_pred EEeEEEEeChhhhhhhHHHHHHHHHHHhc
Confidence 56889999999999999999999988775
No 87
>cd04264 DUF619-NAGS DUF619 domain of various N-acetylglutamate Synthases of the fungal arginine-biosynthetic pathway and urea cycle found in humans and fish. DUF619-NAGS: This family includes the DUF619 domain of various N-acetylglutamate synthases (NAGS) of the urea cycle found in humans and fish, the DUF619 domain of the NAGS of the fungal arginine-biosynthetic pathway (FABP), as well as the DUF619 domain present in C-terminal of a NAG kinase-like domain in a limited number of predicted NAGSs found in bacteria and Dictyostelium. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate. NAGS is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Domain architecture of ureogenic and fungal NAGS consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. The DUF619 domain function has yet to be characterized.
Probab=96.09 E-value=0.033 Score=41.02 Aligned_cols=79 Identities=19% Similarity=0.141 Sum_probs=55.1
Q ss_pred CCeEEEEEEEEeCC--CCcEEEEEEEECCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEE-eCHhhHHHH--HhCCCeecC
Q 025840 161 QRTLIGMARATSDH--AFNATIWDVLVDPSYQGQGLGKALVEKVVRALLQKDIGNISLF-ADSQVVDFY--RNLGFEPDP 235 (247)
Q Consensus 161 ~g~iVG~~~~~~~~--~~~~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g~~~i~L~-~n~~a~~fY--~k~GF~~~~ 235 (247)
++...|++.++... ....+|..++|.|+.||+|+|..|++.+.+... .-++-. .+....+.| +.-|+-..+
T Consensus 16 ~e~y~~~aIvt~~~~~~~~~yLdKfaV~~~~~g~gvad~vf~~i~~d~~----~L~Wrsr~~n~~n~Wyf~rs~Gs~~~~ 91 (99)
T cd04264 16 SEGYNAAAIVTYEGVNNGVPYLDKFAVSSSAQGEGTSDALWRRLRRDFP----KLFWRSRKTNPINPWYFKRSDGSFKNG 91 (99)
T ss_pred eCCceEEEEEeccCCCCCceEEEEEEEchhhhhcChHHHHHHHHHhhCC----ceEEEeCCCCcccceEEEeeEEEEEcC
Confidence 77788888887644 467999999999999999999999998887642 223322 244444555 345665543
Q ss_pred CceeeeEecC
Q 025840 236 EGIKGMFWHP 245 (247)
Q Consensus 236 ~~~~~~~w~~ 245 (247)
...++||.
T Consensus 92 --~~~lFW~G 99 (99)
T cd04264 92 --QWKVFWYG 99 (99)
T ss_pred --CeEEEeeC
Confidence 45677763
No 88
>PF05301 Mec-17: Touch receptor neuron protein Mec-17; InterPro: IPR007965 Mec-17 is the protein product of one of the 18 genes required for the development and function of the touch receptor neuron for gentle touch. Mec-17 is specifically required for maintaining the differentiation of the touch receptor []. This family is conserved to higher eukaryotes.; GO: 0019799 tubulin N-acetyltransferase activity
Probab=96.08 E-value=0.034 Score=42.06 Aligned_cols=82 Identities=16% Similarity=0.265 Sum_probs=51.5
Q ss_pred CCCeEEEEEEE------EeCCCCc-------EEEEEEEECCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEe-CHhhHHH
Q 025840 160 EQRTLIGMARA------TSDHAFN-------ATIWDVLVDPSYQGQGLGKALVEKVVRALLQKDIGNISLFA-DSQVVDF 225 (247)
Q Consensus 160 ~~g~iVG~~~~------~~~~~~~-------~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g~~~i~L~~-n~~a~~f 225 (247)
..|.++|+.-+ ..+..+. .-|-+++|++..|++|+|+.|.+++++.=.-. ...+..+- ++...+|
T Consensus 16 ~~g~viG~LKVG~K~Lfl~d~~g~~~e~~~~~cvLDFyVhes~QR~G~Gk~LF~~ML~~e~~~-p~~~a~DrPS~Kll~F 94 (120)
T PF05301_consen 16 GKGAVIGFLKVGYKKLFLLDERGQHREIEPLLCVLDFYVHESRQRRGYGKRLFDHMLQEENVS-PHQLAIDRPSPKLLSF 94 (120)
T ss_pred CCceEEEEEEEeeeeEEEEcCCCCEEEecccceeeeEEEEeceeccCchHHHHHHHHHHcCCC-cccceecCCcHHHHHH
Confidence 46889999854 1222211 24678999999999999999999998664221 22233332 5667777
Q ss_pred HHh-CCCeecCCceeeeE
Q 025840 226 YRN-LGFEPDPEGIKGMF 242 (247)
Q Consensus 226 Y~k-~GF~~~~~~~~~~~ 242 (247)
.+| .|-+..-.+.+-++
T Consensus 95 l~Khy~L~~~ipQ~NNFV 112 (120)
T PF05301_consen 95 LKKHYGLQRYIPQSNNFV 112 (120)
T ss_pred HHHhcCCCcCCCCCccEE
Confidence 766 56555444444333
No 89
>COG3916 LasI N-acyl-L-homoserine lactone synthetase [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=95.92 E-value=0.15 Score=42.35 Aligned_cols=76 Identities=14% Similarity=0.161 Sum_probs=61.4
Q ss_pred CCCeEEEEEEEE---------------------eCCCCcEEEEEEEECC--CCCCC---C-HHHHHHHHHHHHHHhCCCC
Q 025840 160 EQRTLIGMARAT---------------------SDHAFNATIWDVLVDP--SYQGQ---G-LGKALVEKVVRALLQKDIG 212 (247)
Q Consensus 160 ~~g~iVG~~~~~---------------------~~~~~~~~I~~l~V~p--~~Rg~---G-lG~~Ll~~~~~~a~~~g~~ 212 (247)
.+|+|+|++++. +.+.+..+.+.++|+. .-++. . ++..|+..+++++.++|++
T Consensus 60 ~~g~I~G~~RlLptt~P~mL~~vF~~Ll~~~~~P~~p~vwEsSRF~vd~~~a~~~~g~~~~a~~el~~g~ie~a~~~G~~ 139 (209)
T COG3916 60 SDGRIVGCVRLLPTTGPYMLTDVFPALLEGGPPPSSPGVWESSRFAVDKPSARRAAGGVSPAAYELFAGMIEYALARGIT 139 (209)
T ss_pred CCCcEEEEEEeccCCCcchhhhhhHHHhcCCCCCCCCCeEEEeeeeeccccchhhcCCccHHHHHHHHHHHHHHHHcCCc
Confidence 599999999873 1123457888898887 33333 3 4779999999999999999
Q ss_pred EEEEEeCHhhHHHHHhCCCeecC
Q 025840 213 NISLFADSQVVDFYRNLGFEPDP 235 (247)
Q Consensus 213 ~i~L~~n~~a~~fY~k~GF~~~~ 235 (247)
.|...++....+.+++.||....
T Consensus 140 ~IvtVt~~~meril~r~Gw~~~r 162 (209)
T COG3916 140 GIVTVTDTGMERILRRAGWPLTR 162 (209)
T ss_pred eEEEEEchHHHHHHHHcCCCeEE
Confidence 99999999999999999998654
No 90
>KOG2535 consensus RNA polymerase II elongator complex, subunit ELP3/histone acetyltransferase [Chromatin structure and dynamics; Transcription]
Probab=95.82 E-value=0.013 Score=52.21 Aligned_cols=51 Identities=29% Similarity=0.555 Sum_probs=45.1
Q ss_pred CCCCCCHHHHHHHHHHHHHHhC-CCCEEEEEeCHhhHHHHHhCCCeecCCce
Q 025840 188 SYQGQGLGKALVEKVVRALLQK-DIGNISLFADSQVVDFYRNLGFEPDPEGI 238 (247)
Q Consensus 188 ~~Rg~GlG~~Ll~~~~~~a~~~-g~~~i~L~~n~~a~~fY~k~GF~~~~~~~ 238 (247)
.||.||+|+.||+++++.|++. |-..+.+-+.......|+|+||+..|...
T Consensus 498 KfQHQG~GtLLmeEAERIAr~EHgS~KiavISGVGtR~YY~klGY~LdGPYM 549 (554)
T KOG2535|consen 498 KFQHQGFGTLLMEEAERIAREEHGSGKIAVISGVGTRNYYRKLGYELDGPYM 549 (554)
T ss_pred hhhhcchhhHHHHHHHHHHHHhcCCCceEEEeccchHHHHHhhCeeecChhH
Confidence 6999999999999999999874 77788888888889999999999987643
No 91
>PRK01305 arginyl-tRNA-protein transferase; Provisional
Probab=95.62 E-value=0.4 Score=40.98 Aligned_cols=81 Identities=14% Similarity=0.137 Sum_probs=61.6
Q ss_pred CCCCCcHHHHHHHHhccee---EEEEEecccCCCCCCCCCCeEEEEEEEEeCCCCcEEEEEEEECCCCCCCCHHHHHHHH
Q 025840 125 GWPRRPLSKLAAALKNSYL---VATLHSIRKSPGSEGNEQRTLIGMARATSDHAFNATIWDVLVDPSYQGQGLGKALVEK 201 (247)
Q Consensus 125 ~w~~~~~~~~~~~~~~~~~---v~~~~~~~~~~~~~~~~~g~iVG~~~~~~~~~~~~~I~~l~V~p~~Rg~GlG~~Ll~~ 201 (247)
+|...+.+.+..++.++.. ++.++ ++|++||.+.+..-.+..--| ...-||++-.+++|+..+-.
T Consensus 124 ~m~~~~~~~y~~Fl~~~~~~t~~~ey~-----------~~g~LiaVav~D~l~d~lSAV-Y~FyDPd~~~~SLG~~~iL~ 191 (240)
T PRK01305 124 GMDPPSRDQYAQFLEDSWVNTRFIEFR-----------GDGKLVAVAVTDVLDDGLSAV-YTFYDPDEEHRSLGTFAILW 191 (240)
T ss_pred CCCCCCHHHHHHHHhcCCCCcEEEEEE-----------eCCeEEEEEEEeccCCceeeE-EEeeCCCccccCCHHHHHHH
Confidence 4555566777777765432 33333 399999999886554443444 56689999999999999999
Q ss_pred HHHHHHhCCCCEEEEE
Q 025840 202 VVRALLQKDIGNISLF 217 (247)
Q Consensus 202 ~~~~a~~~g~~~i~L~ 217 (247)
-++.|++.|...+.|.
T Consensus 192 qI~~ak~~gl~y~YLG 207 (240)
T PRK01305 192 QIELAKRLGLPYVYLG 207 (240)
T ss_pred HHHHHHHcCCCeEeee
Confidence 9999999999999888
No 92
>TIGR03244 arg_catab_AstA arginine N-succinyltransferase. In many bacteria, the arginine succinyltransferase (ast) pathway operon consists of five genes, including this protein, arginine N-succinyltransferase (EC 2.3.1.109). In a few species, such as Pseudomonas aeruginosa, the member of this family is encoded adjacent to a paralog, and the two polypeptides form a heterodimeric enzyme, active on both arginine and ornithine. In such species, this polypeptide may be treated as the beta subunit of an enzyme that may be named either arginine N-succinyltransferase (AST) or arginine and orthithine N-succinyltransferase (AOST).
Probab=95.62 E-value=0.13 Score=46.00 Aligned_cols=88 Identities=20% Similarity=0.309 Sum_probs=58.0
Q ss_pred EecCCCCCHHHHHHHHHHcC--CCC--CcHHHHHHHHh--------------cceeEEEEEecccCCCCCCCCCCeEEEE
Q 025840 106 FSSGGDVDVYELQTLCDKVG--WPR--RPLSKLAAALK--------------NSYLVATLHSIRKSPGSEGNEQRTLIGM 167 (247)
Q Consensus 106 ~~~~~~~d~~~l~~l~~~~~--w~~--~~~~~~~~~~~--------------~~~~v~~~~~~~~~~~~~~~~~g~iVG~ 167 (247)
+|++...|.+.+.++....+ .+. .+.+.+.+.++ ..|.++.. ..+.|+|||+
T Consensus 2 vRPv~~~Dl~aL~~LA~~sg~G~TsLP~d~~~L~~rI~~S~~sF~~~~~~~~~~YlFVLE----------Dt~tg~vvGt 71 (336)
T TIGR03244 2 VRPVETSDLDALYQLAQSTGIGLTSLPANEDLLSARIERAEKTFSGELTRAEQGYLFVLE----------DTETGTVAGV 71 (336)
T ss_pred cccCccccHHHHHHHHHHcCCCcccCCCCHHHHHHHHHHHHHHhcCcCCCCCccEEEEEE----------eCCCCeEEEE
Confidence 46677889999999998854 332 22233332222 12333332 2357999999
Q ss_pred EEEE------------------------------------eCCCCcEEEEEEEECCCCCCCCHHHHHHHHHH
Q 025840 168 ARAT------------------------------------SDHAFNATIWDVLVDPSYQGQGLGKALVEKVV 203 (247)
Q Consensus 168 ~~~~------------------------------------~~~~~~~~I~~l~V~p~~Rg~GlG~~Ll~~~~ 203 (247)
+.+. .+..+..+|..+.++|+||+-|.|+.|-+.-.
T Consensus 72 s~I~a~vG~~~PfY~yr~~~~vhaS~~L~v~~~~~~L~l~nd~tG~SElctLfL~p~~R~~~~G~LLSr~Rf 143 (336)
T TIGR03244 72 SAIEAAVGLEEPFYNYRVGTVVHASKELGIYKALETLFLSNDLTGYSELCTLFLDPDYRKGGNGRLLSKSRF 143 (336)
T ss_pred EeEEecccCCCCCEEEEcCceeecCcccCCceeeeeEEeeccCCCCeeeEEEEECHHHcCCcchhhHHHHHH
Confidence 9762 22345678999999999999999998866533
No 93
>TIGR03245 arg_AOST_alph arginine/ornithine succinyltransferase, alpha subunit. In some bacteria, including Pseudomonas aeruginosa, the astB gene (arginine N-succinyltransferase) is replaced by tandem paralogs that form a heterodimer. This heterodimer from P. aeruginosa is characterized as arginine and ornithine N-2 succinyltransferase (AOST). Members of this protein family represent the less widespread paralog, designated AruI, or arginine/ornithine succinyltransferase, alpha subunit.
Probab=95.60 E-value=0.13 Score=45.90 Aligned_cols=88 Identities=15% Similarity=0.214 Sum_probs=57.8
Q ss_pred EecCCCCCHHHHHHHHHHcC--CCC--CcHHHHHHHHh---------------cceeEEEEEecccCCCCCCCCCCeEEE
Q 025840 106 FSSGGDVDVYELQTLCDKVG--WPR--RPLSKLAAALK---------------NSYLVATLHSIRKSPGSEGNEQRTLIG 166 (247)
Q Consensus 106 ~~~~~~~d~~~l~~l~~~~~--w~~--~~~~~~~~~~~---------------~~~~v~~~~~~~~~~~~~~~~~g~iVG 166 (247)
+|++...|.+.+.++....+ .+. .+.+.+.+.++ ..|.++.. ..+.|+|||
T Consensus 2 iRpv~~~Dl~aL~~LA~~sG~G~TsLP~d~~~L~~rI~~S~~sF~~~~~~~~~~~YlFVLE----------Dt~tg~vvG 71 (336)
T TIGR03245 2 VRPSRFADLPAIERLANESAIGVTSLPADRAKLGEKIAQSERSFAAEVSFVGEERYLFVLE----------DTETGKLLG 71 (336)
T ss_pred cccCccccHHHHHHHHHHcCCCcccCCCCHHHHHHHHHHHHHHHHhhcCCCCCccEEEEEE----------eCCCCcEEE
Confidence 46677889999999998854 332 22222222211 22333332 235799999
Q ss_pred EEEEE------------------------------------eCCCCcEEEEEEEECCCCCCCCHHHHHHHHHH
Q 025840 167 MARAT------------------------------------SDHAFNATIWDVLVDPSYQGQGLGKALVEKVV 203 (247)
Q Consensus 167 ~~~~~------------------------------------~~~~~~~~I~~l~V~p~~Rg~GlG~~Ll~~~~ 203 (247)
++.+. .+..+..+|..+.++|+||+-|.|+.|-+.-.
T Consensus 72 ts~I~a~vG~~~PfY~yr~~~~vhaS~~L~v~~~~~~L~l~nd~tG~sElctLfL~p~~R~~~~G~lLSr~Rf 144 (336)
T TIGR03245 72 TSSIVASAGYGEPFYSYRNDTLIHASRELKVNNKIHVLYMCHELTGSSLLCSFYVDPRLRKTEAAELLSRARL 144 (336)
T ss_pred EEeEEecccCCCCCEEEEcCceeecCcccCCccceeeEEeeccCCCCeeeEEEEECHHHcCCCchhHHHHHHH
Confidence 99762 22345678999999999999999998876543
No 94
>PF04377 ATE_C: Arginine-tRNA-protein transferase, C terminus; InterPro: IPR007472 Arginine-tRNA-protein transferase catalyses the post-translational conjugation of arginine to the N terminus of a protein. In eukaryotes, this functions as part of the N terminus rule pathway of protein degradation by conjugating a destabilising amino acid to the N-terminal aspartate or glutamate of a protein, targeting the protein for ubiquitin-dependent proteolysis. N-terminal cysteine is sometimes modified []. In Saccharomyces cerevisiae, Cys20, 23, 94 and/or 95 are thought to be important for activity []. Of these, only Cys 94 appears to be completely conserved in this family. This entry represents the C-terminal region of the enzyme arginine-tRNA-protein transferase, found in both eukaryotic and prokaryotic enzymes.; GO: 0004057 arginyltransferase activity, 0016598 protein arginylation
Probab=95.60 E-value=0.18 Score=38.89 Aligned_cols=57 Identities=16% Similarity=0.113 Sum_probs=47.2
Q ss_pred CCCeEEEEEEEEeCCCCcEEEEEEEECCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEE
Q 025840 160 EQRTLIGMARATSDHAFNATIWDVLVDPSYQGQGLGKALVEKVVRALLQKDIGNISLF 217 (247)
Q Consensus 160 ~~g~iVG~~~~~~~~~~~~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g~~~i~L~ 217 (247)
.+|++||.+.+..-.+..-.| ...-+|++..+++|+..+-.-++.|++.|...+.|.
T Consensus 46 ~~~kLiav~v~D~l~~glSaV-Y~fyDPd~~~~SlG~~~iL~eI~~a~~~~l~y~YLG 102 (128)
T PF04377_consen 46 LDGKLIAVAVVDILPDGLSAV-YTFYDPDYSKRSLGTYSILREIELARELGLPYYYLG 102 (128)
T ss_pred eCCeEEEEEEeecccchhhhe-eeeeCCCccccCcHHHHHHHHHHHHHHcCCCEEeeC
Confidence 399999998886544433344 345699999999999999999999999999999887
No 95
>cd04265 DUF619-NAGS-U DUF619 domain of various N-acetylglutamate Synthases (NAGS) of the urea (U) cycle of humans and fish. This family includes the DUF619 domain of various N-acetylglutamate synthases (NAGS) of the urea cycle found in humans and fish, the DUF619 domain of the NAGS of the fungal arginine-biosynthetic pathway (FABP), as well as the DUF619 domain present in C-terminal of a NAG kinase-like domain in a limited number of predicted NAGSs found in bacteria and Dictyostelium. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate. NAGS is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Domain architecture of ureogenic and fungal NAGS consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. The DUF619 domain function has yet to be characterized.
Probab=95.52 E-value=0.069 Score=39.31 Aligned_cols=79 Identities=20% Similarity=0.183 Sum_probs=54.5
Q ss_pred CCeEEEEEEEEeCC-CCcEEEEEEEECCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEE-eCHhhHHHH--HhCCCeecCC
Q 025840 161 QRTLIGMARATSDH-AFNATIWDVLVDPSYQGQGLGKALVEKVVRALLQKDIGNISLF-ADSQVVDFY--RNLGFEPDPE 236 (247)
Q Consensus 161 ~g~iVG~~~~~~~~-~~~~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g~~~i~L~-~n~~a~~fY--~k~GF~~~~~ 236 (247)
++..=|++.+.... ....+|..++|.++.||+|+|..|++.+.+... .-++-. .+....+.| +.-|+-..+
T Consensus 17 ~e~y~~~aivt~~~~~~~~yLdKfaV~~~~~g~gv~d~vf~~i~~d~~----~L~Wrsr~~n~~n~Wyf~~s~Gs~~~~- 91 (99)
T cd04265 17 SEGYNAAAIVTNEEVDGVPYLDKFAVSSSAQGEGTGEALWRRLRRDFP----KLFWRSRSTNPINPWYFKRCDGSFKNG- 91 (99)
T ss_pred eCCCcEEEEEeccCCCCceEEEEEEEchhhhhcChHHHHHHHHHhhCC----ceEEEeCCCCcccceEEEeeEEEEEcC-
Confidence 66666666666543 467899999999999999999999998887753 223322 244445555 446766643
Q ss_pred ceeeeEecC
Q 025840 237 GIKGMFWHP 245 (247)
Q Consensus 237 ~~~~~~w~~ 245 (247)
...++||.
T Consensus 92 -~~~lFW~G 99 (99)
T cd04265 92 -HWTVFWYG 99 (99)
T ss_pred -CeEEEeeC
Confidence 56677874
No 96
>TIGR03243 arg_catab_AOST arginine and ornithine succinyltransferase subunits. In many bacteria, the sole member of this protein family is arginine N-succinyltransferase (EC 2.3.1.109), the AstA protein of the arginine succinyltransferase (ast) pathway. However, in Pseudomonas aeruginosa and several other species, a tandem gene pair encodes alpha and beta subunits of a heterodimer that is designated arginine and ornithine succinyltransferase (AOST).
Probab=95.38 E-value=0.17 Score=45.14 Aligned_cols=88 Identities=19% Similarity=0.315 Sum_probs=57.9
Q ss_pred EecCCCCCHHHHHHHHHHcC--CCC--CcHHHHHHH-------H-------hcceeEEEEEecccCCCCCCCCCCeEEEE
Q 025840 106 FSSGGDVDVYELQTLCDKVG--WPR--RPLSKLAAA-------L-------KNSYLVATLHSIRKSPGSEGNEQRTLIGM 167 (247)
Q Consensus 106 ~~~~~~~d~~~l~~l~~~~~--w~~--~~~~~~~~~-------~-------~~~~~v~~~~~~~~~~~~~~~~~g~iVG~ 167 (247)
+|++...|.+.+.++....+ .+. .+.+.+.+. + +..|.++.. ..+.|+|||+
T Consensus 2 vRpv~~~Dl~aL~~LA~~sg~G~TsLP~d~~~L~~rI~~S~~sF~~~~~~~~~~YlFVLE----------D~~tg~vvGt 71 (335)
T TIGR03243 2 VRPVRTSDLDALMQLARESGIGLTSLPADRAALGSRIARSEKSFAGESTRGEEGYLFVLE----------DTETGTVAGV 71 (335)
T ss_pred cccCccccHHHHHHHHHHcCCCcccCCCCHHHHHHHHHHHHHHHhcccCCCCccEEEEEE----------eCCCCeEEEE
Confidence 46677889999999998854 222 122222222 2 123333332 2357999999
Q ss_pred EEEE------------------------------------eCCCCcEEEEEEEECCCCCCCCHHHHHHHHHH
Q 025840 168 ARAT------------------------------------SDHAFNATIWDVLVDPSYQGQGLGKALVEKVV 203 (247)
Q Consensus 168 ~~~~------------------------------------~~~~~~~~I~~l~V~p~~Rg~GlG~~Ll~~~~ 203 (247)
+.+. .+..+..+|..+.++|+||+-|.|+.|-+.-.
T Consensus 72 s~I~a~vG~~~PfY~yrv~~~vhaS~~L~v~~~~~~L~l~nd~tG~sElctLfL~p~~R~~~~G~LLSr~Rf 143 (335)
T TIGR03243 72 SAIEAAVGLDEPFYNYRVGTLVHASRELGVYNKIPTLTLSNDLTGSSELCTLFLDPDYRKGGNGRLLSRSRF 143 (335)
T ss_pred EeEEecccCCCCCEEEEcCceeecCcccCCccceeeEEeeccCCCCeeeEEEEECHHHcCCCchhhHHHHHH
Confidence 9762 22345678999999999999999998876543
No 97
>PF01853 MOZ_SAS: MOZ/SAS family; InterPro: IPR002717 Moz is a monocytic leukemia Zn_finger protein and the SAS protein from Saccharomyces cerevisiae (Baker's yeast) is involved in silencing the Hmr locus. These proteins were reported to be homologous to acetyltransferases [] but this similarity is not supported by standard sequence analysis.; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus; PDB: 3TO6_A 1MJA_A 1MJ9_A 3TO7_A 3TO9_A 1MJB_A 1FY7_A 2OZU_A 2RC4_A 2OU2_A ....
Probab=95.37 E-value=0.042 Score=44.97 Aligned_cols=50 Identities=18% Similarity=0.251 Sum_probs=38.9
Q ss_pred CCeEEEEEEEEeCCCCcEEEEEEEECCCCCCCCHHHHHHHHHHHHHHhCC
Q 025840 161 QRTLIGMARATSDHAFNATIWDVLVDPSYQGQGLGKALVEKVVRALLQKD 210 (247)
Q Consensus 161 ~g~iVG~~~~~~~~~~~~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g 210 (247)
+-.+|||..-.-.....-.+..|.|.|.||++|+|+.|++..-.-.+..|
T Consensus 64 g~h~vGyFSKEk~s~~~~NLsCIl~lP~yQrkGyG~~LI~fSY~LSr~e~ 113 (188)
T PF01853_consen 64 GFHIVGYFSKEKESWDNNNLSCILTLPPYQRKGYGRFLIDFSYELSRREG 113 (188)
T ss_dssp EEEEEEEEEEESS-TT-EEESEEEE-GGGTTSSHHHHHHHHHHHHHHHTT
T ss_pred cceeEEEEEEEecccCCeeEeehhhcchhhhcchhhhhhhhHHHHhhccC
Confidence 34699998876554445678899999999999999999999888777765
No 98
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=95.31 E-value=0.095 Score=48.76 Aligned_cols=126 Identities=18% Similarity=0.288 Sum_probs=88.6
Q ss_pred EEEecCCCCCHHHHHHHHHHcC-CC----CCcHHHHHHHHhcc-eeEEEEEecccCCCCCCCCCCeEEEEEEEEeCCCCc
Q 025840 104 IIFSSGGDVDVYELQTLCDKVG-WP----RRPLSKLAAALKNS-YLVATLHSIRKSPGSEGNEQRTLIGMARATSDHAFN 177 (247)
Q Consensus 104 i~~~~~~~~d~~~l~~l~~~~~-w~----~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~g~iVG~~~~~~~~~~~ 177 (247)
++++.....++..+..+..... +. +...++..+...+. ..++.+..-++. -|.-+||.+.+.-.. ..
T Consensus 414 l~vs~~de~~i~RIsQLtqkTNQFnlTtkRy~e~dV~~~~~~~~~li~sv~l~DKf------gDnGiigvviv~kk~-~~ 486 (574)
T COG3882 414 LTVSKFDEVNIPRISQLTQKTNQFNLTTKRYNEEDVRQMQEDPNFLIFSVSLKDKF------GDNGIIGVVIVEKKE-SE 486 (574)
T ss_pred EEEeeccccCcHHHHHHhhcccceeechhhhcHHHHHHHhhCCCeEEEEEEecccc------ccCceEEEEEEEecC-Ce
Confidence 5567777888999998887632 11 22344555544433 333333221111 145589998886543 46
Q ss_pred EEEEEEEECCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEe-----CHhhHHHHHhCCCeecCC
Q 025840 178 ATIWDVLVDPSYQGQGLGKALVEKVVRALLQKDIGNISLFA-----DSQVVDFYRNLGFEPDPE 236 (247)
Q Consensus 178 ~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g~~~i~L~~-----n~~a~~fY~k~GF~~~~~ 236 (247)
..|..+...-.-=|+++-.+||..+++.|...|+..+...- |.....||+++||+..++
T Consensus 487 w~IDt~lmSCRVlgRkvE~~l~~~~~e~A~~~gi~tir~~Y~pt~kN~pv~~FyE~mgf~l~~e 550 (574)
T COG3882 487 WFIDTFLMSCRVLGRKVEQRLMNSLEEQALSEGINTIRGYYIPTEKNAPVSDFYERMGFKLKGE 550 (574)
T ss_pred EEhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcceeeeEecccccCCcHHHHHHHhccccccc
Confidence 77888888888889999999999999999999998887772 778999999999996554
No 99
>PLN03238 probable histone acetyltransferase MYST; Provisional
Probab=94.69 E-value=0.076 Score=46.22 Aligned_cols=51 Identities=20% Similarity=0.245 Sum_probs=40.0
Q ss_pred CCCeEEEEEEEEeCCCCcEEEEEEEECCCCCCCCHHHHHHHHHHHHHHhCC
Q 025840 160 EQRTLIGMARATSDHAFNATIWDVLVDPSYQGQGLGKALVEKVVRALLQKD 210 (247)
Q Consensus 160 ~~g~iVG~~~~~~~~~~~~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g 210 (247)
++..+|||..=.-.....-.+..|.|.|.||++|+|+.|++..-.-.+..|
T Consensus 138 ~g~h~vGYFSKEK~s~~~nNLaCIltLPpyQrkGyG~~LI~fSYeLSr~Eg 188 (290)
T PLN03238 138 HGSHIVGYFSKEKVSAEDYNLACILTLPPYQRKGYGKFLISFAYELSKREG 188 (290)
T ss_pred CCcEEEEEeceeccccCCCcEEEEEecChhhhccHhHhHHHHHhHHhhccC
Confidence 356799998765433333568899999999999999999998887776655
No 100
>PF04768 DUF619: Protein of unknown function (DUF619); InterPro: IPR006855 This region of unknown function is found at the C terminus of Neurospora crassa acetylglutamate synthase (2.7.2.8 from EC). It is also found C-terminal to the amino acid kinase region in some fungal acetylglutamate kinase enzymes (IPR001048 from INTERPRO). These enzymes play a role in arginine biosynthesis.; PDB: 3S6K_A 4AB7_F 3ZZF_B 3ZZI_D 3ZZH_A 3ZZG_A 3S6G_Y 3S6H_A 3S7Y_A.
Probab=94.61 E-value=0.32 Score=39.39 Aligned_cols=120 Identities=18% Similarity=0.180 Sum_probs=80.7
Q ss_pred ecCCCC-CHHHHHHHHHHcCCCCCcHHHHHHHHhcceeEEEEEecccCCCCCCCCCCeEEEEEEEEe---C-CCCcEEEE
Q 025840 107 SSGGDV-DVYELQTLCDKVGWPRRPLSKLAAALKNSYLVATLHSIRKSPGSEGNEQRTLIGMARATS---D-HAFNATIW 181 (247)
Q Consensus 107 ~~~~~~-d~~~l~~l~~~~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~iVG~~~~~~---~-~~~~~~I~ 181 (247)
...... |.+.+.++.....-...+.+.+...+++....+.+ +|..-|.+.++. . ....+++.
T Consensus 26 ~s~~~~~d~~kL~~ll~~sf~~~~~v~~yl~~l~~~~~~iy~-------------d~~y~~~AIVt~e~~~~~~~v~yLd 92 (170)
T PF04768_consen 26 SSLSEFVDLDKLRALLERSFGGKLDVDHYLDRLNNRLFKIYV-------------DEDYEGAAIVTPEGPDSNGPVPYLD 92 (170)
T ss_dssp SSCCCSS-HHHHHHHHHHHSTSSSBHTTHHHHHHTS-SEEEE-------------ETTSSEEEEEEEE-SCTCTSEEEEE
T ss_pred cCccccCCHHHHHHHHHhcccccccHHHHHHHhhccceEEEE-------------eCCceEEEEEEecCCCCCCCCeEEE
Confidence 333455 89999999988663446666777777766655554 666666666654 2 23479999
Q ss_pred EEEECCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEE-eCHhhHHHH--HhCCCeecCCceeeeEecC
Q 025840 182 DVLVDPSYQGQGLGKALVEKVVRALLQKDIGNISLF-ADSQVVDFY--RNLGFEPDPEGIKGMFWHP 245 (247)
Q Consensus 182 ~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g~~~i~L~-~n~~a~~fY--~k~GF~~~~~~~~~~~w~~ 245 (247)
.++|.+..||.|++..+...+.+.... -+|-. .+....++| +.-|+-. .....++||.
T Consensus 93 KFav~~~~~g~gv~D~vf~~i~~d~p~----L~Wrsr~~n~~~~Wyf~rs~G~~~--~~~~~lFw~G 153 (170)
T PF04768_consen 93 KFAVSKSAQGSGVADNVFNAIRKDFPK----LFWRSREDNPNNKWYFERSDGSFK--RNGWVLFWYG 153 (170)
T ss_dssp EEEE-HHHHHTTHHHHHHHHHHHH-SS----EEEEEETT-TTHHHHHHH-SEEEE--ETTEEEEEES
T ss_pred EEEecchhhhcCHHHHHHHHHHHhccc----eEEEecCCCCcccEEEEeeEEEEE--CCCeEEEEcC
Confidence 999999999999999999998666522 33333 466677888 5588887 4456788875
No 101
>KOG2036 consensus Predicted P-loop ATPase fused to an acetyltransferase [General function prediction only]
Probab=93.93 E-value=0.13 Score=49.81 Aligned_cols=32 Identities=31% Similarity=0.422 Sum_probs=28.4
Q ss_pred EEEEEEEECCCCCCCCHHHHHHHHHHHHHHhC
Q 025840 178 ATIWDVLVDPSYQGQGLGKALVEKVVRALLQK 209 (247)
Q Consensus 178 ~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~ 209 (247)
+.|-.|+|||+|+++|+|++-++-+.++...+
T Consensus 615 aRIVRIAvhP~y~~MGYGsrAvqLL~~y~eG~ 646 (1011)
T KOG2036|consen 615 ARIVRIAVHPEYQKMGYGSRAVQLLTDYFEGK 646 (1011)
T ss_pred ceEEEEEeccchhccCccHHHHHHHHHHHhcc
Confidence 67889999999999999999999888887654
No 102
>COG5630 ARG2 Acetylglutamate synthase [Amino acid transport and metabolism]
Probab=93.58 E-value=0.31 Score=43.99 Aligned_cols=120 Identities=18% Similarity=0.179 Sum_probs=77.3
Q ss_pred CCCCHHHHHHHHHHcCCCCCcHHHHHHHHhcceeEEEEEecccCCCCCCCCCCeEEEEEEEEeCC---CCcEEEEEEEEC
Q 025840 110 GDVDVYELQTLCDKVGWPRRPLSKLAAALKNSYLVATLHSIRKSPGSEGNEQRTLIGMARATSDH---AFNATIWDVLVD 186 (247)
Q Consensus 110 ~~~d~~~l~~l~~~~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~iVG~~~~~~~~---~~~~~I~~l~V~ 186 (247)
...|+..+..+.+...-..-+...+...+.+...-+.+ .|.--|.+.++..+ ....|+..++|.
T Consensus 343 ~~Ldl~r~q~LI~~SFkRTLd~h~y~~r~~~~La~~iV-------------sgdY~g~aIlTyegs~~~~vpYLDKfAVl 409 (495)
T COG5630 343 KDLDLPRLQHLIQSSFKRTLDPHYYETRINTPLARAIV-------------SGDYRGAAILTYEGSGENNVPYLDKFAVL 409 (495)
T ss_pred hhcCcHHHHHHHHHHHhhccCHHHHHHhccCcceeEEe-------------eccceeeEEEEeeccCCCCCcceeeeecc
Confidence 35566677777666443333444555556666555544 56666666665543 246899999999
Q ss_pred CCCCC-CCHHHHHHHHHHHHHHhCCCCEEEEE-eCHhhHHHH--HhCCCeecCCceeeeEecC
Q 025840 187 PSYQG-QGLGKALVEKVVRALLQKDIGNISLF-ADSQVVDFY--RNLGFEPDPEGIKGMFWHP 245 (247)
Q Consensus 187 p~~Rg-~GlG~~Ll~~~~~~a~~~g~~~i~L~-~n~~a~~fY--~k~GF~~~~~~~~~~~w~~ 245 (247)
++.|| -|||.++..-+.+.....= +|=. -|..+.++| +..|+-......--++|+.
T Consensus 410 ~~aQGs~gisd~vfniM~e~fP~eL---~WRSR~~N~vNkwYf~rSvg~lk~~~~~wKlFw~G 469 (495)
T COG5630 410 DDAQGSEGISDAVFNIMREEFPNEL---FWRSRHNNQVNKWYFARSVGYLKQKQDHWKLFWNG 469 (495)
T ss_pred ccccccchHHHHHHHHHHHhCcHhh---hhhhcccCcchheeeehhhehhhccCCcceEEecC
Confidence 99999 9999999988877664221 1111 255566666 6677766655556677876
No 103
>PLN03239 histone acetyltransferase; Provisional
Probab=93.25 E-value=0.15 Score=45.65 Aligned_cols=51 Identities=14% Similarity=0.131 Sum_probs=39.2
Q ss_pred CCCeEEEEEEEEeCCCCcEEEEEEEECCCCCCCCHHHHHHHHHHHHHHhCC
Q 025840 160 EQRTLIGMARATSDHAFNATIWDVLVDPSYQGQGLGKALVEKVVRALLQKD 210 (247)
Q Consensus 160 ~~g~iVG~~~~~~~~~~~~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g 210 (247)
++-.+|||..=.-.....-.+..|.|.|.||++|+|+.|++..-.-.+..|
T Consensus 196 ~g~h~vGYFSKEK~s~~~~NLaCIltLPpyQrkGyG~lLI~fSYeLSr~Eg 246 (351)
T PLN03239 196 RGFHPVGYYSKEKYSDVGYNLACILTFPAHQRKGYGRFLIAFSYELSKKEE 246 (351)
T ss_pred CceEEEEEeeecccCCCCCceEEEEecChhhhcchhhhhHhhhhHhhhhcC
Confidence 355799998764433333468899999999999999999998877776655
No 104
>KOG2779 consensus N-myristoyl transferase [Lipid transport and metabolism]
Probab=93.14 E-value=0.47 Score=42.50 Aligned_cols=52 Identities=15% Similarity=0.211 Sum_probs=42.7
Q ss_pred CCCeEEEEEEEEeC-----C--CCcEEEEEEEECCCCCCCCHHHHHHHHHHHHHHhCCC
Q 025840 160 EQRTLIGMARATSD-----H--AFNATIWDVLVDPSYQGQGLGKALVEKVVRALLQKDI 211 (247)
Q Consensus 160 ~~g~iVG~~~~~~~-----~--~~~~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g~ 211 (247)
.++++|||+...+. + ...++|..++||.+.|+++++--|++++-+++.-.|+
T Consensus 143 ~s~kLVaFIsaiP~~irvrdk~vk~veINFLCVHKkLRSKRlaPvLIrEITRRvnl~gI 201 (421)
T KOG2779|consen 143 SSKKLVAFISAIPATIRVRDKVVKMVEINFLCVHKKLRSKRLAPVLIREITRRVNLEGI 201 (421)
T ss_pred cCCceEEEEeccccEEEEccceeeeeeEEEEEEehhhhccccccHHHHHHHHHhhhhhh
Confidence 47899999976421 1 2358999999999999999999999999999976664
No 105
>TIGR03019 pepcterm_femAB FemAB-related protein, PEP-CTERM system-associated. Members of this protein family are found always as part of extended exopolysaccharide biosynthesis loci in bacteria. In nearly every case, these loci contain determinants for the processing of the PEP-CTERM proposed C-terminal protein sorting signal. This family shows remote, local sequence similarity to the FemAB protein family (see pfam02388), whose members
Probab=93.08 E-value=1.3 Score=39.36 Aligned_cols=77 Identities=10% Similarity=0.080 Sum_probs=59.3
Q ss_pred CCeEEEEEEEEeCCCCcEEEEEEEECCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEe---CHhhHHHHHhCCCeecCCc
Q 025840 161 QRTLIGMARATSDHAFNATIWDVLVDPSYQGQGLGKALVEKVVRALLQKDIGNISLFA---DSQVVDFYRNLGFEPDPEG 237 (247)
Q Consensus 161 ~g~iVG~~~~~~~~~~~~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g~~~i~L~~---n~~a~~fY~k~GF~~~~~~ 237 (247)
+|++||.+.+...++ ..+....+.++++++.+-+..|.-+++++|.++|++...+.. +....+|=++.||+++...
T Consensus 204 ~g~~va~~l~~~~~~-~~~~~~~g~~~~~~~~~~~~lL~w~~i~~a~~~G~~~fDfG~s~~~~G~~~FK~~~G~~~~~l~ 282 (330)
T TIGR03019 204 DGVVASAVLSFYFRD-EVLPYYAGGLREARDVAANDLMYWELMRRACERGLRVFDFGRSKRGTGPFKFKKNWGFEPQPLH 282 (330)
T ss_pred CCCEEEEEEEEEeCC-EEEEEeccChHHHHhhChHHHHHHHHHHHHHHCCCcEEEcCCCCCCCccHHHHhcCCCeeccce
Confidence 888888876654433 333335678899999999999999999999999999888774 3346666688999987654
Q ss_pred e
Q 025840 238 I 238 (247)
Q Consensus 238 ~ 238 (247)
.
T Consensus 283 ~ 283 (330)
T TIGR03019 283 Y 283 (330)
T ss_pred E
Confidence 3
No 106
>PTZ00064 histone acetyltransferase; Provisional
Probab=92.63 E-value=0.18 Score=47.07 Aligned_cols=51 Identities=24% Similarity=0.340 Sum_probs=39.6
Q ss_pred CCCeEEEEEEEEeCCCCcEEEEEEEECCCCCCCCHHHHHHHHHHHHHHhCC
Q 025840 160 EQRTLIGMARATSDHAFNATIWDVLVDPSYQGQGLGKALVEKVVRALLQKD 210 (247)
Q Consensus 160 ~~g~iVG~~~~~~~~~~~~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g 210 (247)
++-.+|||..=.-.....--+..|.|.|.||++|+|+.|++..-.-.+..|
T Consensus 367 ~G~HiVGYFSKEK~S~~~nNLACILtLPpyQRKGYGklLIdfSYeLSrrEg 417 (552)
T PTZ00064 367 EGCHIVGYFSKEKVSLLHYNLACILTLPCYQRKGYGKLLVDLSYKLSLKEG 417 (552)
T ss_pred CCcEEEEEecccccCcccCceEEEEecchhhhcchhhhhhhhhhhhhhhcC
Confidence 356899998754333333468899999999999999999998887776655
No 107
>COG2401 ABC-type ATPase fused to a predicted acetyltransferase domain [General function prediction only]
Probab=92.02 E-value=0.11 Score=47.77 Aligned_cols=57 Identities=25% Similarity=0.430 Sum_probs=45.0
Q ss_pred EEEEEEEECCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEE-----e---CHhhHHHHHhCCCeec
Q 025840 178 ATIWDVLVDPSYQGQGLGKALVEKVVRALLQKDIGNISLF-----A---DSQVVDFYRNLGFEPD 234 (247)
Q Consensus 178 ~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g~~~i~L~-----~---n~~a~~fY~k~GF~~~ 234 (247)
+.|..+.|||+||+-|||.+-+..+.++..++-+..+.-. + -..-..|+++.||+..
T Consensus 242 ariarvvvhpdyr~dglg~~sv~~a~ewI~eRriPEmr~rkHlvetiaqmarynpffe~~gfkyl 306 (593)
T COG2401 242 ARIARVVVHPDYRADGLGQLSVIAALEWIIERRIPEMRPRKHLVETIAQMARYNPFFEKVGFKYL 306 (593)
T ss_pred hheeEEEeccccccCccchhHHHHHHHHHHHhhChhhhhhhhHHHHHHHHHhcCchhhhhceeee
Confidence 6799999999999999999999999999998765544332 1 1123468999999974
No 108
>cd04266 DUF619-NAGS-FABP DUF619 domain of N-acetylglutamate Synthase of the fungal arginine-biosynthetic pathway. DUF619-NAGS-FABP: This family includes the DUF619 domain of N-acetylglutamate synthase (NAGS) of the fungal arginine-biosynthetic pathway (FABP). This NAGS (also known as arginine-requiring protein 2 or ARG2) consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. NAGS catalyzes the formation of NAG from acetylcoenzyme A and L-glutamate. The DUF619 domain, yet to be characterized, is predicted to function in NAGS association in fungi.
Probab=91.69 E-value=1.3 Score=33.14 Aligned_cols=82 Identities=22% Similarity=0.231 Sum_probs=57.0
Q ss_pred CCeEEEEEEEEeCC------CCcEEEEEEEECCCCCC-CCHHHHHHHHHHHHHHhCCCCEEEEE-eCHhhHHHH--HhCC
Q 025840 161 QRTLIGMARATSDH------AFNATIWDVLVDPSYQG-QGLGKALVEKVVRALLQKDIGNISLF-ADSQVVDFY--RNLG 230 (247)
Q Consensus 161 ~g~iVG~~~~~~~~------~~~~~I~~l~V~p~~Rg-~GlG~~Ll~~~~~~a~~~g~~~i~L~-~n~~a~~fY--~k~G 230 (247)
+|..-|.+.++... ...+++..++|.+..|| .|++..+.+.+.+.. ...-++-. .+....+.| +..|
T Consensus 17 ~~~y~~~AIvt~e~~~~~~~~~v~yLdKFav~~~~~gl~gv~D~vf~~m~~~f---p~~L~Wrsr~~n~~n~Wyfers~G 93 (108)
T cd04266 17 AGDYEGAAILTWEGPDGSTPEKIAYLDKFAVLPKAQGSDGIADILFNAMLDGF---PNELIWRSRKDNPVNKWYFERSVG 93 (108)
T ss_pred eCCCcEEEEEecCCCCccCCCCceEEEEEEEccccccccchHHHHHHHHHHcC---CCceEEEeCCCCcccceEEeeeeE
Confidence 66666666665432 45789999999999997 899999999888732 11134432 355555666 5578
Q ss_pred CeecCCceeeeEecC
Q 025840 231 FEPDPEGIKGMFWHP 245 (247)
Q Consensus 231 F~~~~~~~~~~~w~~ 245 (247)
+-........++||.
T Consensus 94 s~~~~~~~w~lFW~G 108 (108)
T cd04266 94 VLKLSGSQWKLFWTG 108 (108)
T ss_pred EEEecCCCeEEEecC
Confidence 877655667788874
No 109
>PRK14852 hypothetical protein; Provisional
Probab=91.48 E-value=1.4 Score=44.96 Aligned_cols=61 Identities=16% Similarity=0.197 Sum_probs=53.5
Q ss_pred CcEEEEEEEECCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEeCHhhHHHHHh-CCCeecCC
Q 025840 176 FNATIWDVLVDPSYQGQGLGKALVEKVVRALLQKDIGNISLFADSQVVDFYRN-LGFEPDPE 236 (247)
Q Consensus 176 ~~~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g~~~i~L~~n~~a~~fY~k-~GF~~~~~ 236 (247)
..++++.++++|+.|.+-+=-.|++.+..++...+++.+.+.+|++=..||++ +||+..++
T Consensus 120 ~v~EvtrLa~d~~~~~~~l~~~l~~~~~~y~~~~~~dd~~i~VnPkH~~FY~r~l~f~~ig~ 181 (989)
T PRK14852 120 NVVEVGALATQYSRRWTNLMVFLAKAMFQYSMMSEVDDILVTVNPKHVKFYTDIFLFKPFGE 181 (989)
T ss_pred eEEeeehheechhhcccchhHHHHHHHHHHHHHcCCCeEEEEECcchHHHHHHHhCCccccc
Confidence 35889999999988887777788888888888889999999999999999986 99999886
No 110
>PLN00104 MYST -like histone acetyltransferase; Provisional
Probab=91.47 E-value=0.18 Score=46.74 Aligned_cols=51 Identities=18% Similarity=0.229 Sum_probs=38.8
Q ss_pred CCCeEEEEEEEEeCCCCcEEEEEEEECCCCCCCCHHHHHHHHHHHHHHhCC
Q 025840 160 EQRTLIGMARATSDHAFNATIWDVLVDPSYQGQGLGKALVEKVVRALLQKD 210 (247)
Q Consensus 160 ~~g~iVG~~~~~~~~~~~~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g 210 (247)
++-.+|||..=.-.....-.+..|.|.|.||++|+|+.|++..-.-.+..|
T Consensus 289 ~g~h~vGyFSKEk~s~~~~NLaCIltlP~yQrkGyG~~LI~~SYeLSr~eg 339 (450)
T PLN00104 289 RGCHMVGYFSKEKHSEEDYNLACILTLPPYQRKGYGKFLIAFSYELSKREG 339 (450)
T ss_pred CCcEEEEEecccccCcCCCceEEEEecchhhhcchhheehhheehhhhccC
Confidence 355899998764433333468899999999999999999987776665554
No 111
>KOG2747 consensus Histone acetyltransferase (MYST family) [Chromatin structure and dynamics]
Probab=90.83 E-value=0.17 Score=45.98 Aligned_cols=48 Identities=21% Similarity=0.269 Sum_probs=34.6
Q ss_pred CCCeEEEEEEEEeCCCCcEEEEEEEECCCCCCCCHHHHHHHHHHHHHHh
Q 025840 160 EQRTLIGMARATSDHAFNATIWDVLVDPSYQGQGLGKALVEKVVRALLQ 208 (247)
Q Consensus 160 ~~g~iVG~~~~~~~~~~~~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~ 208 (247)
+.| .|||..=.-.....-.+..|.|.|.||++|+|+.|++.--.--+.
T Consensus 244 ~~G-~VGYFSKEK~s~~~yNlaCILtLPpyQRkGYGklLIdFSYeLSr~ 291 (396)
T KOG2747|consen 244 SYG-CVGYFSKEKESSENYNLACILTLPPYQRKGYGKLLIDFSYELSRR 291 (396)
T ss_pred Ccc-eeeeeccccccccccceeeeeecChhhhcccchhhhhhhhhhhcc
Confidence 345 588776543333345688899999999999999999876555443
No 112
>COG3138 AstA Arginine/ornithine N-succinyltransferase beta subunit [Amino acid transport and metabolism]
Probab=90.73 E-value=1.1 Score=39.05 Aligned_cols=86 Identities=22% Similarity=0.365 Sum_probs=54.1
Q ss_pred EEecCCCCCHHHHHHHHHHcC--CCC--CcHHHHHHHHh--------------cceeEEEEEecccCCCCCCCCCCeEEE
Q 025840 105 IFSSGGDVDVYELQTLCDKVG--WPR--RPLSKLAAALK--------------NSYLVATLHSIRKSPGSEGNEQRTLIG 166 (247)
Q Consensus 105 ~~~~~~~~d~~~l~~l~~~~~--w~~--~~~~~~~~~~~--------------~~~~v~~~~~~~~~~~~~~~~~g~iVG 166 (247)
..|++...|.+.+.++....+ .+. .+.+.+...+. .++.++.. ..+.|++||
T Consensus 3 vvRP~~~aDl~al~~LA~~sg~G~TsLP~de~~L~~Ri~~se~sf~~~~~~ge~~Y~fVLE----------DsetG~VvG 72 (336)
T COG3138 3 VVRPVERADLEALMELAVKTGVGLTSLPADEATLRARIERSEKSFQGELPPGEAGYLFVLE----------DSETGTVVG 72 (336)
T ss_pred ccccccccCHHHHHHHHHhcCCCcccCCCCHHHHHHHHHHHHHHHhcccCCCCccEEEEEE----------ecCCceEEe
Confidence 456777889999999888753 333 12222222211 12333332 125899999
Q ss_pred EEEEE------------------------------------eCCCCcEEEEEEEECCCCCCCCHHHHHHH
Q 025840 167 MARAT------------------------------------SDHAFNATIWDVLVDPSYQGQGLGKALVE 200 (247)
Q Consensus 167 ~~~~~------------------------------------~~~~~~~~I~~l~V~p~~Rg~GlG~~Ll~ 200 (247)
++.+. .+..++.++..++++|+||.-|-|+.|-+
T Consensus 73 ~saI~a~vGl~~PfYsyRv~tlvhaS~~L~v~~~i~~L~L~Nd~TG~SEl~sLFl~pd~Rkg~nG~Llsr 142 (336)
T COG3138 73 ISAIEAAVGLNDPFYSYRVGTLVHASPELNVYNEIPTLFLSNDLTGNSELCTLFLDPDWRKGGNGRLLSK 142 (336)
T ss_pred EEEEEEeeccCCccceeeeeeeeecCccccccccceeEEEeccCcCchhhhheeecHHHhcccchhhhhh
Confidence 98762 12344567888999999999999987654
No 113
>PF02474 NodA: Nodulation protein A (NodA); InterPro: IPR003484 Rhizobial nodulation (Nod) factors are signalling molecules secreted by root-nodulating rhizobia in response to flavanoids excreted by the host plant. They induce various symbiotic responses on the roots of the leguminous host plant at low concentrations, and are required for successful infection. Rhizobial Nod factors are lipo-chitooligosaccharides carrying various substituents which are important determinants of host specificity []. NodA is an N-acyl transferase which specifies the transfer of an acyl chain to the oligosaccharide backbone of Nod factor. Allelic variation of the nodA gene can contribute to the determination of host range [].; GO: 0016746 transferase activity, transferring acyl groups
Probab=90.61 E-value=0.61 Score=37.63 Aligned_cols=53 Identities=13% Similarity=0.062 Sum_probs=46.1
Q ss_pred cEEEEEEEECCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEeCHhhHHHHHhCC
Q 025840 177 NATIWDVLVDPSYQGQGLGKALVEKVVRALLQKDIGNISLFADSQVVDFYRNLG 230 (247)
Q Consensus 177 ~~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g~~~i~L~~n~~a~~fY~k~G 230 (247)
.+++...+|+|+.+|.||+..| +.+.-.+++.|..-..-.+..+..+.+++++
T Consensus 85 VaElGLygVRpDLEGlGi~hs~-r~m~PvLq~LgVPF~FGtVR~al~~Hv~R~~ 137 (196)
T PF02474_consen 85 VAELGLYGVRPDLEGLGISHSM-RVMYPVLQELGVPFGFGTVRHALRNHVERLC 137 (196)
T ss_pred EEEEEEEEeeccccccccchhh-hhhhhHHHhcCCCeecccchHHHHHHHHHHh
Confidence 4789999999999999999976 6777888888998888888888888888876
No 114
>KOG2696 consensus Histone acetyltransferase type b catalytic subunit [Chromatin structure and dynamics]
Probab=90.54 E-value=0.74 Score=41.46 Aligned_cols=54 Identities=26% Similarity=0.454 Sum_probs=37.6
Q ss_pred EEEEEEEEeC----CCCcEEEEEEEECCCCCCCCHHHHHHHHHHHHHHhC-CCCEEEEE
Q 025840 164 LIGMARATSD----HAFNATIWDVLVDPSYQGQGLGKALVEKVVRALLQK-DIGNISLF 217 (247)
Q Consensus 164 iVG~~~~~~~----~~~~~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~-g~~~i~L~ 217 (247)
.+|+..+... +.....|..+.+.|.|||+|+|..|++.+.+..... .+--++++
T Consensus 200 ~~gy~tiyk~y~yid~~R~RiSQmlilpPfq~~Glgs~l~E~i~r~~~~~p~v~DiTVE 258 (403)
T KOG2696|consen 200 YVGYYTIYKFYEYIDRIRPRISQMLILPPFQGKGLGSQLYEAIARDYLEEPTVLDITVE 258 (403)
T ss_pred eeeeEEEeehhhhhhhhhhhhheeEEeccccCCchHHHHHHHHHHhhccCCceeEEEec
Confidence 5666555321 234578889999999999999999999999666543 33334443
No 115
>PF12261 T_hemolysin: Thermostable hemolysin; InterPro: IPR022050 This family of proteins is found in bacteria. Proteins in this family are typically between 200 and 228 amino acids in length. T_hemolysin is a pore-forming toxin of bacteria, able to lyse erythrocytes from a number of mammalian species.
Probab=88.45 E-value=2.9 Score=34.11 Aligned_cols=55 Identities=18% Similarity=0.302 Sum_probs=47.5
Q ss_pred cEEEEEEEECCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEeCHhhHHHHHhCCCeecC
Q 025840 177 NATIWDVLVDPSYQGQGLGKALVEKVVRALLQKDIGNISLFADSQVVDFYRNLGFEPDP 235 (247)
Q Consensus 177 ~~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g~~~i~L~~n~~a~~fY~k~GF~~~~ 235 (247)
-.+|+.++.. +.|.++.|+..+...+...|++.+..++....++++.|+|.....
T Consensus 87 IvEvGnLAs~----~~g~~~~l~~~l~~~L~~~g~~w~vfTaT~~lr~~~~rlgl~~~~ 141 (179)
T PF12261_consen 87 IVEVGNLASF----SPGAARLLFAALAQLLAQQGFEWVVFTATRQLRNLFRRLGLPPTV 141 (179)
T ss_pred eeEeechhhc----CcccHHHHHHHHHHHHHHCCCCEEEEeCCHHHHHHHHHcCCCcee
Confidence 3677777654 589999999999999999999988888899999999999998743
No 116
>PF09390 DUF1999: Protein of unknown function (DUF1999); InterPro: IPR018987 This family contains a putative Fe-S binding reductase (Q72J89 from SWISSPROT) whose structure adopts an alpha and beta fold. ; PDB: 2D4O_A 2D4P_A.
Probab=88.10 E-value=11 Score=29.56 Aligned_cols=119 Identities=18% Similarity=0.184 Sum_probs=66.8
Q ss_pred EEecCCCCCHHHHHHHHHHc-----------------CCCCCcHHHHHHHHhcceeEEEEEecccCCCCCCCCCCeEEEE
Q 025840 105 IFSSGGDVDVYELQTLCDKV-----------------GWPRRPLSKLAAALKNSYLVATLHSIRKSPGSEGNEQRTLIGM 167 (247)
Q Consensus 105 ~~~~~~~~d~~~l~~l~~~~-----------------~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~iVG~ 167 (247)
.|+.....|.+.++.+-... +.-..++..++-....+..+++. .++|++.||
T Consensus 2 ~yR~f~e~D~~aL~ald~a~qr~~dP~fd~lperer~gr~~tSl~Alrfy~RsgHSFvA~-----------~e~~~~~Gf 70 (161)
T PF09390_consen 2 RYRPFTEPDFAALQALDLAAQRRTDPAFDGLPEREREGRLSTSLAALRFYERSGHSFVAE-----------DEGGELQGF 70 (161)
T ss_dssp EEE---GGGHHHHHHC--------------------STTS---HHHHHHHHCCS--EEEE------------ETTEEEEE
T ss_pred cccccCcccHHHHHHHhhhccccccccccccccccccccccCCHHHhhhhhccCCcEEEE-----------ccCCceeee
Confidence 56777788888888773221 11112344444444555555554 148999999
Q ss_pred EEE---EeCCCCcEEEEEEEECCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEeCHhhHHHHHhCCCeecC
Q 025840 168 ARA---TSDHAFNATIWDVLVDPSYQGQGLGKALVEKVVRALLQKDIGNISLFADSQVVDFYRNLGFEPDP 235 (247)
Q Consensus 168 ~~~---~~~~~~~~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g~~~i~L~~n~~a~~fY~k~GF~~~~ 235 (247)
+.. +........+..|.+.|. +......-|++.+.+-+-..|.-.+.+..++....--+.-||...+
T Consensus 71 vLAQaVWQGdrptVlV~ri~~~~~-~~~~~~~GLLrAvvKSAYDa~VYEv~l~l~p~l~~A~~a~~~~~~~ 140 (161)
T PF09390_consen 71 VLAQAVWQGDRPTVLVRRILLAPG-EPEEVYEGLLRAVVKSAYDAGVYEVHLHLDPELEAAARAEGFRLGG 140 (161)
T ss_dssp EEEEEEE-SSSEEEEEEEE---EE-SSHHHHHHHHHHHHHHHHHTT-SEEEE---THHHHHHHHTT----S
T ss_pred eehhHHhcCCCceEEEEEeecCCC-CcHHHHHHHHHHHHHhhhccceEEEEeeCCHHHHHHHhhcccccCC
Confidence 975 333344567777755554 4567888999999999999999999999888777777888888654
No 117
>KOG4601 consensus Uncharacterized conserved protein [Function unknown]
Probab=85.27 E-value=4.5 Score=34.26 Aligned_cols=72 Identities=18% Similarity=0.266 Sum_probs=46.4
Q ss_pred CCeEEEEEEE------EeCCC------CcEEEEEEEECCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEe-CHhhHHHHH
Q 025840 161 QRTLIGMARA------TSDHA------FNATIWDVLVDPSYQGQGLGKALVEKVVRALLQKDIGNISLFA-DSQVVDFYR 227 (247)
Q Consensus 161 ~g~iVG~~~~------~~~~~------~~~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g~~~i~L~~-n~~a~~fY~ 227 (247)
.+.+.|++.+ ..|.. ...-|-+++||+.-|++|.|+.|++.+++.=. -....+.++- .....+|.+
T Consensus 80 ks~l~GllKVG~KkLfl~D~~~~~ye~e~lcILDFyVheS~QR~G~G~~lfdyMl~kE~-vephQ~a~DrPS~kLl~Fm~ 158 (264)
T KOG4601|consen 80 KSILKGLLKVGYKKLFLTDNEQNQYEEEALCILDFYVHESEQRSGNGFKLFDYMLKKEN-VEPHQCAFDRPSAKLLQFME 158 (264)
T ss_pred chheeeeehccceeEEEeccHhhhhccCCceEEEEEeehhhhhcCchHHHHHHHHHhcC-CCchheeccChHHHHHHHHH
Confidence 3678888754 22221 22457799999999999999999999886531 1223344432 345667775
Q ss_pred h-CCCee
Q 025840 228 N-LGFEP 233 (247)
Q Consensus 228 k-~GF~~ 233 (247)
| .|-+.
T Consensus 159 khYgl~~ 165 (264)
T KOG4601|consen 159 KHYGLKD 165 (264)
T ss_pred HhcCccc
Confidence 4 66554
No 118
>PF04339 DUF482: Protein of unknown function, DUF482; InterPro: IPR007434 This family contains several proteins of uncharacterised function.
Probab=84.71 E-value=27 Score=31.88 Aligned_cols=117 Identities=13% Similarity=0.085 Sum_probs=72.8
Q ss_pred CCCCCHHHHHHHHHHc---CCCCC--c---HHHHHHHHhcceeEEEEEecccCCCCCCCCCCeEEEEEEEEeCCCCcEEE
Q 025840 109 GGDVDVYELQTLCDKV---GWPRR--P---LSKLAAALKNSYLVATLHSIRKSPGSEGNEQRTLIGMARATSDHAFNATI 180 (247)
Q Consensus 109 ~~~~d~~~l~~l~~~~---~w~~~--~---~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~iVG~~~~~~~~~~~~~I 180 (247)
.++.+++.+..+|... .|... . .+.+.+.+.+...++.++ .+|++||+..+..+++ ..+=
T Consensus 210 i~~~~~~~f~~~Y~~Ty~k~~~~~yLt~~FF~~l~~~m~~~~~l~~A~-----------~~g~~Va~aL~l~~~~-~LyG 277 (370)
T PF04339_consen 210 ITDEDWDRFYRLYQNTYAKRWGRPYLTREFFEQLAETMPEQVVLVVAR-----------RDGQPVAFALCLRGDD-TLYG 277 (370)
T ss_pred CCHHHHHHHHHHHHHHHHhhCCChhhcHHHHHHHHHhCcCCEEEEEEE-----------ECCeEEEEEEEEEeCC-EEEE
Confidence 3455677777777763 24332 2 234444555555555554 3999999998876533 4555
Q ss_pred EEEEECCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEeCHhhHHHHHhCCCeecCCceeee
Q 025840 181 WDVLVDPSYQGQGLGKALVEKVVRALLQKDIGNISLFADSQVVDFYRNLGFEPDPEGIKGM 241 (247)
Q Consensus 181 ~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g~~~i~L~~n~~a~~fY~k~GF~~~~~~~~~~ 241 (247)
...+...++.+.-. ....-+.+++|.++|++.+...+.-. .+ ...||+++.+.-...
T Consensus 278 RYwG~~~~~~~LHF-e~cYYq~Ie~aI~~Gl~~f~~GaqGE-HK--~~RGf~P~~t~S~H~ 334 (370)
T PF04339_consen 278 RYWGCDEEIPFLHF-ELCYYQGIEYAIEHGLRRFEPGAQGE-HK--IARGFEPVPTYSAHW 334 (370)
T ss_pred eeecccccccCcch-HHHHHHHHHHHHHcCCCEEECCcchh-HH--HHcCCccccceeeee
Confidence 56666666655442 23356789999999999877765431 22 468999987644433
No 119
>PF11124 Pho86: Inorganic phosphate transporter Pho86; InterPro: IPR024297 Pho86p is an ER protein which is produced in response to phosphate starvation. It is essential for growth when phosphate levels are limiting []. Pho86p is also involved in the regulation of Pho84p, a high-affinity phosphate transporter, which is localised to the endoplasmic reticulum (ER) in low phosphate medium. When the level of phosphate increases Pho84p is transported to the vacuole. Pho86p is required for packaging of Pho84p in to COPII vesicles [].
Probab=84.19 E-value=6.1 Score=34.82 Aligned_cols=75 Identities=19% Similarity=0.244 Sum_probs=58.4
Q ss_pred CCeEEEEEEEEeCC------CCcEEEEEEEECCCCCCCCHHHHHHHHHHHHHHhC------C--CCEEEEE--e---CHh
Q 025840 161 QRTLIGMARATSDH------AFNATIWDVLVDPSYQGQGLGKALVEKVVRALLQK------D--IGNISLF--A---DSQ 221 (247)
Q Consensus 161 ~g~iVG~~~~~~~~------~~~~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~------g--~~~i~L~--~---n~~ 221 (247)
.+.+|+.+.+..+. .-...|..+.|+.-|..-|+=..|++.++-+.++. + -..|.+. + +..
T Consensus 177 RetPIAiisl~~~~~~St~~~~vv~ItgigvRkVy~Ksgi~e~LidWA~~Rtr~l~~ey~k~k~~~si~ll~d~YSFD~~ 256 (304)
T PF11124_consen 177 RETPIAIISLVPNKDQSTKENFVVKITGIGVRKVYVKSGIDEDLIDWAMLRTRQLYKEYLKGKKGCSIKLLVDVYSFDKD 256 (304)
T ss_pred cCCceEEEEeccccccCCCceEEEEEeeeEEEEEEeecChHHHHHHHHHHHHHHHHHHhccccccceEEEEEEeeeccHH
Confidence 78899999886542 23478999999999999999999999997666651 1 1234443 2 788
Q ss_pred hHHHHHhCCCeecC
Q 025840 222 VVDFYRNLGFEPDP 235 (247)
Q Consensus 222 a~~fY~k~GF~~~~ 235 (247)
..+..++.||+.+.
T Consensus 257 ~~k~L~~~gF~~i~ 270 (304)
T PF11124_consen 257 MKKTLKKKGFKKIS 270 (304)
T ss_pred HHHHHHHCCCeeee
Confidence 99999999999987
No 120
>PRK04531 acetylglutamate kinase; Provisional
Probab=83.16 E-value=9 Score=35.33 Aligned_cols=117 Identities=15% Similarity=0.169 Sum_probs=73.8
Q ss_pred EecCCCCCHHHHHHHHHHcCCCCCcHHHHHHHHhcceeEEEEEecccCCCCCCCCCCeEEEEEEEEeCCCCcEEEEEEEE
Q 025840 106 FSSGGDVDVYELQTLCDKVGWPRRPLSKLAAALKNSYLVATLHSIRKSPGSEGNEQRTLIGMARATSDHAFNATIWDVLV 185 (247)
Q Consensus 106 ~~~~~~~d~~~l~~l~~~~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~iVG~~~~~~~~~~~~~I~~l~V 185 (247)
+......|.+.+.++.+. .+.+...+.+ ++....+.++. ++..=|.+.+... ....++..++|
T Consensus 256 ~~~~~~~d~~~l~~ll~~-sf~r~~~~~y---~~~~~~~~~y~------------~~~y~~~Aiv~~~-~~~~~Ldkf~v 318 (398)
T PRK04531 256 ATDWDELDLERLNLLIES-SFGRTLKPDY---FDTTQLLRAYV------------SENYRAAAILTET-GGGPYLDKFAV 318 (398)
T ss_pred eCChhhcCHHHHHHHHhh-hcccchHHHH---hccCCceEEEE------------eCCCcEEEEEecC-CCceEeEEEEE
Confidence 444456688888888754 2233222222 22222222221 6666666666554 45789999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEE-eCHhhHHHH--HhCCCeecCCceeeeEecC
Q 025840 186 DPSYQGQGLGKALVEKVVRALLQKDIGNISLF-ADSQVVDFY--RNLGFEPDPEGIKGMFWHP 245 (247)
Q Consensus 186 ~p~~Rg~GlG~~Ll~~~~~~a~~~g~~~i~L~-~n~~a~~fY--~k~GF~~~~~~~~~~~w~~ 245 (247)
.+..||.|++..+.+.+.+... .-+|-. .+....++| +.-|+-. .....++||.
T Consensus 319 ~~~~~~~~v~d~vf~~~~~~~~----~L~Wrsr~~n~~~~Wyf~~s~G~~~--~~~~~lFw~G 375 (398)
T PRK04531 319 LDDARGEGLGRAVWNVMREETP----QLFWRSRHNNTINKFYYAESDGCIK--QEKWKVFWYG 375 (398)
T ss_pred ccchhhcChHHHHHHHHHhhCC----ceEEEcCCCCCccceeeecccceEe--cCCcEEEEcc
Confidence 9999999999999998887763 234432 344455666 4467666 4556788885
No 121
>TIGR03827 GNAT_ablB putative beta-lysine N-acetyltransferase. Members of this protein family are GNAT family acetyltransferases, based on a seed alignment in which every member is associated with a lysine 2,3-aminomutase family protein, usually as the adjacent gene. This family includes AblB, the enzyme beta-lysine acetyltransferase that completes the two-step synthesis of the osmolyte (compatible solute) N-epsilon-acetyl-beta-lysine; all members of the family may have this function. Note that N-epsilon-acetyl-beta-lysine has been observed only in methanogenic archaea (e.g. Methanosarcina) but that this model, paired with TIGR03820, suggests a much broader distribution.
Probab=81.94 E-value=3.6 Score=35.43 Aligned_cols=44 Identities=9% Similarity=0.083 Sum_probs=40.0
Q ss_pred CHHHHHHHHHHHHHHhCCCCEEEEEeCHhhHHHHHhCCCeecCC
Q 025840 193 GLGKALVEKVVRALLQKDIGNISLFADSQVVDFYRNLGFEPDPE 236 (247)
Q Consensus 193 GlG~~Ll~~~~~~a~~~g~~~i~L~~n~~a~~fY~k~GF~~~~~ 236 (247)
|-...|+..+.+.|++.|.+.|.+.+......+|++.||...+.
T Consensus 21 ~~~~~~~~~~~~~a~~~~~~ki~~~~~~~~~~~~~~~g~~~e~~ 64 (266)
T TIGR03827 21 NDVEALIPDLDALAKKEGYTKIIAKVPGSDKPLFEERGYLEEAK 64 (266)
T ss_pred ccHHHHHHHHHHHHHHcCCcEEEEEccHHHHHHHHHCCCeEEEe
Confidence 44789999999999999999999999999999999999999853
No 122
>COG5027 SAS2 Histone acetyltransferase (MYST family) [Chromatin structure and dynamics]
Probab=81.60 E-value=0.46 Score=42.36 Aligned_cols=40 Identities=25% Similarity=0.414 Sum_probs=30.6
Q ss_pred eEEEEEEEEeCCCCcEEEEEEEECCCCCCCCHHHHHHHHH
Q 025840 163 TLIGMARATSDHAFNATIWDVLVDPSYQGQGLGKALVEKV 202 (247)
Q Consensus 163 ~iVG~~~~~~~~~~~~~I~~l~V~p~~Rg~GlG~~Ll~~~ 202 (247)
.+|||..=.-.....-.+..|.+.|.||++|+|+.|++.-
T Consensus 248 h~vGyFSKEK~S~~~yNLaCILtLP~yQRrGYG~lLIdFS 287 (395)
T COG5027 248 HLVGYFSKEKESEQDYNLACILTLPPYQRRGYGKLLIDFS 287 (395)
T ss_pred eeeeeechhhcccccCceEEEEecChhHhcccceEeeeee
Confidence 5888876543344345688899999999999999998653
No 123
>PF13444 Acetyltransf_5: Acetyltransferase (GNAT) domain
Probab=81.02 E-value=4 Score=29.67 Aligned_cols=24 Identities=25% Similarity=0.188 Sum_probs=20.7
Q ss_pred CcEEEEEEEECCCCCCCCHHHHHH
Q 025840 176 FNATIWDVLVDPSYQGQGLGKALV 199 (247)
Q Consensus 176 ~~~~I~~l~V~p~~Rg~GlG~~Ll 199 (247)
..++|+.++|+|+||++.....|+
T Consensus 77 ~~~EisRl~V~~~~R~~~~~~~L~ 100 (101)
T PF13444_consen 77 RVAEISRLCVHPEYRRRKVLLLLW 100 (101)
T ss_pred cEEEeehheECHhHCCChHHHHHh
Confidence 457899999999999999888775
No 124
>cd03173 DUF619-like DUF619 domain of various N-acetylglutamate Kinases and N-acetylglutamate Synthases. DUF619-like: This family includes the DUF619 domain of various N-acetylglutamate synthases (NAGS) of the urea cycle found in humans and fish, the DUF619 domain of the NAGS of the fungal arginine-biosynthetic pathway (FABP), as well as the DUF619 domain present C-terminal of a NAG kinase-like domain in a limited number of predicted NAGSs found in bacteria and Dictyostelium. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate. NAGS is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Domain architecture of ureogenic and fungal NAGS consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. This subgroup also includes the DUF619 domain of the FABP N-acetylglutamate kinase (NAGK), the enzyme that catalyzes the second reaction of arginine
Probab=79.56 E-value=16 Score=26.70 Aligned_cols=79 Identities=11% Similarity=0.117 Sum_probs=54.0
Q ss_pred CCeEEEEEEEEeCCCCcEEEEEEEECCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEE-eCHhhHHHH--HhCCCeecCCc
Q 025840 161 QRTLIGMARATSDHAFNATIWDVLVDPSYQGQGLGKALVEKVVRALLQKDIGNISLF-ADSQVVDFY--RNLGFEPDPEG 237 (247)
Q Consensus 161 ~g~iVG~~~~~~~~~~~~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g~~~i~L~-~n~~a~~fY--~k~GF~~~~~~ 237 (247)
++..=|.+.+.......+++..++|.+..++.|++..+.+.+.+... .-++-. .+....+.| +.-|+-..+
T Consensus 17 de~y~~~AIvt~~~~~v~~LdkFav~~~~~~~gv~D~vf~~i~~d~~----~L~Wrsr~~n~~n~Wyf~rs~Gs~~~~-- 90 (98)
T cd03173 17 DEPLEGVAIVTYEGNSIPYLDKFAVSDHLWLNNVTDNIFNLIRKDFP----SLLWRVRENDANLKWYFSKSVGSLDKN-- 90 (98)
T ss_pred cCCccEEEEEecCCCCCEEEEEEEEcccccccCHHHHHHHHHHhhCC----eeEEEeCCCCCccceEEEeeEEEEEcC--
Confidence 55566666666555568999999999999999999999998887642 223322 244455666 446666543
Q ss_pred eeeeEecC
Q 025840 238 IKGMFWHP 245 (247)
Q Consensus 238 ~~~~~w~~ 245 (247)
...++||.
T Consensus 91 ~~~lFWyG 98 (98)
T cd03173 91 GFILFWYG 98 (98)
T ss_pred CeEEEeeC
Confidence 45677763
No 125
>PHA01733 hypothetical protein
Probab=78.60 E-value=6.3 Score=31.23 Aligned_cols=79 Identities=19% Similarity=0.141 Sum_probs=51.2
Q ss_pred CCeEEEEEEEEeC-CCCcEEEEEEEECCCCCCCCHHHHHHHHHHHHHHh-CCCCEEEEE---eCHhhHHHHHhCCCeecC
Q 025840 161 QRTLIGMARATSD-HAFNATIWDVLVDPSYQGQGLGKALVEKVVRALLQ-KDIGNISLF---ADSQVVDFYRNLGFEPDP 235 (247)
Q Consensus 161 ~g~iVG~~~~~~~-~~~~~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~-~g~~~i~L~---~n~~a~~fY~k~GF~~~~ 235 (247)
+|+++|.+.+..+ .++.+.++.|+.+.=.+ +-+..+++......+ +....++-. -|..+++|.+.+||+...
T Consensus 55 nG~l~aI~Gv~~d~~~~vG~pWlV~T~~v~k---~~~~f~re~r~~l~e~~~Yp~LwNyV~~~N~~hir~Lk~lGF~f~~ 131 (153)
T PHA01733 55 DGSLAGVAGLVEDMGNRVGEIWMVCTPAIEK---NPIALLRGAKWWLPKSRNYDLLWNIVDKRNLVHRKLLRKLGFKGLR 131 (153)
T ss_pred CCcEEEEecccccccCCCCceeEEecHHhHh---CCHHHHHHHHHHHHHhccccHHHHhHhcccHHHHHHHHHcCceeec
Confidence 8999999988653 34456776666654444 344555555555554 223333322 288899999999999987
Q ss_pred CceeeeE
Q 025840 236 EGIKGMF 242 (247)
Q Consensus 236 ~~~~~~~ 242 (247)
+...+..
T Consensus 132 ~~~~g~~ 138 (153)
T PHA01733 132 YVQPGPL 138 (153)
T ss_pred ccccCcC
Confidence 7655443
No 126
>COG2935 Putative arginyl-tRNA:protein arginylyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=78.15 E-value=12 Score=32.06 Aligned_cols=86 Identities=16% Similarity=0.211 Sum_probs=58.8
Q ss_pred CCcHHHHHHHHhcceeEEEEEec-ccCCCCCCCCCCeEEEEEEEEeCCCCcEEEEEEEECCCCCCCCHHHHHHHHHHHHH
Q 025840 128 RRPLSKLAAALKNSYLVATLHSI-RKSPGSEGNEQRTLIGMARATSDHAFNATIWDVLVDPSYQGQGLGKALVEKVVRAL 206 (247)
Q Consensus 128 ~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~~~~~g~iVG~~~~~~~~~~~~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a 206 (247)
..+..++...+.+.+...-+... ...|. .-.|++|+.+....-.++---+ ...-+|++...++|+..+-.=+..|
T Consensus 128 ~~s~~~f~~f~~d~~~~~~~~e~r~~~~~---~~~G~LvAVavtDvL~dGlSsV-Y~FydPd~s~~SLGt~~iL~~I~~a 203 (253)
T COG2935 128 DMSFKDFAAFLEDTHVNTQLIEYRRRKPG---KGEGKLVAVAVTDVLPDGLSSV-YTFYDPDMSKRSLGTLSILDQIAIA 203 (253)
T ss_pred CccHHHHHHHHhccccceeeEEEEecCCC---CCCCcEEEEEeeecccCcceeE-EEEeCCChhhhcchHHHHHHHHHHH
Confidence 35566777776665433322111 11111 2378999988876544433333 3457999999999999999999999
Q ss_pred HhCCCCEEEEE
Q 025840 207 LQKDIGNISLF 217 (247)
Q Consensus 207 ~~~g~~~i~L~ 217 (247)
++.|...+.|.
T Consensus 204 q~~~l~yvYLG 214 (253)
T COG2935 204 QRLGLPYVYLG 214 (253)
T ss_pred HHhCCCeEEEE
Confidence 99999999988
No 127
>COG5092 NMT1 N-myristoyl transferase [Lipid metabolism]
Probab=76.26 E-value=19 Score=32.02 Aligned_cols=51 Identities=12% Similarity=0.176 Sum_probs=41.3
Q ss_pred CCeEEEEEEEEe-----C--CCCcEEEEEEEECCCCCCCCHHHHHHHHHHHHHHhCCC
Q 025840 161 QRTLIGMARATS-----D--HAFNATIWDVLVDPSYQGQGLGKALVEKVVRALLQKDI 211 (247)
Q Consensus 161 ~g~iVG~~~~~~-----~--~~~~~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g~ 211 (247)
..++|||+.... . ....++|..++||.+.|++-+.-.|+.++-++|.-.|+
T Consensus 142 t~klVaFIsa~p~~v~vRgK~~~~~evNFLCihk~lRsKRltPvLIkEiTRR~n~~~i 199 (451)
T COG5092 142 TQKLVAFISAKPHLVSVRGKRSSVLEVNFLCIHKELRSKRLTPVLIKEITRRANVDGI 199 (451)
T ss_pred cceeEEEEecceeEEEEcccccccceEEEEEEehhhhhCccchHHHHHHHHhhhhhhh
Confidence 458999986531 1 22368999999999999999999999999999976654
No 128
>PF09924 DUF2156: Uncharacterized conserved protein (DUF2156); InterPro: IPR024320 This domain of unknown function is found in uncharacterised proteins and in Lysylphosphatidylglycerol synthetase, which catalyses the transfer of a lysyl group from L-lysyl-tRNA(Lys) to membrane-bound phosphatidylglycerol [].; PDB: 2HQY_A.
Probab=75.31 E-value=11 Score=32.85 Aligned_cols=57 Identities=11% Similarity=0.038 Sum_probs=38.2
Q ss_pred CCeEEEEEEEEeCCCCcEEEEEEEECCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEE
Q 025840 161 QRTLIGMARATSDHAFNATIWDVLVDPSYQGQGLGKALVEKVVRALLQKDIGNISLF 217 (247)
Q Consensus 161 ~g~iVG~~~~~~~~~~~~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g~~~i~L~ 217 (247)
+|+++|++......+..+++.++.-.-.---+|+-..|+.++++++++.|+..+.|.
T Consensus 189 dgki~af~~~~~~~~~~~~~~~~~k~~~~a~~G~~e~l~~~~~~~~~~~g~~~lnLg 245 (299)
T PF09924_consen 189 DGKIVAFAIGSPLGGRDGWSIDFEKADPDAPKGIYEFLNVEFAEHLKAEGVEYLNLG 245 (299)
T ss_dssp TTEEEEEEEEEEEE-TTEEEEEEEEE-TT-STTHHHHHHHHHHHHS--TT--EEE--
T ss_pred CCcEEEEEEEEEccCCccEEEEEEecCCCCCCcHHHHHHHHHHHhhhhCCceEEEcc
Confidence 899999999876553345555554443335789999999999999998999999865
No 129
>PRK00756 acyltransferase NodA; Provisional
Probab=74.04 E-value=8.5 Score=31.01 Aligned_cols=58 Identities=12% Similarity=0.075 Sum_probs=42.2
Q ss_pred cEEEEEEEECCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEeCHhhHHHHHh---CCCeecC
Q 025840 177 NATIWDVLVDPSYQGQGLGKALVEKVVRALLQKDIGNISLFADSQVVDFYRN---LGFEPDP 235 (247)
Q Consensus 177 ~~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g~~~i~L~~n~~a~~fY~k---~GF~~~~ 235 (247)
.+++...+|+|+..|.||+..+ +.+.-.+++.|..-..-++..+..+-.++ .|...+-
T Consensus 85 VaElGLygVRpDLEGlGi~~S~-r~m~PvLq~LgVPF~FGtVR~al~~Hv~R~~r~g~~ti~ 145 (196)
T PRK00756 85 VAELGLYGVRPDLEGLGIAHSI-RAMYPVLQELGVPFAFGTVRHALRNHVERLCRNGLATIV 145 (196)
T ss_pred EEEeeeeeeccccccccchhhH-HHHHHHHHhcCCCeecccchHHHHHHHHHHhccCcceec
Confidence 4789999999999999999876 67777777788876666666655554444 4554433
No 130
>PF12953 DUF3842: Domain of unknown function (DUF3842); InterPro: IPR024208 This family of proteins has no known function.
Probab=65.42 E-value=13 Score=28.56 Aligned_cols=54 Identities=24% Similarity=0.366 Sum_probs=42.0
Q ss_pred CCCCCCHHHHHHHHHHHHHHhCCCCEEEEEeCHhhHHHHHhCCCeecCCceeeeE
Q 025840 188 SYQGQGLGKALVEKVVRALLQKDIGNISLFADSQVVDFYRNLGFEPDPEGIKGMF 242 (247)
Q Consensus 188 ~~Rg~GlG~~Ll~~~~~~a~~~g~~~i~L~~n~~a~~fY~k~GF~~~~~~~~~~~ 242 (247)
|=||-|+|+.+++.+.+.+.+ +..-+-|.||.-|-.-..|.|-..-.++.+...
T Consensus 6 DGQGGGiG~~iv~~lr~~~~~-~~eI~AlGTNa~AT~~MlKaGA~~gATGENaIv 59 (131)
T PF12953_consen 6 DGQGGGIGKQIVEKLRKELPE-EVEIIALGTNAIATSAMLKAGANEGATGENAIV 59 (131)
T ss_pred eCCCChhHHHHHHHHHHhCCC-CcEEEEEehhHHHHHHHHHcCCCCcccccchhe
Confidence 458999999999999888765 466677888998888888988877666655433
No 131
>PHA00432 internal virion protein A
Probab=64.69 E-value=48 Score=25.82 Aligned_cols=70 Identities=11% Similarity=0.237 Sum_probs=38.6
Q ss_pred CCeEEEEEEEEeCCCCcEEEEEEEECCCCC----CCCHHHHHHHHHHHHHHhCCCCEEEEE---eCHhhHHHHHhCCCee
Q 025840 161 QRTLIGMARATSDHAFNATIWDVLVDPSYQ----GQGLGKALVEKVVRALLQKDIGNISLF---ADSQVVDFYRNLGFEP 233 (247)
Q Consensus 161 ~g~iVG~~~~~~~~~~~~~I~~l~V~p~~R----g~GlG~~Ll~~~~~~a~~~g~~~i~L~---~n~~a~~fY~k~GF~~ 233 (247)
+|++++.+. +.-.-++.|+.+-=.+ .+-=-++++....+.+.+. ...++-. -|..+++|-+.+||+.
T Consensus 45 ~G~~~aI~G-----n~G~~vW~v~T~~v~~~~~~~~reF~k~~~~~ld~ml~~-yp~LwNyV~~~N~~hir~Lk~lGf~f 118 (137)
T PHA00432 45 DGFVLAIGG-----NQGDQVWFVTSDQVWRLTKKEKREFRKLIMEYRDMMLDQ-YPSLWNYVWVGNKSHIRFLKSIGAVF 118 (137)
T ss_pred CCeEEEEec-----CCCCceEEEecHHhhhCChhhhHHHHHHHHHHHHHHHHh-hhhhheeeecCCHHHHHHHHHcCeee
Confidence 999988773 2122344444443333 1111223333333333332 3334333 3899999999999998
Q ss_pred cCC
Q 025840 234 DPE 236 (247)
Q Consensus 234 ~~~ 236 (247)
..+
T Consensus 119 ~~e 121 (137)
T PHA00432 119 HNE 121 (137)
T ss_pred ecc
Confidence 776
No 132
>PRK02983 lysS lysyl-tRNA synthetase; Provisional
Probab=63.34 E-value=34 Score=35.83 Aligned_cols=58 Identities=12% Similarity=0.056 Sum_probs=46.6
Q ss_pred CCCCeEEEEEEEEeCCCCcEEEEEEEECCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEE
Q 025840 159 NEQRTLIGMARATSDHAFNATIWDVLVDPSYQGQGLGKALVEKVVRALLQKDIGNISLF 217 (247)
Q Consensus 159 ~~~g~iVG~~~~~~~~~~~~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g~~~i~L~ 217 (247)
+.+|+++|++.+...+.....+.-+--+|+. -.|+--.|+.+++.++++.|++.+.|.
T Consensus 427 d~~G~i~af~s~~p~~~~g~slDLMRr~pda-pnGvmE~L~~~l~~~~k~~G~~~~sLg 484 (1094)
T PRK02983 427 DADGQVVALLSFVPWGRRGLSLDLMRRSPDA-PNGVIELMVAELALEAESLGITRISLN 484 (1094)
T ss_pred CCCCeEEEEEEEeeeCCCCEEEEecccCCCC-CCCHHHHHHHHHHHHHHHcCCCEEEec
Confidence 3579999999988755434556545555664 899999999999999999999999887
No 133
>PHA02769 hypothetical protein; Provisional
Probab=62.05 E-value=8.2 Score=29.08 Aligned_cols=43 Identities=16% Similarity=0.248 Sum_probs=28.9
Q ss_pred HHHHHHHHH---HHHHhCCCCEEEEEe-CHhhHHHHHhCCCeecCCc
Q 025840 195 GKALVEKVV---RALLQKDIGNISLFA-DSQVVDFYRNLGFEPDPEG 237 (247)
Q Consensus 195 G~~Ll~~~~---~~a~~~g~~~i~L~~-n~~a~~fY~k~GF~~~~~~ 237 (247)
|--|++.+. +..+..|...+|--. ...+..+|.|.||+.+|..
T Consensus 94 gd~lvnfl~~l~~k~~~dg~evlwtlgfpdhsnaly~kagfk~vg~t 140 (154)
T PHA02769 94 GDHLVNFLNDLAEKLKKDGFEVLWTLGFPDHSNALYKKAGFKLVGQT 140 (154)
T ss_pred hHHHHHHHHHHHHHHhcCCeEEEEEecCCCcchhHHhhhhhhHhccc
Confidence 445555544 444556777666554 4557899999999998853
No 134
>TIGR02990 ectoine_eutA ectoine utilization protein EutA. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti and Silicibacter pomeroyi. It is missing from two other species with the other ectoine transport and utilization genes: Pseudomonas putida and Agrobacterium tumefaciens.
Probab=58.37 E-value=18 Score=30.83 Aligned_cols=42 Identities=19% Similarity=0.211 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHHhCCCCEEEEEe------CHhhHHHHHhCCCeecCC
Q 025840 195 GKALVEKVVRALLQKDIGNISLFA------DSQVVDFYRNLGFEPDPE 236 (247)
Q Consensus 195 G~~Ll~~~~~~a~~~g~~~i~L~~------n~~a~~fY~k~GF~~~~~ 236 (247)
...-...+++.++..|+++|.+-+ |....+||++.||+.+..
T Consensus 104 ~tt~~~A~~~AL~alg~~RIalvTPY~~~v~~~~~~~l~~~G~eV~~~ 151 (239)
T TIGR02990 104 VVTPSSAAVDGLAALGVRRISLLTPYTPETSRPMAQYFAVRGFEIVNF 151 (239)
T ss_pred eeCHHHHHHHHHHHcCCCEEEEECCCcHHHHHHHHHHHHhCCcEEeee
Confidence 345566777888888999999985 778999999999998765
No 135
>COG2898 Uncharacterized conserved protein [Function unknown]
Probab=56.35 E-value=45 Score=32.02 Aligned_cols=58 Identities=10% Similarity=0.050 Sum_probs=46.9
Q ss_pred CCCCeEEEEEEEEeCCC-CcEEEEEEEECCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEE
Q 025840 159 NEQRTLIGMARATSDHA-FNATIWDVLVDPSYQGQGLGKALVEKVVRALLQKDIGNISLF 217 (247)
Q Consensus 159 ~~~g~iVG~~~~~~~~~-~~~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g~~~i~L~ 217 (247)
+.+|+||||+.+...+. ....|+-+--+|+. -+|+-..|+-+++.++++.|++.+.+.
T Consensus 399 ~~~g~VvaFa~l~~~~~~~~~SlDlMR~sp~a-p~g~mdfLf~~li~~aKe~G~~~fsLg 457 (538)
T COG2898 399 DNEGEVVAFANLMPTGGKEGYSLDLMRRSPDA-PNGTMDFLFSELILWAKEEGYQRFSLG 457 (538)
T ss_pred cCCCCeEEEEeecccCCcceeEEEeeecCCCC-CchHHHHHHHHHHHHHHHcCCeEEecC
Confidence 45788999999987544 44667666666665 579999999999999999999999887
No 136
>KOG3014 consensus Protein involved in establishing cohesion between sister chromatids during DNA replication [Replication, recombination and repair]
Probab=53.98 E-value=42 Score=28.85 Aligned_cols=32 Identities=13% Similarity=0.159 Sum_probs=27.6
Q ss_pred cEEEEEEEECCCCCCCCHHHHHHHHHHHHHHh
Q 025840 177 NATIWDVLVDPSYQGQGLGKALVEKVVRALLQ 208 (247)
Q Consensus 177 ~~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~ 208 (247)
...|..+-|.+.-|++|+++.|++.+......
T Consensus 183 ~~GIsRIWV~s~~Rr~gIAs~lldva~~~~~~ 214 (257)
T KOG3014|consen 183 ICGISRIWVSSLRRRKGIASLLLDVARCNFVY 214 (257)
T ss_pred EeeeEEEEeehhhhhhhhHHHHHHHHHHhhhh
Confidence 46789999999999999999999988766543
No 137
>KOG3698 consensus Hyaluronoglucosaminidase [Posttranslational modification, protein turnover, chaperones]
Probab=53.43 E-value=22 Score=34.30 Aligned_cols=54 Identities=15% Similarity=0.124 Sum_probs=46.6
Q ss_pred EEECCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEe---CHhhHHHHHhCCCeecCC
Q 025840 183 VLVDPSYQGQGLGKALVEKVVRALLQKDIGNISLFA---DSQVVDFYRNLGFEPDPE 236 (247)
Q Consensus 183 l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g~~~i~L~~---n~~a~~fY~k~GF~~~~~ 236 (247)
.+++.+.---|+.+.||..++..++..|.....+.+ +.+-++||.++||..++.
T Consensus 822 ~~~~~~a~D~~~~k~m~~vll~tL~aNGsrGaf~~V~~dD~~~~~fys~lG~~d~~~ 878 (891)
T KOG3698|consen 822 TYFGMDASDAHPMKKMIQVLLVTLAANGSRGAFLTVAIDDIERQKFYSELGLTDLGL 878 (891)
T ss_pred hccccccccchHHHHHHHHHHHHHHhcCCcceeEEechhHHHHHHHHHHhchHHHhH
Confidence 556777778899999999999999999999888886 567899999999987663
No 138
>PF07395 Mig-14: Mig-14; InterPro: IPR009977 This family contains a number of bacterial mig-14 proteins (approximately 270 residues long). In Salmonella, mig-14 contributes to resistance to antimicrobial peptides, although the mechanism is not fully understood [].
Probab=51.09 E-value=72 Score=27.73 Aligned_cols=55 Identities=7% Similarity=-0.108 Sum_probs=41.1
Q ss_pred CCeEEEEEEEE-eCCCCcEEEE--EEEECCCCCCCCHHHHHH----HHHHHHHHhCCCCEEE
Q 025840 161 QRTLIGMARAT-SDHAFNATIW--DVLVDPSYQGQGLGKALV----EKVVRALLQKDIGNIS 215 (247)
Q Consensus 161 ~g~iVG~~~~~-~~~~~~~~I~--~l~V~p~~Rg~GlG~~Ll----~~~~~~a~~~g~~~i~ 215 (247)
+|++|++-.+. .+.....++. ..++||+++.--.|+-|| +.+.+.|+++|.+-..
T Consensus 181 ~~~P~Aiqlv~k~es~~wv~~D~iNgG~Dp~~~~~SpGSiL~w~Ni~~A~~~~~~~~k~lrf 242 (264)
T PF07395_consen 181 NGQPCAIQLVYKVESPKWVYFDYINGGYDPECRDFSPGSILMWLNIQDAWEYCRAQGKPLRF 242 (264)
T ss_pred CCcceEEEEEEEecCCCeEEEecccCccCcccccCCCccEEEEeeHHHHHHHHHHhCCceEE
Confidence 99999997664 3444444444 578999999999999885 7777788888866443
No 139
>COG3473 Maleate cis-trans isomerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=46.73 E-value=32 Score=28.89 Aligned_cols=34 Identities=29% Similarity=0.397 Sum_probs=27.2
Q ss_pred HHHHHHhCCCCEEEEEe------CHhhHHHHHhCCCeecC
Q 025840 202 VVRALLQKDIGNISLFA------DSQVVDFYRNLGFEPDP 235 (247)
Q Consensus 202 ~~~~a~~~g~~~i~L~~------n~~a~~fY~k~GF~~~~ 235 (247)
+++.++..|+.++.+-+ |.....|+++.||+.++
T Consensus 109 vv~aL~al~a~ri~vlTPY~~evn~~e~ef~~~~Gfeiv~ 148 (238)
T COG3473 109 VVEALNALGAQRISVLTPYIDEVNQREIEFLEANGFEIVD 148 (238)
T ss_pred HHHHHHhhCcceEEEeccchhhhhhHHHHHHHhCCeEEEE
Confidence 45556667888887774 88899999999999875
No 140
>cd04263 DUF619-NAGK-FABP DUF619 domain of N-acetylglutamate kinase (NAGK) of the fungal arginine-biosynthetic pathway. DUF619-NAGK-FABP: DUF619 domain of N-acetylglutamate kinase (NAGK) of the fungal arginine-biosynthetic pathway (FABP). The nuclear-encoded, mitochondrial polyprotein precursor (ARG5,6) consists of an N-terminal NAGK (ArgB) domain, a central DUF619 domain, and a C-terminal reductase domain (ArgC, N-Acetylglutamate Phosphate Reductase, NAGPR). The precursor is cleaved into two distinct enzymes (NAGK-DUF619 and NAGPR) in the mitochondria. Native molecular weights of these proteins indicate that the kinase is an octamer whereas the reductase is a dimer. Arg5,6 catalyzes the second reaction of arginine biosynthesis; the phosphorylation of the gamma-carboxyl group of NAG to produce N-acetylglutamylphosphate (NAGP) which is subsequently converted to ornithine in two more steps. It also binds and regulates the promoters of nuclear and mitochondrial genes, and may possibly regu
Probab=46.18 E-value=1.2e+02 Score=22.25 Aligned_cols=79 Identities=11% Similarity=0.056 Sum_probs=49.6
Q ss_pred CCeEEEEEEEEeCCCCcEEEEEEEECCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEE-eCHhhHHHH--HhCCCeecCCc
Q 025840 161 QRTLIGMARATSDHAFNATIWDVLVDPSYQGQGLGKALVEKVVRALLQKDIGNISLF-ADSQVVDFY--RNLGFEPDPEG 237 (247)
Q Consensus 161 ~g~iVG~~~~~~~~~~~~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g~~~i~L~-~n~~a~~fY--~k~GF~~~~~~ 237 (247)
|+-+=+.+.+....+..+++..++|..+-++.|++..+.+.+.+... .-++-. .+.+....| +.-|+-.- .
T Consensus 17 de~~~a~AIV~~~~~~vp~LdkF~vs~~~~l~~vaD~Vf~~i~~d~p----~L~W~~r~~n~~~~W~f~rsdGs~~~--~ 90 (98)
T cd04263 17 DEPMEVLAIVLPPSGEVATLATFTITKSGWLNNVADNIFTAIKKDHP----KLVWTVREDDENLKWHFEKADGSFTR--N 90 (98)
T ss_pred cCCCcEEEEEecCCCCCEEEEEEEEccccccccHHHHHHHHHHhhCC----eeEEEeCCCCCccceEEeeeEEEEEc--C
Confidence 44444444444443567999999999999999999999988776632 333322 233344555 33555543 3
Q ss_pred eeeeEecC
Q 025840 238 IKGMFWHP 245 (247)
Q Consensus 238 ~~~~~w~~ 245 (247)
...++||.
T Consensus 91 ~~~lFWyG 98 (98)
T cd04263 91 GKVLFWYG 98 (98)
T ss_pred CeEEEecC
Confidence 35677874
No 141
>cd08356 Glo_EDI_BRP_like_17 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.
Probab=45.91 E-value=19 Score=26.16 Aligned_cols=18 Identities=39% Similarity=0.696 Sum_probs=15.0
Q ss_pred HhhHHHHHhCCCeecCCc
Q 025840 220 SQVVDFYRNLGFEPDPEG 237 (247)
Q Consensus 220 ~~a~~fY~k~GF~~~~~~ 237 (247)
.++++||+.+||+.....
T Consensus 13 ~~s~~FY~~LGf~~~~~~ 30 (113)
T cd08356 13 AESKQFYQALGFELEWEN 30 (113)
T ss_pred HHHHHHHHHhCCeeEecC
Confidence 569999999999987654
No 142
>PRK15312 antimicrobial resistance protein Mig-14; Provisional
Probab=44.60 E-value=83 Score=27.78 Aligned_cols=54 Identities=11% Similarity=0.027 Sum_probs=40.0
Q ss_pred CCeEEEEEEEE-eCCCCcEEEE--EEEECCCCCCCCHHHHHH----HHHHHHHHhCCCCEE
Q 025840 161 QRTLIGMARAT-SDHAFNATIW--DVLVDPSYQGQGLGKALV----EKVVRALLQKDIGNI 214 (247)
Q Consensus 161 ~g~iVG~~~~~-~~~~~~~~I~--~l~V~p~~Rg~GlG~~Ll----~~~~~~a~~~g~~~i 214 (247)
+|++|++-.+. .+.....+++ ..++||++..--+|+-|| +.+.+.|.++|.+-.
T Consensus 211 ~~~PcA~qlv~k~eSp~wi~~D~iNgG~Dpe~~~~spGSIL~WlNi~~A~~~~~~~~K~lr 271 (298)
T PRK15312 211 EGIPCAFDIVLKSESQMNVYFDVPNGAVKNECMPLSPGSILMWLNISRARHYCQERQKKLI 271 (298)
T ss_pred CCcceEEEEEEEecCCCcEEEecccCccCcccccCCCccEEEEecHHHHHHHHHhcCCcEE
Confidence 99999997664 3444444443 578999999999999874 777777777776633
No 143
>cd07267 THT_Oxygenase_N N-terminal domain of 2,4,5-trihydroxytoluene (THT) oxygenase. This subfamily contains the N-terminal, non-catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.
Probab=42.57 E-value=28 Score=25.14 Aligned_cols=26 Identities=15% Similarity=0.346 Sum_probs=18.8
Q ss_pred CCEEEEEeC--HhhHHHHHhCCCeecCC
Q 025840 211 IGNISLFAD--SQVVDFYRNLGFEPDPE 236 (247)
Q Consensus 211 ~~~i~L~~n--~~a~~fY~k~GF~~~~~ 236 (247)
+..+.+.++ .++.+||+.+||+....
T Consensus 4 l~hv~l~v~Dl~~s~~FY~~lGl~~~~~ 31 (113)
T cd07267 4 IAHVRFEHPDLDKAERFLTDFGLEVAAR 31 (113)
T ss_pred EEEEEEccCCHHHHHHHHHHcCCEEEEe
Confidence 345666653 56999999999987543
No 144
>cd07043 STAS_anti-anti-sigma_factors Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation. Anti-anti-sigma factors play an important role in the regulation of several sigma factors and their corresponding anti-sigma factors. Upon dephosphorylation they bind the anti-sigma factor and induce the release of the sigma factor from the anti-sigma factor. In a feedback mechanism the anti-anti-sigma factor can be inactivated via phosphorylation by the anti-sigma factor. Well studied examples from Bacillus subtilis are SpoIIAA (regulating sigmaF and sigmaC which play an important role in sporulation) and RsbV (regulating sigmaB involved in the general stress response). The STAS domain is also found in the C- terminal region of sulphate transporters and stressosomes.
Probab=41.63 E-value=69 Score=22.09 Aligned_cols=39 Identities=8% Similarity=0.016 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHHhCCCCEEEEEeCHhhHHHHHhCCCee
Q 025840 195 GKALVEKVVRALLQKDIGNISLFADSQVVDFYRNLGFEP 233 (247)
Q Consensus 195 G~~Ll~~~~~~a~~~g~~~i~L~~n~~a~~fY~k~GF~~ 233 (247)
|-.++..+.+.++++|........++...+++++.|+..
T Consensus 55 g~~~L~~l~~~~~~~g~~v~i~~~~~~~~~~l~~~gl~~ 93 (99)
T cd07043 55 GLGVLLGAYKRARAAGGRLVLVNVSPAVRRVLELTGLDR 93 (99)
T ss_pred hHHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHhCcce
Confidence 457888899999988877444446889999999999874
No 145
>PF11039 DUF2824: Protein of unknown function (DUF2824); InterPro: IPR022568 This family of proteins has no known function. Members of the family are found in P22-like viruses and bacteria. Some of the phage members have been annotated as head assembly proteins, but this has not been confirmed.
Probab=40.40 E-value=1.8e+02 Score=22.69 Aligned_cols=74 Identities=18% Similarity=0.171 Sum_probs=46.4
Q ss_pred CCCeEEEEEEEEeCCCCcEEEEEEEECCCCCCCCHHHHHHHHHHHHHHhC-CCCEEEEEe---CHhhHHHHHhCCCeecC
Q 025840 160 EQRTLIGMARATSDHAFNATIWDVLVDPSYQGQGLGKALVEKVVRALLQK-DIGNISLFA---DSQVVDFYRNLGFEPDP 235 (247)
Q Consensus 160 ~~g~iVG~~~~~~~~~~~~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~-g~~~i~L~~---n~~a~~fY~k~GF~~~~ 235 (247)
+++.++|+..+..-.....+...+ -+|++|| ++...-+..-++..+. ....+.-.+ -.-.+-.-+-+|.+.+|
T Consensus 45 eg~~l~Gi~~v~~i~~~~vecHa~-y~P~fRG--~a~~~~~~F~kwlL~Ns~f~~vit~vp~kt~~Grvic~llg~~RVG 121 (151)
T PF11039_consen 45 EGGQLGGIVYVEEIQPSVVECHAM-YDPGFRG--YALEIGRLFCKWLLENSPFQNVITFVPDKTRYGRVICRLLGARRVG 121 (151)
T ss_pred eceEEEEEEEEEEEeeeeEEEEee-eccccch--hHHHHHHHHHHHHhcCCceeEEEEecccccccchhHhhhhCCceee
Confidence 488999998876544445555444 6899999 8877777777777765 333332222 12233333457888777
Q ss_pred C
Q 025840 236 E 236 (247)
Q Consensus 236 ~ 236 (247)
.
T Consensus 122 ~ 122 (151)
T PF11039_consen 122 H 122 (151)
T ss_pred e
Confidence 4
No 146
>TIGR00377 ant_ant_sig anti-anti-sigma factor. This superfamily includes small (105-125 residue) proteins related to SpoIIAA of Bacillus subtilis, an anti-anti-sigma factor. SpoIIAA can bind to and inhibit the anti-sigma F factor SpoIIAB. Also, it can be phosphorylated by SpoIIAB on a Ser residue at position 59 of the seed alignment. A similar arrangement is inferred for RsbV, an anti-anti-sigma factor for sigma B. This Ser is fairly well conserved within a motif resembling MXS[STA]G[VIL]X[VIL][VILF] among homologous known or predicted anti-anti-sigma factors. Regions similar to SpoIIAA and apparently homologous, but differing considerably near the phosphorlated Ser of SpoIIAA, appear in a single copy in several longer proteins.
Probab=36.74 E-value=76 Score=22.56 Aligned_cols=40 Identities=8% Similarity=-0.002 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHHhCCCCEEEEEeCHhhHHHHHhCCCeec
Q 025840 195 GKALVEKVVRALLQKDIGNISLFADSQVVDFYRNLGFEPD 234 (247)
Q Consensus 195 G~~Ll~~~~~~a~~~g~~~i~L~~n~~a~~fY~k~GF~~~ 234 (247)
|-.++..+.+.++++|..-.....++...++++..||...
T Consensus 60 gl~~L~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~l~~~ 99 (108)
T TIGR00377 60 GLGVLLGRYKQVRRVGGQLVLVSVSPRVARLLDITGLLRI 99 (108)
T ss_pred cHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHhChhhe
Confidence 3467777888888888764444468999999999999763
No 147
>cd08344 MhqB_like_N N-terminal domain of MhqB, a type I extradiol dioxygenase, and similar proteins. This subfamily contains the N-terminal, non-catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.
Probab=35.13 E-value=51 Score=23.58 Aligned_cols=27 Identities=22% Similarity=0.410 Sum_probs=20.3
Q ss_pred CCCEEEEEeC--HhhHHHHHhCCCeecCC
Q 025840 210 DIGNISLFAD--SQVVDFYRNLGFEPDPE 236 (247)
Q Consensus 210 g~~~i~L~~n--~~a~~fY~k~GF~~~~~ 236 (247)
++..+.|.++ .++.+||+.+||+....
T Consensus 2 ~i~hv~l~v~d~~~s~~FY~~lG~~~~~~ 30 (112)
T cd08344 2 SIDHFALEVPDLEVARRFYEAFGLDVREE 30 (112)
T ss_pred ceeEEEEecCCHHHHHHHHHHhCCcEEee
Confidence 3456777763 56999999999998654
No 148
>TIGR02886 spore_II_AA anti-sigma F factor antagonist. The anti-sigma F factor antagonist, also called stage II sporulation protein AA, is a protein universal among endospore-forming bacteria, all of which belong to the Firmcutes
Probab=33.57 E-value=1.3e+02 Score=21.45 Aligned_cols=39 Identities=10% Similarity=0.066 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHHhCCCCEEEEEeCHhhHHHHHhCCCee
Q 025840 195 GKALVEKVVRALLQKDIGNISLFADSQVVDFYRNLGFEP 233 (247)
Q Consensus 195 G~~Ll~~~~~~a~~~g~~~i~L~~n~~a~~fY~k~GF~~ 233 (247)
|-.++..+.+.++++|.+-.....++...+.+++.||..
T Consensus 56 gi~~L~~~~~~~~~~g~~l~l~~~~~~v~~~l~~~gl~~ 94 (106)
T TIGR02886 56 GLGVILGRYKKIKNEGGEVIVCNVSPAVKRLFELSGLFK 94 (106)
T ss_pred HHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhCCce
Confidence 335566677888888877555556899999999999875
No 149
>cd08350 BLMT_like BLMT, a bleomycin resistance protein encoded on the transposon Tn5, and similar proteins. BLMT is a bleomycin (Bm) resistance protein, encoded by the ble gene on the transposon Tn5. This protein confers a survival advantage to Escherichia coli host cells. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMT has strong binding affinity to Bm and it protects against this lethal compound through drug sequestering. BLMT has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMT is a dimer with two Bm-binding pockets formed at the dimer interface.
Probab=33.31 E-value=33 Score=24.95 Aligned_cols=18 Identities=28% Similarity=0.464 Sum_probs=14.7
Q ss_pred HhhHHHHHhCCCeecCCc
Q 025840 220 SQVVDFYRNLGFEPDPEG 237 (247)
Q Consensus 220 ~~a~~fY~k~GF~~~~~~ 237 (247)
.++++||+++||+.....
T Consensus 14 ~~s~~FY~~lG~~~~~~~ 31 (120)
T cd08350 14 DATEAFYARLGFSVGYRQ 31 (120)
T ss_pred HHHHHHHHHcCCEEEecC
Confidence 569999988999986543
No 150
>cd07042 STAS_SulP_like_sulfate_transporter Sulphate Transporter and Anti-Sigma factor antagonist domain of SulP-like sulfate transporters, plays a role in the function and regulation of the transport activity, proposed general NTP binding function. The SulP family is a large and diverse family of anion transporters, with members from eubacteria, plants, fungi, and mammals. They contain 10 to 14 transmembrane helices which form the catalytic core of the protein and a C-terminal extension, the STAS (Sulphate Transporter and AntiSigma factor antagonist) domain which plays a role in the function and regulation of the transport activity. The STAS domain is found in the C-terminal region of sulphate transporters and bacterial anti-sigma factor antagonists. It has been suggested that this domain may have a general NTP binding function.
Probab=31.59 E-value=1.3e+02 Score=21.00 Aligned_cols=41 Identities=15% Similarity=0.199 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHhCCCCEEEEEeCHhhHHHHHhCCCeecC
Q 025840 195 GKALVEKVVRALLQKDIGNISLFADSQVVDFYRNLGFEPDP 235 (247)
Q Consensus 195 G~~Ll~~~~~~a~~~g~~~i~L~~n~~a~~fY~k~GF~~~~ 235 (247)
|-.++..+.+.++++|.+-.....++...+.+++.||...-
T Consensus 58 ~~~~L~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~g~~~~~ 98 (107)
T cd07042 58 AAEALEELVKDLRKRGVELYLAGLNPQVRELLERAGLLDEI 98 (107)
T ss_pred HHHHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHcCcHHHh
Confidence 55677778888888887645555688999999999997643
No 151
>cd06844 STAS Sulphate Transporter and Anti-Sigma factor antagonist domain found in the C-terminal region of sulphate transporters as well as in bacterial and archaeal proteins involved in the regulation of sigma factors. The STAS (Sulphate Transporter and Anti-Sigma factor antagonist) domain is found in the C-terminal region of sulphate transporters as well as in bacterial and archaeal proteins involved in the regulation of sigma factors, like anti-anti-sigma factors and "stressosome" components. The sigma factor regulators are involved in protein-protein interaction which is regulated by phosphorylation.
Probab=30.84 E-value=1.3e+02 Score=21.32 Aligned_cols=39 Identities=10% Similarity=-0.045 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHHhCCCCEEEEEeCHhhHHHHHhCCCee
Q 025840 195 GKALVEKVVRALLQKDIGNISLFADSQVVDFYRNLGFEP 233 (247)
Q Consensus 195 G~~Ll~~~~~~a~~~g~~~i~L~~n~~a~~fY~k~GF~~ 233 (247)
|-.++..+.+.++++|.+-.....++...+.+++.|+..
T Consensus 56 gl~~L~~l~~~~~~~g~~l~l~~~~~~v~~~l~~~gl~~ 94 (100)
T cd06844 56 GTGVLLERSRLAEAVGGQFVLTGISPAVRITLTESGLDK 94 (100)
T ss_pred HHHHHHHHHHHHHHcCCEEEEECCCHHHHHHHHHhCchh
Confidence 556778888888888876445556899999999999875
No 152
>PF09924 DUF2156: Uncharacterized conserved protein (DUF2156); InterPro: IPR024320 This domain of unknown function is found in uncharacterised proteins and in Lysylphosphatidylglycerol synthetase, which catalyses the transfer of a lysyl group from L-lysyl-tRNA(Lys) to membrane-bound phosphatidylglycerol [].; PDB: 2HQY_A.
Probab=30.38 E-value=1e+02 Score=26.71 Aligned_cols=72 Identities=15% Similarity=0.111 Sum_probs=45.0
Q ss_pred CCeEEEEEEEEeCCCCcEEEEEEEECCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEeCHhhHHHHHhCCCeecCCceee
Q 025840 161 QRTLIGMARATSDHAFNATIWDVLVDPSYQGQGLGKALVEKVVRALLQKDIGNISLFADSQVVDFYRNLGFEPDPEGIKG 240 (247)
Q Consensus 161 ~g~iVG~~~~~~~~~~~~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g~~~i~L~~n~~a~~fY~k~GF~~~~~~~~~ 240 (247)
++-+|++.... +...+.-..|+ .|+ --..+++.+.+.|.+.|...+...+.+....+|+.+||.....+...
T Consensus 31 ~~~~i~y~~~~--~~~~~~~~Pig-~~~-----~~~~~i~~f~~~~~~~~~~~~~~~v~e~~~~~~~~~g~~~~~~g~ey 102 (299)
T PF09924_consen 31 GDGLIAYRVRG--GGAVVLGDPIG-APE-----DRPELIEEFLEFADRNGWKPIFYGVSEEFLELLEELGFESNRDGEEY 102 (299)
T ss_dssp TTEEE-EEEEE--TTEEEEE--EE--SS------HHHHHHHHHHHHHHCTS--EEEEE-HHHHHHHHHHSEEE-GGG-EE
T ss_pred CCEEEEEEEEC--CeEEEEEcCcc-CcH-----HHHHHHHHHHHHHHHCCCceEEEECCHHHHHHHHHcCCeeecCCcEE
Confidence 77777774332 22122223344 343 34689999999999999998999999999999999999887665543
No 153
>cd08362 BphC5-RrK37_N_like N-terminal, non-catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Rhodococcus rhodochrous K37, and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the N-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dioxyge
Probab=28.48 E-value=83 Score=22.45 Aligned_cols=27 Identities=22% Similarity=0.398 Sum_probs=20.1
Q ss_pred CCCEEEEEeC--HhhHHHHHh-CCCeecCC
Q 025840 210 DIGNISLFAD--SQVVDFYRN-LGFEPDPE 236 (247)
Q Consensus 210 g~~~i~L~~n--~~a~~fY~k-~GF~~~~~ 236 (247)
++..+.+.++ ..+.+||++ +||+....
T Consensus 3 ~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~ 32 (120)
T cd08362 3 ALRGVGLGVPDLAAAAAFYREVWGLSVVAE 32 (120)
T ss_pred eeeEEEEecCCHHHHHHHHHhCcCcEEEEe
Confidence 4556777763 569999987 99998644
No 154
>COG0375 HybF Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) [General function prediction only]
Probab=27.99 E-value=1.5e+02 Score=22.40 Aligned_cols=34 Identities=15% Similarity=0.245 Sum_probs=26.3
Q ss_pred CHHHHHHHHHHHHHHhCCC---CEEEEE------eCHhhHHHH
Q 025840 193 GLGKALVEKVVRALLQKDI---GNISLF------ADSQVVDFY 226 (247)
Q Consensus 193 GlG~~Ll~~~~~~a~~~g~---~~i~L~------~n~~a~~fY 226 (247)
.++.++++-++++|++.|+ +.++|. +|+.+.+|-
T Consensus 5 Sla~aii~~i~~~A~~~~a~~V~~V~l~IG~ls~v~~~~l~Fa 47 (115)
T COG0375 5 SLAQAIIELIEEQAEKHGAKRVTAVWLEIGELSCVEPEALRFA 47 (115)
T ss_pred HHHHHHHHHHHHHHHHcCCceEEEEEEEEcceeccCHHHHHHH
Confidence 4788999999999999987 455665 377777663
No 155
>cd07265 2_3_CTD_N N-terminal domain of catechol 2,3-dioxygenase. This subfamily contains the N-terminal, non-catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the N-terminal do
Probab=27.94 E-value=84 Score=22.68 Aligned_cols=26 Identities=23% Similarity=0.450 Sum_probs=19.0
Q ss_pred CCEEEEEeC--HhhHHHHHh-CCCeecCC
Q 025840 211 IGNISLFAD--SQVVDFYRN-LGFEPDPE 236 (247)
Q Consensus 211 ~~~i~L~~n--~~a~~fY~k-~GF~~~~~ 236 (247)
+..+.|.++ +++.+||++ +||+....
T Consensus 5 l~hv~l~v~Dl~~s~~FY~~~lG~~~~~~ 33 (122)
T cd07265 5 PGHVQLRVLDLEEAIKHYREVLGLDEVGR 33 (122)
T ss_pred EeEEEEEeCCHHHHHHHHHhccCCEeeee
Confidence 445667763 569999976 99998654
No 156
>KOG1472 consensus Histone acetyltransferase SAGA/ADA, catalytic subunit PCAF/GCN5 and related proteins [Chromatin structure and dynamics; Transcription]
Probab=27.71 E-value=10 Score=37.39 Aligned_cols=72 Identities=17% Similarity=0.202 Sum_probs=57.6
Q ss_pred EEEEEEEE-eCCCCcEEEEEEEECCCCCCCCHHHHHHHHHHHHHHhCC-CCEEEEEeCHhhHHHHHhCCCeecC
Q 025840 164 LIGMARAT-SDHAFNATIWDVLVDPSYQGQGLGKALVEKVVRALLQKD-IGNISLFADSQVVDFYRNLGFEPDP 235 (247)
Q Consensus 164 iVG~~~~~-~~~~~~~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g-~~~i~L~~n~~a~~fY~k~GF~~~~ 235 (247)
+||-++.. +...+...|..-+|.-+.|-+|.|+-||++..+..+..+ +......++..|+..+++.||...-
T Consensus 431 ~vggi~~r~f~~k~f~eivf~av~~~eqv~g~g~hlmnhlkd~~~~~~~i~~~ltyad~~aigyfkkqgfs~ei 504 (720)
T KOG1472|consen 431 VVGGICFRPFPEKGFTEIVFCAVTTDEQVKGSGTHLMNHLKDYVRSSSTIDYALTYADEGAIGYFKKQGFSKEI 504 (720)
T ss_pred cccccccCcCcccCCcceeeccccCcccccccCcCchhhHHHHhhccchHHHHHHhhhhcccccccCccchhhc
Confidence 66655543 445567889899999999999999999999999998865 5555555788899999999998643
No 157
>PF13466 STAS_2: STAS domain
Probab=27.02 E-value=1.8e+02 Score=19.34 Aligned_cols=38 Identities=13% Similarity=0.040 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHHHhCCCCEEEEEeCHhhHHHHHhCCC
Q 025840 194 LGKALVEKVVRALLQKDIGNISLFADSQVVDFYRNLGF 231 (247)
Q Consensus 194 lG~~Ll~~~~~~a~~~g~~~i~L~~n~~a~~fY~k~GF 231 (247)
-|-+++-.+.+.+++.|.+-.....++...++.+..|+
T Consensus 42 agl~lL~~~~~~~~~~g~~~~l~~~~~~~~~ll~~~gl 79 (80)
T PF13466_consen 42 AGLQLLLAAARRARARGRQLRLTGPSPALRRLLELLGL 79 (80)
T ss_pred HHHHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhCc
Confidence 35678888888888888664444468888899998887
No 158
>PF01740 STAS: STAS domain; InterPro: IPR002645 The STAS (Sulphate Transporter and AntiSigma factor antagonist) domain is found in the C-terminal region of sulphate transporters and bacterial anti-sigma factor antagonists. It has been suggested that this domain may have a general NTP binding function. The establishment of differential gene expression in sporulating Bacillus subtilis involves four protein components one of which is SpoIIAA (P10727 from SWISSPROT). The four components regulate the sporulation sigma factor F. Early in sporulation, SpoIIAA is in the phosphorylated state (SpoIIAA-P), as a result of the activity of the ATP-dependent protein kinase SpoIIAB (P10728 from SWISSPROT). The site at which this protein is a conserved serine. SpoIIAB is an anti-sigma factor that in its free form inhibits F by binding to it. Competition by SpoIIAA (the anti-anti-sigma factor) for binding to SpoIIAB releases Sigma F activity []. The STAS domain is found in the anti-sigma factor antagonist SpoIIAA.; PDB: 3T6O_B 3LKL_B 1H4Z_A 1H4Y_B 1H4X_B 3NY7_A 3OIZ_A 1T6R_A 1VC1_B 1SBO_A ....
Probab=26.66 E-value=1e+02 Score=22.34 Aligned_cols=39 Identities=10% Similarity=0.202 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHhCCCCEEEEEeCHhhHHHHHhCCCee
Q 025840 195 GKALVEKVVRALLQKDIGNISLFADSQVVDFYRNLGFEP 233 (247)
Q Consensus 195 G~~Ll~~~~~~a~~~g~~~i~L~~n~~a~~fY~k~GF~~ 233 (247)
|-..+..+.+.++.+|..-.....++...+.+++.||..
T Consensus 65 gi~~L~~~~~~~~~~g~~~~l~~~~~~v~~~l~~~~~~~ 103 (117)
T PF01740_consen 65 GIQALVDIIKELRRRGVQLVLVGLNPDVRRILERSGLID 103 (117)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEESHHHHHHHHHHHTTGHH
T ss_pred HHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCCh
Confidence 456788888999999987555556888999999999874
No 159
>cd07252 BphC1-RGP6_N_like N-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1.13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the N-terminal, non-catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of 2,3-dihydroxybiphenyl 1,2-dioxygenases. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its N-
Probab=26.66 E-value=61 Score=23.54 Aligned_cols=23 Identities=13% Similarity=0.127 Sum_probs=15.9
Q ss_pred EEEEeCHhhHHHHHh-CCCeecCC
Q 025840 214 ISLFADSQVVDFYRN-LGFEPDPE 236 (247)
Q Consensus 214 i~L~~n~~a~~fY~k-~GF~~~~~ 236 (247)
+.+.-=.+|.+||+. +||+....
T Consensus 8 l~v~Dl~~s~~FY~~~LG~~~~~~ 31 (120)
T cd07252 8 VESSDLDAWRRFATDVLGLQVGDR 31 (120)
T ss_pred EEeCCHHHHHHHHHhccCceeccC
Confidence 334333569999977 89998654
No 160
>PF04339 DUF482: Protein of unknown function, DUF482; InterPro: IPR007434 This family contains several proteins of uncharacterised function.
Probab=26.35 E-value=1.5e+02 Score=27.19 Aligned_cols=53 Identities=15% Similarity=0.282 Sum_probs=44.9
Q ss_pred EEEECCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEE-eCHhhHHHHHhCCCeec
Q 025840 182 DVLVDPSYQGQGLGKALVEKVVRALLQKDIGNISLF-ADSQVVDFYRNLGFEPD 234 (247)
Q Consensus 182 ~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g~~~i~L~-~n~~a~~fY~k~GF~~~ 234 (247)
.+.++|......+...|++.+.+.+++.|+..+.+. +++.-....+..||..-
T Consensus 105 R~l~~~~~~~~~~~~~L~~~~~~~a~~~~~Ss~h~lF~~~~~~~~l~~~G~~~r 158 (370)
T PF04339_consen 105 RLLIAPGADRAALRAALLQALEQLAEENGLSSWHILFPDEEDAAALEEAGFLSR 158 (370)
T ss_pred ceeECCCCCHHHHHHHHHHHHHHHHHHcCCCcceeecCCHHHHHHHHhCCCcee
Confidence 477889999999999999999999999999877655 67776677889999874
No 161
>PRK01346 hypothetical protein; Provisional
Probab=25.47 E-value=5.1e+02 Score=23.44 Aligned_cols=41 Identities=15% Similarity=0.144 Sum_probs=24.1
Q ss_pred CCCeEEEEEEEEeCCC-------CcEEEEEEEE-CCCCCCCCHHHHHHHHHHHH
Q 025840 160 EQRTLIGMARATSDHA-------FNATIWDVLV-DPSYQGQGLGKALVEKVVRA 205 (247)
Q Consensus 160 ~~g~iVG~~~~~~~~~-------~~~~I~~l~V-~p~~Rg~GlG~~Ll~~~~~~ 205 (247)
++|+++||+....... ....|..+.. +|+.+ +.|+..+..+
T Consensus 217 ~~g~~~Gy~~y~~~~~~~~~~~~~~l~V~e~~~~~~~a~-----~~L~~fl~~~ 265 (411)
T PRK01346 217 DDGEVDGYALYRVDDTWGFRGPDGTVEVEELVAATPAAY-----AALWRFLLSL 265 (411)
T ss_pred CCCcccEEEEEEEcCcccccCCCceEEEEEEEeCCHHHH-----HHHHHHHhhC
Confidence 4899999998866432 2456655443 34433 3455555444
No 162
>cd07240 ED_TypeI_classII_N N-terminal domain of type I, class II extradiol dioxygenases; non-catalytic domain. This family contains the N-terminal, non-catalytic, domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this fa
Probab=24.56 E-value=1.2e+02 Score=21.36 Aligned_cols=27 Identities=26% Similarity=0.458 Sum_probs=19.7
Q ss_pred CCEEEEEe-C-HhhHHHHHh-CCCeecCCc
Q 025840 211 IGNISLFA-D-SQVVDFYRN-LGFEPDPEG 237 (247)
Q Consensus 211 ~~~i~L~~-n-~~a~~fY~k-~GF~~~~~~ 237 (247)
+..+.+.+ | .++++||++ +||+.....
T Consensus 3 l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~ 32 (117)
T cd07240 3 IAYAELEVPDLERALEFYTDVLGLTVLDRD 32 (117)
T ss_pred eeEEEEecCCHHHHHHHHHhccCcEEEeec
Confidence 34566665 3 569999988 999987654
No 163
>PF02388 FemAB: FemAB family; InterPro: IPR003447 The femAB operon codes for two nearly identical approximately 50kDa proteins involved in the formation of the Staphylococcal pentaglycine interpeptide bridge in peptidoglycan []. These proteins are also considered as a factor influencing the level of methicillin resistance [].; GO: 0016755 transferase activity, transferring amino-acyl groups; PDB: 1XE4_A 1NE9_A 3GKR_A 1XIX_A 1P4N_A 1XF8_A 1LRZ_A.
Probab=24.26 E-value=1.5e+02 Score=27.32 Aligned_cols=75 Identities=15% Similarity=0.153 Sum_probs=43.8
Q ss_pred CCCeEEEEEEEEeC--C-C-CcEEEEEEEECC--CCCCCCHHHHHHHHHHHHHHhCCCCEEEEEe---------------
Q 025840 160 EQRTLIGMARATSD--H-A-FNATIWDVLVDP--SYQGQGLGKALVEKVVRALLQKDIGNISLFA--------------- 218 (247)
Q Consensus 160 ~~g~iVG~~~~~~~--~-~-~~~~I~~l~V~p--~~Rg~GlG~~Ll~~~~~~a~~~g~~~i~L~~--------------- 218 (247)
++++|+|.+.+... . . ..++|. =-| +|...-+-..+++.+.+.++++++-.+.++-
T Consensus 43 d~~~v~aa~ll~~~~~~~g~~~~yip---rGPv~d~~d~ell~~f~~~Lk~~akk~~a~~lridP~~~~~~~~~~g~~~~ 119 (406)
T PF02388_consen 43 DGGEVAAAALLLRKKPFKGFKYAYIP---RGPVMDYSDEELLEFFLEELKKYAKKKRALFLRIDPNVIYQERDEDGEPIE 119 (406)
T ss_dssp TTS-EEEEEEEEEEECTTTCEEEEET---T--EC-TT-HHHHHHHHHHHHHHHCTTTEEEEEE--S-EEECE-TTS-EEE
T ss_pred CCCeEEEEEEEEEeccCCceeEEEEC---CCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEeCchhhhhccccccccc
Confidence 34777777655322 1 1 123332 224 7778888888899999998887765555541
Q ss_pred ---CHhhHHHHHhCCCeecCCc
Q 025840 219 ---DSQVVDFYRNLGFEPDPEG 237 (247)
Q Consensus 219 ---n~~a~~fY~k~GF~~~~~~ 237 (247)
|...+..++++||+..+..
T Consensus 120 ~~~~~~~~~~l~~~G~~~~g~~ 141 (406)
T PF02388_consen 120 GEENDELIENLKALGFRHQGFT 141 (406)
T ss_dssp E-S-THHHHHHHHTT-CCTS-S
T ss_pred CcchHHHHHHHHhcCceecCcc
Confidence 3457899999999987643
No 164
>cd07041 STAS_RsbR_RsbS_like Sulphate Transporter and Anti-Sigma factor antagonist domain of the "stressosome" complex proteins RsbS and RsbR, regulators of the bacterial stress activated alternative sigma factor sigma-B by phosphorylation. The STAS (Sulphate Transporter and Anti-Sigma factor antagonist) domain of proteins related to RsbS and RsbR which are part of the "stressosome" complex that plays an important role in the regulation of the bacterial stress activated alternative sigma factor sigma-B. During stress conditions RsbS and RsbR are phosphorylated which leads to the release of RsbT, an activator of of the RsbU phosphatase, which in turn activates RsbV which leads to the release and activation of sigma factor B. RsbS is a single domain protein (STAS domain), while RsbR-like proteins have a well-conserved C-terminal STATS domain and a variable N-terminal domain. The STAS domain is also found in the C- terminal region of sulphate transporters and anti-anti-sigma factors.
Probab=23.57 E-value=2.4e+02 Score=20.07 Aligned_cols=39 Identities=18% Similarity=0.095 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHhCCCCEEEEEeCHhhHHHHHhCCCee
Q 025840 195 GKALVEKVVRALLQKDIGNISLFADSQVVDFYRNLGFEP 233 (247)
Q Consensus 195 G~~Ll~~~~~~a~~~g~~~i~L~~n~~a~~fY~k~GF~~ 233 (247)
|-.++..+.+.++..|.+-.....++...+.+++.|+..
T Consensus 58 g~~~l~~~~~~~~~~g~~l~l~g~~~~v~~~l~~~gl~~ 96 (109)
T cd07041 58 VARHLLRLARALRLLGARTILTGIRPEVAQTLVELGIDL 96 (109)
T ss_pred HHHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHhCCCh
Confidence 445778888888888977555556899999999999865
No 165
>PF08901 DUF1847: Protein of unknown function (DUF1847); InterPro: IPR014997 This group of proteins are functionally uncharacterised. They contain 4 N-terminal cysteines that may form a zinc-binding domain.
Probab=23.15 E-value=1.5e+02 Score=23.63 Aligned_cols=36 Identities=17% Similarity=0.214 Sum_probs=27.2
Q ss_pred HHHHHHHHHhCCCCEEEEEe-----CH--hhHHHHHhCCCeec
Q 025840 199 VEKVVRALLQKDIGNISLFA-----DS--QVVDFYRNLGFEPD 234 (247)
Q Consensus 199 l~~~~~~a~~~g~~~i~L~~-----n~--~a~~fY~k~GF~~~ 234 (247)
+++.++.|+..|.+++.+-. ++ ...++.+..||++.
T Consensus 43 veEiieFak~mgykkiGiAfCiGL~~EA~~~~~iL~~~gFev~ 85 (157)
T PF08901_consen 43 VEEIIEFAKRMGYKKIGIAFCIGLRKEARILAKILEANGFEVY 85 (157)
T ss_pred HHHHHHHHHHcCCCeeeehhhHhHHHHHHHHHHHHHHCCCEEE
Confidence 67888899999999888763 22 25567788999974
No 166
>cd08361 PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC). This subfamily contains the N-terminal, non-catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.
Probab=21.84 E-value=1.5e+02 Score=21.59 Aligned_cols=26 Identities=23% Similarity=0.372 Sum_probs=18.9
Q ss_pred CCEEEEEe-C-HhhHHHHHh-CCCeecCC
Q 025840 211 IGNISLFA-D-SQVVDFYRN-LGFEPDPE 236 (247)
Q Consensus 211 ~~~i~L~~-n-~~a~~fY~k-~GF~~~~~ 236 (247)
+..+.+.+ | ..+.+||++ +||+....
T Consensus 7 l~~v~l~v~d~~~s~~FY~~vLG~~~~~~ 35 (124)
T cd08361 7 IAYVRLGTRDLAGATRFATDILGLQVAER 35 (124)
T ss_pred eeEEEEeeCCHHHHHHHHHhccCceeccC
Confidence 44566766 3 459999977 89998654
No 167
>COG1212 KdsB CMP-2-keto-3-deoxyoctulosonic acid synthetase [Cell envelope biogenesis, outer membrane]
Probab=21.16 E-value=1.8e+02 Score=24.92 Aligned_cols=41 Identities=17% Similarity=0.314 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHHhCCCCEEEEEe-CHhhHHHHHhCCCeecC
Q 025840 195 GKALVEKVVRALLQKDIGNISLFA-DSQVVDFYRNLGFEPDP 235 (247)
Q Consensus 195 G~~Ll~~~~~~a~~~g~~~i~L~~-n~~a~~fY~k~GF~~~~ 235 (247)
|+-|+.++.+++.+.|+.++.+-+ ++.-..--+++|++.+=
T Consensus 27 GkpmI~rV~e~a~~s~~~rvvVATDde~I~~av~~~G~~avm 68 (247)
T COG1212 27 GKPMIVRVAERALKSGADRVVVATDDERIAEAVQAFGGEAVM 68 (247)
T ss_pred CchHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCEEEe
Confidence 678999999999998999888887 45555556778888653
No 168
>PF02388 FemAB: FemAB family; InterPro: IPR003447 The femAB operon codes for two nearly identical approximately 50kDa proteins involved in the formation of the Staphylococcal pentaglycine interpeptide bridge in peptidoglycan []. These proteins are also considered as a factor influencing the level of methicillin resistance [].; GO: 0016755 transferase activity, transferring amino-acyl groups; PDB: 1XE4_A 1NE9_A 3GKR_A 1XIX_A 1P4N_A 1XF8_A 1LRZ_A.
Probab=20.69 E-value=4.7e+02 Score=23.98 Aligned_cols=56 Identities=13% Similarity=-0.104 Sum_probs=41.1
Q ss_pred CCeEEEEEEEEeCCCCcEEEEEEEECCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEE
Q 025840 161 QRTLIGMARATSDHAFNATIWDVLVDPSYQGQGLGKALVEKVVRALLQKDIGNISLF 217 (247)
Q Consensus 161 ~g~iVG~~~~~~~~~~~~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g~~~i~L~ 217 (247)
++.+++.+.+...+. .++--.-+-+++|+.-+-...|.-+++++|.++|+..-...
T Consensus 301 ~~~~la~~l~~~~g~-~~~yly~gs~~~~~~~~~~~~l~~~~i~~a~~~G~~~ydf~ 356 (406)
T PF02388_consen 301 DEIPLAGALFIYYGD-EAYYLYGGSDEEYRKFYAPYLLQWEAIKYAKEKGIKRYDFG 356 (406)
T ss_dssp SEEEEEEEEEEEETT-EEEEEEEEE-CGCGGCTHHHHHHHHHHHHHHHTT-SEEEEE
T ss_pred CcceEEEEEEEEECC-EEEEEECccchhhHhcCcchHHHHHHHHHHHHCCCCEEEee
Confidence 334555555544444 44444778999999999999999999999999999988776
No 169
>COG1504 Uncharacterized conserved protein [Function unknown]
Probab=20.31 E-value=3.4e+02 Score=20.44 Aligned_cols=68 Identities=18% Similarity=0.232 Sum_probs=41.8
Q ss_pred EEEEEEEeCCCCcEEEEEEEECCC-----------CCCCCHHHHHHHHHHHHHHhCCCCEEEEE--------eCHhhHHH
Q 025840 165 IGMARATSDHAFNATIWDVLVDPS-----------YQGQGLGKALVEKVVRALLQKDIGNISLF--------ADSQVVDF 225 (247)
Q Consensus 165 VG~~~~~~~~~~~~~I~~l~V~p~-----------~Rg~GlG~~Ll~~~~~~a~~~g~~~i~L~--------~n~~a~~f 225 (247)
++|..+..++. -+-.+|.|.|+ .|.-|-...|...=++.....+...+.+. ..+.|..|
T Consensus 7 ~~FG~v~i~Gk--~f~~DIvi~~dG~v~rr~K~lskrK~GTSHkl~~eEle~~lee~~E~ivvGTG~~G~l~l~~ea~e~ 84 (121)
T COG1504 7 TSFGSVTIGGK--DFEHDIVIRPDGKVERREKELSKRKYGTSHKLALEELEELLEEGPEVIVVGTGQSGMLELSEEAREF 84 (121)
T ss_pred cceeeEEECCE--eccccEEEecCCceehhhhhhhhhhcCcccccCHHHHHHHHhcCCcEEEEecCceeEEEeCHHHHHH
Confidence 34555554443 35567888888 23333335555555555556676666555 36889999
Q ss_pred HHhCCCeec
Q 025840 226 YRNLGFEPD 234 (247)
Q Consensus 226 Y~k~GF~~~ 234 (247)
+++.|-+..
T Consensus 85 ~r~k~~~vi 93 (121)
T COG1504 85 FRKKGCEVI 93 (121)
T ss_pred HHhcCCeEE
Confidence 999885543
No 170
>cd04789 HTH_Cfa Helix-Turn-Helix DNA binding domain of the Cfa transcription regulator. Putative helix-turn-helix (HTH) MerR-like transcription regulator; the N-terminal domain of Cfa, a cyclopropane fatty acid synthase and other related methyltransferases. Based on sequence similarity, these proteins are predicted to function as transcription regulators that mediate responses to stress in eubacteria. They belong to the MerR superfamily of transcription regulators that promote transcription of various stress regulons by reconfiguring the operator sequence located between the -35 and -10 promoter elements. A typical MerR regulator is comprised of distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their N-terminal domains are homologous and contain a DNA-binding winged HTH motif, while the C-terminal domains are often dissimilar and bind specific coactivator molecules such as metal ions, drugs, and organic substrates.
Probab=20.19 E-value=92 Score=22.56 Aligned_cols=27 Identities=19% Similarity=0.388 Sum_probs=19.8
Q ss_pred CHhhHHHHHhCCCeecCCceeeeEecC
Q 025840 219 DSQVVDFYRNLGFEPDPEGIKGMFWHP 245 (247)
Q Consensus 219 n~~a~~fY~k~GF~~~~~~~~~~~w~~ 245 (247)
++.++++|++.|.-+......+.++|.
T Consensus 14 s~~tlR~ye~~Gll~~~r~~~g~R~Y~ 40 (102)
T cd04789 14 SRSTLLYYEKLGLITGTRNANGYRLYP 40 (102)
T ss_pred CHHHHHHHHHCCCCCCCcCCCCCeeCC
Confidence 678899999999987544445666664
Done!