Query 025842
Match_columns 247
No_of_seqs 148 out of 1444
Neff 10.4
Searched_HMMs 46136
Date Fri Mar 29 10:10:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025842.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/025842hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG3043 Predicted hydrolase re 100.0 9.4E-34 2E-38 208.5 21.1 235 5-244 5-242 (242)
2 PF01738 DLH: Dienelactone hyd 100.0 4.6E-32 1E-36 209.8 18.1 209 30-243 1-218 (218)
3 COG0412 Dienelactone hydrolase 100.0 6.1E-28 1.3E-32 187.3 21.8 214 28-244 12-235 (236)
4 COG1647 Esterase/lipase [Gener 99.9 1.5E-25 3.3E-30 165.1 14.8 176 41-240 13-242 (243)
5 PRK13604 luxD acyl transferase 99.9 1.1E-24 2.3E-29 172.5 19.0 172 30-216 22-248 (307)
6 PHA02857 monoglyceride lipase; 99.9 2.3E-24 5E-29 172.6 21.2 196 25-242 6-273 (276)
7 PLN02385 hydrolase; alpha/beta 99.9 3.2E-24 6.9E-29 177.3 21.6 201 24-244 66-347 (349)
8 COG1506 DAP2 Dipeptidyl aminop 99.9 1.5E-24 3.3E-29 190.5 19.6 200 30-245 378-619 (620)
9 PRK10566 esterase; Provisional 99.9 6.4E-24 1.4E-28 167.6 20.8 197 27-243 9-249 (249)
10 KOG1455 Lysophospholipase [Lip 99.9 3.9E-24 8.4E-29 165.2 18.4 203 20-242 28-312 (313)
11 PLN02298 hydrolase, alpha/beta 99.9 7.4E-24 1.6E-28 173.9 21.3 205 22-245 35-320 (330)
12 PRK10749 lysophospholipase L2; 99.9 4E-23 8.7E-28 169.4 21.8 208 22-242 33-329 (330)
13 PLN02652 hydrolase; alpha/beta 99.9 1.1E-22 2.3E-27 169.5 19.6 182 40-244 133-389 (395)
14 PF00326 Peptidase_S9: Prolyl 99.9 1.8E-23 3.8E-28 161.3 13.9 166 61-245 4-212 (213)
15 COG2267 PldB Lysophospholipase 99.9 6.1E-22 1.3E-26 159.1 21.2 207 19-245 9-297 (298)
16 PRK00870 haloalkane dehalogena 99.9 6E-22 1.3E-26 160.7 20.2 200 14-242 14-301 (302)
17 PLN02824 hydrolase, alpha/beta 99.9 6.4E-22 1.4E-26 159.9 19.2 194 23-242 11-294 (294)
18 PRK05077 frsA fermentation/res 99.9 1.2E-21 2.6E-26 164.4 20.4 181 30-243 181-413 (414)
19 TIGR02240 PHA_depoly_arom poly 99.9 9.3E-22 2E-26 157.6 18.9 189 23-243 5-267 (276)
20 PRK11460 putative hydrolase; P 99.9 9.8E-22 2.1E-26 153.1 17.4 183 40-244 13-210 (232)
21 TIGR03343 biphenyl_bphD 2-hydr 99.9 2E-21 4.3E-26 156.0 18.0 179 30-240 20-281 (282)
22 PF12695 Abhydrolase_5: Alpha/ 99.9 1.4E-21 3.1E-26 141.3 14.1 141 45-212 1-145 (145)
23 TIGR03611 RutD pyrimidine util 99.9 5.3E-21 1.2E-25 150.8 17.5 170 41-240 11-256 (257)
24 PRK10673 acyl-CoA esterase; Pr 99.9 1.1E-20 2.3E-25 149.5 18.9 172 38-241 11-254 (255)
25 TIGR03056 bchO_mg_che_rel puta 99.9 2.2E-20 4.8E-25 149.3 20.3 188 22-240 8-278 (278)
26 PRK03592 haloalkane dehalogena 99.9 2.3E-20 5E-25 150.9 19.7 189 22-244 9-291 (295)
27 TIGR01250 pro_imino_pep_2 prol 99.9 3.4E-20 7.3E-25 148.4 19.5 188 24-240 6-288 (288)
28 PLN02679 hydrolase, alpha/beta 99.9 2.8E-20 6E-25 154.3 19.0 193 22-241 63-356 (360)
29 PLN02965 Probable pheophorbida 99.9 2.7E-20 5.9E-25 147.4 18.0 169 44-241 4-252 (255)
30 TIGR02427 protocat_pcaD 3-oxoa 99.9 2.9E-20 6.3E-25 145.7 15.2 168 42-240 12-251 (251)
31 TIGR01607 PST-A Plasmodium sub 99.9 5.1E-20 1.1E-24 150.9 17.0 195 26-240 4-331 (332)
32 TIGR03100 hydr1_PEP hydrolase, 99.9 5.2E-20 1.1E-24 147.1 16.5 184 30-240 14-273 (274)
33 PRK10349 carboxylesterase BioH 99.8 6.6E-20 1.4E-24 145.2 16.6 161 44-240 14-254 (256)
34 PF02230 Abhydrolase_2: Phosph 99.8 7E-20 1.5E-24 141.4 14.7 187 38-243 9-216 (216)
35 KOG4178 Soluble epoxide hydrol 99.8 7.7E-19 1.7E-23 138.0 20.3 191 23-242 25-320 (322)
36 PRK10162 acetyl esterase; Prov 99.8 5.2E-19 1.1E-23 144.1 19.9 190 29-244 68-317 (318)
37 PRK03204 haloalkane dehalogena 99.8 4.9E-19 1.1E-23 142.5 19.4 187 20-239 14-285 (286)
38 TIGR02821 fghA_ester_D S-formy 99.8 6.6E-19 1.4E-23 140.8 19.8 199 30-243 27-275 (275)
39 PLN03087 BODYGUARD 1 domain co 99.8 9.9E-19 2.2E-23 147.9 20.9 187 26-240 182-477 (481)
40 TIGR01738 bioH putative pimelo 99.8 1.8E-19 3.9E-24 140.7 14.8 161 43-239 4-245 (245)
41 PF05448 AXE1: Acetyl xylan es 99.8 1.9E-19 4.2E-24 145.5 15.1 193 30-242 69-320 (320)
42 KOG2984 Predicted hydrolase [G 99.8 5.5E-20 1.2E-24 133.8 10.5 192 22-241 23-275 (277)
43 PLN02578 hydrolase 99.8 1.5E-18 3.1E-23 143.8 19.8 183 23-240 69-353 (354)
44 PRK10985 putative hydrolase; P 99.8 9.8E-19 2.1E-23 143.1 17.7 183 42-245 57-323 (324)
45 TIGR01836 PHA_synth_III_C poly 99.8 3.2E-18 6.9E-23 141.6 18.7 199 19-241 37-349 (350)
46 PLN03084 alpha/beta hydrolase 99.8 5.6E-18 1.2E-22 140.5 19.9 186 23-240 108-382 (383)
47 KOG1552 Predicted alpha/beta h 99.8 2.9E-18 6.3E-23 130.3 16.4 184 30-244 48-254 (258)
48 PLN02511 hydrolase 99.8 2.4E-18 5.2E-23 143.8 17.1 182 42-243 99-366 (388)
49 PLN02442 S-formylglutathione h 99.8 5.6E-18 1.2E-22 135.8 18.6 202 29-244 31-282 (283)
50 PRK11126 2-succinyl-6-hydroxy- 99.8 2.1E-18 4.5E-23 135.4 15.6 160 43-241 2-241 (242)
51 PRK06489 hypothetical protein; 99.8 3.1E-18 6.7E-23 142.2 17.4 192 27-244 47-359 (360)
52 TIGR03695 menH_SHCHC 2-succiny 99.8 1.8E-18 4E-23 135.2 15.2 165 44-239 2-250 (251)
53 PLN02211 methyl indole-3-aceta 99.8 9.8E-18 2.1E-22 133.9 19.4 181 28-240 5-268 (273)
54 PLN02872 triacylglycerol lipas 99.8 1.5E-18 3.2E-23 144.2 13.9 190 42-245 73-392 (395)
55 PRK14875 acetoin dehydrogenase 99.8 5.3E-18 1.1E-22 141.4 17.3 183 24-241 113-370 (371)
56 PRK08775 homoserine O-acetyltr 99.8 7.8E-19 1.7E-23 144.8 12.0 184 27-242 43-339 (343)
57 PRK07581 hypothetical protein; 99.8 2.6E-18 5.7E-23 141.6 14.4 199 26-244 22-338 (339)
58 PF12697 Abhydrolase_6: Alpha/ 99.8 3.3E-18 7.1E-23 131.8 13.7 150 46-215 1-219 (228)
59 PLN02894 hydrolase, alpha/beta 99.8 3.9E-17 8.6E-22 137.0 20.5 180 39-245 101-388 (402)
60 PRK11071 esterase YqiA; Provis 99.8 1.4E-17 3.1E-22 125.6 16.0 151 44-240 2-189 (190)
61 PLN00021 chlorophyllase 99.8 1.6E-16 3.4E-21 128.4 23.0 197 28-246 37-287 (313)
62 PRK10115 protease 2; Provision 99.8 5.5E-17 1.2E-21 144.0 20.5 200 27-244 424-677 (686)
63 PF06500 DUF1100: Alpha/beta h 99.8 9.8E-18 2.1E-22 137.0 13.5 180 30-243 177-410 (411)
64 COG0400 Predicted esterase [Ge 99.8 4E-17 8.7E-22 123.2 14.4 178 42-243 17-206 (207)
65 COG0429 Predicted hydrolase of 99.8 6.3E-17 1.4E-21 127.1 15.8 197 30-245 62-343 (345)
66 KOG1454 Predicted hydrolase/ac 99.8 3.4E-17 7.3E-22 133.1 14.9 175 41-243 56-325 (326)
67 TIGR01249 pro_imino_pep_1 prol 99.8 1.5E-16 3.3E-21 129.2 18.8 185 24-242 9-305 (306)
68 KOG4391 Predicted alpha/beta h 99.8 1.9E-17 4.1E-22 122.0 11.9 184 30-244 67-284 (300)
69 COG3458 Acetyl esterase (deace 99.8 9E-18 2E-22 127.7 10.4 193 30-241 69-316 (321)
70 TIGR01840 esterase_phb esteras 99.7 3.6E-17 7.9E-22 125.9 13.6 154 33-195 2-196 (212)
71 COG0657 Aes Esterase/lipase [L 99.7 7.3E-16 1.6E-20 125.6 20.5 185 30-242 64-310 (312)
72 PRK00175 metX homoserine O-ace 99.7 2.6E-16 5.6E-21 131.4 16.7 69 164-243 306-375 (379)
73 COG2945 Predicted hydrolase of 99.7 4.9E-16 1.1E-20 112.6 14.8 171 40-240 25-205 (210)
74 PRK05855 short chain dehydroge 99.7 4.2E-16 9.1E-21 137.3 17.4 191 22-242 5-292 (582)
75 TIGR01392 homoserO_Ac_trn homo 99.7 1.3E-16 2.9E-21 132.0 13.3 199 26-240 12-351 (351)
76 TIGR03101 hydr2_PEP hydrolase, 99.7 3.3E-15 7.1E-20 117.8 20.5 167 30-209 12-243 (266)
77 COG3571 Predicted hydrolase of 99.7 2E-15 4.3E-20 106.1 16.8 185 38-241 8-210 (213)
78 PF08840 BAAT_C: BAAT / Acyl-C 99.7 2.5E-16 5.4E-21 120.8 13.3 135 109-244 4-212 (213)
79 PRK07868 acyl-CoA synthetase; 99.7 9.5E-16 2.1E-20 142.1 18.8 201 19-244 38-363 (994)
80 KOG4409 Predicted hydrolase/ac 99.7 1.3E-15 2.9E-20 120.3 16.3 187 28-241 74-363 (365)
81 PLN02980 2-oxoglutarate decarb 99.7 1.4E-15 3.1E-20 145.8 18.8 183 42-243 1370-1640(1655)
82 TIGR01838 PHA_synth_I poly(R)- 99.7 6.4E-15 1.4E-19 126.1 18.7 176 22-216 166-459 (532)
83 KOG4667 Predicted esterase [Li 99.7 9.3E-16 2E-20 113.0 11.4 159 41-216 31-243 (269)
84 KOG2100 Dipeptidyl aminopeptid 99.7 1.3E-14 2.7E-19 129.6 18.8 203 26-244 504-749 (755)
85 PF07859 Abhydrolase_3: alpha/ 99.6 3.2E-15 6.8E-20 115.0 12.6 148 46-214 1-210 (211)
86 KOG1515 Arylacetamide deacetyl 99.6 5.4E-14 1.2E-18 113.6 19.5 191 26-242 70-335 (336)
87 COG4757 Predicted alpha/beta h 99.6 4.9E-15 1.1E-19 110.4 12.3 186 30-239 18-280 (281)
88 PF03403 PAF-AH_p_II: Platelet 99.6 8.3E-15 1.8E-19 121.3 14.5 199 41-244 98-360 (379)
89 KOG2281 Dipeptidyl aminopeptid 99.6 5.2E-14 1.1E-18 118.6 16.6 196 30-241 626-866 (867)
90 KOG2382 Predicted alpha/beta h 99.6 1.8E-14 3.8E-19 113.6 13.0 176 39-242 48-313 (315)
91 TIGR00976 /NonD putative hydro 99.6 6.5E-14 1.4E-18 122.3 17.2 115 30-157 9-132 (550)
92 PF12740 Chlorophyllase2: Chlo 99.6 4.3E-13 9.3E-18 103.8 18.3 192 32-246 6-254 (259)
93 KOG1838 Alpha/beta hydrolase [ 99.6 1.8E-13 3.9E-18 111.5 16.3 183 41-243 123-389 (409)
94 PF12715 Abhydrolase_7: Abhydr 99.6 3.9E-15 8.5E-20 120.0 6.5 173 30-208 101-343 (390)
95 PRK05371 x-prolyl-dipeptidyl a 99.6 1.3E-13 2.8E-18 123.5 16.6 162 62-246 270-523 (767)
96 KOG2564 Predicted acetyltransf 99.6 6.1E-14 1.3E-18 107.5 11.8 114 29-154 61-179 (343)
97 TIGR01839 PHA_synth_II poly(R) 99.6 5.3E-13 1.2E-17 113.5 18.0 175 22-214 193-483 (560)
98 PRK06765 homoserine O-acetyltr 99.5 1.1E-13 2.5E-18 115.2 12.1 66 165-241 321-387 (389)
99 PF02129 Peptidase_S15: X-Pro 99.5 3.2E-13 6.9E-18 107.9 13.6 167 30-212 5-271 (272)
100 PF02273 Acyl_transf_2: Acyl t 99.5 1.1E-12 2.3E-17 98.9 15.3 178 23-215 5-240 (294)
101 PF08538 DUF1749: Protein of u 99.5 1.4E-13 3.1E-18 108.4 10.1 198 22-240 11-303 (303)
102 KOG3847 Phospholipase A2 (plat 99.5 1.9E-12 4.2E-17 100.7 14.1 199 40-245 115-374 (399)
103 PF05728 UPF0227: Uncharacteri 99.5 4.5E-12 9.7E-17 94.7 15.3 148 46-239 2-186 (187)
104 PF06821 Ser_hydrolase: Serine 99.5 2.8E-12 6.1E-17 94.7 14.0 137 46-216 1-157 (171)
105 PF10503 Esterase_phd: Esteras 99.5 1.9E-12 4E-17 99.0 12.7 154 33-194 4-196 (220)
106 PF00561 Abhydrolase_1: alpha/ 99.5 5.5E-13 1.2E-17 103.4 9.9 128 72-215 1-218 (230)
107 PF07224 Chlorophyllase: Chlor 99.4 1.8E-11 3.9E-16 93.4 15.7 195 30-246 33-278 (307)
108 KOG2551 Phospholipase/carboxyh 99.4 1.9E-11 4.1E-16 91.1 15.1 182 42-244 4-222 (230)
109 PF03959 FSH1: Serine hydrolas 99.4 1.1E-12 2.3E-17 100.9 8.9 167 42-215 3-204 (212)
110 KOG2112 Lysophospholipase [Lip 99.4 1E-11 2.2E-16 91.9 13.0 179 43-241 3-203 (206)
111 COG3208 GrsT Predicted thioest 99.4 1.8E-11 3.9E-16 92.9 14.0 165 41-240 5-234 (244)
112 KOG2624 Triglyceride lipase-ch 99.4 2E-11 4.3E-16 100.8 15.1 195 37-243 67-399 (403)
113 PF03583 LIP: Secretory lipase 99.4 4.8E-11 1E-15 95.9 16.4 66 167-246 219-285 (290)
114 PF06057 VirJ: Bacterial virul 99.4 3E-11 6.5E-16 88.8 13.2 157 44-240 3-190 (192)
115 PRK10439 enterobactin/ferric e 99.4 1.9E-10 4.1E-15 96.6 19.5 185 30-240 194-407 (411)
116 PF06342 DUF1057: Alpha/beta h 99.3 2.4E-10 5.3E-15 88.6 18.1 139 42-193 34-238 (297)
117 TIGR01849 PHB_depoly_PhaZ poly 99.3 1.2E-10 2.5E-15 96.6 17.5 192 28-242 84-406 (406)
118 COG4099 Predicted peptidase [G 99.3 1.1E-11 2.4E-16 95.9 10.0 112 122-241 267-384 (387)
119 COG4188 Predicted dienelactone 99.3 3.6E-11 7.9E-16 96.6 12.4 161 43-213 70-295 (365)
120 PF09752 DUF2048: Uncharacteri 99.3 1.4E-10 2.9E-15 93.1 14.2 165 42-214 91-330 (348)
121 KOG4627 Kynurenine formamidase 99.3 9.8E-12 2.1E-16 91.3 6.9 157 38-215 62-250 (270)
122 TIGR03502 lipase_Pla1_cef extr 99.2 9.7E-10 2.1E-14 97.7 17.1 100 43-143 449-574 (792)
123 cd00707 Pancreat_lipase_like P 99.1 2.5E-10 5.5E-15 91.1 9.4 108 41-158 34-148 (275)
124 COG3243 PhaC Poly(3-hydroxyalk 99.1 2E-09 4.3E-14 87.8 14.4 190 30-242 93-399 (445)
125 COG3509 LpqC Poly(3-hydroxybut 99.1 4.3E-10 9.2E-15 87.6 9.6 208 30-244 47-309 (312)
126 KOG3101 Esterase D [General fu 99.1 2.9E-10 6.2E-15 84.0 7.0 184 31-215 31-264 (283)
127 PRK04940 hypothetical protein; 99.1 4.5E-09 9.8E-14 77.2 12.1 96 124-240 60-178 (180)
128 KOG3253 Predicted alpha/beta h 99.1 8.8E-09 1.9E-13 87.1 15.2 117 122-243 248-375 (784)
129 PF10230 DUF2305: Uncharacteri 99.1 4.9E-09 1.1E-13 83.3 13.2 165 43-214 2-266 (266)
130 COG3545 Predicted esterase of 99.1 2.8E-08 6.1E-13 71.8 15.3 88 123-216 58-160 (181)
131 TIGR03230 lipo_lipase lipoprot 99.0 3.9E-09 8.5E-14 88.5 12.2 105 42-157 40-154 (442)
132 PF00975 Thioesterase: Thioest 99.0 3.2E-08 7E-13 76.9 16.5 169 44-239 1-229 (229)
133 COG0596 MhpC Predicted hydrola 99.0 2.7E-08 5.8E-13 77.7 15.9 165 43-238 21-278 (282)
134 PF12146 Hydrolase_4: Putative 99.0 2.2E-09 4.9E-14 68.6 7.6 55 30-85 2-58 (79)
135 PF00756 Esterase: Putative es 99.0 1.2E-09 2.5E-14 86.3 7.6 114 112-239 100-251 (251)
136 PF12048 DUF3530: Protein of u 99.0 3E-07 6.5E-12 74.6 20.6 187 40-242 84-309 (310)
137 COG2021 MET2 Homoserine acetyl 98.9 2.7E-08 5.8E-13 80.2 12.0 113 42-157 50-182 (368)
138 PF06028 DUF915: Alpha/beta hy 98.9 6.2E-08 1.3E-12 76.0 12.1 184 42-239 10-252 (255)
139 PF05705 DUF829: Eukaryotic pr 98.8 5.3E-07 1.1E-11 70.8 15.1 168 45-239 1-240 (240)
140 KOG3975 Uncharacterized conser 98.8 5.5E-07 1.2E-11 68.6 14.2 165 41-216 27-287 (301)
141 COG0627 Predicted esterase [Ge 98.8 1.3E-07 2.9E-12 76.3 11.4 109 125-246 153-315 (316)
142 COG2272 PnbA Carboxylesterase 98.7 4E-08 8.6E-13 82.0 8.1 123 29-157 79-217 (491)
143 PF01674 Lipase_2: Lipase (cla 98.7 4.7E-08 1E-12 74.8 7.8 89 44-143 2-94 (219)
144 COG2936 Predicted acyl esteras 98.7 5.3E-07 1.1E-11 77.2 14.1 122 24-157 24-159 (563)
145 COG1505 Serine proteases of th 98.7 5.3E-07 1.1E-11 76.7 13.5 198 28-244 403-648 (648)
146 PF10142 PhoPQ_related: PhoPQ- 98.7 2.9E-06 6.3E-11 69.7 17.0 107 122-245 170-323 (367)
147 COG2819 Predicted hydrolase of 98.7 2.7E-06 5.9E-11 66.1 15.4 107 122-241 135-260 (264)
148 cd00312 Esterase_lipase Estera 98.6 1.5E-07 3.3E-12 81.6 9.3 118 28-157 77-213 (493)
149 COG4814 Uncharacterized protei 98.6 1.8E-06 3.9E-11 66.1 13.6 184 43-240 45-285 (288)
150 PF07819 PGAP1: PGAP1-like pro 98.6 2.6E-07 5.7E-12 71.5 9.4 101 42-156 3-122 (225)
151 PF10340 DUF2424: Protein of u 98.6 5E-06 1.1E-10 68.2 15.3 168 29-213 105-350 (374)
152 PF00135 COesterase: Carboxyle 98.6 1.8E-07 3.9E-12 81.9 7.3 118 30-157 109-245 (535)
153 PF11339 DUF3141: Protein of u 98.5 5.2E-06 1.1E-10 69.9 14.4 51 161-212 291-348 (581)
154 COG1770 PtrB Protease II [Amin 98.5 1.4E-06 3E-11 75.1 10.8 165 40-214 445-658 (682)
155 PF05677 DUF818: Chlamydia CHL 98.4 9.8E-06 2.1E-10 65.0 12.8 139 24-177 116-300 (365)
156 COG2382 Fes Enterochelin ester 98.4 2.4E-05 5.3E-10 61.8 14.4 172 28-215 80-283 (299)
157 PF00151 Lipase: Lipase; Inte 98.4 1E-06 2.3E-11 72.0 6.7 107 42-158 70-188 (331)
158 COG1073 Hydrolases of the alph 98.4 2.8E-05 6.1E-10 62.4 14.9 201 30-243 33-298 (299)
159 PF05990 DUF900: Alpha/beta hy 98.4 1.3E-05 2.9E-10 62.4 12.3 130 41-181 16-167 (233)
160 PF11144 DUF2920: Protein of u 98.3 0.00014 3E-09 60.1 18.6 106 110-216 165-352 (403)
161 PLN02733 phosphatidylcholine-s 98.3 3.6E-06 7.8E-11 71.2 9.5 87 57-157 107-201 (440)
162 COG3150 Predicted esterase [Ge 98.3 1.3E-05 2.7E-10 57.6 10.4 103 117-240 52-187 (191)
163 KOG2237 Predicted serine prote 98.3 6.4E-06 1.4E-10 70.8 10.3 197 30-244 454-707 (712)
164 PRK10252 entF enterobactin syn 98.3 7.6E-06 1.6E-10 79.1 12.0 97 42-155 1067-1169(1296)
165 KOG4840 Predicted hydrolases o 98.3 2.4E-05 5.1E-10 58.9 11.0 99 45-157 37-144 (299)
166 PF03096 Ndr: Ndr family; Int 98.2 0.00014 2.9E-09 57.6 15.4 187 27-241 8-278 (283)
167 KOG2931 Differentiation-relate 98.2 0.00016 3.6E-09 56.8 14.6 185 28-240 32-304 (326)
168 COG3946 VirJ Type IV secretory 98.2 9.6E-05 2.1E-09 60.5 13.7 82 42-139 259-341 (456)
169 COG4782 Uncharacterized protei 98.0 0.00012 2.7E-09 59.2 10.9 129 41-179 114-262 (377)
170 KOG4388 Hormone-sensitive lipa 97.9 0.00027 5.9E-09 60.5 12.0 64 168-235 788-851 (880)
171 COG3319 Thioesterase domains o 97.8 0.00011 2.3E-09 57.8 7.9 97 44-158 1-104 (257)
172 KOG1553 Predicted alpha/beta h 97.7 9.9E-05 2.1E-09 59.3 6.4 123 43-182 243-398 (517)
173 KOG1551 Uncharacterized conser 97.7 0.00028 6.2E-09 54.6 8.4 58 170-242 309-366 (371)
174 PF05577 Peptidase_S28: Serine 97.7 0.00018 3.8E-09 61.6 8.2 110 44-157 29-148 (434)
175 PF07519 Tannase: Tannase and 97.7 0.0009 1.9E-08 57.7 12.4 65 169-241 355-426 (474)
176 PF05057 DUF676: Putative seri 97.7 0.00025 5.4E-09 54.8 7.6 19 124-142 78-96 (217)
177 PF05576 Peptidase_S37: PS-10 97.6 0.00071 1.5E-08 55.9 9.5 100 43-154 63-166 (448)
178 PF08386 Abhydrolase_4: TAP-li 97.5 0.00035 7.6E-09 47.1 6.2 60 166-240 33-92 (103)
179 COG4947 Uncharacterized protei 97.5 0.00066 1.4E-08 49.2 7.3 102 109-213 85-216 (227)
180 PF07082 DUF1350: Protein of u 97.5 0.0081 1.8E-07 46.6 13.8 161 32-214 8-206 (250)
181 KOG1516 Carboxylesterase and r 97.5 0.00024 5.2E-09 62.6 6.0 119 30-157 97-232 (545)
182 COG1075 LipA Predicted acetylt 97.4 0.00064 1.4E-08 56.0 7.4 97 43-156 59-163 (336)
183 KOG3724 Negative regulator of 97.4 0.001 2.3E-08 59.0 8.4 104 25-143 63-201 (973)
184 KOG2521 Uncharacterized conser 97.3 0.012 2.7E-07 48.2 13.7 179 42-244 37-292 (350)
185 smart00824 PKS_TE Thioesterase 97.3 0.0032 7E-08 47.6 9.5 83 56-155 11-100 (212)
186 KOG2183 Prolylcarboxypeptidase 97.2 0.0015 3.3E-08 53.9 7.4 98 43-144 80-187 (492)
187 KOG2541 Palmitoyl protein thio 97.1 0.0035 7.7E-08 48.8 8.3 98 44-156 24-127 (296)
188 PF04301 DUF452: Protein of un 97.1 0.0033 7.2E-08 47.9 7.8 36 122-157 55-90 (213)
189 cd00741 Lipase Lipase. Lipase 97.0 0.0026 5.7E-08 46.1 6.1 74 109-182 12-98 (153)
190 PF02450 LCAT: Lecithin:choles 96.9 0.0027 6E-08 53.5 6.8 81 59-157 66-160 (389)
191 PF02089 Palm_thioest: Palmito 96.8 0.0095 2.1E-07 47.3 8.0 104 42-156 4-115 (279)
192 PLN02606 palmitoyl-protein thi 96.8 0.024 5.1E-07 45.5 10.2 99 42-154 25-129 (306)
193 PF11187 DUF2974: Protein of u 96.7 0.0053 1.1E-07 47.5 6.4 48 110-157 67-123 (224)
194 PLN02633 palmitoyl protein thi 96.7 0.032 6.9E-07 44.9 10.4 100 42-156 24-130 (314)
195 PF11288 DUF3089: Protein of u 96.7 0.0044 9.6E-08 47.0 5.4 37 108-144 77-115 (207)
196 PTZ00472 serine carboxypeptida 96.7 0.021 4.5E-07 49.3 10.1 108 41-158 75-217 (462)
197 COG4287 PqaA PhoPQ-activated p 96.5 0.0029 6.3E-08 51.5 3.7 90 122-215 232-373 (507)
198 PF06259 Abhydrolase_8: Alpha/ 96.4 0.016 3.4E-07 43.0 6.9 73 109-181 92-171 (177)
199 PLN02517 phosphatidylcholine-s 96.3 0.017 3.8E-07 50.4 7.1 88 60-157 158-263 (642)
200 PF01764 Lipase_3: Lipase (cla 96.2 0.0098 2.1E-07 42.2 4.7 32 111-142 50-82 (140)
201 COG4553 DepA Poly-beta-hydroxy 96.0 0.38 8.3E-06 38.4 12.9 68 167-244 339-409 (415)
202 TIGR03712 acc_sec_asp2 accesso 95.9 0.26 5.6E-06 42.2 12.3 36 122-157 355-390 (511)
203 PF01083 Cutinase: Cutinase; 95.8 0.023 5.1E-07 42.4 5.3 73 109-181 65-149 (179)
204 KOG2182 Hydrolytic enzymes of 95.7 0.051 1.1E-06 46.3 7.4 112 42-157 84-207 (514)
205 cd00519 Lipase_3 Lipase (class 95.4 0.058 1.2E-06 41.9 6.4 33 110-142 113-146 (229)
206 COG5153 CVT17 Putative lipase 95.3 0.32 7E-06 38.6 10.1 50 108-157 259-309 (425)
207 KOG4540 Putative lipase essent 95.3 0.32 7E-06 38.6 10.1 50 108-157 259-309 (425)
208 PLN02847 triacylglycerol lipas 95.1 0.065 1.4E-06 46.9 6.2 69 121-191 248-327 (633)
209 KOG2565 Predicted hydrolases o 94.7 0.28 6.2E-06 40.5 8.6 105 26-144 130-249 (469)
210 PF06850 PHB_depo_C: PHB de-po 94.4 0.087 1.9E-06 39.4 4.6 86 148-242 117-202 (202)
211 KOG2369 Lecithin:cholesterol a 94.3 0.089 1.9E-06 44.6 5.0 70 59-143 125-201 (473)
212 PLN02454 triacylglycerol lipas 94.2 0.058 1.2E-06 45.3 3.8 34 109-142 210-246 (414)
213 PLN02310 triacylglycerol lipas 94.2 0.041 8.8E-07 46.1 2.8 60 124-183 209-280 (405)
214 KOG3967 Uncharacterized conser 94.1 0.35 7.5E-06 36.8 7.3 35 122-156 188-226 (297)
215 PLN03037 lipase class 3 family 94.0 0.041 8.8E-07 47.3 2.6 77 109-185 302-392 (525)
216 PF00450 Peptidase_S10: Serine 93.8 0.32 6.9E-06 41.3 7.6 104 41-157 38-181 (415)
217 PLN00413 triacylglycerol lipas 93.8 0.093 2E-06 44.8 4.2 40 119-158 279-328 (479)
218 KOG4372 Predicted alpha/beta h 93.3 0.28 6E-06 40.9 6.1 89 40-141 77-167 (405)
219 PLN02162 triacylglycerol lipas 93.2 0.12 2.7E-06 44.0 4.0 23 120-142 274-296 (475)
220 PLN02934 triacylglycerol lipas 92.9 0.15 3.3E-06 43.9 4.1 32 111-142 307-339 (515)
221 PLN02571 triacylglycerol lipas 92.7 0.14 3E-06 43.1 3.7 18 125-142 227-244 (413)
222 KOG4389 Acetylcholinesterase/B 92.7 0.12 2.7E-06 44.0 3.3 102 44-157 136-255 (601)
223 PLN02408 phospholipase A1 92.4 0.17 3.7E-06 42.0 3.8 56 125-180 201-267 (365)
224 PLN02324 triacylglycerol lipas 92.0 0.19 4.2E-06 42.3 3.7 19 124-142 215-233 (415)
225 PLN02719 triacylglycerol lipas 91.8 0.21 4.5E-06 43.1 3.7 19 124-142 298-316 (518)
226 COG2830 Uncharacterized protei 91.7 0.47 1E-05 34.4 4.8 33 125-157 58-90 (214)
227 PLN02802 triacylglycerol lipas 91.3 0.26 5.6E-06 42.5 3.8 19 124-142 330-348 (509)
228 PLN02753 triacylglycerol lipas 91.2 0.26 5.6E-06 42.7 3.7 19 124-142 312-330 (531)
229 PF03283 PAE: Pectinacetyleste 90.8 0.54 1.2E-05 39.3 5.1 34 109-142 138-174 (361)
230 PLN02761 lipase class 3 family 90.6 0.2 4.4E-06 43.2 2.5 19 124-142 294-312 (527)
231 KOG4569 Predicted lipase [Lipi 88.5 0.59 1.3E-05 38.7 3.7 33 110-142 156-189 (336)
232 COG3673 Uncharacterized conser 87.8 9.7 0.00021 31.2 9.8 35 108-142 104-140 (423)
233 PF08237 PE-PPE: PE-PPE domain 86.0 1.7 3.7E-05 33.7 4.8 21 122-142 46-66 (225)
234 PF10081 Abhydrolase_9: Alpha/ 85.3 18 0.00039 29.1 11.5 101 44-157 34-147 (289)
235 PF10605 3HBOH: 3HB-oligomer h 84.8 2.4 5.1E-05 37.6 5.4 75 167-241 555-636 (690)
236 COG4822 CbiK Cobalamin biosynt 84.7 9.2 0.0002 29.3 7.8 57 43-126 138-196 (265)
237 COG2939 Carboxypeptidase C (ca 84.0 5.4 0.00012 34.6 7.1 40 103-142 171-216 (498)
238 PLN03016 sinapoylglucose-malat 83.0 1.9 4.2E-05 37.0 4.3 35 123-157 164-210 (433)
239 PF05277 DUF726: Protein of un 82.8 4.9 0.00011 33.3 6.3 60 122-181 218-289 (345)
240 PF06441 EHN: Epoxide hydrolas 81.4 4.3 9.4E-05 27.7 4.7 35 24-58 72-107 (112)
241 KOG2029 Uncharacterized conser 79.3 5.8 0.00013 35.1 5.8 34 109-142 508-544 (697)
242 PF04083 Abhydro_lipase: Parti 78.9 4.5 9.8E-05 24.4 3.7 15 42-56 42-56 (63)
243 TIGR02690 resist_ArsH arsenica 76.5 8.9 0.00019 29.7 5.6 92 44-137 27-141 (219)
244 PF09994 DUF2235: Uncharacteri 76.4 4.5 9.7E-05 32.5 4.2 35 108-142 74-110 (277)
245 KOG1282 Serine carboxypeptidas 76.3 7.1 0.00015 33.7 5.5 65 168-242 364-448 (454)
246 PTZ00472 serine carboxypeptida 74.6 10 0.00022 33.0 6.2 65 167-241 364-458 (462)
247 TIGR02884 spore_pdaA delta-lac 74.2 4.7 0.0001 31.2 3.7 36 43-78 186-221 (224)
248 PF06309 Torsin: Torsin; Inte 70.1 0.91 2E-05 31.6 -1.0 43 27-71 38-81 (127)
249 PLN02209 serine carboxypeptida 70.0 23 0.00049 30.7 7.1 35 123-157 166-212 (437)
250 PLN02213 sinapoylglucose-malat 68.6 18 0.00039 29.7 6.1 64 167-241 233-316 (319)
251 KOG1202 Animal-type fatty acid 68.4 17 0.00037 35.5 6.3 47 111-157 2168-2219(2376)
252 COG2185 Sbm Methylmalonyl-CoA 67.7 42 0.00092 24.0 8.1 71 41-139 10-80 (143)
253 PLN02209 serine carboxypeptida 67.6 18 0.00038 31.3 6.0 64 167-241 351-434 (437)
254 COG0431 Predicted flavoprotein 67.5 17 0.00037 27.2 5.3 60 59-142 57-119 (184)
255 KOG3179 Predicted glutamine sy 67.5 26 0.00057 26.7 6.0 104 111-219 79-192 (245)
256 PLN03016 sinapoylglucose-malat 67.1 18 0.00038 31.3 5.9 64 167-241 347-430 (433)
257 PF09370 TIM-br_sig_trns: TIM- 66.0 7.4 0.00016 30.9 3.1 94 113-211 2-120 (268)
258 TIGR02764 spore_ybaN_pdaB poly 65.9 6.6 0.00014 29.4 2.8 35 44-78 152-188 (191)
259 PF12242 Eno-Rase_NADH_b: NAD( 65.0 16 0.00035 22.9 3.9 34 109-142 21-58 (78)
260 KOG1202 Animal-type fatty acid 64.6 60 0.0013 32.2 8.9 101 111-216 569-694 (2376)
261 PF00450 Peptidase_S10: Serine 64.3 10 0.00022 32.2 4.0 64 167-240 330-414 (415)
262 PF00698 Acyl_transf_1: Acyl t 63.7 6.8 0.00015 32.1 2.8 31 112-142 72-102 (318)
263 smart00827 PKS_AT Acyl transfe 63.3 9.6 0.00021 30.7 3.5 31 113-143 71-101 (298)
264 PF03853 YjeF_N: YjeF-related 61.3 28 0.0006 25.6 5.4 37 42-79 24-60 (169)
265 PF06500 DUF1100: Alpha/beta h 61.0 7.1 0.00015 33.2 2.4 67 166-241 188-254 (411)
266 COG1856 Uncharacterized homolo 60.7 79 0.0017 24.7 8.4 80 61-152 100-185 (275)
267 cd07198 Patatin Patatin-like p 60.4 12 0.00026 27.5 3.3 32 113-144 15-46 (172)
268 TIGR03131 malonate_mdcH malona 60.3 12 0.00025 30.3 3.5 30 113-142 65-94 (295)
269 KOG1283 Serine carboxypeptidas 59.9 60 0.0013 26.9 7.2 129 39-178 27-186 (414)
270 cd07207 Pat_ExoU_VipD_like Exo 59.7 13 0.00027 27.9 3.4 32 113-144 16-47 (194)
271 cd03413 CbiK_C Anaerobic cobal 59.1 51 0.0011 22.0 7.1 21 109-129 42-62 (103)
272 cd07211 Pat_PNPLA8 Patatin-lik 58.8 15 0.00033 29.9 3.9 17 127-143 44-60 (308)
273 PRK10279 hypothetical protein; 58.2 13 0.00029 30.3 3.5 31 113-143 22-52 (300)
274 cd07225 Pat_PNPLA6_PNPLA7 Pata 55.8 15 0.00033 30.0 3.5 32 113-144 32-63 (306)
275 cd07228 Pat_NTE_like_bacteria 55.6 23 0.0005 26.1 4.2 32 113-144 17-48 (175)
276 cd07210 Pat_hypo_W_succinogene 55.5 18 0.00039 28.0 3.7 31 113-143 17-47 (221)
277 cd07205 Pat_PNPLA6_PNPLA7_NTE1 54.8 21 0.00045 26.2 3.8 32 113-144 17-48 (175)
278 COG3494 Uncharacterized protei 53.8 47 0.001 26.3 5.5 59 61-130 18-76 (279)
279 cd07227 Pat_Fungal_NTE1 Fungal 52.8 19 0.00041 28.8 3.5 32 113-144 27-58 (269)
280 PHA02519 plasmid partition pro 52.7 21 0.00046 30.3 3.9 36 43-79 105-143 (387)
281 cd07209 Pat_hypo_Ecoli_Z1214_l 52.4 21 0.00046 27.4 3.6 33 113-145 15-47 (215)
282 TIGR00128 fabD malonyl CoA-acy 51.3 19 0.00041 28.8 3.4 30 113-142 71-101 (290)
283 TIGR02069 cyanophycinase cyano 51.0 99 0.0021 24.5 7.2 40 40-79 25-65 (250)
284 COG4425 Predicted membrane pro 50.2 35 0.00075 29.5 4.6 30 111-140 381-413 (588)
285 KOG2585 Uncharacterized conser 49.0 40 0.00086 28.9 4.8 40 39-79 262-301 (453)
286 COG3340 PepE Peptidase E [Amin 48.7 46 0.001 25.6 4.7 40 41-80 30-71 (224)
287 PRK06490 glutamine amidotransf 47.9 85 0.0019 24.6 6.4 18 125-142 86-103 (239)
288 PLN03050 pyridoxine (pyridoxam 47.7 42 0.00091 26.5 4.6 34 44-78 61-94 (246)
289 TIGR02873 spore_ylxY probable 47.6 26 0.00056 28.1 3.5 35 43-78 230-264 (268)
290 TIGR02195 heptsyl_trn_II lipop 46.9 1.1E+02 0.0024 25.1 7.3 21 57-77 193-213 (334)
291 KOG1282 Serine carboxypeptidas 46.4 31 0.00068 29.9 4.0 49 109-157 149-213 (454)
292 COG1752 RssA Predicted esteras 46.2 25 0.00054 28.6 3.3 31 113-143 28-58 (306)
293 COG0529 CysC Adenylylsulfate k 44.4 61 0.0013 24.3 4.7 39 41-79 20-59 (197)
294 PLN02213 sinapoylglucose-malat 43.3 37 0.0008 27.9 3.9 37 123-159 50-98 (319)
295 cd07224 Pat_like Patatin-like 43.2 31 0.00067 26.9 3.3 33 113-145 16-50 (233)
296 PRK13869 plasmid-partitioning 43.0 39 0.00084 28.9 4.1 35 45-80 122-159 (405)
297 cd03409 Chelatase_Class_II Cla 42.7 92 0.002 20.1 6.3 21 109-129 45-65 (101)
298 TIGR00632 vsr DNA mismatch end 41.5 43 0.00093 23.1 3.3 16 63-78 99-114 (117)
299 PLN02757 sirohydrochlorine fer 41.5 1.4E+02 0.0029 21.7 6.2 21 109-129 58-78 (154)
300 KOG0256 1-aminocyclopropane-1- 41.1 2.4E+02 0.0051 24.4 12.2 122 109-242 128-258 (471)
301 COG1058 CinA Predicted nucleot 41.0 1E+02 0.0022 24.5 5.8 47 58-129 21-67 (255)
302 PRK07877 hypothetical protein; 40.9 1.5E+02 0.0033 27.6 7.7 78 122-208 106-183 (722)
303 PRK13705 plasmid-partitioning 40.5 37 0.0008 28.9 3.6 37 42-79 104-143 (388)
304 cd07213 Pat17_PNPLA8_PNPLA9_li 40.5 54 0.0012 26.4 4.4 18 127-144 37-54 (288)
305 COG1255 Uncharacterized protei 39.7 34 0.00075 23.5 2.6 22 59-80 24-45 (129)
306 COG0505 CarA Carbamoylphosphat 39.3 1.6E+02 0.0035 24.7 6.8 73 61-142 191-267 (368)
307 COG0400 Predicted esterase [Ge 38.9 1.4E+02 0.0031 22.8 6.2 40 41-80 144-185 (207)
308 COG0331 FabD (acyl-carrier-pro 38.6 35 0.00076 28.0 3.0 31 113-143 72-104 (310)
309 PRK10916 ADP-heptose:LPS hepto 38.4 2.3E+02 0.0049 23.4 8.2 21 57-77 199-219 (348)
310 PF09314 DUF1972: Domain of un 38.3 1.1E+02 0.0024 23.0 5.4 103 54-156 17-128 (185)
311 COG3233 Predicted deacetylase 38.1 1.9E+02 0.0041 22.5 6.5 39 44-83 4-47 (233)
312 PRK05282 (alpha)-aspartyl dipe 37.9 2E+02 0.0043 22.6 8.1 39 42-80 30-70 (233)
313 cd01819 Patatin_and_cPLA2 Pata 37.8 43 0.00094 24.1 3.2 30 113-142 15-46 (155)
314 cd07208 Pat_hypo_Ecoli_yjju_li 37.6 40 0.00087 26.7 3.3 31 113-143 15-46 (266)
315 cd03818 GT1_ExpC_like This fam 37.4 55 0.0012 27.5 4.2 32 46-80 2-33 (396)
316 cd07222 Pat_PNPLA4 Patatin-lik 37.2 41 0.00089 26.5 3.2 32 113-144 16-51 (246)
317 KOG2385 Uncharacterized conser 37.0 67 0.0015 28.4 4.5 37 121-157 444-487 (633)
318 PF01583 APS_kinase: Adenylyls 35.6 87 0.0019 22.8 4.4 38 43-80 1-39 (156)
319 PHA02518 ParA-like protein; Pr 35.4 59 0.0013 24.4 3.8 29 51-80 10-38 (211)
320 cd07212 Pat_PNPLA9 Patatin-lik 35.4 49 0.0011 27.1 3.5 18 127-144 35-52 (312)
321 PF11394 DUF2875: Protein of u 35.3 80 0.0017 27.0 4.5 67 163-243 75-141 (451)
322 cd07230 Pat_TGL4-5_like Triacy 35.1 45 0.00097 28.7 3.3 31 113-143 90-120 (421)
323 KOG1209 1-Acyl dihydroxyaceton 34.8 74 0.0016 24.7 4.0 36 43-80 6-41 (289)
324 TIGR03453 partition_RepA plasm 34.7 60 0.0013 27.5 4.0 37 43-80 103-142 (387)
325 cd07204 Pat_PNPLA_like Patatin 34.6 54 0.0012 25.7 3.5 32 113-144 16-51 (243)
326 PF01656 CbiA: CobQ/CobB/MinD/ 34.4 67 0.0015 23.6 3.9 21 59-79 15-35 (195)
327 cd04950 GT1_like_1 Glycosyltra 34.1 92 0.002 26.0 5.0 37 44-80 5-42 (373)
328 TIGR01303 IMP_DH_rel_1 IMP deh 34.1 2.4E+02 0.0052 24.9 7.5 61 58-142 224-284 (475)
329 COG0518 GuaA GMP synthase - Gl 33.6 2.1E+02 0.0046 21.7 6.8 32 111-142 65-96 (198)
330 COG0062 Uncharacterized conser 33.4 92 0.002 23.8 4.4 36 43-79 49-84 (203)
331 PF06180 CbiK: Cobalt chelatas 33.4 1.4E+02 0.0031 23.9 5.6 61 42-128 140-202 (262)
332 PF05577 Peptidase_S28: Serine 33.1 76 0.0017 27.3 4.4 42 168-217 377-418 (434)
333 cd05312 NAD_bind_1_malic_enz N 33.0 1.6E+02 0.0034 23.9 5.8 74 61-141 42-123 (279)
334 KOG4231 Intracellular membrane 32.6 54 0.0012 28.9 3.2 52 68-143 413-469 (763)
335 COG3946 VirJ Type IV secretory 32.6 2.9E+02 0.0064 23.8 7.4 104 41-156 46-156 (456)
336 COG0859 RfaF ADP-heptose:LPS h 32.6 82 0.0018 26.0 4.4 37 43-79 175-216 (334)
337 PHA01735 hypothetical protein 32.3 40 0.00086 20.6 1.8 28 103-130 27-54 (76)
338 cd07232 Pat_PLPL Patain-like p 32.3 54 0.0012 28.1 3.3 31 113-143 84-114 (407)
339 PF09989 DUF2229: CoA enzyme a 32.2 57 0.0012 25.3 3.2 37 43-79 183-220 (221)
340 PRK07053 glutamine amidotransf 32.0 2.1E+02 0.0046 22.3 6.3 32 111-142 69-100 (234)
341 PF14606 Lipase_GDSL_3: GDSL-l 31.9 1.6E+02 0.0035 22.0 5.4 53 59-130 47-100 (178)
342 cd08194 Fe-ADH6 Iron-containin 31.7 2.7E+02 0.0058 23.5 7.3 64 45-130 25-88 (375)
343 PRK13230 nitrogenase reductase 31.6 39 0.00085 27.0 2.3 22 59-80 17-38 (279)
344 COG1564 THI80 Thiamine pyropho 31.4 1.2E+02 0.0026 23.4 4.7 33 105-138 74-106 (212)
345 cd07229 Pat_TGL3_like Triacylg 30.6 64 0.0014 27.5 3.4 32 113-144 100-131 (391)
346 KOG0780 Signal recognition par 30.5 3.6E+02 0.0077 23.3 7.7 90 65-175 177-275 (483)
347 cd07220 Pat_PNPLA2 Patatin-lik 30.5 65 0.0014 25.5 3.3 32 113-144 21-56 (249)
348 cd02037 MRP-like MRP (Multiple 30.1 58 0.0013 23.6 2.8 28 51-79 9-36 (169)
349 PF08484 Methyltransf_14: C-me 30.0 93 0.002 22.7 3.8 46 109-155 55-102 (160)
350 PF14253 AbiH: Bacteriophage a 29.7 34 0.00074 27.1 1.7 15 122-136 233-247 (270)
351 TIGR01281 DPOR_bchL light-inde 29.7 44 0.00096 26.4 2.3 21 60-80 17-37 (268)
352 PRK03094 hypothetical protein; 29.6 67 0.0015 20.4 2.6 22 58-79 8-29 (80)
353 cd07231 Pat_SDP1-like Sugar-De 29.5 68 0.0015 26.5 3.3 31 113-143 85-115 (323)
354 PF13207 AAA_17: AAA domain; P 29.4 86 0.0019 21.0 3.5 31 46-79 1-32 (121)
355 PF08250 Sperm_act_pep: Sperm- 29.2 14 0.00031 13.4 -0.3 6 130-135 1-6 (10)
356 COG0084 TatD Mg-dependent DNas 28.8 1.7E+02 0.0038 23.3 5.4 51 107-157 15-67 (256)
357 TIGR01287 nifH nitrogenase iro 28.8 49 0.0011 26.3 2.4 21 60-80 17-37 (275)
358 cd03129 GAT1_Peptidase_E_like 28.6 2.6E+02 0.0057 21.2 7.2 38 42-79 28-65 (210)
359 PRK13185 chlL protochlorophyll 28.6 48 0.001 26.3 2.3 29 51-80 11-39 (270)
360 COG1448 TyrB Aspartate/tyrosin 28.6 2.8E+02 0.0061 23.6 6.6 99 130-242 98-204 (396)
361 PLN02840 tRNA dimethylallyltra 28.4 3.9E+02 0.0084 23.2 7.7 86 42-130 19-118 (421)
362 PF01734 Patatin: Patatin-like 28.3 62 0.0013 23.5 2.8 31 114-144 16-47 (204)
363 cd08189 Fe-ADH5 Iron-containin 28.3 3.2E+02 0.0069 23.0 7.3 64 45-130 28-91 (374)
364 cd03416 CbiX_SirB_N Sirohydroc 28.3 1.7E+02 0.0037 19.0 5.8 12 59-70 17-28 (101)
365 cd07206 Pat_TGL3-4-5_SDP1 Tria 28.1 74 0.0016 26.0 3.3 31 113-143 86-116 (298)
366 cd08551 Fe-ADH iron-containing 28.0 3.3E+02 0.0072 22.8 7.3 64 45-130 25-88 (370)
367 TIGR03371 cellulose_yhjQ cellu 27.9 75 0.0016 24.6 3.3 29 51-80 11-39 (246)
368 cd02032 Bchl_like This family 27.8 49 0.0011 26.2 2.2 21 60-80 17-37 (267)
369 PF13200 DUF4015: Putative gly 27.7 2.1E+02 0.0045 23.7 5.7 71 47-122 2-74 (316)
370 PF03033 Glyco_transf_28: Glyc 27.6 47 0.001 23.0 1.9 32 47-78 2-33 (139)
371 PRK09072 short chain dehydroge 27.5 1.1E+02 0.0024 23.9 4.2 31 46-79 7-37 (263)
372 cd03146 GAT1_Peptidase_E Type 27.5 2.8E+02 0.0061 21.1 7.2 39 41-79 29-68 (212)
373 KOG1610 Corticosteroid 11-beta 27.5 1E+02 0.0022 25.4 3.8 33 44-79 29-61 (322)
374 PRK13235 nifH nitrogenase redu 27.4 46 0.001 26.5 2.0 21 60-80 18-38 (274)
375 PRK13849 putative crown gall t 27.3 83 0.0018 24.5 3.4 28 51-79 11-38 (231)
376 PRK10037 cell division protein 27.2 51 0.0011 25.9 2.2 29 51-80 11-39 (250)
377 cd02040 NifH NifH gene encodes 27.1 54 0.0012 25.9 2.4 29 51-80 10-38 (270)
378 CHL00072 chlL photochlorophyll 27.0 57 0.0012 26.4 2.5 29 51-80 9-37 (290)
379 KOG2170 ATPase of the AAA+ sup 27.0 55 0.0012 26.8 2.3 51 28-80 96-147 (344)
380 PTZ00445 p36-lilke protein; Pr 26.8 3E+02 0.0066 21.3 6.7 91 59-159 30-145 (219)
381 cd07218 Pat_iPLA2 Calcium-inde 26.7 75 0.0016 25.0 3.1 31 113-143 17-49 (245)
382 TIGR03709 PPK2_rel_1 polyphosp 26.5 86 0.0019 25.1 3.3 39 42-80 54-93 (264)
383 KOG2182 Hydrolytic enzymes of 26.5 2.4E+02 0.0053 24.9 6.1 67 167-241 433-501 (514)
384 PF03698 UPF0180: Uncharacteri 26.0 81 0.0018 20.1 2.5 21 59-79 9-29 (80)
385 PF07015 VirC1: VirC1 protein; 25.9 1E+02 0.0022 24.1 3.6 34 45-79 3-38 (231)
386 cd01983 Fer4_NifH The Fer4_Nif 25.8 1.1E+02 0.0023 19.1 3.3 20 59-78 15-34 (99)
387 PLN02748 tRNA dimethylallyltra 25.6 4.2E+02 0.0092 23.3 7.5 87 41-130 19-119 (468)
388 KOG2941 Beta-1,4-mannosyltrans 25.5 1.6E+02 0.0036 24.8 4.7 40 40-80 10-49 (444)
389 cd07221 Pat_PNPLA3 Patatin-lik 25.5 84 0.0018 24.9 3.1 31 113-143 17-51 (252)
390 PLN02572 UDP-sulfoquinovose sy 25.5 1.1E+02 0.0024 26.4 4.1 31 46-79 49-79 (442)
391 PRK08177 short chain dehydroge 25.4 1E+02 0.0023 23.3 3.7 32 46-80 3-34 (225)
392 COG2312 Erythromycin esterase 25.2 1.6E+02 0.0036 25.1 4.8 24 109-132 118-146 (405)
393 PRK05368 homoserine O-succinyl 25.2 76 0.0016 26.0 2.8 30 110-142 123-152 (302)
394 cd08178 AAD_C C-terminal alcoh 25.2 3.1E+02 0.0068 23.3 6.7 64 45-130 23-86 (398)
395 cd08192 Fe-ADH7 Iron-containin 25.0 4.1E+02 0.0089 22.3 7.4 64 45-130 26-89 (370)
396 PLN00414 glycosyltransferase f 25.0 1.2E+02 0.0026 26.3 4.2 38 42-80 3-41 (446)
397 COG3727 Vsr DNA G:T-mismatch r 25.0 1.9E+02 0.0042 20.4 4.3 18 62-79 99-116 (150)
398 cd03785 GT1_MurG MurG is an N- 24.7 1E+02 0.0022 25.2 3.7 34 46-79 2-35 (350)
399 PLN03049 pyridoxine (pyridoxam 24.5 1.1E+02 0.0023 26.9 3.8 34 45-79 61-94 (462)
400 PRK12828 short chain dehydroge 24.2 1.2E+02 0.0026 23.0 3.8 31 46-79 9-39 (239)
401 TIGR01007 eps_fam capsular exo 24.2 1.9E+02 0.004 21.7 4.8 21 60-80 35-55 (204)
402 PRK08703 short chain dehydroge 24.1 1.5E+02 0.0032 22.7 4.3 31 46-79 8-38 (239)
403 cd03414 CbiX_SirB_C Sirohydroc 24.0 2.3E+02 0.005 18.9 6.6 22 109-130 45-66 (117)
404 PRK10964 ADP-heptose:LPS hepto 24.0 1.5E+02 0.0032 24.2 4.5 33 44-76 179-215 (322)
405 PRK11460 putative hydrolase; P 24.0 3.3E+02 0.0071 21.0 6.2 39 42-80 147-187 (232)
406 PRK15454 ethanol dehydrogenase 23.9 4.5E+02 0.0098 22.4 7.4 51 58-130 64-114 (395)
407 PRK13255 thiopurine S-methyltr 23.9 1.2E+02 0.0026 23.3 3.7 16 64-79 52-67 (218)
408 PF08643 DUF1776: Fungal famil 23.6 1.3E+02 0.0029 24.6 3.9 32 46-79 5-36 (299)
409 cd08185 Fe-ADH1 Iron-containin 23.5 4.5E+02 0.0098 22.2 7.4 64 45-130 27-91 (380)
410 PRK13232 nifH nitrogenase redu 23.2 59 0.0013 25.9 1.9 29 51-80 10-38 (273)
411 PRK07523 gluconate 5-dehydroge 23.2 1.5E+02 0.0032 23.0 4.2 31 46-79 12-42 (255)
412 KOG3079 Uridylate kinase/adeny 23.0 1.7E+02 0.0036 22.2 4.0 36 40-78 4-40 (195)
413 PLN02918 pyridoxine (pyridoxam 22.9 1.2E+02 0.0026 27.1 3.8 33 45-78 137-169 (544)
414 PF01075 Glyco_transf_9: Glyco 22.9 1.1E+02 0.0025 23.6 3.5 37 43-79 105-145 (247)
415 cd02036 MinD Bacterial cell di 22.8 1.1E+02 0.0024 22.0 3.3 28 51-79 9-36 (179)
416 cd03805 GT1_ALG2_like This fam 22.7 1.1E+02 0.0025 25.3 3.7 34 46-79 3-38 (392)
417 PRK00923 sirohydrochlorin coba 22.7 2.6E+02 0.0056 19.1 6.8 22 109-130 46-67 (126)
418 TIGR03840 TMPT_Se_Te thiopurin 22.7 73 0.0016 24.5 2.3 16 64-79 49-64 (213)
419 PF01872 RibD_C: RibD C-termin 22.7 3.1E+02 0.0066 20.5 5.7 34 109-145 121-154 (200)
420 PF13439 Glyco_transf_4: Glyco 22.5 87 0.0019 22.1 2.6 27 54-80 12-38 (177)
421 COG3007 Uncharacterized paraqu 22.5 1.4E+02 0.003 24.5 3.7 34 109-142 22-60 (398)
422 COG1087 GalE UDP-glucose 4-epi 22.4 4.5E+02 0.0098 21.8 6.9 96 47-154 3-117 (329)
423 PRK13256 thiopurine S-methyltr 22.4 70 0.0015 24.9 2.1 16 64-79 58-73 (226)
424 PLN02653 GDP-mannose 4,6-dehyd 22.4 1.9E+02 0.004 23.7 4.8 32 46-80 8-39 (340)
425 PF04244 DPRP: Deoxyribodipyri 22.3 3.1E+02 0.0067 21.3 5.6 21 59-79 50-70 (224)
426 PRK06194 hypothetical protein; 22.2 1.2E+02 0.0025 24.1 3.4 31 46-79 8-38 (287)
427 TIGR01305 GMP_reduct_1 guanosi 22.2 3.2E+02 0.0069 22.9 5.8 47 61-131 109-157 (343)
428 PF06792 UPF0261: Uncharacteri 22.1 5.1E+02 0.011 22.3 11.9 132 46-180 4-152 (403)
429 PLN02173 UDP-glucosyl transfer 22.1 1.6E+02 0.0035 25.6 4.4 38 42-80 4-42 (449)
430 cd02117 NifH_like This family 22.1 74 0.0016 24.2 2.2 21 60-80 17-37 (212)
431 PRK10673 acyl-CoA esterase; Pr 22.1 3.6E+02 0.0078 20.5 7.2 63 166-241 15-77 (255)
432 PRK13236 nitrogenase reductase 21.9 76 0.0016 25.7 2.3 21 60-80 23-43 (296)
433 TIGR02964 xanthine_xdhC xanthi 21.9 2E+02 0.0043 22.7 4.6 34 42-80 99-132 (246)
434 PRK00726 murG undecaprenyldiph 21.8 1.2E+02 0.0026 25.0 3.6 34 46-79 4-37 (357)
435 PLN02863 UDP-glucoronosyl/UDP- 21.6 1.9E+02 0.0041 25.4 4.8 38 42-80 8-46 (477)
436 TIGR01968 minD_bact septum sit 21.6 1.3E+02 0.0028 23.4 3.6 21 60-80 19-39 (261)
437 TIGR03566 FMN_reduc_MsuE FMN r 21.6 2.4E+02 0.0052 20.6 4.8 23 58-80 57-80 (174)
438 PLN02752 [acyl-carrier protein 21.6 1.1E+02 0.0024 25.4 3.2 17 127-143 127-143 (343)
439 cd08193 HVD 5-hydroxyvalerate 21.5 4.9E+02 0.011 21.9 7.2 64 45-130 28-91 (376)
440 PF10686 DUF2493: Protein of u 21.3 1.5E+02 0.0033 18.2 3.1 33 43-78 31-64 (71)
441 cd07219 Pat_PNPLA1 Patatin-lik 21.3 1.1E+02 0.0025 25.9 3.2 32 113-144 29-64 (382)
442 PRK06924 short chain dehydroge 21.2 1.7E+02 0.0036 22.5 4.1 31 46-79 3-33 (251)
443 PF09587 PGA_cap: Bacterial ca 21.1 2.5E+02 0.0053 22.0 5.0 38 43-80 185-225 (250)
444 cd08190 HOT Hydroxyacid-oxoaci 21.0 4.9E+02 0.011 22.3 7.1 64 45-130 25-88 (414)
445 TIGR02816 pfaB_fam PfaB family 21.0 1.2E+02 0.0025 27.2 3.3 23 120-142 261-283 (538)
446 PF14714 KH_dom-like: KH-domai 20.9 2.3E+02 0.005 17.8 4.8 30 165-194 36-65 (80)
447 PF03205 MobB: Molybdopterin g 20.8 2.7E+02 0.0058 19.6 4.7 41 45-85 1-43 (140)
448 TIGR02638 lactal_redase lactal 20.7 5.2E+02 0.011 21.8 7.2 64 45-130 31-94 (379)
449 cd01523 RHOD_Lact_B Member of 20.6 2.5E+02 0.0053 18.0 4.3 14 61-74 75-88 (100)
450 PF00289 CPSase_L_chain: Carba 20.5 93 0.002 21.0 2.2 32 45-77 74-105 (110)
451 PRK13656 trans-2-enoyl-CoA red 20.4 4.6E+02 0.01 22.5 6.6 75 58-142 199-279 (398)
452 PF04263 TPK_catalytic: Thiami 20.3 1.5E+02 0.0033 20.5 3.3 32 105-137 67-98 (123)
453 COG1506 DAP2 Dipeptidyl aminop 20.3 3.1E+02 0.0067 25.0 6.1 40 41-80 549-590 (620)
454 COG0552 FtsY Signal recognitio 20.2 2.3E+02 0.0049 23.7 4.6 37 42-78 137-174 (340)
455 TIGR03707 PPK2_P_aer polyphosp 20.1 1.4E+02 0.0029 23.4 3.3 38 43-80 30-68 (230)
456 COG1448 TyrB Aspartate/tyrosin 20.1 1.7E+02 0.0037 24.8 3.9 41 42-83 170-217 (396)
457 PRK08945 putative oxoacyl-(acy 20.1 2E+02 0.0043 22.1 4.3 33 44-79 12-44 (247)
458 cd03131 GATase1_HTS Type 1 glu 20.0 40 0.00086 25.1 0.3 31 109-142 85-115 (175)
No 1
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=100.00 E-value=9.4e-34 Score=208.52 Aligned_cols=235 Identities=35% Similarity=0.631 Sum_probs=210.0
Q ss_pred ccccCCCCCCCCCCCCCceEEeecCceEEEeecCCCCCCeEEEEEcCccCCCcchHHHHHHHHHhcCcEEEEeccCCCCC
Q 025842 5 QCFENPPKLSPGSGCGAGTVQQLGGLNTYVTGSGPPDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYGDP 84 (247)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~~~g~~ 84 (247)
.|...++--.+. ...|+.+.++|+.+|+. .....+..||++...+|.+.++.+..|+.+|..||.|++||++.|.+
T Consensus 5 ~cc~~~~~~~~~--~~~g~~~~v~gldaYv~--gs~~~~~~li~i~DvfG~~~~n~r~~Adk~A~~Gy~v~vPD~~~Gdp 80 (242)
T KOG3043|consen 5 PCCPDGKIAAEV--DDGGREEEVGGLDAYVV--GSTSSKKVLIVIQDVFGFQFPNTREGADKVALNGYTVLVPDFFRGDP 80 (242)
T ss_pred CCCCCccccccc--CCCCceEeecCeeEEEe--cCCCCCeEEEEEEeeeccccHHHHHHHHHHhcCCcEEEcchhhcCCC
Confidence 455555555666 56799999999999999 55555568888889999988889999999999999999999999999
Q ss_pred ccCCCCcccchHHHHhhcCCccccchHHHHHHHHHhcC-CCeEEEEEecccHHHHHHhhcCC-CccEEEEecCCCCCccc
Q 025842 85 IVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSKG-VSAIGAAGFCWGGVVAAKLASSH-DIQAAVVLHPGAITVDD 162 (247)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~-~~~i~l~G~S~Gg~~a~~~a~~~-~i~~~v~~~~~~~~~~~ 162 (247)
+ ++++.......|++..+.+....++.+++++|+.++ ..+|+++|+||||-.+..+.... .+.++++++|++....+
T Consensus 81 ~-~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk~~g~~kkIGv~GfCwGak~vv~~~~~~~~f~a~v~~hps~~d~~D 159 (242)
T KOG3043|consen 81 W-SPSLQKSERPEWMKGHSPPKIWKDITAVVKWLKNHGDSKKIGVVGFCWGAKVVVTLSAKDPEFDAGVSFHPSFVDSAD 159 (242)
T ss_pred C-CCCCChhhhHHHHhcCCcccchhHHHHHHHHHHHcCCcceeeEEEEeecceEEEEeeccchhheeeeEecCCcCChhH
Confidence 8 888888899999999999999999999999999886 78999999999999998877555 99999999999999999
Q ss_pred cccccccEEEeecCCCCCCCHHHHHHHHHHHHhccCCCeeEEEeCCCCccccc-cCCCCChHHHHHHHHHHHHHHHHHHH
Q 025842 163 INEIKVPVAILGAEIDHVSPPEDLKRFGEILSAKLKNDCLVKIYPRVSHGWTV-RYNVEDEFAVKSAEEAHEDMINWLTK 241 (247)
Q Consensus 163 ~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~H~~~~-~~~~~~~~~~~~~~~~~~~~~~fl~~ 241 (247)
...+++|++++.++.|.++|......+.+.+...+....++.+|+|.+|+|.. +....+|++....+++++.+++||++
T Consensus 160 ~~~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f~g~~HGf~~~r~~~~~Ped~~~~eea~~~~~~Wf~~ 239 (242)
T KOG3043|consen 160 IANVKAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKTFSGVGHGFVARRANISSPEDKKAAEEAYQRFISWFKH 239 (242)
T ss_pred HhcCCCCEEEEeecccccCCHHHHHHHHHHHhcCcccceeEEEcCCccchhhhhccCCCChhHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999996666556689999999999987 67778999999999999999999998
Q ss_pred Hhc
Q 025842 242 YVK 244 (247)
Q Consensus 242 ~~~ 244 (247)
++.
T Consensus 240 y~~ 242 (242)
T KOG3043|consen 240 YLA 242 (242)
T ss_pred hhC
Confidence 863
No 2
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=100.00 E-value=4.6e-32 Score=209.79 Aligned_cols=209 Identities=30% Similarity=0.545 Sum_probs=157.1
Q ss_pred ceEEEeecCCCCCCeEEEEEcCccCCCcchHHHHHHHHHhcCcEEEEeccCCCCCccCCCCcccchHHHHh--hcCCccc
Q 025842 30 LNTYVTGSGPPDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRK--IHNTDKG 107 (247)
Q Consensus 30 ~~~~~~~p~~~~~~~~vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~ 107 (247)
+++|+..|...++.|.||++|+.+|.+ ...+.+++.|+++||.|++||+++|... .+.........+.. ....+..
T Consensus 1 ~~ay~~~P~~~~~~~~Vvv~~d~~G~~-~~~~~~ad~lA~~Gy~v~~pD~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 78 (218)
T PF01738_consen 1 IDAYVARPEGGGPRPAVVVIHDIFGLN-PNIRDLADRLAEEGYVVLAPDLFGGRGA-PPSDPEEAFAAMRELFAPRPEQV 78 (218)
T ss_dssp EEEEEEEETTSSSEEEEEEE-BTTBS--HHHHHHHHHHHHTT-EEEEE-CCCCTS---CCCHHCHHHHHHHCHHHSHHHH
T ss_pred CeEEEEeCCCCCCCCEEEEEcCCCCCc-hHHHHHHHHHHhcCCCEEecccccCCCC-CccchhhHHHHHHHHHhhhHHHH
Confidence 478999887766789999999999987 6788999999999999999999866552 13333322222211 1113566
Q ss_pred cchHHHHHHHHHhcC---CCeEEEEEecccHHHHHHhhcCC-CccEEEEecCC-C--CCccccccccccEEEeecCCCCC
Q 025842 108 YVDAKSVIAALKSKG---VSAIGAAGFCWGGVVAAKLASSH-DIQAAVVLHPG-A--ITVDDINEIKVPVAILGAEIDHV 180 (247)
Q Consensus 108 ~~d~~~~i~~l~~~~---~~~i~l~G~S~Gg~~a~~~a~~~-~i~~~v~~~~~-~--~~~~~~~~~~~P~l~i~g~~D~~ 180 (247)
..|+.+++++++++. .++|+++|+|+||.+++.++... .+++++.++|. . ........+++|+++++|++|+.
T Consensus 79 ~~~~~aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~~~~~a~v~~yg~~~~~~~~~~~~~~~~P~l~~~g~~D~~ 158 (218)
T PF01738_consen 79 AADLQAAVDYLRAQPEVDPGKIGVVGFCWGGKLALLLAARDPRVDAAVSFYGGSPPPPPLEDAPKIKAPVLILFGENDPF 158 (218)
T ss_dssp HHHHHHHHHHHHCTTTCEEEEEEEEEETHHHHHHHHHHCCTTTSSEEEEES-SSSGGGHHHHGGG--S-EEEEEETT-TT
T ss_pred HHHHHHHHHHHHhccccCCCcEEEEEEecchHHhhhhhhhccccceEEEEcCCCCCCcchhhhcccCCCEeecCccCCCC
Confidence 688999999999885 57999999999999999999777 89999999992 2 22345778899999999999999
Q ss_pred CCHHHHHHHHHHHHhccCCCeeEEEeCCCCccccccCCCCChHHHHHHHHHHHHHHHHHHHHh
Q 025842 181 SPPEDLKRFGEILSAKLKNDCLVKIYPRVSHGWTVRYNVEDEFAVKSAEEAHEDMINWLTKYV 243 (247)
Q Consensus 181 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~ 243 (247)
++.+..+.+.+.+ ++.+++.++++|+|++|+|...... +.++.+.+++|+++++||+++|
T Consensus 159 ~~~~~~~~~~~~l-~~~~~~~~~~~y~ga~HgF~~~~~~--~~~~~aa~~a~~~~~~ff~~~L 218 (218)
T PF01738_consen 159 FPPEEVEALEEAL-KAAGVDVEVHVYPGAGHGFANPSRP--PYDPAAAEDAWQRTLAFFKRHL 218 (218)
T ss_dssp S-HHHHHHHHHHH-HCTTTTEEEEEETT--TTTTSTTST--T--HHHHHHHHHHHHHHHCC--
T ss_pred CChHHHHHHHHHH-HhcCCcEEEEECCCCcccccCCCCc--ccCHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999 6678899999999999999887665 5666899999999999999876
No 3
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.96 E-value=6.1e-28 Score=187.28 Aligned_cols=214 Identities=26% Similarity=0.476 Sum_probs=170.8
Q ss_pred cCceEEEeecCCCCCCeEEEEEcCccCCCcchHHHHHHHHHhcCcEEEEeccCC--CCCccCCCCcccchHH-HHhhcCC
Q 025842 28 GGLNTYVTGSGPPDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFY--GDPIVDLNNPQFDREA-WRKIHNT 104 (247)
Q Consensus 28 ~~~~~~~~~p~~~~~~~~vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~~~--g~~~~~~~~~~~~~~~-~~~~~~~ 104 (247)
..+.+|+..|...++.|.||++|+.+|.+ ..++.++++||.+||.|++||++. +.+. ........... .......
T Consensus 12 ~~~~~~~a~P~~~~~~P~VIv~hei~Gl~-~~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 89 (236)
T COG0412 12 GELPAYLARPAGAGGFPGVIVLHEIFGLN-PHIRDVARRLAKAGYVVLAPDLYGRQGDPT-DIEDEPAELETGLVERVDP 89 (236)
T ss_pred ceEeEEEecCCcCCCCCEEEEEecccCCc-hHHHHHHHHHHhCCcEEEechhhccCCCCC-cccccHHHHhhhhhccCCH
Confidence 45889999887777779999999999986 588999999999999999999972 3332 11111111111 1122333
Q ss_pred ccccchHHHHHHHHHhcC---CCeEEEEEecccHHHHHHhhcCC-CccEEEEecCCCCCc--cccccccccEEEeecCCC
Q 025842 105 DKGYVDAKSVIAALKSKG---VSAIGAAGFCWGGVVAAKLASSH-DIQAAVVLHPGAITV--DDINEIKVPVAILGAEID 178 (247)
Q Consensus 105 ~~~~~d~~~~i~~l~~~~---~~~i~l~G~S~Gg~~a~~~a~~~-~i~~~v~~~~~~~~~--~~~~~~~~P~l~i~g~~D 178 (247)
.....|+.+++++|..+. ..+|+++|+|+||.+++.++... ++++.++++|..... ....++++|+|+.+++.|
T Consensus 90 ~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~~v~a~v~fyg~~~~~~~~~~~~~~~pvl~~~~~~D 169 (236)
T COG0412 90 AEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAPEVKAAVAFYGGLIADDTADAPKIKVPVLLHLAGED 169 (236)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccCCccEEEEecCCCCCCcccccccccCcEEEEecccC
Confidence 677789999999999875 67999999999999999999777 899999999999743 445689999999999999
Q ss_pred CCCCHHHHHHHHHHHHhccCCCeeEEEeCCCCccccccC-CCCChHHHHHHHHHHHHHHHHHHHHhc
Q 025842 179 HVSPPEDLKRFGEILSAKLKNDCLVKIYPRVSHGWTVRY-NVEDEFAVKSAEEAHEDMINWLTKYVK 244 (247)
Q Consensus 179 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~H~~~~~~-~~~~~~~~~~~~~~~~~~~~fl~~~~~ 244 (247)
+.+|.+..+.+.+.+ .+.++.+++.+|+++.|+|.... ......+....+.+|+++++||++++.
T Consensus 170 ~~~p~~~~~~~~~~~-~~~~~~~~~~~y~ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~~~~ 235 (236)
T COG0412 170 PYIPAADVDALAAAL-EDAGVKVDLEIYPGAGHGFANDRADYHPGYDAAAAEDAWQRVLAFFKRLLG 235 (236)
T ss_pred CCCChhHHHHHHHHH-HhcCCCeeEEEeCCCccccccCCCcccccCCHHHHHHHHHHHHHHHHHhcc
Confidence 999999999999999 55666889999999999998763 112234457899999999999999875
No 4
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.94 E-value=1.5e-25 Score=165.08 Aligned_cols=176 Identities=23% Similarity=0.306 Sum_probs=148.4
Q ss_pred CCCeEEEEEcCccCCCcchHHHHHHHHHhcCcEEEEeccC-CCCCccCCCCcccchHHHHhhcCCccccchHHHHHHHHH
Q 025842 41 DSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALK 119 (247)
Q Consensus 41 ~~~~~vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~ 119 (247)
+...+||++||..| +....+.+++.|.++||.|.+|.|+ ||... ..-.......|+ +|+.+..++|.
T Consensus 13 ~G~~AVLllHGFTG-t~~Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~--e~fl~t~~~DW~---------~~v~d~Y~~L~ 80 (243)
T COG1647 13 GGNRAVLLLHGFTG-TPRDVRMLGRYLNENGYTVYAPRYPGHGTLP--EDFLKTTPRDWW---------EDVEDGYRDLK 80 (243)
T ss_pred cCCEEEEEEeccCC-CcHHHHHHHHHHHHCCceEecCCCCCCCCCH--HHHhcCCHHHHH---------HHHHHHHHHHH
Confidence 34588999995555 5678999999999999999999998 77753 233344455666 88999999999
Q ss_pred hcCCCeEEEEEecccHHHHHHhhcCCCccEEEEecCCCC-----------------------------------------
Q 025842 120 SKGVSAIGAAGFCWGGVVAAKLASSHDIQAAVVLHPGAI----------------------------------------- 158 (247)
Q Consensus 120 ~~~~~~i~l~G~S~Gg~~a~~~a~~~~i~~~v~~~~~~~----------------------------------------- 158 (247)
+.+.+.|+++|.||||.+++.+|....++++|.+++...
T Consensus 81 ~~gy~eI~v~GlSmGGv~alkla~~~p~K~iv~m~a~~~~k~~~~iie~~l~y~~~~kk~e~k~~e~~~~e~~~~~~~~~ 160 (243)
T COG1647 81 EAGYDEIAVVGLSMGGVFALKLAYHYPPKKIVPMCAPVNVKSWRIIIEGLLEYFRNAKKYEGKDQEQIDKEMKSYKDTPM 160 (243)
T ss_pred HcCCCeEEEEeecchhHHHHHHHhhCCccceeeecCCcccccchhhhHHHHHHHHHhhhccCCCHHHHHHHHHHhhcchH
Confidence 999999999999999999999999998999999887651
Q ss_pred ------------CccccccccccEEEeecCCCCCCCHHHHHHHHHHHHhccCCCeeEEEeCCCCccccccCCCCChHHHH
Q 025842 159 ------------TVDDINEIKVPVAILGAEIDHVSPPEDLKRFGEILSAKLKNDCLVKIYPRVSHGWTVRYNVEDEFAVK 226 (247)
Q Consensus 159 ------------~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~ 226 (247)
....+..|..|+++++|.+|+++|.+.+..+++.+... +.++.+|++.||....+ .
T Consensus 161 ~~~~~~~~~i~~~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~---~KeL~~~e~SgHVIt~D---------~ 228 (243)
T COG1647 161 TTTAQLKKLIKDARRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVESD---DKELKWLEGSGHVITLD---------K 228 (243)
T ss_pred HHHHHHHHHHHHHHhhhhhcccchhheecccCCCCCHHHHHHHHHhccCC---cceeEEEccCCceeecc---------h
Confidence 13356778899999999999999999999999998433 78999999999998776 4
Q ss_pred HHHHHHHHHHHHHH
Q 025842 227 SAEEAHEDMINWLT 240 (247)
Q Consensus 227 ~~~~~~~~~~~fl~ 240 (247)
..+.+.+.++.||+
T Consensus 229 Erd~v~e~V~~FL~ 242 (243)
T COG1647 229 ERDQVEEDVITFLE 242 (243)
T ss_pred hHHHHHHHHHHHhh
Confidence 57899999999986
No 5
>PRK13604 luxD acyl transferase; Provisional
Probab=99.93 E-value=1.1e-24 Score=172.49 Aligned_cols=172 Identities=16% Similarity=0.224 Sum_probs=133.4
Q ss_pred ceEEEeecCC--CCCCeEEEEEcCccCCCcchHHHHHHHHHhcCcEEEEeccC-C-CCCccCCCCcccchHHHHhhcCCc
Q 025842 30 LNTYVTGSGP--PDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-Y-GDPIVDLNNPQFDREAWRKIHNTD 105 (247)
Q Consensus 30 ~~~~~~~p~~--~~~~~~vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~~-~-g~~~~~~~~~~~~~~~~~~~~~~~ 105 (247)
+.+|+..|.. ..+.+.||+.| |++.+...+..+|+.|+++||.|+.+|+| + |.|.+.... .+..
T Consensus 22 L~Gwl~~P~~~~~~~~~~vIi~H-Gf~~~~~~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~~~-----------~t~s 89 (307)
T PRK13604 22 IRVWETLPKENSPKKNNTILIAS-GFARRMDHFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTIDE-----------FTMS 89 (307)
T ss_pred EEEEEEcCcccCCCCCCEEEEeC-CCCCChHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCcccc-----------Cccc
Confidence 7888887752 23456777777 66666556889999999999999999987 5 665411111 1112
Q ss_pred cccchHHHHHHHHHhcCCCeEEEEEecccHHHHHHhhcCCCccEEEEecCCCCC--------------------------
Q 025842 106 KGYVDAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLASSHDIQAAVVLHPGAIT-------------------------- 159 (247)
Q Consensus 106 ~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~~i~~~v~~~~~~~~-------------------------- 159 (247)
....|+.++++|+++.+.++|+++||||||.+++.+|...+++++|+.+|....
T Consensus 90 ~g~~Dl~aaid~lk~~~~~~I~LiG~SmGgava~~~A~~~~v~~lI~~sp~~~l~d~l~~~~~~~~~~~p~~~lp~~~d~ 169 (307)
T PRK13604 90 IGKNSLLTVVDWLNTRGINNLGLIAASLSARIAYEVINEIDLSFLITAVGVVNLRDTLERALGYDYLSLPIDELPEDLDF 169 (307)
T ss_pred ccHHHHHHHHHHHHhcCCCceEEEEECHHHHHHHHHhcCCCCCEEEEcCCcccHHHHHHHhhhcccccCccccccccccc
Confidence 234899999999999877899999999999999888876678889888777530
Q ss_pred -------------------c------cccccccccEEEeecCCCCCCCHHHHHHHHHHHHhccCCCeeEEEeCCCCcccc
Q 025842 160 -------------------V------DDINEIKVPVAILGAEIDHVSPPEDLKRFGEILSAKLKNDCLVKIYPRVSHGWT 214 (247)
Q Consensus 160 -------------------~------~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~H~~~ 214 (247)
. +..++++.|+|++||++|.+||.+.++++++.++. .+++++.++|+.|.|.
T Consensus 170 ~g~~l~~~~f~~~~~~~~~~~~~s~i~~~~~l~~PvLiIHG~~D~lVp~~~s~~l~e~~~s---~~kkl~~i~Ga~H~l~ 246 (307)
T PRK13604 170 EGHNLGSEVFVTDCFKHGWDTLDSTINKMKGLDIPFIAFTANNDSWVKQSEVIDLLDSIRS---EQCKLYSLIGSSHDLG 246 (307)
T ss_pred ccccccHHHHHHHHHhcCccccccHHHHHhhcCCCEEEEEcCCCCccCHHHHHHHHHHhcc---CCcEEEEeCCCccccC
Confidence 0 11335678999999999999999999999998732 2789999999999986
Q ss_pred cc
Q 025842 215 VR 216 (247)
Q Consensus 215 ~~ 216 (247)
..
T Consensus 247 ~~ 248 (307)
T PRK13604 247 EN 248 (307)
T ss_pred cc
Confidence 64
No 6
>PHA02857 monoglyceride lipase; Provisional
Probab=99.93 E-value=2.3e-24 Score=172.61 Aligned_cols=196 Identities=17% Similarity=0.186 Sum_probs=143.8
Q ss_pred EeecCceEEEeecCC-CCCCeEEEEEcCccCCCcchHHHHHHHHHhcCcEEEEeccC-CCCCccCCCCcccchHHHHhhc
Q 025842 25 QQLGGLNTYVTGSGP-PDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIH 102 (247)
Q Consensus 25 ~~~~~~~~~~~~p~~-~~~~~~vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~~-~g~~~~~~~~~~~~~~~~~~~~ 102 (247)
...+|...++....+ ..+++.|+++| |++.+...|..+++.|+++||.|+++|+| +|.|. ........+.
T Consensus 6 ~~~~g~~l~~~~~~~~~~~~~~v~llH-G~~~~~~~~~~~~~~l~~~g~~via~D~~G~G~S~-~~~~~~~~~~------ 77 (276)
T PHA02857 6 FNLDNDYIYCKYWKPITYPKALVFISH-GAGEHSGRYEELAENISSLGILVFSHDHIGHGRSN-GEKMMIDDFG------ 77 (276)
T ss_pred ecCCCCEEEEEeccCCCCCCEEEEEeC-CCccccchHHHHHHHHHhCCCEEEEccCCCCCCCC-CccCCcCCHH------
Confidence 344665555544333 34566666668 55666788999999999999999999999 88765 1111111222
Q ss_pred CCccccchHHHHHHHHHhc-CCCeEEEEEecccHHHHHHhhcCC--CccEEEEecCCCCC--------------------
Q 025842 103 NTDKGYVDAKSVIAALKSK-GVSAIGAAGFCWGGVVAAKLASSH--DIQAAVVLHPGAIT-------------------- 159 (247)
Q Consensus 103 ~~~~~~~d~~~~i~~l~~~-~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~~~~~~-------------------- 159 (247)
...+|+...++++++. ...+++++|||+||.+++.+|... .++++|+++|....
T Consensus 78 ---~~~~d~~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~~~~~~~~~~~~~~~~~~~~~ 154 (276)
T PHA02857 78 ---VYVRDVVQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVNAEAVPRLNLLAAKLMGIFYPN 154 (276)
T ss_pred ---HHHHHHHHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhCccccceEEEeccccccccccHHHHHHHHHHHHhCCC
Confidence 2236777777777654 346899999999999999988544 68999998875200
Q ss_pred -----------------------------------------------ccccccccccEEEeecCCCCCCCHHHHHHHHHH
Q 025842 160 -----------------------------------------------VDDINEIKVPVAILGAEIDHVSPPEDLKRFGEI 192 (247)
Q Consensus 160 -----------------------------------------------~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~ 192 (247)
.+.+.++++|+|+++|++|.++|.+.++.+.+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~l~~~ 234 (276)
T PHA02857 155 KIVGKLCPESVSRDMDEVYKYQYDPLVNHEKIKAGFASQVLKATNKVRKIIPKIKTPILILQGTNNEISDVSGAYYFMQH 234 (276)
T ss_pred CccCCCCHhhccCCHHHHHHHhcCCCccCCCccHHHHHHHHHHHHHHHHhcccCCCCEEEEecCCCCcCChHHHHHHHHH
Confidence 012456789999999999999999999999887
Q ss_pred HHhccCCCeeEEEeCCCCccccccCCCCChHHHHHHHHHHHHHHHHHHHH
Q 025842 193 LSAKLKNDCLVKIYPRVSHGWTVRYNVEDEFAVKSAEEAHEDMINWLTKY 242 (247)
Q Consensus 193 l~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~ 242 (247)
+. . ++++.++++++|....... +..+++++++.+||+++
T Consensus 235 ~~-~---~~~~~~~~~~gH~~~~e~~-------~~~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 235 AN-C---NREIKIYEGAKHHLHKETD-------EVKKSVMKEIETWIFNR 273 (276)
T ss_pred cc-C---CceEEEeCCCcccccCCch-------hHHHHHHHHHHHHHHHh
Confidence 72 1 5789999999998875433 25789999999999986
No 7
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.93 E-value=3.2e-24 Score=177.27 Aligned_cols=201 Identities=22% Similarity=0.239 Sum_probs=143.5
Q ss_pred EEeecCceEEEeecC--CCCCCeEEEEEcCccCCCcc-hHHHHHHHHHhcCcEEEEeccC-CCCCccCCCCcccchHHHH
Q 025842 24 VQQLGGLNTYVTGSG--PPDSKSAILLISDVFGYEAP-LFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWR 99 (247)
Q Consensus 24 ~~~~~~~~~~~~~p~--~~~~~~~vv~~hgg~g~~~~-~~~~~a~~la~~G~~v~~~d~~-~g~~~~~~~~~~~~~~~~~ 99 (247)
..+.+|+..++.... ...++++|||+||+ +.+.. .|..++..|+++||.|+++|++ ||.|. .+.....++
T Consensus 66 ~~~~~g~~l~~~~~~p~~~~~~~~iv~lHG~-~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~-~~~~~~~~~---- 139 (349)
T PLN02385 66 EVNSRGVEIFSKSWLPENSRPKAAVCFCHGY-GDTCTFFFEGIARKIASSGYGVFAMDYPGFGLSE-GLHGYIPSF---- 139 (349)
T ss_pred EEcCCCCEEEEEEEecCCCCCCeEEEEECCC-CCccchHHHHHHHHHHhCCCEEEEecCCCCCCCC-CCCCCcCCH----
Confidence 344567766655433 23456889999954 44433 4678999999999999999998 77765 221111122
Q ss_pred hhcCCccccchHHHHHHHHHhc---CCCeEEEEEecccHHHHHHhhcCC--CccEEEEecCCCC----------------
Q 025842 100 KIHNTDKGYVDAKSVIAALKSK---GVSAIGAAGFCWGGVVAAKLASSH--DIQAAVVLHPGAI---------------- 158 (247)
Q Consensus 100 ~~~~~~~~~~d~~~~i~~l~~~---~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~~~~~---------------- 158 (247)
+..++|+.++++.+... +..+++++||||||.+++.++..+ .++++|+++|...
T Consensus 140 -----~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~~~~~~~~~~~~~~ 214 (349)
T PLN02385 140 -----DDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIADDVVPPPLVLQILI 214 (349)
T ss_pred -----HHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEecccccccccccCchHHHHHHH
Confidence 23347788888877643 345899999999999999988554 7888888775320
Q ss_pred -------------C-------------------------------------------ccccccccccEEEeecCCCCCCC
Q 025842 159 -------------T-------------------------------------------VDDINEIKVPVAILGAEIDHVSP 182 (247)
Q Consensus 159 -------------~-------------------------------------------~~~~~~~~~P~l~i~g~~D~~~~ 182 (247)
. ...+.++++|+|+++|++|.++|
T Consensus 215 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~i~~P~Lii~G~~D~vv~ 294 (349)
T PLN02385 215 LLANLLPKAKLVPQKDLAELAFRDLKKRKMAEYNVIAYKDKPRLRTAVELLRTTQEIEMQLEEVSLPLLILHGEADKVTD 294 (349)
T ss_pred HHHHHCCCceecCCCccccccccCHHHHHHhhcCcceeCCCcchHHHHHHHHHHHHHHHhcccCCCCEEEEEeCCCCccC
Confidence 0 01234578999999999999999
Q ss_pred HHHHHHHHHHHHhccCCCeeEEEeCCCCccccccCCCCChHHHHHHHHHHHHHHHHHHHHhc
Q 025842 183 PEDLKRFGEILSAKLKNDCLVKIYPRVSHGWTVRYNVEDEFAVKSAEEAHEDMINWLTKYVK 244 (247)
Q Consensus 183 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~ 244 (247)
.+.++.+.+.++ .+ ++++++|++++|.+...... +..+++.+.+++||+++..
T Consensus 295 ~~~~~~l~~~~~-~~--~~~l~~i~~~gH~l~~e~p~------~~~~~v~~~i~~wL~~~~~ 347 (349)
T PLN02385 295 PSVSKFLYEKAS-SS--DKKLKLYEDAYHSILEGEPD------EMIFQVLDDIISWLDSHST 347 (349)
T ss_pred hHHHHHHHHHcC-CC--CceEEEeCCCeeecccCCCh------hhHHHHHHHHHHHHHHhcc
Confidence 999999998872 22 57899999999987654332 1255689999999998874
No 8
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.93 E-value=1.5e-24 Score=190.52 Aligned_cols=200 Identities=19% Similarity=0.264 Sum_probs=154.4
Q ss_pred ceEEEeecCCCCC---CeEEEEEcCccC-CCcchHHHHHHHHHhcCcEEEEeccCCCCCccCCCCcccchHHHHhhcCCc
Q 025842 30 LNTYVTGSGPPDS---KSAILLISDVFG-YEAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTD 105 (247)
Q Consensus 30 ~~~~~~~p~~~~~---~~~vv~~hgg~g-~~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~ 105 (247)
+.+|++.|.+..+ .|.||++|||.. .....+....+.|+++||.|+.+++| |+.. .+.++........-.
T Consensus 378 i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~R-GS~G-----yG~~F~~~~~~~~g~ 451 (620)
T COG1506 378 IHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYR-GSTG-----YGREFADAIRGDWGG 451 (620)
T ss_pred EEEEEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCC-CCCc-----cHHHHHHhhhhccCC
Confidence 8899998765433 488999998853 22234566788999999999999996 4322 111222222222335
Q ss_pred cccchHHHHHHHHHhc---CCCeEEEEEecccHHHHHHhhcC-CCccEEEEecCCCC-----------------------
Q 025842 106 KGYVDAKSVIAALKSK---GVSAIGAAGFCWGGVVAAKLASS-HDIQAAVVLHPGAI----------------------- 158 (247)
Q Consensus 106 ~~~~d~~~~i~~l~~~---~~~~i~l~G~S~Gg~~a~~~a~~-~~i~~~v~~~~~~~----------------------- 158 (247)
...+|+.++++++.+. +.+||+++|+|.||+|++.++.. +.++++++..+...
T Consensus 452 ~~~~D~~~~~~~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~~f~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 531 (620)
T COG1506 452 VDLEDLIAAVDALVKLPLVDPERIGITGGSYGGYMTLLAATKTPRFKAAVAVAGGVDWLLYFGESTEGLRFDPEENGGGP 531 (620)
T ss_pred ccHHHHHHHHHHHHhCCCcChHHeEEeccChHHHHHHHHHhcCchhheEEeccCcchhhhhccccchhhcCCHHHhCCCc
Confidence 5668999999988776 56799999999999999997754 47898888776541
Q ss_pred -----------CccccccccccEEEeecCCCCCCCHHHHHHHHHHHHhccCCCeeEEEeCCCCccccccCCCCChHHHHH
Q 025842 159 -----------TVDDINEIKVPVAILGAEIDHVSPPEDLKRFGEILSAKLKNDCLVKIYPRVSHGWTVRYNVEDEFAVKS 227 (247)
Q Consensus 159 -----------~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~ 227 (247)
+.....++++|+|+|||.+|..||.+.+.++.+.| +..|+++++++||+.+|.+... ++
T Consensus 532 ~~~~~~~~~~sp~~~~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL-~~~g~~~~~~~~p~e~H~~~~~---------~~ 601 (620)
T COG1506 532 PEDREKYEDRSPIFYADNIKTPLLLIHGEEDDRVPIEQAEQLVDAL-KRKGKPVELVVFPDEGHGFSRP---------EN 601 (620)
T ss_pred ccChHHHHhcChhhhhcccCCCEEEEeecCCccCChHHHHHHHHHH-HHcCceEEEEEeCCCCcCCCCc---------hh
Confidence 01135678999999999999999999999999999 5689999999999999999774 35
Q ss_pred HHHHHHHHHHHHHHHhcc
Q 025842 228 AEEAHEDMINWLTKYVKR 245 (247)
Q Consensus 228 ~~~~~~~~~~fl~~~~~~ 245 (247)
....++++++||+++++.
T Consensus 602 ~~~~~~~~~~~~~~~~~~ 619 (620)
T COG1506 602 RVKVLKEILDWFKRHLKQ 619 (620)
T ss_pred HHHHHHHHHHHHHHHhcC
Confidence 678999999999999875
No 9
>PRK10566 esterase; Provisional
Probab=99.93 E-value=6.4e-24 Score=167.56 Aligned_cols=197 Identities=16% Similarity=0.214 Sum_probs=138.3
Q ss_pred ecCceEEEeecCCC--CCCeEEEEEcCccCCCcchHHHHHHHHHhcCcEEEEeccC-CCCCccCCCCcccchHHHHhhcC
Q 025842 27 LGGLNTYVTGSGPP--DSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHN 103 (247)
Q Consensus 27 ~~~~~~~~~~p~~~--~~~~~vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~~-~g~~~~~~~~~~~~~~~~~~~~~ 103 (247)
..++..+.+.|... ++.|.||++||. +.+...+..+++.|+++||.|+++|++ +|.+. ..........|...
T Consensus 9 ~~~~~~~~~~p~~~~~~~~p~vv~~HG~-~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~~~--~~~~~~~~~~~~~~-- 83 (249)
T PRK10566 9 LAGIEVLHAFPAGQRDTPLPTVFFYHGF-TSSKLVYSYFAVALAQAGFRVIMPDAPMHGARF--SGDEARRLNHFWQI-- 83 (249)
T ss_pred ecCcceEEEcCCCCCCCCCCEEEEeCCC-CcccchHHHHHHHHHhCCCEEEEecCCcccccC--CCccccchhhHHHH--
Confidence 45667676666432 346889999954 545567788999999999999999998 66542 11111222222110
Q ss_pred CccccchHHHHHHHHHhc---CCCeEEEEEecccHHHHHHhhcC-CCccEEEEecCCCC----------C----------
Q 025842 104 TDKGYVDAKSVIAALKSK---GVSAIGAAGFCWGGVVAAKLASS-HDIQAAVVLHPGAI----------T---------- 159 (247)
Q Consensus 104 ~~~~~~d~~~~i~~l~~~---~~~~i~l~G~S~Gg~~a~~~a~~-~~i~~~v~~~~~~~----------~---------- 159 (247)
.....+|+.++++++.+. +.++|+++|||+||.+++.++.. +.+++.+.+.+... .
T Consensus 84 ~~~~~~~~~~~~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (249)
T PRK10566 84 LLQNMQEFPTLRAAIREEGWLLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMGSGYFTSLARTLFPPLIPETAAQQA 163 (249)
T ss_pred HHHHHHHHHHHHHHHHhcCCcCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeCcHHHHHHHHHhcccccccccccHH
Confidence 112236677788888765 45799999999999999998754 46766654432210 0
Q ss_pred --------------ccccccc-cccEEEeecCCCCCCCHHHHHHHHHHHHhccCC--CeeEEEeCCCCccccccCCCCCh
Q 025842 160 --------------VDDINEI-KVPVAILGAEIDHVSPPEDLKRFGEILSAKLKN--DCLVKIYPRVSHGWTVRYNVEDE 222 (247)
Q Consensus 160 --------------~~~~~~~-~~P~l~i~g~~D~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~H~~~~~~~~~~~ 222 (247)
...+.++ ++|+|+++|++|.++|.+.++.+.+.+ ...|. +++++.|++++|.+.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l-~~~g~~~~~~~~~~~~~~H~~~-------- 234 (249)
T PRK10566 164 EFNNIVAPLAEWEVTHQLEQLADRPLLLWHGLADDVVPAAESLRLQQAL-RERGLDKNLTCLWEPGVRHRIT-------- 234 (249)
T ss_pred HHHHHHHHHhhcChhhhhhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHH-HhcCCCcceEEEecCCCCCccC--------
Confidence 0123344 689999999999999999999999999 44554 478889999999863
Q ss_pred HHHHHHHHHHHHHHHHHHHHh
Q 025842 223 FAVKSAEEAHEDMINWLTKYV 243 (247)
Q Consensus 223 ~~~~~~~~~~~~~~~fl~~~~ 243 (247)
....+++++||++++
T Consensus 235 ------~~~~~~~~~fl~~~~ 249 (249)
T PRK10566 235 ------PEALDAGVAFFRQHL 249 (249)
T ss_pred ------HHHHHHHHHHHHhhC
Confidence 257899999999875
No 10
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.93 E-value=3.9e-24 Score=165.21 Aligned_cols=203 Identities=23% Similarity=0.267 Sum_probs=151.5
Q ss_pred CCceEEeecCceEEEeecCC---CCCCeEEEEEcCccCCC-cchHHHHHHHHHhcCcEEEEeccC-CCCCccCCCCcccc
Q 025842 20 GAGTVQQLGGLNTYVTGSGP---PDSKSAILLISDVFGYE-APLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFD 94 (247)
Q Consensus 20 ~~~~~~~~~~~~~~~~~p~~---~~~~~~vv~~hgg~g~~-~~~~~~~a~~la~~G~~v~~~d~~-~g~~~~~~~~~~~~ 94 (247)
+...+++..|...+...+.+ ..++..|+++| |+|.+ +..+..++..|+..||.|+++|++ ||.|. -...
T Consensus 28 ~~~~~~n~rG~~lft~~W~p~~~~~pr~lv~~~H-G~g~~~s~~~~~~a~~l~~~g~~v~a~D~~GhG~Sd--Gl~~--- 101 (313)
T KOG1455|consen 28 SESFFTNPRGAKLFTQSWLPLSGTEPRGLVFLCH-GYGEHSSWRYQSTAKRLAKSGFAVYAIDYEGHGRSD--GLHA--- 101 (313)
T ss_pred eeeeEEcCCCCEeEEEecccCCCCCCceEEEEEc-CCcccchhhHHHHHHHHHhCCCeEEEeeccCCCcCC--CCcc---
Confidence 33445566776666665444 23455667777 66644 356678999999999999999998 77754 1111
Q ss_pred hHHHHhhcCCccccchHHHHHHHHHhc---CCCeEEEEEecccHHHHHHhhc-CC-CccEEEEecCCCC-----------
Q 025842 95 REAWRKIHNTDKGYVDAKSVIAALKSK---GVSAIGAAGFCWGGVVAAKLAS-SH-DIQAAVVLHPGAI----------- 158 (247)
Q Consensus 95 ~~~~~~~~~~~~~~~d~~~~i~~l~~~---~~~~i~l~G~S~Gg~~a~~~a~-~~-~i~~~v~~~~~~~----------- 158 (247)
.-.+.+..++|+...++.++.+ ...+..++||||||.+++.++. ++ ...++|++.|...
T Consensus 102 -----yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~kp~p~v 176 (313)
T KOG1455|consen 102 -----YVPSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCKISEDTKPHPPV 176 (313)
T ss_pred -----cCCcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeecccccCCccCCCcHH
Confidence 1123344558888888877665 3458999999999999999986 44 7788888887760
Q ss_pred -------------------------------------------------------------CccccccccccEEEeecCC
Q 025842 159 -------------------------------------------------------------TVDDINEIKVPVAILGAEI 177 (247)
Q Consensus 159 -------------------------------------------------------------~~~~~~~~~~P~l~i~g~~ 177 (247)
..+.+.+++.|++++||++
T Consensus 177 ~~~l~~l~~liP~wk~vp~~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~~~le~~l~~vtvPflilHG~d 256 (313)
T KOG1455|consen 177 ISILTLLSKLIPTWKIVPTKDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVTADLEKNLNEVTVPFLILHGTD 256 (313)
T ss_pred HHHHHHHHHhCCceeecCCccccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHHHHHHHHhcccccccEEEEecCC
Confidence 0335778999999999999
Q ss_pred CCCCCHHHHHHHHHHHHhccCCCeeEEEeCCCCccccccCCCCChHHHHHHHHHHHHHHHHHHHH
Q 025842 178 DHVSPPEDLKRFGEILSAKLKNDCLVKIYPRVSHGWTVRYNVEDEFAVKSAEEAHEDMINWLTKY 242 (247)
Q Consensus 178 D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~ 242 (247)
|.++.+..++.+++..+.+ ++++.+|||+-|.+..--.. +..+.+..+|++||+++
T Consensus 257 D~VTDp~~Sk~Lye~A~S~---DKTlKlYpGm~H~Ll~gE~~------en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 257 DKVTDPKVSKELYEKASSS---DKTLKLYPGMWHSLLSGEPD------ENVEIVFGDIISWLDER 312 (313)
T ss_pred CcccCcHHHHHHHHhccCC---CCceeccccHHHHhhcCCCc------hhHHHHHHHHHHHHHhc
Confidence 9999999999999988443 88999999999998751111 36889999999999875
No 11
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.93 E-value=7.4e-24 Score=173.91 Aligned_cols=205 Identities=19% Similarity=0.220 Sum_probs=146.5
Q ss_pred ceEEeecCceEEEeecCCC---CCCeEEEEEcCccCCCcchHHHHHHHHHhcCcEEEEeccC-CCCCccCCCCcccchHH
Q 025842 22 GTVQQLGGLNTYVTGSGPP---DSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREA 97 (247)
Q Consensus 22 ~~~~~~~~~~~~~~~p~~~---~~~~~vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~~-~g~~~~~~~~~~~~~~~ 97 (247)
..+...+|...++....+. .+++.|||+||..+.....+..++..|+++||.|+++|+| ||.|. .......
T Consensus 35 ~~~~~~dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~-~~~~~~~---- 109 (330)
T PLN02298 35 SFFTSPRGLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQSTAIFLAQMGFACFALDLEGHGRSE-GLRAYVP---- 109 (330)
T ss_pred ceEEcCCCCEEEEEEEecCCCCCCceEEEEEcCCCCCcceehhHHHHHHHhCCCEEEEecCCCCCCCC-CccccCC----
Confidence 3455668887776543222 3467799999553332234567788899999999999999 88764 1111111
Q ss_pred HHhhcCCccccchHHHHHHHHHhc---CCCeEEEEEecccHHHHHHhhcCC--CccEEEEecCCCCC-------------
Q 025842 98 WRKIHNTDKGYVDAKSVIAALKSK---GVSAIGAAGFCWGGVVAAKLASSH--DIQAAVVLHPGAIT------------- 159 (247)
Q Consensus 98 ~~~~~~~~~~~~d~~~~i~~l~~~---~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~~~~~~------------- 159 (247)
+.+...+|+.++++++... +..+++++||||||.+++.++... +++++|+++|....
T Consensus 110 -----~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~ 184 (330)
T PLN02298 110 -----NVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCKISDKIRPPWPIPQI 184 (330)
T ss_pred -----CHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccccCCcccCCchHHHHH
Confidence 2233458999999999764 235899999999999999988544 69999988764200
Q ss_pred -----------------------------------------------------------ccccccccccEEEeecCCCCC
Q 025842 160 -----------------------------------------------------------VDDINEIKVPVAILGAEIDHV 180 (247)
Q Consensus 160 -----------------------------------------------------------~~~~~~~~~P~l~i~g~~D~~ 180 (247)
...+.++++|+|+++|++|.+
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~i 264 (330)
T PLN02298 185 LTFVARFLPTLAIVPTADLLEKSVKVPAKKIIAKRNPMRYNGKPRLGTVVELLRVTDYLGKKLKDVSIPFIVLHGSADVV 264 (330)
T ss_pred HHHHHHHCCCCccccCCCcccccccCHHHHHHHHhCccccCCCccHHHHHHHHHHHHHHHHhhhhcCCCEEEEecCCCCC
Confidence 001235779999999999999
Q ss_pred CCHHHHHHHHHHHHhccCCCeeEEEeCCCCccccccCCCCChHHHHHHHHHHHHHHHHHHHHhcc
Q 025842 181 SPPEDLKRFGEILSAKLKNDCLVKIYPRVSHGWTVRYNVEDEFAVKSAEEAHEDMINWLTKYVKR 245 (247)
Q Consensus 181 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~ 245 (247)
+|.+.++.+++.++. + +++++++++++|........ ...+.+.+.+.+||.+++..
T Consensus 265 vp~~~~~~l~~~i~~-~--~~~l~~~~~a~H~~~~e~pd------~~~~~~~~~i~~fl~~~~~~ 320 (330)
T PLN02298 265 TDPDVSRALYEEAKS-E--DKTIKIYDGMMHSLLFGEPD------ENIEIVRRDILSWLNERCTG 320 (330)
T ss_pred CCHHHHHHHHHHhcc-C--CceEEEcCCcEeeeecCCCH------HHHHHHHHHHHHHHHHhccC
Confidence 999999999988732 2 57899999999987643221 13567899999999998754
No 12
>PRK10749 lysophospholipase L2; Provisional
Probab=99.92 E-value=4e-23 Score=169.39 Aligned_cols=208 Identities=13% Similarity=0.067 Sum_probs=148.2
Q ss_pred ceEEeecCceEEEeecCCCCCCeEEEEEcCccCCCcchHHHHHHHHHhcCcEEEEeccC-CCCCccCCCCcccchHHHHh
Q 025842 22 GTVQQLGGLNTYVTGSGPPDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRK 100 (247)
Q Consensus 22 ~~~~~~~~~~~~~~~p~~~~~~~~vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~~-~g~~~~~~~~~~~~~~~~~~ 100 (247)
..+...+|...++....+..++++||++| |++.+...|..++..|+++||.|+++|+| ||.|. .+...... ..
T Consensus 33 ~~~~~~~g~~l~~~~~~~~~~~~~vll~H-G~~~~~~~y~~~~~~l~~~g~~v~~~D~~G~G~S~-~~~~~~~~----~~ 106 (330)
T PRK10749 33 AEFTGVDDIPIRFVRFRAPHHDRVVVICP-GRIESYVKYAELAYDLFHLGYDVLIIDHRGQGRSG-RLLDDPHR----GH 106 (330)
T ss_pred eEEEcCCCCEEEEEEccCCCCCcEEEEEC-CccchHHHHHHHHHHHHHCCCeEEEEcCCCCCCCC-CCCCCCCc----Cc
Confidence 44556788887777644434567788888 55666667888999999999999999999 88765 22111000 00
Q ss_pred hcCCccccchHHHHHHHHHhc-CCCeEEEEEecccHHHHHHhhcC-C-CccEEEEecCCCCC------------------
Q 025842 101 IHNTDKGYVDAKSVIAALKSK-GVSAIGAAGFCWGGVVAAKLASS-H-DIQAAVVLHPGAIT------------------ 159 (247)
Q Consensus 101 ~~~~~~~~~d~~~~i~~l~~~-~~~~i~l~G~S~Gg~~a~~~a~~-~-~i~~~v~~~~~~~~------------------ 159 (247)
..+.+...+|+.++++.+... +..++.++||||||.+++.++.. + .++++|+++|....
T Consensus 107 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~ 186 (330)
T PRK10749 107 VERFNDYVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIVLPLPSWMARRILNWAEG 186 (330)
T ss_pred cccHHHHHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhccCCCCCcHHHHHHHHHHHH
Confidence 012233447888888876544 56799999999999999987744 3 78888888764200
Q ss_pred ----------------------------c-------------------------------------cccccccccEEEee
Q 025842 160 ----------------------------V-------------------------------------DDINEIKVPVAILG 174 (247)
Q Consensus 160 ----------------------------~-------------------------------------~~~~~~~~P~l~i~ 174 (247)
. ..+.++++|+|+++
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~ 266 (330)
T PRK10749 187 HPRIRDGYAIGTGRWRPLPFAINVLTHSRERYRRNLRFYADDPELRVGGPTYHWVRESILAGEQVLAGAGDITTPLLLLQ 266 (330)
T ss_pred hcCCCCcCCCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHhCCCcccCCCcHHHHHHHHHHHHHHHhhccCCCCCEEEEE
Confidence 0 01245788999999
Q ss_pred cCCCCCCCHHHHHHHHHHHHhcc--CCCeeEEEeCCCCccccccCCCCChHHHHHHHHHHHHHHHHHHHH
Q 025842 175 AEIDHVSPPEDLKRFGEILSAKL--KNDCLVKIYPRVSHGWTVRYNVEDEFAVKSAEEAHEDMINWLTKY 242 (247)
Q Consensus 175 g~~D~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~ 242 (247)
|++|.+++.+.++.+.+.++... ..++++++|+|++|....... ...+.+++.+++||+++
T Consensus 267 G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~-------~~r~~v~~~i~~fl~~~ 329 (330)
T PRK10749 267 AEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKD-------AMRSVALNAIVDFFNRH 329 (330)
T ss_pred eCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCc-------HHHHHHHHHHHHHHhhc
Confidence 99999999999999998884321 135689999999998765422 13678999999999864
No 13
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.91 E-value=1.1e-22 Score=169.49 Aligned_cols=182 Identities=20% Similarity=0.294 Sum_probs=137.4
Q ss_pred CCCCeEEEEEcCccCCCcchHHHHHHHHHhcCcEEEEeccC-CCCCccCCCCcccchHHHHhhcCCccccchHHHHHHHH
Q 025842 40 PDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAAL 118 (247)
Q Consensus 40 ~~~~~~vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l 118 (247)
..++++||++||. +.+...|..+++.|+++||.|+++|++ +|.+. .......+ .+...+|+.++++++
T Consensus 133 ~~~~~~Vl~lHG~-~~~~~~~~~~a~~L~~~Gy~V~~~D~rGhG~S~-~~~~~~~~---------~~~~~~Dl~~~l~~l 201 (395)
T PLN02652 133 GEMRGILIIIHGL-NEHSGRYLHFAKQLTSCGFGVYAMDWIGHGGSD-GLHGYVPS---------LDYVVEDTEAFLEKI 201 (395)
T ss_pred CCCceEEEEECCc-hHHHHHHHHHHHHHHHCCCEEEEeCCCCCCCCC-CCCCCCcC---------HHHHHHHHHHHHHHH
Confidence 3456788999954 545566889999999999999999998 77754 11111111 122348899999998
Q ss_pred Hhc-CCCeEEEEEecccHHHHHHhhcCC----CccEEEEecCCCCC----------------------------------
Q 025842 119 KSK-GVSAIGAAGFCWGGVVAAKLASSH----DIQAAVVLHPGAIT---------------------------------- 159 (247)
Q Consensus 119 ~~~-~~~~i~l~G~S~Gg~~a~~~a~~~----~i~~~v~~~~~~~~---------------------------------- 159 (247)
... +..+++++||||||.+++.++..+ .++++|+.+|....
T Consensus 202 ~~~~~~~~i~lvGhSmGG~ial~~a~~p~~~~~v~glVL~sP~l~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~~~~~~s 281 (395)
T PLN02652 202 RSENPGVPCFLFGHSTGGAVVLKAASYPSIEDKLEGIVLTSPALRVKPAHPIVGAVAPIFSLVAPRFQFKGANKRGIPVS 281 (395)
T ss_pred HHhCCCCCEEEEEECHHHHHHHHHHhccCcccccceEEEECcccccccchHHHHHHHHHHHHhCCCCcccCcccccCCcC
Confidence 865 345899999999999999887543 68899988875300
Q ss_pred -----------------------------------ccccccccccEEEeecCCCCCCCHHHHHHHHHHHHhccCCCeeEE
Q 025842 160 -----------------------------------VDDINEIKVPVAILGAEIDHVSPPEDLKRFGEILSAKLKNDCLVK 204 (247)
Q Consensus 160 -----------------------------------~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~ 204 (247)
...+.++++|+|+++|++|.++|.+.++.+++.+.. ..++++
T Consensus 282 ~~~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~~~l~~~L~~I~vPvLIi~G~~D~vvp~~~a~~l~~~~~~---~~k~l~ 358 (395)
T PLN02652 282 RDPAALLAKYSDPLVYTGPIRVRTGHEILRISSYLTRNFKSVTVPFMVLHGTADRVTDPLASQDLYNEAAS---RHKDIK 358 (395)
T ss_pred CCHHHHHHHhcCCCcccCCchHHHHHHHHHHHHHHHhhcccCCCCEEEEEeCCCCCCCHHHHHHHHHhcCC---CCceEE
Confidence 012355789999999999999999999999998732 257899
Q ss_pred EeCCCCccccccCCCCChHHHHHHHHHHHHHHHHHHHHhc
Q 025842 205 IYPRVSHGWTVRYNVEDEFAVKSAEEAHEDMINWLTKYVK 244 (247)
Q Consensus 205 ~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~ 244 (247)
+|++++|...... ..+++++.+.+||..++.
T Consensus 359 ~~~ga~H~l~~e~---------~~e~v~~~I~~FL~~~~~ 389 (395)
T PLN02652 359 LYDGFLHDLLFEP---------EREEVGRDIIDWMEKRLD 389 (395)
T ss_pred EECCCeEEeccCC---------CHHHHHHHHHHHHHHHhh
Confidence 9999999875531 368999999999998875
No 14
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.91 E-value=1.8e-23 Score=161.26 Aligned_cols=166 Identities=23% Similarity=0.330 Sum_probs=126.4
Q ss_pred HHHHHHHHhcCcEEEEeccCCCCCccCCCCcccchHHHHh---hcCCccccchHHHHHHHHHhc---CCCeEEEEEeccc
Q 025842 61 RKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRK---IHNTDKGYVDAKSVIAALKSK---GVSAIGAAGFCWG 134 (247)
Q Consensus 61 ~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~---~~~~~~~~~d~~~~i~~l~~~---~~~~i~l~G~S~G 134 (247)
......|+++||.|+.+|+| |.+. . + ..|.. ........+|+.++++++.+. +.+||+++|+|+|
T Consensus 4 ~~~~~~la~~Gy~v~~~~~r-Gs~g--~---g---~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~G 74 (213)
T PF00326_consen 4 NWNAQLLASQGYAVLVPNYR-GSGG--Y---G---KDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYG 74 (213)
T ss_dssp SHHHHHHHTTT-EEEEEE-T-TSSS--S---H---HHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHH
T ss_pred eHHHHHHHhCCEEEEEEcCC-CCCc--c---c---hhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEccccc
Confidence 35678899999999999996 3322 0 0 12221 111133458899999999876 5689999999999
Q ss_pred HHHHHHhhc-CC-CccEEEEecCCCCC---------------------------------cccccc--ccccEEEeecCC
Q 025842 135 GVVAAKLAS-SH-DIQAAVVLHPGAIT---------------------------------VDDINE--IKVPVAILGAEI 177 (247)
Q Consensus 135 g~~a~~~a~-~~-~i~~~v~~~~~~~~---------------------------------~~~~~~--~~~P~l~i~g~~ 177 (247)
|.+++.++. .+ .++++++.+|.... ...+.+ +++|+|++||++
T Consensus 75 G~~a~~~~~~~~~~f~a~v~~~g~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~P~li~hG~~ 154 (213)
T PF00326_consen 75 GYLALLAATQHPDRFKAAVAGAGVSDLFSYYGTTDIYTKAEYLEYGDPWDNPEFYRELSPISPADNVQIKPPVLIIHGEN 154 (213)
T ss_dssp HHHHHHHHHHTCCGSSEEEEESE-SSTTCSBHHTCCHHHGHHHHHSSTTTSHHHHHHHHHGGGGGGCGGGSEEEEEEETT
T ss_pred ccccchhhcccceeeeeeeccceecchhcccccccccccccccccCccchhhhhhhhhccccccccccCCCCEEEEccCC
Confidence 999999886 45 78999998876621 123445 789999999999
Q ss_pred CCCCCHHHHHHHHHHHHhccCCCeeEEEeCCCCccccccCCCCChHHHHHHHHHHHHHHHHHHHHhcc
Q 025842 178 DHVSPPEDLKRFGEILSAKLKNDCLVKIYPRVSHGWTVRYNVEDEFAVKSAEEAHEDMINWLTKYVKR 245 (247)
Q Consensus 178 D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~ 245 (247)
|..||...+..+.+.| ++.|+++++++||+++|++... .......+++++||++++++
T Consensus 155 D~~Vp~~~s~~~~~~L-~~~g~~~~~~~~p~~gH~~~~~---------~~~~~~~~~~~~f~~~~l~~ 212 (213)
T PF00326_consen 155 DPRVPPSQSLRLYNAL-RKAGKPVELLIFPGEGHGFGNP---------ENRRDWYERILDFFDKYLKK 212 (213)
T ss_dssp BSSSTTHHHHHHHHHH-HHTTSSEEEEEETT-SSSTTSH---------HHHHHHHHHHHHHHHHHTT-
T ss_pred CCccCHHHHHHHHHHH-HhcCCCEEEEEcCcCCCCCCCc---------hhHHHHHHHHHHHHHHHcCC
Confidence 9999999999999999 6788899999999999987654 34568999999999999975
No 15
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.90 E-value=6.1e-22 Score=159.09 Aligned_cols=207 Identities=21% Similarity=0.261 Sum_probs=157.6
Q ss_pred CCCceEEeecCceEEEeecCCCCCC-eEEEEEcCccCCCcchHHHHHHHHHhcCcEEEEeccC-CCCCccCCCCcccchH
Q 025842 19 CGAGTVQQLGGLNTYVTGSGPPDSK-SAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDRE 96 (247)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~p~~~~~~-~~vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~~-~g~~~~~~~~~~~~~~ 96 (247)
.+.+.....++...++.......+. ..||++| |.+-+...|..+++.|+.+||.|+++|.| ||.|. . .......
T Consensus 9 ~~~~~~~~~d~~~~~~~~~~~~~~~~g~Vvl~H-G~~Eh~~ry~~la~~l~~~G~~V~~~D~RGhG~S~--r-~~rg~~~ 84 (298)
T COG2267 9 RTEGYFTGADGTRLRYRTWAAPEPPKGVVVLVH-GLGEHSGRYEELADDLAARGFDVYALDLRGHGRSP--R-GQRGHVD 84 (298)
T ss_pred cccceeecCCCceEEEEeecCCCCCCcEEEEec-CchHHHHHHHHHHHHHHhCCCEEEEecCCCCCCCC--C-CCcCCch
Confidence 4556677888888888776555443 6777777 66666788999999999999999999999 88764 1 1111111
Q ss_pred HHHhhcCCccccchHHHHHHHHHhc-CCCeEEEEEecccHHHHHHhhcCC--CccEEEEecCCC----------------
Q 025842 97 AWRKIHNTDKGYVDAKSVIAALKSK-GVSAIGAAGFCWGGVVAAKLASSH--DIQAAVVLHPGA---------------- 157 (247)
Q Consensus 97 ~~~~~~~~~~~~~d~~~~i~~l~~~-~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~~~~---------------- 157 (247)
. +.....|+.++++.+.+. ...+++++||||||.+++.++.+. .|+++|+.+|.+
T Consensus 85 ~------f~~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~~~~~~~~~~~~~ 158 (298)
T COG2267 85 S------FADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLGGAILRLILARLAL 158 (298)
T ss_pred h------HHHHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCChhHHHHHHHHHhc
Confidence 1 223348899999888875 567999999999999999988554 899999988776
Q ss_pred -------------C----C-------------------------------------------ccccccccccEEEeecCC
Q 025842 158 -------------I----T-------------------------------------------VDDINEIKVPVAILGAEI 177 (247)
Q Consensus 158 -------------~----~-------------------------------------------~~~~~~~~~P~l~i~g~~ 177 (247)
. . ......+++|+|+++|++
T Consensus 159 ~~~~~~~p~~~~~~~~~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~~~~~~~~~~~~~PvLll~g~~ 238 (298)
T COG2267 159 KLLGRIRPKLPVDSNLLEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGRVPALRDAPAIALPVLLLQGGD 238 (298)
T ss_pred ccccccccccccCcccccCcCcchhhcCHHHHHHHhcCCccccCCccHHHHHHHHHhhcccchhccccccCCEEEEecCC
Confidence 1 1 012345688999999999
Q ss_pred CCCCC-HHHHHHHHHHHHhccCCCeeEEEeCCCCccccccCCCCChHHHHHHHHHHHHHHHHHHHHhcc
Q 025842 178 DHVSP-PEDLKRFGEILSAKLKNDCLVKIYPRVSHGWTVRYNVEDEFAVKSAEEAHEDMINWLTKYVKR 245 (247)
Q Consensus 178 D~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~ 245 (247)
|.+++ .+...++.+.++ .+ ++++++|+|+.|......+. ..+++++.+.+||.++.+.
T Consensus 239 D~vv~~~~~~~~~~~~~~-~~--~~~~~~~~g~~He~~~E~~~-------~r~~~~~~~~~~l~~~~~~ 297 (298)
T COG2267 239 DRVVDNVEGLARFFERAG-SP--DKELKVIPGAYHELLNEPDR-------AREEVLKDILAWLAEALPS 297 (298)
T ss_pred CccccCcHHHHHHHHhcC-CC--CceEEecCCcchhhhcCcch-------HHHHHHHHHHHHHHhhccC
Confidence 99999 688888888873 33 57999999999998776442 3389999999999988754
No 16
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.90 E-value=6e-22 Score=160.67 Aligned_cols=200 Identities=18% Similarity=0.229 Sum_probs=138.7
Q ss_pred CCCCCCCCceEEeecC-----ceEEEeecCCCCCCeEEEEEcCccCCCcchHHHHHHHHHhcCcEEEEeccC-CCCCccC
Q 025842 14 SPGSGCGAGTVQQLGG-----LNTYVTGSGPPDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVD 87 (247)
Q Consensus 14 ~~~~~~~~~~~~~~~~-----~~~~~~~p~~~~~~~~vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~~-~g~~~~~ 87 (247)
.+.| +..+.+..+++ ...++.... +...++|||+||+ +.+...|..+++.|+++||.|+++|++ +|.+. .
T Consensus 14 ~~~~-~~~~~~~~~~~~~~~~~~i~y~~~G-~~~~~~lvliHG~-~~~~~~w~~~~~~L~~~gy~vi~~Dl~G~G~S~-~ 89 (302)
T PRK00870 14 LPDY-PFAPHYVDVDDGDGGPLRMHYVDEG-PADGPPVLLLHGE-PSWSYLYRKMIPILAAAGHRVIAPDLIGFGRSD-K 89 (302)
T ss_pred CcCC-CCCceeEeecCCCCceEEEEEEecC-CCCCCEEEEECCC-CCchhhHHHHHHHHHhCCCEEEEECCCCCCCCC-C
Confidence 3344 55566777777 677766322 2235789999954 555678899999998889999999999 88765 2
Q ss_pred CCC-cccchHHHHhhcCCccccchHHHHHHHHHhcCCCeEEEEEecccHHHHHHhhcCC--CccEEEEecCCCC------
Q 025842 88 LNN-PQFDREAWRKIHNTDKGYVDAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLASSH--DIQAAVVLHPGAI------ 158 (247)
Q Consensus 88 ~~~-~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~~~~~------ 158 (247)
+.. ...+.. ..++|+.++++ +.+.+++.++|||+||.+++.+|..+ .+++++++++...
T Consensus 90 ~~~~~~~~~~---------~~a~~l~~~l~---~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~ 157 (302)
T PRK00870 90 PTRREDYTYA---------RHVEWMRSWFE---QLDLTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGLPTGDGPM 157 (302)
T ss_pred CCCcccCCHH---------HHHHHHHHHHH---HcCCCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCCCCccccc
Confidence 221 112222 22245544444 44667999999999999999988654 7888887764210
Q ss_pred -------------------------------C------------c------------------------------ccccc
Q 025842 159 -------------------------------T------------V------------------------------DDINE 165 (247)
Q Consensus 159 -------------------------------~------------~------------------------------~~~~~ 165 (247)
. . ..+.+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 237 (302)
T PRK00870 158 PDAFWAWRAFSQYSPVLPVGRLVNGGTVRDLSDAVRAAYDAPFPDESYKAGARAFPLLVPTSPDDPAVAANRAAWAVLER 237 (302)
T ss_pred hHHHhhhhcccccCchhhHHHHhhccccccCCHHHHHHhhcccCChhhhcchhhhhhcCCCCCCCcchHHHHHHHHhhhc
Confidence 0 0 01245
Q ss_pred ccccEEEeecCCCCCCCHHHHHHHHHHHHhccCCCeeEEEeCCCCccccccCCCCChHHHHHHHHHHHHHHHHHHHH
Q 025842 166 IKVPVAILGAEIDHVSPPEDLKRFGEILSAKLKNDCLVKIYPRVSHGWTVRYNVEDEFAVKSAEEAHEDMINWLTKY 242 (247)
Q Consensus 166 ~~~P~l~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~ 242 (247)
+++|+++++|++|+++|... +.+.+.++... ..++.++++++|..... ..+++.+.+.+||+++
T Consensus 238 i~~P~lii~G~~D~~~~~~~-~~~~~~~~~~~--~~~~~~i~~~gH~~~~e----------~p~~~~~~l~~fl~~~ 301 (302)
T PRK00870 238 WDKPFLTAFSDSDPITGGGD-AILQKRIPGAA--GQPHPTIKGAGHFLQED----------SGEELAEAVLEFIRAT 301 (302)
T ss_pred CCCceEEEecCCCCcccCch-HHHHhhccccc--ccceeeecCCCccchhh----------ChHHHHHHHHHHHhcC
Confidence 67899999999999999766 77777763111 23478999999987653 5678999999999764
No 17
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.90 E-value=6.4e-22 Score=159.92 Aligned_cols=194 Identities=18% Similarity=0.127 Sum_probs=138.1
Q ss_pred eEEeecCceEEEeecCCCCCCeEEEEEcCccCCCcchHHHHHHHHHhcCcEEEEeccC-CCCCccCCCCcccchHHHHhh
Q 025842 23 TVQQLGGLNTYVTGSGPPDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKI 101 (247)
Q Consensus 23 ~~~~~~~~~~~~~~p~~~~~~~~vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~~-~g~~~~~~~~~~~~~~~~~~~ 101 (247)
...++++...++.. .+.+.++|||+|| ++.+...|+.++..|+++ |+|+++|++ +|.|. .+...... ....
T Consensus 11 ~~~~~~~~~i~y~~--~G~~~~~vlllHG-~~~~~~~w~~~~~~L~~~-~~vi~~DlpG~G~S~-~~~~~~~~---~~~~ 82 (294)
T PLN02824 11 RTWRWKGYNIRYQR--AGTSGPALVLVHG-FGGNADHWRKNTPVLAKS-HRVYAIDLLGYGYSD-KPNPRSAP---PNSF 82 (294)
T ss_pred ceEEEcCeEEEEEE--cCCCCCeEEEECC-CCCChhHHHHHHHHHHhC-CeEEEEcCCCCCCCC-CCcccccc---cccc
Confidence 35678888887763 2223478999995 555667899999999876 799999998 77765 22111000 0011
Q ss_pred cCCccccchHHHHHHHHHhcCCCeEEEEEecccHHHHHHhhcCC--CccEEEEecCCCC---------------------
Q 025842 102 HNTDKGYVDAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLASSH--DIQAAVVLHPGAI--------------------- 158 (247)
Q Consensus 102 ~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~~~~~--------------------- 158 (247)
++.+...+|+.++++.+ +.+++.++||||||.+++.+|... +|+++|++++...
T Consensus 83 ~~~~~~a~~l~~~l~~l---~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (294)
T PLN02824 83 YTFETWGEQLNDFCSDV---VGDPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQPWLGRPFIKAFQNL 159 (294)
T ss_pred CCHHHHHHHHHHHHHHh---cCCCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCcccccccccchhhhHHHHHHHHH
Confidence 22233335666666554 567999999999999999988654 8999998775320
Q ss_pred ------------------------------------------------------------------CccccccccccEEE
Q 025842 159 ------------------------------------------------------------------TVDDINEIKVPVAI 172 (247)
Q Consensus 159 ------------------------------------------------------------------~~~~~~~~~~P~l~ 172 (247)
....+.++++|+|+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lv 239 (294)
T PLN02824 160 LRETAVGKAFFKSVATPETVKNILCQCYHDDSAVTDELVEAILRPGLEPGAVDVFLDFISYSGGPLPEELLPAVKCPVLI 239 (294)
T ss_pred HhchhHHHHHHHhhcCHHHHHHHHHHhccChhhccHHHHHHHHhccCCchHHHHHHHHhccccccchHHHHhhcCCCeEE
Confidence 00124457889999
Q ss_pred eecCCCCCCCHHHHHHHHHHHHhccCCCeeEEEeCCCCccccccCCCCChHHHHHHHHHHHHHHHHHHHH
Q 025842 173 LGAEIDHVSPPEDLKRFGEILSAKLKNDCLVKIYPRVSHGWTVRYNVEDEFAVKSAEEAHEDMINWLTKY 242 (247)
Q Consensus 173 i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~ 242 (247)
++|++|..+|.+.++.+.+.++ ..++++++++||..... .++++.+.+.+||+++
T Consensus 240 i~G~~D~~~~~~~~~~~~~~~~-----~~~~~~i~~~gH~~~~e----------~p~~~~~~i~~fl~~~ 294 (294)
T PLN02824 240 AWGEKDPWEPVELGRAYANFDA-----VEDFIVLPGVGHCPQDE----------APELVNPLIESFVARH 294 (294)
T ss_pred EEecCCCCCChHHHHHHHhcCC-----ccceEEeCCCCCChhhh----------CHHHHHHHHHHHHhcC
Confidence 9999999999988888666442 46899999999987663 5688999999999763
No 18
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.89 E-value=1.2e-21 Score=164.38 Aligned_cols=181 Identities=19% Similarity=0.213 Sum_probs=132.7
Q ss_pred ceEEEeecCCCCCCeEEEEEcCccCCC-cchHHHHHHHHHhcCcEEEEeccC-CCCCccCCCCcccchHHHHhhcCCccc
Q 025842 30 LNTYVTGSGPPDSKSAILLISDVFGYE-APLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKG 107 (247)
Q Consensus 30 ~~~~~~~p~~~~~~~~vv~~hgg~g~~-~~~~~~~a~~la~~G~~v~~~d~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (247)
+.+|++.|...++.| +|++|||++.. ...+..+++.|+++||.|+++|+| +|.+. ......+ .
T Consensus 181 l~g~l~~P~~~~~~P-~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~--~~~~~~d------------~ 245 (414)
T PRK05077 181 ITGFLHLPKGDGPFP-TVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSS--KWKLTQD------------S 245 (414)
T ss_pred EEEEEEECCCCCCcc-EEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCC--CCCcccc------------H
Confidence 889998876444444 55566676653 345777889999999999999998 66653 1100001 1
Q ss_pred cchHHHHHHHHHhc---CCCeEEEEEecccHHHHHHhhc-CC-CccEEEEecCCCCC-----------------------
Q 025842 108 YVDAKSVIAALKSK---GVSAIGAAGFCWGGVVAAKLAS-SH-DIQAAVVLHPGAIT----------------------- 159 (247)
Q Consensus 108 ~~d~~~~i~~l~~~---~~~~i~l~G~S~Gg~~a~~~a~-~~-~i~~~v~~~~~~~~----------------------- 159 (247)
.....++++++... +.++|+++|||+||.+++.+|. .+ +|+++|+++|....
T Consensus 246 ~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~~~~~~~~~~~p~~~~~~la~~l 325 (414)
T PRK05077 246 SLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVHTLLTDPKRQQQVPEMYLDVLASRL 325 (414)
T ss_pred HHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccchhhcchhhhhhchHHHHHHHHHHh
Confidence 12235778888776 6689999999999999999884 44 89999998875410
Q ss_pred ----c-----------------ccc-ccccccEEEeecCCCCCCCHHHHHHHHHHHHhccCCCeeEEEeCCCCccccccC
Q 025842 160 ----V-----------------DDI-NEIKVPVAILGAEIDHVSPPEDLKRFGEILSAKLKNDCLVKIYPRVSHGWTVRY 217 (247)
Q Consensus 160 ----~-----------------~~~-~~~~~P~l~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~H~~~~~~ 217 (247)
. ..+ .++++|+|+++|++|+++|.+.++.+.+..+ +.++++++++ |.+.
T Consensus 326 g~~~~~~~~l~~~l~~~sl~~~~~l~~~i~~PvLiI~G~~D~ivP~~~a~~l~~~~~-----~~~l~~i~~~-~~~e--- 396 (414)
T PRK05077 326 GMHDASDEALRVELNRYSLKVQGLLGRRCPTPMLSGYWKNDPFSPEEDSRLIASSSA-----DGKLLEIPFK-PVYR--- 396 (414)
T ss_pred CCCCCChHHHHHHhhhccchhhhhhccCCCCcEEEEecCCCCCCCHHHHHHHHHhCC-----CCeEEEccCC-CccC---
Confidence 0 001 3578999999999999999999998877663 6789999985 4332
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHHHh
Q 025842 218 NVEDEFAVKSAEEAHEDMINWLTKYV 243 (247)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~fl~~~~ 243 (247)
..+++.+.+.+||++++
T Consensus 397 ---------~~~~~~~~i~~wL~~~l 413 (414)
T PRK05077 397 ---------NFDKALQEISDWLEDRL 413 (414)
T ss_pred ---------CHHHHHHHHHHHHHHHh
Confidence 36899999999999886
No 19
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.89 E-value=9.3e-22 Score=157.56 Aligned_cols=189 Identities=15% Similarity=0.227 Sum_probs=137.6
Q ss_pred eEEeecCceEEEeecCCCCCCeEEEEEcCccCCCcchHHHHHHHHHhcCcEEEEeccC-CCCCccCCCCcccchHHHHhh
Q 025842 23 TVQQLGGLNTYVTGSGPPDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKI 101 (247)
Q Consensus 23 ~~~~~~~~~~~~~~p~~~~~~~~vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~~-~g~~~~~~~~~~~~~~~~~~~ 101 (247)
.+.++++...++.....+...++|||+|| ++.+...|..+++.|++ +|.|+++|++ +|.+. .+. ...++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~plvllHG-~~~~~~~w~~~~~~L~~-~~~vi~~Dl~G~G~S~-~~~-~~~~~------ 74 (276)
T TIGR02240 5 RTIDLDGQSIRTAVRPGKEGLTPLLIFNG-IGANLELVFPFIEALDP-DLEVIAFDVPGVGGSS-TPR-HPYRF------ 74 (276)
T ss_pred EEeccCCcEEEEEEecCCCCCCcEEEEeC-CCcchHHHHHHHHHhcc-CceEEEECCCCCCCCC-CCC-CcCcH------
Confidence 34567777776653222223478999995 56566788889998854 6999999999 88765 221 12222
Q ss_pred cCCccccchHHHHHHHHHhcCCCeEEEEEecccHHHHHHhhcCC--CccEEEEecCCCC---------------------
Q 025842 102 HNTDKGYVDAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLASSH--DIQAAVVLHPGAI--------------------- 158 (247)
Q Consensus 102 ~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~~~~~--------------------- 158 (247)
+...+|+.++++.+ +.+++.++||||||.+++.+|.+. +++++|++++...
T Consensus 75 ---~~~~~~~~~~i~~l---~~~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (276)
T TIGR02240 75 ---PGLAKLAARMLDYL---DYGQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVMVPGKPKVLMMMASPRRYI 148 (276)
T ss_pred ---HHHHHHHHHHHHHh---CcCceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCccccCCCchhHHHHhcCchhhh
Confidence 23336777777765 557899999999999999988654 7888777664320
Q ss_pred --------------------------------------------------CccccccccccEEEeecCCCCCCCHHHHHH
Q 025842 159 --------------------------------------------------TVDDINEIKVPVAILGAEIDHVSPPEDLKR 188 (247)
Q Consensus 159 --------------------------------------------------~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~ 188 (247)
....+.++++|+|+++|++|+++|.+..+.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~v~~~~~~~ 228 (276)
T TIGR02240 149 QPSHGIHIAPDIYGGAFRRDPELAMAHASKVRSGGKLGYYWQLFAGLGWTSIHWLHKIQQPTLVLAGDDDPIIPLINMRL 228 (276)
T ss_pred ccccccchhhhhccceeeccchhhhhhhhhcccCCCchHHHHHHHHcCCchhhHhhcCCCCEEEEEeCCCCcCCHHHHHH
Confidence 001245778999999999999999999999
Q ss_pred HHHHHHhccCCCeeEEEeCCCCccccccCCCCChHHHHHHHHHHHHHHHHHHHHh
Q 025842 189 FGEILSAKLKNDCLVKIYPRVSHGWTVRYNVEDEFAVKSAEEAHEDMINWLTKYV 243 (247)
Q Consensus 189 ~~~~l~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~ 243 (247)
+.+.++ ..+++++++ +|..... ..+++.+.+.+|+++.-
T Consensus 229 l~~~~~-----~~~~~~i~~-gH~~~~e----------~p~~~~~~i~~fl~~~~ 267 (276)
T TIGR02240 229 LAWRIP-----NAELHIIDD-GHLFLIT----------RAEAVAPIIMKFLAEER 267 (276)
T ss_pred HHHhCC-----CCEEEEEcC-CCchhhc----------cHHHHHHHHHHHHHHhh
Confidence 988874 567888886 9986653 56789999999998754
No 20
>PRK11460 putative hydrolase; Provisional
Probab=99.89 E-value=9.8e-22 Score=153.05 Aligned_cols=183 Identities=13% Similarity=0.087 Sum_probs=124.2
Q ss_pred CCCCeEEEEEcCccCCCcchHHHHHHHHHhcCcEEEEeccC-CCCCccCCCCcccchHHHHhhc--CC-------ccccc
Q 025842 40 PDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIH--NT-------DKGYV 109 (247)
Q Consensus 40 ~~~~~~vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~~-~g~~~~~~~~~~~~~~~~~~~~--~~-------~~~~~ 109 (247)
..+.+.||++| |+|.+...+..+++.|+..++.+..+..+ ..... .. ....|+... .. .....
T Consensus 13 ~~~~~~vIlLH-G~G~~~~~~~~l~~~l~~~~~~~~~i~~~g~~~~~-~~-----~g~~W~~~~~~~~~~~~~~~~~~~~ 85 (232)
T PRK11460 13 KPAQQLLLLFH-GVGDNPVAMGEIGSWFAPAFPDALVVSVGGPEPSG-NG-----AGRQWFSVQGITEDNRQARVAAIMP 85 (232)
T ss_pred CCCCcEEEEEe-CCCCChHHHHHHHHHHHHHCCCCEEECCCCCCCcC-CC-----CCcccccCCCCCccchHHHHHHHHH
Confidence 44567899999 66667788899999998876544444442 11100 00 001222110 00 11112
Q ss_pred hHHHHHHHHHhc---CCCeEEEEEecccHHHHHHhhc-CC-CccEEEEecCCCCCccccccccccEEEeecCCCCCCCHH
Q 025842 110 DAKSVIAALKSK---GVSAIGAAGFCWGGVVAAKLAS-SH-DIQAAVVLHPGAITVDDINEIKVPVAILGAEIDHVSPPE 184 (247)
Q Consensus 110 d~~~~i~~l~~~---~~~~i~l~G~S~Gg~~a~~~a~-~~-~i~~~v~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~ 184 (247)
.+.+.++++.+. +.++|+++|||+||.+++.++. .+ .+.+++++++............+|++++||++|+++|.+
T Consensus 86 ~l~~~i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~~~~~~~~~~~pvli~hG~~D~vvp~~ 165 (232)
T PRK11460 86 TFIETVRYWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYASLPETAPTATTIHLIHGGEDPVIDVA 165 (232)
T ss_pred HHHHHHHHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEeccccccccccccCCCcEEEEecCCCCccCHH
Confidence 333444554433 4569999999999999999774 44 456677888765433333345789999999999999999
Q ss_pred HHHHHHHHHHhccCCCeeEEEeCCCCccccccCCCCChHHHHHHHHHHHHHHHHHHHHhc
Q 025842 185 DLKRFGEILSAKLKNDCLVKIYPRVSHGWTVRYNVEDEFAVKSAEEAHEDMINWLTKYVK 244 (247)
Q Consensus 185 ~~~~~~~~l~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~ 244 (247)
.++++.+.+ ++.+.+++++.|++++|.+. .+..+.+.+||.+.+.
T Consensus 166 ~~~~~~~~L-~~~g~~~~~~~~~~~gH~i~--------------~~~~~~~~~~l~~~l~ 210 (232)
T PRK11460 166 HAVAAQEAL-ISLGGDVTLDIVEDLGHAID--------------PRLMQFALDRLRYTVP 210 (232)
T ss_pred HHHHHHHHH-HHCCCCeEEEEECCCCCCCC--------------HHHHHHHHHHHHHHcc
Confidence 999999999 56677899999999999973 3677788888877763
No 21
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.88 E-value=2e-21 Score=155.98 Aligned_cols=179 Identities=15% Similarity=0.192 Sum_probs=124.7
Q ss_pred ceEEEeecCCCCCCeEEEEEcCccCCCcchHH---HHHHHHHhcCcEEEEeccC-CCCCccCCCCcccchHHHHhhcCCc
Q 025842 30 LNTYVTGSGPPDSKSAILLISDVFGYEAPLFR---KLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTD 105 (247)
Q Consensus 30 ~~~~~~~p~~~~~~~~vv~~hgg~g~~~~~~~---~~a~~la~~G~~v~~~d~~-~g~~~~~~~~~~~~~~~~~~~~~~~ 105 (247)
...++.. .+..++||++|| ++.+...|. ..+..|++.||.|+++|+| +|.|. .+...... . .
T Consensus 20 ~~~~y~~---~g~~~~ivllHG-~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~-~~~~~~~~--------~-~ 85 (282)
T TIGR03343 20 FRIHYNE---AGNGEAVIMLHG-GGPGAGGWSNYYRNIGPFVDAGYRVILKDSPGFNKSD-AVVMDEQR--------G-L 85 (282)
T ss_pred eeEEEEe---cCCCCeEEEECC-CCCchhhHHHHHHHHHHHHhCCCEEEEECCCCCCCCC-CCcCcccc--------c-c
Confidence 4455442 234578999995 454434443 3345677789999999998 77765 22111000 0 0
Q ss_pred cccchHHHHHHHHHhcCCCeEEEEEecccHHHHHHhhcCC--CccEEEEecCCCC-------------------------
Q 025842 106 KGYVDAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLASSH--DIQAAVVLHPGAI------------------------- 158 (247)
Q Consensus 106 ~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~~~~~------------------------- 158 (247)
...+|+.+++ ...+.++++++||||||.+++.++... +++++|++++...
T Consensus 86 ~~~~~l~~~l---~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (282)
T TIGR03343 86 VNARAVKGLM---DALDIEKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPSLFAPMPMEGIKLLFKLYAEPSY 162 (282)
T ss_pred hhHHHHHHHH---HHcCCCCeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCCccccccCchHHHHHHHHHhcCCCH
Confidence 1124444444 444778999999999999999988654 8888888765210
Q ss_pred -------------C---------------------------------------ccccccccccEEEeecCCCCCCCHHHH
Q 025842 159 -------------T---------------------------------------VDDINEIKVPVAILGAEIDHVSPPEDL 186 (247)
Q Consensus 159 -------------~---------------------------------------~~~~~~~~~P~l~i~g~~D~~~~~~~~ 186 (247)
. ...++++++|+|+++|++|++++.+.+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlli~G~~D~~v~~~~~ 242 (282)
T TIGR03343 163 ETLKQMLNVFLFDQSLITEELLQGRWENIQRQPEHLKNFLISSQKAPLSTWDVTARLGEIKAKTLVTWGRDDRFVPLDHG 242 (282)
T ss_pred HHHHHHHhhCccCcccCcHHHHHhHHHHhhcCHHHHHHHHHhccccccccchHHHHHhhCCCCEEEEEccCCCcCCchhH
Confidence 0 001346789999999999999999999
Q ss_pred HHHHHHHHhccCCCeeEEEeCCCCccccccCCCCChHHHHHHHHHHHHHHHHHH
Q 025842 187 KRFGEILSAKLKNDCLVKIYPRVSHGWTVRYNVEDEFAVKSAEEAHEDMINWLT 240 (247)
Q Consensus 187 ~~~~~~l~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~ 240 (247)
+.+.+.++ ++++++++++||..... .++.+.+.+.+||+
T Consensus 243 ~~~~~~~~-----~~~~~~i~~agH~~~~e----------~p~~~~~~i~~fl~ 281 (282)
T TIGR03343 243 LKLLWNMP-----DAQLHVFSRCGHWAQWE----------HADAFNRLVIDFLR 281 (282)
T ss_pred HHHHHhCC-----CCEEEEeCCCCcCCccc----------CHHHHHHHHHHHhh
Confidence 98888874 78899999999997663 56788899999986
No 22
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.88 E-value=1.4e-21 Score=141.33 Aligned_cols=141 Identities=29% Similarity=0.437 Sum_probs=113.5
Q ss_pred EEEEEcCccCCCcchHHHHHHHHHhcCcEEEEeccC-CCCCccCCCCcccchHHHHhhcCCccccchHHHHHHHHHh--c
Q 025842 45 AILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKS--K 121 (247)
Q Consensus 45 ~vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~--~ 121 (247)
+||++||+.+ +...+..+++.|+++||.|+.+|++ ++.+. . ..++..+++.+.. .
T Consensus 1 ~vv~~HG~~~-~~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~-------------~--------~~~~~~~~~~~~~~~~ 58 (145)
T PF12695_consen 1 VVVLLHGWGG-SRRDYQPLAEALAEQGYAVVAFDYPGHGDSD-------------G--------ADAVERVLADIRAGYP 58 (145)
T ss_dssp EEEEECTTTT-TTHHHHHHHHHHHHTTEEEEEESCTTSTTSH-------------H--------SHHHHHHHHHHHHHHC
T ss_pred CEEEECCCCC-CHHHHHHHHHHHHHCCCEEEEEecCCCCccc-------------h--------hHHHHHHHHHHHhhcC
Confidence 5889995555 5677899999999999999999996 44321 0 1355666666522 3
Q ss_pred CCCeEEEEEecccHHHHHHhhcC-CCccEEEEecCCCCCccccccccccEEEeecCCCCCCCHHHHHHHHHHHHhccCCC
Q 025842 122 GVSAIGAAGFCWGGVVAAKLASS-HDIQAAVVLHPGAITVDDINEIKVPVAILGAEIDHVSPPEDLKRFGEILSAKLKND 200 (247)
Q Consensus 122 ~~~~i~l~G~S~Gg~~a~~~a~~-~~i~~~v~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~l~~~~~~~ 200 (247)
+.++|+++|||+||.+++.++.. ++++++|+++|.. ..+.+...+.|+++++|++|.+++.+..+++++.++ . +
T Consensus 59 ~~~~i~l~G~S~Gg~~a~~~~~~~~~v~~~v~~~~~~-~~~~~~~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~-~---~ 133 (145)
T PF12695_consen 59 DPDRIILIGHSMGGAIAANLAARNPRVKAVVLLSPYP-DSEDLAKIRIPVLFIHGENDPLVPPEQVRRLYEALP-G---P 133 (145)
T ss_dssp TCCEEEEEEETHHHHHHHHHHHHSTTESEEEEESESS-GCHHHTTTTSEEEEEEETT-SSSHHHHHHHHHHHHC-S---S
T ss_pred CCCcEEEEEEccCcHHHHHHhhhccceeEEEEecCcc-chhhhhccCCcEEEEEECCCCcCCHHHHHHHHHHcC-C---C
Confidence 77899999999999999998855 6999999999953 366788889999999999999999999999999984 2 7
Q ss_pred eeEEEeCCCCcc
Q 025842 201 CLVKIYPRVSHG 212 (247)
Q Consensus 201 ~~~~~~~~~~H~ 212 (247)
.++++++|++|+
T Consensus 134 ~~~~~i~g~~H~ 145 (145)
T PF12695_consen 134 KELYIIPGAGHF 145 (145)
T ss_dssp EEEEEETTS-TT
T ss_pred cEEEEeCCCcCc
Confidence 899999999995
No 23
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.88 E-value=5.3e-21 Score=150.77 Aligned_cols=170 Identities=19% Similarity=0.291 Sum_probs=123.6
Q ss_pred CCCeEEEEEcCccCCCcchHHHHHHHHHhcCcEEEEeccC-CCCCccCCCCcccchHHHHhhcCCccccchHHHHHHHHH
Q 025842 41 DSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALK 119 (247)
Q Consensus 41 ~~~~~vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~ 119 (247)
.+.|+||++||+ +.+...|..++..|. ++|.|+++|++ +|.+. .+.....+...+ .+++.++++.+
T Consensus 11 ~~~~~iv~lhG~-~~~~~~~~~~~~~l~-~~~~vi~~D~~G~G~S~-~~~~~~~~~~~~---------~~~~~~~i~~~- 77 (257)
T TIGR03611 11 ADAPVVVLSSGL-GGSGSYWAPQLDVLT-QRFHVVTYDHRGTGRSP-GELPPGYSIAHM---------ADDVLQLLDAL- 77 (257)
T ss_pred CCCCEEEEEcCC-CcchhHHHHHHHHHH-hccEEEEEcCCCCCCCC-CCCcccCCHHHH---------HHHHHHHHHHh-
Confidence 346789999955 555677888888885 57999999998 77765 222222222222 25555555544
Q ss_pred hcCCCeEEEEEecccHHHHHHhhcCC--CccEEEEecCCCCC--------------------------------------
Q 025842 120 SKGVSAIGAAGFCWGGVVAAKLASSH--DIQAAVVLHPGAIT-------------------------------------- 159 (247)
Q Consensus 120 ~~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~~~~~~-------------------------------------- 159 (247)
+..++.++|||+||.+++.++... .++++|++++....
T Consensus 78 --~~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (257)
T TIGR03611 78 --NIERFHFVGHALGGLIGLQLALRYPERLLSLVLINAWSRPDPHTRRCFDVRIALLQHAGPEAYVHAQALFLYPADWIS 155 (257)
T ss_pred --CCCcEEEEEechhHHHHHHHHHHChHHhHHheeecCCCCCChhHHHHHHHHHHHHhccCcchhhhhhhhhhccccHhh
Confidence 667899999999999999988544 68888877652200
Q ss_pred -----------------------------------ccccccccccEEEeecCCCCCCCHHHHHHHHHHHHhccCCCeeEE
Q 025842 160 -----------------------------------VDDINEIKVPVAILGAEIDHVSPPEDLKRFGEILSAKLKNDCLVK 204 (247)
Q Consensus 160 -----------------------------------~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~ 204 (247)
...+..+++|+++++|++|.++|.+.++.+.+.++ +.+++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~-----~~~~~ 230 (257)
T TIGR03611 156 ENAARLAADEAHALAHFPGKANVLRRINALEAFDVSARLDRIQHPVLLIANRDDMLVPYTQSLRLAAALP-----NAQLK 230 (257)
T ss_pred ccchhhhhhhhhcccccCccHHHHHHHHHHHcCCcHHHhcccCccEEEEecCcCcccCHHHHHHHHHhcC-----CceEE
Confidence 01234578999999999999999999998888773 56888
Q ss_pred EeCCCCccccccCCCCChHHHHHHHHHHHHHHHHHH
Q 025842 205 IYPRVSHGWTVRYNVEDEFAVKSAEEAHEDMINWLT 240 (247)
Q Consensus 205 ~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~ 240 (247)
.++++||.+... .+++..+.+.+||+
T Consensus 231 ~~~~~gH~~~~~----------~~~~~~~~i~~fl~ 256 (257)
T TIGR03611 231 LLPYGGHASNVT----------DPETFNRALLDFLK 256 (257)
T ss_pred EECCCCCCcccc----------CHHHHHHHHHHHhc
Confidence 999999987653 45788889999985
No 24
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.87 E-value=1.1e-20 Score=149.48 Aligned_cols=172 Identities=14% Similarity=0.155 Sum_probs=127.5
Q ss_pred CCCCCCeEEEEEcCccCCCcchHHHHHHHHHhcCcEEEEeccC-CCCCccCCCCcccchHHHHhhcCCccccchHHHHHH
Q 025842 38 GPPDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIA 116 (247)
Q Consensus 38 ~~~~~~~~vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~ 116 (247)
.+...+++||++||..+ +...|..++..|+ ++|.|+++|+| +|.+. .+. ..++.. ..+|+.++++
T Consensus 11 ~~~~~~~~iv~lhG~~~-~~~~~~~~~~~l~-~~~~vi~~D~~G~G~s~-~~~--~~~~~~---------~~~d~~~~l~ 76 (255)
T PRK10673 11 QNPHNNSPIVLVHGLFG-SLDNLGVLARDLV-NDHDIIQVDMRNHGLSP-RDP--VMNYPA---------MAQDLLDTLD 76 (255)
T ss_pred CCCCCCCCEEEECCCCC-chhHHHHHHHHHh-hCCeEEEECCCCCCCCC-CCC--CCCHHH---------HHHHHHHHHH
Confidence 34446789999996655 4567888888885 46999999998 77655 221 223332 3367777776
Q ss_pred HHHhcCCCeEEEEEecccHHHHHHhhcCC--CccEEEEecCCCCC-----------------------------------
Q 025842 117 ALKSKGVSAIGAAGFCWGGVVAAKLASSH--DIQAAVVLHPGAIT----------------------------------- 159 (247)
Q Consensus 117 ~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~~~~~~----------------------------------- 159 (247)
.+ +.+++.++||||||.+++.+|... .|++++++++....
T Consensus 77 ~l---~~~~~~lvGhS~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (255)
T PRK10673 77 AL---QIEKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSEAGATTRQQAAAIMRQHL 153 (255)
T ss_pred Hc---CCCceEEEEECHHHHHHHHHHHhCHhhcceEEEEecCCCCccchhhHHHHHHHHHhhhcccccHHHHHHHHHHhc
Confidence 65 556899999999999999988554 79999987532100
Q ss_pred ----------------------------------ccccccccccEEEeecCCCCCCCHHHHHHHHHHHHhccCCCeeEEE
Q 025842 160 ----------------------------------VDDINEIKVPVAILGAEIDHVSPPEDLKRFGEILSAKLKNDCLVKI 205 (247)
Q Consensus 160 ----------------------------------~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~ 205 (247)
.+.++.+++|+|+++|++|+.++.+..+.+.+.++ +.++.+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~-----~~~~~~ 228 (255)
T PRK10673 154 NEEGVIQFLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWPHPALFIRGGNSPYVTEAYRDDLLAQFP-----QARAHV 228 (255)
T ss_pred CCHHHHHHHHhcCCcceeEeeHHHHHHhHHHHhCCcccCCCCCCeEEEECCCCCCCCHHHHHHHHHhCC-----CcEEEE
Confidence 00123456899999999999999988888888764 678999
Q ss_pred eCCCCccccccCCCCChHHHHHHHHHHHHHHHHHHH
Q 025842 206 YPRVSHGWTVRYNVEDEFAVKSAEEAHEDMINWLTK 241 (247)
Q Consensus 206 ~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~ 241 (247)
+++++|.+... ..+++.+.+.+||.+
T Consensus 229 ~~~~gH~~~~~----------~p~~~~~~l~~fl~~ 254 (255)
T PRK10673 229 IAGAGHWVHAE----------KPDAVLRAIRRYLND 254 (255)
T ss_pred eCCCCCeeecc----------CHHHHHHHHHHHHhc
Confidence 99999987653 467899999999975
No 25
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.87 E-value=2.2e-20 Score=149.34 Aligned_cols=188 Identities=22% Similarity=0.298 Sum_probs=134.1
Q ss_pred ceEEeecCceEEEeecCCCCCCeEEEEEcCccCCCcchHHHHHHHHHhcCcEEEEeccC-CCCCccCCCCcccchHHHHh
Q 025842 22 GTVQQLGGLNTYVTGSGPPDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRK 100 (247)
Q Consensus 22 ~~~~~~~~~~~~~~~p~~~~~~~~vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~~-~g~~~~~~~~~~~~~~~~~~ 100 (247)
..+.+++++..++....+ ...++||++||. +.+...|..+.+.|++ +|.|+++|++ +|.+. .+.....++.
T Consensus 8 ~~~~~~~~~~~~~~~~g~-~~~~~vv~~hG~-~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~-~~~~~~~~~~---- 79 (278)
T TIGR03056 8 SRRVTVGPFHWHVQDMGP-TAGPLLLLLHGT-GASTHSWRDLMPPLAR-SFRVVAPDLPGHGFTR-APFRFRFTLP---- 79 (278)
T ss_pred cceeeECCEEEEEEecCC-CCCCeEEEEcCC-CCCHHHHHHHHHHHhh-CcEEEeecCCCCCCCC-CccccCCCHH----
Confidence 445688998888774322 235789999954 5556778888988865 6999999998 77765 2222122222
Q ss_pred hcCCccccchHHHHHHHHHhcCCCeEEEEEecccHHHHHHhhcCC--CccEEEEecCCCCC-------------------
Q 025842 101 IHNTDKGYVDAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLASSH--DIQAAVVLHPGAIT------------------- 159 (247)
Q Consensus 101 ~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~~~~~~------------------- 159 (247)
...+|+.++++. .+.++++++|||+||.+++.++... ++++++++++....
T Consensus 80 -----~~~~~l~~~i~~---~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (278)
T TIGR03056 80 -----SMAEDLSALCAA---EGLSPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPFEGMAGTLFPYMARVLACN 151 (278)
T ss_pred -----HHHHHHHHHHHH---cCCCCceEEEECccHHHHHHHHHhCCcccceEEEEcCcccccccccccccchhhHhhhhc
Confidence 223555555544 3557899999999999999988554 57777766542100
Q ss_pred -------------------------------------------------------------ccccccccccEEEeecCCC
Q 025842 160 -------------------------------------------------------------VDDINEIKVPVAILGAEID 178 (247)
Q Consensus 160 -------------------------------------------------------------~~~~~~~~~P~l~i~g~~D 178 (247)
...++++++|+++++|++|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~g~~D 231 (278)
T TIGR03056 152 PFTPPMMSRGAADQQRVERLIRDTGSLLDKAGMTYYGRLIRSPAHVDGALSMMAQWDLAPLNRDLPRITIPLHLIAGEED 231 (278)
T ss_pred ccchHHHHhhcccCcchhHHhhccccccccchhhHHHHhhcCchhhhHHHHHhhcccccchhhhcccCCCCEEEEEeCCC
Confidence 0013346789999999999
Q ss_pred CCCCHHHHHHHHHHHHhccCCCeeEEEeCCCCccccccCCCCChHHHHHHHHHHHHHHHHHH
Q 025842 179 HVSPPEDLKRFGEILSAKLKNDCLVKIYPRVSHGWTVRYNVEDEFAVKSAEEAHEDMINWLT 240 (247)
Q Consensus 179 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~ 240 (247)
.++|.+..+.+.+.++ +.++..++++||.+... ..++..+.+.+||+
T Consensus 232 ~~vp~~~~~~~~~~~~-----~~~~~~~~~~gH~~~~e----------~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 232 KAVPPDESKRAATRVP-----TATLHVVPGGGHLVHEE----------QADGVVGLILQAAE 278 (278)
T ss_pred cccCHHHHHHHHHhcc-----CCeEEEECCCCCccccc----------CHHHHHHHHHHHhC
Confidence 9999998888887763 57899999999987653 46788999998873
No 26
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.87 E-value=2.3e-20 Score=150.92 Aligned_cols=189 Identities=15% Similarity=0.221 Sum_probs=135.8
Q ss_pred ceEEeecCceEEEeecCCCCCCeEEEEEcCccCCCcchHHHHHHHHHhcCcEEEEeccC-CCCCccCCCCcccchHHHHh
Q 025842 22 GTVQQLGGLNTYVTGSGPPDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRK 100 (247)
Q Consensus 22 ~~~~~~~~~~~~~~~p~~~~~~~~vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~~-~g~~~~~~~~~~~~~~~~~~ 100 (247)
....+.++...++... +..++|||+||. +.+...|+.+++.|++++ .|+++|++ +|.|. .+. ...+...
T Consensus 9 ~~~~~~~g~~i~y~~~---G~g~~vvllHG~-~~~~~~w~~~~~~L~~~~-~via~D~~G~G~S~-~~~-~~~~~~~--- 78 (295)
T PRK03592 9 MRRVEVLGSRMAYIET---GEGDPIVFLHGN-PTSSYLWRNIIPHLAGLG-RCLAPDLIGMGASD-KPD-IDYTFAD--- 78 (295)
T ss_pred ceEEEECCEEEEEEEe---CCCCEEEEECCC-CCCHHHHHHHHHHHhhCC-EEEEEcCCCCCCCC-CCC-CCCCHHH---
Confidence 3456778888777642 245789999954 555678899999998875 99999999 78765 232 2223332
Q ss_pred hcCCccccchHHHHHHHHHhcCCCeEEEEEecccHHHHHHhhcCC--CccEEEEecCCCC--------------------
Q 025842 101 IHNTDKGYVDAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLASSH--DIQAAVVLHPGAI-------------------- 158 (247)
Q Consensus 101 ~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~~~~~-------------------- 158 (247)
.++|+.++++.+ +.+++.++|||+||.+++.++..+ +++++|++++...
T Consensus 79 ------~a~dl~~ll~~l---~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (295)
T PRK03592 79 ------HARYLDAWFDAL---GLDDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRPMTWDDFPPAVRELFQALRS 149 (295)
T ss_pred ------HHHHHHHHHHHh---CCCCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCCCCcchhhcchhHHHHHHHHhC
Confidence 235666665554 667999999999999999988554 8999998775210
Q ss_pred ----C------------------------------------------------------------------ccccccccc
Q 025842 159 ----T------------------------------------------------------------------VDDINEIKV 168 (247)
Q Consensus 159 ----~------------------------------------------------------------------~~~~~~~~~ 168 (247)
. ...+.++++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 229 (295)
T PRK03592 150 PGEGEEMVLEENVFIERVLPGSILRPLSDEEMAVYRRPFPTPESRRPTLSWPRELPIDGEPADVVALVEEYAQWLATSDV 229 (295)
T ss_pred cccccccccchhhHHhhcccCcccccCCHHHHHHHHhhcCCchhhhhhhhhhhhcCCCCcchhhHhhhhHhHHHhccCCC
Confidence 0 000234688
Q ss_pred cEEEeecCCCCCCCHHHHHHHHHH-HHhccCCCeeEEEeCCCCccccccCCCCChHHHHHHHHHHHHHHHHHHHHhc
Q 025842 169 PVAILGAEIDHVSPPEDLKRFGEI-LSAKLKNDCLVKIYPRVSHGWTVRYNVEDEFAVKSAEEAHEDMINWLTKYVK 244 (247)
Q Consensus 169 P~l~i~g~~D~~~~~~~~~~~~~~-l~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~ 244 (247)
|+|+++|++|..++.....++... ++ +.++++++++||..... .++++.+.+.+|+++...
T Consensus 230 P~lii~G~~D~~~~~~~~~~~~~~~~~-----~~~~~~i~~~gH~~~~e----------~p~~v~~~i~~fl~~~~~ 291 (295)
T PRK03592 230 PKLLINAEPGAILTTGAIRDWCRSWPN-----QLEITVFGAGLHFAQED----------SPEEIGAAIAAWLRRLRL 291 (295)
T ss_pred CeEEEeccCCcccCcHHHHHHHHHhhh-----hcceeeccCcchhhhhc----------CHHHHHHHHHHHHHHhcc
Confidence 999999999999955555555443 42 57899999999987763 468899999999987643
No 27
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.87 E-value=3.4e-20 Score=148.41 Aligned_cols=188 Identities=19% Similarity=0.290 Sum_probs=128.4
Q ss_pred EEeecCceEEEeecCCCCCCeEEEEEcCccCCCcchHHHHHHHHHhcCcEEEEeccC-CCCCccCCCCcc--cchHHHHh
Q 025842 24 VQQLGGLNTYVTGSGPPDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQ--FDREAWRK 100 (247)
Q Consensus 24 ~~~~~~~~~~~~~p~~~~~~~~vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~~-~g~~~~~~~~~~--~~~~~~~~ 100 (247)
+.+.++...++......+++++||++||+.|.+...+..+...+.+.||.|+++|++ +|.+. .+.... .+...
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~-~~~~~~~~~~~~~--- 81 (288)
T TIGR01250 6 IITVDGGYHLFTKTGGEGEKIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSD-QPDDSDELWTIDY--- 81 (288)
T ss_pred eecCCCCeEEEEeccCCCCCCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCC-CCCcccccccHHH---
Confidence 345555555555433344568899999887776556666777776669999999998 77654 222111 22222
Q ss_pred hcCCccccchHHHHHHHHHhcCCCeEEEEEecccHHHHHHhhcCC--CccEEEEecCCCCC-------------------
Q 025842 101 IHNTDKGYVDAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLASSH--DIQAAVVLHPGAIT------------------- 159 (247)
Q Consensus 101 ~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~~~~~~------------------- 159 (247)
..+|+.++++. .+..+++++|||+||.+++.++... .++++++.++....
T Consensus 82 ------~~~~~~~~~~~---~~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (288)
T TIGR01250 82 ------FVDELEEVREK---LGLDKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLDSAPEYVKELNRLRKELPPEVR 152 (288)
T ss_pred ------HHHHHHHHHHH---cCCCcEEEEEeehHHHHHHHHHHhCccccceeeEecccccchHHHHHHHHHHhhcChhHH
Confidence 22455554443 3566899999999999999988543 78888876653200
Q ss_pred -----------------------------------------------------------------------ccccccccc
Q 025842 160 -----------------------------------------------------------------------VDDINEIKV 168 (247)
Q Consensus 160 -----------------------------------------------------------------------~~~~~~~~~ 168 (247)
...+.++++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 232 (288)
T TIGR01250 153 AAIKRCEASGDYDNPEYQEAVEVFYHHLLCRTRKWPEALKHLKSGMNTNVYNIMQGPNEFTITGNLKDWDITDKLSEIKV 232 (288)
T ss_pred HHHHHHHhccCcchHHHHHHHHHHHHHhhcccccchHHHHHHhhccCHHHHhcccCCccccccccccccCHHHHhhccCC
Confidence 001235789
Q ss_pred cEEEeecCCCCCCCHHHHHHHHHHHHhccCCCeeEEEeCCCCccccccCCCCChHHHHHHHHHHHHHHHHHH
Q 025842 169 PVAILGAEIDHVSPPEDLKRFGEILSAKLKNDCLVKIYPRVSHGWTVRYNVEDEFAVKSAEEAHEDMINWLT 240 (247)
Q Consensus 169 P~l~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~ 240 (247)
|+++++|++|.+ +.+..+.+.+.++ ..+++++++++|..... .++++.+.+.+||+
T Consensus 233 P~lii~G~~D~~-~~~~~~~~~~~~~-----~~~~~~~~~~gH~~~~e----------~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 233 PTLLTVGEFDTM-TPEAAREMQELIA-----GSRLVVFPDGSHMTMIE----------DPEVYFKLLSDFIR 288 (288)
T ss_pred CEEEEecCCCcc-CHHHHHHHHHhcc-----CCeEEEeCCCCCCcccC----------CHHHHHHHHHHHhC
Confidence 999999999985 5677777777663 56899999999987664 45788888888873
No 28
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.86 E-value=2.8e-20 Score=154.25 Aligned_cols=193 Identities=19% Similarity=0.257 Sum_probs=129.9
Q ss_pred ceEEeecCc-eEEEeecCCCC----CCeEEEEEcCccCCCcchHHHHHHHHHhcCcEEEEeccC-CCCCccCCCCcccch
Q 025842 22 GTVQQLGGL-NTYVTGSGPPD----SKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDR 95 (247)
Q Consensus 22 ~~~~~~~~~-~~~~~~p~~~~----~~~~vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~~-~g~~~~~~~~~~~~~ 95 (247)
++...+++. ..++.... .+ ..++|||+|| ++.+...|..++..|++ +|.|+++|++ +|.+. .+.....+.
T Consensus 63 ~~~~~~~g~~~i~Y~~~G-~g~~~~~gp~lvllHG-~~~~~~~w~~~~~~L~~-~~~via~Dl~G~G~S~-~~~~~~~~~ 138 (360)
T PLN02679 63 CKKWKWKGEYSINYLVKG-SPEVTSSGPPVLLVHG-FGASIPHWRRNIGVLAK-NYTVYAIDLLGFGASD-KPPGFSYTM 138 (360)
T ss_pred CceEEECCceeEEEEEec-CcccCCCCCeEEEECC-CCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCC-CCCCccccH
Confidence 344455555 66665322 12 2478999995 55556788889998865 7999999999 88765 232222333
Q ss_pred HHHHhhcCCccccchHHHHHHHHHhcCCCeEEEEEecccHHHHHHhhc-C-C-CccEEEEecCCCC--------------
Q 025842 96 EAWRKIHNTDKGYVDAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLAS-S-H-DIQAAVVLHPGAI-------------- 158 (247)
Q Consensus 96 ~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~-~-~-~i~~~v~~~~~~~-------------- 158 (247)
..|. +++.++++. .+.+++.++|||+||.+++.++. . + +|+++|++++...
T Consensus 139 ~~~a---------~~l~~~l~~---l~~~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~~~~~~~~~ 206 (360)
T PLN02679 139 ETWA---------ELILDFLEE---VVQKPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNKAVVDDWRIKL 206 (360)
T ss_pred HHHH---------HHHHHHHHH---hcCCCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCccccccccccchHHHhh
Confidence 3332 555555554 46679999999999999998764 3 3 7888887764210
Q ss_pred ----------------------------------------C-------------------------------------cc
Q 025842 159 ----------------------------------------T-------------------------------------VD 161 (247)
Q Consensus 159 ----------------------------------------~-------------------------------------~~ 161 (247)
. ..
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (360)
T PLN02679 207 LLPLLWLIDFLLKQRGIASALFNRVKQRDNLKNILLSVYGNKEAVDDELVEIIRGPADDEGALDAFVSIVTGPPGPNPIK 286 (360)
T ss_pred hcchHHHHHHHhhchhhHHHHHHHhcCHHHHHHHHHHhccCcccCCHHHHHHHHhhccCCChHHHHHHHHhcCCCCCHHH
Confidence 0 01
Q ss_pred ccccccccEEEeecCCCCCCCHHHH-HHHHHHHHhccCCCeeEEEeCCCCccccccCCCCChHHHHHHHHHHHHHHHHHH
Q 025842 162 DINEIKVPVAILGAEIDHVSPPEDL-KRFGEILSAKLKNDCLVKIYPRVSHGWTVRYNVEDEFAVKSAEEAHEDMINWLT 240 (247)
Q Consensus 162 ~~~~~~~P~l~i~g~~D~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~ 240 (247)
.+.++++|+|+++|++|+++|.+.. ..+.+.+ .+.-.+.++++++++||..... .++++.+.+.+||+
T Consensus 287 ~l~~i~~PtLii~G~~D~~~p~~~~~~~~~~~l-~~~ip~~~l~~i~~aGH~~~~E----------~Pe~~~~~I~~FL~ 355 (360)
T PLN02679 287 LIPRISLPILVLWGDQDPFTPLDGPVGKYFSSL-PSQLPNVTLYVLEGVGHCPHDD----------RPDLVHEKLLPWLA 355 (360)
T ss_pred HhhhcCCCEEEEEeCCCCCcCchhhHHHHHHhh-hccCCceEEEEcCCCCCCcccc----------CHHHHHHHHHHHHH
Confidence 1345678999999999999987642 2222333 1111267899999999986653 57899999999997
Q ss_pred H
Q 025842 241 K 241 (247)
Q Consensus 241 ~ 241 (247)
+
T Consensus 356 ~ 356 (360)
T PLN02679 356 Q 356 (360)
T ss_pred h
Confidence 5
No 29
>PLN02965 Probable pheophorbidase
Probab=99.86 E-value=2.7e-20 Score=147.41 Aligned_cols=169 Identities=14% Similarity=0.113 Sum_probs=124.1
Q ss_pred eEEEEEcCccCCCcchHHHHHHHHHhcCcEEEEeccC-CCCCccCCCCcccchHHHHhhcCCccccchHHHHHHHHHhcC
Q 025842 44 SAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSKG 122 (247)
Q Consensus 44 ~~vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~ 122 (247)
..|||+||+ +.+...|..++..|+++||.|+++|++ +|.|. .+.....+. +...+|+.++++.+ +
T Consensus 4 ~~vvllHG~-~~~~~~w~~~~~~L~~~~~~via~Dl~G~G~S~-~~~~~~~~~---------~~~a~dl~~~l~~l---~ 69 (255)
T PLN02965 4 IHFVFVHGA-SHGAWCWYKLATLLDAAGFKSTCVDLTGAGISL-TDSNTVSSS---------DQYNRPLFALLSDL---P 69 (255)
T ss_pred eEEEEECCC-CCCcCcHHHHHHHHhhCCceEEEecCCcCCCCC-CCccccCCH---------HHHHHHHHHHHHhc---C
Confidence 348999955 445567889999998889999999998 77764 121111122 22335666666554 4
Q ss_pred C-CeEEEEEecccHHHHHHhhcCC--CccEEEEecCCC---C----------------------------C---------
Q 025842 123 V-SAIGAAGFCWGGVVAAKLASSH--DIQAAVVLHPGA---I----------------------------T--------- 159 (247)
Q Consensus 123 ~-~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~~~~---~----------------------------~--------- 159 (247)
. .++.++||||||.+++.++.++ +|+++|++++.. . .
T Consensus 70 ~~~~~~lvGhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (255)
T PLN02965 70 PDHKVILVGHSIGGGSVTEALCKFTDKISMAIYVAAAMVKPGSIISPRLKNVMEGTEKIWDYTFGEGPDKPPTGIMMKPE 149 (255)
T ss_pred CCCCEEEEecCcchHHHHHHHHhCchheeEEEEEccccCCCCCCccHHHHhhhhccccceeeeeccCCCCCcchhhcCHH
Confidence 4 4999999999999999988654 888888766430 0 0
Q ss_pred ------------------------------------ccccccccccEEEeecCCCCCCCHHHHHHHHHHHHhccCCCeeE
Q 025842 160 ------------------------------------VDDINEIKVPVAILGAEIDHVSPPEDLKRFGEILSAKLKNDCLV 203 (247)
Q Consensus 160 ------------------------------------~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~ 203 (247)
...+..+++|+++++|++|..+|++..+.+.+.++ +.++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vP~lvi~g~~D~~~~~~~~~~~~~~~~-----~a~~ 224 (255)
T PLN02965 150 FVRHYYYNQSPLEDYTLSSKLLRPAPVRAFQDLDKLPPNPEAEKVPRVYIKTAKDNLFDPVRQDVMVENWP-----PAQT 224 (255)
T ss_pred HHHHHHhcCCCHHHHHHHHHhcCCCCCcchhhhhhccchhhcCCCCEEEEEcCCCCCCCHHHHHHHHHhCC-----cceE
Confidence 00112478999999999999999999999998874 5689
Q ss_pred EEeCCCCccccccCCCCChHHHHHHHHHHHHHHHHHHH
Q 025842 204 KIYPRVSHGWTVRYNVEDEFAVKSAEEAHEDMINWLTK 241 (247)
Q Consensus 204 ~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~ 241 (247)
++++++||..... .++++.+.+.+|++.
T Consensus 225 ~~i~~~GH~~~~e----------~p~~v~~~l~~~~~~ 252 (255)
T PLN02965 225 YVLEDSDHSAFFS----------VPTTLFQYLLQAVSS 252 (255)
T ss_pred EEecCCCCchhhc----------CHHHHHHHHHHHHHH
Confidence 9999999988763 567888888888764
No 30
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.85 E-value=2.9e-20 Score=145.65 Aligned_cols=168 Identities=18% Similarity=0.281 Sum_probs=119.4
Q ss_pred CCeEEEEEcCccCCCcchHHHHHHHHHhcCcEEEEeccC-CCCCccCCCCcccchHHHHhhcCCccccchHHHHHHHHHh
Q 025842 42 SKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKS 120 (247)
Q Consensus 42 ~~~~vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~ 120 (247)
.+|+||++| |+|.+...|..+++.|. +||.|+++|++ +|.+. ......+... ..+|+.++++.+
T Consensus 12 ~~~~li~~h-g~~~~~~~~~~~~~~l~-~~~~v~~~d~~G~G~s~--~~~~~~~~~~---------~~~~~~~~i~~~-- 76 (251)
T TIGR02427 12 GAPVLVFIN-SLGTDLRMWDPVLPALT-PDFRVLRYDKRGHGLSD--APEGPYSIED---------LADDVLALLDHL-- 76 (251)
T ss_pred CCCeEEEEc-CcccchhhHHHHHHHhh-cccEEEEecCCCCCCCC--CCCCCCCHHH---------HHHHHHHHHHHh--
Confidence 457778887 56766677888888885 68999999998 77654 2212222222 225555555544
Q ss_pred cCCCeEEEEEecccHHHHHHhhcCC--CccEEEEecCCCC----------------------------------------
Q 025842 121 KGVSAIGAAGFCWGGVVAAKLASSH--DIQAAVVLHPGAI---------------------------------------- 158 (247)
Q Consensus 121 ~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~~~~~---------------------------------------- 158 (247)
+.+++.++|||+||.+++.+|... .+++++++++...
T Consensus 77 -~~~~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (251)
T TIGR02427 77 -GIERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGTPESWNARIAAVRAEGLAALADAVLERWFTPGFREAHP 155 (251)
T ss_pred -CCCceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCccccCchhhHHHHHhhhhhccHHHHHHHHHHHHcccccccCCh
Confidence 567899999999999999988543 6777776553210
Q ss_pred -----------------------------CccccccccccEEEeecCCCCCCCHHHHHHHHHHHHhccCCCeeEEEeCCC
Q 025842 159 -----------------------------TVDDINEIKVPVAILGAEIDHVSPPEDLKRFGEILSAKLKNDCLVKIYPRV 209 (247)
Q Consensus 159 -----------------------------~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 209 (247)
....+.++++|+++++|++|..+|.+..+.+.+.++ +.++++++++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~g~~D~~~~~~~~~~~~~~~~-----~~~~~~~~~~ 230 (251)
T TIGR02427 156 ARLDLYRNMLVRQPPDGYAGCCAAIRDADFRDRLGAIAVPTLCIAGDQDGSTPPELVREIADLVP-----GARFAEIRGA 230 (251)
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHhcccHHHHhhhcCCCeEEEEeccCCcCChHHHHHHHHhCC-----CceEEEECCC
Confidence 001234577999999999999999998888888763 5689999999
Q ss_pred CccccccCCCCChHHHHHHHHHHHHHHHHHH
Q 025842 210 SHGWTVRYNVEDEFAVKSAEEAHEDMINWLT 240 (247)
Q Consensus 210 ~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~ 240 (247)
+|..... ..++..+.+.+||+
T Consensus 231 gH~~~~~----------~p~~~~~~i~~fl~ 251 (251)
T TIGR02427 231 GHIPCVE----------QPEAFNAALRDFLR 251 (251)
T ss_pred CCccccc----------ChHHHHHHHHHHhC
Confidence 9987653 34677778888763
No 31
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.85 E-value=5.1e-20 Score=150.88 Aligned_cols=195 Identities=19% Similarity=0.211 Sum_probs=133.2
Q ss_pred eecCceEEEeecCCCCCCeEEEEEcCccCCCcch----------------------H----HHHHHHHHhcCcEEEEecc
Q 025842 26 QLGGLNTYVTGSGPPDSKSAILLISDVFGYEAPL----------------------F----RKLADKVAGAGFLVVAPDF 79 (247)
Q Consensus 26 ~~~~~~~~~~~p~~~~~~~~vv~~hgg~g~~~~~----------------------~----~~~a~~la~~G~~v~~~d~ 79 (247)
+.+|..+++....+..++..|+++| |++.+... + ..+++.|+++||.|+++|+
T Consensus 4 ~~~g~~l~~~~~~~~~~kg~v~i~H-G~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~~~D~ 82 (332)
T TIGR01607 4 NKDGLLLKTYSWIVKNAIGIIVLIH-GLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVYGLDL 82 (332)
T ss_pred CCCCCeEEEeeeeccCCeEEEEEEC-CCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEEEecc
Confidence 3456555555444445667778888 65544431 1 3579999999999999999
Q ss_pred C-CCCCccCCCCcccchHHHHhhcCCccccchHHHHHHHHHh--------------------cC-CCeEEEEEecccHHH
Q 025842 80 F-YGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKS--------------------KG-VSAIGAAGFCWGGVV 137 (247)
Q Consensus 80 ~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~--------------------~~-~~~i~l~G~S~Gg~~ 137 (247)
| ||.+. .......... .++..++|+..+++.+++ .. ..+++++||||||.+
T Consensus 83 rGHG~S~-~~~~~~g~~~------~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i 155 (332)
T TIGR01607 83 QGHGESD-GLQNLRGHIN------CFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNI 155 (332)
T ss_pred cccCCCc-cccccccchh------hHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHH
Confidence 9 88754 1111111111 223344788888887754 12 358999999999999
Q ss_pred HHHhhcC----------CCccEEEEecCCC----------------------------------C-C-------------
Q 025842 138 AAKLASS----------HDIQAAVVLHPGA----------------------------------I-T------------- 159 (247)
Q Consensus 138 a~~~a~~----------~~i~~~v~~~~~~----------------------------------~-~------------- 159 (247)
++.++.. ..++++|+.+|.. . .
T Consensus 156 ~~~~~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 235 (332)
T TIGR01607 156 ALRLLELLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFYLPVMNFMSRVFPTFRISKKIRYEKSPYVNDIIK 235 (332)
T ss_pred HHHHHHHhccccccccccccceEEEeccceEEecccCCCcchhhhhHHHHHHHHHHHCCcccccCccccccChhhhhHHh
Confidence 9987632 1477887666431 0 0
Q ss_pred -------------------------ccccccc--cccEEEeecCCCCCCCHHHHHHHHHHHHhccCCCeeEEEeCCCCcc
Q 025842 160 -------------------------VDDINEI--KVPVAILGAEIDHVSPPEDLKRFGEILSAKLKNDCLVKIYPRVSHG 212 (247)
Q Consensus 160 -------------------------~~~~~~~--~~P~l~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~H~ 212 (247)
...+..+ ++|+|+++|++|.+++.+.++.+++.+.. + ++++.+|++++|.
T Consensus 236 ~Dp~~~~~~~s~~~~~~l~~~~~~~~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~-~--~~~l~~~~g~~H~ 312 (332)
T TIGR01607 236 FDKFRYDGGITFNLASELIKATDTLDCDIDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLSI-S--NKELHTLEDMDHV 312 (332)
T ss_pred cCccccCCcccHHHHHHHHHHHHHHHhhHhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhccC-C--CcEEEEECCCCCC
Confidence 0122334 68999999999999999999988887622 2 6789999999999
Q ss_pred ccccCCCCChHHHHHHHHHHHHHHHHHH
Q 025842 213 WTVRYNVEDEFAVKSAEEAHEDMINWLT 240 (247)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~fl~ 240 (247)
...... .+++.+.+.+||.
T Consensus 313 i~~E~~---------~~~v~~~i~~wL~ 331 (332)
T TIGR01607 313 ITIEPG---------NEEVLKKIIEWIS 331 (332)
T ss_pred CccCCC---------HHHHHHHHHHHhh
Confidence 876522 4789999999986
No 32
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.85 E-value=5.2e-20 Score=147.12 Aligned_cols=184 Identities=22% Similarity=0.235 Sum_probs=131.9
Q ss_pred ceEEEeecCCCCCCeEEEEEcCccCCC---cchHHHHHHHHHhcCcEEEEeccC-CCCCccCCCCcccchHHHHhhcCCc
Q 025842 30 LNTYVTGSGPPDSKSAILLISDVFGYE---APLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTD 105 (247)
Q Consensus 30 ~~~~~~~p~~~~~~~~vv~~hgg~g~~---~~~~~~~a~~la~~G~~v~~~d~~-~g~~~~~~~~~~~~~~~~~~~~~~~ 105 (247)
+.+++..|... .+++||++|||.+.. ...+..+++.|+++||.|+++|++ +|.+. ... ..+..|
T Consensus 14 l~g~~~~p~~~-~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~--~~~--~~~~~~------- 81 (274)
T TIGR03100 14 LVGVLHIPGAS-HTTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSE--GEN--LGFEGI------- 81 (274)
T ss_pred EEEEEEcCCCC-CCCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCC--CCC--CCHHHH-------
Confidence 67888876543 456889899776532 223567889999999999999998 77654 111 122223
Q ss_pred cccchHHHHHHHHHhc--CCCeEEEEEecccHHHHHHhhcC-CCccEEEEecCCCCCc----------------------
Q 025842 106 KGYVDAKSVIAALKSK--GVSAIGAAGFCWGGVVAAKLASS-HDIQAAVVLHPGAITV---------------------- 160 (247)
Q Consensus 106 ~~~~d~~~~i~~l~~~--~~~~i~l~G~S~Gg~~a~~~a~~-~~i~~~v~~~~~~~~~---------------------- 160 (247)
..|+.++++++++. +.++|+++|||+||.+++.++.. .+++++|+++|.....
T Consensus 82 --~~d~~~~~~~l~~~~~g~~~i~l~G~S~Gg~~a~~~a~~~~~v~~lil~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (274)
T TIGR03100 82 --DADIAAAIDAFREAAPHLRRIVAWGLCDAASAALLYAPADLRVAGLVLLNPWVRTEAAQAASRIRHYYLGQLLSADFW 159 (274)
T ss_pred --HHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHhhhCCCccEEEEECCccCCcccchHHHHHHHHHHHHhChHHH
Confidence 38899999999875 45789999999999999998855 4999999998875110
Q ss_pred -----------------------------------------cccccccccEEEeecCCCCCCCHHHH------HHHHHHH
Q 025842 161 -----------------------------------------DDINEIKVPVAILGAEIDHVSPPEDL------KRFGEIL 193 (247)
Q Consensus 161 -----------------------------------------~~~~~~~~P~l~i~g~~D~~~~~~~~------~~~~~~l 193 (247)
..+..+++|+++++|..|...+ +.. .++.+.+
T Consensus 160 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~P~ll~~g~~D~~~~-~~~~~~~~~~~~~~~l 238 (274)
T TIGR03100 160 RKLLSGEVNLGSSLRGLGDALLKARQKGDEVAHGGLAERMKAGLERFQGPVLFILSGNDLTAQ-EFADSVLGEPAWRGAL 238 (274)
T ss_pred HHhcCCCccHHHHHHHHHHHHHhhhhcCCCcccchHHHHHHHHHHhcCCcEEEEEcCcchhHH-HHHHHhccChhhHHHh
Confidence 0123567899999999998753 222 2333333
Q ss_pred HhccCCCeeEEEeCCCCccccccCCCCChHHHHHHHHHHHHHHHHHH
Q 025842 194 SAKLKNDCLVKIYPRVSHGWTVRYNVEDEFAVKSAEEAHEDMINWLT 240 (247)
Q Consensus 194 ~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~ 240 (247)
.. .++++..+++++|.+... ...+++.+.+.+||+
T Consensus 239 -~~--~~v~~~~~~~~~H~l~~e---------~~~~~v~~~i~~wL~ 273 (274)
T TIGR03100 239 -ED--PGIERVEIDGADHTFSDR---------VWREWVAARTTEWLR 273 (274)
T ss_pred -hc--CCeEEEecCCCCcccccH---------HHHHHHHHHHHHHHh
Confidence 11 278899999999976332 356889999999996
No 33
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.85 E-value=6.6e-20 Score=145.24 Aligned_cols=161 Identities=16% Similarity=0.290 Sum_probs=119.0
Q ss_pred eEEEEEcCccCCCcchHHHHHHHHHhcCcEEEEeccC-CCCCccCCCCcccchHHHHhhcCCccccchHHHHHHHHHhcC
Q 025842 44 SAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSKG 122 (247)
Q Consensus 44 ~~vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~ 122 (247)
++|||+|| ++.+...|..++..|.+ .|.|+++|++ +|.+. .+. ..+ +....+.+.+..
T Consensus 14 ~~ivllHG-~~~~~~~w~~~~~~L~~-~~~vi~~Dl~G~G~S~-~~~--~~~----------------~~~~~~~l~~~~ 72 (256)
T PRK10349 14 VHLVLLHG-WGLNAEVWRCIDEELSS-HFTLHLVDLPGFGRSR-GFG--ALS----------------LADMAEAVLQQA 72 (256)
T ss_pred CeEEEECC-CCCChhHHHHHHHHHhc-CCEEEEecCCCCCCCC-CCC--CCC----------------HHHHHHHHHhcC
Confidence 56999995 56667789999999965 4999999998 77654 111 111 112233333445
Q ss_pred CCeEEEEEecccHHHHHHhhcCC--CccEEEEecCCCC------------------------------------------
Q 025842 123 VSAIGAAGFCWGGVVAAKLASSH--DIQAAVVLHPGAI------------------------------------------ 158 (247)
Q Consensus 123 ~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~~~~~------------------------------------------ 158 (247)
.+++.++||||||.+++.+|... +++++|++++...
T Consensus 73 ~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (256)
T PRK10349 73 PDKAIWLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQRTVERFLALQTMGTE 152 (256)
T ss_pred CCCeEEEEECHHHHHHHHHHHhChHhhheEEEecCccceecCCCCCcccHHHHHHHHHHHHhchHHHHHHHHHHHHccCc
Confidence 67999999999999999988554 8999988765320
Q ss_pred -----------------------------------CccccccccccEEEeecCCCCCCCHHHHHHHHHHHHhccCCCeeE
Q 025842 159 -----------------------------------TVDDINEIKVPVAILGAEIDHVSPPEDLKRFGEILSAKLKNDCLV 203 (247)
Q Consensus 159 -----------------------------------~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~ 203 (247)
....+.++++|+|+++|++|.++|.+..+.+.+.++ ++++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~i~-----~~~~ 227 (256)
T PRK10349 153 TARQDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWP-----HSES 227 (256)
T ss_pred hHHHHHHHHHHHhhccCCCcHHHHHHHHHHHHhCccHHHHhhcCCCeEEEecCCCccCCHHHHHHHHHhCC-----CCeE
Confidence 011345678999999999999999998888888774 6799
Q ss_pred EEeCCCCccccccCCCCChHHHHHHHHHHHHHHHHHH
Q 025842 204 KIYPRVSHGWTVRYNVEDEFAVKSAEEAHEDMINWLT 240 (247)
Q Consensus 204 ~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~ 240 (247)
++++++||..... .++.+.+.+.+|-+
T Consensus 228 ~~i~~~gH~~~~e----------~p~~f~~~l~~~~~ 254 (256)
T PRK10349 228 YIFAKAAHAPFIS----------HPAEFCHLLVALKQ 254 (256)
T ss_pred EEeCCCCCCcccc----------CHHHHHHHHHHHhc
Confidence 9999999987663 45777777777643
No 34
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.84 E-value=7e-20 Score=141.40 Aligned_cols=187 Identities=21% Similarity=0.238 Sum_probs=111.5
Q ss_pred CCCCCCeEEEEEcCccCCCcchHHHHHH-HHHhcCcEEEEeccCCCCCccCCCCcccchHHHHhhcCC-----------c
Q 025842 38 GPPDSKSAILLISDVFGYEAPLFRKLAD-KVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNT-----------D 105 (247)
Q Consensus 38 ~~~~~~~~vv~~hgg~g~~~~~~~~~a~-~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~-----------~ 105 (247)
+.+...+.||++| |+|.+...+..+.. .+......+++++-+..... ...+.....|+..... .
T Consensus 9 ~~~~~~~lvi~LH-G~G~~~~~~~~~~~~~~~~~~~~~i~p~ap~~~~~---~~~g~~~~~Wf~~~~~~~~~~~~~~~i~ 84 (216)
T PF02230_consen 9 PKGKAKPLVILLH-GYGDSEDLFALLAELNLALPNTRFISPRAPSRPVT---VPGGYRMPAWFDIYDFDPEGPEDEAGIE 84 (216)
T ss_dssp -SST-SEEEEEE---TTS-HHHHHHHHHHHTCSTTEEEEEE---EEE-G---GGTT-EEE-SS-BSCSSSSSEB-HHHHH
T ss_pred CCCCCceEEEEEC-CCCCCcchhHHHHhhcccCCceEEEeccCCCCCcc---cccccCCCceeeccCCCcchhhhHHHHH
Confidence 3444578888888 67877655544444 22234677887765410000 0000011123221111 1
Q ss_pred cccchHHHHHHHHHhc--CCCeEEEEEecccHHHHHHhhcCC--CccEEEEecCCCCCccccc----c-ccccEEEeecC
Q 025842 106 KGYVDAKSVIAALKSK--GVSAIGAAGFCWGGVVAAKLASSH--DIQAAVVLHPGAITVDDIN----E-IKVPVAILGAE 176 (247)
Q Consensus 106 ~~~~d~~~~i~~l~~~--~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~~~~~~~~~~~----~-~~~P~l~i~g~ 176 (247)
...+.+.++|+...+. +.++|+++|+|+||.+++.++... .+.+++++++......... . .+.|++++||.
T Consensus 85 ~s~~~l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~~~~~~~~~~~~~pi~~~hG~ 164 (216)
T PF02230_consen 85 ESAERLDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPESELEDRPEALAKTPILIIHGD 164 (216)
T ss_dssp HHHHHHHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGCCCHCCHCCCCTS-EEEEEET
T ss_pred HHHHHHHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeeccccccccccccccccCCCcEEEEecC
Confidence 1122344444433332 567999999999999999988544 9999999999875543322 1 25799999999
Q ss_pred CCCCCCHHHHHHHHHHHHhccCCCeeEEEeCCCCccccccCCCCChHHHHHHHHHHHHHHHHHHHHh
Q 025842 177 IDHVSPPEDLKRFGEILSAKLKNDCLVKIYPRVSHGWTVRYNVEDEFAVKSAEEAHEDMINWLTKYV 243 (247)
Q Consensus 177 ~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~ 243 (247)
+|+++|.+.++...+.+ ++.+.++++..|+|.+|.. ..+.++.+.+||++++
T Consensus 165 ~D~vvp~~~~~~~~~~L-~~~~~~v~~~~~~g~gH~i--------------~~~~~~~~~~~l~~~~ 216 (216)
T PF02230_consen 165 EDPVVPFEWAEKTAEFL-KAAGANVEFHEYPGGGHEI--------------SPEELRDLREFLEKHI 216 (216)
T ss_dssp T-SSSTHHHHHHHHHHH-HCTT-GEEEEEETT-SSS----------------HHHHHHHHHHHHHH-
T ss_pred CCCcccHHHHHHHHHHH-HhcCCCEEEEEcCCCCCCC--------------CHHHHHHHHHHHhhhC
Confidence 99999999999999999 6677789999999999985 4578899999999864
No 35
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.84 E-value=7.7e-19 Score=137.98 Aligned_cols=191 Identities=18% Similarity=0.243 Sum_probs=141.9
Q ss_pred eEEeecCceEEEeecCCCCCCeEEEEEcCccCCCcchHHHHHHHHHhcCcEEEEeccC-CCCCccCCCC-cccchHHHHh
Q 025842 23 TVQQLGGLNTYVTGSGPPDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNN-PQFDREAWRK 100 (247)
Q Consensus 23 ~~~~~~~~~~~~~~p~~~~~~~~vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~~-~g~~~~~~~~-~~~~~~~~~~ 100 (247)
.+.+++++..++..- ..+..|.|+++| |+-..+..|+.....|+++||+|+++|+| .|.+. .|.. ...++
T Consensus 25 k~~~~~gI~~h~~e~-g~~~gP~illlH-GfPe~wyswr~q~~~la~~~~rviA~DlrGyG~Sd-~P~~~~~Yt~----- 96 (322)
T KOG4178|consen 25 KFVTYKGIRLHYVEG-GPGDGPIVLLLH-GFPESWYSWRHQIPGLASRGYRVIAPDLRGYGFSD-APPHISEYTI----- 96 (322)
T ss_pred eeEEEccEEEEEEee-cCCCCCEEEEEc-cCCccchhhhhhhhhhhhcceEEEecCCCCCCCCC-CCCCcceeeH-----
Confidence 345788888888742 334567888888 66656788999999999999999999998 77766 3333 33333
Q ss_pred hcCCccccchHHHHHHHHHhcCCCeEEEEEecccHHHHHHhhcCC--CccEEEEecCCCC--------------------
Q 025842 101 IHNTDKGYVDAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLASSH--DIQAAVVLHPGAI-------------------- 158 (247)
Q Consensus 101 ~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~~~~~-------------------- 158 (247)
...+.|+.++++.+ +.+++.++||++|+.+|+.++... +++++|.++....
T Consensus 97 ----~~l~~di~~lld~L---g~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~~p~~~~~~~~~~~f~~~~y~ 169 (322)
T KOG4178|consen 97 ----DELVGDIVALLDHL---GLKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFPNPKLKPLDSSKAIFGKSYYI 169 (322)
T ss_pred ----HHHHHHHHHHHHHh---ccceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCCCcccchhhhhccccCcccee
Confidence 33347777777777 678999999999999999988543 8999888664430
Q ss_pred -----------------------------------------------------------------------------C--
Q 025842 159 -----------------------------------------------------------------------------T-- 159 (247)
Q Consensus 159 -----------------------------------------------------------------------------~-- 159 (247)
.
T Consensus 170 ~~fQ~~~~~E~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~t~edi~~~~~~f~~~g~~gplNyyrn~~r~w~a 249 (322)
T KOG4178|consen 170 CLFQEPGKPETELSKDDTEMLVKTFRTRKTPGPLIVPKQPNENPLWLTEEDIAFYVSKFQIDGFTGPLNYYRNFRRNWEA 249 (322)
T ss_pred EeccccCcchhhhccchhHHhHHhhhccccCCccccCCCCCCccchhhHHHHHHHHhccccccccccchhhHHHhhCchh
Confidence 0
Q ss_pred -ccccccccccEEEeecCCCCCCCHHHHHHHHH-HHHhccCCCeeEEEeCCCCccccccCCCCChHHHHHHHHHHHHHHH
Q 025842 160 -VDDINEIKVPVAILGAEIDHVSPPEDLKRFGE-ILSAKLKNDCLVKIYPRVSHGWTVRYNVEDEFAVKSAEEAHEDMIN 237 (247)
Q Consensus 160 -~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (247)
...+.+++.|++++.|.+|.+.+.......++ .++. -.+.++++|+||..... ..++..+.+++
T Consensus 250 ~~~~~~~i~iPv~fi~G~~D~v~~~p~~~~~~rk~vp~----l~~~vv~~~~gH~vqqe----------~p~~v~~~i~~ 315 (322)
T KOG4178|consen 250 APWALAKITIPVLFIWGDLDPVLPYPIFGELYRKDVPR----LTERVVIEGIGHFVQQE----------KPQEVNQAILG 315 (322)
T ss_pred ccccccccccceEEEEecCcccccchhHHHHHHHhhcc----ccceEEecCCccccccc----------CHHHHHHHHHH
Confidence 11345678999999999999998774444444 3321 34788999999987664 46899999999
Q ss_pred HHHHH
Q 025842 238 WLTKY 242 (247)
Q Consensus 238 fl~~~ 242 (247)
||++.
T Consensus 316 f~~~~ 320 (322)
T KOG4178|consen 316 FINSF 320 (322)
T ss_pred HHHhh
Confidence 99874
No 36
>PRK10162 acetyl esterase; Provisional
Probab=99.84 E-value=5.2e-19 Score=144.08 Aligned_cols=190 Identities=21% Similarity=0.230 Sum_probs=138.7
Q ss_pred CceEEEeecCCCCCCeEEEEEcCccC--CCcchHHHHHHHHHh-cCcEEEEeccCCCCCccCCCCcccchHHHHhhcCCc
Q 025842 29 GLNTYVTGSGPPDSKSAILLISDVFG--YEAPLFRKLADKVAG-AGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTD 105 (247)
Q Consensus 29 ~~~~~~~~p~~~~~~~~vv~~hgg~g--~~~~~~~~~a~~la~-~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~ 105 (247)
.+.+.++.|.. ...|.||++|||.- .+...+..++..|+. .|+.|+++||| ..+. ..+.
T Consensus 68 ~i~~~~y~P~~-~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYr-lape----------------~~~p 129 (318)
T PRK10162 68 QVETRLYYPQP-DSQATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYT-LSPE----------------ARFP 129 (318)
T ss_pred ceEEEEECCCC-CCCCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCC-CCCC----------------CCCC
Confidence 37888887643 34688999996441 233445678888887 49999999996 2221 0112
Q ss_pred cccchHHHHHHHHHhc------CCCeEEEEEecccHHHHHHhhcC--------CCccEEEEecCCCCCcc----------
Q 025842 106 KGYVDAKSVIAALKSK------GVSAIGAAGFCWGGVVAAKLASS--------HDIQAAVVLHPGAITVD---------- 161 (247)
Q Consensus 106 ~~~~d~~~~i~~l~~~------~~~~i~l~G~S~Gg~~a~~~a~~--------~~i~~~v~~~~~~~~~~---------- 161 (247)
...+|+.++++|+.++ +.++|+++|+|+||.+++.++.. ..++++++++|......
T Consensus 130 ~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~s~~~~~~~ 209 (318)
T PRK10162 130 QAIEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGLRDSVSRRLLGGV 209 (318)
T ss_pred CcHHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccCCCCChhHHHhCCC
Confidence 2347888888888753 45799999999999999987731 36888999888642100
Q ss_pred ---------------------------------ccccccccEEEeecCCCCCCCHHHHHHHHHHHHhccCCCeeEEEeCC
Q 025842 162 ---------------------------------DINEIKVPVAILGAEIDHVSPPEDLKRFGEILSAKLKNDCLVKIYPR 208 (247)
Q Consensus 162 ---------------------------------~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 208 (247)
++..--+|+++++|+.|++. +..+.+.+++ ++.|+++++++++|
T Consensus 210 ~~~l~~~~~~~~~~~y~~~~~~~~~p~~~p~~~~l~~~lPp~~i~~g~~D~L~--de~~~~~~~L-~~aGv~v~~~~~~g 286 (318)
T PRK10162 210 WDGLTQQDLQMYEEAYLSNDADRESPYYCLFNNDLTRDVPPCFIAGAEFDPLL--DDSRLLYQTL-AAHQQPCEFKLYPG 286 (318)
T ss_pred ccccCHHHHHHHHHHhCCCccccCCcccCcchhhhhcCCCCeEEEecCCCcCc--ChHHHHHHHH-HHcCCCEEEEEECC
Confidence 00012269999999999987 4678999999 77899999999999
Q ss_pred CCccccccCCCCChHHHHHHHHHHHHHHHHHHHHhc
Q 025842 209 VSHGWTVRYNVEDEFAVKSAEEAHEDMINWLTKYVK 244 (247)
Q Consensus 209 ~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~ 244 (247)
..|+|....... ...+++++.+.+||+++++
T Consensus 287 ~~H~f~~~~~~~-----~~a~~~~~~~~~~l~~~~~ 317 (318)
T PRK10162 287 TLHAFLHYSRMM-----DTADDALRDGAQFFTAQLK 317 (318)
T ss_pred CceehhhccCch-----HHHHHHHHHHHHHHHHHhc
Confidence 999997653321 3567899999999998875
No 37
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.84 E-value=4.9e-19 Score=142.47 Aligned_cols=187 Identities=14% Similarity=0.154 Sum_probs=128.2
Q ss_pred CCceEEeecCceEEEeecCCCCCCeEEEEEcCccCCCcchHHHHHHHHHhcCcEEEEeccC-CCCCccCCCCcccchHHH
Q 025842 20 GAGTVQQLGGLNTYVTGSGPPDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAW 98 (247)
Q Consensus 20 ~~~~~~~~~~~~~~~~~p~~~~~~~~vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~~-~g~~~~~~~~~~~~~~~~ 98 (247)
.......+++...++.. . +..++|||+||+ +.....|..+++.|.+ +|+|+++|++ +|.+. .+.....+...
T Consensus 14 ~~~~~~~~~~~~i~y~~--~-G~~~~iv~lHG~-~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~-~~~~~~~~~~~- 86 (286)
T PRK03204 14 FESRWFDSSRGRIHYID--E-GTGPPILLCHGN-PTWSFLYRDIIVALRD-RFRCVAPDYLGFGLSE-RPSGFGYQIDE- 86 (286)
T ss_pred ccceEEEcCCcEEEEEE--C-CCCCEEEEECCC-CccHHHHHHHHHHHhC-CcEEEEECCCCCCCCC-CCCccccCHHH-
Confidence 44456677887777663 2 345789999955 4455678888888854 6999999998 77665 22221122111
Q ss_pred HhhcCCccccchHHHHHHHHHhcCCCeEEEEEecccHHHHHHhhcCC--CccEEEEecCCCC------------------
Q 025842 99 RKIHNTDKGYVDAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLASSH--DIQAAVVLHPGAI------------------ 158 (247)
Q Consensus 99 ~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~~~~~------------------ 158 (247)
..+++.++++. .+.++++++|||+||.+++.++... +++++|++++...
T Consensus 87 --------~~~~~~~~~~~---~~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 155 (286)
T PRK03204 87 --------HARVIGEFVDH---LGLDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWFWPADTLAMKAFSRVMSSPP 155 (286)
T ss_pred --------HHHHHHHHHHH---hCCCCEEEEEECccHHHHHHHHHhChhheeEEEEECccccCCCchhHHHHHHHhcccc
Confidence 12444444443 3667999999999999999988543 8888887654210
Q ss_pred ----------------------Cc-------------------------cc-------ccc---------ccccEEEeec
Q 025842 159 ----------------------TV-------------------------DD-------INE---------IKVPVAILGA 175 (247)
Q Consensus 159 ----------------------~~-------------------------~~-------~~~---------~~~P~l~i~g 175 (247)
.. .. +.. .++|+++++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PtliI~G 235 (286)
T PRK03204 156 VQYAILRRNFFVERLIPAGTEHRPSSAVMAHYRAVQPNAAARRGVAEMPKQILAARPLLARLAREVPATLGTKPTLLVWG 235 (286)
T ss_pred chhhhhhhhHHHHHhccccccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHhcchhhHHHHHhhhhhhhhcCCCCeEEEec
Confidence 00 00 000 1799999999
Q ss_pred CCCCCCCHH-HHHHHHHHHHhccCCCeeEEEeCCCCccccccCCCCChHHHHHHHHHHHHHHHHH
Q 025842 176 EIDHVSPPE-DLKRFGEILSAKLKNDCLVKIYPRVSHGWTVRYNVEDEFAVKSAEEAHEDMINWL 239 (247)
Q Consensus 176 ~~D~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl 239 (247)
++|.++++. ..+.+.+.++ +.++++++++||..... .++++.+.+.+||
T Consensus 236 ~~D~~~~~~~~~~~~~~~ip-----~~~~~~i~~aGH~~~~e----------~Pe~~~~~i~~~~ 285 (286)
T PRK03204 236 MKDVAFRPKTILPRLRATFP-----DHVLVELPNAKHFIQED----------APDRIAAAIIERF 285 (286)
T ss_pred CCCcccCcHHHHHHHHHhcC-----CCeEEEcCCCccccccc----------CHHHHHHHHHHhc
Confidence 999988654 4677777774 67899999999998774 5678888888887
No 38
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.84 E-value=6.6e-19 Score=140.82 Aligned_cols=199 Identities=14% Similarity=0.118 Sum_probs=125.6
Q ss_pred ceEEEeecCC--CCCCeEEEEEcCccCCCcchHHHH--HHHHH-hcCcEEEEeccC-CCCCccCCCCcccc---hHHHHh
Q 025842 30 LNTYVTGSGP--PDSKSAILLISDVFGYEAPLFRKL--ADKVA-GAGFLVVAPDFF-YGDPIVDLNNPQFD---REAWRK 100 (247)
Q Consensus 30 ~~~~~~~p~~--~~~~~~vv~~hgg~g~~~~~~~~~--a~~la-~~G~~v~~~d~~-~g~~~~~~~~~~~~---~~~~~~ 100 (247)
+...++.|+. .++.|.|+++||+ +.+...+... ...++ +.||.|++||+. +|.+. ........ ...|..
T Consensus 27 ~~~~v~~P~~~~~~~~P~vvllHG~-~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~-~~~~~~w~~g~~~~~~~ 104 (275)
T TIGR02821 27 MTFGVFLPPQAAAGPVPVLWYLSGL-TCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGI-AGEDDAWDFGKGAGFYV 104 (275)
T ss_pred eEEEEEcCCCccCCCCCEEEEccCC-CCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCC-CCCcccccccCCccccc
Confidence 4466666653 3456778888854 4444455322 33454 569999999984 44321 01000000 000110
Q ss_pred hcCC---c---cccch-HHHHHHHHHh---cCCCeEEEEEecccHHHHHHhhcCC--CccEEEEecCCCCCc--------
Q 025842 101 IHNT---D---KGYVD-AKSVIAALKS---KGVSAIGAAGFCWGGVVAAKLASSH--DIQAAVVLHPGAITV-------- 160 (247)
Q Consensus 101 ~~~~---~---~~~~d-~~~~i~~l~~---~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~~~~~~~-------- 160 (247)
.... . ..... +.++...+.+ .+.++++++|+||||.+++.++... .++++++++|.....
T Consensus 105 d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 184 (275)
T TIGR02821 105 DATEEPWSQHYRMYSYIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPIVAPSRCPWGQKA 184 (275)
T ss_pred cCCcCcccccchHHHHHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCccCcccCcchHHH
Confidence 0000 0 00111 1223333333 3567999999999999999988553 788888888764110
Q ss_pred ---------cc---------c--ccccccEEEeecCCCCCCCH-HHHHHHHHHHHhccCCCeeEEEeCCCCccccccCCC
Q 025842 161 ---------DD---------I--NEIKVPVAILGAEIDHVSPP-EDLKRFGEILSAKLKNDCLVKIYPRVSHGWTVRYNV 219 (247)
Q Consensus 161 ---------~~---------~--~~~~~P~l~i~g~~D~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~H~~~~~~~~ 219 (247)
.. . ....+|+++++|++|+.+|. .....+.+.+ ++.|+++++.+++|++|+|..
T Consensus 185 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~plli~~G~~D~~v~~~~~~~~~~~~l-~~~g~~v~~~~~~g~~H~f~~---- 259 (275)
T TIGR02821 185 FSAYLGADEAAWRSYDASLLVADGGRHSTILIDQGTADQFLDEQLRPDAFEQAC-RAAGQALTLRRQAGYDHSYYF---- 259 (275)
T ss_pred HHHHhcccccchhhcchHHHHhhcccCCCeeEeecCCCcccCccccHHHHHHHH-HHcCCCeEEEEeCCCCccchh----
Confidence 00 0 12457999999999999998 5778888888 667889999999999999965
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHh
Q 025842 220 EDEFAVKSAEEAHEDMINWLTKYV 243 (247)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~fl~~~~ 243 (247)
....+++.++|+.+++
T Consensus 260 --------~~~~~~~~~~~~~~~~ 275 (275)
T TIGR02821 260 --------IASFIADHLRHHAERL 275 (275)
T ss_pred --------HHHhHHHHHHHHHhhC
Confidence 4788999999998764
No 39
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.83 E-value=9.9e-19 Score=147.91 Aligned_cols=187 Identities=17% Similarity=0.234 Sum_probs=128.6
Q ss_pred eecCceEEEeecCCC--CCCeEEEEEcCccCCCcchHHH-HHHHHH---hcCcEEEEeccC-CCCCccCCCCcccchHHH
Q 025842 26 QLGGLNTYVTGSGPP--DSKSAILLISDVFGYEAPLFRK-LADKVA---GAGFLVVAPDFF-YGDPIVDLNNPQFDREAW 98 (247)
Q Consensus 26 ~~~~~~~~~~~p~~~--~~~~~vv~~hgg~g~~~~~~~~-~a~~la---~~G~~v~~~d~~-~g~~~~~~~~~~~~~~~~ 98 (247)
+.+++..|+....+. ..+++|||+||+.+ +...|.. +...|+ +++|.|+++|++ +|.+. .+.....++..+
T Consensus 182 ~~~~~~l~~~~~gp~~~~~k~~VVLlHG~~~-s~~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~-~p~~~~ytl~~~ 259 (481)
T PLN03087 182 SSSNESLFVHVQQPKDNKAKEDVLFIHGFIS-SSAFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSP-KPADSLYTLREH 259 (481)
T ss_pred eeCCeEEEEEEecCCCCCCCCeEEEECCCCc-cHHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCc-CCCCCcCCHHHH
Confidence 456677877764332 23578999995544 4456653 445554 479999999998 77765 232222222222
Q ss_pred HhhcCCccccchHH-HHHHHHHhcCCCeEEEEEecccHHHHHHhhcCC--CccEEEEecCCCC-----------------
Q 025842 99 RKIHNTDKGYVDAK-SVIAALKSKGVSAIGAAGFCWGGVVAAKLASSH--DIQAAVVLHPGAI----------------- 158 (247)
Q Consensus 99 ~~~~~~~~~~~d~~-~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~~~~~----------------- 158 (247)
.+++. ++ +...+.+++.++||||||.+++.+|..+ +++++|++++...
T Consensus 260 ---------a~~l~~~l---l~~lg~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~~~~~~~~~~~~~~~~~~ 327 (481)
T PLN03087 260 ---------LEMIERSV---LERYKVKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYYPVPKGVQATQYVMRKVA 327 (481)
T ss_pred ---------HHHHHHHH---HHHcCCCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCccccccchhHHHHHHHHhc
Confidence 23442 33 3344678999999999999999988554 7888888774320
Q ss_pred -----C----------------c--------------------------------------c-c----------------
Q 025842 159 -----T----------------V--------------------------------------D-D---------------- 162 (247)
Q Consensus 159 -----~----------------~--------------------------------------~-~---------------- 162 (247)
. . . .
T Consensus 328 ~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~l~~~i~~~~~~l~ 407 (481)
T PLN03087 328 PRRVWPPIAFGASVACWYEHISRTICLVICKNHRLWEFLTRLLTRNRMRTFLIEGFFCHTHNAAWHTLHNIICGSGSKLD 407 (481)
T ss_pred ccccCCccccchhHHHHHHHHHhhhhcccccchHHHHHHHHHhhhhhhhHHHHHHHHhccchhhHHHHHHHHhchhhhhh
Confidence 0 0 0 0
Q ss_pred --c----ccccccEEEeecCCCCCCCHHHHHHHHHHHHhccCCCeeEEEeCCCCccccccCCCCChHHHHHHHHHHHHHH
Q 025842 163 --I----NEIKVPVAILGAEIDHVSPPEDLKRFGEILSAKLKNDCLVKIYPRVSHGWTVRYNVEDEFAVKSAEEAHEDMI 236 (247)
Q Consensus 163 --~----~~~~~P~l~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (247)
+ .++++|+|+++|++|.++|.+..+.+.+.++ ++++++++++||..... +.+++..+.+.
T Consensus 408 ~~l~~l~~~I~vPtLII~Ge~D~ivP~~~~~~la~~iP-----~a~l~vI~~aGH~~~v~---------e~p~~fa~~L~ 473 (481)
T PLN03087 408 GYLDHVRDQLKCDVAIFHGGDDELIPVECSYAVKAKVP-----RARVKVIDDKDHITIVV---------GRQKEFARELE 473 (481)
T ss_pred hHHHHHHHhCCCCEEEEEECCCCCCCHHHHHHHHHhCC-----CCEEEEeCCCCCcchhh---------cCHHHHHHHHH
Confidence 0 1468899999999999999999999988884 68999999999985431 13577888888
Q ss_pred HHHH
Q 025842 237 NWLT 240 (247)
Q Consensus 237 ~fl~ 240 (247)
+|..
T Consensus 474 ~F~~ 477 (481)
T PLN03087 474 EIWR 477 (481)
T ss_pred HHhh
Confidence 8875
No 40
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.83 E-value=1.8e-19 Score=140.74 Aligned_cols=161 Identities=20% Similarity=0.301 Sum_probs=118.7
Q ss_pred CeEEEEEcCccCCCcchHHHHHHHHHhcCcEEEEeccC-CCCCccCCCCcccchHHHHhhcCCccccchHHHHHHHHHhc
Q 025842 43 KSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSK 121 (247)
Q Consensus 43 ~~~vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~ 121 (247)
+++||++|| ++.+...|..+++.|+ .+|.|+++|++ +|.+. .. .. .++..+.+.+.+.
T Consensus 4 ~~~iv~~HG-~~~~~~~~~~~~~~l~-~~~~vi~~d~~G~G~s~--~~-~~----------------~~~~~~~~~~~~~ 62 (245)
T TIGR01738 4 NVHLVLIHG-WGMNAEVFRCLDEELS-AHFTLHLVDLPGHGRSR--GF-GP----------------LSLADAAEAIAAQ 62 (245)
T ss_pred CceEEEEcC-CCCchhhHHHHHHhhc-cCeEEEEecCCcCccCC--CC-CC----------------cCHHHHHHHHHHh
Confidence 378999995 5666678888999896 46999999998 66654 11 11 1233334444444
Q ss_pred CCCeEEEEEecccHHHHHHhhcCC--CccEEEEecCCCC-----------------------------------------
Q 025842 122 GVSAIGAAGFCWGGVVAAKLASSH--DIQAAVVLHPGAI----------------------------------------- 158 (247)
Q Consensus 122 ~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~~~~~----------------------------------------- 158 (247)
..+++.++|||+||.+++.++... .++++|++++...
T Consensus 63 ~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (245)
T TIGR01738 63 APDPAIWLGWSLGGLVALHIAATHPDRVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDDYQRTIERFLALQTLG 142 (245)
T ss_pred CCCCeEEEEEcHHHHHHHHHHHHCHHhhheeeEecCCcccccCCcccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhc
Confidence 446999999999999999988554 6888887654320
Q ss_pred -------------------C------------------ccccccccccEEEeecCCCCCCCHHHHHHHHHHHHhccCCCe
Q 025842 159 -------------------T------------------VDDINEIKVPVAILGAEIDHVSPPEDLKRFGEILSAKLKNDC 201 (247)
Q Consensus 159 -------------------~------------------~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~ 201 (247)
. ...+.++++|+++++|++|.++|.+..+.+.+.++ ++
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~-----~~ 217 (245)
T TIGR01738 143 TPTARQDARALKQTLLARPTPNVQVLQAGLEILATVDLRQPLQNISVPFLRLYGYLDGLVPAKVVPYLDKLAP-----HS 217 (245)
T ss_pred CCccchHHHHHHHHhhccCCCCHHHHHHHHHHhhcccHHHHHhcCCCCEEEEeecCCcccCHHHHHHHHHhCC-----CC
Confidence 0 01235688999999999999999998888887763 67
Q ss_pred eEEEeCCCCccccccCCCCChHHHHHHHHHHHHHHHHH
Q 025842 202 LVKIYPRVSHGWTVRYNVEDEFAVKSAEEAHEDMINWL 239 (247)
Q Consensus 202 ~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl 239 (247)
++++++++||..... ..++..+.+.+|+
T Consensus 218 ~~~~~~~~gH~~~~e----------~p~~~~~~i~~fi 245 (245)
T TIGR01738 218 ELYIFAKAAHAPFLS----------HAEAFCALLVAFK 245 (245)
T ss_pred eEEEeCCCCCCcccc----------CHHHHHHHHHhhC
Confidence 899999999987663 4678888888874
No 41
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.83 E-value=1.9e-19 Score=145.49 Aligned_cols=193 Identities=21% Similarity=0.176 Sum_probs=126.0
Q ss_pred ceEEEeecC-CCCCCeEEEEEcCccCCCcchHHHHHHHHHhcCcEEEEeccCCCCCccCCCCcc---cchHHHHh-----
Q 025842 30 LNTYVTGSG-PPDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQ---FDREAWRK----- 100 (247)
Q Consensus 30 ~~~~~~~p~-~~~~~~~vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~---~~~~~~~~----- 100 (247)
+.+|+..|. .+++.|.||.+| |+|.....+.... .++.+||.|+.+|.| |.+....+... .....+..
T Consensus 69 V~g~l~~P~~~~~~~Pavv~~h-Gyg~~~~~~~~~~-~~a~~G~~vl~~d~r-Gqg~~~~d~~~~~~~~~~g~~~~g~~~ 145 (320)
T PF05448_consen 69 VYGWLYRPKNAKGKLPAVVQFH-GYGGRSGDPFDLL-PWAAAGYAVLAMDVR-GQGGRSPDYRGSSGGTLKGHITRGIDD 145 (320)
T ss_dssp EEEEEEEES-SSSSEEEEEEE---TT--GGGHHHHH-HHHHTT-EEEEE--T-TTSSSS-B-SSBSSS-SSSSTTTTTTS
T ss_pred EEEEEEecCCCCCCcCEEEEec-CCCCCCCCccccc-ccccCCeEEEEecCC-CCCCCCCCccccCCCCCccHHhcCccC
Confidence 889999997 566678888888 5555444444433 578999999999996 43310111100 01111110
Q ss_pred ---hcCCccccchHHHHHHHHHhc---CCCeEEEEEecccHHHHHHhh-cCCCccEEEEecCCCCC--------------
Q 025842 101 ---IHNTDKGYVDAKSVIAALKSK---GVSAIGAAGFCWGGVVAAKLA-SSHDIQAAVVLHPGAIT-------------- 159 (247)
Q Consensus 101 ---~~~~~~~~~d~~~~i~~l~~~---~~~~i~l~G~S~Gg~~a~~~a-~~~~i~~~v~~~~~~~~-------------- 159 (247)
...+.....|+..+++++.++ |.++|++.|.|+||.+++.+| .+++|+++++..|..-.
T Consensus 146 ~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~rv~~~~~~vP~l~d~~~~~~~~~~~~~y 225 (320)
T PF05448_consen 146 NPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDPRVKAAAADVPFLCDFRRALELRADEGPY 225 (320)
T ss_dssp -TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSST-SEEEEESESSSSHHHHHHHT--STTT
T ss_pred chHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCccccEEEecCCCccchhhhhhcCCccccH
Confidence 011123447888999999987 567999999999999999976 56699999999887611
Q ss_pred -----------------------------ccccccccccEEEeecCCCCCCCHHHHHHHHHHHHhccCCCeeEEEeCCCC
Q 025842 160 -----------------------------VDDINEIKVPVAILGAEIDHVSPPEDLKRFGEILSAKLKNDCLVKIYPRVS 210 (247)
Q Consensus 160 -----------------------------~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 210 (247)
....+++++|+++..|-.|++||+...-..++.++. ++++.+|+..+
T Consensus 226 ~~~~~~~~~~d~~~~~~~~v~~~L~Y~D~~nfA~ri~~pvl~~~gl~D~~cPP~t~fA~yN~i~~----~K~l~vyp~~~ 301 (320)
T PF05448_consen 226 PEIRRYFRWRDPHHEREPEVFETLSYFDAVNFARRIKCPVLFSVGLQDPVCPPSTQFAAYNAIPG----PKELVVYPEYG 301 (320)
T ss_dssp HHHHHHHHHHSCTHCHHHHHHHHHHTT-HHHHGGG--SEEEEEEETT-SSS-HHHHHHHHCC--S----SEEEEEETT--
T ss_pred HHHHHHHhccCCCcccHHHHHHHHhhhhHHHHHHHcCCCEEEEEecCCCCCCchhHHHHHhccCC----CeeEEeccCcC
Confidence 112567899999999999999999999999999943 68999999999
Q ss_pred ccccccCCCCChHHHHHHHHHHHHHHHHHHHH
Q 025842 211 HGWTVRYNVEDEFAVKSAEEAHEDMINWLTKY 242 (247)
Q Consensus 211 H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~ 242 (247)
|.... +...++.++||.+|
T Consensus 302 He~~~-------------~~~~~~~~~~l~~~ 320 (320)
T PF05448_consen 302 HEYGP-------------EFQEDKQLNFLKEH 320 (320)
T ss_dssp SSTTH-------------HHHHHHHHHHHHH-
T ss_pred CCchh-------------hHHHHHHHHHHhcC
Confidence 98422 34488999999875
No 42
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.83 E-value=5.5e-20 Score=133.81 Aligned_cols=192 Identities=18% Similarity=0.202 Sum_probs=151.6
Q ss_pred ceEEeecCceEEEeecCCCCCCeEEEEEcCccCCCcchHHHHHHHHHhc-CcEEEEeccC-CCCCccCCCCcccchHHHH
Q 025842 22 GTVQQLGGLNTYVTGSGPPDSKSAILLISDVFGYEAPLFRKLADKVAGA-GFLVVAPDFF-YGDPIVDLNNPQFDREAWR 99 (247)
Q Consensus 22 ~~~~~~~~~~~~~~~p~~~~~~~~vv~~hgg~g~~~~~~~~~a~~la~~-G~~v~~~d~~-~g~~~~~~~~~~~~~~~~~ 99 (247)
...+.++|..+-+. ........|+++.|..|+....+......|-.. -+.+++.|.+ +|.|. |..........+
T Consensus 23 e~kv~vng~ql~y~--~~G~G~~~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpGYG~Sr--PP~Rkf~~~ff~ 98 (277)
T KOG2984|consen 23 ESKVHVNGTQLGYC--KYGHGPNYILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSR--PPERKFEVQFFM 98 (277)
T ss_pred hheeeecCceeeee--ecCCCCceeEecccccccccccCCHHHHhcCCCCceEEEEECCCCCCCCC--CCcccchHHHHH
Confidence 33567888887777 444445679999999998877887666555443 4999999998 88887 443333333333
Q ss_pred hhcCCccccchHHHHHHHHHhcCCCeEEEEEecccHHHHHHhhcCC--CccEEEEecCCCC-------------------
Q 025842 100 KIHNTDKGYVDAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLASSH--DIQAAVVLHPGAI------------------- 158 (247)
Q Consensus 100 ~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~~~~~------------------- 158 (247)
.|.+++++.++.+.-.++.++|||-||..++.+|.++ .|..++.+.+...
T Consensus 99 ---------~Da~~avdLM~aLk~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~~~ma~kgiRdv~kWs 169 (277)
T KOG2984|consen 99 ---------KDAEYAVDLMEALKLEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHLGAMAFKGIRDVNKWS 169 (277)
T ss_pred ---------HhHHHHHHHHHHhCCCCeeEeeecCCCeEEEEeeccChhhhhhheeecccceecchhHHHHhchHHHhhhh
Confidence 8899999999999889999999999999999988776 7888888776650
Q ss_pred --------------------------------------CccccccccccEEEeecCCCCCCCHHHHHHHHHHHHhccCCC
Q 025842 159 --------------------------------------TVDDINEIKVPVAILGAEIDHVSPPEDLKRFGEILSAKLKND 200 (247)
Q Consensus 159 --------------------------------------~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~l~~~~~~~ 200 (247)
....+.++++|+||+||++|++++...+..+....+ .
T Consensus 170 ~r~R~P~e~~Yg~e~f~~~wa~wvD~v~qf~~~~dG~fCr~~lp~vkcPtli~hG~kDp~~~~~hv~fi~~~~~-----~ 244 (277)
T KOG2984|consen 170 ARGRQPYEDHYGPETFRTQWAAWVDVVDQFHSFCDGRFCRLVLPQVKCPTLIMHGGKDPFCGDPHVCFIPVLKS-----L 244 (277)
T ss_pred hhhcchHHHhcCHHHHHHHHHHHHHHHHHHhhcCCCchHhhhcccccCCeeEeeCCcCCCCCCCCccchhhhcc-----c
Confidence 022477899999999999999999999888887764 6
Q ss_pred eeEEEeCCCCccccccCCCCChHHHHHHHHHHHHHHHHHHH
Q 025842 201 CLVKIYPRVSHGWTVRYNVEDEFAVKSAEEAHEDMINWLTK 241 (247)
Q Consensus 201 ~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~ 241 (247)
++++++|.++|.|... .+++....+++||++
T Consensus 245 a~~~~~peGkHn~hLr----------ya~eFnklv~dFl~~ 275 (277)
T KOG2984|consen 245 AKVEIHPEGKHNFHLR----------YAKEFNKLVLDFLKS 275 (277)
T ss_pred ceEEEccCCCcceeee----------chHHHHHHHHHHHhc
Confidence 7899999999999886 457999999999985
No 43
>PLN02578 hydrolase
Probab=99.82 E-value=1.5e-18 Score=143.77 Aligned_cols=183 Identities=16% Similarity=0.214 Sum_probs=129.8
Q ss_pred eEEeecCceEEEeecCCCCCCeEEEEEcCccCCCcchHHHHHHHHHhcCcEEEEeccC-CCCCccCCCCcccchHHHHhh
Q 025842 23 TVQQLGGLNTYVTGSGPPDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKI 101 (247)
Q Consensus 23 ~~~~~~~~~~~~~~p~~~~~~~~vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~~-~g~~~~~~~~~~~~~~~~~~~ 101 (247)
...+..+...++... ++.++||++| |++.+...|..++..|++ +|.|+++|++ +|.+. .+ ....+...|
T Consensus 69 ~~~~~~~~~i~Y~~~---g~g~~vvliH-G~~~~~~~w~~~~~~l~~-~~~v~~~D~~G~G~S~-~~-~~~~~~~~~--- 138 (354)
T PLN02578 69 NFWTWRGHKIHYVVQ---GEGLPIVLIH-GFGASAFHWRYNIPELAK-KYKVYALDLLGFGWSD-KA-LIEYDAMVW--- 138 (354)
T ss_pred eEEEECCEEEEEEEc---CCCCeEEEEC-CCCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCC-Cc-ccccCHHHH---
Confidence 445667777766632 2447899999 455556788888888865 6999999998 77655 22 112222222
Q ss_pred cCCccccchHHHHHHHHHhcCCCeEEEEEecccHHHHHHhhcCC--CccEEEEecCCCC---------------------
Q 025842 102 HNTDKGYVDAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLASSH--DIQAAVVLHPGAI--------------------- 158 (247)
Q Consensus 102 ~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~~~~~--------------------- 158 (247)
.+++.++++. ...+++.++|||+||.+++.+|.+. ++++++++++...
T Consensus 139 ------a~~l~~~i~~---~~~~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (354)
T PLN02578 139 ------RDQVADFVKE---VVKEPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAGQFGSESREKEEAIVVEETVLTR 209 (354)
T ss_pred ------HHHHHHHHHH---hccCCeEEEEECHHHHHHHHHHHhChHhcceEEEECCCccccccccccccccccccchhhH
Confidence 2445444444 4567999999999999999988654 8888887654210
Q ss_pred ------------------------------------------------------------------------------Cc
Q 025842 159 ------------------------------------------------------------------------------TV 160 (247)
Q Consensus 159 ------------------------------------------------------------------------------~~ 160 (247)
..
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (354)
T PLN02578 210 FVVKPLKEWFQRVVLGFLFWQAKQPSRIESVLKSVYKDKSNVDDYLVESITEPAADPNAGEVYYRLMSRFLFNQSRYTLD 289 (354)
T ss_pred HHhHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHhcCCcccCCHHHHHHHHhcccCCchHHHHHHHHHHHhcCCCCCCHH
Confidence 00
Q ss_pred cccccccccEEEeecCCCCCCCHHHHHHHHHHHHhccCCCeeEEEeCCCCccccccCCCCChHHHHHHHHHHHHHHHHHH
Q 025842 161 DDINEIKVPVAILGAEIDHVSPPEDLKRFGEILSAKLKNDCLVKIYPRVSHGWTVRYNVEDEFAVKSAEEAHEDMINWLT 240 (247)
Q Consensus 161 ~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~ 240 (247)
+.+.++++|+++++|++|.++|.+.++.+.+.++ +.++++++ +||..... .++++.+.+.+|++
T Consensus 290 ~~l~~i~~PvLiI~G~~D~~v~~~~~~~l~~~~p-----~a~l~~i~-~GH~~~~e----------~p~~~~~~I~~fl~ 353 (354)
T PLN02578 290 SLLSKLSCPLLLLWGDLDPWVGPAKAEKIKAFYP-----DTTLVNLQ-AGHCPHDE----------VPEQVNKALLEWLS 353 (354)
T ss_pred HHhhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCC-----CCEEEEeC-CCCCcccc----------CHHHHHHHHHHHHh
Confidence 0124568999999999999999999888888773 56788885 79987653 56789999999985
No 44
>PRK10985 putative hydrolase; Provisional
Probab=99.82 E-value=9.8e-19 Score=143.09 Aligned_cols=183 Identities=19% Similarity=0.213 Sum_probs=126.5
Q ss_pred CCeEEEEEcCccCCCcc-hHHHHHHHHHhcCcEEEEeccC-CCCCccCCCCcccchHHHHhhcCCccccchHHHHHHHHH
Q 025842 42 SKSAILLISDVFGYEAP-LFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALK 119 (247)
Q Consensus 42 ~~~~vv~~hgg~g~~~~-~~~~~a~~la~~G~~v~~~d~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~ 119 (247)
.+|+||++||..|.... .+..++..|+++||.|+++|+| +|.+ +...... ......+|+..++++++
T Consensus 57 ~~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~---~~~~~~~--------~~~~~~~D~~~~i~~l~ 125 (324)
T PRK10985 57 HKPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGE---PNRLHRI--------YHSGETEDARFFLRWLQ 125 (324)
T ss_pred CCCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCC---ccCCcce--------ECCCchHHHHHHHHHHH
Confidence 46889999966554322 3456889999999999999997 5432 1110000 01123488999999998
Q ss_pred hc-CCCeEEEEEecccHHHHHHhh-cCC---CccEEEEecCCCC------------------------------------
Q 025842 120 SK-GVSAIGAAGFCWGGVVAAKLA-SSH---DIQAAVVLHPGAI------------------------------------ 158 (247)
Q Consensus 120 ~~-~~~~i~l~G~S~Gg~~a~~~a-~~~---~i~~~v~~~~~~~------------------------------------ 158 (247)
+. +..+++++||||||.+++.++ ... .+++++++++...
T Consensus 126 ~~~~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 205 (324)
T PRK10985 126 REFGHVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEACSYRMEQGFSRVYQRYLLNLLKANAARKLAAYP 205 (324)
T ss_pred HhCCCCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 75 667999999999999877655 322 4888888776530
Q ss_pred -----------------------------------------CccccccccccEEEeecCCCCCCCHHHHHHHHHHHHhcc
Q 025842 159 -----------------------------------------TVDDINEIKVPVAILGAEIDHVSPPEDLKRFGEILSAKL 197 (247)
Q Consensus 159 -----------------------------------------~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~l~~~~ 197 (247)
....+.++++|+++++|++|++++.+....+.+.. +
T Consensus 206 ~~~~~~~~~~~~~~~~~~fd~~~~~~~~g~~~~~~~y~~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~---~ 282 (324)
T PRK10985 206 GTLPINLAQLKSVRRLREFDDLITARIHGFADAIDYYRQCSALPLLNQIRKPTLIIHAKDDPFMTHEVIPKPESLP---P 282 (324)
T ss_pred ccccCCHHHHhcCCcHHHHhhhheeccCCCCCHHHHHHHCChHHHHhCCCCCEEEEecCCCCCCChhhChHHHHhC---C
Confidence 01235678899999999999999988777664433 1
Q ss_pred CCCeeEEEeCCCCccccccCCCCChHHHHHHHHHHHHHHHHHHHHhcc
Q 025842 198 KNDCLVKIYPRVSHGWTVRYNVEDEFAVKSAEEAHEDMINWLTKYVKR 245 (247)
Q Consensus 198 ~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~ 245 (247)
+.++.+++++||.....+.... ......+.+++||+..+..
T Consensus 283 --~~~~~~~~~~GH~~~~~g~~~~-----~~~w~~~~~~~~~~~~~~~ 323 (324)
T PRK10985 283 --NVEYQLTEHGGHVGFVGGTLLK-----PQMWLEQRIPDWLTTYLEA 323 (324)
T ss_pred --CeEEEECCCCCceeeCCCCCCC-----CCccHHHHHHHHHHHhhcC
Confidence 6788999999997655432110 1246777888999876543
No 45
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.81 E-value=3.2e-18 Score=141.58 Aligned_cols=199 Identities=18% Similarity=0.209 Sum_probs=138.4
Q ss_pred CCCceEEeecCceEEEeecCCC-CCCeEEEEEcCccC----CCcchHHHHHHHHHhcCcEEEEeccC-CCCCccCCCCcc
Q 025842 19 CGAGTVQQLGGLNTYVTGSGPP-DSKSAILLISDVFG----YEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQ 92 (247)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~p~~~-~~~~~vv~~hgg~g----~~~~~~~~~a~~la~~G~~v~~~d~~-~g~~~~~~~~~~ 92 (247)
+|...+.+.+.+.++.+.|..+ ..+++||++|+... .+...++.+++.|+++||.|+++|++ +|.+. ..
T Consensus 37 ~~~~~v~~~~~~~l~~~~~~~~~~~~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~-----~~ 111 (350)
T TIGR01836 37 TPKEVVYREDKVVLYRYTPVKDNTHKTPLLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRAD-----RY 111 (350)
T ss_pred CCCceEEEcCcEEEEEecCCCCcCCCCcEEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHH-----hc
Confidence 4445555777788888865432 33567888885432 11112367999999999999999996 44322 11
Q ss_pred cchHHHHhhcCCccccchHHHHHHHHHhc-CCCeEEEEEecccHHHHHHhhcCC--CccEEEEecCCCCC----------
Q 025842 93 FDREAWRKIHNTDKGYVDAKSVIAALKSK-GVSAIGAAGFCWGGVVAAKLASSH--DIQAAVVLHPGAIT---------- 159 (247)
Q Consensus 93 ~~~~~~~~~~~~~~~~~d~~~~i~~l~~~-~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~~~~~~---------- 159 (247)
.....|.. .++.++++++.+. +.+++.++||||||.+++.++... ++++++++++....
T Consensus 112 ~~~~d~~~--------~~~~~~v~~l~~~~~~~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~~~~~~~~~~~ 183 (350)
T TIGR01836 112 LTLDDYIN--------GYIDKCVDYICRTSKLDQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDFETPGNMLSNW 183 (350)
T ss_pred CCHHHHHH--------HHHHHHHHHHHHHhCCCcccEEEECHHHHHHHHHHHhCchheeeEEEeccccccCCCCchhhhh
Confidence 12233321 4578888888876 567999999999999999976443 68888776653200
Q ss_pred --------------------------------------------------------------------------------
Q 025842 160 -------------------------------------------------------------------------------- 159 (247)
Q Consensus 160 -------------------------------------------------------------------------------- 159 (247)
T Consensus 184 ~~~~~~~~~~~~~~~~p~~~~~~~f~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~d~~~~~~~~~~~~~~~~~ 263 (350)
T TIGR01836 184 ARHVDIDLAVDTMGNIPGELLNLTFLMLKPFSLGYQKYVNLVDILEDERKVENFLRMEKWIFDSPDQAGEAFRQFVKDFY 263 (350)
T ss_pred ccccCHHHHHHhcCCCCHHHHHHHHHhcCcchhhhHHHHHHHHhcCChHHHHHHHHHHHHhcCCcCccHHHHHHHHHHHH
Confidence
Q ss_pred ---------------ccccccccccEEEeecCCCCCCCHHHHHHHHHHHHhccCCCeeEEEeCCCCccccccCCCCChHH
Q 025842 160 ---------------VDDINEIKVPVAILGAEIDHVSPPEDLKRFGEILSAKLKNDCLVKIYPRVSHGWTVRYNVEDEFA 224 (247)
Q Consensus 160 ---------------~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~ 224 (247)
..++.++++|+++++|++|.++|.+.++.+.+.++. ..++++++++ +|.......
T Consensus 264 ~~n~l~~g~~~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~~~~~~~~---~~~~~~~~~~-gH~~~~~~~------ 333 (350)
T TIGR01836 264 QQNGLINGEVEIGGRKVDLKNIKMPILNIYAERDHLVPPDASKALNDLVSS---EDYTELSFPG-GHIGIYVSG------ 333 (350)
T ss_pred hcCcccCCeeEECCEEccHHhCCCCeEEEecCCCCcCCHHHHHHHHHHcCC---CCeEEEEcCC-CCEEEEECc------
Confidence 001335688999999999999999999999998732 2678888885 665443332
Q ss_pred HHHHHHHHHHHHHHHHH
Q 025842 225 VKSAEEAHEDMINWLTK 241 (247)
Q Consensus 225 ~~~~~~~~~~~~~fl~~ 241 (247)
...+++++.+.+||.+
T Consensus 334 -~~~~~v~~~i~~wl~~ 349 (350)
T TIGR01836 334 -KAQKEVPPAIGKWLQA 349 (350)
T ss_pred -hhHhhhhHHHHHHHHh
Confidence 2568999999999986
No 46
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.81 E-value=5.6e-18 Score=140.50 Aligned_cols=186 Identities=16% Similarity=0.198 Sum_probs=133.6
Q ss_pred eEEeecCceEEEeecCCCCCCeEEEEEcCccCCCcchHHHHHHHHHhcCcEEEEeccC-CCCCccCCCCc---ccchHHH
Q 025842 23 TVQQLGGLNTYVTGSGPPDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNP---QFDREAW 98 (247)
Q Consensus 23 ~~~~~~~~~~~~~~p~~~~~~~~vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~~-~g~~~~~~~~~---~~~~~~~ 98 (247)
.....+++..++..- .++..++|||+| |++.+...|+.++..|++ +|.|+++|++ +|.+. .+... ..+...|
T Consensus 108 ~~~~~~~~~~~y~~~-G~~~~~~ivllH-G~~~~~~~w~~~~~~L~~-~~~Via~DlpG~G~S~-~p~~~~~~~ys~~~~ 183 (383)
T PLN03084 108 SQASSDLFRWFCVES-GSNNNPPVLLIH-GFPSQAYSYRKVLPVLSK-NYHAIAFDWLGFGFSD-KPQPGYGFNYTLDEY 183 (383)
T ss_pred eEEcCCceEEEEEec-CCCCCCeEEEEC-CCCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCC-CCcccccccCCHHHH
Confidence 344566777766632 223457899999 456566788999999965 7999999999 88765 23211 1233333
Q ss_pred HhhcCCccccchHHHHHHHHHhcCCCeEEEEEecccHHHHHHhhcCC--CccEEEEecCCCCC-----------------
Q 025842 99 RKIHNTDKGYVDAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLASSH--DIQAAVVLHPGAIT----------------- 159 (247)
Q Consensus 99 ~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~~~~~~----------------- 159 (247)
++++.++++.+ +.+++.++|||+||.+++.++..+ +|+++|++++....
T Consensus 184 ---------a~~l~~~i~~l---~~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~~~~~~~p~~l~~~~~~l~ 251 (383)
T PLN03084 184 ---------VSSLESLIDEL---KSDKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLTKEHAKLPSTLSEFSNFLL 251 (383)
T ss_pred ---------HHHHHHHHHHh---CCCCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCccccccchHHHHHHHHHHh
Confidence 35666666555 567899999999999999988654 88888887755200
Q ss_pred -----------------------------------------------------ccc-------c------ccccccEEEe
Q 025842 160 -----------------------------------------------------VDD-------I------NEIKVPVAIL 173 (247)
Q Consensus 160 -----------------------------------------------------~~~-------~------~~~~~P~l~i 173 (247)
... + ..+++|++++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~r~~~~~l~~~~~~l~~~l~~~~i~vPvLiI 331 (383)
T PLN03084 252 GEIFSQDPLRASDKALTSCGPYAMKEDDAMVYRRPYLTSGSSGFALNAISRSMKKELKKYIEEMRSILTDKNWKTPITVC 331 (383)
T ss_pred hhhhhcchHHHHhhhhcccCccCCCHHHHHHHhccccCCcchHHHHHHHHHHhhcccchhhHHHHhhhccccCCCCEEEE
Confidence 000 0 1357899999
Q ss_pred ecCCCCCCCHHHHHHHHHHHHhccCCCeeEEEeCCCCccccccCCCCChHHHHHHHHHHHHHHHHHH
Q 025842 174 GAEIDHVSPPEDLKRFGEILSAKLKNDCLVKIYPRVSHGWTVRYNVEDEFAVKSAEEAHEDMINWLT 240 (247)
Q Consensus 174 ~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~ 240 (247)
+|+.|.+++.+..+.+.+.. +.++.++++++|..... .++++.+.+.+||+
T Consensus 332 ~G~~D~~v~~~~~~~~a~~~------~a~l~vIp~aGH~~~~E----------~Pe~v~~~I~~Fl~ 382 (383)
T PLN03084 332 WGLRDRWLNYDGVEDFCKSS------QHKLIELPMAGHHVQED----------CGEELGGIISGILS 382 (383)
T ss_pred eeCCCCCcCHHHHHHHHHhc------CCeEEEECCCCCCcchh----------CHHHHHHHHHHHhh
Confidence 99999999998877777753 56899999999987663 56889999999886
No 47
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.81 E-value=2.9e-18 Score=130.29 Aligned_cols=184 Identities=19% Similarity=0.161 Sum_probs=134.8
Q ss_pred ceEEEeecCCCCCCeEEEEEcCccCCCcchHHHHHHHHHh-cCcEEEEeccC-CCCCccCCCCcccchHHHHhhcCCccc
Q 025842 30 LNTYVTGSGPPDSKSAILLISDVFGYEAPLFRKLADKVAG-AGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKG 107 (247)
Q Consensus 30 ~~~~~~~p~~~~~~~~vv~~hgg~g~~~~~~~~~a~~la~-~G~~v~~~d~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (247)
+.+.++.| +....+.+|+.||- ..+-..+..+...|.. ..+.++.+||+ .|.+.+.+... ..
T Consensus 48 ~~~~y~~~-~~~~~~~lly~hGN-a~Dlgq~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE~--------------n~ 111 (258)
T KOG1552|consen 48 IVCMYVRP-PEAAHPTLLYSHGN-AADLGQMVELFKELSIFLNCNVVSYDYSGYGRSSGKPSER--------------NL 111 (258)
T ss_pred EEEEEEcC-ccccceEEEEcCCc-ccchHHHHHHHHHHhhcccceEEEEecccccccCCCcccc--------------cc
Confidence 45555543 33356888888854 3222223334444444 38999999997 55544222221 23
Q ss_pred cchHHHHHHHHHhcC--CCeEEEEEecccHHHHHHhhcCCCccEEEEecCCCC-------------------Cccccccc
Q 025842 108 YVDAKSVIAALKSKG--VSAIGAAGFCWGGVVAAKLASSHDIQAAVVLHPGAI-------------------TVDDINEI 166 (247)
Q Consensus 108 ~~d~~~~i~~l~~~~--~~~i~l~G~S~Gg~~a~~~a~~~~i~~~v~~~~~~~-------------------~~~~~~~~ 166 (247)
.+|++++.++|++.. .++|+++|+|+|...++.+|.+..+.++|+.+|... ..+..+.+
T Consensus 112 y~Di~avye~Lr~~~g~~~~Iil~G~SiGt~~tv~Lasr~~~~alVL~SPf~S~~rv~~~~~~~~~~~d~f~~i~kI~~i 191 (258)
T KOG1552|consen 112 YADIKAVYEWLRNRYGSPERIILYGQSIGTVPTVDLASRYPLAAVVLHSPFTSGMRVAFPDTKTTYCFDAFPNIEKISKI 191 (258)
T ss_pred hhhHHHHHHHHHhhcCCCceEEEEEecCCchhhhhHhhcCCcceEEEeccchhhhhhhccCcceEEeeccccccCcceec
Confidence 389999999999974 589999999999999999987666999999888762 24556778
Q ss_pred cccEEEeecCCCCCCCHHHHHHHHHHHHhccCCCeeEEEeCCCCccccccCCCCChHHHHHHHHHHHHHHHHHHHHhc
Q 025842 167 KVPVAILGAEIDHVSPPEDLKRFGEILSAKLKNDCLVKIYPRVSHGWTVRYNVEDEFAVKSAEEAHEDMINWLTKYVK 244 (247)
Q Consensus 167 ~~P~l~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~ 244 (247)
++|+|++||++|+++|.....++++..+ . +.+-.+..|++|..... ..+.+..+..|+.....
T Consensus 192 ~~PVLiiHgtdDevv~~sHg~~Lye~~k-~---~~epl~v~g~gH~~~~~-----------~~~yi~~l~~f~~~~~~ 254 (258)
T KOG1552|consen 192 TCPVLIIHGTDDEVVDFSHGKALYERCK-E---KVEPLWVKGAGHNDIEL-----------YPEYIEHLRRFISSVLP 254 (258)
T ss_pred cCCEEEEecccCceecccccHHHHHhcc-c---cCCCcEEecCCCccccc-----------CHHHHHHHHHHHHHhcc
Confidence 9999999999999999999999999984 2 56888889999986553 34677888888775543
No 48
>PLN02511 hydrolase
Probab=99.80 E-value=2.4e-18 Score=143.79 Aligned_cols=182 Identities=18% Similarity=0.218 Sum_probs=123.4
Q ss_pred CCeEEEEEcCccCCCcc-hHHHHHHHHHhcCcEEEEeccC-CCCCccCCCCcccchHHHHhhcCCccccchHHHHHHHHH
Q 025842 42 SKSAILLISDVFGYEAP-LFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALK 119 (247)
Q Consensus 42 ~~~~vv~~hgg~g~~~~-~~~~~a~~la~~G~~v~~~d~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~ 119 (247)
..|+||++||..|.... .+..++..+.++||.|+++|+| +|.+. ..... .......+|+.++++++.
T Consensus 99 ~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~--~~~~~---------~~~~~~~~Dl~~~i~~l~ 167 (388)
T PLN02511 99 DAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSP--VTTPQ---------FYSASFTGDLRQVVDHVA 167 (388)
T ss_pred CCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCC--CCCcC---------EEcCCchHHHHHHHHHHH
Confidence 46789999977665433 3456777788899999999998 66543 11111 111344589999999998
Q ss_pred hc-CCCeEEEEEecccHHHHHHhhcCC----CccEEEEecCCCC------------------------------------
Q 025842 120 SK-GVSAIGAAGFCWGGVVAAKLASSH----DIQAAVVLHPGAI------------------------------------ 158 (247)
Q Consensus 120 ~~-~~~~i~l~G~S~Gg~~a~~~a~~~----~i~~~v~~~~~~~------------------------------------ 158 (247)
.. +..++.++||||||.+++.++.+. .+.+++++++...
T Consensus 168 ~~~~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~~~~~~~~~~~~~~y~~~~~~~l~~~~~~~~~~~~ 247 (388)
T PLN02511 168 GRYPSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLVIADEDFHKGFNNVYDKALAKALRKIFAKHALLFE 247 (388)
T ss_pred HHCCCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 76 446899999999999999977443 3778776654320
Q ss_pred ------------------------------------------CccccccccccEEEeecCCCCCCCHHHHH-HHHHHHHh
Q 025842 159 ------------------------------------------TVDDINEIKVPVAILGAEIDHVSPPEDLK-RFGEILSA 195 (247)
Q Consensus 159 ------------------------------------------~~~~~~~~~~P~l~i~g~~D~~~~~~~~~-~~~~~l~~ 195 (247)
....+.++++|+|+++|++|+++|.+... ...+.+
T Consensus 248 ~~~~~~~~~~~~~~~~~~~fd~~~t~~~~gf~~~~~yy~~~s~~~~L~~I~vPtLiI~g~dDpi~p~~~~~~~~~~~~-- 325 (388)
T PLN02511 248 GLGGEYNIPLVANAKTVRDFDDGLTRVSFGFKSVDAYYSNSSSSDSIKHVRVPLLCIQAANDPIAPARGIPREDIKAN-- 325 (388)
T ss_pred hCCCccCHHHHHhCCCHHHHHHhhhhhcCCCCCHHHHHHHcCchhhhccCCCCeEEEEcCCCCcCCcccCcHhHHhcC--
Confidence 01134568899999999999999976542 233333
Q ss_pred ccCCCeeEEEeCCCCccccccCCCCChHHHHHHHHHHHHHHHHHHHHh
Q 025842 196 KLKNDCLVKIYPRVSHGWTVRYNVEDEFAVKSAEEAHEDMINWLTKYV 243 (247)
Q Consensus 196 ~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~ 243 (247)
+ ++++++++++||.......... .....+.+.+.+||+...
T Consensus 326 -p--~~~l~~~~~gGH~~~~E~p~~~----~~~~w~~~~i~~Fl~~~~ 366 (388)
T PLN02511 326 -P--NCLLIVTPSGGHLGWVAGPEAP----FGAPWTDPVVMEFLEALE 366 (388)
T ss_pred -C--CEEEEECCCcceeccccCCCCC----CCCccHHHHHHHHHHHHH
Confidence 2 7899999999997655432100 001135677788887654
No 49
>PLN02442 S-formylglutathione hydrolase
Probab=99.80 E-value=5.6e-18 Score=135.81 Aligned_cols=202 Identities=16% Similarity=0.176 Sum_probs=129.4
Q ss_pred CceEEEeecCC--CCCCeEEEEEcCccCCCcchHH---HHHHHHHhcCcEEEEeccC-CCCCcc-CCC----Cccc----
Q 025842 29 GLNTYVTGSGP--PDSKSAILLISDVFGYEAPLFR---KLADKVAGAGFLVVAPDFF-YGDPIV-DLN----NPQF---- 93 (247)
Q Consensus 29 ~~~~~~~~p~~--~~~~~~vv~~hgg~g~~~~~~~---~~a~~la~~G~~v~~~d~~-~g~~~~-~~~----~~~~---- 93 (247)
.+..+++.|+. .++.|.|+++||+.+. ...+. .+...++..||.|+.||.. +|.... ... ....
T Consensus 31 ~~~~~vy~P~~~~~~~~Pvv~~lHG~~~~-~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~~~ 109 (283)
T PLN02442 31 SMTFSVYFPPASDSGKVPVLYWLSGLTCT-DENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGAGFYL 109 (283)
T ss_pred ceEEEEEcCCcccCCCCCEEEEecCCCcC-hHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCcceee
Confidence 46777777752 3457888999965543 33332 2446667789999999986 552110 000 0000
Q ss_pred --chHHHHhhcCCccccchHHHHHHHH-HhcCCCeEEEEEecccHHHHHHhhcCC--CccEEEEecCCCCCc--------
Q 025842 94 --DREAWRKIHNTDKGYVDAKSVIAAL-KSKGVSAIGAAGFCWGGVVAAKLASSH--DIQAAVVLHPGAITV-------- 160 (247)
Q Consensus 94 --~~~~~~~~~~~~~~~~d~~~~i~~l-~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~~~~~~~-------- 160 (247)
....|..........+++...++.. ...+.++++++|+||||.+++.++.++ .++++++++|.....
T Consensus 110 ~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 189 (283)
T PLN02442 110 NATQEKWKNWRMYDYVVKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIANPINCPWGQKA 189 (283)
T ss_pred ccccCCCcccchhhhHHHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCccCcccCchhhHH
Confidence 0000000000011223444444433 234778999999999999999988654 788888888775210
Q ss_pred ---------------------cccccccccEEEeecCCCCCCCHH-HHHHHHHHHHhccCCCeeEEEeCCCCccccccCC
Q 025842 161 ---------------------DDINEIKVPVAILGAEIDHVSPPE-DLKRFGEILSAKLKNDCLVKIYPRVSHGWTVRYN 218 (247)
Q Consensus 161 ---------------------~~~~~~~~P~l~i~g~~D~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~H~~~~~~~ 218 (247)
..+...++|+++++|++|++++.. ..+.+.+.+ ++.|.++++.+++|.+|.|..
T Consensus 190 ~~~~~g~~~~~~~~~d~~~~~~~~~~~~~pvli~~G~~D~~v~~~~~s~~~~~~l-~~~g~~~~~~~~pg~~H~~~~--- 265 (283)
T PLN02442 190 FTNYLGSDKADWEEYDATELVSKFNDVSATILIDQGEADKFLKEQLLPENFEEAC-KEAGAPVTLRLQPGYDHSYFF--- 265 (283)
T ss_pred HHHHcCCChhhHHHcChhhhhhhccccCCCEEEEECCCCccccccccHHHHHHHH-HHcCCCeEEEEeCCCCccHHH---
Confidence 012235789999999999999864 467888888 567788999999999999753
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHhc
Q 025842 219 VEDEFAVKSAEEAHEDMINWLTKYVK 244 (247)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~fl~~~~~ 244 (247)
....+++.+.|..++++
T Consensus 266 ---------~~~~i~~~~~~~~~~~~ 282 (283)
T PLN02442 266 ---------IATFIDDHINHHAQALK 282 (283)
T ss_pred ---------HHHHHHHHHHHHHHHhc
Confidence 45666777788877765
No 50
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.80 E-value=2.1e-18 Score=135.41 Aligned_cols=160 Identities=11% Similarity=0.088 Sum_probs=112.5
Q ss_pred CeEEEEEcCccCCCcchHHHHHHHHHhcCcEEEEeccC-CCCCccCCCCcccchHHHHhhcCCccccchHHHHHHHHHhc
Q 025842 43 KSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSK 121 (247)
Q Consensus 43 ~~~vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~ 121 (247)
.|+|||+||. +.+...|..+++.| + +|.|+++|+| +|.+. .+.. .++. ...+|+.++++ +.
T Consensus 2 ~p~vvllHG~-~~~~~~w~~~~~~l-~-~~~vi~~D~~G~G~S~-~~~~--~~~~---------~~~~~l~~~l~---~~ 63 (242)
T PRK11126 2 LPWLVFLHGL-LGSGQDWQPVGEAL-P-DYPRLYIDLPGHGGSA-AISV--DGFA---------DVSRLLSQTLQ---SY 63 (242)
T ss_pred CCEEEEECCC-CCChHHHHHHHHHc-C-CCCEEEecCCCCCCCC-Cccc--cCHH---------HHHHHHHHHHH---Hc
Confidence 4679999955 54567889999988 3 6999999998 77765 2221 1222 22245544444 44
Q ss_pred CCCeEEEEEecccHHHHHHhhcCC---CccEEEEecCCCC----------------------------------------
Q 025842 122 GVSAIGAAGFCWGGVVAAKLASSH---DIQAAVVLHPGAI---------------------------------------- 158 (247)
Q Consensus 122 ~~~~i~l~G~S~Gg~~a~~~a~~~---~i~~~v~~~~~~~---------------------------------------- 158 (247)
+.+++.++||||||.+++.+|.+. +++++++.++...
T Consensus 64 ~~~~~~lvG~S~Gg~va~~~a~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (242)
T PRK11126 64 NILPYWLVGYSLGGRIAMYYACQGLAGGLCGLIVEGGNPGLQNAEERQARWQNDRQWAQRFRQEPLEQVLADWYQQPVFA 143 (242)
T ss_pred CCCCeEEEEECHHHHHHHHHHHhCCcccccEEEEeCCCCCCCCHHHHHHHHhhhHHHHHHhccCcHHHHHHHHHhcchhh
Confidence 678999999999999999988543 4999888654320
Q ss_pred ---C---------------------------------ccccccccccEEEeecCCCCCCCHHHHHHHHHHHHhccCCCee
Q 025842 159 ---T---------------------------------VDDINEIKVPVAILGAEIDHVSPPEDLKRFGEILSAKLKNDCL 202 (247)
Q Consensus 159 ---~---------------------------------~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~ 202 (247)
. ...+.++++|+++++|++|+.+. .+.+.. +.+
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-----~~~~~~------~~~ 212 (242)
T PRK11126 144 SLNAEQRQQLVAKRSNNNGAAVAAMLEATSLAKQPDLRPALQALTFPFYYLCGERDSKFQ-----ALAQQL------ALP 212 (242)
T ss_pred ccCccHHHHHHHhcccCCHHHHHHHHHhcCcccCCcHHHHhhccCCCeEEEEeCCcchHH-----HHHHHh------cCe
Confidence 0 01234678999999999998542 222221 578
Q ss_pred EEEeCCCCccccccCCCCChHHHHHHHHHHHHHHHHHHH
Q 025842 203 VKIYPRVSHGWTVRYNVEDEFAVKSAEEAHEDMINWLTK 241 (247)
Q Consensus 203 ~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~ 241 (247)
+++++++||.+... .+++..+.+.+||++
T Consensus 213 ~~~i~~~gH~~~~e----------~p~~~~~~i~~fl~~ 241 (242)
T PRK11126 213 LHVIPNAGHNAHRE----------NPAAFAASLAQILRL 241 (242)
T ss_pred EEEeCCCCCchhhh----------ChHHHHHHHHHHHhh
Confidence 99999999987764 467889999999874
No 51
>PRK06489 hypothetical protein; Provisional
Probab=99.80 E-value=3.1e-18 Score=142.17 Aligned_cols=192 Identities=19% Similarity=0.214 Sum_probs=123.9
Q ss_pred ecCceEEEeecCCCCC-------CeEEEEEcCccCCCcchHH--HHHHHHH-------hcCcEEEEeccC-CCCCccCCC
Q 025842 27 LGGLNTYVTGSGPPDS-------KSAILLISDVFGYEAPLFR--KLADKVA-------GAGFLVVAPDFF-YGDPIVDLN 89 (247)
Q Consensus 27 ~~~~~~~~~~p~~~~~-------~~~vv~~hgg~g~~~~~~~--~~a~~la-------~~G~~v~~~d~~-~g~~~~~~~ 89 (247)
.+++..++.... ++. .|+|||+||+.+. ...|. .+.+.|. .++|.|+++|++ ||.|. .+.
T Consensus 47 ~~g~~i~y~~~G-~~~~~~~~~~gpplvllHG~~~~-~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~-~p~ 123 (360)
T PRK06489 47 LPELRLHYTTLG-TPHRNADGEIDNAVLVLHGTGGS-GKSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSS-KPS 123 (360)
T ss_pred cCCceEEEEecC-CCCcccccCCCCeEEEeCCCCCc-hhhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCC-CCC
Confidence 456777776422 112 5789999966554 33443 4555542 467999999999 88765 232
Q ss_pred Ccc-cchHHHHhhcCCccccchHHHHHHHH-HhcCCCeEE-EEEecccHHHHHHhhcCC--CccEEEEecCCCC------
Q 025842 90 NPQ-FDREAWRKIHNTDKGYVDAKSVIAAL-KSKGVSAIG-AAGFCWGGVVAAKLASSH--DIQAAVVLHPGAI------ 158 (247)
Q Consensus 90 ~~~-~~~~~~~~~~~~~~~~~d~~~~i~~l-~~~~~~~i~-l~G~S~Gg~~a~~~a~~~--~i~~~v~~~~~~~------ 158 (247)
... .... .++.+..++++ ++.+ ...+.+++. ++||||||++++.+|.++ +|+++|++++...
T Consensus 124 ~~~~~~~~----~~~~~~~a~~~---~~~l~~~lgi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~~~~~~~~~ 196 (360)
T PRK06489 124 DGLRAAFP----RYDYDDMVEAQ---YRLVTEGLGVKHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQPTEMSGRN 196 (360)
T ss_pred cCCCCCCC----cccHHHHHHHH---HHHHHHhcCCCceeEEEEECHHHHHHHHHHHhCchhhheeeeeccCcccccHHH
Confidence 210 0000 01111112233 3333 334666775 899999999999988554 7888887654210
Q ss_pred --------------------------------------------------C-----------------------------
Q 025842 159 --------------------------------------------------T----------------------------- 159 (247)
Q Consensus 159 --------------------------------------------------~----------------------------- 159 (247)
.
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (360)
T PRK06489 197 WMWRRMLIESIRNDPAWNNGNYTTQPPSLKRANPMFAIATSGGTLAYQAQAPTRAAADKLVDERLAAPVTADANDFLYQW 276 (360)
T ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHhcCChHHHHHHHHHHHHhhhhcCHHHHHHHH
Confidence 0
Q ss_pred --------ccccccccccEEEeecCCCCCCCHHHH--HHHHHHHHhccCCCeeEEEeCCC----CccccccCCCCChHHH
Q 025842 160 --------VDDINEIKVPVAILGAEIDHVSPPEDL--KRFGEILSAKLKNDCLVKIYPRV----SHGWTVRYNVEDEFAV 225 (247)
Q Consensus 160 --------~~~~~~~~~P~l~i~g~~D~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~----~H~~~~~~~~~~~~~~ 225 (247)
...+.++++|+|+++|++|.++|.+.. +.+.+.++ +.++++++++ ||... .
T Consensus 277 ~~~~~~d~~~~L~~I~~PvLvI~G~~D~~~p~~~~~~~~la~~ip-----~a~l~~i~~a~~~~GH~~~-e--------- 341 (360)
T PRK06489 277 DSSRDYNPSPDLEKIKAPVLAINSADDERNPPETGVMEAALKRVK-----HGRLVLIPASPETRGHGTT-G--------- 341 (360)
T ss_pred HHhhccChHHHHHhCCCCEEEEecCCCcccChhhHHHHHHHHhCc-----CCeEEEECCCCCCCCcccc-c---------
Confidence 001345789999999999999998875 67777774 6789999985 99864 2
Q ss_pred HHHHHHHHHHHHHHHHHhc
Q 025842 226 KSAEEAHEDMINWLTKYVK 244 (247)
Q Consensus 226 ~~~~~~~~~~~~fl~~~~~ 244 (247)
.++++.+.+.+||++..+
T Consensus 342 -~P~~~~~~i~~FL~~~~~ 359 (360)
T PRK06489 342 -SAKFWKAYLAEFLAQVPK 359 (360)
T ss_pred -CHHHHHHHHHHHHHhccc
Confidence 367889999999987644
No 52
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.80 E-value=1.8e-18 Score=135.20 Aligned_cols=165 Identities=16% Similarity=0.249 Sum_probs=112.2
Q ss_pred eEEEEEcCccCCCcchHHHHHHHHHhcCcEEEEeccC-CCCCccCCCC-cccchHHHHhhcCCccccchHHHHHHHH-Hh
Q 025842 44 SAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNN-PQFDREAWRKIHNTDKGYVDAKSVIAAL-KS 120 (247)
Q Consensus 44 ~~vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~~-~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~~~~i~~l-~~ 120 (247)
|+||++||. +.+...|..+++.|+ +||.|+++|++ +|.+. .+.. ...+. + +.+..++..+ +.
T Consensus 2 ~~vv~~hG~-~~~~~~~~~~~~~L~-~~~~v~~~d~~g~G~s~-~~~~~~~~~~---------~---~~~~~~~~~~~~~ 66 (251)
T TIGR03695 2 PVLVFLHGF-LGSGADWQALIELLG-PHFRCLAIDLPGHGSSQ-SPDEIERYDF---------E---EAAQDILATLLDQ 66 (251)
T ss_pred CEEEEEcCC-CCchhhHHHHHHHhc-ccCeEEEEcCCCCCCCC-CCCccChhhH---------H---HHHHHHHHHHHHH
Confidence 679999955 545678899999997 89999999998 66654 2211 11111 1 1122213222 23
Q ss_pred cCCCeEEEEEecccHHHHHHhhcCC--CccEEEEecCCCCC---------------------------------------
Q 025842 121 KGVSAIGAAGFCWGGVVAAKLASSH--DIQAAVVLHPGAIT--------------------------------------- 159 (247)
Q Consensus 121 ~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~~~~~~--------------------------------------- 159 (247)
.+.+++.++|||+||.+++.++... .+++++++++....
T Consensus 67 ~~~~~~~l~G~S~Gg~ia~~~a~~~~~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (251)
T TIGR03695 67 LGIEPFFLVGYSMGGRIALYYALQYPERVQGLILESGSPGLATEEERAARRQNDEQLAQRFEQEGLEAFLDDWYQQPLFA 146 (251)
T ss_pred cCCCeEEEEEeccHHHHHHHHHHhCchheeeeEEecCCCCcCchHhhhhhhhcchhhhhHHHhcCccHHHHHHhcCceee
Confidence 3667999999999999999988554 78888887654200
Q ss_pred ----------------------------------------ccccccccccEEEeecCCCCCCCHHHHHHHHHHHHhccCC
Q 025842 160 ----------------------------------------VDDINEIKVPVAILGAEIDHVSPPEDLKRFGEILSAKLKN 199 (247)
Q Consensus 160 ----------------------------------------~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~l~~~~~~ 199 (247)
...+..+++|+++++|++|..++ +..+.+.+.+ .
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~-~~~~~~~~~~-----~ 220 (251)
T TIGR03695 147 SQKNLPPEQRQALRAKRLANNPEGLAKMLRATGLGKQPSLWPKLQALTIPVLYLCGEKDEKFV-QIAKEMQKLL-----P 220 (251)
T ss_pred ecccCChHHhHHHHHhcccccchHHHHHHHHhhhhcccchHHHhhCCCCceEEEeeCcchHHH-HHHHHHHhcC-----C
Confidence 00134578899999999998763 3344444433 2
Q ss_pred CeeEEEeCCCCccccccCCCCChHHHHHHHHHHHHHHHHH
Q 025842 200 DCLVKIYPRVSHGWTVRYNVEDEFAVKSAEEAHEDMINWL 239 (247)
Q Consensus 200 ~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl 239 (247)
+.+++.+++++|..... ..+++.+.+.+||
T Consensus 221 ~~~~~~~~~~gH~~~~e----------~~~~~~~~i~~~l 250 (251)
T TIGR03695 221 NLTLVIIANAGHNIHLE----------NPEAFAKILLAFL 250 (251)
T ss_pred CCcEEEEcCCCCCcCcc----------ChHHHHHHHHHHh
Confidence 67899999999987664 3467888888887
No 53
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.80 E-value=9.8e-18 Score=133.91 Aligned_cols=181 Identities=18% Similarity=0.136 Sum_probs=121.4
Q ss_pred cCceEEEeecCCCCCCeEEEEEcCccCCCcchHHHHHHHHHhcCcEEEEeccC-CCCCccCCCCcccchHHHHhhcCCcc
Q 025842 28 GGLNTYVTGSGPPDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDK 106 (247)
Q Consensus 28 ~~~~~~~~~p~~~~~~~~vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~~-~g~~~~~~~~~~~~~~~~~~~~~~~~ 106 (247)
+|-+.+.. ++.+.+|+|||+||. +.+...|..++..|.++||.|+++|++ +|.+. .......++.
T Consensus 5 ~~~~~~~~--~~~~~~p~vvliHG~-~~~~~~w~~~~~~L~~~g~~vi~~dl~g~G~s~-~~~~~~~~~~---------- 70 (273)
T PLN02211 5 NGEEVTDM--KPNRQPPHFVLIHGI-SGGSWCWYKIRCLMENSGYKVTCIDLKSAGIDQ-SDADSVTTFD---------- 70 (273)
T ss_pred cccccccc--cccCCCCeEEEECCC-CCCcCcHHHHHHHHHhCCCEEEEecccCCCCCC-CCcccCCCHH----------
Confidence 34444444 344456889999954 445568889999998899999999998 77543 1111112222
Q ss_pred ccchHHHHHHHHHhcC-CCeEEEEEecccHHHHHHhhcCC--CccEEEEecCCCC-------------------------
Q 025842 107 GYVDAKSVIAALKSKG-VSAIGAAGFCWGGVVAAKLASSH--DIQAAVVLHPGAI------------------------- 158 (247)
Q Consensus 107 ~~~d~~~~i~~l~~~~-~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~~~~~------------------------- 158 (247)
.++..+.+.+++.. .++++++||||||.++..++... +|+++|.+++...
T Consensus 71 --~~~~~l~~~i~~l~~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 148 (273)
T PLN02211 71 --EYNKPLIDFLSSLPENEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAATMLKLGFQTDEDMKDGVPDLSEFGDVYE 148 (273)
T ss_pred --HHHHHHHHHHHhcCCCCCEEEEEECchHHHHHHHHHhChhheeEEEEeccccCCCCCCHHHHHhccccchhhhcccee
Confidence 22334455555543 47999999999999999987543 6777777644210
Q ss_pred -----------C--------------------------------------c----cccccc-cccEEEeecCCCCCCCHH
Q 025842 159 -----------T--------------------------------------V----DDINEI-KVPVAILGAEIDHVSPPE 184 (247)
Q Consensus 159 -----------~--------------------------------------~----~~~~~~-~~P~l~i~g~~D~~~~~~ 184 (247)
. . ....++ ++|+++|.|++|..+|++
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~l~I~g~~D~~ip~~ 228 (273)
T PLN02211 149 LGFGLGPDQPPTSAIIKKEFRRKILYQMSPQEDSTLAAMLLRPGPILALRSARFEEETGDIDKVPRVYIKTLHDHVVKPE 228 (273)
T ss_pred eeeccCCCCCCceeeeCHHHHHHHHhcCCCHHHHHHHHHhcCCcCccccccccccccccccCccceEEEEeCCCCCCCHH
Confidence 0 0 001123 679999999999999999
Q ss_pred HHHHHHHHHHhccCCCeeEEEeCCCCccccccCCCCChHHHHHHHHHHHHHHHHHH
Q 025842 185 DLKRFGEILSAKLKNDCLVKIYPRVSHGWTVRYNVEDEFAVKSAEEAHEDMINWLT 240 (247)
Q Consensus 185 ~~~~~~~~l~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~ 240 (247)
..+.+.+.++ ..+++.++ +||..... .++++.+.+.+...
T Consensus 229 ~~~~m~~~~~-----~~~~~~l~-~gH~p~ls----------~P~~~~~~i~~~a~ 268 (273)
T PLN02211 229 QQEAMIKRWP-----PSQVYELE-SDHSPFFS----------TPFLLFGLLIKAAA 268 (273)
T ss_pred HHHHHHHhCC-----ccEEEEEC-CCCCcccc----------CHHHHHHHHHHHHH
Confidence 9999998873 44788887 79986653 45666666665543
No 54
>PLN02872 triacylglycerol lipase
Probab=99.79 E-value=1.5e-18 Score=144.23 Aligned_cols=190 Identities=17% Similarity=0.126 Sum_probs=126.9
Q ss_pred CCeEEEEEcCccCCCcchH------HHHHHHHHhcCcEEEEeccC-CCCCccCCCCcccchHHHHhhcCCcccc-chHHH
Q 025842 42 SKSAILLISDVFGYEAPLF------RKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKGY-VDAKS 113 (247)
Q Consensus 42 ~~~~vv~~hgg~g~~~~~~------~~~a~~la~~G~~v~~~d~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~~ 113 (247)
.+++||++||..+.. ..| ..++..|+++||.|+++|.| ++.+.............|. .+.+... .|+.+
T Consensus 73 ~~~~Vll~HGl~~ss-~~w~~~~~~~sla~~La~~GydV~l~n~RG~~~s~gh~~~~~~~~~fw~--~s~~e~a~~Dl~a 149 (395)
T PLN02872 73 RGPPVLLQHGLFMAG-DAWFLNSPEQSLGFILADHGFDVWVGNVRGTRWSYGHVTLSEKDKEFWD--WSWQELALYDLAE 149 (395)
T ss_pred CCCeEEEeCcccccc-cceeecCcccchHHHHHhCCCCcccccccccccccCCCCCCccchhccC--CcHHHHHHHHHHH
Confidence 357899999655432 332 45777899999999999997 4433211111111111111 1222222 79999
Q ss_pred HHHHHHhcCCCeEEEEEecccHHHHHHhhcCC----CccEEEEecCCC--------------------------------
Q 025842 114 VIAALKSKGVSAIGAAGFCWGGVVAAKLASSH----DIQAAVVLHPGA-------------------------------- 157 (247)
Q Consensus 114 ~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~----~i~~~v~~~~~~-------------------------------- 157 (247)
+++++.+...+++.++|||+||.+++.++..+ +|+.+++++|..
T Consensus 150 ~id~i~~~~~~~v~~VGhS~Gg~~~~~~~~~p~~~~~v~~~~~l~P~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 229 (395)
T PLN02872 150 MIHYVYSITNSKIFIVGHSQGTIMSLAALTQPNVVEMVEAAALLCPISYLDHVTAPLVLRMVFMHLDQMVVAMGIHQLNF 229 (395)
T ss_pred HHHHHHhccCCceEEEEECHHHHHHHHHhhChHHHHHHHHHHHhcchhhhccCCCHHHHHHHHHhHHHHHHHhcCceecC
Confidence 99999876558999999999999988655433 344444433332
Q ss_pred --------------------------------------------------------------------------------
Q 025842 158 -------------------------------------------------------------------------------- 157 (247)
Q Consensus 158 -------------------------------------------------------------------------------- 157 (247)
T Consensus 230 ~~~~~~~~~~~~C~~~~~c~~~~~~~~g~~~~~n~~~~~~~~~~~pagtS~k~~~H~~Q~~~s~~f~~yDyg~~~n~~~Y 309 (395)
T PLN02872 230 RSDVLVKLLDSICEGHMDCNDLLTSITGTNCCFNASRIDYYLEYEPHPSSVKNLRHLFQMIRKGTFAHYDYGIFKNLKLY 309 (395)
T ss_pred CcHHHHHHHHHHccCchhHHHHHHHHhCCCcccchhhhhHHHhcCCCcchHHHHHHHHHHHhcCCcccCCCCchhhHHHh
Confidence
Q ss_pred ----CCccccccc--cccEEEeecCCCCCCCHHHHHHHHHHHHhccCCCeeEEEeCCCCccccccCCCCChHHHHHHHHH
Q 025842 158 ----ITVDDINEI--KVPVAILGAEIDHVSPPEDLKRFGEILSAKLKNDCLVKIYPRVSHGWTVRYNVEDEFAVKSAEEA 231 (247)
Q Consensus 158 ----~~~~~~~~~--~~P~l~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~ 231 (247)
.+.-++.++ ++|+++++|++|.+++.+.++.+.+.++. ..+++.+++.+|.-..... +..+++
T Consensus 310 g~~~pP~Y~l~~i~~~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp~----~~~l~~l~~~gH~dfi~~~-------eape~V 378 (395)
T PLN02872 310 GQVNPPAFDLSLIPKSLPLWMGYGGTDGLADVTDVEHTLAELPS----KPELLYLENYGHIDFLLST-------SAKEDV 378 (395)
T ss_pred CCCCCCCcCcccCCCCccEEEEEcCCCCCCCHHHHHHHHHHCCC----ccEEEEcCCCCCHHHHhCc-------chHHHH
Confidence 011145566 57999999999999999999999998842 2578889999996322222 257889
Q ss_pred HHHHHHHHHHHhcc
Q 025842 232 HEDMINWLTKYVKR 245 (247)
Q Consensus 232 ~~~~~~fl~~~~~~ 245 (247)
++.+++||+++.+.
T Consensus 379 ~~~Il~fL~~~~~~ 392 (395)
T PLN02872 379 YNHMIQFFRSLGKS 392 (395)
T ss_pred HHHHHHHHHHhhhc
Confidence 99999999987653
No 55
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.79 E-value=5.3e-18 Score=141.36 Aligned_cols=183 Identities=20% Similarity=0.289 Sum_probs=123.5
Q ss_pred EEeecCceEEEeecCCCCCCeEEEEEcCccCCCcchHHHHHHHHHhcCcEEEEeccC-CCCCccCCCCcccchHHHHhhc
Q 025842 24 VQQLGGLNTYVTGSGPPDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIH 102 (247)
Q Consensus 24 ~~~~~~~~~~~~~p~~~~~~~~vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~~-~g~~~~~~~~~~~~~~~~~~~~ 102 (247)
...+++...++.. ...+..++|||+|| ++.+...|..++..|.. +|.|+++|++ +|.+. ......+..
T Consensus 113 ~~~~~~~~i~~~~-~g~~~~~~vl~~HG-~~~~~~~~~~~~~~l~~-~~~v~~~d~~g~G~s~--~~~~~~~~~------ 181 (371)
T PRK14875 113 KARIGGRTVRYLR-LGEGDGTPVVLIHG-FGGDLNNWLFNHAALAA-GRPVIALDLPGHGASS--KAVGAGSLD------ 181 (371)
T ss_pred cceEcCcEEEEec-ccCCCCCeEEEECC-CCCccchHHHHHHHHhc-CCEEEEEcCCCCCCCC--CCCCCCCHH------
Confidence 3445555555542 22234678999994 55556778888888865 5999999998 77653 111111211
Q ss_pred CCccccchHHHHHHHHHhcCCCeEEEEEecccHHHHHHhhcCC--CccEEEEecCCCCC---------------------
Q 025842 103 NTDKGYVDAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLASSH--DIQAAVVLHPGAIT--------------------- 159 (247)
Q Consensus 103 ~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~~~~~~--------------------- 159 (247)
..+..+.+.+...+..+++++|||+||.+++.+|... ++++++++++....
T Consensus 182 ------~~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (371)
T PRK14875 182 ------ELAAAVLAFLDALGIERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAGLGPEINGDYIDGFVAAESRRELK 255 (371)
T ss_pred ------HHHHHHHHHHHhcCCccEEEEeechHHHHHHHHHHhCchheeEEEEECcCCcCcccchhHHHHhhcccchhHHH
Confidence 1122333344445777999999999999999987543 89999988764200
Q ss_pred ---------------------------------------------------ccccccccccEEEeecCCCCCCCHHHHHH
Q 025842 160 ---------------------------------------------------VDDINEIKVPVAILGAEIDHVSPPEDLKR 188 (247)
Q Consensus 160 ---------------------------------------------------~~~~~~~~~P~l~i~g~~D~~~~~~~~~~ 188 (247)
...+.++++|+|+++|++|.++|.+..+.
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~vp~~~~~~ 335 (371)
T PRK14875 256 PVLELLFADPALVTRQMVEDLLKYKRLDGVDDALRALADALFAGGRQRVDLRDRLASLAIPVLVIWGEQDRIIPAAHAQG 335 (371)
T ss_pred HHHHHHhcChhhCCHHHHHHHHHHhccccHHHHHHHHHHHhccCcccchhHHHHHhcCCCCEEEEEECCCCccCHHHHhh
Confidence 00234578999999999999999776543
Q ss_pred HHHHHHhccCCCeeEEEeCCCCccccccCCCCChHHHHHHHHHHHHHHHHHHH
Q 025842 189 FGEILSAKLKNDCLVKIYPRVSHGWTVRYNVEDEFAVKSAEEAHEDMINWLTK 241 (247)
Q Consensus 189 ~~~~l~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~ 241 (247)
+.. ..++.+++++||.+... ..+++.+.+.+||++
T Consensus 336 l~~--------~~~~~~~~~~gH~~~~e----------~p~~~~~~i~~fl~~ 370 (371)
T PRK14875 336 LPD--------GVAVHVLPGAGHMPQME----------AAADVNRLLAEFLGK 370 (371)
T ss_pred ccC--------CCeEEEeCCCCCChhhh----------CHHHHHHHHHHHhcc
Confidence 321 56889999999987653 456788888888864
No 56
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.79 E-value=7.8e-19 Score=144.85 Aligned_cols=184 Identities=18% Similarity=0.267 Sum_probs=126.2
Q ss_pred ecCceEEEeecCCCCCCeEEEEEcCccCCCcc-----------hHHHHHH---HHHhcCcEEEEeccC-CCCCccCCCCc
Q 025842 27 LGGLNTYVTGSGPPDSKSAILLISDVFGYEAP-----------LFRKLAD---KVAGAGFLVVAPDFF-YGDPIVDLNNP 91 (247)
Q Consensus 27 ~~~~~~~~~~p~~~~~~~~vv~~hgg~g~~~~-----------~~~~~a~---~la~~G~~v~~~d~~-~g~~~~~~~~~ 91 (247)
.+++..++....+ ..+++||+||+++.+.. +|..+.. .|..++|.|+++|+| +|.+. +.
T Consensus 43 ~~~~~l~y~~~G~--~~~p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~--~~-- 116 (343)
T PRK08775 43 LEDLRLRYELIGP--AGAPVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGADGSL--DV-- 116 (343)
T ss_pred CCCceEEEEEecc--CCCCEEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCCCCCC--CC--
Confidence 3567777663221 23468888888876543 5776665 565557999999998 55432 11
Q ss_pred ccchHHHHhhcCCccccchHHHHHHHHHhcCCCe-EEEEEecccHHHHHHhhcCC--CccEEEEecCCCC----------
Q 025842 92 QFDREAWRKIHNTDKGYVDAKSVIAALKSKGVSA-IGAAGFCWGGVVAAKLASSH--DIQAAVVLHPGAI---------- 158 (247)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~-i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~~~~~---------- 158 (247)
..+. +..++|+.++++. .+.++ +.++||||||++++.+|.++ +|+++|++++...
T Consensus 117 ~~~~---------~~~a~dl~~ll~~---l~l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~~~~~~~~~~~~ 184 (343)
T PRK08775 117 PIDT---------ADQADAIALLLDA---LGIARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAHRAHPYAAAWRA 184 (343)
T ss_pred CCCH---------HHHHHHHHHHHHH---cCCCcceEEEEECHHHHHHHHHHHHChHhhheEEEECccccCCHHHHHHHH
Confidence 1111 1223555555554 46555 47999999999999988654 7888887754210
Q ss_pred ------------------------------------------C-------------------------------------
Q 025842 159 ------------------------------------------T------------------------------------- 159 (247)
Q Consensus 159 ------------------------------------------~------------------------------------- 159 (247)
.
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 264 (343)
T PRK08775 185 LQRRAVALGQLQCAEKHGLALARQLAMLSYRTPEEFEERFDAPPEVINGRVRVAAEDYLDAAGAQYVARTPVNAYLRLSE 264 (343)
T ss_pred HHHHHHHcCCCCCCchhHHHHHHHHHHHHcCCHHHHHHHhCCCccccCCCccchHHHHHHHHHHHHHHhcChhHHHHHHH
Confidence 0
Q ss_pred -----ccccccccccEEEeecCCCCCCCHHHHHHHHHHHHhccCCCeeEEEeCC-CCccccccCCCCChHHHHHHHHHHH
Q 025842 160 -----VDDINEIKVPVAILGAEIDHVSPPEDLKRFGEILSAKLKNDCLVKIYPR-VSHGWTVRYNVEDEFAVKSAEEAHE 233 (247)
Q Consensus 160 -----~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~H~~~~~~~~~~~~~~~~~~~~~~ 233 (247)
...+.++++|+|+++|++|.++|.+..+.+.+.+. + +.+++++++ +||..... .++++.+
T Consensus 265 ~~~~~~~~l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~--p--~a~l~~i~~~aGH~~~lE----------~Pe~~~~ 330 (343)
T PRK08775 265 SIDLHRVDPEAIRVPTVVVAVEGDRLVPLADLVELAEGLG--P--RGSLRVLRSPYGHDAFLK----------ETDRIDA 330 (343)
T ss_pred HHhhcCCChhcCCCCeEEEEeCCCEeeCHHHHHHHHHHcC--C--CCeEEEEeCCccHHHHhc----------CHHHHHH
Confidence 00134567899999999999999998888888772 1 578999984 89987764 5688999
Q ss_pred HHHHHHHHH
Q 025842 234 DMINWLTKY 242 (247)
Q Consensus 234 ~~~~fl~~~ 242 (247)
.+.+||.+.
T Consensus 331 ~l~~FL~~~ 339 (343)
T PRK08775 331 ILTTALRST 339 (343)
T ss_pred HHHHHHHhc
Confidence 999999754
No 57
>PRK07581 hypothetical protein; Validated
Probab=99.79 E-value=2.6e-18 Score=141.57 Aligned_cols=199 Identities=13% Similarity=0.130 Sum_probs=129.6
Q ss_pred eecCceEEEeecCCC-CCCeEEEEEcCccCCCcchHHHHH---HHHHhcCcEEEEeccC-CCCCccCCCCc--ccchHHH
Q 025842 26 QLGGLNTYVTGSGPP-DSKSAILLISDVFGYEAPLFRKLA---DKVAGAGFLVVAPDFF-YGDPIVDLNNP--QFDREAW 98 (247)
Q Consensus 26 ~~~~~~~~~~~p~~~-~~~~~vv~~hgg~g~~~~~~~~~a---~~la~~G~~v~~~d~~-~g~~~~~~~~~--~~~~~~~ 98 (247)
+++++..++....+. ...+++|++|||++++...+..+. +.|...+|.|+++|++ +|.|. .+... ..+...
T Consensus 22 ~~~~~~l~y~~~G~~~~~~~~~vll~~~~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~-~~~~~~~~~~~~~- 99 (339)
T PRK07581 22 TLPDARLAYKTYGTLNAAKDNAILYPTWYSGTHQDNEWLIGPGRALDPEKYFIIIPNMFGNGLSS-SPSNTPAPFNAAR- 99 (339)
T ss_pred CcCCceEEEEecCccCCCCCCEEEEeCCCCCCcccchhhccCCCccCcCceEEEEecCCCCCCCC-CCCCCCCCCCCCC-
Confidence 456677766643321 123455666667776555554433 3676678999999999 77765 23221 111000
Q ss_pred HhhcCCccccchHHHHHHHHH-hcCCCeE-EEEEecccHHHHHHhhcCC--CccEEEEecCCCC----------------
Q 025842 99 RKIHNTDKGYVDAKSVIAALK-SKGVSAI-GAAGFCWGGVVAAKLASSH--DIQAAVVLHPGAI---------------- 158 (247)
Q Consensus 99 ~~~~~~~~~~~d~~~~i~~l~-~~~~~~i-~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~~~~~---------------- 158 (247)
.......+|+.+....+. .++.+++ .++||||||++++.+|.++ +|+++|++++...
T Consensus 100 ---~~~~~~~~~~~~~~~~l~~~lgi~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~~~~~~~~~~~~~~~~~l 176 (339)
T PRK07581 100 ---FPHVTIYDNVRAQHRLLTEKFGIERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTAKTTPHNFVFLEGLKAAL 176 (339)
T ss_pred ---CCceeHHHHHHHHHHHHHHHhCCCceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCCCCCHHHHHHHHHHHHHH
Confidence 000112355655444343 3577884 7999999999999998655 7777776632110
Q ss_pred ----------------------------------------------------------------C---------------
Q 025842 159 ----------------------------------------------------------------T--------------- 159 (247)
Q Consensus 159 ----------------------------------------------------------------~--------------- 159 (247)
.
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 256 (339)
T PRK07581 177 TADPAFNGGWYAEPPERGLRAHARVYAGWGFSQAFYRQELWRAMGYASLEDFLVGFWEGNFLPRDPNNLLAMLWTWQRGD 256 (339)
T ss_pred HhCCCCCCCCCCCcHHHHHHHHHHHHHHHHhHHHHHHhhhccccChhhHHHHHHHHHHHhhcccCcccHHHHHHHhhhcc
Confidence 0
Q ss_pred -----------ccccccccccEEEeecCCCCCCCHHHHHHHHHHHHhccCCCeeEEEeCC-CCccccccCCCCChHHHHH
Q 025842 160 -----------VDDINEIKVPVAILGAEIDHVSPPEDLKRFGEILSAKLKNDCLVKIYPR-VSHGWTVRYNVEDEFAVKS 227 (247)
Q Consensus 160 -----------~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~H~~~~~~~~~~~~~~~~ 227 (247)
...+.++++|+|+++|++|.++|.+..+.+.+.++ +.+++++++ +||..... .
T Consensus 257 ~~~~~~~~~d~~~~L~~I~~PtLvI~G~~D~~~p~~~~~~l~~~ip-----~a~l~~i~~~~GH~~~~~----------~ 321 (339)
T PRK07581 257 ISRNPAYGGDLAAALGSITAKTFVMPISTDLYFPPEDCEAEAALIP-----NAELRPIESIWGHLAGFG----------Q 321 (339)
T ss_pred cccCcccCCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCC-----CCeEEEeCCCCCcccccc----------C
Confidence 00123468899999999999999999988888774 578999998 89976553 4
Q ss_pred HHHHHHHHHHHHHHHhc
Q 025842 228 AEEAHEDMINWLTKYVK 244 (247)
Q Consensus 228 ~~~~~~~~~~fl~~~~~ 244 (247)
.+.+.+.+.+|+++.+.
T Consensus 322 ~~~~~~~~~~~~~~~~~ 338 (339)
T PRK07581 322 NPADIAFIDAALKELLA 338 (339)
T ss_pred cHHHHHHHHHHHHHHHh
Confidence 56788999999988764
No 58
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.79 E-value=3.3e-18 Score=131.84 Aligned_cols=150 Identities=23% Similarity=0.411 Sum_probs=111.0
Q ss_pred EEEEcCccCCCcchHHHHHHHHHhcCcEEEEeccC-CCCCccCCCC-cccchHHHHhhcCCccccchHHHHHHHHHhcCC
Q 025842 46 ILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNN-PQFDREAWRKIHNTDKGYVDAKSVIAALKSKGV 123 (247)
Q Consensus 46 vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~~-~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~ 123 (247)
|||+|| ++.+...|..+++.| ++||.|+++|++ +|.+. .+.. ...+. + +.+..+.+.+++.+.
T Consensus 1 vv~~hG-~~~~~~~~~~~~~~l-~~~~~v~~~d~~G~G~s~-~~~~~~~~~~---------~---~~~~~l~~~l~~~~~ 65 (228)
T PF12697_consen 1 VVFLHG-FGGSSESWDPLAEAL-ARGYRVIAFDLPGHGRSD-PPPDYSPYSI---------E---DYAEDLAELLDALGI 65 (228)
T ss_dssp EEEE-S-TTTTGGGGHHHHHHH-HTTSEEEEEECTTSTTSS-SHSSGSGGSH---------H---HHHHHHHHHHHHTTT
T ss_pred eEEECC-CCCCHHHHHHHHHHH-hCCCEEEEEecCCccccc-cccccCCcch---------h---hhhhhhhhccccccc
Confidence 789994 455568899999999 489999999998 67654 1111 11111 1 223344444555566
Q ss_pred CeEEEEEecccHHHHHHhhcC-C-CccEEEEecCCCC-------C-----------------------------------
Q 025842 124 SAIGAAGFCWGGVVAAKLASS-H-DIQAAVVLHPGAI-------T----------------------------------- 159 (247)
Q Consensus 124 ~~i~l~G~S~Gg~~a~~~a~~-~-~i~~~v~~~~~~~-------~----------------------------------- 159 (247)
+++.++|||+||.+++.++.. + .|+++|+++|... .
T Consensus 66 ~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (228)
T PF12697_consen 66 KKVILVGHSMGGMIALRLAARYPDRVKGLVLLSPPPPLPDSPSRSFGPSFIRRLLAWRSRSLRRLASRFFYRWFDGDEPE 145 (228)
T ss_dssp SSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESESSSHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHH
T ss_pred ccccccccccccccccccccccccccccceeecccccccccccccccchhhhhhhhcccccccccccccccccccccccc
Confidence 799999999999999998854 3 8999999887761 0
Q ss_pred -----------------------ccccccccccEEEeecCCCCCCCHHHHHHHHHHHHhccCCCeeEEEeCCCCccccc
Q 025842 160 -----------------------VDDINEIKVPVAILGAEIDHVSPPEDLKRFGEILSAKLKNDCLVKIYPRVSHGWTV 215 (247)
Q Consensus 160 -----------------------~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~H~~~~ 215 (247)
...+.++++|+++++|++|.+++.+..+.+.+.++ +++++++++++|....
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pvl~i~g~~D~~~~~~~~~~~~~~~~-----~~~~~~~~~~gH~~~~ 219 (228)
T PF12697_consen 146 DLIRSSRRALAEYLRSNLWQADLSEALPRIKVPVLVIHGEDDPIVPPESAEELADKLP-----NAELVVIPGAGHFLFL 219 (228)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHGSSSEEEEEEETTSSSSHHHHHHHHHHHST-----TEEEEEETTSSSTHHH
T ss_pred ccccccccccccccccccccccccccccccCCCeEEeecCCCCCCCHHHHHHHHHHCC-----CCEEEEECCCCCccHH
Confidence 01345678999999999999999888888887763 6899999999998655
No 59
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.78 E-value=3.9e-17 Score=137.03 Aligned_cols=180 Identities=21% Similarity=0.270 Sum_probs=120.2
Q ss_pred CCCCCeEEEEEcCccCCCcchHHHHHHHHHhcCcEEEEeccC-CCCCccCCCCcccchHHHHhhcCCccccc-hHHHHHH
Q 025842 39 PPDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKGYV-DAKSVIA 116 (247)
Q Consensus 39 ~~~~~~~vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-d~~~~i~ 116 (247)
+++..|+|||+||+ +.+...|...++.|++ +|.|+++|++ +|.+. .+......... ..+ -+..+.+
T Consensus 101 ~~~~~p~vvllHG~-~~~~~~~~~~~~~L~~-~~~vi~~D~rG~G~S~-~~~~~~~~~~~---------~~~~~~~~i~~ 168 (402)
T PLN02894 101 SKEDAPTLVMVHGY-GASQGFFFRNFDALAS-RFRVIAIDQLGWGGSS-RPDFTCKSTEE---------TEAWFIDSFEE 168 (402)
T ss_pred CCCCCCEEEEECCC-CcchhHHHHHHHHHHh-CCEEEEECCCCCCCCC-CCCcccccHHH---------HHHHHHHHHHH
Confidence 33456889999955 5455667777788865 5999999998 77654 22111000000 001 1223345
Q ss_pred HHHhcCCCeEEEEEecccHHHHHHhhcCC--CccEEEEecCCCCC-----------------------------------
Q 025842 117 ALKSKGVSAIGAAGFCWGGVVAAKLASSH--DIQAAVVLHPGAIT----------------------------------- 159 (247)
Q Consensus 117 ~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~~~~~~----------------------------------- 159 (247)
++...+.++++++||||||.+++.+|..+ .++++|+++|....
T Consensus 169 ~~~~l~~~~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 248 (402)
T PLN02894 169 WRKAKNLSNFILLGHSFGGYVAAKYALKHPEHVQHLILVGPAGFSSESDDKSEWLTKFRATWKGAVLNHLWESNFTPQKI 248 (402)
T ss_pred HHHHcCCCCeEEEEECHHHHHHHHHHHhCchhhcEEEEECCccccCCcchhHHHHhhcchhHHHHHHHHHhhcCCCHHHH
Confidence 55555777999999999999999988554 78887776543100
Q ss_pred ---------------------------------------------------------------------ccccccccccE
Q 025842 160 ---------------------------------------------------------------------VDDINEIKVPV 170 (247)
Q Consensus 160 ---------------------------------------------------------------------~~~~~~~~~P~ 170 (247)
...+.++++|+
T Consensus 249 ~~~~gp~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vP~ 328 (402)
T PLN02894 249 IRGLGPWGPNLVRRYTTARFGAHSTGDILSEEESKLLTDYVYHTLAAKASGELCLKYIFSFGAFARKPLLESASEWKVPT 328 (402)
T ss_pred HHhccchhHHHHHHHHHHHhhhcccccccCcchhhHHHHHHHHhhcCCCchHHHHHHhccCchhhcchHhhhcccCCCCE
Confidence 00134578899
Q ss_pred EEeecCCCCCCCHHHHHHHHHHHHhccCCCeeEEEeCCCCccccccCCCCChHHHHHHHHHHHHHHHHHHHHhcc
Q 025842 171 AILGAEIDHVSPPEDLKRFGEILSAKLKNDCLVKIYPRVSHGWTVRYNVEDEFAVKSAEEAHEDMINWLTKYVKR 245 (247)
Q Consensus 171 l~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~ 245 (247)
++++|++|.+.+ .....+.+.+ +..+++++++++||..... ..+++.+.+.+|++..+..
T Consensus 329 liI~G~~D~i~~-~~~~~~~~~~----~~~~~~~~i~~aGH~~~~E----------~P~~f~~~l~~~~~~~~~~ 388 (402)
T PLN02894 329 TFIYGRHDWMNY-EGAVEARKRM----KVPCEIIRVPQGGHFVFLD----------NPSGFHSAVLYACRKYLSP 388 (402)
T ss_pred EEEEeCCCCCCc-HHHHHHHHHc----CCCCcEEEeCCCCCeeecc----------CHHHHHHHHHHHHHHhccC
Confidence 999999998765 4444554443 2257899999999987664 4578888999998887764
No 60
>PRK11071 esterase YqiA; Provisional
Probab=99.78 E-value=1.4e-17 Score=125.60 Aligned_cols=151 Identities=18% Similarity=0.189 Sum_probs=106.0
Q ss_pred eEEEEEcCccCCCcchHH--HHHHHHHhc--CcEEEEeccCCCCCccCCCCcccchHHHHhhcCCccccchHHHHHHHHH
Q 025842 44 SAILLISDVFGYEAPLFR--KLADKVAGA--GFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALK 119 (247)
Q Consensus 44 ~~vv~~hgg~g~~~~~~~--~~a~~la~~--G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~ 119 (247)
|+||++|| ++++...|. .+...+++. +|.|+++|++ |.+. .+ .+++.++ +.
T Consensus 2 p~illlHG-f~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~-g~~~-----------~~---------~~~l~~l---~~ 56 (190)
T PRK11071 2 STLLYLHG-FNSSPRSAKATLLKNWLAQHHPDIEMIVPQLP-PYPA-----------DA---------AELLESL---VL 56 (190)
T ss_pred CeEEEECC-CCCCcchHHHHHHHHHHHHhCCCCeEEeCCCC-CCHH-----------HH---------HHHHHHH---HH
Confidence 57999994 454455565 355666553 7999999995 3211 11 1333333 33
Q ss_pred hcCCCeEEEEEecccHHHHHHhhcCCCccEEEEecCCCCC------------c-------------------cccc--cc
Q 025842 120 SKGVSAIGAAGFCWGGVVAAKLASSHDIQAAVVLHPGAIT------------V-------------------DDIN--EI 166 (247)
Q Consensus 120 ~~~~~~i~l~G~S~Gg~~a~~~a~~~~i~~~v~~~~~~~~------------~-------------------~~~~--~~ 166 (247)
+.+.+++.++|+|+||.+++.+|.....+ +|+++|.... . .++. ..
T Consensus 57 ~~~~~~~~lvG~S~Gg~~a~~~a~~~~~~-~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~i~~ 135 (190)
T PRK11071 57 EHGGDPLGLVGSSLGGYYATWLSQCFMLP-AVVVNPAVRPFELLTDYLGENENPYTGQQYVLESRHIYDLKVMQIDPLES 135 (190)
T ss_pred HcCCCCeEEEEECHHHHHHHHHHHHcCCC-EEEECCCCCHHHHHHHhcCCcccccCCCcEEEcHHHHHHHHhcCCccCCC
Confidence 44667999999999999999998765443 5667766531 0 0111 24
Q ss_pred cccEEEeecCCCCCCCHHHHHHHHHHHHhccCCCeeEEEeCCCCccccccCCCCChHHHHHHHHHHHHHHHHHH
Q 025842 167 KVPVAILGAEIDHVSPPEDLKRFGEILSAKLKNDCLVKIYPRVSHGWTVRYNVEDEFAVKSAEEAHEDMINWLT 240 (247)
Q Consensus 167 ~~P~l~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~ 240 (247)
..|++++||++|.++|.+.+.++++.. .+..++|++|.|.. .++.++.+.+|++
T Consensus 136 ~~~v~iihg~~De~V~~~~a~~~~~~~--------~~~~~~ggdH~f~~------------~~~~~~~i~~fl~ 189 (190)
T PRK11071 136 PDLIWLLQQTGDEVLDYRQAVAYYAAC--------RQTVEEGGNHAFVG------------FERYFNQIVDFLG 189 (190)
T ss_pred hhhEEEEEeCCCCcCCHHHHHHHHHhc--------ceEEECCCCcchhh------------HHHhHHHHHHHhc
Confidence 567899999999999999999999853 45677999999844 3789999999975
No 61
>PLN00021 chlorophyllase
Probab=99.78 E-value=1.6e-16 Score=128.42 Aligned_cols=197 Identities=19% Similarity=0.226 Sum_probs=133.5
Q ss_pred cCceEEEeecCCCCCCeEEEEEcCccCCCcchHHHHHHHHHhcCcEEEEeccCCCCCccCCCCcccchHHHHhhcCCccc
Q 025842 28 GGLNTYVTGSGPPDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKG 107 (247)
Q Consensus 28 ~~~~~~~~~p~~~~~~~~vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (247)
-++++.++.|...+..|+||++||+. .+...|..++++|+++||.|+++|++ +... ..... .
T Consensus 37 ~~~p~~v~~P~~~g~~PvVv~lHG~~-~~~~~y~~l~~~Las~G~~VvapD~~-g~~~---~~~~~-------------~ 98 (313)
T PLN00021 37 PPKPLLVATPSEAGTYPVLLFLHGYL-LYNSFYSQLLQHIASHGFIVVAPQLY-TLAG---PDGTD-------------E 98 (313)
T ss_pred CCceEEEEeCCCCCCCCEEEEECCCC-CCcccHHHHHHHHHhCCCEEEEecCC-CcCC---CCchh-------------h
Confidence 45888888887767778999999654 45578889999999999999999985 3211 11100 0
Q ss_pred cchHHHHHHHHHh-----------cCCCeEEEEEecccHHHHHHhhcCC-------CccEEEEecCCCCCc---------
Q 025842 108 YVDAKSVIAALKS-----------KGVSAIGAAGFCWGGVVAAKLASSH-------DIQAAVVLHPGAITV--------- 160 (247)
Q Consensus 108 ~~d~~~~i~~l~~-----------~~~~~i~l~G~S~Gg~~a~~~a~~~-------~i~~~v~~~~~~~~~--------- 160 (247)
.++..++++|+.+ .+.++++++|||+||.+++.+|... +++++++++|.....
T Consensus 99 i~d~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~g~~~~~~~~p~i 178 (313)
T PLN00021 99 IKDAAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVDGTSKGKQTPPPV 178 (313)
T ss_pred HHHHHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeeccccccccccCCCCcc
Confidence 1334445555543 2347899999999999999988442 689999888854221
Q ss_pred ----cccccccccEEEeecCCCC-----CCC----HHH-HHHHHHHHHhccCCCeeEEEeCCCCccccccCCCC------
Q 025842 161 ----DDINEIKVPVAILGAEIDH-----VSP----PED-LKRFGEILSAKLKNDCLVKIYPRVSHGWTVRYNVE------ 220 (247)
Q Consensus 161 ----~~~~~~~~P~l~i~g~~D~-----~~~----~~~-~~~~~~~l~~~~~~~~~~~~~~~~~H~~~~~~~~~------ 220 (247)
.....+..|+|++.+..|. ++| ... ..++++.++ . ++.+.+.++++|.-..+....
T Consensus 179 l~~~~~s~~~~~P~liig~g~~~~~~~~~~p~~ap~~~~~~~f~~~~~-~---~~~~~~~~~~gH~~~~~~~~~~~~~~~ 254 (313)
T PLN00021 179 LTYAPHSFNLDIPVLVIGTGLGGEPRNPLFPPCAPDGVNHAEFFNECK-A---PAVHFVAKDYGHMDMLDDDTSGIRGKI 254 (313)
T ss_pred cccCcccccCCCCeEEEecCCCcccccccccccCCCCCCHHHHHHhcC-C---CeeeeeecCCCcceeecCCCccccccc
Confidence 0123467999999998763 222 333 367777762 2 677888888999655333200
Q ss_pred -------ChHHHHHHHHHHHHHHHHHHHHhccC
Q 025842 221 -------DEFAVKSAEEAHEDMINWLTKYVKRD 246 (247)
Q Consensus 221 -------~~~~~~~~~~~~~~~~~fl~~~~~~~ 246 (247)
.......++.....++.||+.++.++
T Consensus 255 ~~~~c~~g~~~~~~r~~~~g~~~aFl~~~l~~~ 287 (313)
T PLN00021 255 TGCMCKNGKPRKPMRRFVGGAVVAFLKAYLEGD 287 (313)
T ss_pred cccccCCCCchHHHHHHHHHHHHHHHHHHhcCc
Confidence 11123567788889999999988653
No 62
>PRK10115 protease 2; Provisional
Probab=99.77 E-value=5.5e-17 Score=143.97 Aligned_cols=200 Identities=14% Similarity=0.092 Sum_probs=141.1
Q ss_pred ecC--ceEEEee-cC--CCCCCeEEEEEcCccCCCc-chHHHHHHHHHhcCcEEEEeccCCCCCccCCCCcccchHHHHh
Q 025842 27 LGG--LNTYVTG-SG--PPDSKSAILLISDVFGYEA-PLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRK 100 (247)
Q Consensus 27 ~~~--~~~~~~~-p~--~~~~~~~vv~~hgg~g~~~-~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~ 100 (247)
.+| +++++.. |. ..++.|.||+.|||++.+. ..+......|+++||.|+.+++| |.+. .. ..|..
T Consensus 424 ~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~R-Gs~g--~G------~~w~~ 494 (686)
T PRK10115 424 RDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVR-GGGE--LG------QQWYE 494 (686)
T ss_pred CCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcC-CCCc--cC------HHHHH
Confidence 455 5554444 32 2455789999999988542 23455566889999999999997 3322 11 12222
Q ss_pred h---cCCccccchHHHHHHHHHhc---CCCeEEEEEecccHHHHHHhhc-CC-CccEEEEecCCCC--------------
Q 025842 101 I---HNTDKGYVDAKSVIAALKSK---GVSAIGAAGFCWGGVVAAKLAS-SH-DIQAAVVLHPGAI-------------- 158 (247)
Q Consensus 101 ~---~~~~~~~~d~~~~i~~l~~~---~~~~i~l~G~S~Gg~~a~~~a~-~~-~i~~~v~~~~~~~-------------- 158 (247)
. ..-....+|+.+++++|.+. +.+|++++|.|.||.++..++. .+ .++|+|+..|...
T Consensus 495 ~g~~~~k~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~D~~~~~~~~~~p~~~ 574 (686)
T PRK10115 495 DGKFLKKKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFVDVVTTMLDESIPLTT 574 (686)
T ss_pred hhhhhcCCCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCchhHhhhcccCCCCCCh
Confidence 1 11124568999999999887 4689999999999999998774 44 8888888776651
Q ss_pred ----------------------Ccccccccccc-EEEeecCCCCCCCHHHHHHHHHHHHhccCCCeeEEEe---CCCCcc
Q 025842 159 ----------------------TVDDINEIKVP-VAILGAEIDHVSPPEDLKRFGEILSAKLKNDCLVKIY---PRVSHG 212 (247)
Q Consensus 159 ----------------------~~~~~~~~~~P-~l~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~---~~~~H~ 212 (247)
+...+.+++.| +|+++|.+|+-||+..+.++..+| ++.+++.+++++ +++||+
T Consensus 575 ~~~~e~G~p~~~~~~~~l~~~SP~~~v~~~~~P~lLi~~g~~D~RV~~~~~~k~~a~L-r~~~~~~~~vl~~~~~~~GHg 653 (686)
T PRK10115 575 GEFEEWGNPQDPQYYEYMKSYSPYDNVTAQAYPHLLVTTGLHDSQVQYWEPAKWVAKL-RELKTDDHLLLLCTDMDSGHG 653 (686)
T ss_pred hHHHHhCCCCCHHHHHHHHHcCchhccCccCCCceeEEecCCCCCcCchHHHHHHHHH-HhcCCCCceEEEEecCCCCCC
Confidence 12245566778 667799999999999999999999 667778888888 999998
Q ss_pred ccccCCCCChHHHHHHHHHHHHHHHHHHHHhc
Q 025842 213 WTVRYNVEDEFAVKSAEEAHEDMINWLTKYVK 244 (247)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~ 244 (247)
.... . ...-+.......|+-..+.
T Consensus 654 ~~~~-r-------~~~~~~~A~~~aFl~~~~~ 677 (686)
T PRK10115 654 GKSG-R-------FKSYEGVAMEYAFLIALAQ 677 (686)
T ss_pred CCcC-H-------HHHHHHHHHHHHHHHHHhC
Confidence 4321 1 1344555666777766654
No 63
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.77 E-value=9.8e-18 Score=137.01 Aligned_cols=180 Identities=22% Similarity=0.288 Sum_probs=113.7
Q ss_pred ceEEEeecCCCCCCeEEEEEcCccCCCc-chHHHHHHHHHhcCcEEEEeccC-CCCCccCCCCcccchHHHHhhcCCccc
Q 025842 30 LNTYVTGSGPPDSKSAILLISDVFGYEA-PLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKG 107 (247)
Q Consensus 30 ~~~~~~~p~~~~~~~~vv~~hgg~g~~~-~~~~~~a~~la~~G~~v~~~d~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (247)
+.+|+..|..+++.|.||+ .||..... +.++.+.+.|+.+|+.++++|++ .|.+...+... +.
T Consensus 177 I~g~LhlP~~~~p~P~VIv-~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l~~--------------D~ 241 (411)
T PF06500_consen 177 IPGYLHLPSGEKPYPTVIV-CGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPLTQ--------------DS 241 (411)
T ss_dssp EEEEEEESSSSS-EEEEEE-E--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S-S---------------C
T ss_pred EEEEEEcCCCCCCCCEEEE-eCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccccCCCCc--------------CH
Confidence 8899998876555554554 54665444 44455557789999999999997 44432011111 11
Q ss_pred cchHHHHHHHHHhc---CCCeEEEEEecccHHHHHHhhc--CCCccEEEEecCCCC------------------------
Q 025842 108 YVDAKSVIAALKSK---GVSAIGAAGFCWGGVVAAKLAS--SHDIQAAVVLHPGAI------------------------ 158 (247)
Q Consensus 108 ~~d~~~~i~~l~~~---~~~~i~l~G~S~Gg~~a~~~a~--~~~i~~~v~~~~~~~------------------------ 158 (247)
..-..+++++|... |..||+++|.|+||+++..+|. .++|+++|..+|...
T Consensus 242 ~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh~~ft~~~~~~~~P~my~d~LA~rl 321 (411)
T PF06500_consen 242 SRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPVHHFFTDPEWQQRVPDMYLDVLASRL 321 (411)
T ss_dssp CHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---SCGGH-HHHHTTS-HHHHHHHHHHC
T ss_pred HHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCchHhhhhccHHHHhcCCHHHHHHHHHHh
Confidence 12345778888876 5679999999999999999883 459999999998751
Q ss_pred --------------------Ccccc--ccccccEEEeecCCCCCCCHHHHHHHHHHHHhccCCCeeEEEeCCCC-ccccc
Q 025842 159 --------------------TVDDI--NEIKVPVAILGAEIDHVSPPEDLKRFGEILSAKLKNDCLVKIYPRVS-HGWTV 215 (247)
Q Consensus 159 --------------------~~~~~--~~~~~P~l~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-H~~~~ 215 (247)
....+ ++..+|+|.+.+++|+++|.+..+.+...- . +.+...++... |.
T Consensus 322 G~~~~~~~~l~~el~~~SLk~qGlL~~rr~~~plL~i~~~~D~v~P~eD~~lia~~s-~----~gk~~~~~~~~~~~--- 393 (411)
T PF06500_consen 322 GMAAVSDESLRGELNKFSLKTQGLLSGRRCPTPLLAINGEDDPVSPIEDSRLIAESS-T----DGKALRIPSKPLHM--- 393 (411)
T ss_dssp T-SCE-HHHHHHHGGGGSTTTTTTTTSS-BSS-EEEEEETT-SSS-HHHHHHHHHTB-T----T-EEEEE-SSSHHH---
T ss_pred CCccCCHHHHHHHHHhcCcchhccccCCCCCcceEEeecCCCCCCCHHHHHHHHhcC-C----CCceeecCCCcccc---
Confidence 11123 567789999999999999999987776643 1 44556666333 43
Q ss_pred cCCCCChHHHHHHHHHHHHHHHHHHHHh
Q 025842 216 RYNVEDEFAVKSAEEAHEDMINWLTKYV 243 (247)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~fl~~~~ 243 (247)
...++...+.+||++.|
T Consensus 394 -----------gy~~al~~~~~Wl~~~l 410 (411)
T PF06500_consen 394 -----------GYPQALDEIYKWLEDKL 410 (411)
T ss_dssp -----------HHHHHHHHHHHHHHHHH
T ss_pred -----------chHHHHHHHHHHHHHhc
Confidence 45789999999999875
No 64
>COG0400 Predicted esterase [General function prediction only]
Probab=99.75 E-value=4e-17 Score=123.19 Aligned_cols=178 Identities=16% Similarity=0.129 Sum_probs=119.9
Q ss_pred CCeEEEEEcCccCCCcchHHHHHHHHHhcCcEEEEeccCCCCCccCCCCcccchHHHHhhc--CCccccchHHHHHHHHH
Q 025842 42 SKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIH--NTDKGYVDAKSVIAALK 119 (247)
Q Consensus 42 ~~~~vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~d~~~~i~~l~ 119 (247)
..|.||++| |.|.+...+..+...+... +.++.+.-+ . .......+..|.... +.+....+.....+++.
T Consensus 17 ~~~~iilLH-G~Ggde~~~~~~~~~~~P~-~~~is~rG~---v---~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~ 88 (207)
T COG0400 17 AAPLLILLH-GLGGDELDLVPLPELILPN-ATLVSPRGP---V---AENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLE 88 (207)
T ss_pred CCcEEEEEe-cCCCChhhhhhhhhhcCCC-CeEEcCCCC---c---cccCcccceeecCCCccchhhHHHHHHHHHHHHH
Confidence 345688888 6665555555655555443 666666543 1 111111111222111 11222223333333333
Q ss_pred ---hc---CCCeEEEEEecccHHHHHHhhcCC--CccEEEEecCCCCCccc-c-ccccccEEEeecCCCCCCCHHHHHHH
Q 025842 120 ---SK---GVSAIGAAGFCWGGVVAAKLASSH--DIQAAVVLHPGAITVDD-I-NEIKVPVAILGAEIDHVSPPEDLKRF 189 (247)
Q Consensus 120 ---~~---~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~~~~~~~~~-~-~~~~~P~l~i~g~~D~~~~~~~~~~~ 189 (247)
+. +.++++++|+|+||.+++.+.... .++++++++|....... . .....|++++||..|++||...+.++
T Consensus 89 ~~~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~~~~~~~~~~pill~hG~~Dpvvp~~~~~~l 168 (207)
T COG0400 89 ELAEEYGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEPELLPDLAGTPILLSHGTEDPVVPLALAEAL 168 (207)
T ss_pred HHHHHhCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCCccccccCCCeEEEeccCcCCccCHHHHHHH
Confidence 32 458999999999999999988555 79999999998865532 2 23458999999999999999999999
Q ss_pred HHHHHhccCCCeeEEEeCCCCccccccCCCCChHHHHHHHHHHHHHHHHHHHHh
Q 025842 190 GEILSAKLKNDCLVKIYPRVSHGWTVRYNVEDEFAVKSAEEAHEDMINWLTKYV 243 (247)
Q Consensus 190 ~~~l~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~ 243 (247)
.+.+ ++.|.+++..+++ .||... .+..+.+.+|+.+.+
T Consensus 169 ~~~l-~~~g~~v~~~~~~-~GH~i~--------------~e~~~~~~~wl~~~~ 206 (207)
T COG0400 169 AEYL-TASGADVEVRWHE-GGHEIP--------------PEELEAARSWLANTL 206 (207)
T ss_pred HHHH-HHcCCCEEEEEec-CCCcCC--------------HHHHHHHHHHHHhcc
Confidence 9999 6688999999999 699863 467788888998754
No 65
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.75 E-value=6.3e-17 Score=127.10 Aligned_cols=197 Identities=20% Similarity=0.300 Sum_probs=135.3
Q ss_pred ceEEEeecCCCCCCeEEEEEcCccCCC-cchHHHHHHHHHhcCcEEEEeccCCCCCccCCCCcccchHHHHhhcCCcccc
Q 025842 30 LNTYVTGSGPPDSKSAILLISDVFGYE-APLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGY 108 (247)
Q Consensus 30 ~~~~~~~p~~~~~~~~vv~~hgg~g~~-~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (247)
+...+..++.....|.||++||.-|+. +...+.+++.+.++||.|++++.| |-+. .+... .........
T Consensus 62 ~~ldw~~~p~~~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~R-gcs~-~~n~~--------p~~yh~G~t 131 (345)
T COG0429 62 IDLDWSEDPRAAKKPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFR-GCSG-EANTS--------PRLYHSGET 131 (345)
T ss_pred EEEeeccCccccCCceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecc-cccC-CcccC--------cceecccch
Confidence 445555433444568999999776643 345578999999999999999997 3322 12211 111223344
Q ss_pred chHHHHHHHHHhc-CCCeEEEEEecccH-HHHHHhhcCC---CccEEEEecCCC--------------------------
Q 025842 109 VDAKSVIAALKSK-GVSAIGAAGFCWGG-VVAAKLASSH---DIQAAVVLHPGA-------------------------- 157 (247)
Q Consensus 109 ~d~~~~i~~l~~~-~~~~i~l~G~S~Gg-~~a~~~a~~~---~i~~~v~~~~~~-------------------------- 157 (247)
+|+..+++++++. ...++.++|+|+|| +++..++... .+.+.+.++...
T Consensus 132 ~D~~~~l~~l~~~~~~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl~~~~~~l~~~~s~~ly~r~l~~~L 211 (345)
T COG0429 132 EDIRFFLDWLKARFPPRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDLEACAYRLDSGFSLRLYSRYLLRNL 211 (345)
T ss_pred hHHHHHHHHHHHhCCCCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHHHHHHHHHHhcCchhhhhhHHHHHHHH
Confidence 8999999999986 56799999999999 5566666433 566665554332
Q ss_pred -----------------------------------------------------CCccccccccccEEEeecCCCCCCCHH
Q 025842 158 -----------------------------------------------------ITVDDINEIKVPVAILGAEIDHVSPPE 184 (247)
Q Consensus 158 -----------------------------------------------------~~~~~~~~~~~P~l~i~g~~D~~~~~~ 184 (247)
.....+.+|.+|+||||+.+|++++.+
T Consensus 212 ~~~~~~kl~~l~~~~p~~~~~~ik~~~ti~eFD~~~Tap~~Gf~da~dYYr~aSs~~~L~~Ir~PtLii~A~DDP~~~~~ 291 (345)
T COG0429 212 KRNAARKLKELEPSLPGTVLAAIKRCRTIREFDDLLTAPLHGFADAEDYYRQASSLPLLPKIRKPTLIINAKDDPFMPPE 291 (345)
T ss_pred HHHHHHHHHhcCcccCcHHHHHHHhhchHHhccceeeecccCCCcHHHHHHhccccccccccccceEEEecCCCCCCChh
Confidence 113357889999999999999999988
Q ss_pred HHHHHHHHHHhccCCCeeEEEeCCCCccccccCCCCChHHHHHHHHHHHHHHHHHHHHhcc
Q 025842 185 DLKRFGEILSAKLKNDCLVKIYPRVSHGWTVRYNVEDEFAVKSAEEAHEDMINWLTKYVKR 245 (247)
Q Consensus 185 ~~~~~~~~l~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~ 245 (247)
...+..... +..+.+.+-+.+||.-...+... +....+.+++++||+..+..
T Consensus 292 ~iP~~~~~~----np~v~l~~t~~GGHvGfl~~~~~-----~~~~W~~~ri~~~l~~~~~~ 343 (345)
T COG0429 292 VIPKLQEML----NPNVLLQLTEHGGHVGFLGGKLL-----HPQMWLEQRILDWLDPFLEA 343 (345)
T ss_pred hCCcchhcC----CCceEEEeecCCceEEeccCccc-----cchhhHHHHHHHHHHHHHhh
Confidence 877766643 22788888888899543332221 12247889999999987643
No 66
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.75 E-value=3.4e-17 Score=133.05 Aligned_cols=175 Identities=22% Similarity=0.273 Sum_probs=127.9
Q ss_pred CCCeEEEEEcCccCCCcchHHHHHHHHHhc-CcEEEEeccC-CCCCccCCCCcccchHHHHhhcCCccccchHHHHHHHH
Q 025842 41 DSKSAILLISDVFGYEAPLFRKLADKVAGA-GFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAAL 118 (247)
Q Consensus 41 ~~~~~vv~~hgg~g~~~~~~~~~a~~la~~-G~~v~~~d~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l 118 (247)
..+++||++| |++.+...|+.....|... |+.|+++|.+ +|.+.-.+........ ..+....+..
T Consensus 56 ~~~~pvlllH-GF~~~~~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~~~~~y~~~------------~~v~~i~~~~ 122 (326)
T KOG1454|consen 56 KDKPPVLLLH-GFGASSFSWRRVVPLLSKAKGLRVLAIDLPGHGYSSPLPRGPLYTLR------------ELVELIRRFV 122 (326)
T ss_pred CCCCcEEEec-cccCCcccHhhhccccccccceEEEEEecCCCCcCCCCCCCCceehh------------HHHHHHHHHH
Confidence 4689999999 5555778899999888766 6999999998 6632202222222222 2233444455
Q ss_pred HhcCCCeEEEEEecccHHHHHHhhcCC--CccEEE---EecCCCC-----------------------------------
Q 025842 119 KSKGVSAIGAAGFCWGGVVAAKLASSH--DIQAAV---VLHPGAI----------------------------------- 158 (247)
Q Consensus 119 ~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v---~~~~~~~----------------------------------- 158 (247)
.+....++.++|||+||.+|+.+|... .++.++ ++.+...
T Consensus 123 ~~~~~~~~~lvghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 202 (326)
T KOG1454|consen 123 KEVFVEPVSLVGHSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPKGIKGLRRLLDKFLSALELLIPLSLTEPVRLV 202 (326)
T ss_pred HhhcCcceEEEEeCcHHHHHHHHHHhCcccccceeeecccccccccCCcchhHHHHhhhhhccHhhhcCccccccchhhe
Confidence 555667899999999999999988655 888888 4443330
Q ss_pred ----------------------------------------------C------cccccccc-ccEEEeecCCCCCCCHHH
Q 025842 159 ----------------------------------------------T------VDDINEIK-VPVAILGAEIDHVSPPED 185 (247)
Q Consensus 159 ----------------------------------------------~------~~~~~~~~-~P~l~i~g~~D~~~~~~~ 185 (247)
. ...++++. +|+|+++|++|+++|.+.
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pvlii~G~~D~~~p~~~ 282 (326)
T KOG1454|consen 203 SEGLLRCLKVVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLGFDENLLSLIKKIWKCPVLIIWGDKDQIVPLEL 282 (326)
T ss_pred eHhhhcceeeeccccccchhhhhhheecccccchhhhheeeEEEeccCccchHHHhhccccCCceEEEEcCcCCccCHHH
Confidence 0 01234555 999999999999999998
Q ss_pred HHHHHHHHHhccCCCeeEEEeCCCCccccccCCCCChHHHHHHHHHHHHHHHHHHHHh
Q 025842 186 LKRFGEILSAKLKNDCLVKIYPRVSHGWTVRYNVEDEFAVKSAEEAHEDMINWLTKYV 243 (247)
Q Consensus 186 ~~~~~~~l~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~ 243 (247)
+..+.+.++ ++++++++++||..... .+++..+.+..|+..+.
T Consensus 283 ~~~~~~~~p-----n~~~~~I~~~gH~~h~e----------~Pe~~~~~i~~Fi~~~~ 325 (326)
T KOG1454|consen 283 AEELKKKLP-----NAELVEIPGAGHLPHLE----------RPEEVAALLRSFIARLR 325 (326)
T ss_pred HHHHHhhCC-----CceEEEeCCCCcccccC----------CHHHHHHHHHHHHHHhc
Confidence 888888773 78999999999987662 57899999999998753
No 67
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.75 E-value=1.5e-16 Score=129.24 Aligned_cols=185 Identities=16% Similarity=0.159 Sum_probs=120.6
Q ss_pred EEeecCceEEEeecCCCCCCeEEEEEcCccCCCcchHHHHHHHHHhcCcEEEEeccC-CCCCccCCCC-cccchHHHHhh
Q 025842 24 VQQLGGLNTYVTGSGPPDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNN-PQFDREAWRKI 101 (247)
Q Consensus 24 ~~~~~~~~~~~~~p~~~~~~~~vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~~-~g~~~~~~~~-~~~~~~~~~~~ 101 (247)
+...++...++....+ ...++||++||+.+... . ..+...+..++|.|+++|++ +|.+. .+.. ....
T Consensus 9 ~~~~~~~~l~y~~~g~-~~~~~lvllHG~~~~~~-~-~~~~~~~~~~~~~vi~~D~~G~G~S~-~~~~~~~~~------- 77 (306)
T TIGR01249 9 LNVSDNHQLYYEQSGN-PDGKPVVFLHGGPGSGT-D-PGCRRFFDPETYRIVLFDQRGCGKST-PHACLEENT------- 77 (306)
T ss_pred EEcCCCcEEEEEECcC-CCCCEEEEECCCCCCCC-C-HHHHhccCccCCEEEEECCCCCCCCC-CCCCcccCC-------
Confidence 3344566677664322 22467999998665432 2 23445555678999999998 77765 2211 1111
Q ss_pred cCCccccchHHHHHHHHHhcCCCeEEEEEecccHHHHHHhhcCC--CccEEEEecCCC----------------------
Q 025842 102 HNTDKGYVDAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLASSH--DIQAAVVLHPGA---------------------- 157 (247)
Q Consensus 102 ~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~~~~---------------------- 157 (247)
.+...+|+..+++.+ +.+++.++||||||.+++.++... .++++|+.++..
T Consensus 78 --~~~~~~dl~~l~~~l---~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (306)
T TIGR01249 78 --TWDLVADIEKLREKL---GIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFLLREKEWSWFYEGGASMIYPDAW 152 (306)
T ss_pred --HHHHHHHHHHHHHHc---CCCCEEEEEECHHHHHHHHHHHHChHhhhhheeeccccCCHHHHHHHHhcchhhhCHHHH
Confidence 112234555444443 567899999999999999987544 677666654210
Q ss_pred ---------C-C-------------------------------c------------------------------------
Q 025842 158 ---------I-T-------------------------------V------------------------------------ 160 (247)
Q Consensus 158 ---------~-~-------------------------------~------------------------------------ 160 (247)
. . .
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (306)
T TIGR01249 153 QRFMDSIPENERNEQLVNAYHDRLQSGDEETKLAAAKAWVDWESTTLLRPINEIVSTAEDFKFSLAFARLENHYFVNKGF 232 (306)
T ss_pred HHHhhhCChhhhhccHHHHHHHHccCCCHHHHHHHHHHHHHHhChhhcCCCCCccccccchHHHHHHHHHHHhHHHHhch
Confidence 0 0 0
Q ss_pred --------cccccc-cccEEEeecCCCCCCCHHHHHHHHHHHHhccCCCeeEEEeCCCCccccccCCCCChHHHHHHHHH
Q 025842 161 --------DDINEI-KVPVAILGAEIDHVSPPEDLKRFGEILSAKLKNDCLVKIYPRVSHGWTVRYNVEDEFAVKSAEEA 231 (247)
Q Consensus 161 --------~~~~~~-~~P~l~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~ 231 (247)
..+.++ ++|+|+++|.+|.++|.+.++.+.+.++ +.++++++++||.... ++.
T Consensus 233 ~~~~~~~~~~~~~i~~~P~lii~g~~D~~~p~~~~~~~~~~~~-----~~~~~~~~~~gH~~~~-------------~~~ 294 (306)
T TIGR01249 233 LDVENFILDNISKIRNIPTYIVHGRYDLCCPLQSAWALHKAFP-----EAELKVTNNAGHSAFD-------------PNN 294 (306)
T ss_pred hcCchHHHHhhhhccCCCeEEEecCCCCCCCHHHHHHHHHhCC-----CCEEEEECCCCCCCCC-------------hHH
Confidence 001233 4899999999999999999999998874 6789999999998643 356
Q ss_pred HHHHHHHHHHH
Q 025842 232 HEDMINWLTKY 242 (247)
Q Consensus 232 ~~~~~~fl~~~ 242 (247)
.+.+.+|+...
T Consensus 295 ~~~i~~~~~~~ 305 (306)
T TIGR01249 295 LAALVHALETY 305 (306)
T ss_pred HHHHHHHHHHh
Confidence 67777777654
No 68
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.75 E-value=1.9e-17 Score=121.97 Aligned_cols=184 Identities=20% Similarity=0.259 Sum_probs=138.1
Q ss_pred ceEEEeecCCCCCCeEEEEEcCccCCCcchHHHHHH-HHHhcCcEEEEeccC-CCCCccCCCCcccchHHHHhhcCCccc
Q 025842 30 LNTYVTGSGPPDSKSAILLISDVFGYEAPLFRKLAD-KVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKG 107 (247)
Q Consensus 30 ~~~~~~~p~~~~~~~~vv~~hgg~g~~~~~~~~~a~-~la~~G~~v~~~d~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (247)
+.+|+. ..+...|.++++|+-.|.- .....+++ .+...+..|+.++|| .|.|.+.|...+ .
T Consensus 67 L~a~~~--~~E~S~pTlLyfh~NAGNm-Ghr~~i~~~fy~~l~mnv~ivsYRGYG~S~GspsE~G--------------L 129 (300)
T KOG4391|consen 67 LDAYLM--LSESSRPTLLYFHANAGNM-GHRLPIARVFYVNLKMNVLIVSYRGYGKSEGSPSEEG--------------L 129 (300)
T ss_pred Eeeeee--cccCCCceEEEEccCCCcc-cchhhHHHHHHHHcCceEEEEEeeccccCCCCccccc--------------e
Confidence 566776 4566789999999666643 33345555 445679999999998 787764444322 2
Q ss_pred cchHHHHHHHHHhc---CCCeEEEEEecccHHHHHHhhcCC--CccEEEEecCCC-------------------------
Q 025842 108 YVDAKSVIAALKSK---GVSAIGAAGFCWGGVVAAKLASSH--DIQAAVVLHPGA------------------------- 157 (247)
Q Consensus 108 ~~d~~~~i~~l~~~---~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~~~~------------------------- 157 (247)
.-|.+++++++-+. +..+|++.|.|.||..++.+|.+. ++.++++-+...
T Consensus 130 ~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ivENTF~SIp~~~i~~v~p~~~k~i~~lc~kn 209 (300)
T KOG4391|consen 130 KLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVENTFLSIPHMAIPLVFPFPMKYIPLLCYKN 209 (300)
T ss_pred eccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhheeeeeeechhccchhhhhheeccchhhHHHHHHHHh
Confidence 37899999999987 567999999999999999988655 888887644322
Q ss_pred --CCccccccccccEEEeecCCCCCCCHHHHHHHHHHHHhccCCCeeEEEeCCCCccccccCCCCChHHHHHHHHHHHHH
Q 025842 158 --ITVDDINEIKVPVAILGAEIDHVSPPEDLKRFGEILSAKLKNDCLVKIYPRVSHGWTVRYNVEDEFAVKSAEEAHEDM 235 (247)
Q Consensus 158 --~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~ 235 (247)
........-+.|.|++.|.+|.+||+...+++++..+.. ..++.+||++.|.-.- ..+-.++.+
T Consensus 210 ~~~S~~ki~~~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~---~Krl~eFP~gtHNDT~-----------i~dGYfq~i 275 (300)
T KOG4391|consen 210 KWLSYRKIGQCRMPFLFISGLKDELVPPVMMRQLYELCPSR---TKRLAEFPDGTHNDTW-----------ICDGYFQAI 275 (300)
T ss_pred hhcchhhhccccCceEEeecCccccCCcHHHHHHHHhCchh---hhhheeCCCCccCceE-----------EeccHHHHH
Confidence 112234445689999999999999999999999988544 6789999999997332 245688899
Q ss_pred HHHHHHHhc
Q 025842 236 INWLTKYVK 244 (247)
Q Consensus 236 ~~fl~~~~~ 244 (247)
.+||.+...
T Consensus 276 ~dFlaE~~~ 284 (300)
T KOG4391|consen 276 EDFLAEVVK 284 (300)
T ss_pred HHHHHHhcc
Confidence 999987654
No 69
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.75 E-value=9e-18 Score=127.69 Aligned_cols=193 Identities=21% Similarity=0.217 Sum_probs=136.6
Q ss_pred ceEEEeecCCC-CCCeEEEEEcCccCCCcchHHHHHHHHHhcCcEEEEeccC-CCCCccC-CCCccc-chHHHHhhcC--
Q 025842 30 LNTYVTGSGPP-DSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVD-LNNPQF-DREAWRKIHN-- 103 (247)
Q Consensus 30 ~~~~~~~p~~~-~~~~~vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~~-~g~~~~~-~~~~~~-~~~~~~~~~~-- 103 (247)
|.+|+.+|..+ ++.|.||-+| |+++....+.++. .++..||.|+.+|.| .|.++.+ +..... +...|+.+..
T Consensus 69 I~gwlvlP~~~~~~~P~vV~fh-GY~g~~g~~~~~l-~wa~~Gyavf~MdvRGQg~~~~dt~~~p~~~s~pG~mtrGilD 146 (321)
T COG3458 69 IKGWLVLPRHEKGKLPAVVQFH-GYGGRGGEWHDML-HWAVAGYAVFVMDVRGQGSSSQDTADPPGGPSDPGFMTRGILD 146 (321)
T ss_pred EEEEEEeecccCCccceEEEEe-eccCCCCCccccc-cccccceeEEEEecccCCCccccCCCCCCCCcCCceeEeeccc
Confidence 88999998776 6778899999 4443333333333 466889999999997 4444311 111122 3334433222
Q ss_pred ------CccccchHHHHHHHHHhc---CCCeEEEEEecccHHHHHHhh-cCCCccEEEEecCCCCC--------------
Q 025842 104 ------TDKGYVDAKSVIAALKSK---GVSAIGAAGFCWGGVVAAKLA-SSHDIQAAVVLHPGAIT-------------- 159 (247)
Q Consensus 104 ------~~~~~~d~~~~i~~l~~~---~~~~i~l~G~S~Gg~~a~~~a-~~~~i~~~v~~~~~~~~-------------- 159 (247)
+.....|+..+++.+... +.+||++.|.|+||.+++.++ .+++|+++++..|.+..
T Consensus 147 ~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~rik~~~~~~Pfl~df~r~i~~~~~~~yd 226 (321)
T COG3458 147 RKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDPRIKAVVADYPFLSDFPRAIELATEGPYD 226 (321)
T ss_pred CCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcChhhhcccccccccccchhheeecccCcHH
Confidence 244556787888877766 678999999999999999976 56699999999888711
Q ss_pred -------------------------ccccccccccEEEeecCCCCCCCHHHHHHHHHHHHhccCCCeeEEEeCCCCcccc
Q 025842 160 -------------------------VDDINEIKVPVAILGAEIDHVSPPEDLKRFGEILSAKLKNDCLVKIYPRVSHGWT 214 (247)
Q Consensus 160 -------------------------~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~H~~~ 214 (247)
.....+++.|+|+..|..|++||+...-..++.+.. .+++.+|+--+|.-.
T Consensus 227 ei~~y~k~h~~~e~~v~~TL~yfD~~n~A~RiK~pvL~svgL~D~vcpPstqFA~yN~l~~----~K~i~iy~~~aHe~~ 302 (321)
T COG3458 227 EIQTYFKRHDPKEAEVFETLSYFDIVNLAARIKVPVLMSVGLMDPVCPPSTQFAAYNALTT----SKTIEIYPYFAHEGG 302 (321)
T ss_pred HHHHHHHhcCchHHHHHHHHhhhhhhhHHHhhccceEEeecccCCCCCChhhHHHhhcccC----CceEEEeeccccccC
Confidence 123467899999999999999999999999999943 567888887778632
Q ss_pred ccCCCCChHHHHHHHHHHHHHHHHHHH
Q 025842 215 VRYNVEDEFAVKSAEEAHEDMINWLTK 241 (247)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~fl~~ 241 (247)
. .-..+++..|++.
T Consensus 303 p-------------~~~~~~~~~~l~~ 316 (321)
T COG3458 303 P-------------GFQSRQQVHFLKI 316 (321)
T ss_pred c-------------chhHHHHHHHHHh
Confidence 2 2344556777764
No 70
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.75 E-value=3.6e-17 Score=125.92 Aligned_cols=154 Identities=14% Similarity=0.156 Sum_probs=101.7
Q ss_pred EEeecCC-CCCCeEEEEEcCccCCCcchHH---HHHHHHHhcCcEEEEeccC-CCCCccCCCCcccchHHHHhh---cCC
Q 025842 33 YVTGSGP-PDSKSAILLISDVFGYEAPLFR---KLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKI---HNT 104 (247)
Q Consensus 33 ~~~~p~~-~~~~~~vv~~hgg~g~~~~~~~---~~a~~la~~G~~v~~~d~~-~g~~~~~~~~~~~~~~~~~~~---~~~ 104 (247)
|++.|.. .++.|.||++||+.+ +...+. .+...+.+.||.|++||++ ++... . ...|... ...
T Consensus 2 ~ly~P~~~~~~~P~vv~lHG~~~-~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~--~------~~~~~~~~~~~~~ 72 (212)
T TIGR01840 2 YVYVPAGLTGPRALVLALHGCGQ-TASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSN--N------CWDWFFTHHRARG 72 (212)
T ss_pred EEEcCCCCCCCCCEEEEeCCCCC-CHHHHhhhcChHHHHHhCCeEEEecCCcCccccC--C------CCCCCCccccCCC
Confidence 5565654 346788999996544 333333 2455555679999999996 33211 0 0011111 011
Q ss_pred ccccchHHHHHHHHHhc---CCCeEEEEEecccHHHHHHhhcCC--CccEEEEecCCCCCcc------------------
Q 025842 105 DKGYVDAKSVIAALKSK---GVSAIGAAGFCWGGVVAAKLASSH--DIQAAVVLHPGAITVD------------------ 161 (247)
Q Consensus 105 ~~~~~d~~~~i~~l~~~---~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~~~~~~~~------------------ 161 (247)
.....++..+++++.+. +.++|+++|||+||.+++.++..+ .+.+++++++......
T Consensus 73 ~~~~~~~~~~i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 152 (212)
T TIGR01840 73 TGEVESLHQLIDAVKANYSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLPYGEASSSISATPQMCTAATAAS 152 (212)
T ss_pred CccHHHHHHHHHHHHHhcCcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCcccccccchhhHhhcCCCCCHHH
Confidence 22346677888888765 457999999999999999988544 6888888887642100
Q ss_pred ----------ccccccccEEEeecCCCCCCCHHHHHHHHHHHHh
Q 025842 162 ----------DINEIKVPVAILGAEIDHVSPPEDLKRFGEILSA 195 (247)
Q Consensus 162 ----------~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~l~~ 195 (247)
......+|++++||.+|.+||.+.++++.+.+.+
T Consensus 153 ~~~~~~~~~~~~~~~~p~~~i~hG~~D~vVp~~~~~~~~~~l~~ 196 (212)
T TIGR01840 153 VCRLVRGMQSEYNGPTPIMSVVHGDADYTVLPGNADEIRDAMLK 196 (212)
T ss_pred HHHHHhccCCcccCCCCeEEEEEcCCCceeCcchHHHHHHHHHH
Confidence 1112345678999999999999999999999843
No 71
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=99.74 E-value=7.3e-16 Score=125.59 Aligned_cols=185 Identities=23% Similarity=0.220 Sum_probs=133.6
Q ss_pred ceEEEeec--CCCCCCeEEEEEcCccC--CCcchH-HHHHHHHHhcCcEEEEeccCCCCCccCCCCcccchHHHHhhcCC
Q 025842 30 LNTYVTGS--GPPDSKSAILLISDVFG--YEAPLF-RKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNT 104 (247)
Q Consensus 30 ~~~~~~~p--~~~~~~~~vv~~hgg~g--~~~~~~-~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~ 104 (247)
+...++.| ....+.|.||++|||.= ...... ..++..++..|+.|+++||| -.+. ..+
T Consensus 64 ~~~~~y~p~~~~~~~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYr-laPe----------------~~~ 126 (312)
T COG0657 64 VPVRVYRPDRKAAATAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYR-LAPE----------------HPF 126 (312)
T ss_pred eeEEEECCCCCCCCCCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCC-CCCC----------------CCC
Confidence 66777766 33445788999996531 222233 44555666789999999996 1111 122
Q ss_pred ccccchHHHHHHHHHhc------CCCeEEEEEecccHHHHHHhhcC------CCccEEEEecCCCCC-------------
Q 025842 105 DKGYVDAKSVIAALKSK------GVSAIGAAGFCWGGVVAAKLASS------HDIQAAVVLHPGAIT------------- 159 (247)
Q Consensus 105 ~~~~~d~~~~i~~l~~~------~~~~i~l~G~S~Gg~~a~~~a~~------~~i~~~v~~~~~~~~------------- 159 (247)
....+|+.+++.++.++ +.++|+++|+|.||.+++.++.. +...+.++++|....
T Consensus 127 p~~~~d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~~~~~~~~~~~~~ 206 (312)
T COG0657 127 PAALEDAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLTSSAASLPGYGEA 206 (312)
T ss_pred CchHHHHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCcccccchhhcCCc
Confidence 33458889999999976 47899999999999999997721 267888888887511
Q ss_pred --------------------------------ccccccccccEEEeecCCCCCCCHHHHHHHHHHHHhccCCCeeEEEeC
Q 025842 160 --------------------------------VDDINEIKVPVAILGAEIDHVSPPEDLKRFGEILSAKLKNDCLVKIYP 207 (247)
Q Consensus 160 --------------------------------~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 207 (247)
...+.. -+|+++++|+.|.+.+ ....+.+++ ++.|+.+++..++
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~spl~~~~~~~-lPP~~i~~a~~D~l~~--~~~~~a~~L-~~agv~~~~~~~~ 282 (312)
T COG0657 207 DLLDAAAILAWFADLYLGAAPDREDPEASPLASDDLSG-LPPTLIQTAEFDPLRD--EGEAYAERL-RAAGVPVELRVYP 282 (312)
T ss_pred cccCHHHHHHHHHHHhCcCccccCCCccCccccccccC-CCCEEEEecCCCcchh--HHHHHHHHH-HHcCCeEEEEEeC
Confidence 001223 4789999999999887 778899999 7789999999999
Q ss_pred CCCccccccCCCCChHHHHHHHHHHHHHHHHHHHH
Q 025842 208 RVSHGWTVRYNVEDEFAVKSAEEAHEDMINWLTKY 242 (247)
Q Consensus 208 ~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~ 242 (247)
+..|+|...... ...+.+.++.+|+...
T Consensus 283 g~~H~f~~~~~~-------~a~~~~~~~~~~l~~~ 310 (312)
T COG0657 283 GMIHGFDLLTGP-------EARSALRQIAAFLRAA 310 (312)
T ss_pred CcceeccccCcH-------HHHHHHHHHHHHHHHh
Confidence 999998654432 4556688888888743
No 72
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.73 E-value=2.6e-16 Score=131.41 Aligned_cols=69 Identities=13% Similarity=0.094 Sum_probs=55.4
Q ss_pred ccccccEEEeecCCCCCCCHHHHHHHHHHHHhccCCCeeEEEeC-CCCccccccCCCCChHHHHHHHHHHHHHHHHHHHH
Q 025842 164 NEIKVPVAILGAEIDHVSPPEDLKRFGEILSAKLKNDCLVKIYP-RVSHGWTVRYNVEDEFAVKSAEEAHEDMINWLTKY 242 (247)
Q Consensus 164 ~~~~~P~l~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~ 242 (247)
.++++|+|+|+|++|.++|++..+.+.+.++ ..+..+++++++ ++||..... ..+++.+.+.+||++.
T Consensus 306 ~~I~~PtLvI~G~~D~~~p~~~~~~la~~i~-~a~~~~~l~~i~~~~GH~~~le----------~p~~~~~~L~~FL~~~ 374 (379)
T PRK00175 306 ARIKARFLVVSFTSDWLFPPARSREIVDALL-AAGADVSYAEIDSPYGHDAFLL----------DDPRYGRLVRAFLERA 374 (379)
T ss_pred hcCCCCEEEEEECCccccCHHHHHHHHHHHH-hcCCCeEEEEeCCCCCchhHhc----------CHHHHHHHHHHHHHhh
Confidence 3568899999999999999999999999994 333345777775 899987663 4678899999999875
Q ss_pred h
Q 025842 243 V 243 (247)
Q Consensus 243 ~ 243 (247)
-
T Consensus 375 ~ 375 (379)
T PRK00175 375 A 375 (379)
T ss_pred h
Confidence 4
No 73
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.72 E-value=4.9e-16 Score=112.62 Aligned_cols=171 Identities=18% Similarity=0.232 Sum_probs=123.5
Q ss_pred CCCCeEEEEEcC----ccCCCcchHHHHHHHHHhcCcEEEEeccC-CCCCccCCCCcccchHHHHhhcCCccccchHHHH
Q 025842 40 PDSKSAILLISD----VFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSV 114 (247)
Q Consensus 40 ~~~~~~vv~~hg----g~g~~~~~~~~~a~~la~~G~~v~~~d~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 114 (247)
....|..|++|. |..++..-...++..|.++||.++.+|+| -|.|.+..++. +. ..+|+.++
T Consensus 25 ~~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~fD~G---iG----------E~~Da~aa 91 (210)
T COG2945 25 TPAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEFDNG---IG----------ELEDAAAA 91 (210)
T ss_pred CCCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCcccCC---cc----------hHHHHHHH
Confidence 345666777772 22233344567888999999999999998 55554122211 11 13899999
Q ss_pred HHHHHhcCC-Ce-EEEEEecccHHHHHHhhc-CCCccEEEEecCCCCC--ccccccccccEEEeecCCCCCCCHHHHHHH
Q 025842 115 IAALKSKGV-SA-IGAAGFCWGGVVAAKLAS-SHDIQAAVVLHPGAIT--VDDINEIKVPVAILGAEIDHVSPPEDLKRF 189 (247)
Q Consensus 115 i~~l~~~~~-~~-i~l~G~S~Gg~~a~~~a~-~~~i~~~v~~~~~~~~--~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~ 189 (247)
++|++++.+ .+ ..+.|+|+|+++++.+|. .+.+...++..|.... ...+.....|.++++|+.|++++.....++
T Consensus 92 ldW~~~~hp~s~~~~l~GfSFGa~Ia~~la~r~~e~~~~is~~p~~~~~dfs~l~P~P~~~lvi~g~~Ddvv~l~~~l~~ 171 (210)
T COG2945 92 LDWLQARHPDSASCWLAGFSFGAYIAMQLAMRRPEILVFISILPPINAYDFSFLAPCPSPGLVIQGDADDVVDLVAVLKW 171 (210)
T ss_pred HHHHHhhCCCchhhhhcccchHHHHHHHHHHhcccccceeeccCCCCchhhhhccCCCCCceeEecChhhhhcHHHHHHh
Confidence 999999832 33 368999999999999884 4577777777776642 123444567999999999999988777776
Q ss_pred HHHHHhccCCCeeEEEeCCCCccccccCCCCChHHHHHHHHHHHHHHHHHH
Q 025842 190 GEILSAKLKNDCLVKIYPRVSHGWTVRYNVEDEFAVKSAEEAHEDMINWLT 240 (247)
Q Consensus 190 ~~~l~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~ 240 (247)
.+.. +.+++.+++++|.|... .....+.+.+|+.
T Consensus 172 ~~~~------~~~~i~i~~a~HFF~gK-----------l~~l~~~i~~~l~ 205 (210)
T COG2945 172 QESI------KITVITIPGADHFFHGK-----------LIELRDTIADFLE 205 (210)
T ss_pred hcCC------CCceEEecCCCceeccc-----------HHHHHHHHHHHhh
Confidence 6652 67899999999998763 5678888888883
No 74
>PRK05855 short chain dehydrogenase; Validated
Probab=99.72 E-value=4.2e-16 Score=137.29 Aligned_cols=191 Identities=14% Similarity=0.131 Sum_probs=126.3
Q ss_pred ceEEeecCceEEEeecCCCCCCeEEEEEcCccCCCcchHHHHHHHHHhcCcEEEEeccC-CCCCccCCCCcccchHHHHh
Q 025842 22 GTVQQLGGLNTYVTGSGPPDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRK 100 (247)
Q Consensus 22 ~~~~~~~~~~~~~~~p~~~~~~~~vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~~-~g~~~~~~~~~~~~~~~~~~ 100 (247)
..+.+.+++..++....+ ...++|||+||+. .+...|..++..| .+||.|+++|++ +|.|.........+.
T Consensus 5 ~~~~~~~g~~l~~~~~g~-~~~~~ivllHG~~-~~~~~w~~~~~~L-~~~~~Vi~~D~~G~G~S~~~~~~~~~~~----- 76 (582)
T PRK05855 5 RTVVSSDGVRLAVYEWGD-PDRPTVVLVHGYP-DNHEVWDGVAPLL-ADRFRVVAYDVRGAGRSSAPKRTAAYTL----- 76 (582)
T ss_pred EEEEeeCCEEEEEEEcCC-CCCCeEEEEcCCC-chHHHHHHHHHHh-hcceEEEEecCCCCCCCCCCCcccccCH-----
Confidence 445677888877765332 2467899999554 4557788899988 678999999999 777651111112222
Q ss_pred hcCCccccchHHHHHHHHHhcCCCeEEEEEecccHHHHHHhhcCC----CccEEEEecCCC-------------------
Q 025842 101 IHNTDKGYVDAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLASSH----DIQAAVVLHPGA------------------- 157 (247)
Q Consensus 101 ~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~----~i~~~v~~~~~~------------------- 157 (247)
+...+|+.++++.+.. ..++.++||||||.+++.++..+ .+..++.+++..
T Consensus 77 ----~~~a~dl~~~i~~l~~--~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (582)
T PRK05855 77 ----ARLADDFAAVIDAVSP--DRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSGPSLDHVGFWLRSGLRRPTPRR 150 (582)
T ss_pred ----HHHHHHHHHHHHHhCC--CCcEEEEecChHHHHHHHHHhCccchhhhhhheeccCCchHHHHHHHhhcccccchhh
Confidence 2333777777776521 23599999999999998776443 222222211100
Q ss_pred ---------C----------------------------------------------------------------Cccccc
Q 025842 158 ---------I----------------------------------------------------------------TVDDIN 164 (247)
Q Consensus 158 ---------~----------------------------------------------------------------~~~~~~ 164 (247)
. ......
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (582)
T PRK05855 151 LARALGQLLRSWYIYLFHLPVLPELLWRLGLGRAWPRLLRRVEGTPVDPIPTQTTLSDGAHGVKLYRANMIRSLSRPRER 230 (582)
T ss_pred hhHHHHHHhhhHHHHHHhCCCCcHHHhccchhhHHHHhhhhccCCCcchhhhhhhhccccchHHHHHhhhhhhhccCccC
Confidence 0 000112
Q ss_pred cccccEEEeecCCCCCCCHHHHHHHHHHHHhccCCCeeEEEeCCCCccccccCCCCChHHHHHHHHHHHHHHHHHHHH
Q 025842 165 EIKVPVAILGAEIDHVSPPEDLKRFGEILSAKLKNDCLVKIYPRVSHGWTVRYNVEDEFAVKSAEEAHEDMINWLTKY 242 (247)
Q Consensus 165 ~~~~P~l~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~ 242 (247)
.+++|+++++|++|.++|....+.+.+.++ ..+++.++ +||..... .++++.+.+.+|+.+.
T Consensus 231 ~~~~P~lii~G~~D~~v~~~~~~~~~~~~~-----~~~~~~~~-~gH~~~~e----------~p~~~~~~i~~fl~~~ 292 (582)
T PRK05855 231 YTDVPVQLIVPTGDPYVRPALYDDLSRWVP-----RLWRREIK-AGHWLPMS----------HPQVLAAAVAEFVDAV 292 (582)
T ss_pred CccCceEEEEeCCCcccCHHHhccccccCC-----cceEEEcc-CCCcchhh----------ChhHHHHHHHHHHHhc
Confidence 368999999999999999988888776653 45677777 58977653 4567888888888764
No 75
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.71 E-value=1.3e-16 Score=131.99 Aligned_cols=199 Identities=17% Similarity=0.236 Sum_probs=122.3
Q ss_pred eecCceEEEeecCC--CCCCeEEEEEcCccCCCc-c---------hHHHHH---HHHHhcCcEEEEeccC-C--CCCccC
Q 025842 26 QLGGLNTYVTGSGP--PDSKSAILLISDVFGYEA-P---------LFRKLA---DKVAGAGFLVVAPDFF-Y--GDPIVD 87 (247)
Q Consensus 26 ~~~~~~~~~~~p~~--~~~~~~vv~~hgg~g~~~-~---------~~~~~a---~~la~~G~~v~~~d~~-~--g~~~~~ 87 (247)
.++++..++....+ ....++||++||..+... . +|..++ ..|...+|.|+++|++ + |.+.
T Consensus 12 ~~~~~~~~y~~~g~~~~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~-- 89 (351)
T TIGR01392 12 VLSDVRVAYETYGTLNAERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTG-- 89 (351)
T ss_pred ccCCceEEEEeccccCCCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCC--
Confidence 45566666664332 233578999995444321 1 355553 3565788999999997 2 2222
Q ss_pred CCCcccchHHHH---hhcCCccccchHHHHHHHHHhcCCCe-EEEEEecccHHHHHHhhcCC--CccEEEEecCCCCC--
Q 025842 88 LNNPQFDREAWR---KIHNTDKGYVDAKSVIAALKSKGVSA-IGAAGFCWGGVVAAKLASSH--DIQAAVVLHPGAIT-- 159 (247)
Q Consensus 88 ~~~~~~~~~~~~---~~~~~~~~~~d~~~~i~~l~~~~~~~-i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~~~~~~-- 159 (247)
+......-..|. ..++.+...+|+.++++. .+.++ +.++||||||.+++.++..+ .++++|++++....
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---l~~~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~ 166 (351)
T TIGR01392 90 PSSINPGGRPYGSDFPLITIRDDVKAQKLLLDH---LGIEQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSARHSA 166 (351)
T ss_pred CCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHH---cCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEccCCcCCH
Confidence 211000000010 011223333555555544 46677 99999999999999988554 67777776543200
Q ss_pred --------------------------------------------------------------------------------
Q 025842 160 -------------------------------------------------------------------------------- 159 (247)
Q Consensus 160 -------------------------------------------------------------------------------- 159 (247)
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (351)
T TIGR01392 167 WCIAFNEVQRQAILADPNWNDGDYYEDGQPDRGLALARMLAHLTYRSEESMAERFGRAPQSGESPASGFDTRFQVESYLR 246 (351)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCHHHHHHHhCcCcccccccccccCccchHHHHHH
Confidence
Q ss_pred ----------------------------------ccccccccccEEEeecCCCCCCCHHHHHHHHHHHHhccCCCeeEE-
Q 025842 160 ----------------------------------VDDINEIKVPVAILGAEIDHVSPPEDLKRFGEILSAKLKNDCLVK- 204 (247)
Q Consensus 160 ----------------------------------~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~- 204 (247)
.+.++++++|+|+++|++|.++|.+.++.+.+.++. ....++++
T Consensus 247 ~~~~~~~~~~d~~~~~~~~~~l~~~d~~~~~~~~~~~l~~I~~P~Lvi~G~~D~~~p~~~~~~~a~~i~~-~~~~v~~~~ 325 (351)
T TIGR01392 247 YQGDKFVDRFDANSYLYLTRALDTHDLGRGRGSLTEALSRIKAPFLVVSITSDWLFPPAESRELAKALPA-AGLRVTYVE 325 (351)
T ss_pred HHHHHHHhhcCcchHHHHHHHHHhcCCcCCCCCHHHHHhhCCCCEEEEEeCCccccCHHHHHHHHHHHhh-cCCceEEEE
Confidence 011224578999999999999999999999999852 21112222
Q ss_pred EeCCCCccccccCCCCChHHHHHHHHHHHHHHHHHH
Q 025842 205 IYPRVSHGWTVRYNVEDEFAVKSAEEAHEDMINWLT 240 (247)
Q Consensus 205 ~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~ 240 (247)
+++++||..... .++++.+.+.+||+
T Consensus 326 i~~~~GH~~~le----------~p~~~~~~l~~FL~ 351 (351)
T TIGR01392 326 IESPYGHDAFLV----------ETDQVEELIRGFLR 351 (351)
T ss_pred eCCCCCcchhhc----------CHHHHHHHHHHHhC
Confidence 457899987663 46788888888874
No 76
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.71 E-value=3.3e-15 Score=117.79 Aligned_cols=167 Identities=16% Similarity=0.216 Sum_probs=115.1
Q ss_pred ceEEEeecCCCCCCeEEEEEcCccCCC----cchHHHHHHHHHhcCcEEEEeccC-CCCCccCCCCcccchHHHHhhcCC
Q 025842 30 LNTYVTGSGPPDSKSAILLISDVFGYE----APLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNT 104 (247)
Q Consensus 30 ~~~~~~~p~~~~~~~~vv~~hgg~g~~----~~~~~~~a~~la~~G~~v~~~d~~-~g~~~~~~~~~~~~~~~~~~~~~~ 104 (247)
+.++++.|...+++++||++|| ++.. ...+..+++.|+++||.|+.+|++ +|.+. ..........|
T Consensus 12 ~~~~~~~p~~~~~~~~VlllHG-~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~--g~~~~~~~~~~------ 82 (266)
T TIGR03101 12 RFCLYHPPVAVGPRGVVIYLPP-FAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSA--GDFAAARWDVW------ 82 (266)
T ss_pred EEEEEecCCCCCCceEEEEECC-CcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCC--CccccCCHHHH------
Confidence 4455554444445678999995 4422 234566889999999999999998 77764 11112233333
Q ss_pred ccccchHHHHHHHHHhcCCCeEEEEEecccHHHHHHhhcCC--CccEEEEecCCCCC-----------------------
Q 025842 105 DKGYVDAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLASSH--DIQAAVVLHPGAIT----------------------- 159 (247)
Q Consensus 105 ~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~~~~~~----------------------- 159 (247)
.+|+.++++++++.+..+++++||||||.+++.++.+. .++++|+++|....
T Consensus 83 ---~~Dv~~ai~~L~~~~~~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~~g~~~l~~~lrl~~~~~~~~~~~~~ 159 (266)
T TIGR03101 83 ---KEDVAAAYRWLIEQGHPPVTLWGLRLGALLALDAANPLAAKCNRLVLWQPVVSGKQQLQQFLRLRLVARRLGGESAE 159 (266)
T ss_pred ---HHHHHHHHHHHHhcCCCCEEEEEECHHHHHHHHHHHhCccccceEEEeccccchHHHHHHHHHHHHHHHhccccccc
Confidence 38899999999988778999999999999999987543 88999999986610
Q ss_pred -------------------------------cccccc---ccccEEEeecCCC-CCCCHHHHHHHHHHHHhccCCCeeEE
Q 025842 160 -------------------------------VDDINE---IKVPVAILGAEID-HVSPPEDLKRFGEILSAKLKNDCLVK 204 (247)
Q Consensus 160 -------------------------------~~~~~~---~~~P~l~i~g~~D-~~~~~~~~~~~~~~l~~~~~~~~~~~ 204 (247)
..++.. ...+++++.-..+ .--+.....++.+.+ ++.|+.++..
T Consensus 160 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~g~~v~~~ 238 (266)
T TIGR03101 160 ASNSLRERLLAGEDVEIAGYELAPALASDLDQRQLAPAVPKNCPVHWFEVRPEEGATLSPVFSRLGEQW-VQSGVEVTVD 238 (266)
T ss_pred cchhHHhhccCCCeEEEeceecCHHHHHHHHhcccCCCCCCCCceEEEEeccccCCCCCHHHHHHHHHH-HHcCCeEeee
Confidence 001111 1345677665322 222345667888888 7789999999
Q ss_pred EeCCC
Q 025842 205 IYPRV 209 (247)
Q Consensus 205 ~~~~~ 209 (247)
.++|-
T Consensus 239 ~~~~~ 243 (266)
T TIGR03101 239 LVPGP 243 (266)
T ss_pred ecCCc
Confidence 99975
No 77
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.71 E-value=2e-15 Score=106.15 Aligned_cols=185 Identities=18% Similarity=0.246 Sum_probs=123.5
Q ss_pred CCCCCCeEEEEEcCccC--CCcchHHHHHHHHHhcCcEEEEeccCC-C-CCc--c-CCCCcccchHHHHhhcCCccccch
Q 025842 38 GPPDSKSAILLISDVFG--YEAPLFRKLADKVAGAGFLVVAPDFFY-G-DPI--V-DLNNPQFDREAWRKIHNTDKGYVD 110 (247)
Q Consensus 38 ~~~~~~~~vv~~hgg~g--~~~~~~~~~a~~la~~G~~v~~~d~~~-g-~~~--~-~~~~~~~~~~~~~~~~~~~~~~~d 110 (247)
.+.++.+.+|++.||.| ..+..+...+..|+.+||.|..+++++ . ... . ++.....-..+|.
T Consensus 8 ~pag~~~~tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~----------- 76 (213)
T COG3571 8 DPAGPAPVTILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYI----------- 76 (213)
T ss_pred CCCCCCCEEEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCccccCCHHHH-----------
Confidence 44555565555555665 456778899999999999999999751 1 111 0 1221122212222
Q ss_pred HHHHHHHHHh-cCCCeEEEEEecccHHHHHHhhcCC--CccEEEEecCCC--------CCccccccccccEEEeecCCCC
Q 025842 111 AKSVIAALKS-KGVSAIGAAGFCWGGVVAAKLASSH--DIQAAVVLHPGA--------ITVDDINEIKVPVAILGAEIDH 179 (247)
Q Consensus 111 ~~~~i~~l~~-~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~~~~--------~~~~~~~~~~~P~l~i~g~~D~ 179 (247)
..+..++. ....+.++.|+||||.++.+++..- .|.++++++=.+ ...+.+..+++|++|.+|+.|+
T Consensus 77 --~~~aql~~~l~~gpLi~GGkSmGGR~aSmvade~~A~i~~L~clgYPfhppGKPe~~Rt~HL~gl~tPtli~qGtrD~ 154 (213)
T COG3571 77 --VAIAQLRAGLAEGPLIIGGKSMGGRVASMVADELQAPIDGLVCLGYPFHPPGKPEQLRTEHLTGLKTPTLITQGTRDE 154 (213)
T ss_pred --HHHHHHHhcccCCceeeccccccchHHHHHHHhhcCCcceEEEecCccCCCCCcccchhhhccCCCCCeEEeeccccc
Confidence 33334444 3556999999999999999988443 788888765222 2345678899999999999999
Q ss_pred CCCHHHHHHHHHHHHhccCCCeeEEEeCCCCccccccCCCCChHHHHHHHHHHHHHHHHHHH
Q 025842 180 VSPPEDLKRFGEILSAKLKNDCLVKIYPRVSHGWTVRYNVEDEFAVKSAEEAHEDMINWLTK 241 (247)
Q Consensus 180 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~ 241 (247)
+-..+.+..+. + .. ++|+++++++.|.+......+.-....+.+...+++..|.+.
T Consensus 155 fGtr~~Va~y~--l-s~---~iev~wl~~adHDLkp~k~vsgls~~~hL~~~A~~va~~~~~ 210 (213)
T COG3571 155 FGTRDEVAGYA--L-SD---PIEVVWLEDADHDLKPRKLVSGLSTADHLKTLAEQVAGWARR 210 (213)
T ss_pred ccCHHHHHhhh--c-CC---ceEEEEeccCccccccccccccccHHHHHHHHHHHHHHHHhh
Confidence 98877763322 2 22 789999999999986654433333334667777788888764
No 78
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=99.71 E-value=2.5e-16 Score=120.84 Aligned_cols=135 Identities=24% Similarity=0.312 Sum_probs=91.3
Q ss_pred chHHHHHHHHHhc---CCCeEEEEEecccHHHHHHhhcC-CCccEEEEecCCCCC-------------------------
Q 025842 109 VDAKSVIAALKSK---GVSAIGAAGFCWGGVVAAKLASS-HDIQAAVVLHPGAIT------------------------- 159 (247)
Q Consensus 109 ~d~~~~i~~l~~~---~~~~i~l~G~S~Gg~~a~~~a~~-~~i~~~v~~~~~~~~------------------------- 159 (247)
+-+..+++||+++ +.++|+|+|.|.||.+|+.+|.. +.|+++|+++|+...
T Consensus 4 Eyfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~~i~avVa~~ps~~~~~~~~~~~~~~~~lp~~~~~~~~~~ 83 (213)
T PF08840_consen 4 EYFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFPQISAVVAISPSSVVFQGIGFYRDSSKPLPYLPFDISKFS 83 (213)
T ss_dssp HHHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSSSEEEEEEES--SB--SSEEEETTE--EE----B-GGG-E
T ss_pred HHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCCCccEEEEeCCceeEecchhcccCCCccCCcCCcChhhce
Confidence 3467889999988 34799999999999999998855 499999999988610
Q ss_pred ------------------------ccccccccccEEEeecCCCCCCCHHHH-HHHHHHHHhccCC--CeeEEEeCCCCcc
Q 025842 160 ------------------------VDDINEIKVPVAILGAEIDHVSPPEDL-KRFGEILSAKLKN--DCLVKIYPRVSHG 212 (247)
Q Consensus 160 ------------------------~~~~~~~~~P~l~i~g~~D~~~~~~~~-~~~~~~l~~~~~~--~~~~~~~~~~~H~ 212 (247)
.-.+.++++|+|++.|++|.+.|.... +.+.+++ ++.+. ..+++.|+++||.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~a~IpvE~i~~piLli~g~dD~~WpS~~~a~~i~~rL-~~~~~~~~~~~l~Y~~aGH~ 162 (213)
T PF08840_consen 84 WNEPGLLRSRYAFELADDKAVEEARIPVEKIKGPILLISGEDDQIWPSSEMAEQIEERL-KAAGFPHNVEHLSYPGAGHL 162 (213)
T ss_dssp E-TTS-EE-TT-B--TTTGGGCCCB--GGG--SEEEEEEETT-SSS-HHHHHHHHHHHH-HCTT-----EEEEETTB-S-
T ss_pred ecCCcceehhhhhhcccccccccccccHHHcCCCEEEEEeCCCCccchHHHHHHHHHHH-HHhCCCCcceEEEcCCCCce
Confidence 113667899999999999999986655 4566777 44443 4789999999999
Q ss_pred ccccCCCCChH------------------HHHHHHHHHHHHHHHHHHHhc
Q 025842 213 WTVRYNVEDEF------------------AVKSAEEAHEDMINWLTKYVK 244 (247)
Q Consensus 213 ~~~~~~~~~~~------------------~~~~~~~~~~~~~~fl~~~~~ 244 (247)
+..++.+.... +..+.++.|+++++||+++|+
T Consensus 163 i~~Py~P~~~~~~~~~~~~~~~~GG~~~~~a~A~~dsW~~~l~Fl~~~L~ 212 (213)
T PF08840_consen 163 IEPPYFPHCRASYHKFIGTPLAWGGEPEAHAKAQEDSWKKILEFLRKHLG 212 (213)
T ss_dssp --STT-----EEEETTTTEEEE--B-HHHHHHHHHHHHHHHHHHHHHH--
T ss_pred ecCCCCCCcccccccccCCcccCCCChHHHHHHHHHHHHHHHHHHHHHhC
Confidence 97766544221 246899999999999999986
No 79
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.70 E-value=9.5e-16 Score=142.07 Aligned_cols=201 Identities=15% Similarity=0.196 Sum_probs=138.1
Q ss_pred CCCceEEeecCceEEEeecCCC-----CCCeEEEEEcCccCCCcchHHH-----HHHHHHhcCcEEEEeccCCCCCccCC
Q 025842 19 CGAGTVQQLGGLNTYVTGSGPP-----DSKSAILLISDVFGYEAPLFRK-----LADKVAGAGFLVVAPDFFYGDPIVDL 88 (247)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~p~~~-----~~~~~vv~~hgg~g~~~~~~~~-----~a~~la~~G~~v~~~d~~~g~~~~~~ 88 (247)
+|...+.+.+.+.++-+.|..+ ...++||++||+ +.+...|.. +...|+++||.|+++|+ |.+. .+
T Consensus 38 tp~~vv~~~~~~~l~~y~~~~~~~~~~~~~~plllvhg~-~~~~~~~d~~~~~s~v~~L~~~g~~v~~~d~--G~~~-~~ 113 (994)
T PRK07868 38 SPFQIVESVPMYRLRRYFPPDNRPGQPPVGPPVLMVHPM-MMSADMWDVTRDDGAVGILHRAGLDPWVIDF--GSPD-KV 113 (994)
T ss_pred CCCcEEEEcCcEEEEEeCCCCccccccCCCCcEEEECCC-CCCccceecCCcccHHHHHHHCCCEEEEEcC--CCCC-hh
Confidence 4555566777788888866442 345899999954 444445543 47889999999999996 5443 11
Q ss_pred CC-cccchHHHHhhcCCccccchHHHHHHHHHhcCCCeEEEEEecccHHHHHHhhc-C-C-CccEEEEecCCC-------
Q 025842 89 NN-PQFDREAWRKIHNTDKGYVDAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLAS-S-H-DIQAAVVLHPGA------- 157 (247)
Q Consensus 89 ~~-~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~-~-~-~i~~~v~~~~~~------- 157 (247)
.. ....+ ...+..+.++++.+++...+++.++||||||.+++.++. . + +|+.++++....
T Consensus 114 ~~~~~~~l---------~~~i~~l~~~l~~v~~~~~~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~~~~~~ 184 (994)
T PRK07868 114 EGGMERNL---------ADHVVALSEAIDTVKDVTGRDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDTLAALP 184 (994)
T ss_pred HcCccCCH---------HHHHHHHHHHHHHHHHhhCCceEEEEEChhHHHHHHHHHhcCCCccceEEEEecccccCCCCc
Confidence 11 01111 112234556666665565568999999999999988763 3 3 688877522110
Q ss_pred -----------------------------------------------------------------------C---C----
Q 025842 158 -----------------------------------------------------------------------I---T---- 159 (247)
Q Consensus 158 -----------------------------------------------------------------------~---~---- 159 (247)
. .
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~p~~~~~~~~~~~~~l~~~~~~~~~e~~~~~~~~~~w~~~~g~ 264 (994)
T PRK07868 185 MGIPAGLAAAAADFMADHVFNRLDIPGWMARTGFQMLDPVKTAKARVDFLRQLHDREALLPREQQRRFLESEGWIAWSGP 264 (994)
T ss_pred ccchhhhhhcccccchhhhhhcCCCCHHHHHHHHHhcChhHHHHHHHHHHHhcCchhhhccchhhHhHHHHhhccccchH
Confidence 0 0
Q ss_pred -------------------------ccccccccccEEEeecCCCCCCCHHHHHHHHHHHHhccCCCeeE-EEeCCCCccc
Q 025842 160 -------------------------VDDINEIKVPVAILGAEIDHVSPPEDLKRFGEILSAKLKNDCLV-KIYPRVSHGW 213 (247)
Q Consensus 160 -------------------------~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~H~~ 213 (247)
...+.++++|+|+++|++|+++|++..+.+.+.++ ..++ .+++++||.-
T Consensus 265 ~~~~~~~~~~~~n~~~~g~~~~~~~~~~L~~i~~P~L~i~G~~D~ivp~~~~~~l~~~i~-----~a~~~~~~~~~GH~g 339 (994)
T PRK07868 265 AISELLKQFIAHNRMMTGGFAINGQMVTLADITCPVLAFVGEVDDIGQPASVRGIRRAAP-----NAEVYESLIRAGHFG 339 (994)
T ss_pred HHHHHHHHHHHhCcccCceEEECCEEcchhhCCCCEEEEEeCCCCCCCHHHHHHHHHhCC-----CCeEEEEeCCCCCEe
Confidence 01356788999999999999999999999988874 4555 5668899986
Q ss_pred cccCCCCChHHHHHHHHHHHHHHHHHHHHhc
Q 025842 214 TVRYNVEDEFAVKSAEEAHEDMINWLTKYVK 244 (247)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~ 244 (247)
...+. ...++.|..+.+||+++-.
T Consensus 340 ~~~g~-------~a~~~~wp~i~~wl~~~~~ 363 (994)
T PRK07868 340 LVVGS-------RAAQQTWPTVADWVKWLEG 363 (994)
T ss_pred eeech-------hhhhhhChHHHHHHHHhcc
Confidence 65544 3688999999999998643
No 80
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.70 E-value=1.3e-15 Score=120.35 Aligned_cols=187 Identities=20% Similarity=0.227 Sum_probs=125.8
Q ss_pred cCceEEEeecCCC-CCCeEEEEEcCccCCCcchHHHHHHHHHhcCcEEEEeccC-CCCCccCCCCccc-chHHHHhhcCC
Q 025842 28 GGLNTYVTGSGPP-DSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQF-DREAWRKIHNT 104 (247)
Q Consensus 28 ~~~~~~~~~p~~~-~~~~~vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~~-~g~~~~~~~~~~~-~~~~~~~~~~~ 104 (247)
++...|...-.++ ..+.++|++| |+|.....|..-.+.|+. .+.|.++|++ .|.|..+....+. ....
T Consensus 74 ~~~~iw~~~~~~~~~~~~plVliH-GyGAg~g~f~~Nf~~La~-~~~vyaiDllG~G~SSRP~F~~d~~~~e~------- 144 (365)
T KOG4409|consen 74 NGIEIWTITVSNESANKTPLVLIH-GYGAGLGLFFRNFDDLAK-IRNVYAIDLLGFGRSSRPKFSIDPTTAEK------- 144 (365)
T ss_pred CCceeEEEeecccccCCCcEEEEe-ccchhHHHHHHhhhhhhh-cCceEEecccCCCCCCCCCCCCCcccchH-------
Confidence 4456666543333 3468899999 666555677777778876 7999999998 5654311111111 0011
Q ss_pred ccccchHHHHHHHHHhcCCCeEEEEEecccHHHHHHhhcCC--CccEEEEecCCCCC-----------------------
Q 025842 105 DKGYVDAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLASSH--DIQAAVVLHPGAIT----------------------- 159 (247)
Q Consensus 105 ~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~~~~~~----------------------- 159 (247)
.-++.+-+|-.+.+..+++|+|||+||+++..+|.++ +|+.+|+++|+...
T Consensus 145 ----~fvesiE~WR~~~~L~KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~~~~~~~~~~~~~~~w~~~~~~~ 220 (365)
T KOG4409|consen 145 ----EFVESIEQWRKKMGLEKMILVGHSFGGYLAAKYALKYPERVEKLILVSPWGFPEKPDSEPEFTKPPPEWYKALFLV 220 (365)
T ss_pred ----HHHHHHHHHHHHcCCcceeEeeccchHHHHHHHHHhChHhhceEEEecccccccCCCcchhhcCCChHHHhhhhhh
Confidence 1122333344445778999999999999999999776 99999999988600
Q ss_pred -------------------------------------------------------------------------ccccccc
Q 025842 160 -------------------------------------------------------------------------VDDINEI 166 (247)
Q Consensus 160 -------------------------------------------------------------------------~~~~~~~ 166 (247)
.+.+..+
T Consensus 221 ~~~~nPl~~LR~~Gp~Gp~Lv~~~~~d~~~k~~~~~~ed~l~~YiY~~n~~~psgE~~fk~l~~~~g~Ar~Pm~~r~~~l 300 (365)
T KOG4409|consen 221 ATNFNPLALLRLMGPLGPKLVSRLRPDRFRKFPSLIEEDFLHEYIYHCNAQNPSGETAFKNLFEPGGWARRPMIQRLREL 300 (365)
T ss_pred hhcCCHHHHHHhccccchHHHhhhhHHHHHhccccchhHHHHHHHHHhcCCCCcHHHHHHHHHhccchhhhhHHHHHHhh
Confidence 1123334
Q ss_pred c--ccEEEeecCCCCCCCHHHHHHHHHHHHhccCCCeeEEEeCCCCccccccCCCCChHHHHHHHHHHHHHHHHHHH
Q 025842 167 K--VPVAILGAEIDHVSPPEDLKRFGEILSAKLKNDCLVKIYPRVSHGWTVRYNVEDEFAVKSAEEAHEDMINWLTK 241 (247)
Q Consensus 167 ~--~P~l~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~ 241 (247)
+ +|+++|+|++| ..+......+.+.+. ...++.++++++||-...+ .++...+.++.+++.
T Consensus 301 ~~~~pv~fiyG~~d-WmD~~~g~~~~~~~~---~~~~~~~~v~~aGHhvylD----------np~~Fn~~v~~~~~~ 363 (365)
T KOG4409|consen 301 KKDVPVTFIYGDRD-WMDKNAGLEVTKSLM---KEYVEIIIVPGAGHHVYLD----------NPEFFNQIVLEECDK 363 (365)
T ss_pred ccCCCEEEEecCcc-cccchhHHHHHHHhh---cccceEEEecCCCceeecC----------CHHHHHHHHHHHHhc
Confidence 4 99999999766 445555566666542 2278999999999987776 346788888887764
No 81
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.69 E-value=1.4e-15 Score=145.85 Aligned_cols=183 Identities=13% Similarity=0.156 Sum_probs=123.7
Q ss_pred CCeEEEEEcCccCCCcchHHHHHHHHHhcCcEEEEeccC-CCCCccCCCCcccchHHHHhhcCCccccchHHHHHHHHHh
Q 025842 42 SKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKS 120 (247)
Q Consensus 42 ~~~~vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~ 120 (247)
..++|||+||+.+ +...|..++..|.. +|.|+++|++ +|.+. .......... ....+.+...+++.++++ +
T Consensus 1370 ~~~~vVllHG~~~-s~~~w~~~~~~L~~-~~rVi~~Dl~G~G~S~-~~~~~~~~~~--~~~~si~~~a~~l~~ll~---~ 1441 (1655)
T PLN02980 1370 EGSVVLFLHGFLG-TGEDWIPIMKAISG-SARCISIDLPGHGGSK-IQNHAKETQT--EPTLSVELVADLLYKLIE---H 1441 (1655)
T ss_pred CCCeEEEECCCCC-CHHHHHHHHHHHhC-CCEEEEEcCCCCCCCC-Cccccccccc--cccCCHHHHHHHHHHHHH---H
Confidence 3578999995544 55688889998855 5999999998 77654 1111000000 000111222344444444 3
Q ss_pred cCCCeEEEEEecccHHHHHHhhcCC--CccEEEEecCCCC----------------------------------------
Q 025842 121 KGVSAIGAAGFCWGGVVAAKLASSH--DIQAAVVLHPGAI---------------------------------------- 158 (247)
Q Consensus 121 ~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~~~~~---------------------------------------- 158 (247)
.+.+++.++||||||.+++.++.++ +++++|++++...
T Consensus 1442 l~~~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~ 1521 (1655)
T PLN02980 1442 ITPGKVTLVGYSMGARIALYMALRFSDKIEGAVIISGSPGLKDEVARKIRSAKDDSRARMLIDHGLEIFLENWYSGELWK 1521 (1655)
T ss_pred hCCCCEEEEEECHHHHHHHHHHHhChHhhCEEEEECCCCccCchHHHHHHhhhhhHHHHHHHhhhHHHHHHHhccHHHhh
Confidence 4667999999999999999988654 8999888775420
Q ss_pred C--------------------------------------ccccccccccEEEeecCCCCCCCHHHHHHHHHHHHhc-c--
Q 025842 159 T--------------------------------------VDDINEIKVPVAILGAEIDHVSPPEDLKRFGEILSAK-L-- 197 (247)
Q Consensus 159 ~--------------------------------------~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~l~~~-~-- 197 (247)
. .+.+.++++|+|+++|++|..++ +.++++.+.++.. .
T Consensus 1522 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dl~~~L~~I~~PtLlI~Ge~D~~~~-~~a~~~~~~i~~a~~~~ 1600 (1655)
T PLN02980 1522 SLRNHPHFNKIVASRLLHKDVPSLAKLLSDLSIGRQPSLWEDLKQCDTPLLLVVGEKDVKFK-QIAQKMYREIGKSKESG 1600 (1655)
T ss_pred hhccCHHHHHHHHHHHhcCCHHHHHHHHHHhhhcccchHHHHHhhCCCCEEEEEECCCCccH-HHHHHHHHHcccccccc
Confidence 0 01245678899999999999875 5667777776421 0
Q ss_pred ----CCCeeEEEeCCCCccccccCCCCChHHHHHHHHHHHHHHHHHHHHh
Q 025842 198 ----KNDCLVKIYPRVSHGWTVRYNVEDEFAVKSAEEAHEDMINWLTKYV 243 (247)
Q Consensus 198 ----~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~ 243 (247)
...+++++++++||..... .++++.+.+.+||++.-
T Consensus 1601 ~~~~~~~a~lvvI~~aGH~~~lE----------~Pe~f~~~I~~FL~~~~ 1640 (1655)
T PLN02980 1601 NDKGKEIIEIVEIPNCGHAVHLE----------NPLPVIRALRKFLTRLH 1640 (1655)
T ss_pred ccccccceEEEEECCCCCchHHH----------CHHHHHHHHHHHHHhcc
Confidence 0135899999999987663 56789999999998754
No 82
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.67 E-value=6.4e-15 Score=126.10 Aligned_cols=176 Identities=15% Similarity=0.183 Sum_probs=124.7
Q ss_pred ceEEeecCceEEEeecCCCC-CCeEEEEEcCccCCCcchH-----HHHHHHHHhcCcEEEEeccC-CCCCccCCCCcccc
Q 025842 22 GTVQQLGGLNTYVTGSGPPD-SKSAILLISDVFGYEAPLF-----RKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFD 94 (247)
Q Consensus 22 ~~~~~~~~~~~~~~~p~~~~-~~~~vv~~hgg~g~~~~~~-----~~~a~~la~~G~~v~~~d~~-~g~~~~~~~~~~~~ 94 (247)
..+.+.+.++++-+.|..+. .++|||++|+.... ..-+ +.+++.|+++||.|+++|++ +|.+. .. ..
T Consensus 166 ~VV~~~~~~eLi~Y~P~t~~~~~~PlLiVp~~i~k-~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~--~~---~~ 239 (532)
T TIGR01838 166 AVVFENELFQLIQYEPTTETVHKTPLLIVPPWINK-YYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQ--AD---KT 239 (532)
T ss_pred eEEEECCcEEEEEeCCCCCcCCCCcEEEECccccc-ceeeecccchHHHHHHHHCCcEEEEEECCCCCccc--cc---CC
Confidence 33446666888888665433 56889999966542 1111 47999999999999999997 55543 11 11
Q ss_pred hHHHHhhcCCccccchHHHHHHHHHhc-CCCeEEEEEecccHHHHHH-----hhcC-C-CccEEEEecCCC---------
Q 025842 95 REAWRKIHNTDKGYVDAKSVIAALKSK-GVSAIGAAGFCWGGVVAAK-----LASS-H-DIQAAVVLHPGA--------- 157 (247)
Q Consensus 95 ~~~~~~~~~~~~~~~d~~~~i~~l~~~-~~~~i~l~G~S~Gg~~a~~-----~a~~-~-~i~~~v~~~~~~--------- 157 (247)
...+. .+++.++++.+.+. +.+++.++|||+||.++.. .+.. + +|++++++....
T Consensus 240 ~ddY~--------~~~i~~al~~v~~~~g~~kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~~~G~l~ 311 (532)
T TIGR01838 240 FDDYI--------RDGVIAALEVVEAITGEKQVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFSDPGELG 311 (532)
T ss_pred hhhhH--------HHHHHHHHHHHHHhcCCCCeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCCCcchhh
Confidence 11222 14577788887764 7789999999999998522 3333 3 789888877554
Q ss_pred --------------------------------------------------------------------------------
Q 025842 158 -------------------------------------------------------------------------------- 157 (247)
Q Consensus 158 -------------------------------------------------------------------------------- 157 (247)
T Consensus 312 ~f~~~~~~~~~e~~~~~~G~lpg~~m~~~F~~lrp~~l~w~~~v~~yl~g~~~~~fdll~Wn~D~t~lP~~~~~~~lr~l 391 (532)
T TIGR01838 312 VFVDEEIVAGIERQNGGGGYLDGRQMAVTFSLLRENDLIWNYYVDNYLKGKSPVPFDLLFWNSDSTNLPGKMHNFYLRNL 391 (532)
T ss_pred hhcCchhHHHHHHHHHhcCCCCHHHHHHHHHhcChhhHHHHHHHHHHhcCCCccchhHHHHhccCccchHHHHHHHHHHH
Confidence
Q ss_pred --------------CCccccccccccEEEeecCCCCCCCHHHHHHHHHHHHhccCCCeeEEEeCCCCcccccc
Q 025842 158 --------------ITVDDINEIKVPVAILGAEIDHVSPPEDLKRFGEILSAKLKNDCLVKIYPRVSHGWTVR 216 (247)
Q Consensus 158 --------------~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~H~~~~~ 216 (247)
....++.++++|+|++.|++|.++|.+.+..+.+.++ ..+..+++++||.....
T Consensus 392 y~~N~L~~G~~~v~g~~~dL~~I~vPvLvV~G~~D~IvP~~sa~~l~~~i~-----~~~~~vL~~sGHi~~ie 459 (532)
T TIGR01838 392 YLQNALTTGGLEVCGVRLDLSKVKVPVYIIATREDHIAPWQSAYRGAALLG-----GPKTFVLGESGHIAGVV 459 (532)
T ss_pred HhcCCCcCCeeEECCEecchhhCCCCEEEEeeCCCCcCCHHHHHHHHHHCC-----CCEEEEECCCCCchHhh
Confidence 0123577899999999999999999999998888773 44667888899987643
No 83
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.67 E-value=9.3e-16 Score=112.99 Aligned_cols=159 Identities=21% Similarity=0.214 Sum_probs=118.1
Q ss_pred CCCeEEEEEcCccCCC--cchHHHHHHHHHhcCcEEEEeccC-CCCCccCCCCcccchHHHHhhcCCccccchHHHHHHH
Q 025842 41 DSKSAILLISDVFGYE--APLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAA 117 (247)
Q Consensus 41 ~~~~~vv~~hgg~g~~--~~~~~~~a~~la~~G~~v~~~d~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~ 117 (247)
+....+|++| |+-++ ...+..+|..|++.||.++.+|++ .|.|. ++. . .-.....++|+..++++
T Consensus 31 gs~e~vvlcH-GfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~---gsf--~------~Gn~~~eadDL~sV~q~ 98 (269)
T KOG4667|consen 31 GSTEIVVLCH-GFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESE---GSF--Y------YGNYNTEADDLHSVIQY 98 (269)
T ss_pred CCceEEEEee-ccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcC---Ccc--c------cCcccchHHHHHHHHHH
Confidence 4566788888 44433 234567889999999999999997 55544 111 1 11222334899999999
Q ss_pred HHhcCCCeEEEEEecccHHHHHHhhcCC-CccEEEEecCCCCC-------------------------------------
Q 025842 118 LKSKGVSAIGAAGFCWGGVVAAKLASSH-DIQAAVVLHPGAIT------------------------------------- 159 (247)
Q Consensus 118 l~~~~~~~i~l~G~S~Gg~~a~~~a~~~-~i~~~v~~~~~~~~------------------------------------- 159 (247)
+.....---+++|||-||..++.++.+. .+.-++.+++.++.
T Consensus 99 ~s~~nr~v~vi~gHSkGg~Vvl~ya~K~~d~~~viNcsGRydl~~~I~eRlg~~~l~~ike~Gfid~~~rkG~y~~rvt~ 178 (269)
T KOG4667|consen 99 FSNSNRVVPVILGHSKGGDVVLLYASKYHDIRNVINCSGRYDLKNGINERLGEDYLERIKEQGFIDVGPRKGKYGYRVTE 178 (269)
T ss_pred hccCceEEEEEEeecCccHHHHHHHHhhcCchheEEcccccchhcchhhhhcccHHHHHHhCCceecCcccCCcCceecH
Confidence 9876544456899999999999988665 88888888877611
Q ss_pred -----------ccccc--cccccEEEeecCCCCCCCHHHHHHHHHHHHhccCCCeeEEEeCCCCcccccc
Q 025842 160 -----------VDDIN--EIKVPVAILGAEIDHVSPPEDLKRFGEILSAKLKNDCLVKIYPRVSHGWTVR 216 (247)
Q Consensus 160 -----------~~~~~--~~~~P~l~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~H~~~~~ 216 (247)
.+... ..+||+|-+||..|.+||.+.+.++.+.++ +..+.++||+.|.|...
T Consensus 179 eSlmdrLntd~h~aclkId~~C~VLTvhGs~D~IVPve~AkefAk~i~-----nH~L~iIEgADHnyt~~ 243 (269)
T KOG4667|consen 179 ESLMDRLNTDIHEACLKIDKQCRVLTVHGSEDEIVPVEDAKEFAKIIP-----NHKLEIIEGADHNYTGH 243 (269)
T ss_pred HHHHHHHhchhhhhhcCcCccCceEEEeccCCceeechhHHHHHHhcc-----CCceEEecCCCcCccch
Confidence 01111 346899999999999999999999999985 57899999999998763
No 84
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=99.65 E-value=1.3e-14 Score=129.58 Aligned_cols=203 Identities=16% Similarity=0.172 Sum_probs=137.4
Q ss_pred eecCceEE--EeecC---CCCCCeEEEEEcCccCC---CcchHHHHHH-HHHhcCcEEEEeccCCCCCccCCCCcccchH
Q 025842 26 QLGGLNTY--VTGSG---PPDSKSAILLISDVFGY---EAPLFRKLAD-KVAGAGFLVVAPDFFYGDPIVDLNNPQFDRE 96 (247)
Q Consensus 26 ~~~~~~~~--~~~p~---~~~~~~~vv~~hgg~g~---~~~~~~~~a~-~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~ 96 (247)
.++|+.++ +..|+ +..+.|.+|..|||.+. .......+.. .....|++|+.+|+| |.+. . +.++.
T Consensus 504 ~~~~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~~~s~~g~~v~~vd~R-Gs~~--~---G~~~~ 577 (755)
T KOG2100|consen 504 EIDGITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEVVVSSRGFAVLQVDGR-GSGG--Y---GWDFR 577 (755)
T ss_pred EeccEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeEEecHHHHhhccCCeEEEEEcCC-CcCC--c---chhHH
Confidence 44665543 33453 23345667777877751 1111122333 345679999999996 4322 0 01111
Q ss_pred HHHhhcCCccccchHHHHHHHHHhc---CCCeEEEEEecccHHHHHHhhcCC---CccEEEEecCCCCC-----------
Q 025842 97 AWRKIHNTDKGYVDAKSVIAALKSK---GVSAIGAAGFCWGGVVAAKLASSH---DIQAAVVLHPGAIT----------- 159 (247)
Q Consensus 97 ~~~~~~~~~~~~~d~~~~i~~l~~~---~~~~i~l~G~S~Gg~~a~~~a~~~---~i~~~v~~~~~~~~----------- 159 (247)
......--...+.|...+++++.+. |.+||+++|+|.||++++.++... -+++.++++|...-
T Consensus 578 ~~~~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~~~yds~~tery 657 (755)
T KOG2100|consen 578 SALPRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTDWLYYDSTYTERY 657 (755)
T ss_pred HHhhhhcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceeeeeeecccccHhh
Confidence 1111111133446777777776665 678999999999999999977544 45555898888621
Q ss_pred ----------------ccccccccccE-EEeecCCCCCCCHHHHHHHHHHHHhccCCCeeEEEeCCCCccccccCCCCCh
Q 025842 160 ----------------VDDINEIKVPV-AILGAEIDHVSPPEDLKRFGEILSAKLKNDCLVKIYPRVSHGWTVRYNVEDE 222 (247)
Q Consensus 160 ----------------~~~~~~~~~P~-l~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~H~~~~~~~~~~~ 222 (247)
...+..++.|. |++||+.|..|+.+.+..+.+.| +..|++.++.+||+.+|++....
T Consensus 658 mg~p~~~~~~y~e~~~~~~~~~~~~~~~LliHGt~DdnVh~q~s~~~~~aL-~~~gv~~~~~vypde~H~is~~~----- 731 (755)
T KOG2100|consen 658 MGLPSENDKGYEESSVSSPANNIKTPKLLLIHGTEDDNVHFQQSAILIKAL-QNAGVPFRLLVYPDENHGISYVE----- 731 (755)
T ss_pred cCCCccccchhhhccccchhhhhccCCEEEEEcCCcCCcCHHHHHHHHHHH-HHCCCceEEEEeCCCCccccccc-----
Confidence 12244455565 99999999999999999999999 77899999999999999997753
Q ss_pred HHHHHHHHHHHHHHHHHHHHhc
Q 025842 223 FAVKSAEEAHEDMINWLTKYVK 244 (247)
Q Consensus 223 ~~~~~~~~~~~~~~~fl~~~~~ 244 (247)
........+..||...+.
T Consensus 732 ----~~~~~~~~~~~~~~~~~~ 749 (755)
T KOG2100|consen 732 ----VISHLYEKLDRFLRDCFG 749 (755)
T ss_pred ----chHHHHHHHHHHHHHHcC
Confidence 346889999999996654
No 85
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.65 E-value=3.2e-15 Score=115.03 Aligned_cols=148 Identities=24% Similarity=0.281 Sum_probs=106.8
Q ss_pred EEEEcCccC--CCcchHHHHHHHHHh-cCcEEEEeccC-CCCCccCCCCcccchHHHHhhcCCccccchHHHHHHHHHhc
Q 025842 46 ILLISDVFG--YEAPLFRKLADKVAG-AGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSK 121 (247)
Q Consensus 46 vv~~hgg~g--~~~~~~~~~a~~la~-~G~~v~~~d~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~ 121 (247)
||++|||.- .+......++..+++ .|+.|+++||| ... .......+|+.++++|+.++
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~p~------------------~~~p~~~~D~~~a~~~l~~~ 62 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLAPE------------------APFPAALEDVKAAYRWLLKN 62 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---TTT------------------SSTTHHHHHHHHHHHHHHHT
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeecccccc------------------ccccccccccccceeeeccc
Confidence 789996542 233444667778876 89999999997 211 12233458999999999876
Q ss_pred ------CCCeEEEEEecccHHHHHHhhcC------CCccEEEEecCCCCC------------------------------
Q 025842 122 ------GVSAIGAAGFCWGGVVAAKLASS------HDIQAAVVLHPGAIT------------------------------ 159 (247)
Q Consensus 122 ------~~~~i~l~G~S~Gg~~a~~~a~~------~~i~~~v~~~~~~~~------------------------------ 159 (247)
+.++|+++|+|.||.+++.++.. ..++++++++|....
T Consensus 63 ~~~~~~d~~~i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (211)
T PF07859_consen 63 ADKLGIDPERIVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWTDLQDFDGPSYDDSNENKDDPFLPAPKIDWFWK 142 (211)
T ss_dssp HHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSSTSTSSCHHHHHHHHHSTTSSSBHHHHHHHHH
T ss_pred cccccccccceEEeecccccchhhhhhhhhhhhcccchhhhhcccccccchhcccccccccccccccccccccccccccc
Confidence 46799999999999999998731 269999999987411
Q ss_pred ------------ccccc--cc--cccEEEeecCCCCCCCHHHHHHHHHHHHhccCCCeeEEEeCCCCcccc
Q 025842 160 ------------VDDIN--EI--KVPVAILGAEIDHVSPPEDLKRFGEILSAKLKNDCLVKIYPRVSHGWT 214 (247)
Q Consensus 160 ------------~~~~~--~~--~~P~l~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~H~~~ 214 (247)
...+. .. -+|+++++|+.|.++ +....+.+++ ++.|+++++++++|..|+|.
T Consensus 143 ~~~~~~~~~~~~~sp~~~~~~~~~Pp~~i~~g~~D~l~--~~~~~~~~~L-~~~gv~v~~~~~~g~~H~f~ 210 (211)
T PF07859_consen 143 LYLPGSDRDDPLASPLNASDLKGLPPTLIIHGEDDVLV--DDSLRFAEKL-KKAGVDVELHVYPGMPHGFF 210 (211)
T ss_dssp HHHSTGGTTSTTTSGGGSSCCTTCHEEEEEEETTSTTH--HHHHHHHHHH-HHTT-EEEEEEETTEETTGG
T ss_pred cccccccccccccccccccccccCCCeeeeccccccch--HHHHHHHHHH-HHCCCCEEEEEECCCeEEee
Confidence 00010 11 359999999999875 5678999999 67899999999999999985
No 86
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=99.64 E-value=5.4e-14 Score=113.62 Aligned_cols=191 Identities=16% Similarity=0.196 Sum_probs=139.7
Q ss_pred eecCceEEEeecCCC---CCCeEEEEEcCccC----CCcchHHHHHHHHHh-cCcEEEEeccC-CCCCccCCCCcccchH
Q 025842 26 QLGGLNTYVTGSGPP---DSKSAILLISDVFG----YEAPLFRKLADKVAG-AGFLVVAPDFF-YGDPIVDLNNPQFDRE 96 (247)
Q Consensus 26 ~~~~~~~~~~~p~~~---~~~~~vv~~hgg~g----~~~~~~~~~a~~la~-~G~~v~~~d~~-~g~~~~~~~~~~~~~~ 96 (247)
..+++...+++|... ...|.||++|||.- .....+..+..++++ .+..|+++||| -.+..
T Consensus 70 ~~~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPEh~----------- 138 (336)
T KOG1515|consen 70 PFTNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPEHP----------- 138 (336)
T ss_pred CCCCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCCCC-----------
Confidence 457788888887542 45788999996542 134456677788854 59999999997 22211
Q ss_pred HHHhhcCCccccchHHHHHHHHHhc-------CCCeEEEEEecccHHHHHHhhc--------CCCccEEEEecCCCCC--
Q 025842 97 AWRKIHNTDKGYVDAKSVIAALKSK-------GVSAIGAAGFCWGGVVAAKLAS--------SHDIQAAVVLHPGAIT-- 159 (247)
Q Consensus 97 ~~~~~~~~~~~~~d~~~~i~~l~~~-------~~~~i~l~G~S~Gg~~a~~~a~--------~~~i~~~v~~~~~~~~-- 159 (247)
+....+|..+++.|+.++ |.++|+++|-|.||.+|..+|. ..++++.|+++|.+..
T Consensus 139 -------~Pa~y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~ 211 (336)
T KOG1515|consen 139 -------FPAAYDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTD 211 (336)
T ss_pred -------CCccchHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCC
Confidence 122237777777777763 6789999999999999998761 1289999999999810
Q ss_pred -------------------------------------------c-----ccccccc-ccEEEeecCCCCCCCHHHHHHHH
Q 025842 160 -------------------------------------------V-----DDINEIK-VPVAILGAEIDHVSPPEDLKRFG 190 (247)
Q Consensus 160 -------------------------------------------~-----~~~~~~~-~P~l~i~g~~D~~~~~~~~~~~~ 190 (247)
. .+..... .|+|++.++.|.+. +....+.
T Consensus 212 ~~~~e~~~~~~~~~~~~~~~~~~~w~~~lP~~~~~~~~p~~np~~~~~~~d~~~~~lp~tlv~~ag~D~L~--D~~~~Y~ 289 (336)
T KOG1515|consen 212 RTESEKQQNLNGSPELARPKIDKWWRLLLPNGKTDLDHPFINPVGNSLAKDLSGLGLPPTLVVVAGYDVLR--DEGLAYA 289 (336)
T ss_pred CCCHHHHHhhcCCcchhHHHHHHHHHHhCCCCCCCcCCccccccccccccCccccCCCceEEEEeCchhhh--hhhHHHH
Confidence 0 0111222 45999999999877 6677889
Q ss_pred HHHHhccCCCeeEEEeCCCCccccccCCCCChHHHHHHHHHHHHHHHHHHHH
Q 025842 191 EILSAKLKNDCLVKIYPRVSHGWTVRYNVEDEFAVKSAEEAHEDMINWLTKY 242 (247)
Q Consensus 191 ~~l~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~ 242 (247)
++| .+.|+++++..++++.|+|....... ....+..+++.+|+++.
T Consensus 290 ~~L-kk~Gv~v~~~~~e~~~H~~~~~~~~~-----~~a~~~~~~i~~fi~~~ 335 (336)
T KOG1515|consen 290 EKL-KKAGVEVTLIHYEDGFHGFHILDPSS-----KEAHALMDAIVEFIKSN 335 (336)
T ss_pred HHH-HHcCCeEEEEEECCCeeEEEecCCch-----hhHHHHHHHHHHHHhhc
Confidence 999 78899999999999999998765541 25678999999999864
No 87
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.64 E-value=4.9e-15 Score=110.41 Aligned_cols=186 Identities=22% Similarity=0.309 Sum_probs=134.6
Q ss_pred ceEEEeecCCCCCCeEEEEEcCccCCCcchHHHHHHHHHhcCcEEEEeccC-CCCCccCCCC---cccchHHHHhhcCCc
Q 025842 30 LNTYVTGSGPPDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNN---PQFDREAWRKIHNTD 105 (247)
Q Consensus 30 ~~~~~~~p~~~~~~~~vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~~-~g~~~~~~~~---~~~~~~~~~~~~~~~ 105 (247)
+.++.+ +..++.+.-|++.++.|.....++.+|...+.+||.|+++||| .|.|. +.. ...++.+|..
T Consensus 18 l~~~~~--pA~~~~~g~~~va~a~Gv~~~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~--p~~~~~~~~~~~DwA~----- 88 (281)
T COG4757 18 LPGQRF--PADGKASGRLVVAGATGVGQYFYRRFAAAAAKAGFEVLTFDYRGIGQSR--PASLSGSQWRYLDWAR----- 88 (281)
T ss_pred Cccccc--cCCCCCCCcEEecccCCcchhHhHHHHHHhhccCceEEEEecccccCCC--ccccccCccchhhhhh-----
Confidence 334444 4555556566666688877778899999999999999999998 55544 322 3356667765
Q ss_pred cccchHHHHHHHHHhc-CCCeEEEEEecccHHHHHHhhcCCCccEEEEecCCC---------------------------
Q 025842 106 KGYVDAKSVIAALKSK-GVSAIGAAGFCWGGVVAAKLASSHDIQAAVVLHPGA--------------------------- 157 (247)
Q Consensus 106 ~~~~d~~~~i~~l~~~-~~~~i~l~G~S~Gg~~a~~~a~~~~i~~~v~~~~~~--------------------------- 157 (247)
.|+.++++.+++. ...+...+|||+||.+.-.+...++..+...+....
T Consensus 89 ---~D~~aal~~~~~~~~~~P~y~vgHS~GGqa~gL~~~~~k~~a~~vfG~gagwsg~m~~~~~l~~~~l~~lv~p~lt~ 165 (281)
T COG4757 89 ---LDFPAALAALKKALPGHPLYFVGHSFGGQALGLLGQHPKYAAFAVFGSGAGWSGWMGLRERLGAVLLWNLVGPPLTF 165 (281)
T ss_pred ---cchHHHHHHHHhhCCCCceEEeeccccceeecccccCcccceeeEeccccccccchhhhhcccceeeccccccchhh
Confidence 8999999999885 557999999999999877766555444444333221
Q ss_pred -----------------------------------------CCccccccccccEEEeecCCCCCCCHHHHHHHHHHHHhc
Q 025842 158 -----------------------------------------ITVDDINEIKVPVAILGAEIDHVSPPEDLKRFGEILSAK 196 (247)
Q Consensus 158 -----------------------------------------~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~l~~~ 196 (247)
...+.++.+.+|++++...+|+.+|+...+.+.+....
T Consensus 166 w~g~~p~~l~G~G~d~p~~v~RdW~RwcR~p~y~fddp~~~~~~q~yaaVrtPi~~~~~~DD~w~P~As~d~f~~~y~n- 244 (281)
T COG4757 166 WKGYMPKDLLGLGSDLPGTVMRDWARWCRHPRYYFDDPAMRNYRQVYAAVRTPITFSRALDDPWAPPASRDAFASFYRN- 244 (281)
T ss_pred ccccCcHhhcCCCccCcchHHHHHHHHhcCccccccChhHhHHHHHHHHhcCceeeeccCCCCcCCHHHHHHHHHhhhc-
Confidence 00123566889999999999999999999999998833
Q ss_pred cCCCeeEEEeCCC----CccccccCCCCChHHHHHHHHHHHHHHHHH
Q 025842 197 LKNDCLVKIYPRV----SHGWTVRYNVEDEFAVKSAEEAHEDMINWL 239 (247)
Q Consensus 197 ~~~~~~~~~~~~~----~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl 239 (247)
.+.++..++.+ ||.-.... ..+..|++++.||
T Consensus 245 --Apl~~~~~~~~~~~lGH~gyfR~---------~~Ealwk~~L~w~ 280 (281)
T COG4757 245 --APLEMRDLPRAEGPLGHMGYFRE---------PFEALWKEMLGWF 280 (281)
T ss_pred --CcccceecCcccCcccchhhhcc---------chHHHHHHHHHhh
Confidence 27777777754 77543331 2378999999997
No 88
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=99.63 E-value=8.3e-15 Score=121.34 Aligned_cols=199 Identities=14% Similarity=0.225 Sum_probs=109.9
Q ss_pred CCCeEEEEEcCccCCCcchHHHHHHHHHhcCcEEEEeccCCCCCccCCC-Cccc--ch---------------H------
Q 025842 41 DSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDLN-NPQF--DR---------------E------ 96 (247)
Q Consensus 41 ~~~~~vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~-~~~~--~~---------------~------ 96 (247)
++.|.|||.| |.|++...+..++..||++||.|+++|++.|....... .... .. .
T Consensus 98 ~~~PvvIFSH-Glgg~R~~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (379)
T PF03403_consen 98 GKFPVVIFSH-GLGGSRTSYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPEE 176 (379)
T ss_dssp S-EEEEEEE---TT--TTTTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GGG
T ss_pred CCCCEEEEeC-CCCcchhhHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccchh
Confidence 4567777777 55545577889999999999999999998553210000 0000 00 0
Q ss_pred HHH-hhcCCccccchHHHHHHHHHhc-----------------------CCCeEEEEEecccHHHHHHhhc-CCCccEEE
Q 025842 97 AWR-KIHNTDKGYVDAKSVIAALKSK-----------------------GVSAIGAAGFCWGGVVAAKLAS-SHDIQAAV 151 (247)
Q Consensus 97 ~~~-~~~~~~~~~~d~~~~i~~l~~~-----------------------~~~~i~l~G~S~Gg~~a~~~a~-~~~i~~~v 151 (247)
.+. +..-.+....++..+++.|++. +.++|+++|||+||..++.++. +.+++++|
T Consensus 177 ~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d~r~~~~I 256 (379)
T PF03403_consen 177 EFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQDTRFKAGI 256 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH-TT--EEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhccCcceEE
Confidence 000 0000122334566677666531 2358999999999999999774 45999999
Q ss_pred EecCCCCCc--cccccccccEEEeecCCCCCCCHHHHHHHHHHHHhccCCCeeEEEeCCCCccccccCCCCChH------
Q 025842 152 VLHPGAITV--DDINEIKVPVAILGAEIDHVSPPEDLKRFGEILSAKLKNDCLVKIYPRVSHGWTVRYNVEDEF------ 223 (247)
Q Consensus 152 ~~~~~~~~~--~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~------ 223 (247)
++.|+..+. +....++.|+|+|+.+. +.-......+.+.. ..+....+..+.|..|.-..+-....|.
T Consensus 257 ~LD~W~~Pl~~~~~~~i~~P~L~InSe~--f~~~~~~~~~~~~~--~~~~~~~~~ti~gt~H~s~sD~~ll~P~~l~~~~ 332 (379)
T PF03403_consen 257 LLDPWMFPLGDEIYSKIPQPLLFINSES--FQWWENIFRMKKVI--SNNKESRMLTIKGTAHLSFSDFPLLSPWLLGKFL 332 (379)
T ss_dssp EES---TTS-GGGGGG--S-EEEEEETT--T--HHHHHHHHTT----TTS-EEEEEETT--GGGGSGGGGTS-HHHHHHT
T ss_pred EeCCcccCCCcccccCCCCCEEEEECcc--cCChhhHHHHHHHh--ccCCCcEEEEECCCcCCCcchhhhhhHHHHHHHh
Confidence 999988643 34567889999998853 33333444444433 1234678889999999876554433331
Q ss_pred ------HH-HHHHHHHHHHHHHHHHHhc
Q 025842 224 ------AV-KSAEEAHEDMINWLTKYVK 244 (247)
Q Consensus 224 ------~~-~~~~~~~~~~~~fl~~~~~ 244 (247)
++ .+.+...+.+++||+++|+
T Consensus 333 ~~~g~~dp~~a~~i~~~~~l~FL~~~L~ 360 (379)
T PF03403_consen 333 GLKGSIDPERALRINNRASLAFLRRHLG 360 (379)
T ss_dssp TSS-SS-HHHHHHHHHHHHHHHHHHHHT
T ss_pred ccccCcCHHHHHHHHHHHHHHHHHHhcC
Confidence 11 4577788899999999986
No 89
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=99.61 E-value=5.2e-14 Score=118.57 Aligned_cols=196 Identities=16% Similarity=0.172 Sum_probs=141.6
Q ss_pred ceEEEeecC---CCCCCeEEEEEcCccCCCcc--hH----HHHHHHHHhcCcEEEEeccCCCCCccCCCCcccchHHHHh
Q 025842 30 LNTYVTGSG---PPDSKSAILLISDVFGYEAP--LF----RKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRK 100 (247)
Q Consensus 30 ~~~~~~~p~---~~~~~~~vv~~hgg~g~~~~--~~----~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~ 100 (247)
+.+.++.|. +..+.|.++++.||.+.+-- .+ .--...||++||.|+.+|-| |... .+..++.|++
T Consensus 626 lYgmiyKPhn~~pgkkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnR-GS~h-----RGlkFE~~ik 699 (867)
T KOG2281|consen 626 LYGMIYKPHNFQPGKKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNR-GSAH-----RGLKFESHIK 699 (867)
T ss_pred EEEEEEccccCCCCCCCceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCC-Cccc-----cchhhHHHHh
Confidence 445566553 34457899999998873211 11 11235789999999999995 4321 2345667777
Q ss_pred hcCCccccchHHHHHHHHHhc----CCCeEEEEEecccHHHHHHhh-cCCCccEE-EEecCCCC----------------
Q 025842 101 IHNTDKGYVDAKSVIAALKSK----GVSAIGAAGFCWGGVVAAKLA-SSHDIQAA-VVLHPGAI---------------- 158 (247)
Q Consensus 101 ~~~~~~~~~d~~~~i~~l~~~----~~~~i~l~G~S~Gg~~a~~~a-~~~~i~~~-v~~~~~~~---------------- 158 (247)
...-...++|-.+.+++|.++ +.+||++-|||.||+++++.. ..++|-.+ |+-.|...
T Consensus 700 ~kmGqVE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGapVT~W~~YDTgYTERYMg~P 779 (867)
T KOG2281|consen 700 KKMGQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAPVTDWRLYDTGYTERYMGYP 779 (867)
T ss_pred hccCeeeehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcCcceeeEEeccCcceeeeeecccchhhhcCCC
Confidence 776677778888888888886 568999999999999999955 55555443 33333220
Q ss_pred --------------CccccccccccEEEeecCCCCCCCHHHHHHHHHHHHhccCCCeeEEEeCCCCccccccCCCCChHH
Q 025842 159 --------------TVDDINEIKVPVAILGAEIDHVSPPEDLKRFGEILSAKLKNDCLVKIYPRVSHGWTVRYNVEDEFA 224 (247)
Q Consensus 159 --------------~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~ 224 (247)
..+.+.+-....|++||--|.-|.......+...+ .++|++.++++||+..|+.-..
T Consensus 780 ~~nE~gY~agSV~~~VeklpdepnRLlLvHGliDENVHF~Hts~Lvs~l-vkagKpyeL~IfP~ERHsiR~~-------- 850 (867)
T KOG2281|consen 780 DNNEHGYGAGSVAGHVEKLPDEPNRLLLVHGLIDENVHFAHTSRLVSAL-VKAGKPYELQIFPNERHSIRNP-------- 850 (867)
T ss_pred ccchhcccchhHHHHHhhCCCCCceEEEEecccccchhhhhHHHHHHHH-HhCCCceEEEEccccccccCCC--------
Confidence 01234444456999999999999999999999999 7889999999999999997554
Q ss_pred HHHHHHHHHHHHHHHHH
Q 025842 225 VKSAEEAHEDMINWLTK 241 (247)
Q Consensus 225 ~~~~~~~~~~~~~fl~~ 241 (247)
++....-.+++.|+++
T Consensus 851 -es~~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 851 -ESGIYYEARLLHFLQE 866 (867)
T ss_pred -ccchhHHHHHHHHHhh
Confidence 2446677788888875
No 90
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.60 E-value=1.8e-14 Score=113.59 Aligned_cols=176 Identities=20% Similarity=0.255 Sum_probs=130.0
Q ss_pred CCCCCeEEEEEcCccCCCcchHHHHHHHHHhc-CcEEEEeccC-CCCCccCCCCcccchHHHHhhcCCccccchHHHHHH
Q 025842 39 PPDSKSAILLISDVFGYEAPLFRKLADKVAGA-GFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIA 116 (247)
Q Consensus 39 ~~~~~~~vv~~hgg~g~~~~~~~~~a~~la~~-G~~v~~~d~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~ 116 (247)
.-...|+++++||.+|. ..+|+.++..|+.. |-.|+++|.| ||.+. .. ...+.+..++|+..+++
T Consensus 48 ~~~~~Pp~i~lHGl~GS-~~Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp-~~-----------~~h~~~~ma~dv~~Fi~ 114 (315)
T KOG2382|consen 48 NLERAPPAIILHGLLGS-KENWRSVAKNLSRKLGRDVYAVDVRNHGSSP-KI-----------TVHNYEAMAEDVKLFID 114 (315)
T ss_pred ccCCCCceEEecccccC-CCCHHHHHHHhcccccCceEEEecccCCCCc-cc-----------cccCHHHHHHHHHHHHH
Confidence 34467999999988886 48999999999865 8899999999 99864 11 11223444588888888
Q ss_pred HHHhc-CCCeEEEEEecccH-HHHHHhhc-CC-CccEEEEec--CCC---------------------------------
Q 025842 117 ALKSK-GVSAIGAAGFCWGG-VVAAKLAS-SH-DIQAAVVLH--PGA--------------------------------- 157 (247)
Q Consensus 117 ~l~~~-~~~~i~l~G~S~Gg-~~a~~~a~-~~-~i~~~v~~~--~~~--------------------------------- 157 (247)
..... ...++.++|||||| .+++..+. .+ .+..++... |..
T Consensus 115 ~v~~~~~~~~~~l~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~~~~e~~e~i~~m~~~d~~~~~~~~rke~~~ 194 (315)
T KOG2382|consen 115 GVGGSTRLDPVVLLGHSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGRSYGEYRELIKAMIQLDLSIGVSRGRKEALK 194 (315)
T ss_pred HcccccccCCceecccCcchHHHHHHHHHhcCcccceeEEEecCCccCCcccchHHHHHHHHHhccccccccccHHHHHH
Confidence 88644 34699999999999 55555443 33 555555432 311
Q ss_pred -------------------C----------------------------Ccccc--ccccccEEEeecCCCCCCCHHHHHH
Q 025842 158 -------------------I----------------------------TVDDI--NEIKVPVAILGAEIDHVSPPEDLKR 188 (247)
Q Consensus 158 -------------------~----------------------------~~~~~--~~~~~P~l~i~g~~D~~~~~~~~~~ 188 (247)
. ...++ .....|+|+++|.++..++.+.-..
T Consensus 195 ~l~~~~~d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~~~~~~pvlfi~g~~S~fv~~~~~~~ 274 (315)
T KOG2382|consen 195 SLIEVGFDNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILSYWADLEDGPYTGPVLFIKGLQSKFVPDEHYPR 274 (315)
T ss_pred HHHHHhcchHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhcccccccccccccceeEEecCCCCCcChhHHHH
Confidence 0 00112 4556899999999999999998888
Q ss_pred HHHHHHhccCCCeeEEEeCCCCccccccCCCCChHHHHHHHHHHHHHHHHHHHH
Q 025842 189 FGEILSAKLKNDCLVKIYPRVSHGWTVRYNVEDEFAVKSAEEAHEDMINWLTKY 242 (247)
Q Consensus 189 ~~~~l~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~ 242 (247)
+.+..+ .+++++++++||..... .++++++.+.+|+.+.
T Consensus 275 ~~~~fp-----~~e~~~ld~aGHwVh~E----------~P~~~~~~i~~Fl~~~ 313 (315)
T KOG2382|consen 275 MEKIFP-----NVEVHELDEAGHWVHLE----------KPEEFIESISEFLEEP 313 (315)
T ss_pred HHHhcc-----chheeecccCCceeecC----------CHHHHHHHHHHHhccc
Confidence 888875 68999999999988774 5689999999988754
No 91
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.60 E-value=6.5e-14 Score=122.34 Aligned_cols=115 Identities=16% Similarity=0.108 Sum_probs=81.6
Q ss_pred ceEEEeecCCCCCCeEEEEEcCccCCCcc----hHHHHHHHHHhcCcEEEEeccC-CCCCccCCCCcccchHHHHhhcCC
Q 025842 30 LNTYVTGSGPPDSKSAILLISDVFGYEAP----LFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNT 104 (247)
Q Consensus 30 ~~~~~~~p~~~~~~~~vv~~hgg~g~~~~----~~~~~a~~la~~G~~v~~~d~~-~g~~~~~~~~~~~~~~~~~~~~~~ 104 (247)
+.++++.|...++.|+||++| +++.+.. .....+..|+++||.|+++|+| +|.|.+... . ..
T Consensus 9 L~~~~~~P~~~~~~P~Il~~~-gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~----~-------~~- 75 (550)
T TIGR00976 9 LAIDVYRPAGGGPVPVILSRT-PYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFD----L-------LG- 75 (550)
T ss_pred EEEEEEecCCCCCCCEEEEec-CCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCceE----e-------cC-
Confidence 445667665555678888888 5554321 2233567899999999999998 666541110 0 01
Q ss_pred ccccchHHHHHHHHHhc--CCCeEEEEEecccHHHHHHhhcCC--CccEEEEecCCC
Q 025842 105 DKGYVDAKSVIAALKSK--GVSAIGAAGFCWGGVVAAKLASSH--DIQAAVVLHPGA 157 (247)
Q Consensus 105 ~~~~~d~~~~i~~l~~~--~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~~~~ 157 (247)
....+|+.++++++.++ ...+|+++|+|+||.+++.+|... .+++++...+..
T Consensus 76 ~~~~~D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~ 132 (550)
T TIGR00976 76 SDEAADGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVW 132 (550)
T ss_pred cccchHHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCCceeEEeecCccc
Confidence 34568999999999887 236999999999999999988653 888888766554
No 92
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.58 E-value=4.3e-13 Score=103.83 Aligned_cols=192 Identities=19% Similarity=0.249 Sum_probs=128.3
Q ss_pred EEEeecCCCCCCeEEEEEcCccCCCcchHHHHHHHHHhcCcEEEEeccC-CCCCccCCCCcccchHHHHhhcCCccccch
Q 025842 32 TYVTGSGPPDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKGYVD 110 (247)
Q Consensus 32 ~~~~~p~~~~~~~~vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d 110 (247)
..++.|...+..|.+||+| |+......|..+.+++|+.||.|+.+|++ ..... . ....++
T Consensus 6 l~v~~P~~~g~yPVv~f~~-G~~~~~s~Ys~ll~hvAShGyIVV~~d~~~~~~~~---~---------------~~~~~~ 66 (259)
T PF12740_consen 6 LLVYYPSSAGTYPVVLFLH-GFLLINSWYSQLLEHVASHGYIVVAPDLYSIGGPD---D---------------TDEVAS 66 (259)
T ss_pred eEEEecCCCCCcCEEEEeC-CcCCCHHHHHHHHHHHHhCceEEEEecccccCCCC---c---------------chhHHH
Confidence 4455567777888888888 55566677899999999999999999974 11111 0 011245
Q ss_pred HHHHHHHHHhc-----------CCCeEEEEEecccHHHHHHhhcCC-------CccEEEEecCCCCC------------c
Q 025842 111 AKSVIAALKSK-----------GVSAIGAAGFCWGGVVAAKLASSH-------DIQAAVVLHPGAIT------------V 160 (247)
Q Consensus 111 ~~~~i~~l~~~-----------~~~~i~l~G~S~Gg~~a~~~a~~~-------~i~~~v~~~~~~~~------------~ 160 (247)
+.++++|+.+. |..+++++|||.||-++..++... ++++++++.|.... .
T Consensus 67 ~~~vi~Wl~~~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVdG~~~~~~~~P~v~~~ 146 (259)
T PF12740_consen 67 AAEVIDWLAKGLESKLPLGVKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVDGMSKGSQTEPPVLTY 146 (259)
T ss_pred HHHHHHHHHhcchhhccccccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEeccccccccccCCCCccccC
Confidence 56667776552 446999999999999999877432 89999999988721 0
Q ss_pred -cccccccccEEEeecCCCC---------CCCH-HHHHHHHHHHHhccCCCeeEEEeCCCCccccccCC---CC------
Q 025842 161 -DDINEIKVPVAILGAEIDH---------VSPP-EDLKRFGEILSAKLKNDCLVKIYPRVSHGWTVRYN---VE------ 220 (247)
Q Consensus 161 -~~~~~~~~P~l~i~g~~D~---------~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~H~~~~~~~---~~------ 220 (247)
..-.+...|++++-...+. ..|. .+-++|++.+ .. +.-..+..+.||.=..+.. ..
T Consensus 147 ~p~s~~~~~P~lviGtGLg~~~~~~~~~~CaP~g~n~~~Ff~~~-~~---p~~~~v~~~~GH~d~LDd~~~~~~~~~~~~ 222 (259)
T PF12740_consen 147 TPQSFDFSMPALVIGTGLGGEPRNPLFPPCAPAGVNYREFFDEC-KP---PSWHFVAKDYGHMDFLDDDTPGYVGLCLFR 222 (259)
T ss_pred cccccCCCCCeEEEecccCcccccccCCCCCCCCCCHHHHHHhc-CC---CEEEEEeCCCCchHhhcCCCcchhHHHHHH
Confidence 1112245899998766663 2232 3346788877 32 5556666789996554433 10
Q ss_pred --Ch----HHHHHHHHHHHHHHHHHHHHhccC
Q 025842 221 --DE----FAVKSAEEAHEDMINWLTKYVKRD 246 (247)
Q Consensus 221 --~~----~~~~~~~~~~~~~~~fl~~~~~~~ 246 (247)
+. ......+-....++.|++.++.++
T Consensus 223 ~~Ck~g~~~~~~~r~f~~g~~vAfl~~~l~g~ 254 (259)
T PF12740_consen 223 CLCKNGPDDRDPMRRFVGGIMVAFLNAQLQGD 254 (259)
T ss_pred hhccCCCCCHHHHHHHHHHHHHHHHHHHhcCc
Confidence 11 112566777788999999988764
No 93
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.57 E-value=1.8e-13 Score=111.46 Aligned_cols=183 Identities=20% Similarity=0.277 Sum_probs=118.8
Q ss_pred CCCeEEEEEcCccCCCc-chHHHHHHHHHhcCcEEEEeccCCCCCccCCCCcccchHHHHhhcCCccccchHHHHHHHHH
Q 025842 41 DSKSAILLISDVFGYEA-PLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALK 119 (247)
Q Consensus 41 ~~~~~vv~~hgg~g~~~-~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~ 119 (247)
+..|.||++||..|.+. ...+.++....++||.|++++.| |.....-..+.. -.....+|+.+++++++
T Consensus 123 ~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~R-G~~g~~LtTpr~---------f~ag~t~Dl~~~v~~i~ 192 (409)
T KOG1838|consen 123 GTDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHR-GLGGSKLTTPRL---------FTAGWTEDLREVVNHIK 192 (409)
T ss_pred CCCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCC-CCCCCccCCCce---------eecCCHHHHHHHHHHHH
Confidence 35689999998776543 34567888888899999999997 432201111111 11334489999999999
Q ss_pred hc-CCCeEEEEEecccHHHHHHhh-cCC---Cc-cEEEEecCCC------------------------------------
Q 025842 120 SK-GVSAIGAAGFCWGGVVAAKLA-SSH---DI-QAAVVLHPGA------------------------------------ 157 (247)
Q Consensus 120 ~~-~~~~i~l~G~S~Gg~~a~~~a-~~~---~i-~~~v~~~~~~------------------------------------ 157 (247)
+. +..++..+|+||||.+...+. ... ++ .|+.+.+|+-
T Consensus 193 ~~~P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~~~~~~~~~~~~~~~~y~~~l~~~l~~~~~~~r~~~ 272 (409)
T KOG1838|consen 193 KRYPQAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDLLAASRSIETPLYRRFYNRALTLNLKRIVLRHRHTL 272 (409)
T ss_pred HhCCCCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccchhhhhhhHHhcccchHHHHHHHHHhHHHHHhhhhhhh
Confidence 87 556899999999999999865 222 44 4444555554
Q ss_pred ----------------------------------------CCccccccccccEEEeecCCCCCCCHHHHHHHHHHHHhcc
Q 025842 158 ----------------------------------------ITVDDINEIKVPVAILGAEIDHVSPPEDLKRFGEILSAKL 197 (247)
Q Consensus 158 ----------------------------------------~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~l~~~~ 197 (247)
.....+.++++|+|+|++.+|+++|.+..-. .+.. +
T Consensus 273 ~~~~vd~d~~~~~~SvreFD~~~t~~~~gf~~~deYY~~aSs~~~v~~I~VP~L~ina~DDPv~p~~~ip~-~~~~-~-- 348 (409)
T KOG1838|consen 273 FEDPVDFDVILKSRSVREFDEALTRPMFGFKSVDEYYKKASSSNYVDKIKVPLLCINAADDPVVPEEAIPI-DDIK-S-- 348 (409)
T ss_pred hhccchhhhhhhcCcHHHHHhhhhhhhcCCCcHHHHHhhcchhhhcccccccEEEEecCCCCCCCcccCCH-HHHh-c--
Confidence 1134678899999999999999999764322 2222 2
Q ss_pred CCCeeEEEeCCCCccccccCCCCChHHHHHHHHHHHH-HHHHHHHHh
Q 025842 198 KNDCLVKIYPRVSHGWTVRYNVEDEFAVKSAEEAHED-MINWLTKYV 243 (247)
Q Consensus 198 ~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~-~~~fl~~~~ 243 (247)
+..+-+.+-..+||.-...+-. + ......++ +.+||.+..
T Consensus 349 np~v~l~~T~~GGHlgfleg~~--p----~~~~w~~~~l~ef~~~~~ 389 (409)
T KOG1838|consen 349 NPNVLLVITSHGGHLGFLEGLW--P----SARTWMDKLLVEFLGNAI 389 (409)
T ss_pred CCcEEEEEeCCCceeeeeccCC--C----ccchhHHHHHHHHHHHHH
Confidence 3366677777778943333211 0 12334444 677776543
No 94
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=99.57 E-value=3.9e-15 Score=119.97 Aligned_cols=173 Identities=22% Similarity=0.298 Sum_probs=95.6
Q ss_pred ceEEEeecCC-CCCCeEEEEEcCccCCCcch------------------HHHHHHHHHhcCcEEEEeccC-CCCCccCCC
Q 025842 30 LNTYVTGSGP-PDSKSAILLISDVFGYEAPL------------------FRKLADKVAGAGFLVVAPDFF-YGDPIVDLN 89 (247)
Q Consensus 30 ~~~~~~~p~~-~~~~~~vv~~hgg~g~~~~~------------------~~~~a~~la~~G~~v~~~d~~-~g~~~~~~~ 89 (247)
+++|+.+|.. +++.|+||++|| .|...+. ...++..|+.+||.|+++|.+ .|... ...
T Consensus 101 vpaylLvPd~~~~p~PAVL~lHg-Hg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYVvla~D~~g~GER~-~~e 178 (390)
T PF12715_consen 101 VPAYLLVPDGAKGPFPAVLCLHG-HGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYVVLAPDALGFGERG-DME 178 (390)
T ss_dssp EEEEEEEETT--S-EEEEEEE---TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSEEEEE--TTSGGG--SSC
T ss_pred EEEEEEecCCCCCCCCEEEEeCC-CCCCcccccCCcccccccchhhccccccHHHHHHhCCCEEEEEccccccccc-ccc
Confidence 7899999877 677889999983 3321111 134788999999999999998 66533 222
Q ss_pred Ccc----cchHHH---Hhh--cCC-ccccchHHHHHHHHHhc---CCCeEEEEEecccHHHHHHhh-cCCCccEEEEecC
Q 025842 90 NPQ----FDREAW---RKI--HNT-DKGYVDAKSVIAALKSK---GVSAIGAAGFCWGGVVAAKLA-SSHDIQAAVVLHP 155 (247)
Q Consensus 90 ~~~----~~~~~~---~~~--~~~-~~~~~d~~~~i~~l~~~---~~~~i~l~G~S~Gg~~a~~~a-~~~~i~~~v~~~~ 155 (247)
... .++..+ ... .+. .-..-|...+++||.++ +.+||+++|+||||..++.+| .+.+|++.|+.+-
T Consensus 179 ~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaALDdRIka~v~~~~ 258 (390)
T PF12715_consen 179 GAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAALDDRIKATVANGY 258 (390)
T ss_dssp CCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH-TT--EEEEES-
T ss_pred ccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHcchhhHhHhhhhh
Confidence 111 111111 110 111 11123455689999987 568999999999999999987 5669988876432
Q ss_pred CCC-------------------------------Ccccccc---c--cccEEEeecCCCCCCCHHHHHHHHHHHHhccCC
Q 025842 156 GAI-------------------------------TVDDINE---I--KVPVAILGAEIDHVSPPEDLKRFGEILSAKLKN 199 (247)
Q Consensus 156 ~~~-------------------------------~~~~~~~---~--~~P~l~i~g~~D~~~~~~~~~~~~~~l~~~~~~ 199 (247)
... ..-++.. + ..|+|++.|..|.++|. ++..++... ...
T Consensus 259 l~~~~~~~~~mt~~~~~~~~~~~~~~~~~iPgl~r~~D~PdIasliAPRPll~~nG~~Dklf~i--V~~AY~~~~--~p~ 334 (390)
T PF12715_consen 259 LCTTQERALLMTMPNNNGLRGFPNCICNYIPGLWRYFDFPDIASLIAPRPLLFENGGKDKLFPI--VRRAYAIMG--APD 334 (390)
T ss_dssp B--HHHHHHHB----TTS----SS-GGG--TTCCCC--HHHHHHTTTTS-EEESS-B-HHHHHH--HHHHHHHTT---GG
T ss_pred hhccchhhHhhccccccccCcCcchhhhhCccHHhhCccHHHHHHhCCCcchhhcCCcccccHH--HHHHHHhcC--CCc
Confidence 210 0001111 1 35899999999998754 677777653 223
Q ss_pred CeeEEEeCC
Q 025842 200 DCLVKIYPR 208 (247)
Q Consensus 200 ~~~~~~~~~ 208 (247)
+.+++.||+
T Consensus 335 n~~~~~~p~ 343 (390)
T PF12715_consen 335 NFQIHHYPK 343 (390)
T ss_dssp GEEE---GG
T ss_pred ceEEeeccc
Confidence 778888885
No 95
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.57 E-value=1.3e-13 Score=123.47 Aligned_cols=162 Identities=15% Similarity=0.136 Sum_probs=117.9
Q ss_pred HHHHHHHhcCcEEEEeccC-CCCCccCCCCcccchHHHHhhcCCccccchHHHHHHHHHhc-----------------CC
Q 025842 62 KLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSK-----------------GV 123 (247)
Q Consensus 62 ~~a~~la~~G~~v~~~d~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~-----------------~~ 123 (247)
.+.+.|+.+||.|+.+|.| .|.|.+... .. .....+|..++|+|+..+ -.
T Consensus 270 ~~~~~~~~rGYaVV~~D~RGtg~SeG~~~----~~--------~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~Wsn 337 (767)
T PRK05371 270 SLNDYFLPRGFAVVYVSGIGTRGSDGCPT----TG--------DYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSN 337 (767)
T ss_pred hHHHHHHhCCeEEEEEcCCCCCCCCCcCc----cC--------CHHHHHHHHHHHHHHhhCCccccccccccccccCCCC
Confidence 4668899999999999997 444431110 00 022348899999999853 14
Q ss_pred CeEEEEEecccHHHHHHhhcC--CCccEEEEecCCCC-------------------------------------------
Q 025842 124 SAIGAAGFCWGGVVAAKLASS--HDIQAAVVLHPGAI------------------------------------------- 158 (247)
Q Consensus 124 ~~i~l~G~S~Gg~~a~~~a~~--~~i~~~v~~~~~~~------------------------------------------- 158 (247)
.+|+++|.|+||.+++.+|.. +.++++|...+...
T Consensus 338 GkVGm~G~SY~G~~~~~aAa~~pp~LkAIVp~a~is~~yd~yr~~G~~~~~~g~~ged~d~l~~~~~~r~~~~~~~~~~~ 417 (767)
T PRK05371 338 GKVAMTGKSYLGTLPNAVATTGVEGLETIIPEAAISSWYDYYRENGLVRAPGGYQGEDLDVLAELTYSRNLLAGDYLRHN 417 (767)
T ss_pred CeeEEEEEcHHHHHHHHHHhhCCCcceEEEeeCCCCcHHHHhhcCCceeccCCcCCcchhhHHHHhhhcccCcchhhcch
Confidence 699999999999999987743 38888887654320
Q ss_pred -----------------------------CccccccccccEEEeecCCCCCCCHHHHHHHHHHHHhccCCCeeEEEeCCC
Q 025842 159 -----------------------------TVDDINEIKVPVAILGAEIDHVSPPEDLKRFGEILSAKLKNDCLVKIYPRV 209 (247)
Q Consensus 159 -----------------------------~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 209 (247)
....+.++++|+|++||..|..++.+.+.++++.+ ++.+++.++.+.++
T Consensus 418 ~~~~~~~~~~~~~~~~~~~~y~~fW~~rn~~~~~~kIkvPvLlIhGw~D~~V~~~~s~~ly~aL-~~~g~pkkL~l~~g- 495 (767)
T PRK05371 418 EACEKLLAELTAAQDRKTGDYNDFWDDRNYLKDADKIKASVLVVHGLNDWNVKPKQVYQWWDAL-PENGVPKKLFLHQG- 495 (767)
T ss_pred HHHHHHHhhhhhhhhhcCCCccHHHHhCCHhhHhhCCCCCEEEEeeCCCCCCChHHHHHHHHHH-HhcCCCeEEEEeCC-
Confidence 00123468899999999999999999999999998 44566788877775
Q ss_pred CccccccCCCCChHHHHHHHHHHHHHHHHHHHHhccC
Q 025842 210 SHGWTVRYNVEDEFAVKSAEEAHEDMINWLTKYVKRD 246 (247)
Q Consensus 210 ~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~~ 246 (247)
+|..... ....+..+.+++||+++|++.
T Consensus 496 ~H~~~~~---------~~~~d~~e~~~~Wfd~~LkG~ 523 (767)
T PRK05371 496 GHVYPNN---------WQSIDFRDTMNAWFTHKLLGI 523 (767)
T ss_pred CccCCCc---------hhHHHHHHHHHHHHHhccccC
Confidence 7865332 124577889999999998753
No 96
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.56 E-value=6.1e-14 Score=107.46 Aligned_cols=114 Identities=24% Similarity=0.254 Sum_probs=83.1
Q ss_pred CceEEEeecCCCCCCeEEEEEcCccCCCcchHHHHHHHHHhc-CcEEEEeccC-CCCCccCCCCcccchHHHHhhcCCcc
Q 025842 29 GLNTYVTGSGPPDSKSAILLISDVFGYEAPLFRKLADKVAGA-GFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDK 106 (247)
Q Consensus 29 ~~~~~~~~p~~~~~~~~vv~~hgg~g~~~~~~~~~a~~la~~-G~~v~~~d~~-~g~~~~~~~~~~~~~~~~~~~~~~~~ 106 (247)
.++.|+..|. .+..+|++++||.|.+...|..++..|.++ -.+|+++|+| ||.+..... .. .+.+.
T Consensus 61 t~n~Y~t~~~--~t~gpil~l~HG~G~S~LSfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e-~d---------lS~eT 128 (343)
T KOG2564|consen 61 TFNVYLTLPS--ATEGPILLLLHGGGSSALSFAIFASELKSKIRCRCLALDLRGHGETKVENE-DD---------LSLET 128 (343)
T ss_pred eEEEEEecCC--CCCccEEEEeecCcccchhHHHHHHHHHhhcceeEEEeeccccCccccCCh-hh---------cCHHH
Confidence 4788888543 344556666668888888899999988775 6888999999 998762221 11 22233
Q ss_pred ccchHHHHHHHHHhcCCCeEEEEEecccHHHHHHhhcCC---CccEEEEec
Q 025842 107 GYVDAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLASSH---DIQAAVVLH 154 (247)
Q Consensus 107 ~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~---~i~~~v~~~ 154 (247)
...|+-++++++......+|+++||||||.+|...|... .+.+++.+.
T Consensus 129 ~~KD~~~~i~~~fge~~~~iilVGHSmGGaIav~~a~~k~lpsl~Gl~viD 179 (343)
T KOG2564|consen 129 MSKDFGAVIKELFGELPPQIILVGHSMGGAIAVHTAASKTLPSLAGLVVID 179 (343)
T ss_pred HHHHHHHHHHHHhccCCCceEEEeccccchhhhhhhhhhhchhhhceEEEE
Confidence 448888999988877678999999999999998877443 666666554
No 97
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.55 E-value=5.3e-13 Score=113.51 Aligned_cols=175 Identities=14% Similarity=0.152 Sum_probs=124.2
Q ss_pred ceEEeecCceEEEeecCCC-CCCeEEEEEcCccCC----CcchHHHHHHHHHhcCcEEEEeccCCCCCccCCCCcccchH
Q 025842 22 GTVQQLGGLNTYVTGSGPP-DSKSAILLISDVFGY----EAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDRE 96 (247)
Q Consensus 22 ~~~~~~~~~~~~~~~p~~~-~~~~~vv~~hgg~g~----~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~ 96 (247)
..+.+.+.+.++-+.|..+ ..+.|||+++..... +-.--+.++++|.++||.|+++|.+ .+. .......+.
T Consensus 193 ~VV~~n~l~eLiqY~P~te~v~~~PLLIVPp~INK~YIlDL~P~~SlVr~lv~qG~~VflIsW~--nP~--~~~r~~~ld 268 (560)
T TIGR01839 193 AVVFRNEVLELIQYKPITEQQHARPLLVVPPQINKFYIFDLSPEKSFVQYCLKNQLQVFIISWR--NPD--KAHREWGLS 268 (560)
T ss_pred ceeEECCceEEEEeCCCCCCcCCCcEEEechhhhhhheeecCCcchHHHHHHHcCCeEEEEeCC--CCC--hhhcCCCHH
Confidence 3444666788888866443 346788888865531 1011157899999999999999995 221 111222223
Q ss_pred HHHhhcCCccccchHHHHHHHHHhc-CCCeEEEEEecccHHHHHH----hh-cCC--CccEEEEecCCC-----------
Q 025842 97 AWRKIHNTDKGYVDAKSVIAALKSK-GVSAIGAAGFCWGGVVAAK----LA-SSH--DIQAAVVLHPGA----------- 157 (247)
Q Consensus 97 ~~~~~~~~~~~~~d~~~~i~~l~~~-~~~~i~l~G~S~Gg~~a~~----~a-~~~--~i~~~v~~~~~~----------- 157 (247)
++ ++.+.++++.+++. +.++|.++|+|+||.++.. ++ ..+ +|+.++++....
T Consensus 269 DY---------v~~i~~Ald~V~~~tG~~~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf~~~g~l~~f 339 (560)
T TIGR01839 269 TY---------VDALKEAVDAVRAITGSRDLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDSTMESPAALF 339 (560)
T ss_pred HH---------HHHHHHHHHHHHHhcCCCCeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecccccCCCCcchhc
Confidence 33 35788899999887 6789999999999999886 34 333 588888655432
Q ss_pred --------------------------------------------------------------------------------
Q 025842 158 -------------------------------------------------------------------------------- 157 (247)
Q Consensus 158 -------------------------------------------------------------------------------- 157 (247)
T Consensus 340 ~~e~~~~~~e~~~~~~G~lpg~~ma~~F~~LrP~dliw~y~v~~yllg~~p~~fdll~Wn~D~t~lPg~~~~e~l~ly~~ 419 (560)
T TIGR01839 340 ADEQTLEAAKRRSYQAGVLDGSEMAKVFAWMRPNDLIWNYWVNNYLLGNEPPAFDILYWNNDTTRLPAAFHGDLLDMFKS 419 (560)
T ss_pred cChHHHHHHHHHHHhcCCcCHHHHHHHHHhcCchhhhHHHHHHHhhcCCCcchhhHHHHhCcCccchHHHHHHHHHHHhc
Confidence
Q ss_pred ------------CCccccccccccEEEeecCCCCCCCHHHHHHHHHHHHhccCCCeeEEEeCCCCcccc
Q 025842 158 ------------ITVDDINEIKVPVAILGAEIDHVSPPEDLKRFGEILSAKLKNDCLVKIYPRVSHGWT 214 (247)
Q Consensus 158 ------------~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~H~~~ 214 (247)
...-++++|++|+|++.|.+|.++|.+.+..+.+.++. ++++++.++ ||.-.
T Consensus 420 N~L~~pG~l~v~G~~idL~~I~~Pvl~va~~~DHIvPw~s~~~~~~l~gs----~~~fvl~~g-GHIgg 483 (560)
T TIGR01839 420 NPLTRPDALEVCGTPIDLKKVKCDSFSVAGTNDHITPWDAVYRSALLLGG----KRRFVLSNS-GHIQS 483 (560)
T ss_pred CCCCCCCCEEECCEEechhcCCCCeEEEecCcCCcCCHHHHHHHHHHcCC----CeEEEecCC-Ccccc
Confidence 00225788999999999999999999999999998732 688888885 89543
No 98
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.53 E-value=1.1e-13 Score=115.17 Aligned_cols=66 Identities=18% Similarity=0.182 Sum_probs=53.9
Q ss_pred cccccEEEeecCCCCCCCHHHHHHHHHHHHhccCCCeeEEEeCC-CCccccccCCCCChHHHHHHHHHHHHHHHHHHH
Q 025842 165 EIKVPVAILGAEIDHVSPPEDLKRFGEILSAKLKNDCLVKIYPR-VSHGWTVRYNVEDEFAVKSAEEAHEDMINWLTK 241 (247)
Q Consensus 165 ~~~~P~l~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~ 241 (247)
++++|+|+|+|++|.++|.+..+.+.+.++ ..+.+++++++++ .||..... ..+++.+.+.+||++
T Consensus 321 ~I~~PtLvI~G~~D~l~p~~~~~~la~~lp-~~~~~a~l~~I~s~~GH~~~le----------~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 321 NIEANVLMIPCKQDLLQPPRYNYKMVDILQ-KQGKYAEVYEIESINGHMAGVF----------DIHLFEKKIYEFLNR 387 (389)
T ss_pred cCCCCEEEEEeCCCCCCCHHHHHHHHHHhh-hcCCCeEEEEECCCCCcchhhc----------CHHHHHHHHHHHHcc
Confidence 578999999999999999999999999884 2233688999985 89986552 467888889999875
No 99
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.52 E-value=3.2e-13 Score=107.94 Aligned_cols=167 Identities=22% Similarity=0.223 Sum_probs=109.6
Q ss_pred ceEEEeec--CCCCCCeEEEEEcCccCCCcchHHHHH----------HHHHhcCcEEEEeccC-CCCCccCCCCcccchH
Q 025842 30 LNTYVTGS--GPPDSKSAILLISDVFGYEAPLFRKLA----------DKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDRE 96 (247)
Q Consensus 30 ~~~~~~~p--~~~~~~~~vv~~hgg~g~~~~~~~~~a----------~~la~~G~~v~~~d~~-~g~~~~~~~~~~~~~~ 96 (247)
+.+-+++| ...++.|+||..+ .++.......... ..|+++||.|+++|.| .|.|.+.....
T Consensus 5 L~adv~~P~~~~~~~~P~il~~t-pY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~~----- 78 (272)
T PF02129_consen 5 LAADVYRPGADGGGPFPVILTRT-PYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDPM----- 78 (272)
T ss_dssp EEEEEEEE--TTSSSEEEEEEEE-SSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-TT-----
T ss_pred EEEEEEecCCCCCCcccEEEEcc-CcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCccccC-----
Confidence 45566777 5555667666666 6664321111111 1389999999999998 55544111110
Q ss_pred HHHhhcCCccccchHHHHHHHHHhcC--CCeEEEEEecccHHHHHHhhc-CC-CccEEEEecCCCC--------------
Q 025842 97 AWRKIHNTDKGYVDAKSVIAALKSKG--VSAIGAAGFCWGGVVAAKLAS-SH-DIQAAVVLHPGAI-------------- 158 (247)
Q Consensus 97 ~~~~~~~~~~~~~d~~~~i~~l~~~~--~~~i~l~G~S~Gg~~a~~~a~-~~-~i~~~v~~~~~~~-------------- 158 (247)
.....+|..++|+|+.++. ..+|+++|.|.+|..++.+|. .+ .+++++...+...
T Consensus 79 -------~~~e~~D~~d~I~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d~~~~~~~~gG~~~~ 151 (272)
T PF02129_consen 79 -------SPNEAQDGYDTIEWIAAQPWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSDLYRDSIYPGGAFRL 151 (272)
T ss_dssp -------SHHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SBTCCTSSEETTEEBC
T ss_pred -------ChhHHHHHHHHHHHHHhCCCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCcccccchhcCCcccc
Confidence 2223489999999999984 359999999999999999885 44 9999998765540
Q ss_pred --------------------------------------------------------------------CccccccccccE
Q 025842 159 --------------------------------------------------------------------TVDDINEIKVPV 170 (247)
Q Consensus 159 --------------------------------------------------------------------~~~~~~~~~~P~ 170 (247)
....+.++++|+
T Consensus 152 ~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~i~vP~ 231 (272)
T PF02129_consen 152 GFFAGWEDLQSQQEDPQSRPAPDRDYLRERARYEALGDSPLGRLPRDPPYWDEWLDHPPYDPFWQERSPSERLDKIDVPV 231 (272)
T ss_dssp CHHHHHHHHHHHHHHHTCCCCSSSHHHHHHHHHHCHHHHHHHHCHGGTHHHHHHHHT-SSSHHHHTTBHHHHHGG--SEE
T ss_pred cchhHHHHHHHHhhcccCCCchhhhhhhhhhhhhhhhhHHHhhhccccHHHHHHHhCCCcCHHHHhCChHHHHhhCCCCE
Confidence 011357889999
Q ss_pred EEeecCCCCCCCHHHHHHHHHHHHhccC-CCeeEEEeCCCCcc
Q 025842 171 AILGAEIDHVSPPEDLKRFGEILSAKLK-NDCLVKIYPRVSHG 212 (247)
Q Consensus 171 l~i~g~~D~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~H~ 212 (247)
|++.|-.|..+. ..+.+.++.+ ++.+ ++.++++-|. .|+
T Consensus 232 l~v~Gw~D~~~~-~~~~~~~~~l-~~~~~~~~~Liigpw-~H~ 271 (272)
T PF02129_consen 232 LIVGGWYDTLFL-RGALRAYEAL-RAPGSKPQRLIIGPW-THG 271 (272)
T ss_dssp EEEEETTCSSTS-HHHHHHHHHH-CTTSTC-EEEEEESE-STT
T ss_pred EEecccCCcccc-hHHHHHHHHh-hcCCCCCCEEEEeCC-CCC
Confidence 999999997777 6777777888 4454 4568888775 775
No 100
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=99.52 E-value=1.1e-12 Score=98.93 Aligned_cols=178 Identities=18% Similarity=0.260 Sum_probs=108.6
Q ss_pred eEEeecC---ceEEEeecCCCCC--CeEEEEEcCccCCCcchHHHHHHHHHhcCcEEEEeccC-C-CCCccCCCCcccch
Q 025842 23 TVQQLGG---LNTYVTGSGPPDS--KSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-Y-GDPIVDLNNPQFDR 95 (247)
Q Consensus 23 ~~~~~~~---~~~~~~~p~~~~~--~~~vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~~-~-g~~~~~~~~~~~~~ 95 (247)
++...++ +..|-..|..+.+ .+.||+-+ |++..-..+..+|.+|+..||.|+.+|.. | |.|. ..-
T Consensus 5 hvi~~~~~~~I~vwet~P~~~~~~~~~tiliA~-Gf~rrmdh~agLA~YL~~NGFhViRyDsl~HvGlSs--G~I----- 76 (294)
T PF02273_consen 5 HVIRLEDGRQIRVWETRPKNNEPKRNNTILIAP-GFARRMDHFAGLAEYLSANGFHVIRYDSLNHVGLSS--GDI----- 76 (294)
T ss_dssp EEEEETTTEEEEEEEE---TTS---S-EEEEE--TT-GGGGGGHHHHHHHHTTT--EEEE---B----------------
T ss_pred ceeEcCCCCEEEEeccCCCCCCcccCCeEEEec-chhHHHHHHHHHHHHHhhCCeEEEeccccccccCCC--CCh-----
Confidence 4444433 5666666654433 35566666 88877778899999999999999999987 3 5543 111
Q ss_pred HHHHhhcCCccccchHHHHHHHHHhcCCCeEEEEEecccHHHHHHhhcCCCccEEEEecCCC------------------
Q 025842 96 EAWRKIHNTDKGYVDAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLASSHDIQAAVVLHPGA------------------ 157 (247)
Q Consensus 96 ~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~~i~~~v~~~~~~------------------ 157 (247)
...+.+....++..+++|+++.+..+++++.-|+-|.+|+..|.+.++..+|..-+..
T Consensus 77 ----~eftms~g~~sL~~V~dwl~~~g~~~~GLIAaSLSaRIAy~Va~~i~lsfLitaVGVVnlr~TLe~al~~Dyl~~~ 152 (294)
T PF02273_consen 77 ----NEFTMSIGKASLLTVIDWLATRGIRRIGLIAASLSARIAYEVAADINLSFLITAVGVVNLRDTLEKALGYDYLQLP 152 (294)
T ss_dssp --------HHHHHHHHHHHHHHHHHTT---EEEEEETTHHHHHHHHTTTS--SEEEEES--S-HHHHHHHHHSS-GGGS-
T ss_pred ----hhcchHHhHHHHHHHHHHHHhcCCCcchhhhhhhhHHHHHHHhhccCcceEEEEeeeeeHHHHHHHHhccchhhcc
Confidence 1222233348899999999999999999999999999999999877666666655554
Q ss_pred ---------------------------------CCccccccccccEEEeecCCCCCCCHHHHHHHHHHHHhccCCCeeEE
Q 025842 158 ---------------------------------ITVDDINEIKVPVAILGAEIDHVSPPEDLKRFGEILSAKLKNDCLVK 204 (247)
Q Consensus 158 ---------------------------------~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~ 204 (247)
.+..+++++.+|++.+++.+|..|......++.+.+... .++++
T Consensus 153 i~~lp~dldfeGh~l~~~vFv~dc~e~~w~~l~ST~~~~k~l~iP~iaF~A~~D~WV~q~eV~~~~~~~~s~---~~kly 229 (294)
T PF02273_consen 153 IEQLPEDLDFEGHNLGAEVFVTDCFEHGWDDLDSTINDMKRLSIPFIAFTANDDDWVKQSEVEELLDNINSN---KCKLY 229 (294)
T ss_dssp GGG--SEEEETTEEEEHHHHHHHHHHTT-SSHHHHHHHHTT--S-EEEEEETT-TTS-HHHHHHHHTT-TT-----EEEE
T ss_pred hhhCCCcccccccccchHHHHHHHHHcCCccchhHHHHHhhCCCCEEEEEeCCCccccHHHHHHHHHhcCCC---ceeEE
Confidence 113357788999999999999999999999988887432 78899
Q ss_pred EeCCCCccccc
Q 025842 205 IYPRVSHGWTV 215 (247)
Q Consensus 205 ~~~~~~H~~~~ 215 (247)
.++|+.|.+..
T Consensus 230 sl~Gs~HdL~e 240 (294)
T PF02273_consen 230 SLPGSSHDLGE 240 (294)
T ss_dssp EETT-SS-TTS
T ss_pred EecCccchhhh
Confidence 99999998765
No 101
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.50 E-value=1.4e-13 Score=108.41 Aligned_cols=198 Identities=18% Similarity=0.206 Sum_probs=86.9
Q ss_pred ceEEeecC-ceEEEeecCCCCCCeEEEEEcCccCC---CcchHHHHHHHHHhcCcEEEEeccCC-CCCccCCCCcccchH
Q 025842 22 GTVQQLGG-LNTYVTGSGPPDSKSAILLISDVFGY---EAPLFRKLADKVAGAGFLVVAPDFFY-GDPIVDLNNPQFDRE 96 (247)
Q Consensus 22 ~~~~~~~~-~~~~~~~p~~~~~~~~vv~~hgg~g~---~~~~~~~~a~~la~~G~~v~~~d~~~-g~~~~~~~~~~~~~~ 96 (247)
|.+..+.. ..+|-+.+........|||+. |.+. +......+++.|...||.++.+.++. -.++
T Consensus 11 G~lh~Y~~~~~afe~~~~~~~~~~~llfIG-GLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~----------- 78 (303)
T PF08538_consen 11 GILHHYTPKLVAFEFTSSSSSAPNALLFIG-GLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGW----------- 78 (303)
T ss_dssp EEEEEECCTTEEEEEEEE-TTSSSEEEEE---TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-----------
T ss_pred eEEEEECCCCeEEEecCCCCCCCcEEEEEC-CCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCc-----------
Confidence 55666654 555555433333445666666 5542 34556789999977899999999951 1111
Q ss_pred HHHhhcCCccccchHHHHHHHHHhc-----CCCeEEEEEecccHHHHHHhhcC-------CCccEEEEecCCCCC-----
Q 025842 97 AWRKIHNTDKGYVDAKSVIAALKSK-----GVSAIGAAGFCWGGVVAAKLASS-------HDIQAAVVLHPGAIT----- 159 (247)
Q Consensus 97 ~~~~~~~~~~~~~d~~~~i~~l~~~-----~~~~i~l~G~S~Gg~~a~~~a~~-------~~i~~~v~~~~~~~~----- 159 (247)
...+.++.++|+.++|+||+.. +.++|+|+|||.|.+-++.+... +.|+++|+..|..+.
T Consensus 79 ---G~~SL~~D~~eI~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa~~~ 155 (303)
T PF08538_consen 79 ---GTSSLDRDVEEIAQLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREAILN 155 (303)
T ss_dssp ----S--HHHHHHHHHHHHHHHHHHS------S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTSTTT
T ss_pred ---CcchhhhHHHHHHHHHHHHHHhhccccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhHhhh
Confidence 1223344568999999999987 46799999999999999997622 379999999887611
Q ss_pred ---------------------------------------------------------------------ccccccccccE
Q 025842 160 ---------------------------------------------------------------------VDDINEIKVPV 170 (247)
Q Consensus 160 ---------------------------------------------------------------------~~~~~~~~~P~ 170 (247)
...+..+..|+
T Consensus 156 ~~~~~~~~~~~v~~A~~~i~~g~~~~~lp~~~~~~~~~~~PiTA~Rf~SL~s~~gdDD~FSSDL~de~l~~tfG~v~~pl 235 (303)
T PF08538_consen 156 FLGEREAYEELVALAKELIAEGKGDEILPREFTPLVFYDTPITAYRFLSLASPGGDDDYFSSDLSDERLKKTFGKVSKPL 235 (303)
T ss_dssp SHHH---HHHHHHHHHHHHHCT-TT-GG----GGTTT-SS---HHHHHT-S-SSHHHHTHHHHHTT-HHHHTGGG--S-E
T ss_pred cccchHHHHHHHHHHHHHHHcCCCCceeeccccccccCCCcccHHHHHhccCCCCcccccCCCCCHHHHHHHhccCCCce
Confidence 12466788899
Q ss_pred EEeecCCCCCCCHHHH-HHHHHHHHhccC---CCeeEEEeCCCCccccccCCCCChHHHHHHHHHHHHHHHHHH
Q 025842 171 AILGAEIDHVSPPEDL-KRFGEILSAKLK---NDCLVKIYPRVSHGWTVRYNVEDEFAVKSAEEAHEDMINWLT 240 (247)
Q Consensus 171 l~i~g~~D~~~~~~~~-~~~~~~l~~~~~---~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~ 240 (247)
|++.+.+|..||...- +++.+++....+ ....-.++||+.|.+...... .+.+.+.+++..||+
T Consensus 236 Lvl~Sg~DEyvP~~vdk~~Ll~rw~~a~~~~~~s~~S~iI~GA~H~~~~~~~~------~~~~~l~~rV~~fl~ 303 (303)
T PF08538_consen 236 LVLYSGKDEYVPPWVDKEALLERWKAATNPKIWSPLSGIIPGASHNVSGPSQA------EAREWLVERVVKFLK 303 (303)
T ss_dssp EEEEE--TT-----------------------------------------------------------------
T ss_pred EEEecCCCceecccccccccccccccccccccccccccccccccccccccccc------cccccccccccccCC
Confidence 9999999999986443 456666633222 123355899999998654322 235577888888874
No 102
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=99.48 E-value=1.9e-12 Score=100.72 Aligned_cols=199 Identities=18% Similarity=0.234 Sum_probs=129.1
Q ss_pred CCCCeEEEEEcCccCCCcchHHHHHHHHHhcCcEEEEeccC-CCCCccC--CC--CcccchHHHHhhcCC----------
Q 025842 40 PDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVD--LN--NPQFDREAWRKIHNT---------- 104 (247)
Q Consensus 40 ~~~~~~vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~~-~g~~~~~--~~--~~~~~~~~~~~~~~~---------- 104 (247)
.++.|.|||.| |.|.+-..|..++-.||++||.|.++++| +...+.. .. ..+.-...|+.-...
T Consensus 115 ~~k~PvvvFSH-GLggsRt~YSa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~ir 193 (399)
T KOG3847|consen 115 NDKYPVVVFSH-GLGGSRTLYSAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFHIR 193 (399)
T ss_pred CCCccEEEEec-ccccchhhHHHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEEee
Confidence 34567777777 66655678888999999999999999998 4432200 00 011111223221111
Q ss_pred ----ccccchHHHHHHHHHhc------------------------CCCeEEEEEecccHHHHHHhhcCC-CccEEEEecC
Q 025842 105 ----DKGYVDAKSVIAALKSK------------------------GVSAIGAAGFCWGGVVAAKLASSH-DIQAAVVLHP 155 (247)
Q Consensus 105 ----~~~~~d~~~~i~~l~~~------------------------~~~~i~l~G~S~Gg~~a~~~a~~~-~i~~~v~~~~ 155 (247)
-........+++.|++. +..+++++|||+||..++.....+ ++++.|++.+
T Consensus 194 Neqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~t~FrcaI~lD~ 273 (399)
T KOG3847|consen 194 NEQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSHTDFRCAIALDA 273 (399)
T ss_pred CHHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhccccceeeeeeeee
Confidence 11112333444444442 124889999999999999866555 9999999999
Q ss_pred CCCCcc--ccccccccEEEeecCCCCCCCHHHHHHHHHHHHhccCCCeeEEEeCCCCccccccCCCC-------------
Q 025842 156 GAITVD--DINEIKVPVAILGAEIDHVSPPEDLKRFGEILSAKLKNDCLVKIYPRVSHGWTVRYNVE------------- 220 (247)
Q Consensus 156 ~~~~~~--~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~H~~~~~~~~~------------- 220 (247)
+..+.+ ...+.+.|+|+|.- |.+--.++...+.+..+ ++....+..+.|+=|.-..+.+..
T Consensus 274 WM~Pl~~~~~~~arqP~~finv--~~fQ~~en~~vmKki~~--~n~g~~~it~~GsVHqnfsDfpfv~p~~i~k~f~~kg 349 (399)
T KOG3847|consen 274 WMFPLDQLQYSQARQPTLFINV--EDFQWNENLLVMKKIES--QNEGNHVITLDGSVHQNFSDFPFVTPNWIGKVFKVKG 349 (399)
T ss_pred eecccchhhhhhccCCeEEEEc--ccccchhHHHHHHhhhC--CCccceEEEEccceecccccCccccHHHHHHHhccCC
Confidence 876544 46778899999994 33333455555555553 444668889999988765543322
Q ss_pred --ChHHHHHHHHHHHHHHHHHHHHhcc
Q 025842 221 --DEFAVKSAEEAHEDMINWLTKYVKR 245 (247)
Q Consensus 221 --~~~~~~~~~~~~~~~~~fl~~~~~~ 245 (247)
+|. ++.+...+..++||++++..
T Consensus 350 ~~dpy--~~~~~~~r~slaFLq~h~d~ 374 (399)
T KOG3847|consen 350 ETDPY--EAMQIAIRASLAFLQKHLDL 374 (399)
T ss_pred CCChH--HHHHHHHHHHHHHHHhhhhh
Confidence 233 67888999999999998754
No 103
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.47 E-value=4.5e-12 Score=94.69 Aligned_cols=148 Identities=20% Similarity=0.187 Sum_probs=97.8
Q ss_pred EEEEcCccCCCcchH--HHHHHHHHhcC--cEEEEeccCCCCCccCCCCcccchHHHHhhcCCccccchHHHHHHHHHhc
Q 025842 46 ILLISDVFGYEAPLF--RKLADKVAGAG--FLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSK 121 (247)
Q Consensus 46 vv~~hgg~g~~~~~~--~~~a~~la~~G--~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~ 121 (247)
||++| |+.++.... ..+.+.+++.+ ..+..++++ ..+. .-+..+.+.+.+.
T Consensus 2 ilYlH-GF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~-~~p~-----------------------~a~~~l~~~i~~~ 56 (187)
T PF05728_consen 2 ILYLH-GFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLP-PFPE-----------------------EAIAQLEQLIEEL 56 (187)
T ss_pred eEEec-CCCCCCCCHHHHHHHHHHHHhCCCceEECCCCC-cCHH-----------------------HHHHHHHHHHHhC
Confidence 78899 555443333 45667777765 456666662 1111 2233344455555
Q ss_pred CCCeEEEEEecccHHHHHHhhcCCCccEEEEecCCCCC-----------------------------ccc--c--ccccc
Q 025842 122 GVSAIGAAGFCWGGVVAAKLASSHDIQAAVVLHPGAIT-----------------------------VDD--I--NEIKV 168 (247)
Q Consensus 122 ~~~~i~l~G~S~Gg~~a~~~a~~~~i~~~v~~~~~~~~-----------------------------~~~--~--~~~~~ 168 (247)
..+.+.++|.|+||..|..+|....+++ |+++|.... ... . .....
T Consensus 57 ~~~~~~liGSSlGG~~A~~La~~~~~~a-vLiNPav~p~~~l~~~iG~~~~~~~~e~~~~~~~~~~~l~~l~~~~~~~~~ 135 (187)
T PF05728_consen 57 KPENVVLIGSSLGGFYATYLAERYGLPA-VLINPAVRPYELLQDYIGEQTNPYTGESYELTEEHIEELKALEVPYPTNPE 135 (187)
T ss_pred CCCCeEEEEEChHHHHHHHHHHHhCCCE-EEEcCCCCHHHHHHHhhCccccCCCCccceechHhhhhcceEeccccCCCc
Confidence 5556999999999999999998888887 888888721 001 1 12235
Q ss_pred cEEEeecCCCCCCCHHHHHHHHHHHHhccCCCeeEEEeCCCCccccccCCCCChHHHHHHHHHHHHHHHHH
Q 025842 169 PVAILGAEIDHVSPPEDLKRFGEILSAKLKNDCLVKIYPRVSHGWTVRYNVEDEFAVKSAEEAHEDMINWL 239 (247)
Q Consensus 169 P~l~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl 239 (247)
++++++++.|.+++...+...++ .+...+.+|++|.|.. .++....|++|+
T Consensus 136 ~~lvll~~~DEvLd~~~a~~~~~--------~~~~~i~~ggdH~f~~------------f~~~l~~i~~f~ 186 (187)
T PF05728_consen 136 RYLVLLQTGDEVLDYREAVAKYR--------GCAQIIEEGGDHSFQD------------FEEYLPQIIAFL 186 (187)
T ss_pred cEEEEEecCCcccCHHHHHHHhc--------CceEEEEeCCCCCCcc------------HHHHHHHHHHhh
Confidence 89999999999999855544443 2334456777999865 478888999887
No 104
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.47 E-value=2.8e-12 Score=94.73 Aligned_cols=137 Identities=15% Similarity=0.167 Sum_probs=90.5
Q ss_pred EEEEcCccCCCcchHH-HHHHHHHhcCcEEEEeccCCCCCccCCCCcccchHHHHhhcCCccccchHHHHHHHHHhc---
Q 025842 46 ILLISDVFGYEAPLFR-KLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSK--- 121 (247)
Q Consensus 46 vv~~hgg~g~~~~~~~-~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~--- 121 (247)
|+++||..+....+|. .+.+.|.+. +.|-.+++. . .+..+.++.+++.
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~-~~V~~~~~~--~-------------------------P~~~~W~~~l~~~i~~ 52 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENS-VRVEQPDWD--N-------------------------PDLDEWVQALDQAIDA 52 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTS-EEEEEC--T--S---------------------------HHHHHHHHHHCCHC
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCC-eEEeccccC--C-------------------------CCHHHHHHHHHHHHhh
Confidence 6788866665445554 577777666 777776661 1 1223333444433
Q ss_pred CCCeEEEEEecccHHHHHHhh-cCC--CccEEEEecCCCCC-c------------cccccccccEEEeecCCCCCCCHHH
Q 025842 122 GVSAIGAAGFCWGGVVAAKLA-SSH--DIQAAVVLHPGAIT-V------------DDINEIKVPVAILGAEIDHVSPPED 185 (247)
Q Consensus 122 ~~~~i~l~G~S~Gg~~a~~~a-~~~--~i~~~v~~~~~~~~-~------------~~~~~~~~P~l~i~g~~D~~~~~~~ 185 (247)
-.++++++|||+|..+++.++ ... +|+++++++|.... . ........|.+++.+++|+.+|.+.
T Consensus 53 ~~~~~ilVaHSLGc~~~l~~l~~~~~~~v~g~lLVAp~~~~~~~~~~~~~~~f~~~p~~~l~~~~~viaS~nDp~vp~~~ 132 (171)
T PF06821_consen 53 IDEPTILVAHSLGCLTALRWLAEQSQKKVAGALLVAPFDPDDPEPFPPELDGFTPLPRDPLPFPSIVIASDNDPYVPFER 132 (171)
T ss_dssp -TTTEEEEEETHHHHHHHHHHHHTCCSSEEEEEEES--SCGCHHCCTCGGCCCTTSHCCHHHCCEEEEEETTBSSS-HHH
T ss_pred cCCCeEEEEeCHHHHHHHHHHhhcccccccEEEEEcCCCcccccchhhhccccccCcccccCCCeEEEEcCCCCccCHHH
Confidence 235699999999999999987 433 99999999987642 0 0122345678999999999999999
Q ss_pred HHHHHHHHHhccCCCeeEEEeCCCCcccccc
Q 025842 186 LKRFGEILSAKLKNDCLVKIYPRVSHGWTVR 216 (247)
Q Consensus 186 ~~~~~~~l~~~~~~~~~~~~~~~~~H~~~~~ 216 (247)
++.+.+.+ +++++.++++||.....
T Consensus 133 a~~~A~~l------~a~~~~~~~~GHf~~~~ 157 (171)
T PF06821_consen 133 AQRLAQRL------GAELIILGGGGHFNAAS 157 (171)
T ss_dssp HHHHHHHH------T-EEEEETS-TTSSGGG
T ss_pred HHHHHHHc------CCCeEECCCCCCccccc
Confidence 99999999 67899999999965443
No 105
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=99.46 E-value=1.9e-12 Score=98.98 Aligned_cols=154 Identities=14% Similarity=0.118 Sum_probs=95.3
Q ss_pred EEeecCC--CCCCeEEEEEcCccCCCcchHHHH--HHHHHh-cCcEEEEeccCCCCCccCCCCcccchHHHHhhcC--Cc
Q 025842 33 YVTGSGP--PDSKSAILLISDVFGYEAPLFRKL--ADKVAG-AGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHN--TD 105 (247)
Q Consensus 33 ~~~~p~~--~~~~~~vv~~hgg~g~~~~~~~~~--a~~la~-~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~--~~ 105 (247)
.++.|+. .++.|.||+|||..+ +...+... ...||+ +||.|+.|+.. .... .....+|..... -.
T Consensus 4 ~lYvP~~~~~~~~PLVv~LHG~~~-~a~~~~~~s~~~~lAd~~GfivvyP~~~-~~~~------~~~cw~w~~~~~~~g~ 75 (220)
T PF10503_consen 4 RLYVPPGAPRGPVPLVVVLHGCGQ-SAEDFAAGSGWNALADREGFIVVYPEQS-RRAN------PQGCWNWFSDDQQRGG 75 (220)
T ss_pred EEecCCCCCCCCCCEEEEeCCCCC-CHHHHHhhcCHHHHhhcCCeEEEccccc-ccCC------CCCcccccccccccCc
Confidence 3444443 234678888885544 33333221 134655 59999999963 1110 112223432111 11
Q ss_pred cccchHHHHHHHHHhc---CCCeEEEEEecccHHHHHHhhcC-C-CccEEEEecCCCCC-----------------c---
Q 025842 106 KGYVDAKSVIAALKSK---GVSAIGAAGFCWGGVVAAKLASS-H-DIQAAVVLHPGAIT-----------------V--- 160 (247)
Q Consensus 106 ~~~~d~~~~i~~l~~~---~~~~i~l~G~S~Gg~~a~~~a~~-~-~i~~~v~~~~~~~~-----------------~--- 160 (247)
.....+.++++++... |.+||++.|+|.||+++..++.. + .|.++..+++.... .
T Consensus 76 ~d~~~i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~~~~a~~~~~a~~~m~~g~~~~p~ 155 (220)
T PF10503_consen 76 GDVAFIAALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVPYGCAASGASALSAMRSGPRPAPA 155 (220)
T ss_pred cchhhHHHHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHhCCccceEEEeecccccccccCcccHHHHhhCCCCCChH
Confidence 2234566777777764 78899999999999999998854 4 77777777665410 0
Q ss_pred ------ccc-ccccccEEEeecCCCCCCCHHHHHHHHHHHH
Q 025842 161 ------DDI-NEIKVPVAILGAEIDHVSPPEDLKRFGEILS 194 (247)
Q Consensus 161 ------~~~-~~~~~P~l~i~g~~D~~~~~~~~~~~~~~l~ 194 (247)
... .....|++++||+.|.+|.+.+.+++.+.+.
T Consensus 156 ~~~~a~~~~g~~~~~P~~v~hG~~D~tV~~~n~~~~~~q~~ 196 (220)
T PF10503_consen 156 AAWGARSDAGAYPGYPRIVFHGTADTTVNPQNADQLVAQWL 196 (220)
T ss_pred HHHHhhhhccCCCCCCEEEEecCCCCccCcchHHHHHHHHH
Confidence 000 0113599999999999999999999888873
No 106
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.45 E-value=5.5e-13 Score=103.36 Aligned_cols=128 Identities=23% Similarity=0.323 Sum_probs=93.5
Q ss_pred cEEEEeccC-CCCCccCCCCcccchHHHHhhcCCccccchHHHHHHHHHhc-CCCeEEEEEecccHHHHHHhhcCC--Cc
Q 025842 72 FLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSK-GVSAIGAAGFCWGGVVAAKLASSH--DI 147 (247)
Q Consensus 72 ~~v~~~d~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~-~~~~i~l~G~S~Gg~~a~~~a~~~--~i 147 (247)
|.|+++|.| .|.+. +. .... ...-...|+.+.++.+.+. +.+++.++||||||.+++.++..+ +|
T Consensus 1 f~vi~~d~rG~g~S~--~~-~~~~--------~~~~~~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p~~v 69 (230)
T PF00561_consen 1 FDVILFDLRGFGYSS--PH-WDPD--------FPDYTTDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYPERV 69 (230)
T ss_dssp EEEEEEECTTSTTSS--SC-CGSG--------SCTHCHHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSGGGE
T ss_pred CEEEEEeCCCCCCCC--CC-ccCC--------cccccHHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCchhh
Confidence 789999997 56554 21 0000 0011124444555555443 777899999999999999988554 89
Q ss_pred cEEEEecCC---------------C-------------------------------------------------------
Q 025842 148 QAAVVLHPG---------------A------------------------------------------------------- 157 (247)
Q Consensus 148 ~~~v~~~~~---------------~------------------------------------------------------- 157 (247)
+++|++++. .
T Consensus 70 ~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (230)
T PF00561_consen 70 KKLVLISPPPDLPDGLWNRIWPRGNLQGQLLDNFFNFLSDPIKPLLGRWPKQFFAYDREFVEDFLKQFQSQQYARFAETD 149 (230)
T ss_dssp EEEEEESESSHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCHHH
T ss_pred cCcEEEeeeccchhhhhHHHHhhhhhhhhHHHhhhccccccchhhhhhhhhheeeccCccccchhhccchhhhhHHHHHH
Confidence 999999985 1
Q ss_pred ----------------CCccccccccccEEEeecCCCCCCCHHHHHHHHHHHHhccCCCeeEEEeCCCCccccc
Q 025842 158 ----------------ITVDDINEIKVPVAILGAEIDHVSPPEDLKRFGEILSAKLKNDCLVKIYPRVSHGWTV 215 (247)
Q Consensus 158 ----------------~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~H~~~~ 215 (247)
.....+.++++|+++++|++|+++|.+....+.+.++ ..++++++++||....
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~~-----~~~~~~~~~~GH~~~~ 218 (230)
T PF00561_consen 150 AFDNMFWNALGYFSVWDPSPALSNIKVPTLIIWGEDDPLVPPESSEQLAKLIP-----NSQLVLIEGSGHFAFL 218 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHHHHHHHHHST-----TEEEEEETTCCSTHHH
T ss_pred HHhhhccccccccccccccccccccCCCeEEEEeCCCCCCCHHHHHHHHHhcC-----CCEEEECCCCChHHHh
Confidence 0022456789999999999999999999999888774 6889999999998655
No 107
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.42 E-value=1.8e-11 Score=93.40 Aligned_cols=195 Identities=19% Similarity=0.263 Sum_probs=125.8
Q ss_pred ceEEEeecCCCCCCeEEEEEcCccCCCcchHHHHHHHHHhcCcEEEEeccCCCCCccCCCCcccchHHHHhhcCCccccc
Q 025842 30 LNTYVTGSGPPDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYV 109 (247)
Q Consensus 30 ~~~~~~~p~~~~~~~~vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (247)
.++.++.|..++..|.|+|+||..-. ...|.++..++++.||.|++|+.. .... ++.. +.++
T Consensus 33 kpLlI~tP~~~G~yPVilF~HG~~l~-ns~Ys~lL~HIASHGfIVVAPQl~-~~~~--p~~~--------------~Ei~ 94 (307)
T PF07224_consen 33 KPLLIVTPSEAGTYPVILFLHGFNLY-NSFYSQLLAHIASHGFIVVAPQLY-TLFP--PDGQ--------------DEIK 94 (307)
T ss_pred CCeEEecCCcCCCccEEEEeechhhh-hHHHHHHHHHHhhcCeEEEechhh-cccC--CCch--------------HHHH
Confidence 44667766777788888888855444 468889999999999999999994 2211 2111 1125
Q ss_pred hHHHHHHHHHhc-----------CCCeEEEEEecccHHHHHHhhcCC----CccEEEEecCCCCCcc-------------
Q 025842 110 DAKSVIAALKSK-----------GVSAIGAAGFCWGGVVAAKLASSH----DIQAAVVLHPGAITVD------------- 161 (247)
Q Consensus 110 d~~~~i~~l~~~-----------~~~~i~l~G~S~Gg~~a~~~a~~~----~i~~~v~~~~~~~~~~------------- 161 (247)
++.++++|+.+. +..+++++|||.||-.|..+|..+ ++.++|.+.|......
T Consensus 95 ~aa~V~~WL~~gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G~~k~~~t~P~iLty~p 174 (307)
T PF07224_consen 95 SAASVINWLPEGLQHVLPENVEANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVAGTSKGKQTPPPILTYVP 174 (307)
T ss_pred HHHHHHHHHHhhhhhhCCCCcccccceEEEeecCCccHHHHHHHhcccccCchhheecccccCCCCCCCCCCCCeeecCC
Confidence 666777887753 246999999999999999998655 7999999888763321
Q ss_pred ccccccccEEEeecCCC----CCCC---HH--HHHHHHHHHHhccCCCeeEEEeCCCCccccccCCCCCh----------
Q 025842 162 DINEIKVPVAILGAEID----HVSP---PE--DLKRFGEILSAKLKNDCLVKIYPRVSHGWTVRYNVEDE---------- 222 (247)
Q Consensus 162 ~~~~~~~P~l~i~g~~D----~~~~---~~--~~~~~~~~l~~~~~~~~~~~~~~~~~H~~~~~~~~~~~---------- 222 (247)
.--++..|+++|-..-- .+.| ++ +-++|++.. +. ++-..+-.+-||.-..+.....-
T Consensus 175 ~SF~l~iPv~VIGtGLg~~~~~~~~~CaP~gvnH~eFf~eC-k~---p~~hfV~~dYGHmDmLDD~~~g~~G~~~~clCk 250 (307)
T PF07224_consen 175 QSFDLDIPVLVIGTGLGPKRNPLFPPCAPDGVNHEEFFNEC-KP---PCAHFVAKDYGHMDMLDDDTPGIIGKLSYCLCK 250 (307)
T ss_pred cccccCCceEEEecCcCccccCCCCCCCCCCcCHHHHHHhh-cc---cceeeeecccccccccccCccccccceeeEeec
Confidence 11245689988875433 2222 22 346677776 32 45555556678865443322100
Q ss_pred --H--HHHHHHHHHHHHHHHHHHHhccC
Q 025842 223 --F--AVKSAEEAHEDMINWLTKYVKRD 246 (247)
Q Consensus 223 --~--~~~~~~~~~~~~~~fl~~~~~~~ 246 (247)
. ...-++-.--.++.||+.++.++
T Consensus 251 ng~~pr~pMRr~vgGivVAFL~a~l~~~ 278 (307)
T PF07224_consen 251 NGKSPRDPMRRFVGGIVVAFLKAYLEGD 278 (307)
T ss_pred CCCCcchHHHHhhhhhHHHHHHHHHcCC
Confidence 0 01234445567888998887653
No 108
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=99.41 E-value=1.9e-11 Score=91.09 Aligned_cols=182 Identities=19% Similarity=0.210 Sum_probs=116.9
Q ss_pred CCeEEEEEcCccCCCcchH----HHHHHHHHhcCcEEEEeccCCCC-----Ccc-------CCCCcccchHHHHhhcC-C
Q 025842 42 SKSAILLISDVFGYEAPLF----RKLADKVAGAGFLVVAPDFFYGD-----PIV-------DLNNPQFDREAWRKIHN-T 104 (247)
Q Consensus 42 ~~~~vv~~hgg~g~~~~~~----~~~a~~la~~G~~v~~~d~~~g~-----~~~-------~~~~~~~~~~~~~~~~~-~ 104 (247)
+++-||++||..- +...+ ..+-+.|.+. +..+.+|-+|-. +.. .+.....+...|..... .
T Consensus 4 ~k~rvLcLHGfrQ-sg~~F~~Ktg~~rK~l~k~-~el~f~~aPh~~~~~~~~~~~~~~~~~a~~~~~~~~~~Wf~~n~~~ 81 (230)
T KOG2551|consen 4 KKLRVLCLHGFRQ-SGKVFSEKTGSLRKLLKKL-AELVFPDAPHELPKADLPDSEREKKFDAPPDVEQNRYGWFSNNEAS 81 (230)
T ss_pred CCceEEEecchhh-ccHHHHHHhhhHHHHHHhh-heEEecCCCccCCcccCCcccccccccCCcccccchhhhhcccccc
Confidence 4678999995443 22332 2344455454 777777765311 110 01111122456665443 1
Q ss_pred ccccc----hHHHHHHHHHhcCCCeEEEEEecccHHHHHHhhc----------CCCccEEEEecCCCCCc------cccc
Q 025842 105 DKGYV----DAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLAS----------SHDIQAAVVLHPGAITV------DDIN 164 (247)
Q Consensus 105 ~~~~~----d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~----------~~~i~~~v~~~~~~~~~------~~~~ 164 (247)
..... -+..+.+++.++++ ==+|+|+|+|+.++..++. .+.++.+|++++..... ...+
T Consensus 82 ~~~~~~~eesl~yl~~~i~enGP-FDGllGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~v~~SGf~~~~~~~~~~~~~~ 160 (230)
T KOG2551|consen 82 FTEYFGFEESLEYLEDYIKENGP-FDGLLGFSQGAALAALLAGLGQKGLPYVKQPPFKFAVFISGFKFPSKKLDESAYKR 160 (230)
T ss_pred cccccChHHHHHHHHHHHHHhCC-CccccccchhHHHHHHhhcccccCCcccCCCCeEEEEEEecCCCCcchhhhhhhcc
Confidence 11222 25555566666632 2369999999999998774 12789999999887552 2345
Q ss_pred cccccEEEeecCCCCCCCHHHHHHHHHHHHhccCCCeeEEEeCCCCccccccCCCCChHHHHHHHHHHHHHHHHHHHHhc
Q 025842 165 EIKVPVAILGAEIDHVSPPEDLKRFGEILSAKLKNDCLVKIYPRVSHGWTVRYNVEDEFAVKSAEEAHEDMINWLTKYVK 244 (247)
Q Consensus 165 ~~~~P~l~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~ 244 (247)
.+++|.|.+.|+.|.++|.+.++.+++... +..++.-+ +||..-. .....+.+.+||...+.
T Consensus 161 ~i~~PSLHi~G~~D~iv~~~~s~~L~~~~~-----~a~vl~Hp-ggH~VP~------------~~~~~~~i~~fi~~~~~ 222 (230)
T KOG2551|consen 161 PLSTPSLHIFGETDTIVPSERSEQLAESFK-----DATVLEHP-GGHIVPN------------KAKYKEKIADFIQSFLQ 222 (230)
T ss_pred CCCCCeeEEecccceeecchHHHHHHHhcC-----CCeEEecC-CCccCCC------------chHHHHHHHHHHHHHHH
Confidence 789999999999999999999999999983 44666666 5998644 34778888888877654
No 109
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=99.41 E-value=1.1e-12 Score=100.91 Aligned_cols=167 Identities=23% Similarity=0.258 Sum_probs=85.1
Q ss_pred CCeEEEEEcCccCCCcchHHH----HHHHHHhcCcEEEEeccCCCC---CccCCC--------CcccchHHHHhhcCCcc
Q 025842 42 SKSAILLISDVFGYEAPLFRK----LADKVAGAGFLVVAPDFFYGD---PIVDLN--------NPQFDREAWRKIHNTDK 106 (247)
Q Consensus 42 ~~~~vv~~hgg~g~~~~~~~~----~a~~la~~G~~v~~~d~~~g~---~~~~~~--------~~~~~~~~~~~~~~~~~ 106 (247)
+++.||+|| |++.+..-++. +.+.|.+.++..+.+|-++-. +...+. ........|+.......
T Consensus 3 ~k~riLcLH-G~~~na~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~ 81 (212)
T PF03959_consen 3 RKPRILCLH-GYGQNAEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDH 81 (212)
T ss_dssp ---EEEEE---TT--HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SG
T ss_pred CCceEEEeC-CCCcCHHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCcc
Confidence 467899999 66766665543 444554437999999987221 110110 11122234444333223
Q ss_pred ccchHHHHHHHHHh----cCCCeEEEEEecccHHHHHHhhc----------CCCccEEEEecCCCCCcc------ccccc
Q 025842 107 GYVDAKSVIAALKS----KGVSAIGAAGFCWGGVVAAKLAS----------SHDIQAAVVLHPGAITVD------DINEI 166 (247)
Q Consensus 107 ~~~d~~~~i~~l~~----~~~~~i~l~G~S~Gg~~a~~~a~----------~~~i~~~v~~~~~~~~~~------~~~~~ 166 (247)
...++.+.++++.+ .+ .-.+++|||+||.+|..++. .+.++.+|++++...... .-..+
T Consensus 82 ~~~~~~~sl~~l~~~i~~~G-PfdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~~~~~~~~~~i 160 (212)
T PF03959_consen 82 EYEGLDESLDYLRDYIEENG-PFDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPDYQELYDEPKI 160 (212)
T ss_dssp GG---HHHHHHHHHHHHHH----SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE-GTTTT--TT-
T ss_pred cccCHHHHHHHHHHHHHhcC-CeEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchhhhhhhccccC
Confidence 34445555555554 33 25689999999999988762 126899999988775422 13457
Q ss_pred cccEEEeecCCCCCCCHHHHHHHHHHHHhccCCCeeEEEeCCCCccccc
Q 025842 167 KVPVAILGAEIDHVSPPEDLKRFGEILSAKLKNDCLVKIYPRVSHGWTV 215 (247)
Q Consensus 167 ~~P~l~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~H~~~~ 215 (247)
++|+|.++|.+|.+++.+.++.+.+.... ..+++..++ ||.+-.
T Consensus 161 ~iPtlHv~G~~D~~~~~~~s~~L~~~~~~----~~~v~~h~g-GH~vP~ 204 (212)
T PF03959_consen 161 SIPTLHVIGENDPVVPPERSEALAEMFDP----DARVIEHDG-GHHVPR 204 (212)
T ss_dssp --EEEEEEETT-SSS-HHHHHHHHHHHHH----HEEEEEESS-SSS---
T ss_pred CCCeEEEEeCCCCCcchHHHHHHHHhccC----CcEEEEECC-CCcCcC
Confidence 89999999999999999999999999842 177888885 897643
No 110
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.40 E-value=1e-11 Score=91.89 Aligned_cols=179 Identities=16% Similarity=0.194 Sum_probs=116.6
Q ss_pred CeEEEEEcCccCCCcchHHHHHHHHHhcCcEEEEeccC-CCCCccCCCCcccchHHHHhhcCC-----------ccccch
Q 025842 43 KSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNT-----------DKGYVD 110 (247)
Q Consensus 43 ~~~vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~~-~g~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~d 110 (247)
...||++| |.|.+...+.++++.|.-+...-+.|..+ +.. ....+.....|+..... .+..+.
T Consensus 3 ~atIi~LH-glGDsg~~~~~~~~~l~l~NiKwIcP~aP~rpv----t~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~ 77 (206)
T KOG2112|consen 3 TATIIFLH-GLGDSGSGWAQFLKQLPLPNIKWICPTAPSRPV----TLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADN 77 (206)
T ss_pred eEEEEEEe-cCCCCCccHHHHHHcCCCCCeeEEcCCCCCCcc----cccCCCcccceecceeeCcccchhhhHHHHHHHH
Confidence 35688888 66766667766776665556666666543 111 01111111123222111 112223
Q ss_pred HHHHHHHHHhc--CCCeEEEEEecccHHHHHHhhcCC--CccEEEEecCCCC-Ccccccc-----ccccEEEeecCCCCC
Q 025842 111 AKSVIAALKSK--GVSAIGAAGFCWGGVVAAKLASSH--DIQAAVVLHPGAI-TVDDINE-----IKVPVAILGAEIDHV 180 (247)
Q Consensus 111 ~~~~i~~l~~~--~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~~~~~-~~~~~~~-----~~~P~l~i~g~~D~~ 180 (247)
+..+++...+. ...+|++.|+|+||.+++..+... .+.+++..++... ....+.. -..|++..||+.|++
T Consensus 78 i~~Li~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~~p~~~~~~~~~~~~~~~~~i~~~Hg~~d~~ 157 (206)
T KOG2112|consen 78 IANLIDNEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGFLPRASIGLPGWLPGVNYTPILLCHGTADPL 157 (206)
T ss_pred HHHHHHHHHHcCCCccceeEcccCchHHHHHHHHhccccccceeeccccccccchhhccCCccccCcchhheecccCCce
Confidence 33444444343 357999999999999999988544 6666666666654 2111111 157999999999999
Q ss_pred CCHHHHHHHHHHHHhccCCCeeEEEeCCCCccccccCCCCChHHHHHHHHHHHHHHHHHHH
Q 025842 181 SPPEDLKRFGEILSAKLKNDCLVKIYPRVSHGWTVRYNVEDEFAVKSAEEAHEDMINWLTK 241 (247)
Q Consensus 181 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~ 241 (247)
||....+...+.+ ...++.+++..|+|.+|... .+..+++..|+.+
T Consensus 158 vp~~~g~~s~~~l-~~~~~~~~f~~y~g~~h~~~--------------~~e~~~~~~~~~~ 203 (206)
T KOG2112|consen 158 VPFRFGEKSAQFL-KSLGVRVTFKPYPGLGHSTS--------------PQELDDLKSWIKT 203 (206)
T ss_pred eehHHHHHHHHHH-HHcCCceeeeecCCcccccc--------------HHHHHHHHHHHHH
Confidence 9999999999999 66777799999999999853 4678888999876
No 111
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.39 E-value=1.8e-11 Score=92.93 Aligned_cols=165 Identities=18% Similarity=0.233 Sum_probs=111.2
Q ss_pred CCCeEEEEEcCccCCCcchHHHHHHHHHhcCcEEEEeccC-CCCCccCCCCcccchHHHHhhcCCccccchHHHHHHHHH
Q 025842 41 DSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALK 119 (247)
Q Consensus 41 ~~~~~vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~ 119 (247)
+.+..++++|+..| ++..++.+...|-. -+.++.++++ ++... . +....|+.++.+.+.
T Consensus 5 ~~~~~L~cfP~AGG-sa~~fr~W~~~lp~-~iel~avqlPGR~~r~--~----------------ep~~~di~~Lad~la 64 (244)
T COG3208 5 GARLRLFCFPHAGG-SASLFRSWSRRLPA-DIELLAVQLPGRGDRF--G----------------EPLLTDIESLADELA 64 (244)
T ss_pred CCCceEEEecCCCC-CHHHHHHHHhhCCc-hhheeeecCCCccccc--C----------------CcccccHHHHHHHHH
Confidence 45677888886555 45678888887744 4899999996 33321 0 111245555555444
Q ss_pred hc-----CCCeEEEEEecccHHHHHHhhcCC-----CccEEEEecCCCCC------------------------------
Q 025842 120 SK-----GVSAIGAAGFCWGGVVAAKLASSH-----DIQAAVVLHPGAIT------------------------------ 159 (247)
Q Consensus 120 ~~-----~~~~i~l~G~S~Gg~~a~~~a~~~-----~i~~~v~~~~~~~~------------------------------ 159 (247)
.. ...+.+++||||||++|..+|+.. .+.++.+.+.....
T Consensus 65 ~el~~~~~d~P~alfGHSmGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~~~i~~~~D~~~l~~l~~lgG~p~e~l 144 (244)
T COG3208 65 NELLPPLLDAPFALFGHSMGAMLAFEVARRLERAGLPPRALFISGCRAPHYDRGKQIHHLDDADFLADLVDLGGTPPELL 144 (244)
T ss_pred HHhccccCCCCeeecccchhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCcccCCccCCCHHHHHHHHHHhCCCChHHh
Confidence 32 235899999999999999998432 45555544433210
Q ss_pred ------------------------ccccccccccEEEeecCCCCCCCHHHHHHHHHHHHhccCCCeeEEEeCCCCccccc
Q 025842 160 ------------------------VDDINEIKVPVAILGAEIDHVSPPEDLKRFGEILSAKLKNDCLVKIYPRVSHGWTV 215 (247)
Q Consensus 160 ------------------------~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~H~~~~ 215 (247)
-..-..+.+|+.++.|++|..+..+....+.+..+ . ..++..++| +|.|.+
T Consensus 145 ed~El~~l~LPilRAD~~~~e~Y~~~~~~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~-~---~f~l~~fdG-gHFfl~ 219 (244)
T COG3208 145 EDPELMALFLPILRADFRALESYRYPPPAPLACPIHAFGGEKDHEVSRDELGAWREHTK-G---DFTLRVFDG-GHFFLN 219 (244)
T ss_pred cCHHHHHHHHHHHHHHHHHhcccccCCCCCcCcceEEeccCcchhccHHHHHHHHHhhc-C---CceEEEecC-cceehh
Confidence 01123578999999999999999888887877763 2 789999996 999876
Q ss_pred cCCCCChHHHHHHHHHHHHHHHHHH
Q 025842 216 RYNVEDEFAVKSAEEAHEDMINWLT 240 (247)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~fl~ 240 (247)
. ..+++.+.+.+.+.
T Consensus 220 ~----------~~~~v~~~i~~~l~ 234 (244)
T COG3208 220 Q----------QREEVLARLEQHLA 234 (244)
T ss_pred h----------hHHHHHHHHHHHhh
Confidence 3 45566666666664
No 112
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=99.38 E-value=2e-11 Score=100.85 Aligned_cols=195 Identities=20% Similarity=0.203 Sum_probs=132.8
Q ss_pred cCCCCCCeEEEEEcCccCCCcchH-----HHHHHHHHhcCcEEEEeccC-CCCCccCCCCccc--chHHHHhhcCC-ccc
Q 025842 37 SGPPDSKSAILLISDVFGYEAPLF-----RKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQF--DREAWRKIHNT-DKG 107 (247)
Q Consensus 37 p~~~~~~~~vv~~hgg~g~~~~~~-----~~~a~~la~~G~~v~~~d~~-~g~~~~~~~~~~~--~~~~~~~~~~~-~~~ 107 (247)
|...+++|+|++.||..+.+..+. ..++-.|+++||.|+.-+.| ...|+ ..-.... ...-|. .++ |-.
T Consensus 67 p~~~~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr-~h~~l~~~~~~~FW~--FS~~Em~ 143 (403)
T KOG2624|consen 67 PRGKKKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSR-KHKKLSPSSDKEFWD--FSWHEMG 143 (403)
T ss_pred cCCCCCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcCcccch-hhcccCCcCCcceee--cchhhhh
Confidence 444467888899997666432221 45778899999999999997 22232 1111111 110110 111 223
Q ss_pred cchHHHHHHHHHhc-CCCeEEEEEecccHHHHHHhh-cCC----CccEEEEecCCC------------------------
Q 025842 108 YVDAKSVIAALKSK-GVSAIGAAGFCWGGVVAAKLA-SSH----DIQAAVVLHPGA------------------------ 157 (247)
Q Consensus 108 ~~d~~~~i~~l~~~-~~~~i~l~G~S~Gg~~a~~~a-~~~----~i~~~v~~~~~~------------------------ 157 (247)
..|+.++|+++.+. +.+++..+|||+|......+. .++ +|+.++++.|..
T Consensus 144 ~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~~~k~~~~~~~~~~~~~~~~~~~~~ 223 (403)
T KOG2624|consen 144 TYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAAFPKHIKSLLNKFLDPFLGAFSLLP 223 (403)
T ss_pred hcCHHHHHHHHHHhccccceEEEEEEccchhheehhcccchhhhhhheeeeecchhhhcccccHHHHhhhhhhhhhhHHH
Confidence 47999999999987 578999999999999988855 343 688888888775
Q ss_pred --------------------------------------------------------------------------------
Q 025842 158 -------------------------------------------------------------------------------- 157 (247)
Q Consensus 158 -------------------------------------------------------------------------------- 157 (247)
T Consensus 224 ~~fg~~~f~p~~~~~~~~~~~~C~~~~~~~~lC~~~~~~~~G~~~~~~n~~~~~~~~~h~pagtSvk~~~H~~Q~~~s~~ 303 (403)
T KOG2624|consen 224 LLFGRKEFLPSNLFIKKFARKICSGSKIFADLCSNFLFLLVGWNSNNWNTTLLPVYLAHLPAGTSVKNIVHWAQIVRSGK 303 (403)
T ss_pred HhcCCccccchhhHHHHHHHHHhcchhHHHHHHHHHHHHHcCcchHhhhhcccchhhccCCCCccHHHHHHHHHHhcCCC
Confidence
Q ss_pred -------------------CCccccccccccEEEeecCCCCCCCHHHHHHHHHHHHhccCCCeeEEEeCCCCccccccCC
Q 025842 158 -------------------ITVDDINEIKVPVAILGAEIDHVSPPEDLKRFGEILSAKLKNDCLVKIYPRVSHGWTVRYN 218 (247)
Q Consensus 158 -------------------~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~H~~~~~~~ 218 (247)
.+.-++..+++|+.+.+|.+|-+..++.+..+...++. .. ....+.+++-+|.=...+.
T Consensus 304 f~~yD~G~~~N~~~Y~q~~pP~Y~l~~i~~P~~l~~g~~D~l~~~~DV~~~~~~~~~-~~-~~~~~~~~~ynHlDFi~g~ 381 (403)
T KOG2624|consen 304 FRKYDYGSKRNLKHYGQSTPPEYDLTNIKVPTALYYGDNDWLADPEDVLILLLVLPN-SV-IKYIVPIPEYNHLDFIWGL 381 (403)
T ss_pred ccccCCCccccHhhcCCCCCCCCCccccccCEEEEecCCcccCCHHHHHHHHHhccc-cc-ccccccCCCccceeeeecc
Confidence 11224667799999999999999999999988887732 21 1223336777885444444
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHh
Q 025842 219 VEDEFAVKSAEEAHEDMINWLTKYV 243 (247)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~fl~~~~ 243 (247)
. +.++.++.|++.++...
T Consensus 382 d-------a~~~vy~~vi~~~~~~~ 399 (403)
T KOG2624|consen 382 D-------AKEEVYDPVIERLRLFE 399 (403)
T ss_pred C-------cHHHHHHHHHHHHHhhh
Confidence 3 67889999999887654
No 113
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=99.37 E-value=4.8e-11 Score=95.85 Aligned_cols=66 Identities=24% Similarity=0.306 Sum_probs=56.3
Q ss_pred cccEEEeecCCCCCCCHHHHHHHHHHHHhccC-CCeeEEEeCCCCccccccCCCCChHHHHHHHHHHHHHHHHHHHHhcc
Q 025842 167 KVPVAILGAEIDHVSPPEDLKRFGEILSAKLK-NDCLVKIYPRVSHGWTVRYNVEDEFAVKSAEEAHEDMINWLTKYVKR 245 (247)
Q Consensus 167 ~~P~l~i~g~~D~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~ 245 (247)
+.|+++.+|..|.++|....+++.+.+ .+.| .+++++.+++.+|.-.. .......++||+..+.+
T Consensus 219 ~~Pv~i~~g~~D~vvP~~~~~~l~~~~-c~~G~a~V~~~~~~~~~H~~~~-------------~~~~~~a~~Wl~~rf~G 284 (290)
T PF03583_consen 219 TVPVLIYQGTADEVVPPADTDALVAKW-CAAGGADVEYVRYPGGGHLGAA-------------FASAPDALAWLDDRFAG 284 (290)
T ss_pred CCCEEEEecCCCCCCChHHHHHHHHHH-HHcCCCCEEEEecCCCChhhhh-------------hcCcHHHHHHHHHHHCC
Confidence 679999999999999999999999999 5566 79999999999997432 34567888999999876
Q ss_pred C
Q 025842 246 D 246 (247)
Q Consensus 246 ~ 246 (247)
+
T Consensus 285 ~ 285 (290)
T PF03583_consen 285 K 285 (290)
T ss_pred C
Confidence 4
No 114
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=99.36 E-value=3e-11 Score=88.82 Aligned_cols=157 Identities=18% Similarity=0.297 Sum_probs=110.8
Q ss_pred eEEEEEcCccCCCcchHHHHHHHHHhcCcEEEEeccCCCCCccCCCCcccchHHHHhhcCCccccchHHHHHHHHHhc-C
Q 025842 44 SAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSK-G 122 (247)
Q Consensus 44 ~~vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~-~ 122 (247)
..+||+.|-.|+. ..-..+++.|+++|+.|+.+|.+ . -+.+..++++...|+..++++..+. +
T Consensus 3 t~~v~~SGDgGw~-~~d~~~a~~l~~~G~~VvGvdsl-~--------------Yfw~~rtP~~~a~Dl~~~i~~y~~~w~ 66 (192)
T PF06057_consen 3 TLAVFFSGDGGWR-DLDKQIAEALAKQGVPVVGVDSL-R--------------YFWSERTPEQTAADLARIIRHYRARWG 66 (192)
T ss_pred EEEEEEeCCCCch-hhhHHHHHHHHHCCCeEEEechH-H--------------HHhhhCCHHHHHHHHHHHHHHHHHHhC
Confidence 4578888777765 45578999999999999999973 0 1123456677779999999877766 7
Q ss_pred CCeEEEEEecccHHHHHHhh-cCC-----CccEEEEecCCCC---------------------Ccccccccc-ccEEEee
Q 025842 123 VSAIGAAGFCWGGVVAAKLA-SSH-----DIQAAVVLHPGAI---------------------TVDDINEIK-VPVAILG 174 (247)
Q Consensus 123 ~~~i~l~G~S~Gg~~a~~~a-~~~-----~i~~~v~~~~~~~---------------------~~~~~~~~~-~P~l~i~ 174 (247)
.+++.|+|+|+|+-+.-.+. +.+ +|+.+++++|... ....+.++. .|++.|+
T Consensus 67 ~~~vvLiGYSFGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~~~dFeihv~~wlg~~~~~~~~~~~pei~~l~~~~v~Ciy 146 (192)
T PF06057_consen 67 RKRVVLIGYSFGADVLPFIYNRLPAALRARVAQVVLLSPSTTADFEIHVSGWLGMGGDDAAYPVIPEIAKLPPAPVQCIY 146 (192)
T ss_pred CceEEEEeecCCchhHHHHHhhCCHHHHhheeEEEEeccCCcceEEEEhhhhcCCCCCcccCCchHHHHhCCCCeEEEEE
Confidence 88999999999997766543 333 8999999888762 112344444 4899999
Q ss_pred cCCCC--CCCHHHHHHHHHHHHhccCCCeeEEEeCCCCccccccCCCCChHHHHHHHHHHHHHHHHHH
Q 025842 175 AEIDH--VSPPEDLKRFGEILSAKLKNDCLVKIYPRVSHGWTVRYNVEDEFAVKSAEEAHEDMINWLT 240 (247)
Q Consensus 175 g~~D~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~ 240 (247)
|.+|. .|| .+.+ ...+.+.+|| ||-|..+ ...+.+.|++-++
T Consensus 147 G~~E~d~~cp---------~l~~---~~~~~i~lpG-gHHfd~d-----------y~~La~~Il~~l~ 190 (192)
T PF06057_consen 147 GEDEDDSLCP---------SLRQ---PGVEVIALPG-GHHFDGD-----------YDALAKRILDALK 190 (192)
T ss_pred cCCCCCCcCc---------cccC---CCcEEEEcCC-CcCCCCC-----------HHHHHHHHHHHHh
Confidence 98765 333 2312 2789999997 6667554 3456666666554
No 115
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=99.35 E-value=1.9e-10 Score=96.55 Aligned_cols=185 Identities=9% Similarity=0.019 Sum_probs=114.2
Q ss_pred ceEEEeecCC--CCCCeEEEEEcCccCCCcchHHHHHHHHHhcC----cEEEEeccCCCCCccCCCCcccchHHHHhhcC
Q 025842 30 LNTYVTGSGP--PDSKSAILLISDVFGYEAPLFRKLADKVAGAG----FLVVAPDFFYGDPIVDLNNPQFDREAWRKIHN 103 (247)
Q Consensus 30 ~~~~~~~p~~--~~~~~~vv~~hgg~g~~~~~~~~~a~~la~~G----~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~ 103 (247)
...+++.|.. ..+.|.|+++||..-..........+.|.++| ..++.+|...+............+..+
T Consensus 194 r~v~VY~P~~y~~~~~PvlyllDG~~w~~~~~~~~~ld~li~~g~i~P~ivV~id~~~~~~R~~el~~~~~f~~~----- 268 (411)
T PRK10439 194 RRVWIYTTGDAAPEERPLAILLDGQFWAESMPVWPALDSLTHRGQLPPAVYLLIDAIDTTHRSQELPCNADFWLA----- 268 (411)
T ss_pred eEEEEEECCCCCCCCCCEEEEEECHHhhhcCCHHHHHHHHHHcCCCCceEEEEECCCCcccccccCCchHHHHHH-----
Confidence 6678887753 23456677777533222223445666777776 446777753111110000011111111
Q ss_pred CccccchHHHHHHHHHhc-----CCCeEEEEEecccHHHHHHhhcCC--CccEEEEecCCCCCc-----------cccc-
Q 025842 104 TDKGYVDAKSVIAALKSK-----GVSAIGAAGFCWGGVVAAKLASSH--DIQAAVVLHPGAITV-----------DDIN- 164 (247)
Q Consensus 104 ~~~~~~d~~~~i~~l~~~-----~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~~~~~~~-----------~~~~- 164 (247)
-+.+++-++++. +.++.+|+|+||||..|+.++..+ .+.++++++|++.-. +.+.
T Consensus 269 ------l~~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ww~~~~~~~~~~l~~~l~~ 342 (411)
T PRK10439 269 ------VQQELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSFWWPHRGGQQEGVLLEQLKA 342 (411)
T ss_pred ------HHHHHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEeccceecCCccCCchhHHHHHHHh
Confidence 133445555543 557899999999999999998654 899999999886211 0111
Q ss_pred ----cccccEEEeecCCCCCCCHHHHHHHHHHHHhccCCCeeEEEeCCCCccccccCCCCChHHHHHHHHHHHHHHHHHH
Q 025842 165 ----EIKVPVAILGAEIDHVSPPEDLKRFGEILSAKLKNDCLVKIYPRVSHGWTVRYNVEDEFAVKSAEEAHEDMINWLT 240 (247)
Q Consensus 165 ----~~~~P~l~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~ 240 (247)
.....+++-+|..|... .+..+++.+.| ++.|.++++.+++| ||.+.. .+..+...+.||-
T Consensus 343 ~~~~~~~lr~~i~~G~~E~~~-~~~~~~l~~~L-~~~G~~~~~~~~~G-GHd~~~------------Wr~~L~~~L~~l~ 407 (411)
T PRK10439 343 GEVSARGLRIVLEAGRREPMI-MRANQALYAQL-HPAGHSVFWRQVDG-GHDALC------------WRGGLIQGLIDLW 407 (411)
T ss_pred cccCCCCceEEEeCCCCCchH-HHHHHHHHHHH-HHCCCcEEEEECCC-CcCHHH------------HHHHHHHHHHHHh
Confidence 11236888889888544 46778999999 66888999999997 798644 4556666666664
No 116
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.35 E-value=2.4e-10 Score=88.59 Aligned_cols=139 Identities=17% Similarity=0.231 Sum_probs=98.3
Q ss_pred CCeEEEEEcCccCCCcchHHHHHHHHHhcCcEEEEeccC-CCCCccCCCCcccchHHHHhhcCCccccchHHHHHHHHHh
Q 025842 42 SKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKS 120 (247)
Q Consensus 42 ~~~~vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~ 120 (247)
+.++||-+||..|++ .+++.+...|.+.|++++.++|+ .|... .+...... + +....-+.++++.|.-
T Consensus 34 ~~gTVv~~hGsPGSH-~DFkYi~~~l~~~~iR~I~iN~PGf~~t~-~~~~~~~~--n-------~er~~~~~~ll~~l~i 102 (297)
T PF06342_consen 34 PLGTVVAFHGSPGSH-NDFKYIRPPLDEAGIRFIGINYPGFGFTP-GYPDQQYT--N-------EERQNFVNALLDELGI 102 (297)
T ss_pred CceeEEEecCCCCCc-cchhhhhhHHHHcCeEEEEeCCCCCCCCC-CCcccccC--h-------HHHHHHHHHHHHHcCC
Confidence 456788899888875 67899999999999999999997 45433 12221111 1 1111234444444422
Q ss_pred cCCCeEEEEEecccHHHHHHhhcCCCccEEEEecCCCCC-----------------------------------------
Q 025842 121 KGVSAIGAAGFCWGGVVAAKLASSHDIQAAVVLHPGAIT----------------------------------------- 159 (247)
Q Consensus 121 ~~~~~i~l~G~S~Gg~~a~~~a~~~~i~~~v~~~~~~~~----------------------------------------- 159 (247)
.++++++|||.|+-.|+.++......++++++|....
T Consensus 103 --~~~~i~~gHSrGcenal~la~~~~~~g~~lin~~G~r~HkgIrp~~r~~~i~~l~~~lp~~~~~~i~~~~y~~iG~KV 180 (297)
T PF06342_consen 103 --KGKLIFLGHSRGCENALQLAVTHPLHGLVLINPPGLRPHKGIRPLSRMETINYLYDLLPRFIINAIMYFYYRMIGFKV 180 (297)
T ss_pred --CCceEEEEeccchHHHHHHHhcCccceEEEecCCccccccCcCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhCeee
Confidence 2699999999999999999977777788988877510
Q ss_pred ------------------------ccccccccccEEEeecCCCCCCCHHHHHHHHHHH
Q 025842 160 ------------------------VDDINEIKVPVAILGAEIDHVSPPEDLKRFGEIL 193 (247)
Q Consensus 160 ------------------------~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~l 193 (247)
.+.+.+-++|+|+++|.+|.++..+.+.++.+..
T Consensus 181 ~~GeeA~na~r~m~~~df~~q~~~I~~ln~~~ikvli~ygg~DhLIEeeI~~E~a~~f 238 (297)
T PF06342_consen 181 SDGEEAINAMRSMQNCDFEEQKEYIDKLNKKPIKVLIAYGGKDHLIEEEISFEFAMKF 238 (297)
T ss_pred cChHHHHHHHHHHHhcCHHHHHHHHHHhccCCCcEEEEEcCcchhhHHHHHHHHHHHh
Confidence 2345566789999999999999877777665544
No 117
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=99.35 E-value=1.2e-10 Score=96.57 Aligned_cols=192 Identities=15% Similarity=0.093 Sum_probs=126.2
Q ss_pred cCceEEEeecCCCC--C-CeEEEEEcCccCCCcchHHHHHHHHHhcCcEEEEeccCCCCCccC-CCCcccchHHHHhhcC
Q 025842 28 GGLNTYVTGSGPPD--S-KSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYGDPIVD-LNNPQFDREAWRKIHN 103 (247)
Q Consensus 28 ~~~~~~~~~p~~~~--~-~~~vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~-~~~~~~~~~~~~~~~~ 103 (247)
+-..++-+.|..+. . .++||++....+......+.+.+.|.+ |+.|+..|.. .+... .......+.++.
T Consensus 84 ~~~~L~~y~~~~~~~~~~~~pvLiV~Pl~g~~~~L~RS~V~~Ll~-g~dVYl~DW~--~p~~vp~~~~~f~ldDYi---- 156 (406)
T TIGR01849 84 PFCRLIHFKRQGFRAELPGPAVLIVAPMSGHYATLLRSTVEALLP-DHDVYITDWV--NARMVPLSAGKFDLEDYI---- 156 (406)
T ss_pred CCeEEEEECCCCcccccCCCcEEEEcCCchHHHHHHHHHHHHHhC-CCcEEEEeCC--CCCCCchhcCCCCHHHHH----
Confidence 33566666443222 1 368888886666444445788899988 9999999994 22201 112233333332
Q ss_pred CccccchHHHHHHHHHhcCCCeEEEEEecccHHHHHHhh-----cC-C-CccEEEEecCCC-------------------
Q 025842 104 TDKGYVDAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLA-----SS-H-DIQAAVVLHPGA------------------- 157 (247)
Q Consensus 104 ~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a-----~~-~-~i~~~v~~~~~~------------------- 157 (247)
+ .+++.++..+.+ +.++|+|+||.+++.++ .. + .++.++++.+..
T Consensus 157 -----~---~l~~~i~~~G~~-v~l~GvCqgG~~~laa~Al~a~~~~p~~~~sltlm~~PID~~~~p~~v~~~a~~~~i~ 227 (406)
T TIGR01849 157 -----D---YLIEFIRFLGPD-IHVIAVCQPAVPVLAAVALMAENEPPAQPRSMTLMGGPIDARASPTVVNELAREKPIE 227 (406)
T ss_pred -----H---HHHHHHHHhCCC-CcEEEEchhhHHHHHHHHHHHhcCCCCCcceEEEEecCccCCCCCchHHHHhhcccHH
Confidence 2 333444444666 99999999999977643 22 2 588887766533
Q ss_pred --------------------------------------------------------------------------------
Q 025842 158 -------------------------------------------------------------------------------- 157 (247)
Q Consensus 158 -------------------------------------------------------------------------------- 157 (247)
T Consensus 228 ~~~~~~i~~vp~~~~g~gr~v~PG~~~~~~F~~mnp~r~~~~~~~~~~~l~~gd~~~~~~~~~f~~~y~d~~dlpge~y~ 307 (406)
T TIGR01849 228 WFQHNVIMRVPFPYPGAGRLVYPGFLQLAGFISMNLDRHTKAHSDFFLHLVKGDGQEADKHRIFYDEYLAVMDMTAEFYL 307 (406)
T ss_pred HHHHHhhhccCccccCCCCcccCHHHHHHHHHHcCcchHHHHHHHHHHHHhcCCcchHHHHHHHHHHhhhccCCcHHHHH
Confidence
Q ss_pred --------------------CCcccccccc-ccEEEeecCCCCCCCHHHHHHHHHHHHhccCCCeeEEEeCCCCcccccc
Q 025842 158 --------------------ITVDDINEIK-VPVAILGAEIDHVSPPEDLKRFGEILSAKLKNDCLVKIYPRVSHGWTVR 216 (247)
Q Consensus 158 --------------------~~~~~~~~~~-~P~l~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~H~~~~~ 216 (247)
...-++++|+ +|+|.+.|++|+++|++.+..+.+.+..-+...++.++.+++||.-...
T Consensus 308 ~~v~~vf~~n~L~~G~l~v~G~~Vdl~~I~~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~ 387 (406)
T TIGR01849 308 QTIDVVFQQFLLPQGKFIVEGKRVDPGAITRVALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVFS 387 (406)
T ss_pred HHHHHHHHhCCccCCcEEECCEEecHHHCcccceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCeEEEee
Confidence 0022577898 9999999999999999999999997511111155566776689965544
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHHH
Q 025842 217 YNVEDEFAVKSAEEAHEDMINWLTKY 242 (247)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~fl~~~ 242 (247)
+. ...++.|..+.+||.++
T Consensus 388 G~-------r~~~~i~P~i~~wl~~~ 406 (406)
T TIGR01849 388 GS-------RFREEIYPLVREFIRRN 406 (406)
T ss_pred Ch-------hhhhhhchHHHHHHHhC
Confidence 44 36889999999999863
No 118
>COG4099 Predicted peptidase [General function prediction only]
Probab=99.33 E-value=1.1e-11 Score=95.94 Aligned_cols=112 Identities=24% Similarity=0.231 Sum_probs=80.7
Q ss_pred CCCeEEEEEecccHHHHHHhhcCC--CccEEEEecCCCCCccccccc-cccEEEeecCCCCCCCHHHHHHHHHHHHhccC
Q 025842 122 GVSAIGAAGFCWGGVVAAKLASSH--DIQAAVVLHPGAITVDDINEI-KVPVAILGAEIDHVSPPEDLKRFGEILSAKLK 198 (247)
Q Consensus 122 ~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~~~~~~~~~~~~~-~~P~l~i~g~~D~~~~~~~~~~~~~~l~~~~~ 198 (247)
|.+||.++|.|+||+.++.++.+. .+.+.+++++.-.....++.+ +.|+.++|+.+|.++|.+++.-+++.+ ..-+
T Consensus 267 D~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~~d~v~lv~~lk~~piWvfhs~dDkv~Pv~nSrv~y~~l-k~~~ 345 (387)
T COG4099 267 DRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGGGDRVYLVRTLKKAPIWVFHSSDDKVIPVSNSRVLYERL-KALD 345 (387)
T ss_pred ccceEEEEeecCcchhhHHHHHhCchhhheeeeecCCCchhhhhhhhccCceEEEEecCCCccccCcceeehHHH-Hhhc
Confidence 678999999999999999998554 888999999887755566655 489999999999999999999888888 4444
Q ss_pred CCeeEEEeC---CCCccccccCCCCChHHHHHHHHHHHHHHHHHHH
Q 025842 199 NDCLVKIYP---RVSHGWTVRYNVEDEFAVKSAEEAHEDMINWLTK 241 (247)
Q Consensus 199 ~~~~~~~~~---~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~ 241 (247)
.++.+..|. -.-|++...+.+ ..---...+.+||-+
T Consensus 346 ~kv~Ytaf~~g~~~~eG~d~~g~w-------~atyn~~eaieWLl~ 384 (387)
T COG4099 346 RKVNYTAFLEGTTVLEGVDHSGVW-------WATYNDAEAIEWLLK 384 (387)
T ss_pred cccchhhhhhccccccccCCCCcc-------eeecCCHHHHHHHHh
Confidence 455555555 223444433332 122233456667654
No 119
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=99.32 E-value=3.6e-11 Score=96.64 Aligned_cols=161 Identities=23% Similarity=0.315 Sum_probs=106.9
Q ss_pred CeEEEEEcCccCCCcchHHHHHHHHHhcCcEEEEeccCCCCCccCC--CCcc---cchHHHHhhcCCccccchHHHHHHH
Q 025842 43 KSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDL--NNPQ---FDREAWRKIHNTDKGYVDAKSVIAA 117 (247)
Q Consensus 43 ~~~vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~--~~~~---~~~~~~~~~~~~~~~~~d~~~~i~~ 117 (247)
.-|||++.||.|.....+..++++|++.||.|..++++ |...... .... .....|.. ...|+..++++
T Consensus 70 ~~PlvvlshG~Gs~~~~f~~~A~~lAs~Gf~Va~~~hp-gs~~~~~~~~~~~~~~~~p~~~~e------rp~dis~lLd~ 142 (365)
T COG4188 70 LLPLVVLSHGSGSYVTGFAWLAEHLASYGFVVAAPDHP-GSNAGGAPAAYAGPGSYAPAEWWE------RPLDISALLDA 142 (365)
T ss_pred cCCeEEecCCCCCCccchhhhHHHHhhCceEEEeccCC-CcccccCChhhcCCcccchhhhhc------ccccHHHHHHH
Confidence 44555555588877888999999999999999999996 3211001 1101 12223433 34788888888
Q ss_pred HHhc----------CCCeEEEEEecccHHHHHHhhcC-------------------------------------------
Q 025842 118 LKSK----------GVSAIGAAGFCWGGVVAAKLASS------------------------------------------- 144 (247)
Q Consensus 118 l~~~----------~~~~i~l~G~S~Gg~~a~~~a~~------------------------------------------- 144 (247)
|.+. +..+|+++|||+||+.++.++..
T Consensus 143 L~~~~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~~~~~~~~C~~~~~~~~~~~~~~~~~l~q~~av~~~~~~~~ 222 (365)
T COG4188 143 LLQLTASPALAGRLDPQRVGVLGHSFGGYTAMELAGAELDAEALLQHCESASRICLDPPGLNGRLLNQCAAVWLPRQAYD 222 (365)
T ss_pred HHHhhcCcccccccCccceEEEecccccHHHHHhccccccHHHHHHHhhhhhhcccCCCCcChhhhccccccccchhhhc
Confidence 8765 34699999999999999987621
Q ss_pred ---CCccEEEEecCCCC---CccccccccccEEEeecCCCCCCCHHHH-HHHHHHHHhccCCCeeEEEeCCCCccc
Q 025842 145 ---HDIQAAVVLHPGAI---TVDDINEIKVPVAILGAEIDHVSPPEDL-KRFGEILSAKLKNDCLVKIYPRVSHGW 213 (247)
Q Consensus 145 ---~~i~~~v~~~~~~~---~~~~~~~~~~P~l~i~g~~D~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~H~~ 213 (247)
++|+++++..|... ...-+.+++.|++++.|..|.+.|...- ......+ +|...-+.+.+++.|.-
T Consensus 223 ~rDpriravvA~~p~~~~~Fg~tgl~~v~~P~~~~a~s~D~~aP~~~~~~~~f~~l---~g~~k~~~~vp~a~h~s 295 (365)
T COG4188 223 LRDPRIRAVVAINPALGMIFGTTGLVKVTDPVLLAAGSADGFAPPVTEQIRPFGYL---PGALKYLRLVPGATHFS 295 (365)
T ss_pred cccccceeeeeccCCcccccccccceeeecceeeecccccccCCcccccccccccC---CcchhheeecCCCcccc
Confidence 13555555554431 2456778899999999999987654432 2334444 23344577888888853
No 120
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=99.29 E-value=1.4e-10 Score=93.09 Aligned_cols=165 Identities=16% Similarity=0.218 Sum_probs=108.6
Q ss_pred CCeEEEEEcCccCCCcchHH-H-HHHHHHhcCcEEEEeccC-CCCCccCCCCcccchHHHHhh-cCCccccchHHHHHHH
Q 025842 42 SKSAILLISDVFGYEAPLFR-K-LADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKI-HNTDKGYVDAKSVIAA 117 (247)
Q Consensus 42 ~~~~vv~~hgg~g~~~~~~~-~-~a~~la~~G~~v~~~d~~-~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~~i~~ 117 (247)
.+|.+|.+. |.|.+..+.+ . +|..|.++|+..+++..+ +|... +..........-... ..-...+.+...+++|
T Consensus 91 ~rp~~IhLa-gTGDh~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~Rk-P~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll~W 168 (348)
T PF09752_consen 91 YRPVCIHLA-GTGDHGFWRRRRLMARPLLKEGIASLILENPYYGQRK-PKDQRRSSLRNVSDLFVMGRATILESRALLHW 168 (348)
T ss_pred CCceEEEec-CCCccchhhhhhhhhhHHHHcCcceEEEecccccccC-hhHhhcccccchhHHHHHHhHHHHHHHHHHHH
Confidence 467777777 5554432222 3 488888889999999988 77654 222221111110000 0013345678899999
Q ss_pred HHhcCCCeEEEEEecccHHHHHHhhcC-C-CccEEEEecCCCC-------------------------------------
Q 025842 118 LKSKGVSAIGAAGFCWGGVVAAKLASS-H-DIQAAVVLHPGAI------------------------------------- 158 (247)
Q Consensus 118 l~~~~~~~i~l~G~S~Gg~~a~~~a~~-~-~i~~~v~~~~~~~------------------------------------- 158 (247)
+++++..++++.|.||||.+|..+|.. + .+..+-.+++...
T Consensus 169 l~~~G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~sAs~vFt~Gvls~~i~W~~L~~q~~~~~~~~~~~~~~~~ 248 (348)
T PF09752_consen 169 LEREGYGPLGLTGISMGGHMAALAASNWPRPVALVPCLSWSSASVVFTEGVLSNSINWDALEKQFEDTVYEEEISDIPAQ 248 (348)
T ss_pred HHhcCCCceEEEEechhHhhHHhhhhcCCCceeEEEeecccCCCcchhhhhhhcCCCHHHHHHHhcccchhhhhcccccC
Confidence 999999999999999999999997754 3 3333333443320
Q ss_pred ---------------------------Cccccccccc-----cEEEeecCCCCCCCHHHHHHHHHHHHhccCCCeeEEEe
Q 025842 159 ---------------------------TVDDINEIKV-----PVAILGAEIDHVSPPEDLKRFGEILSAKLKNDCLVKIY 206 (247)
Q Consensus 159 ---------------------------~~~~~~~~~~-----P~l~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 206 (247)
...++.+..+ .++++.+++|..+|......+.+.++ .+++.++
T Consensus 249 ~~~~~~~~~~~~~~~~Ea~~~m~~~md~~T~l~nf~~P~dp~~ii~V~A~~DaYVPr~~v~~Lq~~WP-----GsEvR~l 323 (348)
T PF09752_consen 249 NKSLPLDSMEERRRDREALRFMRGVMDSFTHLTNFPVPVDPSAIIFVAAKNDAYVPRHGVLSLQEIWP-----GSEVRYL 323 (348)
T ss_pred cccccchhhccccchHHHHHHHHHHHHhhccccccCCCCCCCcEEEEEecCceEechhhcchHHHhCC-----CCeEEEe
Confidence 0012222323 38999999999999999999999985 6788889
Q ss_pred CCCCcccc
Q 025842 207 PRVSHGWT 214 (247)
Q Consensus 207 ~~~~H~~~ 214 (247)
+| ||--.
T Consensus 324 ~g-GHVsA 330 (348)
T PF09752_consen 324 PG-GHVSA 330 (348)
T ss_pred cC-CcEEE
Confidence 97 99543
No 121
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=99.29 E-value=9.8e-12 Score=91.32 Aligned_cols=157 Identities=12% Similarity=0.160 Sum_probs=111.5
Q ss_pred CCCCCCeEEEEEcCccC--CCcchHHHHHHHHHhcCcEEEEeccCCCCCccCCCCcccchHHHHhhcCCccccchHHHHH
Q 025842 38 GPPDSKSAILLISDVFG--YEAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVI 115 (247)
Q Consensus 38 ~~~~~~~~vv~~hgg~g--~~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i 115 (247)
.++...+..||+|||+= ++-..-...+.-..++||+|++++| +.+. +..+.++.+.++...+
T Consensus 62 g~~~~~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasvgY--~l~~--------------q~htL~qt~~~~~~gv 125 (270)
T KOG4627|consen 62 GSTNQAKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASVGY--NLCP--------------QVHTLEQTMTQFTHGV 125 (270)
T ss_pred cCCCCccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEecc--CcCc--------------ccccHHHHHHHHHHHH
Confidence 44556789999998762 1111122344445578999999999 3321 1112233446777778
Q ss_pred HHHHhc--CCCeEEEEEecccHHHHHHhh---cCCCccEEEEecCCCC-------------------------Ccccccc
Q 025842 116 AALKSK--GVSAIGAAGFCWGGVVAAKLA---SSHDIQAAVVLHPGAI-------------------------TVDDINE 165 (247)
Q Consensus 116 ~~l~~~--~~~~i~l~G~S~Gg~~a~~~a---~~~~i~~~v~~~~~~~-------------------------~~~~~~~ 165 (247)
+++.+. ..+.+.+.|||.|+.+++.+. +.++|.+++++++... ....+..
T Consensus 126 ~filk~~~n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~l~EL~~te~g~dlgLt~~~ae~~Scdl~~~~~ 205 (270)
T KOG4627|consen 126 NFILKYTENTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYDLRELSNTESGNDLGLTERNAESVSCDLWEYTD 205 (270)
T ss_pred HHHHHhcccceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhhHHHHhCCccccccCcccchhhhcCccHHHhcC
Confidence 887776 456888999999999999854 3459999999888762 1224567
Q ss_pred ccccEEEeecCCCCCCCHHHHHHHHHHHHhccCCCeeEEEeCCCCccccc
Q 025842 166 IKVPVAILGAEIDHVSPPEDLKRFGEILSAKLKNDCLVKIYPRVSHGWTV 215 (247)
Q Consensus 166 ~~~P~l~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~H~~~~ 215 (247)
++.|+|++.|..|..--.+..+.+.+.+. +..+.++++.+|.-..
T Consensus 206 v~~~ilVv~~~~espklieQnrdf~~q~~-----~a~~~~f~n~~hy~I~ 250 (270)
T KOG4627|consen 206 VTVWILVVAAEHESPKLIEQNRDFADQLR-----KASFTLFKNYDHYDII 250 (270)
T ss_pred ceeeeeEeeecccCcHHHHhhhhHHHHhh-----hcceeecCCcchhhHH
Confidence 88999999999998666788888888874 5789999998996443
No 122
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.21 E-value=9.7e-10 Score=97.70 Aligned_cols=100 Identities=18% Similarity=0.168 Sum_probs=68.5
Q ss_pred CeEEEEEcCccCCCcchHHHHHHHHHhcCcEEEEeccC-CCCCccCCCCcc-----cchHHHHh-------hcCCccccc
Q 025842 43 KSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQ-----FDREAWRK-------IHNTDKGYV 109 (247)
Q Consensus 43 ~~~vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~~-~g~~~~~~~~~~-----~~~~~~~~-------~~~~~~~~~ 109 (247)
.|+||++| |++.+...|..+++.|+++||.|+++|++ ||.+........ .....++. +....+.+.
T Consensus 449 ~P~VVllH-G~~g~~~~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~ 527 (792)
T TIGR03502 449 WPVVIYQH-GITGAKENALAFAGTLAAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQSIL 527 (792)
T ss_pred CcEEEEeC-CCCCCHHHHHHHHHHHHhCCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCHHHHHH
Confidence 46788888 55555678899999999999999999999 888731211000 00000111 123455667
Q ss_pred hHHHHHHHHH------h-------cCCCeEEEEEecccHHHHHHhhc
Q 025842 110 DAKSVIAALK------S-------KGVSAIGAAGFCWGGVVAAKLAS 143 (247)
Q Consensus 110 d~~~~i~~l~------~-------~~~~~i~l~G~S~Gg~~a~~~a~ 143 (247)
|+..+...+. + .+..++.++||||||.++..++.
T Consensus 528 Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~ 574 (792)
T TIGR03502 528 DLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIA 574 (792)
T ss_pred HHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHH
Confidence 8888887777 1 23469999999999999998763
No 123
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.15 E-value=2.5e-10 Score=91.12 Aligned_cols=108 Identities=17% Similarity=0.175 Sum_probs=72.4
Q ss_pred CCCeEEEEEcCccCCC-cchHHHHHHHHH-hcCcEEEEeccCCCCCccCCCCcccchHHHHhhcCCccccchHHHHHHHH
Q 025842 41 DSKSAILLISDVFGYE-APLFRKLADKVA-GAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAAL 118 (247)
Q Consensus 41 ~~~~~vv~~hgg~g~~-~~~~~~~a~~la-~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l 118 (247)
..+|++|++||+.+.. ..+...+++.+. ..+|.|+++|++.+ .. ..... .........+++..+++.+
T Consensus 34 ~~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~-~~--~~y~~-------a~~~~~~v~~~la~~l~~L 103 (275)
T cd00707 34 PSRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRG-AN--PNYPQ-------AVNNTRVVGAELAKFLDFL 103 (275)
T ss_pred CCCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccc-cc--cChHH-------HHHhHHHHHHHHHHHHHHH
Confidence 3468899999766643 233345666554 45899999999622 21 11111 0111122336677888887
Q ss_pred Hhc---CCCeEEEEEecccHHHHHHhhcCC--CccEEEEecCCCC
Q 025842 119 KSK---GVSAIGAAGFCWGGVVAAKLASSH--DIQAAVVLHPGAI 158 (247)
Q Consensus 119 ~~~---~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~~~~~ 158 (247)
.+. +.+++.++|||+||.++..++... +++.++++.|...
T Consensus 104 ~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p 148 (275)
T cd00707 104 VDNTGLSLENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGP 148 (275)
T ss_pred HHhcCCChHHEEEEEecHHHHHHHHHHHHhcCccceeEEecCCcc
Confidence 664 457999999999999999988554 8999999988753
No 124
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=99.15 E-value=2e-09 Score=87.80 Aligned_cols=190 Identities=18% Similarity=0.204 Sum_probs=125.3
Q ss_pred ceEEEeecCCCC-CCeEEEEEcCccCC----CcchHHHHHHHHHhcCcEEEEeccC-CCCCccCCCCcccchHHHHhhcC
Q 025842 30 LNTYVTGSGPPD-SKSAILLISDVFGY----EAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHN 103 (247)
Q Consensus 30 ~~~~~~~p~~~~-~~~~vv~~hgg~g~----~~~~~~~~a~~la~~G~~v~~~d~~-~g~~~~~~~~~~~~~~~~~~~~~ 103 (247)
.....+.|..+. -.+|++++|..... +...-..++..|.++|..|+.++.+ ...+. ......++.
T Consensus 93 ~~liqy~p~~e~v~~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~-----~~~~~edYi---- 163 (445)
T COG3243 93 LELIQYKPLTEKVLKRPLLIVPPWINKFYILDLSPEKSLVRWLLEQGLDVFVISWRNPDASL-----AAKNLEDYI---- 163 (445)
T ss_pred hhhhccCCCCCccCCCceEeeccccCceeEEeCCCCccHHHHHHHcCCceEEEeccCchHhh-----hhccHHHHH----
Confidence 444444444433 35788888865541 1112256888999999999999995 11111 111112222
Q ss_pred CccccchHHHHHHHHHhc-CCCeEEEEEecccHHHHHHhhcCC---CccEEEEecCCC----------------------
Q 025842 104 TDKGYVDAKSVIAALKSK-GVSAIGAAGFCWGGVVAAKLASSH---DIQAAVVLHPGA---------------------- 157 (247)
Q Consensus 104 ~~~~~~d~~~~i~~l~~~-~~~~i~l~G~S~Gg~~a~~~a~~~---~i~~~v~~~~~~---------------------- 157 (247)
.+.+..+++.+++. +.++|-++|+|+||+++..++... +|+.++.+....
T Consensus 164 ----~e~l~~aid~v~~itg~~~InliGyCvGGtl~~~ala~~~~k~I~S~T~lts~~DF~~~g~l~if~n~~~~~~~~~ 239 (445)
T COG3243 164 ----LEGLSEAIDTVKDITGQKDINLIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVDFSHAGDLGIFANEATIEALDA 239 (445)
T ss_pred ----HHHHHHHHHHHHHHhCccccceeeEecchHHHHHHHHhhhhcccccceeeecchhhccccccccccCHHHHHHHHh
Confidence 16788888888887 558999999999999988865332 477777654332
Q ss_pred --------------------------------------------------------------------------------
Q 025842 158 -------------------------------------------------------------------------------- 157 (247)
Q Consensus 158 -------------------------------------------------------------------------------- 157 (247)
T Consensus 240 ~i~~~g~lpg~~ma~~F~mLrpndliw~~fV~nyl~ge~pl~fdllyWn~dst~~~~~~~~~~Lrn~y~~N~l~~g~~~v 319 (445)
T COG3243 240 DIVQKGILPGWYMAIVFFLLRPNDLIWNYFVNNYLDGEQPLPFDLLYWNADSTRLPGAAHSEYLRNFYLENRLIRGGLEV 319 (445)
T ss_pred hhhhccCCChHHHHHHHHhcCccccchHHHHHHhcCCCCCCchhHHHhhCCCccCchHHHHHHHHHHHHhChhhccceEE
Confidence
Q ss_pred -CCccccccccccEEEeecCCCCCCCHHHHHHHHHHHHhccCCCeeEEEeCCCCccccccCCCCChHHHHHHHHHHH---
Q 025842 158 -ITVDDINEIKVPVAILGAEIDHVSPPEDLKRFGEILSAKLKNDCLVKIYPRVSHGWTVRYNVEDEFAVKSAEEAHE--- 233 (247)
Q Consensus 158 -~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~--- 233 (247)
...-++.+++||++++.+++|++.|..++....+.++ | +++++..+ .||--..-.++. ....+.|.
T Consensus 320 ~G~~VdL~~It~pvy~~a~~~DhI~P~~Sv~~g~~l~~---g-~~~f~l~~-sGHIa~vVN~p~-----~~k~~~w~n~~ 389 (445)
T COG3243 320 SGTMVDLGDITCPVYNLAAEEDHIAPWSSVYLGARLLG---G-EVTFVLSR-SGHIAGVVNPPG-----NAKYQYWTNLP 389 (445)
T ss_pred CCEEechhhcccceEEEeecccccCCHHHHHHHHHhcC---C-ceEEEEec-CceEEEEeCCcc-----hhhhhcCCCCc
Confidence 0123678899999999999999999999888888773 2 67888877 699544333222 13445555
Q ss_pred -HHHHHHHHH
Q 025842 234 -DMINWLTKY 242 (247)
Q Consensus 234 -~~~~fl~~~ 242 (247)
....|+.+.
T Consensus 390 ~~~~~Wl~~a 399 (445)
T COG3243 390 ADAEAWLSGA 399 (445)
T ss_pred chHHHHHHhh
Confidence 777777654
No 125
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.13 E-value=4.3e-10 Score=87.55 Aligned_cols=208 Identities=15% Similarity=0.123 Sum_probs=112.8
Q ss_pred ceEEEeecCCC-CCCeEEEEEcCccCCCcchHHHHH--HHHHh-cCcEEEEeccCCCCCccCCCCcccchHHHHhhcCCc
Q 025842 30 LNTYVTGSGPP-DSKSAILLISDVFGYEAPLFRKLA--DKVAG-AGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTD 105 (247)
Q Consensus 30 ~~~~~~~p~~~-~~~~~vv~~hgg~g~~~~~~~~~a--~~la~-~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~ 105 (247)
...+++.|... ...|.||+|||+.+. ...+.... +.||+ .||.|+.||-. ...+ .+. ....|....+..
T Consensus 47 r~y~l~vP~g~~~~apLvv~LHG~~~s-gag~~~~sg~d~lAd~~gFlV~yPdg~-~~~w-n~~----~~~~~~~p~~~~ 119 (312)
T COG3509 47 RSYRLYVPPGLPSGAPLVVVLHGSGGS-GAGQLHGTGWDALADREGFLVAYPDGY-DRAW-NAN----GCGNWFGPADRR 119 (312)
T ss_pred cceEEEcCCCCCCCCCEEEEEecCCCC-hHHhhcccchhhhhcccCcEEECcCcc-cccc-CCC----cccccCCccccc
Confidence 55566655433 334788999976653 33444433 56665 49999999764 2222 111 112222222211
Q ss_pred c---ccchHHHHHHHHHhc---CCCeEEEEEecccHHHHHHhhcC-C-CccEEEEecCCC-CCccccccccccEEEeecC
Q 025842 106 K---GYVDAKSVIAALKSK---GVSAIGAAGFCWGGVVAAKLASS-H-DIQAAVVLHPGA-ITVDDINEIKVPVAILGAE 176 (247)
Q Consensus 106 ~---~~~d~~~~i~~l~~~---~~~~i~l~G~S~Gg~~a~~~a~~-~-~i~~~v~~~~~~-~~~~~~~~~~~P~l~i~g~ 176 (247)
. .+..+.++++.+... +..||++.|.|.||.|+..++-. + .+.++..+.+.. ........-..+++.++|.
T Consensus 120 ~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~~~~~a~~~~rp~~~m~~~G~ 199 (312)
T COG3509 120 RGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLLALGVACTPPRPVSVMAFHGT 199 (312)
T ss_pred CCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeecccCCCcccCCCCchhHHHhcCC
Confidence 2 223456666666654 56799999999999999998855 4 556665666544 2222222223455666666
Q ss_pred CCCCCC------------------HHHHHHHHHHHH----------------------hccCCCeeEEEeCCCCcccccc
Q 025842 177 IDHVSP------------------PEDLKRFGEILS----------------------AKLKNDCLVKIYPRVSHGWTVR 216 (247)
Q Consensus 177 ~D~~~~------------------~~~~~~~~~~l~----------------------~~~~~~~~~~~~~~~~H~~~~~ 216 (247)
.|+..| .....+....+. .+.+..+++..+++.||.+...
T Consensus 200 ~Dp~~p~~gG~~~~g~g~~~~~v~~~~~~~~Waa~ng~~~~p~~~~~~~~~~~~~~~~~~~~~~V~~y~i~g~GH~wp~~ 279 (312)
T COG3509 200 ADPLNPYHGGGVPIGRGQRDGVVSAADLAARWAAVNGCQAGPDTAELPDVGDGTDYDTCDGNARVELYTIDGGGHTWPGG 279 (312)
T ss_pred CCCCCCCCCCCcccccccccccccHHHHHHHHHHhcCCCCCCcccccCCCcccceeeccCCCcceEEEEEeCCcccCcCC
Confidence 666554 222222222210 1123477899999999998642
Q ss_pred CCC-C-ChHHHHHHHHHHHHHHHHHHHHhc
Q 025842 217 YNV-E-DEFAVKSAEEAHEDMINWLTKYVK 244 (247)
Q Consensus 217 ~~~-~-~~~~~~~~~~~~~~~~~fl~~~~~ 244 (247)
... . -.......-...+.|-+||+.+-+
T Consensus 280 ~~~~~~~~g~~t~~~dat~~iw~Ff~~~~R 309 (312)
T COG3509 280 TQYGPAALGMSTRGFDATERIWRFFRQHRR 309 (312)
T ss_pred CCCCcccccccccCcchHHHHHHHHHhccc
Confidence 111 0 000000112356677788887643
No 126
>KOG3101 consensus Esterase D [General function prediction only]
Probab=99.10 E-value=2.9e-10 Score=84.02 Aligned_cols=184 Identities=16% Similarity=0.186 Sum_probs=101.7
Q ss_pred eEEEeecCCCCCCeEEEEEcCccCCCcchHHH--HHHHHH-hcCcEEEEeccC-CCCCccCCCCc------------ccc
Q 025842 31 NTYVTGSGPPDSKSAILLISDVFGYEAPLFRK--LADKVA-GAGFLVVAPDFF-YGDPIVDLNNP------------QFD 94 (247)
Q Consensus 31 ~~~~~~p~~~~~~~~vv~~hgg~g~~~~~~~~--~a~~la-~~G~~v~~~d~~-~g~~~~~~~~~------------~~~ 94 (247)
..|+....+++++-|+||+--|..++.+++.. -.+..| ..|+.|+.||.. +|..- ..+.. ...
T Consensus 31 ~vylPp~a~~~k~~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v-~g~~eswDFG~GAGFYvnAt 109 (283)
T KOG3101|consen 31 GVYLPPDAPRGKRCPVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEV-AGDDESWDFGQGAGFYVNAT 109 (283)
T ss_pred EEecCCCcccCCcCceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCCCCCcccc-CCCcccccccCCceeEEecc
Confidence 34444223344444555544466666555532 223333 569999999986 55421 11111 122
Q ss_pred hHHHHhhc-CCccccchHHHHHH-HHHhcCCCeEEEEEecccHHHHHHhhcCC--CccEEEEecCCCCC-----------
Q 025842 95 REAWRKIH-NTDKGYVDAKSVIA-ALKSKGVSAIGAAGFCWGGVVAAKLASSH--DIQAAVVLHPGAIT----------- 159 (247)
Q Consensus 95 ~~~~~~~~-~~~~~~~d~~~~i~-~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~~~~~~----------- 159 (247)
.+.|.+.+ .++-....+...++ .-...+..++++.||||||.-|+..+.+. +.+.+-+|.|...+
T Consensus 110 ~epw~~~yrMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~NP~~cpWGqKAf~ 189 (283)
T KOG3101|consen 110 QEPWAKHYRMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICNPINCPWGQKAFT 189 (283)
T ss_pred cchHhhhhhHHHHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceeccccccCcccCcchHHHhh
Confidence 24454422 11222222222222 11112567999999999999999977544 77777777776521
Q ss_pred ------------------ccccccccccEEEeecCCCCCCCHHHH-HHHHHHHHhccCCCeeEEEeCCCCccccc
Q 025842 160 ------------------VDDINEIKVPVAILGAEIDHVSPPEDL-KRFGEILSAKLKNDCLVKIYPRVSHGWTV 215 (247)
Q Consensus 160 ------------------~~~~~~~~~P~l~i~g~~D~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~H~~~~ 215 (247)
....+....-+||-+|..|++.+.+.- +.+.++.......++.+..-+|-.|.+..
T Consensus 190 gYLG~~ka~W~~yDat~lik~y~~~~~~ilIdqG~~D~Fl~~qLlPe~l~~a~~~~~~~~v~~r~~~gyDHSYyf 264 (283)
T KOG3101|consen 190 GYLGDNKAQWEAYDATHLIKNYRGVGDDILIDQGAADNFLAEQLLPENLLEACKATWQAPVVFRLQEGYDHSYYF 264 (283)
T ss_pred cccCCChHHHhhcchHHHHHhcCCCCccEEEecCccchhhhhhcChHHHHHHhhccccccEEEEeecCCCcceee
Confidence 123455566799999999998863332 23344432111136777788888887644
No 127
>PRK04940 hypothetical protein; Provisional
Probab=99.07 E-value=4.5e-09 Score=77.18 Aligned_cols=96 Identities=13% Similarity=0.093 Sum_probs=72.9
Q ss_pred CeEEEEEecccHHHHHHhhcCCCccEEEEecCCCCCcc---------------------cccccccc--EEEeecCCCCC
Q 025842 124 SAIGAAGFCWGGVVAAKLASSHDIQAAVVLHPGAITVD---------------------DINEIKVP--VAILGAEIDHV 180 (247)
Q Consensus 124 ~~i~l~G~S~Gg~~a~~~a~~~~i~~~v~~~~~~~~~~---------------------~~~~~~~P--~l~i~g~~D~~ 180 (247)
+++.++|.|+||+.|..+|....++ +|+++|...+.. .++ ++.| .+++..+.|.+
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~g~~-aVLiNPAv~P~~~L~~~ig~~~~y~~~~~~h~~eL~-~~~p~r~~vllq~gDEv 137 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLCGIR-QVIFNPNLFPEENMEGKIDRPEEYADIATKCVTNFR-EKNRDRCLVILSRNDEV 137 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHHCCC-EEEECCCCChHHHHHHHhCCCcchhhhhHHHHHHhh-hcCcccEEEEEeCCCcc
Confidence 5799999999999999999999886 556677663321 121 2333 58899999999
Q ss_pred CCHHHHHHHHHHHHhccCCCeeEEEeCCCCccccccCCCCChHHHHHHHHHHHHHHHHHH
Q 025842 181 SPPEDLKRFGEILSAKLKNDCLVKIYPRVSHGWTVRYNVEDEFAVKSAEEAHEDMINWLT 240 (247)
Q Consensus 181 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~ 240 (247)
.+...+.+.+.. ..+..+.+|+.|.|.. .++....|++|+.
T Consensus 138 LDyr~a~~~y~~-------~y~~~v~~GGdH~f~~------------fe~~l~~I~~F~~ 178 (180)
T PRK04940 138 LDSQRTAEELHP-------YYEIVWDEEQTHKFKN------------ISPHLQRIKAFKT 178 (180)
T ss_pred cCHHHHHHHhcc-------CceEEEECCCCCCCCC------------HHHHHHHHHHHHh
Confidence 987776665542 1268899999999965 4789999999985
No 128
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.06 E-value=8.8e-09 Score=87.09 Aligned_cols=117 Identities=16% Similarity=0.270 Sum_probs=86.8
Q ss_pred CCCeEEEEEecccHHHHHHhhcCC---CccEEEEecCCC--------CCccccccccccEEEeecCCCCCCCHHHHHHHH
Q 025842 122 GVSAIGAAGFCWGGVVAAKLASSH---DIQAAVVLHPGA--------ITVDDINEIKVPVAILGAEIDHVSPPEDLKRFG 190 (247)
Q Consensus 122 ~~~~i~l~G~S~Gg~~a~~~a~~~---~i~~~v~~~~~~--------~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~ 190 (247)
...+|+|+|+|||+.++..++... .|.++|.++=.. ...+.+.+++.|+|++.|.+|..++....+++.
T Consensus 248 pha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigypl~~vdgprgirDE~Lldmk~PVLFV~Gsnd~mcspn~ME~vr 327 (784)
T KOG3253|consen 248 PHAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYPLDTVDGPRGIRDEALLDMKQPVLFVIGSNDHMCSPNSMEEVR 327 (784)
T ss_pred CCCceEEEecccCceeeEEeccccCCceEEEEEEecccccCCCcccCCcchhhHhcCCceEEEecCCcccCCHHHHHHHH
Confidence 356999999999988888877544 588888776333 334567789999999999999999999999999
Q ss_pred HHHHhccCCCeeEEEeCCCCccccccCCCCChHHHHHHHHHHHHHHHHHHHHh
Q 025842 191 EILSAKLKNDCLVKIYPRVSHGWTVRYNVEDEFAVKSAEEAHEDMINWLTKYV 243 (247)
Q Consensus 191 ~~l~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~ 243 (247)
+++ +. ..+++++.+++|.+.....-...+. -.+.++...+.+||.+.+
T Consensus 328 eKM-qA---~~elhVI~~adhsmaipk~k~eseg-ltqseVd~~i~~aI~efv 375 (784)
T KOG3253|consen 328 EKM-QA---EVELHVIGGADHSMAIPKRKVESEG-LTQSEVDSAIAQAIKEFV 375 (784)
T ss_pred HHh-hc---cceEEEecCCCccccCCcccccccc-ccHHHHHHHHHHHHHHHH
Confidence 999 44 7899999999999987652211110 124455555556665544
No 129
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=99.06 E-value=4.9e-09 Score=83.28 Aligned_cols=165 Identities=15% Similarity=0.216 Sum_probs=106.7
Q ss_pred CeEEEEEcCccCCCcchHHHHHHHHHhc---CcEEEEeccCCCCCccCCCCcccchHHHHhhcCCccccchHHHHHHHHH
Q 025842 43 KSAILLISDVFGYEAPLFRKLADKVAGA---GFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALK 119 (247)
Q Consensus 43 ~~~vv~~hgg~g~~~~~~~~~a~~la~~---G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~ 119 (247)
+..+|+++|-.|. .+.|..+.+.|.++ .|.|+++.+. |.+. .+...... .. ....+.+.+++-..++++.+.
T Consensus 2 ~~li~~IPGNPGl-v~fY~~Fl~~L~~~l~~~~~i~~ish~-Gh~~-~~~~~~~~-~~-~~~~sL~~QI~hk~~~i~~~~ 76 (266)
T PF10230_consen 2 RPLIVFIPGNPGL-VEFYEEFLSALYEKLNPQFEILGISHA-GHST-SPSNSKFS-PN-GRLFSLQDQIEHKIDFIKELI 76 (266)
T ss_pred cEEEEEECCCCCh-HHHHHHHHHHHHHhCCCCCeeEEecCC-CCcC-Cccccccc-CC-CCccCHHHHHHHHHHHHHHHh
Confidence 4678999976675 57888888888754 7999999995 4433 11111000 00 111122222233333343333
Q ss_pred hc---CCCeEEEEEecccHHHHHHhhcC-----CCccEEEEecCCCC---------------------------------
Q 025842 120 SK---GVSAIGAAGFCWGGVVAAKLASS-----HDIQAAVVLHPGAI--------------------------------- 158 (247)
Q Consensus 120 ~~---~~~~i~l~G~S~Gg~~a~~~a~~-----~~i~~~v~~~~~~~--------------------------------- 158 (247)
.. ...+++++|||.|+++++.+..+ .+|+.++++.|...
T Consensus 77 ~~~~~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~~ia~Sp~G~~l~~~~~~~~~~~~~~~~~~~l~~ 156 (266)
T PF10230_consen 77 PQKNKPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIEDIAKSPNGRRLTPLLFSPPPLVWLASFLSFLLS 156 (266)
T ss_pred hhhcCCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCccccccCCchhHHHHHHHhhccHHHHHHHHHHHHHH
Confidence 32 35699999999999999998732 28999999998860
Q ss_pred ---------------------------------------------------Cc-cc-cccc---cccEEEeecCCCCCCC
Q 025842 159 ---------------------------------------------------TV-DD-INEI---KVPVAILGAEIDHVSP 182 (247)
Q Consensus 159 ---------------------------------------------------~~-~~-~~~~---~~P~l~i~g~~D~~~~ 182 (247)
.. +. ++.. ...+.+.+|.+|..||
T Consensus 157 ~lP~~~~~~lv~~~~~~~~~~~~~t~~~l~~~~~v~qaL~Ma~~Em~~I~~~d~~~~~~~~~~~~~kl~f~fg~~D~Wvp 236 (266)
T PF10230_consen 157 LLPESVLRWLVRWVMGFPPPAVEATTKFLLSPRVVRQALYMARDEMREIREDDNDELIKHHNENGDKLWFYFGQNDHWVP 236 (266)
T ss_pred HCCHHHHHHHHHHHcCCChHHHHHHHHHhcCHHHHHHHHHHHHHHHHHccCcchHHHHHHhccCCCEEEEEEeCCCCCCC
Confidence 01 11 1222 5689999999999999
Q ss_pred HHHHHHHHHHHHhccCCCeeEEEeCCCCcccc
Q 025842 183 PEDLKRFGEILSAKLKNDCLVKIYPRVSHGWT 214 (247)
Q Consensus 183 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~H~~~ 214 (247)
.+..+++.+..+. ...++++.. +|..|+|.
T Consensus 237 ~~~~~~l~~~~~~-~~~~~~v~~-~~i~HaFc 266 (266)
T PF10230_consen 237 NETRDELIERYPG-HEPDVVVDE-EGIPHAFC 266 (266)
T ss_pred HHHHHHHHHHcCC-CCCeEEEec-CCCCCCCC
Confidence 9999999998842 222455555 78888873
No 130
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=99.05 E-value=2.8e-08 Score=71.76 Aligned_cols=88 Identities=10% Similarity=0.107 Sum_probs=70.7
Q ss_pred CCeEEEEEecccHHHHHHhhcC--CCccEEEEecCCCCCcc-------------ccccccccEEEeecCCCCCCCHHHHH
Q 025842 123 VSAIGAAGFCWGGVVAAKLASS--HDIQAAVVLHPGAITVD-------------DINEIKVPVAILGAEIDHVSPPEDLK 187 (247)
Q Consensus 123 ~~~i~l~G~S~Gg~~a~~~a~~--~~i~~~v~~~~~~~~~~-------------~~~~~~~P~l~i~g~~D~~~~~~~~~ 187 (247)
.+++++++||+|..+++.++.. ..|++++++.|...... ......-|.+++.+.+|+.++++.++
T Consensus 58 ~~~~vlVAHSLGc~~v~h~~~~~~~~V~GalLVAppd~~~~~~~~~~~~tf~~~p~~~lpfps~vvaSrnDp~~~~~~a~ 137 (181)
T COG3545 58 EGPVVLVAHSLGCATVAHWAEHIQRQVAGALLVAPPDVSRPEIRPKHLMTFDPIPREPLPFPSVVVASRNDPYVSYEHAE 137 (181)
T ss_pred CCCeEEEEecccHHHHHHHHHhhhhccceEEEecCCCccccccchhhccccCCCccccCCCceeEEEecCCCCCCHHHHH
Confidence 4569999999999999998844 39999999998764321 12234458999999999999999999
Q ss_pred HHHHHHHhccCCCeeEEEeCCCCcccccc
Q 025842 188 RFGEILSAKLKNDCLVKIYPRVSHGWTVR 216 (247)
Q Consensus 188 ~~~~~l~~~~~~~~~~~~~~~~~H~~~~~ 216 (247)
.+.+.+ ...++....+||.....
T Consensus 138 ~~a~~w------gs~lv~~g~~GHiN~~s 160 (181)
T COG3545 138 DLANAW------GSALVDVGEGGHINAES 160 (181)
T ss_pred HHHHhc------cHhheecccccccchhh
Confidence 999999 45788888889965443
No 131
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.04 E-value=3.9e-09 Score=88.53 Aligned_cols=105 Identities=13% Similarity=0.106 Sum_probs=70.6
Q ss_pred CCeEEEEEcCccCCC-cchHH-HHHHHHHh--cCcEEEEeccC-CCCCccCCCCcccchHHHHhhcCCccccchHHHHHH
Q 025842 42 SKSAILLISDVFGYE-APLFR-KLADKVAG--AGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIA 116 (247)
Q Consensus 42 ~~~~vv~~hgg~g~~-~~~~~-~~a~~la~--~G~~v~~~d~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~ 116 (247)
..|++|++||+.+.. ...|. .+++.|.. ..|+|+++|++ +|.+. .+... .. .....+++.++++
T Consensus 40 ~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~-y~~a~--~~--------t~~vg~~la~lI~ 108 (442)
T TIGR03230 40 ETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQH-YPTSA--AY--------TKLVGKDVAKFVN 108 (442)
T ss_pred CCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCC-Ccccc--cc--------HHHHHHHHHHHHH
Confidence 468899999765432 22343 46665543 25999999997 55432 11111 00 0122256777888
Q ss_pred HHHhc---CCCeEEEEEecccHHHHHHhhcCC--CccEEEEecCCC
Q 025842 117 ALKSK---GVSAIGAAGFCWGGVVAAKLASSH--DIQAAVVLHPGA 157 (247)
Q Consensus 117 ~l~~~---~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~~~~ 157 (247)
+|.+. +.+++.++||||||.+|..++... +|..+++++|..
T Consensus 109 ~L~~~~gl~l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAg 154 (442)
T TIGR03230 109 WMQEEFNYPWDNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAG 154 (442)
T ss_pred HHHHhhCCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCC
Confidence 77643 467999999999999999988553 899999999865
No 132
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.03 E-value=3.2e-08 Score=76.93 Aligned_cols=169 Identities=20% Similarity=0.253 Sum_probs=104.4
Q ss_pred eEEEEEcCccCCCcchHHHHHHHHHhcCcEEEEeccCCCCCccCCCCcccchHHHHhhcCCccccchHHHHHHHHHhcCC
Q 025842 44 SAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSKGV 123 (247)
Q Consensus 44 ~~vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~ 123 (247)
++|+++|++.| +...|..+++.|....+.|+.++++ |... ......++. +-+...++.++....
T Consensus 1 ~~lf~~p~~gG-~~~~y~~la~~l~~~~~~v~~i~~~-~~~~--~~~~~~si~------------~la~~y~~~I~~~~~ 64 (229)
T PF00975_consen 1 RPLFCFPPAGG-SASSYRPLARALPDDVIGVYGIEYP-GRGD--DEPPPDSIE------------ELASRYAEAIRARQP 64 (229)
T ss_dssp -EEEEESSTTC-SGGGGHHHHHHHTTTEEEEEEECST-TSCT--TSHEESSHH------------HHHHHHHHHHHHHTS
T ss_pred CeEEEEcCCcc-CHHHHHHHHHhCCCCeEEEEEEecC-CCCC--CCCCCCCHH------------HHHHHHHHHhhhhCC
Confidence 46899997666 5678899999997656889999985 3211 111111111 234455666665543
Q ss_pred -CeEEEEEecccHHHHHHhhcC-----CCccEEEEecCCCCC--------------------------------------
Q 025842 124 -SAIGAAGFCWGGVVAAKLASS-----HDIQAAVVLHPGAIT-------------------------------------- 159 (247)
Q Consensus 124 -~~i~l~G~S~Gg~~a~~~a~~-----~~i~~~v~~~~~~~~-------------------------------------- 159 (247)
.++.++|||+||.+|+.+|+. ..+..++++++....
T Consensus 65 ~gp~~L~G~S~Gg~lA~E~A~~Le~~G~~v~~l~liD~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (229)
T PF00975_consen 65 EGPYVLAGWSFGGILAFEMARQLEEAGEEVSRLILIDSPPPSIKERPRSREPSDEQFIEELRRIGGTPDASLEDEELLAR 144 (229)
T ss_dssp SSSEEEEEETHHHHHHHHHHHHHHHTT-SESEEEEESCSSTTCHSCHHHHHCHHHHHHHHHHHHCHHHHHHCHHHHHHHH
T ss_pred CCCeeehccCccHHHHHHHHHHHHHhhhccCceEEecCCCCCcccchhhhhhhHHHHHHHHHHhcCCchhhhcCHHHHHH
Confidence 499999999999999998832 278999999854310
Q ss_pred -------------ccccccc---cccEEEeecCCCCCCCHHHHHHHHHHHHhccCCCeeEEEeCCCCccccccCCCCChH
Q 025842 160 -------------VDDINEI---KVPVAILGAEIDHVSPPEDLKRFGEILSAKLKNDCLVKIYPRVSHGWTVRYNVEDEF 223 (247)
Q Consensus 160 -------------~~~~~~~---~~P~l~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~ 223 (247)
....... .+|..+.....|+...........+ +........+++.++| +|..... .
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-W~~~~~~~~~~~~v~G-~H~~~l~-~----- 216 (229)
T PF00975_consen 145 LLRALRDDFQALENYSIRPIDKQKVPITLFYALDDPLVSMDRLEEADR-WWDYTSGDVEVHDVPG-DHFSMLK-P----- 216 (229)
T ss_dssp HHHHHHHHHHHHHTCS-TTSSSESSEEEEEEECSSSSSSHHCGGHHCH-HHGCBSSSEEEEEESS-ETTGHHS-T-----
T ss_pred HHHHHHHHHHHHhhccCCccccCCCcEEEEecCCCccccchhhhhHHH-HHHhcCCCcEEEEEcC-CCcEecc-h-----
Confidence 0001111 3468888888888776552122111 2132333678999996 9987664 2
Q ss_pred HHHHHHHHHHHHHHHH
Q 025842 224 AVKSAEEAHEDMINWL 239 (247)
Q Consensus 224 ~~~~~~~~~~~~~~fl 239 (247)
...+..+.|.+||
T Consensus 217 ---~~~~i~~~I~~~~ 229 (229)
T PF00975_consen 217 ---HVAEIAEKIAEWL 229 (229)
T ss_dssp ---THHHHHHHHHHHH
T ss_pred ---HHHHHHHHHhccC
Confidence 2355556665554
No 133
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.02 E-value=2.7e-08 Score=77.66 Aligned_cols=165 Identities=22% Similarity=0.374 Sum_probs=101.5
Q ss_pred CeEEEEEcCccCCCcchHHHHHHHHHhc--CcEEEEeccC-CCCCccCCCCcccchHHHHhhcCCccccchHHHHHHHHH
Q 025842 43 KSAILLISDVFGYEAPLFRKLADKVAGA--GFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALK 119 (247)
Q Consensus 43 ~~~vv~~hgg~g~~~~~~~~~a~~la~~--G~~v~~~d~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~ 119 (247)
.++|+++||+.+.. ..+......+... .|.++.+|.+ +|.+. ........+ ..++..+++
T Consensus 21 ~~~i~~~hg~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~g~g~s~----~~~~~~~~~---------~~~~~~~~~--- 83 (282)
T COG0596 21 GPPLVLLHGFPGSS-SVWRPVFKVLPALAARYRVIAPDLRGHGRSD----PAGYSLSAY---------ADDLAALLD--- 83 (282)
T ss_pred CCeEEEeCCCCCch-hhhHHHHHHhhccccceEEEEecccCCCCCC----cccccHHHH---------HHHHHHHHH---
Confidence 55899999666643 4444422223221 1999999998 55542 000011111 244444444
Q ss_pred hcCCCeEEEEEecccHHHHHHhhcCC--CccEEEEecCCC---------------------------C------------
Q 025842 120 SKGVSAIGAAGFCWGGVVAAKLASSH--DIQAAVVLHPGA---------------------------I------------ 158 (247)
Q Consensus 120 ~~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~~~~---------------------------~------------ 158 (247)
..+..++.++|||+||.+++.++... .+++++++++.. .
T Consensus 84 ~~~~~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (282)
T COG0596 84 ALGLEKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAPPPGLLEAALRQPAGAAPLAALADLLLGLDAAAFAALLAAL 163 (282)
T ss_pred HhCCCceEEEEecccHHHHHHHHHhcchhhheeeEecCCCCcccccCccccCccccchhhhhhhhhccchhhhhhhhhcc
Confidence 34556799999999999999988543 567776666321 0
Q ss_pred --------------C-----------------------------------ccccccccccEEEeecCCCCCCCHHHHHHH
Q 025842 159 --------------T-----------------------------------VDDINEIKVPVAILGAEIDHVSPPEDLKRF 189 (247)
Q Consensus 159 --------------~-----------------------------------~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~ 189 (247)
. ......+.+|+++++|.+|.+.|......+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~d~~~~~~~~~~~ 243 (282)
T COG0596 164 GLLAALAAAARAGLAEALRAPLLGAAAAAFARAARADLAAALLALLDRDLRAALARITVPTLIIHGEDDPVVPAELARRL 243 (282)
T ss_pred cccccccccchhccccccccccchhHhhhhhhhcccccchhhhcccccccchhhccCCCCeEEEecCCCCcCCHHHHHHH
Confidence 0 012344568999999999977776664555
Q ss_pred HHHHHhccCCCeeEEEeCCCCccccccCCCCChHHHHHHHHHHHHHHHH
Q 025842 190 GEILSAKLKNDCLVKIYPRVSHGWTVRYNVEDEFAVKSAEEAHEDMINW 238 (247)
Q Consensus 190 ~~~l~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~f 238 (247)
.+.++ + ..++.++++++|..... ......+.+.+|
T Consensus 244 ~~~~~---~-~~~~~~~~~~gH~~~~~----------~p~~~~~~i~~~ 278 (282)
T COG0596 244 AAALP---N-DARLVVIPGAGHFPHLE----------APEAFAAALLAF 278 (282)
T ss_pred HhhCC---C-CceEEEeCCCCCcchhh----------cHHHHHHHHHHH
Confidence 55542 1 47899999999987664 334556666653
No 134
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=99.01 E-value=2.2e-09 Score=68.62 Aligned_cols=55 Identities=22% Similarity=0.348 Sum_probs=43.4
Q ss_pred ceEEEeecCCCCC-CeEEEEEcCccCCCcchHHHHHHHHHhcCcEEEEeccC-CCCCc
Q 025842 30 LNTYVTGSGPPDS-KSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPI 85 (247)
Q Consensus 30 ~~~~~~~p~~~~~-~~~vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~~-~g~~~ 85 (247)
.++++..+.++.+ +..|+++| |++.+...+..+++.|+++||.|+++|+| ||.|.
T Consensus 2 ~~L~~~~w~p~~~~k~~v~i~H-G~~eh~~ry~~~a~~L~~~G~~V~~~D~rGhG~S~ 58 (79)
T PF12146_consen 2 TKLFYRRWKPENPPKAVVVIVH-GFGEHSGRYAHLAEFLAEQGYAVFAYDHRGHGRSE 58 (79)
T ss_pred cEEEEEEecCCCCCCEEEEEeC-CcHHHHHHHHHHHHHHHhCCCEEEEECCCcCCCCC
Confidence 4455555555544 67777777 77777788999999999999999999999 88875
No 135
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=99.01 E-value=1.2e-09 Score=86.32 Aligned_cols=114 Identities=15% Similarity=0.241 Sum_probs=73.7
Q ss_pred HHHHHHHHhc---CCCeEEEEEecccHHHHHHhhcCC--CccEEEEecCCCCCc-------------c----------cc
Q 025842 112 KSVIAALKSK---GVSAIGAAGFCWGGVVAAKLASSH--DIQAAVVLHPGAITV-------------D----------DI 163 (247)
Q Consensus 112 ~~~i~~l~~~---~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~~~~~~~-------------~----------~~ 163 (247)
.+++.++++. ...+.+++|+||||..|+.++.++ .+.++++++|..... . ..
T Consensus 100 ~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 179 (251)
T PF00756_consen 100 EELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGALDPSPSLWGPSDDEAWKENDPFDLIKALSQ 179 (251)
T ss_dssp THHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEESETTHCHHHHSTCGHHGGCHHHHHHHHHHH
T ss_pred ccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCccccccccccCcCCcHHhhhccHHHHhhhhhc
Confidence 3555555554 233489999999999999988554 899999999652110 0 11
Q ss_pred ccccccEEEeecCCCCCCC----------HHHHHHHHHHHHhccCCCeeEEEeCCCCccccccCCCCChHHHHHHHHHHH
Q 025842 164 NEIKVPVAILGAEIDHVSP----------PEDLKRFGEILSAKLKNDCLVKIYPRVSHGWTVRYNVEDEFAVKSAEEAHE 233 (247)
Q Consensus 164 ~~~~~P~l~i~g~~D~~~~----------~~~~~~~~~~l~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~ 233 (247)
.....++++..|..|.... ......+.+.+ ...+.+..+..++| +|.+.. .+..+.
T Consensus 180 ~~~~~~i~l~~G~~d~~~~~~~~~~~~~~~~~~~~~~~~l-~~~g~~~~~~~~~G-~H~~~~------------W~~~l~ 245 (251)
T PF00756_consen 180 KKKPLRIYLDVGTKDEFGGWEDSAQILQFLANNRELAQLL-KAKGIPHTYHVFPG-GHDWAY------------WRRRLP 245 (251)
T ss_dssp TTSEEEEEEEEETTSTTHHCSHHHHHHHHHHHHHHHHHHC-CCEECTTESEEEHS-ESSHHH------------HHHHHH
T ss_pred ccCCCeEEEEeCCCCcccccccCHHHHHHHHHhHhhHHHH-HHcCCCceEEEecC-ccchhh------------HHHHHH
Confidence 2234678999999988432 11222333334 44567888889995 888633 566777
Q ss_pred HHHHHH
Q 025842 234 DMINWL 239 (247)
Q Consensus 234 ~~~~fl 239 (247)
..+.||
T Consensus 246 ~~L~~~ 251 (251)
T PF00756_consen 246 DALPWM 251 (251)
T ss_dssp HHHHHH
T ss_pred HHHhhC
Confidence 777765
No 136
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=98.98 E-value=3e-07 Score=74.58 Aligned_cols=187 Identities=15% Similarity=0.168 Sum_probs=115.9
Q ss_pred CCCCeEEEEEcCccCCCc---chHHHHHHHHHhcCcEEEEeccCC--CCCccCCCCc------------ccchH------
Q 025842 40 PDSKSAILLISDVFGYEA---PLFRKLADKVAGAGFLVVAPDFFY--GDPIVDLNNP------------QFDRE------ 96 (247)
Q Consensus 40 ~~~~~~vv~~hgg~g~~~---~~~~~~a~~la~~G~~v~~~d~~~--g~~~~~~~~~------------~~~~~------ 96 (247)
....+.||++| +.|.+. .....+-+.|.+.||.++++..+. +... +... .....
T Consensus 84 ~~~~G~vIilp-~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~--p~~~~~~~~~~~a~~~~~~~~~~~~~~ 160 (310)
T PF12048_consen 84 AKPQGAVIILP-DWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPAS--PNRATEAEEVPSAGDQQLSQPSDEPSP 160 (310)
T ss_pred CCCceEEEEec-CCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccC--CccCCCCCCCCCCCCCCcCCCCCCCcc
Confidence 34567899999 445332 334567778889999999998862 1100 0000 00000
Q ss_pred -----HHHhhcCCccccchHHHHHHHHHhcCCCeEEEEEecccHHHHHHhhcCC---CccEEEEecCCCCCcc-------
Q 025842 97 -----AWRKIHNTDKGYVDAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLASSH---DIQAAVVLHPGAITVD------- 161 (247)
Q Consensus 97 -----~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~---~i~~~v~~~~~~~~~~------- 161 (247)
.-......+.....+.+++.++.+.+..+|+++||+.|+..++.+..+. .+.++|++++......
T Consensus 161 ~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~~~~~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I~a~~p~~~~n~~l~~ 240 (310)
T PF12048_consen 161 ASAQEAEAREAYEERLFARIEAAIAFAQQQGGKNIVLIGHGTGAGWAARYLAEKPPPMPDALVLINAYWPQPDRNPALAE 240 (310)
T ss_pred ccccHhHHhHHHHHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHhcCCCcccCeEEEEeCCCCcchhhhhHHH
Confidence 0000001133445688888888888878899999999999999976443 6899999998875432
Q ss_pred ccccccccEEEeecCCCCCCCHHHHHHHHHHH-HhccCCCeeEEEeCCCCccccccCCCCChHHHHHHHHHHHHHHHHHH
Q 025842 162 DINEIKVPVAILGAEIDHVSPPEDLKRFGEIL-SAKLKNDCLVKIYPRVSHGWTVRYNVEDEFAVKSAEEAHEDMINWLT 240 (247)
Q Consensus 162 ~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~ 240 (247)
.+..++.|||=|+..+ .-..... ....+.+ .+..+...+-..+.+..|.... ..+.+.++|..||+
T Consensus 241 ~la~l~iPvLDi~~~~-~~~~~~~-a~~R~~~a~r~~~~~YrQ~~L~~~~~~~~~-----------~~~~l~~rIrGWL~ 307 (310)
T PF12048_consen 241 QLAQLKIPVLDIYSAD-NPASQQT-AKQRKQAAKRNKKPDYRQIQLPGLPDNPSG-----------WQEQLLRRIRGWLK 307 (310)
T ss_pred HhhccCCCEEEEecCC-ChHHHHH-HHHHHHHHHhccCCCceeEecCCCCCChhh-----------HHHHHHHHHHHHHH
Confidence 3567889999999966 3221222 1222222 1222335667777776665422 23449999999998
Q ss_pred HH
Q 025842 241 KY 242 (247)
Q Consensus 241 ~~ 242 (247)
++
T Consensus 308 ~~ 309 (310)
T PF12048_consen 308 RH 309 (310)
T ss_pred hh
Confidence 65
No 137
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=98.91 E-value=2.7e-08 Score=80.20 Aligned_cols=113 Identities=16% Similarity=0.202 Sum_probs=65.0
Q ss_pred CCeEEEEEcCccCCC--c--------chHHHHH---HHHHhcCcEEEEeccC-C--CCCccCCCCcccchHHHHhhcCCc
Q 025842 42 SKSAILLISDVFGYE--A--------PLFRKLA---DKVAGAGFLVVAPDFF-Y--GDPIVDLNNPQFDREAWRKIHNTD 105 (247)
Q Consensus 42 ~~~~vv~~hgg~g~~--~--------~~~~~~a---~~la~~G~~v~~~d~~-~--g~~~~~~~~~~~~~~~~~~~~~~~ 105 (247)
....||++|+..|.. . .+|..+. +.+...-|-|++.|.. . |++. |......-..|. ..-+.
T Consensus 50 ~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStg--P~s~~p~g~~yg-~~FP~ 126 (368)
T COG2021 50 KDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTG--PSSINPGGKPYG-SDFPV 126 (368)
T ss_pred CCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCC--CCCcCCCCCccc-cCCCc
Confidence 356788888555521 1 1444433 2344446999999997 2 2222 333222211111 11122
Q ss_pred cccchHHHHHHHH-HhcCCCeEE-EEEecccHHHHHHhhcCC--CccEEEEecCCC
Q 025842 106 KGYVDAKSVIAAL-KSKGVSAIG-AAGFCWGGVVAAKLASSH--DIQAAVVLHPGA 157 (247)
Q Consensus 106 ~~~~d~~~~i~~l-~~~~~~~i~-l~G~S~Gg~~a~~~a~~~--~i~~~v~~~~~~ 157 (247)
-.+.|...+-+.+ ...+..++. ++|-||||+.++.++..+ .+..++.++...
T Consensus 127 ~ti~D~V~aq~~ll~~LGI~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~ 182 (368)
T COG2021 127 ITIRDMVRAQRLLLDALGIKKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAA 182 (368)
T ss_pred ccHHHHHHHHHHHHHhcCcceEeeeeccChHHHHHHHHHHhChHHHhhhheecccc
Confidence 2334444433434 445888888 899999999999988655 787777777654
No 138
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=98.85 E-value=6.2e-08 Score=75.95 Aligned_cols=184 Identities=17% Similarity=0.164 Sum_probs=108.9
Q ss_pred CCeEEEEEcCccCCCcchHHHHHHHHH-hcCc----EEEEeccCCCCCcc----CCC--Ccccch-HHHHhhcCCccccc
Q 025842 42 SKSAILLISDVFGYEAPLFRKLADKVA-GAGF----LVVAPDFFYGDPIV----DLN--NPQFDR-EAWRKIHNTDKGYV 109 (247)
Q Consensus 42 ~~~~vv~~hgg~g~~~~~~~~~a~~la-~~G~----~v~~~d~~~g~~~~----~~~--~~~~~~-~~~~~~~~~~~~~~ 109 (247)
...|+||+||+.| +...+..+++.+. +.|. .++.++- .|.-.. ... ++-..+ ..+-...+......
T Consensus 10 ~~tPTifihG~~g-t~~s~~~mi~~~~~~~~~~~~~l~v~V~~-~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~ 87 (255)
T PF06028_consen 10 STTPTIFIHGYGG-TANSFNHMINRLENKQGVAQKVLTVTVSK-NGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAK 87 (255)
T ss_dssp S-EEEEEE--TTG-GCCCCHHHHHHHHHCSTS-S-EEEEEEET-TSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHH
T ss_pred CCCcEEEECCCCC-ChhHHHHHHHHHHhhcCCCceEEEEEECC-CCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHH
Confidence 4678999996555 4567788999996 5542 2333332 332110 000 000000 00000011223346
Q ss_pred hHHHHHHHHHhc-CCCeEEEEEecccHHHHHHhhcC-------CCccEEEEecCCCCCcc--------------------
Q 025842 110 DAKSVIAALKSK-GVSAIGAAGFCWGGVVAAKLASS-------HDIQAAVVLHPGAITVD-------------------- 161 (247)
Q Consensus 110 d~~~~i~~l~~~-~~~~i~l~G~S~Gg~~a~~~a~~-------~~i~~~v~~~~~~~~~~-------------------- 161 (247)
-+..++.+|++. ...++-++||||||...+.++.. |.+..+|.+.+.+....
T Consensus 88 wl~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~~~~~~~~~~~~~~~gp~~~~ 167 (255)
T PF06028_consen 88 WLKKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGILGMNDDQNQNDLNKNGPKSMT 167 (255)
T ss_dssp HHHHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTTCCSC-TTTT-CSTT-BSS--
T ss_pred HHHHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCccccccccchhhhhcccCCcccC
Confidence 688889999887 78899999999999999987632 27889998887662210
Q ss_pred -------cc--cc--ccccEEEeecC------CCCCCCHHHHHHHHHHHHhccCCCeeEEEeCC--CCccccccCCCCCh
Q 025842 162 -------DI--NE--IKVPVAILGAE------IDHVSPPEDLKRFGEILSAKLKNDCLVKIYPR--VSHGWTVRYNVEDE 222 (247)
Q Consensus 162 -------~~--~~--~~~P~l~i~g~------~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~H~~~~~~~~~~~ 222 (247)
.. .. -...+|-|.|. .|-.||..++..+...+ +......+..++.| +.|+-...
T Consensus 168 ~~y~~l~~~~~~~~p~~i~VLnI~G~~~~g~~sDG~V~~~Ss~sl~~L~-~~~~~~Y~e~~v~G~~a~HS~Lhe------ 240 (255)
T PF06028_consen 168 PMYQDLLKNRRKNFPKNIQVLNIYGDLEDGSNSDGIVPNASSLSLRYLL-KNRAKSYQEKTVTGKDAQHSQLHE------ 240 (255)
T ss_dssp HHHHHHHHTHGGGSTTT-EEEEEEEESBTTCSBTSSSBHHHHCTHHHHC-TTTSSEEEEEEEESGGGSCCGGGC------
T ss_pred HHHHHHHHHHHhhCCCCeEEEEEecccCCCCCCCeEEeHHHHHHHHHHh-hcccCceEEEEEECCCCccccCCC------
Confidence 01 11 13469999998 78999999999998888 44444667777775 47865442
Q ss_pred HHHHHHHHHHHHHHHHH
Q 025842 223 FAVKSAEEAHEDMINWL 239 (247)
Q Consensus 223 ~~~~~~~~~~~~~~~fl 239 (247)
..++.+.|.+||
T Consensus 241 -----N~~V~~~I~~FL 252 (255)
T PF06028_consen 241 -----NPQVDKLIIQFL 252 (255)
T ss_dssp -----CHHHHHHHHHHH
T ss_pred -----CHHHHHHHHHHh
Confidence 357778888887
No 139
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=98.78 E-value=5.3e-07 Score=70.77 Aligned_cols=168 Identities=13% Similarity=0.069 Sum_probs=116.3
Q ss_pred EEEEEcCccCCCcchHHHHHHHHHhcCcEEEEeccC-CCCCccCCCCcccchHHHHhhcCCccccchHHHHHHHHHhcCC
Q 025842 45 AILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSKGV 123 (247)
Q Consensus 45 ~vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~ 123 (247)
|+|++-|+.|.........++.+.+.|+.++.+-.+ ...-. +. ......+..+++.+.+...
T Consensus 1 plvvl~gW~gA~~~hl~KY~~~Y~~~g~~il~~~~~~~~~~~--~~---------------~~~~~~~~~l~~~l~~~~~ 63 (240)
T PF05705_consen 1 PLVVLLGWMGAKPKHLAKYSDLYQDPGFDILLVTSPPADFFW--PS---------------KRLAPAADKLLELLSDSQS 63 (240)
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHhcCCeEEEEeCCHHHHee--ec---------------cchHHHHHHHHHHhhhhcc
Confidence 356666699987777777888888899999999874 11111 10 1111334455666665422
Q ss_pred ---CeEEEEEecccHHHHHHhhc------C---C---CccEEEEecCCC----------------CC-------------
Q 025842 124 ---SAIGAAGFCWGGVVAAKLAS------S---H---DIQAAVVLHPGA----------------IT------------- 159 (247)
Q Consensus 124 ---~~i~l~G~S~Gg~~a~~~a~------~---~---~i~~~v~~~~~~----------------~~------------- 159 (247)
.+|.+-.+|.||...+.... . . ++++.|.=+... ..
T Consensus 64 ~~~~~il~H~FSnGG~~~~~~l~~~~~~~~~~~~~~~~i~g~I~DS~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (240)
T PF05705_consen 64 ASPPPILFHSFSNGGSFLYSQLLEAYQSRKKFGKLLPRIKGIIFDSCPGIPTYSSSARAFSAALPKSSPRWFVPLWPLLQ 143 (240)
T ss_pred CCCCCEEEEEEECchHHHHHHHHHHHHhcccccccccccceeEEeCCCCccccccHHHHHHHHcCccchhhHHHHHHHHH
Confidence 38999999999888776321 1 1 478877644332 00
Q ss_pred ---------------------------ccccccccccEEEeecCCCCCCCHHHHHHHHHHHHhccCCCeeEEEeCCCCcc
Q 025842 160 ---------------------------VDDINEIKVPVAILGAEIDHVSPPEDLKRFGEILSAKLKNDCLVKIYPRVSHG 212 (247)
Q Consensus 160 ---------------------------~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~H~ 212 (247)
........+|-|.+++++|.+++.+..+++.+.. ++.|.+++...+++..|.
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~lylYS~~D~l~~~~~ve~~~~~~-~~~G~~V~~~~f~~S~HV 222 (240)
T PF05705_consen 144 FLLRLSIISYFIFGYPDVQEYYRRALNDFANSPSRCPRLYLYSKADPLIPWRDVEEHAEEA-RRKGWDVRAEKFEDSPHV 222 (240)
T ss_pred HHHHHHHHHHHHhcCCcHHHHHHHHHhhhhcCCCCCCeEEecCCCCcCcCHHHHHHHHHHH-HHcCCeEEEecCCCCchh
Confidence 0011234579999999999999999999999998 668888999999999998
Q ss_pred ccccCCCCChHHHHHHHHHHHHHHHHH
Q 025842 213 WTVRYNVEDEFAVKSAEEAHEDMINWL 239 (247)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~fl 239 (247)
-.... ..++.++.+.+|+
T Consensus 223 ~H~r~---------~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 223 AHLRK---------HPDRYWRAVDEFW 240 (240)
T ss_pred hhccc---------CHHHHHHHHHhhC
Confidence 66653 3578888888774
No 140
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.77 E-value=5.5e-07 Score=68.59 Aligned_cols=165 Identities=15% Similarity=0.115 Sum_probs=107.2
Q ss_pred CCCeEEEEEcCccCCCcchHHHHHHHHHhc-C--cEEEEeccC-CC-CCccCCCCcccchHHHHhhcCCccccchHHHHH
Q 025842 41 DSKSAILLISDVFGYEAPLFRKLADKVAGA-G--FLVVAPDFF-YG-DPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVI 115 (247)
Q Consensus 41 ~~~~~vv~~hgg~g~~~~~~~~~a~~la~~-G--~~v~~~d~~-~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i 115 (247)
..++.++++.|-.|. ...+.+++++|-.. + +.++.+... |- .+..-....+.. ....-...+.+..-+
T Consensus 27 ~~~~li~~IpGNPG~-~gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~------~~eifsL~~QV~HKl 99 (301)
T KOG3975|consen 27 EDKPLIVWIPGNPGL-LGFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHT------NEEIFSLQDQVDHKL 99 (301)
T ss_pred CCceEEEEecCCCCc-hhHHHHHHHHHHHhcccccceeEEeccccccCCcccccccccc------cccccchhhHHHHHH
Confidence 456778888866664 46788888877643 2 446666654 21 111000010000 111122235677788
Q ss_pred HHHHhc--CCCeEEEEEecccHHHHHHhhcC--C--CccEEEEecCCCC-------------------------------
Q 025842 116 AALKSK--GVSAIGAAGFCWGGVVAAKLASS--H--DIQAAVVLHPGAI------------------------------- 158 (247)
Q Consensus 116 ~~l~~~--~~~~i~l~G~S~Gg~~a~~~a~~--~--~i~~~v~~~~~~~------------------------------- 158 (247)
+++++. ...+|+++|||.|+++.+.+... . .+..++++.|..-
T Consensus 100 aFik~~~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTIerM~eSpnG~~~t~~l~~~~hv~~lt~yi~~~ 179 (301)
T KOG3975|consen 100 AFIKEYVPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTIERMHESPNGIRLTKVLRYLPHVVSLTSYIYWI 179 (301)
T ss_pred HHHHHhCCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchHHHHhcCCCceEeeeeeeeehhhhheeeeeeee
Confidence 888886 34699999999999999997742 2 7777888777650
Q ss_pred ------------------------------------------------------CccccccccccEEEeecCCCCCCCHH
Q 025842 159 ------------------------------------------------------TVDDINEIKVPVAILGAEIDHVSPPE 184 (247)
Q Consensus 159 ------------------------------------------------------~~~~~~~~~~P~l~i~g~~D~~~~~~ 184 (247)
..+..++-..-+.+.+|.+|..||.+
T Consensus 180 ~lp~~ir~~Li~~~l~~~n~p~e~l~tal~l~h~~v~rn~v~la~qEm~eV~~~d~e~~een~d~l~Fyygt~DgW~p~~ 259 (301)
T KOG3975|consen 180 LLPGFIRFILIKFMLCGSNGPQEFLSTALFLTHPQVVRNSVGLAAQEMEEVTTRDIEYCEENLDSLWFYYGTNDGWVPSH 259 (301)
T ss_pred cChHHHHHHHHHHhcccCCCcHHHHhhHHHhhcHHHHHHHhhhchHHHHHHHHhHHHHHHhcCcEEEEEccCCCCCcchH
Confidence 01112222456889999999999999
Q ss_pred HHHHHHHHHHhccCCCeeEEEeCCCCcccccc
Q 025842 185 DLKRFGEILSAKLKNDCLVKIYPRVSHGWTVR 216 (247)
Q Consensus 185 ~~~~~~~~l~~~~~~~~~~~~~~~~~H~~~~~ 216 (247)
..+.+.+.+++. +.++-+ ....|+|...
T Consensus 260 ~~d~~kdd~~ee---d~~Lde-dki~HAFV~~ 287 (301)
T KOG3975|consen 260 YYDYYKDDVPEE---DLKLDE-DKIPHAFVVK 287 (301)
T ss_pred HHHHHhhhcchh---ceeecc-ccCCcceeec
Confidence 999999988543 666767 6789999875
No 141
>COG0627 Predicted esterase [General function prediction only]
Probab=98.76 E-value=1.3e-07 Score=76.28 Aligned_cols=109 Identities=21% Similarity=0.188 Sum_probs=81.6
Q ss_pred eEEEEEecccHHHHHHhhcCC--CccEEEEecCCCCCc---------c---------------------------ccc--
Q 025842 125 AIGAAGFCWGGVVAAKLASSH--DIQAAVVLHPGAITV---------D---------------------------DIN-- 164 (247)
Q Consensus 125 ~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~~~~~~~---------~---------------------------~~~-- 164 (247)
+.+++||||||.-|+.+|..+ +++.+.+++|..... . .+.
T Consensus 153 ~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s~~~~~~~~~~~~~g~~~~~~~~G~~~~~~w~~~D~~~~~~~l 232 (316)
T COG0627 153 GRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSPSSPWGPTLAMGDPWGGKAFNAMLGPDSDPAWQENDPLSLIEKL 232 (316)
T ss_pred CceeEEEeccchhhhhhhhhCcchhceeccccccccccccccccccccccccCccHHHhcCCCccccccccCchhHHHHh
Confidence 899999999999999998655 788888777665221 0 011
Q ss_pred --c----------ccccEEEeecCCCCCCC--HHHHHHHHHHHHhccCCCeeEEEeCCCCccccccCCCCChHHHHHHHH
Q 025842 165 --E----------IKVPVAILGAEIDHVSP--PEDLKRFGEILSAKLKNDCLVKIYPRVSHGWTVRYNVEDEFAVKSAEE 230 (247)
Q Consensus 165 --~----------~~~P~l~i~g~~D~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~ 230 (247)
. ...++++-+|..|.+.. ....+.+.+++ .+.|.+..+...++..|.|.. ...
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~d~g~ad~~~~~~~~~~~~~~~a~-~~~g~~~~~~~~~~G~Hsw~~------------w~~ 299 (316)
T COG0627 233 VANANTRIWVYGGSPPELLIDNGPADFFLAANNLSTRAFAEAL-RAAGIPNGVRDQPGGDHSWYF------------WAS 299 (316)
T ss_pred hhcccccceecccCCCccccccccchhhhhhcccCHHHHHHHH-HhcCCCceeeeCCCCCcCHHH------------HHH
Confidence 1 33667777888887764 44467788888 667778888888888999854 588
Q ss_pred HHHHHHHHHHHHhccC
Q 025842 231 AHEDMINWLTKYVKRD 246 (247)
Q Consensus 231 ~~~~~~~fl~~~~~~~ 246 (247)
.++..+.|+.+.+...
T Consensus 300 ~l~~~~~~~a~~l~~~ 315 (316)
T COG0627 300 QLADHLPWLAGALGLA 315 (316)
T ss_pred HHHHHHHHHHHHhccC
Confidence 9999999999888653
No 142
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=98.74 E-value=4e-08 Score=82.01 Aligned_cols=123 Identities=15% Similarity=0.163 Sum_probs=78.5
Q ss_pred CceEEEeecC-CCCCCeEEEEEcCcc---CCCcchHHHHHHHHHhcC-cEEEEeccCCCC-CccCCCCcccchHHHHhhc
Q 025842 29 GLNTYVTGSG-PPDSKSAILLISDVF---GYEAPLFRKLADKVAGAG-FLVVAPDFFYGD-PIVDLNNPQFDREAWRKIH 102 (247)
Q Consensus 29 ~~~~~~~~p~-~~~~~~~vv~~hgg~---g~~~~~~~~~a~~la~~G-~~v~~~d~~~g~-~~~~~~~~~~~~~~~~~~~ 102 (247)
-+.+=++.|. +..+.|.+|+||||. |... ....-...|+++| +.|++++||-|. +...-..... ....
T Consensus 79 CL~LNIwaP~~~a~~~PVmV~IHGG~y~~Gs~s-~~~ydgs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~-----~~~~ 152 (491)
T COG2272 79 CLYLNIWAPEVPAEKLPVMVYIHGGGYIMGSGS-EPLYDGSALAARGDVVVVSVNYRLGALGFLDLSSLDT-----EDAF 152 (491)
T ss_pred ceeEEeeccCCCCCCCcEEEEEeccccccCCCc-ccccChHHHHhcCCEEEEEeCcccccceeeehhhccc-----cccc
Confidence 3445555555 455679999999754 2221 2123345788888 999999999332 1100000000 0000
Q ss_pred CCccccchHHHHHHHHHhc------CCCeEEEEEecccHHHHHHhhcCC----CccEEEEecCCC
Q 025842 103 NTDKGYVDAKSVIAALKSK------GVSAIGAAGFCWGGVVAAKLASSH----DIQAAVVLHPGA 157 (247)
Q Consensus 103 ~~~~~~~d~~~~i~~l~~~------~~~~i~l~G~S~Gg~~a~~~a~~~----~i~~~v~~~~~~ 157 (247)
...-...|...+++|++++ |++.|.|+|.|.||+.++.+...+ -+..+|+.||..
T Consensus 153 ~~n~Gl~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~P~AkGLF~rAi~~Sg~~ 217 (491)
T COG2272 153 ASNLGLLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAVPSAKGLFHRAIALSGAA 217 (491)
T ss_pred cccccHHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcCccchHHHHHHHHhCCCC
Confidence 0012347899999999987 678999999999999999876555 677777888776
No 143
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.74 E-value=4.7e-08 Score=74.80 Aligned_cols=89 Identities=18% Similarity=0.216 Sum_probs=54.2
Q ss_pred eEEEEEcCccCCCcchHHHHHHHHHhcCcE---EEEeccCCCCCccCCCCcccchHHHHhhcCCccccchHHHHHHHHHh
Q 025842 44 SAILLISDVFGYEAPLFRKLADKVAGAGFL---VVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKS 120 (247)
Q Consensus 44 ~~vv~~hgg~g~~~~~~~~~a~~la~~G~~---v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~ 120 (247)
.||||+||..+.....|..+++.|.++||. +++++| |... . .....+.. ...+....+.++|+.+++
T Consensus 2 ~PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~ty--g~~~--~----~~~~~~~~--~~~~~~~~l~~fI~~Vl~ 71 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYALTY--GSGN--G----SPSVQNAH--MSCESAKQLRAFIDAVLA 71 (219)
T ss_dssp --EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE----S-CC--H----HTHHHHHH--B-HHHHHHHHHHHHHHHH
T ss_pred CCEEEECCCCcchhhCHHHHHHHHHHcCCCcceeEeccC--CCCC--C----CCcccccc--cchhhHHHHHHHHHHHHH
Confidence 579999977665667888999999999999 799999 3322 0 00011111 111222668888888877
Q ss_pred c-CCCeEEEEEecccHHHHHHhhc
Q 025842 121 K-GVSAIGAAGFCWGGVVAAKLAS 143 (247)
Q Consensus 121 ~-~~~~i~l~G~S~Gg~~a~~~a~ 143 (247)
. +. +|-|+||||||.++-.+.+
T Consensus 72 ~TGa-kVDIVgHS~G~~iaR~yi~ 94 (219)
T PF01674_consen 72 YTGA-KVDIVGHSMGGTIARYYIK 94 (219)
T ss_dssp HHT---EEEEEETCHHHHHHHHHH
T ss_pred hhCC-EEEEEEcCCcCHHHHHHHH
Confidence 6 66 9999999999999888763
No 144
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=98.71 E-value=5.3e-07 Score=77.22 Aligned_cols=122 Identities=14% Similarity=0.062 Sum_probs=79.6
Q ss_pred EEeecCceEEEe--ecCCCCCCeEEEEEcCcc-C-C--CcchHHHHHH---HHHhcCcEEEEeccC-CCCCccCCCCccc
Q 025842 24 VQQLGGLNTYVT--GSGPPDSKSAILLISDVF-G-Y--EAPLFRKLAD---KVAGAGFLVVAPDFF-YGDPIVDLNNPQF 93 (247)
Q Consensus 24 ~~~~~~~~~~~~--~p~~~~~~~~vv~~hgg~-g-~--~~~~~~~~a~---~la~~G~~v~~~d~~-~g~~~~~~~~~~~ 93 (247)
+..-+|+.++.- +|...++.|.++...... . . .......... .++.+||+|+..|.| .+.|.+.-..
T Consensus 24 V~MRDGvrL~~dIy~Pa~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~SeG~~~~--- 100 (563)
T COG2936 24 VPMRDGVRLAADIYRPAGAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGGSEGVFDP--- 100 (563)
T ss_pred EEecCCeEEEEEEEccCCCCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccccCCcccce---
Confidence 334577655544 455556777777776111 1 1 1122333444 688999999999997 4444411110
Q ss_pred chHHHHhhcCCccccchHHHHHHHHHhcC--CCeEEEEEecccHHHHHHhhcC-C-CccEEEEecCCC
Q 025842 94 DREAWRKIHNTDKGYVDAKSVIAALKSKG--VSAIGAAGFCWGGVVAAKLASS-H-DIQAAVVLHPGA 157 (247)
Q Consensus 94 ~~~~~~~~~~~~~~~~d~~~~i~~l~~~~--~~~i~l~G~S~Gg~~a~~~a~~-~-~i~~~v~~~~~~ 157 (247)
+. . +..+|..+.|+|+.++. ..+|+++|.|++|...+.+|.. + -+++++...+..
T Consensus 101 ----~~---~--~E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~ 159 (563)
T COG2936 101 ----ES---S--REAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLV 159 (563)
T ss_pred ----ec---c--ccccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCchheeeccccccc
Confidence 11 1 24589999999999984 5699999999999999997744 3 788888766544
No 145
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=98.70 E-value=5.3e-07 Score=76.74 Aligned_cols=198 Identities=18% Similarity=0.234 Sum_probs=134.0
Q ss_pred cC--ceEEEeecC-CCCCCeEEEEEcCccCCC-cchHHHHHHHHHhcCcEEEEeccC-CCCCccCCCCcccchHHHH---
Q 025842 28 GG--LNTYVTGSG-PPDSKSAILLISDVFGYE-APLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWR--- 99 (247)
Q Consensus 28 ~~--~~~~~~~p~-~~~~~~~vv~~hgg~g~~-~~~~~~~a~~la~~G~~v~~~d~~-~g~~~~~~~~~~~~~~~~~--- 99 (247)
+| |+-++..-. ...+.|.+|+-.||+..+ ...+........++|..-+..+.| .|.=. ++|=
T Consensus 403 DGT~IPYFiv~K~~~~d~~pTll~aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIRGGGEfG----------p~WH~Aa 472 (648)
T COG1505 403 DGTRIPYFIVRKGAKKDENPTLLYAYGGFNISLTPRFSGSRKLWLERGGVFVLANIRGGGEFG----------PEWHQAG 472 (648)
T ss_pred CCccccEEEEecCCcCCCCceEEEeccccccccCCccchhhHHHHhcCCeEEEEecccCCccC----------HHHHHHH
Confidence 55 555555311 122578888888888732 233444446666999999999997 33211 1232
Q ss_pred hhcCCccccchHHHHHHHHHhcC---CCeEEEEEecccHHHHHHh-hcCC-CccEEEEecCCCC----------------
Q 025842 100 KIHNTDKGYVDAKSVIAALKSKG---VSAIGAAGFCWGGVVAAKL-ASSH-DIQAAVVLHPGAI---------------- 158 (247)
Q Consensus 100 ~~~~~~~~~~d~~~~i~~l~~~~---~~~i~l~G~S~Gg~~a~~~-a~~~-~i~~~v~~~~~~~---------------- 158 (247)
....-....+|..++.+.|.+++ ++++++.|-|.||.++-.+ ..++ .+.|+|+-.|..+
T Consensus 473 ~k~nrq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~evPllDMlRYh~l~aG~sW~~E 552 (648)
T COG1505 473 MKENKQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVPLLDMLRYHLLTAGSSWIAE 552 (648)
T ss_pred hhhcchhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccChhhhCceeeccchhhhhhhcccccchhhHhh
Confidence 12333556689999999999885 4799999999999987664 4666 6667776666541
Q ss_pred -----------------Ccccccc-c-cccEEEeecCCCCCCCHHHHHHHHHHHHhccCCCeeEEEeCCCCccccccCCC
Q 025842 159 -----------------TVDDINE-I-KVPVAILGAEIDHVSPPEDLKRFGEILSAKLKNDCLVKIYPRVSHGWTVRYNV 219 (247)
Q Consensus 159 -----------------~~~~~~~-~-~~P~l~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~H~~~~~~~~ 219 (247)
+..+++. . =+|+||-.+..|+-|.+..+.+|..+| ++.+.++-+.+-.++||+-..+..
T Consensus 553 YG~Pd~P~d~~~l~~YSPy~nl~~g~kYP~~LITTs~~DDRVHPaHarKfaa~L-~e~~~pv~~~e~t~gGH~g~~~~~- 630 (648)
T COG1505 553 YGNPDDPEDRAFLLAYSPYHNLKPGQKYPPTLITTSLHDDRVHPAHARKFAAKL-QEVGAPVLLREETKGGHGGAAPTA- 630 (648)
T ss_pred cCCCCCHHHHHHHHhcCchhcCCccccCCCeEEEcccccccccchHHHHHHHHH-HhcCCceEEEeecCCcccCCCChH-
Confidence 1122322 1 268999999999999999999999999 666667666666678998655422
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHhc
Q 025842 220 EDEFAVKSAEEAHEDMINWLTKYVK 244 (247)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~fl~~~~~ 244 (247)
........+..||.+.|+
T Consensus 631 -------~~A~~~a~~~afl~r~L~ 648 (648)
T COG1505 631 -------EIARELADLLAFLLRTLG 648 (648)
T ss_pred -------HHHHHHHHHHHHHHHhhC
Confidence 335667778888888763
No 146
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=98.68 E-value=2.9e-06 Score=69.74 Aligned_cols=107 Identities=12% Similarity=0.153 Sum_probs=86.8
Q ss_pred CCCeEEEEEecccHHHHHHhhc-CCCccEEEEecCCC-------------------------------------------
Q 025842 122 GVSAIGAAGFCWGGVVAAKLAS-SHDIQAAVVLHPGA------------------------------------------- 157 (247)
Q Consensus 122 ~~~~i~l~G~S~Gg~~a~~~a~-~~~i~~~v~~~~~~------------------------------------------- 157 (247)
..+++++.|.|-=|..++..|. +++|++++.+.-..
T Consensus 170 ~i~~FvV~GaSKRGWTtWltaa~D~RV~aivP~Vid~LN~~~~l~h~y~~yG~~ws~a~~dY~~~gi~~~l~tp~f~~L~ 249 (367)
T PF10142_consen 170 NIEKFVVTGASKRGWTTWLTAAVDPRVKAIVPIVIDVLNMKANLEHQYRSYGGNWSFAFQDYYNEGITQQLDTPEFDKLM 249 (367)
T ss_pred CccEEEEeCCchHhHHHHHhhccCcceeEEeeEEEccCCcHHHHHHHHHHhCCCCccchhhhhHhCchhhcCCHHHHHHH
Confidence 5689999999999999999875 55999998754222
Q ss_pred ---CCccccccccccEEEeecCCCCCCCHHHHHHHHHHHHhccCCCeeEEEeCCCCccccccCCCCChHHHHHHHHHHHH
Q 025842 158 ---ITVDDINEIKVPVAILGAEIDHVSPPEDLKRFGEILSAKLKNDCLVKIYPRVSHGWTVRYNVEDEFAVKSAEEAHED 234 (247)
Q Consensus 158 ---~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~ 234 (247)
++.....+++.|-+++.|..|+++.++....+++.|+. ++.+..+|+++|+... ..+...
T Consensus 250 ~ivDP~~Y~~rL~~PK~ii~atgDeFf~pD~~~~y~d~L~G----~K~lr~vPN~~H~~~~-------------~~~~~~ 312 (367)
T PF10142_consen 250 QIVDPYSYRDRLTMPKYIINATGDEFFVPDSSNFYYDKLPG----EKYLRYVPNAGHSLIG-------------SDVVQS 312 (367)
T ss_pred HhcCHHHHHHhcCccEEEEecCCCceeccCchHHHHhhCCC----CeeEEeCCCCCcccch-------------HHHHHH
Confidence 11224567899999999999999999999999999943 6789999999999744 578888
Q ss_pred HHHHHHHHhcc
Q 025842 235 MINWLTKYVKR 245 (247)
Q Consensus 235 ~~~fl~~~~~~ 245 (247)
+..|+.....+
T Consensus 313 l~~f~~~~~~~ 323 (367)
T PF10142_consen 313 LRAFYNRIQNG 323 (367)
T ss_pred HHHHHHHHHcC
Confidence 99999876544
No 147
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=98.66 E-value=2.7e-06 Score=66.06 Aligned_cols=107 Identities=9% Similarity=0.114 Sum_probs=67.4
Q ss_pred CCCeEEEEEecccHHHHHHhhcCC--CccEEEEecCCCCCcc--------ccccc-cccEEEeecCC--CC---CCC---
Q 025842 122 GVSAIGAAGFCWGGVVAAKLASSH--DIQAAVVLHPGAITVD--------DINEI-KVPVAILGAEI--DH---VSP--- 182 (247)
Q Consensus 122 ~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~~~~~~~~--------~~~~~-~~P~l~i~g~~--D~---~~~--- 182 (247)
+.++.+++|||+||.+++.+.... .+....+++|+..... ..... ..++.+.-|.. |. ...
T Consensus 135 ~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSlWw~n~~~l~~~~~~~~~~~~~i~l~iG~~e~~~~~~~~~~~~ 214 (264)
T COG2819 135 NSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSLWWHNEAILREIESLKLLKTKRICLYIGSGELDSSRSIRMAEN 214 (264)
T ss_pred CcccceeeeecchhHHHHHHHhcCcchhceeeeecchhhhCCHHHhccccccccCCCcceEEEecccccCcchhhhhhhH
Confidence 567899999999999999976443 8899999999883211 11111 34455555543 32 222
Q ss_pred HHHHHHHHHHHHhccCCCeeEEEeCCCCccccccCCCCChHHHHHHHHHHHHHHHHHHH
Q 025842 183 PEDLKRFGEILSAKLKNDCLVKIYPRVSHGWTVRYNVEDEFAVKSAEEAHEDMINWLTK 241 (247)
Q Consensus 183 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~ 241 (247)
.+.+.+..+.+....|....+..+++.+|+- .....+..++.|+..
T Consensus 215 ~~~~~~~~~~~~~~~g~~~~f~~~~~~~H~~-------------~~~~~~~~al~~l~~ 260 (264)
T COG2819 215 KQEAAELSSLLEKRTGARLVFQEEPLEHHGS-------------VIHASLPSALRFLDC 260 (264)
T ss_pred HHHHHHHHHHHhhccCCceEecccccccccc-------------hHHHHHHHHHHhhhc
Confidence 2333334444422256678888999888873 345666777777653
No 148
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=98.64 E-value=1.5e-07 Score=81.61 Aligned_cols=118 Identities=17% Similarity=0.147 Sum_probs=74.5
Q ss_pred cCceEEEeecCC---CCCCeEEEEEcCcc---CCCcchHHHHHHHHHhc--CcEEEEeccCCCC-CccCCCCcccchHHH
Q 025842 28 GGLNTYVTGSGP---PDSKSAILLISDVF---GYEAPLFRKLADKVAGA--GFLVVAPDFFYGD-PIVDLNNPQFDREAW 98 (247)
Q Consensus 28 ~~~~~~~~~p~~---~~~~~~vv~~hgg~---g~~~~~~~~~a~~la~~--G~~v~~~d~~~g~-~~~~~~~~~~~~~~~ 98 (247)
+-+.+-++.|.. ..+.|.||++|||. |... .. ....|+.+ |+.|++++||-|. +....... .
T Consensus 77 dcl~l~i~~p~~~~~~~~~pv~v~ihGG~~~~g~~~-~~--~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~-~----- 147 (493)
T cd00312 77 DCLYLNVYTPKNTKPGNSLPVMVWIHGGGFMFGSGS-LY--PGDGLAREGDNVIVVSINYRLGVLGFLSTGDI-E----- 147 (493)
T ss_pred cCCeEEEEeCCCCCCCCCCCEEEEEcCCccccCCCC-CC--ChHHHHhcCCCEEEEEecccccccccccCCCC-C-----
Confidence 345666665543 34568899999753 2221 11 23445544 3999999998222 21001100 0
Q ss_pred HhhcCCccccchHHHHHHHHHhc------CCCeEEEEEecccHHHHHHhhcCC----CccEEEEecCCC
Q 025842 99 RKIHNTDKGYVDAKSVIAALKSK------GVSAIGAAGFCWGGVVAAKLASSH----DIQAAVVLHPGA 157 (247)
Q Consensus 99 ~~~~~~~~~~~d~~~~i~~l~~~------~~~~i~l~G~S~Gg~~a~~~a~~~----~i~~~v~~~~~~ 157 (247)
........|..++++|++++ ++++|.++|+|.||.++..++..+ .++++|+.++..
T Consensus 148 ---~~~n~g~~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~ 213 (493)
T cd00312 148 ---LPGNYGLKDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSA 213 (493)
T ss_pred ---CCcchhHHHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCc
Confidence 01112247899999999986 578999999999999999877543 688888887765
No 149
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=98.64 E-value=1.8e-06 Score=66.06 Aligned_cols=184 Identities=14% Similarity=0.119 Sum_probs=109.1
Q ss_pred CeEEEEEcCccCCCcchHHHHHHHHHhcC-----cEEEEeccCCCCCc------cCCCCcccchHHHHhhcCCccccchH
Q 025842 43 KSAILLISDVFGYEAPLFRKLADKVAGAG-----FLVVAPDFFYGDPI------VDLNNPQFDREAWRKIHNTDKGYVDA 111 (247)
Q Consensus 43 ~~~vv~~hgg~g~~~~~~~~~a~~la~~G-----~~v~~~d~~~g~~~------~~~~~~~~~~~~~~~~~~~~~~~~d~ 111 (247)
.-|.||+| |+|++...+..+++.|...+ -.++.+|- .|.-. .+..++--.+.--..+.+......-+
T Consensus 45 ~iPTIfIh-GsgG~asS~~~Mv~ql~~~~~~~~e~Lt~~V~~-dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wl 122 (288)
T COG4814 45 AIPTIFIH-GSGGTASSLNGMVNQLLPDYKAGTESLTMTVDV-DGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWL 122 (288)
T ss_pred ccceEEEe-cCCCChhHHHHHHHHhhhcccccccceEEEEcC-CCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHH
Confidence 34789999 55556677888888887764 45555554 33200 00111100000000111222233567
Q ss_pred HHHHHHHHhc-CCCeEEEEEecccHHHHHHhhcC-------CCccEEEEecCCCC-----C--------cc---------
Q 025842 112 KSVIAALKSK-GVSAIGAAGFCWGGVVAAKLASS-------HDIQAAVVLHPGAI-----T--------VD--------- 161 (247)
Q Consensus 112 ~~~i~~l~~~-~~~~i~l~G~S~Gg~~a~~~a~~-------~~i~~~v~~~~~~~-----~--------~~--------- 161 (247)
+.++.+|+++ +..++-++||||||.....++.. |.+...|++.+.+. . .+
T Consensus 123 k~~msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN~~~l~~de~v~~v~~~~~~~~~t~y 202 (288)
T COG4814 123 KKAMSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFNVGNLVPDETVTDVLKDGPGLIKTPY 202 (288)
T ss_pred HHHHHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEecccccccccCCCcchheeeccCccccCcHH
Confidence 7889999987 77899999999999998887632 26777777666552 0 00
Q ss_pred ------ccc--cccccEEEeecCCC------CCCCHHHHHHHHHHHHhccCCCeeEEEeCC--CCccccccCCCCChHHH
Q 025842 162 ------DIN--EIKVPVAILGAEID------HVSPPEDLKRFGEILSAKLKNDCLVKIYPR--VSHGWTVRYNVEDEFAV 225 (247)
Q Consensus 162 ------~~~--~~~~P~l~i~g~~D------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~H~~~~~~~~~~~~~~ 225 (247)
... ....-+|+|.|+-| -.||...+...+..+ ...++..+..+|+| +.|.-...
T Consensus 203 ~~y~~~n~k~v~~~~evl~IaGDl~dg~~tDG~Vp~assls~~~lf-~~~~ksy~e~~~~Gk~a~Hs~lhe--------- 272 (288)
T COG4814 203 YDYIAKNYKKVSPNTEVLLIAGDLDDGKQTDGAVPWASSLSIYHLF-KKNGKSYIESLYKGKDARHSKLHE--------- 272 (288)
T ss_pred HHHHHhcceeCCCCcEEEEEecccccCCcCCCceechHhHHHHHHh-ccCcceeEEEeeeCCcchhhccCC---------
Confidence 011 11345999999854 457777777777777 44444555556765 45653332
Q ss_pred HHHHHHHHHHHHHHH
Q 025842 226 KSAEEAHEDMINWLT 240 (247)
Q Consensus 226 ~~~~~~~~~~~~fl~ 240 (247)
...+.+.+.+||-
T Consensus 273 --n~~v~~yv~~FLw 285 (288)
T COG4814 273 --NPTVAKYVKNFLW 285 (288)
T ss_pred --ChhHHHHHHHHhh
Confidence 2466777777764
No 150
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=98.64 E-value=2.6e-07 Score=71.52 Aligned_cols=101 Identities=18% Similarity=0.120 Sum_probs=59.8
Q ss_pred CCeEEEEEcCccCCCcchHHHHHHHHHh--------cCcEEEEeccCCCCCccCCCCcccchHHHHhhcCCccccchHHH
Q 025842 42 SKSAILLISDVFGYEAPLFRKLADKVAG--------AGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKS 113 (247)
Q Consensus 42 ~~~~vv~~hgg~g~~~~~~~~~a~~la~--------~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 113 (247)
.+.+|||+||..|. ...++.++..+.+ ..+.++++|+..-.+. .. +..+ .+..+-+..
T Consensus 3 ~g~pVlFIhG~~Gs-~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~---~~-g~~l---------~~q~~~~~~ 68 (225)
T PF07819_consen 3 SGIPVLFIHGNAGS-YKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSA---FH-GRTL---------QRQAEFLAE 68 (225)
T ss_pred CCCEEEEECcCCCC-HhHHHHHHHHHhhhhhhccCccceeEEEeccCccccc---cc-cccH---------HHHHHHHHH
Confidence 35789999965554 4556666655521 2588999998411111 00 0011 111133334
Q ss_pred HHHHHHhc------CCCeEEEEEecccHHHHHHhhcCC-----CccEEEEecCC
Q 025842 114 VIAALKSK------GVSAIGAAGFCWGGVVAAKLASSH-----DIQAAVVLHPG 156 (247)
Q Consensus 114 ~i~~l~~~------~~~~i~l~G~S~Gg~~a~~~a~~~-----~i~~~v~~~~~ 156 (247)
.++.+.+. +..+|+++||||||.++-.+...+ .++.+|.++..
T Consensus 69 ~i~~i~~~~~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tP 122 (225)
T PF07819_consen 69 AIKYILELYKSNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTP 122 (225)
T ss_pred HHHHHHHhhhhccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCC
Confidence 44444332 467999999999999998876332 68888876643
No 151
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=98.57 E-value=5e-06 Score=68.17 Aligned_cols=168 Identities=15% Similarity=0.117 Sum_probs=101.3
Q ss_pred CceEEEee-cCC--CCCCeEEEEEcCccC---CCcch---HHHHHHHHHhcCcEEEEeccCCCCCccCCCCcccchHHHH
Q 025842 29 GLNTYVTG-SGP--PDSKSAILLISDVFG---YEAPL---FRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWR 99 (247)
Q Consensus 29 ~~~~~~~~-p~~--~~~~~~vv~~hgg~g---~~~~~---~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~ 99 (247)
.-..|+.. |.. .+..|.||++|||.= ..... +..+...|. ...+++.||. -.+. ..
T Consensus 105 ~~s~Wlvk~P~~~~pk~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~--~~SILvLDYs-Lt~~---~~--------- 169 (374)
T PF10340_consen 105 SQSYWLVKAPNRFKPKSDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP--EVSILVLDYS-LTSS---DE--------- 169 (374)
T ss_pred cceEEEEeCCcccCCCCCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC--CCeEEEEecc-cccc---cc---------
Confidence 33467775 433 224688999995431 11111 122223332 4699999994 1110 00
Q ss_pred hhcCCccccchHHHHHHHHH-hcCCCeEEEEEecccHHHHHHhh---cC----CCccEEEEecCCCCC------------
Q 025842 100 KIHNTDKGYVDAKSVIAALK-SKGVSAIGAAGFCWGGVVAAKLA---SS----HDIQAAVVLHPGAIT------------ 159 (247)
Q Consensus 100 ~~~~~~~~~~d~~~~i~~l~-~~~~~~i~l~G~S~Gg~~a~~~a---~~----~~i~~~v~~~~~~~~------------ 159 (247)
....+..+..++.+..++|. +.+...|.++|-|.||.+++.+. .+ ...+.+|+++|+...
T Consensus 170 ~~~~yPtQL~qlv~~Y~~Lv~~~G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~~~~~~~~~~~~ 249 (374)
T PF10340_consen 170 HGHKYPTQLRQLVATYDYLVESEGNKNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLVPQDSQEGSSYH 249 (374)
T ss_pred CCCcCchHHHHHHHHHHHHHhccCCCeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCcCCCCCCCcccc
Confidence 11122333467778888888 56888999999999999999865 22 268999999999711
Q ss_pred -------------------------------------------ccccccc--cccEEEeecCCCCCCCHHHHHHHHHHHH
Q 025842 160 -------------------------------------------VDDINEI--KVPVAILGAEIDHVSPPEDLKRFGEILS 194 (247)
Q Consensus 160 -------------------------------------------~~~~~~~--~~P~l~i~g~~D~~~~~~~~~~~~~~l~ 194 (247)
.+...++ +.-+++++|+++-+. +..+++.+.+.
T Consensus 250 ~n~~~D~l~~~~~~~~~~~y~~~~~~~~~~~~~~~~n~~~n~d~~~W~~I~~~~~vfVi~Ge~Evfr--ddI~~~~~~~~ 327 (374)
T PF10340_consen 250 DNEKRDMLSYKGLSMFGDAYIGNNDPENDLNSLPFVNIEYNFDAEDWKDILKKYSVFVIYGEDEVFR--DDILEWAKKLN 327 (374)
T ss_pred ccccccccchhhHHHHHHhhccccccccccccCCccCcccCCChhHHHHhccCCcEEEEECCccccH--HHHHHHHHHHh
Confidence 0111111 235899999665543 66778888873
Q ss_pred hcc----CCCeeEEEeCCCCccc
Q 025842 195 AKL----KNDCLVKIYPRVSHGW 213 (247)
Q Consensus 195 ~~~----~~~~~~~~~~~~~H~~ 213 (247)
... +...++.+-+++.|.-
T Consensus 328 ~~~~~~~~~~~nv~~~~~G~Hi~ 350 (374)
T PF10340_consen 328 DVKPNKFSNSNNVYIDEGGIHIG 350 (374)
T ss_pred hcCccccCCcceEEEecCCcccc
Confidence 211 2245777888888864
No 152
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=98.55 E-value=1.8e-07 Score=81.85 Aligned_cols=118 Identities=13% Similarity=0.022 Sum_probs=69.6
Q ss_pred ceEEEeecCCCC---CCeEEEEEcCcc---CCCcchHHHHHHHHHhcCcEEEEeccCC---CCCccCCCCcccchHHHHh
Q 025842 30 LNTYVTGSGPPD---SKSAILLISDVF---GYEAPLFRKLADKVAGAGFLVVAPDFFY---GDPIVDLNNPQFDREAWRK 100 (247)
Q Consensus 30 ~~~~~~~p~~~~---~~~~vv~~hgg~---g~~~~~~~~~a~~la~~G~~v~~~d~~~---g~~~~~~~~~~~~~~~~~~ 100 (247)
+.+=++.|.... ..|++|++|||. |........-...+++++..||+++||- |.-. ....... ..+
T Consensus 109 L~LnI~~P~~~~~~~~lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~~Gfl~-~~~~~~~-~gN--- 183 (535)
T PF00135_consen 109 LYLNIYTPSNASSNSKLPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGAFGFLS-LGDLDAP-SGN--- 183 (535)
T ss_dssp -EEEEEEETSSSSTTSEEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HHHHH-B-SSSTTSH-BST---
T ss_pred HHHhhhhccccccccccceEEEeecccccCCCcccccccccccccCCCEEEEEeccccccccccc-ccccccC-chh---
Confidence 444445444433 358899999654 2221123344456678899999999982 3211 0111000 011
Q ss_pred hcCCccccchHHHHHHHHHhc------CCCeEEEEEecccHHHHHHhhc----CCCccEEEEecCCC
Q 025842 101 IHNTDKGYVDAKSVIAALKSK------GVSAIGAAGFCWGGVVAAKLAS----SHDIQAAVVLHPGA 157 (247)
Q Consensus 101 ~~~~~~~~~d~~~~i~~l~~~------~~~~i~l~G~S~Gg~~a~~~a~----~~~i~~~v~~~~~~ 157 (247)
....|...+++|++++ |+++|.|+|+|.||..+..+.. +.-+.++|+.++..
T Consensus 184 -----~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~ 245 (535)
T PF00135_consen 184 -----YGLLDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSA 245 (535)
T ss_dssp -----HHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--T
T ss_pred -----hhhhhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeecccccccccccccccccc
Confidence 1236889999999986 5689999999999999888653 23899999999865
No 153
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=98.52 E-value=5.2e-06 Score=69.92 Aligned_cols=51 Identities=18% Similarity=0.324 Sum_probs=36.8
Q ss_pred cccccccccEEEeecCCCCCCCHHHHHHHH-------HHHHhccCCCeeEEEeCCCCcc
Q 025842 161 DDINEIKVPVAILGAEIDHVSPPEDLKRFG-------EILSAKLKNDCLVKIYPRVSHG 212 (247)
Q Consensus 161 ~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~-------~~l~~~~~~~~~~~~~~~~~H~ 212 (247)
-++++|++|++++++..|.++|++.+..+. +.+ ...|-.+-+.+-+..||.
T Consensus 291 ~DLr~Ir~Piivfas~gDnITPP~QaL~WI~dlY~~~~ei-~a~gQ~IVY~~h~~vGHL 348 (581)
T PF11339_consen 291 VDLRNIRSPIIVFASYGDNITPPQQALNWIPDLYPDTEEI-KAAGQTIVYLLHESVGHL 348 (581)
T ss_pred eehhhCCCCEEEEeccCCCCCChhHhccchHhhcCCHHHH-HhCCCEEEEEecCCCCce
Confidence 378999999999999999999999885432 223 223334455566778994
No 154
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=98.50 E-value=1.4e-06 Score=75.15 Aligned_cols=165 Identities=19% Similarity=0.190 Sum_probs=108.3
Q ss_pred CCCCeEEEEEcCccCCCc-chHHHHHHHHHhcCcEEEEeccCCCCCccCCCCcccchHHHHhhc---CCccccchHHHHH
Q 025842 40 PDSKSAILLISDVFGYEA-PLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIH---NTDKGYVDAKSVI 115 (247)
Q Consensus 40 ~~~~~~vv~~hgg~g~~~-~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~---~~~~~~~d~~~~i 115 (247)
+++.|.+|+-.|.+|.+- ..+....-.|.++||.-.+...|.|. . .. ..|...- .=.....|..++.
T Consensus 445 ~g~~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGGg-e--lG------~~WYe~GK~l~K~NTf~DFIa~a 515 (682)
T COG1770 445 DGSAPLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGGG-E--LG------RAWYEDGKLLNKKNTFTDFIAAA 515 (682)
T ss_pred CCCCcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeeccc-c--cC------hHHHHhhhhhhccccHHHHHHHH
Confidence 456788888888888432 23333444677999999999997332 1 11 1233221 1144557888999
Q ss_pred HHHHhcC---CCeEEEEEecccHHHHHHhh-cCC-CccEEEEecCCCCC-------------------------------
Q 025842 116 AALKSKG---VSAIGAAGFCWGGVVAAKLA-SSH-DIQAAVVLHPGAIT------------------------------- 159 (247)
Q Consensus 116 ~~l~~~~---~~~i~l~G~S~Gg~~a~~~a-~~~-~i~~~v~~~~~~~~------------------------------- 159 (247)
++|.+.+ .++|+++|-|.||++.-.++ ..+ .++++|+..|..+.
T Consensus 516 ~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVDvltTMlD~slPLT~~E~~EWGNP~d~e~y~yi 595 (682)
T COG1770 516 RHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVDVLTTMLDPSLPLTVTEWDEWGNPLDPEYYDYI 595 (682)
T ss_pred HHHHHcCcCCccceEEeccCchhHHHHHHHhhChhhhhheeecCCccchhhhhcCCCCCCCccchhhhCCcCCHHHHHHH
Confidence 9998874 57999999999999988877 444 88888887776521
Q ss_pred -----ccccccc-cccEEEeecCCCCCCCHHHHHHHHHHHHhccCC---CeeEEEeCCCCcccc
Q 025842 160 -----VDDINEI-KVPVAILGAEIDHVSPPEDLKRFGEILSAKLKN---DCLVKIYPRVSHGWT 214 (247)
Q Consensus 160 -----~~~~~~~-~~P~l~i~g~~D~~~~~~~~~~~~~~l~~~~~~---~~~~~~~~~~~H~~~ 214 (247)
-+++..- -+|+|++.|..|+-|..-.-.++..+| +..+. +.-+..-=++||+-.
T Consensus 596 kSYSPYdNV~a~~YP~ilv~~Gl~D~rV~YwEpAKWvAkL-R~~~td~~plLlkt~M~aGHgG~ 658 (682)
T COG1770 596 KSYSPYDNVEAQPYPAILVTTGLNDPRVQYWEPAKWVAKL-RELKTDGNPLLLKTNMDAGHGGA 658 (682)
T ss_pred hhcCchhccccCCCCceEEEccccCCccccchHHHHHHHH-hhcccCCCcEEEEecccccCCCC
Confidence 1223222 257999999999999877766766666 33322 333444235799643
No 155
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=98.41 E-value=9.8e-06 Score=65.02 Aligned_cols=139 Identities=15% Similarity=0.125 Sum_probs=84.0
Q ss_pred EEeecC--ceEEEeecCCCCCCeEEEEEcCccCCCcch--H----HHHHHHHH-hcCcEEEEeccC-CCCCccCCCCccc
Q 025842 24 VQQLGG--LNTYVTGSGPPDSKSAILLISDVFGYEAPL--F----RKLADKVA-GAGFLVVAPDFF-YGDPIVDLNNPQF 93 (247)
Q Consensus 24 ~~~~~~--~~~~~~~p~~~~~~~~vv~~hgg~g~~~~~--~----~~~a~~la-~~G~~v~~~d~~-~g~~~~~~~~~~~ 93 (247)
..+.++ ++......+...+...||++-| .|..-+. + ......++ ..|-+|++++|| -|.|.+.+
T Consensus 116 ~Iq~D~~~IDt~~I~~~~a~~~RWiL~s~G-Ng~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~~----- 189 (365)
T PF05677_consen 116 PIQYDGVKIDTMAIHQPEAKPQRWILVSNG-NGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTGPP----- 189 (365)
T ss_pred EEeeCCEEEEEEEeeCCCCCCCcEEEEEcC-ChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCCCC-----
Confidence 345555 3333332122345677888884 4422222 1 01122333 458999999998 56554112
Q ss_pred chHHHHhhcCCccccchHHHHHHHHHhc----CCCeEEEEEecccHHHHHHhhcCC------CccEEEEecCCC------
Q 025842 94 DREAWRKIHNTDKGYVDAKSVIAALKSK----GVSAIGAAGFCWGGVVAAKLASSH------DIQAAVVLHPGA------ 157 (247)
Q Consensus 94 ~~~~~~~~~~~~~~~~d~~~~i~~l~~~----~~~~i~l~G~S~Gg~~a~~~a~~~------~i~~~v~~~~~~------ 157 (247)
+.+..+.|-.+.++||++. ..++|++.|||+||.++..+..++ .++-++.-+-.+
T Consensus 190 ---------s~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~~~~~~dgi~~~~ikDRsfssl~~v 260 (365)
T PF05677_consen 190 ---------SRKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKEVLKGSDGIRWFLIKDRSFSSLAAV 260 (365)
T ss_pred ---------CHHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhcccccCCCeeEEEEecCCcchHHHH
Confidence 1123347888999999863 347999999999999988766443 355444433222
Q ss_pred --------------------CCccccccccccEEEeecCC
Q 025842 158 --------------------ITVDDINEIKVPVAILGAEI 177 (247)
Q Consensus 158 --------------------~~~~~~~~~~~P~l~i~g~~ 177 (247)
.+.+..+++.||=+++++.+
T Consensus 261 as~~~~~~~~~l~~l~gWnidS~K~s~~l~cpeIii~~~d 300 (365)
T PF05677_consen 261 ASQFFGPIGKLLIKLLGWNIDSAKNSEKLQCPEIIIYGVD 300 (365)
T ss_pred HHHHHHHHHHHHHHHhccCCCchhhhccCCCCeEEEeccc
Confidence 23445677889999999863
No 156
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=98.39 E-value=2.4e-05 Score=61.76 Aligned_cols=172 Identities=15% Similarity=0.142 Sum_probs=98.1
Q ss_pred cCceEEEeecCCC---CCCeEEEEEcCccCCCcchHHHHHHHHHhc----CcEEEEeccCCCCCccCCCCcccchHHHHh
Q 025842 28 GGLNTYVTGSGPP---DSKSAILLISDVFGYEAPLFRKLADKVAGA----GFLVVAPDFFYGDPIVDLNNPQFDREAWRK 100 (247)
Q Consensus 28 ~~~~~~~~~p~~~---~~~~~vv~~hgg~g~~~~~~~~~a~~la~~----G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~ 100 (247)
+....+++.|+.. .+.|.+++++|-.-......-.+.+.|... .-.++.+|+- ... . + +..
T Consensus 80 ~~~~~vv~lppgy~~~~k~pvl~~~DG~~~~~~g~i~~~~dsli~~g~i~pai~vgid~~--d~~----~---R---~~~ 147 (299)
T COG2382 80 SERRRVVYLPPGYNPLEKYPVLYLQDGQDWFRSGRIPRILDSLIAAGEIPPAILVGIDYI--DVK----K---R---REE 147 (299)
T ss_pred cceeEEEEeCCCCCccccccEEEEeccHHHHhcCChHHHHHHHHHcCCCCCceEEecCCC--CHH----H---H---HHH
Confidence 4466666665442 245667777743222223333455555554 4778888872 100 0 0 000
Q ss_pred hcCCcc-ccchHHHHHHHHHhc-----CCCeEEEEEecccHHHHHHhhcCC--CccEEEEecCCCCCcc-----------
Q 025842 101 IHNTDK-GYVDAKSVIAALKSK-----GVSAIGAAGFCWGGVVAAKLASSH--DIQAAVVLHPGAITVD----------- 161 (247)
Q Consensus 101 ~~~~~~-~~~d~~~~i~~l~~~-----~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~~~~~~~~----------- 161 (247)
....+. ...-..+++=++++. ..+.-+|+|.|+||.+++.++.++ .|..+++.||+.....
T Consensus 148 ~~~n~~~~~~L~~eLlP~v~~~yp~~~~a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~~~~~~~~~~~~~~~ 227 (299)
T COG2382 148 LHCNEAYWRFLAQELLPYVEERYPTSADADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFWWTPLDTQPQGEVAE 227 (299)
T ss_pred hcccHHHHHHHHHHhhhhhhccCcccccCCCcEEeccccccHHHHHHHhcCchhhceeeccCCccccCccccccccchhh
Confidence 000000 112244555566654 345778999999999999999776 8888999998874320
Q ss_pred ---ccccc---cccEEEeecCCCCCCCHHHHHHHHHHHHhccCCCeeEEEeCCCCccccc
Q 025842 162 ---DINEI---KVPVAILGAEIDHVSPPEDLKRFGEILSAKLKNDCLVKIYPRVSHGWTV 215 (247)
Q Consensus 162 ---~~~~~---~~P~l~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~H~~~~ 215 (247)
....+ ..-++...++.+.++ ...+.+.+.+ .+.|.+..+.+|+| ||.+..
T Consensus 228 ~l~~~~a~~~~~~~~l~~g~~~~~~~--~pNr~L~~~L-~~~g~~~~yre~~G-gHdw~~ 283 (299)
T COG2382 228 SLKILHAIGTDERIVLTTGGEEGDFL--RPNRALAAQL-EKKGIPYYYREYPG-GHDWAW 283 (299)
T ss_pred hhhhhhccCccceEEeecCCcccccc--chhHHHHHHH-HhcCCcceeeecCC-CCchhH
Confidence 01111 121222233334444 3456788888 66788999999998 998744
No 157
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.37 E-value=1e-06 Score=71.96 Aligned_cols=107 Identities=18% Similarity=0.170 Sum_probs=63.0
Q ss_pred CCeEEEEEcCccCCC--cchHHHHHHHHHh---cCcEEEEeccCCCCCccCCCCcccchHHHHhhcCCccccchHHHHHH
Q 025842 42 SKSAILLISDVFGYE--APLFRKLADKVAG---AGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIA 116 (247)
Q Consensus 42 ~~~~vv~~hgg~g~~--~~~~~~~a~~la~---~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~ 116 (247)
.+|.+|++||+.+.. ..+...+.+.|-. ..+.|+++|+..+ .. .. +. ............+..+|+
T Consensus 70 ~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~-a~--~~-----Y~--~a~~n~~~vg~~la~~l~ 139 (331)
T PF00151_consen 70 SKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRG-AS--NN-----YP--QAVANTRLVGRQLAKFLS 139 (331)
T ss_dssp TSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHH-HS--S------HH--HHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhh-cc--cc-----cc--chhhhHHHHHHHHHHHHH
Confidence 578999999777654 3455566665544 4899999999411 11 10 10 011111222345566667
Q ss_pred HHHh---cCCCeEEEEEecccHHHHHHhhcC--C--CccEEEEecCCCC
Q 025842 117 ALKS---KGVSAIGAAGFCWGGVVAAKLASS--H--DIQAAVVLHPGAI 158 (247)
Q Consensus 117 ~l~~---~~~~~i~l~G~S~Gg~~a~~~a~~--~--~i~~~v~~~~~~~ 158 (247)
.|.. .+.++|.++|||+||.+|-.+++. . +|..+..+.|...
T Consensus 140 ~L~~~~g~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP 188 (331)
T PF00151_consen 140 FLINNFGVPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGP 188 (331)
T ss_dssp HHHHHH---GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-T
T ss_pred HHHhhcCCChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCcccc
Confidence 7663 257899999999999999998732 3 7999999998764
No 158
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=98.36 E-value=2.8e-05 Score=62.38 Aligned_cols=201 Identities=19% Similarity=0.090 Sum_probs=116.6
Q ss_pred ceEEEeecCCC---CCCeEEEEEcCccCCCcchHHHHHHHHHhcCcEEEEeccC---------CCCCccCCCCcccchHH
Q 025842 30 LNTYVTGSGPP---DSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF---------YGDPIVDLNNPQFDREA 97 (247)
Q Consensus 30 ~~~~~~~p~~~---~~~~~vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~~---------~g~~~~~~~~~~~~~~~ 97 (247)
+.+.+..|... .+.|.+++.|+..+. .......+..++..++.++..+.. +|... ..........
T Consensus 33 ~~~~l~~p~~~~~~~~~p~v~~~h~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~ 109 (299)
T COG1073 33 LAAVLHLPPSGNEEKKLPAVVFLHGFGSS-KEQSLGYAVLLAEKGYRVLAGDASLFGESGGDPRGLAD--SEGYAEDFSA 109 (299)
T ss_pred eeeEEEecCCCCccccCceEEeccCcccc-ccCcchHHHHhhhceeEEeeeccccccccccccccccC--ccccccccch
Confidence 45556655443 457888999954443 344334788898999998888751 22211 1110001000
Q ss_pred H-----------------Hh---hcCCccccchHHHHHHHHHhc----CCCeEEEEEecccHHHHHHhhcC------CCc
Q 025842 98 W-----------------RK---IHNTDKGYVDAKSVIAALKSK----GVSAIGAAGFCWGGVVAAKLASS------HDI 147 (247)
Q Consensus 98 ~-----------------~~---~~~~~~~~~d~~~~i~~l~~~----~~~~i~l~G~S~Gg~~a~~~a~~------~~i 147 (247)
. .. .........+...+..++... ...++.++|.|+||..++..... ..+
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~g~~~~~~~~~~~~~~~~~~~ 189 (299)
T COG1073 110 AVLLLLSEGVLDKDYRLLGASLGPRILAGLSLGGPSAGALLAWGPTRLDASRIVVWGESLGGALALLLLGANPELARELI 189 (299)
T ss_pred hheeeeccccccHHHHHHhhhcCcceEEEEEeeccchHHHhhcchhHHHhhcccceeeccCceeeccccccchHHHHhhh
Confidence 0 00 001111222333444444433 24588899999999888874321 011
Q ss_pred cEEEE-------------ecC---------CCCCcccccccc-ccEEEeecCCCCCCCHHHHHHHHHHHHhccCCCeeEE
Q 025842 148 QAAVV-------------LHP---------GAITVDDINEIK-VPVAILGAEIDHVSPPEDLKRFGEILSAKLKNDCLVK 204 (247)
Q Consensus 148 ~~~v~-------------~~~---------~~~~~~~~~~~~-~P~l~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~ 204 (247)
..++. +.. .......+..+. .|+|+++|.+|..+|......+++... .. +.+..
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~-~~--~~~~~ 266 (299)
T COG1073 190 DYLITPGGFAPLPAPEAPLDTLPLRAVLLLLLDPFDDAEKISPRPVLLVHGERDEVVPLRDAEDLYEAAR-ER--PKKLL 266 (299)
T ss_pred hhhccCCCCCCCCcccccccccccchhhhccCcchhhHhhcCCcceEEEecCCCcccchhhhHHHHhhhc-cC--CceEE
Confidence 11110 000 001122334455 699999999999999999999999873 22 56788
Q ss_pred EeCCCCccccccCCCCChHHHHHHHHHHHHHHHHHHHHh
Q 025842 205 IYPRVSHGWTVRYNVEDEFAVKSAEEAHEDMINWLTKYV 243 (247)
Q Consensus 205 ~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~ 243 (247)
.+++++|........ ..++.+.++.+||.+++
T Consensus 267 ~~~~~~H~~~~~~~~-------~~~~~~~~~~~f~~~~l 298 (299)
T COG1073 267 FVPGGGHIDLYDNPP-------AVEQALDKLAEFLERHL 298 (299)
T ss_pred EecCCccccccCccH-------HHHHHHHHHHHHHHHhc
Confidence 888899987653221 34689999999999876
No 159
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.35 E-value=1.3e-05 Score=62.43 Aligned_cols=130 Identities=12% Similarity=0.140 Sum_probs=82.1
Q ss_pred CCCeEEEEEcCccCCC-cchHHHHHHHHHhcCc--EEEEeccC-CCCCccCCCCcccchHHHHhhcCCccccchHHHHHH
Q 025842 41 DSKSAILLISDVFGYE-APLFRKLADKVAGAGF--LVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIA 116 (247)
Q Consensus 41 ~~~~~vv~~hgg~g~~-~~~~~~~a~~la~~G~--~v~~~d~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~ 116 (247)
..+..+||+| |+..+ .......++.....+| .++.+.++ .|... ... ............+..+++
T Consensus 16 ~~~~vlvfVH-Gyn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~-~Y~---------~d~~~a~~s~~~l~~~L~ 84 (233)
T PF05990_consen 16 PDKEVLVFVH-GYNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLL-GYF---------YDRESARFSGPALARFLR 84 (233)
T ss_pred CCCeEEEEEe-CCCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChh-hhh---------hhhhhHHHHHHHHHHHHH
Confidence 4567899999 55543 3334445544444444 68888886 33321 000 001111222356777777
Q ss_pred HHHhc-CCCeEEEEEecccHHHHHHhhc----C-------CCccEEEEecCCCCCcc------ccccccccEEEeecCCC
Q 025842 117 ALKSK-GVSAIGAAGFCWGGVVAAKLAS----S-------HDIQAAVVLHPGAITVD------DINEIKVPVAILGAEID 178 (247)
Q Consensus 117 ~l~~~-~~~~i~l~G~S~Gg~~a~~~a~----~-------~~i~~~v~~~~~~~~~~------~~~~~~~P~l~i~g~~D 178 (247)
.|.+. +..+|.+++||||+.+.+.+.. . ..+..+++..|...... .+.+...++.+.+..+|
T Consensus 85 ~L~~~~~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~d~f~~~~~~~~~~~~~itvy~s~~D 164 (233)
T PF05990_consen 85 DLARAPGIKRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDNDVFRSQLPDLGSSARRITVYYSRND 164 (233)
T ss_pred HHHhccCCceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCHHHHHHHHHHHhhcCCCEEEEEcCCc
Confidence 77776 6789999999999999887541 1 16788999998875421 24445678999999999
Q ss_pred CCC
Q 025842 179 HVS 181 (247)
Q Consensus 179 ~~~ 181 (247)
...
T Consensus 165 ~AL 167 (233)
T PF05990_consen 165 RAL 167 (233)
T ss_pred hHH
Confidence 855
No 160
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=98.35 E-value=0.00014 Score=60.10 Aligned_cols=106 Identities=21% Similarity=0.217 Sum_probs=72.0
Q ss_pred hHHHHHHHHHhc---CC--CeEEEEEecccHHHHHHhhc-CC-CccEEEEecCCCCC-----------------------
Q 025842 110 DAKSVIAALKSK---GV--SAIGAAGFCWGGVVAAKLAS-SH-DIQAAVVLHPGAIT----------------------- 159 (247)
Q Consensus 110 d~~~~i~~l~~~---~~--~~i~l~G~S~Gg~~a~~~a~-~~-~i~~~v~~~~~~~~----------------------- 159 (247)
|...++.++.+. .. -|++++|+|.||+++..+|+ .| -+.+++--+++..+
T Consensus 165 D~INAl~~l~k~~~~~~~~lp~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~~p~l~~I~Gre~~~~~y~~~~~~~~ 244 (403)
T PF11144_consen 165 DIINALLDLKKIFPKNGGGLPKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYALPPLRYIFGREIDFMKYICSGEFFN 244 (403)
T ss_pred HHHHHHHHHHHhhhcccCCCcEEEEecCcHHHHHHHHHhhCccceeEEEecCccccchhheeeeeecCcccccccccccc
Confidence 455555555554 22 49999999999999999884 34 56665554444300
Q ss_pred ------------------------------------cccc---cc--ccccEEEeecCCCCCCCHHHHHHHHHHHHhccC
Q 025842 160 ------------------------------------VDDI---NE--IKVPVAILGAEIDHVSPPEDLKRFGEILSAKLK 198 (247)
Q Consensus 160 ------------------------------------~~~~---~~--~~~P~l~i~g~~D~~~~~~~~~~~~~~l~~~~~ 198 (247)
.+.+ .. -++=.+..|+..|+..|.+.-+++++.+ .+.|
T Consensus 245 ~~~~~i~~~~Kt~Wt~n~~S~~~Fs~~~~~IR~iLn~~HL~iqs~~n~~~~yvsYHs~~D~~~p~~~K~~l~~~l-~~lg 323 (403)
T PF11144_consen 245 FKNIRIYCFDKTFWTRNKNSPYYFSKARYIIRSILNPDHLKIQSNYNKKIIYVSYHSIKDDLAPAEDKEELYEIL-KNLG 323 (403)
T ss_pred cCCEEEEEEeccccccCCCCccccChHHHHHHHhcChHHHHHHHhcccceEEEEEeccCCCCCCHHHHHHHHHHH-HHcC
Confidence 0011 11 1234677899999999999999999999 7788
Q ss_pred CCeeEEEe-----------CCCCcccccc
Q 025842 199 NDCLVKIY-----------PRVSHGWTVR 216 (247)
Q Consensus 199 ~~~~~~~~-----------~~~~H~~~~~ 216 (247)
-+++++.+ .+..|+...+
T Consensus 324 fda~l~lIkdes~iDGkfIKnl~HGmgis 352 (403)
T PF11144_consen 324 FDATLHLIKDESEIDGKFIKNLEHGMGIS 352 (403)
T ss_pred CCeEEEEecChhhccchheeccccCCCCC
Confidence 88899888 3346776553
No 161
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.34 E-value=3.6e-06 Score=71.24 Aligned_cols=87 Identities=10% Similarity=0.177 Sum_probs=61.2
Q ss_pred cchHHHHHHHHHhcCcEEEEeccC-CCCCccCCCCcccchHHHHhhcCCccccchHHHHHHHHHhc-CCCeEEEEEeccc
Q 025842 57 APLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSK-GVSAIGAAGFCWG 134 (247)
Q Consensus 57 ~~~~~~~a~~la~~G~~v~~~d~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~-~~~~i~l~G~S~G 134 (247)
...|..+++.|++.||.+ ..|++ .|..+ ... ... +...+++.+.++.+.+. +..++.++|||||
T Consensus 107 ~~~~~~li~~L~~~GY~~-~~dL~g~gYDw-R~~---~~~---------~~~~~~Lk~lIe~~~~~~g~~kV~LVGHSMG 172 (440)
T PLN02733 107 VYYFHDMIEQLIKWGYKE-GKTLFGFGYDF-RQS---NRL---------PETMDGLKKKLETVYKASGGKKVNIISHSMG 172 (440)
T ss_pred HHHHHHHHHHHHHcCCcc-CCCcccCCCCc-ccc---ccH---------HHHHHHHHHHHHHHHHHcCCCCEEEEEECHh
Confidence 456788999999999876 77886 55544 111 111 12236677777776654 6679999999999
Q ss_pred HHHHHHhhcC-C-----CccEEEEecCCC
Q 025842 135 GVVAAKLASS-H-----DIQAAVVLHPGA 157 (247)
Q Consensus 135 g~~a~~~a~~-~-----~i~~~v~~~~~~ 157 (247)
|.++..++.. + -|+.+|.+++..
T Consensus 173 Glva~~fl~~~p~~~~k~I~~~I~la~P~ 201 (440)
T PLN02733 173 GLLVKCFMSLHSDVFEKYVNSWIAIAAPF 201 (440)
T ss_pred HHHHHHHHHHCCHhHHhHhccEEEECCCC
Confidence 9999986643 2 478888887655
No 162
>COG3150 Predicted esterase [General function prediction only]
Probab=98.32 E-value=1.3e-05 Score=57.62 Aligned_cols=103 Identities=18% Similarity=0.191 Sum_probs=66.9
Q ss_pred HHHhcCCCeEEEEEecccHHHHHHhhcCCCccEEEEecCCCCC-------------------------------cccccc
Q 025842 117 ALKSKGVSAIGAAGFCWGGVVAAKLASSHDIQAAVVLHPGAIT-------------------------------VDDINE 165 (247)
Q Consensus 117 ~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~~i~~~v~~~~~~~~-------------------------------~~~~~~ 165 (247)
.+.+.+...+.++|-|+||+.|-.++....+++++ ++|...+ ...++.
T Consensus 52 ~i~~~~~~~p~ivGssLGGY~At~l~~~~Girav~-~NPav~P~e~l~gylg~~en~ytg~~y~le~~hI~~l~~~~~~~ 130 (191)
T COG3150 52 AVQELGDESPLIVGSSLGGYYATWLGFLCGIRAVV-FNPAVRPYELLTGYLGRPENPYTGQEYVLESRHIATLCVLQFRE 130 (191)
T ss_pred HHHHcCCCCceEEeecchHHHHHHHHHHhCChhhh-cCCCcCchhhhhhhcCCCCCCCCcceEEeehhhHHHHHHhhccc
Confidence 33334555699999999999999999998888655 4554411 112344
Q ss_pred cccc-EEEeec-CCCCCCCHHHHHHHHHHHHhccCCCeeEEEeCCCCccccccCCCCChHHHHHHHHHHHHHHHHHH
Q 025842 166 IKVP-VAILGA-EIDHVSPPEDLKRFGEILSAKLKNDCLVKIYPRVSHGWTVRYNVEDEFAVKSAEEAHEDMINWLT 240 (247)
Q Consensus 166 ~~~P-~l~i~g-~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~ 240 (247)
++.| .+.+-. +.|.+.+...+...+.. +...+.+|..|.|.. .....+.|+.|..
T Consensus 131 l~~p~~~~lL~qtgDEvLDyr~a~a~y~~--------~~~~V~dgg~H~F~~------------f~~~l~~i~aF~g 187 (191)
T COG3150 131 LNRPRCLVLLSQTGDEVLDYRQAVAYYHP--------CYEIVWDGGDHKFKG------------FSRHLQRIKAFKG 187 (191)
T ss_pred cCCCcEEEeecccccHHHHHHHHHHHhhh--------hhheeecCCCccccc------------hHHhHHHHHHHhc
Confidence 4444 333333 34887776665555543 446677888999865 3567778887764
No 163
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=98.31 E-value=6.4e-06 Score=70.76 Aligned_cols=197 Identities=18% Similarity=0.204 Sum_probs=119.7
Q ss_pred ceEEEeecC---CCCCCeEEEEEcCccCCCc-chHHHHHHHHHhcCcEEEEeccC-CCCCccCCCCcccchHHHHhhc--
Q 025842 30 LNTYVTGSG---PPDSKSAILLISDVFGYEA-PLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIH-- 102 (247)
Q Consensus 30 ~~~~~~~p~---~~~~~~~vv~~hgg~g~~~-~~~~~~a~~la~~G~~v~~~d~~-~g~~~~~~~~~~~~~~~~~~~~-- 102 (247)
++.+++.-. -.+++|.+|+.+|++|.+- .+|+.--..|.++|+.....+.| .|.-. ..|-+.-
T Consensus 454 VPM~Iv~kk~~k~dg~~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VRGGGe~G----------~~WHk~G~l 523 (712)
T KOG2237|consen 454 VPMFIVYKKDIKLDGSKPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVRGGGEYG----------EQWHKDGRL 523 (712)
T ss_pred cceEEEEechhhhcCCCceEEEEecccceeeccccccceeEEEecceEEEEEeeccCcccc----------cchhhccch
Confidence 566665421 2356899999999998431 22322222344689999999998 33311 1121111
Q ss_pred -CCccccchHHHHHHHHHhcC---CCeEEEEEecccHHHHHHhh-cCC-CccEEEEecCCCCC-----------------
Q 025842 103 -NTDKGYVDAKSVIAALKSKG---VSAIGAAGFCWGGVVAAKLA-SSH-DIQAAVVLHPGAIT----------------- 159 (247)
Q Consensus 103 -~~~~~~~d~~~~i~~l~~~~---~~~i~l~G~S~Gg~~a~~~a-~~~-~i~~~v~~~~~~~~----------------- 159 (247)
.-....+|..+..++|-+.+ ..+..+.|.|.||.++..++ .++ -+.++++--|..+.
T Consensus 524 akKqN~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~VpfmDvL~t~~~tilplt~sd~e 603 (712)
T KOG2237|consen 524 AKKQNSFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFMDVLNTHKDTILPLTTSDYE 603 (712)
T ss_pred hhhcccHHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccCchHhhhhhhcCcceehhhhhccCccccchhhhc
Confidence 11334588999999999884 57999999999999998877 445 56666664444310
Q ss_pred ----------------cccccccc-----ccEEEeecCCCCCCCHHHHHHHHHHHHhc------cCCCeeEEEeCCCCcc
Q 025842 160 ----------------VDDINEIK-----VPVAILGAEIDHVSPPEDLKRFGEILSAK------LKNDCLVKIYPRVSHG 212 (247)
Q Consensus 160 ----------------~~~~~~~~-----~P~l~i~g~~D~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~~~~H~ 212 (247)
...+.+++ +-+|+..+.+|+-|++-.+.++.++++.. ...++-+.+..++||+
T Consensus 604 e~g~p~~~~~~~~i~~y~pv~~i~~q~~YPS~lvtta~hD~RV~~~~~~K~vAklre~~~~~~~q~~pvll~i~~~agH~ 683 (712)
T KOG2237|consen 604 EWGNPEDFEDLIKISPYSPVDNIKKQVQYPSMLVTTADHDDRVGPLESLKWVAKLREATCDSLKQTNPVLLRIETKAGHG 683 (712)
T ss_pred ccCChhhhhhhheecccCccCCCchhccCcceEEeeccCCCcccccchHHHHHHHHHHhhcchhcCCCEEEEEecCCccc
Confidence 11122221 23788888998776666666665555321 1236778889999997
Q ss_pred ccccCCCCChHHHHHHHHHHHHHHHHHHHHhc
Q 025842 213 WTVRYNVEDEFAVKSAEEAHEDMINWLTKYVK 244 (247)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~ 244 (247)
--.... ..-+..+...+||.+.+.
T Consensus 684 ~~~~~~--------k~~~E~a~~yaFl~K~~~ 707 (712)
T KOG2237|consen 684 AEKPRF--------KQIEEAAFRYAFLAKMLN 707 (712)
T ss_pred cCCchH--------HHHHHHHHHHHHHHHHhc
Confidence 533211 233344556677766553
No 164
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=98.30 E-value=7.6e-06 Score=79.10 Aligned_cols=97 Identities=11% Similarity=0.118 Sum_probs=61.9
Q ss_pred CCeEEEEEcCccCCCcchHHHHHHHHHhcCcEEEEeccC-CCCCccCCCCcccchHHHHhhcCCccccchHHHHHHHHHh
Q 025842 42 SKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKS 120 (247)
Q Consensus 42 ~~~~vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~ 120 (247)
..++++++||+.| +...|..+++.|. .++.|+.++.+ ++.+. ....++.. .++++.+.++.+
T Consensus 1067 ~~~~l~~lh~~~g-~~~~~~~l~~~l~-~~~~v~~~~~~g~~~~~----~~~~~l~~---------la~~~~~~i~~~-- 1129 (1296)
T PRK10252 1067 DGPTLFCFHPASG-FAWQFSVLSRYLD-PQWSIYGIQSPRPDGPM----QTATSLDE---------VCEAHLATLLEQ-- 1129 (1296)
T ss_pred CCCCeEEecCCCC-chHHHHHHHHhcC-CCCcEEEEECCCCCCCC----CCCCCHHH---------HHHHHHHHHHhh--
Confidence 3477999996655 4567888998884 46999999996 43221 11112221 223333333322
Q ss_pred cCCCeEEEEEecccHHHHHHhhcC----C-CccEEEEecC
Q 025842 121 KGVSAIGAAGFCWGGVVAAKLASS----H-DIQAAVVLHP 155 (247)
Q Consensus 121 ~~~~~i~l~G~S~Gg~~a~~~a~~----~-~i~~~v~~~~ 155 (247)
....+..++|||+||.++..+|.. + ++..++++.+
T Consensus 1130 ~~~~p~~l~G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~ 1169 (1296)
T PRK10252 1130 QPHGPYHLLGYSLGGTLAQGIAARLRARGEEVAFLGLLDT 1169 (1296)
T ss_pred CCCCCEEEEEechhhHHHHHHHHHHHHcCCceeEEEEecC
Confidence 123589999999999999998852 2 6777776654
No 165
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.25 E-value=2.4e-05 Score=58.91 Aligned_cols=99 Identities=13% Similarity=0.125 Sum_probs=67.8
Q ss_pred EEEEEcCccCC---CcchHHHHHHHHHhcCcEEEEeccC-CCCCccCCCCcccchHHHHhhcCCccccchHHHHHHHHHh
Q 025842 45 AILLISDVFGY---EAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKS 120 (247)
Q Consensus 45 ~vv~~hgg~g~---~~~~~~~~a~~la~~G~~v~~~d~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~ 120 (247)
..|++-||.|. .......++..|.+.+|..+.+.++ +-.++ ...+..+..+|+..+++++..
T Consensus 37 ~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy~G~--------------Gt~slk~D~edl~~l~~Hi~~ 102 (299)
T KOG4840|consen 37 VKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSYNGY--------------GTFSLKDDVEDLKCLLEHIQL 102 (299)
T ss_pred EEEEEEcccCCCccccccHHHHHHHHhhccceeeeeecccccccc--------------ccccccccHHHHHHHHHHhhc
Confidence 44444456663 2344567888998999999999996 21111 112334455889999998876
Q ss_pred cC-CCeEEEEEecccHHHHHHhhcC----CCccEEEEecCCC
Q 025842 121 KG-VSAIGAAGFCWGGVVAAKLASS----HDIQAAVVLHPGA 157 (247)
Q Consensus 121 ~~-~~~i~l~G~S~Gg~~a~~~a~~----~~i~~~v~~~~~~ 157 (247)
.+ ...|.++|||.|..-.+.+..+ ..+.+.|+..|..
T Consensus 103 ~~fSt~vVL~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVS 144 (299)
T KOG4840|consen 103 CGFSTDVVLVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVS 144 (299)
T ss_pred cCcccceEEEecCccchHHHHHHHhccchHHHHHHHHhCccc
Confidence 64 3599999999999887776522 2777777777765
No 166
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=98.23 E-value=0.00014 Score=57.57 Aligned_cols=187 Identities=14% Similarity=0.165 Sum_probs=107.6
Q ss_pred ecCceEEEeecCCCCCCeEEEEEcCccCCCcch-HH-----HHHHHHHhcCcEEEEeccC-CCCCccCCCCcccchHHHH
Q 025842 27 LGGLNTYVTGSGPPDSKSAILLISDVFGYEAPL-FR-----KLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWR 99 (247)
Q Consensus 27 ~~~~~~~~~~p~~~~~~~~vv~~hgg~g~~~~~-~~-----~~a~~la~~G~~v~~~d~~-~g~~~~~~~~~~~~~~~~~ 99 (247)
.|.+..++.- .+++.+|++|-+| -.|.+... +. +-+..+. +.|.++=+|.+ +.... .....+ .
T Consensus 8 ~G~v~V~v~G-~~~~~kp~ilT~H-DvGlNh~scF~~ff~~~~m~~i~-~~f~i~Hi~aPGqe~ga-~~~p~~------y 77 (283)
T PF03096_consen 8 YGSVHVTVQG-DPKGNKPAILTYH-DVGLNHKSCFQGFFNFEDMQEIL-QNFCIYHIDAPGQEEGA-ATLPEG------Y 77 (283)
T ss_dssp TEEEEEEEES-S--TTS-EEEEE---TT--HHHHCHHHHCSHHHHHHH-TTSEEEEEE-TTTSTT------TT-------
T ss_pred ceEEEEEEEe-cCCCCCceEEEec-cccccchHHHHHHhcchhHHHHh-hceEEEEEeCCCCCCCc-cccccc------c
Confidence 3445666652 2223578888888 55644332 22 2223443 45999999997 33322 111111 1
Q ss_pred hhcCCccccchHHHHHHHHHhcCCCeEEEEEecccHHHHHHhhcCC--CccEEEEecCCCCC------------------
Q 025842 100 KIHNTDKGYVDAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLASSH--DIQAAVVLHPGAIT------------------ 159 (247)
Q Consensus 100 ~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~~~~~~------------------ 159 (247)
..-+.++..+++..+++++ +.+.++-+|.-.||++-..+|..+ ++.++|++++....
T Consensus 78 ~yPsmd~LAe~l~~Vl~~f---~lk~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~gw~Ew~~~K~~~~~L~~ 154 (283)
T PF03096_consen 78 QYPSMDQLAEMLPEVLDHF---GLKSVIGFGVGAGANILARFALKHPERVLGLILVNPTCTAAGWMEWFYQKLSSWLLYS 154 (283)
T ss_dssp ----HHHHHCTHHHHHHHH---T---EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S---HHHHHHHHHH------
T ss_pred cccCHHHHHHHHHHHHHhC---CccEEEEEeeccchhhhhhccccCccceeEEEEEecCCCCccHHHHHHHHHhcccccc
Confidence 2233355567888888887 677899999999999999988554 99999999988710
Q ss_pred ---------------------------------------------------------ccccccccccEEEeecCCCCCCC
Q 025842 160 ---------------------------------------------------------VDDINEIKVPVAILGAEIDHVSP 182 (247)
Q Consensus 160 ---------------------------------------------------------~~~~~~~~~P~l~i~g~~D~~~~ 182 (247)
....+...+|+|++.|+.-+..
T Consensus 155 ~gmt~~~~d~Ll~h~Fg~~~~~~n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~~R~DL~~~~~~~~c~vLlvvG~~Sp~~- 233 (283)
T PF03096_consen 155 YGMTSSVKDYLLWHYFGKEEEENNSDLVQTYRQHLDERINPKNLALFLNSYNSRTDLSIERPSLGCPVLLVVGDNSPHV- 233 (283)
T ss_dssp -CTTS-HHHHHHHHHS-HHHHHCT-HHHHHHHHHHHT-TTHHHHHHHHHHHHT-----SECTTCCS-EEEEEETTSTTH-
T ss_pred cccccchHHhhhhcccccccccccHHHHHHHHHHHhcCCCHHHHHHHHHHHhccccchhhcCCCCCCeEEEEecCCcch-
Confidence 1234456799999999888855
Q ss_pred HHHHHHHHHHHHhccCCCeeEEEeCCCCccccccCCCCChHHHHHHHHHHHHHHHHHHH
Q 025842 183 PEDLKRFGEILSAKLKNDCLVKIYPRVSHGWTVRYNVEDEFAVKSAEEAHEDMINWLTK 241 (247)
Q Consensus 183 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~ 241 (247)
+.+.++..++... ..++..++++|=.... +++.+..+.+.=|++-
T Consensus 234 -~~vv~~ns~Ldp~---~ttllkv~dcGglV~e----------EqP~klaea~~lFlQG 278 (283)
T PF03096_consen 234 -DDVVEMNSKLDPT---KTTLLKVADCGGLVLE----------EQPGKLAEAFKLFLQG 278 (283)
T ss_dssp -HHHHHHHHHS-CC---CEEEEEETT-TT-HHH----------H-HHHHHHHHHHHHHH
T ss_pred -hhHHHHHhhcCcc---cceEEEecccCCcccc----------cCcHHHHHHHHHHHcc
Confidence 6777888888322 7899999988665443 3566677776666653
No 167
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=98.17 E-value=0.00016 Score=56.77 Aligned_cols=185 Identities=15% Similarity=0.115 Sum_probs=115.6
Q ss_pred cCceEEEeecCCCCCCeEEEEEcCccCCCcch-HH-----HHHHHHHhcCcEEEEeccC-CCCCccCCCCcccchHHHHh
Q 025842 28 GGLNTYVTGSGPPDSKSAILLISDVFGYEAPL-FR-----KLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRK 100 (247)
Q Consensus 28 ~~~~~~~~~p~~~~~~~~vv~~hgg~g~~~~~-~~-----~~a~~la~~G~~v~~~d~~-~g~~~~~~~~~~~~~~~~~~ 100 (247)
|.+...+.- .+++++|++|-.| ..|.+... +. +-+..+..+ |.++-+|.+ +-... ...-.+ +.
T Consensus 32 G~v~V~V~G-d~~~~kpaiiTyh-DlglN~~scFq~ff~~p~m~ei~~~-fcv~HV~~PGqe~gA-p~~p~~------y~ 101 (326)
T KOG2931|consen 32 GVVHVTVYG-DPKGNKPAIITYH-DLGLNHKSCFQGFFNFPDMAEILEH-FCVYHVDAPGQEDGA-PSFPEG------YP 101 (326)
T ss_pred ccEEEEEec-CCCCCCceEEEec-ccccchHhHhHHhhcCHhHHHHHhh-eEEEecCCCccccCC-ccCCCC------CC
Confidence 345556552 2334577777777 55643332 22 233455566 999999986 32222 111111 11
Q ss_pred hcCCccccchHHHHHHHHHhcCCCeEEEEEecccHHHHHHhhcCC--CccEEEEecCCCCC-------------------
Q 025842 101 IHNTDKGYVDAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLASSH--DIQAAVVLHPGAIT------------------- 159 (247)
Q Consensus 101 ~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~~~~~~------------------- 159 (247)
.-+.+...+++..+++++ +-+.|+-+|.-.|+++-.+.|..+ +|.++|++++....
T Consensus 102 yPsmd~LAd~l~~VL~~f---~lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a~gwiew~~~K~~s~~l~~~ 178 (326)
T KOG2931|consen 102 YPSMDDLADMLPEVLDHF---GLKSVIGMGVGAGAYILARFALNHPERVLGLVLINCDPCAKGWIEWAYNKVSSNLLYYY 178 (326)
T ss_pred CCCHHHHHHHHHHHHHhc---CcceEEEecccccHHHHHHHHhcChhheeEEEEEecCCCCchHHHHHHHHHHHHHHHhh
Confidence 123344456777777776 667899999999999999988665 99999999977600
Q ss_pred ----------------------------------------------------cc--------ccccccccEEEeecCCCC
Q 025842 160 ----------------------------------------------------VD--------DINEIKVPVAILGAEIDH 179 (247)
Q Consensus 160 ----------------------------------------------------~~--------~~~~~~~P~l~i~g~~D~ 179 (247)
+. ....+++|+|++.|++-+
T Consensus 179 Gmt~~~~d~ll~H~Fg~e~~~~~~diVq~Yr~~l~~~~N~~Nl~~fl~ayn~R~DL~~~r~~~~~tlkc~vllvvGd~Sp 258 (326)
T KOG2931|consen 179 GMTQGVKDYLLAHHFGKEELGNNSDIVQEYRQHLGERLNPKNLALFLNAYNGRRDLSIERPKLGTTLKCPVLLVVGDNSP 258 (326)
T ss_pred chhhhHHHHHHHHHhccccccccHHHHHHHHHHHHhcCChhHHHHHHHHhcCCCCccccCCCcCccccccEEEEecCCCc
Confidence 00 112456999999999888
Q ss_pred CCCHHHHHHHHHHHHhccCCCeeEEEeCCCCccccccCCCCChHHHHHHHHHHHHHHHHHH
Q 025842 180 VSPPEDLKRFGEILSAKLKNDCLVKIYPRVSHGWTVRYNVEDEFAVKSAEEAHEDMINWLT 240 (247)
Q Consensus 180 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~ 240 (247)
.+ +.+.....++.. . ...+..+.++|-..... ++....+.+.=|++
T Consensus 259 ~~--~~vv~~n~~Ldp-~--~ttllk~~d~g~l~~e~----------qP~kl~ea~~~Flq 304 (326)
T KOG2931|consen 259 HV--SAVVECNSKLDP-T--YTTLLKMADCGGLVQEE----------QPGKLAEAFKYFLQ 304 (326)
T ss_pred hh--hhhhhhhcccCc-c--cceEEEEcccCCccccc----------CchHHHHHHHHHHc
Confidence 66 566677777732 2 67888888887765442 34555555555554
No 168
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=98.17 E-value=9.6e-05 Score=60.51 Aligned_cols=82 Identities=18% Similarity=0.258 Sum_probs=61.2
Q ss_pred CCeEEEEEcCccCCCcchHHHHHHHHHhcCcEEEEeccCCCCCccCCCCcccchHHHHhhcCCccccchHHHHHHHHHhc
Q 025842 42 SKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSK 121 (247)
Q Consensus 42 ~~~~vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~ 121 (247)
....-||+.|-.|+. ..-++++.+|.++|+.|+-+|.. .. +++..+++....|+..++++.+..
T Consensus 259 sd~~av~~SGDGGWr-~lDk~v~~~l~~~gvpVvGvdsL-RY--------------fW~~rtPe~~a~Dl~r~i~~y~~~ 322 (456)
T COG3946 259 SDTVAVFYSGDGGWR-DLDKEVAEALQKQGVPVVGVDSL-RY--------------FWSERTPEQIAADLSRLIRFYARR 322 (456)
T ss_pred cceEEEEEecCCchh-hhhHHHHHHHHHCCCceeeeehh-hh--------------hhccCCHHHHHHHHHHHHHHHHHh
Confidence 445567777555553 34468999999999999999963 11 123445666779999999988874
Q ss_pred -CCCeEEEEEecccHHHHH
Q 025842 122 -GVSAIGAAGFCWGGVVAA 139 (247)
Q Consensus 122 -~~~~i~l~G~S~Gg~~a~ 139 (247)
+..++.++|+|+|+-+--
T Consensus 323 w~~~~~~liGySfGADvlP 341 (456)
T COG3946 323 WGAKRVLLIGYSFGADVLP 341 (456)
T ss_pred hCcceEEEEeecccchhhH
Confidence 888999999999997643
No 169
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.98 E-value=0.00012 Score=59.19 Aligned_cols=129 Identities=12% Similarity=0.139 Sum_probs=78.3
Q ss_pred CCCeEEEEEcCccCCCcchHHHHHHHHHhcCc--EEEEeccC-CCCCccCCCCcccchHHHHhhcCCccccchHHHHHHH
Q 025842 41 DSKSAILLISDVFGYEAPLFRKLADKVAGAGF--LVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAA 117 (247)
Q Consensus 41 ~~~~~vv~~hgg~g~~~~~~~~~a~~la~~G~--~v~~~d~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~ 117 (247)
..+..+||+||............++...+.|+ ..+.+.++ .|+-. ....+. . +......++..+|++
T Consensus 114 ~~k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~-~Yn~Dr-e--------S~~~Sr~aLe~~lr~ 183 (377)
T COG4782 114 SAKTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLL-GYNYDR-E--------STNYSRPALERLLRY 183 (377)
T ss_pred CCCeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeee-ecccch-h--------hhhhhHHHHHHHHHH
Confidence 34677888884333333445567776666654 45556665 33311 111111 1 112223778899999
Q ss_pred HHhc-CCCeEEEEEecccHHHHHHhhc-------C---CCccEEEEecCCCCCc------cccccccccEEEeecCCCC
Q 025842 118 LKSK-GVSAIGAAGFCWGGVVAAKLAS-------S---HDIQAAVVLHPGAITV------DDINEIKVPVAILGAEIDH 179 (247)
Q Consensus 118 l~~~-~~~~i~l~G~S~Gg~~a~~~a~-------~---~~i~~~v~~~~~~~~~------~~~~~~~~P~l~i~g~~D~ 179 (247)
|.+. ...+|.+++||||..+++...+ + .+|+-+|+..|..+.. ..+.+...|.-++...+|.
T Consensus 184 La~~~~~~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD~DVF~~Q~~~mg~~~~~ft~~~s~dDr 262 (377)
T COG4782 184 LATDKPVKRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDIDVDVFSSQIAAMGKPDPPFTLFVSRDDR 262 (377)
T ss_pred HHhCCCCceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCChhhHHHHHHHhcCCCCCeeEEecccch
Confidence 9987 4689999999999999887542 1 1789999999887431 1244455555555554443
No 170
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=97.90 E-value=0.00027 Score=60.47 Aligned_cols=64 Identities=20% Similarity=0.305 Sum_probs=45.9
Q ss_pred ccEEEeecCCCCCCCHHHHHHHHHHHHhccCCCeeEEEeCCCCccccccCCCCChHHHHHHHHHHHHH
Q 025842 168 VPVAILGAEIDHVSPPEDLKRFGEILSAKLKNDCLVKIYPRVSHGWTVRYNVEDEFAVKSAEEAHEDM 235 (247)
Q Consensus 168 ~P~l~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~ 235 (247)
+|+.|+.+.-|++. +..-.|.+++ +..|..+.+.++++.-|+|.+..-. +++-.+..+..++++
T Consensus 788 Pp~~i~ac~mDP~L--DD~vmfA~kL-r~lG~~v~l~vle~lPHGFLnft~l-s~E~~~~~~~CI~rl 851 (880)
T KOG4388|consen 788 PPVHIVACAMDPML--DDSVMFARKL-RNLGQPVTLRVLEDLPHGFLNFTAL-SRETRQAAELCIERL 851 (880)
T ss_pred CCceEEEeccCcch--hHHHHHHHHH-HhcCCceeehhhhcCCccceeHHhh-CHHHHHHHHHHHHHH
Confidence 68999999999988 5566788888 6678899999999999999764322 333223344444443
No 171
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.82 E-value=0.00011 Score=57.81 Aligned_cols=97 Identities=18% Similarity=0.168 Sum_probs=67.0
Q ss_pred eEEEEEcCccCCCcchHHHHHHHHHhcCcEEEEeccC-CCCCccCCCCcccchHHHHhhcCCccccchHHHHHHHHHhc-
Q 025842 44 SAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSK- 121 (247)
Q Consensus 44 ~~vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~- 121 (247)
++++++|+..|. ...|..++..|... ..|+..+.+ .+... ....++. +.+.+.++.+++.
T Consensus 1 ~pLF~fhp~~G~-~~~~~~L~~~l~~~-~~v~~l~a~g~~~~~----~~~~~l~------------~~a~~yv~~Ir~~Q 62 (257)
T COG3319 1 PPLFCFHPAGGS-VLAYAPLAAALGPL-LPVYGLQAPGYGAGE----QPFASLD------------DMAAAYVAAIRRVQ 62 (257)
T ss_pred CCEEEEcCCCCc-HHHHHHHHHHhccC-ceeeccccCcccccc----cccCCHH------------HHHHHHHHHHHHhC
Confidence 468888966664 45678889999776 888888885 22211 1111111 3355666666665
Q ss_pred CCCeEEEEEecccHHHHHHhhcC----C-CccEEEEecCCCC
Q 025842 122 GVSAIGAAGFCWGGVVAAKLASS----H-DIQAAVVLHPGAI 158 (247)
Q Consensus 122 ~~~~i~l~G~S~Gg~~a~~~a~~----~-~i~~~v~~~~~~~ 158 (247)
+..+..++|||+||.+|..+|.+ . .+..++++.+...
T Consensus 63 P~GPy~L~G~S~GG~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 63 PEGPYVLLGWSLGGAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred CCCCEEEEeeccccHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 55699999999999999998842 2 7888888887665
No 172
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=97.72 E-value=9.9e-05 Score=59.25 Aligned_cols=123 Identities=16% Similarity=0.152 Sum_probs=77.3
Q ss_pred CeEEEEEcCccCCCcchHHHHHHHHHhcCcEEEEeccC-CCCCccCCCCcccchHHHHhhcCCccccchHHHHHHHHHhc
Q 025842 43 KSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSK 121 (247)
Q Consensus 43 ~~~vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~ 121 (247)
...||++-|-.|.-. ......=++.||.|+-.+++ .+.|.+-|- + ......+.+++++.-+.
T Consensus 243 q~LvIC~EGNAGFYE---vG~m~tP~~lgYsvLGwNhPGFagSTG~P~-p-------------~n~~nA~DaVvQfAI~~ 305 (517)
T KOG1553|consen 243 QDLVICFEGNAGFYE---VGVMNTPAQLGYSVLGWNHPGFAGSTGLPY-P-------------VNTLNAADAVVQFAIQV 305 (517)
T ss_pred ceEEEEecCCccceE---eeeecChHHhCceeeccCCCCccccCCCCC-c-------------ccchHHHHHHHHHHHHH
Confidence 445666665445321 13344455789999999997 332221111 0 01113344555554443
Q ss_pred ---CCCeEEEEEecccHHHHHHhhcCC-CccEEEEecCCCC----------------------------Ccccccccccc
Q 025842 122 ---GVSAIGAAGFCWGGVVAAKLASSH-DIQAAVVLHPGAI----------------------------TVDDINEIKVP 169 (247)
Q Consensus 122 ---~~~~i~l~G~S~Gg~~a~~~a~~~-~i~~~v~~~~~~~----------------------------~~~~~~~~~~P 169 (247)
..+.|++.|||.||..+..+|..+ +++++|+-....+ ..+.+.+.+.|
T Consensus 306 Lgf~~edIilygWSIGGF~~~waAs~YPdVkavvLDAtFDDllpLAl~rMP~~~~giV~~aiRnh~NLnnaell~ry~GP 385 (517)
T KOG1553|consen 306 LGFRQEDIILYGWSIGGFPVAWAASNYPDVKAVVLDATFDDLLPLALFRMPTFFSGIVEHAIRNHMNLNNAELLARYKGP 385 (517)
T ss_pred cCCCccceEEEEeecCCchHHHHhhcCCCceEEEeecchhhhhhHHhhhchHHHHHHHHHHHHHhcccchHHHHHhhcCc
Confidence 467999999999999999988776 9999887443321 12345667889
Q ss_pred EEEeecCCCCCCC
Q 025842 170 VAILGAEIDHVSP 182 (247)
Q Consensus 170 ~l~i~g~~D~~~~ 182 (247)
+.+|.-.+|.+..
T Consensus 386 i~lIRRt~dEIit 398 (517)
T KOG1553|consen 386 IRLIRRTQDEIIT 398 (517)
T ss_pred hhHhhhhhHhhhh
Confidence 9999988887754
No 173
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.71 E-value=0.00028 Score=54.64 Aligned_cols=58 Identities=16% Similarity=0.281 Sum_probs=42.2
Q ss_pred EEEeecCCCCCCCHHHHHHHHHHHHhccCCCeeEEEeCCCCccccccCCCCChHHHHHHHHHHHHHHHHHHHH
Q 025842 170 VAILGAEIDHVSPPEDLKRFGEILSAKLKNDCLVKIYPRVSHGWTVRYNVEDEFAVKSAEEAHEDMINWLTKY 242 (247)
Q Consensus 170 ~l~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~ 242 (247)
++++.+++|..+|......+.+.++ .+++..++ +||.-..-. ..+...+.|.+-|++.
T Consensus 309 ~ivv~A~~D~Yipr~gv~~lQ~~WP-----g~eVr~~e-gGHVsayl~---------k~dlfRR~I~d~L~R~ 366 (371)
T KOG1551|consen 309 IIVVQAKEDAYIPRTGVRSLQEIWP-----GCEVRYLE-GGHVSAYLF---------KQDLFRRAIVDGLDRL 366 (371)
T ss_pred EEEEEecCCccccccCcHHHHHhCC-----CCEEEEee-cCceeeeeh---------hchHHHHHHHHHHHhh
Confidence 6788899999999999999999985 56777777 488543321 2356667777777654
No 174
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=97.70 E-value=0.00018 Score=61.59 Aligned_cols=110 Identities=21% Similarity=0.129 Sum_probs=67.1
Q ss_pred eEEEEEcCccCCCcch--HHHHHHHHHhc-CcEEEEeccC-CCCCccCCCCcccchHHHHhhcCCccccchHHHHHHHHH
Q 025842 44 SAILLISDVFGYEAPL--FRKLADKVAGA-GFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALK 119 (247)
Q Consensus 44 ~~vv~~hgg~g~~~~~--~~~~a~~la~~-G~~v~~~d~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~ 119 (247)
.||+|+-||-+.-... ...+...||++ |-.+++.++| .|+|. |...... +-.+..+.++.++|+..++++++
T Consensus 29 gpifl~~ggE~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~--P~~~~s~--~nL~yLt~~QALaD~a~F~~~~~ 104 (434)
T PF05577_consen 29 GPIFLYIGGEGPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQ--PFGDLST--ENLRYLTSEQALADLAYFIRYVK 104 (434)
T ss_dssp SEEEEEE--SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB---TTGGGGG--STTTC-SHHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCC--Cccccch--hhHHhcCHHHHHHHHHHHHHHHH
Confidence 4566665565532111 12345566654 8999999999 99987 4322211 12445677889999999999999
Q ss_pred hc----CCCeEEEEEecccHHHHHHhhcCC--CccEEEEecCCC
Q 025842 120 SK----GVSAIGAAGFCWGGVVAAKLASSH--DIQAAVVLHPGA 157 (247)
Q Consensus 120 ~~----~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~~~~ 157 (247)
.. ...|++++|-|.||++|..+-.++ -|.+.++.++..
T Consensus 105 ~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv 148 (434)
T PF05577_consen 105 KKYNTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPV 148 (434)
T ss_dssp HHTTTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--C
T ss_pred HhhcCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEecccee
Confidence 54 345999999999999999876544 788888877766
No 175
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=97.70 E-value=0.0009 Score=57.68 Aligned_cols=65 Identities=14% Similarity=0.199 Sum_probs=51.9
Q ss_pred cEEEeecCCCCCCCHHHHHHHHHHHHhccC-------CCeeEEEeCCCCccccccCCCCChHHHHHHHHHHHHHHHHHHH
Q 025842 169 PVAILGAEIDHVSPPEDLKRFGEILSAKLK-------NDCLVKIYPRVSHGWTVRYNVEDEFAVKSAEEAHEDMINWLTK 241 (247)
Q Consensus 169 P~l~i~g~~D~~~~~~~~~~~~~~l~~~~~-------~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~ 241 (247)
-+|+.||..|+++|+.....+++++....+ .-.++.+.||.+|+....... .-..+..+++|..+
T Consensus 355 KLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~--------~~d~l~aL~~WVE~ 426 (474)
T PF07519_consen 355 KLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPD--------PFDALTALVDWVEN 426 (474)
T ss_pred eEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCC--------CCCHHHHHHHHHhC
Confidence 499999999999999999999888854433 256899999999998765443 23788999999875
No 176
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=97.65 E-value=0.00025 Score=54.75 Aligned_cols=19 Identities=26% Similarity=0.387 Sum_probs=16.4
Q ss_pred CeEEEEEecccHHHHHHhh
Q 025842 124 SAIGAAGFCWGGVVAAKLA 142 (247)
Q Consensus 124 ~~i~l~G~S~Gg~~a~~~a 142 (247)
.+|.++|||+||.++-.+.
T Consensus 78 ~~IsfIgHSLGGli~r~al 96 (217)
T PF05057_consen 78 RKISFIGHSLGGLIARYAL 96 (217)
T ss_pred ccceEEEecccHHHHHHHH
Confidence 5899999999999987654
No 177
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=97.57 E-value=0.00071 Score=55.89 Aligned_cols=100 Identities=13% Similarity=0.155 Sum_probs=65.8
Q ss_pred CeEEEEEcCccCCC-cchHHHHHHHHHhcCcEEEEeccC-CCCCccCCCCcccchHHHHhhcCCccccchHHHHHHHHHh
Q 025842 43 KSAILLISDVFGYE-APLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKS 120 (247)
Q Consensus 43 ~~~vv~~hgg~g~~-~~~~~~~a~~la~~G~~v~~~d~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~ 120 (247)
.|.|++. .|++.. .....+....|. -+-+.+++| .+.|. |.-. +| +..+..+.+.|...+++.++.
T Consensus 63 rPtV~~T-~GY~~~~~p~r~Ept~Lld---~NQl~vEhRfF~~Sr--P~p~-----DW-~~Lti~QAA~D~Hri~~A~K~ 130 (448)
T PF05576_consen 63 RPTVLYT-EGYNVSTSPRRSEPTQLLD---GNQLSVEHRFFGPSR--PEPA-----DW-SYLTIWQAASDQHRIVQAFKP 130 (448)
T ss_pred CCeEEEe-cCcccccCccccchhHhhc---cceEEEEEeeccCCC--CCCC-----Cc-ccccHhHhhHHHHHHHHHHHh
Confidence 3433333 366532 222234555442 367888888 78776 3322 22 234556667999999999999
Q ss_pred cCCCeEEEEEecccHHHHHHhhcC-C-CccEEEEec
Q 025842 121 KGVSAIGAAGFCWGGVVAAKLASS-H-DIQAAVVLH 154 (247)
Q Consensus 121 ~~~~~i~l~G~S~Gg~~a~~~a~~-~-~i~~~v~~~ 154 (247)
.-..+++-.|-|-||+.++..=+- + ++.+.|...
T Consensus 131 iY~~kWISTG~SKGGmTa~y~rrFyP~DVD~tVaYV 166 (448)
T PF05576_consen 131 IYPGKWISTGGSKGGMTAVYYRRFYPDDVDGTVAYV 166 (448)
T ss_pred hccCCceecCcCCCceeEEEEeeeCCCCCCeeeeee
Confidence 877899999999999988776533 3 888888744
No 178
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=97.54 E-value=0.00035 Score=47.11 Aligned_cols=60 Identities=18% Similarity=0.227 Sum_probs=48.8
Q ss_pred ccccEEEeecCCCCCCCHHHHHHHHHHHHhccCCCeeEEEeCCCCccccccCCCCChHHHHHHHHHHHHHHHHHH
Q 025842 166 IKVPVAILGAEIDHVSPPEDLKRFGEILSAKLKNDCLVKIYPRVSHGWTVRYNVEDEFAVKSAEEAHEDMINWLT 240 (247)
Q Consensus 166 ~~~P~l~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~ 240 (247)
...|+|++.++.|+.+|.+.++.+.+.++ +.+++..++.||+..... ..=+.+.+.+||.
T Consensus 33 ~~~piL~l~~~~Dp~TP~~~a~~~~~~l~-----~s~lvt~~g~gHg~~~~~----------s~C~~~~v~~yl~ 92 (103)
T PF08386_consen 33 GAPPILVLGGTHDPVTPYEGARAMAARLP-----GSRLVTVDGAGHGVYAGG----------SPCVDKAVDDYLL 92 (103)
T ss_pred CCCCEEEEecCcCCCCcHHHHHHHHHHCC-----CceEEEEeccCcceecCC----------ChHHHHHHHHHHH
Confidence 35899999999999999999999999984 578999999999976421 1345666677775
No 179
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.49 E-value=0.00066 Score=49.18 Aligned_cols=102 Identities=12% Similarity=0.147 Sum_probs=68.3
Q ss_pred chHHHHHHHHHhc-CCCeEEEEEecccHHHHHHhhcCC--CccEEEEecCCCCC-----------------cccccccc-
Q 025842 109 VDAKSVIAALKSK-GVSAIGAAGFCWGGVVAAKLASSH--DIQAAVVLHPGAIT-----------------VDDINEIK- 167 (247)
Q Consensus 109 ~d~~~~i~~l~~~-~~~~i~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~~~~~~-----------------~~~~~~~~- 167 (247)
..=.+.-+|+.+. -+.+..+-|-||||..+..+..++ -+..+|++++.... .+.+..+.
T Consensus 85 ~rH~AyerYv~eEalpgs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvYdardffg~yyddDv~ynsP~dylpg~~d 164 (227)
T COG4947 85 ERHRAYERYVIEEALPGSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVYDARDFFGGYYDDDVYYNSPSDYLPGLAD 164 (227)
T ss_pred HHHHHHHHHHHHhhcCCCccccccchhhhhhhhhheeChhHhhhheeecceeeHHHhccccccCceeecChhhhccCCcC
Confidence 3344555666665 235678899999999999988655 77888888887632 12233333
Q ss_pred ---------ccEEEeecCCCCCCCHHHHHHHHHHHHhccCCCeeEEEeCCCCccc
Q 025842 168 ---------VPVAILGAEIDHVSPPEDLKRFGEILSAKLKNDCLVKIYPRVSHGW 213 (247)
Q Consensus 168 ---------~P~l~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~H~~ 213 (247)
..+.+..|.+|+..+ +.+++.+.+ .++.++.-+.++.|..|.+
T Consensus 165 p~~l~rlr~~~~vfc~G~e~~~L~--~~~~L~~~l-~dKqipaw~~~WggvaHdw 216 (227)
T COG4947 165 PFRLERLRRIDMVFCIGDEDPFLD--NNQHLSRLL-SDKQIPAWMHVWGGVAHDW 216 (227)
T ss_pred hHHHHHHhhccEEEEecCcccccc--chHHHHHHh-ccccccHHHHHhccccccc
Confidence 347788888888774 445666766 4444566777777777764
No 180
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=97.49 E-value=0.0081 Score=46.58 Aligned_cols=161 Identities=13% Similarity=0.169 Sum_probs=87.1
Q ss_pred EEEeecCCCCCCeEEEEEcCcc--CC-CcchHHHHHHHHHhcCcEEEEeccCCCCCccCCCCcccchHHHHhhcCCcccc
Q 025842 32 TYVTGSGPPDSKSAILLISDVF--GY-EAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGY 108 (247)
Q Consensus 32 ~~~~~p~~~~~~~~vv~~hgg~--g~-~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (247)
.|+..|+ +++. ||-+-||. |. ..-.|+.+.+.|+++||.|++.-|..+. +......- ..
T Consensus 8 ~wvl~P~--~P~g-vihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~tf-------DH~~~A~~--------~~ 69 (250)
T PF07082_consen 8 SWVLIPP--RPKG-VIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVVTF-------DHQAIARE--------VW 69 (250)
T ss_pred cEEEeCC--CCCE-EEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCCCC-------cHHHHHHH--------HH
Confidence 3566543 3444 55554443 32 2235788999999999999999885222 11111100 01
Q ss_pred chHHHHHHHHHhcC-----CCeEEEEEecccHHHHHHhhcCC--Ccc--EEEEecCCCC--------------------C
Q 025842 109 VDAKSVIAALKSKG-----VSAIGAAGFCWGGVVAAKLASSH--DIQ--AAVVLHPGAI--------------------T 159 (247)
Q Consensus 109 ~d~~~~i~~l~~~~-----~~~i~l~G~S~Gg~~a~~~a~~~--~i~--~~v~~~~~~~--------------------~ 159 (247)
......++.+.+.. .-++.-+|||+|+-+-+.+.... +-+ .+++|+-... +
T Consensus 70 ~~f~~~~~~L~~~~~~~~~~lP~~~vGHSlGcklhlLi~s~~~~~r~gniliSFNN~~a~~aIP~~~~l~~~l~~EF~Ps 149 (250)
T PF07082_consen 70 ERFERCLRALQKRGGLDPAYLPVYGVGHSLGCKLHLLIGSLFDVERAGNILISFNNFPADEAIPLLEQLAPALRLEFTPS 149 (250)
T ss_pred HHHHHHHHHHHHhcCCCcccCCeeeeecccchHHHHHHhhhccCcccceEEEecCChHHHhhCchHhhhccccccCccCC
Confidence 22334455555431 13788899999999988766332 222 3333332110 0
Q ss_pred ccc----c--ccccccEEEeecCCCCCCCHHHHHHHHHHHHhccCCCeeEEEeCCCCcccc
Q 025842 160 VDD----I--NEIKVPVAILGAEIDHVSPPEDLKRFGEILSAKLKNDCLVKIYPRVSHGWT 214 (247)
Q Consensus 160 ~~~----~--~~~~~P~l~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~H~~~ 214 (247)
.+. + .-....+++|.-.+|.+ +.+..+.+.++.....-.+....+| .|..-
T Consensus 150 P~ET~~li~~~Y~~~rnLLIkF~~D~i---Dqt~~L~~~L~~r~~~~~~~~~L~G-~HLTP 206 (250)
T PF07082_consen 150 PEETRRLIRESYQVRRNLLIKFNDDDI---DQTDELEQILQQRFPDMVSIQTLPG-NHLTP 206 (250)
T ss_pred HHHHHHHHHHhcCCccceEEEecCCCc---cchHHHHHHHhhhccccceEEeCCC-CCCCc
Confidence 000 0 00123578888888875 3455666666443333467788885 88654
No 181
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=97.47 E-value=0.00024 Score=62.65 Aligned_cols=119 Identities=13% Similarity=0.052 Sum_probs=70.3
Q ss_pred ceEEEeecCCCCC--CeEEEEEcCccC-CCc-c--hHHHHHHHHHhcCcEEEEeccCCCC-CccCCCCcccchHHHHhhc
Q 025842 30 LNTYVTGSGPPDS--KSAILLISDVFG-YEA-P--LFRKLADKVAGAGFLVVAPDFFYGD-PIVDLNNPQFDREAWRKIH 102 (247)
Q Consensus 30 ~~~~~~~p~~~~~--~~~vv~~hgg~g-~~~-~--~~~~~a~~la~~G~~v~~~d~~~g~-~~~~~~~~~~~~~~~~~~~ 102 (247)
+.+=++.|..... .|++|++|||.= ... . ........+..+...|+++.||-|. +.....+.. ...++.
T Consensus 97 LylNV~tp~~~~~~~~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~-~~gN~g--- 172 (545)
T KOG1516|consen 97 LYLNVYTPQGCSESKLPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSA-APGNLG--- 172 (545)
T ss_pred ceEEEeccCCCccCCCCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecCCCC-CCCccc---
Confidence 4444443333322 688999996532 111 1 1122333444557999999998331 110011111 111221
Q ss_pred CCccccchHHHHHHHHHhc------CCCeEEEEEecccHHHHHHhhcCC----CccEEEEecCCC
Q 025842 103 NTDKGYVDAKSVIAALKSK------GVSAIGAAGFCWGGVVAAKLASSH----DIQAAVVLHPGA 157 (247)
Q Consensus 103 ~~~~~~~d~~~~i~~l~~~------~~~~i~l~G~S~Gg~~a~~~a~~~----~i~~~v~~~~~~ 157 (247)
..|...+++|+++. |+++|.++|||.||..+..+...+ .+..+|..++..
T Consensus 173 -----l~Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~~ 232 (545)
T KOG1516|consen 173 -----LFDQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGNA 232 (545)
T ss_pred -----HHHHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhcccc
Confidence 24888999999986 578999999999999998877554 556666655554
No 182
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=97.41 E-value=0.00064 Score=56.04 Aligned_cols=97 Identities=19% Similarity=0.184 Sum_probs=63.5
Q ss_pred CeEEEEEcCccCCCcchHHHHHHHHHhcCcE---EEEeccCCCCCccCCCCcccchHHHHhhcCCccccchHHHHHHHHH
Q 025842 43 KSAILLISDVFGYEAPLFRKLADKVAGAGFL---VVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALK 119 (247)
Q Consensus 43 ~~~vv~~hgg~g~~~~~~~~~a~~la~~G~~---v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~ 119 (247)
.-+++++||. +.....+..+...++..||. +..+++. +... ..... ...+.+...++.+.
T Consensus 59 ~~pivlVhG~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~--~~~~~-------------~~~~ql~~~V~~~l 121 (336)
T COG1075 59 KEPIVLVHGL-GGGYGNFLPLDYRLAILGWLTNGVYAFELS-GGDG--TYSLA-------------VRGEQLFAYVDEVL 121 (336)
T ss_pred CceEEEEccC-cCCcchhhhhhhhhcchHHHhccccccccc-ccCC--Ccccc-------------ccHHHHHHHHHHHH
Confidence 4589999976 55567778888888888888 8888874 2211 11100 01122333333332
Q ss_pred -hcCCCeEEEEEecccHHHHHHhhcCC----CccEEEEecCC
Q 025842 120 -SKGVSAIGAAGFCWGGVVAAKLASSH----DIQAAVVLHPG 156 (247)
Q Consensus 120 -~~~~~~i~l~G~S~Gg~~a~~~a~~~----~i~~~v~~~~~ 156 (247)
..+.+++.++||||||..+..++... .|+.++.+++.
T Consensus 122 ~~~ga~~v~LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp 163 (336)
T COG1075 122 AKTGAKKVNLIGHSMGGLDSRYYLGVLGGANRVASVVTLGTP 163 (336)
T ss_pred hhcCCCceEEEeecccchhhHHHHhhcCccceEEEEEEeccC
Confidence 23678999999999999999877443 68888877654
No 183
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.36 E-value=0.001 Score=58.98 Aligned_cols=104 Identities=20% Similarity=0.168 Sum_probs=59.3
Q ss_pred EeecCceEEEeecCCC--------CCCeEEEEEcCccCCCcchHHHHHHHHHh----------------cCcEEEEeccC
Q 025842 25 QQLGGLNTYVTGSGPP--------DSKSAILLISDVFGYEAPLFRKLADKVAG----------------AGFLVVAPDFF 80 (247)
Q Consensus 25 ~~~~~~~~~~~~p~~~--------~~~~~vv~~hgg~g~~~~~~~~~a~~la~----------------~G~~v~~~d~~ 80 (247)
.+.+.-..|++.-... -..-||+|++|..|+- .-.+.+|....+ ..|.-+++|+
T Consensus 63 ~~a~kY~LYLY~Egs~~~e~~~lelsGIPVLFIPGNAGSy-KQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDF- 140 (973)
T KOG3724|consen 63 PQADKYSLYLYREGSRWWERSTLELSGIPVLFIPGNAGSY-KQVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDF- 140 (973)
T ss_pred CCCCceEEEEecccccccccccccCCCceEEEecCCCCch-HHHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcc-
Confidence 3456667777743211 1245899999776643 233445543331 1366666666
Q ss_pred CCC-CccCCCCcccchHHHHhhcCCccccchHHHHHHHHHhc-------C---CCeEEEEEecccHHHHHHhhc
Q 025842 81 YGD-PIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSK-------G---VSAIGAAGFCWGGVVAAKLAS 143 (247)
Q Consensus 81 ~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~-------~---~~~i~l~G~S~Gg~~a~~~a~ 143 (247)
.++ +. +......++++-+..+|+++... + +..|+++||||||.+|..++.
T Consensus 141 nEe~tA-------------m~G~~l~dQtEYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~t 201 (973)
T KOG3724|consen 141 NEEFTA-------------MHGHILLDQTEYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLT 201 (973)
T ss_pred cchhhh-------------hccHhHHHHHHHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHh
Confidence 222 11 22223333445555666665543 1 457999999999999998763
No 184
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.33 E-value=0.012 Score=48.22 Aligned_cols=179 Identities=14% Similarity=0.085 Sum_probs=112.0
Q ss_pred CCeEEEEEcCccCCCcchHHHHHHHHHhcCcEEEEeccC-CCCCccCCCCcccchHHHHhhcCCccccchH-HHHHHHHH
Q 025842 42 SKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKGYVDA-KSVIAALK 119 (247)
Q Consensus 42 ~~~~vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~-~~~i~~l~ 119 (247)
...+||++-||.|....+.......+-+.||.++.+-.+ +-... ........ ...+ ..+...+.
T Consensus 37 s~k~Iv~~~gWag~~~r~l~ky~~~Yq~~g~~~~~~tap~~~~~~-~~s~~~~s-------------l~~~~~~l~~L~~ 102 (350)
T KOG2521|consen 37 SEKPIVVLLGWAGAIDRNLMKYSKIYQDKGYIVVRITAPCPSVFL-SASRRILS-------------LSLASTRLSELLS 102 (350)
T ss_pred ccccEEEEeeeccccchhHHHHHHHHhcCCceEEEecCccccccc-ccccccch-------------hhHHHHHHHHHhh
Confidence 343555666588877666667778888889999999886 32222 11111111 0122 12222222
Q ss_pred h--cCCCeEEEEEecccHHHHHHhh-----cC-C----CccEEEEec-CCC-----------------------------
Q 025842 120 S--KGVSAIGAAGFCWGGVVAAKLA-----SS-H----DIQAAVVLH-PGA----------------------------- 157 (247)
Q Consensus 120 ~--~~~~~i~l~G~S~Gg~~a~~~a-----~~-~----~i~~~v~~~-~~~----------------------------- 157 (247)
. .+..++++--+|+||...+... .. + ...+++..+ |..
T Consensus 103 ~~~~~~~pi~fh~FS~ng~~~~~si~~~~~~~~~~~~~~~~~~~fdS~p~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 182 (350)
T KOG2521|consen 103 DYNSDPCPIIFHVFSGNGVRLMYSISLQLIKHEPKAAQLSGGIIFDSAPARSSPVQLGWAVSFSSPPDDYVARWARLNYH 182 (350)
T ss_pred hccCCcCceEEEEecCCceeehHHHHHHHhhcCchhHhhcCCceEeccccccchhhhcceeccccCchhhHHHHHhcCeE
Confidence 2 2567999999999998876522 11 1 222222211 111
Q ss_pred ----------------------CC-----------ccccccccccEEEeecCCCCCCCHHHHHHHHHHHHhccCCCeeEE
Q 025842 158 ----------------------IT-----------VDDINEIKVPVAILGAEIDHVSPPEDLKRFGEILSAKLKNDCLVK 204 (247)
Q Consensus 158 ----------------------~~-----------~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~ 204 (247)
.. .........+.+.+++..|.++|.+..+++.+.. +..|+.+...
T Consensus 183 i~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~ly~~s~~d~v~~~~~ie~f~~~~-~~~g~~v~s~ 261 (350)
T KOG2521|consen 183 ITLLTMAGNEGGAYLLGPLAEKISMSRKYHFLDRYEEQRNELPWNQLYLYSDNDDVLPADEIEKFIALR-REKGVNVKSV 261 (350)
T ss_pred EEEEEeeecccchhhhhhhhhccccccchHHHHHHHhhhhcccccceeecCCccccccHHHHHHHHHHH-HhcCceEEEe
Confidence 00 0011122467888999999999999999998777 7788899999
Q ss_pred EeCCCCccccccCCCCChHHHHHHHHHHHHHHHHHHHHhc
Q 025842 205 IYPRVSHGWTVRYNVEDEFAVKSAEEAHEDMINWLTKYVK 244 (247)
Q Consensus 205 ~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~ 244 (247)
-+.++.|.-..... +...++...+|++....
T Consensus 262 ~~~ds~H~~h~r~~---------p~~y~~~~~~Fl~~~~~ 292 (350)
T KOG2521|consen 262 KFKDSEHVAHFRSF---------PKTYLKKCSEFLRSVIS 292 (350)
T ss_pred eccCccceeeeccC---------cHHHHHHHHHHHHhccc
Confidence 99999997755544 46889999999987643
No 185
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=97.26 E-value=0.0032 Score=47.62 Aligned_cols=83 Identities=19% Similarity=0.167 Sum_probs=49.6
Q ss_pred CcchHHHHHHHHHhcCcEEEEeccC-CCCCccCCCCcccchHHHHhhcCCccccchHHHHHHHHHhc-CCCeEEEEEecc
Q 025842 56 EAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSK-GVSAIGAAGFCW 133 (247)
Q Consensus 56 ~~~~~~~~a~~la~~G~~v~~~d~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~-~~~~i~l~G~S~ 133 (247)
....+..++..|.. .+.|+.++++ ++.+. .. ..+.. ..+....+.+... +..++.++|||+
T Consensus 11 ~~~~~~~~~~~l~~-~~~v~~~~~~g~~~~~--~~--~~~~~------------~~~~~~~~~l~~~~~~~~~~l~g~s~ 73 (212)
T smart00824 11 GPHEYARLAAALRG-RRDVSALPLPGFGPGE--PL--PASAD------------ALVEAQAEAVLRAAGGRPFVLVGHSS 73 (212)
T ss_pred cHHHHHHHHHhcCC-CccEEEecCCCCCCCC--CC--CCCHH------------HHHHHHHHHHHHhcCCCCeEEEEECH
Confidence 34557778888854 5899999986 43322 11 11111 1122223333332 356899999999
Q ss_pred cHHHHHHhhcC----C-CccEEEEecC
Q 025842 134 GGVVAAKLASS----H-DIQAAVVLHP 155 (247)
Q Consensus 134 Gg~~a~~~a~~----~-~i~~~v~~~~ 155 (247)
||.++...+.. . .+..++.+.+
T Consensus 74 Gg~~a~~~a~~l~~~~~~~~~l~~~~~ 100 (212)
T smart00824 74 GGLLAHAVAARLEARGIPPAAVVLLDT 100 (212)
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEEcc
Confidence 99999887642 2 5777766543
No 186
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.22 E-value=0.0015 Score=53.91 Aligned_cols=98 Identities=18% Similarity=0.286 Sum_probs=68.2
Q ss_pred CeEEEEEcCccCC------CcchHHHHHHHHHhcCcEEEEeccC-CCCCccCCCCcccchHHHHhhcCCccccchHHHHH
Q 025842 43 KSAILLISDVFGY------EAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVI 115 (247)
Q Consensus 43 ~~~vv~~hgg~g~------~~~~~~~~a~~la~~G~~v~~~d~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i 115 (247)
..||++..|--|. +...+.++|.+ .+-.++..++| +|++. +-.+............+.++..+|...++
T Consensus 80 ~gPIffYtGNEGdie~Fa~ntGFm~D~Ap~---~~AllVFaEHRyYGeS~-PFG~~s~k~~~hlgyLtseQALADfA~ll 155 (492)
T KOG2183|consen 80 EGPIFFYTGNEGDIEWFANNTGFMWDLAPE---LKALLVFAEHRYYGESL-PFGSQSYKDARHLGYLTSEQALADFAELL 155 (492)
T ss_pred CCceEEEeCCcccHHHHHhccchHHhhhHh---hCceEEEeehhccccCC-CCcchhccChhhhccccHHHHHHHHHHHH
Confidence 3778888854442 22333444543 36789999999 89987 33333344444455567788889999999
Q ss_pred HHHHhc---CCCeEEEEEecccHHHHHHhhcC
Q 025842 116 AALKSK---GVSAIGAAGFCWGGVVAAKLASS 144 (247)
Q Consensus 116 ~~l~~~---~~~~i~l~G~S~Gg~~a~~~a~~ 144 (247)
..+++. ...+++++|-|.||+++...=.+
T Consensus 156 ~~lK~~~~a~~~pvIafGGSYGGMLaAWfRlK 187 (492)
T KOG2183|consen 156 TFLKRDLSAEASPVIAFGGSYGGMLAAWFRLK 187 (492)
T ss_pred HHHhhccccccCcEEEecCchhhHHHHHHHhc
Confidence 999986 45699999999999998875433
No 187
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=97.14 E-value=0.0035 Score=48.84 Aligned_cols=98 Identities=14% Similarity=0.145 Sum_probs=60.4
Q ss_pred eEEEEEcCccCCCcch--HHHHHHHHHhc-CcEEEEeccCCCCCccCCCCcccchHHHHhhcCCccccchHHHHHHHHHh
Q 025842 44 SAILLISDVFGYEAPL--FRKLADKVAGA-GFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKS 120 (247)
Q Consensus 44 ~~vv~~hgg~g~~~~~--~~~~a~~la~~-G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~ 120 (247)
-|+|++|| .|..+.+ +..+.+.+.+. |..|.+.+...|--. +.-..-| ++++-+.+.+....+
T Consensus 24 ~P~ii~HG-igd~c~~~~~~~~~q~l~~~~g~~v~~leig~g~~~------s~l~pl~-------~Qv~~~ce~v~~m~~ 89 (296)
T KOG2541|consen 24 VPVIVWHG-IGDSCSSLSMANLTQLLEELPGSPVYCLEIGDGIKD------SSLMPLW-------EQVDVACEKVKQMPE 89 (296)
T ss_pred CCEEEEec-cCcccccchHHHHHHHHHhCCCCeeEEEEecCCcch------hhhccHH-------HHHHHHHHHHhcchh
Confidence 67999995 4433444 67777777665 899999998423101 0011111 112334444443333
Q ss_pred cCCCeEEEEEecccHHHHHHhhc---CCCccEEEEecCC
Q 025842 121 KGVSAIGAAGFCWGGVVAAKLAS---SHDIQAAVVLHPG 156 (247)
Q Consensus 121 ~~~~~i~l~G~S~Gg~~a~~~a~---~~~i~~~v~~~~~ 156 (247)
. .+-..++|.|+||.++-.++. .+.++..|.+++.
T Consensus 90 l-sqGynivg~SQGglv~Raliq~cd~ppV~n~ISL~gP 127 (296)
T KOG2541|consen 90 L-SQGYNIVGYSQGGLVARALIQFCDNPPVKNFISLGGP 127 (296)
T ss_pred c-cCceEEEEEccccHHHHHHHHhCCCCCcceeEeccCC
Confidence 3 357889999999999988873 4588888876643
No 188
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=97.11 E-value=0.0033 Score=47.93 Aligned_cols=36 Identities=14% Similarity=0.191 Sum_probs=30.2
Q ss_pred CCCeEEEEEecccHHHHHHhhcCCCccEEEEecCCC
Q 025842 122 GVSAIGAAGFCWGGVVAAKLASSHDIQAAVVLHPGA 157 (247)
Q Consensus 122 ~~~~i~l~G~S~Gg~~a~~~a~~~~i~~~v~~~~~~ 157 (247)
..++|.++++|||-.+|..+.....++..++++|..
T Consensus 55 ~y~~i~lvAWSmGVw~A~~~l~~~~~~~aiAINGT~ 90 (213)
T PF04301_consen 55 GYREIYLVAWSMGVWAANRVLQGIPFKRAIAINGTP 90 (213)
T ss_pred cCceEEEEEEeHHHHHHHHHhccCCcceeEEEECCC
Confidence 457999999999999998876656788888888776
No 189
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.97 E-value=0.0026 Score=46.10 Aligned_cols=74 Identities=12% Similarity=0.034 Sum_probs=48.9
Q ss_pred chHHHHHHHHHh-cCCCeEEEEEecccHHHHHHhhcC------CCccEEEEecCCCCCccc------cccccccEEEeec
Q 025842 109 VDAKSVIAALKS-KGVSAIGAAGFCWGGVVAAKLASS------HDIQAAVVLHPGAITVDD------INEIKVPVAILGA 175 (247)
Q Consensus 109 ~d~~~~i~~l~~-~~~~~i~l~G~S~Gg~~a~~~a~~------~~i~~~v~~~~~~~~~~~------~~~~~~P~l~i~g 175 (247)
..+...++.... .+..+|.++|||+||.+|..++.. .....++.+++....... .......+.-++.
T Consensus 12 ~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~~~~~~~~~~~~~~~~~~~~~~i~~ 91 (153)
T cd00741 12 NLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPRVGNAAFAEDRLDPSDALFVDRIVN 91 (153)
T ss_pred HHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCcccchHHHHHhhhccCCccEEEEEE
Confidence 344444444433 356799999999999999997732 256667778776644332 2234467888888
Q ss_pred CCCCCCC
Q 025842 176 EIDHVSP 182 (247)
Q Consensus 176 ~~D~~~~ 182 (247)
..|.+-.
T Consensus 92 ~~D~v~~ 98 (153)
T cd00741 92 DNDIVPR 98 (153)
T ss_pred CCCccCC
Confidence 8887643
No 190
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=96.95 E-value=0.0027 Score=53.46 Aligned_cols=81 Identities=19% Similarity=0.204 Sum_probs=55.7
Q ss_pred hHHHHHHHHHhcCcEE----EE--eccCCCCCccCCCCcccchHHHHhhcCCccccchHHHHHHHHHhcCCCeEEEEEec
Q 025842 59 LFRKLADKVAGAGFLV----VA--PDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSKGVSAIGAAGFC 132 (247)
Q Consensus 59 ~~~~~a~~la~~G~~v----~~--~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S 132 (247)
.|..+++.|.+.||.. ++ +|.| .+. . .... ....++..|+.+.+....++.|+|||
T Consensus 66 ~~~~li~~L~~~GY~~~~~l~~~pYDWR--~~~---~----~~~~---------~~~~lk~~ie~~~~~~~~kv~li~HS 127 (389)
T PF02450_consen 66 YFAKLIENLEKLGYDRGKDLFAAPYDWR--LSP---A----ERDE---------YFTKLKQLIEEAYKKNGKKVVLIAHS 127 (389)
T ss_pred hHHHHHHHHHhcCcccCCEEEEEeechh--hch---h----hHHH---------HHHHHHHHHHHHHHhcCCcEEEEEeC
Confidence 5778999999877654 22 4553 111 0 1111 22567788887777667899999999
Q ss_pred ccHHHHHHhhcC--------CCccEEEEecCCC
Q 025842 133 WGGVVAAKLASS--------HDIQAAVVLHPGA 157 (247)
Q Consensus 133 ~Gg~~a~~~a~~--------~~i~~~v~~~~~~ 157 (247)
|||.++..+... ..|+++|.+++..
T Consensus 128 mGgl~~~~fl~~~~~~~W~~~~i~~~i~i~~p~ 160 (389)
T PF02450_consen 128 MGGLVARYFLQWMPQEEWKDKYIKRFISIGTPF 160 (389)
T ss_pred CCchHHHHHHHhccchhhHHhhhhEEEEeCCCC
Confidence 999999885522 1599999988765
No 191
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=96.77 E-value=0.0095 Score=47.27 Aligned_cols=104 Identities=13% Similarity=0.178 Sum_probs=48.0
Q ss_pred CCeEEEEEcCccCCC---cchHHHHHHHHHhc--CcEEEEeccCCCCCccCCCCcccchHHHHhhcCCccccchHHHHHH
Q 025842 42 SKSAILLISDVFGYE---APLFRKLADKVAGA--GFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIA 116 (247)
Q Consensus 42 ~~~~vv~~hgg~g~~---~~~~~~~a~~la~~--G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~ 116 (247)
...|||++| |.|.+ ...+..+.+.+.+. |--|.+++. |.+. ..+ ....+.. .....++.+...++
T Consensus 4 ~~~PvViwH-GmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~i--g~~~--~~D---~~~s~f~--~v~~Qv~~vc~~l~ 73 (279)
T PF02089_consen 4 SPLPVVIWH-GMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEI--GNDP--SED---VENSFFG--NVNDQVEQVCEQLA 73 (279)
T ss_dssp SS--EEEE---TT--S--TTTHHHHHHHHHHHSTT--EEE--S--SSSH--HHH---HHHHHHS--HHHHHHHHHHHHHH
T ss_pred CCCcEEEEE-cCccccCChhHHHHHHHHHHHhCCCceEEEEEE--CCCc--chh---hhhhHHH--HHHHHHHHHHHHHh
Confidence 346799999 44532 23455555544333 777888887 3221 000 0011110 01111222333333
Q ss_pred HHHhcCCCeEEEEEecccHHHHHHhhc---CCCccEEEEecCC
Q 025842 117 ALKSKGVSAIGAAGFCWGGVVAAKLAS---SHDIQAAVVLHPG 156 (247)
Q Consensus 117 ~l~~~~~~~i~l~G~S~Gg~~a~~~a~---~~~i~~~v~~~~~ 156 (247)
...++ .+-+.++|+|+||.++=.++. .+.|+.+|.+++.
T Consensus 74 ~~p~L-~~G~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggp 115 (279)
T PF02089_consen 74 NDPEL-ANGFNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGP 115 (279)
T ss_dssp H-GGG-TT-EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES--
T ss_pred hChhh-hcceeeeeeccccHHHHHHHHHCCCCCceeEEEecCc
Confidence 32222 257899999999999988874 3489999988754
No 192
>PLN02606 palmitoyl-protein thioesterase
Probab=96.75 E-value=0.024 Score=45.55 Aligned_cols=99 Identities=15% Similarity=0.091 Sum_probs=55.9
Q ss_pred CCeEEEEEcCccC-CCcchHHHHHHHHHhc-CcEEEEeccCCCCCccCCCCcccchHHHHhhcCCccccchHHHHHHHHH
Q 025842 42 SKSAILLISDVFG-YEAPLFRKLADKVAGA-GFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALK 119 (247)
Q Consensus 42 ~~~~vv~~hgg~g-~~~~~~~~~a~~la~~-G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~ 119 (247)
...|||++||... .....+..+.+.+.+. |.-+..+.. |... ..++ . .....+++.+.+.+....
T Consensus 25 ~~~PvViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~i--g~~~------~~s~---~--~~~~~Qv~~vce~l~~~~ 91 (306)
T PLN02606 25 LSVPFVLFHGFGGECSNGKVSNLTQFLINHSGYPGTCVEI--GNGV------QDSL---F--MPLRQQASIACEKIKQMK 91 (306)
T ss_pred CCCCEEEECCCCcccCCchHHHHHHHHHhCCCCCeEEEEE--CCCc------cccc---c--cCHHHHHHHHHHHHhcch
Confidence 3468999995431 3344677788777433 665555554 2111 0011 0 001112234444444433
Q ss_pred hcCCCeEEEEEecccHHHHHHhhc---C-CCccEEEEec
Q 025842 120 SKGVSAIGAAGFCWGGVVAAKLAS---S-HDIQAAVVLH 154 (247)
Q Consensus 120 ~~~~~~i~l~G~S~Gg~~a~~~a~---~-~~i~~~v~~~ 154 (247)
++. +-+.++|+|+||.++=.++. . +.|+..|.++
T Consensus 92 ~L~-~G~naIGfSQGglflRa~ierc~~~p~V~nlISlg 129 (306)
T PLN02606 92 ELS-EGYNIVAESQGNLVARGLIEFCDNAPPVINYVSLG 129 (306)
T ss_pred hhc-CceEEEEEcchhHHHHHHHHHCCCCCCcceEEEec
Confidence 332 46889999999999988773 3 4688888766
No 193
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=96.74 E-value=0.0053 Score=47.51 Aligned_cols=48 Identities=25% Similarity=0.211 Sum_probs=35.3
Q ss_pred hHHHHHHHHHhc---CCCeEEEEEecccHHHHHHhhcC------CCccEEEEecCCC
Q 025842 110 DAKSVIAALKSK---GVSAIGAAGFCWGGVVAAKLASS------HDIQAAVVLHPGA 157 (247)
Q Consensus 110 d~~~~i~~l~~~---~~~~i~l~G~S~Gg~~a~~~a~~------~~i~~~v~~~~~~ 157 (247)
....+++++++. ...+|.+.|||.||.+|..++.. .+|..+..+++..
T Consensus 67 ~q~~A~~yl~~~~~~~~~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPG 123 (224)
T PF11187_consen 67 QQKSALAYLKKIAKKYPGKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPG 123 (224)
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCC
Confidence 334555565553 34579999999999999997733 2889999888765
No 194
>PLN02633 palmitoyl protein thioesterase family protein
Probab=96.68 E-value=0.032 Score=44.88 Aligned_cols=100 Identities=12% Similarity=0.131 Sum_probs=58.9
Q ss_pred CCeEEEEEcCccCCC--cchHHHHHHHHHhc-CcEEEEeccCCCCCccCCCCcccchHHHHhhcCCccccchHHHHHHHH
Q 025842 42 SKSAILLISDVFGYE--APLFRKLADKVAGA-GFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAAL 118 (247)
Q Consensus 42 ~~~~vv~~hgg~g~~--~~~~~~~a~~la~~-G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l 118 (247)
...|+|++| |.|.+ ...+..+++.+.+. |.-+.++.. |.+. ..+ |. ....++++.+.+.+...
T Consensus 24 ~~~P~ViwH-G~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i--g~~~------~~s---~~--~~~~~Qve~vce~l~~~ 89 (314)
T PLN02633 24 VSVPFIMLH-GIGTQCSDATNANFTQLLTNLSGSPGFCLEI--GNGV------GDS---WL--MPLTQQAEIACEKVKQM 89 (314)
T ss_pred CCCCeEEec-CCCcccCCchHHHHHHHHHhCCCCceEEEEE--CCCc------ccc---ce--eCHHHHHHHHHHHHhhc
Confidence 346799999 55532 23566777777443 677777665 3321 000 11 01112224444444443
Q ss_pred HhcCCCeEEEEEecccHHHHHHhhc---C-CCccEEEEecCC
Q 025842 119 KSKGVSAIGAAGFCWGGVVAAKLAS---S-HDIQAAVVLHPG 156 (247)
Q Consensus 119 ~~~~~~~i~l~G~S~Gg~~a~~~a~---~-~~i~~~v~~~~~ 156 (247)
.+.. +-+.++|+|+||.++=.++. . +.++..|.+++.
T Consensus 90 ~~l~-~G~naIGfSQGGlflRa~ierc~~~p~V~nlISlggp 130 (314)
T PLN02633 90 KELS-QGYNIVGRSQGNLVARGLIEFCDGGPPVYNYISLAGP 130 (314)
T ss_pred hhhh-CcEEEEEEccchHHHHHHHHHCCCCCCcceEEEecCC
Confidence 3332 46889999999999988773 3 478888887744
No 195
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=96.67 E-value=0.0044 Score=46.96 Aligned_cols=37 Identities=16% Similarity=0.179 Sum_probs=29.1
Q ss_pred cchHHHHHHHHHh-cC-CCeEEEEEecccHHHHHHhhcC
Q 025842 108 YVDAKSVIAALKS-KG-VSAIGAAGFCWGGVVAAKLASS 144 (247)
Q Consensus 108 ~~d~~~~i~~l~~-~~-~~~i~l~G~S~Gg~~a~~~a~~ 144 (247)
..|+.++.++-.+ .+ ..+|+|+|||+|+.+...|.++
T Consensus 77 y~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e 115 (207)
T PF11288_consen 77 YSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKE 115 (207)
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHH
Confidence 4788888875544 43 4599999999999999998743
No 196
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=96.66 E-value=0.021 Score=49.32 Aligned_cols=108 Identities=16% Similarity=0.120 Sum_probs=62.4
Q ss_pred CCCeEEEEEcCccCCCcchHHHHH-----------HHHH------hcCcEEEEeccC--CCCCccCCCCcccchHHHHhh
Q 025842 41 DSKSAILLISDVFGYEAPLFRKLA-----------DKVA------GAGFLVVAPDFF--YGDPIVDLNNPQFDREAWRKI 101 (247)
Q Consensus 41 ~~~~~vv~~hgg~g~~~~~~~~~a-----------~~la------~~G~~v~~~d~~--~g~~~~~~~~~~~~~~~~~~~ 101 (247)
...|.||++.||.|.++.. -.+. ..+. .+-..++.+|.+ .|.|. ...... .
T Consensus 75 ~~~Pl~lwlnGGPG~ss~~-G~f~E~GP~~i~~~~~~~~~n~~sW~~~~~~l~iDqP~G~G~S~--~~~~~~-------~ 144 (462)
T PTZ00472 75 PEAPVLLWMTGGPGCSSMF-ALLAENGPCLMNETTGDIYNNTYSWNNEAYVIYVDQPAGVGFSY--ADKADY-------D 144 (462)
T ss_pred CCCCEEEEECCCCcHHHHH-hhhccCCCeEEeCCCCceeECCcccccccCeEEEeCCCCcCccc--CCCCCC-------C
Confidence 3468999999998865321 0000 0010 112677778875 45544 111110 1
Q ss_pred cCCccccchHHHHHHHHHhc----CCCeEEEEEecccHHHHHHhhcC----------C--CccEEEEecCCCC
Q 025842 102 HNTDKGYVDAKSVIAALKSK----GVSAIGAAGFCWGGVVAAKLASS----------H--DIQAAVVLHPGAI 158 (247)
Q Consensus 102 ~~~~~~~~d~~~~i~~l~~~----~~~~i~l~G~S~Gg~~a~~~a~~----------~--~i~~~v~~~~~~~ 158 (247)
.+.+..++|+.++++...+. ...++.|+|+|+||..+..+|.. . .++++++-+|...
T Consensus 145 ~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg~~d 217 (462)
T PTZ00472 145 HNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNGLTD 217 (462)
T ss_pred CChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEeccccC
Confidence 12234456777777654432 34799999999999998776621 1 5777777776653
No 197
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=96.52 E-value=0.0029 Score=51.51 Aligned_cols=90 Identities=14% Similarity=0.136 Sum_probs=71.7
Q ss_pred CCCeEEEEEecccHHHHHHhh-cCCCccEEEEecCCCC------------------------------------------
Q 025842 122 GVSAIGAAGFCWGGVVAAKLA-SSHDIQAAVVLHPGAI------------------------------------------ 158 (247)
Q Consensus 122 ~~~~i~l~G~S~Gg~~a~~~a-~~~~i~~~v~~~~~~~------------------------------------------ 158 (247)
..+.+.+.|-|--|..++..| .++++.++|.+.-...
T Consensus 232 ~Ik~F~VTGaSKRgWttwLTAIaDprv~aIvp~v~D~Lni~a~L~hiyrsYGgnwpi~l~pyyaegi~erl~tp~fkqL~ 311 (507)
T COG4287 232 EIKGFMVTGASKRGWTTWLTAIADPRVFAIVPFVYDNLNIEAQLLHIYRSYGGNWPIKLAPYYAEGIDERLETPLFKQLL 311 (507)
T ss_pred eeeeEEEeccccchHHHHHHHhcCcchhhhhhhHHhhcccHHHHHHHHHhhCCCCCcccchhHhhhHHHhhcCHHHHHHH
Confidence 567999999999999999976 7778888887543320
Q ss_pred ---------CccccccccccEEEeecCCCCCCCHHHHHHHHHHHHhccCCCeeEEEeCCCCccccc
Q 025842 159 ---------TVDDINEIKVPVAILGAEIDHVSPPEDLKRFGEILSAKLKNDCLVKIYPRVSHGWTV 215 (247)
Q Consensus 159 ---------~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~H~~~~ 215 (247)
......++..|-.|+.+..|++++++++.-+++.|+. .+.+...|+..|....
T Consensus 312 ~IiDPlay~~try~~RLalpKyivnaSgDdff~pDsa~lYyd~LPG----~kaLrmvPN~~H~~~n 373 (507)
T COG4287 312 EIIDPLAYRNTRYQLRLALPKYIVNASGDDFFVPDSANLYYDDLPG----EKALRMVPNDPHNLIN 373 (507)
T ss_pred HhhcHHHHhhhhhhhhccccceeecccCCcccCCCccceeeccCCC----ceeeeeCCCCcchhhH
Confidence 0112356788999999999999999999999999953 5678889999998654
No 198
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=96.43 E-value=0.016 Score=43.01 Aligned_cols=73 Identities=15% Similarity=0.232 Sum_probs=51.7
Q ss_pred chHHHHHHHHHhc--CCCeEEEEEecccHHHHHHhhcC-C-CccEEEEecCCCCCcccccccc---ccEEEeecCCCCCC
Q 025842 109 VDAKSVIAALKSK--GVSAIGAAGFCWGGVVAAKLASS-H-DIQAAVVLHPGAITVDDINEIK---VPVAILGAEIDHVS 181 (247)
Q Consensus 109 ~d~~~~i~~l~~~--~~~~i~l~G~S~Gg~~a~~~a~~-~-~i~~~v~~~~~~~~~~~~~~~~---~P~l~i~g~~D~~~ 181 (247)
.++..+++-|+.. +..++.++|||+|+.++-.++.. . .+..++++............+. ..++...+.+|++-
T Consensus 92 ~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG~g~~~a~~l~~~~~~v~a~~a~~D~I~ 171 (177)
T PF06259_consen 92 PRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPGMGVDSASDLGVPPGHVYAMTAPGDPIA 171 (177)
T ss_pred HHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCCCCCCCHHHcCCCCCcEEEeeCCCCCcc
Confidence 5666677766654 35699999999999999998866 3 8888887664443333333333 45899999888763
No 199
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=96.25 E-value=0.017 Score=50.38 Aligned_cols=88 Identities=15% Similarity=0.138 Sum_probs=55.3
Q ss_pred HHHHHHHHHhcCcEEEEeccCCCCCccCCCCcccchHHHHhhcCCccccchHHHHHHHHHhc-CCCeEEEEEecccHHHH
Q 025842 60 FRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSK-GVSAIGAAGFCWGGVVA 138 (247)
Q Consensus 60 ~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~-~~~~i~l~G~S~Gg~~a 138 (247)
|..+.+.|++.||. -.++ .+.+. .-+..... ....+.....++..|+.+.+. +..+++|+||||||.++
T Consensus 158 w~kLIe~L~~iGY~--~~nL-~gAPY--DWRls~~~-----le~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~ 227 (642)
T PLN02517 158 WAVLIANLARIGYE--EKNM-YMAAY--DWRLSFQN-----TEVRDQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYF 227 (642)
T ss_pred HHHHHHHHHHcCCC--CCce-eeccc--ccccCccc-----hhhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHH
Confidence 47899999999997 4555 33322 00000000 000122225688888888765 46899999999999999
Q ss_pred HHhhc--C----------C-----CccEEEEecCCC
Q 025842 139 AKLAS--S----------H-----DIQAAVVLHPGA 157 (247)
Q Consensus 139 ~~~a~--~----------~-----~i~~~v~~~~~~ 157 (247)
+.... . . -|++.|.+++..
T Consensus 228 lyFL~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~ 263 (642)
T PLN02517 228 LHFMKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPF 263 (642)
T ss_pred HHHHHhccccccccCCcchHHHHHHHHHheeccccc
Confidence 98432 0 1 478888888765
No 200
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=96.19 E-value=0.0098 Score=42.24 Aligned_cols=32 Identities=25% Similarity=0.258 Sum_probs=22.8
Q ss_pred HHHHHHHHHhc-CCCeEEEEEecccHHHHHHhh
Q 025842 111 AKSVIAALKSK-GVSAIGAAGFCWGGVVAAKLA 142 (247)
Q Consensus 111 ~~~~i~~l~~~-~~~~i~l~G~S~Gg~~a~~~a 142 (247)
+...++.+.+. ...+|.+.|||+||.+|..++
T Consensus 50 ~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a 82 (140)
T PF01764_consen 50 ILDALKELVEKYPDYSIVITGHSLGGALASLAA 82 (140)
T ss_dssp HHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHH
T ss_pred HHHHHHHHHhcccCccchhhccchHHHHHHHHH
Confidence 33334333333 447999999999999999877
No 201
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=96.04 E-value=0.38 Score=38.41 Aligned_cols=68 Identities=16% Similarity=0.141 Sum_probs=46.5
Q ss_pred cccEEEeecCCCCCCCHHHHHHH---HHHHHhccCCCeeEEEeCCCCccccccCCCCChHHHHHHHHHHHHHHHHHHHHh
Q 025842 167 KVPVAILGAEIDHVSPPEDLKRF---GEILSAKLKNDCLVKIYPRVSHGWTVRYNVEDEFAVKSAEEAHEDMINWLTKYV 243 (247)
Q Consensus 167 ~~P~l~i~g~~D~~~~~~~~~~~---~~~l~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~ 243 (247)
++-.+-+-|++|++.-....+.. ...++.. ....+.-+++||.-...+. ...++...++.+|+.++-
T Consensus 339 ~~aL~tvEGEnDDIsgvGQTkAA~~LC~nIpe~---mk~hy~qp~vGHYGVFnGs-------rfr~eIvPri~dFI~~~d 408 (415)
T COG4553 339 NVALFTVEGENDDISGVGQTKAAHDLCSNIPED---MKQHYMQPDVGHYGVFNGS-------RFREEIVPRIRDFIRRYD 408 (415)
T ss_pred ceeEEEeecccccccccchhHHHHHHHhcChHH---HHHHhcCCCCCccceeccc-------hHHHHHHHHHHHHHHHhC
Confidence 35688999999998765554444 4444322 3466777899996544333 267899999999998764
Q ss_pred c
Q 025842 244 K 244 (247)
Q Consensus 244 ~ 244 (247)
+
T Consensus 409 ~ 409 (415)
T COG4553 409 R 409 (415)
T ss_pred c
Confidence 3
No 202
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=95.95 E-value=0.26 Score=42.16 Aligned_cols=36 Identities=17% Similarity=0.115 Sum_probs=29.7
Q ss_pred CCCeEEEEEecccHHHHHHhhcCCCccEEEEecCCC
Q 025842 122 GVSAIGAAGFCWGGVVAAKLASSHDIQAAVVLHPGA 157 (247)
Q Consensus 122 ~~~~i~l~G~S~Gg~~a~~~a~~~~i~~~v~~~~~~ 157 (247)
+.+.+++.|.|||..-|+.++.+-...|+|+-=|..
T Consensus 355 ~~~qLILSGlSMGTfgAlYYga~l~P~AIiVgKPL~ 390 (511)
T TIGR03712 355 DHDQLILSGLSMGTFGALYYGAKLSPHAIIVGKPLV 390 (511)
T ss_pred CHHHeeeccccccchhhhhhcccCCCceEEEcCccc
Confidence 356999999999999999999888888887655443
No 203
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=95.80 E-value=0.023 Score=42.37 Aligned_cols=73 Identities=19% Similarity=0.173 Sum_probs=44.7
Q ss_pred chHHHHHHHHHhc-CCCeEEEEEecccHHHHHHhhcC---C-----CccEEEEecCCCCCc--ccc-ccccccEEEeecC
Q 025842 109 VDAKSVIAALKSK-GVSAIGAAGFCWGGVVAAKLASS---H-----DIQAAVVLHPGAITV--DDI-NEIKVPVAILGAE 176 (247)
Q Consensus 109 ~d~~~~i~~l~~~-~~~~i~l~G~S~Gg~~a~~~a~~---~-----~i~~~v~~~~~~~~~--~~~-~~~~~P~l~i~g~ 176 (247)
.++...++..... +..+|+|+|+|+|+.++..++.. . +|.++++|+-..... ..+ ....-.++-++-.
T Consensus 65 ~~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP~~~~~~~~~~~~~~~~~~~~C~~ 144 (179)
T PF01083_consen 65 ANLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDPRRGAGQPGIPGDYSDRVRSYCNP 144 (179)
T ss_dssp HHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-TTTBTTTTTBTCSCGGGEEEE-BT
T ss_pred HHHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEEecCCcccCCccccCcccccceeEEcCC
Confidence 3444444443333 66799999999999999997644 1 888888887433211 111 1233457777777
Q ss_pred CCCCC
Q 025842 177 IDHVS 181 (247)
Q Consensus 177 ~D~~~ 181 (247)
.|.+|
T Consensus 145 gD~vC 149 (179)
T PF01083_consen 145 GDPVC 149 (179)
T ss_dssp T-GGG
T ss_pred CCccc
Confidence 78777
No 204
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=95.72 E-value=0.051 Score=46.25 Aligned_cols=112 Identities=16% Similarity=0.081 Sum_probs=71.1
Q ss_pred CCeEEEEEcCccCCCcchH-----HHHHHHHHhcCcEEEEeccC-CCCCccCCCCcccchHHHHhhcCCccccchHHHHH
Q 025842 42 SKSAILLISDVFGYEAPLF-----RKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVI 115 (247)
Q Consensus 42 ~~~~vv~~hgg~g~~~~~~-----~~~a~~la~~G~~v~~~d~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i 115 (247)
+..||.++-||-|.-...| ..+...-.+.|-.|+..++| .|++. |...... .. .+..+..+...|+..+|
T Consensus 84 ~~gPiFLmIGGEgp~~~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~--P~~~~st-~n-lk~LSs~QALaDla~fI 159 (514)
T KOG2182|consen 84 PGGPIFLMIGGEGPESDKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSS--PIGDLST-SN-LKYLSSLQALADLAEFI 159 (514)
T ss_pred CCCceEEEEcCCCCCCCCccccCcchHHHHHHHhCCeeEEeeeeccccCC--CCCCCcc-cc-hhhhhHHHHHHHHHHHH
Confidence 4455666665665322112 12222233459999999999 99876 3332222 11 44556677789999999
Q ss_pred HHHHhc----CCCeEEEEEecccHHHHHHhhcC-C-CccEEEEecCCC
Q 025842 116 AALKSK----GVSAIGAAGFCWGGVVAAKLASS-H-DIQAAVVLHPGA 157 (247)
Q Consensus 116 ~~l~~~----~~~~i~l~G~S~Gg~~a~~~a~~-~-~i~~~v~~~~~~ 157 (247)
+.+... +..+++.+|-|.-|.++...=.. | .+.+.|+.++..
T Consensus 160 ~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSapv 207 (514)
T KOG2182|consen 160 KAMNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAPV 207 (514)
T ss_pred HHHHhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeecccccce
Confidence 988876 23499999999999988775544 3 566666655544
No 205
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=95.40 E-value=0.058 Score=41.92 Aligned_cols=33 Identities=21% Similarity=0.182 Sum_probs=23.6
Q ss_pred hHHHHHHHHHh-cCCCeEEEEEecccHHHHHHhh
Q 025842 110 DAKSVIAALKS-KGVSAIGAAGFCWGGVVAAKLA 142 (247)
Q Consensus 110 d~~~~i~~l~~-~~~~~i~l~G~S~Gg~~a~~~a 142 (247)
++...++.+.+ .+..+|.+.|||+||.+|..++
T Consensus 113 ~~~~~~~~~~~~~p~~~i~vtGHSLGGaiA~l~a 146 (229)
T cd00519 113 QVLPELKSALKQYPDYKIIVTGHSLGGALASLLA 146 (229)
T ss_pred HHHHHHHHHHhhCCCceEEEEccCHHHHHHHHHH
Confidence 34444444433 3557999999999999999876
No 206
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=95.34 E-value=0.32 Score=38.62 Aligned_cols=50 Identities=22% Similarity=0.360 Sum_probs=37.4
Q ss_pred cchHHHHHHHHHhc-CCCeEEEEEecccHHHHHHhhcCCCccEEEEecCCC
Q 025842 108 YVDAKSVIAALKSK-GVSAIGAAGFCWGGVVAAKLASSHDIQAAVVLHPGA 157 (247)
Q Consensus 108 ~~d~~~~i~~l~~~-~~~~i~l~G~S~Gg~~a~~~a~~~~i~~~v~~~~~~ 157 (247)
..++.+++..+++. ...+|.+.|||+||.+|..+.....+-.+..-+|.-
T Consensus 259 ySa~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fglP~VaFesPGd 309 (425)
T COG5153 259 YSAALDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFGLPVVAFESPGD 309 (425)
T ss_pred hHHHHHHHHHHHHhCCCceEEEeccccchHHHHHhccccCCceEEecCchh
Confidence 34555555555555 456999999999999999999888777766666543
No 207
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=95.34 E-value=0.32 Score=38.62 Aligned_cols=50 Identities=22% Similarity=0.360 Sum_probs=37.4
Q ss_pred cchHHHHHHHHHhc-CCCeEEEEEecccHHHHHHhhcCCCccEEEEecCCC
Q 025842 108 YVDAKSVIAALKSK-GVSAIGAAGFCWGGVVAAKLASSHDIQAAVVLHPGA 157 (247)
Q Consensus 108 ~~d~~~~i~~l~~~-~~~~i~l~G~S~Gg~~a~~~a~~~~i~~~v~~~~~~ 157 (247)
..++.+++..+++. ...+|.+.|||+||.+|..+.....+-.+..-+|.-
T Consensus 259 ySa~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fglP~VaFesPGd 309 (425)
T KOG4540|consen 259 YSAALDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFGLPVVAFESPGD 309 (425)
T ss_pred hHHHHHHHHHHHHhCCCceEEEeccccchHHHHHhccccCCceEEecCchh
Confidence 34555555555555 456999999999999999999888777766666543
No 208
>PLN02847 triacylglycerol lipase
Probab=95.09 E-value=0.065 Score=46.87 Aligned_cols=69 Identities=20% Similarity=0.264 Sum_probs=38.5
Q ss_pred cCCCeEEEEEecccHHHHHHhhc---C-CCcc--EEEEecCCCCCcccccccccc--EEEeecCCCCCCC---HHHHHHH
Q 025842 121 KGVSAIGAAGFCWGGVVAAKLAS---S-HDIQ--AAVVLHPGAITVDDINEIKVP--VAILGAEIDHVSP---PEDLKRF 189 (247)
Q Consensus 121 ~~~~~i~l~G~S~Gg~~a~~~a~---~-~~i~--~~v~~~~~~~~~~~~~~~~~P--~l~i~g~~D~~~~---~~~~~~~ 189 (247)
.+.-++.++|||+||.+|..++. . +.+. .++.|+|.......+.....+ +-++++ |++|| ....+.+
T Consensus 248 ~PdYkLVITGHSLGGGVAALLAilLRe~~~fssi~CyAFgPp~cvS~eLAe~~k~fVTSVVng--~DIVPRLS~~Sl~dL 325 (633)
T PLN02847 248 YPDFKIKIVGHSLGGGTAALLTYILREQKEFSSTTCVTFAPAACMTWDLAESGKHFITTIING--SDLVPTFSAASVDDL 325 (633)
T ss_pred CCCCeEEEeccChHHHHHHHHHHHHhcCCCCCCceEEEecCchhcCHHHHHHhhhheEEEEeC--CCCCccCCHHHHHHH
Confidence 34459999999999999998762 1 2222 366677644333333333333 334444 44444 4444444
Q ss_pred HH
Q 025842 190 GE 191 (247)
Q Consensus 190 ~~ 191 (247)
..
T Consensus 326 R~ 327 (633)
T PLN02847 326 RS 327 (633)
T ss_pred HH
Confidence 43
No 209
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=94.74 E-value=0.28 Score=40.47 Aligned_cols=105 Identities=22% Similarity=0.303 Sum_probs=64.2
Q ss_pred eecCceEEEeec--C-CC--CCCeEEEEEcCccCCCcchHHHHHHHHHhc---C------cEEEEeccC-CCCCccCCCC
Q 025842 26 QLGGLNTYVTGS--G-PP--DSKSAILLISDVFGYEAPLFRKLADKVAGA---G------FLVVAPDFF-YGDPIVDLNN 90 (247)
Q Consensus 26 ~~~~~~~~~~~p--~-~~--~~~~~vv~~hgg~g~~~~~~~~~a~~la~~---G------~~v~~~d~~-~g~~~~~~~~ 90 (247)
.+.|+..+...- + .+ ...-|++++||+.|+- ..+..+...|.+- | |.|++|..+ .|-|. .+..
T Consensus 130 eIeGL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv-~EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd-~~sk 207 (469)
T KOG2565|consen 130 EIEGLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSV-REFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSD-APSK 207 (469)
T ss_pred hhcceeEEEEEecCCccccCCcccceEEecCCCchH-HHHHhhhhhhcCccccCCccceeEEEeccCCCCcccCc-CCcc
Confidence 567777666541 1 11 2235799999888864 3444666667543 3 899999996 44443 2322
Q ss_pred cccchHHHHhhcCCccccchHHHHHHHHHhcCCCeEEEEEecccHHHHHHhhcC
Q 025842 91 PQFDREAWRKIHNTDKGYVDAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLASS 144 (247)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~ 144 (247)
.+.... +-+.-+-+.+..++.++..+=|--+|..++..+|..
T Consensus 208 ~GFn~~------------a~ArvmrkLMlRLg~nkffiqGgDwGSiI~snlasL 249 (469)
T KOG2565|consen 208 TGFNAA------------ATARVMRKLMLRLGYNKFFIQGGDWGSIIGSNLASL 249 (469)
T ss_pred CCccHH------------HHHHHHHHHHHHhCcceeEeecCchHHHHHHHHHhh
Confidence 222211 111122233444588999999999999999998853
No 210
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=94.39 E-value=0.087 Score=39.39 Aligned_cols=86 Identities=12% Similarity=0.110 Sum_probs=57.3
Q ss_pred cEEEEecCCCCCccccccccccEEEeecCCCCCCCHHHHHHHHHHHHhccCCCeeEEEeCCCCccccccCCCCChHHHHH
Q 025842 148 QAAVVLHPGAITVDDINEIKVPVAILGAEIDHVSPPEDLKRFGEILSAKLKNDCLVKIYPRVSHGWTVRYNVEDEFAVKS 227 (247)
Q Consensus 148 ~~~v~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~ 227 (247)
++-..+.+-......+ -++++|-|-|+.|+++.........+.+..-+......++.+|+||.-...+. ..
T Consensus 117 ~G~~~~~Gr~Vdp~aI--~~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~-------rw 187 (202)
T PF06850_consen 117 RGTWTVRGRPVDPAAI--RRTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGS-------RW 187 (202)
T ss_pred CCceEECCEEcchHHc--ccceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccch-------hh
Confidence 3334444433333333 25788999999999998888777766653223335677888999996544443 25
Q ss_pred HHHHHHHHHHHHHHH
Q 025842 228 AEEAHEDMINWLTKY 242 (247)
Q Consensus 228 ~~~~~~~~~~fl~~~ 242 (247)
.++.+..+.+|+.++
T Consensus 188 r~~I~P~i~~fi~~~ 202 (202)
T PF06850_consen 188 REEIYPRIREFIRQH 202 (202)
T ss_pred hhhhhHHHHHHHHhC
Confidence 788899999998764
No 211
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=94.31 E-value=0.089 Score=44.57 Aligned_cols=70 Identities=14% Similarity=0.184 Sum_probs=44.8
Q ss_pred hHHHHHHHHHhcCcE------EEEeccCCCCCccCCCCcccchHHHHhhcCCccccchHHHHHHHHHhc-CCCeEEEEEe
Q 025842 59 LFRKLADKVAGAGFL------VVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSK-GVSAIGAAGF 131 (247)
Q Consensus 59 ~~~~~a~~la~~G~~------v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~-~~~~i~l~G~ 131 (247)
.|..+.+.|+.-||. -+.+|.|.+... ++ ..++....++..|+...+. +.+||.+++|
T Consensus 125 ~w~~~i~~lv~~GYe~~~~l~ga~YDwRls~~~--~e-------------~rd~yl~kLK~~iE~~~~~~G~kkVvlisH 189 (473)
T KOG2369|consen 125 YWHELIENLVGIGYERGKTLFGAPYDWRLSYHN--SE-------------ERDQYLSKLKKKIETMYKLNGGKKVVLISH 189 (473)
T ss_pred HHHHHHHHHHhhCcccCceeeccccchhhccCC--hh-------------HHHHHHHHHHHHHHHHHHHcCCCceEEEec
Confidence 456788888887876 333444311110 10 1122235677777777766 5589999999
Q ss_pred cccHHHHHHhhc
Q 025842 132 CWGGVVAAKLAS 143 (247)
Q Consensus 132 S~Gg~~a~~~a~ 143 (247)
|||+.+.+....
T Consensus 190 SMG~l~~lyFl~ 201 (473)
T KOG2369|consen 190 SMGGLYVLYFLK 201 (473)
T ss_pred CCccHHHHHHHh
Confidence 999999998663
No 212
>PLN02454 triacylglycerol lipase
Probab=94.23 E-value=0.058 Score=45.35 Aligned_cols=34 Identities=21% Similarity=0.176 Sum_probs=24.7
Q ss_pred chHHHHHHHHHhc-CCC--eEEEEEecccHHHHHHhh
Q 025842 109 VDAKSVIAALKSK-GVS--AIGAAGFCWGGVVAAKLA 142 (247)
Q Consensus 109 ~d~~~~i~~l~~~-~~~--~i~l~G~S~Gg~~a~~~a 142 (247)
+++...|+.+.+. ... +|.+.|||+||.+|..+|
T Consensus 210 ~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA 246 (414)
T PLN02454 210 SQLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAA 246 (414)
T ss_pred HHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHH
Confidence 4555556555554 222 599999999999999987
No 213
>PLN02310 triacylglycerol lipase
Probab=94.15 E-value=0.041 Score=46.13 Aligned_cols=60 Identities=20% Similarity=0.249 Sum_probs=35.9
Q ss_pred CeEEEEEecccHHHHHHhhcC-----CCc-cEEEEecCCCCCccc----cccccccEEEeecCCCCC--CCH
Q 025842 124 SAIGAAGFCWGGVVAAKLASS-----HDI-QAAVVLHPGAITVDD----INEIKVPVAILGAEIDHV--SPP 183 (247)
Q Consensus 124 ~~i~l~G~S~Gg~~a~~~a~~-----~~i-~~~v~~~~~~~~~~~----~~~~~~P~l~i~g~~D~~--~~~ 183 (247)
.+|.+.|||+||.+|..+|.. +.+ -.++.|+........ +.+....++=+.-..|.+ +|+
T Consensus 209 ~sI~vTGHSLGGALAtLaA~dl~~~~~~~~v~vyTFGsPRVGN~~Fa~~~~~~~~~~~RVvn~~DiVP~lPp 280 (405)
T PLN02310 209 VSLTVTGHSLGGALALLNAYEAATTIPDLFVSVISFGAPRVGNIAFKEKLNELGVKTLRVVVKQDKVPKLPG 280 (405)
T ss_pred ceEEEEcccHHHHHHHHHHHHHHHhCcCcceeEEEecCCCcccHHHHHHHHhcCCCEEEEEECCCccCccCc
Confidence 489999999999999987732 121 224445544333222 233345566666667855 565
No 214
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=94.10 E-value=0.35 Score=36.79 Aligned_cols=35 Identities=11% Similarity=0.244 Sum_probs=27.5
Q ss_pred CCCeEEEEEecccHHHHHHhhcCC----CccEEEEecCC
Q 025842 122 GVSAIGAAGFCWGGVVAAKLASSH----DIQAAVVLHPG 156 (247)
Q Consensus 122 ~~~~i~l~G~S~Gg~~a~~~a~~~----~i~~~v~~~~~ 156 (247)
....++++.||.||..++.+..+. +|.++.+....
T Consensus 188 ~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~ 226 (297)
T KOG3967|consen 188 KAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSA 226 (297)
T ss_pred CcceEEEEEeccCChhHHHHHHhcCCccceEEEEeeccc
Confidence 567999999999999999988432 67777665544
No 215
>PLN03037 lipase class 3 family protein; Provisional
Probab=94.04 E-value=0.041 Score=47.35 Aligned_cols=77 Identities=19% Similarity=0.202 Sum_probs=43.7
Q ss_pred chHHHHHHHHHhcC-CCeEEEEEecccHHHHHHhhcC-----CC--ccEEEEecCCCCCcc----ccccccccEEEeecC
Q 025842 109 VDAKSVIAALKSKG-VSAIGAAGFCWGGVVAAKLASS-----HD--IQAAVVLHPGAITVD----DINEIKVPVAILGAE 176 (247)
Q Consensus 109 ~d~~~~i~~l~~~~-~~~i~l~G~S~Gg~~a~~~a~~-----~~--i~~~v~~~~~~~~~~----~~~~~~~P~l~i~g~ 176 (247)
+++..+++..++.+ ..+|.+.|||+||.+|...|.+ +. ...++.|+....... .+......++=+.-.
T Consensus 302 ~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~DIa~~~p~~~~VtvyTFGsPRVGN~aFA~~~~~l~~~~lRVVN~ 381 (525)
T PLN03037 302 EEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYEAARSVPALSNISVISFGAPRVGNLAFKEKLNELGVKVLRVVNK 381 (525)
T ss_pred HHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHHHHHhCCCCCCeeEEEecCCCccCHHHHHHHHhcCCCEEEEEEC
Confidence 34444444443332 2489999999999999987722 22 223344443332222 233345667777777
Q ss_pred CCCC--CCHHH
Q 025842 177 IDHV--SPPED 185 (247)
Q Consensus 177 ~D~~--~~~~~ 185 (247)
.|.+ +|...
T Consensus 382 ~DiVP~lPp~~ 392 (525)
T PLN03037 382 QDIVPKLPGII 392 (525)
T ss_pred CCccccCCchh
Confidence 8865 66543
No 216
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=93.78 E-value=0.32 Score=41.30 Aligned_cols=104 Identities=16% Similarity=0.122 Sum_probs=54.7
Q ss_pred CCCeEEEEEcCccCCCcchHHHHHHHHHhc----------------------CcEEEEeccC--CCCCccCCCCcccchH
Q 025842 41 DSKSAILLISDVFGYEAPLFRKLADKVAGA----------------------GFLVVAPDFF--YGDPIVDLNNPQFDRE 96 (247)
Q Consensus 41 ~~~~~vv~~hgg~g~~~~~~~~~a~~la~~----------------------G~~v~~~d~~--~g~~~~~~~~~~~~~~ 96 (247)
...|.||++.||.|+++.. -.|.+. -..++.+|.+ -|.|. ......
T Consensus 38 ~~~Pl~~wlnGGPG~SS~~-----g~f~e~GP~~~~~~~~~~l~~n~~sW~~~an~l~iD~PvGtGfS~--~~~~~~--- 107 (415)
T PF00450_consen 38 EDDPLILWLNGGPGCSSMW-----GLFGENGPFRINPDGPYTLEDNPYSWNKFANLLFIDQPVGTGFSY--GNDPSD--- 107 (415)
T ss_dssp CSS-EEEEEE-TTTB-THH-----HHHCTTSSEEEETTSTSEEEE-TT-GGGTSEEEEE--STTSTT-E--ESSGGG---
T ss_pred CCccEEEEecCCceecccc-----ccccccCceEEeecccccccccccccccccceEEEeecCceEEee--cccccc---
Confidence 4578899999999975432 112222 2667777876 34443 111110
Q ss_pred HHHhhcCCccccchHHHHHHH-HHhc---CCCeEEEEEecccHHHHHHhhc-----C------C-CccEEEEecCCC
Q 025842 97 AWRKIHNTDKGYVDAKSVIAA-LKSK---GVSAIGAAGFCWGGVVAAKLAS-----S------H-DIQAAVVLHPGA 157 (247)
Q Consensus 97 ~~~~~~~~~~~~~d~~~~i~~-l~~~---~~~~i~l~G~S~Gg~~a~~~a~-----~------~-~i~~~v~~~~~~ 157 (247)
...+.+..++|+..++.. +... ...++.|.|-|.||..+-.+|. . . .++++++.+|..
T Consensus 108 ---~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi~IGng~~ 181 (415)
T PF00450_consen 108 ---YVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGIAIGNGWI 181 (415)
T ss_dssp ---GS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEEEEESE-S
T ss_pred ---ccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccccccccccccceecCccc
Confidence 001112223444444432 2222 3459999999999999777651 1 2 689999999887
No 217
>PLN00413 triacylglycerol lipase
Probab=93.78 E-value=0.093 Score=44.76 Aligned_cols=40 Identities=13% Similarity=0.224 Sum_probs=27.5
Q ss_pred HhcCCCeEEEEEecccHHHHHHhhcC----------CCccEEEEecCCCC
Q 025842 119 KSKGVSAIGAAGFCWGGVVAAKLASS----------HDIQAAVVLHPGAI 158 (247)
Q Consensus 119 ~~~~~~~i~l~G~S~Gg~~a~~~a~~----------~~i~~~v~~~~~~~ 158 (247)
.+.+..++.+.|||+||.+|..+|.. .++..+..++....
T Consensus 279 ~~~p~~kliVTGHSLGGALAtLaA~~L~~~~~~~~~~ri~~VYTFG~PRV 328 (479)
T PLN00413 279 DQNPTSKFILSGHSLGGALAILFTAVLIMHDEEEMLERLEGVYTFGQPRV 328 (479)
T ss_pred HHCCCCeEEEEecCHHHHHHHHHHHHHHhccchhhccccceEEEeCCCCC
Confidence 33456799999999999999987621 13445666665443
No 218
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=93.27 E-value=0.28 Score=40.92 Aligned_cols=89 Identities=17% Similarity=0.192 Sum_probs=45.4
Q ss_pred CCCCeEEEEEcCccCCCcchHHHHHHHHHhc--CcEEEEeccCCCCCccCCCCcccchHHHHhhcCCccccchHHHHHHH
Q 025842 40 PDSKSAILLISDVFGYEAPLFRKLADKVAGA--GFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAA 117 (247)
Q Consensus 40 ~~~~~~vv~~hgg~g~~~~~~~~~a~~la~~--G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~ 117 (247)
.++.-.||+.||..+.+...|...+...... ++.++.-.+. +... ....+..+..| ......++.
T Consensus 77 ~k~~HLvVlthGi~~~~~~~~~~~~~~~~kk~p~~~iv~~g~~-~~~~--~T~~Gv~~lG~----------Rla~~~~e~ 143 (405)
T KOG4372|consen 77 TKPKHLVVLTHGLHGADMEYWKEKIEQMTKKMPDKLIVVRGKM-NNMC--QTFDGVDVLGE----------RLAEEVKET 143 (405)
T ss_pred cCCceEEEeccccccccHHHHHHHHHhhhcCCCcceEeeeccc-cchh--hccccceeeec----------ccHHHHhhh
Confidence 4455678999988784445555555555443 4433333332 2111 00111111111 122223333
Q ss_pred HHhcCCCeEEEEEecccHHHHHHh
Q 025842 118 LKSKGVSAIGAAGFCWGGVVAAKL 141 (247)
Q Consensus 118 l~~~~~~~i~l~G~S~Gg~~a~~~ 141 (247)
+.....++|.++|||+||.++-.+
T Consensus 144 ~~~~si~kISfvghSLGGLvar~A 167 (405)
T KOG4372|consen 144 LYDYSIEKISFVGHSLGGLVARYA 167 (405)
T ss_pred hhccccceeeeeeeecCCeeeeEE
Confidence 333346799999999999876553
No 219
>PLN02162 triacylglycerol lipase
Probab=93.16 E-value=0.12 Score=43.96 Aligned_cols=23 Identities=22% Similarity=0.219 Sum_probs=19.3
Q ss_pred hcCCCeEEEEEecccHHHHHHhh
Q 025842 120 SKGVSAIGAAGFCWGGVVAAKLA 142 (247)
Q Consensus 120 ~~~~~~i~l~G~S~Gg~~a~~~a 142 (247)
+.+..++.+.|||+||.+|..+|
T Consensus 274 k~p~~kliVTGHSLGGALAtLaA 296 (475)
T PLN02162 274 RNKNLKYILTGHSLGGALAALFP 296 (475)
T ss_pred hCCCceEEEEecChHHHHHHHHH
Confidence 34556999999999999998865
No 220
>PLN02934 triacylglycerol lipase
Probab=92.87 E-value=0.15 Score=43.90 Aligned_cols=32 Identities=19% Similarity=0.293 Sum_probs=23.1
Q ss_pred HHHHHHHHHh-cCCCeEEEEEecccHHHHHHhh
Q 025842 111 AKSVIAALKS-KGVSAIGAAGFCWGGVVAAKLA 142 (247)
Q Consensus 111 ~~~~i~~l~~-~~~~~i~l~G~S~Gg~~a~~~a 142 (247)
+...++.+.+ .+..++.+.|||+||.+|..++
T Consensus 307 v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA 339 (515)
T PLN02934 307 VRSKLKSLLKEHKNAKFVVTGHSLGGALAILFP 339 (515)
T ss_pred HHHHHHHHHHHCCCCeEEEeccccHHHHHHHHH
Confidence 3444443333 3556999999999999999876
No 221
>PLN02571 triacylglycerol lipase
Probab=92.70 E-value=0.14 Score=43.15 Aligned_cols=18 Identities=28% Similarity=0.351 Sum_probs=16.8
Q ss_pred eEEEEEecccHHHHHHhh
Q 025842 125 AIGAAGFCWGGVVAAKLA 142 (247)
Q Consensus 125 ~i~l~G~S~Gg~~a~~~a 142 (247)
+|.+.|||+||.+|..+|
T Consensus 227 sI~VTGHSLGGALAtLaA 244 (413)
T PLN02571 227 SITICGHSLGAALATLNA 244 (413)
T ss_pred cEEEeccchHHHHHHHHH
Confidence 799999999999999876
No 222
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=92.69 E-value=0.12 Score=44.03 Aligned_cols=102 Identities=14% Similarity=0.080 Sum_probs=58.9
Q ss_pred eEEEEEcCcc--CCCcchHHHHHHHHHhc-CcEEEEeccCC---CCCcc--CCCCcccchHHHHhhcCCccccchHHHHH
Q 025842 44 SAILLISDVF--GYEAPLFRKLADKVAGA-GFLVVAPDFFY---GDPIV--DLNNPQFDREAWRKIHNTDKGYVDAKSVI 115 (247)
Q Consensus 44 ~~vv~~hgg~--g~~~~~~~~~a~~la~~-G~~v~~~d~~~---g~~~~--~~~~~~~~~~~~~~~~~~~~~~~d~~~~i 115 (247)
..+|.+.||. .++...-..-.+.|+.. ...|+.++||- |.-.. .++.++ .+.- -|-.-++
T Consensus 136 tVlVWiyGGGF~sGt~SLdvYdGk~la~~envIvVs~NYRvG~FGFL~l~~~~eaPG-NmGl-----------~DQqLAl 203 (601)
T KOG4389|consen 136 TVLVWIYGGGFYSGTPSLDVYDGKFLAAVENVIVVSMNYRVGAFGFLYLPGHPEAPG-NMGL-----------LDQQLAL 203 (601)
T ss_pred eEEEEEEcCccccCCcceeeeccceeeeeccEEEEEeeeeeccceEEecCCCCCCCC-ccch-----------HHHHHHH
Confidence 3556666432 12222222344566654 58888899982 32110 111111 1111 3555778
Q ss_pred HHHHhc------CCCeEEEEEecccHHHHHH-hhc---CCCccEEEEecCCC
Q 025842 116 AALKSK------GVSAIGAAGFCWGGVVAAK-LAS---SHDIQAAVVLHPGA 157 (247)
Q Consensus 116 ~~l~~~------~~~~i~l~G~S~Gg~~a~~-~a~---~~~i~~~v~~~~~~ 157 (247)
+|++++ ++++|.|+|-|.|+..... +.. +.-++.+|+-+++.
T Consensus 204 ~WV~~Ni~aFGGnp~~vTLFGESAGaASv~aHLlsP~S~glF~raIlQSGS~ 255 (601)
T KOG4389|consen 204 QWVQENIAAFGGNPSRVTLFGESAGAASVVAHLLSPGSRGLFHRAILQSGSL 255 (601)
T ss_pred HHHHHhHHHhCCCcceEEEeccccchhhhhheecCCCchhhHHHHHhhcCCC
Confidence 899886 5689999999999987655 332 22677788877776
No 223
>PLN02408 phospholipase A1
Probab=92.45 E-value=0.17 Score=42.01 Aligned_cols=56 Identities=11% Similarity=0.124 Sum_probs=32.3
Q ss_pred eEEEEEecccHHHHHHhhcC----C---CccEEEEecCCCCCccc----cccccccEEEeecCCCCC
Q 025842 125 AIGAAGFCWGGVVAAKLASS----H---DIQAAVVLHPGAITVDD----INEIKVPVAILGAEIDHV 180 (247)
Q Consensus 125 ~i~l~G~S~Gg~~a~~~a~~----~---~i~~~v~~~~~~~~~~~----~~~~~~P~l~i~g~~D~~ 180 (247)
+|.+.|||+||.+|..+|.. . ..-.++.|+........ +......++=+.-..|.+
T Consensus 201 sI~vTGHSLGGALAtLaA~dl~~~~~~~~~V~v~tFGsPRVGN~~Fa~~~~~~~~~~lRVvN~~D~V 267 (365)
T PLN02408 201 SLTITGHSLGAALATLTAYDIKTTFKRAPMVTVISFGGPRVGNRSFRRQLEKQGTKVLRIVNSDDVI 267 (365)
T ss_pred eEEEeccchHHHHHHHHHHHHHHhcCCCCceEEEEcCCCCcccHHHHHHHHhcCCcEEEEEeCCCCc
Confidence 69999999999999997732 1 12224445443332222 222334555555666654
No 224
>PLN02324 triacylglycerol lipase
Probab=91.98 E-value=0.19 Score=42.25 Aligned_cols=19 Identities=26% Similarity=0.316 Sum_probs=17.2
Q ss_pred CeEEEEEecccHHHHHHhh
Q 025842 124 SAIGAAGFCWGGVVAAKLA 142 (247)
Q Consensus 124 ~~i~l~G~S~Gg~~a~~~a 142 (247)
-+|.+.|||+||.+|..+|
T Consensus 215 ~sItvTGHSLGGALAtLaA 233 (415)
T PLN02324 215 ISITFTGHSLGAVMSVLSA 233 (415)
T ss_pred ceEEEecCcHHHHHHHHHH
Confidence 3799999999999999876
No 225
>PLN02719 triacylglycerol lipase
Probab=91.79 E-value=0.21 Score=43.11 Aligned_cols=19 Identities=32% Similarity=0.427 Sum_probs=17.4
Q ss_pred CeEEEEEecccHHHHHHhh
Q 025842 124 SAIGAAGFCWGGVVAAKLA 142 (247)
Q Consensus 124 ~~i~l~G~S~Gg~~a~~~a 142 (247)
-+|.+.|||+||.+|..+|
T Consensus 298 ~sItVTGHSLGGALAtLaA 316 (518)
T PLN02719 298 LSITVTGHSLGGALAVLSA 316 (518)
T ss_pred ceEEEecCcHHHHHHHHHH
Confidence 3899999999999999977
No 226
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=91.65 E-value=0.47 Score=34.36 Aligned_cols=33 Identities=15% Similarity=0.223 Sum_probs=27.9
Q ss_pred eEEEEEecccHHHHHHhhcCCCccEEEEecCCC
Q 025842 125 AIGAAGFCWGGVVAAKLASSHDIQAAVVLHPGA 157 (247)
Q Consensus 125 ~i~l~G~S~Gg~~a~~~a~~~~i~~~v~~~~~~ 157 (247)
.|-++.+|||-.+|-.+...-+++..+++++..
T Consensus 58 hirlvAwSMGVwvAeR~lqg~~lksatAiNGTg 90 (214)
T COG2830 58 HIRLVAWSMGVWVAERVLQGIRLKSATAINGTG 90 (214)
T ss_pred hhhhhhhhHHHHHHHHHHhhccccceeeecCCC
Confidence 556889999999999998888888888888765
No 227
>PLN02802 triacylglycerol lipase
Probab=91.32 E-value=0.26 Score=42.50 Aligned_cols=19 Identities=26% Similarity=0.366 Sum_probs=17.3
Q ss_pred CeEEEEEecccHHHHHHhh
Q 025842 124 SAIGAAGFCWGGVVAAKLA 142 (247)
Q Consensus 124 ~~i~l~G~S~Gg~~a~~~a 142 (247)
.+|.+.|||+||.+|..+|
T Consensus 330 ~sI~VTGHSLGGALAtLaA 348 (509)
T PLN02802 330 LSITVTGHSLGAALALLVA 348 (509)
T ss_pred ceEEEeccchHHHHHHHHH
Confidence 3799999999999999877
No 228
>PLN02753 triacylglycerol lipase
Probab=91.24 E-value=0.26 Score=42.70 Aligned_cols=19 Identities=32% Similarity=0.412 Sum_probs=17.7
Q ss_pred CeEEEEEecccHHHHHHhh
Q 025842 124 SAIGAAGFCWGGVVAAKLA 142 (247)
Q Consensus 124 ~~i~l~G~S~Gg~~a~~~a 142 (247)
-+|.+.|||+||.+|..+|
T Consensus 312 ~sItVTGHSLGGALAtLaA 330 (531)
T PLN02753 312 LSITVTGHSLGGALAILSA 330 (531)
T ss_pred ceEEEEccCHHHHHHHHHH
Confidence 5999999999999999977
No 229
>PF03283 PAE: Pectinacetylesterase
Probab=90.78 E-value=0.54 Score=39.28 Aligned_cols=34 Identities=24% Similarity=0.196 Sum_probs=28.8
Q ss_pred chHHHHHHHHHhc---CCCeEEEEEecccHHHHHHhh
Q 025842 109 VDAKSVIAALKSK---GVSAIGAAGFCWGGVVAAKLA 142 (247)
Q Consensus 109 ~d~~~~i~~l~~~---~~~~i~l~G~S~Gg~~a~~~a 142 (247)
..+++++++|... ..++|.|.|.|.||..++..+
T Consensus 138 ~i~~avl~~l~~~gl~~a~~vlltG~SAGG~g~~~~~ 174 (361)
T PF03283_consen 138 RILRAVLDDLLSNGLPNAKQVLLTGCSAGGLGAILHA 174 (361)
T ss_pred HHHHHHHHHHHHhcCcccceEEEeccChHHHHHHHHH
Confidence 5688899988876 357999999999999999855
No 230
>PLN02761 lipase class 3 family protein
Probab=90.57 E-value=0.2 Score=43.25 Aligned_cols=19 Identities=26% Similarity=0.291 Sum_probs=17.3
Q ss_pred CeEEEEEecccHHHHHHhh
Q 025842 124 SAIGAAGFCWGGVVAAKLA 142 (247)
Q Consensus 124 ~~i~l~G~S~Gg~~a~~~a 142 (247)
-+|.+.|||+||.+|...|
T Consensus 294 ~sItVTGHSLGGALAtLaA 312 (527)
T PLN02761 294 ISITVTGHSLGASLALVSA 312 (527)
T ss_pred ceEEEeccchHHHHHHHHH
Confidence 3899999999999999876
No 231
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=88.54 E-value=0.59 Score=38.70 Aligned_cols=33 Identities=21% Similarity=0.203 Sum_probs=23.5
Q ss_pred hHHHHHHHHHhc-CCCeEEEEEecccHHHHHHhh
Q 025842 110 DAKSVIAALKSK-GVSAIGAAGFCWGGVVAAKLA 142 (247)
Q Consensus 110 d~~~~i~~l~~~-~~~~i~l~G~S~Gg~~a~~~a 142 (247)
.+.+.++.|.+. ..-+|.+.|||+||.+|..+|
T Consensus 156 ~~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa 189 (336)
T KOG4569|consen 156 GLDAELRRLIELYPNYSIWVTGHSLGGALASLAA 189 (336)
T ss_pred HHHHHHHHHHHhcCCcEEEEecCChHHHHHHHHH
Confidence 344444444433 345999999999999999877
No 232
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=87.81 E-value=9.7 Score=31.19 Aligned_cols=35 Identities=26% Similarity=0.179 Sum_probs=28.9
Q ss_pred cchHHHHHHHHHhc--CCCeEEEEEecccHHHHHHhh
Q 025842 108 YVDAKSVIAALKSK--GVSAIGAAGFCWGGVVAAKLA 142 (247)
Q Consensus 108 ~~d~~~~i~~l~~~--~~~~i~l~G~S~Gg~~a~~~a 142 (247)
.+.+..+..+|-.+ ..++|+++|+|-|+.++--+|
T Consensus 104 ~~nI~~AYrFL~~~yepGD~Iy~FGFSRGAf~aRVla 140 (423)
T COG3673 104 VQNIREAYRFLIFNYEPGDEIYAFGFSRGAFSARVLA 140 (423)
T ss_pred HHHHHHHHHHHHHhcCCCCeEEEeeccchhHHHHHHH
Confidence 36788888888876 568999999999999987665
No 233
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=86.05 E-value=1.7 Score=33.74 Aligned_cols=21 Identities=24% Similarity=0.373 Sum_probs=18.0
Q ss_pred CCCeEEEEEecccHHHHHHhh
Q 025842 122 GVSAIGAAGFCWGGVVAAKLA 142 (247)
Q Consensus 122 ~~~~i~l~G~S~Gg~~a~~~a 142 (247)
..+++.++|+|+|+.++...+
T Consensus 46 ~~~~vvV~GySQGA~Va~~~~ 66 (225)
T PF08237_consen 46 AGGPVVVFGYSQGAVVASNVL 66 (225)
T ss_pred CCCCEEEEEECHHHHHHHHHH
Confidence 457899999999999988755
No 234
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=85.28 E-value=18 Score=29.10 Aligned_cols=101 Identities=13% Similarity=0.088 Sum_probs=55.2
Q ss_pred eEEEEEcCccCCCcchHHHHHHHHHhcCcEEEEeccCCCCCccCCCCcccchHHHHhh-cCCccccc----hHHHHHHHH
Q 025842 44 SAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKI-HNTDKGYV----DAKSVIAAL 118 (247)
Q Consensus 44 ~~vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~----d~~~~i~~l 118 (247)
..||...-|.|+-......-.+.+..-...++++.|..=.|+ ... .+.+...+ -+.++.+++
T Consensus 34 ~lvV~~pTGtGWVdp~a~~a~E~l~~GD~A~va~QYSylPSw-------------~sfl~dr~~a~~a~~aL~~aV~~~~ 100 (289)
T PF10081_consen 34 VLVVATPTGTGWVDPWAVDALEYLYGGDVAIVAMQYSYLPSW-------------LSFLVDRDAAREAARALFEAVYARW 100 (289)
T ss_pred eEEEEcCCCCCccCHHHHhHHHHHhCCCeEEEEeccccccch-------------HHHhcccchHHHHHHHHHHHHHHHH
Confidence 445555556665434434444566555688888888311122 111 01111112 233444444
Q ss_pred HhcC---CCeEEEEEecccHHHHHHhhcC-----CCccEEEEecCCC
Q 025842 119 KSKG---VSAIGAAGFCWGGVVAAKLASS-----HDIQAAVVLHPGA 157 (247)
Q Consensus 119 ~~~~---~~~i~l~G~S~Gg~~a~~~a~~-----~~i~~~v~~~~~~ 157 (247)
.+.+ -.|+++.|-|+|++.+...-.. ..+.+++..+|..
T Consensus 101 ~~lP~~~RPkL~l~GeSLGa~g~~~af~~~~~~~~~vdGalw~GpP~ 147 (289)
T PF10081_consen 101 STLPEDRRPKLYLYGESLGAYGGEAAFDGLDDLRDRVDGALWVGPPF 147 (289)
T ss_pred HhCCcccCCeEEEeccCccccchhhhhccHHHhhhhcceEEEeCCCC
Confidence 4443 2499999999999887764321 2678777777654
No 235
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=84.77 E-value=2.4 Score=37.56 Aligned_cols=75 Identities=15% Similarity=-0.024 Sum_probs=46.2
Q ss_pred cccEEEeecCCCCCCCHHHHHHHHHHHHh-ccC--CCeeEEEeCCCCccccccC--CCCChHHH--HHHHHHHHHHHHHH
Q 025842 167 KVPVAILGAEIDHVSPPEDLKRFGEILSA-KLK--NDCLVKIYPRVSHGWTVRY--NVEDEFAV--KSAEEAHEDMINWL 239 (247)
Q Consensus 167 ~~P~l~i~g~~D~~~~~~~~~~~~~~l~~-~~~--~~~~~~~~~~~~H~~~~~~--~~~~~~~~--~~~~~~~~~~~~fl 239 (247)
..|++++||..|.++|.....+-+-.+-+ ..| ...++++++++.|.=..-. ....+.++ ....++.+.|-+||
T Consensus 555 GKPaIiVhGR~DaLlPvnh~Sr~Y~~ln~~~eG~~s~lrYyeV~naqHfDaf~~~pG~~~r~VPlh~Y~~qALd~M~a~L 634 (690)
T PF10605_consen 555 GKPAIIVHGRSDALLPVNHTSRPYLGLNRQVEGRASRLRYYEVTNAQHFDAFLDFPGFDTRFVPLHPYFFQALDLMWAHL 634 (690)
T ss_pred CCceEEEecccceecccCCCchHHHHHhhhhcccccceeEEEecCCeechhhccCCCCCcccccccHHHHHHHHHHHHHh
Confidence 57999999999999997776555444422 123 3678899999888432211 11222222 23556666666776
Q ss_pred HH
Q 025842 240 TK 241 (247)
Q Consensus 240 ~~ 241 (247)
+.
T Consensus 635 ~~ 636 (690)
T PF10605_consen 635 KS 636 (690)
T ss_pred hc
Confidence 54
No 236
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=84.65 E-value=9.2 Score=29.30 Aligned_cols=57 Identities=18% Similarity=0.215 Sum_probs=32.6
Q ss_pred CeEEEEEcCccCCCc-chHHHHHHHHHhcCc-EEEEeccCCCCCccCCCCcccchHHHHhhcCCccccchHHHHHHHHHh
Q 025842 43 KSAILLISDVFGYEA-PLFRKLADKVAGAGF-LVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKS 120 (247)
Q Consensus 43 ~~~vv~~hgg~g~~~-~~~~~~a~~la~~G~-~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~ 120 (247)
...|++.| |...++ ..+.-+-..|.+.|| .|++... .|. .++..+++++++
T Consensus 138 e~~vlmgH-Gt~h~s~~~YacLd~~~~~~~f~~v~v~~v-e~y-------------------------P~~d~vi~~l~~ 190 (265)
T COG4822 138 EILVLMGH-GTDHHSNAAYACLDHVLDEYGFDNVFVAAV-EGY-------------------------PLVDTVIEYLRK 190 (265)
T ss_pred eEEEEEec-CCCccHHHHHHHHHHHHHhcCCCceEEEEe-cCC-------------------------CcHHHHHHHHHH
Confidence 34445555 544322 223333445667888 5665555 344 346788999999
Q ss_pred cCCCeE
Q 025842 121 KGVSAI 126 (247)
Q Consensus 121 ~~~~~i 126 (247)
.+...+
T Consensus 191 ~~~~~v 196 (265)
T COG4822 191 NGIKEV 196 (265)
T ss_pred cCCceE
Confidence 865543
No 237
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=83.99 E-value=5.4 Score=34.59 Aligned_cols=40 Identities=23% Similarity=0.191 Sum_probs=28.6
Q ss_pred CCccccchHHHHHHHHHhc----C--CCeEEEEEecccHHHHHHhh
Q 025842 103 NTDKGYVDAKSVIAALKSK----G--VSAIGAAGFCWGGVVAAKLA 142 (247)
Q Consensus 103 ~~~~~~~d~~~~i~~l~~~----~--~~~i~l~G~S~Gg~~a~~~a 142 (247)
+....-+|+..+.+.+.+. . ..+++|+|-|.||.-+..+|
T Consensus 171 d~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A 216 (498)
T COG2939 171 DFEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFA 216 (498)
T ss_pred chhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHH
Confidence 3344457777776665543 3 34999999999999988876
No 238
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=83.01 E-value=1.9 Score=37.01 Aligned_cols=35 Identities=14% Similarity=0.310 Sum_probs=25.6
Q ss_pred CCeEEEEEecccHHHHHHhhc-----C-----C--CccEEEEecCCC
Q 025842 123 VSAIGAAGFCWGGVVAAKLAS-----S-----H--DIQAAVVLHPGA 157 (247)
Q Consensus 123 ~~~i~l~G~S~Gg~~a~~~a~-----~-----~--~i~~~v~~~~~~ 157 (247)
..++.+.|.|.||..+-.+|. + . .++++++-+|..
T Consensus 164 ~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~t 210 (433)
T PLN03016 164 SNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPVT 210 (433)
T ss_pred CCCEEEEccCccceehHHHHHHHHhhcccccCCcccceeeEecCCCc
Confidence 468999999999987766551 1 1 677888777654
No 239
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=82.79 E-value=4.9 Score=33.35 Aligned_cols=60 Identities=15% Similarity=0.148 Sum_probs=41.7
Q ss_pred CCCeEEEEEecccHHHHHHhh----cCC---CccEEEEecCCCCCc-cc---c-ccccccEEEeecCCCCCC
Q 025842 122 GVSAIGAAGFCWGGVVAAKLA----SSH---DIQAAVVLHPGAITV-DD---I-NEIKVPVAILGAEIDHVS 181 (247)
Q Consensus 122 ~~~~i~l~G~S~Gg~~a~~~a----~~~---~i~~~v~~~~~~~~~-~~---~-~~~~~P~l~i~g~~D~~~ 181 (247)
+..+|.++|||+|+.+.+.+. .+. -|..+++++...... .. . .-+.-.+.=+++++|-+.
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~~~~~W~~~r~vVsGr~vN~YS~~D~vL 289 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPSDPEEWRKIRSVVSGRLVNVYSENDWVL 289 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCCCHHHHHHHHHHccCeEEEEecCcHHHH
Confidence 556899999999999977654 332 578888887655332 11 2 224568888999888754
No 240
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=81.43 E-value=4.3 Score=27.68 Aligned_cols=35 Identities=14% Similarity=0.133 Sum_probs=19.3
Q ss_pred EEeecCceEEEeecCCCC-CCeEEEEEcCccCCCcc
Q 025842 24 VQQLGGLNTYVTGSGPPD-SKSAILLISDVFGYEAP 58 (247)
Q Consensus 24 ~~~~~~~~~~~~~p~~~~-~~~~vv~~hgg~g~~~~ 58 (247)
..+++|+..+...-.+.+ ...|+||+||+.|+..+
T Consensus 72 ~t~I~g~~iHFih~rs~~~~aiPLll~HGWPgSf~E 107 (112)
T PF06441_consen 72 KTEIDGLDIHFIHVRSKRPNAIPLLLLHGWPGSFLE 107 (112)
T ss_dssp EEEETTEEEEEEEE--S-TT-EEEEEE--SS--GGG
T ss_pred eEEEeeEEEEEEEeeCCCCCCeEEEEECCCCccHHh
Confidence 457889888877644433 35689999988886433
No 241
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=79.31 E-value=5.8 Score=35.15 Aligned_cols=34 Identities=26% Similarity=0.423 Sum_probs=24.6
Q ss_pred chHHHHHHHHHhc--C-CCeEEEEEecccHHHHHHhh
Q 025842 109 VDAKSVIAALKSK--G-VSAIGAAGFCWGGVVAAKLA 142 (247)
Q Consensus 109 ~d~~~~i~~l~~~--~-~~~i~l~G~S~Gg~~a~~~a 142 (247)
....++++.+++. + ..+|..+||||||.++=.+.
T Consensus 508 ~Rs~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lL 544 (697)
T KOG2029|consen 508 ARSNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLL 544 (697)
T ss_pred HHHHHHHHHHHHhccCCCCceEEEecccchHHHHHHH
Confidence 3455667777665 3 45899999999998876643
No 242
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=78.89 E-value=4.5 Score=24.38 Aligned_cols=15 Identities=20% Similarity=0.317 Sum_probs=6.4
Q ss_pred CCeEEEEEcCccCCC
Q 025842 42 SKSAILLISDVFGYE 56 (247)
Q Consensus 42 ~~~~vv~~hgg~g~~ 56 (247)
++++|++.||.++++
T Consensus 42 ~k~pVll~HGL~~ss 56 (63)
T PF04083_consen 42 KKPPVLLQHGLLQSS 56 (63)
T ss_dssp T--EEEEE--TT--G
T ss_pred CCCcEEEECCcccCh
Confidence 577888888666643
No 243
>TIGR02690 resist_ArsH arsenical resistance protein ArsH. Members of this protein family occur in arsenate resistance operons that include at least two different types of arsenate reductase. ArsH is not required for arsenate resistance in some systems. This family belongs to the larger family of NADPH-dependent FMN reductases (Pfam model pfam03358). The function of ArsH is not known.
Probab=76.51 E-value=8.9 Score=29.65 Aligned_cols=92 Identities=15% Similarity=0.077 Sum_probs=45.1
Q ss_pred eEEEEEcCccCCCc--chH-HHHHHHHHhcCcEEEEeccCCCCCccCCCCcc-cchHHH---Hhhc---------CCccc
Q 025842 44 SAILLISDVFGYEA--PLF-RKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQ-FDREAW---RKIH---------NTDKG 107 (247)
Q Consensus 44 ~~vv~~hgg~g~~~--~~~-~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~-~~~~~~---~~~~---------~~~~~ 107 (247)
..|+.+.|..-..+ ... +.+++.+.++|+.+-.+|+. ..+..+..... .....| .... .....
T Consensus 27 ~kI~~I~GSlR~~S~n~~la~~~~~~~~~~g~~v~~idl~-~lPl~~~d~~~~p~v~~l~~~v~~ADgvii~TPEYn~si 105 (219)
T TIGR02690 27 PRILLLYGSLRERSYSRLLAEEAARLLGCEGRETRIFDPP-GLPLPDAAHADHPKVRELRQLSEWSEGQVWCSPERHGAI 105 (219)
T ss_pred CEEEEEECCCCCcchHHHHHHHHHHHHhhcCCEEEEeCcc-cCCCCCcCcccCHHHHHHHHHHHhCCEEEEeCCccccCc
Confidence 45777775553221 111 23334444469999999873 22220111111 111222 1111 11223
Q ss_pred cchHHHHHHHHHhc-------CCCeEEEEEecccHHH
Q 025842 108 YVDAKSVIAALKSK-------GVSAIGAAGFCWGGVV 137 (247)
Q Consensus 108 ~~d~~~~i~~l~~~-------~~~~i~l~G~S~Gg~~ 137 (247)
..-++.+|+|+... ..++++++|.| ||..
T Consensus 106 pg~LKNaiDwls~~~~~~~~~~~KpvaivgaS-gg~~ 141 (219)
T TIGR02690 106 TGSQKDQIDWIPLSVGPVRPTQGKTLAVMQVS-GGSQ 141 (219)
T ss_pred CHHHHHHHHhcccCcccccccCCCcEEEEEeC-CcHh
Confidence 34578888888753 34688899988 5444
No 244
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=76.38 E-value=4.5 Score=32.52 Aligned_cols=35 Identities=20% Similarity=0.158 Sum_probs=27.4
Q ss_pred cchHHHHHHHHHhc--CCCeEEEEEecccHHHHHHhh
Q 025842 108 YVDAKSVIAALKSK--GVSAIGAAGFCWGGVVAAKLA 142 (247)
Q Consensus 108 ~~d~~~~i~~l~~~--~~~~i~l~G~S~Gg~~a~~~a 142 (247)
...+..+..++.+. +.++|.++|+|-|+.+|-.++
T Consensus 74 ~~~I~~ay~~l~~~~~~gd~I~lfGFSRGA~~AR~~a 110 (277)
T PF09994_consen 74 EARIRDAYRFLSKNYEPGDRIYLFGFSRGAYTARAFA 110 (277)
T ss_pred HHHHHHHHHHHHhccCCcceEEEEecCccHHHHHHHH
Confidence 35667777777554 567999999999999988766
No 245
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=76.28 E-value=7.1 Score=33.74 Aligned_cols=65 Identities=15% Similarity=0.067 Sum_probs=42.2
Q ss_pred ccEEEeecCCCCCCCHHHHHHHHHHHHhcc---------------C-----CCeeEEEeCCCCccccccCCCCChHHHHH
Q 025842 168 VPVAILGAEIDHVSPPEDLKRFGEILSAKL---------------K-----NDCLVKIYPRVSHGWTVRYNVEDEFAVKS 227 (247)
Q Consensus 168 ~P~l~i~g~~D~~~~~~~~~~~~~~l~~~~---------------~-----~~~~~~~~~~~~H~~~~~~~~~~~~~~~~ 227 (247)
.++++..|+.|.+||.-..+.+.+.+.-.. | .+..+..+.|+||..-.+ .
T Consensus 364 ~rvliysGD~D~~~p~~gt~~~i~~L~~~~~~~~~pW~~~~~qvaG~~~~Y~~ltf~tVrGaGH~VP~~----------~ 433 (454)
T KOG1282|consen 364 YRVLIYSGDHDLVVPFLGTQAWIKSLNLSITDEWRPWYHKGGQVAGYTKTYGGLTFATVRGAGHMVPYD----------K 433 (454)
T ss_pred eEEEEEeCCcceeCcchhhHHHHHhccCccccCccCCccCCCceeeeEEEecCEEEEEEeCCcccCCCC----------C
Confidence 578999999999999888888766652100 0 013345666888865443 2
Q ss_pred HHHHHHHHHHHHHHH
Q 025842 228 AEEAHEDMINWLTKY 242 (247)
Q Consensus 228 ~~~~~~~~~~fl~~~ 242 (247)
++.+...+-.|+..+
T Consensus 434 p~~al~m~~~fl~g~ 448 (454)
T KOG1282|consen 434 PESALIMFQRFLNGQ 448 (454)
T ss_pred cHHHHHHHHHHHcCC
Confidence 456777777887653
No 246
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=74.65 E-value=10 Score=32.98 Aligned_cols=65 Identities=14% Similarity=0.016 Sum_probs=46.9
Q ss_pred cccEEEeecCCCCCCCHHHHHHHHHHHHh---------------c-c----C-----C-----CeeEEEeCCCCcccccc
Q 025842 167 KVPVAILGAEIDHVSPPEDLKRFGEILSA---------------K-L----K-----N-----DCLVKIYPRVSHGWTVR 216 (247)
Q Consensus 167 ~~P~l~i~g~~D~~~~~~~~~~~~~~l~~---------------~-~----~-----~-----~~~~~~~~~~~H~~~~~ 216 (247)
..+||+..|+.|.+|+....+++.+.+.= . . | . +.+++.+.++||....+
T Consensus 364 gikVLiYnGd~D~icn~~Gt~~wi~~L~w~g~~~f~~a~~~~w~~~~~~v~G~vk~~~~~~~~~l~~~~V~~AGH~vp~d 443 (462)
T PTZ00472 364 GVRVMIYAGDMDFICNWIGNKAWTLALQWPGNAEFNAAPDVPFSAVDGRWAGLVRSAASNTSSGFSFVQVYNAGHMVPMD 443 (462)
T ss_pred CceEEEEECCcCeecCcHhHHHHHHhCCCCCccchhhcCccccEecCCEeceEEEEEecccCCCeEEEEECCCCccChhh
Confidence 47999999999999999888888776630 0 0 0 1 34566667888876553
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHH
Q 025842 217 YNVEDEFAVKSAEEAHEDMINWLTK 241 (247)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~fl~~ 241 (247)
.++.+.+.+.+|+..
T Consensus 444 ----------~P~~~~~~i~~fl~~ 458 (462)
T PTZ00472 444 ----------QPAVALTMINRFLRN 458 (462)
T ss_pred ----------HHHHHHHHHHHHHcC
Confidence 677888888888854
No 247
>TIGR02884 spore_pdaA delta-lactam-biosynthetic de-N-acetylase. Muramic delta-lactam is an unusual constituent of peptidoglycan, found only in bacterial spores in the peptidoglycan wall, or spore cortex. The proteins in this family are PdaA (yfjS), a member of a larger family of polysaccharide deacetylases, and are specificially involved in delta-lactam biosynthesis. PdaA acts immediately after CwlD, an N-acetylmuramoyl-L-alanine amidase and performs a de-N-acetylation. PdaA may also perform the following transpeptidation for lactam ring formation, as heterologous expression in E. coli of CwlD and PdaA together is sufficient for delta-lactam production.
Probab=74.24 E-value=4.7 Score=31.24 Aligned_cols=36 Identities=25% Similarity=0.329 Sum_probs=27.7
Q ss_pred CeEEEEEcCccCCCcchHHHHHHHHHhcCcEEEEec
Q 025842 43 KSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPD 78 (247)
Q Consensus 43 ~~~vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d 78 (247)
...||++|.+...+.+.+..+.+.|.++||.++.++
T Consensus 186 ~g~IiLlHd~~~~t~~aL~~ii~~lk~~Gy~fvtl~ 221 (224)
T TIGR02884 186 PGAILLLHAVSKDNAEALDKIIKDLKEQGYTFKSLD 221 (224)
T ss_pred CCcEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEhH
Confidence 356999996544445567788899999999998875
No 248
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=70.11 E-value=0.91 Score=31.63 Aligned_cols=43 Identities=16% Similarity=0.289 Sum_probs=26.2
Q ss_pred ecCceEEEeecCCCCCCeEEEEEcCccCCCcchH-HHHHHHHHhcC
Q 025842 27 LGGLNTYVTGSGPPDSKSAILLISDVFGYEAPLF-RKLADKVAGAG 71 (247)
Q Consensus 27 ~~~~~~~~~~p~~~~~~~~vv~~hgg~g~~~~~~-~~~a~~la~~G 71 (247)
++.+..|+. .+...+|.|+-+||+.|...... +-+|+.|-..|
T Consensus 38 ~~ai~~~l~--~~~p~KpLVlSfHG~tGtGKn~v~~liA~~ly~~G 81 (127)
T PF06309_consen 38 VNAIKGHLA--NPNPRKPLVLSFHGWTGTGKNFVSRLIAEHLYKSG 81 (127)
T ss_pred HHHHHHHHc--CCCCCCCEEEEeecCCCCcHHHHHHHHHHHHHhcc
Confidence 345666776 33446788999998877543322 34566654555
No 249
>PLN02209 serine carboxypeptidase
Probab=69.97 E-value=23 Score=30.66 Aligned_cols=35 Identities=17% Similarity=0.295 Sum_probs=25.3
Q ss_pred CCeEEEEEecccHHHHHHhhc-----C------C-CccEEEEecCCC
Q 025842 123 VSAIGAAGFCWGGVVAAKLAS-----S------H-DIQAAVVLHPGA 157 (247)
Q Consensus 123 ~~~i~l~G~S~Gg~~a~~~a~-----~------~-~i~~~v~~~~~~ 157 (247)
..++.+.|.|.||..+-.+|. + . .++++++.+|..
T Consensus 166 ~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng~t 212 (437)
T PLN02209 166 SNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQGYVLGNPIT 212 (437)
T ss_pred CCCEEEEecCcCceehHHHHHHHHhhcccccCCceeeeeEEecCccc
Confidence 358999999999987666551 1 1 677777777655
No 250
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=68.57 E-value=18 Score=29.73 Aligned_cols=64 Identities=13% Similarity=0.075 Sum_probs=46.5
Q ss_pred cccEEEeecCCCCCCCHHHHHHHHHHHHhc--------------c------CCCeeEEEeCCCCccccccCCCCChHHHH
Q 025842 167 KVPVAILGAEIDHVSPPEDLKRFGEILSAK--------------L------KNDCLVKIYPRVSHGWTVRYNVEDEFAVK 226 (247)
Q Consensus 167 ~~P~l~i~g~~D~~~~~~~~~~~~~~l~~~--------------~------~~~~~~~~~~~~~H~~~~~~~~~~~~~~~ 226 (247)
..++|+..|+.|.+|+.-..+.+.+.|.-. . +...++..+-++||... .
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~---------- 301 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-Y---------- 301 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-c----------
Confidence 479999999999999999999988887310 0 11255666668999762 2
Q ss_pred HHHHHHHHHHHHHHH
Q 025842 227 SAEEAHEDMINWLTK 241 (247)
Q Consensus 227 ~~~~~~~~~~~fl~~ 241 (247)
.++.+...+-+|+..
T Consensus 302 qP~~al~m~~~fi~~ 316 (319)
T PLN02213 302 RPNETFIMFQRWISG 316 (319)
T ss_pred CHHHHHHHHHHHHcC
Confidence 256788888888854
No 251
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=68.41 E-value=17 Score=35.52 Aligned_cols=47 Identities=19% Similarity=0.306 Sum_probs=35.0
Q ss_pred HHHHHHHHHhc-CCCeEEEEEecccHHHHHHhhc----CCCccEEEEecCCC
Q 025842 111 AKSVIAALKSK-GVSAIGAAGFCWGGVVAAKLAS----SHDIQAAVVLHPGA 157 (247)
Q Consensus 111 ~~~~i~~l~~~-~~~~i~l~G~S~Gg~~a~~~a~----~~~i~~~v~~~~~~ 157 (247)
+...|+.+++. +..+--++|+|+|+.++..+|. ......++++.++.
T Consensus 2168 A~~yirqirkvQP~GPYrl~GYSyG~~l~f~ma~~Lqe~~~~~~lillDGsp 2219 (2376)
T KOG1202|consen 2168 AAYYIRQIRKVQPEGPYRLAGYSYGACLAFEMASQLQEQQSPAPLILLDGSP 2219 (2376)
T ss_pred HHHHHHHHHhcCCCCCeeeeccchhHHHHHHHHHHHHhhcCCCcEEEecCch
Confidence 44567777776 4457779999999999998772 23566688888876
No 252
>COG2185 Sbm Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) [Lipid metabolism]
Probab=67.71 E-value=42 Score=24.00 Aligned_cols=71 Identities=20% Similarity=0.282 Sum_probs=46.8
Q ss_pred CCCeEEEEEcCccCCCcchHHHHHHHHHhcCcEEEEeccCCCCCccCCCCcccchHHHHhhcCCccccchHHHHHHHHHh
Q 025842 41 DSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKS 120 (247)
Q Consensus 41 ~~~~~vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~ 120 (247)
+.+|.|++.-=|...+.....-+++.|++.||.|+..-.+ ..+ .++++...+
T Consensus 10 g~rprvlvak~GlDgHd~gakvia~~l~d~GfeVi~~g~~-~tp---------------------------~e~v~aA~~ 61 (143)
T COG2185 10 GARPRVLVAKLGLDGHDRGAKVIARALADAGFEVINLGLF-QTP---------------------------EEAVRAAVE 61 (143)
T ss_pred CCCceEEEeccCccccccchHHHHHHHHhCCceEEecCCc-CCH---------------------------HHHHHHHHh
Confidence 4567777766456666566677889999999999987763 211 133444445
Q ss_pred cCCCeEEEEEecccHHHHH
Q 025842 121 KGVSAIGAAGFCWGGVVAA 139 (247)
Q Consensus 121 ~~~~~i~l~G~S~Gg~~a~ 139 (247)
.+.+-|++-+.+.|...-.
T Consensus 62 ~dv~vIgvSsl~g~h~~l~ 80 (143)
T COG2185 62 EDVDVIGVSSLDGGHLTLV 80 (143)
T ss_pred cCCCEEEEEeccchHHHHH
Confidence 5777888888776665544
No 253
>PLN02209 serine carboxypeptidase
Probab=67.60 E-value=18 Score=31.31 Aligned_cols=64 Identities=14% Similarity=0.117 Sum_probs=46.8
Q ss_pred cccEEEeecCCCCCCCHHHHHHHHHHHHh-------------c-------cCCCeeEEEeCCCCccccccCCCCChHHHH
Q 025842 167 KVPVAILGAEIDHVSPPEDLKRFGEILSA-------------K-------LKNDCLVKIYPRVSHGWTVRYNVEDEFAVK 226 (247)
Q Consensus 167 ~~P~l~i~g~~D~~~~~~~~~~~~~~l~~-------------~-------~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~ 226 (247)
..++|+..|+.|-+|+.-..+.+.+.+.= + -+...++..+-++||.. ..
T Consensus 351 girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmV-p~---------- 419 (437)
T PLN02209 351 GYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTA-EY---------- 419 (437)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCCc-Cc----------
Confidence 36899999999999999999998887730 0 01125666677799976 22
Q ss_pred HHHHHHHHHHHHHHH
Q 025842 227 SAEEAHEDMINWLTK 241 (247)
Q Consensus 227 ~~~~~~~~~~~fl~~ 241 (247)
.++.+...+.+|+..
T Consensus 420 qP~~al~m~~~fi~~ 434 (437)
T PLN02209 420 LPEESSIMFQRWISG 434 (437)
T ss_pred CHHHHHHHHHHHHcC
Confidence 357888888888864
No 254
>COG0431 Predicted flavoprotein [General function prediction only]
Probab=67.54 E-value=17 Score=27.19 Aligned_cols=60 Identities=20% Similarity=0.312 Sum_probs=40.3
Q ss_pred hHHHHHHHHHh-cCcEEEEeccCCCCCccCCCCcccchHHHHhhcCCccccchHHHHHHHHHhc--CCCeEEEEEecccH
Q 025842 59 LFRKLADKVAG-AGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSK--GVSAIGAAGFCWGG 135 (247)
Q Consensus 59 ~~~~~a~~la~-~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~--~~~~i~l~G~S~Gg 135 (247)
....+.+.++. .|+.+++|.|.++.+ .-++.+++|+... ..+++.+++.|.|+
T Consensus 57 ~v~~~~~~i~~aD~li~~tPeYn~s~p------------------------g~lKnaiD~l~~~~~~~Kpv~~~~~s~g~ 112 (184)
T COG0431 57 AVQALREAIAAADGLIIATPEYNGSYP------------------------GALKNAIDWLSREALGGKPVLLLGTSGGG 112 (184)
T ss_pred HHHHHHHHHHhCCEEEEECCccCCCCC------------------------HHHHHHHHhCCHhHhCCCcEEEEecCCCc
Confidence 34455555543 488888888843333 3466788888765 45788888888888
Q ss_pred HHHHHhh
Q 025842 136 VVAAKLA 142 (247)
Q Consensus 136 ~~a~~~a 142 (247)
.-++.+.
T Consensus 113 ~~~~~a~ 119 (184)
T COG0431 113 AGGLRAQ 119 (184)
T ss_pred hhHHHHH
Confidence 8777654
No 255
>KOG3179 consensus Predicted glutamine synthetase [Nucleotide transport and metabolism]
Probab=67.54 E-value=26 Score=26.68 Aligned_cols=104 Identities=13% Similarity=0.111 Sum_probs=60.8
Q ss_pred HHHHHHHHHhcCCCeEEEEEecccHHHHHHhhcCC----------CccEEEEecCCCCCccccccccccEEEeecCCCCC
Q 025842 111 AKSVIAALKSKGVSAIGAAGFCWGGVVAAKLASSH----------DIQAAVVLHPGAITVDDINEIKVPVAILGAEIDHV 180 (247)
Q Consensus 111 ~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~----------~i~~~v~~~~~~~~~~~~~~~~~P~l~i~g~~D~~ 180 (247)
+..+...+++.+..+.=++|.|+|-.+...+.... ....+..+--.......+..+..-+-|+.+-.|.+
T Consensus 79 I~KLcs~~kkld~mkkkvlGICFGHQiiara~Gg~Vgra~KG~~~~lg~itivk~~~~~~~yFG~~~~~l~IikcHqDev 158 (245)
T KOG3179|consen 79 IKKLCSFVKKLDFMKKKVLGICFGHQIIARAKGGKVGRAPKGPDLGLGSITIVKDAEKPEKYFGEIPKSLNIIKCHQDEV 158 (245)
T ss_pred HHHHHHHHHHHHhhccceEEEeccHHHHHHhhCCccccCCCCCcccccceEEEEecccchhhcccchhhhhHHhhcccce
Confidence 44555556565655677899999999988876322 22333333323334445665555667777888987
Q ss_pred CCHHHHHHHHHHHHhccCCCeeEEEeCCCCccccccCCC
Q 025842 181 SPPEDLKRFGEILSAKLKNDCLVKIYPRVSHGWTVRYNV 219 (247)
Q Consensus 181 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~H~~~~~~~~ 219 (247)
+......++...- ...++++..++ .|.+...+.+
T Consensus 159 le~PE~a~llasS---e~ceve~fs~~--~~~l~fQGHP 192 (245)
T KOG3179|consen 159 LELPEGAELLASS---EKCEVEMFSIE--DHLLCFQGHP 192 (245)
T ss_pred ecCCchhhhhccc---cccceEEEEec--ceEEEecCCc
Confidence 6544433333322 21244555555 6888877666
No 256
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=67.07 E-value=18 Score=31.26 Aligned_cols=64 Identities=14% Similarity=0.125 Sum_probs=47.0
Q ss_pred cccEEEeecCCCCCCCHHHHHHHHHHHHhc-------------------c-CCCeeEEEeCCCCccccccCCCCChHHHH
Q 025842 167 KVPVAILGAEIDHVSPPEDLKRFGEILSAK-------------------L-KNDCLVKIYPRVSHGWTVRYNVEDEFAVK 226 (247)
Q Consensus 167 ~~P~l~i~g~~D~~~~~~~~~~~~~~l~~~-------------------~-~~~~~~~~~~~~~H~~~~~~~~~~~~~~~ 226 (247)
..++|+..|+.|.+|+.-..+.+.+.|.-. . +...++..+-++||... .
T Consensus 347 ~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp--~--------- 415 (433)
T PLN03016 347 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE--Y--------- 415 (433)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCC--C---------
Confidence 368999999999999999999988877300 0 11256667778999862 2
Q ss_pred HHHHHHHHHHHHHHH
Q 025842 227 SAEEAHEDMINWLTK 241 (247)
Q Consensus 227 ~~~~~~~~~~~fl~~ 241 (247)
.++.+...+-+|++.
T Consensus 416 qP~~al~m~~~Fi~~ 430 (433)
T PLN03016 416 RPNETFIMFQRWISG 430 (433)
T ss_pred CHHHHHHHHHHHHcC
Confidence 357888888888864
No 257
>PF09370 TIM-br_sig_trns: TIM-barrel signal transduction protein; InterPro: IPR009215 Members of this family are predicted to have a TIM barrel fold, based on PSI-BLAST analysis (iteration 4) and on SCOP prediction (using SMART). Interestingly, this novel domain also exists as an N-terminal domain of sigma54-dependent transcriptional activators (enhancer-binding proteins). Because sigma54 dependent activators typically have a three-domain structure: the variable N-terminal regulatory (activation) domain involved in signal recognition/receiving, the central AAA-type ATPase domain, and the DNA-binding domain (see PIRSF003187 from PIRSF, PIRSF005263 from PIRSF, PIRSF003184 from PIRSF, PIRSF005263 from PIRSF, IPR014443 from INTERPRO for details), the proteins of the current entry may be predicted to play a role in signal recognition/receiving and signal transduction.; PDB: 2P10_C.
Probab=65.96 E-value=7.4 Score=30.86 Aligned_cols=94 Identities=19% Similarity=0.214 Sum_probs=51.9
Q ss_pred HHHHHHHhcCCCeEEEEEecccHHHHHHhhcCCCccEEEEecCCCC------------------------Ccccccccc-
Q 025842 113 SVIAALKSKGVSAIGAAGFCWGGVVAAKLASSHDIQAAVVLHPGAI------------------------TVDDINEIK- 167 (247)
Q Consensus 113 ~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~~i~~~v~~~~~~~------------------------~~~~~~~~~- 167 (247)
++++.|++.=...--++|-+.|..++...+....+.-++.++.... ..+.++.++
T Consensus 2 eil~~l~~~i~~~~pIig~gaGtGlsAk~ae~gGaDlI~~ynsGrfR~~G~~SlagllpygnaN~iv~em~~eiLp~v~~ 81 (268)
T PF09370_consen 2 EILDRLRAQIKAGKPIIGAGAGTGLSAKCAEKGGADLILIYNSGRFRMAGRGSLAGLLPYGNANEIVMEMAREILPVVKD 81 (268)
T ss_dssp HHHHHHHHHHHTT--EEEEEESSHHHHHHHHHTT-SEEEE-HHHHHHHTT--GGGGGBTEEEHHHHHHHHHHHHGGG-SS
T ss_pred hHHHHHHHHHhCCCceEEEeeccchhhHHHHhcCCCEEEEecchhHhhCCCcchhhhhcccCHhHHHHHHHHhhhhhccC
Confidence 3455565541223346788999999999998887777777663320 123344554
Q ss_pred ccEEEeecCCCCCCCHHHHHHHHHHHHhccCCCeeEEEeCCCCc
Q 025842 168 VPVAILGAEIDHVSPPEDLKRFGEILSAKLKNDCLVKIYPRVSH 211 (247)
Q Consensus 168 ~P~l~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~H 211 (247)
.|++.-.+..||+.. ...+.+.+ ++.| -.-+.-||..+.
T Consensus 82 tPViaGv~atDP~~~---~~~fl~~l-k~~G-f~GV~NfPTvgl 120 (268)
T PF09370_consen 82 TPVIAGVCATDPFRD---MDRFLDEL-KELG-FSGVQNFPTVGL 120 (268)
T ss_dssp S-EEEEE-TT-TT-----HHHHHHHH-HHHT--SEEEE-S-GGG
T ss_pred CCEEEEecCcCCCCc---HHHHHHHH-HHhC-CceEEECCccee
Confidence 899999999998765 45555555 3333 445777786654
No 258
>TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB. This model describes the YbaN protein family, also called PdaB and SpoVIE, of Gram-positive bacteria. Although ybaN null mutants have only a mild sporulation defect, ybaN/ytrI double mutants show drastically reducted sporulation efficiencies. This synthetic defect suggests the role of this sigmaE-controlled gene in sporulation had been masked by functional redundancy. Members of this family are homologous to a characterized polysaccharide deacetylase; the exact function this protein family is unknown.
Probab=65.88 E-value=6.6 Score=29.44 Aligned_cols=35 Identities=14% Similarity=0.203 Sum_probs=25.0
Q ss_pred eEEEEEcCcc--CCCcchHHHHHHHHHhcCcEEEEec
Q 025842 44 SAILLISDVF--GYEAPLFRKLADKVAGAGFLVVAPD 78 (247)
Q Consensus 44 ~~vv~~hgg~--g~~~~~~~~~a~~la~~G~~v~~~d 78 (247)
..||++|.+. ..+...+..+.+.|.++||..+.++
T Consensus 152 g~Iil~Hd~~~~~~t~~~l~~~i~~l~~~Gy~~vtl~ 188 (191)
T TIGR02764 152 GDIILLHASDSAKQTVKALPTIIKKLKEKGYEFVTIS 188 (191)
T ss_pred CCEEEEeCCCCcHhHHHHHHHHHHHHHHCCCEEEEHH
Confidence 4599999432 2233456778889999999998875
No 259
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=64.98 E-value=16 Score=22.94 Aligned_cols=34 Identities=24% Similarity=0.269 Sum_probs=25.8
Q ss_pred chHHHHHHHHHhc----CCCeEEEEEecccHHHHHHhh
Q 025842 109 VDAKSVIAALKSK----GVSAIGAAGFCWGGVVAAKLA 142 (247)
Q Consensus 109 ~d~~~~i~~l~~~----~~~~i~l~G~S~Gg~~a~~~a 142 (247)
..+...++|++.. +++++-++|-|.|=.+|...+
T Consensus 21 ~~V~~qI~yvk~~~~~~GpK~VLViGaStGyGLAsRIa 58 (78)
T PF12242_consen 21 RNVENQIEYVKSQGKINGPKKVLVIGASTGYGLASRIA 58 (78)
T ss_dssp HHHHHHHHHHHHC---TS-SEEEEES-SSHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCCceEEEEecCCcccHHHHHH
Confidence 5677888888885 568999999999988886644
No 260
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=64.63 E-value=60 Score=32.16 Aligned_cols=101 Identities=17% Similarity=0.149 Sum_probs=56.9
Q ss_pred HHHHHHHHHhcCCCeEEEEEecccHHHHHHh------------h--cC------CCccEEEEecCCCCCcccccccccc-
Q 025842 111 AKSVIAALKSKGVSAIGAAGFCWGGVVAAKL------------A--SS------HDIQAAVVLHPGAITVDDINEIKVP- 169 (247)
Q Consensus 111 ~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~------------a--~~------~~i~~~v~~~~~~~~~~~~~~~~~P- 169 (247)
-.++.+.|...+..+=+++|||.|-..+..+ | +. ..+++.++--+ .+-+..+.--+|
T Consensus 569 QiaLtDlLs~lgi~PDGIvGHS~GElgc~YaDGclt~EqtvlaAYwRG~sild~~l~kGaMAAVG--LsWEq~~~~~P~~ 646 (2376)
T KOG1202|consen 569 QIALTDLLSCLGIRPDGIVGHSLGELGCGYADGCLTQEQTVLAAYWRGQSILDTHLPKGAMAAVG--LSWEQCKSRCPPD 646 (2376)
T ss_pred HHHHHHHHHhcCCCCCcccccccchhcccccccccCHHHHHHHHHHcCceeccccCCCcchhhhc--CCHHHHhccCCCc
Confidence 3466677777788888999999996654322 1 00 02222222111 222233222222
Q ss_pred -EEEeecCCCCC---CCHHHHHHHHHHHHhccCCCeeEEEeCCCCcccccc
Q 025842 170 -VAILGAEIDHV---SPPEDLKRFGEILSAKLKNDCLVKIYPRVSHGWTVR 216 (247)
Q Consensus 170 -~l~i~g~~D~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~H~~~~~ 216 (247)
+=..|..+|.+ -|.+....+.+.+ .+.| +-..+...+|-.|..+
T Consensus 647 ~~paCHNs~D~~TiSGp~a~v~~~v~qL-~~~g--vFak~V~t~G~aFHS~ 694 (2376)
T KOG1202|consen 647 VVPACHNSKDNVTISGPQASVFAFVEQL-RAEG--VFAKEVRTGGYAFHSP 694 (2376)
T ss_pred ccccccCCCCceEecCChHHHHHHHHHh-hhcC--eeeeEecCCCccccCH
Confidence 33566667765 3788889999999 4444 4444555567777664
No 261
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=64.28 E-value=10 Score=32.16 Aligned_cols=64 Identities=14% Similarity=0.093 Sum_probs=42.9
Q ss_pred cccEEEeecCCCCCCCHHHHHHHHHHHHhc---------------------cCCCeeEEEeCCCCccccccCCCCChHHH
Q 025842 167 KVPVAILGAEIDHVSPPEDLKRFGEILSAK---------------------LKNDCLVKIYPRVSHGWTVRYNVEDEFAV 225 (247)
Q Consensus 167 ~~P~l~i~g~~D~~~~~~~~~~~~~~l~~~---------------------~~~~~~~~~~~~~~H~~~~~~~~~~~~~~ 225 (247)
..++|+.+|..|.+||.-..+.+.+.+.-. .-.+.+++.+.++||....+
T Consensus 330 ~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~f~~~~~~~~~~~~G~~k~~~~ltf~~V~~AGHmvP~d--------- 400 (415)
T PF00450_consen 330 GIRVLIYNGDLDLICNFLGTERWIDNLNWSGKDGFRQWPRKVNGQVAGYVKQYGNLTFVTVRGAGHMVPQD--------- 400 (415)
T ss_dssp T-EEEEEEETT-SSS-HHHHHHHHHCTECTEEEEEEEEEEETTCSEEEEEEEETTEEEEEETT--SSHHHH---------
T ss_pred cceeEEeccCCCEEEEeccchhhhhccccCcccccccccccccccccceeEEeccEEEEEEcCCcccChhh---------
Confidence 479999999999999999999998886200 01134677888999986553
Q ss_pred HHHHHHHHHHHHHHH
Q 025842 226 KSAEEAHEDMINWLT 240 (247)
Q Consensus 226 ~~~~~~~~~~~~fl~ 240 (247)
.++.+.+.+-+|++
T Consensus 401 -qP~~a~~m~~~fl~ 414 (415)
T PF00450_consen 401 -QPEAALQMFRRFLK 414 (415)
T ss_dssp -SHHHHHHHHHHHHC
T ss_pred -CHHHHHHHHHHHhc
Confidence 45677777777764
No 262
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=63.71 E-value=6.8 Score=32.09 Aligned_cols=31 Identities=23% Similarity=0.233 Sum_probs=25.6
Q ss_pred HHHHHHHHhcCCCeEEEEEecccHHHHHHhh
Q 025842 112 KSVIAALKSKGVSAIGAAGFCWGGVVAAKLA 142 (247)
Q Consensus 112 ~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a 142 (247)
.++.+.+++.+..+-+++|||+|=+.|+.++
T Consensus 72 ~al~~~l~~~Gi~P~~v~GhSlGE~aA~~aa 102 (318)
T PF00698_consen 72 VALARLLRSWGIKPDAVIGHSLGEYAALVAA 102 (318)
T ss_dssp HHHHHHHHHTTHCESEEEESTTHHHHHHHHT
T ss_pred hhhhhhhcccccccceeeccchhhHHHHHHC
Confidence 3556777777888999999999999988876
No 263
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=63.28 E-value=9.6 Score=30.72 Aligned_cols=31 Identities=26% Similarity=0.326 Sum_probs=24.9
Q ss_pred HHHHHHHhcCCCeEEEEEecccHHHHHHhhc
Q 025842 113 SVIAALKSKGVSAIGAAGFCWGGVVAAKLAS 143 (247)
Q Consensus 113 ~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~ 143 (247)
++.+.+++.+..+-.++|||+|-..|+.++.
T Consensus 71 a~~~~l~~~Gi~p~~~~GhSlGE~aA~~~ag 101 (298)
T smart00827 71 ALARLWRSWGVRPDAVVGHSLGEIAAAYVAG 101 (298)
T ss_pred HHHHHHHHcCCcccEEEecCHHHHHHHHHhC
Confidence 4556666777778899999999999988763
No 264
>PF03853 YjeF_N: YjeF-related protein N-terminus; InterPro: IPR004443 The YjeF N-terminal domains occur either as single proteins or fusions with other domains and are commonly associated with enzymes. In bacteria and archaea, YjeF N-terminal domains are often fused to a YjeF C-terminal domain with high structural homology to the members of a ribokinase-like superfamily (see PDOC00806 from PROSITEDOC)and/or belong to operons that encode enzymes of diverse functions: pyridoxal phosphate biosynthetic protein PdxJ; phosphopanteine-protein transferase; ATP/GTP hydrolase; and pyruvate-formate lyase 1-activating enzyme. In plants, the YjeF N-terminal domain is fused to a C-terminal putative pyridoxamine 5'-phosphate oxidase. In eukaryotes, proteins that consist of (Sm)-FDF-YjeF N-terminal domains may be involved in RNA processing [, ]. The YjeF N-terminal domains represent a novel version of the Rossmann fold, one of the most common protein folds in nature observed in numerous enzyme families, that has acquired a set of catalytic residues and structural features that distinguish them from the conventional dehydrogenases. The YjeF N-terminal domain is comprised of a three-layer alpha-beta-alpha sandwich with a central beta-sheet surrounded by helices. The conservation of the acidic residues in the predicted active site of the YjeF N-terminal domains is reminiscent of the presence of such residues in the active sites of diverse hydrolases [, ].; PDB: 3K5W_A 2O8N_A 2DG2_F 3RNO_A 1JZT_B 3D3K_A 3D3J_A 3RSG_A 3RT9_A 3RRF_A ....
Probab=61.26 E-value=28 Score=25.62 Aligned_cols=37 Identities=16% Similarity=0.066 Sum_probs=26.3
Q ss_pred CCeEEEEEcCccCCCcchHHHHHHHHHhcCcEEEEecc
Q 025842 42 SKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDF 79 (247)
Q Consensus 42 ~~~~vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~ 79 (247)
..+.|+++. |.|.+...-.-.+++|+++||.|.++-+
T Consensus 24 ~~~~v~il~-G~GnNGgDgl~~AR~L~~~G~~V~v~~~ 60 (169)
T PF03853_consen 24 KGPRVLILC-GPGNNGGDGLVAARHLANRGYNVTVYLV 60 (169)
T ss_dssp TT-EEEEEE--SSHHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCCeEEEEE-CCCCChHHHHHHHHHHHHCCCeEEEEEE
Confidence 456777777 4565555556789999999999998544
No 265
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=61.05 E-value=7.1 Score=33.19 Aligned_cols=67 Identities=15% Similarity=0.205 Sum_probs=38.0
Q ss_pred ccccEEEeecCCCCCCCHHHHHHHHHHHHhccCCCeeEEEeCCCCccccccCCCCChHHHHHHHHHHHHHHHHHHH
Q 025842 166 IKVPVAILGAEIDHVSPPEDLKRFGEILSAKLKNDCLVKIYPRVSHGWTVRYNVEDEFAVKSAEEAHEDMINWLTK 241 (247)
Q Consensus 166 ~~~P~l~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~ 241 (247)
-..|++++.|.-|.+-+ +....+.+.+ ...|...-.+.+||.|+........ .....+..+++|+..
T Consensus 188 ~p~P~VIv~gGlDs~qe-D~~~l~~~~l-~~rGiA~LtvDmPG~G~s~~~~l~~-------D~~~l~~aVLd~L~~ 254 (411)
T PF06500_consen 188 KPYPTVIVCGGLDSLQE-DLYRLFRDYL-APRGIAMLTVDMPGQGESPKWPLTQ-------DSSRLHQAVLDYLAS 254 (411)
T ss_dssp S-EEEEEEE--TTS-GG-GGHHHHHCCC-HHCT-EEEEE--TTSGGGTTT-S-S--------CCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCcchhHH-HHHHHHHHHH-HhCCCEEEEEccCCCcccccCCCCc-------CHHHHHHHHHHHHhc
Confidence 35799999999998653 3333444444 4466677777888888864322221 235788999999975
No 266
>COG1856 Uncharacterized homolog of biotin synthetase [Function unknown]
Probab=60.75 E-value=79 Score=24.67 Aligned_cols=80 Identities=21% Similarity=0.217 Sum_probs=51.3
Q ss_pred HHHHHHHHhcCcEEEEeccCCCCCccCCCCcccchHHHHhhcCCccccchHHHHHHHHHhcCC--CeEEEEEecccHHH-
Q 025842 61 RKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSKGV--SAIGAAGFCWGGVV- 137 (247)
Q Consensus 61 ~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~--~~i~l~G~S~Gg~~- 137 (247)
...++.|...+..|++.|+ .|... . ..+-+.....++|-...+++|.+.+. -+-+.+|.+.|+.-
T Consensus 100 E~~~eklk~~~vdvvsLDf-vgDn~--------v---Ik~vy~l~ksv~dyl~~l~~L~e~~irvvpHitiGL~~gki~~ 167 (275)
T COG1856 100 ESDLEKLKEELVDVVSLDF-VGDND--------V---IKRVYKLPKSVEDYLRSLLLLKENGIRVVPHITIGLDFGKIHG 167 (275)
T ss_pred HHHHHHHHHhcCcEEEEee-cCChH--------H---HHHHHcCCccHHHHHHHHHHHHHcCceeceeEEEEeccCcccc
Confidence 3456777788889999998 34422 1 11222334455677778888887753 36678999999865
Q ss_pred ---HHHhhcCCCccEEEE
Q 025842 138 ---AAKLASSHDIQAAVV 152 (247)
Q Consensus 138 ---a~~~a~~~~i~~~v~ 152 (247)
|+.+..+..+.++|+
T Consensus 168 e~kaIdiL~~~~~DalVl 185 (275)
T COG1856 168 EFKAIDILVNYEPDALVL 185 (275)
T ss_pred hHHHHHHHhcCCCCeEEE
Confidence 555555556666554
No 267
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=60.40 E-value=12 Score=27.52 Aligned_cols=32 Identities=41% Similarity=0.376 Sum_probs=25.8
Q ss_pred HHHHHHHhcCCCeEEEEEecccHHHHHHhhcC
Q 025842 113 SVIAALKSKGVSAIGAAGFCWGGVVAAKLASS 144 (247)
Q Consensus 113 ~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~ 144 (247)
.+++.|.+++...-.+.|-|.|+..+..++..
T Consensus 15 Gvl~aL~e~gi~~d~v~GtSaGAi~aa~~a~g 46 (172)
T cd07198 15 GVAKALRERGPLIDIIAGTSAGAIVAALLASG 46 (172)
T ss_pred HHHHHHHHcCCCCCEEEEECHHHHHHHHHHcC
Confidence 55677777766677889999999999998854
No 268
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=60.28 E-value=12 Score=30.26 Aligned_cols=30 Identities=27% Similarity=0.207 Sum_probs=24.3
Q ss_pred HHHHHHHhcCCCeEEEEEecccHHHHHHhh
Q 025842 113 SVIAALKSKGVSAIGAAGFCWGGVVAAKLA 142 (247)
Q Consensus 113 ~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a 142 (247)
+..+.+++.+..+-.++|||+|=..|+.++
T Consensus 65 al~~~l~~~g~~P~~v~GhS~GE~aAa~~a 94 (295)
T TIGR03131 65 AAWRALLALLPRPSAVAGYSVGEYAAAVVA 94 (295)
T ss_pred HHHHHHHhcCCCCcEEeecCHHHHHHHHHh
Confidence 455666667778899999999999888876
No 269
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=59.94 E-value=60 Score=26.86 Aligned_cols=129 Identities=15% Similarity=0.058 Sum_probs=70.7
Q ss_pred CCCCCeEEEEEcCccCCCcch---HHHHHH-----------HHHhcCcEEEEeccCC--CCCccCCCCcccchHHHHhhc
Q 025842 39 PPDSKSAILLISDVFGYEAPL---FRKLAD-----------KVAGAGFLVVAPDFFY--GDPIVDLNNPQFDREAWRKIH 102 (247)
Q Consensus 39 ~~~~~~~vv~~hgg~g~~~~~---~~~~a~-----------~la~~G~~v~~~d~~~--g~~~~~~~~~~~~~~~~~~~~ 102 (247)
.....|..+.+.||.|.++.. ++++.. .|. -..++.+|-+- |.|.++.. ..+ ..
T Consensus 27 ~ks~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWlk--~adllfvDnPVGaGfSyVdg~---~~Y-----~~ 96 (414)
T KOG1283|consen 27 VKSERPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWLK--DADLLFVDNPVGAGFSYVDGS---SAY-----TT 96 (414)
T ss_pred cccCCCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhhh--hccEEEecCCCcCceeeecCc---ccc-----cc
Confidence 334567888888887754332 232221 221 24677888773 33331111 100 01
Q ss_pred CCccccchHHHHHHHHHhc----CCCeEEEEEecccHHHHHHhhcC-------C----CccEEEEecCCCCCcccccccc
Q 025842 103 NTDKGYVDAKSVIAALKSK----GVSAIGAAGFCWGGVVAAKLASS-------H----DIQAAVVLHPGAITVDDINEIK 167 (247)
Q Consensus 103 ~~~~~~~d~~~~i~~l~~~----~~~~i~l~G~S~Gg~~a~~~a~~-------~----~i~~~v~~~~~~~~~~~~~~~~ 167 (247)
...+...|+.++++-+... ...++.++--|.||-++...+.. . .+.++++=.+++.+.+.+-..
T Consensus 97 ~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLGDSWISP~D~V~SW- 175 (414)
T KOG1283|consen 97 NNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALGDSWISPEDFVFSW- 175 (414)
T ss_pred cHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEccCcccChhHhhhcc-
Confidence 1122334555555444433 34599999999999999887632 1 567777777777555544333
Q ss_pred ccEEEeecCCC
Q 025842 168 VPVAILGAEID 178 (247)
Q Consensus 168 ~P~l~i~g~~D 178 (247)
.|.|.-.+.-|
T Consensus 176 GP~L~~~S~LD 186 (414)
T KOG1283|consen 176 GPLLKHVSRLD 186 (414)
T ss_pred hHHHHhhhhhc
Confidence 45555555444
No 270
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=59.68 E-value=13 Score=27.86 Aligned_cols=32 Identities=31% Similarity=0.370 Sum_probs=25.1
Q ss_pred HHHHHHHhcCCCeEEEEEecccHHHHHHhhcC
Q 025842 113 SVIAALKSKGVSAIGAAGFCWGGVVAAKLASS 144 (247)
Q Consensus 113 ~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~ 144 (247)
.+++.+.+.+...=.+.|-|.||.++..++..
T Consensus 16 Gvl~~L~e~~~~~d~i~GtSaGai~aa~~a~g 47 (194)
T cd07207 16 GALKALEEAGILKKRVAGTSAGAITAALLALG 47 (194)
T ss_pred HHHHHHHHcCCCcceEEEECHHHHHHHHHHcC
Confidence 55667776665567889999999999998853
No 271
>cd03413 CbiK_C Anaerobic cobalamin biosynthetic cobalt chelatase (CbiK), C-terminal domain. CbiK is part of the cobalt-early path for cobalamin biosynthesis. It catalyzes the insertion of cobalt into the oxidized form of precorrin-2, factor II (sirohydrochlorin), the second step of the anaerobic branch of vitamin B12 biosynthesis. CbiK belongs to the class II family of chelatases, and is a homomeric enzyme that does not require ATP for its enzymatic activity.
Probab=59.11 E-value=51 Score=22.00 Aligned_cols=21 Identities=24% Similarity=0.362 Sum_probs=13.9
Q ss_pred chHHHHHHHHHhcCCCeEEEE
Q 025842 109 VDAKSVIAALKSKGVSAIGAA 129 (247)
Q Consensus 109 ~d~~~~i~~l~~~~~~~i~l~ 129 (247)
.++.++++.+.+.+..+|.++
T Consensus 42 P~i~~~l~~l~~~G~~~i~lv 62 (103)
T cd03413 42 PGLDDVLAKLKKAGIKKVTLM 62 (103)
T ss_pred CCHHHHHHHHHHcCCCEEEEE
Confidence 345677777777776676654
No 272
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=58.82 E-value=15 Score=29.95 Aligned_cols=17 Identities=24% Similarity=0.225 Sum_probs=14.9
Q ss_pred EEEEecccHHHHHHhhc
Q 025842 127 GAAGFCWGGVVAAKLAS 143 (247)
Q Consensus 127 ~l~G~S~Gg~~a~~~a~ 143 (247)
.+.|-|.||.+|+.++.
T Consensus 44 li~GTStGgiiA~~la~ 60 (308)
T cd07211 44 YICGVSTGAILAFLLGL 60 (308)
T ss_pred EEEecChhHHHHHHHhc
Confidence 37899999999999874
No 273
>PRK10279 hypothetical protein; Provisional
Probab=58.20 E-value=13 Score=30.27 Aligned_cols=31 Identities=39% Similarity=0.432 Sum_probs=26.1
Q ss_pred HHHHHHHhcCCCeEEEEEecccHHHHHHhhc
Q 025842 113 SVIAALKSKGVSAIGAAGFCWGGVVAAKLAS 143 (247)
Q Consensus 113 ~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~ 143 (247)
-+++.|.+.+...-.+.|.|+|+.++..+|.
T Consensus 22 GVL~aL~E~gi~~d~i~GtS~GAlvga~yA~ 52 (300)
T PRK10279 22 GVINALKKVGIEIDIVAGCSIGSLVGAAYAC 52 (300)
T ss_pred HHHHHHHHcCCCcCEEEEEcHHHHHHHHHHc
Confidence 5677888877777889999999999988874
No 274
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=55.80 E-value=15 Score=30.00 Aligned_cols=32 Identities=28% Similarity=0.365 Sum_probs=26.4
Q ss_pred HHHHHHHhcCCCeEEEEEecccHHHHHHhhcC
Q 025842 113 SVIAALKSKGVSAIGAAGFCWGGVVAAKLASS 144 (247)
Q Consensus 113 ~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~ 144 (247)
-+++.|.+.+...-.+.|.|+|+.++..++..
T Consensus 32 GvL~aLee~gi~~d~v~GtSaGAi~ga~ya~g 63 (306)
T cd07225 32 GVIKALEEAGIPVDMVGGTSIGAFIGALYAEE 63 (306)
T ss_pred HHHHHHHHcCCCCCEEEEECHHHHHHHHHHcC
Confidence 66778888777677889999999999998754
No 275
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=55.57 E-value=23 Score=26.09 Aligned_cols=32 Identities=31% Similarity=0.382 Sum_probs=24.9
Q ss_pred HHHHHHHhcCCCeEEEEEecccHHHHHHhhcC
Q 025842 113 SVIAALKSKGVSAIGAAGFCWGGVVAAKLASS 144 (247)
Q Consensus 113 ~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~ 144 (247)
-+++.+.+.+...-.+.|.|.|+..+..++..
T Consensus 17 Gvl~~L~e~g~~~d~i~GtSaGAi~aa~~a~g 48 (175)
T cd07228 17 GVLRALEEEGIEIDIIAGSSIGALVGALYAAG 48 (175)
T ss_pred HHHHHHHHCCCCeeEEEEeCHHHHHHHHHHcC
Confidence 45666666666667789999999999988754
No 276
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=55.49 E-value=18 Score=27.98 Aligned_cols=31 Identities=29% Similarity=0.382 Sum_probs=24.4
Q ss_pred HHHHHHHhcCCCeEEEEEecccHHHHHHhhc
Q 025842 113 SVIAALKSKGVSAIGAAGFCWGGVVAAKLAS 143 (247)
Q Consensus 113 ~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~ 143 (247)
.+++.|.+.+...-.+.|-|.|+.++..++.
T Consensus 17 GvL~aL~e~gi~~~~i~GtSaGAi~aa~~a~ 47 (221)
T cd07210 17 GFLAALLEMGLEPSAISGTSAGALVGGLFAS 47 (221)
T ss_pred HHHHHHHHcCCCceEEEEeCHHHHHHHHHHc
Confidence 4566666666556679999999999999884
No 277
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=54.76 E-value=21 Score=26.24 Aligned_cols=32 Identities=28% Similarity=0.366 Sum_probs=24.6
Q ss_pred HHHHHHHhcCCCeEEEEEecccHHHHHHhhcC
Q 025842 113 SVIAALKSKGVSAIGAAGFCWGGVVAAKLASS 144 (247)
Q Consensus 113 ~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~ 144 (247)
.+++.|.+.+...-.+.|-|.|+.++..++..
T Consensus 17 Gvl~~L~~~~~~~d~i~GtSaGal~a~~~a~g 48 (175)
T cd07205 17 GVLKALEEAGIPIDIVSGTSAGAIVGALYAAG 48 (175)
T ss_pred HHHHHHHHcCCCeeEEEEECHHHHHHHHHHcC
Confidence 55666666655566789999999999998843
No 278
>COG3494 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=53.79 E-value=47 Score=26.32 Aligned_cols=59 Identities=17% Similarity=0.280 Sum_probs=41.9
Q ss_pred HHHHHHHHhcCcEEEEeccCCCCCccCCCCcccchHHHHhhcCCccccchHHHHHHHHHhcCCCeEEEEE
Q 025842 61 RKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSKGVSAIGAAG 130 (247)
Q Consensus 61 ~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G 130 (247)
..++.....+||.++.+-++ +... ++ |.......-...++-.++++++.++.+++.+.|
T Consensus 18 ~~va~~a~~~G~~~~ii~l~-~eaD--~~--------~~~~e~~~~~iG~vg~lik~l~~~~v~~vVl~G 76 (279)
T COG3494 18 LEVAENARNQGYAPFIIGLR-GEAD--PE--------LKEFEYKEVSIGEVGKLIKLLKTEGVDRVVLAG 76 (279)
T ss_pred HHHHHHHHhCCCCcEEEEec-Cccc--hh--------hhcCCCeEEeHHHHHHHHHHHHHcCCcEEEEec
Confidence 46888888999999999994 4322 11 222222233446788999999999988999887
No 279
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=52.82 E-value=19 Score=28.85 Aligned_cols=32 Identities=22% Similarity=0.352 Sum_probs=25.9
Q ss_pred HHHHHHHhcCCCeEEEEEecccHHHHHHhhcC
Q 025842 113 SVIAALKSKGVSAIGAAGFCWGGVVAAKLASS 144 (247)
Q Consensus 113 ~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~ 144 (247)
-+++.+.+.+..-=.+.|.|+|+.++..+|..
T Consensus 27 GVL~aLeE~gi~~d~v~GtSaGAiiga~ya~g 58 (269)
T cd07227 27 GILQALEEAGIPIDAIGGTSIGSFVGGLYARE 58 (269)
T ss_pred HHHHHHHHcCCCccEEEEECHHHHHHHHHHcC
Confidence 56777777776666789999999999998754
No 280
>PHA02519 plasmid partition protein SopA; Reviewed
Probab=52.69 E-value=21 Score=30.27 Aligned_cols=36 Identities=14% Similarity=-0.039 Sum_probs=25.6
Q ss_pred CeEEEEEc---CccCCCcchHHHHHHHHHhcCcEEEEecc
Q 025842 43 KSAILLIS---DVFGYEAPLFRKLADKVAGAGFLVVAPDF 79 (247)
Q Consensus 43 ~~~vv~~h---gg~g~~~~~~~~~a~~la~~G~~v~~~d~ 79 (247)
++.||.+. ||.|.+ ..-..+|..|+.+||.|+++|.
T Consensus 105 ~~~vIav~n~KGGVGKT-Tta~nLA~~LA~~G~rVLlIDl 143 (387)
T PHA02519 105 NPVVLAVMSHKGGVYKT-SSAVHTAQWLALQGHRVLLIEG 143 (387)
T ss_pred CceEEEEecCCCCCcHH-HHHHHHHHHHHhCCCcEEEEeC
Confidence 34455444 566643 3446788999999999999995
No 281
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=52.36 E-value=21 Score=27.35 Aligned_cols=33 Identities=24% Similarity=0.326 Sum_probs=25.4
Q ss_pred HHHHHHHhcCCCeEEEEEecccHHHHHHhhcCC
Q 025842 113 SVIAALKSKGVSAIGAAGFCWGGVVAAKLASSH 145 (247)
Q Consensus 113 ~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 145 (247)
-+++.|.+.+...-.+.|.|.|+..+..++...
T Consensus 15 Gvl~aL~e~g~~~d~i~GtS~GAl~aa~~a~~~ 47 (215)
T cd07209 15 GVLKALAEAGIEPDIISGTSIGAINGALIAGGD 47 (215)
T ss_pred HHHHHHHHcCCCCCEEEEECHHHHHHHHHHcCC
Confidence 456677777666667899999999999987543
No 282
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=51.33 E-value=19 Score=28.82 Aligned_cols=30 Identities=30% Similarity=0.241 Sum_probs=23.0
Q ss_pred HHHHHHHhcC-CCeEEEEEecccHHHHHHhh
Q 025842 113 SVIAALKSKG-VSAIGAAGFCWGGVVAAKLA 142 (247)
Q Consensus 113 ~~i~~l~~~~-~~~i~l~G~S~Gg~~a~~~a 142 (247)
+..+.+++.+ ..+-.++|||+|=+.|+.++
T Consensus 71 al~~~l~~~g~i~p~~v~GhS~GE~aAa~~a 101 (290)
T TIGR00128 71 ILYLKLKEQGGLKPDFAAGHSLGEYSALVAA 101 (290)
T ss_pred HHHHHHHHcCCCCCCEEeecCHHHHHHHHHh
Confidence 3445555555 77889999999999888876
No 283
>TIGR02069 cyanophycinase cyanophycinase. This model describes both cytosolic and extracellular cyanophycinases. The former are part of a system in many Cyanobacteria and a few other species of generating and later utilizing a storage polymer for nitrogen, carbon, and energy, called cyanophycin. The latter are found in species such as Pseudomonas anguilliseptica that can use external cyanophycin. The polymer has a backbone of L-aspartic acid, with most Asp side chain carboxyl groups attached to L-arginine.
Probab=50.99 E-value=99 Score=24.48 Aligned_cols=40 Identities=13% Similarity=0.086 Sum_probs=24.7
Q ss_pred CCCCeEEEEEcCccCCCcchHHHHHHHHHhcCcE-EEEecc
Q 025842 40 PDSKSAILLISDVFGYEAPLFRKLADKVAGAGFL-VVAPDF 79 (247)
Q Consensus 40 ~~~~~~vv~~hgg~g~~~~~~~~~a~~la~~G~~-v~~~d~ 79 (247)
.++.+.|++++-..+..........+.|.+.|+. |...+.
T Consensus 25 g~~~~rI~~iptAS~~~~~~~~~~~~~~~~lG~~~v~~l~i 65 (250)
T TIGR02069 25 GGEDAIIVIITSASEEPREVGERYITIFSRLGVKEVKILDV 65 (250)
T ss_pred CCCCceEEEEeCCCCChHHHHHHHHHHHHHcCCceeEEEec
Confidence 4456788898844333223345566778888984 555665
No 284
>COG4425 Predicted membrane protein [Function unknown]
Probab=50.24 E-value=35 Score=29.49 Aligned_cols=30 Identities=10% Similarity=0.001 Sum_probs=20.9
Q ss_pred HHHHHHHHHhcC---CCeEEEEEecccHHHHHH
Q 025842 111 AKSVIAALKSKG---VSAIGAAGFCWGGVVAAK 140 (247)
Q Consensus 111 ~~~~i~~l~~~~---~~~i~l~G~S~Gg~~a~~ 140 (247)
++++..+..+++ -.|.++.|-|+|++-...
T Consensus 381 f~aVy~yw~qLP~~sRPKLylhG~SLGa~~s~~ 413 (588)
T COG4425 381 FEAVYGYWTQLPKSSRPKLYLHGESLGAMGSEA 413 (588)
T ss_pred HHHHHHHHHhCCcCCCCceEEeccccccccCcc
Confidence 444455555553 359999999999986655
No 285
>KOG2585 consensus Uncharacterized conserved protein [Function unknown]
Probab=48.98 E-value=40 Score=28.92 Aligned_cols=40 Identities=10% Similarity=-0.069 Sum_probs=28.3
Q ss_pred CCCCCeEEEEEcCccCCCcchHHHHHHHHHhcCcEEEEecc
Q 025842 39 PPDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDF 79 (247)
Q Consensus 39 ~~~~~~~vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~ 79 (247)
+...+|.|+++. |.|.+...-.-.+++|+..||.++++-.
T Consensus 262 n~~~~P~V~Ilc-gpgnnggdg~v~gRHL~~~G~~~vi~~p 301 (453)
T KOG2585|consen 262 NSHQWPLVAILC-GPGNNGGDGLVCGRHLAQHGYTPVIYYP 301 (453)
T ss_pred ccCCCceEEEEe-CCCCccchhHHHHHHHHHcCceeEEEee
Confidence 334567788888 4454444445588999999999888765
No 286
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=48.68 E-value=46 Score=25.62 Aligned_cols=40 Identities=15% Similarity=0.149 Sum_probs=26.3
Q ss_pred CCCeEEEEEcCccCCCcc--hHHHHHHHHHhcCcEEEEeccC
Q 025842 41 DSKSAILLISDVFGYEAP--LFRKLADKVAGAGFLVVAPDFF 80 (247)
Q Consensus 41 ~~~~~vv~~hgg~g~~~~--~~~~~a~~la~~G~~v~~~d~~ 80 (247)
+..+.|.|++-..+.... ......+.|+++|+.+.-.+..
T Consensus 30 g~~~~i~FIPtAs~~~~~~~Yv~k~~~~l~~lg~~v~~L~l~ 71 (224)
T COG3340 30 GKRKTIAFIPTASVDSEDDFYVEKVRNALAKLGLEVSELHLS 71 (224)
T ss_pred CCCceEEEEecCccccchHHHHHHHHHHHHHcCCeeeeeecc
Confidence 345688898833332211 2345667888999999988873
No 287
>PRK06490 glutamine amidotransferase; Provisional
Probab=47.89 E-value=85 Score=24.60 Aligned_cols=18 Identities=22% Similarity=0.351 Sum_probs=14.4
Q ss_pred eEEEEEecccHHHHHHhh
Q 025842 125 AIGAAGFCWGGVVAAKLA 142 (247)
Q Consensus 125 ~i~l~G~S~Gg~~a~~~a 142 (247)
++=++|.|+|..+...+.
T Consensus 86 ~~PvLGIC~G~Qlla~al 103 (239)
T PRK06490 86 NKPFLGICLGAQMLARHL 103 (239)
T ss_pred CCCEEEECHhHHHHHHHc
Confidence 345899999999877764
No 288
>PLN03050 pyridoxine (pyridoxamine) 5'-phosphate oxidase; Provisional
Probab=47.67 E-value=42 Score=26.51 Aligned_cols=34 Identities=21% Similarity=0.075 Sum_probs=25.8
Q ss_pred eEEEEEcCccCCCcchHHHHHHHHHhcCcEEEEec
Q 025842 44 SAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPD 78 (247)
Q Consensus 44 ~~vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d 78 (247)
..|+++. |.|.+..+-.-+|++|..+||.|.++-
T Consensus 61 ~~V~Vlc-G~GNNGGDGlv~AR~L~~~G~~V~v~~ 94 (246)
T PLN03050 61 PRVLLVC-GPGNNGGDGLVAARHLAHFGYEVTVCY 94 (246)
T ss_pred CeEEEEE-CCCCCchhHHHHHHHHHHCCCeEEEEE
Confidence 3577777 556566666778999999999988775
No 289
>TIGR02873 spore_ylxY probable sporulation protein, polysaccharide deacetylase family. Members of this protein family are most closely related to TIGR02764, a subset of polysaccharide deacetylase family proteins found in a species if and only if the species forms endospores like those of Bacillus subtilis or Clostridium tetani. This family is likewise restricted to spore-formers, but is not universal among them in having sequences with full-length matches to the model.
Probab=47.58 E-value=26 Score=28.07 Aligned_cols=35 Identities=9% Similarity=0.156 Sum_probs=26.7
Q ss_pred CeEEEEEcCccCCCcchHHHHHHHHHhcCcEEEEec
Q 025842 43 KSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPD 78 (247)
Q Consensus 43 ~~~vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d 78 (247)
...||++|... .+...+..+.+.|.++||.++.++
T Consensus 230 ~G~IILmHd~~-~T~~aL~~iI~~Lk~kGy~fvtl~ 264 (268)
T TIGR02873 230 PGAMVLMHPTA-SSTEGLEEMITIIKEKGYKIGTIT 264 (268)
T ss_pred CCcEEEEcCCc-cHHHHHHHHHHHHHHCCCEEEeHH
Confidence 35688999543 345567788899999999998875
No 290
>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II. This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=46.91 E-value=1.1e+02 Score=25.08 Aligned_cols=21 Identities=24% Similarity=0.396 Sum_probs=15.2
Q ss_pred cchHHHHHHHHHhcCcEEEEe
Q 025842 57 APLFRKLADKVAGAGFLVVAP 77 (247)
Q Consensus 57 ~~~~~~~a~~la~~G~~v~~~ 77 (247)
.+.|..+++.|.++|+.++..
T Consensus 193 ~e~~~~li~~l~~~~~~ivl~ 213 (334)
T TIGR02195 193 HEHYAELAKRLIDQGYQVVLF 213 (334)
T ss_pred HHHHHHHHHHHHHCCCEEEEE
Confidence 345677888887778877765
No 291
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=46.39 E-value=31 Score=29.92 Aligned_cols=49 Identities=12% Similarity=0.074 Sum_probs=32.9
Q ss_pred chHHH-HHHHHHhc---CCCeEEEEEecccHHHHHHhhc-----C-----C--CccEEEEecCCC
Q 025842 109 VDAKS-VIAALKSK---GVSAIGAAGFCWGGVVAAKLAS-----S-----H--DIQAAVVLHPGA 157 (247)
Q Consensus 109 ~d~~~-~i~~l~~~---~~~~i~l~G~S~Gg~~a~~~a~-----~-----~--~i~~~v~~~~~~ 157 (247)
+|... +++|+.+. -..++.+.|-|.+|...-.+|. + + .++++++-+|..
T Consensus 149 ~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNLkG~~IGNg~t 213 (454)
T KOG1282|consen 149 KDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINLKGYAIGNGLT 213 (454)
T ss_pred HHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCcccceEEEecCccc
Confidence 44433 33555554 3469999999999987766651 1 2 788888777665
No 292
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=46.21 E-value=25 Score=28.65 Aligned_cols=31 Identities=35% Similarity=0.411 Sum_probs=26.4
Q ss_pred HHHHHHHhcCCCeEEEEEecccHHHHHHhhc
Q 025842 113 SVIAALKSKGVSAIGAAGFCWGGVVAAKLAS 143 (247)
Q Consensus 113 ~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~ 143 (247)
-+++.|.+.+...-.+.|-|+|+.++..+|.
T Consensus 28 GVl~aL~e~gi~~~~iaGtS~GAiva~l~A~ 58 (306)
T COG1752 28 GVLKALEEAGIPIDVIAGTSAGAIVAALYAA 58 (306)
T ss_pred HHHHHHHHcCCCccEEEecCHHHHHHHHHHc
Confidence 5677777778788889999999999999874
No 293
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=44.40 E-value=61 Score=24.34 Aligned_cols=39 Identities=21% Similarity=0.294 Sum_probs=27.5
Q ss_pred CCCeEEEEEcCccCCCcchH-HHHHHHHHhcCcEEEEecc
Q 025842 41 DSKSAILLISDVFGYEAPLF-RKLADKVAGAGFLVVAPDF 79 (247)
Q Consensus 41 ~~~~~vv~~hgg~g~~~~~~-~~~a~~la~~G~~v~~~d~ 79 (247)
+.++.+|++.|..|...... ..+.+.|.++|+.+...|-
T Consensus 20 ~~~~~viW~TGLSGsGKSTiA~ale~~L~~~G~~~y~LDG 59 (197)
T COG0529 20 GQKGAVIWFTGLSGSGKSTIANALEEKLFAKGYHVYLLDG 59 (197)
T ss_pred CCCCeEEEeecCCCCCHHHHHHHHHHHHHHcCCeEEEecC
Confidence 45678999997666433222 3466788889999999994
No 294
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=43.26 E-value=37 Score=27.89 Aligned_cols=37 Identities=14% Similarity=0.282 Sum_probs=27.9
Q ss_pred CCeEEEEEecccHHHHHHhhc-----C------C-CccEEEEecCCCCC
Q 025842 123 VSAIGAAGFCWGGVVAAKLAS-----S------H-DIQAAVVLHPGAIT 159 (247)
Q Consensus 123 ~~~i~l~G~S~Gg~~a~~~a~-----~------~-~i~~~v~~~~~~~~ 159 (247)
..++.|.|-|.||...-.+|. + . .++++++-+|....
T Consensus 50 ~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~~~inLkGi~IGNg~t~~ 98 (319)
T PLN02213 50 SNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPVTYM 98 (319)
T ss_pred cCCeEEEeeccccchHHHHHHHHHhhcccccCCceeeeEEEeCCCCCCc
Confidence 469999999999998777652 1 1 77888888876643
No 295
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=43.18 E-value=31 Score=26.90 Aligned_cols=33 Identities=33% Similarity=0.291 Sum_probs=24.9
Q ss_pred HHHHHHHhcCCC--eEEEEEecccHHHHHHhhcCC
Q 025842 113 SVIAALKSKGVS--AIGAAGFCWGGVVAAKLASSH 145 (247)
Q Consensus 113 ~~i~~l~~~~~~--~i~l~G~S~Gg~~a~~~a~~~ 145 (247)
-+++.|.+++.. .-.+.|-|.|+..+..++...
T Consensus 16 GVl~~L~e~gi~~~~~~i~G~SAGAl~aa~~asg~ 50 (233)
T cd07224 16 GVLSLLIEAGVINETTPLAGASAGSLAAACSASGL 50 (233)
T ss_pred HHHHHHHHcCCCCCCCEEEEEcHHHHHHHHHHcCC
Confidence 566777777543 447899999999999987543
No 296
>PRK13869 plasmid-partitioning protein RepA; Provisional
Probab=42.99 E-value=39 Score=28.92 Aligned_cols=35 Identities=23% Similarity=0.247 Sum_probs=25.1
Q ss_pred EEEEEc---CccCCCcchHHHHHHHHHhcCcEEEEeccC
Q 025842 45 AILLIS---DVFGYEAPLFRKLADKVAGAGFLVVAPDFF 80 (247)
Q Consensus 45 ~vv~~h---gg~g~~~~~~~~~a~~la~~G~~v~~~d~~ 80 (247)
.||.+. ||.|.+ ..-..+|..|+.+|+.|+++|.-
T Consensus 122 ~vIav~n~KGGvGKT-Tta~nLA~~LA~~G~rVLlIDlD 159 (405)
T PRK13869 122 QVIAVTNFKGGSGKT-TTSAHLAQYLALQGYRVLAVDLD 159 (405)
T ss_pred eEEEEEcCCCCCCHH-HHHHHHHHHHHhcCCceEEEcCC
Confidence 444444 566643 33467889999999999999983
No 297
>cd03409 Chelatase_Class_II Class II Chelatase: a family of ATP-independent monomeric or homodimeric enzymes that catalyze the insertion of metal into protoporphyrin rings. This family includes protoporphyrin IX ferrochelatase (HemH), sirohydrochlorin ferrochelatase (SirB) and the cobaltochelatases, CbiK and CbiX. HemH and SirB are involved in heme and siroheme biosynthesis, respectively, while the cobaltochelatases are associated with cobalamin biosynthesis. Excluded from this family are the ATP-dependent heterotrimeric chelatases (class I) and the multifunctional homodimeric enzymes with dehydrogenase and chelatase activities (class III).
Probab=42.66 E-value=92 Score=20.12 Aligned_cols=21 Identities=19% Similarity=0.281 Sum_probs=14.8
Q ss_pred chHHHHHHHHHhcCCCeEEEE
Q 025842 109 VDAKSVIAALKSKGVSAIGAA 129 (247)
Q Consensus 109 ~d~~~~i~~l~~~~~~~i~l~ 129 (247)
.++.++++.+.+.+.++|.++
T Consensus 45 P~i~~~l~~l~~~g~~~vvvv 65 (101)
T cd03409 45 PDTEEAIRELAEEGYQRVVIV 65 (101)
T ss_pred CCHHHHHHHHHHcCCCeEEEE
Confidence 446677888887777777663
No 298
>TIGR00632 vsr DNA mismatch endonuclease Vsr. All proteins in this family for which functions are known are G:T mismatch endonucleases that function in a specialized mismatch repair process used usually to repair G:T mismatches in specific sections of the genome. This family was based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). Members of this family typically are found near to a DNA cytosine methyltransferase.
Probab=41.52 E-value=43 Score=23.07 Aligned_cols=16 Identities=13% Similarity=0.208 Sum_probs=12.3
Q ss_pred HHHHHHhcCcEEEEec
Q 025842 63 LADKVAGAGFLVVAPD 78 (247)
Q Consensus 63 ~a~~la~~G~~v~~~d 78 (247)
....|.+.||.|+.+-
T Consensus 99 ~~~~L~~~Gw~Vlr~W 114 (117)
T TIGR00632 99 VNSRLQELGWRVLRVW 114 (117)
T ss_pred HHHHHHHCcCEEEEEe
Confidence 3457888999999863
No 299
>PLN02757 sirohydrochlorine ferrochelatase
Probab=41.48 E-value=1.4e+02 Score=21.71 Aligned_cols=21 Identities=14% Similarity=0.148 Sum_probs=13.6
Q ss_pred chHHHHHHHHHhcCCCeEEEE
Q 025842 109 VDAKSVIAALKSKGVSAIGAA 129 (247)
Q Consensus 109 ~d~~~~i~~l~~~~~~~i~l~ 129 (247)
.++.++++.+.+.+.++|.++
T Consensus 58 Psl~eal~~l~~~g~~~vvVv 78 (154)
T PLN02757 58 PSIKDAFGRCVEQGASRVIVS 78 (154)
T ss_pred CCHHHHHHHHHHCCCCEEEEE
Confidence 346666777766666777664
No 300
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=41.10 E-value=2.4e+02 Score=24.38 Aligned_cols=122 Identities=8% Similarity=-0.064 Sum_probs=69.4
Q ss_pred chHHHHHHHHHhc----CCCeEEEEEecccHHHHHHhh-cCCCccEEEE--ecCCCCCccccccccccEEEeecC--CCC
Q 025842 109 VDAKSVIAALKSK----GVSAIGAAGFCWGGVVAAKLA-SSHDIQAAVV--LHPGAITVDDINEIKVPVAILGAE--IDH 179 (247)
Q Consensus 109 ~d~~~~i~~l~~~----~~~~i~l~G~S~Gg~~a~~~a-~~~~i~~~v~--~~~~~~~~~~~~~~~~P~l~i~g~--~D~ 179 (247)
+.+...+++.+.. +++++++.+.+.++.-++... .++....+|. ++|.++....++ ..+-+.=+|+. +-.
T Consensus 128 qa~A~Fm~~~r~~~v~fdP~~~Vv~~G~T~ane~l~fcLadpgdafLvPtPyY~gfdrdl~~r-Tgveivpv~c~Ss~~f 206 (471)
T KOG0256|consen 128 QAVAEFMERARGNRVKFDPERVVVTNGATSANETLMFCLADPGDAFLVPTPYYPGFDRDLRWR-TGVEIVPVHCSSSNGF 206 (471)
T ss_pred HHHHHHHHHHhCCCCccCccceEEecccchhhHHHHHHhcCCCceeeecCCCCCcccccceec-cCceEEEEEeecCCCc
Confidence 4455666666654 678999999999998888744 5565555553 555553322222 22333334432 234
Q ss_pred CCCHHHHHHHHHHHHhccCCCeeEEEeCCCCccccccCCCCChHHHHHHHHHHHHHHHHHHHH
Q 025842 180 VSPPEDLKRFGEILSAKLKNDCLVKIYPRVSHGWTVRYNVEDEFAVKSAEEAHEDMINWLTKY 242 (247)
Q Consensus 180 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~ 242 (247)
.++.+..++.++.. ++.|.++.=+++-+ -|.-.... ...+....+++|..++
T Consensus 207 ~itv~alE~A~~~A-~~~~~kVkGvlitN-PsNPLG~~---------~~~e~L~~ll~Fa~~k 258 (471)
T KOG0256|consen 207 QITVEALEAALNQA-RKLGLKVKGVLITN-PSNPLGTT---------LSPEELISLLNFASRK 258 (471)
T ss_pred cccHHHHHHHHHHH-HHhCCceeEEEEeC-CCCCCCCc---------cCHHHHHHHHHHHhhc
Confidence 45666666666665 55566666555554 23221111 2356778888888653
No 301
>COG1058 CinA Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA [General function prediction only]
Probab=40.99 E-value=1e+02 Score=24.52 Aligned_cols=47 Identities=13% Similarity=0.063 Sum_probs=33.2
Q ss_pred chHHHHHHHHHhcCcEEEEeccCCCCCccCCCCcccchHHHHhhcCCccccchHHHHHHHHHhcCCCeEEEE
Q 025842 58 PLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSKGVSAIGAA 129 (247)
Q Consensus 58 ~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~ 129 (247)
.+...+++.|.++|+.|.-... -|+.. +++.+.++.+.+. .+-+++.
T Consensus 21 tNa~~la~~L~~~G~~v~~~~~-VgD~~-----------------------~~I~~~l~~a~~r-~D~vI~t 67 (255)
T COG1058 21 TNAAFLADELTELGVDLARITT-VGDNP-----------------------DRIVEALREASER-ADVVITT 67 (255)
T ss_pred chHHHHHHHHHhcCceEEEEEe-cCCCH-----------------------HHHHHHHHHHHhC-CCEEEEC
Confidence 3567899999999999988877 34332 6677777777776 4455543
No 302
>PRK07877 hypothetical protein; Provisional
Probab=40.94 E-value=1.5e+02 Score=27.62 Aligned_cols=78 Identities=17% Similarity=0.202 Sum_probs=51.6
Q ss_pred CCCeEEEEEecccHHHHHHhhcCCCccEEEEecCCCCCccccccccccEEEeecCCCCCCCHHHHHHHHHHHHhccCCCe
Q 025842 122 GVSAIGAAGFCWGGVVAAKLASSHDIQAAVVLHPGAITVDDINEIKVPVAILGAEIDHVSPPEDLKRFGEILSAKLKNDC 201 (247)
Q Consensus 122 ~~~~i~l~G~S~Gg~~a~~~a~~~~i~~~v~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~ 201 (247)
...+|.++|-+.|+.++..+|+..-+..+.++........++.++ ++...| +-...++.+.+.+ .+-|..+
T Consensus 106 ~~~~V~IvG~GlGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq------~~~~~d--iG~~Kv~~a~~~l-~~inp~i 176 (722)
T PRK07877 106 GRLRIGVVGLSVGHAIAHTLAAEGLCGELRLADFDTLELSNLNRV------PAGVFD--LGVNKAVVAARRI-AELDPYL 176 (722)
T ss_pred hcCCEEEEEecHHHHHHHHHHHccCCCeEEEEcCCEEcccccccc------cCChhh--cccHHHHHHHHHH-HHHCCCC
Confidence 346999999998888888888766567888888776666666552 244444 2344455566665 3344466
Q ss_pred eEEEeCC
Q 025842 202 LVKIYPR 208 (247)
Q Consensus 202 ~~~~~~~ 208 (247)
++..++.
T Consensus 177 ~v~~~~~ 183 (722)
T PRK07877 177 PVEVFTD 183 (722)
T ss_pred EEEEEec
Confidence 6776663
No 303
>PRK13705 plasmid-partitioning protein SopA; Provisional
Probab=40.50 E-value=37 Score=28.85 Aligned_cols=37 Identities=14% Similarity=0.039 Sum_probs=25.9
Q ss_pred CCeEEEEEc---CccCCCcchHHHHHHHHHhcCcEEEEecc
Q 025842 42 SKSAILLIS---DVFGYEAPLFRKLADKVAGAGFLVVAPDF 79 (247)
Q Consensus 42 ~~~~vv~~h---gg~g~~~~~~~~~a~~la~~G~~v~~~d~ 79 (247)
..+.||-+. ||.|.+ ..-..+|..|+.+|+.|+++|.
T Consensus 104 ~~~~vIai~n~KGGVGKT-T~a~nLA~~LA~~G~rVLlID~ 143 (388)
T PRK13705 104 VFPPVIGVAAHKGGVYKT-SVSVHLAQDLALKGLRVLLVEG 143 (388)
T ss_pred CCCeEEEEECCCCCchHH-HHHHHHHHHHHhcCCCeEEEcC
Confidence 344555555 555543 2345788899999999999995
No 304
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=40.45 E-value=54 Score=26.44 Aligned_cols=18 Identities=33% Similarity=0.248 Sum_probs=15.7
Q ss_pred EEEEecccHHHHHHhhcC
Q 025842 127 GAAGFCWGGVVAAKLASS 144 (247)
Q Consensus 127 ~l~G~S~Gg~~a~~~a~~ 144 (247)
.+.|.|.||.+++.++..
T Consensus 37 ~i~GTSaGaiia~~la~g 54 (288)
T cd07213 37 LFAGTSAGSLIALGLALG 54 (288)
T ss_pred EEEEeCHHHHHHHHHHcC
Confidence 689999999999998853
No 305
>COG1255 Uncharacterized protein conserved in archaea [Function unknown]
Probab=39.74 E-value=34 Score=23.48 Aligned_cols=22 Identities=36% Similarity=0.567 Sum_probs=19.4
Q ss_pred hHHHHHHHHHhcCcEEEEeccC
Q 025842 59 LFRKLADKVAGAGFLVVAPDFF 80 (247)
Q Consensus 59 ~~~~~a~~la~~G~~v~~~d~~ 80 (247)
.+...++.|+++||.|++.|.-
T Consensus 24 ~~~~VA~~L~e~g~dv~atDI~ 45 (129)
T COG1255 24 FFLDVAKRLAERGFDVLATDIN 45 (129)
T ss_pred hHHHHHHHHHHcCCcEEEEecc
Confidence 4568999999999999999984
No 306
>COG0505 CarA Carbamoylphosphate synthase small subunit [Amino acid transport and metabolism / Nucleotide transport and metabolism]
Probab=39.29 E-value=1.6e+02 Score=24.70 Aligned_cols=73 Identities=15% Similarity=0.098 Sum_probs=42.2
Q ss_pred HHHHHHHHhcCcEEEEeccCCCCCc----cCCCCcccchHHHHhhcCCccccchHHHHHHHHHhcCCCeEEEEEecccHH
Q 025842 61 RKLADKVAGAGFLVVAPDFFYGDPI----VDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSKGVSAIGAAGFCWGGV 136 (247)
Q Consensus 61 ~~~a~~la~~G~~v~~~d~~~g~~~----~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~ 136 (247)
+.+.+.|+++|+.|.++-+. -... ..|+.. + -++-....+.+..+++.+++.-..+|=++|.|+|=+
T Consensus 191 ~nIlr~L~~rg~~vtVVP~~-t~~eeIl~~~pDGi-------f-lSNGPGDP~~~~~~i~~ik~l~~~~iPifGICLGHQ 261 (368)
T COG0505 191 RNILRELVKRGCRVTVVPAD-TSAEEILALNPDGI-------F-LSNGPGDPAPLDYAIETIKELLGTKIPIFGICLGHQ 261 (368)
T ss_pred HHHHHHHHHCCCeEEEEcCC-CCHHHHHhhCCCEE-------E-EeCCCCChhHHHHHHHHHHHHhccCCCeEEEcHHHH
Confidence 45788999999999998873 1100 001100 0 001111124566667776665333446889999998
Q ss_pred HHHHhh
Q 025842 137 VAAKLA 142 (247)
Q Consensus 137 ~a~~~a 142 (247)
+...+.
T Consensus 262 llalA~ 267 (368)
T COG0505 262 LLALAL 267 (368)
T ss_pred HHHHhc
Confidence 866654
No 307
>COG0400 Predicted esterase [General function prediction only]
Probab=38.95 E-value=1.4e+02 Score=22.83 Aligned_cols=40 Identities=20% Similarity=0.037 Sum_probs=29.5
Q ss_pred CCCeEEEEEcCccCC--CcchHHHHHHHHHhcCcEEEEeccC
Q 025842 41 DSKSAILLISDVFGY--EAPLFRKLADKVAGAGFLVVAPDFF 80 (247)
Q Consensus 41 ~~~~~vv~~hgg~g~--~~~~~~~~a~~la~~G~~v~~~d~~ 80 (247)
-...+|+++||-... .......+.+.|.+.|..|..-++.
T Consensus 144 ~~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~~~~ 185 (207)
T COG0400 144 LAGTPILLSHGTEDPVVPLALAEALAEYLTASGADVEVRWHE 185 (207)
T ss_pred cCCCeEEEeccCcCCccCHHHHHHHHHHHHHcCCCEEEEEec
Confidence 356789999966553 3334456778888899999999884
No 308
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=38.62 E-value=35 Score=27.99 Aligned_cols=31 Identities=26% Similarity=0.230 Sum_probs=23.4
Q ss_pred HHHHHHHhc--CCCeEEEEEecccHHHHHHhhc
Q 025842 113 SVIAALKSK--GVSAIGAAGFCWGGVVAAKLAS 143 (247)
Q Consensus 113 ~~i~~l~~~--~~~~i~l~G~S~Gg~~a~~~a~ 143 (247)
++++.+.+. +..+.++.|||+|=+.|+.++.
T Consensus 72 a~~~~l~~~~~~~~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 72 AAYRVLAEQGLGVKPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred HHHHHHHHhcCCCCCceeecccHhHHHHHHHcc
Confidence 444555554 3678899999999999998774
No 309
>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional
Probab=38.40 E-value=2.3e+02 Score=23.43 Aligned_cols=21 Identities=24% Similarity=0.346 Sum_probs=15.3
Q ss_pred cchHHHHHHHHHhcCcEEEEe
Q 025842 57 APLFRKLADKVAGAGFLVVAP 77 (247)
Q Consensus 57 ~~~~~~~a~~la~~G~~v~~~ 77 (247)
.+.|..+++.|.+.|+.|+..
T Consensus 199 ~e~~a~l~~~l~~~~~~vvl~ 219 (348)
T PRK10916 199 HYHYAELAQQLIDEGYQVVLF 219 (348)
T ss_pred HHHHHHHHHHHHHCCCeEEEE
Confidence 335677888887778887765
No 310
>PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases.
Probab=38.35 E-value=1.1e+02 Score=22.99 Aligned_cols=103 Identities=16% Similarity=0.041 Sum_probs=52.3
Q ss_pred CCCcchHHHHHHHHHhcCcEEEEeccCCCCCccCCCCcccchH--HHHhhcCCccccchHHHHHHHHH---hc--CCCeE
Q 025842 54 GYEAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDRE--AWRKIHNTDKGYVDAKSVIAALK---SK--GVSAI 126 (247)
Q Consensus 54 g~~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~--~~~~~~~~~~~~~d~~~~i~~l~---~~--~~~~i 126 (247)
|+.+...+.++.+|.++|+.|.+.-..+..+.......+.+.- ........+...-|+.+++..+. .. ..+=+
T Consensus 17 GGfET~ve~L~~~l~~~g~~v~Vyc~~~~~~~~~~~y~gv~l~~i~~~~~g~~~si~yd~~sl~~al~~~~~~~~~~~ii 96 (185)
T PF09314_consen 17 GGFETFVEELAPRLVSKGIDVTVYCRSDYYPYKEFEYNGVRLVYIPAPKNGSAESIIYDFLSLLHALRFIKQDKIKYDII 96 (185)
T ss_pred CcHHHHHHHHHHHHhcCCceEEEEEccCCCCCCCcccCCeEEEEeCCCCCCchHHHHHHHHHHHHHHHHHhhccccCCEE
Confidence 4444556778888888898877776542211100111111100 00000112233345656555553 21 23467
Q ss_pred EEEEecccHHHHHHhhcCC--CccEEEEecCC
Q 025842 127 GAAGFCWGGVVAAKLASSH--DIQAAVVLHPG 156 (247)
Q Consensus 127 ~l~G~S~Gg~~a~~~a~~~--~i~~~v~~~~~ 156 (247)
.++|.+.|+.+...+-.-. .++-++..++.
T Consensus 97 ~ilg~~~g~~~~~~~r~~~~~g~~v~vN~DGl 128 (185)
T PF09314_consen 97 LILGYGIGPFFLPFLRKLRKKGGKVVVNMDGL 128 (185)
T ss_pred EEEcCCccHHHHHHHHhhhhcCCcEEECCCcc
Confidence 7899999998887765443 44555555543
No 311
>COG3233 Predicted deacetylase [General function prediction only]
Probab=38.13 E-value=1.9e+02 Score=22.52 Aligned_cols=39 Identities=21% Similarity=0.298 Sum_probs=23.2
Q ss_pred eEEEEEcCccCCCcchHHHHHHHHHh---cCcE--EEEeccCCCC
Q 025842 44 SAILLISDVFGYEAPLFRKLADKVAG---AGFL--VVAPDFFYGD 83 (247)
Q Consensus 44 ~~vv~~hgg~g~~~~~~~~~a~~la~---~G~~--v~~~d~~~g~ 83 (247)
+.++++|...+........+...+.+ ++-. .++|++ ++.
T Consensus 4 ~~iillhdVSpv~~~~~~~i~~~ide~~~~~~t~lLViPn~-~~~ 47 (233)
T COG3233 4 PLIILLHDVSPVYWPTLSNIDAAIDEYGAQNSTVLLVIPNH-AND 47 (233)
T ss_pred cceEEEEecCcccchhHHHHHHHHHHhCCCCceEEEEeecc-CCC
Confidence 37899997766555555555544444 3433 477777 443
No 312
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=37.86 E-value=2e+02 Score=22.56 Aligned_cols=39 Identities=15% Similarity=0.040 Sum_probs=24.1
Q ss_pred CCeEEEEEcCccCC-Ccc-hHHHHHHHHHhcCcEEEEeccC
Q 025842 42 SKSAILLISDVFGY-EAP-LFRKLADKVAGAGFLVVAPDFF 80 (247)
Q Consensus 42 ~~~~vv~~hgg~g~-~~~-~~~~~a~~la~~G~~v~~~d~~ 80 (247)
..+.|+|++-.... ... .....-+.+.+.|+.|..++..
T Consensus 30 ~~~~v~fIPtAs~~~~~~~y~~~~~~af~~lG~~v~~l~~~ 70 (233)
T PRK05282 30 GRRKAVFIPYAGVTQSWDDYTAKVAEALAPLGIEVTGIHRV 70 (233)
T ss_pred CCCeEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEeccc
Confidence 34678898833221 112 2344556777889998888763
No 313
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=37.77 E-value=43 Score=24.12 Aligned_cols=30 Identities=37% Similarity=0.411 Sum_probs=22.2
Q ss_pred HHHHHHHhcCC--CeEEEEEecccHHHHHHhh
Q 025842 113 SVIAALKSKGV--SAIGAAGFCWGGVVAAKLA 142 (247)
Q Consensus 113 ~~i~~l~~~~~--~~i~l~G~S~Gg~~a~~~a 142 (247)
-+++.+.+++. .--.+.|.|.|+.++..++
T Consensus 15 gvl~~l~~~~~~~~~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 15 GVLSALAERGLLDCVTYLAGTSGGAWVAATLY 46 (155)
T ss_pred HHHHHHHHhCCccCCCEEEEEcHHHHHHHHHh
Confidence 44555555544 5567889999999999988
No 314
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=37.63 E-value=40 Score=26.71 Aligned_cols=31 Identities=26% Similarity=0.244 Sum_probs=23.4
Q ss_pred HHHHHHHhcCCC-eEEEEEecccHHHHHHhhc
Q 025842 113 SVIAALKSKGVS-AIGAAGFCWGGVVAAKLAS 143 (247)
Q Consensus 113 ~~i~~l~~~~~~-~i~l~G~S~Gg~~a~~~a~ 143 (247)
.+++.+.+.+.. -=.+.|.|.|+.++..++.
T Consensus 15 Gvl~al~e~~~~~fd~i~GtSaGAi~a~~~~~ 46 (266)
T cd07208 15 GVLDAFLEAGIRPFDLVIGVSAGALNAASYLS 46 (266)
T ss_pred HHHHHHHHcCCCCCCEEEEECHHHHhHHHHHh
Confidence 556677666554 4478999999999998763
No 315
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=37.44 E-value=55 Score=27.51 Aligned_cols=32 Identities=34% Similarity=0.331 Sum_probs=26.2
Q ss_pred EEEEcCccCCCcchHHHHHHHHHhcCcEEEEeccC
Q 025842 46 ILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF 80 (247)
Q Consensus 46 vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~~ 80 (247)
|||+|..+.. -++.+++.|+++|+.|.++-..
T Consensus 2 il~~~~~~p~---~~~~la~~L~~~G~~v~~~~~~ 33 (396)
T cd03818 2 ILFVHQNFPG---QFRHLAPALAAQGHEVVFLTEP 33 (396)
T ss_pred EEEECCCCch---hHHHHHHHHHHCCCEEEEEecC
Confidence 7899976653 3578999999999999998774
No 316
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=37.23 E-value=41 Score=26.46 Aligned_cols=32 Identities=31% Similarity=0.336 Sum_probs=23.4
Q ss_pred HHHHHHHhcCCC---eE-EEEEecccHHHHHHhhcC
Q 025842 113 SVIAALKSKGVS---AI-GAAGFCWGGVVAAKLASS 144 (247)
Q Consensus 113 ~~i~~l~~~~~~---~i-~l~G~S~Gg~~a~~~a~~ 144 (247)
-+++.|.+.+.. ++ .+.|-|+|+..+..++..
T Consensus 16 GVl~~L~e~g~~l~~~~~~i~GtSaGAl~aa~~a~~ 51 (246)
T cd07222 16 GAAKALLRHGKKLLKRVKRFAGASAGSLVAAVLLTA 51 (246)
T ss_pred HHHHHHHHcCchhhccCCEEEEECHHHHHHHHHhcC
Confidence 456666666542 23 689999999999998743
No 317
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=37.01 E-value=67 Score=28.35 Aligned_cols=37 Identities=19% Similarity=0.310 Sum_probs=27.2
Q ss_pred cCCCeEEEEEecccHHHHHHh----hcCC---CccEEEEecCCC
Q 025842 121 KGVSAIGAAGFCWGGVVAAKL----ASSH---DIQAAVVLHPGA 157 (247)
Q Consensus 121 ~~~~~i~l~G~S~Gg~~a~~~----a~~~---~i~~~v~~~~~~ 157 (247)
++..+|-++|||+|+..-+.+ +... -|..+++++...
T Consensus 444 qG~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv 487 (633)
T KOG2385|consen 444 QGNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPV 487 (633)
T ss_pred cCCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCc
Confidence 377899999999999997743 3322 677777777554
No 318
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=35.60 E-value=87 Score=22.79 Aligned_cols=38 Identities=18% Similarity=0.209 Sum_probs=25.0
Q ss_pred CeEEEEEcCccCCCcchH-HHHHHHHHhcCcEEEEeccC
Q 025842 43 KSAILLISDVFGYEAPLF-RKLADKVAGAGFLVVAPDFF 80 (247)
Q Consensus 43 ~~~vv~~hgg~g~~~~~~-~~~a~~la~~G~~v~~~d~~ 80 (247)
++.||++-|..|...... ..+.+.|.++|+.|+..|--
T Consensus 1 ~g~vIwltGlsGsGKtTlA~~L~~~L~~~g~~~~~LDgD 39 (156)
T PF01583_consen 1 KGFVIWLTGLSGSGKTTLARALERRLFARGIKVYLLDGD 39 (156)
T ss_dssp S-EEEEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEEHH
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEecCc
Confidence 367889997666443222 45667777889999999853
No 319
>PHA02518 ParA-like protein; Provisional
Probab=35.42 E-value=59 Score=24.41 Aligned_cols=29 Identities=21% Similarity=0.146 Sum_probs=22.2
Q ss_pred CccCCCcchHHHHHHHHHhcCcEEEEeccC
Q 025842 51 DVFGYEAPLFRKLADKVAGAGFLVVAPDFF 80 (247)
Q Consensus 51 gg~g~~~~~~~~~a~~la~~G~~v~~~d~~ 80 (247)
||.|.+ ..-..++..|+.+|+.|+++|.-
T Consensus 10 GGvGKT-T~a~~la~~la~~g~~vlliD~D 38 (211)
T PHA02518 10 GGAGKT-TVATNLASWLHADGHKVLLVDLD 38 (211)
T ss_pred CCCCHH-HHHHHHHHHHHhCCCeEEEEeCC
Confidence 555543 34467888999999999999993
No 320
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=35.40 E-value=49 Score=27.13 Aligned_cols=18 Identities=33% Similarity=0.381 Sum_probs=15.7
Q ss_pred EEEEecccHHHHHHhhcC
Q 025842 127 GAAGFCWGGVVAAKLASS 144 (247)
Q Consensus 127 ~l~G~S~Gg~~a~~~a~~ 144 (247)
.+.|.|+||.+|+.++..
T Consensus 35 ~i~GTStGgiIA~~la~g 52 (312)
T cd07212 35 WIAGTSTGGILALALLHG 52 (312)
T ss_pred EEEeeChHHHHHHHHHcC
Confidence 478999999999998853
No 321
>PF11394 DUF2875: Protein of unknown function (DUF2875); InterPro: IPR021531 This family of proteins with unknown function appear to be restricted to Proteobacteria.
Probab=35.32 E-value=80 Score=26.98 Aligned_cols=67 Identities=9% Similarity=0.095 Sum_probs=38.0
Q ss_pred cccccccEEEeecCCCCCCCHHHHHHHHHHHHhccCCCeeEEEeCCCCccccccCCCCChHHHHHHHHHHHHHHHHHHHH
Q 025842 163 INEIKVPVAILGAEIDHVSPPEDLKRFGEILSAKLKNDCLVKIYPRVSHGWTVRYNVEDEFAVKSAEEAHEDMINWLTKY 242 (247)
Q Consensus 163 ~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~ 242 (247)
+.....|++++.--++...+...+..+...- ++.+-.+++.+..+..|. ...+.+++++.+||+.+
T Consensus 75 VeyWPIPvf~~gPP~~~~~~~r~A~~I~~~R-~~A~LGvtl~lwqed~nt-------------~~~q~~iErLF~FFD~n 140 (451)
T PF11394_consen 75 VEYWPIPVFAWGPPKPPDDPYRAASNINDGR-QAAGLGVTLFLWQEDANT-------------DHAQGMIERLFQFFDDN 140 (451)
T ss_pred hhhCCCceEEeCCCCCccccccHHHHhhccc-cccccceeEEEeeccccc-------------cCHHHHHHHHHHHHhcC
Confidence 3445567777665554433333333333322 444556666666655443 24578999999999876
Q ss_pred h
Q 025842 243 V 243 (247)
Q Consensus 243 ~ 243 (247)
-
T Consensus 141 P 141 (451)
T PF11394_consen 141 P 141 (451)
T ss_pred C
Confidence 4
No 322
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=35.11 E-value=45 Score=28.73 Aligned_cols=31 Identities=29% Similarity=0.275 Sum_probs=24.1
Q ss_pred HHHHHHHhcCCCeEEEEEecccHHHHHHhhc
Q 025842 113 SVIAALKSKGVSAIGAAGFCWGGVVAAKLAS 143 (247)
Q Consensus 113 ~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~ 143 (247)
-+++.|.+.+..+=.+.|-|.|+.+|..++.
T Consensus 90 GVLkaL~E~gl~p~vIsGTSaGAivAal~as 120 (421)
T cd07230 90 GVLKALFEANLLPRIISGSSAGSIVAAILCT 120 (421)
T ss_pred HHHHHHHHcCCCCCEEEEECHHHHHHHHHHc
Confidence 5567776666555579999999999988774
No 323
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=34.83 E-value=74 Score=24.74 Aligned_cols=36 Identities=25% Similarity=0.206 Sum_probs=24.2
Q ss_pred CeEEEEEcCccCCCcchHHHHHHHHHhcCcEEEEeccC
Q 025842 43 KSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF 80 (247)
Q Consensus 43 ~~~vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~~ 80 (247)
.+..|++.|+..+. --..++..|++.||.|++-..+
T Consensus 6 ~~k~VlItgcs~GG--IG~ala~ef~~~G~~V~AtaR~ 41 (289)
T KOG1209|consen 6 QPKKVLITGCSSGG--IGYALAKEFARNGYLVYATARR 41 (289)
T ss_pred CCCeEEEeecCCcc--hhHHHHHHHHhCCeEEEEEccc
Confidence 45566666444322 2246899999999999987754
No 324
>TIGR03453 partition_RepA plasmid partitioning protein RepA. Members of this family are the RepA (or ParA) protein involved in replicon partitioning. All known examples occur in bacterial species with two or more replicons, on a plasmid or the smaller chromosome. Note that an apparent exception may be seen as a pseudomolecule from assembly of an incompletely sequenced genome. Members of this family belong to a larger family that also includes the enzyme cobyrinic acid a,c-diamide synthase, but assignment of that name to members of this family would be in error.
Probab=34.70 E-value=60 Score=27.47 Aligned_cols=37 Identities=22% Similarity=0.214 Sum_probs=25.1
Q ss_pred CeEEEEEc---CccCCCcchHHHHHHHHHhcCcEEEEeccC
Q 025842 43 KSAILLIS---DVFGYEAPLFRKLADKVAGAGFLVVAPDFF 80 (247)
Q Consensus 43 ~~~vv~~h---gg~g~~~~~~~~~a~~la~~G~~v~~~d~~ 80 (247)
+..||.+. ||.|.+ ..-..+|..|+.+|+.|+++|.=
T Consensus 103 ~~~vI~v~n~KGGvGKT-T~a~nLA~~La~~G~rVLlID~D 142 (387)
T TIGR03453 103 HLQVIAVTNFKGGSGKT-TTAAHLAQYLALRGYRVLAIDLD 142 (387)
T ss_pred CceEEEEEccCCCcCHH-HHHHHHHHHHHhcCCCEEEEecC
Confidence 33444444 455543 23457888999999999999984
No 325
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=34.64 E-value=54 Score=25.73 Aligned_cols=32 Identities=28% Similarity=0.305 Sum_probs=23.1
Q ss_pred HHHHHHHhcCCC--e--EEEEEecccHHHHHHhhcC
Q 025842 113 SVIAALKSKGVS--A--IGAAGFCWGGVVAAKLASS 144 (247)
Q Consensus 113 ~~i~~l~~~~~~--~--i~l~G~S~Gg~~a~~~a~~ 144 (247)
-+++.|.+.+.. + -.+.|-|.|+.++..++..
T Consensus 16 GVl~~L~e~g~~l~~~~~~i~GtSAGAl~aa~~a~g 51 (243)
T cd07204 16 GVASALREHAPRLLQNARRIAGASAGAIVAAVVLCG 51 (243)
T ss_pred HHHHHHHHcCcccccCCCEEEEEcHHHHHHHHHHhC
Confidence 456666666543 1 2789999999999998743
No 326
>PF01656 CbiA: CobQ/CobB/MinD/ParA nucleotide binding domain; InterPro: IPR002586 This entry consists of various cobyrinic acid a,c-diamide synthases. These include CbiA and CbiP from Salmonella typhimurium []., and CobQ from Rhodobacter capsulatus []. These amidases catalyse amidations to various side chains of hydrogenobyrinic acid or cobyrinic acid a,c-diamide in the biosynthesis of cobalamin (vitamin B12) from uroporphyrinogen III. Vitamin B12 is an important cofactor and an essential nutrient for many plants and animals and is primarily produced by bacteria [].; PDB: 3K9G_A 3K9H_B 3EZ9_B 3EZF_A 3EZ2_B 3EZ6_A 3EZ7_A 1G3Q_A 1G3R_A 1DTS_A ....
Probab=34.40 E-value=67 Score=23.61 Aligned_cols=21 Identities=29% Similarity=0.314 Sum_probs=17.4
Q ss_pred hHHHHHHHHHhcCcEEEEecc
Q 025842 59 LFRKLADKVAGAGFLVVAPDF 79 (247)
Q Consensus 59 ~~~~~a~~la~~G~~v~~~d~ 79 (247)
.-..+|..|+.+|+.|+.+|.
T Consensus 15 ~a~~la~~la~~g~~VlliD~ 35 (195)
T PF01656_consen 15 IAANLAQALARKGKKVLLIDL 35 (195)
T ss_dssp HHHHHHHHHHHTTS-EEEEEE
T ss_pred HHHHHHhcccccccccccccc
Confidence 345789999999999999998
No 327
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=34.11 E-value=92 Score=26.03 Aligned_cols=37 Identities=22% Similarity=0.194 Sum_probs=28.6
Q ss_pred eEEEEE-cCccCCCcchHHHHHHHHHhcCcEEEEeccC
Q 025842 44 SAILLI-SDVFGYEAPLFRKLADKVAGAGFLVVAPDFF 80 (247)
Q Consensus 44 ~~vv~~-hgg~g~~~~~~~~~a~~la~~G~~v~~~d~~ 80 (247)
+.+|++ +..++.....-+.++..|+++|+.|+.++..
T Consensus 5 ~~~~~~~~~~w~~~~~~~qhl~~~~a~~~~~vl~v~~~ 42 (373)
T cd04950 5 PDILVFSADDWDFLWQRPQHLAARLAERGNRVLYVEPP 42 (373)
T ss_pred CeEEEecccCcCCCCCCHHHHHHHHHhCCCeEEEEeCC
Confidence 445555 5566666667789999999899999999984
No 328
>TIGR01303 IMP_DH_rel_1 IMP dehydrogenase family protein. This model represents a family of proteins, often annotated as a putative IMP dehydrogenase, related to IMP dehydrogenase and GMP reductase and restricted to the high GC Gram-positive bacteria. All species in which a member is found so far (Corynebacterium glutamicum, Mycobacterium tuberculosis, Streptomyces coelicolor, etc.) also have IMP dehydrogenase as described by TIGRFAMs entry TIGR01302.
Probab=34.07 E-value=2.4e+02 Score=24.87 Aligned_cols=61 Identities=21% Similarity=0.091 Sum_probs=42.3
Q ss_pred chHHHHHHHHHhcCcEEEEeccCCCCCccCCCCcccchHHHHhhcCCccccchHHHHHHHHHhcCCCeEEEEEecccHHH
Q 025842 58 PLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSKGVSAIGAAGFCWGGVV 137 (247)
Q Consensus 58 ~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~ 137 (247)
......+..|.++|..++++|.-||.+ ..+..+++++++.-++-..+.|..+-...
T Consensus 224 ~~~~~ra~~Lv~aGVd~i~~D~a~g~~------------------------~~~~~~i~~i~~~~~~~~vi~g~~~t~~~ 279 (475)
T TIGR01303 224 GDVGGKAKALLDAGVDVLVIDTAHGHQ------------------------VKMISAIKAVRALDLGVPIVAGNVVSAEG 279 (475)
T ss_pred ccHHHHHHHHHHhCCCEEEEeCCCCCc------------------------HHHHHHHHHHHHHCCCCeEEEeccCCHHH
Confidence 345678889999999999999866543 23556777887764445556676666666
Q ss_pred HHHhh
Q 025842 138 AAKLA 142 (247)
Q Consensus 138 a~~~a 142 (247)
+..+.
T Consensus 280 ~~~l~ 284 (475)
T TIGR01303 280 VRDLL 284 (475)
T ss_pred HHHHH
Confidence 66555
No 329
>COG0518 GuaA GMP synthase - Glutamine amidotransferase domain [Nucleotide transport and metabolism]
Probab=33.63 E-value=2.1e+02 Score=21.70 Aligned_cols=32 Identities=25% Similarity=0.320 Sum_probs=24.1
Q ss_pred HHHHHHHHHhcCCCeEEEEEecccHHHHHHhh
Q 025842 111 AKSVIAALKSKGVSAIGAAGFCWGGVVAAKLA 142 (247)
Q Consensus 111 ~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a 142 (247)
+....+++.+......-++|.|+|..+.....
T Consensus 65 ~~~~~~~i~~~~~p~~pvLGIC~G~Ql~A~~l 96 (198)
T COG0518 65 LPREKDLIKDAGVPGKPVLGICLGHQLLAKAL 96 (198)
T ss_pred chhHHHHHHHhCCCCCCEEEEChhHHHHHHHh
Confidence 66777777777544446889999999877754
No 330
>COG0062 Uncharacterized conserved protein [Function unknown]
Probab=33.38 E-value=92 Score=23.82 Aligned_cols=36 Identities=17% Similarity=0.103 Sum_probs=26.8
Q ss_pred CeEEEEEcCccCCCcchHHHHHHHHHhcCcEEEEecc
Q 025842 43 KSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDF 79 (247)
Q Consensus 43 ~~~vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~ 79 (247)
...|+++. |.|.+..+-.-.|++|...||.|.++-.
T Consensus 49 ~~~v~vlc-G~GnNGGDG~VaAR~L~~~G~~V~v~~~ 84 (203)
T COG0062 49 ARRVLVLC-GPGNNGGDGLVAARHLKAAGYAVTVLLL 84 (203)
T ss_pred CCEEEEEE-CCCCccHHHHHHHHHHHhCCCceEEEEe
Confidence 45577777 4555555666788999999999988886
No 331
>PF06180 CbiK: Cobalt chelatase (CbiK); InterPro: IPR010388 This group, typified by Salmonella typhimurium CbiK, contains anaerobic cobalt chelatases that act in the anaerobic cobalamin biosynthesis pathway [, ]. Cobalamin (vitamin B12) can be complexed with metal via ATP-dependent reactions (aerobic pathway) (e.g., in Pseudomonas denitrificans) or via ATP-independent reactions (anaerobic pathway) (e.g., in S. typhimurium) [, ]. The corresponding cobalt chelatases are not homologous. This group belongs to the class of ATP-independent, single-subunit chelatases that also includes distantly related protoporphyrin IX (PPIX) ferrochelatase (HemH) (Class II chelatases) []. The structure of S. typhimurium CbiK shows that it has a remarkably similar topology to Bacillus subtilis ferrochelatase despite only weak sequence conservation []. Both enzymes contain a histidine residue identified as the metal ion ligand, but CbiK contains a second histidine in place of the glutamic acid residue identified as a general base in PPIX ferrochelatase []. Site-directed mutagenesis has confirmed a role for this histidine and a nearby glutamic acid in cobalt binding, modulating metal ion specificity as well as catalytic efficiency []. It should be noted that CysG and Met8p, which are multifunctional proteins associated with siroheme biosynthesis, include chelatase activity and can therefore be considered as the third class of chelatases []. As with the class II chelatases, they do not require ATP for activity. However, they are not structurally similar to HemH or CbiK, and it is likely that they have arisen by the acquisition of a chelatase function within a dehydrogenase catalytic framework [, ].; GO: 0016852 sirohydrochlorin cobaltochelatase activity; PDB: 1QGO_A 2XWP_A 2XVZ_A 2XVX_A 2XVY_A.
Probab=33.37 E-value=1.4e+02 Score=23.86 Aligned_cols=61 Identities=21% Similarity=0.285 Sum_probs=31.1
Q ss_pred CCeEEEEEcCccCCC-cchHHHHHHHHHhcCcE-EEEeccCCCCCccCCCCcccchHHHHhhcCCccccchHHHHHHHHH
Q 025842 42 SKSAILLISDVFGYE-APLFRKLADKVAGAGFL-VVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALK 119 (247)
Q Consensus 42 ~~~~vv~~hgg~g~~-~~~~~~~a~~la~~G~~-v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~ 119 (247)
+..++||+.||.... ...|..+...|.+.|+. |++--. .|. .++..+++.|+
T Consensus 140 ~~~a~vlmGHGt~h~an~~Y~~l~~~l~~~~~~~v~vgtv-EG~-------------------------P~~~~vi~~L~ 193 (262)
T PF06180_consen 140 KDEAVVLMGHGTPHPANAAYSALQAMLKKHGYPNVFVGTV-EGY-------------------------PSLEDVIARLK 193 (262)
T ss_dssp TTEEEEEEE---SCHHHHHHHHHHHHHHCCT-TTEEEEET-TSS-------------------------SBHHHHHHHHH
T ss_pred CCCEEEEEeCCCCCCccHHHHHHHHHHHhCCCCeEEEEEe-CCC-------------------------CCHHHHHHHHH
Confidence 455666666565532 22345666777776632 333333 233 33567788888
Q ss_pred hcCCCeEEE
Q 025842 120 SKGVSAIGA 128 (247)
Q Consensus 120 ~~~~~~i~l 128 (247)
+.+..++.+
T Consensus 194 ~~g~k~V~L 202 (262)
T PF06180_consen 194 KKGIKKVHL 202 (262)
T ss_dssp HHT-SEEEE
T ss_pred hcCCCeEEE
Confidence 777666543
No 332
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=33.11 E-value=76 Score=27.26 Aligned_cols=42 Identities=12% Similarity=0.025 Sum_probs=25.0
Q ss_pred ccEEEeecCCCCCCCHHHHHHHHHHHHhccCCCeeEEEeCCCCccccccC
Q 025842 168 VPVAILGAEIDHVSPPEDLKRFGEILSAKLKNDCLVKIYPRVSHGWTVRY 217 (247)
Q Consensus 168 ~P~l~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~H~~~~~~ 217 (247)
..+++.+|..||..... ..+. .......++++|+.|......
T Consensus 377 tnviFtNG~~DPW~~lg----v~~~----~~~~~~~~~I~g~~Hc~Dl~~ 418 (434)
T PF05577_consen 377 TNVIFTNGELDPWRALG----VTSD----SSDSVPAIVIPGGAHCSDLYP 418 (434)
T ss_dssp -SEEEEEETT-CCGGGS------S-----SSSSEEEEEETT--TTGGGS-
T ss_pred CeEEeeCCCCCCccccc----CCCC----CCCCcccEEECCCeeeccccC
Confidence 47999999999986544 1111 222556678999999987653
No 333
>cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists of eukaryotic and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH
Probab=33.03 E-value=1.6e+02 Score=23.87 Aligned_cols=74 Identities=14% Similarity=0.143 Sum_probs=37.0
Q ss_pred HHHHHHHHhcCc-------EEEEeccCCCCCccCCCCcccchHHHHhhcCCccccchHHHHHHHHHhcCCCeEEEEEecc
Q 025842 61 RKLADKVAGAGF-------LVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSKGVSAIGAAGFCW 133 (247)
Q Consensus 61 ~~~a~~la~~G~-------~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~ 133 (247)
+.+...+.++|. .++.+|. .|.-..+..+.......+.+. ..+....++.++++.+ ++-+++|.|-
T Consensus 42 ~ll~~~~~~~G~~~eeA~~~i~~vD~-~Gll~~~r~~l~~~~~~~a~~-~~~~~~~~L~e~i~~v-----~ptvlIG~S~ 114 (279)
T cd05312 42 DLIVSAMVREGLSEEEARKKIWLVDS-KGLLTKDRKDLTPFKKPFARK-DEEKEGKSLLEVVKAV-----KPTVLIGLSG 114 (279)
T ss_pred HHHHHHHHHcCCChhhccCeEEEEcC-CCeEeCCCCcchHHHHHHHhh-cCcccCCCHHHHHHhc-----CCCEEEEeCC
Confidence 344555556687 8999998 564220111111111122221 1111234566666554 3558999994
Q ss_pred -cHHHHHHh
Q 025842 134 -GGVVAAKL 141 (247)
Q Consensus 134 -Gg~~a~~~ 141 (247)
||.++-..
T Consensus 115 ~~g~ft~ev 123 (279)
T cd05312 115 VGGAFTEEV 123 (279)
T ss_pred CCCCCCHHH
Confidence 77665543
No 334
>KOG4231 consensus Intracellular membrane-bound Ca2+-independent phospholipase A2 [Lipid transport and metabolism]
Probab=32.61 E-value=54 Score=28.90 Aligned_cols=52 Identities=19% Similarity=0.275 Sum_probs=32.2
Q ss_pred HhcCcEEEEeccCCCCCccCCCCcccchHHHHhhcCCccccchHHHHHHHHHhcCCCeE-----EEEEecccHHHHHHhh
Q 025842 68 AGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSKGVSAI-----GAAGFCWGGVVAAKLA 142 (247)
Q Consensus 68 a~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i-----~l~G~S~Gg~~a~~~a 142 (247)
..+|.+++++|- .|... -....+++.+.+...++| .+-|.|.||.+|..+.
T Consensus 413 kg~G~rILSiDG-GGtrG-----------------------~~~lqiL~kieklsgKpIheLFD~ICGvSTG~ilA~~Lg 468 (763)
T KOG4231|consen 413 KGQGLRILSIDG-GGTRG-----------------------LATLQILKKIEKLSGKPIHELFDLICGVSTGGILAIALG 468 (763)
T ss_pred CCCceEEEEecC-CCccc-----------------------hhHHHHHHHHHHhcCCcHHHHHHHHhccCchHHHHHHHH
Confidence 356899999997 44322 112233444444433333 2679999999999987
Q ss_pred c
Q 025842 143 S 143 (247)
Q Consensus 143 ~ 143 (247)
.
T Consensus 469 ~ 469 (763)
T KOG4231|consen 469 V 469 (763)
T ss_pred h
Confidence 4
No 335
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=32.58 E-value=2.9e+02 Score=23.81 Aligned_cols=104 Identities=22% Similarity=0.166 Sum_probs=56.6
Q ss_pred CCCeEEEEEcCccCCCcchHHHHHHHHHhcCcEEEEeccCCCCCccCCCCcccchHHHHhhcCCccccchHHHHHHHHHh
Q 025842 41 DSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKS 120 (247)
Q Consensus 41 ~~~~~vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~ 120 (247)
.....|+++..-.|.. .--...++.+..+|+.|+-.|.. +.-. ........+ -+ .+.|+++..+.++.
T Consensus 46 ~~~~~villSd~~G~~-d~~~s~a~al~~~~Alv~~vd~~-~yla-aL~~dd~ec--vy-------lisd~Ealsr~~Qr 113 (456)
T COG3946 46 DPQGLVILLSDEAGIG-DQERSRADALLARGALVAPVDLG-AYLA-ALGADDNEC--VY-------LISDFEALSREAQR 113 (456)
T ss_pred CcceeeEEEEcccChh-hhhcchhHHHhhcCCeeeccccc-hhhh-ccccCCCcc--eE-------EehhHHHHhHHHHH
Confidence 3456677777434432 22345788898999999999983 3211 011111110 00 11333333333332
Q ss_pred ----cCCCeEEEEEecccHHHHHHhhcCC---CccEEEEecCC
Q 025842 121 ----KGVSAIGAAGFCWGGVVAAKLASSH---DIQAAVVLHPG 156 (247)
Q Consensus 121 ----~~~~~i~l~G~S~Gg~~a~~~a~~~---~i~~~v~~~~~ 156 (247)
..+---++.|--.||.+++..+++. .+.+.+...+.
T Consensus 114 ~a~~g~yr~PVl~g~g~Gg~~A~asaaqSp~atlag~Vsldp~ 156 (456)
T COG3946 114 AADLGVYRLPVLTGPGQGGTLAYASAAQSPDATLAGAVSLDPT 156 (456)
T ss_pred HhhccCcccceEeecCCCcHHHHHHHhhChhhhhcCccCCCCC
Confidence 2344556778999999999877554 55555554443
No 336
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=32.56 E-value=82 Score=26.04 Aligned_cols=37 Identities=19% Similarity=0.274 Sum_probs=26.9
Q ss_pred CeEEEEEcC-ccC----CCcchHHHHHHHHHhcCcEEEEecc
Q 025842 43 KSAILLISD-VFG----YEAPLFRKLADKVAGAGFLVVAPDF 79 (247)
Q Consensus 43 ~~~vv~~hg-g~g----~~~~~~~~~a~~la~~G~~v~~~d~ 79 (247)
++-|++.|| ..+ +..+.|..+++.|.++|+.|+.+-.
T Consensus 175 ~~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~~~Vvl~g~ 216 (334)
T COG0859 175 RPYIVINPGASRGSAKRWPLEHYAELAELLIAKGYQVVLFGG 216 (334)
T ss_pred CCeEEEeccccccccCCCCHHHHHHHHHHHHHCCCEEEEecC
Confidence 356677775 333 3455788999999999988888765
No 337
>PHA01735 hypothetical protein
Probab=32.26 E-value=40 Score=20.58 Aligned_cols=28 Identities=18% Similarity=0.323 Sum_probs=20.6
Q ss_pred CCccccchHHHHHHHHHhcCCCeEEEEE
Q 025842 103 NTDKGYVDAKSVIAALKSKGVSAIGAAG 130 (247)
Q Consensus 103 ~~~~~~~d~~~~i~~l~~~~~~~i~l~G 130 (247)
+-+....|+.++++||+.++..-+..-|
T Consensus 27 sgeATtaDL~AA~d~Lk~NdItgv~~~g 54 (76)
T PHA01735 27 SGEATTADLRAACDWLKSNDITGVAVDG 54 (76)
T ss_pred cCcccHHHHHHHHHHHHHCCCceeeCCC
Confidence 3355668999999999999765555444
No 338
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=32.26 E-value=54 Score=28.11 Aligned_cols=31 Identities=29% Similarity=0.288 Sum_probs=24.4
Q ss_pred HHHHHHHhcCCCeEEEEEecccHHHHHHhhc
Q 025842 113 SVIAALKSKGVSAIGAAGFCWGGVVAAKLAS 143 (247)
Q Consensus 113 ~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~ 143 (247)
-+++.+.+.+..+=.+.|.|.|+.++..++.
T Consensus 84 GVlkaL~e~gllp~iI~GtSAGAivaalla~ 114 (407)
T cd07232 84 GVVKALLDADLLPNVISGTSGGSLVAALLCT 114 (407)
T ss_pred HHHHHHHhCCCCCCEEEEECHHHHHHHHHHc
Confidence 5566777766556679999999999998875
No 339
>PF09989 DUF2229: CoA enzyme activase uncharacterised domain (DUF2229); InterPro: IPR018709 Proteins containing this domain include various bacterial hypothetical proteins, as well as CoA enzyme activases. The exact function of this domain has not, as yet, been defined.
Probab=32.19 E-value=57 Score=25.27 Aligned_cols=37 Identities=24% Similarity=0.420 Sum_probs=26.9
Q ss_pred CeEEEEEcCccCC-CcchHHHHHHHHHhcCcEEEEecc
Q 025842 43 KSAILLISDVFGY-EAPLFRKLADKVAGAGFLVVAPDF 79 (247)
Q Consensus 43 ~~~vv~~hgg~g~-~~~~~~~~a~~la~~G~~v~~~d~ 79 (247)
.+.|+++.+-+-. +......+.+.|++.|+.|+..|+
T Consensus 183 ~~~Ivl~GrpY~~~D~~in~~I~~~l~~~G~~vit~d~ 220 (221)
T PF09989_consen 183 KPAIVLLGRPYNIYDPFINMGIPDKLRSLGVPVITEDM 220 (221)
T ss_pred CceEEEEcCCCcCCCcccCCchHHHHHHCCCeeeCccc
Confidence 4567666656654 333445788999999999999986
No 340
>PRK07053 glutamine amidotransferase; Provisional
Probab=31.95 E-value=2.1e+02 Score=22.31 Aligned_cols=32 Identities=22% Similarity=0.390 Sum_probs=19.9
Q ss_pred HHHHHHHHHhcCCCeEEEEEecccHHHHHHhh
Q 025842 111 AKSVIAALKSKGVSAIGAAGFCWGGVVAAKLA 142 (247)
Q Consensus 111 ~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a 142 (247)
+...++++++.-...+=++|.|+|..+...+.
T Consensus 69 ~~~~~~~i~~~~~~~~PvlGIC~G~Qlla~al 100 (234)
T PRK07053 69 LAPEIALLRQRLAAGLPTLGICLGAQLIARAL 100 (234)
T ss_pred HHHHHHHHHHHHHCCCCEEEECccHHHHHHHc
Confidence 33444444433122345889999999988765
No 341
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B.
Probab=31.89 E-value=1.6e+02 Score=21.96 Aligned_cols=53 Identities=13% Similarity=0.045 Sum_probs=27.0
Q ss_pred hHHHHHHHHHhcCcEEEEeccCCCCCccCCCCcccchHHHHhhcCCccccchHHHHHHHHHhc-CCCeEEEEE
Q 025842 59 LFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSK-GVSAIGAAG 130 (247)
Q Consensus 59 ~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~-~~~~i~l~G 130 (247)
.-..+++.+++.--.++++|.- +. .+.+...+.+..+++.+++. +..+|.++-
T Consensus 47 le~~~a~~ia~~~a~~~~ld~~-------~N------------~~~~~~~~~~~~fv~~iR~~hP~tPIllv~ 100 (178)
T PF14606_consen 47 LEPEVADLIAEIDADLIVLDCG-------PN------------MSPEEFRERLDGFVKTIREAHPDTPILLVS 100 (178)
T ss_dssp --HHHHHHHHHS--SEEEEEES-------HH------------CCTTTHHHHHHHHHHHHHTT-SSS-EEEEE
T ss_pred cCHHHHHHHhcCCCCEEEEEee-------cC------------CCHHHHHHHHHHHHHHHHHhCCCCCEEEEe
Confidence 3345666666665566777762 00 12233335677777777765 344666554
No 342
>cd08194 Fe-ADH6 Iron-containing alcohol dehydrogenases-like. Iron-containing alcohol dehydrogenase-like. Proteins of this family have not been characterized. Their specific function is unknown. The protein structure represents a dehydroquinate synthase-like fold and belongs to the alcohol dehydrogenase-like superfamily. They are distinct from other alcohol dehydrogenases which contain different protein domains. Alcohol dehydrogenase catalyzes the reduction of acetaldehyde to alcohol with NADP as cofactor. Its activity requires iron ions.
Probab=31.66 E-value=2.7e+02 Score=23.50 Aligned_cols=64 Identities=22% Similarity=0.218 Sum_probs=39.3
Q ss_pred EEEEEcCccCCCcchHHHHHHHHHhcCcEEEEeccCCCCCccCCCCcccchHHHHhhcCCccccchHHHHHHHHHhcCCC
Q 025842 45 AILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSKGVS 124 (247)
Q Consensus 45 ~vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~ 124 (247)
.++++.+..-.....+..+...|.+.|..+..++-..+.+. .+.+.++++.+++.+.+
T Consensus 25 r~livt~~~~~~~g~~~~v~~~L~~~gi~~~~~~~v~~~p~----------------------~~~v~~~~~~~~~~~~D 82 (375)
T cd08194 25 RPLIVTDKVMVKLGLVDKLTDSLKKEGIESAIFDDVVSEPT----------------------DESVEEGVKLAKEGGCD 82 (375)
T ss_pred eEEEEcCcchhhcchHHHHHHHHHHCCCeEEEECCCCCCcC----------------------HHHHHHHHHHHHhcCCC
Confidence 35555543222223556788888888988877764222211 16677888888887777
Q ss_pred eEEEEE
Q 025842 125 AIGAAG 130 (247)
Q Consensus 125 ~i~l~G 130 (247)
-|+-+|
T Consensus 83 ~IIaiG 88 (375)
T cd08194 83 VIIALG 88 (375)
T ss_pred EEEEeC
Confidence 666554
No 343
>PRK13230 nitrogenase reductase-like protein; Reviewed
Probab=31.56 E-value=39 Score=26.98 Aligned_cols=22 Identities=18% Similarity=0.092 Sum_probs=19.0
Q ss_pred hHHHHHHHHHhcCcEEEEeccC
Q 025842 59 LFRKLADKVAGAGFLVVAPDFF 80 (247)
Q Consensus 59 ~~~~~a~~la~~G~~v~~~d~~ 80 (247)
.-..+|..|+.+|+.|+++|.=
T Consensus 17 ~a~nLA~~La~~G~rVLliD~D 38 (279)
T PRK13230 17 TVCNIAAALAESGKKVLVVGCD 38 (279)
T ss_pred HHHHHHHHHHhCCCEEEEEeeC
Confidence 3467899999999999999984
No 344
>COG1564 THI80 Thiamine pyrophosphokinase [Coenzyme metabolism]
Probab=31.37 E-value=1.2e+02 Score=23.36 Aligned_cols=33 Identities=21% Similarity=0.344 Sum_probs=28.4
Q ss_pred ccccchHHHHHHHHHhcCCCeEEEEEecccHHHH
Q 025842 105 DKGYVDAKSVIAALKSKGVSAIGAAGFCWGGVVA 138 (247)
Q Consensus 105 ~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a 138 (247)
++...|..-+++++.+++.+.|.++| -+||.+=
T Consensus 74 eKd~TD~elAl~~a~e~g~d~i~i~G-a~GGR~D 106 (212)
T COG1564 74 EKDSTDLELALDEALERGADEIVILG-ALGGRLD 106 (212)
T ss_pred hhccchHHHHHHHHHHcCCCEEEEEe-cCCChHH
Confidence 66778999999999999988999998 7888763
No 345
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=30.65 E-value=64 Score=27.47 Aligned_cols=32 Identities=25% Similarity=0.280 Sum_probs=25.1
Q ss_pred HHHHHHHhcCCCeEEEEEecccHHHHHHhhcC
Q 025842 113 SVIAALKSKGVSAIGAAGFCWGGVVAAKLASS 144 (247)
Q Consensus 113 ~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~ 144 (247)
-+++.|.+.+..+=.+.|-|.|+.+|..+|..
T Consensus 100 Gv~kaL~e~gl~p~~i~GtS~Gaivaa~~a~~ 131 (391)
T cd07229 100 GVVKALWLRGLLPRIITGTATGALIAALVGVH 131 (391)
T ss_pred HHHHHHHHcCCCCceEEEecHHHHHHHHHHcC
Confidence 55667777766666799999999999998753
No 346
>KOG0780 consensus Signal recognition particle, subunit Srp54 [Intracellular trafficking, secretion, and vesicular transport]
Probab=30.46 E-value=3.6e+02 Score=23.29 Aligned_cols=90 Identities=18% Similarity=0.145 Sum_probs=50.0
Q ss_pred HHHHhcCcEEEEeccCCCCCccCCCCcccchHHHHhhcCCccccchHHHHHHHHHhcCCCeEEEEEecccHHHHHHhhcC
Q 025842 65 DKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLASS 144 (247)
Q Consensus 65 ~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~ 144 (247)
+.+...+|.++.+|. .|... .. ..-..+.++..+...++.|+++=.+.=|..|...|..
T Consensus 177 ~~fKke~fdvIIvDT-SGRh~-------------qe-------~sLfeEM~~v~~ai~Pd~vi~VmDasiGQaae~Qa~a 235 (483)
T KOG0780|consen 177 DRFKKENFDVIIVDT-SGRHK-------------QE-------ASLFEEMKQVSKAIKPDEIIFVMDASIGQAAEAQARA 235 (483)
T ss_pred HHHHhcCCcEEEEeC-CCchh-------------hh-------HHHHHHHHHHHhhcCCCeEEEEEeccccHhHHHHHHH
Confidence 456667899999998 44422 00 0122233333333466777766666666666665532
Q ss_pred --C--CccEEEEe--cCCCC---CccccccccccEEEeec
Q 025842 145 --H--DIQAAVVL--HPGAI---TVDDINEIKVPVAILGA 175 (247)
Q Consensus 145 --~--~i~~~v~~--~~~~~---~~~~~~~~~~P~l~i~g 175 (247)
. .|.++|+. .+... ........+.|+.+|--
T Consensus 236 Fk~~vdvg~vIlTKlDGhakGGgAlSaVaaTksPIiFIGt 275 (483)
T KOG0780|consen 236 FKETVDVGAVILTKLDGHAKGGGALSAVAATKSPIIFIGT 275 (483)
T ss_pred HHHhhccceEEEEecccCCCCCceeeehhhhCCCEEEEec
Confidence 2 78888873 33322 23345556788877753
No 347
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=30.46 E-value=65 Score=25.50 Aligned_cols=32 Identities=22% Similarity=0.183 Sum_probs=22.2
Q ss_pred HHHHHHHhcCCC----eEEEEEecccHHHHHHhhcC
Q 025842 113 SVIAALKSKGVS----AIGAAGFCWGGVVAAKLASS 144 (247)
Q Consensus 113 ~~i~~l~~~~~~----~i~l~G~S~Gg~~a~~~a~~ 144 (247)
-+++.+.+.+.. .-.+.|-|.|+..+..++..
T Consensus 21 GVl~~L~e~g~~l~~~~~~i~G~SAGAl~aa~~a~g 56 (249)
T cd07220 21 GVASCLLEHAPFLVANARKIYGASAGALTATALVTG 56 (249)
T ss_pred HHHHHHHhcCCcccccCCeEEEEcHHHHHHHHHHcC
Confidence 455666665432 34578999999999987743
No 348
>cd02037 MRP-like MRP (Multiple Resistance and pH adaptation) is a homologue of the Fer4_NifH superfamily. Like the other members of the superfamily, MRP contains a ATP-binding domain at the N-termini. It is found in bacteria as a membrane-spanning protein and functions as a Na+/H+ antiporter.
Probab=30.10 E-value=58 Score=23.64 Aligned_cols=28 Identities=25% Similarity=0.151 Sum_probs=21.1
Q ss_pred CccCCCcchHHHHHHHHHhcCcEEEEecc
Q 025842 51 DVFGYEAPLFRKLADKVAGAGFLVVAPDF 79 (247)
Q Consensus 51 gg~g~~~~~~~~~a~~la~~G~~v~~~d~ 79 (247)
||-|.+ ..-..+|..++++|+.|+.+|.
T Consensus 9 gG~GKT-t~a~~LA~~la~~g~~vllvD~ 36 (169)
T cd02037 9 GGVGKS-TVAVNLALALAKLGYKVGLLDA 36 (169)
T ss_pred CcCChh-HHHHHHHHHHHHcCCcEEEEeC
Confidence 344443 3345788999999999999998
No 349
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=29.98 E-value=93 Score=22.71 Aligned_cols=46 Identities=20% Similarity=0.198 Sum_probs=24.9
Q ss_pred chHHHHHHHHHhcCCCeEEEEEecccHHHHHHhhcC-C-CccEEEEecC
Q 025842 109 VDAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLASS-H-DIQAAVVLHP 155 (247)
Q Consensus 109 ~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~-~-~i~~~v~~~~ 155 (247)
+++.+.++.++..+ .+|+++|-|..|.+-+.++.. . .|..++-.+|
T Consensus 55 ~~l~~~L~~~~~~g-k~I~~yGA~~kg~tlln~~g~~~~~I~~vvD~np 102 (160)
T PF08484_consen 55 AELREFLEKLKAEG-KRIAGYGAGAKGNTLLNYFGLDNDLIDYVVDDNP 102 (160)
T ss_dssp HHHHHHHHHHHHTT---EEEE---SHHHHHHHHHT--TTTS--EEES-G
T ss_pred HHHHHHHHHHHHcC-CEEEEECcchHHHHHHHHhCCCcceeEEEEeCCh
Confidence 44555555555544 789999999999988887643 4 5777776553
No 350
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=29.68 E-value=34 Score=27.06 Aligned_cols=15 Identities=27% Similarity=0.341 Sum_probs=12.9
Q ss_pred CCCeEEEEEecccHH
Q 025842 122 GVSAIGAAGFCWGGV 136 (247)
Q Consensus 122 ~~~~i~l~G~S~Gg~ 136 (247)
+...|.++|||+|..
T Consensus 233 ~i~~I~i~GhSl~~~ 247 (270)
T PF14253_consen 233 DIDEIIIYGHSLGEV 247 (270)
T ss_pred CCCEEEEEeCCCchh
Confidence 457999999999975
No 351
>TIGR01281 DPOR_bchL light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein. The BchL peptide (ChlL in chloroplast and cyanobacteria) is an ATP-binding iron-sulfur protein of the dark form protochlorophyllide reductase, an enzyme similar to nitrogenase. This subunit resembles the nitrogenase NifH subunit.
Probab=29.65 E-value=44 Score=26.44 Aligned_cols=21 Identities=19% Similarity=-0.028 Sum_probs=18.4
Q ss_pred HHHHHHHHHhcCcEEEEeccC
Q 025842 60 FRKLADKVAGAGFLVVAPDFF 80 (247)
Q Consensus 60 ~~~~a~~la~~G~~v~~~d~~ 80 (247)
-..+|..||++|+.|+++|.=
T Consensus 17 ~~nLA~~La~~g~rVLliD~D 37 (268)
T TIGR01281 17 SSNLSVAFAKLGKRVLQIGCD 37 (268)
T ss_pred HHHHHHHHHhCCCeEEEEecC
Confidence 457889999999999999984
No 352
>PRK03094 hypothetical protein; Provisional
Probab=29.63 E-value=67 Score=20.43 Aligned_cols=22 Identities=14% Similarity=0.187 Sum_probs=17.8
Q ss_pred chHHHHHHHHHhcCcEEEEecc
Q 025842 58 PLFRKLADKVAGAGFLVVAPDF 79 (247)
Q Consensus 58 ~~~~~~a~~la~~G~~v~~~d~ 79 (247)
..+..+.+.|.++||.|+-+..
T Consensus 8 ~~Ls~i~~~L~~~GYeVv~l~~ 29 (80)
T PRK03094 8 QSLTDVQQALKQKGYEVVQLRS 29 (80)
T ss_pred cCcHHHHHHHHHCCCEEEecCc
Confidence 3456788999999999997764
No 353
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=29.46 E-value=68 Score=26.46 Aligned_cols=31 Identities=26% Similarity=0.294 Sum_probs=23.5
Q ss_pred HHHHHHHhcCCCeEEEEEecccHHHHHHhhc
Q 025842 113 SVIAALKSKGVSAIGAAGFCWGGVVAAKLAS 143 (247)
Q Consensus 113 ~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~ 143 (247)
-+++.+.+.+..+-.+.|-|.|+.++..++.
T Consensus 85 GVlkaL~e~gl~p~~i~GsSaGAivaa~~~~ 115 (323)
T cd07231 85 GVVRTLVEHQLLPRVIAGSSVGSIVCAIIAT 115 (323)
T ss_pred HHHHHHHHcCCCCCEEEEECHHHHHHHHHHc
Confidence 4566666666555579999999999988764
No 354
>PF13207 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6_G 2QT1_A 2QSZ_A 2QSY_A 2QT0_A 2QG6_A 2P0E_A ....
Probab=29.40 E-value=86 Score=20.96 Aligned_cols=31 Identities=32% Similarity=0.435 Sum_probs=22.2
Q ss_pred EEEEcCccCCCcchHHHHHHHHHhc-CcEEEEecc
Q 025842 46 ILLISDVFGYEAPLFRKLADKVAGA-GFLVVAPDF 79 (247)
Q Consensus 46 vv~~hgg~g~~~~~~~~~a~~la~~-G~~v~~~d~ 79 (247)
||++.|-.|... .-+++.|+++ |+.++..|-
T Consensus 1 vI~I~G~~gsGK---ST~a~~La~~~~~~~i~~d~ 32 (121)
T PF13207_consen 1 VIIISGPPGSGK---STLAKELAERLGFPVISMDD 32 (121)
T ss_dssp EEEEEESTTSSH---HHHHHHHHHHHTCEEEEEHH
T ss_pred CEEEECCCCCCH---HHHHHHHHHHHCCeEEEecc
Confidence 567775555432 3577888886 999999887
No 355
>PF08250 Sperm_act_pep: Sperm-activating peptides; InterPro: IPR013254 The sperm-activating peptides (SAPs) are isolated in egg-conditioned media (egg jelly) of sea urchins. SAPs have several effects on sea urchin spermatozoa: stimulate sperm respiration and motility through intracellular alkalinization, transient elevation of cAMP, cGMP and Ca2+ levels in sperm cells [, ].
Probab=29.22 E-value=14 Score=13.38 Aligned_cols=6 Identities=67% Similarity=1.453 Sum_probs=2.5
Q ss_pred EecccH
Q 025842 130 GFCWGG 135 (247)
Q Consensus 130 G~S~Gg 135 (247)
|+++||
T Consensus 1 gf~l~G 6 (10)
T PF08250_consen 1 GFSLGG 6 (10)
T ss_pred Cccccc
Confidence 344443
No 356
>COG0084 TatD Mg-dependent DNase [DNA replication, recombination, and repair]
Probab=28.81 E-value=1.7e+02 Score=23.27 Aligned_cols=51 Identities=29% Similarity=0.255 Sum_probs=43.0
Q ss_pred ccchHHHHHHHHHhcCCCeEEEEEecccHHH-HHHhhcCC-CccEEEEecCCC
Q 025842 107 GYVDAKSVIAALKSKGVSAIGAAGFCWGGVV-AAKLASSH-DIQAAVVLHPGA 157 (247)
Q Consensus 107 ~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~-a~~~a~~~-~i~~~v~~~~~~ 157 (247)
...|..++++..++.+..++.++|.+....- ++.+|..+ .+-+.+.++|..
T Consensus 15 ~~~d~~~vi~~a~~~gv~~~~~~g~~~~~~~~~~~la~~y~~v~~~~G~HP~~ 67 (256)
T COG0084 15 FDEDRDEVIARAREAGVKKMVVVGTDLEDFKRALELAEKYPNVYAAVGVHPLD 67 (256)
T ss_pred hcCCHHHHHHHHHHcCCcEEEEeecCHHHHHHHHHHHHhCCCeEEEEeeCCCc
Confidence 3467888999888888899999999999888 66677665 799999999987
No 357
>TIGR01287 nifH nitrogenase iron protein. This model describes nitrogenase (EC 1.18.6.1) iron protein, also called nitrogenase reductase or nitrogenase component II. This model includes molybdenum-iron nitrogenase reductase (nifH), vanadium-iron nitrogenase reductase (vnfH), and iron-iron nitrogenase reductase (anfH). The model excludes the homologous protein from the light-independent protochlorophyllide reductase.
Probab=28.80 E-value=49 Score=26.35 Aligned_cols=21 Identities=19% Similarity=0.093 Sum_probs=18.5
Q ss_pred HHHHHHHHHhcCcEEEEeccC
Q 025842 60 FRKLADKVAGAGFLVVAPDFF 80 (247)
Q Consensus 60 ~~~~a~~la~~G~~v~~~d~~ 80 (247)
-..+|..|+.+|+.|+++|.=
T Consensus 17 a~nLA~~La~~G~~VlliD~D 37 (275)
T TIGR01287 17 TQNIAAALAEMGKKVMIVGCD 37 (275)
T ss_pred HHHHHHHHHHCCCeEEEEeCC
Confidence 457899999999999999984
No 358
>cd03129 GAT1_Peptidase_E_like Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E and, extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Peptidase E and cyanophycinases are thought to have a Ser-His-Glu catalytic triad which differs from
Probab=28.63 E-value=2.6e+02 Score=21.16 Aligned_cols=38 Identities=16% Similarity=0.119 Sum_probs=24.6
Q ss_pred CCeEEEEEcCccCCCcchHHHHHHHHHhcCcEEEEecc
Q 025842 42 SKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDF 79 (247)
Q Consensus 42 ~~~~vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~ 79 (247)
..+.|+++.-..+........+.+.+.+.|+.+..+..
T Consensus 28 ~~~~i~~iptA~~~~~~~~~~~~~~~~~lG~~~~~~~~ 65 (210)
T cd03129 28 AGARVLFIPTASGDRDEYGEEYRAAFERLGVEVVHLLL 65 (210)
T ss_pred CCCeEEEEeCCCCChHHHHHHHHHHHHHcCCceEEEec
Confidence 45678888744443333445666777778988887665
No 359
>PRK13185 chlL protochlorophyllide reductase iron-sulfur ATP-binding protein; Provisional
Probab=28.61 E-value=48 Score=26.26 Aligned_cols=29 Identities=17% Similarity=0.027 Sum_probs=21.7
Q ss_pred CccCCCcchHHHHHHHHHhcCcEEEEeccC
Q 025842 51 DVFGYEAPLFRKLADKVAGAGFLVVAPDFF 80 (247)
Q Consensus 51 gg~g~~~~~~~~~a~~la~~G~~v~~~d~~ 80 (247)
||-|.+ ..-..+|..|+.+|+.|+++|.-
T Consensus 11 GGVGKT-T~~~nLA~~la~~G~kVLliD~D 39 (270)
T PRK13185 11 GGIGKS-TTSSNLSAAFAKLGKKVLQIGCD 39 (270)
T ss_pred CCCCHH-HHHHHHHHHHHHCCCeEEEEecc
Confidence 444432 23467899999999999999984
No 360
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=28.60 E-value=2.8e+02 Score=23.60 Aligned_cols=99 Identities=12% Similarity=-0.009 Sum_probs=54.0
Q ss_pred EecccHHHHHHhhcCC----CccEEEEecCCCCCc-cc-c--ccccccEEEeecCCCCCCCHHHHHHHHHHHHhccCCCe
Q 025842 130 GFCWGGVVAAKLASSH----DIQAAVVLHPGAITV-DD-I--NEIKVPVAILGAEIDHVSPPEDLKRFGEILSAKLKNDC 201 (247)
Q Consensus 130 G~S~Gg~~a~~~a~~~----~i~~~v~~~~~~~~~-~~-~--~~~~~P~l~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~ 201 (247)
-.|.||.-|+.++.+. ..++-|-++-..... .. + ..+++-+.=.+-.+...+..+......+.+ + ..
T Consensus 98 ~Qt~GGTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~~If~~aGl~v~~Y~Yyd~~~~~~df~~mla~L~~a---~--~~ 172 (396)
T COG1448 98 VQTLGGTGALRVAADFLARFFPDATVWISDPTWPNHKAIFEAAGLEVETYPYYDAETKGLDFDGMLADLKTA---P--EG 172 (396)
T ss_pred eecCCcchHHHHHHHHHHHhCCCceEEeCCCCcHhHHHHHHhcCCceeeeeccccccccccHHHHHHHHHhC---C--CC
Confidence 4589999999987543 444445444222111 11 1 123333444444444445544444444443 2 44
Q ss_pred eEEEeCCCCccccccCCCCChHHHHHHHHHHHHHHHHHHHH
Q 025842 202 LVKIYPRVSHGWTVRYNVEDEFAVKSAEEAHEDMINWLTKY 242 (247)
Q Consensus 202 ~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~ 242 (247)
.++++.++-|.-..-.. ..+.|..+++++++.
T Consensus 173 ~vvLLH~CcHNPTG~D~---------t~~qW~~l~~~~~~r 204 (396)
T COG1448 173 SVVLLHGCCHNPTGIDP---------TEEQWQELADLIKER 204 (396)
T ss_pred CEEEEecCCCCCCCCCC---------CHHHHHHHHHHHHHc
Confidence 57777778887544322 367888888888753
No 361
>PLN02840 tRNA dimethylallyltransferase
Probab=28.37 E-value=3.9e+02 Score=23.18 Aligned_cols=86 Identities=19% Similarity=0.165 Sum_probs=42.5
Q ss_pred CCeEEEEEcCccCCCcchHHHHHHHHHhc-CcEEEEeccC---CCCCc--cCCCCcc--------cchHHHHhhcCCccc
Q 025842 42 SKSAILLISDVFGYEAPLFRKLADKVAGA-GFLVVAPDFF---YGDPI--VDLNNPQ--------FDREAWRKIHNTDKG 107 (247)
Q Consensus 42 ~~~~vv~~hgg~g~~~~~~~~~a~~la~~-G~~v~~~d~~---~g~~~--~~~~~~~--------~~~~~~~~~~~~~~~ 107 (247)
.+..+|++-|..|... ..++..|+.+ +..++..|.. .+..- ..|...+ .++-.....++....
T Consensus 19 ~~~~vi~I~GptgsGK---Ttla~~La~~~~~~iis~Ds~qvYr~~~IgTaKpt~eE~~~V~Hhlidil~p~e~ySv~~F 95 (421)
T PLN02840 19 KKEKVIVISGPTGAGK---SRLALELAKRLNGEIISADSVQVYRGLDVGSAKPSLSERKEVPHHLIDILHPSDDYSVGAF 95 (421)
T ss_pred cCCeEEEEECCCCCCH---HHHHHHHHHHCCCCeEeccccceecceeEEcCCCCHHHHcCCCeEeEeecCCCCceeHHHH
Confidence 3455777776655432 2455566654 5567777753 12110 0111100 000011112233444
Q ss_pred cchHHHHHHHHHhcCCCeEEEEE
Q 025842 108 YVDAKSVIAALKSKGVSAIGAAG 130 (247)
Q Consensus 108 ~~d~~~~i~~l~~~~~~~i~l~G 130 (247)
..++..+++.+...+.-+|.+.|
T Consensus 96 ~~~A~~~I~~i~~rgkiPIvVGG 118 (421)
T PLN02840 96 FDDARRATQDILNRGRVPIVAGG 118 (421)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcC
Confidence 57888888888877755665554
No 362
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=28.32 E-value=62 Score=23.45 Aligned_cols=31 Identities=32% Similarity=0.243 Sum_probs=20.1
Q ss_pred HHHHH-HhcCCCeEEEEEecccHHHHHHhhcC
Q 025842 114 VIAAL-KSKGVSAIGAAGFCWGGVVAAKLASS 144 (247)
Q Consensus 114 ~i~~l-~~~~~~~i~l~G~S~Gg~~a~~~a~~ 144 (247)
+++.| ......--.+.|-|.||.+++.++..
T Consensus 16 ~l~~L~~~~~~~~d~i~GtS~Gal~a~~~~~~ 47 (204)
T PF01734_consen 16 VLKALGQGLGERFDVISGTSAGALNAALLALG 47 (204)
T ss_dssp HHHHHCCTGCCT-SEEEEECCHHHHHHHHHTC
T ss_pred HHHHHhhhhCCCccEEEEcChhhhhHHHHHhC
Confidence 34445 23334455688999999999887743
No 363
>cd08189 Fe-ADH5 Iron-containing alcohol dehydrogenases-like. Iron-containing alcohol dehydrogenase-like. Alcohol dehydrogenase catalyzes the reduction of acetaldehyde to alcohol with NADP as cofactor. Its activity requires iron ions. The protein structure represents a dehydroquinate synthase-like fold and belongs to the alcohol dehydrogenase-like superfamily. They are distinct from other alcohol dehydrogenases which contains different protein domain. Proteins of this family have not been characterized. Their specific function is unknown.
Probab=28.28 E-value=3.2e+02 Score=23.03 Aligned_cols=64 Identities=25% Similarity=0.311 Sum_probs=38.0
Q ss_pred EEEEEcCccCCCcchHHHHHHHHHhcCcEEEEeccCCCCCccCCCCcccchHHHHhhcCCccccchHHHHHHHHHhcCCC
Q 025842 45 AILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSKGVS 124 (247)
Q Consensus 45 ~vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~ 124 (247)
.++++.+..-.....+..+.+.|.+.|..+..++-....+. .+.+..+++.+++.+.+
T Consensus 28 ~~lvvt~~~~~~~g~~~~v~~~L~~~g~~~~~~~~v~~~p~----------------------~~~v~~~~~~~~~~~~d 85 (374)
T cd08189 28 KVLIVTDKGLVKLGLLDKVLEALEGAGIEYAVYDGVPPDPT----------------------IENVEAGLALYRENGCD 85 (374)
T ss_pred eEEEEeCcchhhcccHHHHHHHHHhcCCeEEEeCCCCCCcC----------------------HHHHHHHHHHHHhcCCC
Confidence 45555533222223456677888888888777764211111 15677888888887766
Q ss_pred eEEEEE
Q 025842 125 AIGAAG 130 (247)
Q Consensus 125 ~i~l~G 130 (247)
-|+.+|
T Consensus 86 ~IIaiG 91 (374)
T cd08189 86 AILAVG 91 (374)
T ss_pred EEEEeC
Confidence 666444
No 364
>cd03416 CbiX_SirB_N Sirohydrochlorin cobalt chelatase (CbiX) and sirohydrochlorin iron chelatase (SirB), N-terminal domain. SirB catalyzes the ferro-chelation of sirohydrochlorin to siroheme, the prosthetic group of sulfite and nitrite reductases. CbiX is a cobaltochelatase, responsible for the chelation of Co2+ into sirohydrochlorin, an important step in the vitamin B12 biosynthetic pathway. CbiX often contains a C-terminal histidine-rich region that may be important for metal delivery and/or storage, and may also contain an iron-sulfur center. Both are found in a wide range of bacteria. This subgroup also contains single domain proteins from archaea and bacteria which may represent the ancestral form of class II chelatases before domain duplication occurred.
Probab=28.26 E-value=1.7e+02 Score=18.95 Aligned_cols=12 Identities=17% Similarity=0.346 Sum_probs=7.5
Q ss_pred hHHHHHHHHHhc
Q 025842 59 LFRKLADKVAGA 70 (247)
Q Consensus 59 ~~~~~a~~la~~ 70 (247)
.+..+++.+.++
T Consensus 17 ~~~~l~~~l~~~ 28 (101)
T cd03416 17 ALEALAERLRER 28 (101)
T ss_pred HHHHHHHHHHhh
Confidence 455677777654
No 365
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=28.09 E-value=74 Score=25.96 Aligned_cols=31 Identities=29% Similarity=0.307 Sum_probs=22.5
Q ss_pred HHHHHHHhcCCCeEEEEEecccHHHHHHhhc
Q 025842 113 SVIAALKSKGVSAIGAAGFCWGGVVAAKLAS 143 (247)
Q Consensus 113 ~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~ 143 (247)
-+++.+.+.+..+-.+.|.|.|+.++..++.
T Consensus 86 Gvl~aL~e~~l~~~~i~GtSaGAi~aa~~~~ 116 (298)
T cd07206 86 GVVKALWEQDLLPRVISGSSAGAIVAALLGT 116 (298)
T ss_pred HHHHHHHHcCCCCCEEEEEcHHHHHHHHHHc
Confidence 4455555555445569999999999998773
No 366
>cd08551 Fe-ADH iron-containing alcohol dehydrogenases (Fe-ADH)-like. Large metal-containing alcohol dehydrogenases (ADH), known as iron-containing alcohol dehydrogenases. They contain a dehydroquinate synthase-like protein structural fold and mostly contain iron. They are distinct from other alcohol dehydrogenases which contains different protein domains. There are several distinct families of alcohol dehydrogenases: Zinc-containing long-chain alcohol dehydrogenases; insect-type, or short-chain alcohol dehydrogenases; iron-containing alcohol dehydrogenases, and others. The iron-containing family has a Rossmann fold-like topology that resembles the fold of the zinc-dependent alcohol dehydrogenases, but lacks sequence homology, and differs in strand arrangement. ADH catalyzes the reversible oxidation of alcohol to acetaldehyde with the simultaneous reduction of NAD(P)+ to NAD(P)H.
Probab=28.03 E-value=3.3e+02 Score=22.81 Aligned_cols=64 Identities=23% Similarity=0.313 Sum_probs=37.7
Q ss_pred EEEEEcCccCCCcchHHHHHHHHHhcCcEEEEeccCCCCCccCCCCcccchHHHHhhcCCccccchHHHHHHHHHhcCCC
Q 025842 45 AILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSKGVS 124 (247)
Q Consensus 45 ~vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~ 124 (247)
.++++.+..-........+.+.|.++|+.+..++-..+.+. .+++..+++.+++.+.+
T Consensus 25 ~~lvv~~~~~~~~~~~~~v~~~L~~~~~~~~~~~~~~~~p~----------------------~~~v~~~~~~~~~~~~d 82 (370)
T cd08551 25 KALIVTDPGLVKTGVLDKVIDSLKEAGIEVVIFDGVEPNPT----------------------LSNVDAAVAAYREEGCD 82 (370)
T ss_pred eEEEEeCcchhhCccHHHHHHHHHHcCCeEEEECCCCCCCC----------------------HHHHHHHHHHHHhcCCC
Confidence 34455433222224455677888888888776653212211 16677888888877666
Q ss_pred eEEEEE
Q 025842 125 AIGAAG 130 (247)
Q Consensus 125 ~i~l~G 130 (247)
-|+.+|
T Consensus 83 ~IiaiG 88 (370)
T cd08551 83 GVIAVG 88 (370)
T ss_pred EEEEeC
Confidence 666444
No 367
>TIGR03371 cellulose_yhjQ cellulose synthase operon protein YhjQ. Members of this family are the YhjQ protein, found immediately upsteam of bacterial cellulose synthase (bcs) genes in a broad range of bacteria, including both copies of the bcs locus in Klebsiella pneumoniae. In several species it is seen clearly as part of the bcs operon. It is identified as a probable component of the bacterial cellulose metabolic process not only by gene location, but also by partial phylogenetic profiling, or Haft-Selengut algorithm (PubMed:16930487), based on a bacterial cellulose biosynthesis genome property profile. Cellulose plays an important role in biofilm formation and structural integrity in some bacteria. Mutants in yhjQ in Escherichia coli, show altered morphology an growth, but the function of YhjQ has not yet been determined.
Probab=27.95 E-value=75 Score=24.58 Aligned_cols=29 Identities=28% Similarity=0.155 Sum_probs=21.6
Q ss_pred CccCCCcchHHHHHHHHHhcCcEEEEeccC
Q 025842 51 DVFGYEAPLFRKLADKVAGAGFLVVAPDFF 80 (247)
Q Consensus 51 gg~g~~~~~~~~~a~~la~~G~~v~~~d~~ 80 (247)
||-|.+ ..-..+|..|+.+|+.|+.+|.=
T Consensus 11 GGvGKT-t~a~nla~~la~~g~~VlliD~D 39 (246)
T TIGR03371 11 GGVGKT-TLTANLASALKLLGEPVLAIDLD 39 (246)
T ss_pred CCccHH-HHHHHHHHHHHhCCCcEEEEeCC
Confidence 444533 33457889999999999999983
No 368
>cd02032 Bchl_like This family of proteins contains bchL and chlL. Protochlorophyllide reductase catalyzes the reductive formation of chlorophyllide from protochlorophyllide during biosynthesis of chlorophylls and bacteriochlorophylls. Three genes, bchL, bchN and bchB, are involved in light-independent protochlorophyllide reduction in bacteriochlorophyll biosynthesis. In cyanobacteria, algae, and gymnosperms, three similar genes, chlL, chlN and chlB are involved in protochlorophyllide reduction during chlorophylls biosynthesis. BchL/chlL, bchN/chlN and bchB/chlB exhibit significant sequence similarity to the nifH, nifD and nifK subunits of nitrogenase, respectively. Nitrogenase catalyzes the reductive formation of ammonia from dinitrogen.
Probab=27.82 E-value=49 Score=26.20 Aligned_cols=21 Identities=19% Similarity=0.010 Sum_probs=18.5
Q ss_pred HHHHHHHHHhcCcEEEEeccC
Q 025842 60 FRKLADKVAGAGFLVVAPDFF 80 (247)
Q Consensus 60 ~~~~a~~la~~G~~v~~~d~~ 80 (247)
-..+|..||.+|+.|+++|.=
T Consensus 17 a~nLA~~la~~G~rvlliD~D 37 (267)
T cd02032 17 SSNLSVALAKRGKKVLQIGCD 37 (267)
T ss_pred HHHHHHHHHHCCCcEEEEecC
Confidence 457899999999999999984
No 369
>PF13200 DUF4015: Putative glycosyl hydrolase domain
Probab=27.75 E-value=2.1e+02 Score=23.70 Aligned_cols=71 Identities=21% Similarity=0.210 Sum_probs=41.8
Q ss_pred EEEcCccCCCcchHHHHHHHHHhcCcEEEEeccC--CCCCccCCCCcccchHHHHhhcCCccccchHHHHHHHHHhcC
Q 025842 47 LLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF--YGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSKG 122 (247)
Q Consensus 47 v~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~ 122 (247)
|++.+....+...+..+.+.+.+.+...+++|.- +|.-....... .-.........+.|+.++++.+++.+
T Consensus 2 iYlt~~~a~~~~~~~~~~~~i~~t~lNavVIDvKdd~G~i~y~s~~~-----~~~~~ga~~~~i~D~~~l~~~l~e~g 74 (316)
T PF13200_consen 2 IYLTAYSAGSPERLDKLLDLIKRTELNAVVIDVKDDDGNITYDSQVP-----LAREIGAVKPYIKDLKALVKKLKEHG 74 (316)
T ss_pred EEechhhcCCHHHHHHHHHHHHhcCCceEEEEEecCCceEEecCCCc-----hhhhcccccccccCHHHHHHHHHHCC
Confidence 3444333333356778888888889999999996 44321001110 00111122233589999999999885
No 370
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=27.65 E-value=47 Score=22.97 Aligned_cols=32 Identities=19% Similarity=0.066 Sum_probs=20.0
Q ss_pred EEEcCccCCCcchHHHHHHHHHhcCcEEEEec
Q 025842 47 LLISDVFGYEAPLFRKLADKVAGAGFLVVAPD 78 (247)
Q Consensus 47 v~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d 78 (247)
++..+|.+++-.-+..+++.|.++|..|...-
T Consensus 2 li~~~Gt~Ghv~P~lala~~L~~rGh~V~~~~ 33 (139)
T PF03033_consen 2 LIATGGTRGHVYPFLALARALRRRGHEVRLAT 33 (139)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHTT-EEEEEE
T ss_pred EEEEcCChhHHHHHHHHHHHHhccCCeEEEee
Confidence 44443444444445678899999999986544
No 371
>PRK09072 short chain dehydrogenase; Provisional
Probab=27.53 E-value=1.1e+02 Score=23.89 Aligned_cols=31 Identities=23% Similarity=0.236 Sum_probs=22.7
Q ss_pred EEEEcCccCCCcchHHHHHHHHHhcCcEEEEecc
Q 025842 46 ILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDF 79 (247)
Q Consensus 46 vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~ 79 (247)
.+++.|+.+. .-..+++.|+++|+.|++.+.
T Consensus 7 ~vlItG~s~~---iG~~ia~~l~~~G~~V~~~~r 37 (263)
T PRK09072 7 RVLLTGASGG---IGQALAEALAAAGARLLLVGR 37 (263)
T ss_pred EEEEECCCch---HHHHHHHHHHHCCCEEEEEEC
Confidence 4666655442 336789999999999999875
No 372
>cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption.
Probab=27.50 E-value=2.8e+02 Score=21.14 Aligned_cols=39 Identities=10% Similarity=0.186 Sum_probs=26.2
Q ss_pred CCCeEEEEEcCccCCCcchHHHHHHHHHhc-CcEEEEecc
Q 025842 41 DSKSAILLISDVFGYEAPLFRKLADKVAGA-GFLVVAPDF 79 (247)
Q Consensus 41 ~~~~~vv~~hgg~g~~~~~~~~~a~~la~~-G~~v~~~d~ 79 (247)
++.+.|+|++-..+........+.+.|.+. |+.+...+.
T Consensus 29 ~~~~~i~~IptAs~~~~~~~~~~~~a~~~l~G~~~~~~~~ 68 (212)
T cd03146 29 KARPKVLFVPTASGDRDEYTARFYAAFESLRGVEVSHLHL 68 (212)
T ss_pred cCCCeEEEECCCCCCHHHHHHHHHHHHhhccCcEEEEEec
Confidence 355778888844343233445567788888 999888875
No 373
>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=27.46 E-value=1e+02 Score=25.40 Aligned_cols=33 Identities=30% Similarity=0.369 Sum_probs=24.6
Q ss_pred eEEEEEcCccCCCcchHHHHHHHHHhcCcEEEEecc
Q 025842 44 SAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDF 79 (247)
Q Consensus 44 ~~vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~ 79 (247)
.-.|++-| .++..-+.+|.+|.++||.|++--.
T Consensus 29 ~k~VlITG---CDSGfG~~LA~~L~~~Gf~V~Agcl 61 (322)
T KOG1610|consen 29 DKAVLITG---CDSGFGRLLAKKLDKKGFRVFAGCL 61 (322)
T ss_pred CcEEEEec---CCcHHHHHHHHHHHhcCCEEEEEee
Confidence 34677763 3334557899999999999999875
No 374
>PRK13235 nifH nitrogenase reductase; Reviewed
Probab=27.43 E-value=46 Score=26.49 Aligned_cols=21 Identities=14% Similarity=-0.005 Sum_probs=18.5
Q ss_pred HHHHHHHHHhcCcEEEEeccC
Q 025842 60 FRKLADKVAGAGFLVVAPDFF 80 (247)
Q Consensus 60 ~~~~a~~la~~G~~v~~~d~~ 80 (247)
-..++-.|+++|+.|+++|.=
T Consensus 18 ~~nLA~~La~~G~rVLlID~D 38 (274)
T PRK13235 18 TQNTVAGLAEMGKKVMVVGCD 38 (274)
T ss_pred HHHHHHHHHHCCCcEEEEecC
Confidence 457899999999999999984
No 375
>PRK13849 putative crown gall tumor protein VirC1; Provisional
Probab=27.28 E-value=83 Score=24.50 Aligned_cols=28 Identities=18% Similarity=0.063 Sum_probs=22.0
Q ss_pred CccCCCcchHHHHHHHHHhcCcEEEEecc
Q 025842 51 DVFGYEAPLFRKLADKVAGAGFLVVAPDF 79 (247)
Q Consensus 51 gg~g~~~~~~~~~a~~la~~G~~v~~~d~ 79 (247)
||.|.+ ..-..++..|+.+|+.|+++|.
T Consensus 11 GGvGKT-T~a~nLA~~la~~G~~VlliD~ 38 (231)
T PRK13849 11 GGAGKT-TALMGLCAALASDGKRVALFEA 38 (231)
T ss_pred CCccHH-HHHHHHHHHHHhCCCcEEEEeC
Confidence 555643 3446788999999999999999
No 376
>PRK10037 cell division protein; Provisional
Probab=27.19 E-value=51 Score=25.86 Aligned_cols=29 Identities=21% Similarity=0.045 Sum_probs=22.2
Q ss_pred CccCCCcchHHHHHHHHHhcCcEEEEeccC
Q 025842 51 DVFGYEAPLFRKLADKVAGAGFLVVAPDFF 80 (247)
Q Consensus 51 gg~g~~~~~~~~~a~~la~~G~~v~~~d~~ 80 (247)
||-|.+ ..-..++..|+.+|+.|+++|.-
T Consensus 11 GGvGKT-T~a~nLA~~La~~G~rVLlID~D 39 (250)
T PRK10037 11 GGVGTT-SITAALAWSLQMLGENVLVIDAC 39 (250)
T ss_pred CCccHH-HHHHHHHHHHHhcCCcEEEEeCC
Confidence 555543 33467889999999999999984
No 377
>cd02040 NifH NifH gene encodes component II (iron protein) of nitrogenase. Nitrogenase is responsible for the biological nitrogen fixation, i.e. reduction of molecular nitrogen to ammonia. NifH consists of two oxygen-sensitive metallosulfur proteins: the mollybdenum-iron (alternatively, vanadium-iron or iron-iron) protein (commonly referred to as component 1), and the iron protein (commonly referred to as component 2). The iron protein is a homodimer, with an Fe4S4 cluster bound between the subunits and two ATP-binding domains. It supplies energy by ATP hydrolysis, and transfers electrons from reduced ferredoxin or flavodoxin to component 1 for the reduction of molecular nitrogen to ammonia.
Probab=27.12 E-value=54 Score=25.86 Aligned_cols=29 Identities=17% Similarity=0.082 Sum_probs=21.8
Q ss_pred CccCCCcchHHHHHHHHHhcCcEEEEeccC
Q 025842 51 DVFGYEAPLFRKLADKVAGAGFLVVAPDFF 80 (247)
Q Consensus 51 gg~g~~~~~~~~~a~~la~~G~~v~~~d~~ 80 (247)
||-|.+ ..-..+|..|+++|+.|+++|.=
T Consensus 10 GGvGKT-T~~~nLA~~La~~G~kVlliD~D 38 (270)
T cd02040 10 GGIGKS-TTTQNLSAALAEMGKKVMIVGCD 38 (270)
T ss_pred CcCCHH-HHHHHHHHHHHhCCCeEEEEEcC
Confidence 444432 33467899999999999999984
No 378
>CHL00072 chlL photochlorophyllide reductase subunit L
Probab=27.00 E-value=57 Score=26.39 Aligned_cols=29 Identities=14% Similarity=-0.023 Sum_probs=22.0
Q ss_pred CccCCCcchHHHHHHHHHhcCcEEEEeccC
Q 025842 51 DVFGYEAPLFRKLADKVAGAGFLVVAPDFF 80 (247)
Q Consensus 51 gg~g~~~~~~~~~a~~la~~G~~v~~~d~~ 80 (247)
||-|.+ ..-..++..|+++|+.|+++|.=
T Consensus 9 GGVGKT-Tta~nLA~~La~~G~rVLlID~D 37 (290)
T CHL00072 9 GGIGKS-TTSCNISIALARRGKKVLQIGCD 37 (290)
T ss_pred CCCcHH-HHHHHHHHHHHHCCCeEEEEecc
Confidence 455543 33467899999999999999984
No 379
>KOG2170 consensus ATPase of the AAA+ superfamily [General function prediction only]
Probab=26.97 E-value=55 Score=26.81 Aligned_cols=51 Identities=16% Similarity=0.187 Sum_probs=30.0
Q ss_pred cCceEEEeecCCCCCCeEEEEEcCccCCCcchH-HHHHHHHHhcCcEEEEeccC
Q 025842 28 GGLNTYVTGSGPPDSKSAILLISDVFGYEAPLF-RKLADKVAGAGFLVVAPDFF 80 (247)
Q Consensus 28 ~~~~~~~~~p~~~~~~~~vv~~hgg~g~~~~~~-~~~a~~la~~G~~v~~~d~~ 80 (247)
..+..|+. .+...+|.+|-+||+.|...... +-+|+.+-..|..--.+.++
T Consensus 96 ~alk~~~~--n~~p~KPLvLSfHG~tGTGKN~Va~iiA~n~~~~Gl~S~~V~~f 147 (344)
T KOG2170|consen 96 NALKSHWA--NPNPRKPLVLSFHGWTGTGKNYVAEIIAENLYRGGLRSPFVHHF 147 (344)
T ss_pred HHHHHHhc--CCCCCCCeEEEecCCCCCchhHHHHHHHHHHHhccccchhHHHh
Confidence 44667777 34446788999998877543222 33555555556544444443
No 380
>PTZ00445 p36-lilke protein; Provisional
Probab=26.80 E-value=3e+02 Score=21.33 Aligned_cols=91 Identities=19% Similarity=0.128 Sum_probs=53.8
Q ss_pred hHHHHHHHHHhcCcEEEEeccCCCC-------CccCCCCcccchHHHHhhcCCccccchHHHHHHHHHhcCCCeEEEEEe
Q 025842 59 LFRKLADKVAGAGFLVVAPDFFYGD-------PIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSKGVSAIGAAGF 131 (247)
Q Consensus 59 ~~~~~a~~la~~G~~v~~~d~~~g~-------~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~ 131 (247)
....+.+.|.+.|..+++.|+- .. ++-.+.+.. . .-......++..++..+.+.+ =+|.++-+
T Consensus 30 ~~~~~v~~L~~~GIk~Va~D~D-nTlI~~HsgG~~~~~~~~---~-----~~~~~~tpefk~~~~~l~~~~-I~v~VVTf 99 (219)
T PTZ00445 30 SADKFVDLLNECGIKVIASDFD-LTMITKHSGGYIDPDNDD---I-----RVLTSVTPDFKILGKRLKNSN-IKISVVTF 99 (219)
T ss_pred HHHHHHHHHHHcCCeEEEecch-hhhhhhhcccccCCCcch---h-----hhhccCCHHHHHHHHHHHHCC-CeEEEEEc
Confidence 3456777888899999999983 11 110111000 0 011223466777777777664 37888888
Q ss_pred cccHH--------------HHHHhhcCC----CccEEEEecCCCCC
Q 025842 132 CWGGV--------------VAAKLASSH----DIQAAVVLHPGAIT 159 (247)
Q Consensus 132 S~Gg~--------------~a~~~a~~~----~i~~~v~~~~~~~~ 159 (247)
|-=.. +.-.+.... +|+.+.+++|.+..
T Consensus 100 Sd~~~~~~~~~~~~Isg~~li~~~lk~s~~~~~i~~~~~yyp~~w~ 145 (219)
T PTZ00445 100 SDKELIPSENRPRYISGDRMVEAALKKSKCDFKIKKVYAYYPKFWQ 145 (219)
T ss_pred cchhhccccCCcceechHHHHHHHHHhcCccceeeeeeeeCCcccC
Confidence 85433 444443322 88888889988643
No 381
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=26.74 E-value=75 Score=25.03 Aligned_cols=31 Identities=23% Similarity=0.146 Sum_probs=21.0
Q ss_pred HHHHHHHhcCC--CeEEEEEecccHHHHHHhhc
Q 025842 113 SVIAALKSKGV--SAIGAAGFCWGGVVAAKLAS 143 (247)
Q Consensus 113 ~~i~~l~~~~~--~~i~l~G~S~Gg~~a~~~a~ 143 (247)
-+++.+.+.+. ..-.+.|-|+|+..+..++.
T Consensus 17 GVl~aL~e~g~~~~~d~i~GtSAGAl~aa~~a~ 49 (245)
T cd07218 17 GVAVCLKKYAPHLLLNKISGASAGALAACCLLC 49 (245)
T ss_pred HHHHHHHHhCcccCCCeEEEEcHHHHHHHHHHh
Confidence 44555665542 12238999999999999774
No 382
>TIGR03709 PPK2_rel_1 polyphosphate:nucleotide phosphotransferase, PPK2 family. Members of this protein family belong to the polyphosphate kinase 2 (PPK2) family, which is not related in sequence to PPK1. While PPK1 tends to act in the biosynthesis of polyphosphate, or poly(P), members of the PPK2 family tend to use the terminal phosphate of poly(P) to regenerate ATP or GTP from the corresponding nucleoside diphosphate, or ADP from AMP as is the case with polyphosphate:AMP phosphotransferase (PAP). Members of this protein family most likely transfer the terminal phosphate between poly(P) and some nucleotide, but it is not clear which.
Probab=26.49 E-value=86 Score=25.11 Aligned_cols=39 Identities=15% Similarity=0.118 Sum_probs=28.5
Q ss_pred CCeEEEEEcCccCCC-cchHHHHHHHHHhcCcEEEEeccC
Q 025842 42 SKSAILLISDVFGYE-APLFRKLADKVAGAGFLVVAPDFF 80 (247)
Q Consensus 42 ~~~~vv~~hgg~g~~-~~~~~~~a~~la~~G~~v~~~d~~ 80 (247)
..|.||++.|.-+.. ....+.+...|..+|+.|.++.-+
T Consensus 54 ~~~vlIv~eG~DaAGKG~~I~~l~~~lDPRg~~V~s~~~P 93 (264)
T TIGR03709 54 RRSLLLVLQAMDAAGKDGTIRHVMSGVNPQGCQVTSFKAP 93 (264)
T ss_pred CCcEEEEEECCCCCCchHHHHHHHHhcCCCeeEEEeCCCC
Confidence 458888888655432 234567888888899999999763
No 383
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=26.47 E-value=2.4e+02 Score=24.88 Aligned_cols=67 Identities=9% Similarity=0.126 Sum_probs=39.8
Q ss_pred cccEEEeecCCCCCCCHHHHHHHHHHHHhccCCCeeEEEeCCCCccccccCCCC--ChHHHHHHHHHHHHHHHHHHH
Q 025842 167 KVPVAILGAEIDHVSPPEDLKRFGEILSAKLKNDCLVKIYPRVSHGWTVRYNVE--DEFAVKSAEEAHEDMINWLTK 241 (247)
Q Consensus 167 ~~P~l~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~H~~~~~~~~~--~~~~~~~~~~~~~~~~~fl~~ 241 (247)
..-|++.+|..|+.-. .-... ..+..+..+++.|+.|+-....... .+....+.+...+.+..||..
T Consensus 433 atnVvf~NG~~DPWh~----LG~~~----st~~~~~~~li~gtsHCaDMyp~~~sD~~~L~~aR~~i~~~l~~wl~~ 501 (514)
T KOG2182|consen 433 ATNVVFPNGSLDPWHA----LGLQN----STDSSVVSILINGTSHCADMYPARDSDSPSLKAARNRIDQNLARWLHQ 501 (514)
T ss_pred cceEEecCCCCCchhh----hcccc----CCCCCceEEEecCCccccccCCCCCCccHHHHHHHHHHHHHHHHHhhh
Confidence 4579999999998432 22222 1233678889999999987654432 222234444455555555544
No 384
>PF03698 UPF0180: Uncharacterised protein family (UPF0180); InterPro: IPR005370 The members of this family are small uncharacterised proteins.
Probab=26.00 E-value=81 Score=20.06 Aligned_cols=21 Identities=14% Similarity=0.234 Sum_probs=17.9
Q ss_pred hHHHHHHHHHhcCcEEEEecc
Q 025842 59 LFRKLADKVAGAGFLVVAPDF 79 (247)
Q Consensus 59 ~~~~~a~~la~~G~~v~~~d~ 79 (247)
.+..+.+.|.++||.|+-++.
T Consensus 9 ~Ls~v~~~L~~~GyeVv~l~~ 29 (80)
T PF03698_consen 9 GLSNVKEALREKGYEVVDLEN 29 (80)
T ss_pred CchHHHHHHHHCCCEEEecCC
Confidence 456788999999999999886
No 385
>PF07015 VirC1: VirC1 protein; InterPro: IPR009744 This family consists of several bacterial VirC1 proteins. In Agrobacterium tumefaciens, a cis-active 24-base-pair sequence adjacent to the right border of the T-DNA, called overdrive, stimulates tumour formation by increasing the level of T-DNA processing. It is thought that the virC operon, which enhances T-DNA processing probably, does so because the VirC1 protein interacts with overdrive. It has now been shown that the virC1 gene product binds to overdrive but not to the right border of T-DNA [].
Probab=25.87 E-value=1e+02 Score=24.09 Aligned_cols=34 Identities=26% Similarity=0.159 Sum_probs=25.8
Q ss_pred EEEEEc--CccCCCcchHHHHHHHHHhcCcEEEEecc
Q 025842 45 AILLIS--DVFGYEAPLFRKLADKVAGAGFLVVAPDF 79 (247)
Q Consensus 45 ~vv~~h--gg~g~~~~~~~~~a~~la~~G~~v~~~d~ 79 (247)
.|.|.. ||.|.+ ....-++..|+++|-.|..+|.
T Consensus 3 vItf~s~KGGaGKT-T~~~~LAs~la~~G~~V~lIDa 38 (231)
T PF07015_consen 3 VITFASSKGGAGKT-TAAMALASELAARGARVALIDA 38 (231)
T ss_pred eEEEecCCCCCcHH-HHHHHHHHHHHHCCCeEEEEeC
Confidence 444544 566654 4556799999999999999998
No 386
>cd01983 Fer4_NifH The Fer4_NifH superfamily contains a variety of proteins which share a common ATP-binding domain. Functionally, proteins in this superfamily use the energy from hydrolysis of NTP to transfer electron or ion.
Probab=25.76 E-value=1.1e+02 Score=19.08 Aligned_cols=20 Identities=35% Similarity=0.290 Sum_probs=16.4
Q ss_pred hHHHHHHHHHhcCcEEEEec
Q 025842 59 LFRKLADKVAGAGFLVVAPD 78 (247)
Q Consensus 59 ~~~~~a~~la~~G~~v~~~d 78 (247)
....++..|++.|+.|+.+|
T Consensus 15 ~~~~l~~~l~~~g~~v~~~~ 34 (99)
T cd01983 15 LAANLAAALAKRGKRVLLID 34 (99)
T ss_pred HHHHHHHHHHHCCCeEEEEC
Confidence 44678889988999998887
No 387
>PLN02748 tRNA dimethylallyltransferase
Probab=25.61 E-value=4.2e+02 Score=23.33 Aligned_cols=87 Identities=14% Similarity=0.089 Sum_probs=45.0
Q ss_pred CCCeEEEEEcCccCCCcchHHHHHHHHHhc-CcEEEEeccC---CCCCcc--CCCCcc-cch-------HHHHhhcCCcc
Q 025842 41 DSKSAILLISDVFGYEAPLFRKLADKVAGA-GFLVVAPDFF---YGDPIV--DLNNPQ-FDR-------EAWRKIHNTDK 106 (247)
Q Consensus 41 ~~~~~vv~~hgg~g~~~~~~~~~a~~la~~-G~~v~~~d~~---~g~~~~--~~~~~~-~~~-------~~~~~~~~~~~ 106 (247)
..++.+|++.|-.|... ..++..||.+ +..++..|.. .|..-+ .+...+ ..+ -.+...++...
T Consensus 19 ~~~~~~i~i~GptgsGK---s~la~~la~~~~~eii~~DsmQVYrgLdIgTaKpt~eE~~~VpHHLid~v~p~e~ysv~~ 95 (468)
T PLN02748 19 KGKAKVVVVMGPTGSGK---SKLAVDLASHFPVEIINADSMQVYSGLDVLTNKVPLHEQKGVPHHLLGVISPSVEFTAKD 95 (468)
T ss_pred CCCCCEEEEECCCCCCH---HHHHHHHHHhcCeeEEcCchheeeCCcchhcCCCCHHHHcCCCCeeEeecCCCCcCcHHH
Confidence 34566777776555432 3466667665 6788888842 332110 111000 000 01111233344
Q ss_pred ccchHHHHHHHHHhcCCCeEEEEE
Q 025842 107 GYVDAKSVIAALKSKGVSAIGAAG 130 (247)
Q Consensus 107 ~~~d~~~~i~~l~~~~~~~i~l~G 130 (247)
+..++..+|+.+...+.-+|.+.|
T Consensus 96 F~~~A~~~I~~I~~rgk~PIlVGG 119 (468)
T PLN02748 96 FRDHAVPLIEEILSRNGLPVIVGG 119 (468)
T ss_pred HHHHHHHHHHHHHhcCCCeEEEcC
Confidence 457788888888777755666554
No 388
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=25.55 E-value=1.6e+02 Score=24.75 Aligned_cols=40 Identities=25% Similarity=0.303 Sum_probs=31.6
Q ss_pred CCCCeEEEEEcCccCCCcchHHHHHHHHHhcCcEEEEeccC
Q 025842 40 PDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF 80 (247)
Q Consensus 40 ~~~~~~vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~~ 80 (247)
..++.++|++-|-.|.+ ..+..-|..||..||.|-..-|.
T Consensus 10 ~~k~ra~vvVLGDvGRS-PRMqYHA~Sla~~gf~VdliGy~ 49 (444)
T KOG2941|consen 10 SKKKRAIVVVLGDVGRS-PRMQYHALSLAKLGFQVDLIGYV 49 (444)
T ss_pred cccceEEEEEecccCCC-hHHHHHHHHHHHcCCeEEEEEec
Confidence 34566777777777864 67888999999999999888874
No 389
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3. PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=25.53 E-value=84 Score=24.89 Aligned_cols=31 Identities=19% Similarity=0.130 Sum_probs=21.5
Q ss_pred HHHHHHHhcCCC----eEEEEEecccHHHHHHhhc
Q 025842 113 SVIAALKSKGVS----AIGAAGFCWGGVVAAKLAS 143 (247)
Q Consensus 113 ~~i~~l~~~~~~----~i~l~G~S~Gg~~a~~~a~ 143 (247)
-+++.|.+.+.+ .-.+.|-|.|+..+..++.
T Consensus 17 GVl~aL~e~~~~l~~~~~~i~GtSAGAl~aa~~as 51 (252)
T cd07221 17 GVTRCLSERAPHLLRDARMFFGASAGALHCVTFLS 51 (252)
T ss_pred HHHHHHHHhCcchhccCCEEEEEcHHHHHHHHHHh
Confidence 445555555432 3468899999999998774
No 390
>PLN02572 UDP-sulfoquinovose synthase
Probab=25.47 E-value=1.1e+02 Score=26.45 Aligned_cols=31 Identities=19% Similarity=0.116 Sum_probs=23.3
Q ss_pred EEEEcCccCCCcchHHHHHHHHHhcCcEEEEecc
Q 025842 46 ILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDF 79 (247)
Q Consensus 46 vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~ 79 (247)
-|++-|+.|.- -..+++.|+++|+.|+++|-
T Consensus 49 ~VLVTGatGfI---Gs~Lv~~L~~~G~~V~~~d~ 79 (442)
T PLN02572 49 KVMVIGGDGYC---GWATALHLSKRGYEVAIVDN 79 (442)
T ss_pred EEEEECCCcHH---HHHHHHHHHHCCCeEEEEec
Confidence 36666666642 25789999999999999984
No 391
>PRK08177 short chain dehydrogenase; Provisional
Probab=25.43 E-value=1e+02 Score=23.33 Aligned_cols=32 Identities=25% Similarity=0.067 Sum_probs=22.9
Q ss_pred EEEEcCccCCCcchHHHHHHHHHhcCcEEEEeccC
Q 025842 46 ILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF 80 (247)
Q Consensus 46 vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~~ 80 (247)
.+++.|+.+. .-..+++.|+++|+.|++.+..
T Consensus 3 ~vlItG~sg~---iG~~la~~l~~~G~~V~~~~r~ 34 (225)
T PRK08177 3 TALIIGASRG---LGLGLVDRLLERGWQVTATVRG 34 (225)
T ss_pred EEEEeCCCch---HHHHHHHHHHhCCCEEEEEeCC
Confidence 4556655543 2356889999999999999863
No 392
>COG2312 Erythromycin esterase homolog [General function prediction only]
Probab=25.23 E-value=1.6e+02 Score=25.09 Aligned_cols=24 Identities=17% Similarity=0.333 Sum_probs=17.9
Q ss_pred chHHHHHHHHHhcC-----CCeEEEEEec
Q 025842 109 VDAKSVIAALKSKG-----VSAIGAAGFC 132 (247)
Q Consensus 109 ~d~~~~i~~l~~~~-----~~~i~l~G~S 132 (247)
.++.++++||++.+ ..++.+.|+-
T Consensus 118 ~~v~~lv~wlr~~na~r~~~~~~~f~g~D 146 (405)
T COG2312 118 AEVRDLVEWLREFNAARSAGPQVGFYGFD 146 (405)
T ss_pred HHHHHHHHHHHHHhccCCcccccceeecc
Confidence 58999999999862 2467777763
No 393
>PRK05368 homoserine O-succinyltransferase; Provisional
Probab=25.19 E-value=76 Score=25.97 Aligned_cols=30 Identities=17% Similarity=0.306 Sum_probs=24.8
Q ss_pred hHHHHHHHHHhcCCCeEEEEEecccHHHHHHhh
Q 025842 110 DAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLA 142 (247)
Q Consensus 110 d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a 142 (247)
.+..+++++++. .+-++|.|+|+++++.+.
T Consensus 123 El~~i~~w~~~~---~~s~LgICwGaQa~a~al 152 (302)
T PRK05368 123 ELKEILDWAKTH---VTSTLFICWAAQAALYHL 152 (302)
T ss_pred HHHHHHHHHHHc---CCCEEEEcHHHHHHHHHc
Confidence 478888998876 467899999999998765
No 394
>cd08178 AAD_C C-terminal alcohol dehydrogenase domain of the acetaldehyde dehydrogenase-alcohol dehydrogenase bifunctional two-domain protein (AAD). Alcohol dehydrogenase domain located on the C-terminal of a bifunctional two-domain protein. The N-terminal of the protein contains an acetaldehyde-CoA dehydrogenase domain. This protein is involved in pyruvate metabolism. Pyruvate is converted to acetyl-CoA and formate by pyruvate formate-lysase (PFL). Under anaerobic condition, acetyl-CoA is reduced to acetaldehyde and ethanol by this two-domain protein. Acetyl-CoA is first converted into an enzyme-bound thiohemiacetal by the N-terminal acetaldehyde dehydrogenase domain. The enzyme-bound thiohemiacetal is subsequently reduced by the C-terminal NAD+-dependent alcohol dehydrogenase domain. In E. coli, this protein is called AdhE and was shown pyruvate formate-lysase (PFL) deactivase activity, which is involved in the inactivation of PFL, a key enzyme in anaerobic metabolism. In Escherichi
Probab=25.19 E-value=3.1e+02 Score=23.32 Aligned_cols=64 Identities=17% Similarity=0.138 Sum_probs=38.1
Q ss_pred EEEEEcCccCCCcchHHHHHHHHHhcCcEEEEeccCCCCCccCCCCcccchHHHHhhcCCccccchHHHHHHHHHhcCCC
Q 025842 45 AILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSKGVS 124 (247)
Q Consensus 45 ~vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~ 124 (247)
.++++.+..-........+.+.|.+.|+.+..++-..+.+. .+.+...++.+++.+.+
T Consensus 23 k~liVtd~~~~~~g~~~~v~~~L~~~gi~~~~f~~v~~~p~----------------------~~~v~~~~~~~~~~~~D 80 (398)
T cd08178 23 RAFIVTDRFMVKLGYVDKVIDVLKRRGVETEVFSDVEPDPS----------------------LETVRKGLELMNSFKPD 80 (398)
T ss_pred eEEEEcChhHHhCccHHHHHHHHHHCCCeEEEecCCCCCcC----------------------HHHHHHHHHHHHhcCCC
Confidence 35555532212223556678888888988877664212211 15677788888887767
Q ss_pred eEEEEE
Q 025842 125 AIGAAG 130 (247)
Q Consensus 125 ~i~l~G 130 (247)
-|+-+|
T Consensus 81 ~IIaiG 86 (398)
T cd08178 81 TIIALG 86 (398)
T ss_pred EEEEeC
Confidence 666444
No 395
>cd08192 Fe-ADH7 Iron-containing alcohol dehydrogenases-like, involved in the linear alkylbenzenesulfonate (LAS) degradation pathway. NAD-dependent iron-containing alcohol dehydrogenase-like. Proteins in this family are NAD-dependent alcohol dehydrogenases which are involved in the linear alkylbenzenesulfonate (LAS) degradation pathway. They catalyze the oxidation of beta-hydroxy CoA ester to beta-oxo CoA ester, which then be subject to CoA-dependent thiolysis to yield acetyl-CoA and 6-C8-SPC-CoA. The major laundry surfactant in worldwide use is commercial linear alkylbenzenesulfonate (LAS) which contains 20 congeners of linear alkanes (C10 to C13). LAS is fully biodegradable in oxic environments. Degradation involves microbial communities. Parvibaculum lavamentivorans DS-1T is a representative member of many heterotrophic, LAS-degrading communities, in which it catalyzes the first steps of LAS degradation. Strain DS-1T is a small heterotrophic bacterium able to omega-oxygenate the comm
Probab=25.01 E-value=4.1e+02 Score=22.28 Aligned_cols=64 Identities=19% Similarity=0.172 Sum_probs=37.8
Q ss_pred EEEEEcCccCCCcchHHHHHHHHHhcCcEEEEeccCCCCCccCCCCcccchHHHHhhcCCccccchHHHHHHHHHhcCCC
Q 025842 45 AILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSKGVS 124 (247)
Q Consensus 45 ~vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~ 124 (247)
.++++.+..-........+.+.|.+.|..+..++-..+.+. .+.+.++++..++.+.+
T Consensus 26 ~~liv~~~~~~~~~~~~~v~~~L~~~g~~~~~~~~v~~~p~----------------------~~~v~~~~~~~~~~~~d 83 (370)
T cd08192 26 RPLIVTDPGLAALGLVARVLALLEDAGLAAALFDEVPPNPT----------------------EAAVEAGLAAYRAGGCD 83 (370)
T ss_pred eEEEEcCcchhhCccHHHHHHHHHHcCCeEEEeCCCCCCCC----------------------HHHHHHHHHHHHhcCCC
Confidence 34555532222223456788888888888877764212111 15677788888877767
Q ss_pred eEEEEE
Q 025842 125 AIGAAG 130 (247)
Q Consensus 125 ~i~l~G 130 (247)
-|+-+|
T Consensus 84 ~IIaiG 89 (370)
T cd08192 84 GVIAFG 89 (370)
T ss_pred EEEEeC
Confidence 666444
No 396
>PLN00414 glycosyltransferase family protein
Probab=24.97 E-value=1.2e+02 Score=26.33 Aligned_cols=38 Identities=26% Similarity=0.223 Sum_probs=27.1
Q ss_pred CCeEEEEEcCccCC-CcchHHHHHHHHHhcCcEEEEeccC
Q 025842 42 SKSAILLISDVFGY-EAPLFRKLADKVAGAGFLVVAPDFF 80 (247)
Q Consensus 42 ~~~~vv~~hgg~g~-~~~~~~~~a~~la~~G~~v~~~d~~ 80 (247)
.++.||+++ ..+. +-.-+..+++.|+++|+.|..+...
T Consensus 3 ~~~HVvlvP-fpaqGHi~PmL~LAk~Las~G~~VT~vtt~ 41 (446)
T PLN00414 3 SKFHAFMYP-WFGFGHMIPYLHLANKLAEKGHRVTFFLPK 41 (446)
T ss_pred CCCEEEEec-CcccchHHHHHHHHHHHHhCCCEEEEEeCC
Confidence 356788888 5552 3334568999999999988876654
No 397
>COG3727 Vsr DNA G:T-mismatch repair endonuclease [DNA replication, recombination, and repair]
Probab=24.95 E-value=1.9e+02 Score=20.43 Aligned_cols=18 Identities=11% Similarity=0.056 Sum_probs=13.5
Q ss_pred HHHHHHHhcCcEEEEecc
Q 025842 62 KLADKVAGAGFLVVAPDF 79 (247)
Q Consensus 62 ~~a~~la~~G~~v~~~d~ 79 (247)
.....|.+.||.|+++-=
T Consensus 99 r~~~~L~~~GwrvlvVWE 116 (150)
T COG3727 99 RDIKRLQQLGWRVLVVWE 116 (150)
T ss_pred HHHHHHHHcCCeEEEEEe
Confidence 344578888999998863
No 398
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=24.72 E-value=1e+02 Score=25.21 Aligned_cols=34 Identities=21% Similarity=0.064 Sum_probs=23.1
Q ss_pred EEEEcCccCCCcchHHHHHHHHHhcCcEEEEecc
Q 025842 46 ILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDF 79 (247)
Q Consensus 46 vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~ 79 (247)
|++.-|+.|++......+++.|.++|+.|..+-.
T Consensus 2 ~~~~~~~~gG~~~~~~~la~~l~~~G~ev~v~~~ 35 (350)
T cd03785 2 ILIAGGGTGGHIFPALALAEELRERGAEVLFLGT 35 (350)
T ss_pred EEEEecCchhhhhHHHHHHHHHHhCCCEEEEEEC
Confidence 3444455555444445889999999999987754
No 399
>PLN03049 pyridoxine (pyridoxamine) 5'-phosphate oxidase; Provisional
Probab=24.45 E-value=1.1e+02 Score=26.88 Aligned_cols=34 Identities=12% Similarity=-0.114 Sum_probs=26.7
Q ss_pred EEEEEcCccCCCcchHHHHHHHHHhcCcEEEEecc
Q 025842 45 AILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDF 79 (247)
Q Consensus 45 ~vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~ 79 (247)
.|+++. |.|.+..+-.-+|++|...||.|.++-.
T Consensus 61 ~VlVlc-G~GNNGGDGlv~AR~L~~~G~~V~v~~~ 94 (462)
T PLN03049 61 RVLALC-GPGNNGGDGLVAARHLHHFGYKPSICYP 94 (462)
T ss_pred EEEEEE-CCCCCHHHHHHHHHHHHHCCCceEEEEE
Confidence 477777 6676666667789999999999887765
No 400
>PRK12828 short chain dehydrogenase; Provisional
Probab=24.18 E-value=1.2e+02 Score=22.96 Aligned_cols=31 Identities=29% Similarity=0.204 Sum_probs=22.9
Q ss_pred EEEEcCccCCCcchHHHHHHHHHhcCcEEEEecc
Q 025842 46 ILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDF 79 (247)
Q Consensus 46 vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~ 79 (247)
.+++.|+.|. --..+++.|+++|+.|+..+.
T Consensus 9 ~vlItGatg~---iG~~la~~l~~~G~~v~~~~r 39 (239)
T PRK12828 9 VVAITGGFGG---LGRATAAWLAARGARVALIGR 39 (239)
T ss_pred EEEEECCCCc---HhHHHHHHHHHCCCeEEEEeC
Confidence 4666755553 225788999999999999886
No 401
>TIGR01007 eps_fam capsular exopolysaccharide family. This model describes the capsular exopolysaccharide proteins in bacteria. The exopolysaccharide gene cluster consists of several genes which encode a number of proteins which regulate the exoploysaccharide biosynthesis(EPS). Atleast 13 genes espA to espM in streptococcus species seem to direct the EPS proteins and all of which share high homology. Functional roles were characterized by gene disruption experiments which resulted in exopolysaccharide-deficient phenotypes.
Probab=24.16 E-value=1.9e+02 Score=21.69 Aligned_cols=21 Identities=24% Similarity=0.094 Sum_probs=18.1
Q ss_pred HHHHHHHHHhcCcEEEEeccC
Q 025842 60 FRKLADKVAGAGFLVVAPDFF 80 (247)
Q Consensus 60 ~~~~a~~la~~G~~v~~~d~~ 80 (247)
-..+|..|+++|+.|+.+|.-
T Consensus 35 a~~LA~~la~~G~rVllID~D 55 (204)
T TIGR01007 35 SANIAVAFAQAGYKTLLIDGD 55 (204)
T ss_pred HHHHHHHHHhCCCeEEEEeCC
Confidence 457889999999999999973
No 402
>PRK08703 short chain dehydrogenase; Provisional
Probab=24.05 E-value=1.5e+02 Score=22.68 Aligned_cols=31 Identities=23% Similarity=0.167 Sum_probs=22.7
Q ss_pred EEEEcCccCCCcchHHHHHHHHHhcCcEEEEecc
Q 025842 46 ILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDF 79 (247)
Q Consensus 46 vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~ 79 (247)
.+++.|+.+. .-..+++.|+++|+.|+..+.
T Consensus 8 ~vlItG~sgg---iG~~la~~l~~~g~~V~~~~r 38 (239)
T PRK08703 8 TILVTGASQG---LGEQVAKAYAAAGATVILVAR 38 (239)
T ss_pred EEEEECCCCc---HHHHHHHHHHHcCCEEEEEeC
Confidence 5566655443 335789999999999999875
No 403
>cd03414 CbiX_SirB_C Sirohydrochlorin cobalt chelatase (CbiX) and sirohydrochlorin iron chelatase (SirB), C-terminal domain. SirB catalyzes the ferro-chelation of sirohydrochlorin to siroheme, the prosthetic group of sulfite and nitrite reductases. CbiX is a cobaltochelatase, responsible for the chelation of Co2+ into sirohydrochlorin, an important step in the vitamin B12 biosynthetic pathway. CbiX often contains a C-terminal histidine-rich region that may be important for metal delivery and/or storage, and may also contain an iron-sulfur center. Both CbiX and SirB are found in a wide range of bacteria.
Probab=24.03 E-value=2.3e+02 Score=18.94 Aligned_cols=22 Identities=9% Similarity=0.125 Sum_probs=14.5
Q ss_pred chHHHHHHHHHhcCCCeEEEEE
Q 025842 109 VDAKSVIAALKSKGVSAIGAAG 130 (247)
Q Consensus 109 ~d~~~~i~~l~~~~~~~i~l~G 130 (247)
.++.++++.+.+.+.++|.++=
T Consensus 45 P~~~~~l~~l~~~g~~~i~vvP 66 (117)
T cd03414 45 PSLPEALERLRALGARRVVVLP 66 (117)
T ss_pred CCHHHHHHHHHHcCCCEEEEEe
Confidence 3466777777777766666543
No 404
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=24.00 E-value=1.5e+02 Score=24.18 Aligned_cols=33 Identities=12% Similarity=0.273 Sum_probs=21.9
Q ss_pred eEEEEEcCccC----CCcchHHHHHHHHHhcCcEEEE
Q 025842 44 SAILLISDVFG----YEAPLFRKLADKVAGAGFLVVA 76 (247)
Q Consensus 44 ~~vv~~hgg~g----~~~~~~~~~a~~la~~G~~v~~ 76 (247)
+-|++.||+.. +..+.|..+++.|.++|+.++.
T Consensus 179 ~~i~~~~~~s~~~k~Wp~e~~a~li~~l~~~~~~ivl 215 (322)
T PRK10964 179 PYLVFLHATTRDDKHWPEAHWRELIGLLAPSGLRIKL 215 (322)
T ss_pred CeEEEEeCCCcccccCCHHHHHHHHHHHHHCCCeEEE
Confidence 44556665432 3344578888999888998765
No 405
>PRK11460 putative hydrolase; Provisional
Probab=23.97 E-value=3.3e+02 Score=21.01 Aligned_cols=39 Identities=13% Similarity=-0.066 Sum_probs=24.4
Q ss_pred CCeEEEEEcCccCC--CcchHHHHHHHHHhcCcEEEEeccC
Q 025842 42 SKSAILLISDVFGY--EAPLFRKLADKVAGAGFLVVAPDFF 80 (247)
Q Consensus 42 ~~~~vv~~hgg~g~--~~~~~~~~a~~la~~G~~v~~~d~~ 80 (247)
..++|+++||-... .......+.+.|.+.|..+-...++
T Consensus 147 ~~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~ 187 (232)
T PRK11460 147 TATTIHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIVE 187 (232)
T ss_pred CCCcEEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEEC
Confidence 45778999955542 2233456777887778766555553
No 406
>PRK15454 ethanol dehydrogenase EutG; Provisional
Probab=23.94 E-value=4.5e+02 Score=22.41 Aligned_cols=51 Identities=22% Similarity=0.270 Sum_probs=34.1
Q ss_pred chHHHHHHHHHhcCcEEEEeccCCCCCccCCCCcccchHHHHhhcCCccccchHHHHHHHHHhcCCCeEEEEE
Q 025842 58 PLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSKGVSAIGAAG 130 (247)
Q Consensus 58 ~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G 130 (247)
..+..+.+.|.+.|..+..+|-..+.+. .+.+.+.++..++.+.+-|+-+|
T Consensus 64 g~~~~v~~~L~~~gi~~~~~~~v~~~P~----------------------~~~v~~~~~~~r~~~~D~IiavG 114 (395)
T PRK15454 64 GMTAGLTRSLAVKGIAMTLWPCPVGEPC----------------------ITDVCAAVAQLRESGCDGVIAFG 114 (395)
T ss_pred ccHHHHHHHHHHcCCeEEEECCCCCCcC----------------------HHHHHHHHHHHHhcCcCEEEEeC
Confidence 4566778888888887777754222221 15677888888888777776555
No 407
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=23.87 E-value=1.2e+02 Score=23.33 Aligned_cols=16 Identities=19% Similarity=0.154 Sum_probs=14.0
Q ss_pred HHHHHhcCcEEEEecc
Q 025842 64 ADKVAGAGFLVVAPDF 79 (247)
Q Consensus 64 a~~la~~G~~v~~~d~ 79 (247)
+..||++||.|+.+|.
T Consensus 52 a~~LA~~G~~V~avD~ 67 (218)
T PRK13255 52 MLWLAEQGHEVLGVEL 67 (218)
T ss_pred HHHHHhCCCeEEEEcc
Confidence 4577889999999998
No 408
>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function. One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].
Probab=23.59 E-value=1.3e+02 Score=24.57 Aligned_cols=32 Identities=28% Similarity=0.394 Sum_probs=23.8
Q ss_pred EEEEcCccCCCcchHHHHHHHHHhcCcEEEEecc
Q 025842 46 ILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDF 79 (247)
Q Consensus 46 vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~ 79 (247)
||++.|.. +...-+.++-.|.++||.|++--.
T Consensus 5 vVvI~Gs~--~~PltR~la~DLeRRGFIV~v~~~ 36 (299)
T PF08643_consen 5 VVVIAGSP--HDPLTRSLALDLERRGFIVYVTVS 36 (299)
T ss_pred EEEEECCC--CCccHHHHHHHHhhCCeEEEEEeC
Confidence 55666443 346678899999999999998765
No 409
>cd08185 Fe-ADH1 Iron-containing alcohol dehydrogenases-like. Iron-containing alcohol dehydrogenases-like (ADH). Alcohol dehydrogenase catalyzes the reduction of acetaldehyde to alcohol with NADP as cofactor. Its activity requires iron ions. The protein structure represents a dehydroquinate synthase fold and is a member of the iron-containing alcohol dehydrogenase-like family. They are distinct from other alcohol dehydrogenases which contain different protein domains. Proteins of this family have not been characterized. Their specific function is unknown. They are present in bacteria and archaea.
Probab=23.55 E-value=4.5e+02 Score=22.16 Aligned_cols=64 Identities=16% Similarity=0.164 Sum_probs=39.8
Q ss_pred EEEEEcCccC-CCcchHHHHHHHHHhcCcEEEEeccCCCCCccCCCCcccchHHHHhhcCCccccchHHHHHHHHHhcCC
Q 025842 45 AILLISDVFG-YEAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSKGV 123 (247)
Q Consensus 45 ~vv~~hgg~g-~~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~ 123 (247)
.++++.+... .....+..+.+.|.+.|..+..++-..+.+. .+.+.+.++.+++.+.
T Consensus 27 r~livt~~~~~~~~g~~~~v~~~L~~~~~~~~~~~~v~~~p~----------------------~~~v~~~~~~~~~~~~ 84 (380)
T cd08185 27 KALIVTGNGSSKKTGYLDRVIELLKQAGVEVVVFDKVEPNPT----------------------TTTVMEGAALAREEGC 84 (380)
T ss_pred eEEEEeCCCchhhccHHHHHHHHHHHcCCeEEEeCCccCCCC----------------------HHHHHHHHHHHHHcCC
Confidence 4666664433 1334566788888888888776653212211 1667788888888777
Q ss_pred CeEEEEE
Q 025842 124 SAIGAAG 130 (247)
Q Consensus 124 ~~i~l~G 130 (247)
+-|+-+|
T Consensus 85 D~IiavG 91 (380)
T cd08185 85 DFVVGLG 91 (380)
T ss_pred CEEEEeC
Confidence 7776555
No 410
>PRK13232 nifH nitrogenase reductase; Reviewed
Probab=23.24 E-value=59 Score=25.85 Aligned_cols=29 Identities=10% Similarity=0.054 Sum_probs=21.6
Q ss_pred CccCCCcchHHHHHHHHHhcCcEEEEeccC
Q 025842 51 DVFGYEAPLFRKLADKVAGAGFLVVAPDFF 80 (247)
Q Consensus 51 gg~g~~~~~~~~~a~~la~~G~~v~~~d~~ 80 (247)
||-|.+ ..-..+|-.|+++|+.|+.+|.-
T Consensus 10 GGVGKT-T~a~nLA~~La~~G~rVllvD~D 38 (273)
T PRK13232 10 GGIGKS-TTTQNLTAALSTMGNKILLVGCD 38 (273)
T ss_pred CCCcHH-HHHHHHHHHHHhhCCCeEEEecc
Confidence 344432 23457899999999999999985
No 411
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=23.24 E-value=1.5e+02 Score=23.00 Aligned_cols=31 Identities=23% Similarity=0.089 Sum_probs=22.5
Q ss_pred EEEEcCccCCCcchHHHHHHHHHhcCcEEEEecc
Q 025842 46 ILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDF 79 (247)
Q Consensus 46 vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~ 79 (247)
.+++.|+.+. --..+++.|+++|+.|+..+.
T Consensus 12 ~vlItGa~g~---iG~~ia~~l~~~G~~V~~~~r 42 (255)
T PRK07523 12 RALVTGSSQG---IGYALAEGLAQAGAEVILNGR 42 (255)
T ss_pred EEEEECCcch---HHHHHHHHHHHcCCEEEEEeC
Confidence 4666655443 235788999999999998875
No 412
>KOG3079 consensus Uridylate kinase/adenylate kinase [Nucleotide transport and metabolism]
Probab=22.97 E-value=1.7e+02 Score=22.21 Aligned_cols=36 Identities=17% Similarity=0.217 Sum_probs=23.3
Q ss_pred CCCCeEEEEEcCccCCCcchHHHHHHHHHh-cCcEEEEec
Q 025842 40 PDSKSAILLISDVFGYEAPLFRKLADKVAG-AGFLVVAPD 78 (247)
Q Consensus 40 ~~~~~~vv~~hgg~g~~~~~~~~~a~~la~-~G~~v~~~d 78 (247)
.-..++|||+-||.|+... -++..+++ .||.-++..
T Consensus 4 ~~~~~~IifVlGGPGsgKg---TqC~kiv~ky~ftHlSaG 40 (195)
T KOG3079|consen 4 KLDKPPIIFVLGGPGSGKG---TQCEKIVEKYGFTHLSAG 40 (195)
T ss_pred cccCCCEEEEEcCCCCCcc---hHHHHHHHHcCceeecHH
Confidence 3356889999999987543 24455544 377766654
No 413
>PLN02918 pyridoxine (pyridoxamine) 5'-phosphate oxidase
Probab=22.89 E-value=1.2e+02 Score=27.13 Aligned_cols=33 Identities=15% Similarity=-0.047 Sum_probs=25.9
Q ss_pred EEEEEcCccCCCcchHHHHHHHHHhcCcEEEEec
Q 025842 45 AILLISDVFGYEAPLFRKLADKVAGAGFLVVAPD 78 (247)
Q Consensus 45 ~vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d 78 (247)
.|+++. |.|.+..+-.-.|++|...||.|.++-
T Consensus 137 ~VlVlc-GpGNNGGDGLVaAR~L~~~G~~V~V~~ 169 (544)
T PLN02918 137 RVLAIC-GPGNNGGDGLVAARHLHHFGYKPFVCY 169 (544)
T ss_pred EEEEEE-CCCcCHHHHHHHHHHHHHCCCceEEEE
Confidence 477777 667666666778999999999988765
No 414
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=22.88 E-value=1.1e+02 Score=23.57 Aligned_cols=37 Identities=19% Similarity=0.170 Sum_probs=19.8
Q ss_pred CeEEEEEcCccC----CCcchHHHHHHHHHhcCcEEEEecc
Q 025842 43 KSAILLISDVFG----YEAPLFRKLADKVAGAGFLVVAPDF 79 (247)
Q Consensus 43 ~~~vv~~hgg~g----~~~~~~~~~a~~la~~G~~v~~~d~ 79 (247)
++.|++.++... +..+.|..+++.|.++|+.|+.+-.
T Consensus 105 ~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~~~vvl~g~ 145 (247)
T PF01075_consen 105 KPYIGINPGASWPSKRWPAEKWAELIERLKERGYRVVLLGG 145 (247)
T ss_dssp SSEEEEE---SSGGGS--HHHHHHHHHHHCCCT-EEEE--S
T ss_pred CCeEEEeecCCCccccCCHHHHHHHHHHHHhhCceEEEEcc
Confidence 455555554333 3344578899999888877776544
No 415
>cd02036 MinD Bacterial cell division requires the formation of a septum at mid-cell. The site is determined by the min operon products MinC, MinD and MinE. MinC is a nonspecific inhibitor of the septum protein FtsZ. MinE is the supressor of MinC. MinD plays a pivotal role, selecting the mid-cell over other sites through the activation and regulation of MinC and MinE. MinD is a membrane-associated ATPase, related to nitrogenase iron protein. More distantly related proteins include flagellar biosynthesis proteins and ParA chromosome partitioning proteins. MinD is a monomer.
Probab=22.81 E-value=1.1e+02 Score=22.04 Aligned_cols=28 Identities=25% Similarity=0.230 Sum_probs=21.3
Q ss_pred CccCCCcchHHHHHHHHHhcCcEEEEecc
Q 025842 51 DVFGYEAPLFRKLADKVAGAGFLVVAPDF 79 (247)
Q Consensus 51 gg~g~~~~~~~~~a~~la~~G~~v~~~d~ 79 (247)
||-|.+ ..-..++..|+++|+.|+.+|.
T Consensus 9 gG~GKt-t~a~~la~~l~~~g~~vllvD~ 36 (179)
T cd02036 9 GGVGKT-TTTANLGTALAQLGYKVVLIDA 36 (179)
T ss_pred CCCCHH-HHHHHHHHHHHhCCCeEEEEeC
Confidence 455543 3446788999999999999997
No 416
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=22.74 E-value=1.1e+02 Score=25.31 Aligned_cols=34 Identities=18% Similarity=0.090 Sum_probs=24.4
Q ss_pred EEEEcCcc--CCCcchHHHHHHHHHhcCcEEEEecc
Q 025842 46 ILLISDVF--GYEAPLFRKLADKVAGAGFLVVAPDF 79 (247)
Q Consensus 46 vv~~hgg~--g~~~~~~~~~a~~la~~G~~v~~~d~ 79 (247)
|+++|..+ |+.......+++.|+++|+.|.++-.
T Consensus 3 Il~~~~~~~~gG~e~~~~~la~~L~~~G~~V~v~~~ 38 (392)
T cd03805 3 VAFIHPDLGIGGAERLVVDAALALQSRGHEVTIYTS 38 (392)
T ss_pred EEEECCCCCCchHHHHHHHHHHHHHhCCCeEEEEcC
Confidence 56666443 33344567899999999999988764
No 417
>PRK00923 sirohydrochlorin cobaltochelatase; Reviewed
Probab=22.72 E-value=2.6e+02 Score=19.09 Aligned_cols=22 Identities=14% Similarity=0.099 Sum_probs=15.9
Q ss_pred chHHHHHHHHHhcCCCeEEEEE
Q 025842 109 VDAKSVIAALKSKGVSAIGAAG 130 (247)
Q Consensus 109 ~d~~~~i~~l~~~~~~~i~l~G 130 (247)
.++.++++.+...+..+|.++=
T Consensus 46 P~l~~~l~~l~~~g~~~v~vvP 67 (126)
T PRK00923 46 PTIPEALKKLIGTGADKIIVVP 67 (126)
T ss_pred CCHHHHHHHHHHcCCCEEEEEc
Confidence 3466788888887777877653
No 418
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=22.70 E-value=73 Score=24.46 Aligned_cols=16 Identities=19% Similarity=0.233 Sum_probs=14.3
Q ss_pred HHHHHhcCcEEEEecc
Q 025842 64 ADKVAGAGFLVVAPDF 79 (247)
Q Consensus 64 a~~la~~G~~v~~~d~ 79 (247)
+..||++||.|+.+|.
T Consensus 49 a~~LA~~G~~V~gvD~ 64 (213)
T TIGR03840 49 LAWLAEQGHRVLGVEL 64 (213)
T ss_pred HHHHHhCCCeEEEEeC
Confidence 5678899999999998
No 419
>PF01872 RibD_C: RibD C-terminal domain; InterPro: IPR002734 This domain is found in the C terminus of the bifunctional deaminase-reductase of Escherichia coli, Bacillus subtilis and other bacteria in combination with IPR002125 from INTERPRO that catalyses the second and third steps in the biosynthesis of riboflavin, i.e., the deamination of 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate (deaminase) and the subsequent reduction of the ribosyl side chain (reductase) []. The domain is also present in some HTP reductases from archaea and fungi.; GO: 0008703 5-amino-6-(5-phosphoribosylamino)uracil reductase activity, 0009231 riboflavin biosynthetic process, 0055114 oxidation-reduction process; PDB: 3KY8_B 3KGY_B 2GD9_B 3JTW_B 2XW7_B 2D5N_B 2B3Z_A 3EX8_B 2AZN_A 2P4G_A ....
Probab=22.69 E-value=3.1e+02 Score=20.47 Aligned_cols=34 Identities=26% Similarity=0.434 Sum_probs=27.2
Q ss_pred chHHHHHHHHHhcCCCeEEEEEecccHHHHHHhhcCC
Q 025842 109 VDAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLASSH 145 (247)
Q Consensus 109 ~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 145 (247)
.|+..+++.|++.+..+|.+.| ||.+.-.+....
T Consensus 121 ~dl~~~l~~L~~~g~~~i~v~G---G~~l~~~~l~~g 154 (200)
T PF01872_consen 121 VDLEEALRRLKERGGKDILVEG---GGSLNGSFLRAG 154 (200)
T ss_dssp EHHHHHHHHHHHTTTSEEEEEE---HHHHHHHHHHTT
T ss_pred cCHHHHHHHHHhcCCCEEEEec---hHHHHHHHHhCC
Confidence 5688999999999888999988 777766666554
No 420
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=22.54 E-value=87 Score=22.11 Aligned_cols=27 Identities=22% Similarity=0.092 Sum_probs=19.9
Q ss_pred CCCcchHHHHHHHHHhcCcEEEEeccC
Q 025842 54 GYEAPLFRKLADKVAGAGFLVVAPDFF 80 (247)
Q Consensus 54 g~~~~~~~~~a~~la~~G~~v~~~d~~ 80 (247)
|+.......+++.|+++|+.|.++-..
T Consensus 12 GG~e~~~~~l~~~l~~~G~~v~v~~~~ 38 (177)
T PF13439_consen 12 GGAERVVLNLARALAKRGHEVTVVSPG 38 (177)
T ss_dssp SHHHHHHHHHHHHHHHTT-EEEEEESS
T ss_pred ChHHHHHHHHHHHHHHCCCEEEEEEcC
Confidence 333445678999999999999999764
No 421
>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]
Probab=22.52 E-value=1.4e+02 Score=24.47 Aligned_cols=34 Identities=21% Similarity=0.220 Sum_probs=28.0
Q ss_pred chHHHHHHHHHhc-----CCCeEEEEEecccHHHHHHhh
Q 025842 109 VDAKSVIAALKSK-----GVSAIGAAGFCWGGVVAAKLA 142 (247)
Q Consensus 109 ~d~~~~i~~l~~~-----~~~~i~l~G~S~Gg~~a~~~a 142 (247)
..+..-|+|.+.. +++|+-++|-|.|=.++...+
T Consensus 22 ~nV~~QI~y~k~~gp~~ngPKkVLviGaSsGyGLa~RIs 60 (398)
T COG3007 22 ANVLQQIDYVKAAGPIKNGPKKVLVIGASSGYGLAARIS 60 (398)
T ss_pred HHHHHHHHHHHhcCCccCCCceEEEEecCCcccHHHHHH
Confidence 4577788888875 578999999999988888865
No 422
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=22.44 E-value=4.5e+02 Score=21.77 Aligned_cols=96 Identities=15% Similarity=0.117 Sum_probs=51.2
Q ss_pred EEEcCccCCCcchHHHHHHHHHhcCcEEEEeccC-CCCCccCCCCcccchHHHHhhcCCccccchHHHHHHHHHhcCCCe
Q 025842 47 LLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSKGVSA 125 (247)
Q Consensus 47 v~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~ 125 (247)
|++-||.|.- -...+..|.+.||.|+++|-. .|... .. .|....-.+..+.|-..+-+.+.+...+-
T Consensus 3 iLVtGGAGYI---GSHtv~~Ll~~G~~vvV~DNL~~g~~~--~v-------~~~~~~f~~gDi~D~~~L~~vf~~~~ida 70 (329)
T COG1087 3 VLVTGGAGYI---GSHTVRQLLKTGHEVVVLDNLSNGHKI--AL-------LKLQFKFYEGDLLDRALLTAVFEENKIDA 70 (329)
T ss_pred EEEecCcchh---HHHHHHHHHHCCCeEEEEecCCCCCHH--Hh-------hhccCceEEeccccHHHHHHHHHhcCCCE
Confidence 5666677632 135678888999999999986 44432 00 11101112223344444444444443332
Q ss_pred ------EEEEEecc-----------cHHHHHH-hhcCCCccEEEEec
Q 025842 126 ------IGAAGFCW-----------GGVVAAK-LASSHDIQAAVVLH 154 (247)
Q Consensus 126 ------i~l~G~S~-----------Gg~~a~~-~a~~~~i~~~v~~~ 154 (247)
...+|-|+ +|.+.+. ++.+..++.+|..|
T Consensus 71 ViHFAa~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSS 117 (329)
T COG1087 71 VVHFAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSS 117 (329)
T ss_pred EEECccccccchhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEec
Confidence 23455554 4555555 44556788777655
No 423
>PRK13256 thiopurine S-methyltransferase; Reviewed
Probab=22.42 E-value=70 Score=24.93 Aligned_cols=16 Identities=13% Similarity=0.098 Sum_probs=14.5
Q ss_pred HHHHHhcCcEEEEecc
Q 025842 64 ADKVAGAGFLVVAPDF 79 (247)
Q Consensus 64 a~~la~~G~~v~~~d~ 79 (247)
+..||++||.|+.+|+
T Consensus 58 ~~~LA~~G~~V~GvDl 73 (226)
T PRK13256 58 MLFFLSKGVKVIGIEL 73 (226)
T ss_pred HHHHHhCCCcEEEEec
Confidence 4688899999999999
No 424
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=22.35 E-value=1.9e+02 Score=23.73 Aligned_cols=32 Identities=19% Similarity=0.159 Sum_probs=23.8
Q ss_pred EEEEcCccCCCcchHHHHHHHHHhcCcEEEEeccC
Q 025842 46 ILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF 80 (247)
Q Consensus 46 vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~~ 80 (247)
.+++-|+.|.- -..+++.|.++|+.|+..+.+
T Consensus 8 ~vlVTGatGfi---G~~l~~~L~~~G~~V~~~~r~ 39 (340)
T PLN02653 8 VALITGITGQD---GSYLTEFLLSKGYEVHGIIRR 39 (340)
T ss_pred EEEEECCCCcc---HHHHHHHHHHCCCEEEEEecc
Confidence 46777666643 256889999999999988753
No 425
>PF04244 DPRP: Deoxyribodipyrimidine photo-lyase-related protein; InterPro: IPR007357 This family appears to be related to DNA photolyases.; PDB: 3ZXS_A.
Probab=22.34 E-value=3.1e+02 Score=21.34 Aligned_cols=21 Identities=29% Similarity=0.477 Sum_probs=15.8
Q ss_pred hHHHHHHHHHhcCcEEEEecc
Q 025842 59 LFRKLADKVAGAGFLVVAPDF 79 (247)
Q Consensus 59 ~~~~~a~~la~~G~~v~~~d~ 79 (247)
.++.+++.|.++||.|....+
T Consensus 50 aMRhfa~~L~~~G~~V~Y~~~ 70 (224)
T PF04244_consen 50 AMRHFADELRAKGFRVHYIEL 70 (224)
T ss_dssp HHHHHHHHHHHTT--EEEE-T
T ss_pred HHHHHHHHHHhCCCEEEEEeC
Confidence 468888999999999999998
No 426
>PRK06194 hypothetical protein; Provisional
Probab=22.18 E-value=1.2e+02 Score=24.11 Aligned_cols=31 Identities=19% Similarity=0.145 Sum_probs=22.4
Q ss_pred EEEEcCccCCCcchHHHHHHHHHhcCcEEEEecc
Q 025842 46 ILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDF 79 (247)
Q Consensus 46 vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~ 79 (247)
.+++.|+.|. --..+++.|+++|+.|++.+.
T Consensus 8 ~vlVtGasgg---IG~~la~~l~~~G~~V~~~~r 38 (287)
T PRK06194 8 VAVITGAASG---FGLAFARIGAALGMKLVLADV 38 (287)
T ss_pred EEEEeCCccH---HHHHHHHHHHHCCCEEEEEeC
Confidence 4566655543 225688999999999998875
No 427
>TIGR01305 GMP_reduct_1 guanosine monophosphate reductase, eukaryotic. A deep split separates two families of GMP reductase. This family includes both eukaryotic and some proteobacterial sequences, while the other family contains other bacterial sequences.
Probab=22.15 E-value=3.2e+02 Score=22.88 Aligned_cols=47 Identities=11% Similarity=-0.014 Sum_probs=31.6
Q ss_pred HHHHHHHHhc--CcEEEEeccCCCCCccCCCCcccchHHHHhhcCCccccchHHHHHHHHHhcCCCeEEEEEe
Q 025842 61 RKLADKVAGA--GFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSKGVSAIGAAGF 131 (247)
Q Consensus 61 ~~~a~~la~~--G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~ 131 (247)
...++.|.+. |..++++|.-||.+. .+.+.++++++.-++...+.|-
T Consensus 109 ~er~~~L~~a~~~~d~iviD~AhGhs~------------------------~~i~~ik~ir~~~p~~~viaGN 157 (343)
T TIGR01305 109 LEKMTSILEAVPQLKFICLDVANGYSE------------------------HFVEFVKLVREAFPEHTIMAGN 157 (343)
T ss_pred HHHHHHHHhcCCCCCEEEEECCCCcHH------------------------HHHHHHHHHHhhCCCCeEEEec
Confidence 3555666665 599999998777653 3456677777764556666663
No 428
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=22.14 E-value=5.1e+02 Score=22.30 Aligned_cols=132 Identities=14% Similarity=0.102 Sum_probs=65.6
Q ss_pred EEEEcCccCCCcchHHHHHHHHHhcCcEEEEeccC-CCCCccCCCCcccchH--------HHHhhcCC-ccccchHHHHH
Q 025842 46 ILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGDPIVDLNNPQFDRE--------AWRKIHNT-DKGYVDAKSVI 115 (247)
Q Consensus 46 vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~~-~g~~~~~~~~~~~~~~--------~~~~~~~~-~~~~~d~~~~i 115 (247)
|+++- -+..-...+..+.+.+.++|..|+.+|.- .+.+...++-...... ......+. +........+.
T Consensus 4 I~iig-T~DTK~~E~~yl~~~i~~~G~~v~~iDvg~~~~~~~~~di~~~eVa~~~g~~~~~~~~~~dRg~ai~~M~~ga~ 82 (403)
T PF06792_consen 4 IAIIG-TLDTKGEELLYLRDQIEAQGVEVLLIDVGTLGEPSFPPDISREEVARAAGDSIEAVRSSGDRGEAIEAMARGAA 82 (403)
T ss_pred EEEEE-ccCCCHHHHHHHHHHHHHCCCcEEEEEcCCCCCCCCCCCcCHHHHHHhcCCChHHhhccCCHHHHHHHHHHHHH
Confidence 44443 45444455667778888899999999985 3433311111111110 00000000 00111223333
Q ss_pred HHHHhc----CCCeEEEEEecccHHHHHHhhcC-C--CccEEEEecCCCCCccccccccccEEEeecCCCCC
Q 025842 116 AALKSK----GVSAIGAAGFCWGGVVAAKLASS-H--DIQAAVVLHPGAITVDDINEIKVPVAILGAEIDHV 180 (247)
Q Consensus 116 ~~l~~~----~~~~i~l~G~S~Gg~~a~~~a~~-~--~i~~~v~~~~~~~~~~~~~~~~~P~l~i~g~~D~~ 180 (247)
+++.++ ..+-|+-+|-|.|..++..+.+. | -.|-+|+.-++......+. ..-+.+++.--|-.
T Consensus 83 ~~v~~l~~~g~i~Gvi~~GGs~GT~lat~aMr~LPiG~PKlmVST~ASGd~~~yvg--~sDI~mm~SVvDia 152 (403)
T PF06792_consen 83 RFVSDLYDEGKIDGVIGIGGSGGTALATAAMRALPIGFPKLMVSTMASGDTSPYVG--ESDITMMYSVVDIA 152 (403)
T ss_pred HHHHHHHhcCCccEEEEecCCccHHHHHHHHHhCCCCCCeEEEEccCCCCcccccC--cCCEEEeeeccccc
Confidence 344433 23577788889999999887753 3 3444454444333333332 23355555555543
No 429
>PLN02173 UDP-glucosyl transferase family protein
Probab=22.12 E-value=1.6e+02 Score=25.64 Aligned_cols=38 Identities=11% Similarity=0.148 Sum_probs=26.9
Q ss_pred CCeEEEEEcCccC-CCcchHHHHHHHHHhcCcEEEEeccC
Q 025842 42 SKSAILLISDVFG-YEAPLFRKLADKVAGAGFLVVAPDFF 80 (247)
Q Consensus 42 ~~~~vv~~hgg~g-~~~~~~~~~a~~la~~G~~v~~~d~~ 80 (247)
+++.||+++ ..+ ++-.-+.++|+.|+++|+.|..+...
T Consensus 4 ~~~hvv~~P-~paqGHi~P~l~lAk~La~~G~~vT~v~t~ 42 (449)
T PLN02173 4 MRGHVLAVP-FPSQGHITPIRQFCKRLHSKGFKTTHTLTT 42 (449)
T ss_pred CCcEEEEec-CcccccHHHHHHHHHHHHcCCCEEEEEECC
Confidence 346788888 554 33444678999999999988766553
No 430
>cd02117 NifH_like This family contains the NifH (iron protein) of nitrogenase, L subunit (BchL/ChlL) of the protochlorophyllide reductase and the BchX subunit of the Chlorophyllide reductase. Members of this family use energey from ATP hydrolysis and transfer electrons through a Fe4-S4 cluster to other subunit for reduction of substrate.
Probab=22.11 E-value=74 Score=24.17 Aligned_cols=21 Identities=19% Similarity=0.094 Sum_probs=18.5
Q ss_pred HHHHHHHHHhcCcEEEEeccC
Q 025842 60 FRKLADKVAGAGFLVVAPDFF 80 (247)
Q Consensus 60 ~~~~a~~la~~G~~v~~~d~~ 80 (247)
-..+|..|+++|+.|+++|.-
T Consensus 17 ~~nLA~~la~~G~rvLliD~D 37 (212)
T cd02117 17 SQNLSAALAEMGKKVLQVGCD 37 (212)
T ss_pred HHHHHHHHHHCCCcEEEEeCC
Confidence 457899999999999999984
No 431
>PRK10673 acyl-CoA esterase; Provisional
Probab=22.09 E-value=3.6e+02 Score=20.52 Aligned_cols=63 Identities=16% Similarity=0.202 Sum_probs=37.5
Q ss_pred ccccEEEeecCCCCCCCHHHHHHHHHHHHhccCCCeeEEEeCCCCccccccCCCCChHHHHHHHHHHHHHHHHHHH
Q 025842 166 IKVPVAILGAEIDHVSPPEDLKRFGEILSAKLKNDCLVKIYPRVSHGWTVRYNVEDEFAVKSAEEAHEDMINWLTK 241 (247)
Q Consensus 166 ~~~P~l~i~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~ 241 (247)
-..|++++||..+.. .....+.+.+.+ ..+++.++--||+........ ..++..+.+.++++.
T Consensus 15 ~~~~iv~lhG~~~~~---~~~~~~~~~l~~----~~~vi~~D~~G~G~s~~~~~~------~~~~~~~d~~~~l~~ 77 (255)
T PRK10673 15 NNSPIVLVHGLFGSL---DNLGVLARDLVN----DHDIIQVDMRNHGLSPRDPVM------NYPAMAQDLLDTLDA 77 (255)
T ss_pred CCCCEEEECCCCCch---hHHHHHHHHHhh----CCeEEEECCCCCCCCCCCCCC------CHHHHHHHHHHHHHH
Confidence 357899999976542 334455566632 457777777788765432211 234556667776654
No 432
>PRK13236 nitrogenase reductase; Reviewed
Probab=21.94 E-value=76 Score=25.75 Aligned_cols=21 Identities=10% Similarity=-0.034 Sum_probs=18.4
Q ss_pred HHHHHHHHHhcCcEEEEeccC
Q 025842 60 FRKLADKVAGAGFLVVAPDFF 80 (247)
Q Consensus 60 ~~~~a~~la~~G~~v~~~d~~ 80 (247)
-..+|..|+++|+.|+.+|.=
T Consensus 23 a~NLA~~La~~G~rVLliD~D 43 (296)
T PRK13236 23 SQNTLAAMAEMGQRILIVGCD 43 (296)
T ss_pred HHHHHHHHHHCCCcEEEEEcc
Confidence 357889999999999999985
No 433
>TIGR02964 xanthine_xdhC xanthine dehydrogenase accessory protein XdhC. Members of this protein family are the accessory protein XdhC for insertion of the molybdenum cofactor into the xanthine dehydrogenase large chain, XdhB, in bacteria. This protein is not part of the mature xanthine dehydrogenase. Xanthine dehydrogenase is an enzyme for purine catabolism, from other purines to xanthine to urate to further breakdown products.
Probab=21.93 E-value=2e+02 Score=22.71 Aligned_cols=34 Identities=21% Similarity=0.129 Sum_probs=22.6
Q ss_pred CCeEEEEEcCccCCCcchHHHHHHHHHhcCcEEEEeccC
Q 025842 42 SKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFF 80 (247)
Q Consensus 42 ~~~~vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~~ 80 (247)
+.|.++++-+ | ..-+.+++.....||.|.++|-|
T Consensus 99 p~~~L~IfGa--G---~va~~la~la~~lGf~V~v~D~R 132 (246)
T TIGR02964 99 PAPHVVLFGA--G---HVGRALVRALAPLPCRVTWVDSR 132 (246)
T ss_pred CCCEEEEECC--c---HHHHHHHHHHhcCCCEEEEEeCC
Confidence 4455555542 2 23356777777789999999986
No 434
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=21.75 E-value=1.2e+02 Score=24.99 Aligned_cols=34 Identities=24% Similarity=0.142 Sum_probs=25.2
Q ss_pred EEEEcCccCCCcchHHHHHHHHHhcCcEEEEecc
Q 025842 46 ILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDF 79 (247)
Q Consensus 46 vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~ 79 (247)
|+++-++.|++......+++.|.++|+.|..+-.
T Consensus 4 i~i~~~g~gG~~~~~~~la~~L~~~g~ev~vv~~ 37 (357)
T PRK00726 4 ILLAGGGTGGHVFPALALAEELKKRGWEVLYLGT 37 (357)
T ss_pred EEEEcCcchHhhhHHHHHHHHHHhCCCEEEEEEC
Confidence 5666556666555556899999999999988765
No 435
>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=21.64 E-value=1.9e+02 Score=25.42 Aligned_cols=38 Identities=11% Similarity=0.047 Sum_probs=28.3
Q ss_pred CCeEEEEEcCccC-CCcchHHHHHHHHHhcCcEEEEeccC
Q 025842 42 SKSAILLISDVFG-YEAPLFRKLADKVAGAGFLVVAPDFF 80 (247)
Q Consensus 42 ~~~~vv~~hgg~g-~~~~~~~~~a~~la~~G~~v~~~d~~ 80 (247)
.++.||+++ ..+ ++..-+.++++.|+.+|+.|..+...
T Consensus 8 ~~~HVvl~P-fpaqGHi~P~l~LAk~La~~G~~VTfv~T~ 46 (477)
T PLN02863 8 AGTHVLVFP-FPAQGHMIPLLDLTHRLALRGLTITVLVTP 46 (477)
T ss_pred CCCEEEEec-CcccchHHHHHHHHHHHHhCCCEEEEEeCC
Confidence 457788888 554 33344678999999999998887765
No 436
>TIGR01968 minD_bact septum site-determining protein MinD. This model describes the bacterial and chloroplast form of MinD, a multifunctional cell division protein that guides correct placement of the septum. The homologous archaeal MinD proteins, with many archaeal genomes having two or more forms, are described by a separate model.
Probab=21.61 E-value=1.3e+02 Score=23.38 Aligned_cols=21 Identities=29% Similarity=0.101 Sum_probs=18.1
Q ss_pred HHHHHHHHHhcCcEEEEeccC
Q 025842 60 FRKLADKVAGAGFLVVAPDFF 80 (247)
Q Consensus 60 ~~~~a~~la~~G~~v~~~d~~ 80 (247)
-..+|..|+++|+.|+.+|.-
T Consensus 19 a~~lA~~la~~g~~vlliD~D 39 (261)
T TIGR01968 19 TANLGTALARLGKKVVLIDAD 39 (261)
T ss_pred HHHHHHHHHHcCCeEEEEECC
Confidence 457888999999999999984
No 437
>TIGR03566 FMN_reduc_MsuE FMN reductase, MsuE subfamily. Members of this protein family use NAD(P)H to reduce FMN and regenerate FMNH2. Members include the NADH-dependent enzyme MsuE from Pseudomonas aeruginosa, which serves as a partner to an FMNH2-dependent alkanesulfonate monooxygenase. The NADP-dependent enzyme from E. coli is outside the scope of this model.
Probab=21.61 E-value=2.4e+02 Score=20.60 Aligned_cols=23 Identities=13% Similarity=0.247 Sum_probs=14.9
Q ss_pred chHHHHHHHHHh-cCcEEEEeccC
Q 025842 58 PLFRKLADKVAG-AGFLVVAPDFF 80 (247)
Q Consensus 58 ~~~~~~a~~la~-~G~~v~~~d~~ 80 (247)
..+..+.+.+.+ .|+.+.+|.|.
T Consensus 57 ~~~~~~~~~i~~AD~iIi~tP~Y~ 80 (174)
T TIGR03566 57 PDAERILQAIESADLLVVGSPVYR 80 (174)
T ss_pred HHHHHHHHHHHHCCEEEEECCcCc
Confidence 345556666654 47888888883
No 438
>PLN02752 [acyl-carrier protein] S-malonyltransferase
Probab=21.57 E-value=1.1e+02 Score=25.39 Aligned_cols=17 Identities=29% Similarity=0.327 Sum_probs=14.6
Q ss_pred EEEEecccHHHHHHhhc
Q 025842 127 GAAGFCWGGVVAAKLAS 143 (247)
Q Consensus 127 ~l~G~S~Gg~~a~~~a~ 143 (247)
.++|||+|=+.|+.++.
T Consensus 127 ~~~GHSlGE~aA~~~AG 143 (343)
T PLN02752 127 VCAGLSLGEYTALVFAG 143 (343)
T ss_pred eeeeccHHHHHHHHHhC
Confidence 68999999999888773
No 439
>cd08193 HVD 5-hydroxyvalerate dehydrogenase (HVD) catalyzes the oxidation of 5-hydroxyvalerate to 5-oxovalerate with NAD+ as cofactor. 5-hydroxyvalerate dehydrogenase (HVD) is an iron-containing (type III) NAD-dependent alcohol dehydrogenase. It plays a role in the cyclopentanol metabolism biochemical pathway. It catalyzes the oxidation of 5-hydroxyvalerate to 5-oxovalerate with NAD+ as cofactor. This cyclopentanol (cpn) degradation pathway is present in some bacteria which can use cyclopentanol as sole carbon source. In Comamonas sp. strain NCIMB 9872, this enzyme is encoded by the CpnD gene.
Probab=21.52 E-value=4.9e+02 Score=21.88 Aligned_cols=64 Identities=22% Similarity=0.250 Sum_probs=37.2
Q ss_pred EEEEEcCccCCCcchHHHHHHHHHhcCcEEEEeccCCCCCccCCCCcccchHHHHhhcCCccccchHHHHHHHHHhcCCC
Q 025842 45 AILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSKGVS 124 (247)
Q Consensus 45 ~vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~ 124 (247)
.++++.+..-.....+..+...|.+.|..+..++-..+.+. .+.+..+++.+++.+.+
T Consensus 28 ~~livt~~~~~~~~~~~~v~~~L~~~~~~~~~~~~v~~~p~----------------------~~~v~~~~~~~~~~~~D 85 (376)
T cd08193 28 RVLVVTDPGILKAGLIDPLLASLEAAGIEVTVFDDVEADPP----------------------EAVVEAAVEAARAAGAD 85 (376)
T ss_pred eEEEEcCcchhhCccHHHHHHHHHHcCCeEEEECCCCCCcC----------------------HHHHHHHHHHHHhcCCC
Confidence 35555533211223456777788888887776654212211 16677888888877666
Q ss_pred eEEEEE
Q 025842 125 AIGAAG 130 (247)
Q Consensus 125 ~i~l~G 130 (247)
-|+-+|
T Consensus 86 ~IIaiG 91 (376)
T cd08193 86 GVIGFG 91 (376)
T ss_pred EEEEeC
Confidence 666444
No 440
>PF10686 DUF2493: Protein of unknown function (DUF2493); InterPro: IPR019627 This entry is represented by Mycobacteriophage D29, Gp61. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. Members of this family are mainly Proteobacteria. The function is not known.
Probab=21.33 E-value=1.5e+02 Score=18.22 Aligned_cols=33 Identities=15% Similarity=0.103 Sum_probs=19.4
Q ss_pred CeEEEEEcCccCCCcchHHHHHHHHHh-cCcEEEEec
Q 025842 43 KSAILLISDVFGYEAPLFRKLADKVAG-AGFLVVAPD 78 (247)
Q Consensus 43 ~~~vv~~hgg~g~~~~~~~~~a~~la~-~G~~v~~~d 78 (247)
.|.++++||+... ....+|...|+ +|+.++.+-
T Consensus 31 ~~~~~lvhGga~~---GaD~iA~~wA~~~gv~~~~~~ 64 (71)
T PF10686_consen 31 HPDMVLVHGGAPK---GADRIAARWARERGVPVIRFP 64 (71)
T ss_pred CCCEEEEECCCCC---CHHHHHHHHHHHCCCeeEEeC
Confidence 4678888966522 12345666654 577666543
No 441
>cd07219 Pat_PNPLA1 Patatin-like phospholipase domain containing protein 1. Members of this family share a patatin domain, initially discovered in potato tubers. Some members of PNPLA1 subfamily do not have the lipase consensus sequence Gly-X-Ser-X-Gly which is essential for hydrolase activity. This family includes PNPLA1 from Homo sapiens and Gallus gallus. Currently, there is no literature available on the physiological role, structure, or enzymatic activity of PNPLA1. It is expressed in various human tissues in low mRNA levels.
Probab=21.25 E-value=1.1e+02 Score=25.87 Aligned_cols=32 Identities=31% Similarity=0.353 Sum_probs=21.7
Q ss_pred HHHHHHHhcCCC----eEEEEEecccHHHHHHhhcC
Q 025842 113 SVIAALKSKGVS----AIGAAGFCWGGVVAAKLASS 144 (247)
Q Consensus 113 ~~i~~l~~~~~~----~i~l~G~S~Gg~~a~~~a~~ 144 (247)
-+++.|.+.+.+ --.++|-|.|+.++..++..
T Consensus 29 GVl~aL~E~gp~ll~~~d~IaGtSAGALvAAl~asG 64 (382)
T cd07219 29 GVVDALRDLAPRMLETAHRVAGTSAGSVIAALVVCG 64 (382)
T ss_pred HHHHHHHhcCCcccccCCeEEEEcHHHHHHHHHHhC
Confidence 445556555432 22488999999999987744
No 442
>PRK06924 short chain dehydrogenase; Provisional
Probab=21.23 E-value=1.7e+02 Score=22.54 Aligned_cols=31 Identities=16% Similarity=0.148 Sum_probs=21.9
Q ss_pred EEEEcCccCCCcchHHHHHHHHHhcCcEEEEecc
Q 025842 46 ILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDF 79 (247)
Q Consensus 46 vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~ 79 (247)
.+++.|+.|. .-+.+++.|+++|+.|+..+.
T Consensus 3 ~vlItGasgg---iG~~ia~~l~~~g~~V~~~~r 33 (251)
T PRK06924 3 YVIITGTSQG---LGEAIANQLLEKGTHVISISR 33 (251)
T ss_pred EEEEecCCch---HHHHHHHHHHhcCCEEEEEeC
Confidence 3455544442 336789999999999998875
No 443
>PF09587 PGA_cap: Bacterial capsule synthesis protein PGA_cap; InterPro: IPR019079 CapA is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein [].
Probab=21.07 E-value=2.5e+02 Score=22.03 Aligned_cols=38 Identities=21% Similarity=0.207 Sum_probs=25.6
Q ss_pred CeEEEEEcCccC---CCcchHHHHHHHHHhcCcEEEEeccC
Q 025842 43 KSAILLISDVFG---YEAPLFRKLADKVAGAGFLVVAPDFF 80 (247)
Q Consensus 43 ~~~vv~~hgg~g---~~~~~~~~~a~~la~~G~~v~~~d~~ 80 (247)
.-.||++|.|.. ......+.+++.|.+.|..++.-..+
T Consensus 185 D~vIv~~HwG~e~~~~p~~~q~~~a~~lidaGaDiIiG~Hp 225 (250)
T PF09587_consen 185 DVVIVSLHWGIEYENYPTPEQRELARALIDAGADIIIGHHP 225 (250)
T ss_pred CEEEEEeccCCCCCCCCCHHHHHHHHHHHHcCCCEEEeCCC
Confidence 456666773322 12345578889999999888887775
No 444
>cd08190 HOT Hydroxyacid-oxoacid transhydrogenase (HOT) involved in gamma-hydroxybutyrate metabolism. Hydroxyacid-oxoacid transhydrogenase (HOT), also known as D-2-hydroxyglutarate transhydrogenase. It catalyzes the conversion of gamma-hydroxybutyrate (GHB) to succinic semialdehyde (SSA), coupled to the stoichiometric conversion of alpha-ketoglutarate to D-2-hydroxyglutarate in gamma-Hydroxybutyrate catabolism. Unlike many other alcohols, which are oxidized by NAD-linked dehydrogenases, gamma-hydroxybutyrate is metabolized to succinate semialdehyde by hydroxyacid-oxoacid transhydrogenase which does not require free NAD or NADP, but instead using alpha -ketoglutarate as an acceptor, converting it to d-2-hydroxyglutarate. Alpha-ketoglutarate serves as an intermediate acceptor to regenerate NAD(P) required for the oxidation of GHB. HOT also catalyzes the reversible oxidation of a hydroxyacid obligatorily coupled to the reduction of an oxoacid, and requires no cofactor. In mammals, the HOT
Probab=21.03 E-value=4.9e+02 Score=22.33 Aligned_cols=64 Identities=23% Similarity=0.188 Sum_probs=37.2
Q ss_pred EEEEEcCccCCCcchHHHHHHHHHhcCcEEEEeccCCCCCccCCCCcccchHHHHhhcCCccccchHHHHHHHHHhcCCC
Q 025842 45 AILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSKGVS 124 (247)
Q Consensus 45 ~vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~ 124 (247)
.++++.+..-.....+..+.+.|.+.|..+..++-....+. .+.+..+++.+++.+.+
T Consensus 25 ~vlivt~~~~~~~g~~~~v~~~L~~~gi~~~~f~~v~~~p~----------------------~~~v~~~~~~~~~~~~D 82 (414)
T cd08190 25 RVCLVTDPNLAQLPPVKVVLDSLEAAGINFEVYDDVRVEPT----------------------DESFKDAIAFAKKGQFD 82 (414)
T ss_pred eEEEEECcchhhcchHHHHHHHHHHcCCcEEEeCCCCCCcC----------------------HHHHHHHHHHHHhcCCC
Confidence 35555533222223456777788788888877764211111 15677888888887666
Q ss_pred eEEEEE
Q 025842 125 AIGAAG 130 (247)
Q Consensus 125 ~i~l~G 130 (247)
-|+-+|
T Consensus 83 ~IIaiG 88 (414)
T cd08190 83 AFVAVG 88 (414)
T ss_pred EEEEeC
Confidence 655444
No 445
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=20.96 E-value=1.2e+02 Score=27.25 Aligned_cols=23 Identities=13% Similarity=-0.022 Sum_probs=19.7
Q ss_pred hcCCCeEEEEEecccHHHHHHhh
Q 025842 120 SKGVSAIGAAGFCWGGVVAAKLA 142 (247)
Q Consensus 120 ~~~~~~i~l~G~S~Gg~~a~~~a 142 (247)
..+..+-+++|||+|=+.++.+|
T Consensus 261 ~~GI~Pdav~GHSlGE~aAa~aA 283 (538)
T TIGR02816 261 EFAIKPDFALGYSKGEASMWASL 283 (538)
T ss_pred hcCCCCCEEeecCHHHHHHHHHh
Confidence 45777889999999999988877
No 446
>PF14714 KH_dom-like: KH-domain-like of EngA bacterial GTPase enzymes, C-terminal; PDB: 2HJG_A 1MKY_A.
Probab=20.88 E-value=2.3e+02 Score=17.85 Aligned_cols=30 Identities=13% Similarity=0.120 Sum_probs=20.8
Q ss_pred cccccEEEeecCCCCCCCHHHHHHHHHHHH
Q 025842 165 EIKVPVAILGAEIDHVSPPEDLKRFGEILS 194 (247)
Q Consensus 165 ~~~~P~l~i~g~~D~~~~~~~~~~~~~~l~ 194 (247)
...+|++++++.+...++..-.+-+.+.+.
T Consensus 36 ~~~PPtFv~f~N~~~~~~~sY~ryL~n~lR 65 (80)
T PF14714_consen 36 GTRPPTFVLFVNDPELLPESYKRYLENQLR 65 (80)
T ss_dssp ETTTTEEEEEES-CCC--HHHHHHHHHHHH
T ss_pred CCCCCEEEEEeCCcccCCHHHHHHHHHHHH
Confidence 356899999998778888777777777763
No 447
>PF03205 MobB: Molybdopterin guanine dinucleotide synthesis protein B; PDB: 2F1R_B 1P9N_A 1NP6_B 2NPI_A 1XJC_A.
Probab=20.83 E-value=2.7e+02 Score=19.65 Aligned_cols=41 Identities=17% Similarity=0.176 Sum_probs=22.4
Q ss_pred EEEEEcCccCCC-cchHHHHHHHHHhcCcEEEEe-ccCCCCCc
Q 025842 45 AILLISDVFGYE-APLFRKLADKVAGAGFLVVAP-DFFYGDPI 85 (247)
Q Consensus 45 ~vv~~hgg~g~~-~~~~~~~a~~la~~G~~v~~~-d~~~g~~~ 85 (247)
++|.+-|.-+.. ....+.+++.|.++||.|.++ +.-+|...
T Consensus 1 pvv~VvG~~~sGKTTl~~~Li~~l~~~g~~v~~ik~~~~g~~~ 43 (140)
T PF03205_consen 1 PVVQVVGPKNSGKTTLIRKLINELKRRGYRVAVIKHTDHGQFE 43 (140)
T ss_dssp -EEEEEESTTSSHHHHHHHHHHHHHHTT--EEEEEE-STTSTT
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHhHcCCceEEEEEccCCCcc
Confidence 355555433322 234577889999999999844 44355543
No 448
>TIGR02638 lactal_redase lactaldehyde reductase. This clade of genes encoding iron-containing alcohol dehydrogenase (pfam00465) proteins is generally found in apparent operons for the catabolism of rhamnose or fucose. Catabolism of both of these monosaccharides results in lactaldehyde which is reduced by this enzyme to 1,2 propanediol. This protein is alternatively known by the name 1,2 propanediol oxidoreductase. This enzyme is active under anaerobic conditions in E. coli while being inactivated by reactive oxygen species under aerobic conditions. Under aerobic conditions the lactaldehyde product of rhamnose and fucose catabolism is believed to be oxidized to lactate by a separate enzyme, lactaldehyde dehydrogenase.
Probab=20.71 E-value=5.2e+02 Score=21.82 Aligned_cols=64 Identities=23% Similarity=0.184 Sum_probs=36.6
Q ss_pred EEEEEcCccCCCcchHHHHHHHHHhcCcEEEEeccCCCCCccCCCCcccchHHHHhhcCCccccchHHHHHHHHHhcCCC
Q 025842 45 AILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSKGVS 124 (247)
Q Consensus 45 ~vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~ 124 (247)
.++++.+..-.....+..+...|.+.|..+..++-- .+. + ..+.+..+++.+++.+.+
T Consensus 31 r~lvvt~~~~~~~g~~~~v~~~L~~~~i~~~~~~~v--~~~--p------------------~~~~v~~~~~~~~~~~~D 88 (379)
T TIGR02638 31 KALVVTDKDLIKFGVADKVTDLLDEAGIAYELFDEV--KPN--P------------------TITVVKAGVAAFKASGAD 88 (379)
T ss_pred EEEEEcCcchhhccchHHHHHHHHHCCCeEEEECCC--CCC--c------------------CHHHHHHHHHHHHhcCCC
Confidence 455555332222234556777887788877766531 111 1 126677888888887766
Q ss_pred eEEEEE
Q 025842 125 AIGAAG 130 (247)
Q Consensus 125 ~i~l~G 130 (247)
-|+.+|
T Consensus 89 ~IiaiG 94 (379)
T TIGR02638 89 YLIAIG 94 (379)
T ss_pred EEEEeC
Confidence 666444
No 449
>cd01523 RHOD_Lact_B Member of the Rhodanese Homology Domain superfamily. This CD includes predicted proteins with rhodanese-like domains found N-terminal of the metallo-beta-lactamase domain.
Probab=20.59 E-value=2.5e+02 Score=18.01 Aligned_cols=14 Identities=29% Similarity=0.404 Sum_probs=11.0
Q ss_pred HHHHHHHHhcCcEE
Q 025842 61 RKLADKVAGAGFLV 74 (247)
Q Consensus 61 ~~~a~~la~~G~~v 74 (247)
...+..|.+.||.+
T Consensus 75 ~~aa~~L~~~G~~~ 88 (100)
T cd01523 75 QFVAELLAERGYDV 88 (100)
T ss_pred HHHHHHHHHcCcee
Confidence 45778888999983
No 450
>PF00289 CPSase_L_chain: Carbamoyl-phosphate synthase L chain, N-terminal domain; InterPro: IPR005481 Carbamoyl phosphate synthase (CPSase) is a heterodimeric enzyme composed of a small and a large subunit (with the exception of CPSase III, see below). CPSase catalyses the synthesis of carbamoyl phosphate from biocarbonate, ATP and glutamine (6.3.5.5 from EC) or ammonia (6.3.4.16 from EC), and represents the first committed step in pyrimidine and arginine biosynthesis in prokaryotes and eukaryotes, and in the urea cycle in most terrestrial vertebrates [, ]. CPSase has three active sites, one in the small subunit and two in the large subunit. The small subunit contains the glutamine binding site and catalyses the hydrolysis of glutamine to glutamate and ammonia. The large subunit has two homologous carboxy phosphate domains, both of which have ATP-binding sites; however, the N-terminal carboxy phosphate domain catalyses the phosphorylation of biocarbonate, while the C-terminal domain catalyses the phosphorylation of the carbamate intermediate []. The carboxy phosphate domain found duplicated in the large subunit of CPSase is also present as a single copy in the biotin-dependent enzymes acetyl-CoA carboxylase (6.4.1.2 from EC) (ACC), propionyl-CoA carboxylase (6.4.1.3 from EC) (PCCase), pyruvate carboxylase (6.4.1.1 from EC) (PC) and urea carboxylase (6.3.4.6 from EC). Most prokaryotes carry one form of CPSase that participates in both arginine and pyrimidine biosynthesis, however certain bacteria can have separate forms. The large subunit in bacterial CPSase has four structural domains: the carboxy phosphate domain 1, the oligomerisation domain, the carbamoyl phosphate domain 2 and the allosteric domain []. CPSase heterodimers from Escherichia coli contain two molecular tunnels: an ammonia tunnel and a carbamate tunnel. These inter-domain tunnels connect the three distinct active sites, and function as conduits for the transport of unstable reaction intermediates (ammonia and carbamate) between successive active sites []. The catalytic mechanism of CPSase involves the diffusion of carbamate through the interior of the enzyme from the site of synthesis within the N-terminal domain of the large subunit to the site of phosphorylation within the C-terminal domain. Eukaryotes have two distinct forms of CPSase: a mitochondrial enzyme (CPSase I) that participates in both arginine biosynthesis and the urea cycle; and a cytosolic enzyme (CPSase II) involved in pyrimidine biosynthesis. CPSase II occurs as part of a multi-enzyme complex along with aspartate transcarbamoylase and dihydroorotase; this complex is referred to as the CAD protein []. The hepatic expression of CPSase is transcriptionally regulated by glucocorticoids and/or cAMP []. There is a third form of the enzyme, CPSase III, found in fish, which uses glutamine as a nitrogen source instead of ammonia []. CPSase III is closely related to CPSase I, and is composed of a single polypeptide that may have arisen from gene fusion of the glutaminase and synthetase domains []. This entry represents the N-terminal domain of the large subunit of carbamoyl phosphate synthase. This domain can also be found in certain other related proteins. ; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 3VA7_A 3OUU_A 3OUZ_B 1W96_B 1W93_A 1ULZ_A 3HB9_C 3HO8_A 3BG5_C 3HBL_A ....
Probab=20.47 E-value=93 Score=21.04 Aligned_cols=32 Identities=19% Similarity=0.391 Sum_probs=18.4
Q ss_pred EEEEEcCccCCCcchHHHHHHHHHhcCcEEEEe
Q 025842 45 AILLISDVFGYEAPLFRKLADKVAGAGFLVVAP 77 (247)
Q Consensus 45 ~vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~ 77 (247)
.+..+|+|+|.-+++ ..+++.+.+.|...+-|
T Consensus 74 g~~~i~pGyg~lse~-~~fa~~~~~~gi~fiGp 105 (110)
T PF00289_consen 74 GADAIHPGYGFLSEN-AEFAEACEDAGIIFIGP 105 (110)
T ss_dssp TESEEESTSSTTTTH-HHHHHHHHHTT-EESSS
T ss_pred cCcccccccchhHHH-HHHHHHHHHCCCEEECc
Confidence 455666677765443 35666666667666544
No 451
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=20.40 E-value=4.6e+02 Score=22.53 Aligned_cols=75 Identities=17% Similarity=0.046 Sum_probs=43.6
Q ss_pred chHHHHHHHHHh-----cCcEEEEeccCCCCCccCCCCcccchHHHHhhcCCccccchHHHHHHHHHhc-CCCeEEEEEe
Q 025842 58 PLFRKLADKVAG-----AGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSK-GVSAIGAAGF 131 (247)
Q Consensus 58 ~~~~~~a~~la~-----~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~-~~~~i~l~G~ 131 (247)
++|..+.+.++. .|..++++.|. |.....|......+. ....++.+.+++|... +...+-+---
T Consensus 199 edw~~Wi~al~~a~lla~g~~~va~TY~-G~~~t~p~Y~~g~mG---------~AKa~LE~~~r~La~~L~~~giran~i 268 (398)
T PRK13656 199 EDWELWIDALDEAGVLAEGAKTVAYSYI-GPELTHPIYWDGTIG---------KAKKDLDRTALALNEKLAAKGGDAYVS 268 (398)
T ss_pred chHHHHHHHHHhcccccCCcEEEEEecC-CcceeecccCCchHH---------HHHHHHHHHHHHHHHHhhhcCCEEEEE
Confidence 355555555543 48999999994 543312333222222 2236788888888765 4445555666
Q ss_pred cccHHHHHHhh
Q 025842 132 CWGGVVAAKLA 142 (247)
Q Consensus 132 S~Gg~~a~~~a 142 (247)
|.|...+...+
T Consensus 269 ~~g~~~T~Ass 279 (398)
T PRK13656 269 VLKAVVTQASS 279 (398)
T ss_pred ecCcccchhhh
Confidence 77777666543
No 452
>PF04263 TPK_catalytic: Thiamin pyrophosphokinase, catalytic domain; InterPro: IPR007371 Thiamin pyrophosphokinase (TPK, 2.7.6.2 from EC) catalyzes the transfer of a pyrophosphate group from ATP to vitamin B1 (thiamin) to form the coenzyme thiamin pyrophosphate (TPP). Thus, TPK is important for the formation of a coenzyme required for central metabolic functions. The structure of thiamin pyrophosphokinase suggests that the enzyme may operate by a mechanism of pyrophosphoryl transfer similar to those described for pyrophosphokinases functioning in nucleotide biosynthesis [].; GO: 0004788 thiamine diphosphokinase activity, 0005524 ATP binding, 0009229 thiamine diphosphate biosynthetic process; PDB: 2F17_B 1IG3_B 3S4Y_B 2OMK_B 1IG0_A 3MEL_B 3CQ9_A 3LM8_B 3K94_B 3L8M_B ....
Probab=20.35 E-value=1.5e+02 Score=20.48 Aligned_cols=32 Identities=25% Similarity=0.409 Sum_probs=24.9
Q ss_pred ccccchHHHHHHHHHhcCCCeEEEEEecccHHH
Q 025842 105 DKGYVDAKSVIAALKSKGVSAIGAAGFCWGGVV 137 (247)
Q Consensus 105 ~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~ 137 (247)
++...|...+++++.+.+..+|.++| .+||.+
T Consensus 67 ~kD~TD~e~Al~~~~~~~~~~i~v~G-a~GgR~ 98 (123)
T PF04263_consen 67 EKDYTDLEKALEYAIEQGPDEIIVLG-ALGGRF 98 (123)
T ss_dssp STTS-HHHHHHHHHHHTTTSEEEEES--SSSSH
T ss_pred ccccCHHHHHHHHHHHCCCCEEEEEe-cCCCcH
Confidence 55668999999999888889999999 456655
No 453
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=20.33 E-value=3.1e+02 Score=25.02 Aligned_cols=40 Identities=23% Similarity=0.150 Sum_probs=28.6
Q ss_pred CCCeEEEEEcCccCCCc--chHHHHHHHHHhcCcEEEEeccC
Q 025842 41 DSKSAILLISDVFGYEA--PLFRKLADKVAGAGFLVVAPDFF 80 (247)
Q Consensus 41 ~~~~~vv~~hgg~g~~~--~~~~~~a~~la~~G~~v~~~d~~ 80 (247)
.-+.|+|++||...... +....+.+.|..+|..|-..-++
T Consensus 549 ~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p 590 (620)
T COG1506 549 NIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFP 590 (620)
T ss_pred ccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeC
Confidence 34678999997665332 23456778888889888887775
No 454
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=20.20 E-value=2.3e+02 Score=23.67 Aligned_cols=37 Identities=24% Similarity=0.268 Sum_probs=26.9
Q ss_pred CCeEEEEEcCccCCC-cchHHHHHHHHHhcCcEEEEec
Q 025842 42 SKSAILLISDVFGYE-APLFRKLADKVAGAGFLVVAPD 78 (247)
Q Consensus 42 ~~~~vv~~hgg~g~~-~~~~~~~a~~la~~G~~v~~~d 78 (247)
.+|-|+++-|..|.. ....-.+|.+|-++|+.|+..-
T Consensus 137 ~~p~Vil~vGVNG~GKTTTIaKLA~~l~~~g~~VllaA 174 (340)
T COG0552 137 KKPFVILFVGVNGVGKTTTIAKLAKYLKQQGKSVLLAA 174 (340)
T ss_pred CCcEEEEEEecCCCchHhHHHHHHHHHHHCCCeEEEEe
Confidence 458888888766632 2345678899989999888764
No 455
>TIGR03707 PPK2_P_aer polyphosphate kinase 2, PA0141 family. Members of this protein family are designated polyphosphate kinase 2 (PPK2) after the characterized protein in Pseudomonas aeruginosa. This family comprises one of three well-separated clades in the larger family described by Pfam model pfam03976. PA0141 from this family has been shown capable of operating in reverse, with GDP preferred (over ADP) as a substrate, producing GTP (or ATP) by transfer of a phosphate residue from polyphosphate. Most species with a member of this family also encode a polyphosphate kinase 1 (PPK1).
Probab=20.13 E-value=1.4e+02 Score=23.42 Aligned_cols=38 Identities=11% Similarity=0.096 Sum_probs=27.9
Q ss_pred CeEEEEEcCccCCC-cchHHHHHHHHHhcCcEEEEeccC
Q 025842 43 KSAILLISDVFGYE-APLFRKLADKVAGAGFLVVAPDFF 80 (247)
Q Consensus 43 ~~~vv~~hgg~g~~-~~~~~~~a~~la~~G~~v~~~d~~ 80 (247)
.|.||++-|.-+.. ......+...|..+|+.|.++..+
T Consensus 30 ~~vlIv~eG~DaAGKg~~I~~l~~~lDPRg~~v~~~~~p 68 (230)
T TIGR03707 30 ARVVIVFEGRDAAGKGGTIKRITEHLNPRGARVVALPKP 68 (230)
T ss_pred CCEEEEEeCCCCCCchHHHHHHHHhcCCCeeEEEeCCCC
Confidence 57888888655432 234567888888899999998873
No 456
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=20.12 E-value=1.7e+02 Score=24.84 Aligned_cols=41 Identities=17% Similarity=0.286 Sum_probs=28.2
Q ss_pred CCeEEEEEcC------ccCCCcchHHHHHHHHHhcCcEEEEeccC-CCC
Q 025842 42 SKSAILLISD------VFGYEAPLFRKLADKVAGAGFLVVAPDFF-YGD 83 (247)
Q Consensus 42 ~~~~vv~~hg------g~g~~~~~~~~~a~~la~~G~~v~~~d~~-~g~ 83 (247)
+..-||++|+ |...+.+-|..+++.+.++|+..+. |+- .|.
T Consensus 170 ~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~-D~AYQGF 217 (396)
T COG1448 170 PEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFF-DIAYQGF 217 (396)
T ss_pred CCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeee-ehhhhhh
Confidence 3456999994 3445566788999999999877654 442 444
No 457
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=20.10 E-value=2e+02 Score=22.12 Aligned_cols=33 Identities=21% Similarity=0.099 Sum_probs=23.5
Q ss_pred eEEEEEcCccCCCcchHHHHHHHHHhcCcEEEEecc
Q 025842 44 SAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDF 79 (247)
Q Consensus 44 ~~vv~~hgg~g~~~~~~~~~a~~la~~G~~v~~~d~ 79 (247)
..++++-|+.+. .-..+++.|+++|+.|+..+.
T Consensus 12 ~k~vlItG~~g~---iG~~la~~l~~~G~~Vi~~~r 44 (247)
T PRK08945 12 DRIILVTGAGDG---IGREAALTYARHGATVILLGR 44 (247)
T ss_pred CCEEEEeCCCch---HHHHHHHHHHHCCCcEEEEeC
Confidence 345666655542 235688899999999999886
No 458
>cd03131 GATase1_HTS Type 1 glutamine amidotransferase (GATase1)-like domain found in homoserine trans-succinylase (HTS). Type 1 glutamine amidotransferase (GATase1)-like domain found in homoserine trans-succinylase (HTS). HTS, the first enzyme in methionine biosynthesis in Escherichia coli, transfers a succinyl group from succinyl-CoA to homoserine forming succinyl homoserine. It has been suggested that the succinyl group of succinyl-CoA is initially transferred to an enzyme nucleophile before subsequent transfer to homoserine. The catalytic triad typical of GATase1 domains is not conserved in this GATase1-like domain. However, in common with GATase1 domains a reactive cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. It has been proposed that this cys is in the active site of the molecule. However, as succinyl has been found bound to a conserved lysine residue, this conserved cys may play a role in dimer formation. HTS acti
Probab=20.01 E-value=40 Score=25.10 Aligned_cols=31 Identities=13% Similarity=0.207 Sum_probs=25.6
Q ss_pred chHHHHHHHHHhcCCCeEEEEEecccHHHHHHhh
Q 025842 109 VDAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLA 142 (247)
Q Consensus 109 ~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a 142 (247)
+.+..+++|.+++. .-.+|.|+|++.++.+.
T Consensus 85 ~El~~i~dwa~~~v---~stl~iCWgaqaal~~~ 115 (175)
T cd03131 85 EELTEILDWAKTHV---TSTLFSCWAAMAALYYF 115 (175)
T ss_pred HHHHHHHHHHHHhC---cchHHHHHHHHHHHHHH
Confidence 45889999998763 46889999999999876
Done!