Query 025845
Match_columns 247
No_of_seqs 161 out of 1609
Neff 11.1
Searched_HMMs 46136
Date Fri Mar 29 10:11:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025845.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/025845hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02965 Probable pheophorbida 100.0 1.7E-37 3.6E-42 238.2 18.7 228 11-246 5-249 (255)
2 PRK00870 haloalkane dehalogena 100.0 1.8E-35 3.8E-40 232.4 18.2 232 5-246 42-297 (302)
3 PLN02824 hydrolase, alpha/beta 100.0 2.6E-35 5.7E-40 230.6 18.7 231 8-246 28-290 (294)
4 PRK10349 carboxylesterase BioH 100.0 6E-35 1.3E-39 224.3 18.1 227 8-246 11-252 (256)
5 PLN02211 methyl indole-3-aceta 100.0 1.9E-34 4.2E-39 222.5 20.2 232 7-245 16-265 (273)
6 TIGR02240 PHA_depoly_arom poly 100.0 1.3E-34 2.9E-39 224.6 18.4 227 6-246 22-262 (276)
7 PRK03592 haloalkane dehalogena 100.0 4.4E-34 9.6E-39 223.8 19.7 232 8-246 26-285 (295)
8 PLN02679 hydrolase, alpha/beta 100.0 3.2E-34 6.8E-39 229.7 17.7 231 8-246 87-353 (360)
9 PRK03204 haloalkane dehalogena 100.0 1.2E-33 2.6E-38 219.9 18.5 233 7-246 32-284 (286)
10 PLN03087 BODYGUARD 1 domain co 100.0 7.2E-33 1.6E-37 225.3 18.7 235 8-246 200-475 (481)
11 PRK10673 acyl-CoA esterase; Pr 100.0 1.5E-32 3.2E-37 210.9 19.5 227 6-246 13-251 (255)
12 TIGR03056 bchO_mg_che_rel puta 100.0 9.1E-33 2E-37 214.5 17.8 233 5-246 24-276 (278)
13 TIGR03343 biphenyl_bphD 2-hydr 100.0 6.5E-33 1.4E-37 215.9 16.9 233 7-246 28-279 (282)
14 KOG4178 Soluble epoxide hydrol 100.0 7.9E-33 1.7E-37 208.5 16.5 242 4-246 39-316 (322)
15 TIGR03611 RutD pyrimidine util 100.0 1.5E-32 3.3E-37 210.6 17.4 235 7-246 11-254 (257)
16 TIGR01738 bioH putative pimelo 100.0 2.1E-32 4.4E-37 208.2 17.0 226 10-247 5-245 (245)
17 PRK06489 hypothetical protein; 100.0 3E-32 6.6E-37 218.6 18.5 230 9-246 69-353 (360)
18 PLN02578 hydrolase 100.0 6.7E-32 1.5E-36 216.0 18.6 229 7-246 84-351 (354)
19 PLN03084 alpha/beta hydrolase 100.0 1E-31 2.2E-36 214.6 19.1 234 5-246 123-380 (383)
20 PRK11126 2-succinyl-6-hydroxy- 100.0 7.7E-32 1.7E-36 205.4 17.0 218 9-246 2-238 (242)
21 PF12697 Abhydrolase_6: Alpha/ 100.0 4.5E-33 9.8E-38 209.2 8.3 216 12-242 1-228 (228)
22 KOG4409 Predicted hydrolase/ac 100.0 6.1E-31 1.3E-35 199.0 16.4 238 7-247 88-361 (365)
23 PLN02385 hydrolase; alpha/beta 100.0 9.1E-31 2E-35 209.4 18.1 226 7-241 85-332 (349)
24 KOG1454 Predicted hydrolase/ac 100.0 4E-31 8.7E-36 206.9 14.3 234 7-246 56-320 (326)
25 PHA02857 monoglyceride lipase; 100.0 4.7E-30 1E-34 199.3 19.2 227 8-246 24-269 (276)
26 TIGR02427 protocat_pcaD 3-oxoa 100.0 1.4E-30 3.1E-35 198.6 15.6 232 8-246 12-249 (251)
27 PLN02894 hydrolase, alpha/beta 100.0 5E-30 1.1E-34 207.6 16.9 238 6-247 102-382 (402)
28 TIGR03695 menH_SHCHC 2-succiny 100.0 2.6E-29 5.6E-34 191.5 19.1 230 9-246 1-249 (251)
29 PRK08775 homoserine O-acetyltr 100.0 2.7E-30 5.8E-35 206.1 13.6 232 9-246 57-335 (343)
30 TIGR01250 pro_imino_pep_2 prol 100.0 3.3E-29 7.2E-34 195.0 18.9 234 8-246 24-286 (288)
31 PLN02298 hydrolase, alpha/beta 100.0 1.5E-29 3.2E-34 201.2 16.5 225 8-243 58-306 (330)
32 PRK10749 lysophospholipase L2; 100.0 9E-29 1.9E-33 196.3 19.2 238 7-246 52-325 (330)
33 PRK07581 hypothetical protein; 100.0 8.9E-30 1.9E-34 203.1 11.2 234 9-246 41-332 (339)
34 TIGR01392 homoserO_Ac_trn homo 100.0 4.4E-29 9.4E-34 199.8 13.8 235 8-247 30-350 (351)
35 PRK14875 acetoin dehydrogenase 100.0 1.5E-28 3.3E-33 198.5 15.8 225 5-246 127-367 (371)
36 PRK00175 metX homoserine O-ace 100.0 2.9E-28 6.3E-33 196.5 15.0 233 9-246 48-370 (379)
37 PLN02980 2-oxoglutarate decarb 100.0 1.1E-27 2.4E-32 220.4 18.7 230 8-246 1370-1635(1655)
38 PLN02652 hydrolase; alpha/beta 99.9 2.4E-26 5.2E-31 184.9 18.8 228 8-246 135-383 (395)
39 KOG2382 Predicted alpha/beta h 99.9 1.9E-26 4.1E-31 174.2 16.1 231 7-246 50-309 (315)
40 TIGR01249 pro_imino_pep_1 prol 99.9 1.6E-26 3.4E-31 181.8 13.6 108 4-113 22-130 (306)
41 PLN02511 hydrolase 99.9 4.4E-27 9.6E-32 189.7 9.6 232 7-245 98-360 (388)
42 PRK05855 short chain dehydroge 99.9 1.5E-25 3.2E-30 191.2 14.4 239 4-246 20-288 (582)
43 COG2267 PldB Lysophospholipase 99.9 1.9E-24 4.1E-29 167.7 18.8 234 10-246 35-290 (298)
44 COG1647 Esterase/lipase [Gener 99.9 2.7E-24 5.9E-29 152.8 15.5 214 9-246 15-240 (243)
45 PRK06765 homoserine O-acetyltr 99.9 6E-24 1.3E-28 170.4 12.5 235 9-246 56-384 (389)
46 PRK05077 frsA fermentation/res 99.9 5.4E-23 1.2E-27 166.8 17.5 213 8-246 193-408 (414)
47 TIGR03100 hydr1_PEP hydrolase, 99.9 4.3E-23 9.3E-28 159.6 16.1 228 7-246 24-271 (274)
48 PRK10985 putative hydrolase; P 99.9 7.4E-24 1.6E-28 167.7 11.9 223 7-235 56-300 (324)
49 KOG1455 Lysophospholipase [Lip 99.9 2.1E-22 4.5E-27 150.2 16.6 222 10-238 55-296 (313)
50 PF00561 Abhydrolase_1: alpha/ 99.9 4.1E-24 8.8E-29 161.3 5.9 204 37-244 1-229 (230)
51 KOG2984 Predicted hydrolase [G 99.9 2E-24 4.4E-29 151.0 3.8 215 11-246 44-272 (277)
52 TIGR01607 PST-A Plasmodium sub 99.9 2.4E-22 5.1E-27 159.3 14.4 228 8-246 20-329 (332)
53 PRK11071 esterase YqiA; Provis 99.9 2.7E-21 5.8E-26 141.1 16.7 182 10-246 2-187 (190)
54 PRK13604 luxD acyl transferase 99.9 5.2E-22 1.1E-26 151.8 11.7 207 8-236 36-249 (307)
55 COG0596 MhpC Predicted hydrola 99.9 3.5E-21 7.6E-26 147.5 16.5 232 9-246 21-278 (282)
56 TIGR01838 PHA_synth_I poly(R)- 99.9 2.3E-21 5.1E-26 159.7 13.9 228 8-237 187-462 (532)
57 TIGR03101 hydr2_PEP hydrolase, 99.9 5.5E-21 1.2E-25 145.3 14.1 103 9-113 25-134 (266)
58 PRK10566 esterase; Provisional 99.8 2E-20 4.2E-25 143.2 13.2 190 7-231 25-233 (249)
59 KOG2564 Predicted acetyltransf 99.8 2.3E-20 4.9E-25 137.2 12.4 105 7-112 72-181 (343)
60 KOG4667 Predicted esterase [Li 99.8 7.3E-20 1.6E-24 129.6 12.9 216 7-242 31-250 (269)
61 TIGR01836 PHA_synth_III_C poly 99.8 9.4E-20 2E-24 145.9 14.4 101 9-114 62-172 (350)
62 PLN02872 triacylglycerol lipas 99.8 1E-19 2.2E-24 146.1 11.2 106 7-113 72-197 (395)
63 PF12695 Abhydrolase_5: Alpha/ 99.8 1.8E-19 3.9E-24 126.4 10.8 144 11-230 1-145 (145)
64 TIGR03230 lipo_lipase lipoprot 99.8 1.2E-18 2.7E-23 140.0 13.2 111 6-117 38-158 (442)
65 PRK07868 acyl-CoA synthetase; 99.8 1.6E-18 3.5E-23 155.3 14.3 103 7-113 65-177 (994)
66 PF06342 DUF1057: Alpha/beta h 99.8 2.2E-17 4.8E-22 122.6 16.3 108 10-119 36-143 (297)
67 cd00707 Pancreat_lipase_like P 99.7 2.1E-17 4.5E-22 127.4 11.0 111 6-117 33-151 (275)
68 TIGR02821 fghA_ester_D S-formy 99.7 5.7E-16 1.2E-20 120.0 17.3 107 7-113 40-173 (275)
69 COG3208 GrsT Predicted thioest 99.7 4E-16 8.8E-21 113.8 14.6 221 6-245 4-231 (244)
70 COG0429 Predicted hydrolase of 99.7 2E-16 4.3E-21 120.0 9.7 222 6-234 72-319 (345)
71 PRK11460 putative hydrolase; P 99.7 1.4E-15 3.1E-20 114.6 14.2 172 5-243 12-205 (232)
72 KOG1552 Predicted alpha/beta h 99.7 2E-15 4.4E-20 110.9 12.5 183 9-243 60-245 (258)
73 PLN02442 S-formylglutathione h 99.6 8.8E-15 1.9E-19 113.6 15.1 106 7-113 45-178 (283)
74 PLN00021 chlorophyllase 99.6 2.1E-15 4.5E-20 117.9 11.2 106 6-112 49-165 (313)
75 PF00975 Thioesterase: Thioest 99.6 3.2E-15 7E-20 112.9 11.0 104 10-116 1-107 (229)
76 KOG1838 Alpha/beta hydrolase [ 99.6 6.1E-15 1.3E-19 115.9 11.8 224 7-235 123-368 (409)
77 TIGR03502 lipase_Pla1_cef extr 99.6 4.8E-15 1E-19 126.5 11.7 90 9-98 449-575 (792)
78 PF00326 Peptidase_S9: Prolyl 99.6 7E-15 1.5E-19 109.8 9.1 189 25-246 3-205 (213)
79 TIGR01840 esterase_phb esteras 99.6 1E-13 2.2E-18 103.4 12.9 107 7-113 11-130 (212)
80 PF07819 PGAP1: PGAP1-like pro 99.6 1.6E-13 3.5E-18 102.5 13.7 119 7-129 2-139 (225)
81 PF03096 Ndr: Ndr family; Int 99.5 2E-13 4.3E-18 102.9 12.5 230 8-245 22-274 (283)
82 KOG2565 Predicted hydrolases o 99.5 1.8E-13 3.9E-18 105.0 11.9 102 10-112 153-263 (469)
83 KOG2931 Differentiation-relate 99.5 1.9E-12 4.1E-17 96.6 16.9 236 4-247 39-303 (326)
84 PF12146 Hydrolase_4: Putative 99.5 1E-13 2.3E-18 85.5 7.7 65 8-72 15-79 (79)
85 TIGR00976 /NonD putative hydro 99.5 6.1E-14 1.3E-18 118.7 9.0 105 7-113 20-132 (550)
86 KOG4391 Predicted alpha/beta h 99.5 2.5E-14 5.5E-19 101.9 5.4 185 7-232 76-265 (300)
87 COG2021 MET2 Homoserine acetyl 99.5 1.4E-12 3E-17 100.9 15.1 105 9-114 51-183 (368)
88 PF06500 DUF1100: Alpha/beta h 99.5 2.3E-13 4.9E-18 107.9 10.1 202 6-230 187-393 (411)
89 PF06821 Ser_hydrolase: Serine 99.5 3.3E-13 7.1E-18 96.3 9.9 154 12-234 1-157 (171)
90 PF10230 DUF2305: Uncharacteri 99.5 1.9E-12 4.1E-17 99.3 13.0 113 9-121 2-130 (266)
91 PF02230 Abhydrolase_2: Phosph 99.5 9.3E-13 2E-17 98.5 11.0 179 3-243 8-212 (216)
92 PF05728 UPF0227: Uncharacteri 99.4 9E-12 2E-16 89.9 15.2 180 12-247 2-186 (187)
93 COG1506 DAP2 Dipeptidyl aminop 99.4 1.7E-12 3.7E-17 111.1 12.3 201 10-245 395-611 (620)
94 TIGR01839 PHA_synth_II poly(R) 99.4 3E-12 6.5E-17 105.4 13.1 105 8-116 214-331 (560)
95 PRK10162 acetyl esterase; Prov 99.4 5.2E-12 1.1E-16 99.8 12.3 106 8-114 80-196 (318)
96 PRK10252 entF enterobactin syn 99.4 3.2E-12 6.9E-17 118.8 12.5 103 7-113 1066-1171(1296)
97 PF01738 DLH: Dienelactone hyd 99.4 1.1E-11 2.4E-16 92.9 11.6 170 7-240 12-199 (218)
98 COG3319 Thioesterase domains o 99.3 2.1E-11 4.6E-16 91.8 11.3 101 10-114 1-104 (257)
99 COG2945 Predicted hydrolase of 99.3 5.4E-11 1.2E-15 83.6 12.3 171 7-245 26-202 (210)
100 PF09752 DUF2048: Uncharacteri 99.3 9.5E-11 2.1E-15 90.8 12.7 224 7-245 90-344 (348)
101 PF01674 Lipase_2: Lipase (cla 99.3 8.7E-12 1.9E-16 91.9 5.5 89 9-99 1-96 (219)
102 PLN02733 phosphatidylcholine-s 99.2 3.1E-11 6.7E-16 98.2 8.8 91 20-112 105-200 (440)
103 PF05448 AXE1: Acetyl xylan es 99.2 1.1E-09 2.3E-14 86.2 16.8 198 6-231 80-304 (320)
104 TIGR01849 PHB_depoly_PhaZ poly 99.2 2.1E-10 4.5E-15 92.0 12.5 103 10-116 103-211 (406)
105 PF07859 Abhydrolase_3: alpha/ 99.2 1.8E-10 3.9E-15 85.9 11.5 99 12-115 1-112 (211)
106 PF12740 Chlorophyllase2: Chlo 99.2 1.2E-10 2.5E-15 87.3 9.4 106 7-113 15-131 (259)
107 PF00151 Lipase: Lipase; Inte 99.2 4.5E-11 9.8E-16 94.1 7.2 113 6-119 68-193 (331)
108 PF08538 DUF1749: Protein of u 99.2 3.9E-10 8.5E-15 86.2 11.5 102 8-117 32-152 (303)
109 PF06028 DUF915: Alpha/beta hy 99.2 2.1E-10 4.5E-15 86.7 8.5 109 7-115 9-145 (255)
110 COG4757 Predicted alpha/beta h 99.2 2E-10 4.3E-15 83.1 7.9 228 11-246 32-279 (281)
111 PF02273 Acyl_transf_2: Acyl t 99.1 2.3E-09 5E-14 78.4 13.1 208 9-236 30-242 (294)
112 COG3571 Predicted hydrolase of 99.1 6.1E-09 1.3E-13 71.2 11.5 112 9-121 14-132 (213)
113 PF05990 DUF900: Alpha/beta hy 99.1 3.3E-09 7.2E-14 79.8 11.2 108 6-113 15-137 (233)
114 smart00824 PKS_TE Thioesterase 99.0 4.2E-09 9.2E-14 78.1 11.6 98 14-115 2-104 (212)
115 COG0400 Predicted esterase [Ge 99.0 2E-09 4.4E-14 78.8 9.4 111 3-115 12-136 (207)
116 PF07224 Chlorophyllase: Chlor 99.0 1.5E-09 3.2E-14 80.2 8.2 105 7-112 44-156 (307)
117 PRK10115 protease 2; Provision 99.0 8.2E-09 1.8E-13 89.4 13.9 108 6-113 442-559 (686)
118 COG3243 PhaC Poly(3-hydroxyalk 99.0 1.3E-08 2.9E-13 80.3 11.9 101 9-114 107-218 (445)
119 COG1075 LipA Predicted acetylt 99.0 3E-09 6.5E-14 84.4 8.5 101 9-113 59-164 (336)
120 COG3545 Predicted esterase of 99.0 9.1E-09 2E-13 71.7 9.7 92 9-113 2-94 (181)
121 COG0412 Dienelactone hydrolase 98.9 1.8E-08 3.9E-13 76.0 10.9 101 10-111 28-144 (236)
122 KOG3975 Uncharacterized conser 98.9 1.5E-07 3.2E-12 69.2 13.9 108 7-114 27-148 (301)
123 PF02129 Peptidase_S15: X-Pro 98.9 2.8E-08 6.1E-13 77.0 11.1 110 5-116 16-139 (272)
124 PF05057 DUF676: Putative seri 98.9 1E-08 2.3E-13 76.5 8.1 87 9-97 4-97 (217)
125 PF03403 PAF-AH_p_II: Platelet 98.9 1E-08 2.2E-13 82.6 7.9 107 7-114 98-263 (379)
126 PRK05371 x-prolyl-dipeptidyl a 98.9 2.3E-08 5E-13 87.4 10.7 84 27-112 270-372 (767)
127 COG4814 Uncharacterized protei 98.8 4.3E-08 9.2E-13 72.2 9.2 104 10-114 46-177 (288)
128 COG3458 Acetyl esterase (deace 98.8 1.2E-08 2.7E-13 75.8 5.9 104 7-112 81-209 (321)
129 PF10503 Esterase_phd: Esteras 98.8 2E-07 4.3E-12 69.2 12.3 105 8-112 15-131 (220)
130 PF12715 Abhydrolase_7: Abhydr 98.8 4.5E-08 9.7E-13 77.0 9.3 105 6-111 112-258 (390)
131 COG0657 Aes Esterase/lipase [L 98.8 8.4E-07 1.8E-11 70.3 15.9 105 7-115 77-193 (312)
132 KOG2624 Triglyceride lipase-ch 98.7 2.6E-08 5.6E-13 79.9 6.7 107 7-113 71-199 (403)
133 KOG1553 Predicted alpha/beta h 98.7 6E-08 1.3E-12 74.5 8.1 102 7-112 240-344 (517)
134 PRK04940 hypothetical protein; 98.7 1E-07 2.2E-12 67.7 8.6 85 12-113 2-92 (180)
135 KOG3724 Negative regulator of 98.7 9.9E-08 2.1E-12 80.6 9.7 117 6-126 86-233 (973)
136 PF03959 FSH1: Serine hydrolas 98.7 5.3E-08 1.1E-12 72.5 7.4 163 8-234 3-205 (212)
137 KOG4627 Kynurenine formamidase 98.7 4.7E-08 1E-12 69.8 6.4 103 6-112 64-171 (270)
138 PF04301 DUF452: Protein of un 98.7 1.5E-07 3.3E-12 68.9 8.9 79 8-112 10-89 (213)
139 PF05677 DUF818: Chlamydia CHL 98.7 3.9E-07 8.4E-12 70.4 10.9 90 7-100 135-237 (365)
140 PF06057 VirJ: Bacterial virul 98.6 3.3E-07 7.2E-12 65.4 8.2 96 11-112 4-106 (192)
141 PTZ00472 serine carboxypeptida 98.6 7E-07 1.5E-11 74.0 10.7 106 7-113 75-216 (462)
142 COG4782 Uncharacterized protei 98.6 7.3E-07 1.6E-11 69.4 9.9 105 7-112 114-233 (377)
143 PF08840 BAAT_C: BAAT / Acyl-C 98.5 7.2E-08 1.6E-12 71.7 3.7 50 63-113 5-56 (213)
144 COG4188 Predicted dienelactone 98.5 4.6E-07 9.9E-12 70.9 8.2 208 8-239 70-303 (365)
145 COG3509 LpqC Poly(3-hydroxybut 98.5 1.9E-06 4.2E-11 65.3 10.6 104 9-113 61-179 (312)
146 PF02450 LCAT: Lecithin:choles 98.5 6.2E-07 1.3E-11 72.9 8.6 81 24-113 66-160 (389)
147 KOG1515 Arylacetamide deacetyl 98.5 8E-06 1.7E-10 64.5 14.5 109 7-119 88-213 (336)
148 PF00756 Esterase: Putative es 98.5 5.2E-07 1.1E-11 69.1 6.9 106 7-112 22-149 (251)
149 PLN02606 palmitoyl-protein thi 98.4 5.3E-06 1.1E-10 63.7 11.4 101 8-112 25-131 (306)
150 PF05577 Peptidase_S28: Serine 98.4 3.3E-06 7.2E-11 70.0 11.2 109 6-114 26-149 (434)
151 KOG3847 Phospholipase A2 (plat 98.4 1.5E-06 3.2E-11 66.2 7.1 105 8-113 117-275 (399)
152 KOG2100 Dipeptidyl aminopeptid 98.4 4.2E-06 9.1E-11 73.4 10.7 102 10-113 527-644 (755)
153 PF12048 DUF3530: Protein of u 98.4 2.5E-05 5.5E-10 61.4 14.0 112 6-117 84-233 (310)
154 KOG2112 Lysophospholipase [Lip 98.3 2.5E-06 5.4E-11 61.4 7.2 103 10-112 4-127 (206)
155 COG4099 Predicted peptidase [G 98.3 6.4E-06 1.4E-10 62.5 9.7 98 10-113 192-304 (387)
156 PRK10439 enterobactin/ferric e 98.3 8.2E-06 1.8E-10 66.7 11.1 107 7-113 207-323 (411)
157 COG3150 Predicted esterase [Ge 98.3 5.7E-06 1.2E-10 57.3 8.2 87 12-112 2-90 (191)
158 PF02089 Palm_thioest: Palmito 98.3 3.4E-06 7.3E-11 64.2 7.0 105 7-112 3-115 (279)
159 PLN02633 palmitoyl protein thi 98.2 1.4E-05 3.1E-10 61.5 9.7 101 8-112 24-130 (314)
160 PF11339 DUF3141: Protein of u 98.2 1E-05 2.2E-10 66.1 9.2 81 27-114 92-176 (581)
161 KOG2541 Palmitoyl protein thio 98.2 5.4E-05 1.2E-09 56.7 10.9 101 6-112 20-127 (296)
162 KOG4840 Predicted hydrolases o 98.1 6.8E-06 1.5E-10 59.7 5.6 102 9-114 36-145 (299)
163 cd00312 Esterase_lipase Estera 98.1 2.4E-05 5.3E-10 66.0 8.7 105 7-113 93-213 (493)
164 KOG3101 Esterase D [General fu 98.0 8.1E-06 1.8E-10 58.8 4.5 104 9-112 44-175 (283)
165 PF10340 DUF2424: Protein of u 98.0 0.00013 2.8E-09 58.1 11.3 106 8-116 121-238 (374)
166 PF05705 DUF829: Eukaryotic pr 98.0 0.00021 4.6E-09 54.3 11.8 219 11-246 1-239 (240)
167 KOG3967 Uncharacterized conser 98.0 0.00015 3.4E-09 52.4 10.0 103 9-112 101-226 (297)
168 PLN02517 phosphatidylcholine-s 97.9 2.5E-05 5.4E-10 65.2 6.3 84 23-112 156-262 (642)
169 KOG2551 Phospholipase/carboxyh 97.9 0.00075 1.6E-08 49.4 13.0 170 8-245 4-215 (230)
170 KOG2281 Dipeptidyl aminopeptid 97.9 5.6E-05 1.2E-09 63.2 7.7 102 7-108 640-757 (867)
171 COG2936 Predicted acyl esteras 97.9 4.9E-05 1.1E-09 63.4 7.2 108 7-114 43-160 (563)
172 KOG1551 Uncharacterized conser 97.8 4E-05 8.7E-10 57.2 5.4 214 19-246 122-362 (371)
173 KOG2183 Prolylcarboxypeptidase 97.8 0.00013 2.8E-09 58.0 7.7 100 10-112 81-201 (492)
174 cd00741 Lipase Lipase. Lipase 97.7 0.00012 2.6E-09 51.6 6.5 52 62-113 9-67 (153)
175 COG0627 Predicted esterase [Ge 97.7 0.00026 5.7E-09 55.6 7.7 106 9-114 54-188 (316)
176 COG2819 Predicted hydrolase of 97.6 0.0012 2.6E-08 50.0 10.3 38 76-113 135-172 (264)
177 KOG2182 Hydrolytic enzymes of 97.6 0.0007 1.5E-08 55.3 9.4 107 6-112 83-206 (514)
178 PF03583 LIP: Secretory lipase 97.6 0.00065 1.4E-08 53.1 9.0 85 27-111 17-111 (290)
179 PF01764 Lipase_3: Lipase (cla 97.6 0.00021 4.6E-09 49.4 5.7 38 60-98 47-84 (140)
180 COG2272 PnbA Carboxylesterase 97.5 0.00046 1E-08 56.4 7.3 107 7-114 92-218 (491)
181 PF11187 DUF2974: Protein of u 97.5 0.00063 1.4E-08 50.9 7.4 47 65-113 73-123 (224)
182 KOG2369 Lecithin:cholesterol a 97.5 0.00028 6.1E-09 57.2 5.8 86 23-111 124-223 (473)
183 PF07082 DUF1350: Protein of u 97.5 0.0006 1.3E-08 51.0 7.1 100 11-112 19-124 (250)
184 KOG1202 Animal-type fatty acid 97.4 0.001 2.2E-08 59.9 8.8 98 5-112 2119-2218(2376)
185 PF00450 Peptidase_S10: Serine 97.4 0.0019 4E-08 53.4 10.1 106 7-113 38-181 (415)
186 PF11144 DUF2920: Protein of u 97.2 0.0048 1E-07 49.7 10.2 35 78-112 184-218 (403)
187 PF00135 COesterase: Carboxyle 97.2 0.0021 4.5E-08 54.9 8.8 104 8-112 124-244 (535)
188 PF06259 Abhydrolase_8: Alpha/ 97.2 0.0013 2.9E-08 47.1 5.8 55 59-113 86-144 (177)
189 cd00519 Lipase_3 Lipase (class 97.1 0.00099 2.1E-08 50.3 4.8 29 69-98 120-148 (229)
190 COG3946 VirJ Type IV secretory 97.1 0.0029 6.3E-08 50.5 7.3 84 11-100 262-348 (456)
191 PF11288 DUF3089: Protein of u 97.0 0.0021 4.5E-08 47.2 5.5 72 27-99 37-116 (207)
192 KOG3043 Predicted hydrolase re 97.0 0.0022 4.8E-08 47.0 5.4 101 10-111 40-152 (242)
193 PLN02162 triacylglycerol lipas 96.9 0.0031 6.8E-08 51.6 6.5 37 60-97 261-297 (475)
194 COG2939 Carboxypeptidase C (ca 96.9 0.0049 1.1E-07 50.8 7.6 103 8-111 100-234 (498)
195 KOG4372 Predicted alpha/beta h 96.9 0.0019 4E-08 51.7 4.8 85 11-97 82-169 (405)
196 PLN00413 triacylglycerol lipas 96.8 0.0048 1.1E-07 50.7 6.7 37 60-97 267-303 (479)
197 COG2382 Fes Enterochelin ester 96.8 0.0047 1E-07 47.6 6.1 104 8-114 97-213 (299)
198 PF01083 Cutinase: Cutinase; 96.7 0.0088 1.9E-07 43.3 6.9 103 11-114 7-123 (179)
199 PF05277 DUF726: Protein of un 96.7 0.0043 9.2E-08 49.4 5.4 40 76-115 218-262 (345)
200 KOG2521 Uncharacterized conser 96.6 0.037 8E-07 44.1 10.4 105 8-112 37-151 (350)
201 PLN02571 triacylglycerol lipas 96.6 0.0039 8.4E-08 50.6 4.8 38 61-98 208-246 (413)
202 PLN02454 triacylglycerol lipas 96.6 0.0044 9.5E-08 50.2 5.1 34 63-97 212-247 (414)
203 KOG2237 Predicted serine prote 96.5 0.0026 5.7E-08 53.6 3.3 108 6-113 467-584 (712)
204 COG1770 PtrB Protease II [Amin 96.4 0.01 2.3E-07 50.4 6.2 109 6-114 445-563 (682)
205 PLN02408 phospholipase A1 96.3 0.0073 1.6E-07 48.3 4.9 37 62-98 183-220 (365)
206 PLN02934 triacylglycerol lipas 96.3 0.0078 1.7E-07 49.9 4.9 37 60-97 304-340 (515)
207 PLN02209 serine carboxypeptida 96.2 0.039 8.5E-07 45.8 8.6 106 7-113 66-212 (437)
208 COG1073 Hydrolases of the alph 96.1 0.044 9.5E-07 42.6 8.1 101 8-111 48-167 (299)
209 PLN03016 sinapoylglucose-malat 96.1 0.035 7.6E-07 46.0 7.7 106 7-113 64-210 (433)
210 PLN02324 triacylglycerol lipas 96.0 0.012 2.7E-07 47.7 4.8 36 62-97 198-234 (415)
211 PF05576 Peptidase_S37: PS-10 96.0 0.013 2.7E-07 47.3 4.7 104 6-111 60-168 (448)
212 PLN02310 triacylglycerol lipas 95.9 0.029 6.3E-07 45.6 6.5 37 61-97 189-228 (405)
213 PLN02802 triacylglycerol lipas 95.9 0.016 3.4E-07 48.2 4.9 36 62-97 313-349 (509)
214 PF04083 Abhydro_lipase: Parti 95.8 0.0082 1.8E-07 35.0 2.4 21 5-25 39-59 (63)
215 PF08386 Abhydrolase_4: TAP-li 95.8 0.012 2.6E-07 38.3 3.3 43 190-233 35-77 (103)
216 PF10142 PhoPQ_related: PhoPQ- 95.8 0.036 7.8E-07 44.7 6.4 136 76-233 170-306 (367)
217 PLN03037 lipase class 3 family 95.7 0.019 4E-07 47.9 4.6 37 61-97 298-337 (525)
218 PLN02753 triacylglycerol lipas 95.6 0.021 4.5E-07 47.7 4.7 37 61-97 291-331 (531)
219 PLN02719 triacylglycerol lipas 95.5 0.026 5.6E-07 47.0 4.8 37 61-97 277-317 (518)
220 PF09949 DUF2183: Uncharacteri 95.5 0.38 8.3E-06 31.0 9.5 84 24-108 12-97 (100)
221 PLN02761 lipase class 3 family 95.3 0.034 7.3E-07 46.4 4.8 36 62-97 273-313 (527)
222 COG2830 Uncharacterized protei 95.2 0.058 1.3E-06 37.6 5.1 77 10-112 12-89 (214)
223 KOG2029 Uncharacterized conser 95.1 0.062 1.3E-06 45.4 5.7 52 61-112 504-571 (697)
224 PLN02213 sinapoylglucose-malat 95.1 0.086 1.9E-06 42.0 6.5 77 37-113 2-96 (319)
225 PLN02847 triacylglycerol lipas 95.0 0.045 9.8E-07 46.4 5.0 27 70-97 244-270 (633)
226 KOG1516 Carboxylesterase and r 94.8 0.12 2.5E-06 44.6 7.0 104 9-112 112-231 (545)
227 KOG4569 Predicted lipase [Lipi 94.5 0.069 1.5E-06 42.8 4.6 36 61-97 155-190 (336)
228 COG1505 Serine proteases of th 93.9 0.16 3.6E-06 43.0 5.8 104 8-111 420-533 (648)
229 KOG3253 Predicted alpha/beta h 93.7 0.069 1.5E-06 45.2 3.2 95 8-112 175-285 (784)
230 COG4947 Uncharacterized protei 93.7 0.28 6E-06 34.8 5.7 102 8-112 25-135 (227)
231 PRK12467 peptide synthase; Pro 93.6 0.72 1.6E-05 49.2 10.8 102 9-114 3692-3796(3956)
232 PF07519 Tannase: Tannase and 93.4 0.43 9.3E-06 40.3 7.5 83 28-112 52-149 (474)
233 PF08237 PE-PPE: PE-PPE domain 92.1 1 2.3E-05 33.9 7.3 77 36-112 2-88 (225)
234 COG4553 DepA Poly-beta-hydroxy 91.2 6.1 0.00013 31.0 12.6 104 9-116 103-212 (415)
235 KOG2385 Uncharacterized conser 90.8 0.4 8.7E-06 40.0 4.2 43 75-117 444-491 (633)
236 COG5153 CVT17 Putative lipase 90.7 0.66 1.4E-05 35.8 5.0 44 66-111 264-307 (425)
237 KOG4540 Putative lipase essent 90.7 0.66 1.4E-05 35.8 5.0 44 66-111 264-307 (425)
238 KOG1283 Serine carboxypeptidas 90.3 0.4 8.7E-06 37.6 3.6 106 6-113 28-166 (414)
239 KOG1282 Serine carboxypeptidas 87.8 2.2 4.8E-05 35.7 6.5 105 8-112 72-212 (454)
240 COG1448 TyrB Aspartate/tyrosin 87.7 5.6 0.00012 32.3 8.4 86 10-112 172-264 (396)
241 PF06309 Torsin: Torsin; Inte 87.7 3.8 8.3E-05 27.7 6.4 59 5-73 48-115 (127)
242 cd01714 ETF_beta The electron 86.8 4.5 9.9E-05 29.9 7.2 65 35-109 75-145 (202)
243 PRK11613 folP dihydropteroate 85.6 6.9 0.00015 30.6 7.8 59 25-92 165-225 (282)
244 COG0529 CysC Adenylylsulfate k 85.0 12 0.00026 27.1 8.0 38 7-44 20-59 (197)
245 COG4287 PqaA PhoPQ-activated p 83.7 1 2.2E-05 36.2 2.5 145 69-231 226-371 (507)
246 PF00448 SRP54: SRP54-type pro 83.6 11 0.00023 27.8 7.8 75 25-109 72-148 (196)
247 KOG4388 Hormone-sensitive lipa 82.1 3.1 6.7E-05 35.8 4.8 103 8-111 395-506 (880)
248 smart00827 PKS_AT Acyl transfe 80.9 2.2 4.8E-05 33.5 3.7 29 68-97 73-101 (298)
249 cd07225 Pat_PNPLA6_PNPLA7 Pata 78.8 3.6 7.8E-05 32.7 4.2 63 23-99 2-64 (306)
250 PF00698 Acyl_transf_1: Acyl t 78.6 1.4 3.1E-05 35.0 2.0 30 67-97 74-103 (318)
251 TIGR03131 malonate_mdcH malona 78.5 3 6.6E-05 32.8 3.7 29 68-97 67-95 (295)
252 PF09994 DUF2235: Uncharacteri 78.1 25 0.00055 27.5 8.6 89 10-98 2-112 (277)
253 TIGR01425 SRP54_euk signal rec 77.8 37 0.0008 28.5 9.7 71 29-109 175-247 (429)
254 COG0218 Predicted GTPase [Gene 77.3 4.4 9.6E-05 29.8 3.9 67 5-74 20-104 (200)
255 TIGR03712 acc_sec_asp2 accesso 77.0 10 0.00022 31.9 6.3 91 4-99 284-378 (511)
256 COG0541 Ffh Signal recognition 76.7 21 0.00046 29.8 7.9 72 29-110 175-248 (451)
257 cd07198 Patatin Patatin-like p 76.0 5.2 0.00011 28.6 4.1 33 67-100 16-48 (172)
258 TIGR00128 fabD malonyl CoA-acy 76.0 3.5 7.7E-05 32.2 3.5 29 69-98 74-103 (290)
259 cd07207 Pat_ExoU_VipD_like Exo 75.9 5.2 0.00011 29.2 4.1 31 68-99 18-48 (194)
260 TIGR00521 coaBC_dfp phosphopan 75.7 38 0.00082 28.1 9.3 94 10-111 113-233 (390)
261 COG3933 Transcriptional antite 75.4 35 0.00076 28.6 8.7 89 10-111 110-200 (470)
262 PF06792 UPF0261: Uncharacteri 75.2 46 0.001 27.6 10.0 99 11-109 3-126 (403)
263 cd07227 Pat_Fungal_NTE1 Fungal 75.0 5.5 0.00012 31.0 4.2 32 67-99 28-59 (269)
264 PRK05579 bifunctional phosphop 74.2 35 0.00075 28.4 8.7 73 9-85 116-196 (399)
265 PRK10279 hypothetical protein; 74.2 5.6 0.00012 31.5 4.1 33 67-100 23-55 (300)
266 PTZ00472 serine carboxypeptida 74.0 2.7 5.8E-05 35.5 2.4 29 218-246 427-455 (462)
267 PF00326 Peptidase_S9: Prolyl 73.9 14 0.0003 27.2 6.1 63 8-73 143-208 (213)
268 PRK14974 cell division protein 73.7 41 0.00089 27.2 8.9 69 33-111 219-289 (336)
269 PF03610 EIIA-man: PTS system 72.4 25 0.00054 23.2 8.4 75 11-97 2-77 (116)
270 cd07210 Pat_hypo_W_succinogene 72.4 7.8 0.00017 29.1 4.4 31 69-100 20-50 (221)
271 COG1752 RssA Predicted esteras 71.8 6.3 0.00014 31.3 3.9 34 65-99 27-60 (306)
272 cd03818 GT1_ExpC_like This fam 71.1 38 0.00083 27.8 8.6 39 12-52 2-40 (396)
273 PRK06731 flhF flagellar biosyn 70.7 49 0.0011 25.8 9.6 76 24-109 141-219 (270)
274 KOG0781 Signal recognition par 69.6 38 0.00082 28.8 7.8 87 13-109 442-538 (587)
275 KOG1411 Aspartate aminotransfe 68.5 6.4 0.00014 31.6 3.1 86 10-111 198-290 (427)
276 cd07209 Pat_hypo_Ecoli_Z1214_l 68.4 9.4 0.0002 28.5 4.1 33 67-100 16-48 (215)
277 PF14253 AbiH: Bacteriophage a 68.3 5.2 0.00011 30.9 2.8 22 69-90 226-247 (270)
278 PF01583 APS_kinase: Adenylyls 67.6 26 0.00056 24.8 5.8 36 9-44 1-38 (156)
279 TIGR02816 pfaB_fam PfaB family 67.5 7 0.00015 33.7 3.5 32 67-99 254-286 (538)
280 cd07228 Pat_NTE_like_bacteria 67.4 9.8 0.00021 27.3 3.9 30 70-100 21-50 (175)
281 KOG0736 Peroxisome assembly fa 66.6 99 0.0021 28.3 10.0 89 37-131 765-860 (953)
282 cd03146 GAT1_Peptidase_E Type 66.4 43 0.00094 24.9 7.2 83 8-94 30-129 (212)
283 cd00006 PTS_IIA_man PTS_IIA, P 64.6 39 0.00085 22.5 8.0 73 11-95 3-75 (122)
284 PHA02114 hypothetical protein 64.3 12 0.00027 23.8 3.2 33 11-43 84-116 (127)
285 cd07205 Pat_PNPLA6_PNPLA7_NTE1 64.2 15 0.00033 26.2 4.3 30 69-99 20-49 (175)
286 PRK02399 hypothetical protein; 63.5 87 0.0019 26.1 10.9 97 13-109 6-128 (406)
287 cd07212 Pat_PNPLA9 Patatin-lik 62.8 14 0.00031 29.4 4.3 20 81-100 35-54 (312)
288 COG3727 Vsr DNA G:T-mismatch r 61.5 26 0.00057 23.8 4.6 35 9-43 57-115 (150)
289 PRK07313 phosphopantothenoylcy 61.1 42 0.00091 24.4 6.1 62 8-72 112-179 (182)
290 PF10081 Abhydrolase_9: Alpha/ 60.1 17 0.00037 28.4 4.0 51 62-112 91-146 (289)
291 PRK14729 miaA tRNA delta(2)-is 59.6 59 0.0013 25.8 7.1 74 9-84 3-99 (300)
292 PRK05282 (alpha)-aspartyl dipe 59.4 77 0.0017 24.1 8.3 38 8-45 30-70 (233)
293 cd07230 Pat_TGL4-5_like Triacy 59.2 6.5 0.00014 32.8 1.9 36 66-102 90-125 (421)
294 PF03283 PAE: Pectinacetyleste 59.0 29 0.00062 28.4 5.4 45 67-111 144-193 (361)
295 KOG1200 Mitochondrial/plastidi 59.0 73 0.0016 23.7 7.3 62 11-74 15-88 (256)
296 cd00739 DHPS DHPS subgroup of 57.9 56 0.0012 25.3 6.6 59 25-92 152-212 (257)
297 COG0400 Predicted esterase [Ge 57.8 7 0.00015 29.1 1.7 51 190-242 147-201 (207)
298 KOG2872 Uroporphyrinogen decar 57.8 57 0.0012 25.7 6.4 68 10-86 253-336 (359)
299 cd07208 Pat_hypo_Ecoli_yjju_li 57.7 20 0.00043 27.7 4.2 26 76-101 24-50 (266)
300 PF11713 Peptidase_C80: Peptid 57.5 5.8 0.00013 28.0 1.1 47 44-90 61-116 (157)
301 PF05724 TPMT: Thiopurine S-me 57.0 16 0.00035 27.4 3.5 31 10-45 38-68 (218)
302 TIGR00959 ffh signal recogniti 56.6 1.2E+02 0.0026 25.6 9.3 72 28-109 174-247 (428)
303 PF03205 MobB: Molybdopterin g 56.2 27 0.00058 24.1 4.3 44 11-54 1-46 (140)
304 PRK10867 signal recognition pa 55.7 1.3E+02 0.0028 25.5 9.8 70 30-109 177-248 (433)
305 KOG0780 Signal recognition par 55.6 1.1E+02 0.0023 25.5 7.8 61 29-99 176-236 (483)
306 PF09419 PGP_phosphatase: Mito 55.4 54 0.0012 23.5 5.7 53 32-88 36-88 (168)
307 COG0279 GmhA Phosphoheptose is 55.4 21 0.00047 25.4 3.6 73 13-90 44-121 (176)
308 COG1073 Hydrolases of the alph 55.3 0.96 2.1E-05 35.0 -3.5 90 8-98 87-180 (299)
309 PF00450 Peptidase_S10: Serine 54.4 8.6 0.00019 31.8 1.9 52 194-246 335-412 (415)
310 PRK14581 hmsF outer membrane N 54.4 61 0.0013 29.1 6.9 79 6-85 45-142 (672)
311 cd05312 NAD_bind_1_malic_enz N 54.2 38 0.00083 26.5 5.1 82 12-97 27-125 (279)
312 PF02230 Abhydrolase_2: Phosph 54.2 56 0.0012 24.2 6.1 57 8-72 154-213 (216)
313 COG1087 GalE UDP-glucose 4-epi 53.9 1.1E+02 0.0024 24.4 7.5 82 28-112 16-119 (329)
314 COG1506 DAP2 Dipeptidyl aminop 53.9 68 0.0015 28.5 7.3 64 7-73 549-615 (620)
315 PF00070 Pyr_redox: Pyridine n 53.9 32 0.00068 20.7 3.9 31 79-112 1-31 (80)
316 cd07232 Pat_PLPL Patain-like p 53.1 7.7 0.00017 32.2 1.3 39 67-106 85-123 (407)
317 PRK13256 thiopurine S-methyltr 53.0 18 0.00039 27.3 3.2 29 12-45 46-74 (226)
318 PF02590 SPOUT_MTase: Predicte 52.7 26 0.00056 24.8 3.7 45 35-89 66-110 (155)
319 TIGR02069 cyanophycinase cyano 52.0 1.1E+02 0.0023 23.6 7.3 39 7-45 26-66 (250)
320 PF13439 Glyco_transf_4: Glyco 51.3 47 0.001 23.0 5.1 32 16-47 9-40 (177)
321 KOG1209 1-Acyl dihydroxyaceton 51.3 32 0.00069 25.9 4.0 38 7-45 4-41 (289)
322 cd07229 Pat_TGL3_like Triacylg 50.8 18 0.00039 29.8 3.1 34 70-104 104-137 (391)
323 PRK00726 murG undecaprenyldiph 50.7 1.1E+02 0.0025 24.5 7.8 35 12-46 5-39 (357)
324 PRK08762 molybdopterin biosynt 50.5 1.4E+02 0.0031 24.5 8.4 37 72-112 131-168 (376)
325 COG3340 PepE Peptidase E [Amin 50.5 49 0.0011 24.8 4.9 38 8-45 31-71 (224)
326 PLN02924 thymidylate kinase 50.4 59 0.0013 24.5 5.6 46 1-46 6-54 (220)
327 PRK11889 flhF flagellar biosyn 49.8 1.6E+02 0.0034 24.8 9.0 79 21-109 304-385 (436)
328 cd07231 Pat_SDP1-like Sugar-De 49.7 11 0.00025 29.9 1.7 33 66-99 85-117 (323)
329 PLN02733 phosphatidylcholine-s 49.1 15 0.00032 31.0 2.4 19 3-21 13-31 (440)
330 COG4850 Uncharacterized conser 49.0 73 0.0016 25.6 5.9 98 11-112 215-314 (373)
331 cd07224 Pat_like Patatin-like 48.5 36 0.00077 25.8 4.2 22 79-100 30-51 (233)
332 PRK00091 miaA tRNA delta(2)-is 48.4 97 0.0021 24.8 6.7 73 9-83 3-99 (307)
333 PRK13397 3-deoxy-7-phosphohept 47.8 1.3E+02 0.0028 23.3 8.4 41 7-47 120-160 (250)
334 PRK06849 hypothetical protein; 47.6 1.1E+02 0.0025 25.1 7.4 61 24-86 16-85 (389)
335 PF08433 KTI12: Chromatin asso 47.5 50 0.0011 25.8 5.0 38 11-48 2-41 (270)
336 PF01656 CbiA: CobQ/CobB/MinD/ 47.4 38 0.00082 24.4 4.2 34 12-45 1-36 (195)
337 TIGR00689 rpiB_lacA_lacB sugar 46.8 98 0.0021 21.6 7.4 65 26-101 14-78 (144)
338 TIGR01118 lacA galactose-6-pho 46.7 97 0.0021 21.5 6.5 55 26-90 16-70 (141)
339 PRK06029 3-octaprenyl-4-hydrox 46.7 1.1E+02 0.0025 22.3 7.1 61 9-77 115-176 (185)
340 TIGR01361 DAHP_synth_Bsub phos 46.3 1.4E+02 0.003 23.2 8.3 73 7-88 130-206 (260)
341 PLN02748 tRNA dimethylallyltra 45.8 1.4E+02 0.003 25.6 7.5 74 9-84 21-118 (468)
342 PRK14479 dihydroxyacetone kina 45.8 54 0.0012 28.7 5.2 34 8-41 250-288 (568)
343 PF04244 DPRP: Deoxyribodipyri 45.5 56 0.0012 24.7 4.8 49 24-83 50-98 (224)
344 PF02502 LacAB_rpiB: Ribose/Ga 45.1 1E+02 0.0022 21.3 7.0 64 26-101 15-79 (140)
345 PRK13398 3-deoxy-7-phosphohept 44.5 1.5E+02 0.0033 23.1 9.0 96 7-111 132-233 (266)
346 TIGR02883 spore_cwlD N-acetylm 43.9 42 0.00091 24.5 3.9 36 38-74 1-42 (189)
347 cd07204 Pat_PNPLA_like Patatin 43.8 46 0.001 25.4 4.2 21 80-100 33-53 (243)
348 PRK00103 rRNA large subunit me 43.6 94 0.002 22.0 5.4 44 36-89 67-110 (157)
349 TIGR03709 PPK2_rel_1 polyphosp 43.6 1.1E+02 0.0023 23.9 6.1 71 8-90 54-126 (264)
350 PTZ00317 NADP-dependent malic 43.2 57 0.0012 28.4 4.9 83 11-97 299-401 (559)
351 PF01075 Glyco_transf_9: Glyco 43.1 45 0.00098 25.2 4.2 37 7-43 103-144 (247)
352 cd07206 Pat_TGL3-4-5_SDP1 Tria 42.7 37 0.0008 26.9 3.6 28 76-103 95-122 (298)
353 PRK05571 ribose-5-phosphate is 42.7 1.2E+02 0.0025 21.3 7.5 74 26-110 16-89 (148)
354 COG1763 MobB Molybdopterin-gua 42.4 96 0.0021 22.1 5.3 39 10-48 2-42 (161)
355 cd00401 AdoHcyase S-adenosyl-L 42.4 2.1E+02 0.0045 24.1 7.9 67 25-107 74-140 (413)
356 cd07217 Pat17_PNPLA8_PNPLA9_li 42.2 25 0.00054 28.5 2.6 19 81-99 44-62 (344)
357 PF03853 YjeF_N: YjeF-related 42.2 50 0.0011 23.6 4.0 59 6-74 22-80 (169)
358 COG4551 Predicted protein tyro 42.1 65 0.0014 20.4 3.8 28 35-74 74-101 (109)
359 PRK13255 thiopurine S-methyltr 41.9 41 0.00088 25.3 3.6 16 30-45 53-68 (218)
360 COG1576 Uncharacterized conser 41.9 1.2E+02 0.0025 21.5 5.4 56 28-95 60-115 (155)
361 PRK13512 coenzyme A disulfide 41.6 1E+02 0.0023 25.9 6.4 45 64-112 136-180 (438)
362 cd04951 GT1_WbdM_like This fam 41.0 1.8E+02 0.0039 23.0 8.5 35 12-46 3-39 (360)
363 PRK09273 hypothetical protein; 40.9 1.5E+02 0.0033 22.2 7.8 68 24-101 18-86 (211)
364 TIGR03707 PPK2_P_aer polyphosp 40.5 1.5E+02 0.0033 22.5 6.4 71 8-91 29-102 (230)
365 KOG4231 Intracellular membrane 40.2 34 0.00074 29.2 3.1 52 34-98 414-470 (763)
366 COG3673 Uncharacterized conser 39.9 2E+02 0.0044 23.3 9.8 91 7-97 29-141 (423)
367 PF09664 DUF2399: Protein of u 39.9 42 0.00091 23.6 3.2 33 7-41 39-71 (152)
368 KOG2730 Methylase [General fun 39.8 53 0.0012 24.8 3.7 64 24-100 54-117 (263)
369 PRK13529 malate dehydrogenase; 39.7 1.1E+02 0.0024 26.7 6.1 82 12-97 297-402 (563)
370 PF13207 AAA_17: AAA domain; P 39.2 52 0.0011 21.5 3.5 71 12-84 1-77 (121)
371 COG1092 Predicted SAM-dependen 39.2 1.1E+02 0.0024 25.4 5.9 19 36-54 290-308 (393)
372 COG0331 FabD (acyl-carrier-pro 39.2 37 0.00079 27.1 3.1 22 76-97 83-104 (310)
373 cd06562 GH20_HexA_HexB-like Be 38.8 1.2E+02 0.0026 24.7 6.1 30 21-50 68-98 (348)
374 cd07218 Pat_iPLA2 Calcium-inde 38.7 56 0.0012 25.1 4.0 20 81-100 33-52 (245)
375 PF08484 Methyltransf_14: C-me 38.6 68 0.0015 22.8 4.1 53 59-111 49-102 (160)
376 KOG2170 ATPase of the AAA+ sup 38.6 62 0.0014 25.8 4.1 29 5-33 105-135 (344)
377 cd01983 Fer4_NifH The Fer4_Nif 38.5 77 0.0017 19.2 4.2 31 13-43 2-34 (99)
378 TIGR02363 dhaK1 dihydroxyaceto 38.5 93 0.002 25.1 5.2 35 8-42 252-291 (329)
379 COG0859 RfaF ADP-heptose:LPS h 38.5 77 0.0017 25.5 4.9 35 9-43 175-215 (334)
380 PRK08621 galactose-6-phosphate 38.4 1.4E+02 0.003 20.8 6.3 55 26-90 16-70 (142)
381 COG4822 CbiK Cobalamin biosynt 38.1 1.8E+02 0.0038 22.0 7.6 63 7-84 136-200 (265)
382 PRK08622 galactose-6-phosphate 37.9 1.5E+02 0.0033 21.3 7.3 64 26-101 16-80 (171)
383 PTZ00215 ribose 5-phosphate is 37.8 1.4E+02 0.0031 21.0 7.4 70 26-107 18-89 (151)
384 PRK13230 nitrogenase reductase 37.5 79 0.0017 24.6 4.8 37 11-48 3-41 (279)
385 PF01341 Glyco_hydro_6: Glycos 37.5 68 0.0015 25.5 4.3 46 37-83 63-113 (298)
386 COG3186 Phenylalanine-4-hydrox 37.1 22 0.00048 27.1 1.5 15 228-243 148-162 (291)
387 COG3887 Predicted signaling pr 36.8 1.4E+02 0.0031 26.3 6.2 102 7-112 256-377 (655)
388 cd01819 Patatin_and_cPLA2 Pata 36.6 66 0.0014 22.5 3.9 19 78-96 28-46 (155)
389 TIGR03840 TMPT_Se_Te thiopurin 36.6 51 0.0011 24.6 3.4 16 30-45 50-65 (213)
390 PRK11460 putative hydrolase; P 36.6 1.6E+02 0.0034 22.2 6.1 41 8-48 147-190 (232)
391 PF00091 Tubulin: Tubulin/FtsZ 36.5 1.4E+02 0.0031 22.2 5.8 30 61-91 108-137 (216)
392 PF00731 AIRC: AIR carboxylase 36.4 1.5E+02 0.0033 20.8 6.9 77 10-100 1-78 (150)
393 TIGR03702 lip_kinase_YegS lipi 36.2 1.9E+02 0.0042 22.7 6.8 30 11-40 2-31 (293)
394 TIGR02361 dak_ATP dihydroxyace 36.2 88 0.0019 27.5 5.1 61 8-74 258-333 (574)
395 KOG1752 Glutaredoxin and relat 36.1 1.2E+02 0.0027 19.7 5.7 78 7-98 12-89 (104)
396 COG3621 Patatin [General funct 36.0 55 0.0012 26.3 3.5 52 37-100 9-64 (394)
397 TIGR02362 dhaK1b probable dihy 35.9 1.1E+02 0.0025 24.6 5.3 34 8-41 248-286 (326)
398 cd03348 pro_PheOH Prokaryotic 35.8 24 0.00052 26.7 1.5 16 227-243 116-131 (228)
399 PF15566 Imm18: Immunity prote 35.8 52 0.0011 18.3 2.4 30 60-90 4-33 (52)
400 PRK04148 hypothetical protein; 35.8 84 0.0018 21.6 4.0 46 62-112 3-48 (134)
401 cd07221 Pat_PNPLA3 Patatin-lik 35.7 69 0.0015 24.7 4.1 22 79-100 33-54 (252)
402 cd07220 Pat_PNPLA2 Patatin-lik 35.6 69 0.0015 24.7 4.0 22 79-100 37-58 (249)
403 PRK11320 prpB 2-methylisocitra 35.4 2.3E+02 0.0049 22.5 8.6 66 16-85 87-156 (292)
404 PF03490 Varsurf_PPLC: Variant 35.3 51 0.0011 18.1 2.3 26 58-84 6-31 (51)
405 PLN00179 acyl- [acyl-carrier p 35.2 41 0.00088 27.5 2.8 62 42-106 288-362 (390)
406 TIGR01120 rpiB ribose 5-phosph 34.9 1.6E+02 0.0034 20.5 7.5 64 26-101 15-79 (143)
407 PRK10751 molybdopterin-guanine 34.7 1.5E+02 0.0032 21.4 5.4 43 8-50 4-48 (173)
408 cd07211 Pat_PNPLA8 Patatin-lik 34.6 32 0.0007 27.3 2.2 17 81-97 44-60 (308)
409 CHL00175 minD septum-site dete 34.5 1.1E+02 0.0025 23.7 5.3 38 8-45 14-53 (281)
410 PRK07933 thymidylate kinase; V 34.5 1.3E+02 0.0028 22.4 5.3 39 12-50 2-42 (213)
411 PRK14483 DhaKLM operon coactiv 34.3 1.3E+02 0.0027 24.4 5.3 35 8-42 251-290 (329)
412 cd00361 arom_aa_hydroxylase Bi 34.2 27 0.00059 26.2 1.6 16 227-243 110-125 (221)
413 PRK10431 N-acetylmuramoyl-l-al 34.0 1.1E+02 0.0023 26.1 5.1 36 38-74 192-233 (445)
414 PRK11468 dihydroxyacetone kina 33.9 1.2E+02 0.0027 24.7 5.2 33 9-41 276-313 (356)
415 TIGR03586 PseI pseudaminic aci 33.9 2.6E+02 0.0056 22.7 8.9 80 7-97 132-213 (327)
416 cd07222 Pat_PNPLA4 Patatin-lik 33.9 68 0.0015 24.6 3.8 18 80-97 33-50 (246)
417 PRK12595 bifunctional 3-deoxy- 33.8 2.7E+02 0.0058 22.9 8.2 75 7-88 223-299 (360)
418 TIGR01119 lacB galactose-6-pho 33.8 1.8E+02 0.004 21.0 7.5 64 26-101 16-80 (171)
419 PF14252 DUF4347: Domain of un 33.7 98 0.0021 22.1 4.3 51 23-89 10-60 (165)
420 cd07213 Pat17_PNPLA8_PNPLA9_li 33.6 64 0.0014 25.4 3.7 20 80-99 36-55 (288)
421 PRK14481 dihydroxyacetone kina 33.5 1.2E+02 0.0027 24.5 5.2 35 8-42 251-290 (331)
422 cd06570 GH20_chitobiase-like_1 33.2 1.5E+02 0.0033 23.7 5.7 31 20-50 65-96 (311)
423 PF03405 FA_desaturase_2: Fatt 33.2 26 0.00057 28.1 1.5 61 42-105 231-304 (330)
424 PRK13938 phosphoheptose isomer 33.1 1.1E+02 0.0024 22.6 4.6 39 59-100 30-68 (196)
425 TIGR03607 patatin-related prot 33.1 65 0.0014 29.2 3.9 22 76-97 64-85 (739)
426 PRK12726 flagellar biosynthesi 32.9 3E+02 0.0064 23.1 9.4 79 21-109 269-350 (407)
427 cd01715 ETF_alpha The electron 32.9 1.8E+02 0.0039 20.6 6.3 70 30-109 45-117 (168)
428 PF03976 PPK2: Polyphosphate k 32.6 26 0.00056 26.6 1.3 71 9-92 30-103 (228)
429 PF01734 Patatin: Patatin-like 32.5 55 0.0012 23.2 3.1 23 76-98 25-47 (204)
430 PF00862 Sucrose_synth: Sucros 32.5 85 0.0018 27.0 4.3 40 59-99 382-423 (550)
431 TIGR01267 Phe4hydrox_mono phen 32.4 31 0.00068 26.4 1.7 16 227-243 116-131 (248)
432 KOG1336 Monodehydroascorbate/f 32.3 1.6E+02 0.0034 25.2 5.7 51 59-112 195-245 (478)
433 KOG1202 Animal-type fatty acid 32.0 80 0.0017 30.6 4.3 31 59-90 564-594 (2376)
434 PRK13054 lipid kinase; Reviewe 32.0 2.6E+02 0.0056 22.1 7.2 32 9-40 4-35 (300)
435 PRK00889 adenylylsulfate kinas 31.8 1.5E+02 0.0033 20.9 5.2 35 10-44 4-40 (175)
436 TIGR00064 ftsY signal recognit 31.7 2.5E+02 0.0055 21.9 9.7 69 34-111 152-227 (272)
437 COG4088 Predicted nucleotide k 31.7 60 0.0013 24.4 2.9 34 11-44 2-37 (261)
438 PRK05406 LamB/YcsF family prot 31.6 2.1E+02 0.0046 22.1 5.9 55 16-74 37-95 (246)
439 TIGR02813 omega_3_PfaA polyket 31.6 49 0.0011 34.8 3.3 29 67-96 664-692 (2582)
440 PLN02695 GDP-D-mannose-3',5'-e 31.5 2.9E+02 0.0063 22.6 8.2 35 9-46 21-55 (370)
441 TIGR00632 vsr DNA mismatch end 31.4 1.4E+02 0.003 20.0 4.4 14 29-42 100-113 (117)
442 PF09370 TIM-br_sig_trns: TIM- 31.4 85 0.0018 24.4 3.8 79 27-108 161-245 (268)
443 PF06792 UPF0261: Uncharacteri 31.3 1.8E+02 0.0038 24.4 5.8 43 8-50 183-225 (403)
444 cd02065 B12-binding_like B12 b 31.2 1.5E+02 0.0033 19.3 7.3 33 11-43 2-34 (125)
445 cd00423 Pterin_binding Pterin 31.0 1.4E+02 0.003 23.1 5.1 27 24-51 151-179 (258)
446 PF12242 Eno-Rase_NADH_b: NAD( 31.0 79 0.0017 19.3 2.9 24 76-99 38-61 (78)
447 PRK12615 galactose-6-phosphate 30.9 2.1E+02 0.0045 20.7 7.2 64 26-101 16-80 (171)
448 PLN02752 [acyl-carrier protein 30.9 54 0.0012 26.5 3.0 18 80-97 126-143 (343)
449 cd06292 PBP1_LacI_like_10 Liga 30.7 2.4E+02 0.0052 21.4 8.0 57 27-85 74-130 (273)
450 cd06143 PAN2_exo DEDDh 3'-5' e 30.7 44 0.00095 24.1 2.1 19 77-95 100-119 (174)
451 PRK14569 D-alanyl-alanine synt 30.6 1.4E+02 0.0031 23.5 5.2 37 9-45 3-44 (296)
452 PLN02863 UDP-glucoronosyl/UDP- 30.6 1.8E+02 0.0039 25.0 6.0 46 1-46 1-47 (477)
453 PRK13936 phosphoheptose isomer 30.5 1.6E+02 0.0034 21.7 5.1 38 60-100 29-66 (197)
454 PF04763 DUF562: Protein of un 30.3 1.9E+02 0.004 20.0 5.2 37 10-46 18-61 (146)
455 PRK10115 protease 2; Provision 30.3 1.6E+02 0.0035 26.6 6.0 66 6-74 603-676 (686)
456 PRK14582 pgaB outer membrane N 30.2 81 0.0018 28.3 4.0 77 7-84 46-141 (671)
457 PLN02735 carbamoyl-phosphate s 30.2 2E+02 0.0043 27.8 6.7 86 8-97 573-667 (1102)
458 PF00809 Pterin_bind: Pterin b 30.2 1.7E+02 0.0036 21.8 5.2 40 9-49 116-174 (210)
459 cd06564 GH20_DspB_LnbB-like Gl 30.1 2E+02 0.0043 23.2 6.0 31 20-50 79-110 (326)
460 PF01012 ETF: Electron transfe 30.0 2E+02 0.0043 20.2 7.4 61 29-99 51-113 (164)
461 PRK06193 hypothetical protein; 29.8 93 0.002 23.2 3.8 52 58-112 135-187 (206)
462 PRK12613 galactose-6-phosphate 29.7 2E+02 0.0042 20.1 6.4 54 26-90 16-69 (141)
463 TIGR00421 ubiX_pad polyprenyl 29.7 2.2E+02 0.0048 20.7 7.5 59 9-74 112-171 (181)
464 PF03681 UPF0150: Uncharacteri 29.5 75 0.0016 16.9 2.5 32 35-72 12-43 (48)
465 COG1255 Uncharacterized protei 29.5 68 0.0015 21.4 2.6 23 24-46 24-46 (129)
466 cd02696 MurNAc-LAA N-acetylmur 29.5 98 0.0021 21.9 3.8 29 40-69 2-32 (172)
467 PTZ00445 p36-lilke protein; Pr 29.3 1.7E+02 0.0037 22.0 5.0 68 22-89 28-103 (219)
468 PRK13753 dihydropteroate synth 29.3 2.9E+02 0.0062 21.8 6.6 57 31-95 159-219 (279)
469 cd02742 GH20_hexosaminidase Be 29.1 1.7E+02 0.0038 23.2 5.5 31 20-50 69-100 (303)
470 PF08197 TT_ORF2a: pORF2a trun 29.0 45 0.00098 17.6 1.4 13 38-50 36-48 (49)
471 PF01580 FtsK_SpoIIIE: FtsK/Sp 28.9 2.1E+02 0.0045 20.9 5.6 40 11-50 40-84 (205)
472 TIGR00176 mobB molybdopterin-g 28.8 1.4E+02 0.003 21.0 4.4 37 13-49 2-40 (155)
473 TIGR02113 coaC_strep phosphopa 28.7 1.8E+02 0.0039 21.0 5.0 37 8-44 111-150 (177)
474 TIGR02821 fghA_ester_D S-formy 28.7 2.2E+02 0.0048 22.0 6.0 41 8-48 210-254 (275)
475 TIGR00246 tRNA_RlmH_YbeA rRNA 28.6 1.4E+02 0.0031 21.0 4.4 42 37-89 66-107 (153)
476 PRK12724 flagellar biosynthesi 28.6 3.7E+02 0.008 22.8 9.0 73 28-109 291-367 (432)
477 PRK11913 phhA phenylalanine 4- 28.5 39 0.00084 26.4 1.6 16 227-243 132-147 (275)
478 TIGR03018 pepcterm_TyrKin exop 28.4 2.1E+02 0.0045 21.1 5.5 39 7-45 33-74 (207)
479 PRK12569 hypothetical protein; 28.4 2.6E+02 0.0057 21.6 5.9 55 16-74 40-98 (245)
480 PRK07877 hypothetical protein; 28.2 1E+02 0.0022 28.1 4.3 38 71-111 102-139 (722)
481 TIGR03127 RuMP_HxlB 6-phospho 28.2 99 0.0021 22.1 3.7 24 76-99 29-52 (179)
482 PLN02213 sinapoylglucose-malat 28.2 60 0.0013 26.0 2.8 27 219-246 287-313 (319)
483 COG4667 Predicted esterase of 28.0 74 0.0016 24.8 3.0 42 64-107 27-69 (292)
484 PF03033 Glyco_transf_28: Glyc 28.0 58 0.0013 21.9 2.4 34 12-45 2-35 (139)
485 PLN02840 tRNA dimethylallyltra 27.8 3.8E+02 0.0081 22.7 7.6 29 56-84 88-117 (421)
486 PHA00350 putative assembly pro 27.8 1.3E+02 0.0029 25.1 4.6 35 11-47 2-40 (399)
487 PF13478 XdhC_C: XdhC Rossmann 27.8 1.8E+02 0.0038 20.0 4.6 31 14-47 2-32 (136)
488 PRK14494 putative molybdopteri 27.8 1.9E+02 0.0042 22.0 5.2 40 11-50 2-43 (229)
489 PRK10964 ADP-heptose:LPS hepto 27.7 1.4E+02 0.0029 23.8 4.7 34 8-41 177-215 (322)
490 TIGR00682 lpxK tetraacyldisacc 27.6 1.9E+02 0.004 23.2 5.3 42 10-52 28-73 (311)
491 COG2376 DAK1 Dihydroxyacetone 27.5 1.8E+02 0.004 23.4 5.2 42 9-50 248-303 (323)
492 PRK03846 adenylylsulfate kinas 27.4 1.7E+02 0.0037 21.3 4.9 37 7-43 21-59 (198)
493 PF10412 TrwB_AAD_bind: Type I 27.3 94 0.002 25.7 3.8 34 13-46 18-53 (386)
494 PRK02399 hypothetical protein; 27.3 2.3E+02 0.005 23.7 5.8 44 7-50 183-226 (406)
495 PRK10319 N-acetylmuramoyl-l-al 27.2 1.3E+02 0.0029 23.8 4.4 18 36-54 55-72 (287)
496 COG1926 Predicted phosphoribos 27.1 2.4E+02 0.0053 21.2 5.3 48 60-107 7-55 (220)
497 PRK06696 uridine kinase; Valid 26.7 2.1E+02 0.0046 21.3 5.4 37 7-43 19-57 (223)
498 COG4874 Uncharacterized protei 26.7 1.3E+02 0.0028 23.0 4.0 27 25-51 59-85 (318)
499 TIGR02260 benz_CoA_red_B benzo 26.7 3.9E+02 0.0084 22.5 8.9 39 9-48 266-304 (413)
500 PRK11168 glpC sn-glycerol-3-ph 26.7 3.2E+02 0.0069 22.6 6.8 87 7-94 159-248 (396)
No 1
>PLN02965 Probable pheophorbidase
Probab=100.00 E-value=1.7e-37 Score=238.16 Aligned_cols=228 Identities=29% Similarity=0.444 Sum_probs=155.0
Q ss_pred EEEEEcCCCCChhhHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCC-CcEEEEEEehhH
Q 025845 11 HFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAE-EKVILVGHSLGG 89 (247)
Q Consensus 11 ~iv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~-~~~~lvGhS~Gg 89 (247)
+|||+||++.+...|+.+++.|++.+|+|+++|+||||.|+.+....++++++++|+.++++.+ +. ++++||||||||
T Consensus 5 ~vvllHG~~~~~~~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l-~~~~~~~lvGhSmGG 83 (255)
T PLN02965 5 HFVFVHGASHGAWCWYKLATLLDAAGFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDL-PPDHKVILVGHSIGG 83 (255)
T ss_pred EEEEECCCCCCcCcHHHHHHHHhhCCceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhc-CCCCCEEEEecCcch
Confidence 5999999999999999999999667899999999999999866544579999999999999999 66 599999999999
Q ss_pred HHHHHHHHhCCCccceEEEEeccCCCCCCChHHHHHHHHHhhcCCCCcccccccccccCCCCcccceeechhhHHHHHhc
Q 025845 90 VTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFLTIKIYQ 169 (247)
Q Consensus 90 ~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (247)
.+++.+|.++|++|+++|++++..+................. ........... ...+ ........++....++.
T Consensus 84 ~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~ 157 (255)
T PLN02965 84 GSVTEALCKFTDKISMAIYVAAAMVKPGSIISPRLKNVMEGT----EKIWDYTFGEG-PDKP-PTGIMMKPEFVRHYYYN 157 (255)
T ss_pred HHHHHHHHhCchheeEEEEEccccCCCCCCccHHHHhhhhcc----ccceeeeeccC-CCCC-cchhhcCHHHHHHHHhc
Confidence 999999999999999999999864322221111111111110 00000000000 0000 00000111111111111
Q ss_pred CCCcch------------hhhhhhh----hcccchhHHhhhhhhccchhHHHHHHHHHHHhhcCCcceeeecCCCccccc
Q 025845 170 LCPPEV------------INLLRIT----FIGRAIVLRQIVSYLYLDSDTMQIMLNFIIIIIITTHMSELINCSRRAFFL 233 (247)
Q Consensus 170 ~~~~~~------------~~~~~~~----~~~~~~~~~~~l~~g~~D~~~p~~~~~~~~~~~~~~~~~~~i~~~gH~~~~ 233 (247)
....+. ....... .....+.++..+..|++|.++|+...+.++ +.+|++++++++++||++++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vP~lvi~g~~D~~~~~~~~~~~~-~~~~~a~~~~i~~~GH~~~~ 236 (255)
T PLN02965 158 QSPLEDYTLSSKLLRPAPVRAFQDLDKLPPNPEAEKVPRVYIKTAKDNLFDPVRQDVMV-ENWPPAQTYVLEDSDHSAFF 236 (255)
T ss_pred CCCHHHHHHHHHhcCCCCCcchhhhhhccchhhcCCCCEEEEEcCCCCCCCHHHHHHHH-HhCCcceEEEecCCCCchhh
Confidence 111000 0000000 011235566666679999999999999999 99999999999999999999
Q ss_pred cChhhHHHHHHhh
Q 025845 234 YHNTLFIQFVYVL 246 (247)
Q Consensus 234 e~p~~~~~~v~~~ 246 (247)
|+|++|++.|..+
T Consensus 237 e~p~~v~~~l~~~ 249 (255)
T PLN02965 237 SVPTTLFQYLLQA 249 (255)
T ss_pred cCHHHHHHHHHHH
Confidence 9999999999875
No 2
>PRK00870 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=1.8e-35 Score=232.37 Aligned_cols=232 Identities=15% Similarity=0.033 Sum_probs=156.1
Q ss_pred CCCCCcEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEecCCCCCCCCCccc-CccCHHHhHHHHHHHHHhCCCCCcEEEE
Q 025845 5 VGMEEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIE-DVHTFHAYSEPLMEVLASLPAEEKVILV 83 (247)
Q Consensus 5 ~~~~~~~iv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~~l~~~i~~l~~~~~~~lv 83 (247)
|++++|+|||+||++++...|..+++.|.++||+|+++|+||||.|+.+.. ..++++++++++.++++++ +.++++|+
T Consensus 42 G~~~~~~lvliHG~~~~~~~w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~~l~~~l~~l-~~~~v~lv 120 (302)
T PRK00870 42 GPADGPPVLLLHGEPSWSYLYRKMIPILAAAGHRVIAPDLIGFGRSDKPTRREDYTYARHVEWMRSWFEQL-DLTDVTLV 120 (302)
T ss_pred CCCCCCEEEEECCCCCchhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHHc-CCCCEEEE
Confidence 445689999999999999999999999986789999999999999986542 3479999999999999999 88999999
Q ss_pred EEehhHHHHHHHHHhCCCccceEEEEeccCCCCCCChHHHHHHHHHhhcCCCCcccccccccccCCCCcccceeechhhH
Q 025845 84 GHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFL 163 (247)
Q Consensus 84 GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (247)
||||||.+++.+|.++|++|+++|++++..+............+...........+........ ......+..
T Consensus 121 GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~ 193 (302)
T PRK00870 121 CQDWGGLIGLRLAAEHPDRFARLVVANTGLPTGDGPMPDAFWAWRAFSQYSPVLPVGRLVNGGT-------VRDLSDAVR 193 (302)
T ss_pred EEChHHHHHHHHHHhChhheeEEEEeCCCCCCccccchHHHhhhhcccccCchhhHHHHhhccc-------cccCCHHHH
Confidence 9999999999999999999999999987533221110111111111000000000000000000 000000000
Q ss_pred HHH---------------Hhc---CCCc--chhhhhhhhhcccchhHHhhhhhhccchhHHHHHHHHHHHhhcCCcc---
Q 025845 164 TIK---------------IYQ---LCPP--EVINLLRITFIGRAIVLRQIVSYLYLDSDTMQIMLNFIIIIIITTHM--- 220 (247)
Q Consensus 164 ~~~---------------~~~---~~~~--~~~~~~~~~~~~~~~~~~~~l~~g~~D~~~p~~~~~~~~~~~~~~~~--- 220 (247)
..+ +.. .... ..............++++..+..|++|.++|... +.+. +.+++++
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~-~~~~-~~~~~~~~~~ 271 (302)
T PRK00870 194 AAYDAPFPDESYKAGARAFPLLVPTSPDDPAVAANRAAWAVLERWDKPFLTAFSDSDPITGGGD-AILQ-KRIPGAAGQP 271 (302)
T ss_pred HHhhcccCChhhhcchhhhhhcCCCCCCCcchHHHHHHHHhhhcCCCceEEEecCCCCcccCch-HHHH-hhcccccccc
Confidence 000 000 0000 0000011112234566777788899999999866 7787 8889876
Q ss_pred eeeecCCCccccccChhhHHHHHHhh
Q 025845 221 SELINCSRRAFFLYHNTLFIQFVYVL 246 (247)
Q Consensus 221 ~~~i~~~gH~~~~e~p~~~~~~v~~~ 246 (247)
+++++++||++++|+|++|++.|..+
T Consensus 272 ~~~i~~~gH~~~~e~p~~~~~~l~~f 297 (302)
T PRK00870 272 HPTIKGAGHFLQEDSGEELAEAVLEF 297 (302)
T ss_pred eeeecCCCccchhhChHHHHHHHHHH
Confidence 89999999999999999999998765
No 3
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=2.6e-35 Score=230.63 Aligned_cols=231 Identities=15% Similarity=0.152 Sum_probs=156.7
Q ss_pred CCcEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEecCCCCCCCCCccc------CccCHHHhHHHHHHHHHhCCCCCcEE
Q 025845 8 EEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIE------DVHTFHAYSEPLMEVLASLPAEEKVI 81 (247)
Q Consensus 8 ~~~~iv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~------~~~~~~~~~~~l~~~i~~l~~~~~~~ 81 (247)
.+|+|||+||++++...|..+++.|+++ |+|+++|+||||.|+.+.. ..++++++++++.++++++ +.++++
T Consensus 28 ~~~~vlllHG~~~~~~~w~~~~~~L~~~-~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~l-~~~~~~ 105 (294)
T PLN02824 28 SGPALVLVHGFGGNADHWRKNTPVLAKS-HRVYAIDLLGYGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSDV-VGDPAF 105 (294)
T ss_pred CCCeEEEECCCCCChhHHHHHHHHHHhC-CeEEEEcCCCCCCCCCCccccccccccCCHHHHHHHHHHHHHHh-cCCCeE
Confidence 4689999999999999999999999964 8999999999999986542 2489999999999999999 889999
Q ss_pred EEEEehhHHHHHHHHHhCCCccceEEEEeccCCCCC--CC---hHHHHHHHHHhhcCC-C-Ccccc---------ccccc
Q 025845 82 LVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTT--HR---PSFVLEQYSEKMGKE-D-DSWLD---------TQFSQ 145 (247)
Q Consensus 82 lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~--~~---~~~~~~~~~~~~~~~-~-~~~~~---------~~~~~ 145 (247)
|+||||||++++.+|.++|++|+++|++++...... .. .......+...+... . ..+.. .....
T Consensus 106 lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (294)
T PLN02824 106 VICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQPWLGRPFIKAFQNLLRETAVGKAFFKSVATPETVKNILCQ 185 (294)
T ss_pred EEEeCHHHHHHHHHHHhChhheeEEEEECCCcccccccccchhhhHHHHHHHHHHhchhHHHHHHHhhcCHHHHHHHHHH
Confidence 999999999999999999999999999998532211 01 011111111111000 0 00000 00000
Q ss_pred ccCCCCcccceeechhhHHHHHhcCCCcchhhhhhh----------hhcccchhHHhhhhhhccchhHHHHHHHHHHHhh
Q 025845 146 CDASNPSHISMLFGREFLTIKIYQLCPPEVINLLRI----------TFIGRAIVLRQIVSYLYLDSDTMQIMLNFIIIII 215 (247)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~l~~g~~D~~~p~~~~~~~~~~~ 215 (247)
.... .....++....+............... ......++++.++..|++|.++|.+..+.+. +.
T Consensus 186 ~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~-~~ 259 (294)
T PLN02824 186 CYHD-----DSAVTDELVEAILRPGLEPGAVDVFLDFISYSGGPLPEELLPAVKCPVLIAWGEKDPWEPVELGRAYA-NF 259 (294)
T ss_pred hccC-----hhhccHHHHHHHHhccCCchHHHHHHHHhccccccchHHHHhhcCCCeEEEEecCCCCCChHHHHHHH-hc
Confidence 0000 111122222222111111111000000 0112344566667779999999999999887 88
Q ss_pred cCCcceeeecCCCccccccChhhHHHHHHhh
Q 025845 216 ITTHMSELINCSRRAFFLYHNTLFIQFVYVL 246 (247)
Q Consensus 216 ~~~~~~~~i~~~gH~~~~e~p~~~~~~v~~~ 246 (247)
++++++++++++||++++|+|++|++.|..+
T Consensus 260 ~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~f 290 (294)
T PLN02824 260 DAVEDFIVLPGVGHCPQDEAPELVNPLIESF 290 (294)
T ss_pred CCccceEEeCCCCCChhhhCHHHHHHHHHHH
Confidence 8889999999999999999999999999875
No 4
>PRK10349 carboxylesterase BioH; Provisional
Probab=100.00 E-value=6e-35 Score=224.27 Aligned_cols=227 Identities=19% Similarity=0.216 Sum_probs=146.6
Q ss_pred CC-cEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCCcEEEEEEe
Q 025845 8 EE-KHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHS 86 (247)
Q Consensus 8 ~~-~~iv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~lvGhS 86 (247)
++ |+|||+||++++...|.++++.|.+ +|+|+++|+||||.|+.+. .++++++++++.+ + ..++++|||||
T Consensus 11 ~g~~~ivllHG~~~~~~~w~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~--~~~~~~~~~~l~~----~-~~~~~~lvGhS 82 (256)
T PRK10349 11 QGNVHLVLLHGWGLNAEVWRCIDEELSS-HFTLHLVDLPGFGRSRGFG--ALSLADMAEAVLQ----Q-APDKAIWLGWS 82 (256)
T ss_pred CCCCeEEEECCCCCChhHHHHHHHHHhc-CCEEEEecCCCCCCCCCCC--CCCHHHHHHHHHh----c-CCCCeEEEEEC
Confidence 45 4699999999999999999999985 5999999999999998654 3688888777653 5 56899999999
Q ss_pred hhHHHHHHHHHhCCCccceEEEEeccCCCCCC----C-hHHHHHHHHHhhcCCCCcccccccccccCCCCcccceeechh
Q 025845 87 LGGVTLALAADKFPHKISVAVFVTAFMPDTTH----R-PSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGRE 161 (247)
Q Consensus 87 ~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (247)
|||.+++.+|.++|++|+++|++++....... . .......+...+...........+........ .......
T Consensus 83 ~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 159 (256)
T PRK10349 83 LGGLVASQIALTHPERVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQRTVERFLALQTMGTE---TARQDAR 159 (256)
T ss_pred HHHHHHHHHHHhChHhhheEEEecCccceecCCCCCcccHHHHHHHHHHHHhchHHHHHHHHHHHHccCc---hHHHHHH
Confidence 99999999999999999999999885221111 0 00111122111100001111111100000000 0000000
Q ss_pred hHHHHHhcCCCcchhhhh---------hhhhcccchhHHhhhhhhccchhHHHHHHHHHHHhhcCCcceeeecCCCcccc
Q 025845 162 FLTIKIYQLCPPEVINLL---------RITFIGRAIVLRQIVSYLYLDSDTMQIMLNFIIIIIITTHMSELINCSRRAFF 232 (247)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~l~~g~~D~~~p~~~~~~~~~~~~~~~~~~~i~~~gH~~~ 232 (247)
.................. ........++++.++..|++|.++|.+..+.+. +.+++++++++|++||+++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~-~~i~~~~~~~i~~~gH~~~ 238 (256)
T PRK10349 160 ALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLD-KLWPHSESYIFAKAAHAPF 238 (256)
T ss_pred HHHHHhhccCCCcHHHHHHHHHHHHhCccHHHHhhcCCCeEEEecCCCccCCHHHHHHHH-HhCCCCeEEEeCCCCCCcc
Confidence 011111111111000000 001123344556666669999999999999988 8899999999999999999
Q ss_pred ccChhhHHHHHHhh
Q 025845 233 LYHNTLFIQFVYVL 246 (247)
Q Consensus 233 ~e~p~~~~~~v~~~ 246 (247)
+|+|++|++.|.++
T Consensus 239 ~e~p~~f~~~l~~~ 252 (256)
T PRK10349 239 ISHPAEFCHLLVAL 252 (256)
T ss_pred ccCHHHHHHHHHHH
Confidence 99999999999875
No 5
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=100.00 E-value=1.9e-34 Score=222.49 Aligned_cols=232 Identities=29% Similarity=0.496 Sum_probs=158.3
Q ss_pred CCCcEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCCcEEEEEEe
Q 025845 7 MEEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHS 86 (247)
Q Consensus 7 ~~~~~iv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~lvGhS 86 (247)
.++|+|||+||++++...|.+++..|.++||+|+++|+||||.|.......++++++++++.++++.+...++++|||||
T Consensus 16 ~~~p~vvliHG~~~~~~~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~~~~~~~~~~~~l~~~i~~l~~~~~v~lvGhS 95 (273)
T PLN02211 16 RQPPHFVLIHGISGGSWCWYKIRCLMENSGYKVTCIDLKSAGIDQSDADSVTTFDEYNKPLIDFLSSLPENEKVILVGHS 95 (273)
T ss_pred CCCCeEEEECCCCCCcCcHHHHHHHHHhCCCEEEEecccCCCCCCCCcccCCCHHHHHHHHHHHHHhcCCCCCEEEEEEC
Confidence 56789999999999999999999999877999999999999998655433479999999999999998335899999999
Q ss_pred hhHHHHHHHHHhCCCccceEEEEeccCCCCCCChHHHHHHHHHhhcC--CCCcccccccccccCCCCcccceeechhhHH
Q 025845 87 LGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGK--EDDSWLDTQFSQCDASNPSHISMLFGREFLT 164 (247)
Q Consensus 87 ~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (247)
|||.+++.++.++|++|+++|++++..+..+..... .+...+.. ............ ..... ........+...
T Consensus 96 ~GG~v~~~~a~~~p~~v~~lv~~~~~~~~~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~ 170 (273)
T PLN02211 96 AGGLSVTQAIHRFPKKICLAVYVAATMLKLGFQTDE---DMKDGVPDLSEFGDVYELGFGL-GPDQP-PTSAIIKKEFRR 170 (273)
T ss_pred chHHHHHHHHHhChhheeEEEEeccccCCCCCCHHH---HHhccccchhhhccceeeeecc-CCCCC-CceeeeCHHHHH
Confidence 999999999999999999999998864433333211 11111100 000000000000 00000 001122333333
Q ss_pred HHHhcCCCcchhhhhhhh------h---------cccch-hHHhhhhhhccchhHHHHHHHHHHHhhcCCcceeeecCCC
Q 025845 165 IKIYQLCPPEVINLLRIT------F---------IGRAI-VLRQIVSYLYLDSDTMQIMLNFIIIIIITTHMSELINCSR 228 (247)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~------~---------~~~~~-~~~~~l~~g~~D~~~p~~~~~~~~~~~~~~~~~~~i~~~g 228 (247)
..+++............. . ....+ +++..+..|++|..+|++.++.+. +.+++++++.++ +|
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~l~I~g~~D~~ip~~~~~~m~-~~~~~~~~~~l~-~g 248 (273)
T PLN02211 171 KILYQMSPQEDSTLAAMLLRPGPILALRSARFEEETGDIDKVPRVYIKTLHDHVVKPEQQEAMI-KRWPPSQVYELE-SD 248 (273)
T ss_pred HHHhcCCCHHHHHHHHHhcCCcCccccccccccccccccCccceEEEEeCCCCCCCHHHHHHHH-HhCCccEEEEEC-CC
Confidence 344433322111110000 0 01112 445566669999999999999998 888999999996 89
Q ss_pred ccccccChhhHHHHHHh
Q 025845 229 RAFFLYHNTLFIQFVYV 245 (247)
Q Consensus 229 H~~~~e~p~~~~~~v~~ 245 (247)
|.||+|+|+++++.|..
T Consensus 249 H~p~ls~P~~~~~~i~~ 265 (273)
T PLN02211 249 HSPFFSTPFLLFGLLIK 265 (273)
T ss_pred CCccccCHHHHHHHHHH
Confidence 99999999999999875
No 6
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=100.00 E-value=1.3e-34 Score=224.61 Aligned_cols=227 Identities=12% Similarity=0.079 Sum_probs=155.5
Q ss_pred CCCCcEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCCcEEEEEE
Q 025845 6 GMEEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGH 85 (247)
Q Consensus 6 ~~~~~~iv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~lvGh 85 (247)
+++++||||+||++++...|.++++.|.+ +|+|+++|+||||.|+.+.. .++++++++++.++++.+ +.++++||||
T Consensus 22 ~~~~~plvllHG~~~~~~~w~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~~-~~~~~~~~~~~~~~i~~l-~~~~~~LvG~ 98 (276)
T TIGR02240 22 KEGLTPLLIFNGIGANLELVFPFIEALDP-DLEVIAFDVPGVGGSSTPRH-PYRFPGLAKLAARMLDYL-DYGQVNAIGV 98 (276)
T ss_pred CCCCCcEEEEeCCCcchHHHHHHHHHhcc-CceEEEECCCCCCCCCCCCC-cCcHHHHHHHHHHHHHHh-CcCceEEEEE
Confidence 34558999999999999999999999984 69999999999999986643 479999999999999999 8899999999
Q ss_pred ehhHHHHHHHHHhCCCccceEEEEeccCCCCCCC-hHHHHHHHHHhhcCCCCccccc----ccccccCCCCcccceeech
Q 025845 86 SLGGVTLALAADKFPHKISVAVFVTAFMPDTTHR-PSFVLEQYSEKMGKEDDSWLDT----QFSQCDASNPSHISMLFGR 160 (247)
Q Consensus 86 S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 160 (247)
||||.+++.+|.++|++|+++|++++........ .......+.. ...+... ......... .....+
T Consensus 99 S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~----~~~~~~ 169 (276)
T TIGR02240 99 SWGGALAQQFAHDYPERCKKLILAATAAGAVMVPGKPKVLMMMAS-----PRRYIQPSHGIHIAPDIYGG----AFRRDP 169 (276)
T ss_pred CHHHHHHHHHHHHCHHHhhheEEeccCCccccCCCchhHHHHhcC-----chhhhccccccchhhhhccc----eeeccc
Confidence 9999999999999999999999999864321111 1111111100 0000000 000000000 000011
Q ss_pred hhHHHHHhcCCCcc---h-hhhhh-----hhhcccchhHHhhhhhhccchhHHHHHHHHHHHhhcCCcceeeecCCCccc
Q 025845 161 EFLTIKIYQLCPPE---V-INLLR-----ITFIGRAIVLRQIVSYLYLDSDTMQIMLNFIIIIIITTHMSELINCSRRAF 231 (247)
Q Consensus 161 ~~~~~~~~~~~~~~---~-~~~~~-----~~~~~~~~~~~~~l~~g~~D~~~p~~~~~~~~~~~~~~~~~~~i~~~gH~~ 231 (247)
+............. . ..... .......++++.++..|++|.++|.+..+.+. ..+|+++++++++ ||++
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~v~~~~~~~l~-~~~~~~~~~~i~~-gH~~ 247 (276)
T TIGR02240 170 ELAMAHASKVRSGGKLGYYWQLFAGLGWTSIHWLHKIQQPTLVLAGDDDPIIPLINMRLLA-WRIPNAELHIIDD-GHLF 247 (276)
T ss_pred hhhhhhhhhcccCCCchHHHHHHHHcCCchhhHhhcCCCCEEEEEeCCCCcCCHHHHHHHH-HhCCCCEEEEEcC-CCch
Confidence 11111110000000 0 00000 01123455667777779999999999999998 8999999999975 9999
Q ss_pred cccChhhHHHHHHhh
Q 025845 232 FLYHNTLFIQFVYVL 246 (247)
Q Consensus 232 ~~e~p~~~~~~v~~~ 246 (247)
++|+|++|++.|.++
T Consensus 248 ~~e~p~~~~~~i~~f 262 (276)
T TIGR02240 248 LITRAEAVAPIIMKF 262 (276)
T ss_pred hhccHHHHHHHHHHH
Confidence 999999999999875
No 7
>PRK03592 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=4.4e-34 Score=223.82 Aligned_cols=232 Identities=13% Similarity=0.075 Sum_probs=152.9
Q ss_pred CCcEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCCcEEEEEEeh
Q 025845 8 EEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSL 87 (247)
Q Consensus 8 ~~~~iv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~lvGhS~ 87 (247)
++++|||+||++++...|..+++.|.++ |+|+++|+||||.|+.+.. .++++++++++.++++++ +.++++++||||
T Consensus 26 ~g~~vvllHG~~~~~~~w~~~~~~L~~~-~~via~D~~G~G~S~~~~~-~~~~~~~a~dl~~ll~~l-~~~~~~lvGhS~ 102 (295)
T PRK03592 26 EGDPIVFLHGNPTSSYLWRNIIPHLAGL-GRCLAPDLIGMGASDKPDI-DYTFADHARYLDAWFDAL-GLDDVVLVGHDW 102 (295)
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHhhC-CEEEEEcCCCCCCCCCCCC-CCCHHHHHHHHHHHHHHh-CCCCeEEEEECH
Confidence 5789999999999999999999999965 6999999999999987764 479999999999999999 889999999999
Q ss_pred hHHHHHHHHHhCCCccceEEEEeccCCCCC-CChHHHHHHHHHhhcCCC--Ccccc--c-ccccccCCCCcccceeechh
Q 025845 88 GGVTLALAADKFPHKISVAVFVTAFMPDTT-HRPSFVLEQYSEKMGKED--DSWLD--T-QFSQCDASNPSHISMLFGRE 161 (247)
Q Consensus 88 Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~--~-~~~~~~~~~~~~~~~~~~~~ 161 (247)
||.+|+.+|.++|++|+++|++++...... .........+...+.... ..... . .......... .....++
T Consensus 103 Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 179 (295)
T PRK03592 103 GSALGFDWAARHPDRVRGIAFMEAIVRPMTWDDFPPAVRELFQALRSPGEGEEMVLEENVFIERVLPGSI---LRPLSDE 179 (295)
T ss_pred HHHHHHHHHHhChhheeEEEEECCCCCCcchhhcchhHHHHHHHHhCcccccccccchhhHHhhcccCcc---cccCCHH
Confidence 999999999999999999999998422111 100001111111110000 00000 0 0000000000 0011111
Q ss_pred hHHHHHhcCCCcc-----------------hhhhh----hhhhcccchhHHhhhhhhccchhHHH-HHHHHHHHhhcCCc
Q 025845 162 FLTIKIYQLCPPE-----------------VINLL----RITFIGRAIVLRQIVSYLYLDSDTMQ-IMLNFIIIIIITTH 219 (247)
Q Consensus 162 ~~~~~~~~~~~~~-----------------~~~~~----~~~~~~~~~~~~~~l~~g~~D~~~p~-~~~~~~~~~~~~~~ 219 (247)
....+........ ..... ........+.++.++..|++|.++++ ...+.+. ..++++
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~-~~~~~~ 258 (295)
T PRK03592 180 EMAVYRRPFPTPESRRPTLSWPRELPIDGEPADVVALVEEYAQWLATSDVPKLLINAEPGAILTTGAIRDWCR-SWPNQL 258 (295)
T ss_pred HHHHHHhhcCCchhhhhhhhhhhhcCCCCcchhhHhhhhHhHHHhccCCCCeEEEeccCCcccCcHHHHHHHH-Hhhhhc
Confidence 1111110000000 00000 00112344567777788999999944 4444444 678899
Q ss_pred ceeeecCCCccccccChhhHHHHHHhh
Q 025845 220 MSELINCSRRAFFLYHNTLFIQFVYVL 246 (247)
Q Consensus 220 ~~~~i~~~gH~~~~e~p~~~~~~v~~~ 246 (247)
++++++++||++++|+|++|++.|..+
T Consensus 259 ~~~~i~~~gH~~~~e~p~~v~~~i~~f 285 (295)
T PRK03592 259 EITVFGAGLHFAQEDSPEEIGAAIAAW 285 (295)
T ss_pred ceeeccCcchhhhhcCHHHHHHHHHHH
Confidence 999999999999999999999999875
No 8
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=3.2e-34 Score=229.67 Aligned_cols=231 Identities=13% Similarity=0.086 Sum_probs=150.8
Q ss_pred CCcEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCCcEEEEEEeh
Q 025845 8 EEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSL 87 (247)
Q Consensus 8 ~~~~iv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~lvGhS~ 87 (247)
++|+|||+||++++...|.++++.|++ +|+|+++|+||||.|+.+....++++++++++.++++++ +.++++||||||
T Consensus 87 ~gp~lvllHG~~~~~~~w~~~~~~L~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~a~~l~~~l~~l-~~~~~~lvGhS~ 164 (360)
T PLN02679 87 SGPPVLLVHGFGASIPHWRRNIGVLAK-NYTVYAIDLLGFGASDKPPGFSYTMETWAELILDFLEEV-VQKPTVLIGNSV 164 (360)
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCCCCccccHHHHHHHHHHHHHHh-cCCCeEEEEECH
Confidence 469999999999999999999999985 799999999999999876544589999999999999999 889999999999
Q ss_pred hHHHHHHHHH-hCCCccceEEEEeccCCCCCCC--hHHHHHH------HHHhh-c-----------CCCCcccccccccc
Q 025845 88 GGVTLALAAD-KFPHKISVAVFVTAFMPDTTHR--PSFVLEQ------YSEKM-G-----------KEDDSWLDTQFSQC 146 (247)
Q Consensus 88 Gg~ia~~~a~-~~p~~v~~lvl~~~~~~~~~~~--~~~~~~~------~~~~~-~-----------~~~~~~~~~~~~~~ 146 (247)
||.+++.++. .+|++|+++|++++........ ....... +...+ . ......+...+...
T Consensus 165 Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (360)
T PLN02679 165 GSLACVIAASESTRDLVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFLLKQRGIASALFNRVKQRDNLKNILLSV 244 (360)
T ss_pred HHHHHHHHHHhcChhhcCEEEEECCccccccccccchHHHhhhcchHHHHHHHhhchhhHHHHHHHhcCHHHHHHHHHHh
Confidence 9999999887 4799999999999853221111 0100000 00000 0 00000000000000
Q ss_pred cCCCCcccceeechhhHHHHHhcCCCcchhhhhhh----------hhcccchhHHhhhhhhccchhHHHHH-----HHHH
Q 025845 147 DASNPSHISMLFGREFLTIKIYQLCPPEVINLLRI----------TFIGRAIVLRQIVSYLYLDSDTMQIM-----LNFI 211 (247)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~l~~g~~D~~~p~~~-----~~~~ 211 (247)
... ......+....+............... ......+.++.++..|++|.++|... .+.+
T Consensus 245 ~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PtLii~G~~D~~~p~~~~~~~~~~~l 319 (360)
T PLN02679 245 YGN-----KEAVDDELVEIIRGPADDEGALDAFVSIVTGPPGPNPIKLIPRISLPILVLWGDQDPFTPLDGPVGKYFSSL 319 (360)
T ss_pred ccC-----cccCCHHHHHHHHhhccCCChHHHHHHHHhcCCCCCHHHHhhhcCCCEEEEEeCCCCCcCchhhHHHHHHhh
Confidence 000 001111221111111011111000000 01123345566667799999988763 2345
Q ss_pred HHhhcCCcceeeecCCCccccccChhhHHHHHHhh
Q 025845 212 IIIIITTHMSELINCSRRAFFLYHNTLFIQFVYVL 246 (247)
Q Consensus 212 ~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~v~~~ 246 (247)
. +.+|++++++++++||++++|+|++|++.|..+
T Consensus 320 ~-~~ip~~~l~~i~~aGH~~~~E~Pe~~~~~I~~F 353 (360)
T PLN02679 320 P-SQLPNVTLYVLEGVGHCPHDDRPDLVHEKLLPW 353 (360)
T ss_pred h-ccCCceEEEEcCCCCCCccccCHHHHHHHHHHH
Confidence 5 678999999999999999999999999999875
No 9
>PRK03204 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=1.2e-33 Score=219.90 Aligned_cols=233 Identities=9% Similarity=-0.028 Sum_probs=152.3
Q ss_pred CCCcEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCCcEEEEEEe
Q 025845 7 MEEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHS 86 (247)
Q Consensus 7 ~~~~~iv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~lvGhS 86 (247)
+++|+|||+||++.+...|..+++.|. ++|+|+++|+||||.|+.+....++.+++++++.++++++ +.++++++|||
T Consensus 32 G~~~~iv~lHG~~~~~~~~~~~~~~l~-~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~lvG~S 109 (286)
T PRK03204 32 GTGPPILLCHGNPTWSFLYRDIIVALR-DRFRCVAPDYLGFGLSERPSGFGYQIDEHARVIGEFVDHL-GLDRYLSMGQD 109 (286)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHHh-CCcEEEEECCCCCCCCCCCCccccCHHHHHHHHHHHHHHh-CCCCEEEEEEC
Confidence 357999999999999999999999998 4699999999999999876544578999999999999999 88999999999
Q ss_pred hhHHHHHHHHHhCCCccceEEEEeccCCCCCCChHHHHHHHHHhhcCCCCccccc--ccccccCCCCcccceeechhhHH
Q 025845 87 LGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDT--QFSQCDASNPSHISMLFGREFLT 164 (247)
Q Consensus 87 ~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 164 (247)
|||.+++.++.++|++|+++|++++...............+..... ....++.. .......... ......+...
T Consensus 110 ~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 185 (286)
T PRK03204 110 WGGPISMAVAVERADRVRGVVLGNTWFWPADTLAMKAFSRVMSSPP-VQYAILRRNFFVERLIPAGT---EHRPSSAVMA 185 (286)
T ss_pred ccHHHHHHHHHhChhheeEEEEECccccCCCchhHHHHHHHhcccc-chhhhhhhhHHHHHhccccc---cCCCCHHHHH
Confidence 9999999999999999999999877532111111111111110000 00000000 0000000000 0111111111
Q ss_pred HHHhcCCCcchhhh--------------hhhhh-ccc--chhHHhhhhhhccchhHHH-HHHHHHHHhhcCCcceeeecC
Q 025845 165 IKIYQLCPPEVINL--------------LRITF-IGR--AIVLRQIVSYLYLDSDTMQ-IMLNFIIIIIITTHMSELINC 226 (247)
Q Consensus 165 ~~~~~~~~~~~~~~--------------~~~~~-~~~--~~~~~~~l~~g~~D~~~p~-~~~~~~~~~~~~~~~~~~i~~ 226 (247)
.+.......+.... ...+. ... ....+.++..|++|.++++ ...+.+. +.+|+++++++++
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PtliI~G~~D~~~~~~~~~~~~~-~~ip~~~~~~i~~ 264 (286)
T PRK03204 186 HYRAVQPNAAARRGVAEMPKQILAARPLLARLAREVPATLGTKPTLLVWGMKDVAFRPKTILPRLR-ATFPDHVLVELPN 264 (286)
T ss_pred HhcCCCCCHHHHHHHHHHHHhcchhhHHHHHhhhhhhhhcCCCCeEEEecCCCcccCcHHHHHHHH-HhcCCCeEEEcCC
Confidence 11110000000000 00000 000 1156666777999998754 4567787 8999999999999
Q ss_pred CCccccccChhhHHHHHHhh
Q 025845 227 SRRAFFLYHNTLFIQFVYVL 246 (247)
Q Consensus 227 ~gH~~~~e~p~~~~~~v~~~ 246 (247)
+||++++|+|++|++.|.++
T Consensus 265 aGH~~~~e~Pe~~~~~i~~~ 284 (286)
T PRK03204 265 AKHFIQEDAPDRIAAAIIER 284 (286)
T ss_pred CcccccccCHHHHHHHHHHh
Confidence 99999999999999999875
No 10
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=100.00 E-value=7.2e-33 Score=225.30 Aligned_cols=235 Identities=14% Similarity=0.106 Sum_probs=151.2
Q ss_pred CCcEEEEEcCCCCChhhHHH-HHHHHHh---CCcEEEEecCCCCCCCCCcccCccCHHHhHHHHH-HHHHhCCCCCcEEE
Q 025845 8 EEKHFVLVHGVNHGAWCWYK-LKARLVA---GGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLM-EVLASLPAEEKVIL 82 (247)
Q Consensus 8 ~~~~iv~lhG~~~~~~~~~~-~~~~l~~---~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~-~~i~~l~~~~~~~l 82 (247)
.+|+|||+||++++...|.. +.+.|.+ ++|+|+++|+||||.|+.+....++++++++++. .+++.+ +.+++++
T Consensus 200 ~k~~VVLlHG~~~s~~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~~~ytl~~~a~~l~~~ll~~l-g~~k~~L 278 (481)
T PLN03087 200 AKEDVLFIHGFISSSAFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPADSLYTLREHLEMIERSVLERY-KVKSFHI 278 (481)
T ss_pred CCCeEEEECCCCccHHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCCCcCCHHHHHHHHHHHHHHHc-CCCCEEE
Confidence 35899999999999999985 4466652 5899999999999999877555589999999995 899999 8899999
Q ss_pred EEEehhHHHHHHHHHhCCCccceEEEEeccCCCCCCChHHHHHHHHHhhcCCCCcccc----ccc-cccc-CCCCcccce
Q 025845 83 VGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLD----TQF-SQCD-ASNPSHISM 156 (247)
Q Consensus 83 vGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~-~~~~~~~~~ 156 (247)
+||||||++++.+|.++|++|+++|+++++......... .......... ....|.. ... ..+. ....+....
T Consensus 279 VGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 356 (481)
T PLN03087 279 VAHSLGCILALALAVKHPGAVKSLTLLAPPYYPVPKGVQ-ATQYVMRKVA-PRRVWPPIAFGASVACWYEHISRTICLVI 356 (481)
T ss_pred EEECHHHHHHHHHHHhChHhccEEEEECCCccccccchh-HHHHHHHHhc-ccccCCccccchhHHHHHHHHHhhhhccc
Confidence 999999999999999999999999999975322211111 1111111100 0000000 000 0000 000000000
Q ss_pred eec---hhh---------HHHHH----hcCCCcchh-hh---hhh--------h-hcccchhHHhhhhhhccchhHHHHH
Q 025845 157 LFG---REF---------LTIKI----YQLCPPEVI-NL---LRI--------T-FIGRAIVLRQIVSYLYLDSDTMQIM 207 (247)
Q Consensus 157 ~~~---~~~---------~~~~~----~~~~~~~~~-~~---~~~--------~-~~~~~~~~~~~l~~g~~D~~~p~~~ 207 (247)
... .+. ....+ ......... .+ ... + .....++++.++..|++|.++|.+.
T Consensus 357 ~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~l~~l~~~I~vPtLII~Ge~D~ivP~~~ 436 (481)
T PLN03087 357 CKNHRLWEFLTRLLTRNRMRTFLIEGFFCHTHNAAWHTLHNIICGSGSKLDGYLDHVRDQLKCDVAIFHGGDDELIPVEC 436 (481)
T ss_pred ccchHHHHHHHHHhhhhhhhHHHHHHHHhccchhhHHHHHHHHhchhhhhhhHHHHHHHhCCCCEEEEEECCCCCCCHHH
Confidence 000 000 00000 000000000 00 000 0 0011345666677799999999999
Q ss_pred HHHHHHhhcCCcceeeecCCCccccc-cChhhHHHHHHhh
Q 025845 208 LNFIIIIIITTHMSELINCSRRAFFL-YHNTLFIQFVYVL 246 (247)
Q Consensus 208 ~~~~~~~~~~~~~~~~i~~~gH~~~~-e~p~~~~~~v~~~ 246 (247)
.+.++ +.+|++++++|+++||++++ |+|+.|++.|..+
T Consensus 437 ~~~la-~~iP~a~l~vI~~aGH~~~v~e~p~~fa~~L~~F 475 (481)
T PLN03087 437 SYAVK-AKVPRARVKVIDDKDHITIVVGRQKEFARELEEI 475 (481)
T ss_pred HHHHH-HhCCCCEEEEeCCCCCcchhhcCHHHHHHHHHHH
Confidence 99998 99999999999999999996 9999999998764
No 11
>PRK10673 acyl-CoA esterase; Provisional
Probab=100.00 E-value=1.5e-32 Score=210.88 Aligned_cols=227 Identities=15% Similarity=0.088 Sum_probs=155.3
Q ss_pred CCCCcEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCCcEEEEEE
Q 025845 6 GMEEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGH 85 (247)
Q Consensus 6 ~~~~~~iv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~lvGh 85 (247)
.+++|+|||+||++++...|..++..|.+ +|+|+++|+||||.|..+. .++++++++|+.++++++ +.++++|+||
T Consensus 13 ~~~~~~iv~lhG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~s~~~~--~~~~~~~~~d~~~~l~~l-~~~~~~lvGh 88 (255)
T PRK10673 13 PHNNSPIVLVHGLFGSLDNLGVLARDLVN-DHDIIQVDMRNHGLSPRDP--VMNYPAMAQDLLDTLDAL-QIEKATFIGH 88 (255)
T ss_pred CCCCCCEEEECCCCCchhHHHHHHHHHhh-CCeEEEECCCCCCCCCCCC--CCCHHHHHHHHHHHHHHc-CCCceEEEEE
Confidence 46789999999999999999999999984 7999999999999998754 379999999999999999 8889999999
Q ss_pred ehhHHHHHHHHHhCCCccceEEEEeccCCCCCCCh-HHHHHHHHHhhcCCCCcccccccccccCCCCcccceeechhhHH
Q 025845 86 SLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRP-SFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFLT 164 (247)
Q Consensus 86 S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (247)
||||.+++.+|.++|++|+++|++++......... ......+............. ..... ..........
T Consensus 89 S~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--------~~~~~~~~~~ 159 (255)
T PRK10673 89 SMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSEAGATTRQQ-AAAIM--------RQHLNEEGVI 159 (255)
T ss_pred CHHHHHHHHHHHhCHhhcceEEEEecCCCCccchhhHHHHHHHHHhhhcccccHHH-HHHHH--------HHhcCCHHHH
Confidence 99999999999999999999999986432221111 01111111100000000000 00000 0000000011
Q ss_pred HHHhcCCCcc-----h------hhhhhhhhcccchhHHhhhhhhccchhHHHHHHHHHHHhhcCCcceeeecCCCccccc
Q 025845 165 IKIYQLCPPE-----V------INLLRITFIGRAIVLRQIVSYLYLDSDTMQIMLNFIIIIIITTHMSELINCSRRAFFL 233 (247)
Q Consensus 165 ~~~~~~~~~~-----~------~~~~~~~~~~~~~~~~~~l~~g~~D~~~p~~~~~~~~~~~~~~~~~~~i~~~gH~~~~ 233 (247)
.......... . ............++.+.++..|++|..++.+..+.++ +.+|++++++++++||++++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~-~~~~~~~~~~~~~~gH~~~~ 238 (255)
T PRK10673 160 QFLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWPHPALFIRGGNSPYVTEAYRDDLL-AQFPQARAHVIAGAGHWVHA 238 (255)
T ss_pred HHHHhcCCcceeEeeHHHHHHhHHHHhCCcccCCCCCCeEEEECCCCCCCCHHHHHHHH-HhCCCcEEEEeCCCCCeeec
Confidence 1110000000 0 0000001123344567777789999999999999998 99999999999999999999
Q ss_pred cChhhHHHHHHhh
Q 025845 234 YHNTLFIQFVYVL 246 (247)
Q Consensus 234 e~p~~~~~~v~~~ 246 (247)
|+|++|++.|..+
T Consensus 239 ~~p~~~~~~l~~f 251 (255)
T PRK10673 239 EKPDAVLRAIRRY 251 (255)
T ss_pred cCHHHHHHHHHHH
Confidence 9999999998765
No 12
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=100.00 E-value=9.1e-33 Score=214.53 Aligned_cols=233 Identities=12% Similarity=0.041 Sum_probs=156.5
Q ss_pred CCCCCcEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCCcEEEEE
Q 025845 5 VGMEEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVG 84 (247)
Q Consensus 5 ~~~~~~~iv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~lvG 84 (247)
+..++|+|||+||++++...|..+++.|++ +|+|+++|+||||.|+.+....++++++++++.++++++ +.++++|+|
T Consensus 24 g~~~~~~vv~~hG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~~-~~~~~~lvG 101 (278)
T TIGR03056 24 GPTAGPLLLLLHGTGASTHSWRDLMPPLAR-SFRVVAPDLPGHGFTRAPFRFRFTLPSMAEDLSALCAAE-GLSPDGVIG 101 (278)
T ss_pred CCCCCCeEEEEcCCCCCHHHHHHHHHHHhh-CcEEEeecCCCCCCCCCccccCCCHHHHHHHHHHHHHHc-CCCCceEEE
Confidence 444579999999999999999999999984 699999999999999876654589999999999999999 788999999
Q ss_pred EehhHHHHHHHHHhCCCccceEEEEeccCCCCCCChHH---HHHHHHHhh----------cCCCCcccccccccccCCCC
Q 025845 85 HSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSF---VLEQYSEKM----------GKEDDSWLDTQFSQCDASNP 151 (247)
Q Consensus 85 hS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~---~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~ 151 (247)
|||||.+++.+|.++|++++++|++++........... ....+.... ......+ ...... ....
T Consensus 102 ~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~ 178 (278)
T TIGR03056 102 HSAGAAIALRLALDGPVTPRMVVGINAALMPFEGMAGTLFPYMARVLACNPFTPPMMSRGAADQQRV-ERLIRD--TGSL 178 (278)
T ss_pred ECccHHHHHHHHHhCCcccceEEEEcCcccccccccccccchhhHhhhhcccchHHHHhhcccCcch-hHHhhc--cccc
Confidence 99999999999999999999999998753321111000 000100000 0000000 000000 0000
Q ss_pred cccceeechhhHHHHHhcCCC-cchhhh------hhhhhcccchhHHhhhhhhccchhHHHHHHHHHHHhhcCCcceeee
Q 025845 152 SHISMLFGREFLTIKIYQLCP-PEVINL------LRITFIGRAIVLRQIVSYLYLDSDTMQIMLNFIIIIIITTHMSELI 224 (247)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~------~~~~~~~~~~~~~~~l~~g~~D~~~p~~~~~~~~~~~~~~~~~~~i 224 (247)
.................. ...... .........+.++..+..|++|.++|.+..+.+. +.+++++++++
T Consensus 179 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~g~~D~~vp~~~~~~~~-~~~~~~~~~~~ 254 (278)
T TIGR03056 179 ---LDKAGMTYYGRLIRSPAHVDGALSMMAQWDLAPLNRDLPRITIPLHLIAGEEDKAVPPDESKRAA-TRVPTATLHVV 254 (278)
T ss_pred ---cccchhhHHHHhhcCchhhhHHHHHhhcccccchhhhcccCCCCEEEEEeCCCcccCHHHHHHHH-HhccCCeEEEE
Confidence 000000011100000000 000000 0001123344566667779999999999999998 88999999999
Q ss_pred cCCCccccccChhhHHHHHHhh
Q 025845 225 NCSRRAFFLYHNTLFIQFVYVL 246 (247)
Q Consensus 225 ~~~gH~~~~e~p~~~~~~v~~~ 246 (247)
+++||++++|+|++|++.|..+
T Consensus 255 ~~~gH~~~~e~p~~~~~~i~~f 276 (278)
T TIGR03056 255 PGGGHLVHEEQADGVVGLILQA 276 (278)
T ss_pred CCCCCcccccCHHHHHHHHHHH
Confidence 9999999999999999999875
No 13
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=100.00 E-value=6.5e-33 Score=215.93 Aligned_cols=233 Identities=17% Similarity=0.100 Sum_probs=149.0
Q ss_pred CCCcEEEEEcCCCCChhhHHH---HHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCCcEEEE
Q 025845 7 MEEKHFVLVHGVNHGAWCWYK---LKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILV 83 (247)
Q Consensus 7 ~~~~~iv~lhG~~~~~~~~~~---~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~lv 83 (247)
+++|+|||+||++++...|.. .+..+.+.||+|+++|+||||.|+.+.........+++++.++++.+ +.++++++
T Consensus 28 g~~~~ivllHG~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l-~~~~~~lv 106 (282)
T TIGR03343 28 GNGEAVIMLHGGGPGAGGWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGLMDAL-DIEKAHLV 106 (282)
T ss_pred CCCCeEEEECCCCCchhhHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCcccccchhHHHHHHHHHHc-CCCCeeEE
Confidence 467899999999998888764 34556657899999999999999865422122225789999999999 89999999
Q ss_pred EEehhHHHHHHHHHhCCCccceEEEEeccCCCCC---CChHHHHHHHHHhhcCCCCcccccccccccCCCCcccceeech
Q 025845 84 GHSLGGVTLALAADKFPHKISVAVFVTAFMPDTT---HRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGR 160 (247)
Q Consensus 84 GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (247)
||||||.+++.+|.++|++|+++|++++...... .........+...................... ......
T Consensus 107 G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~ 181 (282)
T TIGR03343 107 GNSMGGATALNFALEYPDRIGKLILMGPGGLGPSLFAPMPMEGIKLLFKLYAEPSYETLKQMLNVFLFD-----QSLITE 181 (282)
T ss_pred EECchHHHHHHHHHhChHhhceEEEECCCCCCccccccCchHHHHHHHHHhcCCCHHHHHHHHhhCccC-----cccCcH
Confidence 9999999999999999999999999987522110 11101111221111000000000000000000 000011
Q ss_pred hhHHHHHhc-CCCcch-hh-----------hhhhhhcccchhHHhhhhhhccchhHHHHHHHHHHHhhcCCcceeeecCC
Q 025845 161 EFLTIKIYQ-LCPPEV-IN-----------LLRITFIGRAIVLRQIVSYLYLDSDTMQIMLNFIIIIIITTHMSELINCS 227 (247)
Q Consensus 161 ~~~~~~~~~-~~~~~~-~~-----------~~~~~~~~~~~~~~~~l~~g~~D~~~p~~~~~~~~~~~~~~~~~~~i~~~ 227 (247)
...+..+.. ...... .. ..........++++.++..|++|.++|....+.++ +.+|++++++++++
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlli~G~~D~~v~~~~~~~~~-~~~~~~~~~~i~~a 260 (282)
T TIGR03343 182 ELLQGRWENIQRQPEHLKNFLISSQKAPLSTWDVTARLGEIKAKTLVTWGRDDRFVPLDHGLKLL-WNMPDAQLHVFSRC 260 (282)
T ss_pred HHHHhHHHHhhcCHHHHHHHHHhccccccccchHHHHHhhCCCCEEEEEccCCCcCCchhHHHHH-HhCCCCEEEEeCCC
Confidence 111100000 000000 00 00001122344556666779999999999999998 89999999999999
Q ss_pred CccccccChhhHHHHHHhh
Q 025845 228 RRAFFLYHNTLFIQFVYVL 246 (247)
Q Consensus 228 gH~~~~e~p~~~~~~v~~~ 246 (247)
||++++|+|+.|++.|..+
T Consensus 261 gH~~~~e~p~~~~~~i~~f 279 (282)
T TIGR03343 261 GHWAQWEHADAFNRLVIDF 279 (282)
T ss_pred CcCCcccCHHHHHHHHHHH
Confidence 9999999999999999875
No 14
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=100.00 E-value=7.9e-33 Score=208.52 Aligned_cols=242 Identities=14% Similarity=0.116 Sum_probs=159.9
Q ss_pred CCCCCCcEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEecCCCCCCCCCccc-CccCHHHhHHHHHHHHHhCCCCCcEEE
Q 025845 4 VVGMEEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIE-DVHTFHAYSEPLMEVLASLPAEEKVIL 82 (247)
Q Consensus 4 ~~~~~~~~iv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~~l~~~i~~l~~~~~~~l 82 (247)
.+.+++|.|+|+||+..+...|+.+...|+.+||+|+|+|+||+|.|+.|.. +.|+++.++.|+..+|++| +.+++++
T Consensus 39 ~g~~~gP~illlHGfPe~wyswr~q~~~la~~~~rviA~DlrGyG~Sd~P~~~~~Yt~~~l~~di~~lld~L-g~~k~~l 117 (322)
T KOG4178|consen 39 GGPGDGPIVLLLHGFPESWYSWRHQIPGLASRGYRVIAPDLRGYGFSDAPPHISEYTIDELVGDIVALLDHL-GLKKAFL 117 (322)
T ss_pred ecCCCCCEEEEEccCCccchhhhhhhhhhhhcceEEEecCCCCCCCCCCCCCcceeeHHHHHHHHHHHHHHh-ccceeEE
Confidence 3667899999999999999999999999999999999999999999999886 6799999999999999999 8999999
Q ss_pred EEEehhHHHHHHHHHhCCCccceEEEEeccCCCCCCChHH-HHHHHHHhh-----cC--CCC---------ccccccccc
Q 025845 83 VGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSF-VLEQYSEKM-----GK--EDD---------SWLDTQFSQ 145 (247)
Q Consensus 83 vGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~-~~~~~~~~~-----~~--~~~---------~~~~~~~~~ 145 (247)
+||+||+++|+.+|..+|++|+++|.++.+...+...... ....+.... +. ..+ ......+..
T Consensus 118 vgHDwGaivaw~la~~~Perv~~lv~~nv~~~~p~~~~~~~~~~~f~~~~y~~~fQ~~~~~E~~~s~~~~~~~~~~~~~~ 197 (322)
T KOG4178|consen 118 VGHDWGAIVAWRLALFYPERVDGLVTLNVPFPNPKLKPLDSSKAIFGKSYYICLFQEPGKPETELSKDDTEMLVKTFRTR 197 (322)
T ss_pred EeccchhHHHHHHHHhChhhcceEEEecCCCCCcccchhhhhccccCccceeEeccccCcchhhhccchhHHhHHhhhcc
Confidence 9999999999999999999999999999865522221111 111111100 00 000 000000000
Q ss_pred ccCCCCc-c-----cceeechhhHHHHHhcCC---Ccchhhhhhhh--------hcccchhHHhhhhhhccchhHHHHHH
Q 025845 146 CDASNPS-H-----ISMLFGREFLTIKIYQLC---PPEVINLLRIT--------FIGRAIVLRQIVSYLYLDSDTMQIML 208 (247)
Q Consensus 146 ~~~~~~~-~-----~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~--------~~~~~~~~~~~l~~g~~D~~~p~~~~ 208 (247)
....-.+ + .......+.++-+..... .....+..+.+ .....+.++..+..|+.|.+.+....
T Consensus 198 ~~~~~~~~~~~~~~~~~w~t~edi~~~~~~f~~~g~~gplNyyrn~~r~w~a~~~~~~~i~iPv~fi~G~~D~v~~~p~~ 277 (322)
T KOG4178|consen 198 KTPGPLIVPKQPNENPLWLTEEDIAFYVSKFQIDGFTGPLNYYRNFRRNWEAAPWALAKITIPVLFIWGDLDPVLPYPIF 277 (322)
T ss_pred ccCCccccCCCCCCccchhhHHHHHHHHhccccccccccchhhHHHhhCchhccccccccccceEEEEecCcccccchhH
Confidence 0000000 0 000111222221111111 00011111111 12333445555556999999887743
Q ss_pred HHHHHhhcCCc-ceeeecCCCccccccChhhHHHHHHhh
Q 025845 209 NFIIIIIITTH-MSELINCSRRAFFLYHNTLFIQFVYVL 246 (247)
Q Consensus 209 ~~~~~~~~~~~-~~~~i~~~gH~~~~e~p~~~~~~v~~~ 246 (247)
.....+..|+. +.++++++||+++.|+|+++++.++.+
T Consensus 278 ~~~~rk~vp~l~~~vv~~~~gH~vqqe~p~~v~~~i~~f 316 (322)
T KOG4178|consen 278 GELYRKDVPRLTERVVIEGIGHFVQQEKPQEVNQAILGF 316 (322)
T ss_pred HHHHHHhhccccceEEecCCcccccccCHHHHHHHHHHH
Confidence 33332667776 799999999999999999999999875
No 15
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=100.00 E-value=1.5e-32 Score=210.59 Aligned_cols=235 Identities=12% Similarity=0.099 Sum_probs=155.7
Q ss_pred CCCcEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCCcEEEEEEe
Q 025845 7 MEEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHS 86 (247)
Q Consensus 7 ~~~~~iv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~lvGhS 86 (247)
.++|+|||+||++++...|..+++.|. ++|+|+++|+||||.|..+....++++++++++.++++.+ +.++++++|||
T Consensus 11 ~~~~~iv~lhG~~~~~~~~~~~~~~l~-~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~l~G~S 88 (257)
T TIGR03611 11 ADAPVVVLSSGLGGSGSYWAPQLDVLT-QRFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDAL-NIERFHFVGHA 88 (257)
T ss_pred CCCCEEEEEcCCCcchhHHHHHHHHHH-hccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHHh-CCCcEEEEEec
Confidence 457899999999999999999999898 5799999999999999876555689999999999999999 88999999999
Q ss_pred hhHHHHHHHHHhCCCccceEEEEeccCCCCCCChHHHHHHHHHhhc-CCCCcccccccccccCCCCc-ccceeechhhHH
Q 025845 87 LGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMG-KEDDSWLDTQFSQCDASNPS-HISMLFGREFLT 164 (247)
Q Consensus 87 ~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 164 (247)
|||.+++.++.++|++|+++|++++........ ..........+. .....+............-+ ...........
T Consensus 89 ~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 166 (257)
T TIGR03611 89 LGGLIGLQLALRYPERLLSLVLINAWSRPDPHT-RRCFDVRIALLQHAGPEAYVHAQALFLYPADWISENAARLAADEA- 166 (257)
T ss_pred hhHHHHHHHHHHChHHhHHheeecCCCCCChhH-HHHHHHHHHHHhccCcchhhhhhhhhhccccHhhccchhhhhhhh-
Confidence 999999999999999999999999753322111 111111111110 00111110000000000000 00000000000
Q ss_pred HHHhcCCCcch-hhhh------hhhhcccchhHHhhhhhhccchhHHHHHHHHHHHhhcCCcceeeecCCCccccccChh
Q 025845 165 IKIYQLCPPEV-INLL------RITFIGRAIVLRQIVSYLYLDSDTMQIMLNFIIIIIITTHMSELINCSRRAFFLYHNT 237 (247)
Q Consensus 165 ~~~~~~~~~~~-~~~~------~~~~~~~~~~~~~~l~~g~~D~~~p~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~ 237 (247)
........... .... ........+..+..+..|++|.++|.+....+. +.+++++++.++++||++++|+|+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~-~~~~~~~~~~~~~~gH~~~~~~~~ 245 (257)
T TIGR03611 167 HALAHFPGKANVLRRINALEAFDVSARLDRIQHPVLLIANRDDMLVPYTQSLRLA-AALPNAQLKLLPYGGHASNVTDPE 245 (257)
T ss_pred hcccccCccHHHHHHHHHHHcCCcHHHhcccCccEEEEecCcCcccCHHHHHHHH-HhcCCceEEEECCCCCCccccCHH
Confidence 00000000000 0000 001123344566667779999999999999888 889999999999999999999999
Q ss_pred hHHHHHHhh
Q 025845 238 LFIQFVYVL 246 (247)
Q Consensus 238 ~~~~~v~~~ 246 (247)
+|++.|..+
T Consensus 246 ~~~~~i~~f 254 (257)
T TIGR03611 246 TFNRALLDF 254 (257)
T ss_pred HHHHHHHHH
Confidence 999998865
No 16
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=100.00 E-value=2.1e-32 Score=208.17 Aligned_cols=226 Identities=18% Similarity=0.178 Sum_probs=145.6
Q ss_pred cEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCCcEEEEEEehhH
Q 025845 10 KHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGG 89 (247)
Q Consensus 10 ~~iv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~lvGhS~Gg 89 (247)
|+|||+||++++...|..+++.|. ++|+|+++|+||||.|+... .++++++++++.+.+ .++++++||||||
T Consensus 5 ~~iv~~HG~~~~~~~~~~~~~~l~-~~~~vi~~d~~G~G~s~~~~--~~~~~~~~~~~~~~~-----~~~~~lvG~S~Gg 76 (245)
T TIGR01738 5 VHLVLIHGWGMNAEVFRCLDEELS-AHFTLHLVDLPGHGRSRGFG--PLSLADAAEAIAAQA-----PDPAIWLGWSLGG 76 (245)
T ss_pred ceEEEEcCCCCchhhHHHHHHhhc-cCeEEEEecCCcCccCCCCC--CcCHHHHHHHHHHhC-----CCCeEEEEEcHHH
Confidence 899999999999999999999998 47999999999999997654 368888888776543 3689999999999
Q ss_pred HHHHHHHHhCCCccceEEEEeccCCCCCCC------hHHHHHHHHHhhcCCCCcccccccccccCCCCcccceeechhhH
Q 025845 90 VTLALAADKFPHKISVAVFVTAFMPDTTHR------PSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFL 163 (247)
Q Consensus 90 ~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (247)
.+++.+|.++|++++++|++++........ .......+...+.......+............ ........+
T Consensus 77 ~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 153 (245)
T TIGR01738 77 LVALHIAATHPDRVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDDYQRTIERFLALQTLGTP---TARQDARAL 153 (245)
T ss_pred HHHHHHHHHCHHhhheeeEecCCcccccCCcccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCC---ccchHHHHH
Confidence 999999999999999999998853221110 01112222211100000000000000000000 000000011
Q ss_pred HHHHhcCCCcchhhhhhhh---------hcccchhHHhhhhhhccchhHHHHHHHHHHHhhcCCcceeeecCCCcccccc
Q 025845 164 TIKIYQLCPPEVINLLRIT---------FIGRAIVLRQIVSYLYLDSDTMQIMLNFIIIIIITTHMSELINCSRRAFFLY 234 (247)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~l~~g~~D~~~p~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e 234 (247)
...+..............+ .....+..+..+..|++|.++|.+..+.+. +.++++++.++|++||++++|
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~-~~~~~~~~~~~~~~gH~~~~e 232 (245)
T TIGR01738 154 KQTLLARPTPNVQVLQAGLEILATVDLRQPLQNISVPFLRLYGYLDGLVPAKVVPYLD-KLAPHSELYIFAKAAHAPFLS 232 (245)
T ss_pred HHHhhccCCCCHHHHHHHHHHhhcccHHHHHhcCCCCEEEEeecCCcccCHHHHHHHH-HhCCCCeEEEeCCCCCCcccc
Confidence 1111111111000000000 112234455555669999999999999998 889999999999999999999
Q ss_pred ChhhHHHHHHhhC
Q 025845 235 HNTLFIQFVYVLC 247 (247)
Q Consensus 235 ~p~~~~~~v~~~~ 247 (247)
+|++|++.|.++.
T Consensus 233 ~p~~~~~~i~~fi 245 (245)
T TIGR01738 233 HAEAFCALLVAFK 245 (245)
T ss_pred CHHHHHHHHHhhC
Confidence 9999999998863
No 17
>PRK06489 hypothetical protein; Provisional
Probab=100.00 E-value=3e-32 Score=218.57 Aligned_cols=230 Identities=10% Similarity=0.115 Sum_probs=145.0
Q ss_pred CcEEEEEcCCCCChhhHH--HHHHHH--------HhCCcEEEEecCCCCCCCCCcccC------ccCHHHhHHHHHHHH-
Q 025845 9 EKHFVLVHGVNHGAWCWY--KLKARL--------VAGGHRVTAVDLAASGINMKRIED------VHTFHAYSEPLMEVL- 71 (247)
Q Consensus 9 ~~~iv~lhG~~~~~~~~~--~~~~~l--------~~~g~~vi~~D~~G~G~S~~~~~~------~~~~~~~~~~l~~~i- 71 (247)
+|+|||+||++++...|. .+.+.| + ++|+||++|+||||.|+.+... .++++++++++.+++
T Consensus 69 gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~-~~~~Via~Dl~GhG~S~~p~~~~~~~~~~~~~~~~a~~~~~~l~ 147 (360)
T PRK06489 69 DNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDA-SKYFIILPDGIGHGKSSKPSDGLRAAFPRYDYDDMVEAQYRLVT 147 (360)
T ss_pred CCeEEEeCCCCCchhhhccchhHHHhcCCCCcccc-cCCEEEEeCCCCCCCCCCCCcCCCCCCCcccHHHHHHHHHHHHH
Confidence 799999999999988886 555554 4 5799999999999999865431 479999999988854
Q ss_pred HhCCCCCcEE-EEEEehhHHHHHHHHHhCCCccceEEEEeccCCCCCCChHHHH-HHHHHhhcCCCCcccc---------
Q 025845 72 ASLPAEEKVI-LVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVL-EQYSEKMGKEDDSWLD--------- 140 (247)
Q Consensus 72 ~~l~~~~~~~-lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--------- 140 (247)
+++ ++++++ ++||||||++|+.+|.++|++|+++|++++...... ...... ........ ....+..
T Consensus 148 ~~l-gi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 224 (360)
T PRK06489 148 EGL-GVKHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQPTEMS-GRNWMWRRMLIESIR-NDPAWNNGNYTTQPPS 224 (360)
T ss_pred Hhc-CCCceeEEEEECHHHHHHHHHHHhCchhhheeeeeccCccccc-HHHHHHHHHHHHHHH-hCCCCCCCCCCCCHHH
Confidence 888 888885 899999999999999999999999999988532111 111111 11111110 0000000
Q ss_pred --cccccc---cCC-------CCcccceeechhhHHHHHhcCCCcchhhhhhhh---------hcccchhHHhhhhhhcc
Q 025845 141 --TQFSQC---DAS-------NPSHISMLFGREFLTIKIYQLCPPEVINLLRIT---------FIGRAIVLRQIVSYLYL 199 (247)
Q Consensus 141 --~~~~~~---~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~l~~g~~ 199 (247)
...... ... .. . ........+................... .....+.++.++..|++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~L~~I~~PvLvI~G~~ 302 (360)
T PRK06489 225 LKRANPMFAIATSGGTLAYQAQA-P-TRAAADKLVDERLAAPVTADANDFLYQWDSSRDYNPSPDLEKIKAPVLAINSAD 302 (360)
T ss_pred HHHHHHHHHHHHhCCHHHHHHhc-C-ChHHHHHHHHHHHHhhhhcCHHHHHHHHHHhhccChHHHHHhCCCCEEEEecCC
Confidence 000000 000 00 0 0000011111111111111010110001 11233445555666999
Q ss_pred chhHHHHHH--HHHHHhhcCCcceeeecCC----CccccccChhhHHHHHHhh
Q 025845 200 DSDTMQIML--NFIIIIIITTHMSELINCS----RRAFFLYHNTLFIQFVYVL 246 (247)
Q Consensus 200 D~~~p~~~~--~~~~~~~~~~~~~~~i~~~----gH~~~~e~p~~~~~~v~~~ 246 (247)
|.++|.+.. +.++ +.+|++++++||++ ||.++ |+|++|++.|..+
T Consensus 303 D~~~p~~~~~~~~la-~~ip~a~l~~i~~a~~~~GH~~~-e~P~~~~~~i~~F 353 (360)
T PRK06489 303 DERNPPETGVMEAAL-KRVKHGRLVLIPASPETRGHGTT-GSAKFWKAYLAEF 353 (360)
T ss_pred CcccChhhHHHHHHH-HhCcCCeEEEECCCCCCCCcccc-cCHHHHHHHHHHH
Confidence 999998875 6787 89999999999996 99997 8999999999765
No 18
>PLN02578 hydrolase
Probab=100.00 E-value=6.7e-32 Score=216.00 Aligned_cols=229 Identities=15% Similarity=0.145 Sum_probs=153.5
Q ss_pred CCCcEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCCcEEEEEEe
Q 025845 7 MEEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHS 86 (247)
Q Consensus 7 ~~~~~iv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~lvGhS 86 (247)
+++|||||+||++++...|..+++.|++ +|+|+++|+||||.|+.+.. .++.+.+++++.++++.+ ..++++++|||
T Consensus 84 g~g~~vvliHG~~~~~~~w~~~~~~l~~-~~~v~~~D~~G~G~S~~~~~-~~~~~~~a~~l~~~i~~~-~~~~~~lvG~S 160 (354)
T PLN02578 84 GEGLPIVLIHGFGASAFHWRYNIPELAK-KYKVYALDLLGFGWSDKALI-EYDAMVWRDQVADFVKEV-VKEPAVLVGNS 160 (354)
T ss_pred CCCCeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCccc-ccCHHHHHHHHHHHHHHh-ccCCeEEEEEC
Confidence 3678999999999999999999999984 69999999999999987754 479999999999999999 78999999999
Q ss_pred hhHHHHHHHHHhCCCccceEEEEeccCCCCCCCh----------HH----HHHHHHHhh----------cCCCCcccccc
Q 025845 87 LGGVTLALAADKFPHKISVAVFVTAFMPDTTHRP----------SF----VLEQYSEKM----------GKEDDSWLDTQ 142 (247)
Q Consensus 87 ~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~----------~~----~~~~~~~~~----------~~~~~~~~~~~ 142 (247)
|||.+++.+|.++|++|+++|++++......... .. ....+...+ .......+...
T Consensus 161 ~Gg~ia~~~A~~~p~~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (354)
T PLN02578 161 LGGFTALSTAVGYPELVAGVALLNSAGQFGSESREKEEAIVVEETVLTRFVVKPLKEWFQRVVLGFLFWQAKQPSRIESV 240 (354)
T ss_pred HHHHHHHHHHHhChHhcceEEEECCCccccccccccccccccccchhhHHHhHHHHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 9999999999999999999999987532111100 00 001100000 00000000000
Q ss_pred cccccCCCCcccceeechhhHHHHHh-cCCCcch----hhhhhh----------hhcccchhHHhhhhhhccchhHHHHH
Q 025845 143 FSQCDASNPSHISMLFGREFLTIKIY-QLCPPEV----INLLRI----------TFIGRAIVLRQIVSYLYLDSDTMQIM 207 (247)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~----~~~~~~----------~~~~~~~~~~~~l~~g~~D~~~p~~~ 207 (247)
......+ ..... +...+.+. ....... ...... ......++++..+..|++|.++|...
T Consensus 241 ~~~~~~~-----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~v~~~~ 314 (354)
T PLN02578 241 LKSVYKD-----KSNVD-DYLVESITEPAADPNAGEVYYRLMSRFLFNQSRYTLDSLLSKLSCPLLLLWGDLDPWVGPAK 314 (354)
T ss_pred HHHhcCC-----cccCC-HHHHHHHHhcccCCchHHHHHHHHHHHhcCCCCCCHHHHhhcCCCCEEEEEeCCCCCCCHHH
Confidence 0000000 00001 11111110 0000000 000000 01123345566666699999999999
Q ss_pred HHHHHHhhcCCcceeeecCCCccccccChhhHHHHHHhh
Q 025845 208 LNFIIIIIITTHMSELINCSRRAFFLYHNTLFIQFVYVL 246 (247)
Q Consensus 208 ~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~v~~~ 246 (247)
.+.++ +.+|+++++++ ++||++++|+|++|++.|.++
T Consensus 315 ~~~l~-~~~p~a~l~~i-~~GH~~~~e~p~~~~~~I~~f 351 (354)
T PLN02578 315 AEKIK-AFYPDTTLVNL-QAGHCPHDEVPEQVNKALLEW 351 (354)
T ss_pred HHHHH-HhCCCCEEEEe-CCCCCccccCHHHHHHHHHHH
Confidence 99998 88999999999 699999999999999999876
No 19
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=100.00 E-value=1e-31 Score=214.60 Aligned_cols=234 Identities=13% Similarity=0.059 Sum_probs=154.2
Q ss_pred CCCCCcEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEecCCCCCCCCCccc---CccCHHHhHHHHHHHHHhCCCCCcEE
Q 025845 5 VGMEEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIE---DVHTFHAYSEPLMEVLASLPAEEKVI 81 (247)
Q Consensus 5 ~~~~~~~iv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~---~~~~~~~~~~~l~~~i~~l~~~~~~~ 81 (247)
|..++|+|||+||++++...|+++++.|++ +|+|+++|+||||.|+.+.. ..++++++++++.++++++ +.++++
T Consensus 123 G~~~~~~ivllHG~~~~~~~w~~~~~~L~~-~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~~l~~~i~~l-~~~~~~ 200 (383)
T PLN03084 123 GSNNNPPVLLIHGFPSQAYSYRKVLPVLSK-NYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVSSLESLIDEL-KSDKVS 200 (383)
T ss_pred CCCCCCeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCCcccccccCCHHHHHHHHHHHHHHh-CCCCce
Confidence 444679999999999999999999999984 79999999999999987653 2479999999999999999 889999
Q ss_pred EEEEehhHHHHHHHHHhCCCccceEEEEeccCCCCCCChHHHHHHHHHhhcC--CCCcccccccccccCCCCcccceeec
Q 025845 82 LVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGK--EDDSWLDTQFSQCDASNPSHISMLFG 159 (247)
Q Consensus 82 lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (247)
|+|||+||++++.+|.++|++|+++|++++............+..+...... .....+........... .....
T Consensus 201 LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~~~~~~~p~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~----~~~~~ 276 (383)
T PLN03084 201 LVVQGYFSPPVVKYASAHPDKIKKLILLNPPLTKEHAKLPSTLSEFSNFLLGEIFSQDPLRASDKALTSCG----PYAMK 276 (383)
T ss_pred EEEECHHHHHHHHHHHhChHhhcEEEEECCCCccccccchHHHHHHHHHHhhhhhhcchHHHHhhhhcccC----ccCCC
Confidence 9999999999999999999999999999986432211111111111110000 00000000000000000 00001
Q ss_pred hhhHHHHHhcCCCc----------------ch---hhhhhhhhcccchhHHhhhhhhccchhHHHHHHHHHHHhhcCCcc
Q 025845 160 REFLTIKIYQLCPP----------------EV---INLLRITFIGRAIVLRQIVSYLYLDSDTMQIMLNFIIIIIITTHM 220 (247)
Q Consensus 160 ~~~~~~~~~~~~~~----------------~~---~~~~~~~~~~~~~~~~~~l~~g~~D~~~p~~~~~~~~~~~~~~~~ 220 (247)
.+....+....... .. ............+..+.++..|+.|.+++.+..+.++ +. ++++
T Consensus 277 ~e~~~~~~~~~~~~~~~~~~l~~~~r~~~~~l~~~~~~l~~~l~~~~i~vPvLiI~G~~D~~v~~~~~~~~a-~~-~~a~ 354 (383)
T PLN03084 277 EDDAMVYRRPYLTSGSSGFALNAISRSMKKELKKYIEEMRSILTDKNWKTPITVCWGLRDRWLNYDGVEDFC-KS-SQHK 354 (383)
T ss_pred HHHHHHHhccccCCcchHHHHHHHHHHhhcccchhhHHHHhhhccccCCCCEEEEeeCCCCCcCHHHHHHHH-Hh-cCCe
Confidence 11111110000000 00 0000000011234556667779999999999888887 55 5899
Q ss_pred eeeecCCCccccccChhhHHHHHHhh
Q 025845 221 SELINCSRRAFFLYHNTLFIQFVYVL 246 (247)
Q Consensus 221 ~~~i~~~gH~~~~e~p~~~~~~v~~~ 246 (247)
++++|++||++++|+|+++++.|..+
T Consensus 355 l~vIp~aGH~~~~E~Pe~v~~~I~~F 380 (383)
T PLN03084 355 LIELPMAGHHVQEDCGEELGGIISGI 380 (383)
T ss_pred EEEECCCCCCcchhCHHHHHHHHHHH
Confidence 99999999999999999999999765
No 20
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=100.00 E-value=7.7e-32 Score=205.36 Aligned_cols=218 Identities=14% Similarity=0.031 Sum_probs=139.5
Q ss_pred CcEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCCcEEEEEEehh
Q 025845 9 EKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLG 88 (247)
Q Consensus 9 ~~~iv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~lvGhS~G 88 (247)
+|+|||+||++++...|.++++.|+ +|+|+++|+||||.|+.+.. .+++++++++.++++.+ +.++++++|||||
T Consensus 2 ~p~vvllHG~~~~~~~w~~~~~~l~--~~~vi~~D~~G~G~S~~~~~--~~~~~~~~~l~~~l~~~-~~~~~~lvG~S~G 76 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDWQPVGEALP--DYPRLYIDLPGHGGSAAISV--DGFADVSRLLSQTLQSY-NILPYWLVGYSLG 76 (242)
T ss_pred CCEEEEECCCCCChHHHHHHHHHcC--CCCEEEecCCCCCCCCCccc--cCHHHHHHHHHHHHHHc-CCCCeEEEEECHH
Confidence 5899999999999999999999884 59999999999999987653 49999999999999999 8999999999999
Q ss_pred HHHHHHHHHhCCCc-cceEEEEeccCCCCCCChHHHHH-----HHHHhhc-CCCCcccccccccccCCCCcccceeechh
Q 025845 89 GVTLALAADKFPHK-ISVAVFVTAFMPDTTHRPSFVLE-----QYSEKMG-KEDDSWLDTQFSQCDASNPSHISMLFGRE 161 (247)
Q Consensus 89 g~ia~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~~~~-----~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (247)
|.+++.+|.++|++ |+++|++++...... ....... .+...+. .....++...+. ... .......
T Consensus 77 g~va~~~a~~~~~~~v~~lvl~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~---~~~~~~~ 148 (242)
T PRK11126 77 GRIAMYYACQGLAGGLCGLIVEGGNPGLQN-AEERQARWQNDRQWAQRFRQEPLEQVLADWYQ----QPV---FASLNAE 148 (242)
T ss_pred HHHHHHHHHhCCcccccEEEEeCCCCCCCC-HHHHHHHHhhhHHHHHHhccCcHHHHHHHHHh----cch---hhccCcc
Confidence 99999999999764 999999887532211 1110110 0111110 000000000000 000 0001111
Q ss_pred hHHHHHhcCCCc---chhhhhh---------hhhcccchhHHhhhhhhccchhHHHHHHHHHHHhhcCCcceeeecCCCc
Q 025845 162 FLTIKIYQLCPP---EVINLLR---------ITFIGRAIVLRQIVSYLYLDSDTMQIMLNFIIIIIITTHMSELINCSRR 229 (247)
Q Consensus 162 ~~~~~~~~~~~~---~~~~~~~---------~~~~~~~~~~~~~l~~g~~D~~~p~~~~~~~~~~~~~~~~~~~i~~~gH 229 (247)
............ ....... .......++++..+..|++|..+. .++ .. .++++++++++||
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-----~~~-~~-~~~~~~~i~~~gH 221 (242)
T PRK11126 149 QRQQLVAKRSNNNGAAVAAMLEATSLAKQPDLRPALQALTFPFYYLCGERDSKFQ-----ALA-QQ-LALPLHVIPNAGH 221 (242)
T ss_pred HHHHHHHhcccCCHHHHHHHHHhcCcccCCcHHHHhhccCCCeEEEEeCCcchHH-----HHH-HH-hcCeEEEeCCCCC
Confidence 111111100000 0000000 011223345566666699998653 232 22 4799999999999
Q ss_pred cccccChhhHHHHHHhh
Q 025845 230 AFFLYHNTLFIQFVYVL 246 (247)
Q Consensus 230 ~~~~e~p~~~~~~v~~~ 246 (247)
++++|+|++|++.|..+
T Consensus 222 ~~~~e~p~~~~~~i~~f 238 (242)
T PRK11126 222 NAHRENPAAFAASLAQI 238 (242)
T ss_pred chhhhChHHHHHHHHHH
Confidence 99999999999999765
No 21
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=100.00 E-value=4.5e-33 Score=209.22 Aligned_cols=216 Identities=19% Similarity=0.183 Sum_probs=147.5
Q ss_pred EEEEcCCCCChhhHHHHHHHHHhCCcEEEEecCCCCCCCCCccc-CccCHHHhHHHHHHHHHhCCCCCcEEEEEEehhHH
Q 025845 12 FVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIE-DVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGV 90 (247)
Q Consensus 12 iv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~~l~~~i~~l~~~~~~~lvGhS~Gg~ 90 (247)
|||+||++++...|.++++.|+ +||+|+++|+||+|.|+.+.. ..++++++++++.++++++ +.++++++|||+||.
T Consensus 1 vv~~hG~~~~~~~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~lvG~S~Gg~ 78 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAEALA-RGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDAL-GIKKVILVGHSMGGM 78 (228)
T ss_dssp EEEE-STTTTGGGGHHHHHHHH-TTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHT-TTSSEEEEEETHHHH
T ss_pred eEEECCCCCCHHHHHHHHHHHh-CCCEEEEEecCCccccccccccCCcchhhhhhhhhhccccc-ccccccccccccccc
Confidence 7999999999999999999996 799999999999999988763 3579999999999999999 779999999999999
Q ss_pred HHHHHHHhCCCccceEEEEeccCCCCCCC----hHHHHHHHHHhhcCCCCcccccccccccCCCCcccceeechhhHHHH
Q 025845 91 TLALAADKFPHKISVAVFVTAFMPDTTHR----PSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFLTIK 166 (247)
Q Consensus 91 ia~~~a~~~p~~v~~lvl~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (247)
+++.++.++|++|+++|++++........ .......+..........+....+. ...........
T Consensus 79 ~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~ 147 (228)
T PF12697_consen 79 IALRLAARYPDRVKGLVLLSPPPPLPDSPSRSFGPSFIRRLLAWRSRSLRRLASRFFY-----------RWFDGDEPEDL 147 (228)
T ss_dssp HHHHHHHHSGGGEEEEEEESESSSHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------HHHTHHHHHHH
T ss_pred cccccccccccccccceeecccccccccccccccchhhhhhhhccccccccccccccc-----------ccccccccccc
Confidence 99999999999999999999974321110 0111111111100000000000000 00011111111
Q ss_pred HhcCCCcch-------hhhhhhhhcccchhHHhhhhhhccchhHHHHHHHHHHHhhcCCcceeeecCCCccccccChhhH
Q 025845 167 IYQLCPPEV-------INLLRITFIGRAIVLRQIVSYLYLDSDTMQIMLNFIIIIIITTHMSELINCSRRAFFLYHNTLF 239 (247)
Q Consensus 167 ~~~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~g~~D~~~p~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~ 239 (247)
... ..... .............+.+..+..|+.|.++|.+..+.+. +..++++++++|++||++++|+|++|
T Consensus 148 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~pvl~i~g~~D~~~~~~~~~~~~-~~~~~~~~~~~~~~gH~~~~~~p~~~ 225 (228)
T PF12697_consen 148 IRS-SRRALAEYLRSNLWQADLSEALPRIKVPVLVIHGEDDPIVPPESAEELA-DKLPNAELVVIPGAGHFLFLEQPDEV 225 (228)
T ss_dssp HHH-HHHHHHHHHHHHHHHHHHHHHHHGSSSEEEEEEETTSSSSHHHHHHHHH-HHSTTEEEEEETTSSSTHHHHSHHHH
T ss_pred ccc-cccccccccccccccccccccccccCCCeEEeecCCCCCCCHHHHHHHH-HHCCCCEEEEECCCCCccHHHCHHHH
Confidence 111 00000 0000011122233445555569999999999999998 88999999999999999999999999
Q ss_pred HHH
Q 025845 240 IQF 242 (247)
Q Consensus 240 ~~~ 242 (247)
+++
T Consensus 226 ~~a 228 (228)
T PF12697_consen 226 AEA 228 (228)
T ss_dssp HHH
T ss_pred hcC
Confidence 874
No 22
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.97 E-value=6.1e-31 Score=198.98 Aligned_cols=238 Identities=18% Similarity=0.176 Sum_probs=150.5
Q ss_pred CCCcEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEecCCCCCCCCCccc---CccCHHHhHHHHHHHHHhCCCCCcEEEE
Q 025845 7 MEEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIE---DVHTFHAYSEPLMEVLASLPAEEKVILV 83 (247)
Q Consensus 7 ~~~~~iv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~---~~~~~~~~~~~l~~~i~~l~~~~~~~lv 83 (247)
.++.|+||+||+|++...|-...+.|++ .++|+++|++|+|+|+.|.- ..-....+++.+++..... ++++.+|+
T Consensus 88 ~~~~plVliHGyGAg~g~f~~Nf~~La~-~~~vyaiDllG~G~SSRP~F~~d~~~~e~~fvesiE~WR~~~-~L~Kmilv 165 (365)
T KOG4409|consen 88 ANKTPLVLIHGYGAGLGLFFRNFDDLAK-IRNVYAIDLLGFGRSSRPKFSIDPTTAEKEFVESIEQWRKKM-GLEKMILV 165 (365)
T ss_pred cCCCcEEEEeccchhHHHHHHhhhhhhh-cCceEEecccCCCCCCCCCCCCCcccchHHHHHHHHHHHHHc-CCcceeEe
Confidence 5678999999999999999999999996 79999999999999998762 2235568899999999999 99999999
Q ss_pred EEehhHHHHHHHHHhCCCccceEEEEeccCCCCCC---------ChHHH--HHHHHHhh-----cCCCCccccccccccc
Q 025845 84 GHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTH---------RPSFV--LEQYSEKM-----GKEDDSWLDTQFSQCD 147 (247)
Q Consensus 84 GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~---------~~~~~--~~~~~~~~-----~~~~~~~~~~~~~~~~ 147 (247)
|||+||++|..||.+||++|++|||++|..-.... ...+. .......+ ......+-+.....+.
T Consensus 166 GHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~~~~~~~~~~~~~~~w~~~~~~~~~~~nPl~~LR~~Gp~Gp~Lv~~~~ 245 (365)
T KOG4409|consen 166 GHSFGGYLAAKYALKYPERVEKLILVSPWGFPEKPDSEPEFTKPPPEWYKALFLVATNFNPLALLRLMGPLGPKLVSRLR 245 (365)
T ss_pred eccchHHHHHHHHHhChHhhceEEEecccccccCCCcchhhcCCChHHHhhhhhhhhcCCHHHHHHhccccchHHHhhhh
Confidence 99999999999999999999999999996433322 11111 00000000 0001111111111111
Q ss_pred CCCCcccceeechhhHHHHHhcCC--Ccchhhhhhhhhcccch--------------hHHhhhhhhccchhHHHHHHHHH
Q 025845 148 ASNPSHISMLFGREFLTIKIYQLC--PPEVINLLRITFIGRAI--------------VLRQIVSYLYLDSDTMQIMLNFI 211 (247)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~--------------~~~~~l~~g~~D~~~p~~~~~~~ 211 (247)
++.-.........+.+-++++... .+........+...... +++..+..|++|= +.......+
T Consensus 246 ~d~~~k~~~~~~ed~l~~YiY~~n~~~psgE~~fk~l~~~~g~Ar~Pm~~r~~~l~~~~pv~fiyG~~dW-mD~~~g~~~ 324 (365)
T KOG4409|consen 246 PDRFRKFPSLIEEDFLHEYIYHCNAQNPSGETAFKNLFEPGGWARRPMIQRLRELKKDVPVTFIYGDRDW-MDKNAGLEV 324 (365)
T ss_pred HHHHHhccccchhHHHHHHHHHhcCCCCcHHHHHHHHHhccchhhhhHHHHHHhhccCCCEEEEecCccc-ccchhHHHH
Confidence 000000022234444455554432 22222222222211111 2333333376553 334444444
Q ss_pred HHh-hcCCcceeeecCCCccccccChhhHHHHHHhhC
Q 025845 212 III-IITTHMSELINCSRRAFFLYHNTLFIQFVYVLC 247 (247)
Q Consensus 212 ~~~-~~~~~~~~~i~~~gH~~~~e~p~~~~~~v~~~~ 247 (247)
... ....++.++||+|||..++++|+.|++.|+.-|
T Consensus 325 ~~~~~~~~~~~~~v~~aGHhvylDnp~~Fn~~v~~~~ 361 (365)
T KOG4409|consen 325 TKSLMKEYVEIIIVPGAGHHVYLDNPEFFNQIVLEEC 361 (365)
T ss_pred HHHhhcccceEEEecCCCceeecCCHHHHHHHHHHHH
Confidence 311 235689999999999999999999999998876
No 23
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.97 E-value=9.1e-31 Score=209.36 Aligned_cols=226 Identities=13% Similarity=0.121 Sum_probs=145.4
Q ss_pred CCCcEEEEEcCCCCChhh-HHHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCC------Cc
Q 025845 7 MEEKHFVLVHGVNHGAWC-WYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAE------EK 79 (247)
Q Consensus 7 ~~~~~iv~lhG~~~~~~~-~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~------~~ 79 (247)
..+++|||+||++++... |..++..|+++||+|+++|+||||.|+.+.....+++++++|+.++++.+ .. .+
T Consensus 85 ~~~~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~dv~~~l~~l-~~~~~~~~~~ 163 (349)
T PLN02385 85 RPKAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYPGFGLSEGLHGYIPSFDDLVDDVIEHYSKI-KGNPEFRGLP 163 (349)
T ss_pred CCCeEEEEECCCCCccchHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHH-HhccccCCCC
Confidence 346789999999988764 68999999878999999999999999876543458999999999999877 32 37
Q ss_pred EEEEEEehhHHHHHHHHHhCCCccceEEEEeccCCCCCC-ChHHHHHHHHHhhcCCCCc--cccc-ccccccCCCCcccc
Q 025845 80 VILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTH-RPSFVLEQYSEKMGKEDDS--WLDT-QFSQCDASNPSHIS 155 (247)
Q Consensus 80 ~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~ 155 (247)
++|+||||||++++.++.++|++|+++|++++....... ........+...+...... +... .+... . .
T Consensus 164 ~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~----~---~ 236 (349)
T PLN02385 164 SFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIADDVVPPPLVLQILILLANLLPKAKLVPQKDLAEL----A---F 236 (349)
T ss_pred EEEEEeccchHHHHHHHHhCcchhhheeEecccccccccccCchHHHHHHHHHHHHCCCceecCCCccccc----c---c
Confidence 999999999999999999999999999999985332111 1111111111111000000 0000 00000 0 0
Q ss_pred eeechhhHHHHH-hcCCC-cch---hhhh----hhhhcccchhHHhhhhhhccchhHHHHHHHHHHHhhc--CCcceeee
Q 025845 156 MLFGREFLTIKI-YQLCP-PEV---INLL----RITFIGRAIVLRQIVSYLYLDSDTMQIMLNFIIIIII--TTHMSELI 224 (247)
Q Consensus 156 ~~~~~~~~~~~~-~~~~~-~~~---~~~~----~~~~~~~~~~~~~~l~~g~~D~~~p~~~~~~~~~~~~--~~~~~~~i 224 (247)
..........+. ..... ... .... ........+.++.++..|++|.++|....+.+. +.+ ++.+++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~i~~P~Lii~G~~D~vv~~~~~~~l~-~~~~~~~~~l~~i 315 (349)
T PLN02385 237 RDLKKRKMAEYNVIAYKDKPRLRTAVELLRTTQEIEMQLEEVSLPLLILHGEADKVTDPSVSKFLY-EKASSSDKKLKLY 315 (349)
T ss_pred cCHHHHHHhhcCcceeCCCcchHHHHHHHHHHHHHHHhcccCCCCEEEEEeCCCCccChHHHHHHH-HHcCCCCceEEEe
Confidence 000000000000 00000 000 0000 011123456677777889999999999999987 665 57899999
Q ss_pred cCCCccccccChhhHHH
Q 025845 225 NCSRRAFFLYHNTLFIQ 241 (247)
Q Consensus 225 ~~~gH~~~~e~p~~~~~ 241 (247)
|++||.+++|+|+++.+
T Consensus 316 ~~~gH~l~~e~p~~~~~ 332 (349)
T PLN02385 316 EDAYHSILEGEPDEMIF 332 (349)
T ss_pred CCCeeecccCCChhhHH
Confidence 99999999999998433
No 24
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.97 E-value=4e-31 Score=206.85 Aligned_cols=234 Identities=15% Similarity=0.122 Sum_probs=154.6
Q ss_pred CCCcEEEEEcCCCCChhhHHHHHHHHHhC-CcEEEEecCCCCCCC-CCcccCccCHHHhHHHHHHHHHhCCCCCcEEEEE
Q 025845 7 MEEKHFVLVHGVNHGAWCWYKLKARLVAG-GHRVTAVDLAASGIN-MKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVG 84 (247)
Q Consensus 7 ~~~~~iv~lhG~~~~~~~~~~~~~~l~~~-g~~vi~~D~~G~G~S-~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~lvG 84 (247)
.++++||++|||+++...|+.+...|.+. |++|+++|++|+|.| ..+....|+..++++.+..++... ..++++++|
T Consensus 56 ~~~~pvlllHGF~~~~~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~~~~~y~~~~~v~~i~~~~~~~-~~~~~~lvg 134 (326)
T KOG1454|consen 56 KDKPPVLLLHGFGASSFSWRRVVPLLSKAKGLRVLAIDLPGHGYSSPLPRGPLYTLRELVELIRRFVKEV-FVEPVSLVG 134 (326)
T ss_pred CCCCcEEEeccccCCcccHhhhccccccccceEEEEEecCCCCcCCCCCCCCceehhHHHHHHHHHHHhh-cCcceEEEE
Confidence 47899999999999999999999999863 399999999999944 445555699999999999999999 788899999
Q ss_pred EehhHHHHHHHHHhCCCccceEE---EEeccCCCCCCChHHH---HHHHHHhhcCCCCcccccccc-----ccc-CCCCc
Q 025845 85 HSLGGVTLALAADKFPHKISVAV---FVTAFMPDTTHRPSFV---LEQYSEKMGKEDDSWLDTQFS-----QCD-ASNPS 152 (247)
Q Consensus 85 hS~Gg~ia~~~a~~~p~~v~~lv---l~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~-----~~~-~~~~~ 152 (247)
||+||.+|..+|..+|+.|+++| ++++............ ...+.... ..+...... ... ....+
T Consensus 135 hS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~p~~~~~~~~~~~~~~~~~~ 210 (326)
T KOG1454|consen 135 HSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPKGIKGLRRLLDKFLSAL----ELLIPLSLTEPVRLVSEGLLRCL 210 (326)
T ss_pred eCcHHHHHHHHHHhCcccccceeeecccccccccCCcchhHHHHhhhhhccHh----hhcCccccccchhheeHhhhcce
Confidence 99999999999999999999999 5555433322222211 11111111 111100000 000 00000
Q ss_pred ---ccceeechhhHHHHHhc--------CCCcchhhh-----hhhhhcccc-hhHHhhhhhhccchhHHHHHHHHHHHhh
Q 025845 153 ---HISMLFGREFLTIKIYQ--------LCPPEVINL-----LRITFIGRA-IVLRQIVSYLYLDSDTMQIMLNFIIIII 215 (247)
Q Consensus 153 ---~~~~~~~~~~~~~~~~~--------~~~~~~~~~-----~~~~~~~~~-~~~~~~l~~g~~D~~~p~~~~~~~~~~~ 215 (247)
........+...+.... ....+.... ......... .+.+..+..|+.|.++|.+.+..+. +.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pvlii~G~~D~~~p~~~~~~~~-~~ 289 (326)
T KOG1454|consen 211 KVVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLGFDENLLSLIKKIWKCPVLIIWGDKDQIVPLELAEELK-KK 289 (326)
T ss_pred eeeccccccchhhhhhheecccccchhhhheeeEEEeccCccchHHHhhccccCCceEEEEcCcCCccCHHHHHHHH-hh
Confidence 00111111111111111 000000000 011111122 2256667779999999999999998 77
Q ss_pred cCCcceeeecCCCccccccChhhHHHHHHhh
Q 025845 216 ITTHMSELINCSRRAFFLYHNTLFIQFVYVL 246 (247)
Q Consensus 216 ~~~~~~~~i~~~gH~~~~e~p~~~~~~v~~~ 246 (247)
+|++++++|+++||.+++|.|++|++.|..+
T Consensus 290 ~pn~~~~~I~~~gH~~h~e~Pe~~~~~i~~F 320 (326)
T KOG1454|consen 290 LPNAELVEIPGAGHLPHLERPEEVAALLRSF 320 (326)
T ss_pred CCCceEEEeCCCCcccccCCHHHHHHHHHHH
Confidence 8999999999999999999999999998765
No 25
>PHA02857 monoglyceride lipase; Provisional
Probab=99.97 E-value=4.7e-30 Score=199.26 Aligned_cols=227 Identities=11% Similarity=0.071 Sum_probs=145.1
Q ss_pred CCcEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhC---CCCCcEEEEE
Q 025845 8 EEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASL---PAEEKVILVG 84 (247)
Q Consensus 8 ~~~~iv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l---~~~~~~~lvG 84 (247)
..+.|+++||++++...|..+++.|.++||+|+++|+||||.|+.......++.++++|+.+.++.+ ...++++|+|
T Consensus 24 ~~~~v~llHG~~~~~~~~~~~~~~l~~~g~~via~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~lvG 103 (276)
T PHA02857 24 PKALVFISHGAGEHSGRYEELAENISSLGILVFSHDHIGHGRSNGEKMMIDDFGVYVRDVVQHVVTIKSTYPGVPVFLLG 103 (276)
T ss_pred CCEEEEEeCCCccccchHHHHHHHHHhCCCEEEEccCCCCCCCCCccCCcCCHHHHHHHHHHHHHHHHhhCCCCCEEEEE
Confidence 3456777799999999999999999888999999999999999865433346677777877777654 1346899999
Q ss_pred EehhHHHHHHHHHhCCCccceEEEEeccCCCCCCChHHHHHHH-HHhhcCCCCcccccccccccCCCCcccceeechhhH
Q 025845 85 HSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQY-SEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFL 163 (247)
Q Consensus 85 hS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (247)
|||||.+|+.+|.++|++++++|++++............+... .... ........ . ... .........
T Consensus 104 ~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~---~~~-----~~~~~~~~~ 172 (276)
T PHA02857 104 HSMGATISILAAYKNPNLFTAMILMSPLVNAEAVPRLNLLAAKLMGIF--YPNKIVGK-L---CPE-----SVSRDMDEV 172 (276)
T ss_pred cCchHHHHHHHHHhCccccceEEEeccccccccccHHHHHHHHHHHHh--CCCCccCC-C---CHh-----hccCCHHHH
Confidence 9999999999999999999999999986432111111111111 1111 00000000 0 000 000000001
Q ss_pred HHHHhcCCC-c--chh----hh----hhhhhcccchhHHhhhhhhccchhHHHHHHHHHHHhhc-CCcceeeecCCCccc
Q 025845 164 TIKIYQLCP-P--EVI----NL----LRITFIGRAIVLRQIVSYLYLDSDTMQIMLNFIIIIII-TTHMSELINCSRRAF 231 (247)
Q Consensus 164 ~~~~~~~~~-~--~~~----~~----~~~~~~~~~~~~~~~l~~g~~D~~~p~~~~~~~~~~~~-~~~~~~~i~~~gH~~ 231 (247)
..+..+... . ... .. .........++++.++..|++|.++|.+....+. +.+ +++++.+++++||.+
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~l~-~~~~~~~~~~~~~~~gH~~ 251 (276)
T PHA02857 173 YKYQYDPLVNHEKIKAGFASQVLKATNKVRKIIPKIKTPILILQGTNNEISDVSGAYYFM-QHANCNREIKIYEGAKHHL 251 (276)
T ss_pred HHHhcCCCccCCCccHHHHHHHHHHHHHHHHhcccCCCCEEEEecCCCCcCChHHHHHHH-HHccCCceEEEeCCCcccc
Confidence 111111000 0 000 00 0011223455677777779999999999999987 655 578999999999999
Q ss_pred cccCh---hhHHHHHHhh
Q 025845 232 FLYHN---TLFIQFVYVL 246 (247)
Q Consensus 232 ~~e~p---~~~~~~v~~~ 246 (247)
+.|+| +++.+.+++|
T Consensus 252 ~~e~~~~~~~~~~~~~~~ 269 (276)
T PHA02857 252 HKETDEVKKSVMKEIETW 269 (276)
T ss_pred cCCchhHHHHHHHHHHHH
Confidence 99987 4566666665
No 26
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.97 E-value=1.4e-30 Score=198.59 Aligned_cols=232 Identities=13% Similarity=0.072 Sum_probs=151.9
Q ss_pred CCcEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCCcEEEEEEeh
Q 025845 8 EEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSL 87 (247)
Q Consensus 8 ~~~~iv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~lvGhS~ 87 (247)
++|+|||+||++.+...|.++++.|. ++|+|+++|+||||.|+.+.. .++++++++++.++++.+ +.++++++||||
T Consensus 12 ~~~~li~~hg~~~~~~~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~-~~~~~~~~~~~~~~i~~~-~~~~v~liG~S~ 88 (251)
T TIGR02427 12 GAPVLVFINSLGTDLRMWDPVLPALT-PDFRVLRYDKRGHGLSDAPEG-PYSIEDLADDVLALLDHL-GIERAVFCGLSL 88 (251)
T ss_pred CCCeEEEEcCcccchhhHHHHHHHhh-cccEEEEecCCCCCCCCCCCC-CCCHHHHHHHHHHHHHHh-CCCceEEEEeCc
Confidence 57899999999999999999999998 589999999999999976543 479999999999999999 788999999999
Q ss_pred hHHHHHHHHHhCCCccceEEEEeccCCCCCCChHHHHHHHHHhhcCCCCcccccccccccCCCCcccceeechhhHHHHH
Q 025845 88 GGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFLTIKI 167 (247)
Q Consensus 88 Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (247)
||++++.+|.++|++|+++|++++........ . ....+........................ ........+.....+
T Consensus 89 Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 165 (251)
T TIGR02427 89 GGLIAQGLAARRPDRVRALVLSNTAAKIGTPE-S-WNARIAAVRAEGLAALADAVLERWFTPGF-REAHPARLDLYRNML 165 (251)
T ss_pred hHHHHHHHHHHCHHHhHHHhhccCccccCchh-h-HHHHHhhhhhccHHHHHHHHHHHHccccc-ccCChHHHHHHHHHH
Confidence 99999999999999999999998753221111 1 11110000000000000000000000000 000000000111111
Q ss_pred hcCCCcchhhhhh------hhhcccchhHHhhhhhhccchhHHHHHHHHHHHhhcCCcceeeecCCCccccccChhhHHH
Q 025845 168 YQLCPPEVINLLR------ITFIGRAIVLRQIVSYLYLDSDTMQIMLNFIIIIIITTHMSELINCSRRAFFLYHNTLFIQ 241 (247)
Q Consensus 168 ~~~~~~~~~~~~~------~~~~~~~~~~~~~l~~g~~D~~~p~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~ 241 (247)
............. ..........+..+..|++|.++|.+....+. +..++.++++++++||++++|+|+++++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~g~~D~~~~~~~~~~~~-~~~~~~~~~~~~~~gH~~~~~~p~~~~~ 244 (251)
T TIGR02427 166 VRQPPDGYAGCCAAIRDADFRDRLGAIAVPTLCIAGDQDGSTPPELVREIA-DLVPGARFAEIRGAGHIPCVEQPEAFNA 244 (251)
T ss_pred HhcCHHHHHHHHHHHhcccHHHHhhhcCCCeEEEEeccCCcCChHHHHHHH-HhCCCceEEEECCCCCcccccChHHHHH
Confidence 1110000000000 00112233455556669999999999888888 8889999999999999999999999999
Q ss_pred HHHhh
Q 025845 242 FVYVL 246 (247)
Q Consensus 242 ~v~~~ 246 (247)
.|..+
T Consensus 245 ~i~~f 249 (251)
T TIGR02427 245 ALRDF 249 (251)
T ss_pred HHHHH
Confidence 98765
No 27
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.97 E-value=5e-30 Score=207.56 Aligned_cols=238 Identities=16% Similarity=0.094 Sum_probs=144.0
Q ss_pred CCCCcEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCccC----HHHhHHHHHHHHHhCCCCCcEE
Q 025845 6 GMEEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHT----FHAYSEPLMEVLASLPAEEKVI 81 (247)
Q Consensus 6 ~~~~~~iv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~----~~~~~~~l~~~i~~l~~~~~~~ 81 (247)
+.++|+|||+||++++...|...+..|++ +|+|+++|+||||.|+.+.....+ .+.+++++.++++.+ +.++++
T Consensus 102 ~~~~p~vvllHG~~~~~~~~~~~~~~L~~-~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~l-~~~~~~ 179 (402)
T PLN02894 102 KEDAPTLVMVHGYGASQGFFFRNFDALAS-RFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKAK-NLSNFI 179 (402)
T ss_pred CCCCCEEEEECCCCcchhHHHHHHHHHHh-CCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHc-CCCCeE
Confidence 35679999999999999999999999985 699999999999999865422112 224677888888888 888999
Q ss_pred EEEEehhHHHHHHHHHhCCCccceEEEEeccCCCCCCChH-HHHHH--------HHHhh-cCC---------CCcc----
Q 025845 82 LVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPS-FVLEQ--------YSEKM-GKE---------DDSW---- 138 (247)
Q Consensus 82 lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~-~~~~~--------~~~~~-~~~---------~~~~---- 138 (247)
|+||||||.+++.+|.++|++|+++|++++.......... ..... +...+ ... ...+
T Consensus 180 lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gp~~~~l 259 (402)
T PLN02894 180 LLGHSFGGYVAAKYALKHPEHVQHLILVGPAGFSSESDDKSEWLTKFRATWKGAVLNHLWESNFTPQKIIRGLGPWGPNL 259 (402)
T ss_pred EEEECHHHHHHHHHHHhCchhhcEEEEECCccccCCcchhHHHHhhcchhHHHHHHHHHhhcCCCHHHHHHhccchhHHH
Confidence 9999999999999999999999999999885332221110 00000 00000 000 0000
Q ss_pred ccccc-ccccCCCCcc-cceeechhhHHHHHhcCC--Ccchh---h---------hhhhhhcccchhHHhhhhhhccchh
Q 025845 139 LDTQF-SQCDASNPSH-ISMLFGREFLTIKIYQLC--PPEVI---N---------LLRITFIGRAIVLRQIVSYLYLDSD 202 (247)
Q Consensus 139 ~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~---~---------~~~~~~~~~~~~~~~~l~~g~~D~~ 202 (247)
..... ........ . .........+.++++... ..... . ..........++++..+..|++|.+
T Consensus 260 ~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vP~liI~G~~D~i 338 (402)
T PLN02894 260 VRRYTTARFGAHST-GDILSEEESKLLTDYVYHTLAAKASGELCLKYIFSFGAFARKPLLESASEWKVPTTFIYGRHDWM 338 (402)
T ss_pred HHHHHHHHhhhccc-ccccCcchhhHHHHHHHHhhcCCCchHHHHHHhccCchhhcchHhhhcccCCCCEEEEEeCCCCC
Confidence 00000 00000000 0 000001111212221110 00000 0 0000112334456666667999987
Q ss_pred HHHHHHHHHHHhhcCCcceeeecCCCccccccChhhHHHHHHhhC
Q 025845 203 TMQIMLNFIIIIIITTHMSELINCSRRAFFLYHNTLFIQFVYVLC 247 (247)
Q Consensus 203 ~p~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~v~~~~ 247 (247)
.+.... .+.....+.+++++++++||++++|+|++|++.|.+.|
T Consensus 339 ~~~~~~-~~~~~~~~~~~~~~i~~aGH~~~~E~P~~f~~~l~~~~ 382 (402)
T PLN02894 339 NYEGAV-EARKRMKVPCEIIRVPQGGHFVFLDNPSGFHSAVLYAC 382 (402)
T ss_pred CcHHHH-HHHHHcCCCCcEEEeCCCCCeeeccCHHHHHHHHHHHH
Confidence 764444 44413335689999999999999999999999999876
No 28
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.97 E-value=2.6e-29 Score=191.46 Aligned_cols=230 Identities=17% Similarity=0.152 Sum_probs=148.6
Q ss_pred CcEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEecCCCCCCCCCccc-CccCHHHhHHH-HHHHHHhCCCCCcEEEEEEe
Q 025845 9 EKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIE-DVHTFHAYSEP-LMEVLASLPAEEKVILVGHS 86 (247)
Q Consensus 9 ~~~iv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~~-l~~~i~~l~~~~~~~lvGhS 86 (247)
+|+|||+||++++...|.++++.|+ +||+|+++|+||+|.|+.+.. ..+++++.+++ +.++++.+ +.++++++|||
T Consensus 1 ~~~vv~~hG~~~~~~~~~~~~~~L~-~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~G~S 78 (251)
T TIGR03695 1 KPVLVFLHGFLGSGADWQALIELLG-PHFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQL-GIEPFFLVGYS 78 (251)
T ss_pred CCEEEEEcCCCCchhhHHHHHHHhc-ccCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHHc-CCCeEEEEEec
Confidence 4899999999999999999999998 689999999999999987553 35789999999 77888888 78899999999
Q ss_pred hhHHHHHHHHHhCCCccceEEEEeccCCCCCCChHH-HH---HHHHHhh-cCCCCcccccccccccCCCCcccceeechh
Q 025845 87 LGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSF-VL---EQYSEKM-GKEDDSWLDTQFSQCDASNPSHISMLFGRE 161 (247)
Q Consensus 87 ~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~-~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (247)
+||.+++.+|.++|++|+++|++++........... .. ..+...+ ......+............ .......
T Consensus 79 ~Gg~ia~~~a~~~~~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 154 (251)
T TIGR03695 79 MGGRIALYYALQYPERVQGLILESGSPGLATEEERAARRQNDEQLAQRFEQEGLEAFLDDWYQQPLFAS----QKNLPPE 154 (251)
T ss_pred cHHHHHHHHHHhCchheeeeEEecCCCCcCchHhhhhhhhcchhhhhHHHhcCccHHHHHHhcCceeee----cccCChH
Confidence 999999999999999999999998853222111000 00 0000000 0011111111100000000 0000111
Q ss_pred hHHHHHhcCCCcchhhhhhh------------hhcccchhHHhhhhhhccchhHHHHHHHHHHHhhcCCcceeeecCCCc
Q 025845 162 FLTIKIYQLCPPEVINLLRI------------TFIGRAIVLRQIVSYLYLDSDTMQIMLNFIIIIIITTHMSELINCSRR 229 (247)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~l~~g~~D~~~p~~~~~~~~~~~~~~~~~~~i~~~gH 229 (247)
.................... ......+..+..+..|+.|..++ ...+.+. ...++.+++++|++||
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~-~~~~~~~-~~~~~~~~~~~~~~gH 232 (251)
T TIGR03695 155 QRQALRAKRLANNPEGLAKMLRATGLGKQPSLWPKLQALTIPVLYLCGEKDEKFV-QIAKEMQ-KLLPNLTLVIIANAGH 232 (251)
T ss_pred HhHHHHHhcccccchHHHHHHHHhhhhcccchHHHhhCCCCceEEEeeCcchHHH-HHHHHHH-hcCCCCcEEEEcCCCC
Confidence 11111110000000000000 01122344556666699998775 4566677 7889999999999999
Q ss_pred cccccChhhHHHHHHhh
Q 025845 230 AFFLYHNTLFIQFVYVL 246 (247)
Q Consensus 230 ~~~~e~p~~~~~~v~~~ 246 (247)
++++|+|++|++.|.++
T Consensus 233 ~~~~e~~~~~~~~i~~~ 249 (251)
T TIGR03695 233 NIHLENPEAFAKILLAF 249 (251)
T ss_pred CcCccChHHHHHHHHHH
Confidence 99999999999998876
No 29
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.97 E-value=2.7e-30 Score=206.11 Aligned_cols=232 Identities=13% Similarity=0.074 Sum_probs=144.2
Q ss_pred CcEEEEEcCCCCChh------------hHHHHHH---HHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHh
Q 025845 9 EKHFVLVHGVNHGAW------------CWYKLKA---RLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLAS 73 (247)
Q Consensus 9 ~~~iv~lhG~~~~~~------------~~~~~~~---~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~ 73 (247)
++|+||+||++++.. .|.++++ .|..++|+||++|+||||.|... .++++++++|+.+++++
T Consensus 57 ~~p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~~~---~~~~~~~a~dl~~ll~~ 133 (343)
T PRK08775 57 GAPVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGADGSLDV---PIDTADQADAIALLLDA 133 (343)
T ss_pred CCCEEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCCCCCCCC---CCCHHHHHHHHHHHHHH
Confidence 557888877777655 6888886 57434699999999999988532 36889999999999999
Q ss_pred CCCCCcE-EEEEEehhHHHHHHHHHhCCCccceEEEEeccCCCCCCChHHHHH--HHHHhhcCCC---Cc---cccc---
Q 025845 74 LPAEEKV-ILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLE--QYSEKMGKED---DS---WLDT--- 141 (247)
Q Consensus 74 l~~~~~~-~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~--~~~~~~~~~~---~~---~~~~--- 141 (247)
+ +.+++ +||||||||++|+.+|.++|++|+++|++++.... ......... .......... .. ....
T Consensus 134 l-~l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (343)
T PRK08775 134 L-GIARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAHRA-HPYAAAWRALQRRAVALGQLQCAEKHGLALARQLAM 211 (343)
T ss_pred c-CCCcceEEEEECHHHHHHHHHHHHChHhhheEEEECccccC-CHHHHHHHHHHHHHHHcCCCCCCchhHHHHHHHHHH
Confidence 9 78664 79999999999999999999999999999986332 111111111 0000000000 00 0000
Q ss_pred --------ccccccCCCCc--ccceeechhhHH----HHHhcCCCcchhhhhhhh----hcccchhHHhhhhhhccchhH
Q 025845 142 --------QFSQCDASNPS--HISMLFGREFLT----IKIYQLCPPEVINLLRIT----FIGRAIVLRQIVSYLYLDSDT 203 (247)
Q Consensus 142 --------~~~~~~~~~~~--~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~g~~D~~~ 203 (247)
....+...... ............ .................. .....+.++.++..|++|.++
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~~PtLvi~G~~D~~~ 291 (343)
T PRK08775 212 LSYRTPEEFEERFDAPPEVINGRVRVAAEDYLDAAGAQYVARTPVNAYLRLSESIDLHRVDPEAIRVPTVVVAVEGDRLV 291 (343)
T ss_pred HHcCCHHHHHHHhCCCccccCCCccchHHHHHHHHHHHHHHhcChhHHHHHHHHHhhcCCChhcCCCCeEEEEeCCCEee
Confidence 00000000000 000000011111 011111110011111111 113455667777779999999
Q ss_pred HHHHHHHHHHhhc-CCcceeeecC-CCccccccChhhHHHHHHhh
Q 025845 204 MQIMLNFIIIIII-TTHMSELINC-SRRAFFLYHNTLFIQFVYVL 246 (247)
Q Consensus 204 p~~~~~~~~~~~~-~~~~~~~i~~-~gH~~~~e~p~~~~~~v~~~ 246 (247)
|....+.+. +.+ |+++++++++ +||.+++|+|++|++.|..+
T Consensus 292 p~~~~~~~~-~~i~p~a~l~~i~~~aGH~~~lE~Pe~~~~~l~~F 335 (343)
T PRK08775 292 PLADLVELA-EGLGPRGSLRVLRSPYGHDAFLKETDRIDAILTTA 335 (343)
T ss_pred CHHHHHHHH-HHcCCCCeEEEEeCCccHHHHhcCHHHHHHHHHHH
Confidence 998888887 666 7999999985 99999999999999999765
No 30
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.97 E-value=3.3e-29 Score=195.03 Aligned_cols=234 Identities=16% Similarity=0.133 Sum_probs=144.0
Q ss_pred CCcEEEEEcCCCCChh-hHHHHHHHHHhCCcEEEEecCCCCCCCCCcccC--ccCHHHhHHHHHHHHHhCCCCCcEEEEE
Q 025845 8 EEKHFVLVHGVNHGAW-CWYKLKARLVAGGHRVTAVDLAASGINMKRIED--VHTFHAYSEPLMEVLASLPAEEKVILVG 84 (247)
Q Consensus 8 ~~~~iv~lhG~~~~~~-~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~--~~~~~~~~~~l~~~i~~l~~~~~~~lvG 84 (247)
.+++|||+||++++.. .|..+...+.+.||+|+++|+||||.|+.+... .++++++++++.++++++ +.++++++|
T Consensus 24 ~~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~liG 102 (288)
T TIGR01250 24 EKIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFVDELEEVREKL-GLDKFYLLG 102 (288)
T ss_pred CCCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHHHHHHHHHHHc-CCCcEEEEE
Confidence 4689999999866554 566776777655899999999999999876433 379999999999999999 788999999
Q ss_pred EehhHHHHHHHHHhCCCccceEEEEeccCCCCCCChHHHHHHHHHhhcCCCCcccccccccccCCCC-c-----------
Q 025845 85 HSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNP-S----------- 152 (247)
Q Consensus 85 hS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----------- 152 (247)
|||||.+++.+|.++|++|+++|++++........ . ....+...+.......+...........+ +
T Consensus 103 ~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (288)
T TIGR01250 103 HSWGGMLAQEYALKYGQHLKGLIISSMLDSAPEYV-K-ELNRLRKELPPEVRAAIKRCEASGDYDNPEYQEAVEVFYHHL 180 (288)
T ss_pred eehHHHHHHHHHHhCccccceeeEecccccchHHH-H-HHHHHHhhcChhHHHHHHHHHhccCcchHHHHHHHHHHHHHh
Confidence 99999999999999999999999998753221110 0 00111111000000000000000000000 0
Q ss_pred ccceeechhhHHHHHhcCC--------Ccchhhhh------hhhhcccchhHHhhhhhhccchhHHHHHHHHHHHhhcCC
Q 025845 153 HISMLFGREFLTIKIYQLC--------PPEVINLL------RITFIGRAIVLRQIVSYLYLDSDTMQIMLNFIIIIIITT 218 (247)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~--------~~~~~~~~------~~~~~~~~~~~~~~l~~g~~D~~~p~~~~~~~~~~~~~~ 218 (247)
.......+........... ........ ........+.++..+..|+.|.+ +++..+.+. +.+++
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~-~~~~~~~~~-~~~~~ 258 (288)
T TIGR01250 181 LCRTRKWPEALKHLKSGMNTNVYNIMQGPNEFTITGNLKDWDITDKLSEIKVPTLLTVGEFDTM-TPEAAREMQ-ELIAG 258 (288)
T ss_pred hcccccchHHHHHHhhccCHHHHhcccCCccccccccccccCHHHHhhccCCCEEEEecCCCcc-CHHHHHHHH-HhccC
Confidence 0000000000110000000 00000000 00011223345555566999985 556777787 88899
Q ss_pred cceeeecCCCccccccChhhHHHHHHhh
Q 025845 219 HMSELINCSRRAFFLYHNTLFIQFVYVL 246 (247)
Q Consensus 219 ~~~~~i~~~gH~~~~e~p~~~~~~v~~~ 246 (247)
+++++++++||++++|+|++|++.|..+
T Consensus 259 ~~~~~~~~~gH~~~~e~p~~~~~~i~~f 286 (288)
T TIGR01250 259 SRLVVFPDGSHMTMIEDPEVYFKLLSDF 286 (288)
T ss_pred CeEEEeCCCCCCcccCCHHHHHHHHHHH
Confidence 9999999999999999999999999875
No 31
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.97 E-value=1.5e-29 Score=201.15 Aligned_cols=225 Identities=16% Similarity=0.097 Sum_probs=143.3
Q ss_pred CCcEEEEEcCCCCChh-hHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCC-----CCCcEE
Q 025845 8 EEKHFVLVHGVNHGAW-CWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLP-----AEEKVI 81 (247)
Q Consensus 8 ~~~~iv~lhG~~~~~~-~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~-----~~~~~~ 81 (247)
.+++|||+||++.+.. .|..++..|.++||+|+++|+||||.|+.......+++.+++|+.++++.+. ...+++
T Consensus 58 ~~~~VvllHG~~~~~~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~ 137 (330)
T PLN02298 58 PRALIFMVHGYGNDISWTFQSTAIFLAQMGFACFALDLEGHGRSEGLRAYVPNVDLVVEDCLSFFNSVKQREEFQGLPRF 137 (330)
T ss_pred CceEEEEEcCCCCCcceehhHHHHHHHhCCCEEEEecCCCCCCCCCccccCCCHHHHHHHHHHHHHHHHhcccCCCCCEE
Confidence 4567999999986643 5677888898889999999999999997654434689999999999999872 124799
Q ss_pred EEEEehhHHHHHHHHHhCCCccceEEEEeccCCCCCCC-hHHHHH---HHHHhhcCCCCcccccccccccCCCCccccee
Q 025845 82 LVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHR-PSFVLE---QYSEKMGKEDDSWLDTQFSQCDASNPSHISML 157 (247)
Q Consensus 82 lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (247)
|+||||||.+++.++.++|++|+++|++++........ ...... .+...+ ............. ...
T Consensus 138 l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~--------~~~ 207 (330)
T PLN02298 138 LYGESMGGAICLLIHLANPEGFDGAVLVAPMCKISDKIRPPWPIPQILTFVARF--LPTLAIVPTADLL--------EKS 207 (330)
T ss_pred EEEecchhHHHHHHHhcCcccceeEEEecccccCCcccCCchHHHHHHHHHHHH--CCCCccccCCCcc--------ccc
Confidence 99999999999999999999999999999863321110 011111 111111 0000000000000 000
Q ss_pred echhhHHHHHhcC----C-Ccc---hhhhhh----hhhcccchhHHhhhhhhccchhHHHHHHHHHHHhhc--CCcceee
Q 025845 158 FGREFLTIKIYQL----C-PPE---VINLLR----ITFIGRAIVLRQIVSYLYLDSDTMQIMLNFIIIIII--TTHMSEL 223 (247)
Q Consensus 158 ~~~~~~~~~~~~~----~-~~~---~~~~~~----~~~~~~~~~~~~~l~~g~~D~~~p~~~~~~~~~~~~--~~~~~~~ 223 (247)
............. . ... ...... .......++++.++.+|++|.++|.+..+.+. +.+ ++.++++
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~ivp~~~~~~l~-~~i~~~~~~l~~ 286 (330)
T PLN02298 208 VKVPAKKIIAKRNPMRYNGKPRLGTVVELLRVTDYLGKKLKDVSIPFIVLHGSADVVTDPDVSRALY-EEAKSEDKTIKI 286 (330)
T ss_pred ccCHHHHHHHHhCccccCCCccHHHHHHHHHHHHHHHHhhhhcCCCEEEEecCCCCCCCHHHHHHHH-HHhccCCceEEE
Confidence 0000000000000 0 000 000000 11223455677778889999999999999887 655 5789999
Q ss_pred ecCCCccccccChhhHHHHH
Q 025845 224 INCSRRAFFLYHNTLFIQFV 243 (247)
Q Consensus 224 i~~~gH~~~~e~p~~~~~~v 243 (247)
++++||.+++++|+.+.+.+
T Consensus 287 ~~~a~H~~~~e~pd~~~~~~ 306 (330)
T PLN02298 287 YDGMMHSLLFGEPDENIEIV 306 (330)
T ss_pred cCCcEeeeecCCCHHHHHHH
Confidence 99999999999998755544
No 32
>PRK10749 lysophospholipase L2; Provisional
Probab=99.97 E-value=9e-29 Score=196.28 Aligned_cols=238 Identities=12% Similarity=0.055 Sum_probs=149.2
Q ss_pred CCCcEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEecCCCCCCCCCccc-----CccCHHHhHHHHHHHHHhC---CCCC
Q 025845 7 MEEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIE-----DVHTFHAYSEPLMEVLASL---PAEE 78 (247)
Q Consensus 7 ~~~~~iv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~-----~~~~~~~~~~~l~~~i~~l---~~~~ 78 (247)
..+++||++||++++...|..++..|.++||+|+++|+||||.|+.+.. ..++++++++|+.++++.+ .+..
T Consensus 52 ~~~~~vll~HG~~~~~~~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 131 (330)
T PRK10749 52 HHDRVVVICPGRIESYVKYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPHRGHVERFNDYVDDLAAFWQQEIQPGPYR 131 (330)
T ss_pred CCCcEEEEECCccchHHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCCcCccccHHHHHHHHHHHHHHHHhcCCCC
Confidence 3457999999999999999999988888899999999999999975432 1258999999999999875 1357
Q ss_pred cEEEEEEehhHHHHHHHHHhCCCccceEEEEeccCCCCCCChHHHHHHHHHhhcCC--CCcccccccccccCCCCc-ccc
Q 025845 79 KVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKE--DDSWLDTQFSQCDASNPS-HIS 155 (247)
Q Consensus 79 ~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~ 155 (247)
+++++||||||.+++.+|.++|++|+++|++++...............+....... ............. ..++ ...
T Consensus 132 ~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 210 (330)
T PRK10749 132 KRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIVLPLPSWMARRILNWAEGHPRIRDGYAIGTGRWR-PLPFAINV 210 (330)
T ss_pred CeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhccCCCCCcHHHHHHHHHHHHhcCCCCcCCCCCCCCC-CCCcCCCC
Confidence 99999999999999999999999999999998853221111111111111111000 0000000000000 0000 000
Q ss_pred eeechhhH---HHHHhcCCCc-----chhhhh-------hhhhcccchhHHhhhhhhccchhHHHHHHHHHHHhhc----
Q 025845 156 MLFGREFL---TIKIYQLCPP-----EVINLL-------RITFIGRAIVLRQIVSYLYLDSDTMQIMLNFIIIIII---- 216 (247)
Q Consensus 156 ~~~~~~~~---~~~~~~~~~~-----~~~~~~-------~~~~~~~~~~~~~~l~~g~~D~~~p~~~~~~~~~~~~---- 216 (247)
....++.. .+.+...... ...... ........++++.++..|++|.++|....+.++ +.+
T Consensus 211 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~vv~~~~~~~~~-~~l~~~~ 289 (330)
T PRK10749 211 LTHSRERYRRNLRFYADDPELRVGGPTYHWVRESILAGEQVLAGAGDITTPLLLLQAEEERVVDNRMHDRFC-EARTAAG 289 (330)
T ss_pred CCCCHHHHHHHHHHHHhCCCcccCCCcHHHHHHHHHHHHHHHhhccCCCCCEEEEEeCCCeeeCHHHHHHHH-HHHhhcC
Confidence 00011111 1122111110 000000 111234556677788889999999999888886 654
Q ss_pred ---CCcceeeecCCCccccccCh---hhHHHHHHhh
Q 025845 217 ---TTHMSELINCSRRAFFLYHN---TLFIQFVYVL 246 (247)
Q Consensus 217 ---~~~~~~~i~~~gH~~~~e~p---~~~~~~v~~~ 246 (247)
++++++++|++||.++.|.+ +++.+.|..+
T Consensus 290 ~~~~~~~l~~~~gagH~~~~E~~~~r~~v~~~i~~f 325 (330)
T PRK10749 290 HPCEGGKPLVIKGAYHEILFEKDAMRSVALNAIVDF 325 (330)
T ss_pred CCCCCceEEEeCCCcchhhhCCcHHHHHHHHHHHHH
Confidence 45689999999999999987 4555666554
No 33
>PRK07581 hypothetical protein; Validated
Probab=99.96 E-value=8.9e-30 Score=203.10 Aligned_cols=234 Identities=11% Similarity=0.002 Sum_probs=139.6
Q ss_pred CcEEEEEcCCCCChhhHHHHH---HHHHhCCcEEEEecCCCCCCCCCccc--CccCHHH-----hHHHHHH----HHHhC
Q 025845 9 EKHFVLVHGVNHGAWCWYKLK---ARLVAGGHRVTAVDLAASGINMKRIE--DVHTFHA-----YSEPLME----VLASL 74 (247)
Q Consensus 9 ~~~iv~lhG~~~~~~~~~~~~---~~l~~~g~~vi~~D~~G~G~S~~~~~--~~~~~~~-----~~~~l~~----~i~~l 74 (247)
.|+||++||++++...|..++ +.|...+|+||++|+||||.|+.+.. ..+++++ +++++.+ ++++|
T Consensus 41 ~~~vll~~~~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 120 (339)
T PRK07581 41 DNAILYPTWYSGTHQDNEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARFPHVTIYDNVRAQHRLLTEKF 120 (339)
T ss_pred CCEEEEeCCCCCCcccchhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCCCceeHHHHHHHHHHHHHHHh
Confidence 356777777777777776554 36654579999999999999986542 1244443 4666665 77889
Q ss_pred CCCCc-EEEEEEehhHHHHHHHHHhCCCccceEEEEeccCCCCCCChHHHHHHHHHhhcCCCCcccc-------------
Q 025845 75 PAEEK-VILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLD------------- 140 (247)
Q Consensus 75 ~~~~~-~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 140 (247)
++++ ++||||||||++|+.+|.++|++|+++|++++...... ............+... ..|..
T Consensus 121 -gi~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~~~~~-~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~ 197 (339)
T PRK07581 121 -GIERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTAKTTP-HNFVFLEGLKAALTAD-PAFNGGWYAEPPERGLRA 197 (339)
T ss_pred -CCCceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCCCCCH-HHHHHHHHHHHHHHhC-CCCCCCCCCCcHHHHHHH
Confidence 8899 58999999999999999999999999999987643211 1111111111111000 00000
Q ss_pred ---ccccc-cc----CCCCcccce-eechhhHHHHHh----cCCCcchhhhhh----------------hhhcccchhHH
Q 025845 141 ---TQFSQ-CD----ASNPSHISM-LFGREFLTIKIY----QLCPPEVINLLR----------------ITFIGRAIVLR 191 (247)
Q Consensus 141 ---~~~~~-~~----~~~~~~~~~-~~~~~~~~~~~~----~~~~~~~~~~~~----------------~~~~~~~~~~~ 191 (247)
..... .. ....+.... ....+....... ............ .......+.++
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~L~~I~~P 277 (339)
T PRK07581 198 HARVYAGWGFSQAFYRQELWRAMGYASLEDFLVGFWEGNFLPRDPNNLLAMLWTWQRGDISRNPAYGGDLAAALGSITAK 277 (339)
T ss_pred HHHHHHHHHhHHHHHHhhhccccChhhHHHHHHHHHHHhhcccCcccHHHHHHHhhhcccccCcccCCCHHHHHhcCCCC
Confidence 00000 00 000000000 000111111111 111111111000 00112234455
Q ss_pred hhhhhhccchhHHHHHHHHHHHhhcCCcceeeecC-CCccccccChhhHHHHHHhh
Q 025845 192 QIVSYLYLDSDTMQIMLNFIIIIIITTHMSELINC-SRRAFFLYHNTLFIQFVYVL 246 (247)
Q Consensus 192 ~~l~~g~~D~~~p~~~~~~~~~~~~~~~~~~~i~~-~gH~~~~e~p~~~~~~v~~~ 246 (247)
.++..|++|.++|....+.++ +.+|+++++++++ +||++++|+|+.|+..|.++
T Consensus 278 tLvI~G~~D~~~p~~~~~~l~-~~ip~a~l~~i~~~~GH~~~~~~~~~~~~~~~~~ 332 (339)
T PRK07581 278 TFVMPISTDLYFPPEDCEAEA-ALIPNAELRPIESIWGHLAGFGQNPADIAFIDAA 332 (339)
T ss_pred EEEEEeCCCCCCCHHHHHHHH-HhCCCCeEEEeCCCCCccccccCcHHHHHHHHHH
Confidence 566669999999999999998 8899999999999 99999999999999988764
No 34
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.96 E-value=4.4e-29 Score=199.77 Aligned_cols=235 Identities=14% Similarity=0.073 Sum_probs=145.7
Q ss_pred CCcEEEEEcCCCCChh-----------hHHHHHH---HHHhCCcEEEEecCCC--CCCCCCc----c-------cCccCH
Q 025845 8 EEKHFVLVHGVNHGAW-----------CWYKLKA---RLVAGGHRVTAVDLAA--SGINMKR----I-------EDVHTF 60 (247)
Q Consensus 8 ~~~~iv~lhG~~~~~~-----------~~~~~~~---~l~~~g~~vi~~D~~G--~G~S~~~----~-------~~~~~~ 60 (247)
.+++|||+||++++.. .|..++. .|..++|+||++|+|| ||.|... . ...+++
T Consensus 30 ~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~~~~~~~~~~~~~~~~~~~ 109 (351)
T TIGR01392 30 RSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPSSINPGGRPYGSDFPLITI 109 (351)
T ss_pred CCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCCCCCCCCCcCCCCCCCCcH
Confidence 4589999999999763 4887762 5544689999999999 5555321 1 114789
Q ss_pred HHhHHHHHHHHHhCCCCCc-EEEEEEehhHHHHHHHHHhCCCccceEEEEeccCCCCCCChHHHHHHHHHhhcCCCCcc-
Q 025845 61 HAYSEPLMEVLASLPAEEK-VILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSW- 138 (247)
Q Consensus 61 ~~~~~~l~~~i~~l~~~~~-~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 138 (247)
+++++++.++++++ +.++ ++|+||||||++++.+|.++|++|+++|++++.......... ........+. ....+
T Consensus 110 ~~~~~~~~~~~~~l-~~~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~ 186 (351)
T TIGR01392 110 RDDVKAQKLLLDHL-GIEQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSARHSAWCIA-FNEVQRQAIL-ADPNWN 186 (351)
T ss_pred HHHHHHHHHHHHHc-CCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEccCCcCCHHHHH-HHHHHHHHHH-hCCCCC
Confidence 99999999999999 8888 999999999999999999999999999999986432221111 1111111100 00000
Q ss_pred -------------cccc--------------cccccCCCCccccee-------echhhHH-----HHHhcCCCcchhhhh
Q 025845 139 -------------LDTQ--------------FSQCDASNPSHISML-------FGREFLT-----IKIYQLCPPEVINLL 179 (247)
Q Consensus 139 -------------~~~~--------------~~~~~~~~~~~~~~~-------~~~~~~~-----~~~~~~~~~~~~~~~ 179 (247)
+... ...+..... ..... ...+... ...............
T Consensus 187 ~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 265 (351)
T TIGR01392 187 DGDYYEDGQPDRGLALARMLAHLTYRSEESMAERFGRAPQ-SGESPASGFDTRFQVESYLRYQGDKFVDRFDANSYLYLT 265 (351)
T ss_pred CCCCCCCCChhhHHHHHHHHHHHhcCCHHHHHHHhCcCcc-cccccccccCccchHHHHHHHHHHHHHhhcCcchHHHHH
Confidence 0000 000000000 00000 0000000 011111110000000
Q ss_pred hh-------------hhcccchhHHhhhhhhccchhHHHHHHHHHHHhhcCCccee-----eecCCCccccccChhhHHH
Q 025845 180 RI-------------TFIGRAIVLRQIVSYLYLDSDTMQIMLNFIIIIIITTHMSE-----LINCSRRAFFLYHNTLFIQ 241 (247)
Q Consensus 180 ~~-------------~~~~~~~~~~~~l~~g~~D~~~p~~~~~~~~~~~~~~~~~~-----~i~~~gH~~~~e~p~~~~~ 241 (247)
.. ......+.++.++..|++|.++|+...+.++ +.+|++++. +++++||.+++|+|++|++
T Consensus 266 ~~l~~~d~~~~~~~~~~~l~~I~~P~Lvi~G~~D~~~p~~~~~~~a-~~i~~~~~~v~~~~i~~~~GH~~~le~p~~~~~ 344 (351)
T TIGR01392 266 RALDTHDLGRGRGSLTEALSRIKAPFLVVSITSDWLFPPAESRELA-KALPAAGLRVTYVEIESPYGHDAFLVETDQVEE 344 (351)
T ss_pred HHHHhcCCcCCCCCHHHHHhhCCCCEEEEEeCCccccCHHHHHHHH-HHHhhcCCceEEEEeCCCCCcchhhcCHHHHHH
Confidence 00 1122234455556669999999999999998 999999876 6689999999999999999
Q ss_pred HHHhhC
Q 025845 242 FVYVLC 247 (247)
Q Consensus 242 ~v~~~~ 247 (247)
.|..++
T Consensus 345 ~l~~FL 350 (351)
T TIGR01392 345 LIRGFL 350 (351)
T ss_pred HHHHHh
Confidence 998763
No 35
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.96 E-value=1.5e-28 Score=198.50 Aligned_cols=225 Identities=15% Similarity=0.147 Sum_probs=148.9
Q ss_pred CCCCCcEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCCcEEEEE
Q 025845 5 VGMEEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVG 84 (247)
Q Consensus 5 ~~~~~~~iv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~lvG 84 (247)
+.+++++|||+||++++...|..+...|.+ +|+|+++|+||||.|..... ..+++++++++.++++.+ +.++++|+|
T Consensus 127 g~~~~~~vl~~HG~~~~~~~~~~~~~~l~~-~~~v~~~d~~g~G~s~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~lvG 203 (371)
T PRK14875 127 GEGDGTPVVLIHGFGGDLNNWLFNHAALAA-GRPVIALDLPGHGASSKAVG-AGSLDELAAAVLAFLDAL-GIERAHLVG 203 (371)
T ss_pred cCCCCCeEEEECCCCCccchHHHHHHHHhc-CCEEEEEcCCCCCCCCCCCC-CCCHHHHHHHHHHHHHhc-CCccEEEEe
Confidence 345678999999999999999999999984 69999999999999965543 479999999999999999 888999999
Q ss_pred EehhHHHHHHHHHhCCCccceEEEEeccCCCCCCChHHHHHHHHHhh-cCCCCcccccccccccCCCCcccceeechhhH
Q 025845 85 HSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKM-GKEDDSWLDTQFSQCDASNPSHISMLFGREFL 163 (247)
Q Consensus 85 hS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (247)
|||||.+++.+|.++|+++.++|++++........ ..+...+.... ......++..... . .......+.
T Consensus 204 ~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---~------~~~~~~~~~ 273 (371)
T PRK14875 204 HSMGGAVALRLAARAPQRVASLTLIAPAGLGPEIN-GDYIDGFVAAESRRELKPVLELLFA---D------PALVTRQMV 273 (371)
T ss_pred echHHHHHHHHHHhCchheeEEEEECcCCcCcccc-hhHHHHhhcccchhHHHHHHHHHhc---C------hhhCCHHHH
Confidence 99999999999999999999999998753222111 11111111100 0000001100000 0 000011111
Q ss_pred HHHHhcCC---------------CcchhhhhhhhhcccchhHHhhhhhhccchhHHHHHHHHHHHhhcCCcceeeecCCC
Q 025845 164 TIKIYQLC---------------PPEVINLLRITFIGRAIVLRQIVSYLYLDSDTMQIMLNFIIIIIITTHMSELINCSR 228 (247)
Q Consensus 164 ~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~l~~g~~D~~~p~~~~~~~~~~~~~~~~~~~i~~~g 228 (247)
...+.... ..................++.++..|++|.++|....+.+. ++.++.+++++|
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~vp~~~~~~l~----~~~~~~~~~~~g 349 (371)
T PRK14875 274 EDLLKYKRLDGVDDALRALADALFAGGRQRVDLRDRLASLAIPVLVIWGEQDRIIPAAHAQGLP----DGVAVHVLPGAG 349 (371)
T ss_pred HHHHHHhccccHHHHHHHHHHHhccCcccchhHHHHHhcCCCCEEEEEECCCCccCHHHHhhcc----CCCeEEEeCCCC
Confidence 11110000 00000000011122334566667779999999987665543 578999999999
Q ss_pred ccccccChhhHHHHHHhh
Q 025845 229 RAFFLYHNTLFIQFVYVL 246 (247)
Q Consensus 229 H~~~~e~p~~~~~~v~~~ 246 (247)
|++++|+|++|++.|..+
T Consensus 350 H~~~~e~p~~~~~~i~~f 367 (371)
T PRK14875 350 HMPQMEAAADVNRLLAEF 367 (371)
T ss_pred CChhhhCHHHHHHHHHHH
Confidence 999999999999998764
No 36
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.96 E-value=2.9e-28 Score=196.50 Aligned_cols=233 Identities=15% Similarity=0.159 Sum_probs=144.0
Q ss_pred CcEEEEEcCCCCChhh-------------HHHHHH---HHHhCCcEEEEecCCCC-CCCCCccc-------------Ccc
Q 025845 9 EKHFVLVHGVNHGAWC-------------WYKLKA---RLVAGGHRVTAVDLAAS-GINMKRIE-------------DVH 58 (247)
Q Consensus 9 ~~~iv~lhG~~~~~~~-------------~~~~~~---~l~~~g~~vi~~D~~G~-G~S~~~~~-------------~~~ 58 (247)
+|+|||+||++++... |..++. .|...+|+||++|++|+ |.|+.+.. ..+
T Consensus 48 ~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~~~~~~~~~~~~~~~~~~~~ 127 (379)
T PRK00175 48 SNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTGPSSINPDTGKPYGSDFPVI 127 (379)
T ss_pred CCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCCCCCCCCCCCCcccCCCCcC
Confidence 6899999999999874 677662 44235799999999993 55543210 147
Q ss_pred CHHHhHHHHHHHHHhCCCCCc-EEEEEEehhHHHHHHHHHhCCCccceEEEEeccCCCCCCChHHHHHHHHHhhcCCCCc
Q 025845 59 TFHAYSEPLMEVLASLPAEEK-VILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDS 137 (247)
Q Consensus 59 ~~~~~~~~l~~~i~~l~~~~~-~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (247)
+++++++++.++++++ +.++ ++++||||||++++.+|.++|++|+++|++++.......... ........+. ....
T Consensus 128 ~~~~~~~~~~~~l~~l-~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~-~~~~~~~~i~-~~~~ 204 (379)
T PRK00175 128 TIRDWVRAQARLLDAL-GITRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSARLSAQNIA-FNEVARQAIL-ADPD 204 (379)
T ss_pred CHHHHHHHHHHHHHHh-CCCCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCcccCHHHHH-HHHHHHHHHH-hCCC
Confidence 9999999999999999 8888 599999999999999999999999999999986432211110 1110000000 0000
Q ss_pred cc--------------------------------ccccccccCCCCcc-ccee--ec-hhhHH---HHHhcCCCcch-hh
Q 025845 138 WL--------------------------------DTQFSQCDASNPSH-ISML--FG-REFLT---IKIYQLCPPEV-IN 177 (247)
Q Consensus 138 ~~--------------------------------~~~~~~~~~~~~~~-~~~~--~~-~~~~~---~~~~~~~~~~~-~~ 177 (247)
|- ...+........ + .... .. ..... ..+........ ..
T Consensus 205 ~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~d~~~~~~ 283 (379)
T PRK00175 205 WHGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGRELQSGE-LPFGFDVEFQVESYLRYQGDKFVERFDANSYLY 283 (379)
T ss_pred CCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCccccccc-cccCCCccchHHHHHHHHHHHHhhccCchHHHH
Confidence 00 000000000000 0 0000 00 00000 00011111110 00
Q ss_pred hhhh--------------hhcccchhHHhhhhhhccchhHHHHHHHHHHHhhcCCc----ceeeec-CCCccccccChhh
Q 025845 178 LLRI--------------TFIGRAIVLRQIVSYLYLDSDTMQIMLNFIIIIIITTH----MSELIN-CSRRAFFLYHNTL 238 (247)
Q Consensus 178 ~~~~--------------~~~~~~~~~~~~l~~g~~D~~~p~~~~~~~~~~~~~~~----~~~~i~-~~gH~~~~e~p~~ 238 (247)
.... ......+.++.++..|++|.++|+...++++ +.++++ ++++++ ++||.+++|+|++
T Consensus 284 ~~~~~~~~d~~~~~~~d~~~~l~~I~~PtLvI~G~~D~~~p~~~~~~la-~~i~~a~~~~~l~~i~~~~GH~~~le~p~~ 362 (379)
T PRK00175 284 LTRALDYFDPARGRGGDLAAALARIKARFLVVSFTSDWLFPPARSREIV-DALLAAGADVSYAEIDSPYGHDAFLLDDPR 362 (379)
T ss_pred HHHHHHhccccCCCCCCHHHHHhcCCCCEEEEEECCccccCHHHHHHHH-HHHHhcCCCeEEEEeCCCCCchhHhcCHHH
Confidence 0000 1122344556666669999999999999998 989887 677775 9999999999999
Q ss_pred HHHHHHhh
Q 025845 239 FIQFVYVL 246 (247)
Q Consensus 239 ~~~~v~~~ 246 (247)
|++.|..+
T Consensus 363 ~~~~L~~F 370 (379)
T PRK00175 363 YGRLVRAF 370 (379)
T ss_pred HHHHHHHH
Confidence 99999865
No 37
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.96 E-value=1.1e-27 Score=220.37 Aligned_cols=230 Identities=15% Similarity=0.104 Sum_probs=146.8
Q ss_pred CCcEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEecCCCCCCCCCcc-------cCccCHHHhHHHHHHHHHhCCCCCcE
Q 025845 8 EEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRI-------EDVHTFHAYSEPLMEVLASLPAEEKV 80 (247)
Q Consensus 8 ~~~~iv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~-------~~~~~~~~~~~~l~~~i~~l~~~~~~ 80 (247)
++++|||+||++++...|.+++..|.+ +|+|+++|+||||.|..+. ...++++++++++.++++++ +.+++
T Consensus 1370 ~~~~vVllHG~~~s~~~w~~~~~~L~~-~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~l-~~~~v 1447 (1655)
T PLN02980 1370 EGSVVLFLHGFLGTGEDWIPIMKAISG-SARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEHI-TPGKV 1447 (1655)
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHhC-CCEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHHh-CCCCE
Confidence 568999999999999999999999984 6999999999999997542 12468999999999999999 88999
Q ss_pred EEEEEehhHHHHHHHHHhCCCccceEEEEeccCCCCCCChHHHHHH----HHHhh-cCCCCcccccccccccCCCCcccc
Q 025845 81 ILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQ----YSEKM-GKEDDSWLDTQFSQCDASNPSHIS 155 (247)
Q Consensus 81 ~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 155 (247)
+|+||||||.+++.++.++|++|+++|++++............... ....+ ......+....+... ..+ .
T Consensus 1448 ~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~-~~~----~ 1522 (1655)
T PLN02980 1448 TLVGYSMGARIALYMALRFSDKIEGAVIISGSPGLKDEVARKIRSAKDDSRARMLIDHGLEIFLENWYSGE-LWK----S 1522 (1655)
T ss_pred EEEEECHHHHHHHHHHHhChHhhCEEEEECCCCccCchHHHHHHhhhhhHHHHHHHhhhHHHHHHHhccHH-Hhh----h
Confidence 9999999999999999999999999999987522211111000000 00000 000000100000000 000 0
Q ss_pred eeechh---hHHHHHhcCCCcchhhhhhhh---------hcccchhHHhhhhhhccchhHHHHHHHHHHHhhcCC-----
Q 025845 156 MLFGRE---FLTIKIYQLCPPEVINLLRIT---------FIGRAIVLRQIVSYLYLDSDTMQIMLNFIIIIIITT----- 218 (247)
Q Consensus 156 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~l~~g~~D~~~p~~~~~~~~~~~~~~----- 218 (247)
....+. .....+..............+ .....++.+.++..|++|..++ ...+++. +.+++
T Consensus 1523 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dl~~~L~~I~~PtLlI~Ge~D~~~~-~~a~~~~-~~i~~a~~~~ 1600 (1655)
T PLN02980 1523 LRNHPHFNKIVASRLLHKDVPSLAKLLSDLSIGRQPSLWEDLKQCDTPLLLVVGEKDVKFK-QIAQKMY-REIGKSKESG 1600 (1655)
T ss_pred hccCHHHHHHHHHHHhcCCHHHHHHHHHHhhhcccchHHHHHhhCCCCEEEEEECCCCccH-HHHHHHH-HHcccccccc
Confidence 000001 111111111100000011111 1133344556666699999876 5556666 66665
Q ss_pred -------cceeeecCCCccccccChhhHHHHHHhh
Q 025845 219 -------HMSELINCSRRAFFLYHNTLFIQFVYVL 246 (247)
Q Consensus 219 -------~~~~~i~~~gH~~~~e~p~~~~~~v~~~ 246 (247)
++++++|++||.+++|+|++|++.|..+
T Consensus 1601 ~~~~~~~a~lvvI~~aGH~~~lE~Pe~f~~~I~~F 1635 (1655)
T PLN02980 1601 NDKGKEIIEIVEIPNCGHAVHLENPLPVIRALRKF 1635 (1655)
T ss_pred ccccccceEEEEECCCCCchHHHCHHHHHHHHHHH
Confidence 4899999999999999999999999765
No 38
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.95 E-value=2.4e-26 Score=184.89 Aligned_cols=228 Identities=14% Similarity=0.093 Sum_probs=148.0
Q ss_pred CCcEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCC---CCCcEEEEE
Q 025845 8 EEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLP---AEEKVILVG 84 (247)
Q Consensus 8 ~~~~iv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~---~~~~~~lvG 84 (247)
.+++|||+||++++...|..+++.|.++||+|+++|+||||.|+.......+++.+++|+.++++.+. ...+++++|
T Consensus 135 ~~~~Vl~lHG~~~~~~~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvG 214 (395)
T PLN02652 135 MRGILIIIHGLNEHSGRYLHFAKQLTSCGFGVYAMDWIGHGGSDGLHGYVPSLDYVVEDTEAFLEKIRSENPGVPCFLFG 214 (395)
T ss_pred CceEEEEECCchHHHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCCCCCEEEEE
Confidence 34689999999999999999999998889999999999999998765444588899999999998872 234799999
Q ss_pred EehhHHHHHHHHHhCC---CccceEEEEeccCCCCCCChH-HHHHHHHHhhcCCCCcccccccccccCCCCcccceeech
Q 025845 85 HSLGGVTLALAADKFP---HKISVAVFVTAFMPDTTHRPS-FVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGR 160 (247)
Q Consensus 85 hS~Gg~ia~~~a~~~p---~~v~~lvl~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (247)
|||||.+++.++. +| ++++++|+.++.......... .....+.... ...+.-..... ...+ ....+
T Consensus 215 hSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~~~~~~~~~~~~l~~~~---~p~~~~~~~~~--~~~~----~s~~~ 284 (395)
T PLN02652 215 HSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVKPAHPIVGAVAPIFSLV---APRFQFKGANK--RGIP----VSRDP 284 (395)
T ss_pred ECHHHHHHHHHHh-ccCcccccceEEEECcccccccchHHHHHHHHHHHHh---CCCCcccCccc--ccCC----cCCCH
Confidence 9999999998775 55 489999999886432211110 0111111111 11110000000 0000 00011
Q ss_pred hhHHHHHhcCCC-c--c-h------hhhhh-hhhcccchhHHhhhhhhccchhHHHHHHHHHHHhhcC--CcceeeecCC
Q 025845 161 EFLTIKIYQLCP-P--E-V------INLLR-ITFIGRAIVLRQIVSYLYLDSDTMQIMLNFIIIIIIT--THMSELINCS 227 (247)
Q Consensus 161 ~~~~~~~~~~~~-~--~-~------~~~~~-~~~~~~~~~~~~~l~~g~~D~~~p~~~~~~~~~~~~~--~~~~~~i~~~ 227 (247)
......+.+... . . . ..... .......++++.++.+|++|.++|.+..+.+. +..+ +.++.++|++
T Consensus 285 ~~~~~~~~dp~~~~g~i~~~~~~~~~~~~~~l~~~L~~I~vPvLIi~G~~D~vvp~~~a~~l~-~~~~~~~k~l~~~~ga 363 (395)
T PLN02652 285 AALLAKYSDPLVYTGPIRVRTGHEILRISSYLTRNFKSVTVPFMVLHGTADRVTDPLASQDLY-NEAASRHKDIKLYDGF 363 (395)
T ss_pred HHHHHHhcCCCcccCCchHHHHHHHHHHHHHHHhhcccCCCCEEEEEeCCCCCCCHHHHHHHH-HhcCCCCceEEEECCC
Confidence 111111111000 0 0 0 00000 01223455677778889999999999999987 6543 4789999999
Q ss_pred Ccccccc-ChhhHHHHHHhh
Q 025845 228 RRAFFLY-HNTLFIQFVYVL 246 (247)
Q Consensus 228 gH~~~~e-~p~~~~~~v~~~ 246 (247)
+|.+++| +++++.+.+..|
T Consensus 364 ~H~l~~e~~~e~v~~~I~~F 383 (395)
T PLN02652 364 LHDLLFEPEREEVGRDIIDW 383 (395)
T ss_pred eEEeccCCCHHHHHHHHHHH
Confidence 9999888 789999998775
No 39
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.95 E-value=1.9e-26 Score=174.24 Aligned_cols=231 Identities=13% Similarity=0.079 Sum_probs=158.0
Q ss_pred CCCcEEEEEcCCCCChhhHHHHHHHHHh-CCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCC---CCCcEEE
Q 025845 7 MEEKHFVLVHGVNHGAWCWYKLKARLVA-GGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLP---AEEKVIL 82 (247)
Q Consensus 7 ~~~~~iv~lhG~~~~~~~~~~~~~~l~~-~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~---~~~~~~l 82 (247)
...||++++||+.|+...|..+...|+. -+..|+++|.|.||.|+.... .+.+.+++|+..+|+... ...++.+
T Consensus 50 ~~~Pp~i~lHGl~GS~~Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~~--h~~~~ma~dv~~Fi~~v~~~~~~~~~~l 127 (315)
T KOG2382|consen 50 ERAPPAIILHGLLGSKENWRSVAKNLSRKLGRDVYAVDVRNHGSSPKITV--HNYEAMAEDVKLFIDGVGGSTRLDPVVL 127 (315)
T ss_pred CCCCceEEecccccCCCCHHHHHHHhcccccCceEEEecccCCCCccccc--cCHHHHHHHHHHHHHHcccccccCCcee
Confidence 4679999999999999999999999976 467999999999999987763 689999999999999983 2679999
Q ss_pred EEEehhH-HHHHHHHHhCCCccceEEEEeccCCCCCCChHHHHHHHHHhhcCCCC------------------------c
Q 025845 83 VGHSLGG-VTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDD------------------------S 137 (247)
Q Consensus 83 vGhS~Gg-~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~ 137 (247)
+|||||| .+++..+.++|+.+.++|+++..+...+.+.....+.+......+.. .
T Consensus 128 ~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~~~~e~~e~i~~m~~~d~~~~~~~~rke~~~~l~~~~~d~~~~~ 207 (315)
T KOG2382|consen 128 LGHSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGRSYGEYRELIKAMIQLDLSIGVSRGRKEALKSLIEVGFDNLVRQ 207 (315)
T ss_pred cccCcchHHHHHHHHHhcCcccceeEEEecCCccCCcccchHHHHHHHHHhccccccccccHHHHHHHHHHHhcchHHHH
Confidence 9999999 78888888999999999999987433333333233322222100111 0
Q ss_pred ccccccccccCCCCcccceeechhhHHHHHhcCCCcchhhhhhhhhcccchhHHhhhhhhccchhHHHHHHHHHHHhhcC
Q 025845 138 WLDTQFSQCDASNPSHISMLFGREFLTIKIYQLCPPEVINLLRITFIGRAIVLRQIVSYLYLDSDTMQIMLNFIIIIIIT 217 (247)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~D~~~p~~~~~~~~~~~~~ 217 (247)
|+...+.. ..... ..........+.+.+.... .......+.. .....+..+.+|.++..+|......+. +..|
T Consensus 208 fi~~nl~~-~~~~~-s~~w~~nl~~i~~~~~~~~---~~s~~~~l~~-~~~~~pvlfi~g~~S~fv~~~~~~~~~-~~fp 280 (315)
T KOG2382|consen 208 FILTNLKK-SPSDG-SFLWRVNLDSIASLLDEYE---ILSYWADLED-GPYTGPVLFIKGLQSKFVPDEHYPRME-KIFP 280 (315)
T ss_pred HHHHhcCc-CCCCC-ceEEEeCHHHHHHHHHHHH---hhcccccccc-cccccceeEEecCCCCCcChhHHHHHH-Hhcc
Confidence 00000000 00000 0111222222222221110 0011111111 333444556669999999999999998 9999
Q ss_pred CcceeeecCCCccccccChhhHHHHHHhh
Q 025845 218 THMSELINCSRRAFFLYHNTLFIQFVYVL 246 (247)
Q Consensus 218 ~~~~~~i~~~gH~~~~e~p~~~~~~v~~~ 246 (247)
++++..+++|||+.|+|+|+.|++.|.++
T Consensus 281 ~~e~~~ld~aGHwVh~E~P~~~~~~i~~F 309 (315)
T KOG2382|consen 281 NVEVHELDEAGHWVHLEKPEEFIESISEF 309 (315)
T ss_pred chheeecccCCceeecCCHHHHHHHHHHH
Confidence 99999999999999999999999999864
No 40
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.94 E-value=1.6e-26 Score=181.82 Aligned_cols=108 Identities=15% Similarity=0.120 Sum_probs=90.0
Q ss_pred CCCCCCcEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEecCCCCCCCCCccc-CccCHHHhHHHHHHHHHhCCCCCcEEE
Q 025845 4 VVGMEEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIE-DVHTFHAYSEPLMEVLASLPAEEKVIL 82 (247)
Q Consensus 4 ~~~~~~~~iv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~~l~~~i~~l~~~~~~~l 82 (247)
.++++++||||+||++++...+ .+...+...+|+|+++|+||||.|+.+.. ..++.+++++++..+++++ +.+++++
T Consensus 22 ~g~~~~~~lvllHG~~~~~~~~-~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~l~~~l-~~~~~~l 99 (306)
T TIGR01249 22 SGNPDGKPVVFLHGGPGSGTDP-GCRRFFDPETYRIVLFDQRGCGKSTPHACLEENTTWDLVADIEKLREKL-GIKNWLV 99 (306)
T ss_pred CcCCCCCEEEEECCCCCCCCCH-HHHhccCccCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHHc-CCCCEEE
Confidence 3445678999999988776554 33344443579999999999999986542 2367889999999999999 8899999
Q ss_pred EEEehhHHHHHHHHHhCCCccceEEEEeccC
Q 025845 83 VGHSLGGVTLALAADKFPHKISVAVFVTAFM 113 (247)
Q Consensus 83 vGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 113 (247)
+||||||.+++.++.++|++|+++|++++..
T Consensus 100 vG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~ 130 (306)
T TIGR01249 100 FGGSWGSTLALAYAQTHPEVVTGLVLRGIFL 130 (306)
T ss_pred EEECHHHHHHHHHHHHChHhhhhheeecccc
Confidence 9999999999999999999999999998864
No 41
>PLN02511 hydrolase
Probab=99.94 E-value=4.4e-27 Score=189.73 Aligned_cols=232 Identities=10% Similarity=0.002 Sum_probs=138.9
Q ss_pred CCCcEEEEEcCCCCChhh-H-HHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCC---CCCcEE
Q 025845 7 MEEKHFVLVHGVNHGAWC-W-YKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLP---AEEKVI 81 (247)
Q Consensus 7 ~~~~~iv~lhG~~~~~~~-~-~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~---~~~~~~ 81 (247)
.++|+||++||++++... | ..++..+.++||+|+++|+||||.|+..... .....+++|+.++++++. ...+++
T Consensus 98 ~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~~~-~~~~~~~~Dl~~~i~~l~~~~~~~~~~ 176 (388)
T PLN02511 98 ADAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVTTPQ-FYSASFTGDLRQVVDHVAGRYPSANLY 176 (388)
T ss_pred CCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCCCcC-EEcCCchHHHHHHHHHHHHHCCCCCEE
Confidence 457899999999876543 4 5677766668999999999999999765432 233566778887777771 236899
Q ss_pred EEEEehhHHHHHHHHHhCCCc--cceEEEEeccCCCCCCC------hHHHHH-HHHHhhcCCCCcccccc---ccccc--
Q 025845 82 LVGHSLGGVTLALAADKFPHK--ISVAVFVTAFMPDTTHR------PSFVLE-QYSEKMGKEDDSWLDTQ---FSQCD-- 147 (247)
Q Consensus 82 lvGhS~Gg~ia~~~a~~~p~~--v~~lvl~~~~~~~~~~~------~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~-- 147 (247)
++||||||.+++.++.++|++ |.++++++++....... ...... .+...+ ....... +....
T Consensus 177 lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~~~~~~~~~~~~~~y~~~~~~~l----~~~~~~~~~~~~~~~~~ 252 (388)
T PLN02511 177 AAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLVIADEDFHKGFNNVYDKALAKAL----RKIFAKHALLFEGLGGE 252 (388)
T ss_pred EEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCHHHHHHHHhccHHHHHHHHHHHHH----HHHHHHHHHHHhhCCCc
Confidence 999999999999999999987 88888887643210000 000000 011110 0000000 00000
Q ss_pred CCCCcccceeechhhHHHHHhc----CCCcc-hhhhhhhhhcccchhHHhhhhhhccchhHHHHHH-HHHHHhhcCCcce
Q 025845 148 ASNPSHISMLFGREFLTIKIYQ----LCPPE-VINLLRITFIGRAIVLRQIVSYLYLDSDTMQIML-NFIIIIIITTHMS 221 (247)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~~~~~~~~~~~l~~g~~D~~~p~~~~-~~~~~~~~~~~~~ 221 (247)
.+.. ..........+.+.+.. ....+ .+...........+.++.++.+|++|.++|.... ..+. ..+|++++
T Consensus 253 ~~~~-~~~~~~~~~~fd~~~t~~~~gf~~~~~yy~~~s~~~~L~~I~vPtLiI~g~dDpi~p~~~~~~~~~-~~~p~~~l 330 (388)
T PLN02511 253 YNIP-LVANAKTVRDFDDGLTRVSFGFKSVDAYYSNSSSSDSIKHVRVPLLCIQAANDPIAPARGIPREDI-KANPNCLL 330 (388)
T ss_pred cCHH-HHHhCCCHHHHHHhhhhhcCCCCCHHHHHHHcCchhhhccCCCCeEEEEcCCCCcCCcccCcHhHH-hcCCCEEE
Confidence 0000 00000000001111100 01000 0111112334566778888888999999998765 3455 77899999
Q ss_pred eeecCCCccccccChhhH------HHHHHh
Q 025845 222 ELINCSRRAFFLYHNTLF------IQFVYV 245 (247)
Q Consensus 222 ~~i~~~gH~~~~e~p~~~------~~~v~~ 245 (247)
++++++||++|+|+|+.+ .+.|.+
T Consensus 331 ~~~~~gGH~~~~E~p~~~~~~~w~~~~i~~ 360 (388)
T PLN02511 331 IVTPSGGHLGWVAGPEAPFGAPWTDPVVME 360 (388)
T ss_pred EECCCcceeccccCCCCCCCCccHHHHHHH
Confidence 999999999999999763 555544
No 42
>PRK05855 short chain dehydrogenase; Validated
Probab=99.93 E-value=1.5e-25 Score=191.20 Aligned_cols=239 Identities=14% Similarity=0.017 Sum_probs=142.5
Q ss_pred CCCCCCcEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEecCCCCCCCCCccc-CccCHHHhHHHHHHHHHhCCCCC-cEE
Q 025845 4 VVGMEEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIE-DVHTFHAYSEPLMEVLASLPAEE-KVI 81 (247)
Q Consensus 4 ~~~~~~~~iv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~~l~~~i~~l~~~~-~~~ 81 (247)
.+++++|+|||+||++++...|.++++.|. ++|+|+++|+||||.|+.+.. ..++++++++|+.++++++ +.. +++
T Consensus 20 ~g~~~~~~ivllHG~~~~~~~w~~~~~~L~-~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~a~dl~~~i~~l-~~~~~~~ 97 (582)
T PRK05855 20 WGDPDRPTVVLVHGYPDNHEVWDGVAPLLA-DRFRVVAYDVRGAGRSSAPKRTAAYTLARLADDFAAVIDAV-SPDRPVH 97 (582)
T ss_pred cCCCCCCeEEEEcCCCchHHHHHHHHHHhh-cceEEEEecCCCCCCCCCCCcccccCHHHHHHHHHHHHHHh-CCCCcEE
Confidence 345568999999999999999999999996 689999999999999986542 3579999999999999999 554 599
Q ss_pred EEEEehhHHHHHHHHHh--CCCccceEEEEeccCCCCC-------C---ChH---HHHHHHHHhh--cCCCCcccccccc
Q 025845 82 LVGHSLGGVTLALAADK--FPHKISVAVFVTAFMPDTT-------H---RPS---FVLEQYSEKM--GKEDDSWLDTQFS 144 (247)
Q Consensus 82 lvGhS~Gg~ia~~~a~~--~p~~v~~lvl~~~~~~~~~-------~---~~~---~~~~~~~~~~--~~~~~~~~~~~~~ 144 (247)
|+||||||.+++.++.+ .++++..++.++++..... . ... .....+.... .......+.....
T Consensus 98 lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (582)
T PRK05855 98 LLAHDWGSIQGWEAVTRPRAAGRIASFTSVSGPSLDHVGFWLRSGLRRPTPRRLARALGQLLRSWYIYLFHLPVLPELLW 177 (582)
T ss_pred EEecChHHHHHHHHHhCccchhhhhhheeccCCchHHHHHHHhhcccccchhhhhHHHHHHhhhHHHHHHhCCCCcHHHh
Confidence 99999999999988876 3455655555543211000 0 000 0000000000 0000000000000
Q ss_pred cccCCCCccc----cee-echhhHHHHHhcCCCcchhhhhhh------hhcccchhHHhhhhhhccchhHHHHHHHHHHH
Q 025845 145 QCDASNPSHI----SML-FGREFLTIKIYQLCPPEVINLLRI------TFIGRAIVLRQIVSYLYLDSDTMQIMLNFIII 213 (247)
Q Consensus 145 ~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~l~~g~~D~~~p~~~~~~~~~ 213 (247)
.......... ... ........................ .......+++..+..|++|.++|....+.+.
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~- 256 (582)
T PRK05855 178 RLGLGRAWPRLLRRVEGTPVDPIPTQTTLSDGAHGVKLYRANMIRSLSRPRERYTDVPVQLIVPTGDPYVRPALYDDLS- 256 (582)
T ss_pred ccchhhHHHHhhhhccCCCcchhhhhhhhccccchHHHHHhhhhhhhccCccCCccCceEEEEeCCCcccCHHHhcccc-
Confidence 0000000000 000 000000000000000000000000 0011225667777889999999999999888
Q ss_pred hhcCCcceeeecCCCccccccChhhHHHHHHhh
Q 025845 214 IIITTHMSELINCSRRAFFLYHNTLFIQFVYVL 246 (247)
Q Consensus 214 ~~~~~~~~~~i~~~gH~~~~e~p~~~~~~v~~~ 246 (247)
+.+++.++++++ +||++++|+|++|++.|..+
T Consensus 257 ~~~~~~~~~~~~-~gH~~~~e~p~~~~~~i~~f 288 (582)
T PRK05855 257 RWVPRLWRREIK-AGHWLPMSHPQVLAAAVAEF 288 (582)
T ss_pred ccCCcceEEEcc-CCCcchhhChhHHHHHHHHH
Confidence 888888888886 79999999999999998765
No 43
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.93 E-value=1.9e-24 Score=167.75 Aligned_cols=234 Identities=16% Similarity=0.075 Sum_probs=151.1
Q ss_pred cEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEecCCCCCCCC-CcccCccCHHHhHHHHHHHHHhCC---CCCcEEEEEE
Q 025845 10 KHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINM-KRIEDVHTFHAYSEPLMEVLASLP---AEEKVILVGH 85 (247)
Q Consensus 10 ~~iv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~-~~~~~~~~~~~~~~~l~~~i~~l~---~~~~~~lvGh 85 (247)
.+||++||++.+..-|..++..|..+||.|+++|+||||.|. .......++.++.+|+.++++... ...+++|+||
T Consensus 35 g~Vvl~HG~~Eh~~ry~~la~~l~~~G~~V~~~D~RGhG~S~r~~rg~~~~f~~~~~dl~~~~~~~~~~~~~~p~~l~gH 114 (298)
T COG2267 35 GVVVLVHGLGEHSGRYEELADDLAARGFDVYALDLRGHGRSPRGQRGHVDSFADYVDDLDAFVETIAEPDPGLPVFLLGH 114 (298)
T ss_pred cEEEEecCchHHHHHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCcCCchhHHHHHHHHHHHHHHHhccCCCCCeEEEEe
Confidence 689999999999999999999999999999999999999998 555555679999999999999872 3589999999
Q ss_pred ehhHHHHHHHHHhCCCccceEEEEeccCCCCCCChHHHHHHHHHhhcCCCCcccccccccc-cCCCCcccceeechhhHH
Q 025845 86 SLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQC-DASNPSHISMLFGREFLT 164 (247)
Q Consensus 86 S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 164 (247)
||||.|++.++.+++.+|+++|+.+|.................... +..+........ .....+......++...+
T Consensus 115 SmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~~~~~~~~~~~~~~~---~~~~~p~~~~~~~~~~~~~~~~~sr~~~~~~ 191 (298)
T COG2267 115 SMGGLIALLYLARYPPRIDGLVLSSPALGLGGAILRLILARLALKL---LGRIRPKLPVDSNLLEGVLTDDLSRDPAEVA 191 (298)
T ss_pred CcHHHHHHHHHHhCCccccEEEEECccccCChhHHHHHHHHHhccc---ccccccccccCcccccCcCcchhhcCHHHHH
Confidence 9999999999999999999999999875443301111111111111 111111000000 000000001122223333
Q ss_pred HHHhcCC-Ccc---hhhh------h--hhhhcccchhHHhhhhhhccchhHH-HHHHHHHH-HhhcCCcceeeecCCCcc
Q 025845 165 IKIYQLC-PPE---VINL------L--RITFIGRAIVLRQIVSYLYLDSDTM-QIMLNFII-IIIITTHMSELINCSRRA 230 (247)
Q Consensus 165 ~~~~~~~-~~~---~~~~------~--~~~~~~~~~~~~~~l~~g~~D~~~p-~~~~~~~~-~~~~~~~~~~~i~~~gH~ 230 (247)
.+..+.. ... .... . ..........++.++.+|+.|.+++ .+...++. ....++.++.+++++.|.
T Consensus 192 ~~~~dP~~~~~~~~~~w~~~~~~a~~~~~~~~~~~~~~PvLll~g~~D~vv~~~~~~~~~~~~~~~~~~~~~~~~g~~He 271 (298)
T COG2267 192 AYEADPLIGVGGPVSRWVDLALLAGRVPALRDAPAIALPVLLLQGGDDRVVDNVEGLARFFERAGSPDKELKVIPGAYHE 271 (298)
T ss_pred HHhcCCccccCCccHHHHHHHHHhhcccchhccccccCCEEEEecCCCccccCcHHHHHHHHhcCCCCceEEecCCcchh
Confidence 2222211 111 0000 0 1112244566777888899999999 45555443 234677899999999999
Q ss_pred ccccCh---hhHHHHHHhh
Q 025845 231 FFLYHN---TLFIQFVYVL 246 (247)
Q Consensus 231 ~~~e~p---~~~~~~v~~~ 246 (247)
.+.|.+ +++.+.+..+
T Consensus 272 ~~~E~~~~r~~~~~~~~~~ 290 (298)
T COG2267 272 LLNEPDRAREEVLKDILAW 290 (298)
T ss_pred hhcCcchHHHHHHHHHHHH
Confidence 999866 4555555544
No 44
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.93 E-value=2.7e-24 Score=152.75 Aligned_cols=214 Identities=17% Similarity=0.081 Sum_probs=149.2
Q ss_pred CcEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhC--CCCCcEEEEEEe
Q 025845 9 EKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASL--PAEEKVILVGHS 86 (247)
Q Consensus 9 ~~~iv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l--~~~~~~~lvGhS 86 (247)
+..|+||||+.|+....+.+.+.|.++||.|.+|.+||||..+..-.. .+..+|.+++.+..++| .+.+.+.++|.|
T Consensus 15 ~~AVLllHGFTGt~~Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~e~fl~-t~~~DW~~~v~d~Y~~L~~~gy~eI~v~GlS 93 (243)
T COG1647 15 NRAVLLLHGFTGTPRDVRMLGRYLNENGYTVYAPRYPGHGTLPEDFLK-TTPRDWWEDVEDGYRDLKEAGYDEIAVVGLS 93 (243)
T ss_pred CEEEEEEeccCCCcHHHHHHHHHHHHCCceEecCCCCCCCCCHHHHhc-CCHHHHHHHHHHHHHHHHHcCCCeEEEEeec
Confidence 379999999999999999999999999999999999999988755443 68888888888877776 367899999999
Q ss_pred hhHHHHHHHHHhCCCccceEEEEeccCCCCCCChHHHHHHHHHhhcCCCCcccccccccccCCCCcccceeechhhHHHH
Q 025845 87 LGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFLTIK 166 (247)
Q Consensus 87 ~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (247)
|||.+++.+|..+| ++++|.++++... .+....++.+...+ ..... ....+++.....
T Consensus 94 mGGv~alkla~~~p--~K~iv~m~a~~~~--k~~~~iie~~l~y~---------~~~kk---------~e~k~~e~~~~e 151 (243)
T COG1647 94 MGGVFALKLAYHYP--PKKIVPMCAPVNV--KSWRIIIEGLLEYF---------RNAKK---------YEGKDQEQIDKE 151 (243)
T ss_pred chhHHHHHHHhhCC--ccceeeecCCccc--ccchhhhHHHHHHH---------HHhhh---------ccCCCHHHHHHH
Confidence 99999999999998 9999999986432 22223444443322 00010 111122333322
Q ss_pred HhcCC--Ccchhhhhhhh-----hcccchhHHhhhhhhccchhHHHHHHHHHHHhhc--CCcceeeecCCCccccccC-h
Q 025845 167 IYQLC--PPEVINLLRIT-----FIGRAIVLRQIVSYLYLDSDTMQIMLNFIIIIII--TTHMSELINCSRRAFFLYH-N 236 (247)
Q Consensus 167 ~~~~~--~~~~~~~~~~~-----~~~~~~~~~~~l~~g~~D~~~p~~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e~-p 236 (247)
+.... ..........+ .....+-.+..+.+|++|..+|.+.+..+. ... ...++..+++|||..-.+. -
T Consensus 152 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy-~~v~s~~KeL~~~e~SgHVIt~D~Er 230 (243)
T COG1647 152 MKSYKDTPMTTTAQLKKLIKDARRSLDKIYSPTLVVQGRQDEMVPAESANFIY-DHVESDDKELKWLEGSGHVITLDKER 230 (243)
T ss_pred HHHhhcchHHHHHHHHHHHHHHHhhhhhcccchhheecccCCCCCHHHHHHHH-HhccCCcceeEEEccCCceeecchhH
Confidence 22211 11111111111 123334456667779999999999999987 554 3468999999999977764 4
Q ss_pred hhHHHHHHhh
Q 025845 237 TLFIQFVYVL 246 (247)
Q Consensus 237 ~~~~~~v~~~ 246 (247)
+++.+.|+.+
T Consensus 231 d~v~e~V~~F 240 (243)
T COG1647 231 DQVEEDVITF 240 (243)
T ss_pred HHHHHHHHHH
Confidence 6677776653
No 45
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.91 E-value=6e-24 Score=170.41 Aligned_cols=235 Identities=14% Similarity=0.116 Sum_probs=142.8
Q ss_pred CcEEEEEcCCCCChhh-------------HHHHHH---HHHhCCcEEEEecCCCCCCCCCc-----------c-------
Q 025845 9 EKHFVLVHGVNHGAWC-------------WYKLKA---RLVAGGHRVTAVDLAASGINMKR-----------I------- 54 (247)
Q Consensus 9 ~~~iv~lhG~~~~~~~-------------~~~~~~---~l~~~g~~vi~~D~~G~G~S~~~-----------~------- 54 (247)
.+.||++|++.++.+. |+.++. .|.-..|.||++|..|-|.|..| +
T Consensus 56 ~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~g~tgp~s~~p~tg~~~~ 135 (389)
T PRK06765 56 SNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNVITTGPASINPKTGKPYG 135 (389)
T ss_pred CCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCCCCCCCCCCCcCCCCccC
Confidence 4799999999986532 766663 34334599999999998764322 0
Q ss_pred --cCccCHHHhHHHHHHHHHhCCCCCcEE-EEEEehhHHHHHHHHHhCCCccceEEEEeccCCCCCCChHHHHHHHHHhh
Q 025845 55 --EDVHTFHAYSEPLMEVLASLPAEEKVI-LVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKM 131 (247)
Q Consensus 55 --~~~~~~~~~~~~l~~~i~~l~~~~~~~-lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 131 (247)
-..+++.++++++.++++++ ++++++ ++||||||++++++|.++|++|+++|++++.............+.....+
T Consensus 136 ~~fP~~t~~d~~~~~~~ll~~l-gi~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia~~~~~~~~~~~~~~~~~~~ai 214 (389)
T PRK06765 136 MDFPVVTILDFVRVQKELIKSL-GIARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVIGNPQNDAWTSVNVLQNWAEAI 214 (389)
T ss_pred CCCCcCcHHHHHHHHHHHHHHc-CCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEecCCCCChhHHHHHHHHHHHHH
Confidence 12379999999999999999 899987 99999999999999999999999999998864332221011222222111
Q ss_pred cCCCCcc-------------------------------cccccccccCCCCcccc---eeech-hhHHHH---Hhc-CCC
Q 025845 132 GKEDDSW-------------------------------LDTQFSQCDASNPSHIS---MLFGR-EFLTIK---IYQ-LCP 172 (247)
Q Consensus 132 ~~~~~~~-------------------------------~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~---~~~-~~~ 172 (247)
. ....| ++..+.........+.. ..... ..+... +.. ...
T Consensus 215 ~-~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~~~f~r~~~~~~~~~~~~~~~~~~e~yl~~~~~~~~~~~Da 293 (389)
T PRK06765 215 R-LDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYETTFPRNASIEVDPYEKVSTLTSFEKEINKATYRRAELVDA 293 (389)
T ss_pred H-hCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHHHHcCcCccccccccccccchhhHHHHHHHHHHHhhhccCh
Confidence 0 00011 00000000000000000 00000 000000 000 000
Q ss_pred cchhhhhhhh-------------hcccchhHHhhhhhhccchhHHHHHHHHHHHhhcC----CcceeeecC-CCcccccc
Q 025845 173 PEVINLLRIT-------------FIGRAIVLRQIVSYLYLDSDTMQIMLNFIIIIIIT----THMSELINC-SRRAFFLY 234 (247)
Q Consensus 173 ~~~~~~~~~~-------------~~~~~~~~~~~l~~g~~D~~~p~~~~~~~~~~~~~----~~~~~~i~~-~gH~~~~e 234 (247)
.....+...+ .....+..+.++..|+.|.++|....+.+. +.++ +++++++++ +||.+++|
T Consensus 294 n~~l~l~~a~~~~d~g~~~~dl~~~L~~I~~PtLvI~G~~D~l~p~~~~~~la-~~lp~~~~~a~l~~I~s~~GH~~~le 372 (389)
T PRK06765 294 NHWLYLAKAVQLFDAGHGFSSLEEALSNIEANVLMIPCKQDLLQPPRYNYKMV-DILQKQGKYAEVYEIESINGHMAGVF 372 (389)
T ss_pred hhHHHHHHHHHhcCCccccCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHH-HHhhhcCCCeEEEEECCCCCcchhhc
Confidence 1111111111 112233444455559999999999999888 7775 689999996 99999999
Q ss_pred ChhhHHHHHHhh
Q 025845 235 HNTLFIQFVYVL 246 (247)
Q Consensus 235 ~p~~~~~~v~~~ 246 (247)
+|++|++.|..+
T Consensus 373 ~p~~~~~~I~~F 384 (389)
T PRK06765 373 DIHLFEKKIYEF 384 (389)
T ss_pred CHHHHHHHHHHH
Confidence 999999999875
No 46
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.91 E-value=5.4e-23 Score=166.80 Aligned_cols=213 Identities=13% Similarity=0.100 Sum_probs=138.3
Q ss_pred CCcEEEEEcCCCCCh-hhHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCC--CCCcEEEEE
Q 025845 8 EEKHFVLVHGVNHGA-WCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLP--AEEKVILVG 84 (247)
Q Consensus 8 ~~~~iv~lhG~~~~~-~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~--~~~~~~lvG 84 (247)
..|.||+.||+.+.. ..|..+++.|+++||.|+++|+||+|.|..... ..+.....+.+.+.+.... +.+++.++|
T Consensus 193 ~~P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~~-~~d~~~~~~avld~l~~~~~vd~~ri~l~G 271 (414)
T PRK05077 193 PFPTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWKL-TQDSSLLHQAVLNALPNVPWVDHTRVAAFG 271 (414)
T ss_pred CccEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCc-cccHHHHHHHHHHHHHhCcccCcccEEEEE
Confidence 445666666666553 578889999998999999999999999975432 1345555566766666552 457999999
Q ss_pred EehhHHHHHHHHHhCCCccceEEEEeccCCCCCCChHHHHHHHHHhhcCCCCcccccccccccCCCCcccceeechhhHH
Q 025845 85 HSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFLT 164 (247)
Q Consensus 85 hS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (247)
|||||.+++.+|..+|++++++|++++.......... ....+... +........... ....+.+.
T Consensus 272 ~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~~~~~~-~~~~~p~~-------~~~~la~~lg~~-------~~~~~~l~ 336 (414)
T PRK05077 272 FRFGANVAVRLAYLEPPRLKAVACLGPVVHTLLTDPK-RQQQVPEM-------YLDVLASRLGMH-------DASDEALR 336 (414)
T ss_pred EChHHHHHHHHHHhCCcCceEEEEECCccchhhcchh-hhhhchHH-------HHHHHHHHhCCC-------CCChHHHH
Confidence 9999999999999999999999999886432111111 11110000 000000000000 00111111
Q ss_pred HHHhcCCCcchhhhhhhhhcccchhHHhhhhhhccchhHHHHHHHHHHHhhcCCcceeeecCCCccccccChhhHHHHHH
Q 025845 165 IKIYQLCPPEVINLLRITFIGRAIVLRQIVSYLYLDSDTMQIMLNFIIIIIITTHMSELINCSRRAFFLYHNTLFIQFVY 244 (247)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~D~~~p~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~v~ 244 (247)
..+........ . . ....+..+.++..|++|.++|.+..+.+. ..+++++++++|++ ++.+.|+++.+.+.
T Consensus 337 ~~l~~~sl~~~-~----~-l~~~i~~PvLiI~G~~D~ivP~~~a~~l~-~~~~~~~l~~i~~~---~~~e~~~~~~~~i~ 406 (414)
T PRK05077 337 VELNRYSLKVQ-G----L-LGRRCPTPMLSGYWKNDPFSPEEDSRLIA-SSSADGKLLEIPFK---PVYRNFDKALQEIS 406 (414)
T ss_pred HHhhhccchhh-h----h-hccCCCCcEEEEecCCCCCCCHHHHHHHH-HhCCCCeEEEccCC---CccCCHHHHHHHHH
Confidence 11111110000 0 0 01346677788889999999999999888 88999999999997 67899999999998
Q ss_pred hh
Q 025845 245 VL 246 (247)
Q Consensus 245 ~~ 246 (247)
+|
T Consensus 407 ~w 408 (414)
T PRK05077 407 DW 408 (414)
T ss_pred HH
Confidence 75
No 47
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.91 E-value=4.3e-23 Score=159.56 Aligned_cols=228 Identities=10% Similarity=-0.033 Sum_probs=136.6
Q ss_pred CCCcEEEEEcCCCC----ChhhHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhC----CCCC
Q 025845 7 MEEKHFVLVHGVNH----GAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASL----PAEE 78 (247)
Q Consensus 7 ~~~~~iv~lhG~~~----~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l----~~~~ 78 (247)
.+++++|++||... +...|..+++.|+++||+|+++|+||||.|+... .+++++.+|+.+.++.+ .+.+
T Consensus 24 ~~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~---~~~~~~~~d~~~~~~~l~~~~~g~~ 100 (274)
T TIGR03100 24 SHTTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGEN---LGFEGIDADIAAAIDAFREAAPHLR 100 (274)
T ss_pred CCCCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC---CCHHHHHHHHHHHHHHHHhhCCCCC
Confidence 45678888888753 4455778899999889999999999999997543 46777888888887776 1457
Q ss_pred cEEEEEEehhHHHHHHHHHhCCCccceEEEEeccCCCCCCChHHHHHHHHHhhcCCCCcccccccccccCCCCcccceee
Q 025845 79 KVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLF 158 (247)
Q Consensus 79 ~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (247)
+++++||||||.+++.+|.. +++|+++|+++++..............+..... ....++.... .+.. . ....
T Consensus 101 ~i~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~----~g~~-~-~~~~ 172 (274)
T TIGR03100 101 RIVAWGLCDAASAALLYAPA-DLRVAGLVLLNPWVRTEAAQAASRIRHYYLGQL-LSADFWRKLL----SGEV-N-LGSS 172 (274)
T ss_pred cEEEEEECHHHHHHHHHhhh-CCCccEEEEECCccCCcccchHHHHHHHHHHHH-hChHHHHHhc----CCCc-c-HHHH
Confidence 79999999999999999865 568999999998744322222212222211110 0111111111 0100 0 0000
Q ss_pred chhhHHHHH-h-c-CCCcchhhhhhhh-hcccchhHHhhhhhhccchhHHHHHH-----HHHHHhhc--CCcceeeecCC
Q 025845 159 GREFLTIKI-Y-Q-LCPPEVINLLRIT-FIGRAIVLRQIVSYLYLDSDTMQIML-----NFIIIIII--TTHMSELINCS 227 (247)
Q Consensus 159 ~~~~~~~~~-~-~-~~~~~~~~~~~~~-~~~~~~~~~~~l~~g~~D~~~p~~~~-----~~~~~~~~--~~~~~~~i~~~ 227 (247)
......... . . ............+ ......+.+.++..|+.|...+.... +.+. ..+ ++++++.++++
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~P~ll~~g~~D~~~~~~~~~~~~~~~~~-~~l~~~~v~~~~~~~~ 251 (274)
T TIGR03100 173 LRGLGDALLKARQKGDEVAHGGLAERMKAGLERFQGPVLFILSGNDLTAQEFADSVLGEPAWR-GALEDPGIERVEIDGA 251 (274)
T ss_pred HHHHHHHHHhhhhcCCCcccchHHHHHHHHHHhcCCcEEEEEcCcchhHHHHHHHhccChhhH-HHhhcCCeEEEecCCC
Confidence 011111000 0 0 0000111111111 12223356666777999988753321 4444 444 89999999999
Q ss_pred CccccccCh-hhHHHHHHhh
Q 025845 228 RRAFFLYHN-TLFIQFVYVL 246 (247)
Q Consensus 228 gH~~~~e~p-~~~~~~v~~~ 246 (247)
||++..|.+ +++.+.|..|
T Consensus 252 ~H~l~~e~~~~~v~~~i~~w 271 (274)
T TIGR03100 252 DHTFSDRVWREWVAARTTEW 271 (274)
T ss_pred CcccccHHHHHHHHHHHHHH
Confidence 999866665 8899988775
No 48
>PRK10985 putative hydrolase; Provisional
Probab=99.91 E-value=7.4e-24 Score=167.72 Aligned_cols=223 Identities=14% Similarity=0.014 Sum_probs=125.7
Q ss_pred CCCcEEEEEcCCCCChh--hHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCcc---CHHHhHHHHHHHHHhCCCCCcEE
Q 025845 7 MEEKHFVLVHGVNHGAW--CWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVH---TFHAYSEPLMEVLASLPAEEKVI 81 (247)
Q Consensus 7 ~~~~~iv~lhG~~~~~~--~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~---~~~~~~~~l~~~i~~l~~~~~~~ 81 (247)
.++|+||++||++++.. .+..++..|.++||+|+++|+||||.++......+ ..++..+.+..+.+.+ +.++++
T Consensus 56 ~~~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~~~~~~~~~~D~~~~i~~l~~~~-~~~~~~ 134 (324)
T PRK10985 56 RHKPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLHRIYHSGETEDARFFLRWLQREF-GHVPTA 134 (324)
T ss_pred CCCCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCCcceECCCchHHHHHHHHHHHHhC-CCCCEE
Confidence 35689999999987744 35678899999999999999999998864322111 2333333333344445 667899
Q ss_pred EEEEehhHHHHHHHHHhCCCc--cceEEEEeccCCCCCCC------hHHHHHH-HHHhhcCCCCcccccccccccCCCCc
Q 025845 82 LVGHSLGGVTLALAADKFPHK--ISVAVFVTAFMPDTTHR------PSFVLEQ-YSEKMGKEDDSWLDTQFSQCDASNPS 152 (247)
Q Consensus 82 lvGhS~Gg~ia~~~a~~~p~~--v~~lvl~~~~~~~~~~~------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (247)
++||||||.+++.++.++++. +.++|+++++....... ....... +...+ .................
T Consensus 135 ~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~~~~~~~~~~~~~~~~~l~~~l----~~~~~~~~~~~~~~~~~ 210 (324)
T PRK10985 135 AVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEACSYRMEQGFSRVYQRYLLNLL----KANAARKLAAYPGTLPI 210 (324)
T ss_pred EEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHHHHHHHhhhHHHHHHHHHHHHH----HHHHHHHHHhccccccC
Confidence 999999999888888777543 89999998853211100 0001111 00000 00000000000000000
Q ss_pred ccceeechhhHH---HHHhcC----CC-cchhhhhhhhhcccchhHHhhhhhhccchhHHHHHHHHHHHhhcCCcceeee
Q 025845 153 HISMLFGREFLT---IKIYQL----CP-PEVINLLRITFIGRAIVLRQIVSYLYLDSDTMQIMLNFIIIIIITTHMSELI 224 (247)
Q Consensus 153 ~~~~~~~~~~~~---~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~l~~g~~D~~~p~~~~~~~~~~~~~~~~~~~i 224 (247)
..........+. +.+... .. .+.............+.++.++..|++|.+++.+....+. +..++.+++++
T Consensus 211 ~~~~~~~~~~~~~fd~~~~~~~~g~~~~~~~y~~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~-~~~~~~~~~~~ 289 (324)
T PRK10985 211 NLAQLKSVRRLREFDDLITARIHGFADAIDYYRQCSALPLLNQIRKPTLIIHAKDDPFMTHEVIPKPE-SLPPNVEYQLT 289 (324)
T ss_pred CHHHHhcCCcHHHHhhhheeccCCCCCHHHHHHHCChHHHHhCCCCCEEEEecCCCCCCChhhChHHH-HhCCCeEEEEC
Confidence 000000000000 011000 00 0000111111223455566777779999999988887776 77899999999
Q ss_pred cCCCccccccC
Q 025845 225 NCSRRAFFLYH 235 (247)
Q Consensus 225 ~~~gH~~~~e~ 235 (247)
+++||++++|-
T Consensus 290 ~~~GH~~~~~g 300 (324)
T PRK10985 290 EHGGHVGFVGG 300 (324)
T ss_pred CCCCceeeCCC
Confidence 99999999984
No 49
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.90 E-value=2.1e-22 Score=150.18 Aligned_cols=222 Identities=16% Similarity=0.100 Sum_probs=147.2
Q ss_pred cEEEEEcCCCCCh-hhHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhC-----CCCCcEEEE
Q 025845 10 KHFVLVHGVNHGA-WCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASL-----PAEEKVILV 83 (247)
Q Consensus 10 ~~iv~lhG~~~~~-~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l-----~~~~~~~lv 83 (247)
-.|+|+||++... ..|..++..|+..||.|+++|++|||.|++.....-+++..++|+.+.++.. +...+..|.
T Consensus 55 ~lv~~~HG~g~~~s~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl~~yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~ 134 (313)
T KOG1455|consen 55 GLVFLCHGYGEHSSWRYQSTAKRLAKSGFAVYAIDYEGHGRSDGLHAYVPSFDLVVDDVISFFDSIKEREENKGLPRFLF 134 (313)
T ss_pred eEEEEEcCCcccchhhHHHHHHHHHhCCCeEEEeeccCCCcCCCCcccCCcHHHHHHHHHHHHHHHhhccccCCCCeeee
Confidence 3789999999876 6789999999999999999999999999987776779999999999988863 356799999
Q ss_pred EEehhHHHHHHHHHhCCCccceEEEEeccCCCCCCC-hHHHHHHHHHhhcCCCCcccccccccccCCCCcccceeechhh
Q 025845 84 GHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHR-PSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREF 162 (247)
Q Consensus 84 GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (247)
||||||.|++.++.+.|+...++|++++-.+..... +......+...+..-...|- . .+.+.+......+++.
T Consensus 135 GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~kp~p~v~~~l~~l~~liP~wk----~--vp~~d~~~~~~kdp~~ 208 (313)
T KOG1455|consen 135 GESMGGAVALLIALKDPNFWDGAILVAPMCKISEDTKPHPPVISILTLLSKLIPTWK----I--VPTKDIIDVAFKDPEK 208 (313)
T ss_pred ecCcchHHHHHHHhhCCcccccceeeecccccCCccCCCcHHHHHHHHHHHhCCcee----e--cCCccccccccCCHHH
Confidence 999999999999999999999999999853332222 22333333332200112221 0 0000000011112222
Q ss_pred HHHHHhcC-CCcchhhh----------hhhhhcccchhHHhhhhhhccchhHHHHHHHHHHHhhc--CCcceeeecCCCc
Q 025845 163 LTIKIYQL-CPPEVINL----------LRITFIGRAIVLRQIVSYLYLDSDTMQIMLNFIIIIII--TTHMSELINCSRR 229 (247)
Q Consensus 163 ~~~~~~~~-~~~~~~~~----------~~~~~~~~~~~~~~~l~~g~~D~~~p~~~~~~~~~~~~--~~~~~~~i~~~gH 229 (247)
......+. +.....++ ...........++-.+.+|+.|.++.++.++.+. +.- .+.++.++|+.=|
T Consensus 209 r~~~~~npl~y~g~pRl~T~~ElLr~~~~le~~l~~vtvPflilHG~dD~VTDp~~Sk~Ly-e~A~S~DKTlKlYpGm~H 287 (313)
T KOG1455|consen 209 RKILRSDPLCYTGKPRLKTAYELLRVTADLEKNLNEVTVPFLILHGTDDKVTDPKVSKELY-EKASSSDKTLKLYPGMWH 287 (313)
T ss_pred HHHhhcCCceecCCccHHHHHHHHHHHHHHHHhcccccccEEEEecCCCcccCcHHHHHHH-HhccCCCCceeccccHHH
Confidence 22222111 11111011 1111234455566666779999999999999987 653 5688999999999
Q ss_pred cccccChhh
Q 025845 230 AFFLYHNTL 238 (247)
Q Consensus 230 ~~~~e~p~~ 238 (247)
..+.=+|++
T Consensus 288 ~Ll~gE~~e 296 (313)
T KOG1455|consen 288 SLLSGEPDE 296 (313)
T ss_pred HhhcCCCch
Confidence 988733333
No 50
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.90 E-value=4.1e-24 Score=161.31 Aligned_cols=204 Identities=16% Similarity=0.108 Sum_probs=126.6
Q ss_pred cEEEEecCCCCCCCCC---cccCccCHHHhHHHHHHHHHhCCCCCcEEEEEEehhHHHHHHHHHhCCCccceEEEEeccC
Q 025845 37 HRVTAVDLAASGINMK---RIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFM 113 (247)
Q Consensus 37 ~~vi~~D~~G~G~S~~---~~~~~~~~~~~~~~l~~~i~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 113 (247)
|+|+++|+||+|.|++ .....++.+++++++..+++.+ +.++++++||||||.+++.+|.++|++|+++|++++..
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~~~~~ 79 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREAL-GIKKINLVGHSMGGMLALEYAAQYPERVKKLVLISPPP 79 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHH-TTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESESS
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHh-CCCCeEEEEECCChHHHHHHHHHCchhhcCcEEEeeec
Confidence 7899999999999996 4455689999999999999999 88889999999999999999999999999999999852
Q ss_pred --CC--CCCChH--HHHHHHHHhh----cCCCCcccccccc-cccCCCCcccceeechhhHHHHHhcCC-Cc--------
Q 025845 114 --PD--TTHRPS--FVLEQYSEKM----GKEDDSWLDTQFS-QCDASNPSHISMLFGREFLTIKIYQLC-PP-------- 173 (247)
Q Consensus 114 --~~--~~~~~~--~~~~~~~~~~----~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-------- 173 (247)
.. ...... .....+.... ............. ...... ................... ..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (230)
T PF00561_consen 80 DLPDGLWNRIWPRGNLQGQLLDNFFNFLSDPIKPLLGRWPKQFFAYDR--EFVEDFLKQFQSQQYARFAETDAFDNMFWN 157 (230)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHTHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred cchhhhhHHHHhhhhhhhhHHHhhhccccccchhhhhhhhhheeeccC--ccccchhhccchhhhhHHHHHHHHhhhccc
Confidence 00 000000 0000000000 0000000000000 000000 0000000000000000000 00
Q ss_pred --chhhhhhhhhcccchhHHhhhhhhccchhHHHHHHHHHHHhhcCCcceeeecCCCccccccChhhHHHHHH
Q 025845 174 --EVINLLRITFIGRAIVLRQIVSYLYLDSDTMQIMLNFIIIIIITTHMSELINCSRRAFFLYHNTLFIQFVY 244 (247)
Q Consensus 174 --~~~~~~~~~~~~~~~~~~~~l~~g~~D~~~p~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~v~ 244 (247)
.............+++.+..+..|+.|.++|.+....+. +.+|+.++++++++||..++++|+++++.|.
T Consensus 158 ~~~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~~~-~~~~~~~~~~~~~~GH~~~~~~~~~~~~~i~ 229 (230)
T PF00561_consen 158 ALGYFSVWDPSPALSNIKVPTLIIWGEDDPLVPPESSEQLA-KLIPNSQLVLIEGSGHFAFLEGPDEFNEIII 229 (230)
T ss_dssp HHHHHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHHHHHHH-HHSTTEEEEEETTCCSTHHHHSHHHHHHHHH
T ss_pred cccccccccccccccccCCCeEEEEeCCCCCCCHHHHHHHH-HhcCCCEEEECCCCChHHHhcCHHhhhhhhc
Confidence 000111111223345555556669999999999999988 9999999999999999999999999999986
No 51
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.90 E-value=2e-24 Score=151.03 Aligned_cols=215 Identities=15% Similarity=0.140 Sum_probs=159.1
Q ss_pred EEEEEcCCCCCh-hhHHHHHHHHHhC-CcEEEEecCCCCCCCCCcccC--ccCHHHhHHHHHHHHHhCCCCCcEEEEEEe
Q 025845 11 HFVLVHGVNHGA-WCWYKLKARLVAG-GHRVTAVDLAASGINMKRIED--VHTFHAYSEPLMEVLASLPAEEKVILVGHS 86 (247)
Q Consensus 11 ~iv~lhG~~~~~-~~~~~~~~~l~~~-g~~vi~~D~~G~G~S~~~~~~--~~~~~~~~~~l~~~i~~l~~~~~~~lvGhS 86 (247)
.|++++|..|+. ..|.+++..+-+. .+.|+++|.||+|.|.+|... ...+...+++..++++.| +.+++.+.|+|
T Consensus 44 ~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP~Rkf~~~ff~~Da~~avdLM~aL-k~~~fsvlGWS 122 (277)
T KOG2984|consen 44 YILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPERKFEVQFFMKDAEYAVDLMEAL-KLEPFSVLGWS 122 (277)
T ss_pred eeEecccccccccccCCHHHHhcCCCCceEEEEECCCCCCCCCCCcccchHHHHHHhHHHHHHHHHHh-CCCCeeEeeec
Confidence 789999997765 5699988887653 389999999999999887743 346777889999999999 99999999999
Q ss_pred hhHHHHHHHHHhCCCccceEEEEeccCCCCCCChHHHHHHHHHhhcCCCCcccccccccccCCCCcccceeechhhHHHH
Q 025845 87 LGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFLTIK 166 (247)
Q Consensus 87 ~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (247)
-||..|+..|.++++.|.++|+.++..-.. ......++.+... ..|.......+ .....++.++..
T Consensus 123 dGgiTalivAak~~e~v~rmiiwga~ayvn-~~~~ma~kgiRdv-----~kWs~r~R~P~--------e~~Yg~e~f~~~ 188 (277)
T KOG2984|consen 123 DGGITALIVAAKGKEKVNRMIIWGAAAYVN-HLGAMAFKGIRDV-----NKWSARGRQPY--------EDHYGPETFRTQ 188 (277)
T ss_pred CCCeEEEEeeccChhhhhhheeecccceec-chhHHHHhchHHH-----hhhhhhhcchH--------HHhcCHHHHHHH
Confidence 999999999999999999999998863322 2222234443322 34443333321 112222222222
Q ss_pred H----------hcCCCcchhhhhhhhhcccchhHHhhhhhhccchhHHHHHHHHHHHhhcCCcceeeecCCCccccccCh
Q 025845 167 I----------YQLCPPEVINLLRITFIGRAIVLRQIVSYLYLDSDTMQIMLNFIIIIIITTHMSELINCSRRAFFLYHN 236 (247)
Q Consensus 167 ~----------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~D~~~p~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p 236 (247)
+ .+.+.. .. .-.......++..+.+|+.|+.++....-.+. .+.+.+++.++|.++|..++..+
T Consensus 189 wa~wvD~v~qf~~~~dG---~f--Cr~~lp~vkcPtli~hG~kDp~~~~~hv~fi~-~~~~~a~~~~~peGkHn~hLrya 262 (277)
T KOG2984|consen 189 WAAWVDVVDQFHSFCDG---RF--CRLVLPQVKCPTLIMHGGKDPFCGDPHVCFIP-VLKSLAKVEIHPEGKHNFHLRYA 262 (277)
T ss_pred HHHHHHHHHHHhhcCCC---ch--HhhhcccccCCeeEeeCCcCCCCCCCCccchh-hhcccceEEEccCCCcceeeech
Confidence 2 111111 11 12235566788888889999999999999998 88999999999999999999999
Q ss_pred hhHHHHHHhh
Q 025845 237 TLFIQFVYVL 246 (247)
Q Consensus 237 ~~~~~~v~~~ 246 (247)
++|+..++++
T Consensus 263 ~eFnklv~dF 272 (277)
T KOG2984|consen 263 KEFNKLVLDF 272 (277)
T ss_pred HHHHHHHHHH
Confidence 9999999875
No 52
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.89 E-value=2.4e-22 Score=159.29 Aligned_cols=228 Identities=10% Similarity=0.025 Sum_probs=137.7
Q ss_pred CCcEEEEEcCCCCChh-hH-------------------------HHHHHHHHhCCcEEEEecCCCCCCCCCccc---Ccc
Q 025845 8 EEKHFVLVHGVNHGAW-CW-------------------------YKLKARLVAGGHRVTAVDLAASGINMKRIE---DVH 58 (247)
Q Consensus 8 ~~~~iv~lhG~~~~~~-~~-------------------------~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~---~~~ 58 (247)
.+..|+++||++.+.. .+ ..+++.|.++||+|+++|+||||.|+.... ...
T Consensus 20 ~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~~~D~rGHG~S~~~~~~~g~~~ 99 (332)
T TIGR01607 20 AIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVYGLDLQGHGESDGLQNLRGHIN 99 (332)
T ss_pred CeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEEEecccccCCCccccccccchh
Confidence 3458999999998775 21 467899988999999999999999986421 124
Q ss_pred CHHHhHHHHHHHHHhCC----------------------C-CCcEEEEEEehhHHHHHHHHHhCCC--------ccceEE
Q 025845 59 TFHAYSEPLMEVLASLP----------------------A-EEKVILVGHSLGGVTLALAADKFPH--------KISVAV 107 (247)
Q Consensus 59 ~~~~~~~~l~~~i~~l~----------------------~-~~~~~lvGhS~Gg~ia~~~a~~~p~--------~v~~lv 107 (247)
+++++++|+.++++... . ..+++|+||||||.+++.++.++++ .++++|
T Consensus 100 ~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~~~~~~~~~~~~~~~i~g~i 179 (332)
T TIGR01607 100 CFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLLELLGKSNENNDKLNIKGCI 179 (332)
T ss_pred hHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHHHHHhccccccccccccceEE
Confidence 89999999999998641 1 3579999999999999999876542 589999
Q ss_pred EEeccCCCC--C-C---ChHHHHHHHHHhhcCCCCcccccccccccCCCCcccceeechhhHHHHHhcCC------Ccch
Q 025845 108 FVTAFMPDT--T-H---RPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFLTIKIYQLC------PPEV 175 (247)
Q Consensus 108 l~~~~~~~~--~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~ 175 (247)
++++..... . . ........+...+ ..+....... ... .....+.....+..+.. +...
T Consensus 180 ~~s~~~~i~~~~~~~~~~~~~~~~~l~~~~----~~~~p~~~~~--~~~----~~~~~~~~~~~~~~Dp~~~~~~~s~~~ 249 (332)
T TIGR01607 180 SLSGMISIKSVGSDDSFKFKYFYLPVMNFM----SRVFPTFRIS--KKI----RYEKSPYVNDIIKFDKFRYDGGITFNL 249 (332)
T ss_pred EeccceEEecccCCCcchhhhhHHHHHHHH----HHHCCccccc--Ccc----ccccChhhhhHHhcCccccCCcccHHH
Confidence 888752111 0 0 0011111111111 0000000000 000 00000000100000000 0000
Q ss_pred -hhhhhh---h-hcccch--hHHhhhhhhccchhHHHHHHHHHHHhhc--CCcceeeecCCCccccccC-hhhHHHHHHh
Q 025845 176 -INLLRI---T-FIGRAI--VLRQIVSYLYLDSDTMQIMLNFIIIIII--TTHMSELINCSRRAFFLYH-NTLFIQFVYV 245 (247)
Q Consensus 176 -~~~~~~---~-~~~~~~--~~~~~l~~g~~D~~~p~~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e~-p~~~~~~v~~ 245 (247)
..+... . ...... +++.++.+|++|.+++....+.+. +.. ++.++.++++++|.++.|. ++++.+.|..
T Consensus 250 ~~~l~~~~~~~~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~-~~~~~~~~~l~~~~g~~H~i~~E~~~~~v~~~i~~ 328 (332)
T TIGR01607 250 ASELIKATDTLDCDIDYIPKDIPILFIHSKGDCVCSYEGTVSFY-NKLSISNKELHTLEDMDHVITIEPGNEEVLKKIIE 328 (332)
T ss_pred HHHHHHHHHHHHhhHhhCCCCCCEEEEEeCCCCccCHHHHHHHH-HhccCCCcEEEEECCCCCCCccCCCHHHHHHHHHH
Confidence 000000 0 011112 456667779999999999888876 443 6789999999999999986 5888888877
Q ss_pred h
Q 025845 246 L 246 (247)
Q Consensus 246 ~ 246 (247)
|
T Consensus 329 w 329 (332)
T TIGR01607 329 W 329 (332)
T ss_pred H
Confidence 6
No 53
>PRK11071 esterase YqiA; Provisional
Probab=99.88 E-value=2.7e-21 Score=141.09 Aligned_cols=182 Identities=14% Similarity=0.026 Sum_probs=124.6
Q ss_pred cEEEEEcCCCCChhhHHH--HHHHHHh--CCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCCcEEEEEE
Q 025845 10 KHFVLVHGVNHGAWCWYK--LKARLVA--GGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGH 85 (247)
Q Consensus 10 ~~iv~lhG~~~~~~~~~~--~~~~l~~--~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~lvGh 85 (247)
|+|||+||++++...|.. +.+.+.+ .+|+|+++|+||++ ++.++++.++++.+ +.++++++||
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~------------~~~~~~l~~l~~~~-~~~~~~lvG~ 68 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP------------ADAAELLESLVLEH-GGDPLGLVGS 68 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH------------HHHHHHHHHHHHHc-CCCCeEEEEE
Confidence 689999999999999984 4466654 36999999999984 36888999999999 7889999999
Q ss_pred ehhHHHHHHHHHhCCCccceEEEEeccCCCCCCChHHHHHHHHHhhcCCCCcccccccccccCCCCcccceeechhhHHH
Q 025845 86 SLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFLTI 165 (247)
Q Consensus 86 S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (247)
||||.+++.+|.++|. ++|++++... .......+.... ...+. .. .......++.+
T Consensus 69 S~Gg~~a~~~a~~~~~---~~vl~~~~~~-----~~~~~~~~~~~~-----------~~~~~--~~---~~~~~~~~~~d 124 (190)
T PRK11071 69 SLGGYYATWLSQCFML---PAVVVNPAVR-----PFELLTDYLGEN-----------ENPYT--GQ---QYVLESRHIYD 124 (190)
T ss_pred CHHHHHHHHHHHHcCC---CEEEECCCCC-----HHHHHHHhcCCc-----------ccccC--CC---cEEEcHHHHHH
Confidence 9999999999999983 4688887522 111222221110 00000 00 23334444443
Q ss_pred HHhcCCCcchhhhhhhhhcccchhHHhhhhhhccchhHHHHHHHHHHHhhcCCcceeeecCCCccccccChhhHHHHHHh
Q 025845 166 KIYQLCPPEVINLLRITFIGRAIVLRQIVSYLYLDSDTMQIMLNFIIIIIITTHMSELINCSRRAFFLYHNTLFIQFVYV 245 (247)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~D~~~p~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~v~~ 245 (247)
..... .... ....+..+.+|+.|.++|.+.+..+. + ++++.++++++|.. +..+++.+.+..
T Consensus 125 ~~~~~-----------~~~i-~~~~~v~iihg~~De~V~~~~a~~~~-~---~~~~~~~~ggdH~f--~~~~~~~~~i~~ 186 (190)
T PRK11071 125 LKVMQ-----------IDPL-ESPDLIWLLQQTGDEVLDYRQAVAYY-A---ACRQTVEEGGNHAF--VGFERYFNQIVD 186 (190)
T ss_pred HHhcC-----------CccC-CChhhEEEEEeCCCCcCCHHHHHHHH-H---hcceEEECCCCcch--hhHHHhHHHHHH
Confidence 32110 0011 12333346889999999999999987 4 56788999999986 666777777765
Q ss_pred h
Q 025845 246 L 246 (247)
Q Consensus 246 ~ 246 (247)
+
T Consensus 187 f 187 (190)
T PRK11071 187 F 187 (190)
T ss_pred H
Confidence 4
No 54
>PRK13604 luxD acyl transferase; Provisional
Probab=99.88 E-value=5.2e-22 Score=151.82 Aligned_cols=207 Identities=14% Similarity=0.057 Sum_probs=130.6
Q ss_pred CCcEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEecCCCC-CCCCCcccCccCHHHhHHHHHHHHHhC--CCCCcEEEEE
Q 025845 8 EEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAAS-GINMKRIEDVHTFHAYSEPLMEVLASL--PAEEKVILVG 84 (247)
Q Consensus 8 ~~~~iv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~-G~S~~~~~~~~~~~~~~~~l~~~i~~l--~~~~~~~lvG 84 (247)
..++||++||++++...+..+++.|.++||.|+.||++|+ |.|++.... .+.....+|+...++.+ ...+++.|+|
T Consensus 36 ~~~~vIi~HGf~~~~~~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~~~-~t~s~g~~Dl~aaid~lk~~~~~~I~LiG 114 (307)
T PRK13604 36 KNNTILIASGFARRMDHFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTIDE-FTMSIGKNSLLTVVDWLNTRGINNLGLIA 114 (307)
T ss_pred CCCEEEEeCCCCCChHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCcccc-CcccccHHHHHHHHHHHHhcCCCceEEEE
Confidence 4478999999999887899999999999999999999988 999765432 34455567776555554 1567899999
Q ss_pred EehhHHHHHHHHHhCCCccceEEEEeccCCCCCCChHHHHHHHHHhhcCCCCccccccccccc-CCCCcccceee-chhh
Q 025845 85 HSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCD-ASNPSHISMLF-GREF 162 (247)
Q Consensus 85 hS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~ 162 (247)
|||||.+|+..|... .++.+|+.+|..... ..++. .+ ...+.. +.... +.........+ ...+
T Consensus 115 ~SmGgava~~~A~~~--~v~~lI~~sp~~~l~-----d~l~~---~~---~~~~~~--~p~~~lp~~~d~~g~~l~~~~f 179 (307)
T PRK13604 115 ASLSARIAYEVINEI--DLSFLITAVGVVNLR-----DTLER---AL---GYDYLS--LPIDELPEDLDFEGHNLGSEVF 179 (307)
T ss_pred ECHHHHHHHHHhcCC--CCCEEEEcCCcccHH-----HHHHH---hh---hccccc--CcccccccccccccccccHHHH
Confidence 999999997777643 399999888864321 12221 11 000100 00000 00000000111 1233
Q ss_pred HHHHHhcCCCcchhhhhhhhhcccchhHHhhhhhhccchhHHHHHHHHHHHhhcC--CcceeeecCCCccccccCh
Q 025845 163 LTIKIYQLCPPEVINLLRITFIGRAIVLRQIVSYLYLDSDTMQIMLNFIIIIIIT--THMSELINCSRRAFFLYHN 236 (247)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~D~~~p~~~~~~~~~~~~~--~~~~~~i~~~gH~~~~e~p 236 (247)
+...+..... ...........++.+-++.+|+.|.++|...++.+. +..+ +.+++++|+++|. +.|++
T Consensus 180 ~~~~~~~~~~----~~~s~i~~~~~l~~PvLiIHG~~D~lVp~~~s~~l~-e~~~s~~kkl~~i~Ga~H~-l~~~~ 249 (307)
T PRK13604 180 VTDCFKHGWD----TLDSTINKMKGLDIPFIAFTANNDSWVKQSEVIDLL-DSIRSEQCKLYSLIGSSHD-LGENL 249 (307)
T ss_pred HHHHHhcCcc----ccccHHHHHhhcCCCEEEEEcCCCCccCHHHHHHHH-HHhccCCcEEEEeCCCccc-cCcch
Confidence 3332211111 111222223344567778899999999999999988 6554 7899999999998 44554
No 55
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.88 E-value=3.5e-21 Score=147.48 Aligned_cols=232 Identities=19% Similarity=0.158 Sum_probs=138.6
Q ss_pred CcEEEEEcCCCCChhhHHHHHHHHHhC--CcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCCcEEEEEEe
Q 025845 9 EKHFVLVHGVNHGAWCWYKLKARLVAG--GHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHS 86 (247)
Q Consensus 9 ~~~iv~lhG~~~~~~~~~~~~~~l~~~--g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~lvGhS 86 (247)
+|+++|+||++++...|......+... .|+++++|+||||.|. .. .+....+++++..+++++ +..+++++|||
T Consensus 21 ~~~i~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~g~s~-~~--~~~~~~~~~~~~~~~~~~-~~~~~~l~G~S 96 (282)
T COG0596 21 GPPLVLLHGFPGSSSVWRPVFKVLPALAARYRVIAPDLRGHGRSD-PA--GYSLSAYADDLAALLDAL-GLEKVVLVGHS 96 (282)
T ss_pred CCeEEEeCCCCCchhhhHHHHHHhhccccceEEEEecccCCCCCC-cc--cccHHHHHHHHHHHHHHh-CCCceEEEEec
Confidence 569999999999999998844444332 1899999999999997 11 245555699999999999 77889999999
Q ss_pred hhHHHHHHHHHhCCCccceEEEEeccCC-C---------CCCChHHHHHHHHHhhc-CCCCcccccc--cccccCC----
Q 025845 87 LGGVTLALAADKFPHKISVAVFVTAFMP-D---------TTHRPSFVLEQYSEKMG-KEDDSWLDTQ--FSQCDAS---- 149 (247)
Q Consensus 87 ~Gg~ia~~~a~~~p~~v~~lvl~~~~~~-~---------~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~---- 149 (247)
|||.+++.++.++|++++++|++++... . ................. .....+.... .......
T Consensus 97 ~Gg~~~~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (282)
T COG0596 97 MGGAVALALALRHPDRVRGLVLIGPAPPPGLLEAALRQPAGAAPLAALADLLLGLDAAAFAALLAALGLLAALAAAARAG 176 (282)
T ss_pred ccHHHHHHHHHhcchhhheeeEecCCCCcccccCccccCccccchhhhhhhhhccchhhhhhhhhcccccccccccchhc
Confidence 9999999999999999999999997643 0 00000001100000000 0000000000 0000000
Q ss_pred CCcccceeechhhHHHHHhcCCC----cchhhhh--hhhhcccchhHHhhhhhhccchhHHHHHHHHHHHhhcCC-ccee
Q 025845 150 NPSHISMLFGREFLTIKIYQLCP----PEVINLL--RITFIGRAIVLRQIVSYLYLDSDTMQIMLNFIIIIIITT-HMSE 222 (247)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~--~~~~~~~~~~~~~~l~~g~~D~~~p~~~~~~~~~~~~~~-~~~~ 222 (247)
.. .................... ....... ..........++..+..|++|.+.|......+. ...++ .++.
T Consensus 177 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~d~~~~~~~~~~~~-~~~~~~~~~~ 254 (282)
T COG0596 177 LA-EALRAPLLGAAAAAFARAARADLAAALLALLDRDLRAALARITVPTLIIHGEDDPVVPAELARRLA-AALPNDARLV 254 (282)
T ss_pred cc-cccccccchhHhhhhhhhcccccchhhhcccccccchhhccCCCCeEEEecCCCCcCCHHHHHHHH-hhCCCCceEE
Confidence 00 00000000011000000000 0000001 011223334455666669999777776655565 66775 9999
Q ss_pred eecCCCccccccChhhHHHHHHhh
Q 025845 223 LINCSRRAFFLYHNTLFIQFVYVL 246 (247)
Q Consensus 223 ~i~~~gH~~~~e~p~~~~~~v~~~ 246 (247)
+++++||++++++|+.|++.+..+
T Consensus 255 ~~~~~gH~~~~~~p~~~~~~i~~~ 278 (282)
T COG0596 255 VIPGAGHFPHLEAPEAFAAALLAF 278 (282)
T ss_pred EeCCCCCcchhhcHHHHHHHHHHH
Confidence 999999999999999999988753
No 56
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.87 E-value=2.3e-21 Score=159.74 Aligned_cols=228 Identities=14% Similarity=0.040 Sum_probs=140.2
Q ss_pred CCcEEEEEcCCCCChhhHH-----HHHHHHHhCCcEEEEecCCCCCCCCCccc-CccCHHHhHHHHHHHHHhCCCCCcEE
Q 025845 8 EEKHFVLVHGVNHGAWCWY-----KLKARLVAGGHRVTAVDLAASGINMKRIE-DVHTFHAYSEPLMEVLASLPAEEKVI 81 (247)
Q Consensus 8 ~~~~iv~lhG~~~~~~~~~-----~~~~~l~~~g~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~~l~~~i~~l~~~~~~~ 81 (247)
.++|||++||+......|+ .++..|.++||+|+++|++|+|.|..... ..|..+.+.+.+..+++.+ +.++++
T Consensus 187 ~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~~~ddY~~~~i~~al~~v~~~~-g~~kv~ 265 (532)
T TIGR01838 187 HKTPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADKTFDDYIRDGVIAALEVVEAIT-GEKQVN 265 (532)
T ss_pred CCCcEEEECcccccceeeecccchHHHHHHHHCCcEEEEEECCCCCcccccCChhhhHHHHHHHHHHHHHHhc-CCCCeE
Confidence 4689999999998888885 79999998999999999999998865431 1345555666777777777 889999
Q ss_pred EEEEehhHHHHH----HHHHhC-CCccceEEEEeccCCCCCCChHH---------HHHHHHHhhcCCCCccccccccc--
Q 025845 82 LVGHSLGGVTLA----LAADKF-PHKISVAVFVTAFMPDTTHRPSF---------VLEQYSEKMGKEDDSWLDTQFSQ-- 145 (247)
Q Consensus 82 lvGhS~Gg~ia~----~~a~~~-p~~v~~lvl~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~-- 145 (247)
++||||||.++. .++... |++|+++|++++.........-. .++.............+...+..
T Consensus 266 lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~~~G~l~~f~~~~~~~~~e~~~~~~G~lpg~~m~~~F~~lr 345 (532)
T TIGR01838 266 CVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFSDPGELGVFVDEEIVAGIERQNGGGGYLDGRQMAVTFSLLR 345 (532)
T ss_pred EEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCCCcchhhhhcCchhHHHHHHHHHhcCCCCHHHHHHHHHhcC
Confidence 999999999852 244554 78999999999865433221110 01111111000000011111111
Q ss_pred ------------ccCCCC-c------------ccceeechhhHHHHHhcCC-CcchhhhhhhhhcccchhHHhhhhhhcc
Q 025845 146 ------------CDASNP-S------------HISMLFGREFLTIKIYQLC-PPEVINLLRITFIGRAIVLRQIVSYLYL 199 (247)
Q Consensus 146 ------------~~~~~~-~------------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~g~~ 199 (247)
+..++. . ........+++++++..+. ................+.++..+..|++
T Consensus 346 p~~l~w~~~v~~yl~g~~~~~fdll~Wn~D~t~lP~~~~~~~lr~ly~~N~L~~G~~~v~g~~~dL~~I~vPvLvV~G~~ 425 (532)
T TIGR01838 346 ENDLIWNYYVDNYLKGKSPVPFDLLFWNSDSTNLPGKMHNFYLRNLYLQNALTTGGLEVCGVRLDLSKVKVPVYIIATRE 425 (532)
T ss_pred hhhHHHHHHHHHHhcCCCccchhHHHHhccCccchHHHHHHHHHHHHhcCCCcCCeeEECCEecchhhCCCCEEEEeeCC
Confidence 000100 0 0000001111112221111 1111111112233445556666666999
Q ss_pred chhHHHHHHHHHHHhhcCCcceeeecCCCccccccChh
Q 025845 200 DSDTMQIMLNFIIIIIITTHMSELINCSRRAFFLYHNT 237 (247)
Q Consensus 200 D~~~p~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~ 237 (247)
|.++|......+. ..+++.+..+++++||.+++++|.
T Consensus 426 D~IvP~~sa~~l~-~~i~~~~~~vL~~sGHi~~ienPp 462 (532)
T TIGR01838 426 DHIAPWQSAYRGA-ALLGGPKTFVLGESGHIAGVVNPP 462 (532)
T ss_pred CCcCCHHHHHHHH-HHCCCCEEEEECCCCCchHhhCCC
Confidence 9999999999888 889999999999999999999985
No 57
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.87 E-value=5.5e-21 Score=145.33 Aligned_cols=103 Identities=17% Similarity=0.171 Sum_probs=87.0
Q ss_pred CcEEEEEcCCCCC----hhhHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHH---HhCCCCCcEE
Q 025845 9 EKHFVLVHGVNHG----AWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVL---ASLPAEEKVI 81 (247)
Q Consensus 9 ~~~iv~lhG~~~~----~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i---~~l~~~~~~~ 81 (247)
.++|||+||++++ ...|..+++.|+++||+|+++|+||||.|+..... .+++.+++|+.+++ ++. +.++++
T Consensus 25 ~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~~-~~~~~~~~Dv~~ai~~L~~~-~~~~v~ 102 (266)
T TIGR03101 25 RGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFAA-ARWDVWKEDVAAAYRWLIEQ-GHPPVT 102 (266)
T ss_pred ceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCcccc-CCHHHHHHHHHHHHHHHHhc-CCCCEE
Confidence 5789999999864 34678889999988999999999999999765432 57888888877654 444 578999
Q ss_pred EEEEehhHHHHHHHHHhCCCccceEEEEeccC
Q 025845 82 LVGHSLGGVTLALAADKFPHKISVAVFVTAFM 113 (247)
Q Consensus 82 lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 113 (247)
|+||||||.+++.+|.++|++++++|++++..
T Consensus 103 LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~ 134 (266)
T TIGR03101 103 LWGLRLGALLALDAANPLAAKCNRLVLWQPVV 134 (266)
T ss_pred EEEECHHHHHHHHHHHhCccccceEEEecccc
Confidence 99999999999999999999999999998753
No 58
>PRK10566 esterase; Provisional
Probab=99.85 E-value=2e-20 Score=143.17 Aligned_cols=190 Identities=11% Similarity=0.053 Sum_probs=112.4
Q ss_pred CCCcEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCH-------HHhHHHHHHHHHhC---C-
Q 025845 7 MEEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTF-------HAYSEPLMEVLASL---P- 75 (247)
Q Consensus 7 ~~~~~iv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~-------~~~~~~l~~~i~~l---~- 75 (247)
...|+||++||++++...|..++..|.++||+|+++|+||||.+...... .++ ....+++.++++.+ .
T Consensus 25 ~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 103 (249)
T PRK10566 25 TPLPTVFFYHGFTSSKLVYSYFAVALAQAGFRVIMPDAPMHGARFSGDEA-RRLNHFWQILLQNMQEFPTLRAAIREEGW 103 (249)
T ss_pred CCCCEEEEeCCCCcccchHHHHHHHHHhCCCEEEEecCCcccccCCCccc-cchhhHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 34689999999999998999999999988999999999999986432111 111 11233333333332 1
Q ss_pred -CCCcEEEEEEehhHHHHHHHHHhCCCccceEEEEeccCCCCCCChHHHHHHHHHhhcCCCCcccccccccccCCCCccc
Q 025845 76 -AEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHI 154 (247)
Q Consensus 76 -~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (247)
+.+++.++|||+||.+++.++.++|+....+++.++. ....+.... ... ...
T Consensus 104 ~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~---~~~----~~~---------- 156 (249)
T PRK10566 104 LLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMGSG----------YFTSLARTL---FPP----LIP---------- 156 (249)
T ss_pred cCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeCcH----------HHHHHHHHh---ccc----ccc----------
Confidence 4579999999999999999999888644444444432 111111110 000 000
Q ss_pred ceeechhhHHHHHhcCCCcchhhhhhhhhcccch-hHHhhhhhhccchhHHHHHHHHHHHhhcCC------cceeeecCC
Q 025845 155 SMLFGREFLTIKIYQLCPPEVINLLRITFIGRAI-VLRQIVSYLYLDSDTMQIMLNFIIIIIITT------HMSELINCS 227 (247)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~g~~D~~~p~~~~~~~~~~~~~~------~~~~~i~~~ 227 (247)
............+...... ... ...... +.+.++.+|++|.++|....+.+. +.++. .++..++++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~---~~~---~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~-~~l~~~g~~~~~~~~~~~~~ 229 (249)
T PRK10566 157 ETAAQQAEFNNIVAPLAEW---EVT---HQLEQLADRPLLLWHGLADDVVPAAESLRLQ-QALRERGLDKNLTCLWEPGV 229 (249)
T ss_pred cccccHHHHHHHHHHHhhc---Chh---hhhhhcCCCCEEEEEcCCCCcCCHHHHHHHH-HHHHhcCCCcceEEEecCCC
Confidence 0000001111111000000 000 011111 345667789999999999988887 65532 467789999
Q ss_pred Cccc
Q 025845 228 RRAF 231 (247)
Q Consensus 228 gH~~ 231 (247)
||..
T Consensus 230 ~H~~ 233 (249)
T PRK10566 230 RHRI 233 (249)
T ss_pred CCcc
Confidence 9985
No 59
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.85 E-value=2.3e-20 Score=137.21 Aligned_cols=105 Identities=26% Similarity=0.348 Sum_probs=90.7
Q ss_pred CCCcEEEEEcCCCCChhhHHHHHHHHHh-CCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCC--CCCcEEEE
Q 025845 7 MEEKHFVLVHGVNHGAWCWYKLKARLVA-GGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLP--AEEKVILV 83 (247)
Q Consensus 7 ~~~~~iv~lhG~~~~~~~~~~~~~~l~~-~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~--~~~~~~lv 83 (247)
..+|.++++||.+.+.-.|..++.++.. ...+|+++|+||||.|.-......+.+.+++|+.++++.+. ...+++||
T Consensus 72 t~gpil~l~HG~G~S~LSfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e~dlS~eT~~KD~~~~i~~~fge~~~~iilV 151 (343)
T KOG2564|consen 72 TEGPILLLLHGGGSSALSFAIFASELKSKIRCRCLALDLRGHGETKVENEDDLSLETMSKDFGAVIKELFGELPPQIILV 151 (343)
T ss_pred CCccEEEEeecCcccchhHHHHHHHHHhhcceeEEEeeccccCccccCChhhcCHHHHHHHHHHHHHHHhccCCCceEEE
Confidence 4789999999999999999999998865 34688999999999998776666899999999999999983 45789999
Q ss_pred EEehhHHHHHHHHHh--CCCccceEEEEecc
Q 025845 84 GHSLGGVTLALAADK--FPHKISVAVFVTAF 112 (247)
Q Consensus 84 GhS~Gg~ia~~~a~~--~p~~v~~lvl~~~~ 112 (247)
||||||.||.+.|.. -|. +.+++.++-.
T Consensus 152 GHSmGGaIav~~a~~k~lps-l~Gl~viDVV 181 (343)
T KOG2564|consen 152 GHSMGGAIAVHTAASKTLPS-LAGLVVIDVV 181 (343)
T ss_pred eccccchhhhhhhhhhhchh-hhceEEEEEe
Confidence 999999999888763 465 8999988863
No 60
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.84 E-value=7.3e-20 Score=129.56 Aligned_cols=216 Identities=16% Similarity=0.157 Sum_probs=142.0
Q ss_pred CCCcEEEEEcCCCCChh--hHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCCcE--EE
Q 025845 7 MEEKHFVLVHGVNHGAW--CWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKV--IL 82 (247)
Q Consensus 7 ~~~~~iv~lhG~~~~~~--~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~--~l 82 (247)
++...+|++||+-++.. ....++..|.+.|+.+..+|++|.|.|+..-.. -.....|+|+..+++.+.+..++ ++
T Consensus 31 gs~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~-Gn~~~eadDL~sV~q~~s~~nr~v~vi 109 (269)
T KOG4667|consen 31 GSTEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFYY-GNYNTEADDLHSVIQYFSNSNRVVPVI 109 (269)
T ss_pred CCceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCcccc-CcccchHHHHHHHHHHhccCceEEEEE
Confidence 45679999999988655 478899999999999999999999999876543 35555669999999999544443 58
Q ss_pred EEEehhHHHHHHHHHhCCCccceEEEEeccCCCCCCChHHHHHHHHHhhcCCCCcccccccccccCCCCcccceeechhh
Q 025845 83 VGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREF 162 (247)
Q Consensus 83 vGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (247)
+|||-||.+++.+|.++++ ++-+|.+++.............+.+...+ ....|+...-. .++. ...+.++.
T Consensus 110 ~gHSkGg~Vvl~ya~K~~d-~~~viNcsGRydl~~~I~eRlg~~~l~~i--ke~Gfid~~~r---kG~y---~~rvt~eS 180 (269)
T KOG4667|consen 110 LGHSKGGDVVLLYASKYHD-IRNVINCSGRYDLKNGINERLGEDYLERI--KEQGFIDVGPR---KGKY---GYRVTEES 180 (269)
T ss_pred EeecCccHHHHHHHHhhcC-chheEEcccccchhcchhhhhcccHHHHH--HhCCceecCcc---cCCc---CceecHHH
Confidence 8999999999999999987 77777666543322211111112222221 11222211111 1111 44455555
Q ss_pred HHHHHhcCCCcchhhhhhhhhcccchhHHhhhhhhccchhHHHHHHHHHHHhhcCCcceeeecCCCccccccChhhHHHH
Q 025845 163 LTIKIYQLCPPEVINLLRITFIGRAIVLRQIVSYLYLDSDTMQIMLNFIIIIIITTHMSELINCSRRAFFLYHNTLFIQF 242 (247)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~D~~~p~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~ 242 (247)
+.+.+......+... -+..++.+-.+|..|.++|.+.+.+++ +.+|+.++.+||++.|.... +.++.+..
T Consensus 181 lmdrLntd~h~aclk--------Id~~C~VLTvhGs~D~IVPve~AkefA-k~i~nH~L~iIEgADHnyt~-~q~~l~~l 250 (269)
T KOG4667|consen 181 LMDRLNTDIHEACLK--------IDKQCRVLTVHGSEDEIVPVEDAKEFA-KIIPNHKLEIIEGADHNYTG-HQSQLVSL 250 (269)
T ss_pred HHHHHhchhhhhhcC--------cCccCceEEEeccCCceeechhHHHHH-HhccCCceEEecCCCcCccc-hhhhHhhh
Confidence 554443333221111 122344444569999999999999999 99999999999999998543 33344433
No 61
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.83 E-value=9.4e-20 Score=145.93 Aligned_cols=101 Identities=17% Similarity=0.206 Sum_probs=81.5
Q ss_pred CcEEEEEcCCCCChhhH-----HHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHH-HH----HHHHhCCCCC
Q 025845 9 EKHFVLVHGVNHGAWCW-----YKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEP-LM----EVLASLPAEE 78 (247)
Q Consensus 9 ~~~iv~lhG~~~~~~~~-----~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~-l~----~~i~~l~~~~ 78 (247)
++|||++||+..+...| ..+++.|.++||+|+++|++|+|.|+.. .++++++.+ +. .+.+.. +.+
T Consensus 62 ~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~~----~~~~d~~~~~~~~~v~~l~~~~-~~~ 136 (350)
T TIGR01836 62 KTPLLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADRY----LTLDDYINGYIDKCVDYICRTS-KLD 136 (350)
T ss_pred CCcEEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHhc----CCHHHHHHHHHHHHHHHHHHHh-CCC
Confidence 56899999987655554 6899999989999999999999987533 466666533 33 444445 678
Q ss_pred cEEEEEEehhHHHHHHHHHhCCCccceEEEEeccCC
Q 025845 79 KVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMP 114 (247)
Q Consensus 79 ~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 114 (247)
+++++||||||.+++.++..+|++|+++|+++++..
T Consensus 137 ~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~ 172 (350)
T TIGR01836 137 QISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVD 172 (350)
T ss_pred cccEEEECHHHHHHHHHHHhCchheeeEEEeccccc
Confidence 999999999999999999999999999999998654
No 62
>PLN02872 triacylglycerol lipase
Probab=99.82 E-value=1e-19 Score=146.12 Aligned_cols=106 Identities=18% Similarity=0.278 Sum_probs=82.8
Q ss_pred CCCcEEEEEcCCCCChhhHH------HHHHHHHhCCcEEEEecCCCCCCCCC-----c-ccC--ccCHHHhH-HHHHHHH
Q 025845 7 MEEKHFVLVHGVNHGAWCWY------KLKARLVAGGHRVTAVDLAASGINMK-----R-IED--VHTFHAYS-EPLMEVL 71 (247)
Q Consensus 7 ~~~~~iv~lhG~~~~~~~~~------~~~~~l~~~g~~vi~~D~~G~G~S~~-----~-~~~--~~~~~~~~-~~l~~~i 71 (247)
.++|+|+|+||++++...|. .++..|+++||+|+++|+||++.|.+ + ... .+++++++ .|+.+++
T Consensus 72 ~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~i 151 (395)
T PLN02872 72 QRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRGTRWSYGHVTLSEKDKEFWDWSWQELALYDLAEMI 151 (395)
T ss_pred CCCCeEEEeCcccccccceeecCcccchHHHHHhCCCCcccccccccccccCCCCCCccchhccCCcHHHHHHHHHHHHH
Confidence 34789999999999988883 45557888899999999999886632 1 111 36888888 7999999
Q ss_pred HhCC--CCCcEEEEEEehhHHHHHHHHHhCCC---ccceEEEEeccC
Q 025845 72 ASLP--AEEKVILVGHSLGGVTLALAADKFPH---KISVAVFVTAFM 113 (247)
Q Consensus 72 ~~l~--~~~~~~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~~ 113 (247)
+++. ..+++++|||||||.+++.++ .+|+ +|+++++++|..
T Consensus 152 d~i~~~~~~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~P~~ 197 (395)
T PLN02872 152 HYVYSITNSKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALLCPIS 197 (395)
T ss_pred HHHHhccCCceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHhcchh
Confidence 9861 247999999999999998555 5676 688888888853
No 63
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.82 E-value=1.8e-19 Score=126.38 Aligned_cols=144 Identities=17% Similarity=0.176 Sum_probs=109.1
Q ss_pred EEEEEcCCCCChhhHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCCcEEEEEEehhHH
Q 025845 11 HFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGV 90 (247)
Q Consensus 11 ~iv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~lvGhS~Gg~ 90 (247)
+|||+||++++...|..+++.|+++||.|+.+|+||+|.+... ....++.+++. -... +.+++.|+|||+||.
T Consensus 1 ~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~----~~~~~~~~~~~--~~~~-~~~~i~l~G~S~Gg~ 73 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQPLAEALAEQGYAVVAFDYPGHGDSDGA----DAVERVLADIR--AGYP-DPDRIILIGHSMGGA 73 (145)
T ss_dssp EEEEECTTTTTTHHHHHHHHHHHHTTEEEEEESCTTSTTSHHS----HHHHHHHHHHH--HHHC-TCCEEEEEEETHHHH
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEecCCCCccchh----HHHHHHHHHHH--hhcC-CCCcEEEEEEccCcH
Confidence 6999999999999999999999999999999999999988322 13333333332 1123 678999999999999
Q ss_pred HHHHHHHhCCCccceEEEEeccCCCCCCChHHHHHHHHHhhcCCCCcccccccccccCCCCcccceeechhhHHHHHhcC
Q 025845 91 TLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFLTIKIYQL 170 (247)
Q Consensus 91 ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (247)
+++.++.+. .+++++|++++. + ....+.. .. .
T Consensus 74 ~a~~~~~~~-~~v~~~v~~~~~-~--------~~~~~~~--------------------~~---~--------------- 105 (145)
T PF12695_consen 74 IAANLAARN-PRVKAVVLLSPY-P--------DSEDLAK--------------------IR---I--------------- 105 (145)
T ss_dssp HHHHHHHHS-TTESEEEEESES-S--------GCHHHTT--------------------TT---S---------------
T ss_pred HHHHHhhhc-cceeEEEEecCc-c--------chhhhhc--------------------cC---C---------------
Confidence 999999988 789999999983 0 0001100 00 1
Q ss_pred CCcchhhhhhhhhcccchhHHhhhhhhccchhHHHHHHHHHHHhhcC-CcceeeecCCCcc
Q 025845 171 CPPEVINLLRITFIGRAIVLRQIVSYLYLDSDTMQIMLNFIIIIIIT-THMSELINCSRRA 230 (247)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~l~~g~~D~~~p~~~~~~~~~~~~~-~~~~~~i~~~gH~ 230 (247)
+..+..|++|.++|.+..+.+. +.++ ..++.++++++|+
T Consensus 106 --------------------pv~~i~g~~D~~~~~~~~~~~~-~~~~~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 106 --------------------PVLFIHGENDPLVPPEQVRRLY-EALPGPKELYIIPGAGHF 145 (145)
T ss_dssp --------------------EEEEEEETT-SSSHHHHHHHHH-HHHCSSEEEEEETTS-TT
T ss_pred --------------------cEEEEEECCCCcCCHHHHHHHH-HHcCCCcEEEEeCCCcCc
Confidence 5567779999999999999887 6655 6899999999995
No 64
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.80 E-value=1.2e-18 Score=139.96 Aligned_cols=111 Identities=20% Similarity=0.222 Sum_probs=87.5
Q ss_pred CCCCcEEEEEcCCCCCh--hhHHH-HHHHHHh--CCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCC-----
Q 025845 6 GMEEKHFVLVHGVNHGA--WCWYK-LKARLVA--GGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLP----- 75 (247)
Q Consensus 6 ~~~~~~iv~lhG~~~~~--~~~~~-~~~~l~~--~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~----- 75 (247)
++++|++|++||++++. ..|.+ +++.|.. .+|+||++|++|+|.|..+... ......++++.++++.|.
T Consensus 38 n~~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~-~~t~~vg~~la~lI~~L~~~~gl 116 (442)
T TIGR03230 38 NHETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTSA-AYTKLVGKDVAKFVNWMQEEFNY 116 (442)
T ss_pred CCCCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCcccc-ccHHHHHHHHHHHHHHHHHhhCC
Confidence 35789999999998754 45765 5665542 2599999999999988765432 344667777777777541
Q ss_pred CCCcEEEEEEehhHHHHHHHHHhCCCccceEEEEeccCCCCC
Q 025845 76 AEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTT 117 (247)
Q Consensus 76 ~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~ 117 (247)
+.++++||||||||.+|..++.++|++|.++++++|..|...
T Consensus 117 ~l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAgP~F~ 158 (442)
T TIGR03230 117 PWDNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAGPTFE 158 (442)
T ss_pred CCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCCCccc
Confidence 468999999999999999999999999999999999866544
No 65
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.79 E-value=1.6e-18 Score=155.26 Aligned_cols=103 Identities=21% Similarity=0.154 Sum_probs=82.5
Q ss_pred CCCcEEEEEcCCCCChhhHHHH-----HHHHHhCCcEEEEecCCCCCCCCCcccC-ccCHHHhHHHHHHHHHh---CCCC
Q 025845 7 MEEKHFVLVHGVNHGAWCWYKL-----KARLVAGGHRVTAVDLAASGINMKRIED-VHTFHAYSEPLMEVLAS---LPAE 77 (247)
Q Consensus 7 ~~~~~iv~lhG~~~~~~~~~~~-----~~~l~~~g~~vi~~D~~G~G~S~~~~~~-~~~~~~~~~~l~~~i~~---l~~~ 77 (247)
..++||||+||++.+...|+.. ++.|.++||+|+++|+ |.|+.+... ..++.+++..+.+.++. + ..
T Consensus 65 ~~~~plllvhg~~~~~~~~d~~~~~s~v~~L~~~g~~v~~~d~---G~~~~~~~~~~~~l~~~i~~l~~~l~~v~~~-~~ 140 (994)
T PRK07868 65 PVGPPVLMVHPMMMSADMWDVTRDDGAVGILHRAGLDPWVIDF---GSPDKVEGGMERNLADHVVALSEAIDTVKDV-TG 140 (994)
T ss_pred CCCCcEEEECCCCCCccceecCCcccHHHHHHHCCCEEEEEcC---CCCChhHcCccCCHHHHHHHHHHHHHHHHHh-hC
Confidence 4679999999999999999865 7889888999999994 666654321 25777777777766654 3 34
Q ss_pred CcEEEEEEehhHHHHHHHHHhC-CCccceEEEEeccC
Q 025845 78 EKVILVGHSLGGVTLALAADKF-PHKISVAVFVTAFM 113 (247)
Q Consensus 78 ~~~~lvGhS~Gg~ia~~~a~~~-p~~v~~lvl~~~~~ 113 (247)
++++|+||||||.+++.++..+ |++|+++|+++++.
T Consensus 141 ~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~ 177 (994)
T PRK07868 141 RDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPV 177 (994)
T ss_pred CceEEEEEChhHHHHHHHHHhcCCCccceEEEEeccc
Confidence 6899999999999999988755 56899999988864
No 66
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.78 E-value=2.2e-17 Score=122.63 Aligned_cols=108 Identities=18% Similarity=0.161 Sum_probs=97.7
Q ss_pred cEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCCcEEEEEEehhH
Q 025845 10 KHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGG 89 (247)
Q Consensus 10 ~~iv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~lvGhS~Gg 89 (247)
.+||-+||.+|+..+|+-+.+.|.+.|.|+|.+++||+|.+++++...++..+-+.-+.++++.+.-.++++++|||.|+
T Consensus 36 gTVv~~hGsPGSH~DFkYi~~~l~~~~iR~I~iN~PGf~~t~~~~~~~~~n~er~~~~~~ll~~l~i~~~~i~~gHSrGc 115 (297)
T PF06342_consen 36 GTVVAFHGSPGSHNDFKYIRPPLDEAGIRFIGINYPGFGFTPGYPDQQYTNEERQNFVNALLDELGIKGKLIFLGHSRGC 115 (297)
T ss_pred eeEEEecCCCCCccchhhhhhHHHHcCeEEEEeCCCCCCCCCCCcccccChHHHHHHHHHHHHHcCCCCceEEEEeccch
Confidence 48999999999999999999999999999999999999999998877899999999999999999545789999999999
Q ss_pred HHHHHHHHhCCCccceEEEEeccCCCCCCC
Q 025845 90 VTLALAADKFPHKISVAVFVTAFMPDTTHR 119 (247)
Q Consensus 90 ~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~ 119 (247)
-.|+.+|..+| +.++++++|..-.+-..
T Consensus 116 enal~la~~~~--~~g~~lin~~G~r~Hkg 143 (297)
T PF06342_consen 116 ENALQLAVTHP--LHGLVLINPPGLRPHKG 143 (297)
T ss_pred HHHHHHHhcCc--cceEEEecCCccccccC
Confidence 99999999986 77999999975544433
No 67
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.74 E-value=2.1e-17 Score=127.35 Aligned_cols=111 Identities=21% Similarity=0.248 Sum_probs=83.5
Q ss_pred CCCCcEEEEEcCCCCCh-hhHHH-HHHHHH-hCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhC-----CCC
Q 025845 6 GMEEKHFVLVHGVNHGA-WCWYK-LKARLV-AGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASL-----PAE 77 (247)
Q Consensus 6 ~~~~~~iv~lhG~~~~~-~~~~~-~~~~l~-~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l-----~~~ 77 (247)
++++|++|++||++++. ..|.. +...+. ..+|+|+++|+++++.+..+. ...+....++++.++++.+ .+.
T Consensus 33 ~~~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~~-a~~~~~~v~~~la~~l~~L~~~~g~~~ 111 (275)
T cd00707 33 NPSRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYPQ-AVNNTRVVGAELAKFLDFLVDNTGLSL 111 (275)
T ss_pred CCCCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChHH-HHHhHHHHHHHHHHHHHHHHHhcCCCh
Confidence 45689999999999887 56754 444443 357999999999984332222 1235555666666666654 145
Q ss_pred CcEEEEEEehhHHHHHHHHHhCCCccceEEEEeccCCCCC
Q 025845 78 EKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTT 117 (247)
Q Consensus 78 ~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~ 117 (247)
++++||||||||.+|..++.++|++|+++|+++|..|...
T Consensus 112 ~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p~f~ 151 (275)
T cd00707 112 ENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGPLFS 151 (275)
T ss_pred HHEEEEEecHHHHHHHHHHHHhcCccceeEEecCCccccc
Confidence 7999999999999999999999999999999999766544
No 68
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.73 E-value=5.7e-16 Score=119.99 Aligned_cols=107 Identities=17% Similarity=0.166 Sum_probs=78.7
Q ss_pred CCCcEEEEEcCCCCChhhHHHH--HHHHH-hCCcEEEEecC--CCCCCCCCc-------------------ccCccCHHH
Q 025845 7 MEEKHFVLVHGVNHGAWCWYKL--KARLV-AGGHRVTAVDL--AASGINMKR-------------------IEDVHTFHA 62 (247)
Q Consensus 7 ~~~~~iv~lhG~~~~~~~~~~~--~~~l~-~~g~~vi~~D~--~G~G~S~~~-------------------~~~~~~~~~ 62 (247)
.+.|+|+|+||++++...|... ...++ +.|+.|+++|. +|+|.+... ....++..+
T Consensus 40 ~~~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~ 119 (275)
T TIGR02821 40 GPVPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGAGFYVDATEEPWSQHYRMYS 119 (275)
T ss_pred CCCCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCccccccCCcCcccccchHHH
Confidence 3468999999999999888532 34454 46899999998 555533211 001123333
Q ss_pred -hHHHHHHHHHhC--CCCCcEEEEEEehhHHHHHHHHHhCCCccceEEEEeccC
Q 025845 63 -YSEPLMEVLASL--PAEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFM 113 (247)
Q Consensus 63 -~~~~l~~~i~~l--~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 113 (247)
.++++..+++.. -+.+++.++||||||.+|+.++.++|+.+++++++++..
T Consensus 120 ~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~ 173 (275)
T TIGR02821 120 YIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPIV 173 (275)
T ss_pred HHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCcc
Confidence 467888888772 155789999999999999999999999999999988863
No 69
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.72 E-value=4e-16 Score=113.77 Aligned_cols=221 Identities=13% Similarity=0.059 Sum_probs=143.7
Q ss_pred CCCCcEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHH-hCCCCCcEEEEE
Q 025845 6 GMEEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLA-SLPAEEKVILVG 84 (247)
Q Consensus 6 ~~~~~~iv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~-~l~~~~~~~lvG 84 (247)
.+.++.++++|=.||++..|+.+...|.. ...++++++||+|.--..+. ..+++.+++.+...|. -+ ..+++.++|
T Consensus 4 ~~~~~~L~cfP~AGGsa~~fr~W~~~lp~-~iel~avqlPGR~~r~~ep~-~~di~~Lad~la~el~~~~-~d~P~alfG 80 (244)
T COG3208 4 PGARLRLFCFPHAGGSASLFRSWSRRLPA-DIELLAVQLPGRGDRFGEPL-LTDIESLADELANELLPPL-LDAPFALFG 80 (244)
T ss_pred CCCCceEEEecCCCCCHHHHHHHHhhCCc-hhheeeecCCCcccccCCcc-cccHHHHHHHHHHHhcccc-CCCCeeecc
Confidence 35677899999999999999999998884 69999999999998755443 3699999999999998 45 678999999
Q ss_pred EehhHHHHHHHHHhCCC---ccceEEEEeccCCCCCCChHHHHHHHHHhhcCCCCcccccccccccCCCCcccceeechh
Q 025845 85 HSLGGVTLALAADKFPH---KISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGRE 161 (247)
Q Consensus 85 hS~Gg~ia~~~a~~~p~---~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (247)
|||||++|.+.|.+... ....+.+.++..|...... .+... ...++++....... .+ ...+...
T Consensus 81 HSmGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~~-----~i~~~---~D~~~l~~l~~lgG--~p---~e~led~ 147 (244)
T COG3208 81 HSMGAMLAFEVARRLERAGLPPRALFISGCRAPHYDRGK-----QIHHL---DDADFLADLVDLGG--TP---PELLEDP 147 (244)
T ss_pred cchhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCcccC-----CccCC---CHHHHHHHHHHhCC--CC---hHHhcCH
Confidence 99999999999986522 2666776666545221110 00000 11222222222111 11 1222222
Q ss_pred hHHHHHhcCCCcchhhhhhhhhc--ccchhHHhhhhhhccchhHHHHHHHHHHHhhcC-CcceeeecCCCccccccChhh
Q 025845 162 FLTIKIYQLCPPEVINLLRITFI--GRAIVLRQIVSYLYLDSDTMQIMLNFIIIIIIT-THMSELINCSRRAFFLYHNTL 238 (247)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~g~~D~~~p~~~~~~~~~~~~~-~~~~~~i~~~gH~~~~e~p~~ 238 (247)
.+..++......+.... ..... ....+++.....|++|..+..+....+. +... ..++.+++| ||+...++.++
T Consensus 148 El~~l~LPilRAD~~~~-e~Y~~~~~~pl~~pi~~~~G~~D~~vs~~~~~~W~-~~t~~~f~l~~fdG-gHFfl~~~~~~ 224 (244)
T COG3208 148 ELMALFLPILRADFRAL-ESYRYPPPAPLACPIHAFGGEKDHEVSRDELGAWR-EHTKGDFTLRVFDG-GHFFLNQQREE 224 (244)
T ss_pred HHHHHHHHHHHHHHHHh-cccccCCCCCcCcceEEeccCcchhccHHHHHHHH-HhhcCCceEEEecC-cceehhhhHHH
Confidence 33333333222222111 11111 1233444445559999999999988887 6555 677888866 89999999999
Q ss_pred HHHHHHh
Q 025845 239 FIQFVYV 245 (247)
Q Consensus 239 ~~~~v~~ 245 (247)
+.+.|..
T Consensus 225 v~~~i~~ 231 (244)
T COG3208 225 VLARLEQ 231 (244)
T ss_pred HHHHHHH
Confidence 9887764
No 70
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.69 E-value=2e-16 Score=120.04 Aligned_cols=222 Identities=14% Similarity=0.029 Sum_probs=131.0
Q ss_pred CCCCcEEEEEcCCCCChhh--HHHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhC---CCCCcE
Q 025845 6 GMEEKHFVLVHGVNHGAWC--WYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASL---PAEEKV 80 (247)
Q Consensus 6 ~~~~~~iv~lhG~~~~~~~--~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l---~~~~~~ 80 (247)
+..+|.||++||+.|+.+. -+-+...+.++||.|+++|+|||+.+....+-.| -.-+.+|+..+++.+ ....++
T Consensus 72 ~~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p~~y-h~G~t~D~~~~l~~l~~~~~~r~~ 150 (345)
T COG0429 72 AAKKPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTSPRLY-HSGETEDIRFFLDWLKARFPPRPL 150 (345)
T ss_pred ccCCceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccCccee-cccchhHHHHHHHHHHHhCCCCce
Confidence 4567899999999776543 5678888988999999999999999976443211 111124444433333 367899
Q ss_pred EEEEEehhH-HHHHHHHHhCCC-ccceEEEEeccCCC------CCCChH-HHHHH-HHHhhcCCCCcccccccccccCCC
Q 025845 81 ILVGHSLGG-VTLALAADKFPH-KISVAVFVTAFMPD------TTHRPS-FVLEQ-YSEKMGKEDDSWLDTQFSQCDASN 150 (247)
Q Consensus 81 ~lvGhS~Gg-~ia~~~a~~~p~-~v~~lvl~~~~~~~------~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 150 (247)
..+|.|+|| +++..++.+-.+ .+.+.+.++.+... ...... .+.+. +.+.+ ...+......+.+..
T Consensus 151 ~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl~~~~~~l~~~~s~~ly~r~l~~~L----~~~~~~kl~~l~~~~ 226 (345)
T COG0429 151 YAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDLEACAYRLDSGFSLRLYSRYLLRNL----KRNAARKLKELEPSL 226 (345)
T ss_pred EEEEecccHHHHHHHHHhhccCcccceeeeeeCHHHHHHHHHHhcCchhhhhhHHHHHHHH----HHHHHHHHHhcCccc
Confidence 999999999 666666654322 45666666553221 111111 11111 11111 111111011111111
Q ss_pred Cccc----------ceeechhhHHHHHhcCCCcchhhhhhhhhcccchhHHhhhhhhccchhHHHHHHHHHHHh-hcCCc
Q 025845 151 PSHI----------SMLFGREFLTIKIYQLCPPEVINLLRITFIGRAIVLRQIVSYLYLDSDTMQIMLNFIIII-IITTH 219 (247)
Q Consensus 151 ~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~D~~~p~~~~~~~~~~-~~~~~ 219 (247)
+ .. ...++.......+.-....+.+..++.+.....+..+.++.+..+|++++.....+.. . ..|++
T Consensus 227 p-~~~~~~ik~~~ti~eFD~~~Tap~~Gf~da~dYYr~aSs~~~L~~Ir~PtLii~A~DDP~~~~~~iP~~~-~~~np~v 304 (345)
T COG0429 227 P-GTVLAAIKRCRTIREFDDLLTAPLHGFADAEDYYRQASSLPLLPKIRKPTLIINAKDDPFMPPEVIPKLQ-EMLNPNV 304 (345)
T ss_pred C-cHHHHHHHhhchHHhccceeeecccCCCcHHHHHHhccccccccccccceEEEecCCCCCCChhhCCcch-hcCCCce
Confidence 1 00 1111111111111111223334556666778888889999999999999998888776 4 78999
Q ss_pred ceeeecCCCcccccc
Q 025845 220 MSELINCSRRAFFLY 234 (247)
Q Consensus 220 ~~~~i~~~gH~~~~e 234 (247)
.+.+-+.+||.-|+.
T Consensus 305 ~l~~t~~GGHvGfl~ 319 (345)
T COG0429 305 LLQLTEHGGHVGFLG 319 (345)
T ss_pred EEEeecCCceEEecc
Confidence 999999999999998
No 71
>PRK11460 putative hydrolase; Provisional
Probab=99.68 E-value=1.4e-15 Score=114.63 Aligned_cols=172 Identities=9% Similarity=-0.011 Sum_probs=109.9
Q ss_pred CCCCCcEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEecCCCCCCCCCcc----------cCcc---CHHHhHHHHHHHH
Q 025845 5 VGMEEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRI----------EDVH---TFHAYSEPLMEVL 71 (247)
Q Consensus 5 ~~~~~~~iv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~----------~~~~---~~~~~~~~l~~~i 71 (247)
.++..|.|||+||++++...|.++++.|.+.++.+..++.+|...+.... .... ++.+..+.+.+.+
T Consensus 12 ~~~~~~~vIlLHG~G~~~~~~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~i 91 (232)
T PRK11460 12 DKPAQQLLLLFHGVGDNPVAMGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIETV 91 (232)
T ss_pred CCCCCcEEEEEeCCCCChHHHHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHHH
Confidence 34567899999999999999999999998665555566666643221100 0001 1223333333333
Q ss_pred H----hCC-CCCcEEEEEEehhHHHHHHHHHhCCCccceEEEEeccCCCCCCChHHHHHHHHHhhcCCCCcccccccccc
Q 025845 72 A----SLP-AEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQC 146 (247)
Q Consensus 72 ~----~l~-~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (247)
+ .+. ..++++|+|||+||.+++.++.++|+.+.++|..++..+ ..
T Consensus 92 ~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~---------------~~--------------- 141 (232)
T PRK11460 92 RYWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYA---------------SL--------------- 141 (232)
T ss_pred HHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEeccccc---------------cc---------------
Confidence 3 331 236899999999999999999999988787776654210 00
Q ss_pred cCCCCcccceeechhhHHHHHhcCCCcchhhhhhhhhcccchhHHhhhhhhccchhHHHHHHHHHHHhhc----CCccee
Q 025845 147 DASNPSHISMLFGREFLTIKIYQLCPPEVINLLRITFIGRAIVLRQIVSYLYLDSDTMQIMLNFIIIIII----TTHMSE 222 (247)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~D~~~p~~~~~~~~~~~~----~~~~~~ 222 (247)
+ .. .....+..+.+|++|.++|.+..+.+. +.+ .++++.
T Consensus 142 ------~-~~-----------------------------~~~~~pvli~hG~~D~vvp~~~~~~~~-~~L~~~g~~~~~~ 184 (232)
T PRK11460 142 ------P-ET-----------------------------APTATTIHLIHGGEDPVIDVAHAVAAQ-EALISLGGDVTLD 184 (232)
T ss_pred ------c-cc-----------------------------ccCCCcEEEEecCCCCccCHHHHHHHH-HHHHHCCCCeEEE
Confidence 0 00 000123356779999999999988776 544 346788
Q ss_pred eecCCCccccccChhhHHHHH
Q 025845 223 LINCSRRAFFLYHNTLFIQFV 243 (247)
Q Consensus 223 ~i~~~gH~~~~e~p~~~~~~v 243 (247)
+++++||...-+.-+...+.+
T Consensus 185 ~~~~~gH~i~~~~~~~~~~~l 205 (232)
T PRK11460 185 IVEDLGHAIDPRLMQFALDRL 205 (232)
T ss_pred EECCCCCCCCHHHHHHHHHHH
Confidence 899999997654444444333
No 72
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.66 E-value=2e-15 Score=110.88 Aligned_cols=183 Identities=14% Similarity=0.078 Sum_probs=127.8
Q ss_pred CcEEEEEcCCCCChhhHHHHHHHHHh-CCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCC-CCCcEEEEEEe
Q 025845 9 EKHFVLVHGVNHGAWCWYKLKARLVA-GGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLP-AEEKVILVGHS 86 (247)
Q Consensus 9 ~~~iv~lhG~~~~~~~~~~~~~~l~~-~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~-~~~~~~lvGhS 86 (247)
.+++++.||...+......+...|.. -+++|+.+|++|+|.|.+.+.+. ...+.++.+.+.+..-. +.++++|+|+|
T Consensus 60 ~~~lly~hGNa~Dlgq~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE~-n~y~Di~avye~Lr~~~g~~~~Iil~G~S 138 (258)
T KOG1552|consen 60 HPTLLYSHGNAADLGQMVELFKELSIFLNCNVVSYDYSGYGRSSGKPSER-NLYADIKAVYEWLRNRYGSPERIILYGQS 138 (258)
T ss_pred ceEEEEcCCcccchHHHHHHHHHHhhcccceEEEEecccccccCCCcccc-cchhhHHHHHHHHHhhcCCCceEEEEEec
Confidence 58999999997777765555555553 36999999999999999887653 55555555555555553 47999999999
Q ss_pred hhHHHHHHHHHhCCCccceEEEEeccCCCCCCChHHHHHHHHHhhcCCCCcccccccccccCCCCcccceeechhhHHHH
Q 025845 87 LGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFLTIK 166 (247)
Q Consensus 87 ~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (247)
+|...++.+|.+.| +.++||.+|.... .+.+.. .......+. .
T Consensus 139 iGt~~tv~Lasr~~--~~alVL~SPf~S~--------~rv~~~------~~~~~~~~d---------------------~ 181 (258)
T KOG1552|consen 139 IGTVPTVDLASRYP--LAAVVLHSPFTSG--------MRVAFP------DTKTTYCFD---------------------A 181 (258)
T ss_pred CCchhhhhHhhcCC--cceEEEeccchhh--------hhhhcc------CcceEEeec---------------------c
Confidence 99999999999998 9999999986321 111110 000000000 0
Q ss_pred HhcCCCcchhhhhhhhhcccchhHHhhhhhhccchhHHHHHHHHHHHhhcCCc-ceeeecCCCccccccChhhHHHHH
Q 025845 167 IYQLCPPEVINLLRITFIGRAIVLRQIVSYLYLDSDTMQIMLNFIIIIIITTH-MSELINCSRRAFFLYHNTLFIQFV 243 (247)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~D~~~p~~~~~~~~~~~~~~~-~~~~i~~~gH~~~~e~p~~~~~~v 243 (247)
+ ........++.+.++.+|++|.++|......+. +..++. +-.++.++||.- ++...++.+.+
T Consensus 182 f------------~~i~kI~~i~~PVLiiHgtdDevv~~sHg~~Ly-e~~k~~~epl~v~g~gH~~-~~~~~~yi~~l 245 (258)
T KOG1552|consen 182 F------------PNIEKISKITCPVLIIHGTDDEVVDFSHGKALY-ERCKEKVEPLWVKGAGHND-IELYPEYIEHL 245 (258)
T ss_pred c------------cccCcceeccCCEEEEecccCceecccccHHHH-HhccccCCCcEEecCCCcc-cccCHHHHHHH
Confidence 0 003334455668888899999999999999998 877765 889999999983 34443444433
No 73
>PLN02442 S-formylglutathione hydrolase
Probab=99.65 E-value=8.8e-15 Score=113.64 Aligned_cols=106 Identities=16% Similarity=0.158 Sum_probs=76.2
Q ss_pred CCCcEEEEEcCCCCChhhHHH---HHHHHHhCCcEEEEecCCCCCC-----CCC-------------ccc-----C--cc
Q 025845 7 MEEKHFVLVHGVNHGAWCWYK---LKARLVAGGHRVTAVDLAASGI-----NMK-------------RIE-----D--VH 58 (247)
Q Consensus 7 ~~~~~iv~lhG~~~~~~~~~~---~~~~l~~~g~~vi~~D~~G~G~-----S~~-------------~~~-----~--~~ 58 (247)
...|.|+|+||++++...|.. +...+...|+.|+.+|.+++|. +.. ... . .+
T Consensus 45 ~~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (283)
T PLN02442 45 GKVPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWKNWRMYDY 124 (283)
T ss_pred CCCCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCcceeeccccCCCcccchhhh
Confidence 356899999999998887743 3355566799999999987761 110 000 0 01
Q ss_pred CHHHhHHHHHHHHHhCCCCCcEEEEEEehhHHHHHHHHHhCCCccceEEEEeccC
Q 025845 59 TFHAYSEPLMEVLASLPAEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFM 113 (247)
Q Consensus 59 ~~~~~~~~l~~~i~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 113 (247)
-.+++.+.+.+.+..+ +.++++++||||||..|+.++.++|+++++++.+++..
T Consensus 125 ~~~~l~~~i~~~~~~~-~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~ 178 (283)
T PLN02442 125 VVKELPKLLSDNFDQL-DTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIA 178 (283)
T ss_pred HHHHHHHHHHHHHHhc-CCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCcc
Confidence 1233344444444556 67899999999999999999999999999999988863
No 74
>PLN00021 chlorophyllase
Probab=99.64 E-value=2.1e-15 Score=117.95 Aligned_cols=106 Identities=22% Similarity=0.135 Sum_probs=78.1
Q ss_pred CCCCcEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhC------CCCCc
Q 025845 6 GMEEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASL------PAEEK 79 (247)
Q Consensus 6 ~~~~~~iv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l------~~~~~ 79 (247)
....|+|||+||++.+...|..+++.|+++||.|+++|++|++.+.... ...+..+..+.+.+.++.+ .+.++
T Consensus 49 ~g~~PvVv~lHG~~~~~~~y~~l~~~Las~G~~VvapD~~g~~~~~~~~-~i~d~~~~~~~l~~~l~~~l~~~~~~d~~~ 127 (313)
T PLN00021 49 AGTYPVLLFLHGYLLYNSFYSQLLQHIASHGFIVVAPQLYTLAGPDGTD-EIKDAAAVINWLSSGLAAVLPEGVRPDLSK 127 (313)
T ss_pred CCCCCEEEEECCCCCCcccHHHHHHHHHhCCCEEEEecCCCcCCCCchh-hHHHHHHHHHHHHhhhhhhcccccccChhh
Confidence 3456899999999999999999999999889999999999975432111 1112223333333322221 14478
Q ss_pred EEEEEEehhHHHHHHHHHhCCC-----ccceEEEEecc
Q 025845 80 VILVGHSLGGVTLALAADKFPH-----KISVAVFVTAF 112 (247)
Q Consensus 80 ~~lvGhS~Gg~ia~~~a~~~p~-----~v~~lvl~~~~ 112 (247)
+.++||||||.+++.+|.++++ +++++|++++.
T Consensus 128 v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv 165 (313)
T PLN00021 128 LALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPV 165 (313)
T ss_pred eEEEEECcchHHHHHHHhhccccccccceeeEEeeccc
Confidence 9999999999999999998874 58899998885
No 75
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.63 E-value=3.2e-15 Score=112.90 Aligned_cols=104 Identities=14% Similarity=0.189 Sum_probs=85.7
Q ss_pred cEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCCcEEEEEEehhH
Q 025845 10 KHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGG 89 (247)
Q Consensus 10 ~~iv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~lvGhS~Gg 89 (247)
++|+++|+.+|+...|.++++.|....+.|+.++.+|.+....+ ..+++++++...+.|.......++.|+|||+||
T Consensus 1 ~~lf~~p~~gG~~~~y~~la~~l~~~~~~v~~i~~~~~~~~~~~---~~si~~la~~y~~~I~~~~~~gp~~L~G~S~Gg 77 (229)
T PF00975_consen 1 RPLFCFPPAGGSASSYRPLARALPDDVIGVYGIEYPGRGDDEPP---PDSIEELASRYAEAIRARQPEGPYVLAGWSFGG 77 (229)
T ss_dssp -EEEEESSTTCSGGGGHHHHHHHTTTEEEEEEECSTTSCTTSHE---ESSHHHHHHHHHHHHHHHTSSSSEEEEEETHHH
T ss_pred CeEEEEcCCccCHHHHHHHHHhCCCCeEEEEEEecCCCCCCCCC---CCCHHHHHHHHHHHhhhhCCCCCeeehccCccH
Confidence 48999999999999999999999842399999999999833333 369999999999988887333499999999999
Q ss_pred HHHHHHHHhC---CCccceEEEEeccCCCC
Q 025845 90 VTLALAADKF---PHKISVAVFVTAFMPDT 116 (247)
Q Consensus 90 ~ia~~~a~~~---p~~v~~lvl~~~~~~~~ 116 (247)
.+|.++|.+. ...|..++++++..|..
T Consensus 78 ~lA~E~A~~Le~~G~~v~~l~liD~~~p~~ 107 (229)
T PF00975_consen 78 ILAFEMARQLEEAGEEVSRLILIDSPPPSI 107 (229)
T ss_dssp HHHHHHHHHHHHTT-SESEEEEESCSSTTC
T ss_pred HHHHHHHHHHHHhhhccCceEEecCCCCCc
Confidence 9999999753 44699999999875544
No 76
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.62 E-value=6.1e-15 Score=115.89 Aligned_cols=224 Identities=11% Similarity=-0.004 Sum_probs=134.6
Q ss_pred CCCcEEEEEcCCCCChhh--HHHHHHHHHhCCcEEEEecCCCCCCCCCcccCc---cCHHHhHHHHHHHHHhCCCCCcEE
Q 025845 7 MEEKHFVLVHGVNHGAWC--WYKLKARLVAGGHRVTAVDLAASGINMKRIEDV---HTFHAYSEPLMEVLASLPAEEKVI 81 (247)
Q Consensus 7 ~~~~~iv~lhG~~~~~~~--~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~---~~~~~~~~~l~~~i~~l~~~~~~~ 81 (247)
...|.||++||+.+++.. -+.++..+.++||+|++++.||+|.|+-..+.. ...+|+.+-+..+-+.. ...+..
T Consensus 123 ~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g~~LtTpr~f~ag~t~Dl~~~v~~i~~~~-P~a~l~ 201 (409)
T KOG1838|consen 123 GTDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGGSKLTTPRLFTAGWTEDLREVVNHIKKRY-PQAPLF 201 (409)
T ss_pred CCCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCCCccCCCceeecCCHHHHHHHHHHHHHhC-CCCceE
Confidence 566999999999765543 578888888899999999999999997554321 13333333333333334 567999
Q ss_pred EEEEehhHHHHHHHHHhCCC---ccceEEEEeccCCCCCCC-------hHHHHHHHHH-hh----cCCCCcccccccccc
Q 025845 82 LVGHSLGGVTLALAADKFPH---KISVAVFVTAFMPDTTHR-------PSFVLEQYSE-KM----GKEDDSWLDTQFSQC 146 (247)
Q Consensus 82 lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~~~~~~~~-------~~~~~~~~~~-~~----~~~~~~~~~~~~~~~ 146 (247)
.+|.||||++...|..+..+ .+.++++.+|+ ...... ...+...+.. .+ ......++.....+-
T Consensus 202 avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pw-d~~~~~~~~~~~~~~~~y~~~l~~~l~~~~~~~r~~~~~~~vd~d 280 (409)
T KOG1838|consen 202 AVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPW-DLLAASRSIETPLYRRFYNRALTLNLKRIVLRHRHTLFEDPVDFD 280 (409)
T ss_pred EEEecchHHHHHHHhhhccCCCCceeEEEEeccc-hhhhhhhHHhcccchHHHHHHHHHhHHHHHhhhhhhhhhccchhh
Confidence 99999999999999876543 24455555554 321011 0111111111 10 000010111111000
Q ss_pred c--CCCCcccceeechhhHHHHHhcCCCcchhhhhhhhhcccchhHHhhhhhhccchhHHHHHHHHHHHhhcCCcceeee
Q 025845 147 D--ASNPSHISMLFGREFLTIKIYQLCPPEVINLLRITFIGRAIVLRQIVSYLYLDSDTMQIMLNFIIIIIITTHMSELI 224 (247)
Q Consensus 147 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~D~~~p~~~~~~~~~~~~~~~~~~~i 224 (247)
. ..+. ...++..+....+.-....+.+...........+.++-+..+..+|.++|......-.....|+.-+++-
T Consensus 281 ~~~~~~S---vreFD~~~t~~~~gf~~~deYY~~aSs~~~v~~I~VP~L~ina~DDPv~p~~~ip~~~~~~np~v~l~~T 357 (409)
T KOG1838|consen 281 VILKSRS---VREFDEALTRPMFGFKSVDEYYKKASSSNYVDKIKVPLLCINAADDPVVPEEAIPIDDIKSNPNVLLVIT 357 (409)
T ss_pred hhhhcCc---HHHHHhhhhhhhcCCCcHHHHHhhcchhhhcccccccEEEEecCCCCCCCcccCCHHHHhcCCcEEEEEe
Confidence 0 1111 2233333333333223334445556666777888888888889999999997554433377899999999
Q ss_pred cCCCccccccC
Q 025845 225 NCSRRAFFLYH 235 (247)
Q Consensus 225 ~~~gH~~~~e~ 235 (247)
..+||.-|+|.
T Consensus 358 ~~GGHlgfleg 368 (409)
T KOG1838|consen 358 SHGGHLGFLEG 368 (409)
T ss_pred CCCceeeeecc
Confidence 99999999997
No 77
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.62 E-value=4.8e-15 Score=126.46 Aligned_cols=90 Identities=21% Similarity=0.205 Sum_probs=76.4
Q ss_pred CcEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEecCCCCCCCCCc---------ccC-------------ccCHHHhHHH
Q 025845 9 EKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKR---------IED-------------VHTFHAYSEP 66 (247)
Q Consensus 9 ~~~iv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~---------~~~-------------~~~~~~~~~~ 66 (247)
.|+|||+||++++...|..+++.|.++||+|+++|+||||.|... ... ..++.+.+.|
T Consensus 449 ~P~VVllHG~~g~~~~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~D 528 (792)
T TIGR03502 449 WPVVIYQHGITGAKENALAFAGTLAAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQSILD 528 (792)
T ss_pred CcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCHHHHHHH
Confidence 368999999999999999999999888999999999999999443 111 1378999999
Q ss_pred HHHHHHhCC---------------CCCcEEEEEEehhHHHHHHHHHh
Q 025845 67 LMEVLASLP---------------AEEKVILVGHSLGGVTLALAADK 98 (247)
Q Consensus 67 l~~~i~~l~---------------~~~~~~lvGhS~Gg~ia~~~a~~ 98 (247)
+..+...+. ...+++++||||||++++.++..
T Consensus 529 ll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 529 LLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred HHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 999888872 13599999999999999999875
No 78
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.59 E-value=7e-15 Score=109.82 Aligned_cols=189 Identities=13% Similarity=0.048 Sum_probs=105.4
Q ss_pred HHHHHHHHHhCCcEEEEecCCCCCCCCCcc-------cCccCHHHhHHHHHHHHHhC-CCCCcEEEEEEehhHHHHHHHH
Q 025845 25 WYKLKARLVAGGHRVTAVDLAASGINMKRI-------EDVHTFHAYSEPLMEVLASL-PAEEKVILVGHSLGGVTLALAA 96 (247)
Q Consensus 25 ~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~-------~~~~~~~~~~~~l~~~i~~l-~~~~~~~lvGhS~Gg~ia~~~a 96 (247)
|+.....|+++||.|+.+|+||.+...... .....+++..+.+..+++.- -+.+++.++|||+||.+++.++
T Consensus 3 f~~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~ 82 (213)
T PF00326_consen 3 FNWNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAA 82 (213)
T ss_dssp -SHHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHH
T ss_pred eeHHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhh
Confidence 456678888899999999999987543211 01123333444444443332 1458999999999999999999
Q ss_pred HhCCCccceEEEEeccCCCCCCChHHHHHHHHHhhcCCCCcccccccccccCCCCcccceeechhhHHHHHhcCCCcchh
Q 025845 97 DKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFLTIKIYQLCPPEVI 176 (247)
Q Consensus 97 ~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (247)
.++|++++++|..++............. +... ..... ..+ .. .++..
T Consensus 83 ~~~~~~f~a~v~~~g~~d~~~~~~~~~~--~~~~-----------~~~~~--~~~---~~--~~~~~------------- 129 (213)
T PF00326_consen 83 TQHPDRFKAAVAGAGVSDLFSYYGTTDI--YTKA-----------EYLEY--GDP---WD--NPEFY------------- 129 (213)
T ss_dssp HHTCCGSSEEEEESE-SSTTCSBHHTCC--HHHG-----------HHHHH--SST---TT--SHHHH-------------
T ss_pred cccceeeeeeeccceecchhcccccccc--cccc-----------ccccc--Ccc---ch--hhhhh-------------
Confidence 9999999999988886433222211000 1100 00000 000 00 11111
Q ss_pred hhhhhhhcccc--hhHHhhhhhhccchhHHHHHHHHHHHh---hcCCcceeeecCCCcccc-ccChhhHHHHHHhh
Q 025845 177 NLLRITFIGRA--IVLRQIVSYLYLDSDTMQIMLNFIIII---IITTHMSELINCSRRAFF-LYHNTLFIQFVYVL 246 (247)
Q Consensus 177 ~~~~~~~~~~~--~~~~~~l~~g~~D~~~p~~~~~~~~~~---~~~~~~~~~i~~~gH~~~-~e~p~~~~~~v~~~ 246 (247)
........... ...+.++.+|+.|..+|...+..+... ....+++.++|++||... -++...+.+.++++
T Consensus 130 ~~~s~~~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~~~~~~~~~~~~~f 205 (213)
T PF00326_consen 130 RELSPISPADNVQIKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGNPENRRDWYERILDF 205 (213)
T ss_dssp HHHHHGGGGGGCGGGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTSHHHHHHHHHHHHHH
T ss_pred hhhccccccccccCCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCCchhHHHHHHHHHHH
Confidence 11111111112 556667888999999988877766522 224589999999999433 33444555555443
No 79
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.56 E-value=1e-13 Score=103.37 Aligned_cols=107 Identities=15% Similarity=0.134 Sum_probs=74.2
Q ss_pred CCCcEEEEEcCCCCChhhHH---HHHHHHHhCCcEEEEecCCCCCCCCCccc----Cc-cCHHHhHHHHHHHHHh----C
Q 025845 7 MEEKHFVLVHGVNHGAWCWY---KLKARLVAGGHRVTAVDLAASGINMKRIE----DV-HTFHAYSEPLMEVLAS----L 74 (247)
Q Consensus 7 ~~~~~iv~lhG~~~~~~~~~---~~~~~l~~~g~~vi~~D~~G~G~S~~~~~----~~-~~~~~~~~~l~~~i~~----l 74 (247)
...|.||++||.+++...|. .+...+.+.||.|+++|++|++.+..... .. ........++.++++. .
T Consensus 11 ~~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 90 (212)
T TIGR01840 11 GPRALVLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKANY 90 (212)
T ss_pred CCCCEEEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHHhc
Confidence 45789999999998887765 34455555799999999999875532110 00 0001122233333332 2
Q ss_pred C-CCCcEEEEEEehhHHHHHHHHHhCCCccceEEEEeccC
Q 025845 75 P-AEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFM 113 (247)
Q Consensus 75 ~-~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 113 (247)
. +.+++.|+|||+||.+++.++.++|+++.+++.+++..
T Consensus 91 ~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~ 130 (212)
T TIGR01840 91 SIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLP 130 (212)
T ss_pred CcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCc
Confidence 1 33689999999999999999999999999999888763
No 80
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=99.56 E-value=1.6e-13 Score=102.49 Aligned_cols=119 Identities=18% Similarity=0.203 Sum_probs=78.5
Q ss_pred CCCcEEEEEcCCCCChhhHHHHHHHHHh--------CCcEEEEecCCCCCCCCCcccCccCHHHhHHHHH----HHHHhC
Q 025845 7 MEEKHFVLVHGVNHGAWCWYKLKARLVA--------GGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLM----EVLASL 74 (247)
Q Consensus 7 ~~~~~iv~lhG~~~~~~~~~~~~~~l~~--------~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~----~~i~~l 74 (247)
.+|.||||+||.+|+...|+.+...+.+ ..++++++|+......-.. ..+.+.++.+. .+++..
T Consensus 2 ~~g~pVlFIhG~~Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~g----~~l~~q~~~~~~~i~~i~~~~ 77 (225)
T PF07819_consen 2 LSGIPVLFIHGNAGSYKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFHG----RTLQRQAEFLAEAIKYILELY 77 (225)
T ss_pred CCCCEEEEECcCCCCHhHHHHHHHHHhhhhhhccCccceeEEEeccCcccccccc----ccHHHHHHHHHHHHHHHHHhh
Confidence 4689999999999999999888876631 2478999998765322111 12333333222 232222
Q ss_pred ----CCCCcEEEEEEehhHHHHHHHHHhCC---CccceEEEEeccCCCCCCChHHHHHHHHH
Q 025845 75 ----PAEEKVILVGHSLGGVTLALAADKFP---HKISVAVFVTAFMPDTTHRPSFVLEQYSE 129 (247)
Q Consensus 75 ----~~~~~~~lvGhS~Gg~ia~~~a~~~p---~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 129 (247)
...++++||||||||.+|..++...+ +.|+.+|.++++..............+..
T Consensus 78 ~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~g~~~~~d~~~~~~y~ 139 (225)
T PF07819_consen 78 KSNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHRGSPLAFDRSLDRFYK 139 (225)
T ss_pred hhccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCCCccccchHHHHHHHH
Confidence 36789999999999999988886543 57999999998654444333333444333
No 81
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=99.53 E-value=2e-13 Score=102.94 Aligned_cols=230 Identities=10% Similarity=0.006 Sum_probs=119.5
Q ss_pred CCcEEEEEcCCCCChhh-HHHHH-----HHHHhCCcEEEEecCCCCCCCCCcccC---ccCHHHhHHHHHHHHHhCCCCC
Q 025845 8 EEKHFVLVHGVNHGAWC-WYKLK-----ARLVAGGHRVTAVDLAASGINMKRIED---VHTFHAYSEPLMEVLASLPAEE 78 (247)
Q Consensus 8 ~~~~iv~lhG~~~~~~~-~~~~~-----~~l~~~g~~vi~~D~~G~G~S~~~~~~---~~~~~~~~~~l~~~i~~l~~~~ 78 (247)
++|+||=.|-.|.+... |..+. +.+. +.+-|+-+|-||+..-..+-+. .-|++++|+++.++++++ +.+
T Consensus 22 ~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~-~~f~i~Hi~aPGqe~ga~~~p~~y~yPsmd~LAe~l~~Vl~~f-~lk 99 (283)
T PF03096_consen 22 NKPAILTYHDVGLNHKSCFQGFFNFEDMQEIL-QNFCIYHIDAPGQEEGAATLPEGYQYPSMDQLAEMLPEVLDHF-GLK 99 (283)
T ss_dssp TS-EEEEE--TT--HHHHCHHHHCSHHHHHHH-TTSEEEEEE-TTTSTT-----TT-----HHHHHCTHHHHHHHH-T--
T ss_pred CCceEEEeccccccchHHHHHHhcchhHHHHh-hceEEEEEeCCCCCCCcccccccccccCHHHHHHHHHHHHHhC-Ccc
Confidence 49999999999988765 65544 4566 4699999999999766543322 349999999999999999 999
Q ss_pred cEEEEEEehhHHHHHHHHHhCCCccceEEEEeccCCCCCCChHHHHHHHHHhh--cCCCCcccccccccccCCCCcccce
Q 025845 79 KVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKM--GKEDDSWLDTQFSQCDASNPSHISM 156 (247)
Q Consensus 79 ~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (247)
.++-+|---||.|...+|.++|++|.++||+++.....+ -.++...++.... ...+.........+...++. ..
T Consensus 100 ~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~g-w~Ew~~~K~~~~~L~~~gmt~~~~d~Ll~h~Fg~~---~~ 175 (283)
T PF03096_consen 100 SVIGFGVGAGANILARFALKHPERVLGLILVNPTCTAAG-WMEWFYQKLSSWLLYSYGMTSSVKDYLLWHYFGKE---EE 175 (283)
T ss_dssp -EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S----HHHHHHHHHH-------CTTS-HHHHHHHHHS-HH---HH
T ss_pred EEEEEeeccchhhhhhccccCccceeEEEEEecCCCCcc-HHHHHHHHHhcccccccccccchHHhhhhcccccc---cc
Confidence 999999999999999999999999999999999633322 2233444444211 00122222111111111111 11
Q ss_pred eechhhHHHH---HhcCCC-cchhhhhhhhhc-------ccchhHHhhhhhhccchhHHHHHHHHHHHhhc-CCcceeee
Q 025845 157 LFGREFLTIK---IYQLCP-PEVINLLRITFI-------GRAIVLRQIVSYLYLDSDTMQIMLNFIIIIII-TTHMSELI 224 (247)
Q Consensus 157 ~~~~~~~~~~---~~~~~~-~~~~~~~~~~~~-------~~~~~~~~~l~~g~~D~~~p~~~~~~~~~~~~-~~~~~~~i 224 (247)
....+.++.+ +..... .+.......... .....++.++.-|+........ .++..+.- ..+++..+
T Consensus 176 ~~n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~~R~DL~~~~~~~~c~vLlvvG~~Sp~~~~v--v~~ns~Ldp~~ttllkv 253 (283)
T PF03096_consen 176 ENNSDLVQTYRQHLDERINPKNLALFLNSYNSRTDLSIERPSLGCPVLLVVGDNSPHVDDV--VEMNSKLDPTKTTLLKV 253 (283)
T ss_dssp HCT-HHHHHHHHHHHT-TTHHHHHHHHHHHHT-----SECTTCCS-EEEEEETTSTTHHHH--HHHHHHS-CCCEEEEEE
T ss_pred cccHHHHHHHHHHHhcCCCHHHHHHHHHHHhccccchhhcCCCCCCeEEEEecCCcchhhH--HHHHhhcCcccceEEEe
Confidence 1122222222 111111 111111111110 1111233334446666544333 23431222 45789999
Q ss_pred cCCCccccccChhhHHHHHHh
Q 025845 225 NCSRRAFFLYHNTLFIQFVYV 245 (247)
Q Consensus 225 ~~~gH~~~~e~p~~~~~~v~~ 245 (247)
+++|=.+..|+|++.++.+.=
T Consensus 254 ~dcGglV~eEqP~klaea~~l 274 (283)
T PF03096_consen 254 ADCGGLVLEEQPGKLAEAFKL 274 (283)
T ss_dssp TT-TT-HHHH-HHHHHHHHHH
T ss_pred cccCCcccccCcHHHHHHHHH
Confidence 999999999999999988753
No 82
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.53 E-value=1.8e-13 Score=104.99 Aligned_cols=102 Identities=20% Similarity=0.248 Sum_probs=92.8
Q ss_pred cEEEEEcCCCCChhhHHHHHHHHHhC---C------cEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCCcE
Q 025845 10 KHFVLVHGVNHGAWCWYKLKARLVAG---G------HRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKV 80 (247)
Q Consensus 10 ~~iv~lhG~~~~~~~~~~~~~~l~~~---g------~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~ 80 (247)
-||+++|||+|+-..|..+++.|.+. | |.||++.+||+|-|+.+.....+..+.|..+..++-.| +.+++
T Consensus 153 ~PlLl~HGwPGsv~EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~sk~GFn~~a~ArvmrkLMlRL-g~nkf 231 (469)
T KOG2565|consen 153 KPLLLLHGWPGSVREFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPSKTGFNAAATARVMRKLMLRL-GYNKF 231 (469)
T ss_pred cceEEecCCCchHHHHHhhhhhhcCccccCCccceeEEEeccCCCCcccCcCCccCCccHHHHHHHHHHHHHHh-Cccee
Confidence 49999999999999999999999763 2 78999999999999999877789999999999999999 99999
Q ss_pred EEEEEehhHHHHHHHHHhCCCccceEEEEecc
Q 025845 81 ILVGHSLGGVTLALAADKFPHKISVAVFVTAF 112 (247)
Q Consensus 81 ~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 112 (247)
.+=|-.||+.|+..+|..||++|.++=+-.+.
T Consensus 232 fiqGgDwGSiI~snlasLyPenV~GlHlnm~~ 263 (469)
T KOG2565|consen 232 FIQGGDWGSIIGSNLASLYPENVLGLHLNMCF 263 (469)
T ss_pred EeecCchHHHHHHHHHhhcchhhhHhhhcccc
Confidence 99999999999999999999999887655443
No 83
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=99.53 E-value=1.9e-12 Score=96.60 Aligned_cols=236 Identities=9% Similarity=-0.041 Sum_probs=141.9
Q ss_pred CCCCC--CcEEEEEcCCCCChhh-HHH-----HHHHHHhCCcEEEEecCCCCCCCCCcc--c-CccCHHHhHHHHHHHHH
Q 025845 4 VVGME--EKHFVLVHGVNHGAWC-WYK-----LKARLVAGGHRVTAVDLAASGINMKRI--E-DVHTFHAYSEPLMEVLA 72 (247)
Q Consensus 4 ~~~~~--~~~iv~lhG~~~~~~~-~~~-----~~~~l~~~g~~vi~~D~~G~G~S~~~~--~-~~~~~~~~~~~l~~~i~ 72 (247)
.|+++ +|+++=.|.++.+... |.. -...+.++ |-|+.+|-||+-...+.- + ..-|.+++|++|..+++
T Consensus 39 ~Gd~~~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~-fcv~HV~~PGqe~gAp~~p~~y~yPsmd~LAd~l~~VL~ 117 (326)
T KOG2931|consen 39 YGDPKGNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEH-FCVYHVDAPGQEDGAPSFPEGYPYPSMDDLADMLPEVLD 117 (326)
T ss_pred ecCCCCCCceEEEecccccchHhHhHHhhcCHhHHHHHhh-eEEEecCCCccccCCccCCCCCCCCCHHHHHHHHHHHHH
Confidence 45555 8999999999987765 643 34566655 999999999986554322 2 13499999999999999
Q ss_pred hCCCCCcEEEEEEehhHHHHHHHHHhCCCccceEEEEeccCCCCCCChHHHHHHHHHhh--cCCCCcccccccccccCCC
Q 025845 73 SLPAEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKM--GKEDDSWLDTQFSQCDASN 150 (247)
Q Consensus 73 ~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 150 (247)
++ +.+.++-+|---|++|...+|.++|+||.+|||+++.....+- .+|...++...+ ...+.......+.....++
T Consensus 118 ~f-~lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a~gw-iew~~~K~~s~~l~~~Gmt~~~~d~ll~H~Fg~ 195 (326)
T KOG2931|consen 118 HF-GLKSVIGMGVGAGAYILARFALNHPERVLGLVLINCDPCAKGW-IEWAYNKVSSNLLYYYGMTQGVKDYLLAHHFGK 195 (326)
T ss_pred hc-CcceEEEecccccHHHHHHHHhcChhheeEEEEEecCCCCchH-HHHHHHHHHHHHHHhhchhhhHHHHHHHHHhcc
Confidence 99 9999999999999999999999999999999999986333222 234555555322 0011111111111111111
Q ss_pred CcccceeechhhHHHHH---hcCCC-cchhhhhhhhhc-----------ccchhHHhhhhhhccchhHHHHHHHHHHHhh
Q 025845 151 PSHISMLFGREFLTIKI---YQLCP-PEVINLLRITFI-----------GRAIVLRQIVSYLYLDSDTMQIMLNFIIIII 215 (247)
Q Consensus 151 ~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~-----------~~~~~~~~~l~~g~~D~~~p~~~~~~~~~~~ 215 (247)
. ......+.++++. ..... .+.......... .....++.++.-|+....+.. ..++..+.
T Consensus 196 e---~~~~~~diVq~Yr~~l~~~~N~~Nl~~fl~ayn~R~DL~~~r~~~~~tlkc~vllvvGd~Sp~~~~--vv~~n~~L 270 (326)
T KOG2931|consen 196 E---ELGNNSDIVQEYRQHLGERLNPKNLALFLNAYNGRRDLSIERPKLGTTLKCPVLLVVGDNSPHVSA--VVECNSKL 270 (326)
T ss_pred c---cccccHHHHHHHHHHHHhcCChhHHHHHHHHhcCCCCccccCCCcCccccccEEEEecCCCchhhh--hhhhhccc
Confidence 1 1111333333332 11111 111111111100 002223444444665554322 22222111
Q ss_pred -cCCcceeeecCCCccccccChhhHHHHHHhhC
Q 025845 216 -ITTHMSELINCSRRAFFLYHNTLFIQFVYVLC 247 (247)
Q Consensus 216 -~~~~~~~~i~~~gH~~~~e~p~~~~~~v~~~~ 247 (247)
-.+..+..+.++|=.+..|+|.+.++.+.=+|
T Consensus 271 dp~~ttllk~~d~g~l~~e~qP~kl~ea~~~Fl 303 (326)
T KOG2931|consen 271 DPTYTTLLKMADCGGLVQEEQPGKLAEAFKYFL 303 (326)
T ss_pred CcccceEEEEcccCCcccccCchHHHHHHHHHH
Confidence 24678999999999999999999998875443
No 84
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=99.51 E-value=1e-13 Score=85.52 Aligned_cols=65 Identities=22% Similarity=0.308 Sum_probs=59.3
Q ss_pred CCcEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHH
Q 025845 8 EEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLA 72 (247)
Q Consensus 8 ~~~~iv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~ 72 (247)
.+..|+++||++.+...|..+++.|++.||.|+++|+||||.|+.......+++++++|+..+++
T Consensus 15 ~k~~v~i~HG~~eh~~ry~~~a~~L~~~G~~V~~~D~rGhG~S~g~rg~~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 15 PKAVVVIVHGFGEHSGRYAHLAEFLAEQGYAVFAYDHRGHGRSEGKRGHIDSFDDYVDDLHQFIQ 79 (79)
T ss_pred CCEEEEEeCCcHHHHHHHHHHHHHHHhCCCEEEEECCCcCCCCCCcccccCCHHHHHHHHHHHhC
Confidence 46799999999999999999999999999999999999999999766666799999999998874
No 85
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.51 E-value=6.1e-14 Score=118.68 Aligned_cols=105 Identities=16% Similarity=0.033 Sum_probs=82.7
Q ss_pred CCCcEEEEEcCCCCChh---hH-HHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCC----CCC
Q 025845 7 MEEKHFVLVHGVNHGAW---CW-YKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLP----AEE 78 (247)
Q Consensus 7 ~~~~~iv~lhG~~~~~~---~~-~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~----~~~ 78 (247)
...|+||++||++.+.. .+ ......|.++||.|+++|+||+|.|...... ++ ...++|+.++++.+. ...
T Consensus 20 ~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~~-~~-~~~~~D~~~~i~~l~~q~~~~~ 97 (550)
T TIGR00976 20 GPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFDL-LG-SDEAADGYDLVDWIAKQPWCDG 97 (550)
T ss_pred CCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCceEe-cC-cccchHHHHHHHHHHhCCCCCC
Confidence 35689999999987653 22 2345677778999999999999999876532 23 567777777777651 235
Q ss_pred cEEEEEEehhHHHHHHHHHhCCCccceEEEEeccC
Q 025845 79 KVILVGHSLGGVTLALAADKFPHKISVAVFVTAFM 113 (247)
Q Consensus 79 ~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 113 (247)
++.++|||+||.+++.+|..+|++++++|..++..
T Consensus 98 ~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~ 132 (550)
T TIGR00976 98 NVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVW 132 (550)
T ss_pred cEEEEEeChHHHHHHHHhccCCCceeEEeecCccc
Confidence 99999999999999999999999999999887753
No 86
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.51 E-value=2.5e-14 Score=101.90 Aligned_cols=185 Identities=14% Similarity=0.088 Sum_probs=122.1
Q ss_pred CCCcEEEEEcCCCCChhhHHHHHHHH-HhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCC--CCCcEEEE
Q 025845 7 MEEKHFVLVHGVNHGAWCWYKLKARL-VAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLP--AEEKVILV 83 (247)
Q Consensus 7 ~~~~~iv~lhG~~~~~~~~~~~~~~l-~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~--~~~~~~lv 83 (247)
.+.|+++++||..|+-...-+++.-+ ..-+.+|..+++||+|.|.+.+.+ -...-.++.+.+-+..-. ...+++|.
T Consensus 76 ~S~pTlLyfh~NAGNmGhr~~i~~~fy~~l~mnv~ivsYRGYG~S~GspsE-~GL~lDs~avldyl~t~~~~dktkivlf 154 (300)
T KOG4391|consen 76 SSRPTLLYFHANAGNMGHRLPIARVFYVNLKMNVLIVSYRGYGKSEGSPSE-EGLKLDSEAVLDYLMTRPDLDKTKIVLF 154 (300)
T ss_pred CCCceEEEEccCCCcccchhhHHHHHHHHcCceEEEEEeeccccCCCCccc-cceeccHHHHHHHHhcCccCCcceEEEE
Confidence 47899999999999998887777655 335689999999999999876643 123333333333222211 56799999
Q ss_pred EEehhHHHHHHHHHhCCCccceEEEEeccCCCCCCChHHHHHHHHHhhcCCCCcccccccccccCCCCcccceeechhhH
Q 025845 84 GHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFL 163 (247)
Q Consensus 84 GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (247)
|-|+||.+|..+|.+..+++.++|+.+++..-+... ... ...+.-..+
T Consensus 155 GrSlGGAvai~lask~~~ri~~~ivENTF~SIp~~~--------i~~------------------------v~p~~~k~i 202 (300)
T KOG4391|consen 155 GRSLGGAVAIHLASKNSDRISAIIVENTFLSIPHMA--------IPL------------------------VFPFPMKYI 202 (300)
T ss_pred ecccCCeeEEEeeccchhheeeeeeechhccchhhh--------hhe------------------------eccchhhHH
Confidence 999999999999999999999999998863211110 000 000000111
Q ss_pred HHHHhcCCCcchhhhhhhhhcccchhHHhhhhhhccchhHHHHHHHHHHHhhcC--CcceeeecCCCcccc
Q 025845 164 TIKIYQLCPPEVINLLRITFIGRAIVLRQIVSYLYLDSDTMQIMLNFIIIIIIT--THMSELINCSRRAFF 232 (247)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~D~~~p~~~~~~~~~~~~~--~~~~~~i~~~gH~~~ 232 (247)
..+++..... .........++-++..|..|.++|+...+.+. +..| ..++..+|++.|.=-
T Consensus 203 ~~lc~kn~~~-------S~~ki~~~~~P~LFiSGlkDelVPP~~Mr~Ly-~~c~S~~Krl~eFP~gtHNDT 265 (300)
T KOG4391|consen 203 PLLCYKNKWL-------SYRKIGQCRMPFLFISGLKDELVPPVMMRQLY-ELCPSRTKRLAEFPDGTHNDT 265 (300)
T ss_pred HHHHHHhhhc-------chhhhccccCceEEeecCccccCCcHHHHHHH-HhCchhhhhheeCCCCccCce
Confidence 1111111101 11111133455667789999999999999998 8776 467999999999743
No 87
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.50 E-value=1.4e-12 Score=100.91 Aligned_cols=105 Identities=16% Similarity=0.236 Sum_probs=82.6
Q ss_pred CcEEEEEcCCCCChhh-----------HHHHHH---HHHhCCcEEEEecCCCCC-CCCCcc----c--------CccCHH
Q 025845 9 EKHFVLVHGVNHGAWC-----------WYKLKA---RLVAGGHRVTAVDLAASG-INMKRI----E--------DVHTFH 61 (247)
Q Consensus 9 ~~~iv~lhG~~~~~~~-----------~~~~~~---~l~~~g~~vi~~D~~G~G-~S~~~~----~--------~~~~~~ 61 (247)
...|+++||+.++.+. |+.++. .+.-..|.||+.|-.|.. .|.+|. . ..+++.
T Consensus 51 ~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~~p~g~~yg~~FP~~ti~ 130 (368)
T COG2021 51 DNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSINPGGKPYGSDFPVITIR 130 (368)
T ss_pred CceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCcCCCCCccccCCCcccHH
Confidence 4689999999985543 444442 233245999999999965 444332 1 246889
Q ss_pred HhHHHHHHHHHhCCCCCcEE-EEEEehhHHHHHHHHHhCCCccceEEEEeccCC
Q 025845 62 AYSEPLMEVLASLPAEEKVI-LVGHSLGGVTLALAADKFPHKISVAVFVTAFMP 114 (247)
Q Consensus 62 ~~~~~l~~~i~~l~~~~~~~-lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 114 (247)
++++.-..++++| +++++. +||-||||+-|++.+..||++|.++|.+++...
T Consensus 131 D~V~aq~~ll~~L-GI~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r 183 (368)
T COG2021 131 DMVRAQRLLLDAL-GIKKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAAR 183 (368)
T ss_pred HHHHHHHHHHHhc-CcceEeeeeccChHHHHHHHHHHhChHHHhhhheeccccc
Confidence 9999999999999 888888 899999999999999999999999999998643
No 88
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.49 E-value=2.3e-13 Score=107.87 Aligned_cols=202 Identities=16% Similarity=0.109 Sum_probs=109.7
Q ss_pred CCCCcEEEEEcCCCCChhh-HHHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCC--CCCcEEE
Q 025845 6 GMEEKHFVLVHGVNHGAWC-WYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLP--AEEKVIL 82 (247)
Q Consensus 6 ~~~~~~iv~lhG~~~~~~~-~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~--~~~~~~l 82 (247)
+...|+||++.|+-+.... |..+.+.|..+|+.++++|+||.|.|+..+.. .+.+.+.+.+.+.+...+ +-+++.+
T Consensus 187 ~~p~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l~-~D~~~l~~aVLd~L~~~p~VD~~RV~~ 265 (411)
T PF06500_consen 187 EKPYPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPLT-QDSSRLHQAVLDYLASRPWVDHTRVGA 265 (411)
T ss_dssp SS-EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S--S-CCHHHHHHHHHHHHSTTEEEEEEEE
T ss_pred CCCCCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccccCCCC-cCHHHHHHHHHHHHhcCCccChhheEE
Confidence 3344677777777666655 55556778889999999999999999654322 234566777777777764 3459999
Q ss_pred EEEehhHHHHHHHHHhCCCccceEEEEeccCCCCCCChHHHHHHHHHhhcCCCCcccccccccccCCCCcccceeechhh
Q 025845 83 VGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREF 162 (247)
Q Consensus 83 vGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (247)
+|.|+||++|..+|..+++|++++|..++......... ...... ...++....+... ....+.+.
T Consensus 266 ~G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh~~ft~~-----~~~~~~---P~my~d~LA~rlG-------~~~~~~~~ 330 (411)
T PF06500_consen 266 WGFSFGGYYAVRLAALEDPRLKAVVALGAPVHHFFTDP-----EWQQRV---PDMYLDVLASRLG-------MAAVSDES 330 (411)
T ss_dssp EEETHHHHHHHHHHHHTTTT-SEEEEES---SCGGH-H-----HHHTTS----HHHHHHHHHHCT--------SCE-HHH
T ss_pred EEeccchHHHHHHHHhcccceeeEeeeCchHhhhhccH-----HHHhcC---CHHHHHHHHHHhC-------CccCCHHH
Confidence 99999999999999988999999999998633221111 000000 1111111111111 00111111
Q ss_pred HHHHHhcCCCcchhhh-hhhhhcccchhHHhhhhhhccchhHHHHHHHHHHHhhcCCcceeeecCCC-cc
Q 025845 163 LTIKIYQLCPPEVINL-LRITFIGRAIVLRQIVSYLYLDSDTMQIMLNFIIIIIITTHMSELINCSR-RA 230 (247)
Q Consensus 163 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~g~~D~~~p~~~~~~~~~~~~~~~~~~~i~~~g-H~ 230 (247)
+...+... .+ ...+.......++-+..+|++|.++|.+..+.++ ....+.+...|+... |.
T Consensus 331 l~~el~~~------SLk~qGlL~~rr~~~plL~i~~~~D~v~P~eD~~lia-~~s~~gk~~~~~~~~~~~ 393 (411)
T PF06500_consen 331 LRGELNKF------SLKTQGLLSGRRCPTPLLAINGEDDPVSPIEDSRLIA-ESSTDGKALRIPSKPLHM 393 (411)
T ss_dssp HHHHGGGG------STTTTTTTTSS-BSS-EEEEEETT-SSS-HHHHHHHH-HTBTT-EEEEE-SSSHHH
T ss_pred HHHHHHhc------CcchhccccCCCCCcceEEeecCCCCCCCHHHHHHHH-hcCCCCceeecCCCcccc
Confidence 11111111 11 1111112444555556668999999999999998 777778888888765 44
No 89
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.49 E-value=3.3e-13 Score=96.32 Aligned_cols=154 Identities=19% Similarity=0.181 Sum_probs=95.5
Q ss_pred EEEEcCCCCChh-hHHHHH-HHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCCcEEEEEEehhH
Q 025845 12 FVLVHGVNHGAW-CWYKLK-ARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGG 89 (247)
Q Consensus 12 iv~lhG~~~~~~-~~~~~~-~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~lvGhS~Gg 89 (247)
|+++||++++.. .|.+.. +.|... ++|-.+|+. .-+.++|.+.+.+.+... .++++|||||+|+
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~-~~V~~~~~~-----------~P~~~~W~~~l~~~i~~~--~~~~ilVaHSLGc 66 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENS-VRVEQPDWD-----------NPDLDEWVQALDQAIDAI--DEPTILVAHSLGC 66 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTS-EEEEEC--T-----------S--HHHHHHHHHHCCHC---TTTEEEEEETHHH
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCC-eEEeccccC-----------CCCHHHHHHHHHHHHhhc--CCCeEEEEeCHHH
Confidence 689999988754 576544 566544 777777761 137888999998888866 3579999999999
Q ss_pred HHHHHHH-HhCCCccceEEEEeccCCCCCCChHHHHHHHHHhhcCCCCcccccccccccCCCCcccceeechhhHHHHHh
Q 025845 90 VTLALAA-DKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFLTIKIY 168 (247)
Q Consensus 90 ~ia~~~a-~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (247)
..++.++ ...+.+|++++|++++.+. . . . .....+.....
T Consensus 67 ~~~l~~l~~~~~~~v~g~lLVAp~~~~---~------~---~---~~~~~~~~f~~------------------------ 107 (171)
T PF06821_consen 67 LTALRWLAEQSQKKVAGALLVAPFDPD---D------P---E---PFPPELDGFTP------------------------ 107 (171)
T ss_dssp HHHHHHHHHTCCSSEEEEEEES--SCG---C------H---H---CCTCGGCCCTT------------------------
T ss_pred HHHHHHHhhcccccccEEEEEcCCCcc---c------c---c---chhhhcccccc------------------------
Confidence 9999999 7778899999999997432 0 0 0 00000000000
Q ss_pred cCCCcchhhhhhhhhcccchhHHhhhhhhccchhHHHHHHHHHHHhhcCCcceeeecCCCcccccc
Q 025845 169 QLCPPEVINLLRITFIGRAIVLRQIVSYLYLDSDTMQIMLNFIIIIIITTHMSELINCSRRAFFLY 234 (247)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~D~~~p~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e 234 (247)
.... ...++..+..+++|.++|.+.++.++ +.+ ++++++++++||+---+
T Consensus 108 --~p~~------------~l~~~~~viaS~nDp~vp~~~a~~~A-~~l-~a~~~~~~~~GHf~~~~ 157 (171)
T PF06821_consen 108 --LPRD------------PLPFPSIVIASDNDPYVPFERAQRLA-QRL-GAELIILGGGGHFNAAS 157 (171)
T ss_dssp --SHCC------------HHHCCEEEEEETTBSSS-HHHHHHHH-HHH-T-EEEEETS-TTSSGGG
T ss_pred --Cccc------------ccCCCeEEEEcCCCCccCHHHHHHHH-HHc-CCCeEECCCCCCccccc
Confidence 0000 00011135567899999999999997 555 89999999999985433
No 90
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=99.46 E-value=1.9e-12 Score=99.34 Aligned_cols=113 Identities=15% Similarity=0.279 Sum_probs=96.6
Q ss_pred CcEEEEEcCCCCChhhHHHHHHHHHh---CCcEEEEecCCCCCCCCCc-----ccCccCHHHhHHHHHHHHHhC-C----
Q 025845 9 EKHFVLVHGVNHGAWCWYKLKARLVA---GGHRVTAVDLAASGINMKR-----IEDVHTFHAYSEPLMEVLASL-P---- 75 (247)
Q Consensus 9 ~~~iv~lhG~~~~~~~~~~~~~~l~~---~g~~vi~~D~~G~G~S~~~-----~~~~~~~~~~~~~l~~~i~~l-~---- 75 (247)
+..|||++|.+|-...|..+...|.+ ..+.|+++.+.||-.++.. ....+++++.++...++++++ .
T Consensus 2 ~~li~~IPGNPGlv~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~~ 81 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKNK 81 (266)
T ss_pred cEEEEEECCCCChHHHHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhcC
Confidence 45789999999999999999988874 3699999999999877765 345789999999999999887 2
Q ss_pred CCCcEEEEEEehhHHHHHHHHHhCC---CccceEEEEeccCCCCCCChH
Q 025845 76 AEEKVILVGHSLGGVTLALAADKFP---HKISVAVFVTAFMPDTTHRPS 121 (247)
Q Consensus 76 ~~~~~~lvGhS~Gg~ia~~~a~~~p---~~v~~lvl~~~~~~~~~~~~~ 121 (247)
...+++|+|||.|++++++++.+.+ .+|++++++-|.......+++
T Consensus 82 ~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~~ia~Sp~ 130 (266)
T PF10230_consen 82 PNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIEDIAKSPN 130 (266)
T ss_pred CCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCccccccCCch
Confidence 4578999999999999999999999 789999999997666655543
No 91
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.46 E-value=9.3e-13 Score=98.47 Aligned_cols=179 Identities=13% Similarity=0.067 Sum_probs=100.8
Q ss_pred cCCCCCCcEEEEEcCCCCChhhHHHHHH-HHHhCCcEEEEecCCC------CCC---CCC-----ccc---CccCHHHhH
Q 025845 3 EVVGMEEKHFVLVHGVNHGAWCWYKLKA-RLVAGGHRVTAVDLAA------SGI---NMK-----RIE---DVHTFHAYS 64 (247)
Q Consensus 3 ~~~~~~~~~iv~lhG~~~~~~~~~~~~~-~l~~~g~~vi~~D~~G------~G~---S~~-----~~~---~~~~~~~~~ 64 (247)
...+...+.|||+||+|.+...|..... .+...+.+++.++-|- .|. +-- ... ....+.+.+
T Consensus 8 ~~~~~~~~lvi~LHG~G~~~~~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~ 87 (216)
T PF02230_consen 8 EPKGKAKPLVILLHGYGDSEDLFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESA 87 (216)
T ss_dssp --SST-SEEEEEE--TTS-HHHHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHH
T ss_pred CCCCCCceEEEEECCCCCCcchhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHH
Confidence 3456778899999999999977776666 2232457777765542 222 110 000 112344445
Q ss_pred HHHHHHHHhC----CCCCcEEEEEEehhHHHHHHHHHhCCCccceEEEEeccCCCCCCChHHHHHHHHHhhcCCCCcccc
Q 025845 65 EPLMEVLASL----PAEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLD 140 (247)
Q Consensus 65 ~~l~~~i~~l----~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (247)
+.+.++|+.. -..++++|.|+|.||++|+.++.++|+.+.++|.+++..+....... .
T Consensus 88 ~~l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~~~~~--------~---------- 149 (216)
T PF02230_consen 88 ERLDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPESELED--------R---------- 149 (216)
T ss_dssp HHHHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGCCCHC--------C----------
T ss_pred HHHHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeeccccccccccc--------c----------
Confidence 5555555542 24579999999999999999999999999999999986432111000 0
Q ss_pred cccccccCCCCcccceeechhhHHHHHhcCCCcchhhhhhhhhcccchhHHhhhhhhccchhHHHHHHHHHHHhh----c
Q 025845 141 TQFSQCDASNPSHISMLFGREFLTIKIYQLCPPEVINLLRITFIGRAIVLRQIVSYLYLDSDTMQIMLNFIIIII----I 216 (247)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~D~~~p~~~~~~~~~~~----~ 216 (247)
. .... ..+..+.+|..|.++|.+.++... +. .
T Consensus 150 --------------~---------------------------~~~~--~~pi~~~hG~~D~vvp~~~~~~~~-~~L~~~~ 185 (216)
T PF02230_consen 150 --------------P---------------------------EALA--KTPILIIHGDEDPVVPFEWAEKTA-EFLKAAG 185 (216)
T ss_dssp --------------H---------------------------CCCC--TS-EEEEEETT-SSSTHHHHHHHH-HHHHCTT
T ss_pred --------------c---------------------------cccC--CCcEEEEecCCCCcccHHHHHHHH-HHHHhcC
Confidence 0 0000 233446779999999988776654 33 3
Q ss_pred CCcceeeecCCCccccccChhhHHHHH
Q 025845 217 TTHMSELINCSRRAFFLYHNTLFIQFV 243 (247)
Q Consensus 217 ~~~~~~~i~~~gH~~~~e~p~~~~~~v 243 (247)
.+.++..+++.||...-+.=+.+.+.|
T Consensus 186 ~~v~~~~~~g~gH~i~~~~~~~~~~~l 212 (216)
T PF02230_consen 186 ANVEFHEYPGGGHEISPEELRDLREFL 212 (216)
T ss_dssp -GEEEEEETT-SSS--HHHHHHHHHHH
T ss_pred CCEEEEEcCCCCCCCCHHHHHHHHHHH
Confidence 467889999999987644444444433
No 92
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.45 E-value=9e-12 Score=89.91 Aligned_cols=180 Identities=15% Similarity=0.141 Sum_probs=108.9
Q ss_pred EEEEcCCCCChhhHH--HHHHHHHhCC--cEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCCcEEEEEEeh
Q 025845 12 FVLVHGVNHGAWCWY--KLKARLVAGG--HRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSL 87 (247)
Q Consensus 12 iv~lhG~~~~~~~~~--~~~~~l~~~g--~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~lvGhS~ 87 (247)
|+++||+.++....+ .+.+.+.+.+ ..++++|++ .+.....+.+.++++.. ..+.+.|||.||
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~------------~~p~~a~~~l~~~i~~~-~~~~~~liGSSl 68 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLP------------PFPEEAIAQLEQLIEEL-KPENVVLIGSSL 68 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCC------------cCHHHHHHHHHHHHHhC-CCCCeEEEEECh
Confidence 799999999887754 4456666533 567777766 56778888999999998 666799999999
Q ss_pred hHHHHHHHHHhCCCccceEEEEeccCCCCCCChHHHHHHHHHhhcCCCCcccccccccccCCCCcccceeechhhHHHHH
Q 025845 88 GGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFLTIKI 167 (247)
Q Consensus 88 Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (247)
||+.|..+|.+++ +++ |+++|..... ..+..+.... ...+ ... ...+......+..
T Consensus 69 GG~~A~~La~~~~--~~a-vLiNPav~p~-----~~l~~~iG~~-----------~~~~--~~e---~~~~~~~~~~~l~ 124 (187)
T PF05728_consen 69 GGFYATYLAERYG--LPA-VLINPAVRPY-----ELLQDYIGEQ-----------TNPY--TGE---SYELTEEHIEELK 124 (187)
T ss_pred HHHHHHHHHHHhC--CCE-EEEcCCCCHH-----HHHHHhhCcc-----------ccCC--CCc---cceechHhhhhcc
Confidence 9999999999986 444 8888763211 1222222110 0000 000 1111111111110
Q ss_pred hcCCCcchhhhhhhhhc-ccchhHHhhhhhhccchhHHHHHHHHHHHhhcCCcceeeecCCCccccccChhhHHHHHHhh
Q 025845 168 YQLCPPEVINLLRITFI-GRAIVLRQIVSYLYLDSDTMQIMLNFIIIIIITTHMSELINCSRRAFFLYHNTLFIQFVYVL 246 (247)
Q Consensus 168 ~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~g~~D~~~p~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~v~~~ 246 (247)
.+.. ......+..+..++.|.+++...+. ....++..++.+|++|- +++=+++...|..+
T Consensus 125 -------------~l~~~~~~~~~~~lvll~~~DEvLd~~~a~----~~~~~~~~~i~~ggdH~--f~~f~~~l~~i~~f 185 (187)
T PF05728_consen 125 -------------ALEVPYPTNPERYLVLLQTGDEVLDYREAV----AKYRGCAQIIEEGGDHS--FQDFEEYLPQIIAF 185 (187)
T ss_pred -------------eEeccccCCCccEEEEEecCCcccCHHHHH----HHhcCceEEEEeCCCCC--CccHHHHHHHHHHh
Confidence 0000 0111223344557889988884443 44567778888999996 34556666666665
Q ss_pred C
Q 025845 247 C 247 (247)
Q Consensus 247 ~ 247 (247)
|
T Consensus 186 ~ 186 (187)
T PF05728_consen 186 L 186 (187)
T ss_pred h
Confidence 4
No 93
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.43 E-value=1.7e-12 Score=111.09 Aligned_cols=201 Identities=15% Similarity=0.036 Sum_probs=123.0
Q ss_pred cEEEEEcCCCCChh--hHHHHHHHHHhCCcEEEEecCCCCCCCCCc-------ccCccCHHHhHHHHHHHHHhCCCC--C
Q 025845 10 KHFVLVHGVNHGAW--CWYKLKARLVAGGHRVTAVDLAASGINMKR-------IEDVHTFHAYSEPLMEVLASLPAE--E 78 (247)
Q Consensus 10 ~~iv~lhG~~~~~~--~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~-------~~~~~~~~~~~~~l~~~i~~l~~~--~ 78 (247)
|.||++||.+.... .|....+.|+.+||.|+.+|+||.+.-... ......++++.+.+. .+.+.+.. +
T Consensus 395 P~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~F~~~~~~~~g~~~~~D~~~~~~-~l~~~~~~d~~ 473 (620)
T COG1506 395 PLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGYGREFADAIRGDWGGVDLEDLIAAVD-ALVKLPLVDPE 473 (620)
T ss_pred CEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCccHHHHHHhhhhccCCccHHHHHHHHH-HHHhCCCcChH
Confidence 89999999965433 477888899989999999999986542111 111235666666666 55555333 5
Q ss_pred cEEEEEEehhHHHHHHHHHhCCCccceEEEEeccCCCCCCChHHHHHHHHHhhcCCCCcccc-cccccccCCCCccccee
Q 025845 79 KVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLD-TQFSQCDASNPSHISML 157 (247)
Q Consensus 79 ~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 157 (247)
++.+.|||+||++++.++.+.| +.++.+...+........ ... ...+.. .... ...+ . .
T Consensus 474 ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~~~~~~~~--------~~~----~~~~~~~~~~~---~~~~---~-~ 533 (620)
T COG1506 474 RIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGGVDWLLYF--------GES----TEGLRFDPEEN---GGGP---P-E 533 (620)
T ss_pred HeEEeccChHHHHHHHHHhcCc-hhheEEeccCcchhhhhc--------ccc----chhhcCCHHHh---CCCc---c-c
Confidence 9999999999999999999888 677776555532211110 000 000000 0000 0000 0 0
Q ss_pred echhhHHHHHhcCCCcchhhhhhhhhcccchhHHhhhhhhccchhHHHHHHHHHHHh---hcCCcceeeecCCCccccc-
Q 025845 158 FGREFLTIKIYQLCPPEVINLLRITFIGRAIVLRQIVSYLYLDSDTMQIMLNFIIII---IITTHMSELINCSRRAFFL- 233 (247)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~D~~~p~~~~~~~~~~---~~~~~~~~~i~~~gH~~~~- 233 (247)
..+.......+....++..+.++.+|++|..+|.+.+..+... ....++++++|+.||.+--
T Consensus 534 --------------~~~~~~~~sp~~~~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~~ 599 (620)
T COG1506 534 --------------DREKYEDRSPIFYADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSRP 599 (620)
T ss_pred --------------ChHHHHhcChhhhhcccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCCc
Confidence 1111222333444556667788999999999998888776522 2346789999999998554
Q ss_pred cChhhHHHHHHh
Q 025845 234 YHNTLFIQFVYV 245 (247)
Q Consensus 234 e~p~~~~~~v~~ 245 (247)
++-....+.++.
T Consensus 600 ~~~~~~~~~~~~ 611 (620)
T COG1506 600 ENRVKVLKEILD 611 (620)
T ss_pred hhHHHHHHHHHH
Confidence 333444444443
No 94
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.43 E-value=3e-12 Score=105.41 Aligned_cols=105 Identities=12% Similarity=0.189 Sum_probs=85.8
Q ss_pred CCcEEEEEcCCCCChhhH-----HHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhC---CCCCc
Q 025845 8 EEKHFVLVHGVNHGAWCW-----YKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASL---PAEEK 79 (247)
Q Consensus 8 ~~~~iv~lhG~~~~~~~~-----~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l---~~~~~ 79 (247)
-++|||+++.+-.....| +.+++.|.++||+|+.+|+++-+.+. ...+++++++.+.+.++.. .+.++
T Consensus 214 ~~~PLLIVPp~INK~YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~----r~~~ldDYv~~i~~Ald~V~~~tG~~~ 289 (560)
T TIGR01839 214 HARPLLVVPPQINKFYIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAH----REWGLSTYVDALKEAVDAVRAITGSRD 289 (560)
T ss_pred CCCcEEEechhhhhhheeecCCcchHHHHHHHcCCeEEEEeCCCCChhh----cCCCHHHHHHHHHHHHHHHHHhcCCCC
Confidence 357999999999777777 58999999999999999999865443 2368888888777777665 46789
Q ss_pred EEEEEEehhHHHHHH----HHHhCCC-ccceEEEEeccCCCC
Q 025845 80 VILVGHSLGGVTLAL----AADKFPH-KISVAVFVTAFMPDT 116 (247)
Q Consensus 80 ~~lvGhS~Gg~ia~~----~a~~~p~-~v~~lvl~~~~~~~~ 116 (247)
++++|+|+||.++.. +++++++ +|++++++.+.....
T Consensus 290 vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf~ 331 (560)
T TIGR01839 290 LNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDST 331 (560)
T ss_pred eeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecccccC
Confidence 999999999998886 7788886 899999998865543
No 95
>PRK10162 acetyl esterase; Provisional
Probab=99.40 E-value=5.2e-12 Score=99.82 Aligned_cols=106 Identities=12% Similarity=0.072 Sum_probs=74.5
Q ss_pred CCcEEEEEcCCC---CChhhHHHHHHHHHh-CCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCC-CCCcEEE
Q 025845 8 EEKHFVLVHGVN---HGAWCWYKLKARLVA-GGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLP-AEEKVIL 82 (247)
Q Consensus 8 ~~~~iv~lhG~~---~~~~~~~~~~~~l~~-~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~-~~~~~~l 82 (247)
..|.||++||.+ ++...|..++..|++ .|+.|+.+|+|.......+.. ..+..+..+.+.+..+.++ +.+++++
T Consensus 80 ~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlape~~~p~~-~~D~~~a~~~l~~~~~~~~~d~~~i~l 158 (318)
T PRK10162 80 SQATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSPEARFPQA-IEEIVAVCCYFHQHAEDYGINMSRIGF 158 (318)
T ss_pred CCCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCCCCCCCCc-HHHHHHHHHHHHHhHHHhCCChhHEEE
Confidence 468899999976 677788889998876 589999999996543322211 1222333344444444552 3469999
Q ss_pred EEEehhHHHHHHHHHhC------CCccceEEEEeccCC
Q 025845 83 VGHSLGGVTLALAADKF------PHKISVAVFVTAFMP 114 (247)
Q Consensus 83 vGhS~Gg~ia~~~a~~~------p~~v~~lvl~~~~~~ 114 (247)
+|+|+||.+|+.++.+. +.+++++|++.+...
T Consensus 159 ~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~ 196 (318)
T PRK10162 159 AGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYG 196 (318)
T ss_pred EEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccC
Confidence 99999999999988743 357899999987543
No 96
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=99.40 E-value=3.2e-12 Score=118.80 Aligned_cols=103 Identities=15% Similarity=0.157 Sum_probs=89.1
Q ss_pred CCCcEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCCcEEEEEEe
Q 025845 7 MEEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHS 86 (247)
Q Consensus 7 ~~~~~iv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~lvGhS 86 (247)
+++++++++||++++...|..++..|. .+++|+++|+||+|.+... .++++++++++.+.++.+....+++++|||
T Consensus 1066 ~~~~~l~~lh~~~g~~~~~~~l~~~l~-~~~~v~~~~~~g~~~~~~~---~~~l~~la~~~~~~i~~~~~~~p~~l~G~S 1141 (1296)
T PRK10252 1066 GDGPTLFCFHPASGFAWQFSVLSRYLD-PQWSIYGIQSPRPDGPMQT---ATSLDEVCEAHLATLLEQQPHGPYHLLGYS 1141 (1296)
T ss_pred CCCCCeEEecCCCCchHHHHHHHHhcC-CCCcEEEEECCCCCCCCCC---CCCHHHHHHHHHHHHHhhCCCCCEEEEEec
Confidence 346899999999999999999999997 4699999999999866322 379999999999999987334689999999
Q ss_pred hhHHHHHHHHHh---CCCccceEEEEeccC
Q 025845 87 LGGVTLALAADK---FPHKISVAVFVTAFM 113 (247)
Q Consensus 87 ~Gg~ia~~~a~~---~p~~v~~lvl~~~~~ 113 (247)
|||.+|.++|.+ .++++..++++++..
T Consensus 1142 ~Gg~vA~e~A~~l~~~~~~v~~l~l~~~~~ 1171 (1296)
T PRK10252 1142 LGGTLAQGIAARLRARGEEVAFLGLLDTWP 1171 (1296)
T ss_pred hhhHHHHHHHHHHHHcCCceeEEEEecCCC
Confidence 999999999985 578899999998753
No 97
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.37 E-value=1.1e-11 Score=92.92 Aligned_cols=170 Identities=16% Similarity=0.013 Sum_probs=102.0
Q ss_pred CCCcEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEecCCCCCC-CCCc-ccC--cc------CHHHhHHHHHHHHHhC--
Q 025845 7 MEEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGI-NMKR-IED--VH------TFHAYSEPLMEVLASL-- 74 (247)
Q Consensus 7 ~~~~~iv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~-S~~~-~~~--~~------~~~~~~~~l~~~i~~l-- 74 (247)
++.|.||++|++.|-......+++.|+++||.|+++|+-+... .... ... .. ..+...+++.+.++.|
T Consensus 12 ~~~~~Vvv~~d~~G~~~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~ 91 (218)
T PF01738_consen 12 GPRPAVVVIHDIFGLNPNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVDYLRA 91 (218)
T ss_dssp SSEEEEEEE-BTTBS-HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHHHHHC
T ss_pred CCCCEEEEEcCCCCCchHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHh
Confidence 4678999999999888788899999999999999999854443 1111 110 00 1345566665555555
Q ss_pred -C--CCCcEEEEEEehhHHHHHHHHHhCCCccceEEEEeccCCCCCCChHHHHHHHHHhhcCCCCcccccccccccCCCC
Q 025845 75 -P--AEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNP 151 (247)
Q Consensus 75 -~--~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (247)
. ..+++.++|+|+||.+++.+|.+. +++++.|..-+. ...
T Consensus 92 ~~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg~-----~~~------------------------------- 134 (218)
T PF01738_consen 92 QPEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYGG-----SPP------------------------------- 134 (218)
T ss_dssp TTTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-S-----SSG-------------------------------
T ss_pred ccccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcCC-----CCC-------------------------------
Confidence 2 246999999999999999999876 567777754440 000
Q ss_pred cccceeechhhHHHHHhcCCCcchhhhhhhhhcccchhHHhhhhhhccchhHHHHHHHHHHH---hhcCCcceeeecCCC
Q 025845 152 SHISMLFGREFLTIKIYQLCPPEVINLLRITFIGRAIVLRQIVSYLYLDSDTMQIMLNFIII---IIITTHMSELINCSR 228 (247)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~D~~~p~~~~~~~~~---~~~~~~~~~~i~~~g 228 (247)
............+.++..|+.|..+|.+....+.. +.....++.++|+++
T Consensus 135 ---------------------------~~~~~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~y~ga~ 187 (218)
T PF01738_consen 135 ---------------------------PPPLEDAPKIKAPVLILFGENDPFFPPEEVEALEEALKAAGVDVEVHVYPGAG 187 (218)
T ss_dssp ---------------------------GGHHHHGGG--S-EEEEEETT-TTS-HHHHHHHHHHHHCTTTTEEEEEETT--
T ss_pred ---------------------------CcchhhhcccCCCEeecCccCCCCCChHHHHHHHHHHHhcCCcEEEEECCCCc
Confidence 00000011122233455678898888886555441 224678999999999
Q ss_pred ccccccChhhHH
Q 025845 229 RAFFLYHNTLFI 240 (247)
Q Consensus 229 H~~~~e~p~~~~ 240 (247)
|..+....+.+.
T Consensus 188 HgF~~~~~~~~~ 199 (218)
T PF01738_consen 188 HGFANPSRPPYD 199 (218)
T ss_dssp TTTTSTTSTT--
T ss_pred ccccCCCCcccC
Confidence 998877665443
No 98
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.33 E-value=2.1e-11 Score=91.84 Aligned_cols=101 Identities=16% Similarity=0.223 Sum_probs=88.7
Q ss_pred cEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCCcEEEEEEehhH
Q 025845 10 KHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGG 89 (247)
Q Consensus 10 ~~iv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~lvGhS~Gg 89 (247)
|||+++|+.+|...+|.++...|.. ...|+..+.||.|.-..+. -+++++++...+.|...+...+++|+|||+||
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l~~-~~~v~~l~a~g~~~~~~~~---~~l~~~a~~yv~~Ir~~QP~GPy~L~G~S~GG 76 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAALGP-LLPVYGLQAPGYGAGEQPF---ASLDDMAAAYVAAIRRVQPEGPYVLLGWSLGG 76 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHhcc-CceeeccccCccccccccc---CCHHHHHHHHHHHHHHhCCCCCEEEEeecccc
Confidence 6899999999999999999999985 4999999999998643333 59999999999999999666799999999999
Q ss_pred HHHHHHHHhC---CCccceEEEEeccCC
Q 025845 90 VTLALAADKF---PHKISVAVFVTAFMP 114 (247)
Q Consensus 90 ~ia~~~a~~~---p~~v~~lvl~~~~~~ 114 (247)
.+|..+|.+. .+.|..|+++++..+
T Consensus 77 ~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 77 AVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred HHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 9999999853 457999999999855
No 99
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.33 E-value=5.4e-11 Score=83.62 Aligned_cols=171 Identities=12% Similarity=-0.006 Sum_probs=109.3
Q ss_pred CCCcEEEEEcCCC---C--ChhhHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhC-CCCCcE
Q 025845 7 MEEKHFVLVHGVN---H--GAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASL-PAEEKV 80 (247)
Q Consensus 7 ~~~~~iv~lhG~~---~--~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l-~~~~~~ 80 (247)
.+.|..|.+|.-+ | +...-..++..|.++||.++.||+||-|+|.+.-+....-.+.+....+.+... ......
T Consensus 26 ~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~fD~GiGE~~Da~aaldW~~~~hp~s~~~ 105 (210)
T COG2945 26 PAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEFDNGIGELEDAAAALDWLQARHPDSASC 105 (210)
T ss_pred CCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCcccCCcchHHHHHHHHHHHHhhCCCchhh
Confidence 4556778888653 2 334467788889999999999999999999987765445555555555656555 222334
Q ss_pred EEEEEehhHHHHHHHHHhCCCccceEEEEeccCCCCCCChHHHHHHHHHhhcCCCCcccccccccccCCCCcccceeech
Q 025845 81 ILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGR 160 (247)
Q Consensus 81 ~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (247)
-|.|+|+|+.|++.+|.+.|+ ....+.+.+.. .. ..+ .+
T Consensus 106 ~l~GfSFGa~Ia~~la~r~~e-~~~~is~~p~~---~~------~df----------------s~--------------- 144 (210)
T COG2945 106 WLAGFSFGAYIAMQLAMRRPE-ILVFISILPPI---NA------YDF----------------SF--------------- 144 (210)
T ss_pred hhcccchHHHHHHHHHHhccc-ccceeeccCCC---Cc------hhh----------------hh---------------
Confidence 688999999999999999876 33333222221 10 000 00
Q ss_pred hhHHHHHhcCCCcchhhhhhhhhcccchhHHhhhhhhccchhHHHHHHHHHHHhhcCCcceeeecCCCccccccChhhHH
Q 025845 161 EFLTIKIYQLCPPEVINLLRITFIGRAIVLRQIVSYLYLDSDTMQIMLNFIIIIIITTHMSELINCSRRAFFLYHNTLFI 240 (247)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~D~~~p~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~ 240 (247)
......+..+.+|+.|.+++....-.++ +. ...++++++++.||.+ .+-..+.
T Consensus 145 ------------------------l~P~P~~~lvi~g~~Ddvv~l~~~l~~~-~~-~~~~~i~i~~a~HFF~-gKl~~l~ 197 (210)
T COG2945 145 ------------------------LAPCPSPGLVIQGDADDVVDLVAVLKWQ-ES-IKITVITIPGADHFFH-GKLIELR 197 (210)
T ss_pred ------------------------ccCCCCCceeEecChhhhhcHHHHHHhh-cC-CCCceEEecCCCceec-ccHHHHH
Confidence 0011122335567777777777666665 44 6678999999999955 4445566
Q ss_pred HHHHh
Q 025845 241 QFVYV 245 (247)
Q Consensus 241 ~~v~~ 245 (247)
+.+.+
T Consensus 198 ~~i~~ 202 (210)
T COG2945 198 DTIAD 202 (210)
T ss_pred HHHHH
Confidence 65543
No 100
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=99.29 E-value=9.5e-11 Score=90.80 Aligned_cols=224 Identities=15% Similarity=0.112 Sum_probs=125.7
Q ss_pred CCCcEEEEEcCCCCChhhHH--HH-HHHHHhCCcEEEEecCCCCCCCCCcccC---ccCHHHh-------H---HHHHHH
Q 025845 7 MEEKHFVLVHGVNHGAWCWY--KL-KARLVAGGHRVTAVDLAASGINMKRIED---VHTFHAY-------S---EPLMEV 70 (247)
Q Consensus 7 ~~~~~iv~lhG~~~~~~~~~--~~-~~~l~~~g~~vi~~D~~G~G~S~~~~~~---~~~~~~~-------~---~~l~~~ 70 (247)
+.+|..|.++|.|. ...|. .+ +..|.++|+..+.+..|-||.-.+..+. ..++.++ + ..+...
T Consensus 90 ~~rp~~IhLagTGD-h~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll~W 168 (348)
T PF09752_consen 90 PYRPVCIHLAGTGD-HGFWRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRALLHW 168 (348)
T ss_pred CCCceEEEecCCCc-cchhhhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHHHHH
Confidence 45788888888655 55553 33 7778778999999999999977654431 1233332 2 223333
Q ss_pred HHhCCCCCcEEEEEEehhHHHHHHHHHhCCCccceEEEEeccCCCCCCChHH-----HHHHHHHhhcCCCCccccccccc
Q 025845 71 LASLPAEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSF-----VLEQYSEKMGKEDDSWLDTQFSQ 145 (247)
Q Consensus 71 i~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 145 (247)
++.. +..++.+.|.||||.+|...|...|..|..+-++++........... -...+.+.+ ....+.+. ...
T Consensus 169 l~~~-G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~sAs~vFt~Gvls~~i~W~~L~~q~--~~~~~~~~-~~~ 244 (348)
T PF09752_consen 169 LERE-GYGPLGLTGISMGGHMAALAASNWPRPVALVPCLSWSSASVVFTEGVLSNSINWDALEKQF--EDTVYEEE-ISD 244 (348)
T ss_pred HHhc-CCCceEEEEechhHhhHHhhhhcCCCceeEEEeecccCCCcchhhhhhhcCCCHHHHHHHh--cccchhhh-hcc
Confidence 3444 77899999999999999999999998877776776643322211110 011111111 00000000 000
Q ss_pred ccCCCCcccceeechhhHHHHHhcCCCcchhhhhhh----hhcccchhHHh-----hhhhhccchhHHHHHHHHHHHhhc
Q 025845 146 CDASNPSHISMLFGREFLTIKIYQLCPPEVINLLRI----TFIGRAIVLRQ-----IVSYLYLDSDTMQIMLNFIIIIII 216 (247)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~-----~l~~g~~D~~~p~~~~~~~~~~~~ 216 (247)
.... . ........-......+....... .....++..+. .+...++|..+|......+. +.+
T Consensus 245 ~~~~-------~-~~~~~~~~~~~~~~~Ea~~~m~~~md~~T~l~nf~~P~dp~~ii~V~A~~DaYVPr~~v~~Lq-~~W 315 (348)
T PF09752_consen 245 IPAQ-------N-KSLPLDSMEERRRDREALRFMRGVMDSFTHLTNFPVPVDPSAIIFVAAKNDAYVPRHGVLSLQ-EIW 315 (348)
T ss_pred cccC-------c-ccccchhhccccchHHHHHHHHHHHHhhccccccCCCCCCCcEEEEEecCceEechhhcchHH-HhC
Confidence 0000 0 00000000000000011000000 00111111111 12227999999999888999 999
Q ss_pred CCcceeeecCCCcc-ccccChhhHHHHHHh
Q 025845 217 TTHMSELINCSRRA-FFLYHNTLFIQFVYV 245 (247)
Q Consensus 217 ~~~~~~~i~~~gH~-~~~e~p~~~~~~v~~ 245 (247)
|++++..+++ ||. .++-+.+.|.++|++
T Consensus 316 PGsEvR~l~g-GHVsA~L~~q~~fR~AI~D 344 (348)
T PF09752_consen 316 PGSEVRYLPG-GHVSAYLLHQEAFRQAIYD 344 (348)
T ss_pred CCCeEEEecC-CcEEEeeechHHHHHHHHH
Confidence 9999999987 999 788999999999976
No 101
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=99.26 E-value=8.7e-12 Score=91.93 Aligned_cols=89 Identities=25% Similarity=0.292 Sum_probs=55.0
Q ss_pred CcEEEEEcCCCC-ChhhHHHHHHHHHhCCcE---EEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhC---CCCCcEE
Q 025845 9 EKHFVLVHGVNH-GAWCWYKLKARLVAGGHR---VTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASL---PAEEKVI 81 (247)
Q Consensus 9 ~~~iv~lhG~~~-~~~~~~~~~~~l~~~g~~---vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l---~~~~~~~ 81 (247)
+.||||+||.++ ....|..+++.|.++||. ++++++-....+...... ....+.++++.++++.. .+. +|.
T Consensus 1 ~~PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~-~~~~~~~~~l~~fI~~Vl~~TGa-kVD 78 (219)
T PF01674_consen 1 NRPVVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGSPSVQNA-HMSCESAKQLRAFIDAVLAYTGA-KVD 78 (219)
T ss_dssp S--EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHHTHHHHH-HB-HHHHHHHHHHHHHHHHHHT---EE
T ss_pred CCCEEEECCCCcchhhCHHHHHHHHHHcCCCcceeEeccCCCCCCCCccccc-ccchhhHHHHHHHHHHHHHhhCC-EEE
Confidence 359999999998 567899999999999998 899998544432222211 11233345555555544 266 999
Q ss_pred EEEEehhHHHHHHHHHhC
Q 025845 82 LVGHSLGGVTLALAADKF 99 (247)
Q Consensus 82 lvGhS~Gg~ia~~~a~~~ 99 (247)
||||||||.++..+....
T Consensus 79 IVgHS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 79 IVGHSMGGTIARYYIKGG 96 (219)
T ss_dssp EEEETCHHHHHHHHHHHC
T ss_pred EEEcCCcCHHHHHHHHHc
Confidence 999999999999998744
No 102
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=99.25 E-value=3.1e-11 Score=98.16 Aligned_cols=91 Identities=15% Similarity=0.247 Sum_probs=70.3
Q ss_pred CChhhHHHHHHHHHhCCcEEEEecCCCCCCCCCcccC-ccCHHHhHHHHHHHHHhCCCCCcEEEEEEehhHHHHHHHHHh
Q 025845 20 HGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIED-VHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGVTLALAADK 98 (247)
Q Consensus 20 ~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~-~~~~~~~~~~l~~~i~~l~~~~~~~lvGhS~Gg~ia~~~a~~ 98 (247)
.....|..+++.|.+.||.+ ..|++|+|.+...... ...++++.+.+.++.+.. +.++++||||||||.+++.++..
T Consensus 105 ~~~~~~~~li~~L~~~GY~~-~~dL~g~gYDwR~~~~~~~~~~~Lk~lIe~~~~~~-g~~kV~LVGHSMGGlva~~fl~~ 182 (440)
T PLN02733 105 DEVYYFHDMIEQLIKWGYKE-GKTLFGFGYDFRQSNRLPETMDGLKKKLETVYKAS-GGKKVNIISHSMGGLLVKCFMSL 182 (440)
T ss_pred chHHHHHHHHHHHHHcCCcc-CCCcccCCCCccccccHHHHHHHHHHHHHHHHHHc-CCCCEEEEEECHhHHHHHHHHHH
Confidence 45678999999999988755 8999999998765321 123445555555555555 67899999999999999999998
Q ss_pred CCCc----cceEEEEecc
Q 025845 99 FPHK----ISVAVFVTAF 112 (247)
Q Consensus 99 ~p~~----v~~lvl~~~~ 112 (247)
+|+. |+++|.++++
T Consensus 183 ~p~~~~k~I~~~I~la~P 200 (440)
T PLN02733 183 HSDVFEKYVNSWIAIAAP 200 (440)
T ss_pred CCHhHHhHhccEEEECCC
Confidence 8863 7899999875
No 103
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.24 E-value=1.1e-09 Score=86.17 Aligned_cols=198 Identities=17% Similarity=0.098 Sum_probs=98.6
Q ss_pred CCCCcEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEecCCCCCCCCCcc-------------------cCccCHHHhHHH
Q 025845 6 GMEEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRI-------------------EDVHTFHAYSEP 66 (247)
Q Consensus 6 ~~~~~~iv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~-------------------~~~~~~~~~~~~ 66 (247)
.++-|.||.+||.++....|...+. ++..||-|+.+|.||.|...... .+.+-+.....|
T Consensus 80 ~~~~Pavv~~hGyg~~~~~~~~~~~-~a~~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D 158 (320)
T PF05448_consen 80 KGKLPAVVQFHGYGGRSGDPFDLLP-WAAAGYAVLAMDVRGQGGRSPDYRGSSGGTLKGHITRGIDDNPEDYYYRRVYLD 158 (320)
T ss_dssp SSSEEEEEEE--TT--GGGHHHHHH-HHHTT-EEEEE--TTTSSSS-B-SSBSSS-SSSSTTTTTTS-TTT-HHHHHHHH
T ss_pred CCCcCEEEEecCCCCCCCCcccccc-cccCCeEEEEecCCCCCCCCCCccccCCCCCccHHhcCccCchHHHHHHHHHHH
Confidence 3556899999999999888876655 44589999999999999332111 001112223344
Q ss_pred HH---HHHHhCC--CCCcEEEEEEehhHHHHHHHHHhCCCccceEEEEeccCCCCCCChHHHHHHHHHhhcCCCCccc--
Q 025845 67 LM---EVLASLP--AEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWL-- 139 (247)
Q Consensus 67 l~---~~i~~l~--~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 139 (247)
.. +++..++ +.+++.+.|.|.||.+++.+|...| +|++++..-|+... ....+.... ....+.
T Consensus 159 ~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~-rv~~~~~~vP~l~d-------~~~~~~~~~--~~~~y~~~ 228 (320)
T PF05448_consen 159 AVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP-RVKAAAADVPFLCD-------FRRALELRA--DEGPYPEI 228 (320)
T ss_dssp HHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS-T-SEEEEESESSSS-------HHHHHHHT----STTTHHH
T ss_pred HHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc-cccEEEecCCCccc-------hhhhhhcCC--ccccHHHH
Confidence 43 3444443 3479999999999999999998775 69999987775321 111111110 000000
Q ss_pred ccccccccCCCCcccceeechhhHHHHHhcCCCcchhhhhhhhhcccchhHHhhhhhhccchhHHHHHHHHHHHhhcC-C
Q 025845 140 DTQFSQCDASNPSHISMLFGREFLTIKIYQLCPPEVINLLRITFIGRAIVLRQIVSYLYLDSDTMQIMLNFIIIIIIT-T 218 (247)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~D~~~p~~~~~~~~~~~~~-~ 218 (247)
...+.. .. ...+...+.+......+..+. ...+..+..+.-|-.|.++|+...-... ..++ .
T Consensus 229 ~~~~~~---~d-------~~~~~~~~v~~~L~Y~D~~nf------A~ri~~pvl~~~gl~D~~cPP~t~fA~y-N~i~~~ 291 (320)
T PF05448_consen 229 RRYFRW---RD-------PHHEREPEVFETLSYFDAVNF------ARRIKCPVLFSVGLQDPVCPPSTQFAAY-NAIPGP 291 (320)
T ss_dssp HHHHHH---HS-------CTHCHHHHHHHHHHTT-HHHH------GGG--SEEEEEEETT-SSS-HHHHHHHH-CC--SS
T ss_pred HHHHhc---cC-------CCcccHHHHHHHHhhhhHHHH------HHHcCCCEEEEEecCCCCCCchhHHHHH-hccCCC
Confidence 000000 00 000011111111111111122 2223334444458899999999998887 5554 5
Q ss_pred cceeeecCCCccc
Q 025845 219 HMSELINCSRRAF 231 (247)
Q Consensus 219 ~~~~~i~~~gH~~ 231 (247)
.++.++|..||..
T Consensus 292 K~l~vyp~~~He~ 304 (320)
T PF05448_consen 292 KELVVYPEYGHEY 304 (320)
T ss_dssp EEEEEETT--SST
T ss_pred eeEEeccCcCCCc
Confidence 7899999999953
No 104
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=99.23 E-value=2.1e-10 Score=91.96 Aligned_cols=103 Identities=12% Similarity=0.115 Sum_probs=83.6
Q ss_pred cEEEEEcCCCCChhhH-HHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCCcEEEEEEehh
Q 025845 10 KHFVLVHGVNHGAWCW-YKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLG 88 (247)
Q Consensus 10 ~~iv~lhG~~~~~~~~-~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~lvGhS~G 88 (247)
|||+++..+.+..... +.+++.|.+ |+.|+..|+.--+..+.... ..+++++++-+.+.++++ +.+ ++++|+|+|
T Consensus 103 ~pvLiV~Pl~g~~~~L~RS~V~~Ll~-g~dVYl~DW~~p~~vp~~~~-~f~ldDYi~~l~~~i~~~-G~~-v~l~GvCqg 178 (406)
T TIGR01849 103 PAVLIVAPMSGHYATLLRSTVEALLP-DHDVYITDWVNARMVPLSAG-KFDLEDYIDYLIEFIRFL-GPD-IHVIAVCQP 178 (406)
T ss_pred CcEEEEcCCchHHHHHHHHHHHHHhC-CCcEEEEeCCCCCCCchhcC-CCCHHHHHHHHHHHHHHh-CCC-CcEEEEchh
Confidence 7999999998766554 688899996 99999999987775543332 479999999999999999 666 999999999
Q ss_pred HHHHHHHHHhC-----CCccceEEEEeccCCCC
Q 025845 89 GVTLALAADKF-----PHKISVAVFVTAFMPDT 116 (247)
Q Consensus 89 g~ia~~~a~~~-----p~~v~~lvl~~~~~~~~ 116 (247)
|..++.+++.. |++++++++++++....
T Consensus 179 G~~~laa~Al~a~~~~p~~~~sltlm~~PID~~ 211 (406)
T TIGR01849 179 AVPVLAAVALMAENEPPAQPRSMTLMGGPIDAR 211 (406)
T ss_pred hHHHHHHHHHHHhcCCCCCcceEEEEecCccCC
Confidence 99876665543 67899999999976544
No 105
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.23 E-value=1.8e-10 Score=85.86 Aligned_cols=99 Identities=19% Similarity=0.242 Sum_probs=62.5
Q ss_pred EEEEcCCCC---ChhhHHHHHHHHHh-CCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHh-----CCCCCcEEE
Q 025845 12 FVLVHGVNH---GAWCWYKLKARLVA-GGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLAS-----LPAEEKVIL 82 (247)
Q Consensus 12 iv~lhG~~~---~~~~~~~~~~~l~~-~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~-----l~~~~~~~l 82 (247)
||++||.+- +......++..+++ .|+.|+.+|+|=.-.. .....+++..+-+..+++. . +.++++|
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~p~~----~~p~~~~D~~~a~~~l~~~~~~~~~-d~~~i~l 75 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLAPEA----PFPAALEDVKAAYRWLLKNADKLGI-DPERIVL 75 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---TTTS----STTHHHHHHHHHHHHHHHTHHHHTE-EEEEEEE
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeeccccccc----cccccccccccceeeeccccccccc-cccceEE
Confidence 799999863 44445566666664 7999999999943111 1112334444444444444 3 5679999
Q ss_pred EEEehhHHHHHHHHHhCCC----ccceEEEEeccCCC
Q 025845 83 VGHSLGGVTLALAADKFPH----KISVAVFVTAFMPD 115 (247)
Q Consensus 83 vGhS~Gg~ia~~~a~~~p~----~v~~lvl~~~~~~~ 115 (247)
+|+|-||.+|+.++.+..+ .+++++++++....
T Consensus 76 ~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 76 IGDSAGGHLALSLALRARDRGLPKPKGIILISPWTDL 112 (211)
T ss_dssp EEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSST
T ss_pred eecccccchhhhhhhhhhhhcccchhhhhcccccccc
Confidence 9999999999999875432 48999999996433
No 106
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.21 E-value=1.2e-10 Score=87.35 Aligned_cols=106 Identities=22% Similarity=0.159 Sum_probs=75.7
Q ss_pred CCCcEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHH-HhC-----CCCCcE
Q 025845 7 MEEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVL-ASL-----PAEEKV 80 (247)
Q Consensus 7 ~~~~~iv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i-~~l-----~~~~~~ 80 (247)
++=|.|||+||+......|..+.+.++..||-|+++|+...+...... +..+..+.++.+.+=+ ..+ .+..++
T Consensus 15 g~yPVv~f~~G~~~~~s~Ys~ll~hvAShGyIVV~~d~~~~~~~~~~~-~~~~~~~vi~Wl~~~L~~~l~~~v~~D~s~l 93 (259)
T PF12740_consen 15 GTYPVVLFLHGFLLINSWYSQLLEHVASHGYIVVAPDLYSIGGPDDTD-EVASAAEVIDWLAKGLESKLPLGVKPDFSKL 93 (259)
T ss_pred CCcCEEEEeCCcCCCHHHHHHHHHHHHhCceEEEEecccccCCCCcch-hHHHHHHHHHHHHhcchhhccccccccccce
Confidence 345899999999987778899999999999999999976644321111 1112333333332211 111 155799
Q ss_pred EEEEEehhHHHHHHHHHhC-----CCccceEEEEeccC
Q 025845 81 ILVGHSLGGVTLALAADKF-----PHKISVAVFVTAFM 113 (247)
Q Consensus 81 ~lvGhS~Gg~ia~~~a~~~-----p~~v~~lvl~~~~~ 113 (247)
.|.|||-||-+|..++... +.+++++|+++|..
T Consensus 94 ~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 94 ALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVD 131 (259)
T ss_pred EEeeeCCCCHHHHHHHhhhcccccccceeEEEEecccc
Confidence 9999999999999999877 56899999999963
No 107
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=99.20 E-value=4.5e-11 Score=94.11 Aligned_cols=113 Identities=21% Similarity=0.265 Sum_probs=70.5
Q ss_pred CCCCcEEEEEcCCCCCh--hhH-HHHHHHH-Hh--CCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhC-----
Q 025845 6 GMEEKHFVLVHGVNHGA--WCW-YKLKARL-VA--GGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASL----- 74 (247)
Q Consensus 6 ~~~~~~iv~lhG~~~~~--~~~-~~~~~~l-~~--~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l----- 74 (247)
+.++|++|++|||.++. ..| ..+...+ .. .++.||++||.......-. ..........+.+..+|..|
T Consensus 68 n~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~~Y~-~a~~n~~~vg~~la~~l~~L~~~~g 146 (331)
T PF00151_consen 68 NPSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASNNYP-QAVANTRLVGRQLAKFLSFLINNFG 146 (331)
T ss_dssp -TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS-HH-HHHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred CCCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhcccccc-chhhhHHHHHHHHHHHHHHHHhhcC
Confidence 46789999999998877 345 4555544 43 4799999999643221100 01123344445555555444
Q ss_pred CCCCcEEEEEEehhHHHHHHHHHhCCC--ccceEEEEeccCCCCCCC
Q 025845 75 PAEEKVILVGHSLGGVTLALAADKFPH--KISVAVFVTAFMPDTTHR 119 (247)
Q Consensus 75 ~~~~~~~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~~~~~~ 119 (247)
-..++++|||||+||.+|-.++.+... +|.+++.++|..|.....
T Consensus 147 ~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP~F~~~ 193 (331)
T PF00151_consen 147 VPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGPLFENN 193 (331)
T ss_dssp --GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-TTTTTS
T ss_pred CChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCcccccccCC
Confidence 156899999999999999999998877 899999999987766543
No 108
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.19 E-value=3.9e-10 Score=86.15 Aligned_cols=102 Identities=18% Similarity=0.252 Sum_probs=68.9
Q ss_pred CCcEEEEEcCCCCCh---hhHHHHHHHHHhCCcEEEEecCC----CCCCCCCcccCccCHHHhHHHHHHHHHhCC-----
Q 025845 8 EEKHFVLVHGVNHGA---WCWYKLKARLVAGGHRVTAVDLA----ASGINMKRIEDVHTFHAYSEPLMEVLASLP----- 75 (247)
Q Consensus 8 ~~~~iv~lhG~~~~~---~~~~~~~~~l~~~g~~vi~~D~~----G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~----- 75 (247)
....||||.|++... .+...+++.|.+.+|.|+-+-++ |+|. .++++.++||.+++++|.
T Consensus 32 ~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~--------~SL~~D~~eI~~~v~ylr~~~~g 103 (303)
T PF08538_consen 32 APNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGT--------SSLDRDVEEIAQLVEYLRSEKGG 103 (303)
T ss_dssp SSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S----------HHHHHHHHHHHHHHHHHHS--
T ss_pred CCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCc--------chhhhHHHHHHHHHHHHHHhhcc
Confidence 455899999998644 44788999997778999999875 4542 488888888888888771
Q ss_pred --CCCcEEEEEEehhHHHHHHHHHhCC-----CccceEEEEeccCCCCC
Q 025845 76 --AEEKVILVGHSLGGVTLALAADKFP-----HKISVAVFVTAFMPDTT 117 (247)
Q Consensus 76 --~~~~~~lvGhS~Gg~ia~~~a~~~p-----~~v~~lvl~~~~~~~~~ 117 (247)
+.++++|+|||.|+.-+++|+.+.. ..|++.||-+|..+...
T Consensus 104 ~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa 152 (303)
T PF08538_consen 104 HFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREA 152 (303)
T ss_dssp ----S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTS
T ss_pred ccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhH
Confidence 3579999999999999999988642 57999999999655443
No 109
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=99.15 E-value=2.1e-10 Score=86.75 Aligned_cols=109 Identities=22% Similarity=0.307 Sum_probs=71.6
Q ss_pred CCCcEEEEEcCCCCChhhHHHHHHHHH-hCCc--EEE--EecCCCC----CCCC----Ccc------cCc-cCHHHhHHH
Q 025845 7 MEEKHFVLVHGVNHGAWCWYKLKARLV-AGGH--RVT--AVDLAAS----GINM----KRI------EDV-HTFHAYSEP 66 (247)
Q Consensus 7 ~~~~~iv~lhG~~~~~~~~~~~~~~l~-~~g~--~vi--~~D~~G~----G~S~----~~~------~~~-~~~~~~~~~ 66 (247)
.+..|.||+||++++...+..++..+. +.|. .++ .++--|. |.=. .|- ... -++...++.
T Consensus 9 ~~~tPTifihG~~gt~~s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~w 88 (255)
T PF06028_consen 9 QSTTPTIFIHGYGGTANSFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAKW 88 (255)
T ss_dssp -S-EEEEEE--TTGGCCCCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHHH
T ss_pred cCCCcEEEECCCCCChhHHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHHH
Confidence 456799999999999999999999997 6553 333 3444442 2111 110 111 257777888
Q ss_pred HHHHHHhC---CCCCcEEEEEEehhHHHHHHHHHhCCC-----ccceEEEEeccCCC
Q 025845 67 LMEVLASL---PAEEKVILVGHSLGGVTLALAADKFPH-----KISVAVFVTAFMPD 115 (247)
Q Consensus 67 l~~~i~~l---~~~~~~~lvGhS~Gg~ia~~~a~~~p~-----~v~~lvl~~~~~~~ 115 (247)
+..+|..| .+.+++.+|||||||..++.|+..+.. ++.++|.++++...
T Consensus 89 l~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng 145 (255)
T PF06028_consen 89 LKKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNG 145 (255)
T ss_dssp HHHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTT
T ss_pred HHHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCc
Confidence 88777776 578999999999999999999887532 58999999986443
No 110
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.15 E-value=2e-10 Score=83.11 Aligned_cols=228 Identities=11% Similarity=0.028 Sum_probs=117.9
Q ss_pred EEEEEcCCCCChhhHHHHHHHHHhCCcEEEEecCCCCCCCCCcccC--ccCHHHhH-----HHHHHHHHhCCCCCcEEEE
Q 025845 11 HFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIED--VHTFHAYS-----EPLMEVLASLPAEEKVILV 83 (247)
Q Consensus 11 ~iv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~--~~~~~~~~-----~~l~~~i~~l~~~~~~~lv 83 (247)
.|+.-.+.+.....+++++..++++||.|..+|+||.|.|+..... .+++.+++ ..|..+-+.+ ...+...|
T Consensus 32 ~~~va~a~Gv~~~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~DwA~~D~~aal~~~~~~~-~~~P~y~v 110 (281)
T COG4757 32 RLVVAGATGVGQYFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQWRYLDWARLDFPAALAALKKAL-PGHPLYFV 110 (281)
T ss_pred cEEecccCCcchhHhHHHHHHhhccCceEEEEecccccCCCccccccCccchhhhhhcchHHHHHHHHhhC-CCCceEEe
Confidence 4555555566666789999999999999999999999999876532 35565554 3333333444 56799999
Q ss_pred EEehhHHHHHHHHHhCCCccceEEEEeccCCCCCCChH-HHHHHHHH-hhcCCCCcccccccccccCCCCcccceeechh
Q 025845 84 GHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPS-FVLEQYSE-KMGKEDDSWLDTQFSQCDASNPSHISMLFGRE 161 (247)
Q Consensus 84 GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (247)
|||+||.+.-.+. +++ ++......++..-..+.... ..+..+.- .+....-.++..... .+-+.......-.
T Consensus 111 gHS~GGqa~gL~~-~~~-k~~a~~vfG~gagwsg~m~~~~~l~~~~l~~lv~p~lt~w~g~~p----~~l~G~G~d~p~~ 184 (281)
T COG4757 111 GHSFGGQALGLLG-QHP-KYAAFAVFGSGAGWSGWMGLRERLGAVLLWNLVGPPLTFWKGYMP----KDLLGLGSDLPGT 184 (281)
T ss_pred eccccceeecccc-cCc-ccceeeEeccccccccchhhhhcccceeeccccccchhhccccCc----HhhcCCCccCcch
Confidence 9999998655554 344 45554444443222221111 00000000 000000011100000 0000000111112
Q ss_pred hHHHH---HhcCCC-cchhhhhhhhhcccchhHHhhhhhhccchhHHHHHHHHHHHhhcCCcceee--ecC----CCccc
Q 025845 162 FLTIK---IYQLCP-PEVINLLRITFIGRAIVLRQIVSYLYLDSDTMQIMLNFIIIIIITTHMSEL--INC----SRRAF 231 (247)
Q Consensus 162 ~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~g~~D~~~p~~~~~~~~~~~~~~~~~~~--i~~----~gH~~ 231 (247)
.++++ +.+... ................+++-......+|..+|+.....+. .-.+|+.+.. ++. -||+-
T Consensus 185 v~RdW~RwcR~p~y~fddp~~~~~~q~yaaVrtPi~~~~~~DD~w~P~As~d~f~-~~y~nApl~~~~~~~~~~~lGH~g 263 (281)
T COG4757 185 VMRDWARWCRHPRYYFDDPAMRNYRQVYAAVRTPITFSRALDDPWAPPASRDAFA-SFYRNAPLEMRDLPRAEGPLGHMG 263 (281)
T ss_pred HHHHHHHHhcCccccccChhHhHHHHHHHHhcCceeeeccCCCCcCCHHHHHHHH-HhhhcCcccceecCcccCcccchh
Confidence 22222 111100 0000000001111122222223336889999999988887 7777776543 333 59999
Q ss_pred cccCh-hhHHHHHHhh
Q 025845 232 FLYHN-TLFIQFVYVL 246 (247)
Q Consensus 232 ~~e~p-~~~~~~v~~~ 246 (247)
++-+| |...+.++.+
T Consensus 264 yfR~~~Ealwk~~L~w 279 (281)
T COG4757 264 YFREPFEALWKEMLGW 279 (281)
T ss_pred hhccchHHHHHHHHHh
Confidence 99998 7777777654
No 111
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=99.14 E-value=2.3e-09 Score=78.42 Aligned_cols=208 Identities=13% Similarity=0.042 Sum_probs=110.3
Q ss_pred CcEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEecCCCC-CCCCCcccCccCHHHhHHHHHHHHHhC--CCCCcEEEEEE
Q 025845 9 EKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAAS-GINMKRIEDVHTFHAYSEPLMEVLASL--PAEEKVILVGH 85 (247)
Q Consensus 9 ~~~iv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~-G~S~~~~~~~~~~~~~~~~l~~~i~~l--~~~~~~~lvGh 85 (247)
.++||+.+|++.....|..++.+|+..||+|+.+|-..| |.|++.-.+ ++++...+++..+++.+ .+..++-||.-
T Consensus 30 ~~tiliA~Gf~rrmdh~agLA~YL~~NGFhViRyDsl~HvGlSsG~I~e-ftms~g~~sL~~V~dwl~~~g~~~~GLIAa 108 (294)
T PF02273_consen 30 NNTILIAPGFARRMDHFAGLAEYLSANGFHVIRYDSLNHVGLSSGDINE-FTMSIGKASLLTVIDWLATRGIRRIGLIAA 108 (294)
T ss_dssp S-EEEEE-TT-GGGGGGHHHHHHHHTTT--EEEE---B--------------HHHHHHHHHHHHHHHHHTT---EEEEEE
T ss_pred CCeEEEecchhHHHHHHHHHHHHHhhCCeEEEeccccccccCCCCChhh-cchHHhHHHHHHHHHHHHhcCCCcchhhhh
Confidence 479999999999999999999999999999999998765 888877654 79999999988888777 47789999999
Q ss_pred ehhHHHHHHHHHhCCCccceEEEEeccCCCCCCChHHHHHHHHHhhcCCCCcccccccccccCCCCcccceeechhhHHH
Q 025845 86 SLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFLTI 165 (247)
Q Consensus 86 S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (247)
|+.|-+|+..|.+- .+.-+|..-+.. .....+.+.+ ..++++........+..+-....-...++.+
T Consensus 109 SLSaRIAy~Va~~i--~lsfLitaVGVV--------nlr~TLe~al---~~Dyl~~~i~~lp~dldfeGh~l~~~vFv~d 175 (294)
T PF02273_consen 109 SLSARIAYEVAADI--NLSFLITAVGVV--------NLRDTLEKAL---GYDYLQLPIEQLPEDLDFEGHNLGAEVFVTD 175 (294)
T ss_dssp TTHHHHHHHHTTTS----SEEEEES--S---------HHHHHHHHH---SS-GGGS-GGG--SEEEETTEEEEHHHHHHH
T ss_pred hhhHHHHHHHhhcc--CcceEEEEeeee--------eHHHHHHHHh---ccchhhcchhhCCCcccccccccchHHHHHH
Confidence 99999999999743 366666444321 1233333332 2334332222111000000022223345555
Q ss_pred HHhcCCCcchhhhhhhhhcccchhHHhhhhhhccchhHHHHHHHHHHHhh--cCCcceeeecCCCccccccCh
Q 025845 166 KIYQLCPPEVINLLRITFIGRAIVLRQIVSYLYLDSDTMQIMLNFIIIII--ITTHMSELINCSRRAFFLYHN 236 (247)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~D~~~p~~~~~~~~~~~--~~~~~~~~i~~~gH~~~~e~p 236 (247)
.+...-. .+..+.....+.+++-....+++|..+......++. .. .+..+++.++|++|-. -|+|
T Consensus 176 c~e~~w~----~l~ST~~~~k~l~iP~iaF~A~~D~WV~q~eV~~~~-~~~~s~~~klysl~Gs~HdL-~enl 242 (294)
T PF02273_consen 176 CFEHGWD----DLDSTINDMKRLSIPFIAFTANDDDWVKQSEVEELL-DNINSNKCKLYSLPGSSHDL-GENL 242 (294)
T ss_dssp HHHTT-S----SHHHHHHHHTT--S-EEEEEETT-TTS-HHHHHHHH-TT-TT--EEEEEETT-SS-T-TSSH
T ss_pred HHHcCCc----cchhHHHHHhhCCCCEEEEEeCCCccccHHHHHHHH-HhcCCCceeEEEecCccchh-hhCh
Confidence 5533221 223333445555666666778999998888777776 53 3557899999999973 3444
No 112
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.06 E-value=6.1e-09 Score=71.17 Aligned_cols=112 Identities=20% Similarity=0.200 Sum_probs=85.8
Q ss_pred CcEEEEEcCCCCChh--hHHHHHHHHHhCCcEEEEecCCCC-----CCCCCcccCccCHHHhHHHHHHHHHhCCCCCcEE
Q 025845 9 EKHFVLVHGVNHGAW--CWYKLKARLVAGGHRVTAVDLAAS-----GINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVI 81 (247)
Q Consensus 9 ~~~iv~lhG~~~~~~--~~~~~~~~l~~~g~~vi~~D~~G~-----G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~ 81 (247)
.-+||+-||.+++.+ ....++..|+.+|+.|..|++|-. |...+++....-...+...+.++...+ ...+.+
T Consensus 14 ~~tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~l-~~gpLi 92 (213)
T COG3571 14 PVTILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAGL-AEGPLI 92 (213)
T ss_pred CEEEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhcc-cCCcee
Confidence 348999999987654 478899999999999999999753 322233333345567788888888888 777999
Q ss_pred EEEEehhHHHHHHHHHhCCCccceEEEEeccCCCCCCChH
Q 025845 82 LVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPS 121 (247)
Q Consensus 82 lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~ 121 (247)
+-|+||||-++...+......|.+|++++-+.-.++++..
T Consensus 93 ~GGkSmGGR~aSmvade~~A~i~~L~clgYPfhppGKPe~ 132 (213)
T COG3571 93 IGGKSMGGRVASMVADELQAPIDGLVCLGYPFHPPGKPEQ 132 (213)
T ss_pred eccccccchHHHHHHHhhcCCcceEEEecCccCCCCCccc
Confidence 9999999999988887655559999999876556665544
No 113
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=99.05 E-value=3.3e-09 Score=79.82 Aligned_cols=108 Identities=17% Similarity=0.176 Sum_probs=70.0
Q ss_pred CCCCcEEEEEcCCCCChhhH-HHHHHHHHhCCc--EEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhC---CCCCc
Q 025845 6 GMEEKHFVLVHGVNHGAWCW-YKLKARLVAGGH--RVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASL---PAEEK 79 (247)
Q Consensus 6 ~~~~~~iv~lhG~~~~~~~~-~~~~~~l~~~g~--~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l---~~~~~ 79 (247)
.+.+..+||+||+..+...- ...++.....++ .++.|.||+.|.-..-.....+...-...+.++|..| .+.++
T Consensus 15 ~~~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~~~~~~ 94 (233)
T PF05990_consen 15 SPDKEVLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARAPGIKR 94 (233)
T ss_pred CCCCeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhccCCce
Confidence 35678999999999886653 333332222233 7999999988753221111123334445555555554 16789
Q ss_pred EEEEEEehhHHHHHHHHHh----CC-----CccceEEEEeccC
Q 025845 80 VILVGHSLGGVTLALAADK----FP-----HKISVAVFVTAFM 113 (247)
Q Consensus 80 ~~lvGhS~Gg~ia~~~a~~----~p-----~~v~~lvl~~~~~ 113 (247)
++|++||||+.+.+.+... .+ .++..+|+++|-.
T Consensus 95 I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDi 137 (233)
T PF05990_consen 95 IHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDI 137 (233)
T ss_pred EEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCC
Confidence 9999999999998887553 22 2578899888643
No 114
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=99.04 E-value=4.2e-09 Score=78.15 Aligned_cols=98 Identities=21% Similarity=0.247 Sum_probs=76.4
Q ss_pred EEcCCC--CChhhHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCCcEEEEEEehhHHH
Q 025845 14 LVHGVN--HGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGVT 91 (247)
Q Consensus 14 ~lhG~~--~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~lvGhS~Gg~i 91 (247)
++|+.+ ++...|.++...|.. +++|+++|++|++.+.... .+++.+++.+.+.+.......+++++|||+||.+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~l~~-~~~v~~~~~~g~~~~~~~~---~~~~~~~~~~~~~l~~~~~~~~~~l~g~s~Gg~~ 77 (212)
T smart00824 2 CFPSTAAPSGPHEYARLAAALRG-RRDVSALPLPGFGPGEPLP---ASADALVEAQAEAVLRAAGGRPFVLVGHSSGGLL 77 (212)
T ss_pred ccCCCCCCCcHHHHHHHHHhcCC-CccEEEecCCCCCCCCCCC---CCHHHHHHHHHHHHHHhcCCCCeEEEEECHHHHH
Confidence 455544 677889999999984 6999999999998765443 4778888877765555425679999999999999
Q ss_pred HHHHHHh---CCCccceEEEEeccCCC
Q 025845 92 LALAADK---FPHKISVAVFVTAFMPD 115 (247)
Q Consensus 92 a~~~a~~---~p~~v~~lvl~~~~~~~ 115 (247)
+..++.+ .++++.+++++++..+.
T Consensus 78 a~~~a~~l~~~~~~~~~l~~~~~~~~~ 104 (212)
T smart00824 78 AHAVAARLEARGIPPAAVVLLDTYPPG 104 (212)
T ss_pred HHHHHHHHHhCCCCCcEEEEEccCCCC
Confidence 9988875 45679999999886443
No 115
>COG0400 Predicted esterase [General function prediction only]
Probab=99.04 E-value=2e-09 Score=78.80 Aligned_cols=111 Identities=15% Similarity=0.166 Sum_probs=75.4
Q ss_pred cCCCCCCcEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEecCCC--CCCCC---CcccCcc-------CHHHhHHHHHHH
Q 025845 3 EVVGMEEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAA--SGINM---KRIEDVH-------TFHAYSEPLMEV 70 (247)
Q Consensus 3 ~~~~~~~~~iv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G--~G~S~---~~~~~~~-------~~~~~~~~l~~~ 70 (247)
..+++..|.||++||+|++...+-+....+. .++.++.+.=+= .|.-. ......+ ..+.+++-+.+.
T Consensus 12 ~~~~p~~~~iilLHG~Ggde~~~~~~~~~~~-P~~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~ 90 (207)
T COG0400 12 KPGDPAAPLLILLHGLGGDELDLVPLPELIL-PNATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEEL 90 (207)
T ss_pred CCCCCCCcEEEEEecCCCChhhhhhhhhhcC-CCCeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHH
Confidence 4566777889999999999999888666665 346666543210 00000 0000112 333344555555
Q ss_pred HHhCCCC--CcEEEEEEehhHHHHHHHHHhCCCccceEEEEeccCCC
Q 025845 71 LASLPAE--EKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPD 115 (247)
Q Consensus 71 i~~l~~~--~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 115 (247)
.++. +. ++++++|+|-||++++....++|+.++++|+.++..+.
T Consensus 91 ~~~~-gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~ 136 (207)
T COG0400 91 AEEY-GIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPL 136 (207)
T ss_pred HHHh-CCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCC
Confidence 5555 44 89999999999999999999999999999999986544
No 116
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.03 E-value=1.5e-09 Score=80.21 Aligned_cols=105 Identities=22% Similarity=0.182 Sum_probs=75.5
Q ss_pred CCCcEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhC------CCCCcE
Q 025845 7 MEEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASL------PAEEKV 80 (247)
Q Consensus 7 ~~~~~iv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l------~~~~~~ 80 (247)
+.=|.|+|+||+.-....|..+...++.+||=|+++++-..- ......+..+....++++.+-++++ .+..++
T Consensus 44 G~yPVilF~HG~~l~ns~Ys~lL~HIASHGfIVVAPQl~~~~-~p~~~~Ei~~aa~V~~WL~~gL~~~Lp~~V~~nl~kl 122 (307)
T PF07224_consen 44 GTYPVILFLHGFNLYNSFYSQLLAHIASHGFIVVAPQLYTLF-PPDGQDEIKSAASVINWLPEGLQHVLPENVEANLSKL 122 (307)
T ss_pred CCccEEEEeechhhhhHHHHHHHHHHhhcCeEEEechhhccc-CCCchHHHHHHHHHHHHHHhhhhhhCCCCcccccceE
Confidence 445889999999999999999999999999999999987531 1111111122333333343333333 257899
Q ss_pred EEEEEehhHHHHHHHHHhCC-C-ccceEEEEecc
Q 025845 81 ILVGHSLGGVTLALAADKFP-H-KISVAVFVTAF 112 (247)
Q Consensus 81 ~lvGhS~Gg~ia~~~a~~~p-~-~v~~lvl~~~~ 112 (247)
.++|||.||..|..+|..+- + .+.+||.++|.
T Consensus 123 al~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV 156 (307)
T PF07224_consen 123 ALSGHSRGGKTAFALALGYATSLKFSALIGIDPV 156 (307)
T ss_pred EEeecCCccHHHHHHHhcccccCchhheeccccc
Confidence 99999999999999998773 2 47899999884
No 117
>PRK10115 protease 2; Provisional
Probab=99.02 E-value=8.2e-09 Score=89.43 Aligned_cols=108 Identities=16% Similarity=0.171 Sum_probs=83.6
Q ss_pred CCCCcEEEEEcCCCCChh--hHHHHHHHHHhCCcEEEEecCCCCCCCCCc-------ccCccCHHHhHHHHHHHHHhC-C
Q 025845 6 GMEEKHFVLVHGVNHGAW--CWYKLKARLVAGGHRVTAVDLAASGINMKR-------IEDVHTFHAYSEPLMEVLASL-P 75 (247)
Q Consensus 6 ~~~~~~iv~lhG~~~~~~--~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~-------~~~~~~~~~~~~~l~~~i~~l-~ 75 (247)
+++.|.||++||..+... .|......|.++||.|+.++.||.|.=... .....+++++++-+..+++.- .
T Consensus 442 ~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~w~~~g~~~~k~~~~~D~~a~~~~Lv~~g~~ 521 (686)
T PRK10115 442 KGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQWYEDGKFLKKKNTFNDYLDACDALLKLGYG 521 (686)
T ss_pred CCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCccCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcCCC
Confidence 345699999999876653 377777788889999999999996543211 112357888888777777653 2
Q ss_pred CCCcEEEEEEehhHHHHHHHHHhCCCccceEEEEeccC
Q 025845 76 AEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFM 113 (247)
Q Consensus 76 ~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 113 (247)
..+++.+.|-|.||+++..++.++|++.+++|...+..
T Consensus 522 d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~ 559 (686)
T PRK10115 522 SPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFV 559 (686)
T ss_pred ChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCch
Confidence 46899999999999999999999999999999877753
No 118
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=98.97 E-value=1.3e-08 Score=80.34 Aligned_cols=101 Identities=18% Similarity=0.244 Sum_probs=79.2
Q ss_pred CcEEEEEcCCCCChhhH-----HHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhH-----HHHHHHHHhCCCCC
Q 025845 9 EKHFVLVHGVNHGAWCW-----YKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYS-----EPLMEVLASLPAEE 78 (247)
Q Consensus 9 ~~~iv~lhG~~~~~~~~-----~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~-----~~l~~~i~~l~~~~ 78 (247)
++|++.+|.+-.....| +.++..|.+.|+.|..+|+++=..+.. ..++++++ +.+..+.+.. +.+
T Consensus 107 ~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~----~~~~edYi~e~l~~aid~v~~it-g~~ 181 (445)
T COG3243 107 KRPLLIVPPWINKFYILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLA----AKNLEDYILEGLSEAIDTVKDIT-GQK 181 (445)
T ss_pred CCceEeeccccCceeEEeCCCCccHHHHHHHcCCceEEEeccCchHhhh----hccHHHHHHHHHHHHHHHHHHHh-Ccc
Confidence 57999999998877776 478888888999999999986555543 24666665 4444444555 789
Q ss_pred cEEEEEEehhHHHHHHHHHhCCCc-cceEEEEeccCC
Q 025845 79 KVILVGHSLGGVTLALAADKFPHK-ISVAVFVTAFMP 114 (247)
Q Consensus 79 ~~~lvGhS~Gg~ia~~~a~~~p~~-v~~lvl~~~~~~ 114 (247)
+++++|++.||+++..++..++.+ |+++++..+..+
T Consensus 182 ~InliGyCvGGtl~~~ala~~~~k~I~S~T~lts~~D 218 (445)
T COG3243 182 DINLIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVD 218 (445)
T ss_pred ccceeeEecchHHHHHHHHhhhhcccccceeeecchh
Confidence 999999999999999988888877 999998887544
No 119
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.97 E-value=3e-09 Score=84.45 Aligned_cols=101 Identities=26% Similarity=0.267 Sum_probs=82.5
Q ss_pred CcEEEEEcCCCCChhhHHHHHHHHHhCCcE---EEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCCcEEEEEE
Q 025845 9 EKHFVLVHGVNHGAWCWYKLKARLVAGGHR---VTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGH 85 (247)
Q Consensus 9 ~~~iv~lhG~~~~~~~~~~~~~~l~~~g~~---vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~lvGh 85 (247)
.-|+|++||++++...|..+...+...|+. ++++++++- ....+ ....-+.+.+.+.+++... +.+++.|+||
T Consensus 59 ~~pivlVhG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~--~~~~~~ql~~~V~~~l~~~-ga~~v~LigH 134 (336)
T COG1075 59 KEPIVLVHGLGGGYGNFLPLDYRLAILGWLTNGVYAFELSGG-DGTYS--LAVRGEQLFAYVDEVLAKT-GAKKVNLIGH 134 (336)
T ss_pred CceEEEEccCcCCcchhhhhhhhhcchHHHhccccccccccc-CCCcc--ccccHHHHHHHHHHHHhhc-CCCceEEEee
Confidence 459999999998999999888888777777 999998866 11111 1246677777777888777 7899999999
Q ss_pred ehhHHHHHHHHHhCC--CccceEEEEeccC
Q 025845 86 SLGGVTLALAADKFP--HKISVAVFVTAFM 113 (247)
Q Consensus 86 S~Gg~ia~~~a~~~p--~~v~~lvl~~~~~ 113 (247)
||||.++..++...+ .+|+.++.++++-
T Consensus 135 S~GG~~~ry~~~~~~~~~~V~~~~tl~tp~ 164 (336)
T COG1075 135 SMGGLDSRYYLGVLGGANRVASVVTLGTPH 164 (336)
T ss_pred cccchhhHHHHhhcCccceEEEEEEeccCC
Confidence 999999999999888 7999999999853
No 120
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=98.97 E-value=9.1e-09 Score=71.65 Aligned_cols=92 Identities=20% Similarity=0.233 Sum_probs=67.1
Q ss_pred CcEEEEEcCCCCCh-hhHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCCcEEEEEEeh
Q 025845 9 EKHFVLVHGVNHGA-WCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSL 87 (247)
Q Consensus 9 ~~~iv~lhG~~~~~-~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~lvGhS~ 87 (247)
.+.++.+||+.+|. ..|...-+.-. -.+-.++++ ....-..++|++.+.+.+... .++++||+||+
T Consensus 2 ~~~~lIVpG~~~Sg~~HWq~~we~~l---~~a~rveq~--------~w~~P~~~dWi~~l~~~v~a~--~~~~vlVAHSL 68 (181)
T COG3545 2 MTDVLIVPGYGGSGPNHWQSRWESAL---PNARRVEQD--------DWEAPVLDDWIARLEKEVNAA--EGPVVLVAHSL 68 (181)
T ss_pred CceEEEecCCCCCChhHHHHHHHhhC---ccchhcccC--------CCCCCCHHHHHHHHHHHHhcc--CCCeEEEEecc
Confidence 46789999998764 45765443211 123333332 111248899999999888877 45799999999
Q ss_pred hHHHHHHHHHhCCCccceEEEEeccC
Q 025845 88 GGVTLALAADKFPHKISVAVFVTAFM 113 (247)
Q Consensus 88 Gg~ia~~~a~~~p~~v~~lvl~~~~~ 113 (247)
|+..++.++......|.++.|++++.
T Consensus 69 Gc~~v~h~~~~~~~~V~GalLVAppd 94 (181)
T COG3545 69 GCATVAHWAEHIQRQVAGALLVAPPD 94 (181)
T ss_pred cHHHHHHHHHhhhhccceEEEecCCC
Confidence 99999999988777999999999974
No 121
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.92 E-value=1.8e-08 Score=76.01 Aligned_cols=101 Identities=21% Similarity=0.182 Sum_probs=77.7
Q ss_pred cEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEecCCCC-CCCCCcc--c---C-----ccCHHHhHHHHHHHHHhCC---
Q 025845 10 KHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAAS-GINMKRI--E---D-----VHTFHAYSEPLMEVLASLP--- 75 (247)
Q Consensus 10 ~~iv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~-G~S~~~~--~---~-----~~~~~~~~~~l~~~i~~l~--- 75 (247)
|.||++|++.|-....+.+++.|++.||-|+++|+-+. |.+.... . . ..+..+...|+.+.++.|.
T Consensus 28 P~VIv~hei~Gl~~~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~~~~L~~~~ 107 (236)
T COG0412 28 PGVIVLHEIFGLNPHIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAELETGLVERVDPAEVLADIDAALDYLARQP 107 (236)
T ss_pred CEEEEEecccCCchHHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHHHhhhhhccCCHHHHHHHHHHHHHHHHhCC
Confidence 89999999999999999999999999999999999763 3332211 0 0 1233677777777777761
Q ss_pred --CCCcEEEEEEehhHHHHHHHHHhCCCccceEEEEec
Q 025845 76 --AEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTA 111 (247)
Q Consensus 76 --~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~ 111 (247)
..+++.++|+||||.+++.++.+.| .|++.|..-+
T Consensus 108 ~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg 144 (236)
T COG0412 108 QVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYG 144 (236)
T ss_pred CCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecC
Confidence 3578999999999999999998877 6777774433
No 122
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.89 E-value=1.5e-07 Score=69.24 Aligned_cols=108 Identities=13% Similarity=0.199 Sum_probs=83.4
Q ss_pred CCCcEEEEEcCCCCChhhHHHHHHHHHhC---CcEEEEecCCCCCCCCC---cc-----cCccCHHHhHHHHHHHHHhC-
Q 025845 7 MEEKHFVLVHGVNHGAWCWYKLKARLVAG---GHRVTAVDLAASGINMK---RI-----EDVHTFHAYSEPLMEVLASL- 74 (247)
Q Consensus 7 ~~~~~iv~lhG~~~~~~~~~~~~~~l~~~---g~~vi~~D~~G~G~S~~---~~-----~~~~~~~~~~~~l~~~i~~l- 74 (247)
..++.+++++|.+|....|..++..|-.. ..+++.+...||-.-+. .. .+.++.++.++.-.++++..
T Consensus 27 ~~~~li~~IpGNPG~~gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaFik~~~ 106 (301)
T KOG3975|consen 27 EDKPLIVWIPGNPGLLGFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAFIKEYV 106 (301)
T ss_pred CCceEEEEecCCCCchhHHHHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHHHHHHHhC
Confidence 45678999999999999998888877542 25688888888875541 11 13578899999999988876
Q ss_pred CCCCcEEEEEEehhHHHHHHHHHhC-C-CccceEEEEeccCC
Q 025845 75 PAEEKVILVGHSLGGVTLALAADKF-P-HKISVAVFVTAFMP 114 (247)
Q Consensus 75 ~~~~~~~lvGhS~Gg~ia~~~a~~~-p-~~v~~lvl~~~~~~ 114 (247)
+...+++++|||.|+++.+.+.... + -.|.+++++=|..-
T Consensus 107 Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTIe 148 (301)
T KOG3975|consen 107 PKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTIE 148 (301)
T ss_pred CCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchHH
Confidence 6678999999999999999988732 2 36889988877543
No 123
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=98.89 E-value=2.8e-08 Score=77.04 Aligned_cols=110 Identities=16% Similarity=0.101 Sum_probs=74.4
Q ss_pred CCCCCcEEEEEcCCCCChhh-HHHH---H------HHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhC
Q 025845 5 VGMEEKHFVLVHGVNHGAWC-WYKL---K------ARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASL 74 (247)
Q Consensus 5 ~~~~~~~iv~lhG~~~~~~~-~~~~---~------~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l 74 (247)
.+..-|+||..|+++.+... .... . ..+.++||.|+..|.||+|.|...... .....++|..++|+-+
T Consensus 16 ~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~--~~~~e~~D~~d~I~W~ 93 (272)
T PF02129_consen 16 GGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDP--MSPNEAQDGYDTIEWI 93 (272)
T ss_dssp TSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-T--TSHHHHHHHHHHHHHH
T ss_pred CCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCcccc--CChhHHHHHHHHHHHH
Confidence 34556899999999865422 2211 1 127779999999999999999987643 1455556665555554
Q ss_pred ---C-CCCcEEEEEEehhHHHHHHHHHhCCCccceEEEEeccCCCC
Q 025845 75 ---P-AEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDT 116 (247)
Q Consensus 75 ---~-~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~ 116 (247)
+ ...+|-++|.|++|..++.+|...|..+++++...+.....
T Consensus 94 ~~Qpws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d~~ 139 (272)
T PF02129_consen 94 AAQPWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSDLY 139 (272)
T ss_dssp HHCTTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SBTC
T ss_pred HhCCCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCccc
Confidence 1 22589999999999999999998888999999887754433
No 124
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=98.88 E-value=1e-08 Score=76.47 Aligned_cols=87 Identities=22% Similarity=0.247 Sum_probs=51.7
Q ss_pred CcEEEEEcCCCCChhhHHHHHHHHHh--CCcEEEEecCCCCCCCCCcccCccCHHHhHHHH----HHHHHhCCC-CCcEE
Q 025845 9 EKHFVLVHGVNHGAWCWYKLKARLVA--GGHRVTAVDLAASGINMKRIEDVHTFHAYSEPL----MEVLASLPA-EEKVI 81 (247)
Q Consensus 9 ~~~iv~lhG~~~~~~~~~~~~~~l~~--~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l----~~~i~~l~~-~~~~~ 81 (247)
.-.|||+||+.|+...|..+...+.. ..+.-..+...+.-... .....+++..++.+ .+.++.... ..+++
T Consensus 4 ~hLvV~vHGL~G~~~d~~~~~~~l~~~~~~~~~~~i~~~~~~~n~--~~T~~gI~~~g~rL~~eI~~~~~~~~~~~~~Is 81 (217)
T PF05057_consen 4 VHLVVFVHGLWGNPADMRYLKNHLEKIPEDLPNARIVVLGYSNNE--FKTFDGIDVCGERLAEEILEHIKDYESKIRKIS 81 (217)
T ss_pred CEEEEEeCCCCCCHHHHHHHHHHHHHhhhhcchhhhhhhcccccc--cccchhhHHHHHHHHHHHHHhccccccccccce
Confidence 34799999999999999888877764 12221122222221111 11123455555444 444444422 25899
Q ss_pred EEEEehhHHHHHHHHH
Q 025845 82 LVGHSLGGVTLALAAD 97 (247)
Q Consensus 82 lvGhS~Gg~ia~~~a~ 97 (247)
+|||||||.++..+..
T Consensus 82 fIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 82 FIGHSLGGLIARYALG 97 (217)
T ss_pred EEEecccHHHHHHHHH
Confidence 9999999999876654
No 125
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=98.86 E-value=1e-08 Score=82.60 Aligned_cols=107 Identities=20% Similarity=0.269 Sum_probs=60.9
Q ss_pred CCCcEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEecCCCCCCC------CCc---cc---------------Cc---cC
Q 025845 7 MEEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGIN------MKR---IE---------------DV---HT 59 (247)
Q Consensus 7 ~~~~~iv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S------~~~---~~---------------~~---~~ 59 (247)
..-|.|||-||++++...+..++..|+.+||=|+++|.|..-.+ +.. .. .. ..
T Consensus 98 ~~~PvvIFSHGlgg~R~~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (379)
T PF03403_consen 98 GKFPVVIFSHGLGGSRTSYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPEEE 177 (379)
T ss_dssp S-EEEEEEE--TT--TTTTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GGGH
T ss_pred CCCCEEEEeCCCCcchhhHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccchhH
Confidence 34589999999999999999999999999999999999953111 000 00 00 00
Q ss_pred H----H---HhHHHHHHHHHhC-----C--------------------CCCcEEEEEEehhHHHHHHHHHhCCCccceEE
Q 025845 60 F----H---AYSEPLMEVLASL-----P--------------------AEEKVILVGHSLGGVTLALAADKFPHKISVAV 107 (247)
Q Consensus 60 ~----~---~~~~~l~~~i~~l-----~--------------------~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lv 107 (247)
. . .-++++..+++.+ + +.+++.++|||+||..++..+.+. .+++..|
T Consensus 178 ~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d-~r~~~~I 256 (379)
T PF03403_consen 178 FELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD-TRFKAGI 256 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH--TT--EEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc-cCcceEE
Confidence 0 0 1122333333221 0 246799999999999999888776 6799999
Q ss_pred EEeccCC
Q 025845 108 FVTAFMP 114 (247)
Q Consensus 108 l~~~~~~ 114 (247)
+++++..
T Consensus 257 ~LD~W~~ 263 (379)
T PF03403_consen 257 LLDPWMF 263 (379)
T ss_dssp EES---T
T ss_pred EeCCccc
Confidence 9999743
No 126
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=98.86 E-value=2.3e-08 Score=87.37 Aligned_cols=84 Identities=17% Similarity=0.070 Sum_probs=65.6
Q ss_pred HHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCC-------------------CCcEEEEEEeh
Q 025845 27 KLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPA-------------------EEKVILVGHSL 87 (247)
Q Consensus 27 ~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~-------------------~~~~~lvGhS~ 87 (247)
.+.+.|..+||.|+.+|.||+|.|++.... .. .+..+|..++|+.+.+ ..++.++|.|+
T Consensus 270 ~~~~~~~~rGYaVV~~D~RGtg~SeG~~~~-~~-~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY 347 (767)
T PRK05371 270 SLNDYFLPRGFAVVYVSGIGTRGSDGCPTT-GD-YQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSY 347 (767)
T ss_pred hHHHHHHhCCeEEEEEcCCCCCCCCCcCcc-CC-HHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcH
Confidence 345678889999999999999999886531 11 3455566666665520 46999999999
Q ss_pred hHHHHHHHHHhCCCccceEEEEecc
Q 025845 88 GGVTLALAADKFPHKISVAVFVTAF 112 (247)
Q Consensus 88 Gg~ia~~~a~~~p~~v~~lvl~~~~ 112 (247)
||.+++.+|...|+.++.+|.+++.
T Consensus 348 ~G~~~~~aAa~~pp~LkAIVp~a~i 372 (767)
T PRK05371 348 LGTLPNAVATTGVEGLETIIPEAAI 372 (767)
T ss_pred HHHHHHHHHhhCCCcceEEEeeCCC
Confidence 9999999999888899999987765
No 127
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=98.82 E-value=4.3e-08 Score=72.19 Aligned_cols=104 Identities=20% Similarity=0.202 Sum_probs=74.4
Q ss_pred cEEEEEcCCCCChhhHHHHHHHHHhCCc------EEEEecCCCC----CCCCCcc----------cCccCHHHhHHHHHH
Q 025845 10 KHFVLVHGVNHGAWCWYKLKARLVAGGH------RVTAVDLAAS----GINMKRI----------EDVHTFHAYSEPLME 69 (247)
Q Consensus 10 ~~iv~lhG~~~~~~~~~~~~~~l~~~g~------~vi~~D~~G~----G~S~~~~----------~~~~~~~~~~~~l~~ 69 (247)
-|.+|+||.+|+++..+..+..|... + =++.+|--|. |.=++.. ....+..++...+..
T Consensus 46 iPTIfIhGsgG~asS~~~Mv~ql~~~-~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk~ 124 (288)
T COG4814 46 IPTIFIHGSGGTASSLNGMVNQLLPD-YKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLKK 124 (288)
T ss_pred cceEEEecCCCChhHHHHHHHHhhhc-ccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHHH
Confidence 48899999999999999999999864 4 2455665551 1101111 112366666777777
Q ss_pred HHHhC---CCCCcEEEEEEehhHHHHHHHHHhCCC-----ccceEEEEeccCC
Q 025845 70 VLASL---PAEEKVILVGHSLGGVTLALAADKFPH-----KISVAVFVTAFMP 114 (247)
Q Consensus 70 ~i~~l---~~~~~~~lvGhS~Gg~ia~~~a~~~p~-----~v~~lvl~~~~~~ 114 (247)
++..| .+++++.+|||||||.-...|+..|.+ .++++|.++++..
T Consensus 125 ~msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN 177 (288)
T COG4814 125 AMSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFN 177 (288)
T ss_pred HHHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccccc
Confidence 77666 578999999999999988888876532 4899999988543
No 128
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.79 E-value=1.2e-08 Score=75.77 Aligned_cols=104 Identities=26% Similarity=0.271 Sum_probs=74.0
Q ss_pred CCCcEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEecCCCCCCCCCc----cc----------------CccCHH---Hh
Q 025845 7 MEEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKR----IE----------------DVHTFH---AY 63 (247)
Q Consensus 7 ~~~~~iv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~----~~----------------~~~~~~---~~ 63 (247)
+..|.||-.||.+++...|......-. .||.|+.+|.||.|.|+.. +. ..|-+. ..
T Consensus 81 ~~~P~vV~fhGY~g~~g~~~~~l~wa~-~Gyavf~MdvRGQg~~~~dt~~~p~~~s~pG~mtrGilD~kd~yyyr~v~~D 159 (321)
T COG3458 81 GKLPAVVQFHGYGGRGGEWHDMLHWAV-AGYAVFVMDVRGQGSSSQDTADPPGGPSDPGFMTRGILDRKDTYYYRGVFLD 159 (321)
T ss_pred CccceEEEEeeccCCCCCccccccccc-cceeEEEEecccCCCccccCCCCCCCCcCCceeEeecccCCCceEEeeehHH
Confidence 567899999999999988877776555 7999999999999988431 10 011111 12
Q ss_pred HHHHHHHHHhCC--CCCcEEEEEEehhHHHHHHHHHhCCCccceEEEEecc
Q 025845 64 SEPLMEVLASLP--AEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAF 112 (247)
Q Consensus 64 ~~~l~~~i~~l~--~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 112 (247)
+-.+.+++..|. +.+++.+.|.|.||.+++.++...| ++++++..=|+
T Consensus 160 ~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~-rik~~~~~~Pf 209 (321)
T COG3458 160 AVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP-RIKAVVADYPF 209 (321)
T ss_pred HHHHHHHHhccCccchhheEEeccccCchhhhhhhhcCh-hhhcccccccc
Confidence 222333344442 5689999999999999999988765 78888866554
No 129
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=98.79 E-value=2e-07 Score=69.15 Aligned_cols=105 Identities=16% Similarity=0.118 Sum_probs=68.1
Q ss_pred CCcEEEEEcCCCCChhhHHHH--HHHHHh-CCcEEEEecCCCCCCCCC------c--ccCccCHHHhHHHHHHHHHhCC-
Q 025845 8 EEKHFVLVHGVNHGAWCWYKL--KARLVA-GGHRVTAVDLAASGINMK------R--IEDVHTFHAYSEPLMEVLASLP- 75 (247)
Q Consensus 8 ~~~~iv~lhG~~~~~~~~~~~--~~~l~~-~g~~vi~~D~~G~G~S~~------~--~~~~~~~~~~~~~l~~~i~~l~- 75 (247)
..|.||++||.+++...+... ...+++ +||-|+.++......... . .....+...+++-+.++..+..
T Consensus 15 ~~PLVv~LHG~~~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~lv~~v~~~~~i 94 (220)
T PF10503_consen 15 PVPLVVVLHGCGQSAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAALVDYVAARYNI 94 (220)
T ss_pred CCCEEEEeCCCCCCHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhhHHHHHHhHhhhccc
Confidence 458899999999998876532 234544 678888888642111100 0 0011122222222333333331
Q ss_pred CCCcEEEEEEehhHHHHHHHHHhCCCccceEEEEecc
Q 025845 76 AEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAF 112 (247)
Q Consensus 76 ~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 112 (247)
+.+++++.|+|.||+++..++..+|+.+.++...+..
T Consensus 95 D~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~ 131 (220)
T PF10503_consen 95 DPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGV 131 (220)
T ss_pred CCCceeeEEECHHHHHHHHHHHhCCccceEEEeeccc
Confidence 5579999999999999999999999999998887775
No 130
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=98.79 E-value=4.5e-08 Score=77.03 Aligned_cols=105 Identities=21% Similarity=0.118 Sum_probs=61.4
Q ss_pred CCCCcEEEEEcCCCCChhh----H--------------HHHHHHHHhCCcEEEEecCCCCCCCCCccc----CccCHHHh
Q 025845 6 GMEEKHFVLVHGVNHGAWC----W--------------YKLKARLVAGGHRVTAVDLAASGINMKRIE----DVHTFHAY 63 (247)
Q Consensus 6 ~~~~~~iv~lhG~~~~~~~----~--------------~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~----~~~~~~~~ 63 (247)
++.-|.||++||-++..+. + ..++..|+++||-|+++|.+|+|....... ..++.+.+
T Consensus 112 ~~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYVvla~D~~g~GER~~~e~~~~~~~~~~~~l 191 (390)
T PF12715_consen 112 KGPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYVVLAPDALGFGERGDMEGAAQGSNYDCQAL 191 (390)
T ss_dssp -S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSEEEEE--TTSGGG-SSCCCTTTTS--HHHH
T ss_pred CCCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCCEEEEEccccccccccccccccccchhHHHH
Confidence 3455899999999876533 1 135788999999999999999998765331 11222222
Q ss_pred H---------------HH---HHHHHHhCC--CCCcEEEEEEehhHHHHHHHHHhCCCccceEEEEec
Q 025845 64 S---------------EP---LMEVLASLP--AEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTA 111 (247)
Q Consensus 64 ~---------------~~---l~~~i~~l~--~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~ 111 (247)
+ -| +.+++..++ +.+++.++|+||||..++.+|+.. ++|+..|..+.
T Consensus 192 a~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaALD-dRIka~v~~~~ 258 (390)
T PF12715_consen 192 ARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAALD-DRIKATVANGY 258 (390)
T ss_dssp HHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH--TT--EEEEES-
T ss_pred HHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHcc-hhhHhHhhhhh
Confidence 2 11 223333332 457999999999999999999875 58988876654
No 131
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=98.76 E-value=8.4e-07 Score=70.26 Aligned_cols=105 Identities=14% Similarity=0.077 Sum_probs=69.1
Q ss_pred CCCcEEEEEcCCC---CChhhH-HHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHh---CC-CCC
Q 025845 7 MEEKHFVLVHGVN---HGAWCW-YKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLAS---LP-AEE 78 (247)
Q Consensus 7 ~~~~~iv~lhG~~---~~~~~~-~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~---l~-~~~ 78 (247)
...|.||++||.+ ++.... ..+...+...|+.|+.+|+|-.-.-. ....+++..+-+..+.++ ++ +.+
T Consensus 77 ~~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~~----~p~~~~d~~~a~~~l~~~~~~~g~dp~ 152 (312)
T COG0657 77 ATAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEHP----FPAALEDAYAAYRWLRANAAELGIDPS 152 (312)
T ss_pred CCCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCCC----CCchHHHHHHHHHHHHhhhHhhCCCcc
Confidence 3579999999986 445555 45555556589999999999432221 112444433333333332 21 368
Q ss_pred cEEEEEEehhHHHHHHHHHhCCC----ccceEEEEeccCCC
Q 025845 79 KVILVGHSLGGVTLALAADKFPH----KISVAVFVTAFMPD 115 (247)
Q Consensus 79 ~~~lvGhS~Gg~ia~~~a~~~p~----~v~~lvl~~~~~~~ 115 (247)
++.+.|+|-||.+++.++..-.+ .....+++.+....
T Consensus 153 ~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~ 193 (312)
T COG0657 153 RIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDL 193 (312)
T ss_pred ceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCC
Confidence 99999999999999998875433 46788888886443
No 132
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=98.74 E-value=2.6e-08 Score=79.93 Aligned_cols=107 Identities=21% Similarity=0.266 Sum_probs=81.0
Q ss_pred CCCcEEEEEcCCCCChhhH------HHHHHHHHhCCcEEEEecCCCCCCCCCcc-------cC--ccCHHHhH-HHHHHH
Q 025845 7 MEEKHFVLVHGVNHGAWCW------YKLKARLVAGGHRVTAVDLAASGINMKRI-------ED--VHTFHAYS-EPLMEV 70 (247)
Q Consensus 7 ~~~~~iv~lhG~~~~~~~~------~~~~~~l~~~g~~vi~~D~~G~G~S~~~~-------~~--~~~~~~~~-~~l~~~ 70 (247)
.++|+|++.||+.+++..| ..++=.|+++||.|..-+.||.-.|.... .+ ..++++++ -||-+.
T Consensus 71 ~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr~h~~l~~~~~~~FW~FS~~Em~~yDLPA~ 150 (403)
T KOG2624|consen 71 KKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSRKHKKLSPSSDKEFWDFSWHEMGTYDLPAM 150 (403)
T ss_pred CCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcCcccchhhcccCCcCCcceeecchhhhhhcCHHHH
Confidence 6789999999999999999 34556778899999999999987775321 11 23455533 344444
Q ss_pred HHhC---CCCCcEEEEEEehhHHHHHHHHHhCCC---ccceEEEEeccC
Q 025845 71 LASL---PAEEKVILVGHSLGGVTLALAADKFPH---KISVAVFVTAFM 113 (247)
Q Consensus 71 i~~l---~~~~~~~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~~ 113 (247)
|+.. .+.++++.||||.|+.....++...|+ +|+..++++|..
T Consensus 151 IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~ 199 (403)
T KOG2624|consen 151 IDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAA 199 (403)
T ss_pred HHHHHHhccccceEEEEEEccchhheehhcccchhhhhhheeeeecchh
Confidence 4443 267899999999999998888887765 799999999964
No 133
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=98.73 E-value=6e-08 Score=74.54 Aligned_cols=102 Identities=18% Similarity=0.178 Sum_probs=69.4
Q ss_pred CCCc-EEEEEcCCCCChhhHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHH-HHHhC-CCCCcEEEE
Q 025845 7 MEEK-HFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLME-VLASL-PAEEKVILV 83 (247)
Q Consensus 7 ~~~~-~iv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~-~i~~l-~~~~~~~lv 83 (247)
++|. -|+++-|..|-.+. .-....+. .||.|+.++.||++.|.+.+-.. .-..-++.+.+ .|+.| ...++++|.
T Consensus 240 ~ngq~LvIC~EGNAGFYEv-G~m~tP~~-lgYsvLGwNhPGFagSTG~P~p~-n~~nA~DaVvQfAI~~Lgf~~edIily 316 (517)
T KOG1553|consen 240 GNGQDLVICFEGNAGFYEV-GVMNTPAQ-LGYSVLGWNHPGFAGSTGLPYPV-NTLNAADAVVQFAIQVLGFRQEDIILY 316 (517)
T ss_pred CCCceEEEEecCCccceEe-eeecChHH-hCceeeccCCCCccccCCCCCcc-cchHHHHHHHHHHHHHcCCCccceEEE
Confidence 3444 45666665543221 11223344 68999999999999998766332 22333344443 34555 245899999
Q ss_pred EEehhHHHHHHHHHhCCCccceEEEEecc
Q 025845 84 GHSLGGVTLALAADKFPHKISVAVFVTAF 112 (247)
Q Consensus 84 GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 112 (247)
|+|.||..+.++|..||+ |+++|+=+++
T Consensus 317 gWSIGGF~~~waAs~YPd-VkavvLDAtF 344 (517)
T KOG1553|consen 317 GWSIGGFPVAWAASNYPD-VKAVVLDATF 344 (517)
T ss_pred EeecCCchHHHHhhcCCC-ceEEEeecch
Confidence 999999999999999997 9999987775
No 134
>PRK04940 hypothetical protein; Provisional
Probab=98.73 E-value=1e-07 Score=67.74 Aligned_cols=85 Identities=14% Similarity=0.154 Sum_probs=53.7
Q ss_pred EEEEcCCCCChhh--HHHHH-HHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhC-C--CCCcEEEEEE
Q 025845 12 FVLVHGVNHGAWC--WYKLK-ARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASL-P--AEEKVILVGH 85 (247)
Q Consensus 12 iv~lhG~~~~~~~--~~~~~-~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l-~--~~~~~~lvGh 85 (247)
|+++|||.++... .+-.. ..+ ..+++++ +++ .....+..+.+.+++..+ . ..+++.|||+
T Consensus 2 IlYlHGF~SS~~S~~~Ka~~l~~~-~p~~~~~--~l~-----------~~~P~~a~~~l~~~i~~~~~~~~~~~~~liGS 67 (180)
T PRK04940 2 IIYLHGFDSTSPGNHEKVLQLQFI-DPDVRLI--SYS-----------TLHPKHDMQHLLKEVDKMLQLSDDERPLICGV 67 (180)
T ss_pred EEEeCCCCCCCCccHHHHHhheee-CCCCeEE--ECC-----------CCCHHHHHHHHHHHHHHhhhccCCCCcEEEEe
Confidence 7999999988776 43211 122 2234444 322 123444445555555542 1 1258999999
Q ss_pred ehhHHHHHHHHHhCCCccceEEEEeccC
Q 025845 86 SLGGVTLALAADKFPHKISVAVFVTAFM 113 (247)
Q Consensus 86 S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 113 (247)
|+||+.|..+|.++. + +.|+++|..
T Consensus 68 SLGGyyA~~La~~~g--~-~aVLiNPAv 92 (180)
T PRK04940 68 GLGGYWAERIGFLCG--I-RQVIFNPNL 92 (180)
T ss_pred ChHHHHHHHHHHHHC--C-CEEEECCCC
Confidence 999999999999985 3 567788864
No 135
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.72 E-value=9.9e-08 Score=80.60 Aligned_cols=117 Identities=15% Similarity=0.124 Sum_probs=72.0
Q ss_pred CCCCcEEEEEcCCCCChhhHHHHHHHHHh----------------CCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHH
Q 025845 6 GMEEKHFVLVHGVNHGAWCWYKLKARLVA----------------GGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLME 69 (247)
Q Consensus 6 ~~~~~~iv~lhG~~~~~~~~~~~~~~l~~----------------~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~ 69 (247)
..+|-||+|++|..|+..+-+.++..... ..|+..++|+-+-- ..-...+..+.++-+.+
T Consensus 86 elsGIPVLFIPGNAGSyKQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnEe~----tAm~G~~l~dQtEYV~d 161 (973)
T KOG3724|consen 86 ELSGIPVLFIPGNAGSYKQVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNEEF----TAMHGHILLDQTEYVND 161 (973)
T ss_pred cCCCceEEEecCCCCchHHHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccchh----hhhccHhHHHHHHHHHH
Confidence 35678999999999999888777765541 23677777776410 00011244555544444
Q ss_pred HHHh---C-CC--------CCcEEEEEEehhHHHHHHHHH---hCCCccceEEEEeccCCCCCCChHHHHHH
Q 025845 70 VLAS---L-PA--------EEKVILVGHSLGGVTLALAAD---KFPHKISVAVFVTAFMPDTTHRPSFVLEQ 126 (247)
Q Consensus 70 ~i~~---l-~~--------~~~~~lvGhS~Gg~ia~~~a~---~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 126 (247)
.|+. + .+ ...++||||||||++|...+. ..++.|+-++-.+++-..+....++.+..
T Consensus 162 AIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITlssPH~a~Pl~~D~~l~~ 233 (973)
T KOG3724|consen 162 AIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLSSPHAAPPLPLDRFLLR 233 (973)
T ss_pred HHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhcCcccCCCCCCcHHHHH
Confidence 4432 2 11 345999999999999987764 23556777887777544444333334333
No 136
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=98.72 E-value=5.3e-08 Score=72.53 Aligned_cols=163 Identities=13% Similarity=0.078 Sum_probs=80.6
Q ss_pred CCcEEEEEcCCCCChhhHHHHHHHHHh---C-CcEEEEecCCCC-----CCCCC------------cc----------cC
Q 025845 8 EEKHFVLVHGVNHGAWCWYKLKARLVA---G-GHRVTAVDLAAS-----GINMK------------RI----------ED 56 (247)
Q Consensus 8 ~~~~iv~lhG~~~~~~~~~~~~~~l~~---~-g~~vi~~D~~G~-----G~S~~------------~~----------~~ 56 (247)
.++.|++|||++.|+..|+.....|.+ + ++.++.+|=|-- |.... +. ..
T Consensus 3 ~k~riLcLHG~~~na~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~ 82 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDHE 82 (212)
T ss_dssp ---EEEEE--TT--HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SGG
T ss_pred CCceEEEeCCCCcCHHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCccc
Confidence 578999999999999998755554433 2 689998886521 11110 00 01
Q ss_pred ccCHHHhHHHHHHHHHhCCCCCcEEEEEEehhHHHHHHHHHhC----C----CccceEEEEeccCCCCCCChHHHHHHHH
Q 025845 57 VHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGVTLALAADKF----P----HKISVAVFVTAFMPDTTHRPSFVLEQYS 128 (247)
Q Consensus 57 ~~~~~~~~~~l~~~i~~l~~~~~~~lvGhS~Gg~ia~~~a~~~----p----~~v~~lvl~~~~~~~~~~~~~~~~~~~~ 128 (247)
...+++-.+.+.+.++.. + .=.-++|+|.||.+|..++... + ..++-+|+++++.+....
T Consensus 83 ~~~~~~sl~~l~~~i~~~-G-PfdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~---------- 150 (212)
T PF03959_consen 83 YEGLDESLDYLRDYIEEN-G-PFDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPD---------- 150 (212)
T ss_dssp G---HHHHHHHHHHHHHH-----SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE-----------
T ss_pred ccCHHHHHHHHHHHHHhc-C-CeEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchh----------
Confidence 234556666666666665 2 1345999999999998877532 1 135566666654221000
Q ss_pred HhhcCCCCcccccccccccCCCCcccceeechhhHHHHHhcCCCcchhhhhhhhhcccchhHHhhhhhhccchhHHHHHH
Q 025845 129 EKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFLTIKIYQLCPPEVINLLRITFIGRAIVLRQIVSYLYLDSDTMQIML 208 (247)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~D~~~p~~~~ 208 (247)
.........++++.+-..|++|.+++.+.+
T Consensus 151 --------------------------------------------------~~~~~~~~~i~iPtlHv~G~~D~~~~~~~s 180 (212)
T PF03959_consen 151 --------------------------------------------------YQELYDEPKISIPTLHVIGENDPVVPPERS 180 (212)
T ss_dssp --------------------------------------------------GTTTT--TT---EEEEEEETT-SSS-HHHH
T ss_pred --------------------------------------------------hhhhhccccCCCCeEEEEeCCCCCcchHHH
Confidence 000002233455555566999999999998
Q ss_pred HHHHHhhcCC-cceeeecCCCcccccc
Q 025845 209 NFIIIIIITT-HMSELINCSRRAFFLY 234 (247)
Q Consensus 209 ~~~~~~~~~~-~~~~~i~~~gH~~~~e 234 (247)
+.+. +...+ .+++..+ +||.....
T Consensus 181 ~~L~-~~~~~~~~v~~h~-gGH~vP~~ 205 (212)
T PF03959_consen 181 EALA-EMFDPDARVIEHD-GGHHVPRK 205 (212)
T ss_dssp HHHH-HHHHHHEEEEEES-SSSS----
T ss_pred HHHH-HhccCCcEEEEEC-CCCcCcCC
Confidence 8888 77666 6666665 57875544
No 137
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=98.71 E-value=4.7e-08 Score=69.76 Aligned_cols=103 Identities=17% Similarity=0.158 Sum_probs=66.8
Q ss_pred CCCCcEEEEEcCCC---CChhh-HHHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCCcEE
Q 025845 6 GMEEKHFVLVHGVN---HGAWC-WYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVI 81 (247)
Q Consensus 6 ~~~~~~iv~lhG~~---~~~~~-~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~ 81 (247)
..+.+..||+||.. ++... ....-..+. +||+|..+++ +.+.....-.-++.++..-+.-+++.....+.+.
T Consensus 64 ~~~~klfIfIHGGYW~~g~rk~clsiv~~a~~-~gY~vasvgY---~l~~q~htL~qt~~~~~~gv~filk~~~n~k~l~ 139 (270)
T KOG4627|consen 64 TNQAKLFIFIHGGYWQEGDRKMCLSIVGPAVR-RGYRVASVGY---NLCPQVHTLEQTMTQFTHGVNFILKYTENTKVLT 139 (270)
T ss_pred CCCccEEEEEecchhhcCchhcccchhhhhhh-cCeEEEEecc---CcCcccccHHHHHHHHHHHHHHHHHhcccceeEE
Confidence 34567899999973 33333 334444444 8999999865 3443321111245555555555666665667788
Q ss_pred EEEEehhHHHHHHHHHh-CCCccceEEEEecc
Q 025845 82 LVGHSLGGVTLALAADK-FPHKISVAVFVTAF 112 (247)
Q Consensus 82 lvGhS~Gg~ia~~~a~~-~p~~v~~lvl~~~~ 112 (247)
+-|||-|+.+|+.+..+ +..||.++++.++.
T Consensus 140 ~gGHSaGAHLa~qav~R~r~prI~gl~l~~Gv 171 (270)
T KOG4627|consen 140 FGGHSAGAHLAAQAVMRQRSPRIWGLILLCGV 171 (270)
T ss_pred EcccchHHHHHHHHHHHhcCchHHHHHHHhhH
Confidence 88999999999888765 45578888877764
No 138
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=98.69 E-value=1.5e-07 Score=68.86 Aligned_cols=79 Identities=14% Similarity=0.143 Sum_probs=54.9
Q ss_pred CCcEEEEEcCCCCChhhHHHHHHHHHhCCcE-EEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCCcEEEEEEe
Q 025845 8 EEKHFVLVHGVNHGAWCWYKLKARLVAGGHR-VTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHS 86 (247)
Q Consensus 8 ~~~~iv~lhG~~~~~~~~~~~~~~l~~~g~~-vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~lvGhS 86 (247)
++..|||+.|++++...+.++.. . .+|. ++++|++-. +++. + +...+++.|||+|
T Consensus 10 ~~~LilfF~GWg~d~~~f~hL~~--~-~~~D~l~~yDYr~l-----------~~d~---~-------~~~y~~i~lvAWS 65 (213)
T PF04301_consen 10 GKELILFFAGWGMDPSPFSHLIL--P-ENYDVLICYDYRDL-----------DFDF---D-------LSGYREIYLVAWS 65 (213)
T ss_pred CCeEEEEEecCCCChHHhhhccC--C-CCccEEEEecCccc-----------cccc---c-------cccCceEEEEEEe
Confidence 45789999999999999987642 2 2344 456888722 2211 1 2256799999999
Q ss_pred hhHHHHHHHHHhCCCccceEEEEecc
Q 025845 87 LGGVTLALAADKFPHKISVAVFVTAF 112 (247)
Q Consensus 87 ~Gg~ia~~~a~~~p~~v~~lvl~~~~ 112 (247)
||-.+|..+....| +++.|.+++.
T Consensus 66 mGVw~A~~~l~~~~--~~~aiAINGT 89 (213)
T PF04301_consen 66 MGVWAANRVLQGIP--FKRAIAINGT 89 (213)
T ss_pred HHHHHHHHHhccCC--cceeEEEECC
Confidence 99999988766543 5666666664
No 139
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=98.67 E-value=3.9e-07 Score=70.44 Aligned_cols=90 Identities=18% Similarity=0.130 Sum_probs=65.1
Q ss_pred CCCcEEEEEcCCCCChhhH-------HHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCC----
Q 025845 7 MEEKHFVLVHGVNHGAWCW-------YKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLP---- 75 (247)
Q Consensus 7 ~~~~~iv~lhG~~~~~~~~-------~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~---- 75 (247)
.+...+++..|.++..+.- ..+.....+.+-+|+.+++||.|.|.+.. +.++++++..+.++.|.
T Consensus 135 ~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~~----s~~dLv~~~~a~v~yL~d~~~ 210 (365)
T PF05677_consen 135 KPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTGPP----SRKDLVKDYQACVRYLRDEEQ 210 (365)
T ss_pred CCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCCCC----CHHHHHHHHHHHHHHHHhccc
Confidence 4556899999988765551 11222222356899999999999997765 45777777777666661
Q ss_pred --CCCcEEEEEEehhHHHHHHHHHhCC
Q 025845 76 --AEEKVILVGHSLGGVTLALAADKFP 100 (247)
Q Consensus 76 --~~~~~~lvGhS~Gg~ia~~~a~~~p 100 (247)
+.+++.+.|||+||.++.+++.++.
T Consensus 211 G~ka~~Ii~yG~SLGG~Vqa~AL~~~~ 237 (365)
T PF05677_consen 211 GPKAKNIILYGHSLGGGVQAEALKKEV 237 (365)
T ss_pred CCChheEEEeeccccHHHHHHHHHhcc
Confidence 3479999999999999988776653
No 140
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=98.60 E-value=3.3e-07 Score=65.38 Aligned_cols=96 Identities=18% Similarity=0.192 Sum_probs=73.8
Q ss_pred EEEEEcCCCCChhhHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhC---CCCCcEEEEEEeh
Q 025845 11 HFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASL---PAEEKVILVGHSL 87 (247)
Q Consensus 11 ~iv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l---~~~~~~~lvGhS~ 87 (247)
.+||+-|=+|=...=..+++.|+++|+.|+.+|-+-+-.+. -+.++.++|+..+|++. -+.+++.|||+|+
T Consensus 4 ~~v~~SGDgGw~~~d~~~a~~l~~~G~~VvGvdsl~Yfw~~------rtP~~~a~Dl~~~i~~y~~~w~~~~vvLiGYSF 77 (192)
T PF06057_consen 4 LAVFFSGDGGWRDLDKQIAEALAKQGVPVVGVDSLRYFWSE------RTPEQTAADLARIIRHYRARWGRKRVVLIGYSF 77 (192)
T ss_pred EEEEEeCCCCchhhhHHHHHHHHHCCCeEEEechHHHHhhh------CCHHHHHHHHHHHHHHHHHHhCCceEEEEeecC
Confidence 56788887665444467889999999999999976544432 36677788887777665 1678999999999
Q ss_pred hHHHHHHHHHhCC----CccceEEEEecc
Q 025845 88 GGVTLALAADKFP----HKISVAVFVTAF 112 (247)
Q Consensus 88 Gg~ia~~~a~~~p----~~v~~lvl~~~~ 112 (247)
|+-+.-....+.| ++|+.++|+++.
T Consensus 78 GADvlP~~~nrLp~~~r~~v~~v~Ll~p~ 106 (192)
T PF06057_consen 78 GADVLPFIYNRLPAALRARVAQVVLLSPS 106 (192)
T ss_pred CchhHHHHHhhCCHHHHhheeEEEEeccC
Confidence 9988777776766 478999999875
No 141
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=98.57 E-value=7e-07 Score=74.05 Aligned_cols=106 Identities=16% Similarity=0.141 Sum_probs=74.6
Q ss_pred CCCcEEEEEcCCCCChhhHHHHHH------------------HHHhCCcEEEEecCC-CCCCCCCccc-CccCHHHhHHH
Q 025845 7 MEEKHFVLVHGVNHGAWCWYKLKA------------------RLVAGGHRVTAVDLA-ASGINMKRIE-DVHTFHAYSEP 66 (247)
Q Consensus 7 ~~~~~iv~lhG~~~~~~~~~~~~~------------------~l~~~g~~vi~~D~~-G~G~S~~~~~-~~~~~~~~~~~ 66 (247)
.+.|.|++++|.+|.+..+..+.+ .+. +...++.+|.| |+|.|..... ...+.++.++|
T Consensus 75 ~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~-~~~~~l~iDqP~G~G~S~~~~~~~~~~~~~~a~d 153 (462)
T PTZ00472 75 PEAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWN-NEAYVIYVDQPAGVGFSYADKADYDHNESEVSED 153 (462)
T ss_pred CCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCcccc-cccCeEEEeCCCCcCcccCCCCCCCCChHHHHHH
Confidence 456899999999888776533220 122 22689999986 8888865432 23466888999
Q ss_pred HHHHHHhC----C--CCCcEEEEEEehhHHHHHHHHHhC---C-------CccceEEEEeccC
Q 025845 67 LMEVLASL----P--AEEKVILVGHSLGGVTLALAADKF---P-------HKISVAVFVTAFM 113 (247)
Q Consensus 67 l~~~i~~l----~--~~~~~~lvGhS~Gg~ia~~~a~~~---p-------~~v~~lvl~~~~~ 113 (247)
+.++++.+ + ...+++|+|||+||..+-.+|.+. . -.++++++-++..
T Consensus 154 ~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg~~ 216 (462)
T PTZ00472 154 MYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNGLT 216 (462)
T ss_pred HHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEecccc
Confidence 99888843 1 458999999999999887776542 1 1367888877753
No 142
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.57 E-value=7.3e-07 Score=69.36 Aligned_cols=105 Identities=18% Similarity=0.178 Sum_probs=69.3
Q ss_pred CCCcEEEEEcCCCCChhh-HHHHHHHHHhCC--cEEEEecCCCCCCCCCcc----cCccCHHHhHHHHHHHHHhCCCCCc
Q 025845 7 MEEKHFVLVHGVNHGAWC-WYKLKARLVAGG--HRVTAVDLAASGINMKRI----EDVHTFHAYSEPLMEVLASLPAEEK 79 (247)
Q Consensus 7 ~~~~~iv~lhG~~~~~~~-~~~~~~~l~~~g--~~vi~~D~~G~G~S~~~~----~~~~~~~~~~~~l~~~i~~l~~~~~ 79 (247)
..+..+||+||+.-+-.. -...++-..+.| ...+.+.||..|.--.-. ...++-.++..-|..+.... ..++
T Consensus 114 ~~k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~-~~~~ 192 (377)
T COG4782 114 SAKTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDK-PVKR 192 (377)
T ss_pred CCCeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCC-CCce
Confidence 456789999999876554 445555444433 578889999776432111 11245555555555555555 6899
Q ss_pred EEEEEEehhHHHHHHHHHhC--------CCccceEEEEecc
Q 025845 80 VILVGHSLGGVTLALAADKF--------PHKISVAVFVTAF 112 (247)
Q Consensus 80 ~~lvGhS~Gg~ia~~~a~~~--------p~~v~~lvl~~~~ 112 (247)
++|++||||..++++...+. +.+++-+|+-++-
T Consensus 193 I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPD 233 (377)
T COG4782 193 IYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPD 233 (377)
T ss_pred EEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCC
Confidence 99999999999999887642 3457778876653
No 143
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=98.54 E-value=7.2e-08 Score=71.74 Aligned_cols=50 Identities=32% Similarity=0.465 Sum_probs=38.6
Q ss_pred hHHHHHHHHHhCCC--CCcEEEEEEehhHHHHHHHHHhCCCccceEEEEeccC
Q 025845 63 YSEPLMEVLASLPA--EEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFM 113 (247)
Q Consensus 63 ~~~~l~~~i~~l~~--~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 113 (247)
+.++..+++...+. .+++.|+|.|.||-+|+.+|..+| .|+.+|.+++..
T Consensus 5 yfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~ 56 (213)
T PF08840_consen 5 YFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSS 56 (213)
T ss_dssp HHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--S
T ss_pred HHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCce
Confidence 44555566666533 369999999999999999999999 799999998863
No 144
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=98.54 E-value=4.6e-07 Score=70.95 Aligned_cols=208 Identities=16% Similarity=0.056 Sum_probs=112.2
Q ss_pred CCcEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEecCCC--CCCCCCccc------------CccCHHHhHHHHHHH---
Q 025845 8 EEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAA--SGINMKRIE------------DVHTFHAYSEPLMEV--- 70 (247)
Q Consensus 8 ~~~~iv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G--~G~S~~~~~------------~~~~~~~~~~~l~~~--- 70 (247)
.-|.||+-||.+++...|..+++.+++.||-|.++|.|| .|..+.... ...++....+.+.+.
T Consensus 70 ~~PlvvlshG~Gs~~~~f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~~~s 149 (365)
T COG4188 70 LLPLVVLSHGSGSYVTGFAWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDALLQLTAS 149 (365)
T ss_pred cCCeEEecCCCCCCccchhhhHHHHhhCceEEEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHHHHHhhcC
Confidence 568999999999999999999999999999999999999 333332111 112333333333333
Q ss_pred --H-HhCCCCCcEEEEEEehhHHHHHHHHHhCCCccceEEEEec----cCCCCCCChHHHHHHHHHhhcCCCCccccccc
Q 025845 71 --L-ASLPAEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTA----FMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQF 143 (247)
Q Consensus 71 --i-~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (247)
+ .++ +..++.++|||+||..+|+.+....+......-+.. .......... .... ....|+....
T Consensus 150 P~l~~~l-d~~~Vgv~GhS~GG~T~m~laGA~~~~~~~~~~C~~~~~~~~~~~~~~~~-~l~q-------~~av~~~~~~ 220 (365)
T COG4188 150 PALAGRL-DPQRVGVLGHSFGGYTAMELAGAELDAEALLQHCESASRICLDPPGLNGR-LLNQ-------CAAVWLPRQA 220 (365)
T ss_pred ccccccc-CccceEEEecccccHHHHHhccccccHHHHHHHhhhhhhcccCCCCcChh-hhcc-------ccccccchhh
Confidence 1 112 456899999999999999988654331100000000 0000011100 0000 0011111000
Q ss_pred ccccCCCCcccceeechhhHHHHHhcCCCcchhhhhhhhhcccchhHHhhhhhhccchhHHHHHHHHHHHhhcCCc--ce
Q 025845 144 SQCDASNPSHISMLFGREFLTIKIYQLCPPEVINLLRITFIGRAIVLRQIVSYLYLDSDTMQIMLNFIIIIIITTH--MS 221 (247)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~D~~~p~~~~~~~~~~~~~~~--~~ 221 (247)
. ......++..+..... ...............+..+..|..|.+.|.......-...+++. -+
T Consensus 221 ~------------~~rDpriravvA~~p~---~~~~Fg~tgl~~v~~P~~~~a~s~D~~aP~~~~~~~~f~~l~g~~k~~ 285 (365)
T COG4188 221 Y------------DLRDPRIRAVVAINPA---LGMIFGTTGLVKVTDPVLLAAGSADGFAPPVTEQIRPFGYLPGALKYL 285 (365)
T ss_pred h------------ccccccceeeeeccCC---cccccccccceeeecceeeecccccccCCcccccccccccCCcchhhe
Confidence 0 0000001111100000 01111122333445555566688888777776554432566776 68
Q ss_pred eeecCCCccccccChhhH
Q 025845 222 ELINCSRRAFFLYHNTLF 239 (247)
Q Consensus 222 ~~i~~~gH~~~~e~p~~~ 239 (247)
..++++.|+.++|-.+++
T Consensus 286 ~~vp~a~h~sfl~~~~~~ 303 (365)
T COG4188 286 RLVPGATHFSFLELCKEG 303 (365)
T ss_pred eecCCCccccccccCccc
Confidence 999999999999988774
No 145
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.51 E-value=1.9e-06 Score=65.27 Aligned_cols=104 Identities=16% Similarity=0.169 Sum_probs=73.8
Q ss_pred CcEEEEEcCCCCChhhHHHHH--HHHHh-CCcEEEEecC-------CCCCCCCCccc---CccCHHHhHHHHHHHHHhCC
Q 025845 9 EKHFVLVHGVNHGAWCWYKLK--ARLVA-GGHRVTAVDL-------AASGINMKRIE---DVHTFHAYSEPLMEVLASLP 75 (247)
Q Consensus 9 ~~~iv~lhG~~~~~~~~~~~~--~~l~~-~g~~vi~~D~-------~G~G~S~~~~~---~~~~~~~~~~~l~~~i~~l~ 75 (247)
.|.||.+||-.++........ +.|++ .||-|+.+|- .++|.+..+.+ ...+...+.+-+..+..+.
T Consensus 61 apLvv~LHG~~~sgag~~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~p~~~~~g~ddVgflr~lva~l~~~~- 139 (312)
T COG3509 61 APLVVVLHGSGGSGAGQLHGTGWDALADREGFLVAYPDGYDRAWNANGCGNWFGPADRRRGVDDVGFLRALVAKLVNEY- 139 (312)
T ss_pred CCEEEEEecCCCChHHhhcccchhhhhcccCcEEECcCccccccCCCcccccCCcccccCCccHHHHHHHHHHHHHHhc-
Confidence 368899999999887654444 44443 6899999853 23444422221 2234455555555666665
Q ss_pred CCC--cEEEEEEehhHHHHHHHHHhCCCccceEEEEeccC
Q 025845 76 AEE--KVILVGHSLGGVTLALAADKFPHKISVAVFVTAFM 113 (247)
Q Consensus 76 ~~~--~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 113 (247)
+++ +|++.|.|-||.++..++..+|+...++..+++..
T Consensus 140 gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 140 GIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred CcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 554 99999999999999999999999999999888865
No 146
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=98.51 E-value=6.2e-07 Score=72.87 Aligned_cols=81 Identities=21% Similarity=0.259 Sum_probs=58.7
Q ss_pred hHHHHHHHHHhCCcE-----EEE-ecCCCCCCCCCcccCccCHHHhHHHHHHHHHhC--CCCCcEEEEEEehhHHHHHHH
Q 025845 24 CWYKLKARLVAGGHR-----VTA-VDLAASGINMKRIEDVHTFHAYSEPLMEVLASL--PAEEKVILVGHSLGGVTLALA 95 (247)
Q Consensus 24 ~~~~~~~~l~~~g~~-----vi~-~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l--~~~~~~~lvGhS~Gg~ia~~~ 95 (247)
.|.++++.|.+.||. ..+ +|+|- |. ...+++...+.++|+.. ...++++||||||||.++..+
T Consensus 66 ~~~~li~~L~~~GY~~~~~l~~~pYDWR~---~~------~~~~~~~~~lk~~ie~~~~~~~~kv~li~HSmGgl~~~~f 136 (389)
T PF02450_consen 66 YFAKLIENLEKLGYDRGKDLFAAPYDWRL---SP------AERDEYFTKLKQLIEEAYKKNGKKVVLIAHSMGGLVARYF 136 (389)
T ss_pred hHHHHHHHHHhcCcccCCEEEEEeechhh---ch------hhHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCchHHHHH
Confidence 699999999987764 223 78882 11 12345555566555544 136899999999999999999
Q ss_pred HHhCCC------ccceEEEEeccC
Q 025845 96 ADKFPH------KISVAVFVTAFM 113 (247)
Q Consensus 96 a~~~p~------~v~~lvl~~~~~ 113 (247)
....+. .|+++|.++++.
T Consensus 137 l~~~~~~~W~~~~i~~~i~i~~p~ 160 (389)
T PF02450_consen 137 LQWMPQEEWKDKYIKRFISIGTPF 160 (389)
T ss_pred HHhccchhhHHhhhhEEEEeCCCC
Confidence 887743 599999999853
No 147
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=98.51 E-value=8e-06 Score=64.46 Aligned_cols=109 Identities=21% Similarity=0.200 Sum_probs=75.2
Q ss_pred CCCcEEEEEcCCC---C--ChhhHHHHHHHHHh-CCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHh-----CC
Q 025845 7 MEEKHFVLVHGVN---H--GAWCWYKLKARLVA-GGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLAS-----LP 75 (247)
Q Consensus 7 ~~~~~iv~lhG~~---~--~~~~~~~~~~~l~~-~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~-----l~ 75 (247)
...|.|||+||.| + ....++.+...+++ .+.-|+.+|+|= .+... .+..+++-.+.+.-+.++ --
T Consensus 88 ~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRL---APEh~-~Pa~y~D~~~Al~w~~~~~~~~~~~ 163 (336)
T KOG1515|consen 88 TKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRL---APEHP-FPAAYDDGWAALKWVLKNSWLKLGA 163 (336)
T ss_pred cCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCccc---CCCCC-CCccchHHHHHHHHHHHhHHHHhCC
Confidence 4568999999986 3 35568888888744 568899999983 32222 123455555555554443 23
Q ss_pred CCCcEEEEEEehhHHHHHHHHHhC------CCccceEEEEeccCCCCCCC
Q 025845 76 AEEKVILVGHSLGGVTLALAADKF------PHKISVAVFVTAFMPDTTHR 119 (247)
Q Consensus 76 ~~~~~~lvGhS~Gg~ia~~~a~~~------p~~v~~lvl~~~~~~~~~~~ 119 (247)
+.+++.|+|-|-||.+|..+|.+. +-++++.|++-|........
T Consensus 164 D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~~~ 213 (336)
T KOG1515|consen 164 DPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTDRT 213 (336)
T ss_pred CcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCCCC
Confidence 668999999999999998887642 35799999999965444333
No 148
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=98.46 E-value=5.2e-07 Score=69.11 Aligned_cols=106 Identities=14% Similarity=0.090 Sum_probs=64.1
Q ss_pred CCCcEEEEEcCCCCChhhH--HHHHHHHHhCC----cEEEEecCCCCCCC--CCc---------c--cCccC-HHHhHHH
Q 025845 7 MEEKHFVLVHGVNHGAWCW--YKLKARLVAGG----HRVTAVDLAASGIN--MKR---------I--EDVHT-FHAYSEP 66 (247)
Q Consensus 7 ~~~~~iv~lhG~~~~~~~~--~~~~~~l~~~g----~~vi~~D~~G~G~S--~~~---------~--~~~~~-~~~~~~~ 66 (247)
..-|.|+++||.......+ ...++.+.+.+ .-+|+++..+.+.. ... . ..... .+.+.++
T Consensus 22 ~~~PvlylldG~~~~~~~~~~~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~e 101 (251)
T PF00756_consen 22 KPYPVLYLLDGQSGWFRNGNAQEALDRLIAEGKIPPMIIVVIPNGDNSRFYTSWYLPAGSSRRADDSGGGDAYETFLTEE 101 (251)
T ss_dssp TTEEEEEEESHTTHHHHHHHHHHHHHHHHHHHTSEEEEEEEEESSSTSSTTSBTTSSBCTTCBCTSTTTHHHHHHHHHTH
T ss_pred CCCEEEEEccCCccccccchHHHHHHHHHHhCCCCceEEEEEecccccccccccccccccccccccCCCCcccceehhcc
Confidence 3447899999972222222 23333333322 23556665554411 100 0 00112 2345567
Q ss_pred HHHHHHhCCCC--CcEEEEEEehhHHHHHHHHHhCCCccceEEEEecc
Q 025845 67 LMEVLASLPAE--EKVILVGHSLGGVTLALAADKFPHKISVAVFVTAF 112 (247)
Q Consensus 67 l~~~i~~l~~~--~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 112 (247)
|...|+..... ++..++|+||||..|+.++.++|+.+.+++.+++.
T Consensus 102 l~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~ 149 (251)
T PF00756_consen 102 LIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGA 149 (251)
T ss_dssp HHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEE
T ss_pred chhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCcc
Confidence 77776654222 22799999999999999999999999999999975
No 149
>PLN02606 palmitoyl-protein thioesterase
Probab=98.43 E-value=5.3e-06 Score=63.73 Aligned_cols=101 Identities=17% Similarity=0.119 Sum_probs=68.6
Q ss_pred CCcEEEEEcCCC--CChhhHHHHHHHHHh-CCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCC-CCcEEEE
Q 025845 8 EEKHFVLVHGVN--HGAWCWYKLKARLVA-GGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPA-EEKVILV 83 (247)
Q Consensus 8 ~~~~iv~lhG~~--~~~~~~~~~~~~l~~-~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~-~~~~~lv 83 (247)
+..|||+.||++ .+...+..+.+.+.+ .++.+..+- .|-+... .-.....+.++.+.+.+..... .+-+++|
T Consensus 25 ~~~PvViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~-ig~~~~~---s~~~~~~~Qv~~vce~l~~~~~L~~G~naI 100 (306)
T PLN02606 25 LSVPFVLFHGFGGECSNGKVSNLTQFLINHSGYPGTCVE-IGNGVQD---SLFMPLRQQASIACEKIKQMKELSEGYNIV 100 (306)
T ss_pred CCCCEEEECCCCcccCCchHHHHHHHHHhCCCCCeEEEE-ECCCccc---ccccCHHHHHHHHHHHHhcchhhcCceEEE
Confidence 457999999999 445567888887753 366555544 3322211 1113555666666555554311 2479999
Q ss_pred EEehhHHHHHHHHHhCCC--ccceEEEEecc
Q 025845 84 GHSLGGVTLALAADKFPH--KISVAVFVTAF 112 (247)
Q Consensus 84 GhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~ 112 (247)
|+|.||.++..++.+.|+ .|+.+|-+++.
T Consensus 101 GfSQGglflRa~ierc~~~p~V~nlISlggp 131 (306)
T PLN02606 101 AESQGNLVARGLIEFCDNAPPVINYVSLGGP 131 (306)
T ss_pred EEcchhHHHHHHHHHCCCCCCcceEEEecCC
Confidence 999999999999999987 59999999884
No 150
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=98.43 E-value=3.3e-06 Score=69.99 Aligned_cols=109 Identities=19% Similarity=0.115 Sum_probs=70.0
Q ss_pred CCCCcEEEEEcCCCCChhhH--HHHHHHHHh-CCcEEEEecCCCCCCCCCccc------CccCHHHhHHHHHHHHHhCC-
Q 025845 6 GMEEKHFVLVHGVNHGAWCW--YKLKARLVA-GGHRVTAVDLAASGINMKRIE------DVHTFHAYSEPLMEVLASLP- 75 (247)
Q Consensus 6 ~~~~~~iv~lhG~~~~~~~~--~~~~~~l~~-~g~~vi~~D~~G~G~S~~~~~------~~~~~~~~~~~l~~~i~~l~- 75 (247)
++.+|.+|++.|=+.-...| ..+...|++ .|--++++..|-+|.|.+... ...|.++..+|+..+++++.
T Consensus 26 ~~~gpifl~~ggE~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~ 105 (434)
T PF05577_consen 26 KPGGPIFLYIGGEGPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKK 105 (434)
T ss_dssp -TTSEEEEEE--SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHH
Confidence 34477777776654322222 223344444 356899999999999976442 34699999999999988761
Q ss_pred -----CCCcEEEEEEehhHHHHHHHHHhCCCccceEEEEeccCC
Q 025845 76 -----AEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMP 114 (247)
Q Consensus 76 -----~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 114 (247)
...|++++|-|+||++|..+-.+||+.|.+.+.-+++..
T Consensus 106 ~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv~ 149 (434)
T PF05577_consen 106 KYNTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPVQ 149 (434)
T ss_dssp HTTTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--CC
T ss_pred hhcCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccceee
Confidence 335899999999999999999999999999998777543
No 151
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=98.37 E-value=1.5e-06 Score=66.20 Aligned_cols=105 Identities=18% Similarity=0.267 Sum_probs=71.7
Q ss_pred CCcEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEecCCCCCCCC------Cccc----------------C---ccCHHH
Q 025845 8 EEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINM------KRIE----------------D---VHTFHA 62 (247)
Q Consensus 8 ~~~~iv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~------~~~~----------------~---~~~~~~ 62 (247)
+=|.+||-||++++...|..+...|+.+||=|.++..|-+-.+- .+.. + ...-++
T Consensus 117 k~PvvvFSHGLggsRt~YSa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~irNeq 196 (399)
T KOG3847|consen 117 KYPVVVFSHGLGGSRTLYSAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFHIRNEQ 196 (399)
T ss_pred CccEEEEecccccchhhHHHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEEeeCHH
Confidence 44889999999999999999999999999999999998654331 1000 0 001111
Q ss_pred ------hHHHHHHHHHhCC-----------------------CCCcEEEEEEehhHHHHHHHHHhCCCccceEEEEeccC
Q 025845 63 ------YSEPLMEVLASLP-----------------------AEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFM 113 (247)
Q Consensus 63 ------~~~~l~~~i~~l~-----------------------~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 113 (247)
-+.....+|+.+. ...++.++|||+||..+......+ .+.+..|+++.+.
T Consensus 197 v~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~-t~FrcaI~lD~WM 275 (399)
T KOG3847|consen 197 VGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSH-TDFRCAIALDAWM 275 (399)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhccc-cceeeeeeeeeee
Confidence 1222223333220 235788999999999888777654 4588888888864
No 152
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=98.36 E-value=4.2e-06 Score=73.36 Aligned_cols=102 Identities=21% Similarity=0.148 Sum_probs=73.5
Q ss_pred cEEEEEcCCCCChh-------hHHHHHHHHHhCCcEEEEecCCCCCCCCCcc-------cCccCHHHhHHHHHHHHHhC-
Q 025845 10 KHFVLVHGVNHGAW-------CWYKLKARLVAGGHRVTAVDLAASGINMKRI-------EDVHTFHAYSEPLMEVLASL- 74 (247)
Q Consensus 10 ~~iv~lhG~~~~~~-------~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~-------~~~~~~~~~~~~l~~~i~~l- 74 (247)
|.+|.+||.+++.. .|..+ .....|+-|+.+|.||.|.....- -....+.+....+..+++..
T Consensus 527 Pllv~~yGGP~sq~v~~~~~~~~~~~--~~s~~g~~v~~vd~RGs~~~G~~~~~~~~~~lG~~ev~D~~~~~~~~~~~~~ 604 (755)
T KOG2100|consen 527 PLLVVVYGGPGSQSVTSKFSVDWNEV--VVSSRGFAVLQVDGRGSGGYGWDFRSALPRNLGDVEVKDQIEAVKKVLKLPF 604 (755)
T ss_pred CEEEEecCCCCcceeeeeEEecHHHH--hhccCCeEEEEEcCCCcCCcchhHHHHhhhhcCCcchHHHHHHHHHHHhccc
Confidence 56788888876322 25544 445578999999999987664331 12346666666666666654
Q ss_pred CCCCcEEEEEEehhHHHHHHHHHhCCCccceE-EEEeccC
Q 025845 75 PAEEKVILVGHSLGGVTLALAADKFPHKISVA-VFVTAFM 113 (247)
Q Consensus 75 ~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~l-vl~~~~~ 113 (247)
-+.+++.+.|+|.||.+++.++...|+.+.++ +.++|..
T Consensus 605 iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVt 644 (755)
T KOG2100|consen 605 IDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVT 644 (755)
T ss_pred ccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEeccee
Confidence 25679999999999999999999998777666 8888753
No 153
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=98.36 E-value=2.5e-05 Score=61.45 Aligned_cols=112 Identities=13% Similarity=0.126 Sum_probs=75.2
Q ss_pred CCCCcEEEEEcCCCCChh---hHHHHHHHHHhCCcEEEEecCCC--CCCCCC----------ccc----Cc---------
Q 025845 6 GMEEKHFVLVHGVNHGAW---CWYKLKARLVAGGHRVTAVDLAA--SGINMK----------RIE----DV--------- 57 (247)
Q Consensus 6 ~~~~~~iv~lhG~~~~~~---~~~~~~~~l~~~g~~vi~~D~~G--~G~S~~----------~~~----~~--------- 57 (247)
+.....||++||.+.+.+ .-.++...|.+.||.++++.+|. ....+. ... ..
T Consensus 84 ~~~~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 163 (310)
T PF12048_consen 84 AKPQGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEEVPSAGDQQLSQPSDEPSPASA 163 (310)
T ss_pred CCCceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCCCCCCCCCcCCCCCCCccccc
Confidence 344559999999998764 46788889999999999999887 111100 000 00
Q ss_pred -------cCHHHhHHHHHHHHHhC--CCCCcEEEEEEehhHHHHHHHHHhCCC-ccceEEEEeccCCCCC
Q 025845 58 -------HTFHAYSEPLMEVLASL--PAEEKVILVGHSLGGVTLALAADKFPH-KISVAVFVTAFMPDTT 117 (247)
Q Consensus 58 -------~~~~~~~~~l~~~i~~l--~~~~~~~lvGhS~Gg~ia~~~a~~~p~-~v~~lvl~~~~~~~~~ 117 (247)
...+.+.+.+.+.+..+ .+.++++||||+.|+..++.+....+. .++++|++++..+...
T Consensus 164 ~~~~~~~~~~~~~~ari~Aa~~~~~~~~~~~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I~a~~p~~~ 233 (310)
T PF12048_consen 164 QEAEAREAYEERLFARIEAAIAFAQQQGGKNIVLIGHGTGAGWAARYLAEKPPPMPDALVLINAYWPQPD 233 (310)
T ss_pred cHhHHhHHHHHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHhcCCCcccCeEEEEeCCCCcch
Confidence 01123333444444333 256679999999999999999887764 5999999999755433
No 154
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=98.34 E-value=2.5e-06 Score=61.45 Aligned_cols=103 Identities=14% Similarity=0.272 Sum_probs=75.2
Q ss_pred cEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEecCCCCCCC-----------------CCcccCccCHHHhHHHHHHHHH
Q 025845 10 KHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGIN-----------------MKRIEDVHTFHAYSEPLMEVLA 72 (247)
Q Consensus 10 ~~iv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S-----------------~~~~~~~~~~~~~~~~l~~~i~ 72 (247)
-+|||+||.+.+...|..+++.|.-++.+-|++.-|-.=.+ +.-..+...+...++-+..+++
T Consensus 4 atIi~LHglGDsg~~~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~Li~ 83 (206)
T KOG2112|consen 4 ATIIFLHGLGDSGSGWAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIANLID 83 (206)
T ss_pred EEEEEEecCCCCCccHHHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHHHHH
Confidence 47999999999999998888887766778888754422111 0001122366667777777777
Q ss_pred hC--C--CCCcEEEEEEehhHHHHHHHHHhCCCccceEEEEecc
Q 025845 73 SL--P--AEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAF 112 (247)
Q Consensus 73 ~l--~--~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 112 (247)
+. . ..+++.+-|.|+||.++++.+..+|..+.+++-.++.
T Consensus 84 ~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~ 127 (206)
T KOG2112|consen 84 NEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGF 127 (206)
T ss_pred HHHHcCCCccceeEcccCchHHHHHHHHhccccccceeeccccc
Confidence 65 1 3467899999999999999999998888887766654
No 155
>COG4099 Predicted peptidase [General function prediction only]
Probab=98.34 E-value=6.4e-06 Score=62.46 Aligned_cols=98 Identities=22% Similarity=0.219 Sum_probs=61.4
Q ss_pred cEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEecCCCCC-------------CCCCcccCccCHHHhHHHHHHHHHhCC-
Q 025845 10 KHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASG-------------INMKRIEDVHTFHAYSEPLMEVLASLP- 75 (247)
Q Consensus 10 ~~iv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G-------------~S~~~~~~~~~~~~~~~~l~~~i~~l~- 75 (247)
|-++|+||.+.....-.. .+. .|..-|+.+.|-.+ .++.. ...-.....+.+.+.+..-.
T Consensus 192 PLvlfLHgagq~g~dn~~---~l~-sg~gaiawa~pedqcfVlAPQy~~if~d~e~~--t~~~l~~~idli~~vlas~yn 265 (387)
T COG4099 192 PLVLFLHGAGQGGSDNDK---VLS-SGIGAIAWAGPEDQCFVLAPQYNPIFADSEEK--TLLYLIEKIDLILEVLASTYN 265 (387)
T ss_pred cEEEEEecCCCCCchhhh---hhh-cCccceeeecccCceEEEcccccccccccccc--cchhHHHHHHHHHHHHhhccC
Confidence 889999999876655332 222 23444444444333 11110 01123333444443333222
Q ss_pred -CCCcEEEEEEehhHHHHHHHHHhCCCccceEEEEeccC
Q 025845 76 -AEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFM 113 (247)
Q Consensus 76 -~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 113 (247)
+..++.++|.|+||+-++.++.++|+...+.+++++..
T Consensus 266 ID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~~ 304 (387)
T COG4099 266 IDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGGG 304 (387)
T ss_pred cccceEEEEeecCcchhhHHHHHhCchhhheeeeecCCC
Confidence 34699999999999999999999999999999998753
No 156
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=98.33 E-value=8.2e-06 Score=66.71 Aligned_cols=107 Identities=13% Similarity=0.198 Sum_probs=65.3
Q ss_pred CCCcEEEEEcCCCCChh-hHHHHHHHHHhCCc----EEEEecCCCC-CCCCCcccCccCHHHhHHHHHHHHHhC----CC
Q 025845 7 MEEKHFVLVHGVNHGAW-CWYKLKARLVAGGH----RVTAVDLAAS-GINMKRIEDVHTFHAYSEPLMEVLASL----PA 76 (247)
Q Consensus 7 ~~~~~iv~lhG~~~~~~-~~~~~~~~l~~~g~----~vi~~D~~G~-G~S~~~~~~~~~~~~~~~~l~~~i~~l----~~ 76 (247)
..-|.|+++||-.-... .....++.|.+.|. -++.+|-.+. .++..-.....-...++++|.-.+++. .+
T Consensus 207 ~~~PvlyllDG~~w~~~~~~~~~ld~li~~g~i~P~ivV~id~~~~~~R~~el~~~~~f~~~l~~eLlP~I~~~y~~~~d 286 (411)
T PRK10439 207 EERPLAILLDGQFWAESMPVWPALDSLTHRGQLPPAVYLLIDAIDTTHRSQELPCNADFWLAVQQELLPQVRAIAPFSDD 286 (411)
T ss_pred CCCCEEEEEECHHhhhcCCHHHHHHHHHHcCCCCceEEEEECCCCcccccccCCchHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 34588999999532111 12233444444442 3567775321 111111101112333456666666654 24
Q ss_pred CCcEEEEEEehhHHHHHHHHHhCCCccceEEEEeccC
Q 025845 77 EEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFM 113 (247)
Q Consensus 77 ~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 113 (247)
.++..|+|+||||+.|+.++.++|+++.+++.+++..
T Consensus 287 ~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ 323 (411)
T PRK10439 287 ADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSF 323 (411)
T ss_pred ccceEEEEEChHHHHHHHHHHhCcccccEEEEeccce
Confidence 4678999999999999999999999999999999853
No 157
>COG3150 Predicted esterase [General function prediction only]
Probab=98.32 E-value=5.7e-06 Score=57.31 Aligned_cols=87 Identities=18% Similarity=0.192 Sum_probs=63.1
Q ss_pred EEEEcCCCCChhhHHHHH--HHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCCcEEEEEEehhH
Q 025845 12 FVLVHGVNHGAWCWYKLK--ARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGG 89 (247)
Q Consensus 12 iv~lhG~~~~~~~~~~~~--~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~lvGhS~Gg 89 (247)
|+++|||-+|....+... +.+. ...+.+.+- -+.. ..+....++.+..++..+ +.+...|||-|+||
T Consensus 2 ilYlHGFnSSP~shka~l~~q~~~-~~~~~i~y~-------~p~l--~h~p~~a~~ele~~i~~~-~~~~p~ivGssLGG 70 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVLLLQFID-EDVRDIEYS-------TPHL--PHDPQQALKELEKAVQEL-GDESPLIVGSSLGG 70 (191)
T ss_pred eEEEecCCCCcccHHHHHHHHHHh-ccccceeee-------cCCC--CCCHHHHHHHHHHHHHHc-CCCCceEEeecchH
Confidence 899999999988876443 3444 333333332 2222 258899999999999999 77779999999999
Q ss_pred HHHHHHHHhCCCccceEEEEecc
Q 025845 90 VTLALAADKFPHKISVAVFVTAF 112 (247)
Q Consensus 90 ~ia~~~a~~~p~~v~~lvl~~~~ 112 (247)
+.|.+++.++. +++++ ++|+
T Consensus 71 Y~At~l~~~~G--irav~-~NPa 90 (191)
T COG3150 71 YYATWLGFLCG--IRAVV-FNPA 90 (191)
T ss_pred HHHHHHHHHhC--Chhhh-cCCC
Confidence 99999998874 55544 4554
No 158
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=98.27 E-value=3.4e-06 Score=64.22 Aligned_cols=105 Identities=15% Similarity=0.154 Sum_probs=59.2
Q ss_pred CCCcEEEEEcCCCCCh---hhHHHHHHHHHh--CCcEEEEecCCCCCCCCCcc-cCccCHHHhHHHHHHHHHhCCC-CCc
Q 025845 7 MEEKHFVLVHGVNHGA---WCWYKLKARLVA--GGHRVTAVDLAASGINMKRI-EDVHTFHAYSEPLMEVLASLPA-EEK 79 (247)
Q Consensus 7 ~~~~~iv~lhG~~~~~---~~~~~~~~~l~~--~g~~vi~~D~~G~G~S~~~~-~~~~~~~~~~~~l~~~i~~l~~-~~~ 79 (247)
++..|||+.||++.+. ..+..+.+.+.+ .|-.|..++. |-+.++... ....++.+.++.+.+.+..-+. .+-
T Consensus 3 ~~~~PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~i-g~~~~~D~~~s~f~~v~~Qv~~vc~~l~~~p~L~~G 81 (279)
T PF02089_consen 3 PSPLPVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEI-GNDPSEDVENSFFGNVNDQVEQVCEQLANDPELANG 81 (279)
T ss_dssp TSS--EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--S-SSSHHHHHHHHHHSHHHHHHHHHHHHHHH-GGGTT-
T ss_pred CCCCcEEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEE-CCCcchhhhhhHHHHHHHHHHHHHHHHhhChhhhcc
Confidence 3456999999999753 346555554443 4667777775 333221111 1113566677777777765411 258
Q ss_pred EEEEEEehhHHHHHHHHHhCCC-ccceEEEEecc
Q 025845 80 VILVGHSLGGVTLALAADKFPH-KISVAVFVTAF 112 (247)
Q Consensus 80 ~~lvGhS~Gg~ia~~~a~~~p~-~v~~lvl~~~~ 112 (247)
+++||+|.||.++..++.++|+ .|+.+|.+++.
T Consensus 82 ~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggp 115 (279)
T PF02089_consen 82 FNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGP 115 (279)
T ss_dssp EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES--
T ss_pred eeeeeeccccHHHHHHHHHCCCCCceeEEEecCc
Confidence 9999999999999999999875 69999999884
No 159
>PLN02633 palmitoyl protein thioesterase family protein
Probab=98.23 E-value=1.4e-05 Score=61.46 Aligned_cols=101 Identities=11% Similarity=0.081 Sum_probs=66.8
Q ss_pred CCcEEEEEcCCCCChhh--HHHHHHHHHh-CCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCC-CCCcEEEE
Q 025845 8 EEKHFVLVHGVNHGAWC--WYKLKARLVA-GGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLP-AEEKVILV 83 (247)
Q Consensus 8 ~~~~iv~lhG~~~~~~~--~~~~~~~l~~-~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~-~~~~~~lv 83 (247)
...|+|+.||+|.+... ...+.+.+.. .|..+.++-. | .+. .........+.++.+.+.+.... -.+-+++|
T Consensus 24 ~~~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i-g--~~~-~~s~~~~~~~Qve~vce~l~~~~~l~~G~naI 99 (314)
T PLN02633 24 VSVPFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI-G--NGV-GDSWLMPLTQQAEIACEKVKQMKELSQGYNIV 99 (314)
T ss_pred CCCCeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEE-C--CCc-cccceeCHHHHHHHHHHHHhhchhhhCcEEEE
Confidence 34699999999876553 4444444433 3566666543 3 221 11112355666666665555431 12479999
Q ss_pred EEehhHHHHHHHHHhCCC--ccceEEEEecc
Q 025845 84 GHSLGGVTLALAADKFPH--KISVAVFVTAF 112 (247)
Q Consensus 84 GhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~ 112 (247)
|+|.||.++..++.+.|+ .|+.+|-+++.
T Consensus 100 GfSQGGlflRa~ierc~~~p~V~nlISlggp 130 (314)
T PLN02633 100 GRSQGNLVARGLIEFCDGGPPVYNYISLAGP 130 (314)
T ss_pred EEccchHHHHHHHHHCCCCCCcceEEEecCC
Confidence 999999999999999987 59999999884
No 160
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=98.23 E-value=1e-05 Score=66.08 Aligned_cols=81 Identities=20% Similarity=0.213 Sum_probs=59.9
Q ss_pred HHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhC----CCCCcEEEEEEehhHHHHHHHHHhCCCc
Q 025845 27 KLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASL----PAEEKVILVGHSLGGVTLALAADKFPHK 102 (247)
Q Consensus 27 ~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l----~~~~~~~lvGhS~Gg~ia~~~a~~~p~~ 102 (247)
.+--.|. .|+.|+.+.+. .. |.+ ..|+++.+.....+++.. ++..+++|||.+.||..++.+|+.+|+.
T Consensus 92 evG~AL~-~GHPvYFV~F~----p~-P~p-gQTl~DV~~ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd~ 164 (581)
T PF11339_consen 92 EVGVALR-AGHPVYFVGFF----PE-PEP-GQTLEDVMRAEAAFVEEVAERHPDAPKPNLIGNCQGGWAAMMLAALRPDL 164 (581)
T ss_pred HHHHHHH-cCCCeEEEEec----CC-CCC-CCcHHHHHHHHHHHHHHHHHhCCCCCCceEEeccHHHHHHHHHHhcCcCc
Confidence 3344566 69999988765 11 222 248888776666666554 3345999999999999999999999999
Q ss_pred cceEEEEeccCC
Q 025845 103 ISVAVFVTAFMP 114 (247)
Q Consensus 103 v~~lvl~~~~~~ 114 (247)
+..+|+.+++..
T Consensus 165 ~gplvlaGaPls 176 (581)
T PF11339_consen 165 VGPLVLAGAPLS 176 (581)
T ss_pred cCceeecCCCcc
Confidence 999999888644
No 161
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=98.15 E-value=5.4e-05 Score=56.67 Aligned_cols=101 Identities=14% Similarity=0.171 Sum_probs=70.9
Q ss_pred CCCCcEEEEEcCCCCChhh--HHHHHHHHHh-CCcEEEEecCCCCC--CCCCcccCccCHHHhHHHHHHHHHhCC-CCCc
Q 025845 6 GMEEKHFVLVHGVNHGAWC--WYKLKARLVA-GGHRVTAVDLAASG--INMKRIEDVHTFHAYSEPLMEVLASLP-AEEK 79 (247)
Q Consensus 6 ~~~~~~iv~lhG~~~~~~~--~~~~~~~l~~-~g~~vi~~D~~G~G--~S~~~~~~~~~~~~~~~~l~~~i~~l~-~~~~ 79 (247)
+.+..|+|++||++.+... +..+.+.+.+ .|..|++.|. |-| .|. .....+.++.+.+.+.... -..-
T Consensus 20 s~s~~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~lei-g~g~~~s~-----l~pl~~Qv~~~ce~v~~m~~lsqG 93 (296)
T KOG2541|consen 20 SPSPVPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEI-GDGIKDSS-----LMPLWEQVDVACEKVKQMPELSQG 93 (296)
T ss_pred CcccCCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEe-cCCcchhh-----hccHHHHHHHHHHHHhcchhccCc
Confidence 3444689999999987766 6666666655 5778888884 444 221 2345555555555554331 1358
Q ss_pred EEEEEEehhHHHHHHHHHhCCC-ccceEEEEecc
Q 025845 80 VILVGHSLGGVTLALAADKFPH-KISVAVFVTAF 112 (247)
Q Consensus 80 ~~lvGhS~Gg~ia~~~a~~~p~-~v~~lvl~~~~ 112 (247)
++++|.|.||.++..++...++ .|+.+|-++++
T Consensus 94 ynivg~SQGglv~Raliq~cd~ppV~n~ISL~gP 127 (296)
T KOG2541|consen 94 YNIVGYSQGGLVARALIQFCDNPPVKNFISLGGP 127 (296)
T ss_pred eEEEEEccccHHHHHHHHhCCCCCcceeEeccCC
Confidence 9999999999999999987664 58999988874
No 162
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.12 E-value=6.8e-06 Score=59.67 Aligned_cols=102 Identities=20% Similarity=0.209 Sum_probs=75.7
Q ss_pred CcEEEEEcCCCCChh---hHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCC---CCcEEE
Q 025845 9 EKHFVLVHGVNHGAW---CWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPA---EEKVIL 82 (247)
Q Consensus 9 ~~~iv~lhG~~~~~~---~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~---~~~~~l 82 (247)
+.-|||+.|++...- .-.++...|.+.+|..+-+.++.+ ...-...++.+.++|+..+++++.. .++++|
T Consensus 36 ~~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ss----y~G~Gt~slk~D~edl~~l~~Hi~~~~fSt~vVL 111 (299)
T KOG4840|consen 36 SVKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSS----YNGYGTFSLKDDVEDLKCLLEHIQLCGFSTDVVL 111 (299)
T ss_pred EEEEEEEcccCCCccccccHHHHHHHHhhccceeeeeecccc----ccccccccccccHHHHHHHHHHhhccCcccceEE
Confidence 357899999986543 357888899888999999988732 1111134888899999999998732 248999
Q ss_pred EEEehhHHHHHHHHHh--CCCccceEEEEeccCC
Q 025845 83 VGHSLGGVTLALAADK--FPHKISVAVFVTAFMP 114 (247)
Q Consensus 83 vGhS~Gg~ia~~~a~~--~p~~v~~lvl~~~~~~ 114 (247)
+|||.|+.=.+.|..+ .|..+...|+.+|...
T Consensus 112 ~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSD 145 (299)
T KOG4840|consen 112 VGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSD 145 (299)
T ss_pred EecCccchHHHHHHHhccchHHHHHHHHhCccch
Confidence 9999999988887743 3556888888887543
No 163
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=98.05 E-value=2.4e-05 Score=66.00 Aligned_cols=105 Identities=13% Similarity=0.079 Sum_probs=65.3
Q ss_pred CCCcEEEEEcCCC---CChhhHHHHHHHHHh-CC-cEEEEecCC----CCCCCCCcc-cC---ccCHHHhHHHHHHHHHh
Q 025845 7 MEEKHFVLVHGVN---HGAWCWYKLKARLVA-GG-HRVTAVDLA----ASGINMKRI-ED---VHTFHAYSEPLMEVLAS 73 (247)
Q Consensus 7 ~~~~~iv~lhG~~---~~~~~~~~~~~~l~~-~g-~~vi~~D~~----G~G~S~~~~-~~---~~~~~~~~~~l~~~i~~ 73 (247)
.+.|.||++||.+ ++...+ ....|.. .+ +-|+.+++| |+..+.... .. ..+.....+.+.+-++.
T Consensus 93 ~~~pv~v~ihGG~~~~g~~~~~--~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~~~~~n~g~~D~~~al~wv~~~i~~ 170 (493)
T cd00312 93 NSLPVMVWIHGGGFMFGSGSLY--PGDGLAREGDNVIVVSINYRLGVLGFLSTGDIELPGNYGLKDQRLALKWVQDNIAA 170 (493)
T ss_pred CCCCEEEEEcCCccccCCCCCC--ChHHHHhcCCCEEEEEecccccccccccCCCCCCCcchhHHHHHHHHHHHHHHHHH
Confidence 4568999999964 233222 1233333 23 899999999 333332111 11 12344444555566666
Q ss_pred C-CCCCcEEEEEEehhHHHHHHHHHh--CCCccceEEEEeccC
Q 025845 74 L-PAEEKVILVGHSLGGVTLALAADK--FPHKISVAVFVTAFM 113 (247)
Q Consensus 74 l-~~~~~~~lvGhS~Gg~ia~~~a~~--~p~~v~~lvl~~~~~ 113 (247)
+ .+.+++.|+|+|-||..++.++.. .+..++++|+.++..
T Consensus 171 fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~ 213 (493)
T cd00312 171 FGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSA 213 (493)
T ss_pred hCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCc
Confidence 6 345799999999999988887764 244688888887743
No 164
>KOG3101 consensus Esterase D [General function prediction only]
Probab=98.03 E-value=8.1e-06 Score=58.81 Aligned_cols=104 Identities=18% Similarity=0.167 Sum_probs=68.8
Q ss_pred CcEEEEEcCCCCChhhHH--H-HHHHHHhCCcEEEEecCCCCCCCCCccc---------------------CccCHHH-h
Q 025845 9 EKHFVLVHGVNHGAWCWY--K-LKARLVAGGHRVTAVDLAASGINMKRIE---------------------DVHTFHA-Y 63 (247)
Q Consensus 9 ~~~iv~lhG~~~~~~~~~--~-~~~~l~~~g~~vi~~D~~G~G~S~~~~~---------------------~~~~~~~-~ 63 (247)
-|++.++-|+..+...|- . +.+.-+++|..|+++|-.-.|..-...+ ..|.+.+ .
T Consensus 44 ~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGFYvnAt~epw~~~yrMYdYv 123 (283)
T KOG3101|consen 44 CPVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGFYVNATQEPWAKHYRMYDYV 123 (283)
T ss_pred CceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCceeEEecccchHhhhhhHHHHH
Confidence 489999999999888763 2 2233345789999999754443211110 1122222 3
Q ss_pred HHHHHHHHHhC---CCCCcEEEEEEehhHHHHHHHHHhCCCccceEEEEecc
Q 025845 64 SEPLMEVLASL---PAEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAF 112 (247)
Q Consensus 64 ~~~l~~~i~~l---~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 112 (247)
++++-+++..- -+..++.+.||||||.-|+..+.+.|.+.+++-..+|.
T Consensus 124 ~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI 175 (283)
T KOG3101|consen 124 VKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPI 175 (283)
T ss_pred HHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceeccccc
Confidence 45666666521 04457899999999999999999999988887665553
No 165
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=98.01 E-value=0.00013 Score=58.14 Aligned_cols=106 Identities=13% Similarity=0.139 Sum_probs=68.0
Q ss_pred CCcEEEEEcCCCCChhh----H---HHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCCcE
Q 025845 8 EEKHFVLVHGVNHGAWC----W---YKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKV 80 (247)
Q Consensus 8 ~~~~iv~lhG~~~~~~~----~---~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~ 80 (247)
+.|.||++||.|--... . ..+...|. ...+++.|+.-...-......+.-+.+.++....+++.. +.+++
T Consensus 121 ~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~--~~SILvLDYsLt~~~~~~~~yPtQL~qlv~~Y~~Lv~~~-G~~nI 197 (374)
T PF10340_consen 121 SDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP--EVSILVLDYSLTSSDEHGHKYPTQLRQLVATYDYLVESE-GNKNI 197 (374)
T ss_pred CCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC--CCeEEEEeccccccccCCCcCchHHHHHHHHHHHHHhcc-CCCeE
Confidence 46899999998743322 2 22223333 368999998754300011112245666667777777666 78999
Q ss_pred EEEEEehhHHHHHHHHHh--CCCc---cceEEEEeccCCCC
Q 025845 81 ILVGHSLGGVTLALAADK--FPHK---ISVAVFVTAFMPDT 116 (247)
Q Consensus 81 ~lvGhS~Gg~ia~~~a~~--~p~~---v~~lvl~~~~~~~~ 116 (247)
+|+|-|-||.+++.+.+. .+++ =+++|+++|+....
T Consensus 198 ~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 198 ILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLV 238 (374)
T ss_pred EEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCc
Confidence 999999999999887652 2111 37899999975543
No 166
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=97.98 E-value=0.00021 Score=54.34 Aligned_cols=219 Identities=14% Similarity=0.072 Sum_probs=112.9
Q ss_pred EEEEEcCCCC-ChhhHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCC--CcEEEEEEeh
Q 025845 11 HFVLVHGVNH-GAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAE--EKVILVGHSL 87 (247)
Q Consensus 11 ~iv~lhG~~~-~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~--~~~~lvGhS~ 87 (247)
|+|++=||.+ ......+..+...+.|++++.+-.+-....... -.....++.+.+.+...... .++.+=.+|.
T Consensus 1 plvvl~gW~gA~~~hl~KY~~~Y~~~g~~il~~~~~~~~~~~~~----~~~~~~~~~l~~~l~~~~~~~~~~il~H~FSn 76 (240)
T PF05705_consen 1 PLVVLLGWMGAKPKHLAKYSDLYQDPGFDILLVTSPPADFFWPS----KRLAPAADKLLELLSDSQSASPPPILFHSFSN 76 (240)
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHhcCCeEEEEeCCHHHHeeec----cchHHHHHHHHHHhhhhccCCCCCEEEEEEEC
Confidence 5777778865 455677888877778999999886633222111 25566666676666665222 2788889999
Q ss_pred hHHHHHHHHH----h-C--C---CccceEEEEeccCCCCCCChHHHHHHHHHhhcCCCCcccccccccccCCCCccccee
Q 025845 88 GGVTLALAAD----K-F--P---HKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISML 157 (247)
Q Consensus 88 Gg~ia~~~a~----~-~--p---~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (247)
||...+.... . . . .+++++|+=+++....... ....+...+......++....... ...
T Consensus 77 GG~~~~~~l~~~~~~~~~~~~~~~~i~g~I~DS~P~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~--------~~~ 145 (240)
T PF05705_consen 77 GGSFLYSQLLEAYQSRKKFGKLLPRIKGIIFDSCPGIPTYSS---SARAFSAALPKSSPRWFVPLWPLL--------QFL 145 (240)
T ss_pred chHHHHHHHHHHHHhcccccccccccceeEEeCCCCcccccc---HHHHHHHHcCccchhhHHHHHHHH--------HHH
Confidence 8876554433 1 1 1 2378888544432221111 223332222001000100000000 000
Q ss_pred echhhHHHHHhcCCCcchhhhhhhh--hcccchhHHhhhhhhccchhHHHHHHHHHHHhhc----CCcceeeecCCCccc
Q 025845 158 FGREFLTIKIYQLCPPEVINLLRIT--FIGRAIVLRQIVSYLYLDSDTMQIMLNFIIIIII----TTHMSELINCSRRAF 231 (247)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~g~~D~~~p~~~~~~~~~~~~----~~~~~~~i~~~gH~~ 231 (247)
............. ..........+ ........+.....++.|.++|.+..++.. +.. -.++...++++.|+-
T Consensus 146 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~p~lylYS~~D~l~~~~~ve~~~-~~~~~~G~~V~~~~f~~S~HV~ 223 (240)
T PF05705_consen 146 LRLSIISYFIFGY-PDVQEYYRRALNDFANSPSRCPRLYLYSKADPLIPWRDVEEHA-EEARRKGWDVRAEKFEDSPHVA 223 (240)
T ss_pred HHHHHHHHHHhcC-CcHHHHHHHHHhhhhcCCCCCCeEEecCCCCcCcCHHHHHHHH-HHHHHcCCeEEEecCCCCchhh
Confidence 0000000000000 00011111111 112222344556668999999988766654 332 247889999999996
Q ss_pred cc-cChhhHHHHHHhh
Q 025845 232 FL-YHNTLFIQFVYVL 246 (247)
Q Consensus 232 ~~-e~p~~~~~~v~~~ 246 (247)
|+ ++|+++.++|...
T Consensus 224 H~r~~p~~Y~~~v~~f 239 (240)
T PF05705_consen 224 HLRKHPDRYWRAVDEF 239 (240)
T ss_pred hcccCHHHHHHHHHhh
Confidence 65 5899999988753
No 167
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.97 E-value=0.00015 Score=52.42 Aligned_cols=103 Identities=21% Similarity=0.258 Sum_probs=67.5
Q ss_pred CcEEEEEcCCCC-ChhhHH---------------HHHHHHHhCCcEEEEecCCC---CCCCC-CcccCccCHHHhHHHHH
Q 025845 9 EKHFVLVHGVNH-GAWCWY---------------KLKARLVAGGHRVTAVDLAA---SGINM-KRIEDVHTFHAYSEPLM 68 (247)
Q Consensus 9 ~~~iv~lhG~~~-~~~~~~---------------~~~~~l~~~g~~vi~~D~~G---~G~S~-~~~~~~~~~~~~~~~l~ 68 (247)
...+|+|||.|- .+..|. ++++.--+.||.|+..+..- +-.+. .|.....+..+.+.-+-
T Consensus 101 ~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~np~kyirt~veh~~yvw 180 (297)
T KOG3967|consen 101 QKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRNPQKYIRTPVEHAKYVW 180 (297)
T ss_pred cceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccCcchhccchHHHHHHHH
Confidence 347999999974 344562 34444444799999988642 11111 12222224444444333
Q ss_pred -HHHHhCCCCCcEEEEEEehhHHHHHHHHHhCCC--ccceEEEEecc
Q 025845 69 -EVLASLPAEEKVILVGHSLGGVTLALAADKFPH--KISVAVFVTAF 112 (247)
Q Consensus 69 -~~i~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~ 112 (247)
.++.-. ..+.+.+|.||+||...+.+..++|+ +|.++.+.++.
T Consensus 181 ~~~v~pa-~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~ 226 (297)
T KOG3967|consen 181 KNIVLPA-KAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSA 226 (297)
T ss_pred HHHhccc-CcceEEEEEeccCChhHHHHHHhcCCccceEEEEeeccc
Confidence 344444 67899999999999999999999985 68888888876
No 168
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=97.93 E-value=2.5e-05 Score=65.19 Aligned_cols=84 Identities=18% Similarity=0.205 Sum_probs=54.6
Q ss_pred hhHHHHHHHHHhCCcE-----EEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHh---CCCCCcEEEEEEehhHHHHHH
Q 025845 23 WCWYKLKARLVAGGHR-----VTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLAS---LPAEEKVILVGHSLGGVTLAL 94 (247)
Q Consensus 23 ~~~~~~~~~l~~~g~~-----vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~---l~~~~~~~lvGhS~Gg~ia~~ 94 (247)
..|.++++.|.+.||. ...+|+| .|.... ...+.+-..+.++|+. +++.++++||||||||.+++.
T Consensus 156 ~vw~kLIe~L~~iGY~~~nL~gAPYDWR---ls~~~l---e~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~ly 229 (642)
T PLN02517 156 FVWAVLIANLARIGYEEKNMYMAAYDWR---LSFQNT---EVRDQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLH 229 (642)
T ss_pred eeHHHHHHHHHHcCCCCCceeecccccc---cCccch---hhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHH
Confidence 3579999999988885 3334555 221111 1234444444444443 335689999999999999999
Q ss_pred HHHhCC---------------CccceEEEEecc
Q 025845 95 AADKFP---------------HKISVAVFVTAF 112 (247)
Q Consensus 95 ~a~~~p---------------~~v~~lvl~~~~ 112 (247)
+...-. ..|++.|.++++
T Consensus 230 FL~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp 262 (642)
T PLN02517 230 FMKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGP 262 (642)
T ss_pred HHHhccccccccCCcchHHHHHHHHHheecccc
Confidence 876321 137889988874
No 169
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=97.93 E-value=0.00075 Score=49.36 Aligned_cols=170 Identities=13% Similarity=0.044 Sum_probs=97.3
Q ss_pred CCcEEEEEcCCCCChhhHH----HHHHHHHhCCcEEEEecCCC----CCCCC--C------cc-----------------
Q 025845 8 EEKHFVLVHGVNHGAWCWY----KLKARLVAGGHRVTAVDLAA----SGINM--K------RI----------------- 54 (247)
Q Consensus 8 ~~~~iv~lhG~~~~~~~~~----~~~~~l~~~g~~vi~~D~~G----~G~S~--~------~~----------------- 54 (247)
.++.|+++||+-.+...|. .+...+.+. +..+.+|-|- -+.+. . +.
T Consensus 4 ~k~rvLcLHGfrQsg~~F~~Ktg~~rK~l~k~-~el~f~~aPh~~~~~~~~~~~~~~~~~a~~~~~~~~~~Wf~~n~~~~ 82 (230)
T KOG2551|consen 4 KKLRVLCLHGFRQSGKVFSEKTGSLRKLLKKL-AELVFPDAPHELPKADLPDSEREKKFDAPPDVEQNRYGWFSNNEASF 82 (230)
T ss_pred CCceEEEecchhhccHHHHHHhhhHHHHHHhh-heEEecCCCccCCcccCCcccccccccCCcccccchhhhhccccccc
Confidence 4678999999999888875 344555544 7788877762 11110 0 00
Q ss_pred cCccCHHHhHHHHHHHHHhCCCCCcE-EEEEEehhHHHHHHHHHhCC------C--ccceEEEEeccCCCCCCChHHHHH
Q 025845 55 EDVHTFHAYSEPLMEVLASLPAEEKV-ILVGHSLGGVTLALAADKFP------H--KISVAVFVTAFMPDTTHRPSFVLE 125 (247)
Q Consensus 55 ~~~~~~~~~~~~l~~~i~~l~~~~~~-~lvGhS~Gg~ia~~~a~~~p------~--~v~~lvl~~~~~~~~~~~~~~~~~ 125 (247)
.....++.-.+-|.+.+... + ++ -|+|+|.|+.++..++..-. + .++=+|+++++.....
T Consensus 83 ~~~~~~eesl~yl~~~i~en-G--PFDGllGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~v~~SGf~~~~~-------- 151 (230)
T KOG2551|consen 83 TEYFGFEESLEYLEDYIKEN-G--PFDGLLGFSQGAALAALLAGLGQKGLPYVKQPPFKFAVFISGFKFPSK-------- 151 (230)
T ss_pred ccccChHHHHHHHHHHHHHh-C--CCccccccchhHHHHHHhhcccccCCcccCCCCeEEEEEEecCCCCcc--------
Confidence 01123334455555666555 2 44 48999999999888876211 0 1334444444321100
Q ss_pred HHHHhhcCCCCcccccccccccCCCCcccceeechhhHHHHHhcCCCcchhhhhhhhhcccchhHHhhhhhhccchhHHH
Q 025845 126 QYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFLTIKIYQLCPPEVINLLRITFIGRAIVLRQIVSYLYLDSDTMQ 205 (247)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~D~~~p~ 205 (247)
..........+.++.+-..|+.|.++|.
T Consensus 152 ----------------------------------------------------~~~~~~~~~~i~~PSLHi~G~~D~iv~~ 179 (230)
T KOG2551|consen 152 ----------------------------------------------------KLDESAYKRPLSTPSLHIFGETDTIVPS 179 (230)
T ss_pred ----------------------------------------------------hhhhhhhccCCCCCeeEEecccceeecc
Confidence 0000011122333444455889999999
Q ss_pred HHHHHHHHhhcCCcceeeecCCCccccccChhhHHHHHHh
Q 025845 206 IMLNFIIIIIITTHMSELINCSRRAFFLYHNTLFIQFVYV 245 (247)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~v~~ 245 (247)
..+..++ +.+++..+..- .+||+..-.+ .+.+.|.+
T Consensus 180 ~~s~~L~-~~~~~a~vl~H-pggH~VP~~~--~~~~~i~~ 215 (230)
T KOG2551|consen 180 ERSEQLA-ESFKDATVLEH-PGGHIVPNKA--KYKEKIAD 215 (230)
T ss_pred hHHHHHH-HhcCCCeEEec-CCCccCCCch--HHHHHHHH
Confidence 9999999 99999955444 5589754443 44544443
No 170
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=97.89 E-value=5.6e-05 Score=63.21 Aligned_cols=102 Identities=18% Similarity=0.100 Sum_probs=73.6
Q ss_pred CCCcEEEEEcCCCCCh---hh--HHHHH--HHHHhCCcEEEEecCCCCCCCCCcc-------cCccCHHHhHHHHHHHHH
Q 025845 7 MEEKHFVLVHGVNHGA---WC--WYKLK--ARLVAGGHRVTAVDLAASGINMKRI-------EDVHTFHAYSEPLMEVLA 72 (247)
Q Consensus 7 ~~~~~iv~lhG~~~~~---~~--~~~~~--~~l~~~g~~vi~~D~~G~G~S~~~~-------~~~~~~~~~~~~l~~~i~ 72 (247)
.+-|+++++-|.++-- +. |.... ..|+..||-|+.+|-||.-...... -....+++.++-+.-+.+
T Consensus 640 kkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQVeglq~Lae 719 (867)
T KOG2281|consen 640 KKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQVEGLQMLAE 719 (867)
T ss_pred CCCceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCccccchhhHHHHhhccCeeeehhhHHHHHHHHH
Confidence 3468999999987521 22 22222 4667789999999999965442211 123577888888888887
Q ss_pred hC--CCCCcEEEEEEehhHHHHHHHHHhCCCccceEEE
Q 025845 73 SL--PAEEKVILVGHSLGGVTLALAADKFPHKISVAVF 108 (247)
Q Consensus 73 ~l--~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl 108 (247)
+. -+.+++.+-|+|+||++++....++|+-.+..|.
T Consensus 720 q~gfidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIA 757 (867)
T KOG2281|consen 720 QTGFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIA 757 (867)
T ss_pred hcCcccchheeEeccccccHHHHHHhhcCcceeeEEec
Confidence 76 2568999999999999999999999986665553
No 171
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=97.88 E-value=4.9e-05 Score=63.40 Aligned_cols=108 Identities=16% Similarity=0.051 Sum_probs=74.6
Q ss_pred CCCcEEEEEcCCCCChh---hH--HHHHH---HHHhCCcEEEEecCCCCCCCCCcccCccC-HHHhHHHHHHHHHhCC-C
Q 025845 7 MEEKHFVLVHGVNHGAW---CW--YKLKA---RLVAGGHRVTAVDLAASGINMKRIEDVHT-FHAYSEPLMEVLASLP-A 76 (247)
Q Consensus 7 ~~~~~iv~lhG~~~~~~---~~--~~~~~---~l~~~g~~vi~~D~~G~G~S~~~~~~~~~-~~~~~~~l~~~i~~l~-~ 76 (247)
+..|+++..+-++-... .+ ....+ .++.+||.||..|.||.|.|++.-...++ -.+...|+.+.|.+.. -
T Consensus 43 g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~SeG~~~~~~~~E~~Dg~D~I~Wia~QpWs 122 (563)
T COG2936 43 GPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGGSEGVFDPESSREAEDGYDTIEWLAKQPWS 122 (563)
T ss_pred CCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccccCCcccceeccccccchhHHHHHHHhCCcc
Confidence 45577777772222222 11 12223 56678999999999999999987654344 3444555555555441 3
Q ss_pred CCcEEEEEEehhHHHHHHHHHhCCCccceEEEEeccCC
Q 025845 77 EEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMP 114 (247)
Q Consensus 77 ~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 114 (247)
..+|..+|.|++|...+.+|...|..++.++-..+...
T Consensus 123 NG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D 160 (563)
T COG2936 123 NGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVD 160 (563)
T ss_pred CCeeeeecccHHHHHHHHHHhcCCchheeecccccccc
Confidence 46999999999999999999988888999887776533
No 172
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.84 E-value=4e-05 Score=57.23 Aligned_cols=214 Identities=11% Similarity=0.058 Sum_probs=112.8
Q ss_pred CCChhhHHH--HHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHh-------HHHHHHHHHhC-----CCCCcEEEEE
Q 025845 19 NHGAWCWYK--LKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAY-------SEPLMEVLASL-----PAEEKVILVG 84 (247)
Q Consensus 19 ~~~~~~~~~--~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~-------~~~l~~~i~~l-----~~~~~~~lvG 84 (247)
.++..+++. +...+.+++...+...-|-+|+..++..-...++.. ++.+.+..+.+ .+..++.++|
T Consensus 122 tgdh~y~rr~~L~~p~~k~~i~tmvle~pfYgqr~p~~q~~~~Le~vtDlf~mG~A~I~E~~~lf~Ws~~~g~g~~~~~g 201 (371)
T KOG1551|consen 122 TGDHVYTRRLVLSKPINKREIATMVLEKPFYGQRVPEEQIIHMLEYVTDLFKMGRATIQEFVKLFTWSSADGLGNLNLVG 201 (371)
T ss_pred cCCceeEeeeeecCchhhhcchheeeecccccccCCHHHHHHHHHHHHHHHHhhHHHHHHHHHhcccccccCcccceeee
Confidence 444444443 345566678899999999999887655311111111 11122222222 2678999999
Q ss_pred EehhHHHHHHHHHhCCCccceEEEEeccCCCCCCChHHHHHHHHHhhcCCCCcccccccccccCCCCcccceeechhhHH
Q 025845 85 HSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFLT 164 (247)
Q Consensus 85 hS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (247)
-||||.+|......++.-|.-+=++++.............. -... +..+.+..... +. ......+..-
T Consensus 202 ~Smgg~~a~~vgS~~q~Pva~~p~l~~~~asvs~teg~l~~-~~s~----~~~~~~~t~~~---~~----~~r~p~Q~~~ 269 (371)
T KOG1551|consen 202 RSMGGDIANQVGSLHQKPVATAPCLNSSKASVSATEGLLLQ-DTSK----MKRFNQTTNKS---GY----TSRNPAQSYH 269 (371)
T ss_pred eecccHHHHhhcccCCCCccccccccccccchhhhhhhhhh-hhHH----HHhhccCcchh---hh----hhhCchhhHH
Confidence 99999999999998877666665555532222222111111 1111 12222211000 00 0011101111
Q ss_pred HH---HhcCCCcchhhhhhhhhc----ccchhHH--h---hhhhhccchhHHHHHHHHHHHhhcCCcceeeecCCCcc-c
Q 025845 165 IK---IYQLCPPEVINLLRITFI----GRAIVLR--Q---IVSYLYLDSDTMQIMLNFIIIIIITTHMSELINCSRRA-F 231 (247)
Q Consensus 165 ~~---~~~~~~~~~~~~~~~~~~----~~~~~~~--~---~l~~g~~D~~~p~~~~~~~~~~~~~~~~~~~i~~~gH~-~ 231 (247)
.. -..+...+.....+.... ..++.++ . .+...++|..+|..-...+. +.+|++++..++ +||. .
T Consensus 270 ~~~~~~srn~~~E~~~~Mr~vmd~~T~v~~fp~Pvdpsl~ivv~A~~D~Yipr~gv~~lQ-~~WPg~eVr~~e-gGHVsa 347 (371)
T KOG1551|consen 270 LLSKEQSRNSRKESLIFMRGVMDECTHVANFPVPVDPSLIIVVQAKEDAYIPRTGVRSLQ-EIWPGCEVRYLE-GGHVSA 347 (371)
T ss_pred HHHHHhhhcchHHHHHHHHHHHHhhchhhcCCCCCCCCeEEEEEecCCccccccCcHHHH-HhCCCCEEEEee-cCceee
Confidence 11 111111111111111100 1111111 0 01126899999998888998 999999999999 7898 7
Q ss_pred cccChhhHHHHHHhh
Q 025845 232 FLYHNTLFIQFVYVL 246 (247)
Q Consensus 232 ~~e~p~~~~~~v~~~ 246 (247)
++-+.+.|..+|.++
T Consensus 348 yl~k~dlfRR~I~d~ 362 (371)
T KOG1551|consen 348 YLFKQDLFRRAIVDG 362 (371)
T ss_pred eehhchHHHHHHHHH
Confidence 889999999998764
No 173
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.78 E-value=0.00013 Score=58.04 Aligned_cols=100 Identities=20% Similarity=0.144 Sum_probs=76.4
Q ss_pred cEEEEEcCCCCChhhHH-------HHHHHHHhCCcEEEEecCCCCCCCCCccc---------CccCHHHhHHHHHHHHHh
Q 025845 10 KHFVLVHGVNHGAWCWY-------KLKARLVAGGHRVTAVDLAASGINMKRIE---------DVHTFHAYSEPLMEVLAS 73 (247)
Q Consensus 10 ~~iv~lhG~~~~~~~~~-------~~~~~l~~~g~~vi~~D~~G~G~S~~~~~---------~~~~~~~~~~~l~~~i~~ 73 (247)
.||+|--|.-|+.+.|- .+++++ +--+|....|-+|.|-+-.. ...+.++-.+|..+++..
T Consensus 81 gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~---~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~ 157 (492)
T KOG2183|consen 81 GPIFFYTGNEGDIEWFANNTGFMWDLAPEL---KALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTF 157 (492)
T ss_pred CceEEEeCCcccHHHHHhccchHHhhhHhh---CceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHH
Confidence 68899999888776653 344444 35789999999999965432 234777777888888877
Q ss_pred CC-----CCCcEEEEEEehhHHHHHHHHHhCCCccceEEEEecc
Q 025845 74 LP-----AEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAF 112 (247)
Q Consensus 74 l~-----~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 112 (247)
|. ...+++.+|-|+||++|..+=.+||..|.+....+++
T Consensus 158 lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSAP 201 (492)
T KOG2183|consen 158 LKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASAP 201 (492)
T ss_pred HhhccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccCc
Confidence 71 3469999999999999999999999998887765553
No 174
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.74 E-value=0.00012 Score=51.57 Aligned_cols=52 Identities=21% Similarity=0.263 Sum_probs=36.2
Q ss_pred HhHHHHHHHHHhC---CCCCcEEEEEEehhHHHHHHHHHhCCC----ccceEEEEeccC
Q 025845 62 AYSEPLMEVLASL---PAEEKVILVGHSLGGVTLALAADKFPH----KISVAVFVTAFM 113 (247)
Q Consensus 62 ~~~~~l~~~i~~l---~~~~~~~lvGhS~Gg~ia~~~a~~~p~----~v~~lvl~~~~~ 113 (247)
...+.+...++.. ....+++++|||+||.+|..++..... ++..++..+++.
T Consensus 9 ~~~~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~ 67 (153)
T cd00741 9 SLANLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPR 67 (153)
T ss_pred HHHHHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCc
Confidence 3444444444443 157899999999999999998887654 566677777653
No 175
>COG0627 Predicted esterase [General function prediction only]
Probab=97.65 E-value=0.00026 Score=55.65 Aligned_cols=106 Identities=18% Similarity=0.250 Sum_probs=66.4
Q ss_pred CcEEEEEcCCCCChhhH---HHHHHHHHhCCcEEEEecCC--------------CCCCCC---Cccc---C-ccCHHH-h
Q 025845 9 EKHFVLVHGVNHGAWCW---YKLKARLVAGGHRVTAVDLA--------------ASGINM---KRIE---D-VHTFHA-Y 63 (247)
Q Consensus 9 ~~~iv~lhG~~~~~~~~---~~~~~~l~~~g~~vi~~D~~--------------G~G~S~---~~~~---~-~~~~~~-~ 63 (247)
=|+++++||..++...| ..+-......++-++++|-. |-+.|- .... . .+.++. +
T Consensus 54 ipV~~~l~G~t~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~~~q~~tfl 133 (316)
T COG0627 54 IPVLYLLSGLTCNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASGPYQWETFL 133 (316)
T ss_pred CCEEEEeCCCCCCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccCccchhHHH
Confidence 36889999998876443 23333444466777776332 332221 1111 1 144444 3
Q ss_pred HHHHHHHHH-hCCCC---CcEEEEEEehhHHHHHHHHHhCCCccceEEEEeccCC
Q 025845 64 SEPLMEVLA-SLPAE---EKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMP 114 (247)
Q Consensus 64 ~~~l~~~i~-~l~~~---~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 114 (247)
.+++-+.++ +++.. .+-.++||||||.-|+.+|.++|++.+.+.-.++...
T Consensus 134 ~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~ 188 (316)
T COG0627 134 TQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILS 188 (316)
T ss_pred HhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceecccccccc
Confidence 456664444 44211 2789999999999999999999999999887777543
No 176
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=97.61 E-value=0.0012 Score=49.99 Aligned_cols=38 Identities=24% Similarity=0.474 Sum_probs=34.6
Q ss_pred CCCcEEEEEEehhHHHHHHHHHhCCCccceEEEEeccC
Q 025845 76 AEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFM 113 (247)
Q Consensus 76 ~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 113 (247)
+.++-.++|||+||.+++....++|+.+...++++|..
T Consensus 135 ~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSl 172 (264)
T COG2819 135 NSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSL 172 (264)
T ss_pred CcccceeeeecchhHHHHHHHhcCcchhceeeeecchh
Confidence 45678999999999999999999999999999999863
No 177
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.58 E-value=0.0007 Score=55.30 Aligned_cols=107 Identities=17% Similarity=0.115 Sum_probs=81.1
Q ss_pred CCCCcEEEEEcCCCCChhhH-----HHHHHHHHhCCcEEEEecCCCCCCCCCccc------CccCHHHhHHHHHHHHHhC
Q 025845 6 GMEEKHFVLVHGVNHGAWCW-----YKLKARLVAGGHRVTAVDLAASGINMKRIE------DVHTFHAYSEPLMEVLASL 74 (247)
Q Consensus 6 ~~~~~~iv~lhG~~~~~~~~-----~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~------~~~~~~~~~~~l~~~i~~l 74 (247)
.+.+|..++|.|=+.-...| ......-.+-|-.|+-...|-+|.|.+... ...+..+...|+.++|+++
T Consensus 83 ~~~gPiFLmIGGEgp~~~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~ 162 (514)
T KOG2182|consen 83 KPGGPIFLMIGGEGPESDKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAM 162 (514)
T ss_pred cCCCceEEEEcCCCCCCCCccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHH
Confidence 56778888888876555444 122333334567999999999998865432 2458888899999999987
Q ss_pred C------CCCcEEEEEEehhHHHHHHHHHhCCCccceEEEEecc
Q 025845 75 P------AEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAF 112 (247)
Q Consensus 75 ~------~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 112 (247)
+ ...+++.+|-|+-|.++..+=.+||+.+.+-|..+++
T Consensus 163 n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSap 206 (514)
T KOG2182|consen 163 NAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAP 206 (514)
T ss_pred HhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeecccccc
Confidence 2 2239999999999999999999999999888876664
No 178
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=97.58 E-value=0.00065 Score=53.13 Aligned_cols=85 Identities=21% Similarity=0.149 Sum_probs=49.9
Q ss_pred HHHHHHHhCCcEEEEecCCCCCCCCCcc-cCccCHHHhHHHHHHHHHhC--CCCCcEEEEEEehhHHHHHHHHHhC----
Q 025845 27 KLKARLVAGGHRVTAVDLAASGINMKRI-EDVHTFHAYSEPLMEVLASL--PAEEKVILVGHSLGGVTLALAADKF---- 99 (247)
Q Consensus 27 ~~~~~l~~~g~~vi~~D~~G~G~S~~~~-~~~~~~~~~~~~l~~~i~~l--~~~~~~~lvGhS~Gg~ia~~~a~~~---- 99 (247)
.++..+.++||.|+++|+.|-|..-... ...++.-+.++...++.... ....++.++|||-||.-++..|...
T Consensus 17 ~~l~~~L~~GyaVv~pDY~Glg~~y~~~~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA~l~~~YA 96 (290)
T PF03583_consen 17 PFLAAWLARGYAVVAPDYEGLGTPYLNGRSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWAAELAPSYA 96 (290)
T ss_pred HHHHHHHHCCCEEEecCCCCCCCcccCcHhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHHHHHhHHhC
Confidence 3444455589999999999998721111 11123333344444333322 1246899999999999887766432
Q ss_pred CCc---cceEEEEec
Q 025845 100 PHK---ISVAVFVTA 111 (247)
Q Consensus 100 p~~---v~~lvl~~~ 111 (247)
||. +.+.+..++
T Consensus 97 peL~~~l~Gaa~gg~ 111 (290)
T PF03583_consen 97 PELNRDLVGAAAGGP 111 (290)
T ss_pred cccccceeEEeccCC
Confidence 442 455554443
No 179
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=97.57 E-value=0.00021 Score=49.42 Aligned_cols=38 Identities=29% Similarity=0.566 Sum_probs=29.9
Q ss_pred HHHhHHHHHHHHHhCCCCCcEEEEEEehhHHHHHHHHHh
Q 025845 60 FHAYSEPLMEVLASLPAEEKVILVGHSLGGVTLALAADK 98 (247)
Q Consensus 60 ~~~~~~~l~~~i~~l~~~~~~~lvGhS~Gg~ia~~~a~~ 98 (247)
.+...+.+.++++.. ...++.+.|||+||.+|..++..
T Consensus 47 ~~~~~~~l~~~~~~~-~~~~i~itGHSLGGalA~l~a~~ 84 (140)
T PF01764_consen 47 YDQILDALKELVEKY-PDYSIVITGHSLGGALASLAAAD 84 (140)
T ss_dssp HHHHHHHHHHHHHHS-TTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcc-cCccchhhccchHHHHHHHHHHh
Confidence 345567777777776 56899999999999999888764
No 180
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=97.49 E-value=0.00046 Score=56.44 Aligned_cols=107 Identities=15% Similarity=0.087 Sum_probs=66.9
Q ss_pred CCCcEEEEEcCCC---CChhhHHHHHHHHHhCC-cEEEEecCCC--CCCCC--------Cccc--CccCHHHhHHHHHHH
Q 025845 7 MEEKHFVLVHGVN---HGAWCWYKLKARLVAGG-HRVTAVDLAA--SGINM--------KRIE--DVHTFHAYSEPLMEV 70 (247)
Q Consensus 7 ~~~~~iv~lhG~~---~~~~~~~~~~~~l~~~g-~~vi~~D~~G--~G~S~--------~~~~--~~~~~~~~~~~l~~~ 70 (247)
.+.|.+|+|||.+ |+...-..--..|+++| +=|+.+++|= +|.=+ .... ...+.-.-.+.+.+-
T Consensus 92 ~~~PVmV~IHGG~y~~Gs~s~~~ydgs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n~Gl~DqilALkWV~~N 171 (491)
T COG2272 92 EKLPVMVYIHGGGYIMGSGSEPLYDGSALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASNLGLLDQILALKWVRDN 171 (491)
T ss_pred CCCcEEEEEeccccccCCCcccccChHHHHhcCCEEEEEeCcccccceeeehhhccccccccccccHHHHHHHHHHHHHH
Confidence 4469999999984 33333112225666666 7788888872 22111 1100 112333345777788
Q ss_pred HHhC-CCCCcEEEEEEehhHHHHHHHHHhCCC---ccceEEEEeccCC
Q 025845 71 LASL-PAEEKVILVGHSLGGVTLALAADKFPH---KISVAVFVTAFMP 114 (247)
Q Consensus 71 i~~l-~~~~~~~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~~~ 114 (247)
|+++ ++..+|.|+|+|-||+.++.+.+ .|. .+.++|+.|+...
T Consensus 172 Ie~FGGDp~NVTl~GeSAGa~si~~Lla-~P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 172 IEAFGGDPQNVTLFGESAGAASILTLLA-VPSAKGLFHRAIALSGAAS 218 (491)
T ss_pred HHHhCCCccceEEeeccchHHHHHHhhc-CccchHHHHHHHHhCCCCC
Confidence 8888 34579999999999997766654 353 5788888887643
No 181
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=97.48 E-value=0.00063 Score=50.92 Aligned_cols=47 Identities=23% Similarity=0.226 Sum_probs=34.5
Q ss_pred HHHHHHHHhCCCCCcEEEEEEehhHHHHHHHHHhC----CCccceEEEEeccC
Q 025845 65 EPLMEVLASLPAEEKVILVGHSLGGVTLALAADKF----PHKISVAVFVTAFM 113 (247)
Q Consensus 65 ~~l~~~i~~l~~~~~~~lvGhS~Gg~ia~~~a~~~----p~~v~~lvl~~~~~ 113 (247)
+-+..+++.. . +++.+.|||.||.+|+.+|... .++|.++...+++.
T Consensus 73 ~yl~~~~~~~-~-~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPG 123 (224)
T PF11187_consen 73 AYLKKIAKKY-P-GKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPG 123 (224)
T ss_pred HHHHHHHHhC-C-CCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCC
Confidence 3344444444 2 3699999999999999999874 35788888777753
No 182
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=97.47 E-value=0.00028 Score=57.23 Aligned_cols=86 Identities=23% Similarity=0.295 Sum_probs=55.0
Q ss_pred hhHHHHHHHHHhCCcE------EEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCCcEEEEEEehhHHHHHHHH
Q 025845 23 WCWYKLKARLVAGGHR------VTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGVTLALAA 96 (247)
Q Consensus 23 ~~~~~~~~~l~~~g~~------vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~lvGhS~Gg~ia~~~a 96 (247)
..|..+++.|..=||. -..+|+|=.-.++... ...+.++..-++...+ +++.++++||+|||||.+.+.+.
T Consensus 124 ~~w~~~i~~lv~~GYe~~~~l~ga~YDwRls~~~~e~r--d~yl~kLK~~iE~~~~-~~G~kkVvlisHSMG~l~~lyFl 200 (473)
T KOG2369|consen 124 WYWHELIENLVGIGYERGKTLFGAPYDWRLSYHNSEER--DQYLSKLKKKIETMYK-LNGGKKVVLISHSMGGLYVLYFL 200 (473)
T ss_pred HHHHHHHHHHHhhCcccCceeeccccchhhccCChhHH--HHHHHHHHHHHHHHHH-HcCCCceEEEecCCccHHHHHHH
Confidence 5799999999876765 3458888311111111 1234444444443333 33679999999999999999999
Q ss_pred HhCCC--------ccceEEEEec
Q 025845 97 DKFPH--------KISVAVFVTA 111 (247)
Q Consensus 97 ~~~p~--------~v~~lvl~~~ 111 (247)
..+++ .+++.|-+++
T Consensus 201 ~w~~~~~~~W~~k~I~sfvnig~ 223 (473)
T KOG2369|consen 201 KWVEAEGPAWCDKYIKSFVNIGA 223 (473)
T ss_pred hcccccchhHHHHHHHHHHccCc
Confidence 88776 2555555544
No 183
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=97.47 E-value=0.0006 Score=50.99 Aligned_cols=100 Identities=19% Similarity=0.167 Sum_probs=57.9
Q ss_pred EEEEEcCCC--CChh-hHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHh--CC-CCCcEEEEE
Q 025845 11 HFVLVHGVN--HGAW-CWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLAS--LP-AEEKVILVG 84 (247)
Q Consensus 11 ~iv~lhG~~--~~~~-~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~--l~-~~~~~~lvG 84 (247)
.|=|+.|.. .... .|+.+.+.|+++||.||+.-+.- |..- ......-...+-..+..+.+. +. ..-+++-||
T Consensus 19 vihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~-tfDH-~~~A~~~~~~f~~~~~~L~~~~~~~~~~lP~~~vG 96 (250)
T PF07082_consen 19 VIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVV-TFDH-QAIAREVWERFERCLRALQKRGGLDPAYLPVYGVG 96 (250)
T ss_pred EEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCC-CCcH-HHHHHHHHHHHHHHHHHHHHhcCCCcccCCeeeee
Confidence 566777763 3333 48899999999999999987641 1000 000000111111111111111 10 113678899
Q ss_pred EehhHHHHHHHHHhCCCccceEEEEecc
Q 025845 85 HSLGGVTLALAADKFPHKISVAVFVTAF 112 (247)
Q Consensus 85 hS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 112 (247)
||||+.+-+.+...++..-++.|+++-+
T Consensus 97 HSlGcklhlLi~s~~~~~r~gniliSFN 124 (250)
T PF07082_consen 97 HSLGCKLHLLIGSLFDVERAGNILISFN 124 (250)
T ss_pred cccchHHHHHHhhhccCcccceEEEecC
Confidence 9999998888887776555777887754
No 184
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=97.41 E-value=0.001 Score=59.85 Aligned_cols=98 Identities=16% Similarity=0.196 Sum_probs=74.3
Q ss_pred CCCCCcEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCCcEEEEE
Q 025845 5 VGMEEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVG 84 (247)
Q Consensus 5 ~~~~~~~iv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~lvG 84 (247)
...+.||++|+|.+-|....+++++..|. .|.+|.-....-...++++.|+-...-|++++...+..++|
T Consensus 2119 ~~se~~~~Ffv~pIEG~tt~l~~la~rle----------~PaYglQ~T~~vP~dSies~A~~yirqirkvQP~GPYrl~G 2188 (2376)
T KOG1202|consen 2119 VQSEEPPLFFVHPIEGFTTALESLASRLE----------IPAYGLQCTEAVPLDSIESLAAYYIRQIRKVQPEGPYRLAG 2188 (2376)
T ss_pred hcccCCceEEEeccccchHHHHHHHhhcC----------CcchhhhccccCCcchHHHHHHHHHHHHHhcCCCCCeeeec
Confidence 34678999999999998888888877664 23333332222224699999999999999996678999999
Q ss_pred EehhHHHHHHHHHhC--CCccceEEEEecc
Q 025845 85 HSLGGVTLALAADKF--PHKISVAVFVTAF 112 (247)
Q Consensus 85 hS~Gg~ia~~~a~~~--p~~v~~lvl~~~~ 112 (247)
+|+|+.++..+|... .+....+|+++..
T Consensus 2189 YSyG~~l~f~ma~~Lqe~~~~~~lillDGs 2218 (2376)
T KOG1202|consen 2189 YSYGACLAFEMASQLQEQQSPAPLILLDGS 2218 (2376)
T ss_pred cchhHHHHHHHHHHHHhhcCCCcEEEecCc
Confidence 999999999988643 2345668888875
No 185
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=97.40 E-value=0.0019 Score=53.37 Aligned_cols=106 Identities=13% Similarity=0.154 Sum_probs=69.7
Q ss_pred CCCcEEEEEcCCCCChhhHHHHHH-------------------HHHhCCcEEEEecCC-CCCCCCCcccC--ccCHHHhH
Q 025845 7 MEEKHFVLVHGVNHGAWCWYKLKA-------------------RLVAGGHRVTAVDLA-ASGINMKRIED--VHTFHAYS 64 (247)
Q Consensus 7 ~~~~~iv~lhG~~~~~~~~~~~~~-------------------~l~~~g~~vi~~D~~-G~G~S~~~~~~--~~~~~~~~ 64 (247)
.+.|.||++.|.+|.+..|..+.+ .+.+ -.+++-+|.| |.|.|...... ..+.++.+
T Consensus 38 ~~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~-~an~l~iD~PvGtGfS~~~~~~~~~~~~~~~a 116 (415)
T PF00450_consen 38 EDDPLILWLNGGPGCSSMWGLFGENGPFRINPDGPYTLEDNPYSWNK-FANLLFIDQPVGTGFSYGNDPSDYVWNDDQAA 116 (415)
T ss_dssp CSS-EEEEEE-TTTB-THHHHHCTTSSEEEETTSTSEEEE-TT-GGG-TSEEEEE--STTSTT-EESSGGGGS-SHHHHH
T ss_pred CCccEEEEecCCceeccccccccccCceEEeeccccccccccccccc-ccceEEEeecCceEEeeccccccccchhhHHH
Confidence 567899999999998888744432 1121 2689999955 99999765542 35888899
Q ss_pred HHHHHHHHhC------CCCCcEEEEEEehhHHHHHHHHH----hC------CCccceEEEEeccC
Q 025845 65 EPLMEVLASL------PAEEKVILVGHSLGGVTLALAAD----KF------PHKISVAVFVTAFM 113 (247)
Q Consensus 65 ~~l~~~i~~l------~~~~~~~lvGhS~Gg~ia~~~a~----~~------p~~v~~lvl~~~~~ 113 (247)
+++.++|..+ ....+++|.|.|+||..+-.+|. .. +-.++++++.++..
T Consensus 117 ~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi~IGng~~ 181 (415)
T PF00450_consen 117 EDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGIAIGNGWI 181 (415)
T ss_dssp HHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEEEEESE-S
T ss_pred HHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccccccccccccceecCccc
Confidence 9998888765 14569999999999976544443 22 23478999888764
No 186
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=97.25 E-value=0.0048 Score=49.69 Aligned_cols=35 Identities=23% Similarity=0.264 Sum_probs=31.5
Q ss_pred CcEEEEEEehhHHHHHHHHHhCCCccceEEEEecc
Q 025845 78 EKVILVGHSLGGVTLALAADKFPHKISVAVFVTAF 112 (247)
Q Consensus 78 ~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 112 (247)
-+++++|+|.||++|..+|.-.|..+.+++=.+++
T Consensus 184 lp~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~ 218 (403)
T PF11144_consen 184 LPKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSY 218 (403)
T ss_pred CcEEEEecCcHHHHHHHHHhhCccceeEEEecCcc
Confidence 49999999999999999999999999999866665
No 187
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=97.22 E-value=0.0021 Score=54.87 Aligned_cols=104 Identities=12% Similarity=-0.000 Sum_probs=60.1
Q ss_pred CCcEEEEEcCCC---CCh--hhHHHHHHHHHhCCcEEEEecCC----CCCCCCCcc-c-Ccc---CHHHhHHHHHHHHHh
Q 025845 8 EEKHFVLVHGVN---HGA--WCWYKLKARLVAGGHRVTAVDLA----ASGINMKRI-E-DVH---TFHAYSEPLMEVLAS 73 (247)
Q Consensus 8 ~~~~iv~lhG~~---~~~--~~~~~~~~~l~~~g~~vi~~D~~----G~G~S~~~~-~-~~~---~~~~~~~~l~~~i~~ 73 (247)
.-|++|+|||.+ |+. ..+. -...+.+++.=||.+++| |+-.+.... . ..+ +...-.+.|.+-|.+
T Consensus 124 ~lPV~v~ihGG~f~~G~~~~~~~~-~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~ 202 (535)
T PF00135_consen 124 KLPVMVWIHGGGFMFGSGSFPPYD-GASLAASKDVIVVTINYRLGAFGFLSLGDLDAPSGNYGLLDQRLALKWVQDNIAA 202 (535)
T ss_dssp SEEEEEEE--STTTSSCTTSGGGH-THHHHHHHTSEEEEE----HHHHH-BSSSTTSHBSTHHHHHHHHHHHHHHHHGGG
T ss_pred ccceEEEeecccccCCCccccccc-ccccccCCCEEEEEecccccccccccccccccCchhhhhhhhHHHHHHHHhhhhh
Confidence 458999999975 333 2232 223344467899999998 333232211 1 223 334445666677777
Q ss_pred CC-CCCcEEEEEEehhHHHHHHHHHh--CCCccceEEEEecc
Q 025845 74 LP-AEEKVILVGHSLGGVTLALAADK--FPHKISVAVFVTAF 112 (247)
Q Consensus 74 l~-~~~~~~lvGhS~Gg~ia~~~a~~--~p~~v~~lvl~~~~ 112 (247)
++ +.++|.|.|||-||..+...... ....+.++|+.++.
T Consensus 203 FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs 244 (535)
T PF00135_consen 203 FGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGS 244 (535)
T ss_dssp GTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--
T ss_pred cccCCcceeeeeecccccccceeeeccccccccccccccccc
Confidence 73 45799999999999876655543 23579999999984
No 188
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=97.16 E-value=0.0013 Score=47.08 Aligned_cols=55 Identities=25% Similarity=0.287 Sum_probs=43.3
Q ss_pred CHHHhHHHHHHHHHhCC----CCCcEEEEEEehhHHHHHHHHHhCCCccceEEEEeccC
Q 025845 59 TFHAYSEPLMEVLASLP----AEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFM 113 (247)
Q Consensus 59 ~~~~~~~~l~~~i~~l~----~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 113 (247)
.-+.-+.+|..+++.|. ....+.++|||+|+.++-.++...+..+..+|+++++.
T Consensus 86 ~A~~ga~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG 144 (177)
T PF06259_consen 86 YARAGAPRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPG 144 (177)
T ss_pred HHHHHHHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCC
Confidence 34556677777777772 34589999999999999888877677899999999863
No 189
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.08 E-value=0.00099 Score=50.31 Aligned_cols=29 Identities=38% Similarity=0.563 Sum_probs=22.3
Q ss_pred HHHHhCCCCCcEEEEEEehhHHHHHHHHHh
Q 025845 69 EVLASLPAEEKVILVGHSLGGVTLALAADK 98 (247)
Q Consensus 69 ~~i~~l~~~~~~~lvGhS~Gg~ia~~~a~~ 98 (247)
+.++.. ...++.+.|||+||.+|..++..
T Consensus 120 ~~~~~~-p~~~i~vtGHSLGGaiA~l~a~~ 148 (229)
T cd00519 120 SALKQY-PDYKIIVTGHSLGGALASLLALD 148 (229)
T ss_pred HHHhhC-CCceEEEEccCHHHHHHHHHHHH
Confidence 333333 46789999999999999888764
No 190
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=97.06 E-value=0.0029 Score=50.53 Aligned_cols=84 Identities=20% Similarity=0.177 Sum_probs=60.0
Q ss_pred EEEEEcCCCCChhhHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCC---CCCcEEEEEEeh
Q 025845 11 HFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLP---AEEKVILVGHSL 87 (247)
Q Consensus 11 ~iv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~---~~~~~~lvGhS~ 87 (247)
.-||..|=||=...=+.+.+.|.++|+.|+-+|-.-+--|. -+.++.++|+..+|+... +.+++.|+|+|+
T Consensus 262 ~av~~SGDGGWr~lDk~v~~~l~~~gvpVvGvdsLRYfW~~------rtPe~~a~Dl~r~i~~y~~~w~~~~~~liGySf 335 (456)
T COG3946 262 VAVFYSGDGGWRDLDKEVAEALQKQGVPVVGVDSLRYFWSE------RTPEQIAADLSRLIRFYARRWGAKRVLLIGYSF 335 (456)
T ss_pred EEEEEecCCchhhhhHHHHHHHHHCCCceeeeehhhhhhcc------CCHHHHHHHHHHHHHHHHHhhCcceEEEEeecc
Confidence 44677776664444467888999999999999965443333 377788888888887641 678999999999
Q ss_pred hHHHHHHHHHhCC
Q 025845 88 GGVTLALAADKFP 100 (247)
Q Consensus 88 Gg~ia~~~a~~~p 100 (247)
|+-+.=....+.|
T Consensus 336 GADvlP~~~n~L~ 348 (456)
T COG3946 336 GADVLPFAYNRLP 348 (456)
T ss_pred cchhhHHHHHhCC
Confidence 9976544443433
No 191
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=96.98 E-value=0.0021 Score=47.16 Aligned_cols=72 Identities=15% Similarity=0.055 Sum_probs=48.9
Q ss_pred HHHHHHHhCCcEEEEecCCCCCCCCCc------c--cCccCHHHhHHHHHHHHHhCCCCCcEEEEEEehhHHHHHHHHHh
Q 025845 27 KLKARLVAGGHRVTAVDLAASGINMKR------I--EDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGVTLALAADK 98 (247)
Q Consensus 27 ~~~~~l~~~g~~vi~~D~~G~G~S~~~------~--~~~~~~~~~~~~l~~~i~~l~~~~~~~lvGhS~Gg~ia~~~a~~ 98 (247)
.++..+.+. -+|+++=+|=....... . .....+.+..+.....|++.++.++++|+|||.|+.+...+..+
T Consensus 37 ~qas~F~~~-~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e 115 (207)
T PF11288_consen 37 NQASAFNGV-CNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKE 115 (207)
T ss_pred HHhhhhhcC-CccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHH
Confidence 344455533 58888887743221111 1 01245666777777788888777899999999999999999886
Q ss_pred C
Q 025845 99 F 99 (247)
Q Consensus 99 ~ 99 (247)
+
T Consensus 116 ~ 116 (207)
T PF11288_consen 116 E 116 (207)
T ss_pred H
Confidence 5
No 192
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=96.96 E-value=0.0022 Score=47.04 Aligned_cols=101 Identities=15% Similarity=0.101 Sum_probs=64.4
Q ss_pred cEEEEEcCCCC-ChhhHHHHHHHHHhCCcEEEEecCC-CCCCCCCccc-------CccCHHHhHHHHHHHHHhC---CCC
Q 025845 10 KHFVLVHGVNH-GAWCWYKLKARLVAGGHRVTAVDLA-ASGINMKRIE-------DVHTFHAYSEPLMEVLASL---PAE 77 (247)
Q Consensus 10 ~~iv~lhG~~~-~~~~~~~~~~~l~~~g~~vi~~D~~-G~G~S~~~~~-------~~~~~~~~~~~l~~~i~~l---~~~ 77 (247)
..||.+--+.| +...-+..+..++..||.|+.+|+- |-=.|+..+. ...+....-+++..+++.+ +..
T Consensus 40 ~~li~i~DvfG~~~~n~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk~~g~~ 119 (242)
T KOG3043|consen 40 KVLIVIQDVFGFQFPNTREGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKWLKNHGDS 119 (242)
T ss_pred eEEEEEEeeeccccHHHHHHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHHHHHHHHHHcCCc
Confidence 36666666655 4445788888998899999999984 4112221110 1123333334444444443 347
Q ss_pred CcEEEEEEehhHHHHHHHHHhCCCccceEEEEec
Q 025845 78 EKVILVGHSLGGVTLALAADKFPHKISVAVFVTA 111 (247)
Q Consensus 78 ~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~ 111 (247)
+++-++|+.|||.++..+....| .+.+.+..=+
T Consensus 120 kkIGv~GfCwGak~vv~~~~~~~-~f~a~v~~hp 152 (242)
T KOG3043|consen 120 KKIGVVGFCWGAKVVVTLSAKDP-EFDAGVSFHP 152 (242)
T ss_pred ceeeEEEEeecceEEEEeeccch-hheeeeEecC
Confidence 89999999999999988888877 5666664443
No 193
>PLN02162 triacylglycerol lipase
Probab=96.92 E-value=0.0031 Score=51.62 Aligned_cols=37 Identities=38% Similarity=0.450 Sum_probs=28.7
Q ss_pred HHHhHHHHHHHHHhCCCCCcEEEEEEehhHHHHHHHHH
Q 025845 60 FHAYSEPLMEVLASLPAEEKVILVGHSLGGVTLALAAD 97 (247)
Q Consensus 60 ~~~~~~~l~~~i~~l~~~~~~~lvGhS~Gg~ia~~~a~ 97 (247)
+....+.+.+++.+. ...++++.|||+||.+|..+|.
T Consensus 261 y~~I~~~L~~lL~k~-p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 261 YYTIRQMLRDKLARN-KNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHHHHHhC-CCceEEEEecChHHHHHHHHHH
Confidence 445556666777766 5678999999999999988754
No 194
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=96.91 E-value=0.0049 Score=50.77 Aligned_cols=103 Identities=15% Similarity=0.134 Sum_probs=67.2
Q ss_pred CCcEEEEEcCCCCChhhHHHHHH----H---------------HHhCCcEEEEec-CCCCCCCCCcc-cCccCHHHhHHH
Q 025845 8 EEKHFVLVHGVNHGAWCWYKLKA----R---------------LVAGGHRVTAVD-LAASGINMKRI-EDVHTFHAYSEP 66 (247)
Q Consensus 8 ~~~~iv~lhG~~~~~~~~~~~~~----~---------------l~~~g~~vi~~D-~~G~G~S~~~~-~~~~~~~~~~~~ 66 (247)
+.|.|+++.|.+|.+..|-.+.+ + +... -.++-+| .-|.|.|.... ...-++....+|
T Consensus 100 ~rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~-adLvFiDqPvGTGfS~a~~~e~~~d~~~~~~D 178 (498)
T COG2939 100 NRPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWLDF-ADLVFIDQPVGTGFSRALGDEKKKDFEGAGKD 178 (498)
T ss_pred CCceEEEecCCCChHhhhhhhhhcCCeeeeCCCCCCCCCCccccccC-CceEEEecCcccCcccccccccccchhccchh
Confidence 57899999999999988866532 1 1111 3688899 55899997522 223455555566
Q ss_pred HHHHHHhC--------CCCCcEEEEEEehhHHHHHHHHHhCCC---ccceEEEEec
Q 025845 67 LMEVLASL--------PAEEKVILVGHSLGGVTLALAADKFPH---KISVAVFVTA 111 (247)
Q Consensus 67 l~~~i~~l--------~~~~~~~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~ 111 (247)
+..+++.+ ....+.+|+|-|+||.-+-.+|...-+ ..+++|++++
T Consensus 179 ~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlss 234 (498)
T COG2939 179 VYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSS 234 (498)
T ss_pred HHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeee
Confidence 55544432 233599999999999877777654322 3566666655
No 195
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=96.87 E-value=0.0019 Score=51.67 Aligned_cols=85 Identities=21% Similarity=0.246 Sum_probs=54.2
Q ss_pred EEEEEcCCCC-ChhhHHHHHHHHHhCCcEEEEecCCCCC-CCCCcccC-ccCHHHhHHHHHHHHHhCCCCCcEEEEEEeh
Q 025845 11 HFVLVHGVNH-GAWCWYKLKARLVAGGHRVTAVDLAASG-INMKRIED-VHTFHAYSEPLMEVLASLPAEEKVILVGHSL 87 (247)
Q Consensus 11 ~iv~lhG~~~-~~~~~~~~~~~l~~~g~~vi~~D~~G~G-~S~~~~~~-~~~~~~~~~~l~~~i~~l~~~~~~~lvGhS~ 87 (247)
-+|+.||+.+ +...|...+....+. +.=..+..+|+- ........ .+==.+.++++.+.+... .++++.++|||+
T Consensus 82 LvVlthGi~~~~~~~~~~~~~~~~kk-~p~~~iv~~g~~~~~~~T~~Gv~~lG~Rla~~~~e~~~~~-si~kISfvghSL 159 (405)
T KOG4372|consen 82 LVVLTHGLHGADMEYWKEKIEQMTKK-MPDKLIVVRGKMNNMCQTFDGVDVLGERLAEEVKETLYDY-SIEKISFVGHSL 159 (405)
T ss_pred EEEeccccccccHHHHHHHHHhhhcC-CCcceEeeeccccchhhccccceeeecccHHHHhhhhhcc-ccceeeeeeeec
Confidence 6899999988 778888888777653 322233334332 22222221 112234566677777767 689999999999
Q ss_pred hHHHHHHHHH
Q 025845 88 GGVTLALAAD 97 (247)
Q Consensus 88 Gg~ia~~~a~ 97 (247)
||.++..+..
T Consensus 160 GGLvar~AIg 169 (405)
T KOG4372|consen 160 GGLVARYAIG 169 (405)
T ss_pred CCeeeeEEEE
Confidence 9998765543
No 196
>PLN00413 triacylglycerol lipase
Probab=96.80 E-value=0.0048 Score=50.68 Aligned_cols=37 Identities=32% Similarity=0.449 Sum_probs=30.3
Q ss_pred HHHhHHHHHHHHHhCCCCCcEEEEEEehhHHHHHHHHH
Q 025845 60 FHAYSEPLMEVLASLPAEEKVILVGHSLGGVTLALAAD 97 (247)
Q Consensus 60 ~~~~~~~l~~~i~~l~~~~~~~lvGhS~Gg~ia~~~a~ 97 (247)
..+..+.+.++++.. ...++++.|||+||.+|..+|.
T Consensus 267 yy~i~~~Lk~ll~~~-p~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 267 YYTILRHLKEIFDQN-PTSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred HHHHHHHHHHHHHHC-CCCeEEEEecCHHHHHHHHHHH
Confidence 345667788888877 6778999999999999988874
No 197
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=96.77 E-value=0.0047 Score=47.57 Aligned_cols=104 Identities=17% Similarity=0.220 Sum_probs=61.3
Q ss_pred CCcEEEEEcCCC--CChhhHHHHHHHHHh---CCcEEEEecCCCCCCCCCcccCcc----CHHHhHHHHHHHHHhC----
Q 025845 8 EEKHFVLVHGVN--HGAWCWYKLKARLVA---GGHRVTAVDLAASGINMKRIEDVH----TFHAYSEPLMEVLASL---- 74 (247)
Q Consensus 8 ~~~~iv~lhG~~--~~~~~~~~~~~~l~~---~g~~vi~~D~~G~G~S~~~~~~~~----~~~~~~~~l~~~i~~l---- 74 (247)
+-|.++++||-- .+...+..+...+.+ ..--+|.+|.-- ........+ ....++++|.=.++.-
T Consensus 97 k~pvl~~~DG~~~~~~g~i~~~~dsli~~g~i~pai~vgid~~d---~~~R~~~~~~n~~~~~~L~~eLlP~v~~~yp~~ 173 (299)
T COG2382 97 KYPVLYLQDGQDWFRSGRIPRILDSLIAAGEIPPAILVGIDYID---VKKRREELHCNEAYWRFLAQELLPYVEERYPTS 173 (299)
T ss_pred cccEEEEeccHHHHhcCChHHHHHHHHHcCCCCCceEEecCCCC---HHHHHHHhcccHHHHHHHHHHhhhhhhccCccc
Confidence 457889999852 223334444344432 123455555431 111111112 3334444444444443
Q ss_pred CCCCcEEEEEEehhHHHHHHHHHhCCCccceEEEEeccCC
Q 025845 75 PAEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMP 114 (247)
Q Consensus 75 ~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 114 (247)
.....-.|.|-|+||.+++..+.++|+++..++.-++...
T Consensus 174 ~~a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~ 213 (299)
T COG2382 174 ADADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFW 213 (299)
T ss_pred ccCCCcEEeccccccHHHHHHHhcCchhhceeeccCCccc
Confidence 1335678999999999999999999999999998887533
No 198
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=96.70 E-value=0.0088 Score=43.27 Aligned_cols=103 Identities=17% Similarity=0.121 Sum_probs=54.2
Q ss_pred EEEEEcCCCCChhh---HHHHHHHHHh----CCcEEEEecCCCCCCCCC-cccCccCHHHhHHHHHHHHHhCCCCCcEEE
Q 025845 11 HFVLVHGVNHGAWC---WYKLKARLVA----GGHRVTAVDLAASGINMK-RIEDVHTFHAYSEPLMEVLASLPAEEKVIL 82 (247)
Q Consensus 11 ~iv~lhG~~~~~~~---~~~~~~~l~~----~g~~vi~~D~~G~G~S~~-~~~~~~~~~~~~~~l~~~i~~l~~~~~~~l 82 (247)
.||+..|.+..... -..+.+.+.+ ....+..+++|-...... ......-..+..+.+.+....- ...+++|
T Consensus 7 ~vi~aRGT~E~~g~~~~g~~~~~~l~~~~g~~~~~~~~V~YpA~~~~~~y~~S~~~G~~~~~~~i~~~~~~C-P~~kivl 85 (179)
T PF01083_consen 7 HVIFARGTGEPPGVGRVGPPFADALQAQPGGTSVAVQGVEYPASLGPNSYGDSVAAGVANLVRLIEEYAARC-PNTKIVL 85 (179)
T ss_dssp EEEEE--TTSSTTTCCCHHHHHHHHHHHCTTCEEEEEE--S---SCGGSCHHHHHHHHHHHHHHHHHHHHHS-TTSEEEE
T ss_pred EEEEecCCCCCCCCccccHHHHHHHHhhcCCCeeEEEecCCCCCCCcccccccHHHHHHHHHHHHHHHHHhC-CCCCEEE
Confidence 46666676543321 1223333332 235566677875432210 0000113444455555555555 5679999
Q ss_pred EEEehhHHHHHHHHHh--C----CCccceEEEEeccCC
Q 025845 83 VGHSLGGVTLALAADK--F----PHKISVAVFVTAFMP 114 (247)
Q Consensus 83 vGhS~Gg~ia~~~a~~--~----p~~v~~lvl~~~~~~ 114 (247)
+|+|.|+.++..++.. . .++|.++|+.+-+..
T Consensus 86 ~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP~~ 123 (179)
T PF01083_consen 86 AGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDPRR 123 (179)
T ss_dssp EEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-TTT
T ss_pred EecccccHHHHHHHHhccCChhhhhhEEEEEEecCCcc
Confidence 9999999999998876 2 357899999887533
No 199
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=96.66 E-value=0.0043 Score=49.35 Aligned_cols=40 Identities=30% Similarity=0.427 Sum_probs=31.1
Q ss_pred CCCcEEEEEEehhHHHHHHHHHhCCC-----ccceEEEEeccCCC
Q 025845 76 AEEKVILVGHSLGGVTLALAADKFPH-----KISVAVFVTAFMPD 115 (247)
Q Consensus 76 ~~~~~~lvGhS~Gg~ia~~~a~~~p~-----~v~~lvl~~~~~~~ 115 (247)
+.+++.|||||+|+.+...+.....+ .|+.+++++++.+.
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~ 262 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPS 262 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCC
Confidence 66799999999999987776654333 48999999986544
No 200
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.64 E-value=0.037 Score=44.11 Aligned_cols=105 Identities=19% Similarity=0.148 Sum_probs=67.2
Q ss_pred CCcEEEEEcCCCCChh-hHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCC-CCCcEEEEEE
Q 025845 8 EEKHFVLVHGVNHGAW-CWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLP-AEEKVILVGH 85 (247)
Q Consensus 8 ~~~~iv~lhG~~~~~~-~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~-~~~~~~lvGh 85 (247)
+..+||.+=||.+..+ ...+......++||.++.+-.|.+-..........+.....+.+.+++...+ ...++++--.
T Consensus 37 s~k~Iv~~~gWag~~~r~l~ky~~~Yq~~g~~~~~~tap~~~~~~~~s~~~~sl~~~~~~l~~L~~~~~~~~~pi~fh~F 116 (350)
T KOG2521|consen 37 SEKPIVVLLGWAGAIDRNLMKYSKIYQDKGYIVVRITAPCPSVFLSASRRILSLSLASTRLSELLSDYNSDPCPIIFHVF 116 (350)
T ss_pred ccccEEEEeeeccccchhHHHHHHHHhcCCceEEEecCcccccccccccccchhhHHHHHHHHHhhhccCCcCceEEEEe
Confidence 3335666666655544 4467777777789999999998775554433333466666677888887772 3557777789
Q ss_pred ehhHHHHHHHH---H-hC-C---CccceEEEEecc
Q 025845 86 SLGGVTLALAA---D-KF-P---HKISVAVFVTAF 112 (247)
Q Consensus 86 S~Gg~ia~~~a---~-~~-p---~~v~~lvl~~~~ 112 (247)
|+||...+... . +. | +.+.++++.+.+
T Consensus 117 S~ng~~~~~si~~~~~~~~~~~~~~~~~~~fdS~p 151 (350)
T KOG2521|consen 117 SGNGVRLMYSISLQLIKHEPKAAQLSGGIIFDSAP 151 (350)
T ss_pred cCCceeehHHHHHHHhhcCchhHhhcCCceEeccc
Confidence 99997654433 2 22 3 245667776664
No 201
>PLN02571 triacylglycerol lipase
Probab=96.59 E-value=0.0039 Score=50.58 Aligned_cols=38 Identities=21% Similarity=0.291 Sum_probs=28.4
Q ss_pred HHhHHHHHHHHHhCCCC-CcEEEEEEehhHHHHHHHHHh
Q 025845 61 HAYSEPLMEVLASLPAE-EKVILVGHSLGGVTLALAADK 98 (247)
Q Consensus 61 ~~~~~~l~~~i~~l~~~-~~~~lvGhS~Gg~ia~~~a~~ 98 (247)
+++.++|..+++..++. -++++.|||+||.+|..+|..
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 55667777777766222 268999999999999888763
No 202
>PLN02454 triacylglycerol lipase
Probab=96.59 E-value=0.0044 Score=50.24 Aligned_cols=34 Identities=35% Similarity=0.505 Sum_probs=23.6
Q ss_pred hHHHHHHHHHhCCCCC--cEEEEEEehhHHHHHHHHH
Q 025845 63 YSEPLMEVLASLPAEE--KVILVGHSLGGVTLALAAD 97 (247)
Q Consensus 63 ~~~~l~~~i~~l~~~~--~~~lvGhS~Gg~ia~~~a~ 97 (247)
+.+.+.++++.. ... ++++.|||+||.+|..+|.
T Consensus 212 vl~~V~~l~~~Y-p~~~~sI~vTGHSLGGALAtLaA~ 247 (414)
T PLN02454 212 LLAKIKELLERY-KDEKLSIVLTGHSLGASLATLAAF 247 (414)
T ss_pred HHHHHHHHHHhC-CCCCceEEEEecCHHHHHHHHHHH
Confidence 334444455544 333 4999999999999998875
No 203
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=96.48 E-value=0.0026 Score=53.60 Aligned_cols=108 Identities=12% Similarity=0.152 Sum_probs=79.0
Q ss_pred CCCCcEEEEEcCCCCCh--hhHHHHHHHHHhCCcEEEEecCCCCCCCCC-------cccCccCHHHhHHHHHHHHHhC-C
Q 025845 6 GMEEKHFVLVHGVNHGA--WCWYKLKARLVAGGHRVTAVDLAASGINMK-------RIEDVHTFHAYSEPLMEVLASL-P 75 (247)
Q Consensus 6 ~~~~~~iv~lhG~~~~~--~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~-------~~~~~~~~~~~~~~l~~~i~~l-~ 75 (247)
++++|-++..+|..+-. -.|..-...|.++|+-....|.||-|.=.. -..+..+++++..-..-+++.- .
T Consensus 467 dg~~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VRGGGe~G~~WHk~G~lakKqN~f~Dfia~AeyLve~gyt 546 (712)
T KOG2237|consen 467 DGSKPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVRGGGEYGEQWHKDGRLAKKQNSFDDFIACAEYLVENGYT 546 (712)
T ss_pred cCCCceEEEEecccceeeccccccceeEEEecceEEEEEeeccCcccccchhhccchhhhcccHHHHHHHHHHHHHcCCC
Confidence 35677777777765422 236655556666888777889999764421 1123568999988888888764 3
Q ss_pred CCCcEEEEEEehhHHHHHHHHHhCCCccceEEEEeccC
Q 025845 76 AEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFM 113 (247)
Q Consensus 76 ~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 113 (247)
..++..+.|.|-||.++-.++..+|+.+..+|+--++.
T Consensus 547 ~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~Vpfm 584 (712)
T KOG2237|consen 547 QPSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFM 584 (712)
T ss_pred CccceeEecccCccchhHHHhccCchHhhhhhhcCcce
Confidence 56899999999999999999999999998888765543
No 204
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=96.38 E-value=0.01 Score=50.43 Aligned_cols=109 Identities=12% Similarity=0.189 Sum_probs=81.3
Q ss_pred CCCCcEEEEEcCCCCChh--hHHHHHHHHHhCCcEEEEecCCCCCCCCC-------cccCccCHHHhHHHHHHHHHhC-C
Q 025845 6 GMEEKHFVLVHGVNHGAW--CWYKLKARLVAGGHRVTAVDLAASGINMK-------RIEDVHTFHAYSEPLMEVLASL-P 75 (247)
Q Consensus 6 ~~~~~~iv~lhG~~~~~~--~~~~~~~~l~~~g~~vi~~D~~G~G~S~~-------~~~~~~~~~~~~~~l~~~i~~l-~ 75 (247)
++++|.++.--|.-|... .|....-.|.++|+=....-.||-|.=.. ...+..|+.++++....+++.- .
T Consensus 445 ~g~~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGGgelG~~WYe~GK~l~K~NTf~DFIa~a~~Lv~~g~~ 524 (682)
T COG1770 445 DGSAPLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGGGELGRAWYEDGKLLNKKNTFTDFIAAARHLVKEGYT 524 (682)
T ss_pred CCCCcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeecccccChHHHHhhhhhhccccHHHHHHHHHHHHHcCcC
Confidence 466778888777765443 36655566777887666666788664422 2234579999999999998865 2
Q ss_pred CCCcEEEEEEehhHHHHHHHHHhCCCccceEEEEeccCC
Q 025845 76 AEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMP 114 (247)
Q Consensus 76 ~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 114 (247)
..+.+.++|-|-||++.-..+...|+..+++|+--|+..
T Consensus 525 ~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVD 563 (682)
T COG1770 525 SPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVD 563 (682)
T ss_pred CccceEEeccCchhHHHHHHHhhChhhhhheeecCCccc
Confidence 446899999999999999999999999999998777643
No 205
>PLN02408 phospholipase A1
Probab=96.33 E-value=0.0073 Score=48.31 Aligned_cols=37 Identities=30% Similarity=0.390 Sum_probs=26.3
Q ss_pred HhHHHHHHHHHhCCCC-CcEEEEEEehhHHHHHHHHHh
Q 025845 62 AYSEPLMEVLASLPAE-EKVILVGHSLGGVTLALAADK 98 (247)
Q Consensus 62 ~~~~~l~~~i~~l~~~-~~~~lvGhS~Gg~ia~~~a~~ 98 (247)
+..+++..+++..++. .++.+.|||+||.+|..+|..
T Consensus 183 qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~d 220 (365)
T PLN02408 183 MVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYD 220 (365)
T ss_pred HHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHH
Confidence 3455666667666222 358999999999999887763
No 206
>PLN02934 triacylglycerol lipase
Probab=96.28 E-value=0.0078 Score=49.91 Aligned_cols=37 Identities=30% Similarity=0.448 Sum_probs=29.9
Q ss_pred HHHhHHHHHHHHHhCCCCCcEEEEEEehhHHHHHHHHH
Q 025845 60 FHAYSEPLMEVLASLPAEEKVILVGHSLGGVTLALAAD 97 (247)
Q Consensus 60 ~~~~~~~l~~~i~~l~~~~~~~lvGhS~Gg~ia~~~a~ 97 (247)
.....+.+.++++.. ...++++.|||+||.+|..+|.
T Consensus 304 y~~v~~~lk~ll~~~-p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 304 YYAVRSKLKSLLKEH-KNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHHHC-CCCeEEEeccccHHHHHHHHHH
Confidence 345667777777777 6779999999999999988874
No 207
>PLN02209 serine carboxypeptidase
Probab=96.19 E-value=0.039 Score=45.80 Aligned_cols=106 Identities=13% Similarity=0.145 Sum_probs=65.8
Q ss_pred CCCcEEEEEcCCCCChhhHHHHHH-----------------------HHHhCCcEEEEecC-CCCCCCCCccc-CccCHH
Q 025845 7 MEEKHFVLVHGVNHGAWCWYKLKA-----------------------RLVAGGHRVTAVDL-AASGINMKRIE-DVHTFH 61 (247)
Q Consensus 7 ~~~~~iv~lhG~~~~~~~~~~~~~-----------------------~l~~~g~~vi~~D~-~G~G~S~~~~~-~~~~~~ 61 (247)
.+.|.|+++.|.+|.+..+..+.+ ... +-.+++-+|. .|.|.|..... ...+-+
T Consensus 66 ~~~Pl~lWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~-~~anllfiDqPvGtGfSy~~~~~~~~~~~ 144 (437)
T PLN02209 66 QEDPLIIWLNGGPGCSCLSGLFFENGPLALKNKVYNGSVPSLVSTTYSWT-KTANIIFLDQPVGSGFSYSKTPIERTSDT 144 (437)
T ss_pred CCCCEEEEECCCCcHHHhhhHHHhcCCceeccCCCCCCcccceeCCCchh-hcCcEEEecCCCCCCccCCCCCCCccCCH
Confidence 357899999999887776532221 111 1257899994 58898864332 112333
Q ss_pred HhHHHHHHHHHhC----C--CCCcEEEEEEehhHHHHHHHHH----hC------CCccceEEEEeccC
Q 025845 62 AYSEPLMEVLASL----P--AEEKVILVGHSLGGVTLALAAD----KF------PHKISVAVFVTAFM 113 (247)
Q Consensus 62 ~~~~~l~~~i~~l----~--~~~~~~lvGhS~Gg~ia~~~a~----~~------p~~v~~lvl~~~~~ 113 (247)
+.++++.+++..+ + ...+++|.|.|+||.-+-.+|. .. +-.++++++.++..
T Consensus 145 ~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng~t 212 (437)
T PLN02209 145 SEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQGYVLGNPIT 212 (437)
T ss_pred HHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCceeeeeEEecCccc
Confidence 4556666666553 2 3468999999999974433332 22 11467888888753
No 208
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=96.06 E-value=0.044 Score=42.64 Aligned_cols=101 Identities=23% Similarity=0.125 Sum_probs=59.4
Q ss_pred CCcEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEecCCCCCCC----------CCcccC-------ccCHHHhHHHHHHH
Q 025845 8 EEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGIN----------MKRIED-------VHTFHAYSEPLMEV 70 (247)
Q Consensus 8 ~~~~iv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S----------~~~~~~-------~~~~~~~~~~l~~~ 70 (247)
.-|.+++.||+++....-......+.+.++.++..+...+|.+ ...... ......+..+....
T Consensus 48 ~~p~v~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (299)
T COG1073 48 KLPAVVFLHGFGSSKEQSLGYAVLLAEKGYRVLAGDASLFGESGGDPRGLADSEGYAEDFSAAVLLLLSEGVLDKDYRLL 127 (299)
T ss_pred cCceEEeccCccccccCcchHHHHhhhceeEEeeeccccccccccccccccCccccccccchhheeeeccccccHHHHHH
Confidence 4577999999999887765577778777788788775322222 211100 00111111121111
Q ss_pred HHhCCCCCcEEEEEEehhHHHHHHHHHhCCC--ccceEEEEec
Q 025845 71 LASLPAEEKVILVGHSLGGVTLALAADKFPH--KISVAVFVTA 111 (247)
Q Consensus 71 i~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~~~ 111 (247)
.. ...+....|+++|+..+...+...+. ....++..+.
T Consensus 128 ~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 167 (299)
T COG1073 128 GA---SLGPRILAGLSLGGPSAGALLAWGPTRLDASRIVVWGE 167 (299)
T ss_pred hh---hcCcceEEEEEeeccchHHHhhcchhHHHhhcccceee
Confidence 21 23689999999999999888887763 2334444433
No 209
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=96.05 E-value=0.035 Score=46.04 Aligned_cols=106 Identities=12% Similarity=0.082 Sum_probs=63.1
Q ss_pred CCCcEEEEEcCCCCChhhHHHHH---H--------------------HHHhCCcEEEEec-CCCCCCCCCcccCcc-CHH
Q 025845 7 MEEKHFVLVHGVNHGAWCWYKLK---A--------------------RLVAGGHRVTAVD-LAASGINMKRIEDVH-TFH 61 (247)
Q Consensus 7 ~~~~~iv~lhG~~~~~~~~~~~~---~--------------------~l~~~g~~vi~~D-~~G~G~S~~~~~~~~-~~~ 61 (247)
.+.|.|+++.|.+|.+..+..+. + ... +-.+++-+| ..|.|.|........ +-.
T Consensus 64 ~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~-~~anllfiDqPvGtGfSy~~~~~~~~~d~ 142 (433)
T PLN03016 64 KEDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWT-KMANIIFLDQPVGSGFSYSKTPIDKTGDI 142 (433)
T ss_pred ccCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccCCCCCceeeCCCchh-hcCcEEEecCCCCCCccCCCCCCCccCCH
Confidence 35689999999988776432111 1 112 126899999 558999964432111 112
Q ss_pred HhHHHHHHHHHh----CC--CCCcEEEEEEehhHHHHHHHHH----hC------CCccceEEEEeccC
Q 025845 62 AYSEPLMEVLAS----LP--AEEKVILVGHSLGGVTLALAAD----KF------PHKISVAVFVTAFM 113 (247)
Q Consensus 62 ~~~~~l~~~i~~----l~--~~~~~~lvGhS~Gg~ia~~~a~----~~------p~~v~~lvl~~~~~ 113 (247)
+.++++.+++.. .+ ...+++|.|.|+||..+-.+|. .. +-.++++++-++..
T Consensus 143 ~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~t 210 (433)
T PLN03016 143 SEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPVT 210 (433)
T ss_pred HHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCCcccceeeEecCCCc
Confidence 233455554443 32 4578999999999974433333 21 12477888877753
No 210
>PLN02324 triacylglycerol lipase
Probab=96.03 E-value=0.012 Score=47.72 Aligned_cols=36 Identities=31% Similarity=0.397 Sum_probs=26.2
Q ss_pred HhHHHHHHHHHhCCC-CCcEEEEEEehhHHHHHHHHH
Q 025845 62 AYSEPLMEVLASLPA-EEKVILVGHSLGGVTLALAAD 97 (247)
Q Consensus 62 ~~~~~l~~~i~~l~~-~~~~~lvGhS~Gg~ia~~~a~ 97 (247)
+..++|..+++..++ ...+.+.|||+||.+|..+|.
T Consensus 198 qVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~ 234 (415)
T PLN02324 198 QVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAA 234 (415)
T ss_pred HHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHH
Confidence 345566667776622 236899999999999988875
No 211
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=96.01 E-value=0.013 Score=47.29 Aligned_cols=104 Identities=16% Similarity=0.152 Sum_probs=79.3
Q ss_pred CCCCcEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEecCCCCCCCCCcccC--ccCHHHhHHHHHHHHHhCC--CCCcEE
Q 025845 6 GMEEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIED--VHTFHAYSEPLMEVLASLP--AEEKVI 81 (247)
Q Consensus 6 ~~~~~~iv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~--~~~~~~~~~~l~~~i~~l~--~~~~~~ 81 (247)
+-+.|+|++.-|.+.+..-...-...|. +-+-+.+.+|=||.|.+.+.. ..++.+-|.|...+++.+. -..+++
T Consensus 60 ~~drPtV~~T~GY~~~~~p~r~Ept~Ll--d~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~iY~~kWI 137 (448)
T PF05576_consen 60 DFDRPTVLYTEGYNVSTSPRRSEPTQLL--DGNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKPIYPGKWI 137 (448)
T ss_pred CCCCCeEEEecCcccccCccccchhHhh--ccceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHhhccCCce
Confidence 3467999999999876544433233444 247889999999999766542 4699999999988887772 236899
Q ss_pred EEEEehhHHHHHHHHHhCCCccceEEE-Eec
Q 025845 82 LVGHSLGGVTLALAADKFPHKISVAVF-VTA 111 (247)
Q Consensus 82 lvGhS~Gg~ia~~~a~~~p~~v~~lvl-~~~ 111 (247)
--|-|-||+.++.+=.-||+.|.+.|- ++|
T Consensus 138 STG~SKGGmTa~y~rrFyP~DVD~tVaYVAP 168 (448)
T PF05576_consen 138 STGGSKGGMTAVYYRRFYPDDVDGTVAYVAP 168 (448)
T ss_pred ecCcCCCceeEEEEeeeCCCCCCeeeeeecc
Confidence 999999999999998889999998874 444
No 212
>PLN02310 triacylglycerol lipase
Probab=95.91 E-value=0.029 Score=45.57 Aligned_cols=37 Identities=24% Similarity=0.324 Sum_probs=26.6
Q ss_pred HHhHHHHHHHHHhCC---CCCcEEEEEEehhHHHHHHHHH
Q 025845 61 HAYSEPLMEVLASLP---AEEKVILVGHSLGGVTLALAAD 97 (247)
Q Consensus 61 ~~~~~~l~~~i~~l~---~~~~~~lvGhS~Gg~ia~~~a~ 97 (247)
++..+.+..+++... ...++.+.|||+||.+|..+|.
T Consensus 189 ~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~ 228 (405)
T PLN02310 189 EQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAY 228 (405)
T ss_pred HHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHH
Confidence 445566666666541 2347999999999999988874
No 213
>PLN02802 triacylglycerol lipase
Probab=95.88 E-value=0.016 Score=48.19 Aligned_cols=36 Identities=25% Similarity=0.386 Sum_probs=25.9
Q ss_pred HhHHHHHHHHHhCCCC-CcEEEEEEehhHHHHHHHHH
Q 025845 62 AYSEPLMEVLASLPAE-EKVILVGHSLGGVTLALAAD 97 (247)
Q Consensus 62 ~~~~~l~~~i~~l~~~-~~~~lvGhS~Gg~ia~~~a~ 97 (247)
+..+++..+++...+. ..+++.|||+||.+|..+|.
T Consensus 313 qVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~ 349 (509)
T PLN02802 313 SVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVAD 349 (509)
T ss_pred HHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHH
Confidence 4455666666665222 36899999999999988775
No 214
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=95.85 E-value=0.0082 Score=35.05 Aligned_cols=21 Identities=19% Similarity=0.359 Sum_probs=12.7
Q ss_pred CCCCCcEEEEEcCCCCChhhH
Q 025845 5 VGMEEKHFVLVHGVNHGAWCW 25 (247)
Q Consensus 5 ~~~~~~~iv~lhG~~~~~~~~ 25 (247)
....+|||++.||+.+++..|
T Consensus 39 ~~~~k~pVll~HGL~~ss~~w 59 (63)
T PF04083_consen 39 QNKKKPPVLLQHGLLQSSDDW 59 (63)
T ss_dssp TTTT--EEEEE--TT--GGGG
T ss_pred cCCCCCcEEEECCcccChHHH
Confidence 346789999999999999988
No 215
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=95.82 E-value=0.012 Score=38.35 Aligned_cols=43 Identities=7% Similarity=-0.155 Sum_probs=39.4
Q ss_pred HHhhhhhhccchhHHHHHHHHHHHhhcCCcceeeecCCCccccc
Q 025845 190 LRQIVSYLYLDSDTMQIMLNFIIIIIITTHMSELINCSRRAFFL 233 (247)
Q Consensus 190 ~~~~l~~g~~D~~~p~~~~~~~~~~~~~~~~~~~i~~~gH~~~~ 233 (247)
.+.++.+++.|..+|..-++.++ +.+++++++.+++.||..+.
T Consensus 35 ~piL~l~~~~Dp~TP~~~a~~~~-~~l~~s~lvt~~g~gHg~~~ 77 (103)
T PF08386_consen 35 PPILVLGGTHDPVTPYEGARAMA-ARLPGSRLVTVDGAGHGVYA 77 (103)
T ss_pred CCEEEEecCcCCCCcHHHHHHHH-HHCCCceEEEEeccCcceec
Confidence 55667779999999999999999 99999999999999999886
No 216
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=95.75 E-value=0.036 Score=44.66 Aligned_cols=136 Identities=14% Similarity=0.072 Sum_probs=73.0
Q ss_pred CCCcEEEEEEehhHHHHHHHHHhCCCccceEEEEeccCCCCCCChHHHHHHHHHhhcCCCCcccccccccccCCCCcccc
Q 025845 76 AEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHIS 155 (247)
Q Consensus 76 ~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (247)
.++++++.|.|==|..++..|. ...||++++=+.-.. ..... .+....+.+. ..|-.....++..+-. .
T Consensus 170 ~i~~FvV~GaSKRGWTtWltaa-~D~RV~aivP~Vid~---LN~~~-~l~h~y~~yG---~~ws~a~~dY~~~gi~---~ 238 (367)
T PF10142_consen 170 NIEKFVVTGASKRGWTTWLTAA-VDPRVKAIVPIVIDV---LNMKA-NLEHQYRSYG---GNWSFAFQDYYNEGIT---Q 238 (367)
T ss_pred CccEEEEeCCchHhHHHHHhhc-cCcceeEEeeEEEcc---CCcHH-HHHHHHHHhC---CCCccchhhhhHhCch---h
Confidence 5799999999999999999998 567899888444322 22222 3333333331 0221111111111100 1
Q ss_pred eeechhhHHHHHhcCCCcchhhhhhhhhcccchhHHhhhhhhccchhHHHHHHHHHHHhhcCC-cceeeecCCCccccc
Q 025845 156 MLFGREFLTIKIYQLCPPEVINLLRITFIGRAIVLRQIVSYLYLDSDTMQIMLNFIIIIIITT-HMSELINCSRRAFFL 233 (247)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~D~~~p~~~~~~~~~~~~~~-~~~~~i~~~gH~~~~ 233 (247)
....+.+ ..+.. ..--+....+..++..+..+..|....+.....+. ..+|+ ..+.++||++|..--
T Consensus 239 ~l~tp~f-~~L~~---------ivDP~~Y~~rL~~PK~ii~atgDeFf~pD~~~~y~-d~L~G~K~lr~vPN~~H~~~~ 306 (367)
T PF10142_consen 239 QLDTPEF-DKLMQ---------IVDPYSYRDRLTMPKYIINATGDEFFVPDSSNFYY-DKLPGEKYLRYVPNAGHSLIG 306 (367)
T ss_pred hcCCHHH-HHHHH---------hcCHHHHHHhcCccEEEEecCCCceeccCchHHHH-hhCCCCeeEEeCCCCCcccch
Confidence 1111111 11110 00011111333455556668788777777777666 77775 558999999998554
No 217
>PLN03037 lipase class 3 family protein; Provisional
Probab=95.69 E-value=0.019 Score=47.89 Aligned_cols=37 Identities=27% Similarity=0.371 Sum_probs=26.9
Q ss_pred HHhHHHHHHHHHhCC---CCCcEEEEEEehhHHHHHHHHH
Q 025845 61 HAYSEPLMEVLASLP---AEEKVILVGHSLGGVTLALAAD 97 (247)
Q Consensus 61 ~~~~~~l~~~i~~l~---~~~~~~lvGhS~Gg~ia~~~a~ 97 (247)
++..++|..+++... ...++.+.|||+||.+|...|.
T Consensus 298 eQVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~ 337 (525)
T PLN03037 298 EQVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAY 337 (525)
T ss_pred HHHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHH
Confidence 345566777776652 1346999999999999988774
No 218
>PLN02753 triacylglycerol lipase
Probab=95.63 E-value=0.021 Score=47.69 Aligned_cols=37 Identities=22% Similarity=0.320 Sum_probs=26.5
Q ss_pred HHhHHHHHHHHHhCCC----CCcEEEEEEehhHHHHHHHHH
Q 025845 61 HAYSEPLMEVLASLPA----EEKVILVGHSLGGVTLALAAD 97 (247)
Q Consensus 61 ~~~~~~l~~~i~~l~~----~~~~~lvGhS~Gg~ia~~~a~ 97 (247)
++..+.|..+++..++ ..++.+.|||+||.+|..+|.
T Consensus 291 eQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~ 331 (531)
T PLN02753 291 EQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAY 331 (531)
T ss_pred HHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHH
Confidence 3445556666665521 358999999999999988875
No 219
>PLN02719 triacylglycerol lipase
Probab=95.48 E-value=0.026 Score=46.99 Aligned_cols=37 Identities=24% Similarity=0.346 Sum_probs=25.9
Q ss_pred HHhHHHHHHHHHhCCC----CCcEEEEEEehhHHHHHHHHH
Q 025845 61 HAYSEPLMEVLASLPA----EEKVILVGHSLGGVTLALAAD 97 (247)
Q Consensus 61 ~~~~~~l~~~i~~l~~----~~~~~lvGhS~Gg~ia~~~a~ 97 (247)
++..+.|..+++..++ ..++.+.|||+||.+|..+|.
T Consensus 277 eQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~ 317 (518)
T PLN02719 277 EQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAY 317 (518)
T ss_pred HHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHH
Confidence 3344555666665521 247999999999999988775
No 220
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=95.46 E-value=0.38 Score=31.02 Aligned_cols=84 Identities=20% Similarity=0.212 Sum_probs=56.4
Q ss_pred hHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCCcEEEEEEehhHH--HHHHHHHhCCC
Q 025845 24 CWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGV--TLALAADKFPH 101 (247)
Q Consensus 24 ~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~lvGhS~Gg~--ia~~~a~~~p~ 101 (247)
.+..+.+.+...|+..-.+.++..|.+....-.....+.=...+..+++.+ ...+++|||=|--.= +-..+|.++|+
T Consensus 12 ly~~l~~Fl~~~~~P~G~~~Lr~~~~~~~~~~~~~~~~~K~~~i~~i~~~f-P~~kfiLIGDsgq~DpeiY~~ia~~~P~ 90 (100)
T PF09949_consen 12 LYPFLRDFLRRNGFPAGPLLLRDYGPSLSGLFKSGAEEHKRDNIERILRDF-PERKFILIGDSGQHDPEIYAEIARRFPG 90 (100)
T ss_pred HHHHHHHHHHhcCCCCCceEcccCCccccccccCCchhHHHHHHHHHHHHC-CCCcEEEEeeCCCcCHHHHHHHHHHCCC
Confidence 355666666666787777777777655332211111134456677788888 788999999886653 44567889999
Q ss_pred ccceEEE
Q 025845 102 KISVAVF 108 (247)
Q Consensus 102 ~v~~lvl 108 (247)
+|.++.+
T Consensus 91 ~i~ai~I 97 (100)
T PF09949_consen 91 RILAIYI 97 (100)
T ss_pred CEEEEEE
Confidence 9988754
No 221
>PLN02761 lipase class 3 family protein
Probab=95.26 E-value=0.034 Score=46.43 Aligned_cols=36 Identities=19% Similarity=0.235 Sum_probs=25.1
Q ss_pred HhHHHHHHHHHhCC-----CCCcEEEEEEehhHHHHHHHHH
Q 025845 62 AYSEPLMEVLASLP-----AEEKVILVGHSLGGVTLALAAD 97 (247)
Q Consensus 62 ~~~~~l~~~i~~l~-----~~~~~~lvGhS~Gg~ia~~~a~ 97 (247)
+..+.|..+++..+ ..-++.+.|||+||.+|...|.
T Consensus 273 qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 273 QVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAY 313 (527)
T ss_pred HHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHH
Confidence 44555566665541 1237999999999999988774
No 222
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.24 E-value=0.058 Score=37.62 Aligned_cols=77 Identities=16% Similarity=0.141 Sum_probs=53.1
Q ss_pred cEEEEEcCCCCChhhHHHHHHHHHhCCcE-EEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCCcEEEEEEehh
Q 025845 10 KHFVLVHGVNHGAWCWYKLKARLVAGGHR-VTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLG 88 (247)
Q Consensus 10 ~~iv~lhG~~~~~~~~~~~~~~l~~~g~~-vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~lvGhS~G 88 (247)
-.||++-|++..++.++.++. . +++. ++++|+...-.. .++ . ..+.+-||++|||
T Consensus 12 ~LIvyFaGwgtpps~v~HLil--p-eN~dl~lcYDY~dl~ld-------fDf-----------s---Ay~hirlvAwSMG 67 (214)
T COG2830 12 HLIVYFAGWGTPPSAVNHLIL--P-ENHDLLLCYDYQDLNLD-------FDF-----------S---AYRHIRLVAWSMG 67 (214)
T ss_pred EEEEEEecCCCCHHHHhhccC--C-CCCcEEEEeehhhcCcc-------cch-----------h---hhhhhhhhhhhHH
Confidence 478999999999998887653 3 3454 567887744211 111 1 2346679999999
Q ss_pred HHHHHHHHHhCCCccceEEEEecc
Q 025845 89 GVTLALAADKFPHKISVAVFVTAF 112 (247)
Q Consensus 89 g~ia~~~a~~~p~~v~~lvl~~~~ 112 (247)
-.+|-......+ .++.+.+++.
T Consensus 68 VwvAeR~lqg~~--lksatAiNGT 89 (214)
T COG2830 68 VWVAERVLQGIR--LKSATAINGT 89 (214)
T ss_pred HHHHHHHHhhcc--ccceeeecCC
Confidence 999999988764 6777767663
No 223
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.07 E-value=0.062 Score=45.37 Aligned_cols=52 Identities=19% Similarity=0.337 Sum_probs=34.1
Q ss_pred HHhHHHHHHHHHhC-----CCCCcEEEEEEehhHHHHHHHHHh-----CCC------ccceEEEEecc
Q 025845 61 HAYSEPLMEVLASL-----PAEEKVILVGHSLGGVTLALAADK-----FPH------KISVAVFVTAF 112 (247)
Q Consensus 61 ~~~~~~l~~~i~~l-----~~~~~~~lvGhS~Gg~ia~~~a~~-----~p~------~v~~lvl~~~~ 112 (247)
...+....++++++ ++.+++..|||||||.++-.+... .|+ ..+++|+++.+
T Consensus 504 ~sl~~Rs~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~P 571 (697)
T KOG2029|consen 504 RSLAARSNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVP 571 (697)
T ss_pred hHHHHHHHHHHHHHHHhccCCCCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecC
Confidence 33444444444443 346899999999999987665442 233 36789988875
No 224
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=95.06 E-value=0.086 Score=42.00 Aligned_cols=77 Identities=14% Similarity=0.148 Sum_probs=47.3
Q ss_pred cEEEEecCC-CCCCCCCcccCc-cCHHHhHHHHHHHHHh----CC--CCCcEEEEEEehhHHHHHHHHH----hC-----
Q 025845 37 HRVTAVDLA-ASGINMKRIEDV-HTFHAYSEPLMEVLAS----LP--AEEKVILVGHSLGGVTLALAAD----KF----- 99 (247)
Q Consensus 37 ~~vi~~D~~-G~G~S~~~~~~~-~~~~~~~~~l~~~i~~----l~--~~~~~~lvGhS~Gg~ia~~~a~----~~----- 99 (247)
.+++-+|.| |-|.|-...... .+-+..++++..+|.. .+ ...+++|.|-|+||..+=.+|. ..
T Consensus 2 aNvLfiDqPvGvGfSy~~~~~~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~ 81 (319)
T PLN02213 2 ANIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCE 81 (319)
T ss_pred ccEEEecCCCCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccccC
Confidence 368899998 899886543221 1222334565555554 32 5689999999999975433333 21
Q ss_pred -CCccceEEEEeccC
Q 025845 100 -PHKISVAVFVTAFM 113 (247)
Q Consensus 100 -p~~v~~lvl~~~~~ 113 (247)
+-.++++++-++..
T Consensus 82 ~~inLkGi~IGNg~t 96 (319)
T PLN02213 82 PPINLQGYMLGNPVT 96 (319)
T ss_pred CceeeeEEEeCCCCC
Confidence 11467888777653
No 225
>PLN02847 triacylglycerol lipase
Probab=95.05 E-value=0.045 Score=46.42 Aligned_cols=27 Identities=44% Similarity=0.575 Sum_probs=20.8
Q ss_pred HHHhCCCCCcEEEEEEehhHHHHHHHHH
Q 025845 70 VLASLPAEEKVILVGHSLGGVTLALAAD 97 (247)
Q Consensus 70 ~i~~l~~~~~~~lvGhS~Gg~ia~~~a~ 97 (247)
.+... ..-+++++|||+||.+|..++.
T Consensus 244 al~~~-PdYkLVITGHSLGGGVAALLAi 270 (633)
T PLN02847 244 ALDEY-PDFKIKIVGHSLGGGTAALLTY 270 (633)
T ss_pred HHHHC-CCCeEEEeccChHHHHHHHHHH
Confidence 33334 4568999999999999988765
No 226
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=94.77 E-value=0.12 Score=44.55 Aligned_cols=104 Identities=14% Similarity=0.086 Sum_probs=57.9
Q ss_pred CcEEEEEcCCC---CChhhHHHHH--HHHHhCCcEEEEecCC----CCCCCCC-cccCccCHHHh---HHHHHHHHHhC-
Q 025845 9 EKHFVLVHGVN---HGAWCWYKLK--ARLVAGGHRVTAVDLA----ASGINMK-RIEDVHTFHAY---SEPLMEVLASL- 74 (247)
Q Consensus 9 ~~~iv~lhG~~---~~~~~~~~~~--~~l~~~g~~vi~~D~~----G~G~S~~-~~~~~~~~~~~---~~~l~~~i~~l- 74 (247)
-|++|++||.+ ++...+.... ..+..++.=|+.+.+| |+..... ..+..+.+.++ .+.+.+-|...
T Consensus 112 ~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~~gN~gl~Dq~~AL~wv~~~I~~FG 191 (545)
T KOG1516|consen 112 LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSAAPGNLGLFDQLLALRWVKDNIPSFG 191 (545)
T ss_pred CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecCCCCCCCcccHHHHHHHHHHHHHHHHhcC
Confidence 58899999985 3333332222 2222233456666665 3222211 11122344444 44555666666
Q ss_pred CCCCcEEEEEEehhHHHHHHHHHh--CCCccceEEEEecc
Q 025845 75 PAEEKVILVGHSLGGVTLALAADK--FPHKISVAVFVTAF 112 (247)
Q Consensus 75 ~~~~~~~lvGhS~Gg~ia~~~a~~--~p~~v~~lvl~~~~ 112 (247)
++.+++.|+|||-||..+..+... ......+.|..++.
T Consensus 192 Gdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~ 231 (545)
T KOG1516|consen 192 GDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGN 231 (545)
T ss_pred CCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhccc
Confidence 356899999999999988666541 12345666666553
No 227
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=94.48 E-value=0.069 Score=42.81 Aligned_cols=36 Identities=28% Similarity=0.397 Sum_probs=30.7
Q ss_pred HHhHHHHHHHHHhCCCCCcEEEEEEehhHHHHHHHHH
Q 025845 61 HAYSEPLMEVLASLPAEEKVILVGHSLGGVTLALAAD 97 (247)
Q Consensus 61 ~~~~~~l~~~i~~l~~~~~~~lvGhS~Gg~ia~~~a~ 97 (247)
..+.+++..+++.. ..-++.+-|||+||.+|..+|.
T Consensus 155 ~~~~~~~~~L~~~~-~~~~i~vTGHSLGgAlA~laa~ 190 (336)
T KOG4569|consen 155 SGLDAELRRLIELY-PNYSIWVTGHSLGGALASLAAL 190 (336)
T ss_pred HHHHHHHHHHHHhc-CCcEEEEecCChHHHHHHHHHH
Confidence 56778888888888 6789999999999999988775
No 228
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=93.95 E-value=0.16 Score=43.04 Aligned_cols=104 Identities=14% Similarity=0.150 Sum_probs=71.0
Q ss_pred CCcEEEEEcCCCCChh--hHHHHHHHHHhCCcEEEEecCCCCCCCCCcc-------cCccCHHHhHHHHHHHHHhC-CCC
Q 025845 8 EEKHFVLVHGVNHGAW--CWYKLKARLVAGGHRVTAVDLAASGINMKRI-------EDVHTFHAYSEPLMEVLASL-PAE 77 (247)
Q Consensus 8 ~~~~iv~lhG~~~~~~--~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~-------~~~~~~~~~~~~l~~~i~~l-~~~ 77 (247)
+.|++|+--|...-+. .|........++|...+..++||-|.=.+.- .....++++++...++++.- ...
T Consensus 420 ~~pTll~aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIRGGGEfGp~WH~Aa~k~nrq~vfdDf~AVaedLi~rgitsp 499 (648)
T COG1505 420 ENPTLLYAYGGFNISLTPRFSGSRKLWLERGGVFVLANIRGGGEFGPEWHQAGMKENKQNVFDDFIAVAEDLIKRGITSP 499 (648)
T ss_pred CCceEEEeccccccccCCccchhhHHHHhcCCeEEEEecccCCccCHHHHHHHhhhcchhhhHHHHHHHHHHHHhCCCCH
Confidence 4667766655543222 2444445555589999999999987553210 12347777777777777754 234
Q ss_pred CcEEEEEEehhHHHHHHHHHhCCCccceEEEEec
Q 025845 78 EKVILVGHSLGGVTLALAADKFPHKISVAVFVTA 111 (247)
Q Consensus 78 ~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~ 111 (247)
+++-+-|-|-||.+.-.+.-++|+...++|+--|
T Consensus 500 e~lgi~GgSNGGLLvg~alTQrPelfgA~v~evP 533 (648)
T COG1505 500 EKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVP 533 (648)
T ss_pred HHhhhccCCCCceEEEeeeccChhhhCceeeccc
Confidence 6888999999999888778899998888875433
No 229
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=93.70 E-value=0.069 Score=45.25 Aligned_cols=95 Identities=14% Similarity=0.089 Sum_probs=59.7
Q ss_pred CCcEEEEEcCCC--CChhh----HHHHHHHHHhCCcEEEEecCCC-CCCCCCcccCccCHHHhHHHHHHHHH--------
Q 025845 8 EEKHFVLVHGVN--HGAWC----WYKLKARLVAGGHRVTAVDLAA-SGINMKRIEDVHTFHAYSEPLMEVLA-------- 72 (247)
Q Consensus 8 ~~~~iv~lhG~~--~~~~~----~~~~~~~l~~~g~~vi~~D~~G-~G~S~~~~~~~~~~~~~~~~l~~~i~-------- 72 (247)
..|.++++||.+ ..... |........ +-..|.+||++. .|. .++..-++.+..+..
T Consensus 175 ~spl~i~aps~p~ap~tSd~~~~wqs~lsl~g-evvev~tfdl~n~igG--------~nI~h~ae~~vSf~r~kvlei~g 245 (784)
T KOG3253|consen 175 ASPLAIKAPSTPLAPKTSDRMWSWQSRLSLKG-EVVEVPTFDLNNPIGG--------ANIKHAAEYSVSFDRYKVLEITG 245 (784)
T ss_pred CCceEEeccCCCCCCccchHHHhHHHHHhhhc-eeeeeccccccCCCCC--------cchHHHHHHHHHHhhhhhhhhhc
Confidence 357889999987 12222 333333333 336788888873 221 345555555555444
Q ss_pred hCCCCCcEEEEEEehhHHHHHHHHHh-CCCccceEEEEecc
Q 025845 73 SLPAEEKVILVGHSLGGVTLALAADK-FPHKISVAVFVTAF 112 (247)
Q Consensus 73 ~l~~~~~~~lvGhS~Gg~ia~~~a~~-~p~~v~~lvl~~~~ 112 (247)
++ ...+++|+|.|||+.++.+.+.- +..-|.++|.++=+
T Consensus 246 ef-pha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigyp 285 (784)
T KOG3253|consen 246 EF-PHAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYP 285 (784)
T ss_pred cC-CCCceEEEecccCceeeEEeccccCCceEEEEEEeccc
Confidence 33 56899999999999888777653 33458888888754
No 230
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=93.67 E-value=0.28 Score=34.81 Aligned_cols=102 Identities=13% Similarity=0.041 Sum_probs=59.5
Q ss_pred CCcEEEEEcCCCCChhhHH------HHHHHHHhCCcEEEEecCCCCCCCCCcccC---ccCHHHhHHHHHHHHHhCCCCC
Q 025845 8 EEKHFVLVHGVNHGAWCWY------KLKARLVAGGHRVTAVDLAASGINMKRIED---VHTFHAYSEPLMEVLASLPAEE 78 (247)
Q Consensus 8 ~~~~iv~lhG~~~~~~~~~------~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~---~~~~~~~~~~l~~~i~~l~~~~ 78 (247)
.|.|||.++-.+|.-..++ .+++.+. .| .|-.+-+-|-..-+--... ........+--.-+++.. -..
T Consensus 25 aG~pVvvFpts~Grf~eyed~G~v~ala~fie-~G-~vQlft~~gldsESf~a~h~~~adr~~rH~AyerYv~eEa-lpg 101 (227)
T COG4947 25 AGIPVVVFPTSGGRFNEYEDFGMVDALASFIE-EG-LVQLFTLSGLDSESFLATHKNAADRAERHRAYERYVIEEA-LPG 101 (227)
T ss_pred CCCcEEEEecCCCcchhhhhcccHHHHHHHHh-cC-cEEEEEecccchHhHhhhcCCHHHHHHHHHHHHHHHHHhh-cCC
Confidence 4567777777777766653 3444444 44 3444444443211111110 112222222223344433 234
Q ss_pred cEEEEEEehhHHHHHHHHHhCCCccceEEEEecc
Q 025845 79 KVILVGHSLGGVTLALAADKFPHKISVAVFVTAF 112 (247)
Q Consensus 79 ~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 112 (247)
...+-|-||||..|..+..++|+...++|.++..
T Consensus 102 s~~~sgcsmGayhA~nfvfrhP~lftkvialSGv 135 (227)
T COG4947 102 STIVSGCSMGAYHAANFVFRHPHLFTKVIALSGV 135 (227)
T ss_pred CccccccchhhhhhhhhheeChhHhhhheeecce
Confidence 5777899999999999999999999999988874
No 231
>PRK12467 peptide synthase; Provisional
Probab=93.59 E-value=0.72 Score=49.21 Aligned_cols=102 Identities=16% Similarity=0.071 Sum_probs=74.8
Q ss_pred CcEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCCcEEEEEEehh
Q 025845 9 EKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLG 88 (247)
Q Consensus 9 ~~~iv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~lvGhS~G 88 (247)
-+.+++.|...++...+.++...+. .+..++.+..++.-..... ..+++.++....+.+.......+..+.|+|+|
T Consensus 3692 ~~~l~~~h~~~r~~~~~~~l~~~l~-~~~~~~~l~~~~~~~d~~~---~~~~~~~~~~y~~~~~~~~~~~p~~l~g~s~g 3767 (3956)
T PRK12467 3692 FPALFCRHEGLGTVFDYEPLAVILE-GDRHVLGLTCRHLLDDGWQ---DTSLQAMAVQYADYILWQQAKGPYGLLGWSLG 3767 (3956)
T ss_pred ccceeeechhhcchhhhHHHHHHhC-CCCcEEEEeccccccccCC---ccchHHHHHHHHHHHHHhccCCCeeeeeeecc
Confidence 3569999999999888888888886 3578888887765322222 24788888888888877644568999999999
Q ss_pred HHHHHHHHHh---CCCccceEEEEeccCC
Q 025845 89 GVTLALAADK---FPHKISVAVFVTAFMP 114 (247)
Q Consensus 89 g~ia~~~a~~---~p~~v~~lvl~~~~~~ 114 (247)
|.++..++.. ..+.+.-+.++....+
T Consensus 3768 ~~~a~~~~~~l~~~g~~~~~~~~~~~~~~ 3796 (3956)
T PRK12467 3768 GTLARLVAELLEREGESEAFLGLFDNTLP 3796 (3956)
T ss_pred hHHHHHHHHHHHHcCCceeEEEEEecccc
Confidence 9999888763 3455666666655433
No 232
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=93.37 E-value=0.43 Score=40.30 Aligned_cols=83 Identities=14% Similarity=0.201 Sum_probs=58.4
Q ss_pred HHHHHHhCCcEEEEecCCCCCCCCC--ccc---C--------ccCHHHhHHHHHHHHHhC--CCCCcEEEEEEehhHHHH
Q 025845 28 LKARLVAGGHRVTAVDLAASGINMK--RIE---D--------VHTFHAYSEPLMEVLASL--PAEEKVILVGHSLGGVTL 92 (247)
Q Consensus 28 ~~~~l~~~g~~vi~~D~~G~G~S~~--~~~---~--------~~~~~~~~~~l~~~i~~l--~~~~~~~lvGhS~Gg~ia 92 (247)
+...++ +||.++.-| -||..+.. ... . ...+...+..-.++++.+ ...+.-...|.|-||.=+
T Consensus 52 ~~~~~~-~G~A~~~TD-~Gh~~~~~~~~~~~~~n~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqg 129 (474)
T PF07519_consen 52 MATALA-RGYATASTD-SGHQGSAGSDDASFGNNPEALLDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQG 129 (474)
T ss_pred cchhhh-cCeEEEEec-CCCCCCcccccccccCCHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchH
Confidence 456676 799999999 56665533 110 0 112333344444555555 245788899999999999
Q ss_pred HHHHHhCCCccceEEEEecc
Q 025845 93 ALAADKFPHKISVAVFVTAF 112 (247)
Q Consensus 93 ~~~a~~~p~~v~~lvl~~~~ 112 (247)
+..|++||+..+++|.-+|.
T Consensus 130 l~~AQryP~dfDGIlAgaPA 149 (474)
T PF07519_consen 130 LMAAQRYPEDFDGILAGAPA 149 (474)
T ss_pred HHHHHhChhhcCeEEeCCch
Confidence 99999999999999988774
No 233
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=92.06 E-value=1 Score=33.87 Aligned_cols=77 Identities=21% Similarity=0.113 Sum_probs=46.9
Q ss_pred CcEEEEecCCCC-CCC-C-CcccCccCHHHhHHHHHHHHHhC-CCCCcEEEEEEehhHHHHHHHHHhC-----CC-ccce
Q 025845 36 GHRVTAVDLAAS-GIN-M-KRIEDVHTFHAYSEPLMEVLASL-PAEEKVILVGHSLGGVTLALAADKF-----PH-KISV 105 (247)
Q Consensus 36 g~~vi~~D~~G~-G~S-~-~~~~~~~~~~~~~~~l~~~i~~l-~~~~~~~lvGhS~Gg~ia~~~a~~~-----p~-~v~~ 105 (247)
|+.+..+++|.. +-- . .......++.+=++.+.+.|... ...++++++|+|.|+.++...+.+. +. ....
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~l~~~~~~~~~~l~ 81 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRRLAADGDPPPDDLS 81 (225)
T ss_pred CcceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHHHHhcCCCCcCceE
Confidence 577888888861 110 0 01111246666666677666653 2457999999999999987766543 11 2445
Q ss_pred EEEEecc
Q 025845 106 AVFVTAF 112 (247)
Q Consensus 106 lvl~~~~ 112 (247)
.|+++-+
T Consensus 82 fVl~gnP 88 (225)
T PF08237_consen 82 FVLIGNP 88 (225)
T ss_pred EEEecCC
Confidence 6666654
No 234
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=91.20 E-value=6.1 Score=30.96 Aligned_cols=104 Identities=11% Similarity=0.060 Sum_probs=71.5
Q ss_pred CcEEEEEcCCCCChh-hHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCCcEEEEEEeh
Q 025845 9 EKHFVLVHGVNHGAW-CWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSL 87 (247)
Q Consensus 9 ~~~iv~lhG~~~~~~-~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~lvGhS~ 87 (247)
.|.|+++-.+.|+.. ..+...+.|. ....|+.-||.-.-.-+-.. ...+++++++-+.+.|..+ +. ++++++-+.
T Consensus 103 dPkvLivapmsGH~aTLLR~TV~alL-p~~~vyitDW~dAr~Vp~~~-G~FdldDYIdyvie~~~~~-Gp-~~hv~aVCQ 178 (415)
T COG4553 103 DPKVLIVAPMSGHYATLLRGTVEALL-PYHDVYITDWVDARMVPLEA-GHFDLDDYIDYVIEMINFL-GP-DAHVMAVCQ 178 (415)
T ss_pred CCeEEEEecccccHHHHHHHHHHHhc-cccceeEeeccccceeeccc-CCccHHHHHHHHHHHHHHh-CC-CCcEEEEec
Confidence 346666666666544 4667777777 35789999997543332222 3579999999999999999 44 377887776
Q ss_pred hH-----HHHHHHHHhCCCccceEEEEeccCCCC
Q 025845 88 GG-----VTLALAADKFPHKISVAVFVTAFMPDT 116 (247)
Q Consensus 88 Gg-----~ia~~~a~~~p~~v~~lvl~~~~~~~~ 116 (247)
-+ .+++..+...|..=.++++++++....
T Consensus 179 P~vPvLAAisLM~~~~~p~~PssMtlmGgPIDaR 212 (415)
T COG4553 179 PTVPVLAAISLMEEDGDPNVPSSMTLMGGPIDAR 212 (415)
T ss_pred CCchHHHHHHHHHhcCCCCCCceeeeecCccccc
Confidence 54 344444556677778999999875543
No 235
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=90.78 E-value=0.4 Score=40.03 Aligned_cols=43 Identities=23% Similarity=0.224 Sum_probs=32.4
Q ss_pred CCCCcEEEEEEehhHHHHHHHHHh-----CCCccceEEEEeccCCCCC
Q 025845 75 PAEEKVILVGHSLGGVTLALAADK-----FPHKISVAVFVTAFMPDTT 117 (247)
Q Consensus 75 ~~~~~~~lvGhS~Gg~ia~~~a~~-----~p~~v~~lvl~~~~~~~~~ 117 (247)
.+.+|+.|||+|+|+-+...+... .-+.|..+++.+++.+...
T Consensus 444 qG~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~~k~ 491 (633)
T KOG2385|consen 444 QGNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVPTKA 491 (633)
T ss_pred cCCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCccCCH
Confidence 578999999999999987655542 2246889999998755443
No 236
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=90.72 E-value=0.66 Score=35.84 Aligned_cols=44 Identities=25% Similarity=0.520 Sum_probs=29.2
Q ss_pred HHHHHHHhCCCCCcEEEEEEehhHHHHHHHHHhCCCccceEEEEec
Q 025845 66 PLMEVLASLPAEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTA 111 (247)
Q Consensus 66 ~l~~~i~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~ 111 (247)
|+..-+..+....++.|-|||+||.+|..+..++. +-.+.+.+|
T Consensus 264 dI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg--lP~VaFesP 307 (425)
T COG5153 264 DILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFG--LPVVAFESP 307 (425)
T ss_pred HHHHHHHHhCCCceEEEeccccchHHHHHhccccC--CceEEecCc
Confidence 33333333336778999999999999999888774 333444333
No 237
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=90.72 E-value=0.66 Score=35.84 Aligned_cols=44 Identities=25% Similarity=0.520 Sum_probs=29.2
Q ss_pred HHHHHHHhCCCCCcEEEEEEehhHHHHHHHHHhCCCccceEEEEec
Q 025845 66 PLMEVLASLPAEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTA 111 (247)
Q Consensus 66 ~l~~~i~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~ 111 (247)
|+..-+..+....++.|-|||+||.+|..+..++. +-.+.+.+|
T Consensus 264 dI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg--lP~VaFesP 307 (425)
T KOG4540|consen 264 DILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFG--LPVVAFESP 307 (425)
T ss_pred HHHHHHHHhCCCceEEEeccccchHHHHHhccccC--CceEEecCc
Confidence 33333333336778999999999999999888774 333444333
No 238
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=90.32 E-value=0.4 Score=37.61 Aligned_cols=106 Identities=14% Similarity=0.107 Sum_probs=71.6
Q ss_pred CCCCcEEEEEcCCCCChhh----HHHHH-----------HHHHhCCcEEEEecCC-CCCCCCCcccC--ccCHHHhHHHH
Q 025845 6 GMEEKHFVLVHGVNHGAWC----WYKLK-----------ARLVAGGHRVTAVDLA-ASGINMKRIED--VHTFHAYSEPL 67 (247)
Q Consensus 6 ~~~~~~iv~lhG~~~~~~~----~~~~~-----------~~l~~~g~~vi~~D~~-G~G~S~~~~~~--~~~~~~~~~~l 67 (247)
....|..+.+.|..+.+.. |+.+- ..|.+ -.++.+|-| |.|.|--.... .-+..+.+.|+
T Consensus 28 ks~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWlk~--adllfvDnPVGaGfSyVdg~~~Y~~~~~qia~Dl 105 (414)
T KOG1283|consen 28 KSERPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWLKD--ADLLFVDNPVGAGFSYVDGSSAYTTNNKQIALDL 105 (414)
T ss_pred ccCCCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhhhh--ccEEEecCCCcCceeeecCcccccccHHHHHHHH
Confidence 3566777888888654432 43222 23332 467777765 88888544432 34788899999
Q ss_pred HHHHHhC------CCCCcEEEEEEehhHHHHHHHHHhCCC---------ccceEEEEeccC
Q 025845 68 MEVLASL------PAEEKVILVGHSLGGVTLALAADKFPH---------KISVAVFVTAFM 113 (247)
Q Consensus 68 ~~~i~~l------~~~~~~~lvGhS~Gg~ia~~~a~~~p~---------~v~~lvl~~~~~ 113 (247)
.++++.+ -+..+++++..|+||-+|..++...-+ ...+++|=+++.
T Consensus 106 ~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLGDSWI 166 (414)
T KOG1283|consen 106 VELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALGDSWI 166 (414)
T ss_pred HHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEccCccc
Confidence 9999876 145799999999999999888764322 245677766653
No 239
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=87.84 E-value=2.2 Score=35.72 Aligned_cols=105 Identities=9% Similarity=0.004 Sum_probs=62.9
Q ss_pred CCcEEEEEcCCCCChhhHHHHHH-----------HHHh------CCcEEEEecCC-CCCCCCCcccC--ccCHHHhHHHH
Q 025845 8 EEKHFVLVHGVNHGAWCWYKLKA-----------RLVA------GGHRVTAVDLA-ASGINMKRIED--VHTFHAYSEPL 67 (247)
Q Consensus 8 ~~~~iv~lhG~~~~~~~~~~~~~-----------~l~~------~g~~vi~~D~~-G~G~S~~~~~~--~~~~~~~~~~l 67 (247)
+.|.||.+.|.+|-+..--.+.+ .|.. +--.++-.|.| |-|.|-..... ..+-+..|+|.
T Consensus 72 ~dPlvLWLnGGPGCSSl~G~~~E~GPf~v~~~G~tL~~N~ySWnk~aNiLfLd~PvGvGFSYs~~~~~~~~~D~~~A~d~ 151 (454)
T KOG1282|consen 72 TDPLVLWLNGGPGCSSLGGLFEENGPFRVKYNGKTLYLNPYSWNKEANILFLDQPVGVGFSYSNTSSDYKTGDDGTAKDN 151 (454)
T ss_pred CCCEEEEeCCCCCccchhhhhhhcCCeEEcCCCCcceeCCccccccccEEEEecCCcCCccccCCCCcCcCCcHHHHHHH
Confidence 47899999999875544211111 0100 11368888887 77877644321 13555666777
Q ss_pred HHHHHhC------CCCCcEEEEEEehhHHH----HHHHHHhCC------CccceEEEEecc
Q 025845 68 MEVLASL------PAEEKVILVGHSLGGVT----LALAADKFP------HKISVAVFVTAF 112 (247)
Q Consensus 68 ~~~i~~l------~~~~~~~lvGhS~Gg~i----a~~~a~~~p------~~v~~lvl~~~~ 112 (247)
.+++... ...+++.+.|-|++|.. |..+..... -.++++++-++.
T Consensus 152 ~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNLkG~~IGNg~ 212 (454)
T KOG1282|consen 152 YEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINLKGYAIGNGL 212 (454)
T ss_pred HHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCcccceEEEecCcc
Confidence 6666543 25679999999999954 444443321 136777766664
No 240
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=87.69 E-value=5.6 Score=32.27 Aligned_cols=86 Identities=19% Similarity=0.201 Sum_probs=63.4
Q ss_pred cEEEEEcCCCC-------ChhhHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCCcEEE
Q 025845 10 KHFVLVHGVNH-------GAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVIL 82 (247)
Q Consensus 10 ~~iv~lhG~~~-------~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~l 82 (247)
..||++||=+. +.+.|..+++.+.+++ -+..+|+.-.|.- ..+++.+.-+..++... +-.+
T Consensus 172 ~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~-lip~~D~AYQGF~-------~GleeDa~~lR~~a~~~----~~~l 239 (396)
T COG1448 172 GSVVLLHGCCHNPTGIDPTEEQWQELADLIKERG-LIPFFDIAYQGFA-------DGLEEDAYALRLFAEVG----PELL 239 (396)
T ss_pred CCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcC-Ceeeeehhhhhhc-------cchHHHHHHHHHHHHhC----CcEE
Confidence 36999998764 4467999999998775 5667777655433 35788888888888766 2288
Q ss_pred EEEehhHHHHHHHHHhCCCccceEEEEecc
Q 025845 83 VGHSLGGVTLALAADKFPHKISVAVFVTAF 112 (247)
Q Consensus 83 vGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 112 (247)
|..|+.=..+ .|.+||-++++++..
T Consensus 240 va~S~SKnfg-----LYgERVGa~~vva~~ 264 (396)
T COG1448 240 VASSFSKNFG-----LYGERVGALSVVAED 264 (396)
T ss_pred EEehhhhhhh-----hhhhccceeEEEeCC
Confidence 8888765533 477899999998764
No 241
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=87.68 E-value=3.8 Score=27.70 Aligned_cols=59 Identities=14% Similarity=0.135 Sum_probs=36.4
Q ss_pred CCCCCcEEEEEcCCCCChhhH--HHHHHHHHhCCc---EEE----EecCCCCCCCCCcccCccCHHHhHHHHHHHHHh
Q 025845 5 VGMEEKHFVLVHGVNHGAWCW--YKLKARLVAGGH---RVT----AVDLAASGINMKRIEDVHTFHAYSEPLMEVLAS 73 (247)
Q Consensus 5 ~~~~~~~iv~lhG~~~~~~~~--~~~~~~l~~~g~---~vi----~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~ 73 (247)
.++++|-|+-+||+.|+...| +.+++.|-..|- .|. ..|+| ....++++-++|.+.|..
T Consensus 48 ~~p~KpLVlSfHG~tGtGKn~v~~liA~~ly~~G~~S~~V~~f~~~~hFP----------~~~~v~~Yk~~L~~~I~~ 115 (127)
T PF06309_consen 48 PNPRKPLVLSFHGWTGTGKNFVSRLIAEHLYKSGMKSPFVHQFIATHHFP----------HNSNVDEYKEQLKSWIRG 115 (127)
T ss_pred CCCCCCEEEEeecCCCCcHHHHHHHHHHHHHhcccCCCceeeecccccCC----------CchHHHHHHHHHHHHHHH
Confidence 367889999999999998876 466666543331 222 23333 123566666666665543
No 242
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=86.81 E-value=4.5 Score=29.90 Aligned_cols=65 Identities=20% Similarity=0.168 Sum_probs=46.6
Q ss_pred CCc-EEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCCcEEEEEEeh----hHHHHHHHHHhCC-CccceEEE
Q 025845 35 GGH-RVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSL----GGVTLALAADKFP-HKISVAVF 108 (247)
Q Consensus 35 ~g~-~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~lvGhS~----Gg~ia~~~a~~~p-~~v~~lvl 108 (247)
.|. +|+..|-++.. .++.+.+++.+.++++.. + -.++|+|+|. |..++-.+|.+.. ..+..++-
T Consensus 75 ~G~d~V~~~~~~~~~--------~~~~e~~a~al~~~i~~~-~-p~lVL~~~t~~~~~grdlaprlAarLga~lvsdv~~ 144 (202)
T cd01714 75 MGADRAILVSDRAFA--------GADTLATAKALAAAIKKI-G-VDLILTGKQSIDGDTGQVGPLLAELLGWPQITYVSK 144 (202)
T ss_pred cCCCEEEEEeccccc--------CCChHHHHHHHHHHHHHh-C-CCEEEEcCCcccCCcCcHHHHHHHHhCCCccceEEE
Confidence 454 67777655432 468899999999999887 5 6899999998 7788888877642 24555554
Q ss_pred E
Q 025845 109 V 109 (247)
Q Consensus 109 ~ 109 (247)
+
T Consensus 145 l 145 (202)
T cd01714 145 I 145 (202)
T ss_pred E
Confidence 4
No 243
>PRK11613 folP dihydropteroate synthase; Provisional
Probab=85.57 E-value=6.9 Score=30.64 Aligned_cols=59 Identities=20% Similarity=0.127 Sum_probs=33.0
Q ss_pred HHHHHHHHHhCCcE--EEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCCcEEEEEEehhHHHH
Q 025845 25 WYKLKARLVAGGHR--VTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGVTL 92 (247)
Q Consensus 25 ~~~~~~~l~~~g~~--vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~lvGhS~Gg~ia 92 (247)
+...++.+.+.|.. =|.+| ||+|.+.... .--+..+.+..+ ..+ ....++|+|-=.++.
T Consensus 165 l~~~i~~a~~~GI~~~~IilD-PGiGF~k~~~----~n~~ll~~l~~l-~~l---g~Pilvg~SRKsfig 225 (282)
T PRK11613 165 FIEQIARCEAAGIAKEKLLLD-PGFGFGKNLS----HNYQLLARLAEF-HHF---NLPLLVGMSRKSMIG 225 (282)
T ss_pred HHHHHHHHHHcCCChhhEEEe-CCCCcCCCHH----HHHHHHHHHHHH-HhC---CCCEEEEecccHHHH
Confidence 44555566667875 78889 5887654221 111122222222 233 478899999666554
No 244
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=85.04 E-value=12 Score=27.15 Aligned_cols=38 Identities=18% Similarity=0.182 Sum_probs=30.8
Q ss_pred CCCcEEEEEcCCCCChhh--HHHHHHHHHhCCcEEEEecC
Q 025845 7 MEEKHFVLVHGVNHGAWC--WYKLKARLVAGGHRVTAVDL 44 (247)
Q Consensus 7 ~~~~~iv~lhG~~~~~~~--~~~~~~~l~~~g~~vi~~D~ 44 (247)
+.++.+|++-|+.|+... -..+.+.|.++|++++..|=
T Consensus 20 ~~~~~viW~TGLSGsGKSTiA~ale~~L~~~G~~~y~LDG 59 (197)
T COG0529 20 GQKGAVIWFTGLSGSGKSTIANALEEKLFAKGYHVYLLDG 59 (197)
T ss_pred CCCCeEEEeecCCCCCHHHHHHHHHHHHHHcCCeEEEecC
Confidence 456789999999877554 46777888889999999984
No 245
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=83.67 E-value=1 Score=36.24 Aligned_cols=145 Identities=13% Similarity=0.028 Sum_probs=74.8
Q ss_pred HHHHhCCCCCcEEEEEEehhHHHHHHHHHhCCCccceEEEEeccCCCCCCChHHHHHHHHHhhcCCCCcccccccccccC
Q 025845 69 EVLASLPAEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDA 148 (247)
Q Consensus 69 ~~i~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (247)
+.+.++ .++.+.+-|-|--|..++.-|...| +|..+| ++.-..... +..+..+.+..++.+..-+ ..++..
T Consensus 226 ~eL~q~-~Ik~F~VTGaSKRgWttwLTAIaDp-rv~aIv---p~v~D~Lni-~a~L~hiyrsYGgnwpi~l---~pyyae 296 (507)
T COG4287 226 DELEQV-EIKGFMVTGASKRGWTTWLTAIADP-RVFAIV---PFVYDNLNI-EAQLLHIYRSYGGNWPIKL---APYYAE 296 (507)
T ss_pred hhhhhe-eeeeEEEeccccchHHHHHHHhcCc-chhhhh---hhHHhhccc-HHHHHHHHHhhCCCCCccc---chhHhh
Confidence 455566 7889999999999999988888776 577766 221111222 2244444444322222221 111111
Q ss_pred CCCcccceeechhhHHHHHhcCCCcchhhhhhhhhcccchhHHhhhhhhccchhHHHHHHHHHHHhhcCCcc-eeeecCC
Q 025845 149 SNPSHISMLFGREFLTIKIYQLCPPEVINLLRITFIGRAIVLRQIVSYLYLDSDTMQIMLNFIIIIIITTHM-SELINCS 227 (247)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~D~~~p~~~~~~~~~~~~~~~~-~~~i~~~ 227 (247)
+- ...+....++....- .+... ........+..++.-+.++..|...++..+.... +.+|+.+ +.++|+.
T Consensus 297 gi----~erl~tp~fkqL~~I---iDPla-y~~try~~RLalpKyivnaSgDdff~pDsa~lYy-d~LPG~kaLrmvPN~ 367 (507)
T COG4287 297 GI----DERLETPLFKQLLEI---IDPLA-YRNTRYQLRLALPKYIVNASGDDFFVPDSANLYY-DDLPGEKALRMVPND 367 (507)
T ss_pred hH----HHhhcCHHHHHHHHh---hcHHH-HhhhhhhhhccccceeecccCCcccCCCccceee-ccCCCceeeeeCCCC
Confidence 10 111111111111100 00011 1111222334445556667777777777777666 8888865 8899999
Q ss_pred Cccc
Q 025845 228 RRAF 231 (247)
Q Consensus 228 gH~~ 231 (247)
.|..
T Consensus 368 ~H~~ 371 (507)
T COG4287 368 PHNL 371 (507)
T ss_pred cchh
Confidence 9973
No 246
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins []. These proteins include Escherichia coli and Bacillus subtilis ffh protein (P48), which seems to be the prokaryotic counterpart of SRP54; signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures, in conjunction with SRP, the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; bacterial FtsY protein, which is believed to play a similar role to that of the docking protein in eukaryotes; the pilA protein from Neisseria gonorrhoeae, the homologue of ftsY; and bacterial flagellar biosynthesis protein flhF.; GO: 0005525 GTP binding, 0006614 SRP-dependent cotranslational protein targeting to membrane; PDB: 2OG2_A 3B9Q_A 3DM9_B 3DMD_B 3E70_C 3DM5_B 2XXA_C 2J28_9 1ZU5_B 1ZU4_A ....
Probab=83.63 E-value=11 Score=27.82 Aligned_cols=75 Identities=19% Similarity=0.110 Sum_probs=50.0
Q ss_pred HHHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCCcEEEEEEehhHHHHHHHHHhCC--Cc
Q 025845 25 WYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGVTLALAADKFP--HK 102 (247)
Q Consensus 25 ~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p--~~ 102 (247)
.....+.+.++++.+|.+|-+|.. ..-.+..+++.++++.. ...+++||=-+..+.-.+..+.++- -.
T Consensus 72 ~~~~l~~~~~~~~D~vlIDT~Gr~---------~~d~~~~~el~~~~~~~-~~~~~~LVlsa~~~~~~~~~~~~~~~~~~ 141 (196)
T PF00448_consen 72 AREALEKFRKKGYDLVLIDTAGRS---------PRDEELLEELKKLLEAL-NPDEVHLVLSATMGQEDLEQALAFYEAFG 141 (196)
T ss_dssp HHHHHHHHHHTTSSEEEEEE-SSS---------STHHHHHHHHHHHHHHH-SSSEEEEEEEGGGGGHHHHHHHHHHHHSS
T ss_pred HHHHHHHHhhcCCCEEEEecCCcc---------hhhHHHHHHHHHHhhhc-CCccceEEEecccChHHHHHHHHHhhccc
Confidence 334445566678999999999874 34466777788888877 6667787776666666555444332 24
Q ss_pred cceEEEE
Q 025845 103 ISVAVFV 109 (247)
Q Consensus 103 v~~lvl~ 109 (247)
+.++|+.
T Consensus 142 ~~~lIlT 148 (196)
T PF00448_consen 142 IDGLILT 148 (196)
T ss_dssp TCEEEEE
T ss_pred CceEEEE
Confidence 7888874
No 247
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=82.08 E-value=3.1 Score=35.75 Aligned_cols=103 Identities=18% Similarity=0.167 Sum_probs=52.6
Q ss_pred CCcEEEEEcCCCC---ChhhHHHHHHHHH-hCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhC-CCCCcEEE
Q 025845 8 EEKHFVLVHGVNH---GAWCWYKLKARLV-AGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASL-PAEEKVIL 82 (247)
Q Consensus 8 ~~~~iv~lhG~~~---~~~~~~~~~~~l~-~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l-~~~~~~~l 82 (247)
++-.||=+||.|- ++..-++....++ +.|..|+.+|+.=.=..+-|..-..-+-.++..+.. -..+ .-.+++++
T Consensus 395 S~sli~HcHGGGfVAqsSkSHE~YLr~Wa~aL~cPiiSVdYSLAPEaPFPRaleEv~fAYcW~inn-~allG~TgEriv~ 473 (880)
T KOG4388|consen 395 SRSLIVHCHGGGFVAQSSKSHEPYLRSWAQALGCPIISVDYSLAPEAPFPRALEEVFFAYCWAINN-CALLGSTGERIVL 473 (880)
T ss_pred CceEEEEecCCceeeeccccccHHHHHHHHHhCCCeEEeeeccCCCCCCCcHHHHHHHHHHHHhcC-HHHhCcccceEEE
Confidence 3446788999873 2222223232222 247899999975322222111100111222222221 1112 13589999
Q ss_pred EEEehhHHHHHHHHHh---CCCcc-ceEEEEec
Q 025845 83 VGHSLGGVTLALAADK---FPHKI-SVAVFVTA 111 (247)
Q Consensus 83 vGhS~Gg~ia~~~a~~---~p~~v-~~lvl~~~ 111 (247)
+|-|-||.+++..|.+ +.-|| +++++.=+
T Consensus 474 aGDSAGgNL~~~VaLr~i~~gvRvPDGl~laY~ 506 (880)
T KOG4388|consen 474 AGDSAGGNLCFTVALRAIAYGVRVPDGLMLAYP 506 (880)
T ss_pred eccCCCcceeehhHHHHHHhCCCCCCceEEecC
Confidence 9999999876665543 33344 56776544
No 248
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=80.91 E-value=2.2 Score=33.53 Aligned_cols=29 Identities=31% Similarity=0.389 Sum_probs=23.6
Q ss_pred HHHHHhCCCCCcEEEEEEehhHHHHHHHHH
Q 025845 68 MEVLASLPAEEKVILVGHSLGGVTLALAAD 97 (247)
Q Consensus 68 ~~~i~~l~~~~~~~lvGhS~Gg~ia~~~a~ 97 (247)
.+++..+ +.++-.++|||+|-+.|+.++.
T Consensus 73 ~~~l~~~-Gi~p~~~~GhSlGE~aA~~~ag 101 (298)
T smart00827 73 ARLWRSW-GVRPDAVVGHSLGEIAAAYVAG 101 (298)
T ss_pred HHHHHHc-CCcccEEEecCHHHHHHHHHhC
Confidence 3556677 7889999999999999887764
No 249
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=78.79 E-value=3.6 Score=32.65 Aligned_cols=63 Identities=19% Similarity=0.160 Sum_probs=39.6
Q ss_pred hhHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCCcEEEEEEehhHHHHHHHHHhC
Q 025845 23 WCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGVTLALAADKF 99 (247)
Q Consensus 23 ~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~lvGhS~Gg~ia~~~a~~~ 99 (247)
..|.+++..|.... +..=+-|-| .---..--+.+.++.. ++..-.++|.|+|+.++..+|..+
T Consensus 2 ~d~~rl~r~l~~~~---~gLvL~GGG----------~RG~ahiGvL~aLee~-gi~~d~v~GtSaGAi~ga~ya~g~ 64 (306)
T cd07225 2 SDFSRLARVLTGNS---IALVLGGGG----------ARGCAHIGVIKALEEA-GIPVDMVGGTSIGAFIGALYAEER 64 (306)
T ss_pred ChHHHHHHHhcCCC---EEEEECChH----------HHHHHHHHHHHHHHHc-CCCCCEEEEECHHHHHHHHHHcCC
Confidence 45778888887432 222222322 1122333445555666 777888999999999999998764
No 250
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=78.65 E-value=1.4 Score=35.04 Aligned_cols=30 Identities=33% Similarity=0.428 Sum_probs=24.2
Q ss_pred HHHHHHhCCCCCcEEEEEEehhHHHHHHHHH
Q 025845 67 LMEVLASLPAEEKVILVGHSLGGVTLALAAD 97 (247)
Q Consensus 67 l~~~i~~l~~~~~~~lvGhS~Gg~ia~~~a~ 97 (247)
+.++++.. +.++-.++|||+|=+.|+.++.
T Consensus 74 l~~~l~~~-Gi~P~~v~GhSlGE~aA~~aaG 103 (318)
T PF00698_consen 74 LARLLRSW-GIKPDAVIGHSLGEYAALVAAG 103 (318)
T ss_dssp HHHHHHHT-THCESEEEESTTHHHHHHHHTT
T ss_pred hhhhhccc-ccccceeeccchhhHHHHHHCC
Confidence 34566777 8899999999999988887653
No 251
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=78.50 E-value=3 Score=32.77 Aligned_cols=29 Identities=24% Similarity=0.288 Sum_probs=23.2
Q ss_pred HHHHHhCCCCCcEEEEEEehhHHHHHHHHH
Q 025845 68 MEVLASLPAEEKVILVGHSLGGVTLALAAD 97 (247)
Q Consensus 68 ~~~i~~l~~~~~~~lvGhS~Gg~ia~~~a~ 97 (247)
.+++... +.++..++|||+|=+.|+.++.
T Consensus 67 ~~~l~~~-g~~P~~v~GhS~GE~aAa~~aG 95 (295)
T TIGR03131 67 WRALLAL-LPRPSAVAGYSVGEYAAAVVAG 95 (295)
T ss_pred HHHHHhc-CCCCcEEeecCHHHHHHHHHhC
Confidence 3556667 7789999999999988887664
No 252
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=78.12 E-value=25 Score=27.47 Aligned_cols=89 Identities=15% Similarity=0.126 Sum_probs=50.9
Q ss_pred cEEEEEcCCCCChhh------HHHHHHHH-HhCCcEEEEecCCCCCCC--------CCcc----c--CccCHHHhHHHHH
Q 025845 10 KHFVLVHGVNHGAWC------WYKLKARL-VAGGHRVTAVDLAASGIN--------MKRI----E--DVHTFHAYSEPLM 68 (247)
Q Consensus 10 ~~iv~lhG~~~~~~~------~~~~~~~l-~~~g~~vi~~D~~G~G~S--------~~~~----~--~~~~~~~~~~~l~ 68 (247)
..|||+=|.+.+... -.++.+.+ ...+-..+++=.+|-|.. .... . ....+++-+.+..
T Consensus 2 ~iv~~fDGT~n~~~~~~~~TNV~rL~~~~~~~~~~~q~~~Y~~GvGt~~~~~~~~~~~~~~~~~~~a~g~g~~~~I~~ay 81 (277)
T PF09994_consen 2 RIVVFFDGTGNNPDNDPPPTNVARLYDAYKDRDGERQIVYYIPGVGTEFGSEFGESGRALDRLLGGAFGWGIEARIRDAY 81 (277)
T ss_pred cEEEEecCCCCCCCCCccccHHHHHHHHhhccCCCceeEEEecccccccccccccccchhhhccCchhhcchHHHHHHHH
Confidence 457888888654332 23344444 222234455555777761 1100 0 1134455444444
Q ss_pred H-HHHhCCCCCcEEEEEEehhHHHHHHHHHh
Q 025845 69 E-VLASLPAEEKVILVGHSLGGVTLALAADK 98 (247)
Q Consensus 69 ~-~i~~l~~~~~~~lvGhS~Gg~ia~~~a~~ 98 (247)
. +.+.....+++.++|+|-|+..|-.+|..
T Consensus 82 ~~l~~~~~~gd~I~lfGFSRGA~~AR~~a~~ 112 (277)
T PF09994_consen 82 RFLSKNYEPGDRIYLFGFSRGAYTARAFANM 112 (277)
T ss_pred HHHHhccCCcceEEEEecCccHHHHHHHHHH
Confidence 3 43555566789999999999999999864
No 253
>TIGR01425 SRP54_euk signal recognition particle protein SRP54. This model represents examples from the eukaryotic cytosol of the signal recognition particle protein component, SRP54. This GTP-binding protein is a component of the eukaryotic signal recognition particle, along with several other protein subunits and a 7S RNA. Some species, including Arabidopsis, have several closely related forms. The extreme C-terminal region is glycine-rich and lower in complexity, poorly conserved between species, and excluded from this model.
Probab=77.81 E-value=37 Score=28.52 Aligned_cols=71 Identities=13% Similarity=0.218 Sum_probs=49.1
Q ss_pred HHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCCcEEEEEEehhHHHHHHHHHhCCC--ccceE
Q 025845 29 KARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGVTLALAADKFPH--KISVA 106 (247)
Q Consensus 29 ~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~--~v~~l 106 (247)
...+.+.+|.++.+|-+|.- ..-+.+.+.+..+.+.. ....++||--++-|.-+...|..+.+ .+.++
T Consensus 175 l~~~~~~~~DvViIDTaGr~---------~~d~~lm~El~~i~~~~-~p~e~lLVlda~~Gq~a~~~a~~F~~~~~~~g~ 244 (429)
T TIGR01425 175 VEKFKKENFDIIIVDTSGRH---------KQEDSLFEEMLQVAEAI-QPDNIIFVMDGSIGQAAEAQAKAFKDSVDVGSV 244 (429)
T ss_pred HHHHHhCCCCEEEEECCCCC---------cchHHHHHHHHHHhhhc-CCcEEEEEeccccChhHHHHHHHHHhccCCcEE
Confidence 34455468999999999863 23345667777777666 66788888888877777766666543 36777
Q ss_pred EEE
Q 025845 107 VFV 109 (247)
Q Consensus 107 vl~ 109 (247)
|+.
T Consensus 245 IlT 247 (429)
T TIGR01425 245 IIT 247 (429)
T ss_pred EEE
Confidence 764
No 254
>COG0218 Predicted GTPase [General function prediction only]
Probab=77.30 E-value=4.4 Score=29.75 Aligned_cols=67 Identities=18% Similarity=0.147 Sum_probs=37.7
Q ss_pred CCCCCcEEEEEcCCCCChhhH-HHHHH--HHHh----CC-----------cEEEEecCCCCCCCCCcccCccCHHHhHHH
Q 025845 5 VGMEEKHFVLVHGVNHGAWCW-YKLKA--RLVA----GG-----------HRVTAVDLAASGINMKRIEDVHTFHAYSEP 66 (247)
Q Consensus 5 ~~~~~~~iv~lhG~~~~~~~~-~~~~~--~l~~----~g-----------~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 66 (247)
.....|-|+|+...--..+.. +.+.. .|+. .| -....+|+||+|....+.. --+.|.+.
T Consensus 20 P~~~~~EIaF~GRSNVGKSSlIN~l~~~k~LArtSktPGrTq~iNff~~~~~~~lVDlPGYGyAkv~k~---~~e~w~~~ 96 (200)
T COG0218 20 PEDDLPEIAFAGRSNVGKSSLINALTNQKNLARTSKTPGRTQLINFFEVDDELRLVDLPGYGYAKVPKE---VKEKWKKL 96 (200)
T ss_pred CCCCCcEEEEEccCcccHHHHHHHHhCCcceeecCCCCCccceeEEEEecCcEEEEeCCCcccccCCHH---HHHHHHHH
Confidence 345667788887765444443 22222 1221 11 1277899999999987662 34455555
Q ss_pred HHHHHHhC
Q 025845 67 LMEVLASL 74 (247)
Q Consensus 67 l~~~i~~l 74 (247)
+.+.|+.-
T Consensus 97 i~~YL~~R 104 (200)
T COG0218 97 IEEYLEKR 104 (200)
T ss_pred HHHHHhhc
Confidence 55555543
No 255
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=77.02 E-value=10 Score=31.95 Aligned_cols=91 Identities=20% Similarity=0.116 Sum_probs=58.0
Q ss_pred CCCCCCcEEEEEcCCCCChhhHH--HHHHHHHhCCcE-EEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCC-CCCc
Q 025845 4 VVGMEEKHFVLVHGVNHGAWCWY--KLKARLVAGGHR-VTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLP-AEEK 79 (247)
Q Consensus 4 ~~~~~~~~iv~lhG~~~~~~~~~--~~~~~l~~~g~~-vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~-~~~~ 79 (247)
.|+.+.|-.|.+-|+-. ++-|+ .....| |.. .+.-|.|=-|.+=-...+.+ -+...+-+.+-++.|+ ..+.
T Consensus 284 PGD~KPPL~VYFSGyR~-aEGFEgy~MMk~L---g~PfLL~~DpRleGGaFYlGs~ey-E~~I~~~I~~~L~~LgF~~~q 358 (511)
T TIGR03712 284 PGDFKPPLNVYFSGYRP-AEGFEGYFMMKRL---GAPFLLIGDPRLEGGAFYLGSDEY-EQGIINVIQEKLDYLGFDHDQ 358 (511)
T ss_pred CcCCCCCeEEeeccCcc-cCcchhHHHHHhc---CCCeEEeeccccccceeeeCcHHH-HHHHHHHHHHHHHHhCCCHHH
Confidence 45666777799999854 33343 222333 333 44567776665532222212 3445666667788882 3468
Q ss_pred EEEEEEehhHHHHHHHHHhC
Q 025845 80 VILVGHSLGGVTLALAADKF 99 (247)
Q Consensus 80 ~~lvGhS~Gg~ia~~~a~~~ 99 (247)
++|-|.|||..-|+.++++.
T Consensus 359 LILSGlSMGTfgAlYYga~l 378 (511)
T TIGR03712 359 LILSGLSMGTFGALYYGAKL 378 (511)
T ss_pred eeeccccccchhhhhhcccC
Confidence 99999999999999999864
No 256
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=76.68 E-value=21 Score=29.76 Aligned_cols=72 Identities=19% Similarity=0.221 Sum_probs=53.0
Q ss_pred HHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCCcEEEEEEehhHHHHHHHHHhCCCc--cceE
Q 025845 29 KARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGVTLALAADKFPHK--ISVA 106 (247)
Q Consensus 29 ~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~--v~~l 106 (247)
.+.+.+.+|.|+.+|-.|.- .--+++-+++.++-+.+ ....+.+|--||=|.-|...|..+.++ +.++
T Consensus 175 l~~ak~~~~DvvIvDTAGRl---------~ide~Lm~El~~Ik~~~-~P~E~llVvDam~GQdA~~~A~aF~e~l~itGv 244 (451)
T COG0541 175 LEKAKEEGYDVVIVDTAGRL---------HIDEELMDELKEIKEVI-NPDETLLVVDAMIGQDAVNTAKAFNEALGITGV 244 (451)
T ss_pred HHHHHHcCCCEEEEeCCCcc---------cccHHHHHHHHHHHhhc-CCCeEEEEEecccchHHHHHHHHHhhhcCCceE
Confidence 34444455667777766541 23456778888888888 889999999999999999999988765 6788
Q ss_pred EEEe
Q 025845 107 VFVT 110 (247)
Q Consensus 107 vl~~ 110 (247)
|+.=
T Consensus 245 IlTK 248 (451)
T COG0541 245 ILTK 248 (451)
T ss_pred EEEc
Confidence 8753
No 257
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=76.03 E-value=5.2 Score=28.60 Aligned_cols=33 Identities=24% Similarity=0.227 Sum_probs=24.7
Q ss_pred HHHHHHhCCCCCcEEEEEEehhHHHHHHHHHhCC
Q 025845 67 LMEVLASLPAEEKVILVGHSLGGVTLALAADKFP 100 (247)
Q Consensus 67 l~~~i~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p 100 (247)
+.+.+... +...-.++|-|.|+.++..++...+
T Consensus 16 vl~aL~e~-gi~~d~v~GtSaGAi~aa~~a~g~~ 48 (172)
T cd07198 16 VAKALRER-GPLIDIIAGTSAGAIVAALLASGRD 48 (172)
T ss_pred HHHHHHHc-CCCCCEEEEECHHHHHHHHHHcCCC
Confidence 33444444 5668889999999999999997653
No 258
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=76.02 E-value=3.5 Score=32.20 Aligned_cols=29 Identities=28% Similarity=0.253 Sum_probs=22.8
Q ss_pred HHHHhCCC-CCcEEEEEEehhHHHHHHHHHh
Q 025845 69 EVLASLPA-EEKVILVGHSLGGVTLALAADK 98 (247)
Q Consensus 69 ~~i~~l~~-~~~~~lvGhS~Gg~ia~~~a~~ 98 (247)
+++.+. + .++..++|||+|=+.|+.++..
T Consensus 74 ~~l~~~-g~i~p~~v~GhS~GE~aAa~~aG~ 103 (290)
T TIGR00128 74 LKLKEQ-GGLKPDFAAGHSLGEYSALVAAGA 103 (290)
T ss_pred HHHHHc-CCCCCCEEeecCHHHHHHHHHhCC
Confidence 445566 5 8899999999999988887643
No 259
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=75.93 E-value=5.2 Score=29.16 Aligned_cols=31 Identities=29% Similarity=0.319 Sum_probs=23.5
Q ss_pred HHHHHhCCCCCcEEEEEEehhHHHHHHHHHhC
Q 025845 68 MEVLASLPAEEKVILVGHSLGGVTLALAADKF 99 (247)
Q Consensus 68 ~~~i~~l~~~~~~~lvGhS~Gg~ia~~~a~~~ 99 (247)
.+.++.. +...-.++|-|.||.+|..++..+
T Consensus 18 l~~L~e~-~~~~d~i~GtSaGai~aa~~a~g~ 48 (194)
T cd07207 18 LKALEEA-GILKKRVAGTSAGAITAALLALGY 48 (194)
T ss_pred HHHHHHc-CCCcceEEEECHHHHHHHHHHcCC
Confidence 3334444 566788999999999999999754
No 260
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=75.67 E-value=38 Score=28.08 Aligned_cols=94 Identities=14% Similarity=0.103 Sum_probs=54.0
Q ss_pred cEEEEEcCCCC---ChhhHHHHHHHHHhCCcEEEEecCCCC---CCCCCcccCccCHHHhHHHHHHHHHh---CCCCCcE
Q 025845 10 KHFVLVHGVNH---GAWCWYKLKARLVAGGHRVTAVDLAAS---GINMKRIEDVHTFHAYSEPLMEVLAS---LPAEEKV 80 (247)
Q Consensus 10 ~~iv~lhG~~~---~~~~~~~~~~~l~~~g~~vi~~D~~G~---G~S~~~~~~~~~~~~~~~~l~~~i~~---l~~~~~~ 80 (247)
.|+|+++-... ...........|.+.|+.|+-+. +|+ |...... ..++++..+.+...+.. + ..+++
T Consensus 113 ~plviaPamn~~m~~~p~~~~Nl~~L~~~G~~vv~P~-~g~~ac~~~g~g~--~~~~~~i~~~v~~~~~~~~~~-~~~~v 188 (390)
T TIGR00521 113 APIILAPAMNENMYNNPAVQENIKRLKDDGYIFIEPD-SGLLACGDEGKGR--LAEPETIVKAAEREFSPKEDL-EGKRV 188 (390)
T ss_pred CCEEEEeCCChhhcCCHHHHHHHHHHHHCCcEEECCC-CcccccccccCCC--CCCHHHHHHHHHHHHhhcccc-CCceE
Confidence 57777776432 22234566677887777766554 332 3322221 34778888888877754 5 44566
Q ss_pred EEEEE------------------ehhHHHHHHHHHhCCCccceEEEEec
Q 025845 81 ILVGH------------------SLGGVTLALAADKFPHKISVAVFVTA 111 (247)
Q Consensus 81 ~lvGh------------------S~Gg~ia~~~a~~~p~~v~~lvl~~~ 111 (247)
.+-|- .||..+|..++.+ =..++++..
T Consensus 189 lit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~----Ga~V~~~~g 233 (390)
T TIGR00521 189 LITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKR----GADVTLITG 233 (390)
T ss_pred EEecCCccCCCCceeeecCCCcchHHHHHHHHHHHC----CCEEEEeCC
Confidence 65554 3566677666653 234555554
No 261
>COG3933 Transcriptional antiterminator [Transcription]
Probab=75.35 E-value=35 Score=28.58 Aligned_cols=89 Identities=20% Similarity=0.192 Sum_probs=62.5
Q ss_pred cEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCCcEEEEEEehhH
Q 025845 10 KHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGG 89 (247)
Q Consensus 10 ~~iv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~lvGhS~Gg 89 (247)
..||..||. +++...-.++..|.+. --+.++|+|= ..++.+..+.+.+-+++. +..+=.++=-.||.
T Consensus 110 ~vIiiAHG~-sTASSmaevanrLL~~-~~~~aiDMPL----------dvsp~~vle~l~e~~k~~-~~~~GlllLVDMGS 176 (470)
T COG3933 110 KVIIIAHGY-STASSMAEVANRLLGE-EIFIAIDMPL----------DVSPSDVLEKLKEYLKER-DYRSGLLLLVDMGS 176 (470)
T ss_pred eEEEEecCc-chHHHHHHHHHHHhhc-cceeeecCCC----------cCCHHHHHHHHHHHHHhc-CccCceEEEEecch
Confidence 478999995 5566677778888754 4799999992 268999999999999998 66665666668998
Q ss_pred HHHHH--HHHhCCCccceEEEEec
Q 025845 90 VTLAL--AADKFPHKISVAVFVTA 111 (247)
Q Consensus 90 ~ia~~--~a~~~p~~v~~lvl~~~ 111 (247)
..+.. +.....-.|+-+-.+++
T Consensus 177 L~~f~~~i~~~~~ipv~~i~nVST 200 (470)
T COG3933 177 LTSFGSIISEEFGIPVKVIPNVST 200 (470)
T ss_pred HHHHHHHHHHHhCCceEEEecccH
Confidence 75543 33344334554444444
No 262
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=75.23 E-value=46 Score=27.59 Aligned_cols=99 Identities=15% Similarity=0.136 Sum_probs=64.4
Q ss_pred EEEEEcCCCCChhhHHHHHHHHHhCCcEEEEecCCCCCCCCCccc----------------------CccCHHHhHHHHH
Q 025845 11 HFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIE----------------------DVHTFHAYSEPLM 68 (247)
Q Consensus 11 ~iv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~----------------------~~~~~~~~~~~l~ 68 (247)
+|+++--+-.-...+.-+.+.+.+.|.+|+.+|.-=.|....+.+ ....++.+++-+.
T Consensus 3 tI~iigT~DTK~~E~~yl~~~i~~~G~~v~~iDvg~~~~~~~~~di~~~eVa~~~g~~~~~~~~~~dRg~ai~~M~~ga~ 82 (403)
T PF06792_consen 3 TIAIIGTLDTKGEELLYLRDQIEAQGVEVLLIDVGTLGEPSFPPDISREEVARAAGDSIEAVRSSGDRGEAIEAMARGAA 82 (403)
T ss_pred EEEEEEccCCCHHHHHHHHHHHHHCCCcEEEEEcCCCCCCCCCCCcCHHHHHHhcCCChHHhhccCCHHHHHHHHHHHHH
Confidence 444443333334457777888888999999999754443322210 0123445566666
Q ss_pred HHHHhCC---CCCcEEEEEEehhHHHHHHHHHhCCCccceEEEE
Q 025845 69 EVLASLP---AEEKVILVGHSLGGVTLALAADKFPHKISVAVFV 109 (247)
Q Consensus 69 ~~i~~l~---~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~ 109 (247)
.++..+. .+.-++-+|=|.|..++.......|=-+-|++..
T Consensus 83 ~~v~~l~~~g~i~Gvi~~GGs~GT~lat~aMr~LPiG~PKlmVS 126 (403)
T PF06792_consen 83 RFVSDLYDEGKIDGVIGIGGSGGTALATAAMRALPIGFPKLMVS 126 (403)
T ss_pred HHHHHHHhcCCccEEEEecCCccHHHHHHHHHhCCCCCCeEEEE
Confidence 6666662 4577788899999999999998888666666643
No 263
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=75.02 E-value=5.5 Score=30.96 Aligned_cols=32 Identities=19% Similarity=0.197 Sum_probs=25.2
Q ss_pred HHHHHHhCCCCCcEEEEEEehhHHHHHHHHHhC
Q 025845 67 LMEVLASLPAEEKVILVGHSLGGVTLALAADKF 99 (247)
Q Consensus 67 l~~~i~~l~~~~~~~lvGhS~Gg~ia~~~a~~~ 99 (247)
+.+.++.. ++..-.++|.|+|+.++..+|...
T Consensus 28 VL~aLeE~-gi~~d~v~GtSaGAiiga~ya~g~ 59 (269)
T cd07227 28 ILQALEEA-GIPIDAIGGTSIGSFVGGLYAREA 59 (269)
T ss_pred HHHHHHHc-CCCccEEEEECHHHHHHHHHHcCC
Confidence 44455666 677788999999999999999764
No 264
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=74.19 E-value=35 Score=28.39 Aligned_cols=73 Identities=12% Similarity=0.069 Sum_probs=42.0
Q ss_pred CcEEEEEcCCCC---ChhhHHHHHHHHHhCCcEEEEecCCCC---CCCCCcccCccCHHHhHHHHHHHHHh--CCCCCcE
Q 025845 9 EKHFVLVHGVNH---GAWCWYKLKARLVAGGHRVTAVDLAAS---GINMKRIEDVHTFHAYSEPLMEVLAS--LPAEEKV 80 (247)
Q Consensus 9 ~~~iv~lhG~~~---~~~~~~~~~~~l~~~g~~vi~~D~~G~---G~S~~~~~~~~~~~~~~~~l~~~i~~--l~~~~~~ 80 (247)
+.|+|+++-... ...........|.+.|+.|+-+. +|+ |...... .-++++..+.+...+.. + ..+++
T Consensus 116 ~~pvvi~Pamn~~m~~~p~~~~Nl~~L~~~G~~ii~P~-~g~la~~~~g~gr--~~~~~~I~~~~~~~~~~~~l-~gk~v 191 (399)
T PRK05579 116 TAPVLVAPAMNTQMWENPATQRNLATLRSRGVEIIGPA-SGRLACGDVGPGR--MAEPEEIVAAAERALSPKDL-AGKRV 191 (399)
T ss_pred CCCEEEEeCCChhHcCCHHHHHHHHHHHHCCCEEECCC-CccccCCCcCCCC--CCCHHHHHHHHHHHhhhccc-CCCEE
Confidence 457778875422 22224566677887888888554 443 3222211 24777777777776643 4 44566
Q ss_pred EEEEE
Q 025845 81 ILVGH 85 (247)
Q Consensus 81 ~lvGh 85 (247)
.+-|-
T Consensus 192 lITgG 196 (399)
T PRK05579 192 LITAG 196 (399)
T ss_pred EEeCC
Confidence 66665
No 265
>PRK10279 hypothetical protein; Provisional
Probab=74.17 E-value=5.6 Score=31.50 Aligned_cols=33 Identities=24% Similarity=0.214 Sum_probs=25.6
Q ss_pred HHHHHHhCCCCCcEEEEEEehhHHHHHHHHHhCC
Q 025845 67 LMEVLASLPAEEKVILVGHSLGGVTLALAADKFP 100 (247)
Q Consensus 67 l~~~i~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p 100 (247)
+.+.++.. ++..-.++|.|+|+.++..||....
T Consensus 23 VL~aL~E~-gi~~d~i~GtS~GAlvga~yA~g~~ 55 (300)
T PRK10279 23 VINALKKV-GIEIDIVAGCSIGSLVGAAYACDRL 55 (300)
T ss_pred HHHHHHHc-CCCcCEEEEEcHHHHHHHHHHcCCh
Confidence 34445556 7788899999999999999987543
No 266
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=74.03 E-value=2.7 Score=35.55 Aligned_cols=29 Identities=0% Similarity=-0.069 Sum_probs=25.1
Q ss_pred CcceeeecCCCccccccChhhHHHHHHhh
Q 025845 218 THMSELINCSRRAFFLYHNTLFIQFVYVL 246 (247)
Q Consensus 218 ~~~~~~i~~~gH~~~~e~p~~~~~~v~~~ 246 (247)
+..++.+.+|||....++|+...+.+..+
T Consensus 427 ~l~~~~V~~AGH~vp~d~P~~~~~~i~~f 455 (462)
T PTZ00472 427 GFSFVQVYNAGHMVPMDQPAVALTMINRF 455 (462)
T ss_pred CeEEEEECCCCccChhhHHHHHHHHHHHH
Confidence 56678889999999999999999988764
No 267
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=73.95 E-value=14 Score=27.24 Aligned_cols=63 Identities=14% Similarity=0.216 Sum_probs=38.0
Q ss_pred CCcEEEEEcCCCCC---hhhHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHh
Q 025845 8 EEKHFVLVHGVNHG---AWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLAS 73 (247)
Q Consensus 8 ~~~~iv~lhG~~~~---~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~ 73 (247)
..+|++++||.... ...-..+...|.+.|..+...-+||.|..-... ....++.+.+.+++++
T Consensus 143 ~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~---~~~~~~~~~~~~f~~~ 208 (213)
T PF00326_consen 143 IKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGNP---ENRRDWYERILDFFDK 208 (213)
T ss_dssp GGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTSH---HHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCCc---hhHHHHHHHHHHHHHH
Confidence 57899999998643 344567777888777766666666544422111 1233556666666654
No 268
>PRK14974 cell division protein FtsY; Provisional
Probab=73.72 E-value=41 Score=27.21 Aligned_cols=69 Identities=23% Similarity=0.250 Sum_probs=47.6
Q ss_pred HhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCCcEEEEEEehhHHHHHHHHHhCC--CccceEEEEe
Q 025845 33 VAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGVTLALAADKFP--HKISVAVFVT 110 (247)
Q Consensus 33 ~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p--~~v~~lvl~~ 110 (247)
...++.++.+|-+|... +-..+.+.+..+.... ....++||.-+.-|.-+..-+..+. -.+.++|+.-
T Consensus 219 ~~~~~DvVLIDTaGr~~---------~~~~lm~eL~~i~~~~-~pd~~iLVl~a~~g~d~~~~a~~f~~~~~~~giIlTK 288 (336)
T PRK14974 219 KARGIDVVLIDTAGRMH---------TDANLMDELKKIVRVT-KPDLVIFVGDALAGNDAVEQAREFNEAVGIDGVILTK 288 (336)
T ss_pred HhCCCCEEEEECCCccC---------CcHHHHHHHHHHHHhh-CCceEEEeeccccchhHHHHHHHHHhcCCCCEEEEee
Confidence 33678999999997742 3345566677777766 5677788887777776666666543 2578888754
Q ss_pred c
Q 025845 111 A 111 (247)
Q Consensus 111 ~ 111 (247)
-
T Consensus 289 l 289 (336)
T PRK14974 289 V 289 (336)
T ss_pred e
Confidence 3
No 269
>PF03610 EIIA-man: PTS system fructose IIA component; InterPro: IPR004701 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) [, ] is a major carbohydrate transport system in bacteria. The PTS catalyses the phosphorylation of incoming sugar substrates and coupled with translocation across the cell membrane, makes the PTS a link between the uptake and metabolism of sugars. The general mechanism of the PTS is the following: a phosphoryl group from phosphoenolpyruvate (PEP) is transferred via a signal transduction pathway, to enzyme I (EI) which in turn transfers it to a phosphoryl carrier, the histidine protein (HPr). Phospho-HPr then transfers the phosphoryl group to a sugar-specific permease, a membrane-bound complex known as enzyme 2 (EII), which transports the sugar to the cell. EII consists of at least three structurally distinct domains IIA, IIB and IIC []. These can either be fused together in a single polypeptide chain or exist as two or three interactive chains, formerly called enzymes II (EII) and III (EIII). The first domain (IIA or EIIA) carries the first permease-specific phosphorylation site, a histidine which is phosphorylated by phospho-HPr. The second domain (IIB or EIIB) is phosphorylated by phospho-IIA on a cysteinyl or histidyl residue, depending on the sugar transported. Finally, the phosphoryl group is transferred from the IIB domain to the sugar substrate concomitantly with the sugar uptake processed by the IIC domain. This third domain (IIC or EIIC) forms the translocation channel and the specific substrate-binding site. An additional transmembrane domain IID, homologous to IIC, can be found in some PTSs, e.g. for mannose [, , , ]. The Man family is unique in several respects among PTS permease families. It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of Escherichia coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This family is specific for IIA and IIB components.; GO: 0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system, 0016021 integral to membrane; PDB: 3GDW_B 2JZN_A 1VSQ_A 2JZO_B 1VRC_A 1PDO_A 3GX1_A 3B48_B 3BED_B 3IPR_C ....
Probab=72.40 E-value=25 Score=23.19 Aligned_cols=75 Identities=21% Similarity=0.269 Sum_probs=52.5
Q ss_pred EEEEEcCCCCChhhHHHHHHHHHhC-CcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCCcEEEEEEehhH
Q 025845 11 HFVLVHGVNHGAWCWYKLKARLVAG-GHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGG 89 (247)
Q Consensus 11 ~iv~lhG~~~~~~~~~~~~~~l~~~-g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~lvGhS~Gg 89 (247)
.||.-|| .-+.-....++.+... .-.+.++++.- ..+++++.+.+.+.++.+...+.+.++-==+||
T Consensus 2 iii~sHG--~~A~g~~~~~~~i~G~~~~~i~~~~~~~----------~~~~~~~~~~l~~~i~~~~~~~~vlil~Dl~gg 69 (116)
T PF03610_consen 2 IIIASHG--SLAEGLLESAEMILGEDQDNIEAVDLYP----------DESIEDFEEKLEEAIEELDEGDGVLILTDLGGG 69 (116)
T ss_dssp EEEEEET--THHHHHHHHHHHHHTSTCSSEEEEEETT----------TSCHHHHHHHHHHHHHHCCTTSEEEEEESSTTS
T ss_pred EEEEECc--HHHHHHHHHHHHHcCCCcccEEEEECcC----------CCCHHHHHHHHHHHHHhccCCCcEEEEeeCCCC
Confidence 4788899 5556677777777755 34777777651 258999999999999988446677777766666
Q ss_pred HHHHHHHH
Q 025845 90 VTLALAAD 97 (247)
Q Consensus 90 ~ia~~~a~ 97 (247)
.....++.
T Consensus 70 sp~n~a~~ 77 (116)
T PF03610_consen 70 SPFNEAAR 77 (116)
T ss_dssp HHHHHHHH
T ss_pred ccchHHHH
Confidence 65555444
No 270
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=72.37 E-value=7.8 Score=29.12 Aligned_cols=31 Identities=23% Similarity=0.258 Sum_probs=23.2
Q ss_pred HHHHhCCCCCcEEEEEEehhHHHHHHHHHhCC
Q 025845 69 EVLASLPAEEKVILVGHSLGGVTLALAADKFP 100 (247)
Q Consensus 69 ~~i~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p 100 (247)
+.++.. +.+.-.++|-|.|+.++..+|...+
T Consensus 20 ~aL~e~-gi~~~~i~GtSaGAi~aa~~a~g~~ 50 (221)
T cd07210 20 AALLEM-GLEPSAISGTSAGALVGGLFASGIS 50 (221)
T ss_pred HHHHHc-CCCceEEEEeCHHHHHHHHHHcCCC
Confidence 334444 5667789999999999999987543
No 271
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=71.83 E-value=6.3 Score=31.28 Aligned_cols=34 Identities=21% Similarity=0.257 Sum_probs=27.2
Q ss_pred HHHHHHHHhCCCCCcEEEEEEehhHHHHHHHHHhC
Q 025845 65 EPLMEVLASLPAEEKVILVGHSLGGVTLALAADKF 99 (247)
Q Consensus 65 ~~l~~~i~~l~~~~~~~lvGhS~Gg~ia~~~a~~~ 99 (247)
--+.+.|+.. ++..-.+.|-|+|+.++..+|..+
T Consensus 27 iGVl~aL~e~-gi~~~~iaGtS~GAiva~l~A~g~ 60 (306)
T COG1752 27 IGVLKALEEA-GIPIDVIAGTSAGAIVAALYAAGM 60 (306)
T ss_pred HHHHHHHHHc-CCCccEEEecCHHHHHHHHHHcCC
Confidence 3455556666 788999999999999999998754
No 272
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=71.07 E-value=38 Score=27.78 Aligned_cols=39 Identities=21% Similarity=0.167 Sum_probs=31.0
Q ss_pred EEEEcCCCCChhhHHHHHHHHHhCCcEEEEecCCCCCCCCC
Q 025845 12 FVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMK 52 (247)
Q Consensus 12 iv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~ 52 (247)
|+|+|.... ..|+.+++.|.++|+.|..+-..+.+..+.
T Consensus 2 il~~~~~~p--~~~~~la~~L~~~G~~v~~~~~~~~~~~~~ 40 (396)
T cd03818 2 ILFVHQNFP--GQFRHLAPALAAQGHEVVFLTEPNAAPPPG 40 (396)
T ss_pred EEEECCCCc--hhHHHHHHHHHHCCCEEEEEecCCCCCCCC
Confidence 789988754 458999999999999999988777655443
No 273
>PRK06731 flhF flagellar biosynthesis regulator FlhF; Validated
Probab=70.67 E-value=49 Score=25.85 Aligned_cols=76 Identities=13% Similarity=0.128 Sum_probs=48.3
Q ss_pred hHHHHHHHHHh-CCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCCcEEEEE-EehhHHHHHHHHHhCC-
Q 025845 24 CWYKLKARLVA-GGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVG-HSLGGVTLALAADKFP- 100 (247)
Q Consensus 24 ~~~~~~~~l~~-~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~lvG-hS~Gg~ia~~~a~~~p- 100 (247)
.....+..+.+ .++.++.+|.+|... .-....+.+.+++... ....++||- -++++.-+...+.++.
T Consensus 141 ~l~~~l~~l~~~~~~D~ViIDt~Gr~~---------~~~~~l~el~~~~~~~-~~~~~~LVl~a~~~~~d~~~~~~~f~~ 210 (270)
T PRK06731 141 AMTRALTYFKEEARVDYILIDTAGKNY---------RASETVEEMIETMGQV-EPDYICLTLSASMKSKDMIEIITNFKD 210 (270)
T ss_pred HHHHHHHHHHhcCCCCEEEEECCCCCc---------CCHHHHHHHHHHHhhh-CCCeEEEEEcCccCHHHHHHHHHHhCC
Confidence 34444455543 369999999998842 2234455566666655 444566654 4678877777777754
Q ss_pred CccceEEEE
Q 025845 101 HKISVAVFV 109 (247)
Q Consensus 101 ~~v~~lvl~ 109 (247)
-.+.++|+.
T Consensus 211 ~~~~~~I~T 219 (270)
T PRK06731 211 IHIDGIVFT 219 (270)
T ss_pred CCCCEEEEE
Confidence 357888874
No 274
>KOG0781 consensus Signal recognition particle receptor, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=69.63 E-value=38 Score=28.82 Aligned_cols=87 Identities=18% Similarity=0.182 Sum_probs=57.3
Q ss_pred EEEcCCCCChhhHHH-HHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCCcEEEEEEehhHHH
Q 025845 13 VLVHGVNHGAWCWYK-LKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGVT 91 (247)
Q Consensus 13 v~lhG~~~~~~~~~~-~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~lvGhS~Gg~i 91 (247)
+|=-|++.+...-.. -+++-...||.||.+|-.|.-. +-..+-..+..+++.- ..+.+..||.-+=|.=
T Consensus 442 lfekGYgkd~a~vak~AI~~a~~~gfDVvLiDTAGR~~---------~~~~lm~~l~k~~~~~-~pd~i~~vgealvg~d 511 (587)
T KOG0781|consen 442 LFEKGYGKDAAGVAKEAIQEARNQGFDVVLIDTAGRMH---------NNAPLMTSLAKLIKVN-KPDLILFVGEALVGND 511 (587)
T ss_pred HHhhhcCCChHHHHHHHHHHHHhcCCCEEEEecccccc---------CChhHHHHHHHHHhcC-CCceEEEehhhhhCcH
Confidence 445577776554433 3344455899999999988643 3344556677788777 7888999998887766
Q ss_pred HHHHHHhC---------CCccceEEEE
Q 025845 92 LALAADKF---------PHKISVAVFV 109 (247)
Q Consensus 92 a~~~a~~~---------p~~v~~lvl~ 109 (247)
++.-+.++ |..+.++++.
T Consensus 512 sv~q~~~fn~al~~~~~~r~id~~~lt 538 (587)
T KOG0781|consen 512 SVDQLKKFNRALADHSTPRLIDGILLT 538 (587)
T ss_pred HHHHHHHHHHHHhcCCCccccceEEEE
Confidence 65544332 3457777753
No 275
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=68.49 E-value=6.4 Score=31.59 Aligned_cols=86 Identities=14% Similarity=0.202 Sum_probs=56.5
Q ss_pred cEEEEEcCCCCCh-------hhHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCCcEEE
Q 025845 10 KHFVLVHGVNHGA-------WCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVIL 82 (247)
Q Consensus 10 ~~iv~lhG~~~~~-------~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~l 82 (247)
.-+|++|.-..+. +.|+.+.+.+.++ -.+-.+|+...|..+ -+++..|..+.-+++.- .-++
T Consensus 198 gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k-~~~pffDmAYQGfaS------G~~d~DA~avR~F~~~g----~~~~ 266 (427)
T KOG1411|consen 198 GSIILLHACAHNPTGVDPTKEQWEKISDLIKEK-NLLPFFDMAYQGFAS------GDLDKDAQAVRLFVEDG----HEIL 266 (427)
T ss_pred CcEEEeehhhcCCCCCCccHHHHHHHHHHhhhc-cccchhhhhhccccc------CCchhhHHHHHHHHHcC----CceE
Confidence 3589999876544 4899999988865 466667877766554 35666777777777642 2244
Q ss_pred EEEehhHHHHHHHHHhCCCccceEEEEec
Q 025845 83 VGHSLGGVTLALAADKFPHKISVAVFVTA 111 (247)
Q Consensus 83 vGhS~Gg~ia~~~a~~~p~~v~~lvl~~~ 111 (247)
+..|+.=.+. .|.+||.++..++.
T Consensus 267 laQSyAKNMG-----LYgERvGa~svvc~ 290 (427)
T KOG1411|consen 267 LAQSYAKNMG-----LYGERVGALSVVCK 290 (427)
T ss_pred eehhhhhhcc-----hhhhccceeEEEec
Confidence 4444432221 36789999887775
No 276
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=68.41 E-value=9.4 Score=28.50 Aligned_cols=33 Identities=33% Similarity=0.432 Sum_probs=25.1
Q ss_pred HHHHHHhCCCCCcEEEEEEehhHHHHHHHHHhCC
Q 025845 67 LMEVLASLPAEEKVILVGHSLGGVTLALAADKFP 100 (247)
Q Consensus 67 l~~~i~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p 100 (247)
+.+.+... +...-.++|.|.|+.++..+|...+
T Consensus 16 vl~aL~e~-g~~~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 16 VLKALAEA-GIEPDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred HHHHHHHc-CCCCCEEEEECHHHHHHHHHHcCCc
Confidence 33444455 5667789999999999999998764
No 277
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=68.31 E-value=5.2 Score=30.92 Aligned_cols=22 Identities=41% Similarity=0.706 Sum_probs=17.0
Q ss_pred HHHHhCCCCCcEEEEEEehhHH
Q 025845 69 EVLASLPAEEKVILVGHSLGGV 90 (247)
Q Consensus 69 ~~i~~l~~~~~~~lvGhS~Gg~ 90 (247)
.++..+...+.++++|||+|..
T Consensus 226 ~~~~~l~~i~~I~i~GhSl~~~ 247 (270)
T PF14253_consen 226 SFFESLSDIDEIIIYGHSLGEV 247 (270)
T ss_pred HHHhhhcCCCEEEEEeCCCchh
Confidence 4455555678999999999985
No 278
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=67.56 E-value=26 Score=24.76 Aligned_cols=36 Identities=22% Similarity=0.255 Sum_probs=27.1
Q ss_pred CcEEEEEcCCCCChhh--HHHHHHHHHhCCcEEEEecC
Q 025845 9 EKHFVLVHGVNHGAWC--WYKLKARLVAGGHRVTAVDL 44 (247)
Q Consensus 9 ~~~iv~lhG~~~~~~~--~~~~~~~l~~~g~~vi~~D~ 44 (247)
++.+|++-|+.++... -..+...|.+.|+.++..|-
T Consensus 1 ~g~vIwltGlsGsGKtTlA~~L~~~L~~~g~~~~~LDg 38 (156)
T PF01583_consen 1 KGFVIWLTGLSGSGKTTLARALERRLFARGIKVYLLDG 38 (156)
T ss_dssp S-EEEEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEEH
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEecC
Confidence 3689999999887654 45677788778999999985
No 279
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=67.53 E-value=7 Score=33.69 Aligned_cols=32 Identities=19% Similarity=0.248 Sum_probs=25.3
Q ss_pred HHHHH-HhCCCCCcEEEEEEehhHHHHHHHHHhC
Q 025845 67 LMEVL-ASLPAEEKVILVGHSLGGVTLALAADKF 99 (247)
Q Consensus 67 l~~~i-~~l~~~~~~~lvGhS~Gg~ia~~~a~~~ 99 (247)
+.+++ +.+ ++++-.++|||+|=+.|+..|--.
T Consensus 254 La~ll~~~~-GI~Pdav~GHSlGE~aAa~aAGvl 286 (538)
T TIGR02816 254 LTQLLCDEF-AIKPDFALGYSKGEASMWASLGVW 286 (538)
T ss_pred HHHHHHHhc-CCCCCEEeecCHHHHHHHHHhCCC
Confidence 34555 467 899999999999999888877644
No 280
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=67.37 E-value=9.8 Score=27.28 Aligned_cols=30 Identities=30% Similarity=0.263 Sum_probs=22.8
Q ss_pred HHHhCCCCCcEEEEEEehhHHHHHHHHHhCC
Q 025845 70 VLASLPAEEKVILVGHSLGGVTLALAADKFP 100 (247)
Q Consensus 70 ~i~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p 100 (247)
.++.. +...-.++|.|.|+.++..++...+
T Consensus 21 ~L~e~-g~~~d~i~GtSaGAi~aa~~a~g~~ 50 (175)
T cd07228 21 ALEEE-GIEIDIIAGSSIGALVGALYAAGHL 50 (175)
T ss_pred HHHHC-CCCeeEEEEeCHHHHHHHHHHcCCC
Confidence 33444 5567788999999999999987654
No 281
>KOG0736 consensus Peroxisome assembly factor 2 containing the AAA+-type ATPase domain [Posttranslational modification, protein turnover, chaperones]
Probab=66.64 E-value=99 Score=28.31 Aligned_cols=89 Identities=19% Similarity=0.160 Sum_probs=56.8
Q ss_pred cEEEEecC-----CCCCCCCCcccCccCHHHhHHHHHHHHHhCC--CCCcEEEEEEehhHHHHHHHHHhCCCccceEEEE
Q 025845 37 HRVTAVDL-----AASGINMKRIEDVHTFHAYSEPLMEVLASLP--AEEKVILVGHSLGGVTLALAADKFPHKISVAVFV 109 (247)
Q Consensus 37 ~~vi~~D~-----~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~--~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~ 109 (247)
=-||.||= |..|.|.... .-+++.+..+.+-+|.+. ..+++.++|-+-=-= .+.=|...|.|.++|+.+
T Consensus 765 PCVIFFDELDSlAP~RG~sGDSG---GVMDRVVSQLLAELDgls~~~s~~VFViGATNRPD-LLDpALLRPGRFDKLvyv 840 (953)
T KOG0736|consen 765 PCVIFFDELDSLAPNRGRSGDSG---GVMDRVVSQLLAELDGLSDSSSQDVFVIGATNRPD-LLDPALLRPGRFDKLVYV 840 (953)
T ss_pred CeEEEeccccccCccCCCCCCcc---ccHHHHHHHHHHHhhcccCCCCCceEEEecCCCcc-ccChhhcCCCccceeEEe
Confidence 45777774 4555554322 478889999999999983 457899998332111 112233457789999999
Q ss_pred eccCCCCCCChHHHHHHHHHhh
Q 025845 110 TAFMPDTTHRPSFVLEQYSEKM 131 (247)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~ 131 (247)
+++ ...++....++.+.+.+
T Consensus 841 G~~--~d~esk~~vL~AlTrkF 860 (953)
T KOG0736|consen 841 GPN--EDAESKLRVLEALTRKF 860 (953)
T ss_pred cCC--ccHHHHHHHHHHHHHHc
Confidence 985 33444445666666655
No 282
>cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption.
Probab=66.44 E-value=43 Score=24.92 Aligned_cols=83 Identities=13% Similarity=0.038 Sum_probs=49.8
Q ss_pred CCcEEEEEcCCCCChhh-HHHHHHHHHhC-CcEEEEecCCCCCCCCCcc----------cCccCHHHhHHHH-----HHH
Q 025845 8 EEKHFVLVHGVNHGAWC-WYKLKARLVAG-GHRVTAVDLAASGINMKRI----------EDVHTFHAYSEPL-----MEV 70 (247)
Q Consensus 8 ~~~~iv~lhG~~~~~~~-~~~~~~~l~~~-g~~vi~~D~~G~G~S~~~~----------~~~~~~~~~~~~l-----~~~ 70 (247)
.++.|+|++-....... ...+...|.+. |+.+..++... ...... .. -+...+.+.+ .++
T Consensus 30 ~~~~i~~IptAs~~~~~~~~~~~~a~~~l~G~~~~~~~~~~--~~~~~~~l~~ad~I~l~G-G~~~~~~~~l~~~~l~~~ 106 (212)
T cd03146 30 ARPKVLFVPTASGDRDEYTARFYAAFESLRGVEVSHLHLFD--TEDPLDALLEADVIYVGG-GNTFNLLAQWREHGLDAI 106 (212)
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHHhhccCcEEEEEeccC--cccHHHHHhcCCEEEECC-chHHHHHHHHHHcCHHHH
Confidence 56789999998876544 45666777777 89988887643 111000 01 1233333222 233
Q ss_pred HHhCCCCCcEEEEEEehhHHHHHH
Q 025845 71 LASLPAEEKVILVGHSLGGVTLAL 94 (247)
Q Consensus 71 i~~l~~~~~~~lvGhS~Gg~ia~~ 94 (247)
++.. -.+...++|.|.|+++...
T Consensus 107 l~~~-~~~g~~i~G~SAGa~i~~~ 129 (212)
T cd03146 107 LKAA-LERGVVYIGWSAGSNCWFP 129 (212)
T ss_pred HHHH-HHCCCEEEEECHhHHhhCC
Confidence 3333 2346789999999987655
No 283
>cd00006 PTS_IIA_man PTS_IIA, PTS system, mannose/sorbose specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIA PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation. IIA subunits receive phosphoryl groups from HPr and transfer them to IIB subunits, which in turn phosphorylate the substrate.
Probab=64.64 E-value=39 Score=22.51 Aligned_cols=73 Identities=21% Similarity=0.230 Sum_probs=49.7
Q ss_pred EEEEEcCCCCChhhHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCCcEEEEEEehhHH
Q 025845 11 HFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGV 90 (247)
Q Consensus 11 ~iv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~lvGhS~Gg~ 90 (247)
.|+.-|| .-+.-....++.+....-.+.++++.- ..+++++.+.+.++++.....+.+.++-==+||.
T Consensus 3 ili~sHG--~~A~gi~~~~~~i~G~~~~i~~~~~~~----------~~~~~~~~~~i~~~i~~~~~~~~viil~Dl~GGS 70 (122)
T cd00006 3 IIIATHG--GFASGLLNSAEMILGEQENVEAIDFPP----------GESPDDLLEKIKAALAELDSGEGVLILTDLFGGS 70 (122)
T ss_pred EEEEcCH--HHHHHHHHHHHHhcCCCCCeEEEEeCC----------CCCHHHHHHHHHHHHHHhCCCCcEEEEEeCCCCC
Confidence 5788888 444556666666654434777887662 2488899999999999883346677776555887
Q ss_pred HHHHH
Q 025845 91 TLALA 95 (247)
Q Consensus 91 ia~~~ 95 (247)
+...+
T Consensus 71 p~n~~ 75 (122)
T cd00006 71 PNNAA 75 (122)
T ss_pred HHHHH
Confidence 65443
No 284
>PHA02114 hypothetical protein
Probab=64.26 E-value=12 Score=23.78 Aligned_cols=33 Identities=27% Similarity=0.328 Sum_probs=26.5
Q ss_pred EEEEEcCCCCChhhHHHHHHHHHhCCcEEEEec
Q 025845 11 HFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVD 43 (247)
Q Consensus 11 ~iv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D 43 (247)
+||+=--+.++..-|-.++..|.+.||.|++-.
T Consensus 84 tivldvn~amsr~pwi~v~s~le~~g~~vvatq 116 (127)
T PHA02114 84 TIVLDVNYAMSRAPWIKVISRLEEAGFNVVATQ 116 (127)
T ss_pred eEEEEehhhhccCcHHHHHHHHHhcCceeeehh
Confidence 566666677888889999999988899998754
No 285
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=64.24 E-value=15 Score=26.23 Aligned_cols=30 Identities=27% Similarity=0.277 Sum_probs=22.4
Q ss_pred HHHHhCCCCCcEEEEEEehhHHHHHHHHHhC
Q 025845 69 EVLASLPAEEKVILVGHSLGGVTLALAADKF 99 (247)
Q Consensus 69 ~~i~~l~~~~~~~lvGhS~Gg~ia~~~a~~~ 99 (247)
+.++.. +...-.++|-|.|+.+|..++...
T Consensus 20 ~~L~~~-~~~~d~i~GtSaGal~a~~~a~g~ 49 (175)
T cd07205 20 KALEEA-GIPIDIVSGTSAGAIVGALYAAGY 49 (175)
T ss_pred HHHHHc-CCCeeEEEEECHHHHHHHHHHcCC
Confidence 334444 456678999999999999998654
No 286
>PRK02399 hypothetical protein; Provisional
Probab=63.47 E-value=87 Score=26.08 Aligned_cols=97 Identities=19% Similarity=0.131 Sum_probs=61.3
Q ss_pred EEEcCCCCCh-hhHHHHHHHHHhCCcEEEEecCCCCCCCCCcc----------------------cCccCHHHhHHHHHH
Q 025845 13 VLVHGVNHGA-WCWYKLKARLVAGGHRVTAVDLAASGINMKRI----------------------EDVHTFHAYSEPLME 69 (247)
Q Consensus 13 v~lhG~~~~~-~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~----------------------~~~~~~~~~~~~l~~ 69 (247)
|++=|-..+. ..+.-+.+.+.+.|..|+.+|.-..|....+. +....++.+++-...
T Consensus 6 I~iigT~DTK~~E~~yl~~~i~~~g~~v~~iDv~~~~~p~~~~dis~~~Va~~~g~~~~~~~~~~dRg~ai~~M~~ga~~ 85 (406)
T PRK02399 6 IYIAGTLDTKGEELAYVKDLIEAAGLEVVTVDVSGLGEPPFEPDISAEEVAEAAGDGIEAVFCGGDRGSAMAAMAEGAAA 85 (406)
T ss_pred EEEEeccCCcHHHHHHHHHHHHHCCCceEEEecCCCCCCCCCCCCCHHHHHHHcCCCHHHhhcCccHHHHHHHHHHHHHH
Confidence 4444555544 45667777777779999999984343111110 001133445555555
Q ss_pred HHHhC---CCCCcEEEEEEehhHHHHHHHHHhCCCccceEEEE
Q 025845 70 VLASL---PAEEKVILVGHSLGGVTLALAADKFPHKISVAVFV 109 (247)
Q Consensus 70 ~i~~l---~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~ 109 (247)
++..| ..+.-++-+|-|.|..++.......|=-+-|+++.
T Consensus 86 ~v~~L~~~g~i~gviglGGs~GT~lat~aMr~LPiG~PKlmVS 128 (406)
T PRK02399 86 FVRELYERGDVAGVIGLGGSGGTALATPAMRALPIGVPKLMVS 128 (406)
T ss_pred HHHHHHhcCCccEEEEecCcchHHHHHHHHHhCCCCCCeEEEE
Confidence 65544 24677888899999999999998888667666643
No 287
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=62.78 E-value=14 Score=29.45 Aligned_cols=20 Identities=20% Similarity=0.230 Sum_probs=16.9
Q ss_pred EEEEEehhHHHHHHHHHhCC
Q 025845 81 ILVGHSLGGVTLALAADKFP 100 (247)
Q Consensus 81 ~lvGhS~Gg~ia~~~a~~~p 100 (247)
.++|.|+||.+|..++..++
T Consensus 35 ~i~GTStGgiIA~~la~g~s 54 (312)
T cd07212 35 WIAGTSTGGILALALLHGKS 54 (312)
T ss_pred EEEeeChHHHHHHHHHcCCC
Confidence 47799999999999997553
No 288
>COG3727 Vsr DNA G:T-mismatch repair endonuclease [DNA replication, recombination, and repair]
Probab=61.48 E-value=26 Score=23.80 Aligned_cols=35 Identities=29% Similarity=0.323 Sum_probs=23.9
Q ss_pred CcEEEEEcCCC-------------CChhhH-----------HHHHHHHHhCCcEEEEec
Q 025845 9 EKHFVLVHGVN-------------HGAWCW-----------YKLKARLVAGGHRVTAVD 43 (247)
Q Consensus 9 ~~~iv~lhG~~-------------~~~~~~-----------~~~~~~l~~~g~~vi~~D 43 (247)
-..+||+||-. .+.+.| +..+..|.+.|++|+.+-
T Consensus 57 y~~viFvHGCFWh~H~c~~a~vPksnt~fWleKi~kNveRD~r~~~~L~~~GwrvlvVW 115 (150)
T COG3727 57 YRCVIFVHGCFWHGHHCYLAKVPKSNTEFWLEKIGKNVERDERDIKRLQQLGWRVLVVW 115 (150)
T ss_pred ceEEEEEeeeeccCCccccccCCCcchHHHHHHHhhhhhhhHHHHHHHHHcCCeEEEEE
Confidence 35789999953 233446 245567888899988863
No 289
>PRK07313 phosphopantothenoylcysteine decarboxylase; Validated
Probab=61.11 E-value=42 Score=24.40 Aligned_cols=62 Identities=10% Similarity=-0.010 Sum_probs=36.8
Q ss_pred CCcEEEEEcCCC---CChhhHHHHHHHHHhCCcEEEEecCCCC---CCCCCcccCccCHHHhHHHHHHHHH
Q 025845 8 EEKHFVLVHGVN---HGAWCWYKLKARLVAGGHRVTAVDLAAS---GINMKRIEDVHTFHAYSEPLMEVLA 72 (247)
Q Consensus 8 ~~~~iv~lhG~~---~~~~~~~~~~~~l~~~g~~vi~~D~~G~---G~S~~~~~~~~~~~~~~~~l~~~i~ 72 (247)
.+.|||+++-.. ............|++.|+.|+-+. +|+ |...... .-++++.++.+...+.
T Consensus 112 ~~~pvvi~Pamn~~m~~~p~~~~Nl~~L~~~G~~vi~p~-~g~la~~~~g~g~--~~~~~~i~~~v~~~~~ 179 (182)
T PRK07313 112 ATTPKLIAPAMNTKMYENPATQRNLKTLKEDGVQEIEPK-EGLLACGDEGYGA--LADIETILETIENTLK 179 (182)
T ss_pred CCCCEEEEECCCHHHhcCHHHHHHHHHHHHCCCEEECCC-CCccccCCccCCC--CCCHHHHHHHHHHHhc
Confidence 356788887432 122234566778888888888776 555 4332222 2367777777766554
No 290
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=60.15 E-value=17 Score=28.39 Aligned_cols=51 Identities=27% Similarity=0.341 Sum_probs=34.3
Q ss_pred HhHHHHHHHHHhCC--CCCcEEEEEEehhHHHHHHHHH---hCCCccceEEEEecc
Q 025845 62 AYSEPLMEVLASLP--AEEKVILVGHSLGGVTLALAAD---KFPHKISVAVFVTAF 112 (247)
Q Consensus 62 ~~~~~l~~~i~~l~--~~~~~~lvGhS~Gg~ia~~~a~---~~p~~v~~lvl~~~~ 112 (247)
.+.+.+.+-++.++ .-.+++|.|.|+|++-+...-. ..-+++.+.++++++
T Consensus 91 aL~~aV~~~~~~lP~~~RPkL~l~GeSLGa~g~~~af~~~~~~~~~vdGalw~GpP 146 (289)
T PF10081_consen 91 ALFEAVYARWSTLPEDRRPKLYLYGESLGAYGGEAAFDGLDDLRDRVDGALWVGPP 146 (289)
T ss_pred HHHHHHHHHHHhCCcccCCeEEEeccCccccchhhhhccHHHhhhhcceEEEeCCC
Confidence 34445555556662 2358999999999987655432 233579999999985
No 291
>PRK14729 miaA tRNA delta(2)-isopentenylpyrophosphate transferase; Provisional
Probab=59.65 E-value=59 Score=25.85 Aligned_cols=74 Identities=14% Similarity=0.207 Sum_probs=45.5
Q ss_pred CcEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEecC----CCC--C----------------CCCCcccCccCHHHhHHH
Q 025845 9 EKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDL----AAS--G----------------INMKRIEDVHTFHAYSEP 66 (247)
Q Consensus 9 ~~~iv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D~----~G~--G----------------~S~~~~~~~~~~~~~~~~ 66 (247)
.++||++-|-.++...- ++-.|++++-.+|..|= +|. | .+--.+.+.++..+|.++
T Consensus 3 ~~~ii~I~GpTasGKS~--LAl~LA~~~~eIIsaDS~QvYr~ldIgTaKpt~eE~~~i~Hhlid~~~p~e~~sv~~f~~~ 80 (300)
T PRK14729 3 ENKIVFIFGPTAVGKSN--ILFHFPKGKAEIINVDSIQVYKEFDIASCKPSKELRKHIKHHLVDFLEPIKEYNLGIFYKE 80 (300)
T ss_pred CCcEEEEECCCccCHHH--HHHHHHHhCCcEEeccHHHHHCCCceecCCCCHHHHcCCCeeeeeccCCCCceeHHHHHHH
Confidence 45688888888776652 22344443347888884 221 1 111122245899999999
Q ss_pred HHHHHHhC-CCCCcEEEEE
Q 025845 67 LMEVLASL-PAEEKVILVG 84 (247)
Q Consensus 67 l~~~i~~l-~~~~~~~lvG 84 (247)
..+.|+.+ ...+..+|||
T Consensus 81 a~~~i~~i~~~gk~PilvG 99 (300)
T PRK14729 81 ALKIIKELRQQKKIPIFVG 99 (300)
T ss_pred HHHHHHHHHHCCCCEEEEe
Confidence 99999876 2345567777
No 292
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=59.39 E-value=77 Score=24.15 Aligned_cols=38 Identities=16% Similarity=0.018 Sum_probs=28.4
Q ss_pred CCcEEEEEcCCCC--Chhh-HHHHHHHHHhCCcEEEEecCC
Q 025845 8 EEKHFVLVHGVNH--GAWC-WYKLKARLVAGGHRVTAVDLA 45 (247)
Q Consensus 8 ~~~~iv~lhG~~~--~~~~-~~~~~~~l~~~g~~vi~~D~~ 45 (247)
.+|.|+|++-... +... .+...+.+.+.|+.|..++..
T Consensus 30 ~~~~v~fIPtAs~~~~~~~y~~~~~~af~~lG~~v~~l~~~ 70 (233)
T PRK05282 30 GRRKAVFIPYAGVTQSWDDYTAKVAEALAPLGIEVTGIHRV 70 (233)
T ss_pred CCCeEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEeccc
Confidence 4688999999873 3444 355667888789999888865
No 293
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=59.25 E-value=6.5 Score=32.80 Aligned_cols=36 Identities=17% Similarity=0.209 Sum_probs=25.8
Q ss_pred HHHHHHHhCCCCCcEEEEEEehhHHHHHHHHHhCCCc
Q 025845 66 PLMEVLASLPAEEKVILVGHSLGGVTLALAADKFPHK 102 (247)
Q Consensus 66 ~l~~~i~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~ 102 (247)
-+.+.+... +..+-+++|-|.|+.+|..++...++.
T Consensus 90 GVLkaL~E~-gl~p~vIsGTSaGAivAal~as~~~ee 125 (421)
T cd07230 90 GVLKALFEA-NLLPRIISGSSAGSIVAAILCTHTDEE 125 (421)
T ss_pred HHHHHHHHc-CCCCCEEEEECHHHHHHHHHHcCCHHH
Confidence 333334334 566778999999999999999865554
No 294
>PF03283 PAE: Pectinacetylesterase
Probab=59.01 E-value=29 Score=28.42 Aligned_cols=45 Identities=33% Similarity=0.628 Sum_probs=29.8
Q ss_pred HHHHHHh-CCCCCcEEEEEEehhHHHHHHHH----HhCCCccceEEEEec
Q 025845 67 LMEVLAS-LPAEEKVILVGHSLGGVTLALAA----DKFPHKISVAVFVTA 111 (247)
Q Consensus 67 l~~~i~~-l~~~~~~~lvGhS~Gg~ia~~~a----~~~p~~v~~lvl~~~ 111 (247)
+.+++.. +.+.++++|-|.|-||.-++..+ ...|..++-..+.++
T Consensus 144 l~~l~~~gl~~a~~vlltG~SAGG~g~~~~~d~~~~~lp~~~~v~~~~Ds 193 (361)
T PF03283_consen 144 LDDLLSNGLPNAKQVLLTGCSAGGLGAILHADYVRDRLPSSVKVKCLSDS 193 (361)
T ss_pred HHHHHHhcCcccceEEEeccChHHHHHHHHHHHHHHHhccCceEEEeccc
Confidence 3344554 55678999999999998776644 356755555555555
No 295
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=58.97 E-value=73 Score=23.72 Aligned_cols=62 Identities=26% Similarity=0.208 Sum_probs=35.3
Q ss_pred EEEEEcCCCCChhhHHHHHHHHHhCCcEEEEecCC------------CCCCCCCcccCccCHHHhHHHHHHHHHhC
Q 025845 11 HFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLA------------ASGINMKRIEDVHTFHAYSEPLMEVLASL 74 (247)
Q Consensus 11 ~iv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D~~------------G~G~S~~~~~~~~~~~~~~~~l~~~i~~l 74 (247)
++..+-| ++...=+.++..|+++|++|++.|+. |+|.-....-+...-++...-+.+.++.+
T Consensus 15 k~~~vtG--g~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~ 88 (256)
T KOG1200|consen 15 KVAAVTG--GSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSL 88 (256)
T ss_pred ceeEEec--CCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhc
Confidence 3444444 33445567788899999999999875 33322222212223333333477777777
No 296
>cd00739 DHPS DHPS subgroup of Pterin binding enzymes. DHPS (dihydropteroate synthase), a functional homodimer, catalyzes the condensation of p-aminobenzoic acid (pABA) in the de novo biosynthesis of folate, which is an essential cofactor in both nucleic acid and protein biosynthesis. Prokaryotes (and some lower eukaryotes) must synthesize folate de novo, while higher eukaryotes are able to utilize dietary folate and therefore lack DHPS. Sulfonamide drugs, which are substrate analogs of pABA, target DHPS.
Probab=57.86 E-value=56 Score=25.27 Aligned_cols=59 Identities=17% Similarity=0.074 Sum_probs=30.9
Q ss_pred HHHHHHHHHhCCcE--EEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCCcEEEEEEehhHHHH
Q 025845 25 WYKLKARLVAGGHR--VTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGVTL 92 (247)
Q Consensus 25 ~~~~~~~l~~~g~~--vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~lvGhS~Gg~ia 92 (247)
+...++.+.+.|+. =|.+| ||.|.+... +..-.+.+-++.+...+-..++|.|-=.++.
T Consensus 152 ~~~~i~~~~~~Gi~~~~Ii~D-Pg~gf~ks~--------~~~~~~l~~i~~l~~~~~pil~G~SrkSfig 212 (257)
T cd00739 152 LEARLEAAESAGVARNRIILD-PGIGFGKTP--------EHNLELLRRLDELKQLGLPVLVGASRKSFIG 212 (257)
T ss_pred HHHHHHHHHHcCCCHHHEEEe-cCCCcccCH--------HHHHHHHHHHHHHHhCCCcEEEEecccHHHH
Confidence 45555666667764 67788 477654321 1111222222222122456788987766654
No 297
>COG0400 Predicted esterase [General function prediction only]
Probab=57.82 E-value=7 Score=29.06 Aligned_cols=51 Identities=4% Similarity=-0.229 Sum_probs=34.6
Q ss_pred HHhhhhhhccchhHHHHHHHHHHHhh----cCCcceeeecCCCccccccChhhHHHH
Q 025845 190 LRQIVSYLYLDSDTMQIMLNFIIIII----ITTHMSELINCSRRAFFLYHNTLFIQF 242 (247)
Q Consensus 190 ~~~~l~~g~~D~~~p~~~~~~~~~~~----~~~~~~~~i~~~gH~~~~e~p~~~~~~ 242 (247)
.+..+.+|++|.++|...+..+. +. .-+++...++ .||....|.-+...+.
T Consensus 147 ~pill~hG~~Dpvvp~~~~~~l~-~~l~~~g~~v~~~~~~-~GH~i~~e~~~~~~~w 201 (207)
T COG0400 147 TPILLSHGTEDPVVPLALAEALA-EYLTASGADVEVRWHE-GGHEIPPEELEAARSW 201 (207)
T ss_pred CeEEEeccCcCCccCHHHHHHHH-HHHHHcCCCEEEEEec-CCCcCCHHHHHHHHHH
Confidence 33445559999999998887765 33 3456677888 8998666655444443
No 298
>KOG2872 consensus Uroporphyrinogen decarboxylase [Coenzyme transport and metabolism]
Probab=57.76 E-value=57 Score=25.69 Aligned_cols=68 Identities=12% Similarity=0.226 Sum_probs=43.6
Q ss_pred cEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEecCCC--------CCCC-------CCcccCccCHHHhHHHHHHHHHhC
Q 025845 10 KHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAA--------SGIN-------MKRIEDVHTFHAYSEPLMEVLASL 74 (247)
Q Consensus 10 ~~iv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G--------~G~S-------~~~~~~~~~~~~~~~~l~~~i~~l 74 (247)
|-|+|..|.++. .+.|+..||.||..|+-= -|.. ++... .-+.+...+.+.+.++..
T Consensus 253 Pmi~fakG~g~~-------Le~l~~tG~DVvgLDWTvdp~ear~~~g~~VtlQGNlDP~~l-y~s~e~it~~v~~mv~~f 324 (359)
T KOG2872|consen 253 PMILFAKGSGGA-------LEELAQTGYDVVGLDWTVDPAEARRRVGNRVTLQGNLDPGVL-YGSKEEITQLVKQMVKDF 324 (359)
T ss_pred ceEEEEcCcchH-------HHHHHhcCCcEEeecccccHHHHHHhhCCceEEecCCChHHh-cCCHHHHHHHHHHHHHHh
Confidence 778999887652 356777899999999831 1211 11111 237788888888999998
Q ss_pred CCCCc-EEEEEEe
Q 025845 75 PAEEK-VILVGHS 86 (247)
Q Consensus 75 ~~~~~-~~lvGhS 86 (247)
+.++ +.=.||.
T Consensus 325 -G~~ryI~NLGHG 336 (359)
T KOG2872|consen 325 -GKSRYIANLGHG 336 (359)
T ss_pred -CccceEEecCCC
Confidence 4333 3334653
No 299
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=57.72 E-value=20 Score=27.74 Aligned_cols=26 Identities=15% Similarity=0.065 Sum_probs=20.5
Q ss_pred CCC-cEEEEEEehhHHHHHHHHHhCCC
Q 025845 76 AEE-KVILVGHSLGGVTLALAADKFPH 101 (247)
Q Consensus 76 ~~~-~~~lvGhS~Gg~ia~~~a~~~p~ 101 (247)
+.. .-.++|.|.|+.++..++...+.
T Consensus 24 ~~~~fd~i~GtSaGAi~a~~~~~g~~~ 50 (266)
T cd07208 24 GIRPFDLVIGVSAGALNAASYLSGQRG 50 (266)
T ss_pred CCCCCCEEEEECHHHHhHHHHHhCCcc
Confidence 344 55889999999999999886554
No 300
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=57.53 E-value=5.8 Score=28.04 Aligned_cols=47 Identities=19% Similarity=0.198 Sum_probs=21.1
Q ss_pred CCCCCCCCC--cccCccCHHHhHHHHH----HHHHhC---CCCCcEEEEEEehhHH
Q 025845 44 LAASGINMK--RIEDVHTFHAYSEPLM----EVLASL---PAEEKVILVGHSLGGV 90 (247)
Q Consensus 44 ~~G~G~S~~--~~~~~~~~~~~~~~l~----~~i~~l---~~~~~~~lvGhS~Gg~ 90 (247)
+-|||.... ..-..++..+++..+. .+-+.. ...+++.|+|-|++..
T Consensus 61 lVGHG~~~~~~~~l~g~~a~~La~~l~~~~~~l~~~~~~~~~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 61 LVGHGRDEFNNQTLAGYSADELANKLIKFKQQLKQKYGINISPKKISLVGCSLADN 116 (157)
T ss_dssp EE--EESSTSSSEETTEEHHHHHHHHHHHHHHHHHHHTTT--ESEEEEESSS-S-T
T ss_pred EEEeCCCcCCCceeCCCCHHHHHHHHHHHHHHHHHhccCCCCCCEEEEEEecccCC
Confidence 446776511 1112356777776663 333222 1345677777776665
No 301
>PF05724 TPMT: Thiopurine S-methyltransferase (TPMT); InterPro: IPR008854 This family consists of thiopurine S-methyltransferase proteins from both eukaryotes and prokaryotes. Thiopurine S-methyltransferase (TPMT) is a cytosolic enzyme that catalyses S-methylation of aromatic and heterocyclic sulphydryl compounds, including anticancer and immunosuppressive thiopurines [].; GO: 0008119 thiopurine S-methyltransferase activity, 0008152 metabolic process, 0005737 cytoplasm; PDB: 1PJZ_A 2H11_A 2BZG_A 3LCC_A 3BGD_A 2GB4_A 3BGI_B.
Probab=56.97 E-value=16 Score=27.39 Aligned_cols=31 Identities=39% Similarity=0.427 Sum_probs=22.7
Q ss_pred cEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEecCC
Q 025845 10 KHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLA 45 (247)
Q Consensus 10 ~~iv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D~~ 45 (247)
+.=||++|=|-+.+. ..|+++||+|+.+|+-
T Consensus 38 ~~rvLvPgCG~g~D~-----~~La~~G~~VvGvDls 68 (218)
T PF05724_consen 38 GGRVLVPGCGKGYDM-----LWLAEQGHDVVGVDLS 68 (218)
T ss_dssp SEEEEETTTTTSCHH-----HHHHHTTEEEEEEES-
T ss_pred CCeEEEeCCCChHHH-----HHHHHCCCeEEEEecC
Confidence 345888887766554 5677789999999964
No 302
>TIGR00959 ffh signal recognition particle protein. This model represents Ffh (Fifty-Four Homolog), the protein component that forms the bacterial (and organellar) signal recognition particle together with a 4.5S RNA. Ffh is a GTPase homologous to eukaryotic SRP54 and also to the GTPase FtsY (TIGR00064) that is the receptor for the signal recognition particle.
Probab=56.58 E-value=1.2e+02 Score=25.56 Aligned_cols=72 Identities=19% Similarity=0.190 Sum_probs=46.0
Q ss_pred HHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCCcEEEEEEehhHHHHHHHHHhCCC--ccce
Q 025845 28 LKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGVTLALAADKFPH--KISV 105 (247)
Q Consensus 28 ~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~--~v~~ 105 (247)
....+...+|.++.+|-+|... .-+...+.+.++.+.+ ....+++|--++-|.-+...|..+-+ .+.+
T Consensus 174 al~~~~~~~~DvVIIDTaGr~~---------~d~~l~~eL~~i~~~~-~p~e~lLVvda~tgq~~~~~a~~f~~~v~i~g 243 (428)
T TIGR00959 174 ALEYAKENGFDVVIVDTAGRLQ---------IDEELMEELAAIKEIL-NPDEILLVVDAMTGQDAVNTAKTFNERLGLTG 243 (428)
T ss_pred HHHHHHhcCCCEEEEeCCCccc---------cCHHHHHHHHHHHHhh-CCceEEEEEeccchHHHHHHHHHHHhhCCCCE
Confidence 3344444679999999998742 2234556666666666 56677777666666666666655432 4677
Q ss_pred EEEE
Q 025845 106 AVFV 109 (247)
Q Consensus 106 lvl~ 109 (247)
+|+.
T Consensus 244 iIlT 247 (428)
T TIGR00959 244 VVLT 247 (428)
T ss_pred EEEe
Confidence 7765
No 303
>PF03205 MobB: Molybdopterin guanine dinucleotide synthesis protein B; PDB: 2F1R_B 1P9N_A 1NP6_B 2NPI_A 1XJC_A.
Probab=56.23 E-value=27 Score=24.09 Aligned_cols=44 Identities=23% Similarity=0.137 Sum_probs=28.3
Q ss_pred EEEEEcCCCCChhh--HHHHHHHHHhCCcEEEEecCCCCCCCCCcc
Q 025845 11 HFVLVHGVNHGAWC--WYKLKARLVAGGHRVTAVDLAASGINMKRI 54 (247)
Q Consensus 11 ~iv~lhG~~~~~~~--~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~ 54 (247)
|+|.+-|.-++... -+.++..|.++||+|.++=.-+||...-..
T Consensus 1 pvv~VvG~~~sGKTTl~~~Li~~l~~~g~~v~~ik~~~~g~~~~d~ 46 (140)
T PF03205_consen 1 PVVQVVGPKNSGKTTLIRKLINELKRRGYRVAVIKHTDHGQFEIDP 46 (140)
T ss_dssp -EEEEEESTTSSHHHHHHHHHHHHHHTT--EEEEEE-STTSTTCST
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHhHcCCceEEEEEccCCCcccCC
Confidence 56777777665544 478889999899999877666676665433
No 304
>PRK10867 signal recognition particle protein; Provisional
Probab=55.66 E-value=1.3e+02 Score=25.50 Aligned_cols=70 Identities=17% Similarity=0.214 Sum_probs=44.3
Q ss_pred HHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCCcEEEEEEehhHHHHHHHHHhCCC--ccceEE
Q 025845 30 ARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGVTLALAADKFPH--KISVAV 107 (247)
Q Consensus 30 ~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~--~v~~lv 107 (247)
......+|.++.+|-+|... .-+...+.+..+.+.. ....+++|--++-|.-+...|..+.+ .+.++|
T Consensus 177 ~~a~~~~~DvVIIDTaGrl~---------~d~~lm~eL~~i~~~v-~p~evllVlda~~gq~av~~a~~F~~~~~i~giI 246 (433)
T PRK10867 177 EEAKENGYDVVIVDTAGRLH---------IDEELMDELKAIKAAV-NPDEILLVVDAMTGQDAVNTAKAFNEALGLTGVI 246 (433)
T ss_pred HHHHhcCCCEEEEeCCCCcc---------cCHHHHHHHHHHHHhh-CCCeEEEEEecccHHHHHHHHHHHHhhCCCCEEE
Confidence 34444679999999998742 2234455566655555 55667777767666666666665443 356777
Q ss_pred EE
Q 025845 108 FV 109 (247)
Q Consensus 108 l~ 109 (247)
+.
T Consensus 247 lT 248 (433)
T PRK10867 247 LT 248 (433)
T ss_pred Ee
Confidence 63
No 305
>KOG0780 consensus Signal recognition particle, subunit Srp54 [Intracellular trafficking, secretion, and vesicular transport]
Probab=55.56 E-value=1.1e+02 Score=25.55 Aligned_cols=61 Identities=18% Similarity=0.190 Sum_probs=35.3
Q ss_pred HHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCCcEEEEEEehhHHHHHHHHHhC
Q 025845 29 KARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGVTLALAADKF 99 (247)
Q Consensus 29 ~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~lvGhS~Gg~ia~~~a~~~ 99 (247)
.+.+.+.+|.+|.+|-.|.- ..-..+-+++.++.+.+ ..+.+++|=-+.=|.-|..-|..+
T Consensus 176 v~~fKke~fdvIIvDTSGRh---------~qe~sLfeEM~~v~~ai-~Pd~vi~VmDasiGQaae~Qa~aF 236 (483)
T KOG0780|consen 176 VDRFKKENFDVIIVDTSGRH---------KQEASLFEEMKQVSKAI-KPDEIIFVMDASIGQAAEAQARAF 236 (483)
T ss_pred HHHHHhcCCcEEEEeCCCch---------hhhHHHHHHHHHHHhhc-CCCeEEEEEeccccHhHHHHHHHH
Confidence 45677778999999977753 23344555556666666 555555554444444444444333
No 306
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=55.42 E-value=54 Score=23.51 Aligned_cols=53 Identities=21% Similarity=0.214 Sum_probs=36.1
Q ss_pred HHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCCcEEEEEEehh
Q 025845 32 LVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLG 88 (247)
Q Consensus 32 l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~lvGhS~G 88 (247)
|.+.|++.+.+|.=.+=-..... .=.+++.+.+.++.+.. +.+++.+|..|.|
T Consensus 36 Lk~~Gik~li~DkDNTL~~~~~~---~i~~~~~~~~~~l~~~~-~~~~v~IvSNsaG 88 (168)
T PF09419_consen 36 LKKKGIKALIFDKDNTLTPPYED---EIPPEYAEWLNELKKQF-GKDRVLIVSNSAG 88 (168)
T ss_pred hhhcCceEEEEcCCCCCCCCCcC---cCCHHHHHHHHHHHHHC-CCCeEEEEECCCC
Confidence 77799999999987653222111 23345666666666666 6678999999985
No 307
>COG0279 GmhA Phosphoheptose isomerase [Carbohydrate transport and metabolism]
Probab=55.42 E-value=21 Score=25.41 Aligned_cols=73 Identities=18% Similarity=0.157 Sum_probs=48.2
Q ss_pred EEEcCCCCChhhHHHHHHHHHhCCcEEEEecCCCCCCCCCcc-----cCccCHHHhHHHHHHHHHhCCCCCcEEEEEEeh
Q 025845 13 VLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRI-----EDVHTFHAYSEPLMEVLASLPAEEKVILVGHSL 87 (247)
Q Consensus 13 v~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~-----~~~~~~~~~~~~l~~~i~~l~~~~~~~lvGhS~ 87 (247)
|++.|.|+++.+-.+++.+|..+ |+--.+-+|.--.|-... ...|.++..-. ..++.+ +..-=+|+|.|-
T Consensus 44 vl~cGNGgSaadAqHfaael~gR-f~~eR~~lpaIaLt~dsS~lTai~NDy~yd~vFs---RqveA~-g~~GDvLigIST 118 (176)
T COG0279 44 VLACGNGGSAADAQHFAAELTGR-FEKERPSLPAIALSTDSSVLTAIANDYGYDEVFS---RQVEAL-GQPGDVLIGIST 118 (176)
T ss_pred EEEECCCcchhhHHHHHHHHhhH-HHhcCCCCCeeEeecccHHHhhhhccccHHHHHH---HHHHhc-CCCCCEEEEEeC
Confidence 67789999999999999988854 777777777665552221 11245554322 334555 555668999999
Q ss_pred hHH
Q 025845 88 GGV 90 (247)
Q Consensus 88 Gg~ 90 (247)
.|.
T Consensus 119 SGN 121 (176)
T COG0279 119 SGN 121 (176)
T ss_pred CCC
Confidence 885
No 308
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=55.29 E-value=0.96 Score=35.03 Aligned_cols=90 Identities=16% Similarity=0.001 Sum_probs=54.0
Q ss_pred CCcEEEEEcCCCCChhhHHHHH-HHHHhCCcEEEEecCCCCCCCCCcccC---ccCHHHhHHHHHHHHHhCCCCCcEEEE
Q 025845 8 EEKHFVLVHGVNHGAWCWYKLK-ARLVAGGHRVTAVDLAASGINMKRIED---VHTFHAYSEPLMEVLASLPAEEKVILV 83 (247)
Q Consensus 8 ~~~~iv~lhG~~~~~~~~~~~~-~~l~~~g~~vi~~D~~G~G~S~~~~~~---~~~~~~~~~~l~~~i~~l~~~~~~~lv 83 (247)
.+..++..||...+......+. ..+...++.++..|+++++.|..+... ..+.......+......+ ...++.++
T Consensus 87 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 165 (299)
T COG1073 87 FGESGGDPRGLADSEGYAEDFSAAVLLLLSEGVLDKDYRLLGASLGPRILAGLSLGGPSAGALLAWGPTRL-DASRIVVW 165 (299)
T ss_pred ccccccccccccCccccccccchhheeeeccccccHHHHHHhhhcCcceEEEEEeeccchHHHhhcchhHH-Hhhcccce
Confidence 3456788888765555443333 344446789999999999999644321 112222222222222122 44588999
Q ss_pred EEehhHHHHHHHHHh
Q 025845 84 GHSLGGVTLALAADK 98 (247)
Q Consensus 84 GhS~Gg~ia~~~a~~ 98 (247)
|.|+||..++.....
T Consensus 166 g~s~g~~~~~~~~~~ 180 (299)
T COG1073 166 GESLGGALALLLLGA 180 (299)
T ss_pred eeccCceeecccccc
Confidence 999999988776654
No 309
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=54.42 E-value=8.6 Score=31.76 Aligned_cols=52 Identities=8% Similarity=-0.186 Sum_probs=34.7
Q ss_pred hhhhccchhHHHHHHHHHHHhhc--------------------------CCcceeeecCCCccccccChhhHHHHHHhh
Q 025845 194 VSYLYLDSDTMQIMLNFIIIIII--------------------------TTHMSELINCSRRAFFLYHNTLFIQFVYVL 246 (247)
Q Consensus 194 l~~g~~D~~~p~~~~~~~~~~~~--------------------------~~~~~~~i~~~gH~~~~e~p~~~~~~v~~~ 246 (247)
+.+|..|.++|..-.+.+. ..+ .+..++.|.+|||....++|+.-.+.+..+
T Consensus 335 iy~Gd~D~i~n~~Gt~~~i-~~L~w~~~~~f~~~~~~~~~~~~G~~k~~~~ltf~~V~~AGHmvP~dqP~~a~~m~~~f 412 (415)
T PF00450_consen 335 IYNGDLDLICNFLGTERWI-DNLNWSGKDGFRQWPRKVNGQVAGYVKQYGNLTFVTVRGAGHMVPQDQPEAALQMFRRF 412 (415)
T ss_dssp EEEETT-SSS-HHHHHHHH-HCTECTEEEEEEEEEEETTCSEEEEEEEETTEEEEEETT--SSHHHHSHHHHHHHHHHH
T ss_pred EeccCCCEEEEeccchhhh-hccccCcccccccccccccccccceeEEeccEEEEEEcCCcccChhhCHHHHHHHHHHH
Confidence 3338999999877766554 322 133478999999999999999988887654
No 310
>PRK14581 hmsF outer membrane N-deacetylase; Provisional
Probab=54.38 E-value=61 Score=29.06 Aligned_cols=79 Identities=14% Similarity=0.080 Sum_probs=50.6
Q ss_pred CCCCcEEEEEcCCCCC----------hhhHHHHHHHHHhCCcEEEEecCCC---CCCCCCccc-----CccCHHHhHHHH
Q 025845 6 GMEEKHFVLVHGVNHG----------AWCWYKLKARLVAGGHRVTAVDLAA---SGINMKRIE-----DVHTFHAYSEPL 67 (247)
Q Consensus 6 ~~~~~~iv~lhG~~~~----------~~~~~~~~~~l~~~g~~vi~~D~~G---~G~S~~~~~-----~~~~~~~~~~~l 67 (247)
..++.+|++-|..... ...|+.+.+.|.+.||++|.+|--= .|...-+.. ....+.+....+
T Consensus 45 ~~~~~~VLmYH~V~d~~~~~~~~~Vspe~Fe~QL~~Lk~nGY~~VSL~el~~~~~g~~~LP~KaV~LTFDDGy~sny~~A 124 (672)
T PRK14581 45 QKNTFVVIAYHDVEDDSADQRYLSVRSSALNEQFVWLRDNGYHVVSVDQILAARNGGPTLPDKAVLLTFDDGYSSFYRRV 124 (672)
T ss_pred CCCceEEEEeCcccCCCCccCccccCHHHHHHHHHHHHHCcCEEecHHHHHHHHhcCCCCCCCeEEEEEEcCCcchHHHH
Confidence 3567899999998542 3469999999999999999987421 122211211 112334466778
Q ss_pred HHHHHhCCCCC-cEEEEEE
Q 025845 68 MEVLASLPAEE-KVILVGH 85 (247)
Q Consensus 68 ~~~i~~l~~~~-~~~lvGh 85 (247)
..+|++. +.. -+.++|.
T Consensus 125 lPILKky-g~pATfFvVg~ 142 (672)
T PRK14581 125 YPLLKAY-KWSAVLAPVGT 142 (672)
T ss_pred HHHHHHc-CCCEEEEEech
Confidence 8889988 554 4445553
No 311
>cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists of eukaryotic and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH
Probab=54.17 E-value=38 Score=26.52 Aligned_cols=82 Identities=18% Similarity=0.203 Sum_probs=48.0
Q ss_pred EEEEcCCCC-ChhhHHHHHHHHHhCCc-------EEEEecCCCCCCCCCcccCccCHHHhH--------HHHHHHHHhCC
Q 025845 12 FVLVHGVNH-GAWCWYKLKARLVAGGH-------RVTAVDLAASGINMKRIEDVHTFHAYS--------EPLMEVLASLP 75 (247)
Q Consensus 12 iv~lhG~~~-~~~~~~~~~~~l~~~g~-------~vi~~D~~G~G~S~~~~~~~~~~~~~~--------~~l~~~i~~l~ 75 (247)
-|++.|.|. ....-+.+...+.+.|. +++.+|..|-=..+..... .....++ .+|.+.++..
T Consensus 27 ~iv~~GAGsAg~gia~ll~~~~~~~G~~~eeA~~~i~~vD~~Gll~~~r~~l~-~~~~~~a~~~~~~~~~~L~e~i~~v- 104 (279)
T cd05312 27 RILFLGAGSAGIGIADLIVSAMVREGLSEEEARKKIWLVDSKGLLTKDRKDLT-PFKKPFARKDEEKEGKSLLEVVKAV- 104 (279)
T ss_pred EEEEECcCHHHHHHHHHHHHHHHHcCCChhhccCeEEEEcCCCeEeCCCCcch-HHHHHHHhhcCcccCCCHHHHHHhc-
Confidence 345556554 44556677777665676 8999999984333222110 1111222 2466666644
Q ss_pred CCCcEEEEEEeh-hHHHHHHHHH
Q 025845 76 AEEKVILVGHSL-GGVTLALAAD 97 (247)
Q Consensus 76 ~~~~~~lvGhS~-Gg~ia~~~a~ 97 (247)
++-+|||-|- ||.+.-+...
T Consensus 105 --~ptvlIG~S~~~g~ft~evv~ 125 (279)
T cd05312 105 --KPTVLIGLSGVGGAFTEEVVR 125 (279)
T ss_pred --CCCEEEEeCCCCCCCCHHHHH
Confidence 5889999995 7776655544
No 312
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=54.17 E-value=56 Score=24.21 Aligned_cols=57 Identities=19% Similarity=0.166 Sum_probs=35.2
Q ss_pred CCcEEEEEcCCCCCh---hhHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHH
Q 025845 8 EEKHFVLVHGVNHGA---WCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLA 72 (247)
Q Consensus 8 ~~~~iv~lhG~~~~~---~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~ 72 (247)
++.||+++||-.... ...+...+.|.+.+.+|-...++|.|.+- ..+..+++.++|+
T Consensus 154 ~~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~i--------~~~~~~~~~~~l~ 213 (216)
T PF02230_consen 154 AKTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHEI--------SPEELRDLREFLE 213 (216)
T ss_dssp CTS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS----------HHHHHHHHHHHH
T ss_pred CCCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCCC--------CHHHHHHHHHHHh
Confidence 357999999987653 33567778888888878888888766543 2344555555554
No 313
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=53.94 E-value=1.1e+02 Score=24.44 Aligned_cols=82 Identities=20% Similarity=0.171 Sum_probs=46.3
Q ss_pred HHHHHHhCCcEEEEecCCCCCCCCCccc--CccCHH--HhHHHHHHHHHhCCCCCcE------EEEEEeh----------
Q 025845 28 LKARLVAGGHRVTAVDLAASGINMKRIE--DVHTFH--AYSEPLMEVLASLPAEEKV------ILVGHSL---------- 87 (247)
Q Consensus 28 ~~~~l~~~g~~vi~~D~~G~G~S~~~~~--~~~~~~--~~~~~l~~~i~~l~~~~~~------~lvGhS~---------- 87 (247)
.+..|.+.||.|+.+|-...|....... ...-.- ...+.+.++++.. +++-+ ..||-|+
T Consensus 16 tv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~~~f~~gDi~D~~~L~~vf~~~-~idaViHFAa~~~VgESv~~Pl~Yy~NN 94 (329)
T COG1087 16 TVRQLLKTGHEVVVLDNLSNGHKIALLKLQFKFYEGDLLDRALLTAVFEEN-KIDAVVHFAASISVGESVQNPLKYYDNN 94 (329)
T ss_pred HHHHHHHCCCeEEEEecCCCCCHHHhhhccCceEEeccccHHHHHHHHHhc-CCCEEEECccccccchhhhCHHHHHhhc
Confidence 3455666899999999887765543221 001111 1223455666665 44333 3567665
Q ss_pred -hHHHHHH-HHHhCCCccceEEEEecc
Q 025845 88 -GGVTLAL-AADKFPHKISVAVFVTAF 112 (247)
Q Consensus 88 -Gg~ia~~-~a~~~p~~v~~lvl~~~~ 112 (247)
+|.+.+. .+.++ .|+++|+.++.
T Consensus 95 v~gTl~Ll~am~~~--gv~~~vFSStA 119 (329)
T COG1087 95 VVGTLNLIEAMLQT--GVKKFIFSSTA 119 (329)
T ss_pred hHhHHHHHHHHHHh--CCCEEEEecch
Confidence 4554443 34344 39999998874
No 314
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=53.94 E-value=68 Score=28.48 Aligned_cols=64 Identities=16% Similarity=0.147 Sum_probs=38.4
Q ss_pred CCCcEEEEEcCCCCCh---hhHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHh
Q 025845 7 MEEKHFVLVHGVNHGA---WCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLAS 73 (247)
Q Consensus 7 ~~~~~iv~lhG~~~~~---~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~ 73 (247)
.-+.|++++||..... ..-..+...|..+|..|-..=+|+-|.+-..+ .......+.+.++++.
T Consensus 549 ~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~~---~~~~~~~~~~~~~~~~ 615 (620)
T COG1506 549 NIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSRP---ENRVKVLKEILDWFKR 615 (620)
T ss_pred ccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCCc---hhHHHHHHHHHHHHHH
Confidence 3467999999986533 34567778888778777666666544333222 2344444455554443
No 315
>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....
Probab=53.88 E-value=32 Score=20.75 Aligned_cols=31 Identities=16% Similarity=0.269 Sum_probs=19.1
Q ss_pred cEEEEEEehhHHHHHHHHHhCCCccceEEEEecc
Q 025845 79 KVILVGHSLGGVTLALAADKFPHKISVAVFVTAF 112 (247)
Q Consensus 79 ~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 112 (247)
++.++| ||.+++++|....+.=..+.++...
T Consensus 1 ~vvViG---gG~ig~E~A~~l~~~g~~vtli~~~ 31 (80)
T PF00070_consen 1 RVVVIG---GGFIGIELAEALAELGKEVTLIERS 31 (80)
T ss_dssp EEEEES---SSHHHHHHHHHHHHTTSEEEEEESS
T ss_pred CEEEEC---cCHHHHHHHHHHHHhCcEEEEEecc
Confidence 356777 6666677666544344567777765
No 316
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=53.05 E-value=7.7 Score=32.21 Aligned_cols=39 Identities=15% Similarity=0.190 Sum_probs=27.4
Q ss_pred HHHHHHhCCCCCcEEEEEEehhHHHHHHHHHhCCCccceE
Q 025845 67 LMEVLASLPAEEKVILVGHSLGGVTLALAADKFPHKISVA 106 (247)
Q Consensus 67 l~~~i~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~l 106 (247)
+.+.+... +..+-+++|.|.|+.+|..++...++.+..+
T Consensus 85 VlkaL~e~-gllp~iI~GtSAGAivaalla~~t~~el~~~ 123 (407)
T cd07232 85 VVKALLDA-DLLPNVISGTSGGSLVAALLCTRTDEELKQL 123 (407)
T ss_pred HHHHHHhC-CCCCCEEEEECHHHHHHHHHHcCCHHHHHHH
Confidence 33333334 5667789999999999999998655555444
No 317
>PRK13256 thiopurine S-methyltransferase; Reviewed
Probab=53.05 E-value=18 Score=27.32 Aligned_cols=29 Identities=14% Similarity=0.187 Sum_probs=20.9
Q ss_pred EEEEcCCCCChhhHHHHHHHHHhCCcEEEEecCC
Q 025845 12 FVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLA 45 (247)
Q Consensus 12 iv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D~~ 45 (247)
=||++|=|-+.+. ..|+++||+|+.+|+-
T Consensus 46 rvLvPgCGkg~D~-----~~LA~~G~~V~GvDlS 74 (226)
T PRK13256 46 VCLIPMCGCSIDM-----LFFLSKGVKVIGIELS 74 (226)
T ss_pred eEEEeCCCChHHH-----HHHHhCCCcEEEEecC
Confidence 5677775555444 4677799999999974
No 318
>PF02590 SPOUT_MTase: Predicted SPOUT methyltransferase; InterPro: IPR003742 This family of proteins are predicted to be SPOUT methyltransferases []. ; GO: 0008168 methyltransferase activity, 0006364 rRNA processing, 0005737 cytoplasm; PDB: 1VH0_E 4FAK_A 1TO0_G 1O6D_A 1NS5_B.
Probab=52.68 E-value=26 Score=24.76 Aligned_cols=45 Identities=13% Similarity=0.139 Sum_probs=29.9
Q ss_pred CCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCCcEEEEEEehhH
Q 025845 35 GGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGG 89 (247)
Q Consensus 35 ~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~lvGhS~Gg 89 (247)
.+-.+|+.|-.|- ..+-+++|+.+.+....- ..+-+.+||-|.|=
T Consensus 66 ~~~~~i~Ld~~Gk---------~~sS~~fA~~l~~~~~~g-~~~i~F~IGG~~G~ 110 (155)
T PF02590_consen 66 PNDYVILLDERGK---------QLSSEEFAKKLERWMNQG-KSDIVFIIGGADGL 110 (155)
T ss_dssp TTSEEEEE-TTSE---------E--HHHHHHHHHHHHHTT-S-EEEEEE-BTTB-
T ss_pred CCCEEEEEcCCCc---------cCChHHHHHHHHHHHhcC-CceEEEEEecCCCC
Confidence 4578899998765 367888999888877754 44567788988883
No 319
>TIGR02069 cyanophycinase cyanophycinase. This model describes both cytosolic and extracellular cyanophycinases. The former are part of a system in many Cyanobacteria and a few other species of generating and later utilizing a storage polymer for nitrogen, carbon, and energy, called cyanophycin. The latter are found in species such as Pseudomonas anguilliseptica that can use external cyanophycin. The polymer has a backbone of L-aspartic acid, with most Asp side chain carboxyl groups attached to L-arginine.
Probab=52.00 E-value=1.1e+02 Score=23.61 Aligned_cols=39 Identities=13% Similarity=0.117 Sum_probs=27.4
Q ss_pred CCCcEEEEEcCCCCChh-hHHHHHHHHHhCCc-EEEEecCC
Q 025845 7 MEEKHFVLVHGVNHGAW-CWYKLKARLVAGGH-RVTAVDLA 45 (247)
Q Consensus 7 ~~~~~iv~lhG~~~~~~-~~~~~~~~l~~~g~-~vi~~D~~ 45 (247)
+..+.|+|++-..+... .++...+.|.+.|+ .|-.+|.+
T Consensus 26 ~~~~rI~~iptAS~~~~~~~~~~~~~~~~lG~~~v~~l~i~ 66 (250)
T TIGR02069 26 GEDAIIVIITSASEEPREVGERYITIFSRLGVKEVKILDVR 66 (250)
T ss_pred CCCceEEEEeCCCCChHHHHHHHHHHHHHcCCceeEEEecC
Confidence 45578999998776553 46677778887787 45666664
No 320
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=51.34 E-value=47 Score=22.97 Aligned_cols=32 Identities=22% Similarity=0.261 Sum_probs=22.0
Q ss_pred cCCCCChhhHHHHHHHHHhCCcEEEEecCCCC
Q 025845 16 HGVNHGAWCWYKLKARLVAGGHRVTAVDLAAS 47 (247)
Q Consensus 16 hG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~ 47 (247)
++.||.......++..|.++|++|..+-...-
T Consensus 9 ~~~GG~e~~~~~l~~~l~~~G~~v~v~~~~~~ 40 (177)
T PF13439_consen 9 PNIGGAERVVLNLARALAKRGHEVTVVSPGVK 40 (177)
T ss_dssp TSSSHHHHHHHHHHHHHHHTT-EEEEEESS-T
T ss_pred CCCChHHHHHHHHHHHHHHCCCEEEEEEcCCC
Confidence 34455556678999999999999888854433
No 321
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=51.32 E-value=32 Score=25.90 Aligned_cols=38 Identities=21% Similarity=0.178 Sum_probs=27.6
Q ss_pred CCCcEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEecCC
Q 025845 7 MEEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLA 45 (247)
Q Consensus 7 ~~~~~iv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D~~ 45 (247)
++.|+.|++-| +++...=..++.+|.+.||.|++--.+
T Consensus 4 ~~~~k~VlItg-cs~GGIG~ala~ef~~~G~~V~AtaR~ 41 (289)
T KOG1209|consen 4 QSQPKKVLITG-CSSGGIGYALAKEFARNGYLVYATARR 41 (289)
T ss_pred ccCCCeEEEee-cCCcchhHHHHHHHHhCCeEEEEEccc
Confidence 45677788877 344445566788899899999997654
No 322
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=50.78 E-value=18 Score=29.82 Aligned_cols=34 Identities=18% Similarity=0.126 Sum_probs=25.1
Q ss_pred HHHhCCCCCcEEEEEEehhHHHHHHHHHhCCCccc
Q 025845 70 VLASLPAEEKVILVGHSLGGVTLALAADKFPHKIS 104 (247)
Q Consensus 70 ~i~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~ 104 (247)
.+... +..+-++.|-|.|+.+|..+|...++.+.
T Consensus 104 aL~e~-gl~p~~i~GtS~Gaivaa~~a~~~~~e~~ 137 (391)
T cd07229 104 ALWLR-GLLPRIITGTATGALIAALVGVHTDEELL 137 (391)
T ss_pred HHHHc-CCCCceEEEecHHHHHHHHHHcCCHHHHH
Confidence 33444 66777899999999999999985544433
No 323
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=50.72 E-value=1.1e+02 Score=24.51 Aligned_cols=35 Identities=17% Similarity=0.117 Sum_probs=26.2
Q ss_pred EEEEcCCCCChhhHHHHHHHHHhCCcEEEEecCCC
Q 025845 12 FVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAA 46 (247)
Q Consensus 12 iv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G 46 (247)
++...|.++....+..++..|.++||.|..+-.++
T Consensus 5 ~i~~~g~gG~~~~~~~la~~L~~~g~ev~vv~~~~ 39 (357)
T PRK00726 5 LLAGGGTGGHVFPALALAEELKKRGWEVLYLGTAR 39 (357)
T ss_pred EEEcCcchHhhhHHHHHHHHHHhCCCEEEEEECCC
Confidence 44446777777777899999998899988875443
No 324
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=50.52 E-value=1.4e+02 Score=24.55 Aligned_cols=37 Identities=24% Similarity=0.296 Sum_probs=26.0
Q ss_pred HhCCCCCcEEEEEEe-hhHHHHHHHHHhCCCccceEEEEecc
Q 025845 72 ASLPAEEKVILVGHS-LGGVTLALAADKFPHKISVAVFVTAF 112 (247)
Q Consensus 72 ~~l~~~~~~~lvGhS-~Gg~ia~~~a~~~p~~v~~lvl~~~~ 112 (247)
..+ ...++.++|-. .|+.++..++.. -|..+++++.-
T Consensus 131 ~~l-~~~~VlvvG~GG~Gs~ia~~La~~---Gvg~i~lvD~d 168 (376)
T PRK08762 131 RRL-LEARVLLIGAGGLGSPAALYLAAA---GVGTLGIVDHD 168 (376)
T ss_pred HHH-hcCcEEEECCCHHHHHHHHHHHHc---CCCeEEEEeCC
Confidence 345 56799999875 566666666643 37889998873
No 325
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=50.47 E-value=49 Score=24.80 Aligned_cols=38 Identities=16% Similarity=0.171 Sum_probs=27.6
Q ss_pred CCcEEEEEcCCCCChhh---HHHHHHHHHhCCcEEEEecCC
Q 025845 8 EEKHFVLVHGVNHGAWC---WYKLKARLVAGGHRVTAVDLA 45 (247)
Q Consensus 8 ~~~~iv~lhG~~~~~~~---~~~~~~~l~~~g~~vi~~D~~ 45 (247)
.++.|.|++-.+.+... -+.....|.+.|..+...++-
T Consensus 31 ~~~~i~FIPtAs~~~~~~~Yv~k~~~~l~~lg~~v~~L~l~ 71 (224)
T COG3340 31 KRKTIAFIPTASVDSEDDFYVEKVRNALAKLGLEVSELHLS 71 (224)
T ss_pred CCceEEEEecCccccchHHHHHHHHHHHHHcCCeeeeeecc
Confidence 36789999988776554 356677888788888777753
No 326
>PLN02924 thymidylate kinase
Probab=50.39 E-value=59 Score=24.46 Aligned_cols=46 Identities=17% Similarity=0.180 Sum_probs=33.3
Q ss_pred CCcCCCCCC-cEEEEEcCCCCChh--hHHHHHHHHHhCCcEEEEecCCC
Q 025845 1 MEEVVGMEE-KHFVLVHGVNHGAW--CWYKLKARLVAGGHRVTAVDLAA 46 (247)
Q Consensus 1 ~~~~~~~~~-~~iv~lhG~~~~~~--~~~~~~~~l~~~g~~vi~~D~~G 46 (247)
||...++++ ..+|.+=|.-|+.. .-+.+.+.|..+|+.|+....|+
T Consensus 6 ~~~~~~~~~~g~~IviEGiDGsGKsTq~~~L~~~l~~~g~~v~~~~ep~ 54 (220)
T PLN02924 6 METESSVESRGALIVLEGLDRSGKSTQCAKLVSFLKGLGVAAELWRFPD 54 (220)
T ss_pred cCCCCCcCCCCeEEEEECCCCCCHHHHHHHHHHHHHhcCCCceeeeCCC
Confidence 566555544 46788888866544 46888899988899998887775
No 327
>PRK11889 flhF flagellar biosynthesis regulator FlhF; Provisional
Probab=49.79 E-value=1.6e+02 Score=24.84 Aligned_cols=79 Identities=13% Similarity=0.120 Sum_probs=50.8
Q ss_pred ChhhHHHHHHHHHh-CCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCCcEEEEE-EehhHHHHHHHHHh
Q 025845 21 GAWCWYKLKARLVA-GGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVG-HSLGGVTLALAADK 98 (247)
Q Consensus 21 ~~~~~~~~~~~l~~-~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~lvG-hS~Gg~ia~~~a~~ 98 (247)
+...+...+..+.+ .++.++.+|-+|.-. .-....+.+.++++.. ....++||- -++++.-....+..
T Consensus 304 d~~~L~~aL~~lk~~~~~DvVLIDTaGRs~---------kd~~lm~EL~~~lk~~-~PdevlLVLsATtk~~d~~~i~~~ 373 (436)
T PRK11889 304 DEAAMTRALTYFKEEARVDYILIDTAGKNY---------RASETVEEMIETMGQV-EPDYICLTLSASMKSKDMIEIITN 373 (436)
T ss_pred CHHHHHHHHHHHHhccCCCEEEEeCccccC---------cCHHHHHHHHHHHhhc-CCCeEEEEECCccChHHHHHHHHH
Confidence 44555555666653 369999999998732 2244566667777766 455666663 34676666777766
Q ss_pred CCC-ccceEEEE
Q 025845 99 FPH-KISVAVFV 109 (247)
Q Consensus 99 ~p~-~v~~lvl~ 109 (247)
+.. .+.++|+.
T Consensus 374 F~~~~idglI~T 385 (436)
T PRK11889 374 FKDIHIDGIVFT 385 (436)
T ss_pred hcCCCCCEEEEE
Confidence 543 57888874
No 328
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=49.66 E-value=11 Score=29.95 Aligned_cols=33 Identities=18% Similarity=0.289 Sum_probs=23.6
Q ss_pred HHHHHHHhCCCCCcEEEEEEehhHHHHHHHHHhC
Q 025845 66 PLMEVLASLPAEEKVILVGHSLGGVTLALAADKF 99 (247)
Q Consensus 66 ~l~~~i~~l~~~~~~~lvGhS~Gg~ia~~~a~~~ 99 (247)
-+.+.+... +..+-++.|-|.|+.+|..++...
T Consensus 85 GVlkaL~e~-gl~p~~i~GsSaGAivaa~~~~~t 117 (323)
T cd07231 85 GVVRTLVEH-QLLPRVIAGSSVGSIVCAIIATRT 117 (323)
T ss_pred HHHHHHHHc-CCCCCEEEEECHHHHHHHHHHcCC
Confidence 333444444 566778999999999999888643
No 329
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=49.13 E-value=15 Score=30.96 Aligned_cols=19 Identities=21% Similarity=0.284 Sum_probs=15.6
Q ss_pred cCCCCCCcEEEEEcCCCCC
Q 025845 3 EVVGMEEKHFVLVHGVNHG 21 (247)
Q Consensus 3 ~~~~~~~~~iv~lhG~~~~ 21 (247)
..++++..||||++|.++|
T Consensus 13 ~~~~~~~~PViLvPG~~gS 31 (440)
T PLN02733 13 PYVDPDLDPVLLVPGIGGS 31 (440)
T ss_pred CCCCCCCCcEEEeCCCCcc
Confidence 3567788999999999865
No 330
>COG4850 Uncharacterized conserved protein [Function unknown]
Probab=48.99 E-value=73 Score=25.61 Aligned_cols=98 Identities=16% Similarity=0.087 Sum_probs=55.9
Q ss_pred EEEEEcCCCCChhhHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCCcEEEEEEehhH-
Q 025845 11 HFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGG- 89 (247)
Q Consensus 11 ~iv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~lvGhS~Gg- 89 (247)
|++++-- +-...|..+-+.+..+++.-.-.=++-+|......- ...-..-...+..++..+ ...+++|||-|-==
T Consensus 215 pvfYvSn--SPw~~f~~L~efi~~~~~P~GPl~L~~~g~~~~~i~-~sga~rK~~~l~nil~~~-p~~kfvLVGDsGE~D 290 (373)
T COG4850 215 PVFYVSN--SPWQLFPTLQEFITNRNFPYGPLLLRRWGGVLDNII-ESGAARKGQSLRNILRRY-PDRKFVLVGDSGEHD 290 (373)
T ss_pred CeEEecC--ChhHhHHHHHHHHhcCCCCCCchhHhhcCCcccccc-cchhhhcccHHHHHHHhC-CCceEEEecCCCCcC
Confidence 5555532 223456777777765555433333333342211110 012223334566678888 78999999977322
Q ss_pred -HHHHHHHHhCCCccceEEEEecc
Q 025845 90 -VTLALAADKFPHKISVAVFVTAF 112 (247)
Q Consensus 90 -~ia~~~a~~~p~~v~~lvl~~~~ 112 (247)
.+=.+++.++|+||.++-+=+..
T Consensus 291 peIYae~v~~fP~RIl~I~IRdvs 314 (373)
T COG4850 291 PEIYAEMVRCFPNRILGIYIRDVS 314 (373)
T ss_pred HHHHHHHHHhCccceeeEeeeecc
Confidence 24455677899999998876664
No 331
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=48.52 E-value=36 Score=25.85 Aligned_cols=22 Identities=27% Similarity=0.347 Sum_probs=18.6
Q ss_pred cEEEEEEehhHHHHHHHHHhCC
Q 025845 79 KVILVGHSLGGVTLALAADKFP 100 (247)
Q Consensus 79 ~~~lvGhS~Gg~ia~~~a~~~p 100 (247)
.-.++|-|.|+.++..++...+
T Consensus 30 ~~~i~G~SAGAl~aa~~asg~~ 51 (233)
T cd07224 30 TTPLAGASAGSLAAACSASGLS 51 (233)
T ss_pred CCEEEEEcHHHHHHHHHHcCCC
Confidence 4479999999999999987654
No 332
>PRK00091 miaA tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed
Probab=48.41 E-value=97 Score=24.76 Aligned_cols=73 Identities=14% Similarity=0.216 Sum_probs=40.0
Q ss_pred CcEEEEEcCCCCChhhHHHHHHHHHh-CCcEEEEecCCC------CC----------------CCCCcccCccCHHHhHH
Q 025845 9 EKHFVLVHGVNHGAWCWYKLKARLVA-GGHRVTAVDLAA------SG----------------INMKRIEDVHTFHAYSE 65 (247)
Q Consensus 9 ~~~iv~lhG~~~~~~~~~~~~~~l~~-~g~~vi~~D~~G------~G----------------~S~~~~~~~~~~~~~~~ 65 (247)
.+.++++-|-.++... .++..|++ .+..+|..|-.- .| .+.......++..++.+
T Consensus 3 ~~~~i~i~GptgsGKt--~la~~la~~~~~~iis~Ds~Qvy~~l~i~Takp~~~E~~gv~hhlid~~~~~~~~s~~~f~~ 80 (307)
T PRK00091 3 KPKVIVIVGPTASGKT--ALAIELAKRLNGEIISADSMQVYRGMDIGTAKPTAEERAGVPHHLIDILDPTESYSVADFQR 80 (307)
T ss_pred CceEEEEECCCCcCHH--HHHHHHHHhCCCcEEeccccceeecccccCCCCCHHHHcCccEEeecccChhhcccHHHHHH
Confidence 4567888888776554 22233333 245677666521 11 11111123468888888
Q ss_pred HHHHHHHhC-CCCCcEEEE
Q 025845 66 PLMEVLASL-PAEEKVILV 83 (247)
Q Consensus 66 ~l~~~i~~l-~~~~~~~lv 83 (247)
+..+.++.. ...+.++|+
T Consensus 81 ~a~~~i~~i~~~gk~pIlv 99 (307)
T PRK00091 81 DALAAIADILARGKLPILV 99 (307)
T ss_pred HHHHHHHHHHhCCCCEEEE
Confidence 888888765 233455666
No 333
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=47.81 E-value=1.3e+02 Score=23.27 Aligned_cols=41 Identities=10% Similarity=-0.006 Sum_probs=33.0
Q ss_pred CCCcEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEecCCCC
Q 025845 7 MEEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAAS 47 (247)
Q Consensus 7 ~~~~~iv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~ 47 (247)
..+.||++=-|...+.+.|...++.+.+.|..=+.+=.||.
T Consensus 120 ~tgkPVilk~G~~~t~~e~~~A~e~i~~~Gn~~i~L~eRg~ 160 (250)
T PRK13397 120 HIDKPILFKRGLMATIEEYLGALSYLQDTGKSNIILCERGV 160 (250)
T ss_pred ccCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCeEEEEcccc
Confidence 45789999999999999999999999887774444444665
No 334
>PRK06849 hypothetical protein; Provisional
Probab=47.60 E-value=1.1e+02 Score=25.10 Aligned_cols=61 Identities=13% Similarity=0.095 Sum_probs=39.6
Q ss_pred hHHHHHHHHHhCCcEEEEecCCCCCCCCC---cc------cCccCHHHhHHHHHHHHHhCCCCCcEEEEEEe
Q 025845 24 CWYKLKARLVAGGHRVTAVDLAASGINMK---RI------EDVHTFHAYSEPLMEVLASLPAEEKVILVGHS 86 (247)
Q Consensus 24 ~~~~~~~~l~~~g~~vi~~D~~G~G~S~~---~~------~~~~~~~~~~~~l~~~i~~l~~~~~~~lvGhS 86 (247)
.-..++..|.+.|++|++.|......+.. .. ....+.+.+.+.+.++++.. +. ++++-+.+
T Consensus 16 ~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s~~~d~~~~~p~p~~d~~~~~~~L~~i~~~~-~i-d~vIP~~e 85 (389)
T PRK06849 16 AALELARLFHNAGHTVILADSLKYPLSRFSRAVDGFYTIPSPRWDPDAYIQALLSIVQRE-NI-DLLIPTCE 85 (389)
T ss_pred HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHhhhheEEeCCCCCCHHHHHHHHHHHHHHc-CC-CEEEECCh
Confidence 44567788888999999999875433210 00 01235677889999998887 43 45555554
No 335
>PF08433 KTI12: Chromatin associated protein KTI12 ; InterPro: IPR013641 This is a family of chromatin associated proteins which interact with the Elongator complex, a component of the elongating form of RNA polymerase II []. The Elongator complex has histone acetyltransferase activity. ; PDB: 3ADB_B 3ADC_B 3A4M_B 3A4N_B 3AM1_A 3A4L_B 3ADD_A.
Probab=47.52 E-value=50 Score=25.76 Aligned_cols=38 Identities=18% Similarity=0.239 Sum_probs=23.9
Q ss_pred EEEEEcCCCCChhh--HHHHHHHHHhCCcEEEEecCCCCC
Q 025845 11 HFVLVHGVNHGAWC--WYKLKARLVAGGHRVTAVDLAASG 48 (247)
Q Consensus 11 ~iv~lhG~~~~~~~--~~~~~~~l~~~g~~vi~~D~~G~G 48 (247)
|+|++-|++++... ...+.+.|.+.++.|+.++--..+
T Consensus 2 pLiil~G~P~SGKTt~a~~L~~~~~~~~~~v~~i~~~~~~ 41 (270)
T PF08433_consen 2 PLIILCGLPCSGKTTRAKELKKYLEEKGKEVVIISDDSLG 41 (270)
T ss_dssp -EEEEE--TTSSHHHHHHHHHHHHHHTT--EEEE-THHHH
T ss_pred EEEEEEcCCCCcHHHHHHHHHHHHHhcCCEEEEEcccccc
Confidence 78999999988765 467777888788999888854444
No 336
>PF01656 CbiA: CobQ/CobB/MinD/ParA nucleotide binding domain; InterPro: IPR002586 This entry consists of various cobyrinic acid a,c-diamide synthases. These include CbiA and CbiP from Salmonella typhimurium []., and CobQ from Rhodobacter capsulatus []. These amidases catalyse amidations to various side chains of hydrogenobyrinic acid or cobyrinic acid a,c-diamide in the biosynthesis of cobalamin (vitamin B12) from uroporphyrinogen III. Vitamin B12 is an important cofactor and an essential nutrient for many plants and animals and is primarily produced by bacteria [].; PDB: 3K9G_A 3K9H_B 3EZ9_B 3EZF_A 3EZ2_B 3EZ6_A 3EZ7_A 1G3Q_A 1G3R_A 1DTS_A ....
Probab=47.36 E-value=38 Score=24.36 Aligned_cols=34 Identities=21% Similarity=0.221 Sum_probs=23.7
Q ss_pred EEEEcCCCCChhh--HHHHHHHHHhCCcEEEEecCC
Q 025845 12 FVLVHGVNHGAWC--WYKLKARLVAGGHRVTAVDLA 45 (247)
Q Consensus 12 iv~lhG~~~~~~~--~~~~~~~l~~~g~~vi~~D~~ 45 (247)
|.+.++-||.... -..++..|+++|++|+.+|.=
T Consensus 1 I~v~~~kGG~GKTt~a~~la~~la~~g~~VlliD~D 36 (195)
T PF01656_consen 1 IAVTSGKGGVGKTTIAANLAQALARKGKKVLLIDLD 36 (195)
T ss_dssp EEEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEEES
T ss_pred CEEEcCCCCccHHHHHHHHHhccccccccccccccC
Confidence 3455555665544 357888888899999999983
No 337
>TIGR00689 rpiB_lacA_lacB sugar-phosphate isomerases, RpiB/LacA/LacB family. Proteins of known function in this family act as sugar (pentose and/or hexose)-phosphate isomerases, including the LacA and LacB subunits of galactose-6-phosphate isomerases from Gram-positive bacteria and RpiB. RpiB is the second ribose phosphate isomerase of E. coli. It lacks homology to RpiA, its inducer is unknown (but is not ribose), and it can be replaced by the homologous galactose-6-phosphate isomerase of Streptococcus mutans, all of which suggests that the ribose phosphate isomerase activity of RpiB is a secondary function. On the other hand, there appear to be a significant number of species which contain rpiB, lack rpiA and seem to require rpi activity in order to copplete the pentose phosphate pathway.
Probab=46.85 E-value=98 Score=21.59 Aligned_cols=65 Identities=15% Similarity=0.279 Sum_probs=39.0
Q ss_pred HHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCCcEEEEEEehhHHHHHHHHHhCCC
Q 025845 26 YKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGVTLALAADKFPH 101 (247)
Q Consensus 26 ~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~ 101 (247)
+.+.+.|.+.||.|+-+- . .+. +..++.+++..+.+.+..-....-+.++|...|-.++ |.++|.
T Consensus 14 ~~l~~~L~~~g~eV~D~G---~--~~~---~~~dYpd~a~~va~~V~~g~~~~GIliCGtGiG~sia---ANK~~G 78 (144)
T TIGR00689 14 SEIIEHLKQKGHEVIDCG---T--LYD---ERVDYPDYAKLVADKVVAGEVSLGILICGTGIGMSIA---ANKFKG 78 (144)
T ss_pred HHHHHHHHHCCCEEEEcC---C--CCC---CCCChHHHHHHHHHHHHcCCCceEEEEcCCcHHHHHH---HhcCCC
Confidence 467788988999885442 1 111 1257899999999888655222344455555554332 445654
No 338
>TIGR01118 lacA galactose-6-phosphate isomerase, LacA subunit. This family contains members from low GC gram-positive bacteria. Galactose-6-phosphate isomerase is involved in lactose catabolism by the tagatose-6-phosphate pathway.
Probab=46.75 E-value=97 Score=21.53 Aligned_cols=55 Identities=18% Similarity=0.214 Sum_probs=34.8
Q ss_pred HHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCCcEEEEEEehhHH
Q 025845 26 YKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGV 90 (247)
Q Consensus 26 ~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~lvGhS~Gg~ 90 (247)
+.+.+.|.++||.|+-+ |.+ +..++.+++..+.+.+..-....-+.++|.-.|-.
T Consensus 16 ~~i~~~L~~~G~eV~D~---G~~-------~~~dYpd~a~~va~~V~~~e~~~GIliCGtGiG~s 70 (141)
T TIGR01118 16 DVIKNFLVDNGFEVIDV---TEG-------DGQDFVDVTLAVASEVQKDEQNLGIVIDAYGAGSF 70 (141)
T ss_pred HHHHHHHHHCCCEEEEc---CCC-------CCCCcHHHHHHHHHHHHcCCCceEEEEcCCCHhHh
Confidence 46778888899998544 221 12578889999888776542334455556555543
No 339
>PRK06029 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Provisional
Probab=46.73 E-value=1.1e+02 Score=22.30 Aligned_cols=61 Identities=13% Similarity=0.025 Sum_probs=37.0
Q ss_pred CcEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHH-HHHHhCCCC
Q 025845 9 EKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLM-EVLASLPAE 77 (247)
Q Consensus 9 ~~~iv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~-~~i~~l~~~ 77 (247)
+.|+++++--.-....-......|.+.|+.|+-+.. |+-. .+.+++++++.+. .+++.+ ++
T Consensus 115 ~~pvii~P~~M~~~p~~~~Nl~~L~~~G~~vi~P~~-g~~a------~p~~~~~~~~~~v~~~~~~l-~~ 176 (185)
T PRK06029 115 RRRLVLCVRETPLHLGHLRNMTKLAEMGAIIMPPVP-AFYH------RPQTLEDMVDQTVGRVLDLF-GI 176 (185)
T ss_pred CCCEEEEeccccCCHHHHHHHHHHHHCcCEEECCCc-cccc------CCCCHHHHHHHHHHHHHHhc-CC
Confidence 456666663221222224556677878888887663 4321 1258899988887 577877 54
No 340
>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase. The member of this family from Synechocystis PCC 6803, CcmA, was shown to be essential for carboxysome formation. However, no other candidate for this enzyme is present in that species, chorismate biosynthesis does occur, other species having this protein lack carboxysomes but appear to make chorismate, and a requirement of CcmA for carboxysome formation does not prohibit a role in chorismate biosynthesis.
Probab=46.28 E-value=1.4e+02 Score=23.20 Aligned_cols=73 Identities=14% Similarity=0.233 Sum_probs=45.1
Q ss_pred CCCcEEEEEcCCCCChhhHHHHHHHHHhCCc-EEEEecCCCCCCCCC-cc-cCccCHHHhHHHHHHHHHhCCCCCcEEE-
Q 025845 7 MEEKHFVLVHGVNHGAWCWYKLKARLVAGGH-RVTAVDLAASGINMK-RI-EDVHTFHAYSEPLMEVLASLPAEEKVIL- 82 (247)
Q Consensus 7 ~~~~~iv~lhG~~~~~~~~~~~~~~l~~~g~-~vi~~D~~G~G~S~~-~~-~~~~~~~~~~~~l~~~i~~l~~~~~~~l- 82 (247)
..+.||++--|..++.+.|...++.+...|. +++... +| .|.- +. ....++. .+..+-+.. + -++.+
T Consensus 130 ~~gkPVilk~G~~~t~~e~~~Ave~i~~~Gn~~i~l~~-rG--~s~y~~~~~~~~dl~----~i~~lk~~~-~-~pV~~d 200 (260)
T TIGR01361 130 KQGKPVLLKRGMGNTIEEWLYAAEYILSSGNGNVILCE-RG--IRTFEKATRNTLDLS----AVPVLKKET-H-LPIIVD 200 (260)
T ss_pred cCCCcEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEE-CC--CCCCCCCCcCCcCHH----HHHHHHHhh-C-CCEEEc
Confidence 4577999999999999999999999987776 455543 33 3332 11 1112222 222222222 2 37777
Q ss_pred EEEehh
Q 025845 83 VGHSLG 88 (247)
Q Consensus 83 vGhS~G 88 (247)
.+||.|
T Consensus 201 s~Hs~G 206 (260)
T TIGR01361 201 PSHAAG 206 (260)
T ss_pred CCCCCC
Confidence 799988
No 341
>PLN02748 tRNA dimethylallyltransferase
Probab=45.83 E-value=1.4e+02 Score=25.60 Aligned_cols=74 Identities=12% Similarity=0.131 Sum_probs=44.1
Q ss_pred CcEEEEEcCCCCChhhHHHHHHHHHh-CCcEEEEecC----CCC------------------CCCCCcccCccCHHHhHH
Q 025845 9 EKHFVLVHGVNHGAWCWYKLKARLVA-GGHRVTAVDL----AAS------------------GINMKRIEDVHTFHAYSE 65 (247)
Q Consensus 9 ~~~iv~lhG~~~~~~~~~~~~~~l~~-~g~~vi~~D~----~G~------------------G~S~~~~~~~~~~~~~~~ 65 (247)
++.+|+|-|-.++...= ++..|++ -+..||..|- +|. ..+--.+...|+..+|.+
T Consensus 21 ~~~~i~i~GptgsGKs~--la~~la~~~~~eii~~DsmQVYrgLdIgTaKpt~eE~~~VpHHLid~v~p~e~ysv~~F~~ 98 (468)
T PLN02748 21 KAKVVVVMGPTGSGKSK--LAVDLASHFPVEIINADSMQVYSGLDVLTNKVPLHEQKGVPHHLLGVISPSVEFTAKDFRD 98 (468)
T ss_pred CCCEEEEECCCCCCHHH--HHHHHHHhcCeeEEcCchheeeCCcchhcCCCCHHHHcCCCCeeEeecCCCCcCcHHHHHH
Confidence 45688888887765542 2223332 2457888882 221 111111224589999999
Q ss_pred HHHHHHHhC-CCCCcEEEEE
Q 025845 66 PLMEVLASL-PAEEKVILVG 84 (247)
Q Consensus 66 ~l~~~i~~l-~~~~~~~lvG 84 (247)
+....|+.+ ...+-.+|||
T Consensus 99 ~A~~~I~~I~~rgk~PIlVG 118 (468)
T PLN02748 99 HAVPLIEEILSRNGLPVIVG 118 (468)
T ss_pred HHHHHHHHHHhcCCCeEEEc
Confidence 999988876 2345677776
No 342
>PRK14479 dihydroxyacetone kinase; Provisional
Probab=45.77 E-value=54 Score=28.74 Aligned_cols=34 Identities=26% Similarity=0.318 Sum_probs=26.4
Q ss_pred CCcEEEEEcCCCCChhh-----HHHHHHHHHhCCcEEEE
Q 025845 8 EEKHFVLVHGVNHGAWC-----WYKLKARLVAGGHRVTA 41 (247)
Q Consensus 8 ~~~~iv~lhG~~~~~~~-----~~~~~~~l~~~g~~vi~ 41 (247)
....+|++.|+++++.. ++.+.+.|.++|..|..
T Consensus 250 ~d~v~~lvN~lG~t~~~El~i~~~~~~~~l~~~~i~v~~ 288 (568)
T PRK14479 250 GERVAVLVNGLGATPYEELFVVYGAVARLLAARGITVVR 288 (568)
T ss_pred CCeEEEEecCCCCCcHHHHHHHHHHHHHHHHHCCCEEEE
Confidence 34689999999998754 67888888877877554
No 343
>PF04244 DPRP: Deoxyribodipyrimidine photo-lyase-related protein; InterPro: IPR007357 This family appears to be related to DNA photolyases.; PDB: 3ZXS_A.
Probab=45.50 E-value=56 Score=24.69 Aligned_cols=49 Identities=16% Similarity=0.316 Sum_probs=28.7
Q ss_pred hHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCCcEEEE
Q 025845 24 CWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILV 83 (247)
Q Consensus 24 ~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~lv 83 (247)
.++.+++.|.++||+|.-+.+.-. .+...+.+.|...++.. +.+.+.++
T Consensus 50 aMRhfa~~L~~~G~~V~Y~~~~~~----------~~~~s~~~~L~~~~~~~-~~~~~~~~ 98 (224)
T PF04244_consen 50 AMRHFADELRAKGFRVHYIELDDP----------ENTQSFEDALARALKQH-GIDRLHVM 98 (224)
T ss_dssp HHHHHHHHHHHTT--EEEE-TT-T----------T--SSHHHHHHHHHHHH-----EEEE
T ss_pred HHHHHHHHHHhCCCEEEEEeCCCc----------cccccHHHHHHHHHHHc-CCCEEEEE
Confidence 467889999999999999986621 23335666777777777 66676665
No 344
>PF02502 LacAB_rpiB: Ribose/Galactose Isomerase; InterPro: IPR003500 This entry represents the sugar isomerase enzymes ribose 5-phosphate isomerase B (rpiB), galactose isomerase subunit A (LacA) and galactose isomerase subunit B (LacB). Galactose-6-phosphate isomerase (5.3.1.26 from EC) is a heteromultimeric protein consisting of subunits LacA and LacB, and catalyses the conversion of D-galactose 6-phosphate to D-tagatose and 6-phosphate in the tagatose 6-phosphate pathway of lactose catabolism []. Galactose-6-phosphate isomerase is induced by galactose or lactose. This entry represents the LacB subunit. Ribose 5-phosphate isomerase (5.3.1.6 from EC) forms a homodimer and catalyses the interconversion of D-ribose 5-phosphate and D-ribulose 5-phosphate in the non-oxidative branch of the pentose phosphate pathway. This reaction permits the synthesis of ribose from other sugars, as well as the recycling of sugars from nucleotide breakdown. Two unrelated enzymes can catalyse this reaction: RpiA (found in most organisms) and RpiB (found in some bacteria and eukaryotes). RpiB is also involved in metabolism of the rare sugar, allose, in addition to ribose sugars. The structures of RpiA and RpiB are distinct, RpiB having a Rossmann-type alpha/beta/alpha sandwich topology [].; GO: 0005975 carbohydrate metabolic process; PDB: 3HEE_A 3HE8_A 3PH3_B 3PH4_B 3ONO_A 4EM8_B 3S5P_B 1O1X_A 2BES_D 2VVP_D ....
Probab=45.07 E-value=1e+02 Score=21.35 Aligned_cols=64 Identities=22% Similarity=0.327 Sum_probs=38.9
Q ss_pred HHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCC-cEEEEEEehhHHHHHHHHHhCCC
Q 025845 26 YKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEE-KVILVGHSLGGVTLALAADKFPH 101 (247)
Q Consensus 26 ~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~-~~~lvGhS~Gg~ia~~~a~~~p~ 101 (247)
+.+.+.|.+.||.|+-+-.-. .. ..++.+++..+...+..- ..+ -+.++|..+|-.+ +|.++|.
T Consensus 15 ~~i~~~L~~~g~eV~D~G~~~-----~~---~~dy~~~a~~va~~V~~~-~~d~GIliCgtGiG~~i---aANK~~G 79 (140)
T PF02502_consen 15 EAIKEYLEEKGYEVIDFGTYS-----ED---SVDYPDFAEKVAEAVASG-EADRGILICGTGIGMSI---AANKVPG 79 (140)
T ss_dssp HHHHHHHHHTTEEEEEESESS-----TS---T--HHHHHHHHHHHHHTT-SSSEEEEEESSSHHHHH---HHHTSTT
T ss_pred HHHHHHHHHCCCEEEEeCCCC-----CC---CCCHHHHHHHHHHHHHcc-cCCeEEEEcCCChhhhh---HhhcCCC
Confidence 467788888899887664321 11 368999999999888765 333 3444455555433 3446664
No 345
>PRK13398 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=44.53 E-value=1.5e+02 Score=23.12 Aligned_cols=96 Identities=13% Similarity=0.087 Sum_probs=55.3
Q ss_pred CCCcEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCCcEEE-EEE
Q 025845 7 MEEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVIL-VGH 85 (247)
Q Consensus 7 ~~~~~iv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~l-vGh 85 (247)
..+.||++=-|..++.+.|...++.+...|..=+.+=.+|. +..+ .|.....--.....++.. -.-++.+ .+|
T Consensus 132 ~~gkPV~lk~G~~~s~~e~~~A~e~i~~~Gn~~i~L~~rG~--~t~~---~Y~~~~vdl~~i~~lk~~-~~~pV~~D~sH 205 (266)
T PRK13398 132 KTKKPILLKRGMSATLEEWLYAAEYIMSEGNENVVLCERGI--RTFE---TYTRNTLDLAAVAVIKEL-SHLPIIVDPSH 205 (266)
T ss_pred cCCCcEEEeCCCCCCHHHHHHHHHHHHhcCCCeEEEEECCC--CCCC---CCCHHHHHHHHHHHHHhc-cCCCEEEeCCC
Confidence 45779999999999999999999999877764344444553 1111 123222222222334333 1246677 699
Q ss_pred ehh-----HHHHHHHHHhCCCccceEEEEec
Q 025845 86 SLG-----GVTLALAADKFPHKISVAVFVTA 111 (247)
Q Consensus 86 S~G-----g~ia~~~a~~~p~~v~~lvl~~~ 111 (247)
|.| ..++.... ... +.++++-.-
T Consensus 206 s~G~~~~v~~~~~aAv-a~G--a~Gl~iE~H 233 (266)
T PRK13398 206 ATGRRELVIPMAKAAI-AAG--ADGLMIEVH 233 (266)
T ss_pred cccchhhHHHHHHHHH-HcC--CCEEEEecc
Confidence 998 33333322 222 566776543
No 346
>TIGR02883 spore_cwlD N-acetylmuramoyl-L-alanine amidase CwlD. Members of this protein family are the CwlD family of N-acetylmuramoyl-L-alanine amidase. This family has been called the germination-specific N-acetylmuramoyl-L-alanine amidase. CwlD is required, along with the putative deactylase PdaA, to make muramic delta-lactam, a novel peptidoglycan constituent found only in spores. CwlD mutants show a germination defect.
Probab=43.86 E-value=42 Score=24.45 Aligned_cols=36 Identities=11% Similarity=0.024 Sum_probs=20.0
Q ss_pred EEEEecCCCCCCCCCcccCc--cCHH----HhHHHHHHHHHhC
Q 025845 38 RVTAVDLAASGINMKRIEDV--HTFH----AYSEPLMEVLASL 74 (247)
Q Consensus 38 ~vi~~D~~G~G~S~~~~~~~--~~~~----~~~~~l~~~i~~l 74 (247)
++|++| ||||.+++-.... ..-. +++..+.+.|++.
T Consensus 1 k~I~iD-pGHGg~d~GA~~~~g~~E~~~~l~ia~~l~~~L~~~ 42 (189)
T TIGR02883 1 KIIVID-PGHGGIDGGAVGKDGTLEKDITLEIALKLKDYLQEQ 42 (189)
T ss_pred CEEEEe-CCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHhC
Confidence 368888 9999876433221 2222 3445555555554
No 347
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=43.79 E-value=46 Score=25.45 Aligned_cols=21 Identities=19% Similarity=0.218 Sum_probs=18.1
Q ss_pred EEEEEEehhHHHHHHHHHhCC
Q 025845 80 VILVGHSLGGVTLALAADKFP 100 (247)
Q Consensus 80 ~~lvGhS~Gg~ia~~~a~~~p 100 (247)
-.++|-|.|+.++..++...+
T Consensus 33 ~~i~GtSAGAl~aa~~a~g~~ 53 (243)
T cd07204 33 RRIAGASAGAIVAAVVLCGVS 53 (243)
T ss_pred CEEEEEcHHHHHHHHHHhCCC
Confidence 389999999999999988654
No 348
>PRK00103 rRNA large subunit methyltransferase; Provisional
Probab=43.64 E-value=94 Score=22.01 Aligned_cols=44 Identities=18% Similarity=0.206 Sum_probs=27.2
Q ss_pred CcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCCcEEEEEEehhH
Q 025845 36 GHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGG 89 (247)
Q Consensus 36 g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~lvGhS~Gg 89 (247)
+-.+|+.|-+|- ..+-.++|+.+.+....- ..+-+.+||-+.|=
T Consensus 67 ~~~~i~LDe~Gk---------~~sS~~fA~~l~~~~~~g-~~~i~F~IGGa~G~ 110 (157)
T PRK00103 67 GARVIALDERGK---------QLSSEEFAQELERWRDDG-RSDVAFVIGGADGL 110 (157)
T ss_pred CCEEEEEcCCCC---------cCCHHHHHHHHHHHHhcC-CccEEEEEcCcccc
Confidence 345788887765 356677777777664432 23556677766664
No 349
>TIGR03709 PPK2_rel_1 polyphosphate:nucleotide phosphotransferase, PPK2 family. Members of this protein family belong to the polyphosphate kinase 2 (PPK2) family, which is not related in sequence to PPK1. While PPK1 tends to act in the biosynthesis of polyphosphate, or poly(P), members of the PPK2 family tend to use the terminal phosphate of poly(P) to regenerate ATP or GTP from the corresponding nucleoside diphosphate, or ADP from AMP as is the case with polyphosphate:AMP phosphotransferase (PAP). Members of this protein family most likely transfer the terminal phosphate between poly(P) and some nucleotide, but it is not clear which.
Probab=43.56 E-value=1.1e+02 Score=23.94 Aligned_cols=71 Identities=10% Similarity=0.105 Sum_probs=47.8
Q ss_pred CCcEEEEEcCCCCCh--hhHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCCcEEEEEE
Q 025845 8 EEKHFVLVHGVNHGA--WCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGH 85 (247)
Q Consensus 8 ~~~~iv~lhG~~~~~--~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~lvGh 85 (247)
..|.||++.|+-++. ..-+.+...|.-+|++|.++.-| ...+..-.-+-.+-.+++....+.++=-
T Consensus 54 ~~~vlIv~eG~DaAGKG~~I~~l~~~lDPRg~~V~s~~~P------------t~eE~~~p~lWRfw~~lP~~G~i~IF~R 121 (264)
T TIGR03709 54 RRSLLLVLQAMDAAGKDGTIRHVMSGVNPQGCQVTSFKAP------------SAEELDHDFLWRIHKALPERGEIGIFNR 121 (264)
T ss_pred CCcEEEEEECCCCCCchHHHHHHHHhcCCCeeEEEeCCCC------------CHHHHcCchHHHHHHhCCCCCeEEEEcC
Confidence 458999999996554 45788889998899999999755 1122222224456667766667777766
Q ss_pred ehhHH
Q 025845 86 SLGGV 90 (247)
Q Consensus 86 S~Gg~ 90 (247)
|+=+-
T Consensus 122 SWY~~ 126 (264)
T TIGR03709 122 SHYED 126 (264)
T ss_pred ccccc
Confidence 65443
No 350
>PTZ00317 NADP-dependent malic enzyme; Provisional
Probab=43.17 E-value=57 Score=28.39 Aligned_cols=83 Identities=16% Similarity=0.082 Sum_probs=46.4
Q ss_pred EEEEEcCCC-CChhhHHHHHHHHHhCCc-------EEEEecCCCCCCCCCcccCccCHHHh-----------HHHHHHHH
Q 025845 11 HFVLVHGVN-HGAWCWYKLKARLVAGGH-------RVTAVDLAASGINMKRIEDVHTFHAY-----------SEPLMEVL 71 (247)
Q Consensus 11 ~iv~lhG~~-~~~~~~~~~~~~l~~~g~-------~vi~~D~~G~G~S~~~~~~~~~~~~~-----------~~~l~~~i 71 (247)
.||| -|.| .....-+.+...+.+.|. +++.+|-.|-=..+....-......+ ..++.+++
T Consensus 299 riv~-~GAGsAgiGia~ll~~~m~~~Gls~eeA~~~i~~vD~~GLl~~~r~~~l~~~k~~fa~~~~~~~~~~~~~L~e~v 377 (559)
T PTZ00317 299 RIVF-FGAGSAAIGVANNIADLAAEYGVTREEALKSFYLVDSKGLVTTTRGDKLAKHKVPFARTDISAEDSSLKTLEDVV 377 (559)
T ss_pred EEEE-ECCCHHHHHHHHHHHHHHHHcCCChhHhcCeEEEEcCCCeEeCCCCccccHHHHHHhccccccccccCCCHHHHH
Confidence 4444 4544 344556677776666676 89999998832222211000011111 23455666
Q ss_pred HhCCCCCcEEEEEEeh-hHHHHHHHHH
Q 025845 72 ASLPAEEKVILVGHSL-GGVTLALAAD 97 (247)
Q Consensus 72 ~~l~~~~~~~lvGhS~-Gg~ia~~~a~ 97 (247)
+ ..++-+|||-|- ||.+.-+...
T Consensus 378 ~---~~KPtvLIG~S~~~g~Ft~evv~ 401 (559)
T PTZ00317 378 R---FVKPTALLGLSGVGGVFTEEVVK 401 (559)
T ss_pred h---ccCCCEEEEecCCCCCCCHHHHH
Confidence 5 446889999996 7766544433
No 351
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=43.13 E-value=45 Score=25.19 Aligned_cols=37 Identities=22% Similarity=0.288 Sum_probs=22.5
Q ss_pred CCCcEEEEEcCCCCChhh-----HHHHHHHHHhCCcEEEEec
Q 025845 7 MEEKHFVLVHGVNHGAWC-----WYKLKARLVAGGHRVTAVD 43 (247)
Q Consensus 7 ~~~~~iv~lhG~~~~~~~-----~~~~~~~l~~~g~~vi~~D 43 (247)
.+++.|++.+|....... |..+++.|.+.+++|+.+-
T Consensus 103 ~~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~~~vvl~g 144 (247)
T PF01075_consen 103 KDKPYIGINPGASWPSKRWPAEKWAELIERLKERGYRVVLLG 144 (247)
T ss_dssp TTSSEEEEE---SSGGGS--HHHHHHHHHHHCCCT-EEEE--
T ss_pred ccCCeEEEeecCCCccccCCHHHHHHHHHHHHhhCceEEEEc
Confidence 456788888888764443 6788888887777877654
No 352
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=42.74 E-value=37 Score=26.93 Aligned_cols=28 Identities=18% Similarity=0.247 Sum_probs=21.6
Q ss_pred CCCcEEEEEEehhHHHHHHHHHhCCCcc
Q 025845 76 AEEKVILVGHSLGGVTLALAADKFPHKI 103 (247)
Q Consensus 76 ~~~~~~lvGhS~Gg~ia~~~a~~~p~~v 103 (247)
+..+-.+.|.|.|+.+|..++....+.+
T Consensus 95 ~l~~~~i~GtSaGAi~aa~~~~~~~~El 122 (298)
T cd07206 95 DLLPRVISGSSAGAIVAALLGTHTDEEL 122 (298)
T ss_pred CCCCCEEEEEcHHHHHHHHHHcCCcHHH
Confidence 4556789999999999999987544333
No 353
>PRK05571 ribose-5-phosphate isomerase B; Provisional
Probab=42.72 E-value=1.2e+02 Score=21.33 Aligned_cols=74 Identities=18% Similarity=0.275 Sum_probs=42.9
Q ss_pred HHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCCcEEEEEEehhHHHHHHHHHhCCCccce
Q 025845 26 YKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGVTLALAADKFPHKISV 105 (247)
Q Consensus 26 ~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~ 105 (247)
+.+.+.|.++||.|+-+- . .+.. ...++.+++..+.+.+..-....-+.++|...|-.++ |.++|. |+.
T Consensus 16 ~~l~~~L~~~g~eV~D~G---~--~~~~--~~~dYpd~a~~va~~V~~g~~~~GIliCGtGiG~sia---ANK~~G-IRA 84 (148)
T PRK05571 16 EEIIEHLEELGHEVIDLG---P--DSYD--ASVDYPDYAKKVAEAVVAGEADRGILICGTGIGMSIA---ANKVKG-IRA 84 (148)
T ss_pred HHHHHHHHHCCCEEEEcC---C--CCCC--CCCCHHHHHHHHHHHHHcCCCCEEEEEcCCcHHHHHH---HhcCCC-eEE
Confidence 467788888999885432 1 1111 0258889999998877655233445555665555433 445654 444
Q ss_pred EEEEe
Q 025845 106 AVFVT 110 (247)
Q Consensus 106 lvl~~ 110 (247)
.+..+
T Consensus 85 A~~~d 89 (148)
T PRK05571 85 ALCHD 89 (148)
T ss_pred EEECC
Confidence 44333
No 354
>COG1763 MobB Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism]
Probab=42.44 E-value=96 Score=22.10 Aligned_cols=39 Identities=26% Similarity=0.233 Sum_probs=32.0
Q ss_pred cEEEEEcCCCCChhh--HHHHHHHHHhCCcEEEEecCCCCC
Q 025845 10 KHFVLVHGVNHGAWC--WYKLKARLVAGGHRVTAVDLAASG 48 (247)
Q Consensus 10 ~~iv~lhG~~~~~~~--~~~~~~~l~~~g~~vi~~D~~G~G 48 (247)
++|+=+=|+-++... -+++++.|.++||+|-++-..+|+
T Consensus 2 ~~Il~ivG~k~SGKTTLie~lv~~L~~~G~rVa~iKH~hh~ 42 (161)
T COG1763 2 MKILGIVGYKNSGKTTLIEKLVRKLKARGYRVATVKHAHHD 42 (161)
T ss_pred CcEEEEEecCCCChhhHHHHHHHHHHhCCcEEEEEEecCCC
Confidence 456777787665543 689999999999999999999998
No 355
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=42.38 E-value=2.1e+02 Score=24.11 Aligned_cols=67 Identities=21% Similarity=0.127 Sum_probs=46.2
Q ss_pred HHHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCCcEEEEEEehhHHHHHHHHHhCCCccc
Q 025845 25 WYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGVTLALAADKFPHKIS 104 (247)
Q Consensus 25 ~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~ 104 (247)
=+.++..|.+.|.+|++.- ..+.+++-+.+...++.. +.++-+++ .-||.++..+...+|+..+
T Consensus 74 qd~vaa~l~~~gi~v~a~~-------------~~~~~~y~~~~~~~l~~~-~~~p~~i~--DdGg~~~~~~~~~~~~~~~ 137 (413)
T cd00401 74 QDHAAAAIAAAGIPVFAWK-------------GETLEEYWWCIEQALKFP-DGEPNMIL--DDGGDLTLLIHKKHPELLP 137 (413)
T ss_pred hHHHHHHHHhcCceEEEEc-------------CCCHHHHHHHHHHHHhcc-CCCCcEEE--ecchHHHHHHHhhhhhhhh
Confidence 4566667776677766653 247778888888888875 44555555 8899988888777776555
Q ss_pred eEE
Q 025845 105 VAV 107 (247)
Q Consensus 105 ~lv 107 (247)
.++
T Consensus 138 ~~~ 140 (413)
T cd00401 138 GIR 140 (413)
T ss_pred ccE
Confidence 544
No 356
>cd07217 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=42.17 E-value=25 Score=28.54 Aligned_cols=19 Identities=26% Similarity=0.247 Sum_probs=16.0
Q ss_pred EEEEEehhHHHHHHHHHhC
Q 025845 81 ILVGHSLGGVTLALAADKF 99 (247)
Q Consensus 81 ~lvGhS~Gg~ia~~~a~~~ 99 (247)
.+.|.|.||.+|..++..+
T Consensus 44 lIaGTStGgIIAa~la~g~ 62 (344)
T cd07217 44 FVGGTSTGSIIAACIALGM 62 (344)
T ss_pred EEEEecHHHHHHHHHHcCC
Confidence 5679999999999998643
No 357
>PF03853 YjeF_N: YjeF-related protein N-terminus; InterPro: IPR004443 The YjeF N-terminal domains occur either as single proteins or fusions with other domains and are commonly associated with enzymes. In bacteria and archaea, YjeF N-terminal domains are often fused to a YjeF C-terminal domain with high structural homology to the members of a ribokinase-like superfamily (see PDOC00806 from PROSITEDOC)and/or belong to operons that encode enzymes of diverse functions: pyridoxal phosphate biosynthetic protein PdxJ; phosphopanteine-protein transferase; ATP/GTP hydrolase; and pyruvate-formate lyase 1-activating enzyme. In plants, the YjeF N-terminal domain is fused to a C-terminal putative pyridoxamine 5'-phosphate oxidase. In eukaryotes, proteins that consist of (Sm)-FDF-YjeF N-terminal domains may be involved in RNA processing [, ]. The YjeF N-terminal domains represent a novel version of the Rossmann fold, one of the most common protein folds in nature observed in numerous enzyme families, that has acquired a set of catalytic residues and structural features that distinguish them from the conventional dehydrogenases. The YjeF N-terminal domain is comprised of a three-layer alpha-beta-alpha sandwich with a central beta-sheet surrounded by helices. The conservation of the acidic residues in the predicted active site of the YjeF N-terminal domains is reminiscent of the presence of such residues in the active sites of diverse hydrolases [, ].; PDB: 3K5W_A 2O8N_A 2DG2_F 3RNO_A 1JZT_B 3D3K_A 3D3J_A 3RSG_A 3RT9_A 3RRF_A ....
Probab=42.16 E-value=50 Score=23.56 Aligned_cols=59 Identities=12% Similarity=0.136 Sum_probs=38.4
Q ss_pred CCCCcEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhC
Q 025845 6 GMEEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASL 74 (247)
Q Consensus 6 ~~~~~~iv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l 74 (247)
....+.|+++-|-+.+...=--.+..|..+|++|.++=+.-. ......++.-.++++..
T Consensus 22 ~~~~~~v~il~G~GnNGgDgl~~AR~L~~~G~~V~v~~~~~~----------~~~~~~~~~~~~~~~~~ 80 (169)
T PF03853_consen 22 SPKGPRVLILCGPGNNGGDGLVAARHLANRGYNVTVYLVGPP----------EKLSEDAKQQLEILKKM 80 (169)
T ss_dssp CCTT-EEEEEE-SSHHHHHHHHHHHHHHHTTCEEEEEEEESS----------SSTSHHHHHHHHHHHHT
T ss_pred ccCCCeEEEEECCCCChHHHHHHHHHHHHCCCeEEEEEEecc----------ccCCHHHHHHHHHHHhc
Confidence 356788999999988887777788888889999888332210 13344455555666666
No 358
>COG4551 Predicted protein tyrosine phosphatase [General function prediction only]
Probab=42.10 E-value=65 Score=20.40 Aligned_cols=28 Identities=21% Similarity=0.462 Sum_probs=20.8
Q ss_pred CCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhC
Q 025845 35 GGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASL 74 (247)
Q Consensus 35 ~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l 74 (247)
+|-+||+.|.| .+++.+--.+.++++.-
T Consensus 74 k~kRviCLDIP------------Ddy~yMq~eLi~lLkrk 101 (109)
T COG4551 74 KGKRVICLDIP------------DDYEYMQPELIDLLKRK 101 (109)
T ss_pred cCCeEEEEeCC------------chHhhcCHHHHHHHHHh
Confidence 46899999988 46666667777777653
No 359
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=41.94 E-value=41 Score=25.26 Aligned_cols=16 Identities=38% Similarity=0.565 Sum_probs=12.5
Q ss_pred HHHHhCCcEEEEecCC
Q 025845 30 ARLVAGGHRVTAVDLA 45 (247)
Q Consensus 30 ~~l~~~g~~vi~~D~~ 45 (247)
..|+++|+.|+++|.-
T Consensus 53 ~~LA~~G~~V~avD~s 68 (218)
T PRK13255 53 LWLAEQGHEVLGVELS 68 (218)
T ss_pred HHHHhCCCeEEEEccC
Confidence 3456689999999954
No 360
>COG1576 Uncharacterized conserved protein [Function unknown]
Probab=41.90 E-value=1.2e+02 Score=21.51 Aligned_cols=56 Identities=16% Similarity=0.182 Sum_probs=35.5
Q ss_pred HHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCCcEEEEEEehhHHHHHHH
Q 025845 28 LKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGVTLALA 95 (247)
Q Consensus 28 ~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~lvGhS~Gg~ia~~~ 95 (247)
+...+. .|-.|++.|.+|-- .+-+++|+.+..+-+ . +.+=..+||-|.|=--++..
T Consensus 60 il~~i~-~~~~vi~Ld~~Gk~---------~sSe~fA~~l~~~~~-~-G~~i~f~IGG~~Gl~~~~~~ 115 (155)
T COG1576 60 ILAAIP-KGSYVVLLDIRGKA---------LSSEEFADFLERLRD-D-GRDISFLIGGADGLSEAVKA 115 (155)
T ss_pred HHHhcC-CCCeEEEEecCCCc---------CChHHHHHHHHHHHh-c-CCeEEEEEeCcccCCHHHHH
Confidence 334444 46789999988753 566777777766543 2 43455677888886555444
No 361
>PRK13512 coenzyme A disulfide reductase; Provisional
Probab=41.57 E-value=1e+02 Score=25.86 Aligned_cols=45 Identities=9% Similarity=0.164 Sum_probs=29.6
Q ss_pred HHHHHHHHHhCCCCCcEEEEEEehhHHHHHHHHHhCCCccceEEEEecc
Q 025845 64 SEPLMEVLASLPAEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAF 112 (247)
Q Consensus 64 ~~~l~~~i~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 112 (247)
++.+.+.+... ..+++.++| ||.+++++|...-..=..+.++...
T Consensus 136 ~~~l~~~l~~~-~~~~vvViG---gG~ig~E~A~~l~~~g~~Vtli~~~ 180 (438)
T PRK13512 136 TDAIDQFIKAN-QVDKALVVG---AGYISLEVLENLYERGLHPTLIHRS 180 (438)
T ss_pred HHHHHHHHhhc-CCCEEEEEC---CCHHHHHHHHHHHhCCCcEEEEecc
Confidence 44445555444 457999999 7888888887554444567777653
No 362
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=40.95 E-value=1.8e+02 Score=23.00 Aligned_cols=35 Identities=23% Similarity=0.399 Sum_probs=24.1
Q ss_pred EEEEcCC--CCChhhHHHHHHHHHhCCcEEEEecCCC
Q 025845 12 FVLVHGV--NHGAWCWYKLKARLVAGGHRVTAVDLAA 46 (247)
Q Consensus 12 iv~lhG~--~~~~~~~~~~~~~l~~~g~~vi~~D~~G 46 (247)
+++++|. +|.......+++.|.++|+.|..+...+
T Consensus 3 l~~~~~~~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~ 39 (360)
T cd04951 3 LYVITGLGLGGAEKQVVDLADQFVAKGHQVAIISLTG 39 (360)
T ss_pred EEEecCCCCCCHHHHHHHHHHhcccCCceEEEEEEeC
Confidence 4555654 4444556788899988899888776544
No 363
>PRK09273 hypothetical protein; Provisional
Probab=40.89 E-value=1.5e+02 Score=22.16 Aligned_cols=68 Identities=22% Similarity=0.219 Sum_probs=41.0
Q ss_pred hHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCCcEE-EEEEehhHHHHHHHHHhCCC
Q 025845 24 CWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVI-LVGHSLGGVTLALAADKFPH 101 (247)
Q Consensus 24 ~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~-lvGhS~Gg~ia~~~a~~~p~ 101 (247)
.++.+.+.|.+.||.|+=+-.- ++ . ....++.+++..+...+..- ..+..+ ++|.-.|-.+ .|-++|.
T Consensus 18 i~~~L~~~L~~~G~eV~D~G~~----~~-~-~~s~dYpd~a~~vA~~V~~g-~~d~GIliCGTGiG~si---AANK~pG 86 (211)
T PRK09273 18 IYEALKKVADPKGHEVFNYGMY----DE-E-DHQLTYVQNGIMASILLNSK-AVDFVVTGCGTGQGAML---ALNSFPG 86 (211)
T ss_pred HHHHHHHHHHHCCCEEEEeCCC----CC-C-CCCCChHHHHHHHHHHHHcC-CCCEEEEEcCcHHHHHH---HHhcCCC
Confidence 4788889999899988654321 11 1 11268899999998888654 333333 3344444433 3446665
No 364
>TIGR03707 PPK2_P_aer polyphosphate kinase 2, PA0141 family. Members of this protein family are designated polyphosphate kinase 2 (PPK2) after the characterized protein in Pseudomonas aeruginosa. This family comprises one of three well-separated clades in the larger family described by Pfam model pfam03976. PA0141 from this family has been shown capable of operating in reverse, with GDP preferred (over ADP) as a substrate, producing GTP (or ATP) by transfer of a phosphate residue from polyphosphate. Most species with a member of this family also encode a polyphosphate kinase 1 (PPK1).
Probab=40.49 E-value=1.5e+02 Score=22.51 Aligned_cols=71 Identities=15% Similarity=0.211 Sum_probs=49.8
Q ss_pred CCcEEEEEcCCCCCh--hhHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHH-HHHHHHhCCCCCcEEEEE
Q 025845 8 EEKHFVLVHGVNHGA--WCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEP-LMEVLASLPAEEKVILVG 84 (247)
Q Consensus 8 ~~~~iv~lhG~~~~~--~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~-l~~~i~~l~~~~~~~lvG 84 (247)
+.|.||++.|+-++. ..-+.+...|.-+|++|.++.-| +-++...+ +-.+-..++....+.++=
T Consensus 29 ~~~vlIv~eG~DaAGKg~~I~~l~~~lDPRg~~v~~~~~p-------------t~eE~~~p~lwRfw~~lP~~G~i~IF~ 95 (230)
T TIGR03707 29 GARVVIVFEGRDAAGKGGTIKRITEHLNPRGARVVALPKP-------------SDRERTQWYFQRYVQHLPAAGEIVLFD 95 (230)
T ss_pred CCCEEEEEeCCCCCCchHHHHHHHHhcCCCeeEEEeCCCC-------------CHHHHcChHHHHHHHhCCCCCeEEEEe
Confidence 458999999996554 45788888898899999998866 22233333 445667776667888877
Q ss_pred EehhHHH
Q 025845 85 HSLGGVT 91 (247)
Q Consensus 85 hS~Gg~i 91 (247)
-|+=+-+
T Consensus 96 rSwY~~~ 102 (230)
T TIGR03707 96 RSWYNRA 102 (230)
T ss_pred CchhhhH
Confidence 6765543
No 365
>KOG4231 consensus Intracellular membrane-bound Ca2+-independent phospholipase A2 [Lipid transport and metabolism]
Probab=40.17 E-value=34 Score=29.24 Aligned_cols=52 Identities=19% Similarity=0.275 Sum_probs=33.3
Q ss_pred hCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCCcEE-----EEEEehhHHHHHHHHHh
Q 025845 34 AGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVI-----LVGHSLGGVTLALAADK 98 (247)
Q Consensus 34 ~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~-----lvGhS~Gg~ia~~~a~~ 98 (247)
.+|.+++.+|-=| +---.+-.+..-|+.+ ..++++ ++|.|.||++|..+..+
T Consensus 414 g~G~rILSiDGGG------------trG~~~lqiL~kiekl-sgKpIheLFD~ICGvSTG~ilA~~Lg~k 470 (763)
T KOG4231|consen 414 GQGLRILSIDGGG------------TRGLATLQILKKIEKL-SGKPIHELFDLICGVSTGGILAIALGVK 470 (763)
T ss_pred CCceEEEEecCCC------------ccchhHHHHHHHHHHh-cCCcHHHHHHHHhccCchHHHHHHHHhc
Confidence 3667777777322 2222334445556666 455654 78999999999887654
No 366
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=39.88 E-value=2e+02 Score=23.30 Aligned_cols=91 Identities=13% Similarity=0.024 Sum_probs=52.7
Q ss_pred CCCcEEEEEcCCC----CCh-hhHHHHHHHHHh-CCcEEEEecCCCCCCCCCcc--------c----C---ccCHHHhH-
Q 025845 7 MEEKHFVLVHGVN----HGA-WCWYKLKARLVA-GGHRVTAVDLAASGINMKRI--------E----D---VHTFHAYS- 64 (247)
Q Consensus 7 ~~~~~iv~lhG~~----~~~-~~~~~~~~~l~~-~g~~vi~~D~~G~G~S~~~~--------~----~---~~~~~~~~- 64 (247)
..+..|+++-|.. ... .+--.+...|.. .+.+++++=.+|-|.-.-.. + . ...+.+-+
T Consensus 29 s~k~lV~CfDGT~nrfg~qp~TNVv~Ly~sl~r~d~~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL~~nI~ 108 (423)
T COG3673 29 SMKRLVFCFDGTWNRFGAQPPTNVVLLYASLQRADGVTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQGLVQNIR 108 (423)
T ss_pred CcceEEEEecCchhhcCCCCcchHHHHHHHHhcCCCceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHHHHHHHHH
Confidence 3455777777753 222 333455566654 56788887778877442111 0 0 01222222
Q ss_pred HHHHHHHHhCCCCCcEEEEEEehhHHHHHHHHH
Q 025845 65 EPLMEVLASLPAEEKVILVGHSLGGVTLALAAD 97 (247)
Q Consensus 65 ~~l~~~i~~l~~~~~~~lvGhS~Gg~ia~~~a~ 97 (247)
....=++.+....+++.++|+|-|+.+|-.+|.
T Consensus 109 ~AYrFL~~~yepGD~Iy~FGFSRGAf~aRVlag 141 (423)
T COG3673 109 EAYRFLIFNYEPGDEIYAFGFSRGAFSARVLAG 141 (423)
T ss_pred HHHHHHHHhcCCCCeEEEeeccchhHHHHHHHH
Confidence 222234445545689999999999999988775
No 367
>PF09664 DUF2399: Protein of unknown function C-terminus (DUF2399); InterPro: IPR024465 This domain is found in archaeal, bacterial and eukaryotic proteins. Its function is unknown.
Probab=39.86 E-value=42 Score=23.59 Aligned_cols=33 Identities=24% Similarity=0.186 Sum_probs=22.8
Q ss_pred CCCcEEEEEcCCCCChhhHHHHHHHHHhCCcEEEE
Q 025845 7 MEEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTA 41 (247)
Q Consensus 7 ~~~~~iv~lhG~~~~~~~~~~~~~~l~~~g~~vi~ 41 (247)
...+|+|+.+|.+. ..+..+.+.|.+.|.+++.
T Consensus 39 ~~~~pLVCt~G~p~--~A~~~LL~~L~~~g~~l~y 71 (152)
T PF09664_consen 39 ASCPPLVCTSGQPS--AAARRLLDRLAAAGARLYY 71 (152)
T ss_pred CCCCeEEEcCCcHH--HHHHHHHHHHHhCCCEEEE
Confidence 36789999988754 3345777777777765543
No 368
>KOG2730 consensus Methylase [General function prediction only]
Probab=39.80 E-value=53 Score=24.85 Aligned_cols=64 Identities=19% Similarity=0.082 Sum_probs=45.1
Q ss_pred hHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCCcEEEEEEehhHHHHHHHHHhCC
Q 025845 24 CWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGVTLALAADKFP 100 (247)
Q Consensus 24 ~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p 100 (247)
+|.++...+. +| +-.|+-|. ..+|.+..+..++...... ..-++++...+-||.=+..+|+++|
T Consensus 54 ~ryrlfsrfd-~g---i~md~e~w--------fsvTpe~ia~~iA~~v~~~-~~~~~iidaf~g~gGntiqfa~~~~ 117 (263)
T KOG2730|consen 54 NRYRLFSRFD-SG---IYMDREGW--------FSVTPEKIAEHIANRVVAC-MNAEVIVDAFCGVGGNTIQFALQGP 117 (263)
T ss_pred HHHHHHHhhc-cc---eeecccce--------EEeccHHHHHHHHHHHHHh-cCcchhhhhhhcCCchHHHHHHhCC
Confidence 4556666665 33 67776654 2478888888888777766 4567777777777777788888876
No 369
>PRK13529 malate dehydrogenase; Provisional
Probab=39.72 E-value=1.1e+02 Score=26.72 Aligned_cols=82 Identities=20% Similarity=0.129 Sum_probs=47.0
Q ss_pred EEEEcCCCC-ChhhHHHHHHHHHhCCc-------EEEEecCCCCCCCCCcccCccCHHHhH---------------HHHH
Q 025845 12 FVLVHGVNH-GAWCWYKLKARLVAGGH-------RVTAVDLAASGINMKRIEDVHTFHAYS---------------EPLM 68 (247)
Q Consensus 12 iv~lhG~~~-~~~~~~~~~~~l~~~g~-------~vi~~D~~G~G~S~~~~~~~~~~~~~~---------------~~l~ 68 (247)
-+++.|.|. ....-+.+...+...|. +++.+|..|-=..+.+... .....++ .++.
T Consensus 297 riv~~GAGsAgiGia~ll~~~~~~~Gl~~eeA~~~i~~vD~~GLl~~~r~~l~-~~k~~fa~~~~~~~~~~~~~~~~~L~ 375 (563)
T PRK13529 297 RIVFLGAGSAGCGIADQIVAAMVREGLSEEEARKRFFMVDRQGLLTDDMPDLL-DFQKPYARKREELADWDTEGDVISLL 375 (563)
T ss_pred EEEEECCCHHHHHHHHHHHHHHHHcCCChhHhcCeEEEEcCCCeEeCCCCcch-HHHHHHhhhcccccccccccCCCCHH
Confidence 344555553 44556777777666676 8999999984333222110 0111122 2455
Q ss_pred HHHHhCCCCCcEEEEEEeh-hHHHHHHHHH
Q 025845 69 EVLASLPAEEKVILVGHSL-GGVTLALAAD 97 (247)
Q Consensus 69 ~~i~~l~~~~~~~lvGhS~-Gg~ia~~~a~ 97 (247)
+.++ ..++-+|||-|- ||.+.-....
T Consensus 376 e~v~---~~kPtvLIG~S~~~g~Ft~evv~ 402 (563)
T PRK13529 376 EVVR---NVKPTVLIGVSGQPGAFTEEIVK 402 (563)
T ss_pred HHHh---ccCCCEEEEecCCCCCCCHHHHH
Confidence 5555 446889999998 7766554443
No 370
>PF13207 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6_G 2QT1_A 2QSZ_A 2QSY_A 2QT0_A 2QG6_A 2P0E_A ....
Probab=39.23 E-value=52 Score=21.48 Aligned_cols=71 Identities=20% Similarity=0.276 Sum_probs=36.0
Q ss_pred EEEEcCCCCChhhHHHHHHHHHhC-CcEEEEecC--CCCCCCCCcccCccCHHHhHHHHHHHHHhC---CCCCcEEEEE
Q 025845 12 FVLVHGVNHGAWCWYKLKARLVAG-GHRVTAVDL--AASGINMKRIEDVHTFHAYSEPLMEVLASL---PAEEKVILVG 84 (247)
Q Consensus 12 iv~lhG~~~~~~~~~~~~~~l~~~-g~~vi~~D~--~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l---~~~~~~~lvG 84 (247)
+|++-|..++.... ++..|+++ |+.++..|- +-.+....+...........+.+.+.++.+ .....+++-|
T Consensus 1 vI~I~G~~gsGKST--~a~~La~~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ii~g 77 (121)
T PF13207_consen 1 VIIISGPPGSGKST--LAKELAERLGFPVISMDDLIREPGWIERDDDEREYIDADIDLLDDILEQLQNKPDNDNWIIDG 77 (121)
T ss_dssp EEEEEESTTSSHHH--HHHHHHHHHTCEEEEEHHHHCCGTHCHGCTTCCHHHHHHHHHHHHHHHHHHETTT--EEEEEC
T ss_pred CEEEECCCCCCHHH--HHHHHHHHHCCeEEEecceEEeccccccCcchhhHHHHHHHHHHHHHHhhhccCCCCeEEEeC
Confidence 57888887776542 23344433 799999887 544444322211112333444444555544 1223455555
No 371
>COG1092 Predicted SAM-dependent methyltransferases [General function prediction only]
Probab=39.21 E-value=1.1e+02 Score=25.43 Aligned_cols=19 Identities=11% Similarity=0.025 Sum_probs=16.6
Q ss_pred CcEEEEecCCCCCCCCCcc
Q 025845 36 GHRVTAVDLAASGINMKRI 54 (247)
Q Consensus 36 g~~vi~~D~~G~G~S~~~~ 54 (247)
.|.||.+|.|.+++|....
T Consensus 290 ~fDlIilDPPsF~r~k~~~ 308 (393)
T COG1092 290 KFDLIILDPPSFARSKKQE 308 (393)
T ss_pred cccEEEECCcccccCcccc
Confidence 4999999999999997654
No 372
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=39.15 E-value=37 Score=27.14 Aligned_cols=22 Identities=32% Similarity=0.388 Sum_probs=18.6
Q ss_pred CCCcEEEEEEehhHHHHHHHHH
Q 025845 76 AEEKVILVGHSLGGVTLALAAD 97 (247)
Q Consensus 76 ~~~~~~lvGhS~Gg~ia~~~a~ 97 (247)
+.++..+.|||+|=+.|+.++.
T Consensus 83 ~~~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 83 GVKPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred CCCCceeecccHhHHHHHHHcc
Confidence 4778899999999998887765
No 373
>cd06562 GH20_HexA_HexB-like Beta-N-acetylhexosaminidases catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. The hexA and hexB genes encode the alpha- and beta-subunits of the two major beta-N-acetylhexosaminidase isoenzymes, N-acetyl-beta-D-hexosaminidase A (HexA) and beta-N-acetylhexosaminidase B (HexB). Both the alpha and the beta catalytic subunits have a TIM-barrel fold and belong to the glycosyl hydrolase family 20 (GH20). The HexA enzyme is a heterodimer containing one alpha and one beta subunit while the HexB enzyme is a homodimer containing two beta-subunits. Hexosaminidase mutations cause an inability to properly hydrolyze certain sphingolipids which accumulate in lysosomes within the brain, resulting in the lipid storage disorders Tay-Sachs and Sandhoff. Mutations in the alpha subunit cause in a deficiency in the HexA enzyme and result in
Probab=38.85 E-value=1.2e+02 Score=24.68 Aligned_cols=30 Identities=13% Similarity=-0.034 Sum_probs=25.1
Q ss_pred ChhhHHHHHHHHHhCCcEEEE-ecCCCCCCC
Q 025845 21 GAWCWYKLKARLVAGGHRVTA-VDLAASGIN 50 (247)
Q Consensus 21 ~~~~~~~~~~~l~~~g~~vi~-~D~~G~G~S 50 (247)
+...+..++..-+++|.+||- +|.|||-.+
T Consensus 68 T~~di~eiv~yA~~rgI~vIPEID~PGH~~a 98 (348)
T cd06562 68 TPEDVKEIVEYARLRGIRVIPEIDTPGHTGS 98 (348)
T ss_pred CHHHHHHHHHHHHHcCCEEEEeccCchhhHH
Confidence 566788888888889999886 999999755
No 374
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=38.68 E-value=56 Score=25.06 Aligned_cols=20 Identities=20% Similarity=0.306 Sum_probs=17.2
Q ss_pred EEEEEehhHHHHHHHHHhCC
Q 025845 81 ILVGHSLGGVTLALAADKFP 100 (247)
Q Consensus 81 ~lvGhS~Gg~ia~~~a~~~p 100 (247)
.+.|-|.|+.+|..++...+
T Consensus 33 ~i~GtSAGAl~aa~~a~g~~ 52 (245)
T cd07218 33 KISGASAGALAACCLLCDLP 52 (245)
T ss_pred eEEEEcHHHHHHHHHHhCCc
Confidence 49999999999999987654
No 375
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=38.61 E-value=68 Score=22.75 Aligned_cols=53 Identities=19% Similarity=0.061 Sum_probs=27.7
Q ss_pred CHHHhHHHHHHHHHhC-CCCCcEEEEEEehhHHHHHHHHHhCCCccceEEEEec
Q 025845 59 TFHAYSEPLMEVLASL-PAEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTA 111 (247)
Q Consensus 59 ~~~~~~~~l~~~i~~l-~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~ 111 (247)
.+++..+.+.++++.+ ...+++.+.|-|-.|..-+.++...++.+..++=.++
T Consensus 49 ~~~~~~~~l~~~L~~~~~~gk~I~~yGA~~kg~tlln~~g~~~~~I~~vvD~np 102 (160)
T PF08484_consen 49 RVEQSKAELREFLEKLKAEGKRIAGYGAGAKGNTLLNYFGLDNDLIDYVVDDNP 102 (160)
T ss_dssp HHHHHHHHHHHHHHHHHHTT--EEEE---SHHHHHHHHHT--TTTS--EEES-G
T ss_pred HHHHHHHHHHHHHHHHHHcCCEEEEECcchHHHHHHHHhCCCcceeEEEEeCCh
Confidence 3444445555555444 2457899999999999888888766666666664443
No 376
>KOG2170 consensus ATPase of the AAA+ superfamily [General function prediction only]
Probab=38.58 E-value=62 Score=25.81 Aligned_cols=29 Identities=10% Similarity=0.040 Sum_probs=21.7
Q ss_pred CCCCCcEEEEEcCCCCChhhH--HHHHHHHH
Q 025845 5 VGMEEKHFVLVHGVNHGAWCW--YKLKARLV 33 (247)
Q Consensus 5 ~~~~~~~iv~lhG~~~~~~~~--~~~~~~l~ 33 (247)
..+.+|-++=+||+.|+...| +-+++.+-
T Consensus 105 ~~p~KPLvLSfHG~tGTGKN~Va~iiA~n~~ 135 (344)
T KOG2170|consen 105 PNPRKPLVLSFHGWTGTGKNYVAEIIAENLY 135 (344)
T ss_pred CCCCCCeEEEecCCCCCchhHHHHHHHHHHH
Confidence 457889999999999998876 34444443
No 377
>cd01983 Fer4_NifH The Fer4_NifH superfamily contains a variety of proteins which share a common ATP-binding domain. Functionally, proteins in this superfamily use the energy from hydrolysis of NTP to transfer electron or ion.
Probab=38.48 E-value=77 Score=19.21 Aligned_cols=31 Identities=29% Similarity=0.311 Sum_probs=21.0
Q ss_pred EEEcCCCCChhh--HHHHHHHHHhCCcEEEEec
Q 025845 13 VLVHGVNHGAWC--WYKLKARLVAGGHRVTAVD 43 (247)
Q Consensus 13 v~lhG~~~~~~~--~~~~~~~l~~~g~~vi~~D 43 (247)
+++-|.+|.... -..++..|++.|++|..+|
T Consensus 2 ~~~~g~~G~Gktt~~~~l~~~l~~~g~~v~~~~ 34 (99)
T cd01983 2 IVVTGKGGVGKTTLAANLAAALAKRGKRVLLID 34 (99)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEC
Confidence 344455444333 3677888887899999999
No 378
>TIGR02363 dhaK1 dihydroxyacetone kinase, DhaK subunit. Two types of dihydroxyacetone kinase (glycerone kinase) are described. In yeast and a few bacteria, e.g. Citrobacter freundii, the enzyme is a single chain that uses ATP as phosphoryl donor and is designated EC 2.7.1.29. By contract, E. coli and many other bacterial species have a multisubunit form (EC 2.7.1.-) with a phosphoprotein donor related to PTS transport proteins. This family represents the DhaK subunit of the latter type of dihydroxyacetone kinase, but it specifically excludes the DhaK paralog DhaK2 (TIGR02362) found in the same operon as DhaK and DhaK in the Firmicutes.
Probab=38.46 E-value=93 Score=25.12 Aligned_cols=35 Identities=20% Similarity=0.324 Sum_probs=26.9
Q ss_pred CCcEEEEEcCCCCChhh-----HHHHHHHHHhCCcEEEEe
Q 025845 8 EEKHFVLVHGVNHGAWC-----WYKLKARLVAGGHRVTAV 42 (247)
Q Consensus 8 ~~~~iv~lhG~~~~~~~-----~~~~~~~l~~~g~~vi~~ 42 (247)
....+|++.|+++++.. ++.+.+.|.++|..+...
T Consensus 252 gd~v~vlvN~LG~ts~lEl~i~~~~v~~~L~~~gi~v~r~ 291 (329)
T TIGR02363 252 GDRVIVLVNGMGATPLMELYIFYNDVQRLLEQRGVNVART 291 (329)
T ss_pred CCeEEEEEeCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEE
Confidence 34689999999998754 678888888788775543
No 379
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=38.45 E-value=77 Score=25.54 Aligned_cols=35 Identities=20% Similarity=0.200 Sum_probs=26.7
Q ss_pred CcEEEEEcC-CCCC-----hhhHHHHHHHHHhCCcEEEEec
Q 025845 9 EKHFVLVHG-VNHG-----AWCWYKLKARLVAGGHRVTAVD 43 (247)
Q Consensus 9 ~~~iv~lhG-~~~~-----~~~~~~~~~~l~~~g~~vi~~D 43 (247)
+|.|+|.|| ..+. .+.|..+++.|.++|+.|+.+-
T Consensus 175 ~~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~~~Vvl~g 215 (334)
T COG0859 175 RPYIVINPGASRGSAKRWPLEHYAELAELLIAKGYQVVLFG 215 (334)
T ss_pred CCeEEEeccccccccCCCCHHHHHHHHHHHHHCCCEEEEec
Confidence 588999999 4423 3457899999988888888764
No 380
>PRK08621 galactose-6-phosphate isomerase subunit LacA; Reviewed
Probab=38.36 E-value=1.4e+02 Score=20.84 Aligned_cols=55 Identities=11% Similarity=0.093 Sum_probs=34.6
Q ss_pred HHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCCcEEEEEEehhHH
Q 025845 26 YKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGV 90 (247)
Q Consensus 26 ~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~lvGhS~Gg~ 90 (247)
+.+.+.|.+.||.|+ |+ |. .+ ..++.+++..+.+.+..-....-+.++|.-.|-.
T Consensus 16 ~~l~~~L~~~G~eV~--D~-G~--~~-----~~dYpd~a~~va~~V~~~~~~~GIliCGTGiG~s 70 (142)
T PRK08621 16 EVVKDYLEDNKYEVV--DV-TE--EG-----AEDFVDSTLAVAKEVNKSEDNLGIVIDAYGAGSF 70 (142)
T ss_pred HHHHHHHHHCCCEEE--EC-CC--CC-----CCCcHHHHHHHHHHHHcCCCceEEEEcCCChhhh
Confidence 467788988999986 44 22 11 2578888988888775542233445556555543
No 381
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=38.09 E-value=1.8e+02 Score=22.02 Aligned_cols=63 Identities=19% Similarity=0.212 Sum_probs=37.6
Q ss_pred CCCcEEEEEcCCCCChhh-HHHHHHHHHhCCc-EEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCCcEEEEE
Q 025845 7 MEEKHFVLVHGVNHGAWC-WYKLKARLVAGGH-RVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVG 84 (247)
Q Consensus 7 ~~~~~iv~lhG~~~~~~~-~~~~~~~l~~~g~-~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~lvG 84 (247)
.+.-.|++.||...++.. |..+--.|.+.|| .|+....-|+ | . .+++.+-++.- +.++++|+=
T Consensus 136 k~e~~vlmgHGt~h~s~~~YacLd~~~~~~~f~~v~v~~ve~y-----P-----~----~d~vi~~l~~~-~~~~v~L~P 200 (265)
T COG4822 136 KDEILVLMGHGTDHHSNAAYACLDHVLDEYGFDNVFVAAVEGY-----P-----L----VDTVIEYLRKN-GIKEVHLIP 200 (265)
T ss_pred cCeEEEEEecCCCccHHHHHHHHHHHHHhcCCCceEEEEecCC-----C-----c----HHHHHHHHHHc-CCceEEEee
Confidence 445578888998776654 4455455666777 5665554443 1 1 34455555655 777777663
No 382
>PRK08622 galactose-6-phosphate isomerase subunit LacB; Reviewed
Probab=37.91 E-value=1.5e+02 Score=21.33 Aligned_cols=64 Identities=20% Similarity=0.261 Sum_probs=37.7
Q ss_pred HHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCCcEE-EEEEehhHHHHHHHHHhCCC
Q 025845 26 YKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVI-LVGHSLGGVTLALAADKFPH 101 (247)
Q Consensus 26 ~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~-lvGhS~Gg~ia~~~a~~~p~ 101 (247)
+.+.+.|.+.||.|+-+-- .+. +..++.+++..+.+.+..- ..+.-+ ++|.-.|-.+ +|.+.|.
T Consensus 16 ~~l~~~L~~~G~eV~D~G~-----~~~---e~~dYpd~a~~va~~V~~g-~~d~GIliCGTGiG~si---aANKv~G 80 (171)
T PRK08622 16 MAVSDYLKSKGHEVIDVGT-----YDF---TRTHYPIFGKKVGEAVASG-EADLGVCICGTGVGISN---AVNKVPG 80 (171)
T ss_pred HHHHHHHHHCCCEEEEcCC-----CCC---CCCChHHHHHHHHHHHHcC-CCcEEEEEcCCcHHHHH---HHhcCCC
Confidence 5677889889998854431 111 1257889999998877654 334444 4454444332 2345554
No 383
>PTZ00215 ribose 5-phosphate isomerase; Provisional
Probab=37.84 E-value=1.4e+02 Score=20.97 Aligned_cols=70 Identities=13% Similarity=0.203 Sum_probs=41.5
Q ss_pred HHHHHHHHh--CCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCCcEEEEEEehhHHHHHHHHHhCCCcc
Q 025845 26 YKLKARLVA--GGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGVTLALAADKFPHKI 103 (247)
Q Consensus 26 ~~~~~~l~~--~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v 103 (247)
+.+.+.|.+ .||.|+-+- ..+.. ..++.+++..+.+.+..-....-+.++|..+|-.++ |.++|. |
T Consensus 18 ~~l~~~L~~~~~g~eV~D~G-----~~~~~---~~dYp~~a~~va~~V~~~~~~~GIliCGtGiG~sia---ANK~~G-I 85 (151)
T PTZ00215 18 NEIIDYIKNKGKEYKIEDMG-----TYTAE---SVDYPDFAEKVCEEVLKGEADTGILVCGSGIGISIA---ANKVKG-I 85 (151)
T ss_pred HHHHHHHHhccCCCEEEEcC-----CCCCC---CCCHHHHHHHHHHHHhcCCCcEEEEEcCCcHHHHHH---HhcCCC-e
Confidence 567788998 899886542 11111 257888999998877655222345555666665433 445554 4
Q ss_pred ceEE
Q 025845 104 SVAV 107 (247)
Q Consensus 104 ~~lv 107 (247)
+..+
T Consensus 86 RAa~ 89 (151)
T PTZ00215 86 RCAL 89 (151)
T ss_pred EEEE
Confidence 3333
No 384
>PRK13230 nitrogenase reductase-like protein; Reviewed
Probab=37.50 E-value=79 Score=24.59 Aligned_cols=37 Identities=19% Similarity=0.237 Sum_probs=27.5
Q ss_pred EEEEEcCCCCChhh--HHHHHHHHHhCCcEEEEecCCCCC
Q 025845 11 HFVLVHGVNHGAWC--WYKLKARLVAGGHRVTAVDLAASG 48 (247)
Q Consensus 11 ~iv~lhG~~~~~~~--~~~~~~~l~~~g~~vi~~D~~G~G 48 (247)
+|+|. |=||.... --.++..|+++|++|+.+|+=-.|
T Consensus 3 ~i~~~-gKGGVGKTT~a~nLA~~La~~G~rVLliD~Dpq~ 41 (279)
T PRK13230 3 KFCFY-GKGGIGKSTTVCNIAAALAESGKKVLVVGCDPKA 41 (279)
T ss_pred EEEEE-CCCCCcHHHHHHHHHHHHHhCCCEEEEEeeCCcc
Confidence 56666 77776554 357888999999999999984443
No 385
>PF01341 Glyco_hydro_6: Glycosyl hydrolases family 6; InterPro: IPR016288 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The 1,4-beta cellobiohydrolase family plays a central role in the recycling of plant biomass. The biological conversion of cellulose to glucose generally requires three types of hydrolytic enzymes: Endoglucanases, which cut internal beta-1,4-glucosidic bonds; Exocellobiohydrolases that cut the dissaccharide cellobiose from the non-reducing end of the cellulose polymer chain; and Beta-1,4-glucosidases, which hydrolyze the cellobiose and other short cello-oligosaccharides to glucose.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0030245 cellulose catabolic process; PDB: 2BOF_X 2BOG_X 1TML_A 3RPT_A 2BOD_X 2BOE_X 1DYS_B 3VOI_A 3VOG_A 3VOJ_A ....
Probab=37.49 E-value=68 Score=25.49 Aligned_cols=46 Identities=4% Similarity=0.291 Sum_probs=28.0
Q ss_pred cEEEEecCCCCC----CCCC-cccCccCHHHhHHHHHHHHHhCCCCCcEEEE
Q 025845 37 HRVTAVDLAASG----INMK-RIEDVHTFHAYSEPLMEVLASLPAEEKVILV 83 (247)
Q Consensus 37 ~~vi~~D~~G~G----~S~~-~~~~~~~~~~~~~~l~~~i~~l~~~~~~~lv 83 (247)
--++++++|+.. .|.. ......++..|++.+.+.|.++ +..++++|
T Consensus 63 ~vlVvY~lP~RDC~a~~S~Geg~~~~~~Yk~wId~ia~~i~~~-g~~~~vvI 113 (298)
T PF01341_consen 63 PVLVVYNLPNRDCAAGASAGEGADSLASYKEWIDPIAAGIKKY-GDRRAVVI 113 (298)
T ss_dssp EEEEE---TTCSTTSSSTSSSGGTHHHHHHHHHHHHHHHHHHT-TTSEEEEE
T ss_pred eEEEEeccCCCCccccccCCCCCCchhHHHHHHHHHHHHHHhc-CCCceEEE
Confidence 367789998743 3333 2223357778999999999888 56666665
No 386
>COG3186 Phenylalanine-4-hydroxylase [Amino acid transport and metabolism]
Probab=37.11 E-value=22 Score=27.13 Aligned_cols=15 Identities=27% Similarity=0.494 Sum_probs=11.7
Q ss_pred CccccccChhhHHHHH
Q 025845 228 RRAFFLYHNTLFIQFV 243 (247)
Q Consensus 228 gH~~~~e~p~~~~~~v 243 (247)
||+|++.+| .|++..
T Consensus 148 GHvP~Lt~P-~FAdf~ 162 (291)
T COG3186 148 GHVPMLTHP-VFADFM 162 (291)
T ss_pred ccCchhcCc-hHHHHH
Confidence 999999999 455543
No 387
>COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms]
Probab=36.84 E-value=1.4e+02 Score=26.30 Aligned_cols=102 Identities=18% Similarity=0.209 Sum_probs=56.0
Q ss_pred CCCcEEEEEcCCCCChhhHHHHHH------HHHh-CCc-EEEEecCCC----CCCCCCcccC--ccCHHHhHHHHHHHHH
Q 025845 7 MEEKHFVLVHGVNHGAWCWYKLKA------RLVA-GGH-RVTAVDLAA----SGINMKRIED--VHTFHAYSEPLMEVLA 72 (247)
Q Consensus 7 ~~~~~iv~lhG~~~~~~~~~~~~~------~l~~-~g~-~vi~~D~~G----~G~S~~~~~~--~~~~~~~~~~l~~~i~ 72 (247)
...-||=+-=|++-+......+.+ .|+. +|= .|+.-.--| +|.-+.+..+ ..+...+...+.+++.
T Consensus 256 ~~~ipLTLSiGvg~g~~~~~elg~vA~~~L~lAlgRGGDQVvIke~~~k~~fyGG~s~~~ekrTRvRaRvis~al~d~i~ 335 (655)
T COG3887 256 QKNIPLTLSIGVGYGENNLIELGEVAQSNLDLALGRGGDQVVIKENNGKVRFYGGKSNPMEKRTRVRARVISTALSDIIK 335 (655)
T ss_pred ccCcceEEEEEeccCcccHHHHHHHHHHhHHHHhccCCceEEEEcCCCceeeeCCCcchhHHhHHHHHHHHHHHHHHHHh
Confidence 445577777777765554432221 2221 333 444443322 4443333221 1233334445555554
Q ss_pred hCCCCCcEEEEEE------ehhHHHHHHHHHhCCCccceEEEEecc
Q 025845 73 SLPAEEKVILVGH------SLGGVTLALAADKFPHKISVAVFVTAF 112 (247)
Q Consensus 73 ~l~~~~~~~lvGh------S~Gg~ia~~~a~~~p~~v~~lvl~~~~ 112 (247)
..++|+++|| +.|+.+++..-+...++ .+-+++++.
T Consensus 336 ---e~d~VfImGHk~pDmDalGsAig~~~~A~~~~~-~a~~v~dp~ 377 (655)
T COG3887 336 ---ESDNVFIMGHKFPDMDALGSAIGMQKFASMNNK-EAFAVLDPE 377 (655)
T ss_pred ---hcCcEEEEccCCCChHHHHHHHHHHHHHHhccc-ccEEEECcc
Confidence 4579999999 78999998766555444 667777763
No 388
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=36.64 E-value=66 Score=22.50 Aligned_cols=19 Identities=26% Similarity=0.069 Sum_probs=16.7
Q ss_pred CcEEEEEEehhHHHHHHHH
Q 025845 78 EKVILVGHSLGGVTLALAA 96 (247)
Q Consensus 78 ~~~~lvGhS~Gg~ia~~~a 96 (247)
..-.+.|.|.|+.++..++
T Consensus 28 ~~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 28 CVTYLAGTSGGAWVAATLY 46 (155)
T ss_pred CCCEEEEEcHHHHHHHHHh
Confidence 5667889999999999998
No 389
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=36.58 E-value=51 Score=24.63 Aligned_cols=16 Identities=50% Similarity=0.729 Sum_probs=12.6
Q ss_pred HHHHhCCcEEEEecCC
Q 025845 30 ARLVAGGHRVTAVDLA 45 (247)
Q Consensus 30 ~~l~~~g~~vi~~D~~ 45 (247)
..|+++|+.|+++|.-
T Consensus 50 ~~LA~~G~~V~gvD~S 65 (213)
T TIGR03840 50 AWLAEQGHRVLGVELS 65 (213)
T ss_pred HHHHhCCCeEEEEeCC
Confidence 4566789999999954
No 390
>PRK11460 putative hydrolase; Provisional
Probab=36.56 E-value=1.6e+02 Score=22.24 Aligned_cols=41 Identities=20% Similarity=0.143 Sum_probs=26.8
Q ss_pred CCcEEEEEcCCCCCh---hhHHHHHHHHHhCCcEEEEecCCCCC
Q 025845 8 EEKHFVLVHGVNHGA---WCWYKLKARLVAGGHRVTAVDLAASG 48 (247)
Q Consensus 8 ~~~~iv~lhG~~~~~---~~~~~~~~~l~~~g~~vi~~D~~G~G 48 (247)
.++|++++||--... ..-....+.|.+.|..+-..-++|.|
T Consensus 147 ~~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~~g 190 (232)
T PRK11460 147 TATTIHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIVEDLG 190 (232)
T ss_pred CCCcEEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCC
Confidence 357899999987653 33456667777667666555556444
No 391
>PF00091 Tubulin: Tubulin/FtsZ family, GTPase domain; InterPro: IPR003008 This domain is found in all tubulin chains, as well as the bacterial FtsZ family of proteins. These proteins are involved in polymer formation. Tubulin is the major component of microtubules, while FtsZ is the polymer-forming protein of bacterial cell division, it is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases, this entry is the GTPase domain. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in bacteria and archaea.; GO: 0051258 protein polymerization, 0043234 protein complex; PDB: 3E22_B 1SA1_D 3DU7_B 2P4N_B 3DCO_B 1Z2B_D 1SA0_B 2XRP_C 1TVK_B 2BTQ_B ....
Probab=36.55 E-value=1.4e+02 Score=22.22 Aligned_cols=30 Identities=23% Similarity=0.274 Sum_probs=19.3
Q ss_pred HHhHHHHHHHHHhCCCCCcEEEEEEehhHHH
Q 025845 61 HAYSEPLMEVLASLPAEEKVILVGHSLGGVT 91 (247)
Q Consensus 61 ~~~~~~l~~~i~~l~~~~~~~lvGhS~Gg~i 91 (247)
+...+.+.+.++.. +.-..+++=||+||..
T Consensus 108 ~~~~~~ir~~~e~~-d~~~~~~i~~slgGGT 137 (216)
T PF00091_consen 108 EEILEQIRKEIEKC-DSLDGFFIVHSLGGGT 137 (216)
T ss_dssp HHHHHHHHHHHHTS-TTESEEEEEEESSSSH
T ss_pred cccccccchhhccc-cccccceeccccccee
Confidence 33445555556555 5557788888998863
No 392
>PF00731 AIRC: AIR carboxylase; InterPro: IPR000031 Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. PurK, N5-carboxyaminoimidazole ribonucleotide (N5_CAIR) synthetase, catalyzes the conversion of 5-aminoimidazole ribonucleotide (AIR), ATP, and bicarbonate to N5-CAIR, ADP, and Pi. PurE converts N5-CAIR to CAIR, the sixth step of de novo purine biosynthesis. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP. Some members of this family contain two copies of this domain []. The crystal structure of PurE indicates a unique quaternary structure that confirms the octameric nature of the enzyme [].; GO: 0004638 phosphoribosylaminoimidazole carboxylase activity, 0006189 'de novo' IMP biosynthetic process; PDB: 3TRH_O 2YWX_A 2NSL_A 1D7A_A 2NSJ_A 1QCZ_A 2ATE_A 2NSH_A 3RG8_C 3RGG_D ....
Probab=36.42 E-value=1.5e+02 Score=20.83 Aligned_cols=77 Identities=16% Similarity=0.141 Sum_probs=49.5
Q ss_pred cEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCC-CCcEEEEEEehh
Q 025845 10 KHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPA-EEKVILVGHSLG 88 (247)
Q Consensus 10 ~~iv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~-~~~~~lvGhS~G 88 (247)
|.|..+-|..++....++....|.+-| +.+|.+ ..+..+..+.+.++++.+.. .-++++.+-.+-
T Consensus 1 p~V~Ii~gs~SD~~~~~~a~~~L~~~g---i~~~~~-----------V~saHR~p~~l~~~~~~~~~~~~~viIa~AG~~ 66 (150)
T PF00731_consen 1 PKVAIIMGSTSDLPIAEEAAKTLEEFG---IPYEVR-----------VASAHRTPERLLEFVKEYEARGADVIIAVAGMS 66 (150)
T ss_dssp -EEEEEESSGGGHHHHHHHHHHHHHTT----EEEEE-----------E--TTTSHHHHHHHHHHTTTTTESEEEEEEESS
T ss_pred CeEEEEeCCHHHHHHHHHHHHHHHHcC---CCEEEE-----------EEeccCCHHHHHHHHHHhccCCCEEEEEECCCc
Confidence 567888888888888899999998766 334433 23445555666677766621 236888888888
Q ss_pred HHHHHHHHHhCC
Q 025845 89 GVTLALAADKFP 100 (247)
Q Consensus 89 g~ia~~~a~~~p 100 (247)
+.+.-.+|..-+
T Consensus 67 a~Lpgvva~~t~ 78 (150)
T PF00731_consen 67 AALPGVVASLTT 78 (150)
T ss_dssp --HHHHHHHHSS
T ss_pred ccchhhheeccC
Confidence 888877777643
No 393
>TIGR03702 lip_kinase_YegS lipid kinase YegS. Members of this protein family are designated YegS, an apparent lipid kinase family in the Proteobacteria. Bakali, et al. report phosphatidylglycerol kinase activity for the member from Escherichia coli, but refrain from calling that activity synonymous with its biological role. Note that a broader, subfamily-type model (TIGR00147), includes this family but also multiple paralogs in some species and varied functions.
Probab=36.18 E-value=1.9e+02 Score=22.71 Aligned_cols=30 Identities=10% Similarity=0.095 Sum_probs=22.9
Q ss_pred EEEEEcCCCCChhhHHHHHHHHHhCCcEEE
Q 025845 11 HFVLVHGVNHGAWCWYKLKARLVAGGHRVT 40 (247)
Q Consensus 11 ~iv~lhG~~~~~~~~~~~~~~l~~~g~~vi 40 (247)
.+++++|-++....|..+.+.|.+.|+.+.
T Consensus 2 ~~~I~N~~~~~~~~~~~~~~~l~~~g~~~~ 31 (293)
T TIGR03702 2 ALLILNGKQADNEDVREAVGDLRDEGIQLH 31 (293)
T ss_pred EEEEEeCCccchhHHHHHHHHHHHCCCeEE
Confidence 467888877776788888888987776643
No 394
>TIGR02361 dak_ATP dihydroxyacetone kinase, ATP-dependent. This family consists of examples of the form of dihydroxyacetone kinase (also called glycerone kinase) that uses ATP (2.7.1.29) as the phosphate donor, rather than a phosphoprotein as in E. coli. This form is composed of a single chain with separable domains homologous to the K and L subunits of the E. coli enzyme, and is found in yeasts and other eukaryotes and in some bacteria, including Citrobacter freundii. The member from tomato has been shown to phosphorylate dihydroxyacetone, 3,4-dihydroxy-2-butanone, and some other aldoses and ketoses (PubMed:11985845).
Probab=36.15 E-value=88 Score=27.51 Aligned_cols=61 Identities=8% Similarity=0.036 Sum_probs=36.7
Q ss_pred CCcEEEEEcCCCCChhh-----HHHHHHHHHhCC-cEEEE---------ecCCCCCCCCCcccCccCHHHhHHHHHHHHH
Q 025845 8 EEKHFVLVHGVNHGAWC-----WYKLKARLVAGG-HRVTA---------VDLAASGINMKRIEDVHTFHAYSEPLMEVLA 72 (247)
Q Consensus 8 ~~~~iv~lhG~~~~~~~-----~~~~~~~l~~~g-~~vi~---------~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~ 72 (247)
....+|++.|+++++.. ++.+.+.|.+++ +.+.. .|++|+-.|- ...++.++++.++++
T Consensus 258 ~d~v~~lvN~lG~t~~~El~i~~~~~~~~l~~~~~i~v~~~~~G~~~Tsl~m~G~SlTl------~~ld~~~~e~~~~ld 331 (574)
T TIGR02361 258 GDEVVLLVNNLGGVSNLELGIIADEVVEQLALHYNIIPVRIYSGTFMTSLNGPGFSITL------LNATEAGKSILDLLD 331 (574)
T ss_pred CCeEEEEEeCCCCCCHHHHHHHHHHHHHHHHhCCCceEEEEeeecccccCCCCccEEEE------EecCCChHHHHHHhC
Confidence 34799999999998754 577778885444 55433 3555553221 233343446666665
Q ss_pred hC
Q 025845 73 SL 74 (247)
Q Consensus 73 ~l 74 (247)
.=
T Consensus 332 ap 333 (574)
T TIGR02361 332 AP 333 (574)
T ss_pred CC
Confidence 43
No 395
>KOG1752 consensus Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones]
Probab=36.11 E-value=1.2e+02 Score=19.71 Aligned_cols=78 Identities=17% Similarity=0.163 Sum_probs=46.1
Q ss_pred CCCcEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCCcEEEEEEe
Q 025845 7 MEEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHS 86 (247)
Q Consensus 7 ~~~~~iv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~lvGhS 86 (247)
.+.|.|+|.--+.........+...+. -.+.|+-.|...+| . ++.+.+.++--+- ....+.+-|.+
T Consensus 12 ~~~~VVifSKs~C~~c~~~k~ll~~~~-v~~~vvELD~~~~g---------~---eiq~~l~~~tg~~-tvP~vFI~Gk~ 77 (104)
T KOG1752|consen 12 SENPVVIFSKSSCPYCHRAKELLSDLG-VNPKVVELDEDEDG---------S---EIQKALKKLTGQR-TVPNVFIGGKF 77 (104)
T ss_pred hcCCEEEEECCcCchHHHHHHHHHhCC-CCCEEEEccCCCCc---------H---HHHHHHHHhcCCC-CCCEEEECCEE
Confidence 356788888766555544555544443 34788888866443 1 2333333332222 45678888999
Q ss_pred hhHHHHHHHHHh
Q 025845 87 LGGVTLALAADK 98 (247)
Q Consensus 87 ~Gg~ia~~~a~~ 98 (247)
.||.--+.....
T Consensus 78 iGG~~dl~~lh~ 89 (104)
T KOG1752|consen 78 IGGASDLMALHK 89 (104)
T ss_pred EcCHHHHHHHHH
Confidence 999865555543
No 396
>COG3621 Patatin [General function prediction only]
Probab=36.01 E-value=55 Score=26.33 Aligned_cols=52 Identities=19% Similarity=0.156 Sum_probs=32.7
Q ss_pred cEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCC---CCcEEEE-EEehhHHHHHHHHHhCC
Q 025845 37 HRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPA---EEKVILV-GHSLGGVTLALAADKFP 100 (247)
Q Consensus 37 ~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~---~~~~~lv-GhS~Gg~ia~~~a~~~p 100 (247)
|++..+|==|- .-....++...|++.++ .+.+.++ |.|.||.+++.+|...+
T Consensus 9 ~rIlsldGGGv------------rG~i~lE~lr~ieqiqGkkl~e~FDl~~GTSiGgilal~La~~ks 64 (394)
T COG3621 9 YRILSLDGGGV------------RGAILLEKLRIIEQIQGKKLCEYFDLIGGTSIGGILALGLALGKS 64 (394)
T ss_pred eeEEEecCCcc------------ccHHHHHHHHHHHHHhCCcceeeEeeecCccHHHHHHHHHhcCCC
Confidence 77777773221 11455566666666522 2345555 99999999999987543
No 397
>TIGR02362 dhaK1b probable dihydroxyacetone kinase DhaK1b subunit. Two types of dihydroxyacetone kinase (glycerone kinase) are described. In yeast and a few bacteria, e.g. Citrobacter freundii, the enzyme is a single chain that uses ATP as phosphoryl donor and is designated EC 2.7.1.29. By contract, E. coli and many other bacterial species have a multisubunit form with a phosphoprotein donor related to PTS transport proteins. This family represents a protein, unique to the Firmicutes (low GC Gram-positives), that appears to be a divergent second copy of the K subunit of that complex; its gene is always found in operons with the other three proteins of the complex.
Probab=35.93 E-value=1.1e+02 Score=24.59 Aligned_cols=34 Identities=12% Similarity=0.050 Sum_probs=26.8
Q ss_pred CCcEEEEEcCCCCChhh-----HHHHHHHHHhCCcEEEE
Q 025845 8 EEKHFVLVHGVNHGAWC-----WYKLKARLVAGGHRVTA 41 (247)
Q Consensus 8 ~~~~iv~lhG~~~~~~~-----~~~~~~~l~~~g~~vi~ 41 (247)
....+|++.|+++++.. ++.+.+.|.++|..+..
T Consensus 248 gd~v~vlvN~LG~t~~lEl~i~~~~v~~~L~~~gi~v~r 286 (326)
T TIGR02362 248 DDHYAVLVNNLGGTTPMEQMVFNNDVHELLALEALHLPF 286 (326)
T ss_pred CCEEEEEecCCCCCCHHHHHHHHHHHHHHHHHCCCEEEE
Confidence 34689999999998754 67888899878877554
No 398
>cd03348 pro_PheOH Prokaryotic phenylalanine-4-hydroxylase (pro_PheOH); a member of the biopterin-dependent aromatic amino acid hydroxylase family of non-heme, iron(II)-dependent enzymes that also includes the eukaryotic proteins, phenylalanine-4-hydroxylase (eu_PheOH), tyrosine hydroxylase (TyrOH) and tryptophan hydroxylase (TrpOH). PheOH catalyzes the hydroxylation of L-Phe to L-tyrosine (L-Tyr). It uses (6R)-L-erythro-5,6,7,8-tetrahydrobiopterin (BH4) as the physiological electron donor.
Probab=35.79 E-value=24 Score=26.65 Aligned_cols=16 Identities=19% Similarity=0.306 Sum_probs=12.3
Q ss_pred CCccccccChhhHHHHH
Q 025845 227 SRRAFFLYHNTLFIQFV 243 (247)
Q Consensus 227 ~gH~~~~e~p~~~~~~v 243 (247)
-||+|++.+| .|++.+
T Consensus 116 fGHvPmL~~p-~fAdf~ 131 (228)
T cd03348 116 FGHVPMLTNP-VFADFM 131 (228)
T ss_pred hcccHhhcCH-HHHHHH
Confidence 5999999999 455544
No 399
>PF15566 Imm18: Immunity protein 18
Probab=35.79 E-value=52 Score=18.33 Aligned_cols=30 Identities=13% Similarity=0.162 Sum_probs=25.0
Q ss_pred HHHhHHHHHHHHHhCCCCCcEEEEEEehhHH
Q 025845 60 FHAYSEPLMEVLASLPAEEKVILVGHSLGGV 90 (247)
Q Consensus 60 ~~~~~~~l~~~i~~l~~~~~~~lvGhS~Gg~ 90 (247)
+..+++++..+.... ..+..++.--||||.
T Consensus 4 L~~L~~~l~~L~~~~-~~~H~Hlmtp~WgG~ 33 (52)
T PF15566_consen 4 LELLQDQLENLQEKE-PFDHEHLMTPDWGGE 33 (52)
T ss_pred HHHHHHHHHHHHhcc-CCCCceecccccccc
Confidence 556778888888877 678999999999995
No 400
>PRK04148 hypothetical protein; Provisional
Probab=35.78 E-value=84 Score=21.61 Aligned_cols=46 Identities=9% Similarity=-0.033 Sum_probs=29.0
Q ss_pred HhHHHHHHHHHhCCCCCcEEEEEEehhHHHHHHHHHhCCCccceEEEEecc
Q 025845 62 AYSEPLMEVLASLPAEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAF 112 (247)
Q Consensus 62 ~~~~~l~~~i~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 112 (247)
++++.+.+.+... ...++..||-..|..+|..++..- ..++.++..
T Consensus 3 ~i~~~l~~~~~~~-~~~kileIG~GfG~~vA~~L~~~G----~~ViaIDi~ 48 (134)
T PRK04148 3 TIAEFIAENYEKG-KNKKIVELGIGFYFKVAKKLKESG----FDVIVIDIN 48 (134)
T ss_pred HHHHHHHHhcccc-cCCEEEEEEecCCHHHHHHHHHCC----CEEEEEECC
Confidence 3444444444333 346799999998888888888532 356666654
No 401
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3. PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=35.70 E-value=69 Score=24.69 Aligned_cols=22 Identities=18% Similarity=0.310 Sum_probs=18.4
Q ss_pred cEEEEEEehhHHHHHHHHHhCC
Q 025845 79 KVILVGHSLGGVTLALAADKFP 100 (247)
Q Consensus 79 ~~~lvGhS~Gg~ia~~~a~~~p 100 (247)
.-.++|-|.|+.++..++...+
T Consensus 33 ~~~i~GtSAGAl~aa~~asg~~ 54 (252)
T cd07221 33 ARMFFGASAGALHCVTFLSGLP 54 (252)
T ss_pred CCEEEEEcHHHHHHHHHHhCCC
Confidence 4469999999999999987654
No 402
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=35.60 E-value=69 Score=24.65 Aligned_cols=22 Identities=18% Similarity=0.129 Sum_probs=18.3
Q ss_pred cEEEEEEehhHHHHHHHHHhCC
Q 025845 79 KVILVGHSLGGVTLALAADKFP 100 (247)
Q Consensus 79 ~~~lvGhS~Gg~ia~~~a~~~p 100 (247)
.-.++|-|.|+.++..++...+
T Consensus 37 ~~~i~G~SAGAl~aa~~a~g~~ 58 (249)
T cd07220 37 ARKIYGASAGALTATALVTGVC 58 (249)
T ss_pred CCeEEEEcHHHHHHHHHHcCCC
Confidence 4568899999999999887654
No 403
>PRK11320 prpB 2-methylisocitrate lyase; Provisional
Probab=35.40 E-value=2.3e+02 Score=22.55 Aligned_cols=66 Identities=9% Similarity=0.272 Sum_probs=45.0
Q ss_pred cCCCCChhhHHHHHHHHHhCCcEEEEe-cCCC---CCCCCCcccCccCHHHhHHHHHHHHHhCCCCCcEEEEEE
Q 025845 16 HGVNHGAWCWYKLKARLVAGGHRVTAV-DLAA---SGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGH 85 (247)
Q Consensus 16 hG~~~~~~~~~~~~~~l~~~g~~vi~~-D~~G---~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~lvGh 85 (247)
.|++ +.......+..+.+.|..-+.+ |..+ +|..... ...+.+++++.|....+.. ...++.+++=
T Consensus 87 ~GyG-~~~~v~r~V~~~~~aGaagi~IEDq~~pK~cg~~~~~--~lv~~ee~~~kI~Aa~~a~-~~~d~~IiAR 156 (292)
T PRK11320 87 TGFG-GAFNIARTVKSMIKAGAAAVHIEDQVGAKRCGHRPNK--EIVSQEEMVDRIKAAVDAR-TDPDFVIMAR 156 (292)
T ss_pred CCCC-CHHHHHHHHHHHHHcCCeEEEEecCCCccccCCCCCC--cccCHHHHHHHHHHHHHhc-cCCCeEEEEe
Confidence 4555 6667677777787788776666 7652 3433322 2468999999999999887 4566777653
No 404
>PF03490 Varsurf_PPLC: Variant-surface-glycoprotein phospholipase C; InterPro: IPR003633 Variant-surface-glycoprotein phospholipase C, by hydrolysis of the attached glycolipid, releases soluble variant surface glycoprotein containing phosphoinositol from the cell wall after lysis. It catalyses the conversion of variant-surface-glycoprotein 1,2 didecanoyl-SN-phosphatidylinositol and water to 1,2-didecanoylglycerol and the soluble variant-surface-glycoprotein. It also cleaves similar membrane anchors on some mammalian proteins.; GO: 0047396 glycosylphosphatidylinositol diacylglycerol-lyase activity, 0006650 glycerophospholipid metabolic process
Probab=35.28 E-value=51 Score=18.06 Aligned_cols=26 Identities=12% Similarity=0.244 Sum_probs=23.1
Q ss_pred cCHHHhHHHHHHHHHhCCCCCcEEEEE
Q 025845 58 HTFHAYSEPLMEVLASLPAEEKVILVG 84 (247)
Q Consensus 58 ~~~~~~~~~l~~~i~~l~~~~~~~lvG 84 (247)
+..+.|-.|+...|..+ .+..+.++|
T Consensus 6 w~PqSWM~DLrS~I~~~-~I~ql~ipG 31 (51)
T PF03490_consen 6 WHPQSWMSDLRSSIGEM-AITQLFIPG 31 (51)
T ss_pred cCcHHHHHHHHHHHhcc-eeeeEEecc
Confidence 67888999999999999 788888887
No 405
>PLN00179 acyl- [acyl-carrier protein] desaturase
Probab=35.21 E-value=41 Score=27.53 Aligned_cols=62 Identities=19% Similarity=0.135 Sum_probs=46.5
Q ss_pred ecCCCCCCCCCcc-------------cCccCHHHhHHHHHHHHHhCCCCCcEEEEEEehhHHHHHHHHHhCCCccceE
Q 025845 42 VDLAASGINMKRI-------------EDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGVTLALAADKFPHKISVA 106 (247)
Q Consensus 42 ~D~~G~G~S~~~~-------------~~~~~~~~~~~~l~~~i~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~l 106 (247)
+.+||++-.++.. ...|+..++++.+..++... ++.+. -|.|-=|-=|..+....|.|+.++
T Consensus 288 i~MPa~~m~dg~d~~lF~~fsavaqr~GVYt~~dy~dIl~~lv~~W-~v~~l--~gLs~eg~kArd~l~~l~~rirr~ 362 (390)
T PLN00179 288 ITMPAHLMYDGRDDNLFDHFSAVAQRLGVYTAKDYADILEHLVRRW-KVEEL--TGLSGEGRRAQDYVCGLPPRIRRL 362 (390)
T ss_pred CCCCcccCCCCCcchHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhc-CcCcc--cCCCHHHHHHHHHHHHhHHHHHHH
Confidence 7888888776322 24689999997777888888 66555 588888888999988887765543
No 406
>TIGR01120 rpiB ribose 5-phosphate isomerase B. Involved in the non-oxidative branch of the pentose phospate pathway.
Probab=34.85 E-value=1.6e+02 Score=20.55 Aligned_cols=64 Identities=20% Similarity=0.285 Sum_probs=38.1
Q ss_pred HHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCCc-EEEEEEehhHHHHHHHHHhCCC
Q 025845 26 YKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEK-VILVGHSLGGVTLALAADKFPH 101 (247)
Q Consensus 26 ~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~-~~lvGhS~Gg~ia~~~a~~~p~ 101 (247)
+.+.+.|.++||.|+-+-- + + . +..++.+++..+.+.+..- ..+. +.++|.-+|-.++ |.++|.
T Consensus 15 ~~l~~~L~~~g~eV~D~G~--~---~--~-~~~dYpd~a~~va~~V~~~-~~~~GIliCGtGiG~sia---ANK~~G 79 (143)
T TIGR01120 15 EEIKAFLVERGVKVIDKGT--W---S--S-ERTDYPHYAKQVALAVAGG-EVDGGILICGTGIGMSIA---ANKFAG 79 (143)
T ss_pred HHHHHHHHHCCCEEEEeCC--C---C--C-CCCCHHHHHHHHHHHHHCC-CCceEEEEcCCcHHHHHH---HhcCCC
Confidence 4667888889998854321 1 1 1 1257889999998877654 3333 4444555554332 445554
No 407
>PRK10751 molybdopterin-guanine dinucleotide biosynthesis protein B; Provisional
Probab=34.74 E-value=1.5e+02 Score=21.41 Aligned_cols=43 Identities=14% Similarity=0.087 Sum_probs=30.8
Q ss_pred CCcEEEEEcCCCCChhh--HHHHHHHHHhCCcEEEEecCCCCCCC
Q 025845 8 EEKHFVLVHGVNHGAWC--WYKLKARLVAGGHRVTAVDLAASGIN 50 (247)
Q Consensus 8 ~~~~iv~lhG~~~~~~~--~~~~~~~l~~~g~~vi~~D~~G~G~S 50 (247)
..++|+-+=|..++... -..++..|..+|++|-.+-..|||..
T Consensus 4 ~~~~ii~ivG~sgsGKTTLi~~li~~l~~~g~~vg~Ik~~~~~~~ 48 (173)
T PRK10751 4 TMIPLLAIAAWSGTGKTTLLKKLIPALCARGIRPGLIKHTHHDMD 48 (173)
T ss_pred CCceEEEEECCCCChHHHHHHHHHHHHhhcCCeEEEEEEcCCCcc
Confidence 35667777787766554 37888889877888877776677643
No 408
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=34.61 E-value=32 Score=27.28 Aligned_cols=17 Identities=24% Similarity=0.243 Sum_probs=14.9
Q ss_pred EEEEEehhHHHHHHHHH
Q 025845 81 ILVGHSLGGVTLALAAD 97 (247)
Q Consensus 81 ~lvGhS~Gg~ia~~~a~ 97 (247)
.++|.|.||.+|+.++.
T Consensus 44 li~GTStGgiiA~~la~ 60 (308)
T cd07211 44 YICGVSTGAILAFLLGL 60 (308)
T ss_pred EEEecChhHHHHHHHhc
Confidence 47799999999999885
No 409
>CHL00175 minD septum-site determining protein; Validated
Probab=34.54 E-value=1.1e+02 Score=23.68 Aligned_cols=38 Identities=18% Similarity=0.143 Sum_probs=28.7
Q ss_pred CCcEEEEEcCCCCChhh--HHHHHHHHHhCCcEEEEecCC
Q 025845 8 EEKHFVLVHGVNHGAWC--WYKLKARLVAGGHRVTAVDLA 45 (247)
Q Consensus 8 ~~~~iv~lhG~~~~~~~--~~~~~~~l~~~g~~vi~~D~~ 45 (247)
.+..|.+..|-||.... -..++..|++.|++|+.+|.=
T Consensus 14 ~~~vi~v~s~KGGvGKTt~a~nLA~~La~~g~~vlliD~D 53 (281)
T CHL00175 14 MSRIIVITSGKGGVGKTTTTANLGMSIARLGYRVALIDAD 53 (281)
T ss_pred CceEEEEEcCCCCCcHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 34577888877776554 357778888889999999873
No 410
>PRK07933 thymidylate kinase; Validated
Probab=34.48 E-value=1.3e+02 Score=22.40 Aligned_cols=39 Identities=23% Similarity=0.323 Sum_probs=28.4
Q ss_pred EEEEcCCCCCh--hhHHHHHHHHHhCCcEEEEecCCCCCCC
Q 025845 12 FVLVHGVNHGA--WCWYKLKARLVAGGHRVTAVDLAASGIN 50 (247)
Q Consensus 12 iv~lhG~~~~~--~~~~~~~~~l~~~g~~vi~~D~~G~G~S 50 (247)
+|-+=|.-|+. ..-..+.+.|..+|+.|+....|++|.+
T Consensus 2 ~IviEG~dGsGKST~~~~L~~~L~~~g~~v~~~~~P~~~~~ 42 (213)
T PRK07933 2 LIAIEGVDGAGKRTLTEALRAALEARGRSVATLAFPRYGRS 42 (213)
T ss_pred EEEEEcCCCCCHHHHHHHHHHHHHHCCCeEEEEecCCCCCC
Confidence 34455664443 3467888999889999999999977744
No 411
>PRK14483 DhaKLM operon coactivator DhaQ; Provisional
Probab=34.26 E-value=1.3e+02 Score=24.40 Aligned_cols=35 Identities=17% Similarity=0.295 Sum_probs=27.0
Q ss_pred CCcEEEEEcCCCCChhh-----HHHHHHHHHhCCcEEEEe
Q 025845 8 EEKHFVLVHGVNHGAWC-----WYKLKARLVAGGHRVTAV 42 (247)
Q Consensus 8 ~~~~iv~lhG~~~~~~~-----~~~~~~~l~~~g~~vi~~ 42 (247)
....+|++.|+++++.. ++.+.+.|.++|+.|...
T Consensus 251 gd~v~vlVN~LG~ts~~El~i~~~~v~~~L~~~gi~v~r~ 290 (329)
T PRK14483 251 GDNFILLINGLGATTLMEQYIFANDIRRLLELEGLQITFV 290 (329)
T ss_pred CCeEEEEEeCCCCCcHHHHHHHHHHHHHHHHHCCCEEEEe
Confidence 34689999999998754 678888898788776543
No 412
>cd00361 arom_aa_hydroxylase Biopterin-dependent aromatic amino acid hydroxylase; a family of non-heme, iron(II)-dependent enzymes that includes prokaryotic and eukaryotic phenylalanine-4-hydroxylase (PheOH), eukaryotic tyrosine hydroxylase (TyrOH) and eukaryotic tryptophan hydroxylase (TrpOH). PheOH converts L-phenylalanine to L-tyrosine, an important step in phenylalanine catabolism and neurotransmitter biosynthesis, and is linked to a severe variant of phenylketonuria in humans. TyrOH and TrpOH are involved in the biosynthesis of catecholamine and serotonin, respectively. The eukaryotic enzymes are all homotetramers.
Probab=34.18 E-value=27 Score=26.25 Aligned_cols=16 Identities=19% Similarity=0.156 Sum_probs=12.2
Q ss_pred CCccccccChhhHHHHH
Q 025845 227 SRRAFFLYHNTLFIQFV 243 (247)
Q Consensus 227 ~gH~~~~e~p~~~~~~v 243 (247)
-||+|++.+| .|++.+
T Consensus 110 ~GH~P~L~~p-~fAdf~ 125 (221)
T cd00361 110 FGHVPLLADP-SFADFS 125 (221)
T ss_pred hccchhhcCH-HHHHHH
Confidence 5999999999 455543
No 413
>PRK10431 N-acetylmuramoyl-l-alanine amidase II; Provisional
Probab=34.01 E-value=1.1e+02 Score=26.06 Aligned_cols=36 Identities=19% Similarity=0.065 Sum_probs=21.8
Q ss_pred EEEEecCCCCCCCCCcccC--ccC----HHHhHHHHHHHHHhC
Q 025845 38 RVTAVDLAASGINMKRIED--VHT----FHAYSEPLMEVLASL 74 (247)
Q Consensus 38 ~vi~~D~~G~G~S~~~~~~--~~~----~~~~~~~l~~~i~~l 74 (247)
-+|++| ||||..++-... ... .-+++..+.+.|+..
T Consensus 192 ~vIvID-pGHGG~DpGA~g~~G~~EKdv~L~iA~~L~~~L~~~ 233 (445)
T PRK10431 192 VIIAID-AGHGGQDPGAIGPGGTREKNVTIAIARKLRTLLNDD 233 (445)
T ss_pred eEEEEe-CCCCCCCCCCcCCCCccHHHHHHHHHHHHHHHHHhC
Confidence 489999 999998754321 112 223456666666654
No 414
>PRK11468 dihydroxyacetone kinase subunit DhaK; Provisional
Probab=33.90 E-value=1.2e+02 Score=24.72 Aligned_cols=33 Identities=15% Similarity=0.321 Sum_probs=25.7
Q ss_pred CcEEEEEcCCCCChhh-----HHHHHHHHHhCCcEEEE
Q 025845 9 EKHFVLVHGVNHGAWC-----WYKLKARLVAGGHRVTA 41 (247)
Q Consensus 9 ~~~iv~lhG~~~~~~~-----~~~~~~~l~~~g~~vi~ 41 (247)
...+|++.|+++++.. ++.+.+.|.++|..|..
T Consensus 276 d~v~vLVNgLG~t~~~El~i~~~~v~~~L~~~gi~v~r 313 (356)
T PRK11468 276 DRVIALVNNLGATPLSELYGVYNRLATRCEQAGLTIER 313 (356)
T ss_pred CeEEEEEeCCCCCCHHHHHHHHHHHHHHHHHCCCEEEE
Confidence 3689999999998754 57788888878876554
No 415
>TIGR03586 PseI pseudaminic acid synthase.
Probab=33.88 E-value=2.6e+02 Score=22.69 Aligned_cols=80 Identities=14% Similarity=0.055 Sum_probs=47.7
Q ss_pred CCCcEEEEEcCCCCChhhHHHHHHHHHhCCc-EEEEecCCCCCCCCCccc-CccCHHHhHHHHHHHHHhCCCCCcEEEEE
Q 025845 7 MEEKHFVLVHGVNHGAWCWYKLKARLVAGGH-RVTAVDLAASGINMKRIE-DVHTFHAYSEPLMEVLASLPAEEKVILVG 84 (247)
Q Consensus 7 ~~~~~iv~lhG~~~~~~~~~~~~~~l~~~g~-~vi~~D~~G~G~S~~~~~-~~~~~~~~~~~l~~~i~~l~~~~~~~lvG 84 (247)
..+.||++--|. ++...|...++.+.+.|. .|+... .-|.-|.+ ...++. .+ ..++...+ -++-+..
T Consensus 132 ~~gkPvilstG~-~t~~Ei~~Av~~i~~~g~~~i~Llh----C~s~YP~~~~~~nL~----~i-~~lk~~f~-~pVG~SD 200 (327)
T TIGR03586 132 KTGKPIIMSTGI-ATLEEIQEAVEACREAGCKDLVLLK----CTSSYPAPLEDANLR----TI-PDLAERFN-VPVGLSD 200 (327)
T ss_pred hcCCcEEEECCC-CCHHHHHHHHHHHHHCCCCcEEEEe----cCCCCCCCcccCCHH----HH-HHHHHHhC-CCEEeeC
Confidence 456789999998 689999999999987776 455544 12322221 111222 12 22332212 3677889
Q ss_pred EehhHHHHHHHHH
Q 025845 85 HSLGGVTLALAAD 97 (247)
Q Consensus 85 hS~Gg~ia~~~a~ 97 (247)
|+.|-.+++.+..
T Consensus 201 Ht~G~~~~~aAva 213 (327)
T TIGR03586 201 HTLGILAPVAAVA 213 (327)
T ss_pred CCCchHHHHHHHH
Confidence 9999666555443
No 416
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=33.86 E-value=68 Score=24.59 Aligned_cols=18 Identities=22% Similarity=0.265 Sum_probs=16.0
Q ss_pred EEEEEEehhHHHHHHHHH
Q 025845 80 VILVGHSLGGVTLALAAD 97 (247)
Q Consensus 80 ~~lvGhS~Gg~ia~~~a~ 97 (247)
-.++|-|.|+.++..++.
T Consensus 33 ~~i~GtSaGAl~aa~~a~ 50 (246)
T cd07222 33 KRFAGASAGSLVAAVLLT 50 (246)
T ss_pred CEEEEECHHHHHHHHHhc
Confidence 379999999999999984
No 417
>PRK12595 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Reviewed
Probab=33.84 E-value=2.7e+02 Score=22.92 Aligned_cols=75 Identities=13% Similarity=0.096 Sum_probs=44.9
Q ss_pred CCCcEEEEEcCCCCChhhHHHHHHHHHhCCc-EEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCCcEEE-EE
Q 025845 7 MEEKHFVLVHGVNHGAWCWYKLKARLVAGGH-RVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVIL-VG 84 (247)
Q Consensus 7 ~~~~~iv~lhG~~~~~~~~~~~~~~l~~~g~-~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~l-vG 84 (247)
..+.||++--|..++.+.|..-++.+...|. .++.. .||. |.-+.....+. ....+..+-+.. + -++.+ ..
T Consensus 223 ~~gkPVilk~G~~~t~~e~~~Ave~i~~~Gn~~i~L~-erg~--s~yp~~~~~~l--dl~~i~~lk~~~-~-~PV~~d~~ 295 (360)
T PRK12595 223 RVNKPVLLKRGLSATIEEFIYAAEYIMSQGNGQIILC-ERGI--RTYEKATRNTL--DISAVPILKQET-H-LPVMVDVT 295 (360)
T ss_pred ccCCcEEEeCCCCCCHHHHHHHHHHHHHCCCCCEEEE-CCcc--CCCCCCCCCCc--CHHHHHHHHHHh-C-CCEEEeCC
Confidence 4577999999999999999999999987776 34443 3443 33222111122 122222222222 2 26777 79
Q ss_pred Eehh
Q 025845 85 HSLG 88 (247)
Q Consensus 85 hS~G 88 (247)
||.|
T Consensus 296 Hs~G 299 (360)
T PRK12595 296 HSTG 299 (360)
T ss_pred CCCc
Confidence 9987
No 418
>TIGR01119 lacB galactose-6-phosphate isomerase, LacB subunit. This family contains four members from low GC gram-positive bacteria. Galactose-6-phosphate isomerase is involved in lactose catabolism by the tagatose-6-phosphate pathway.
Probab=33.78 E-value=1.8e+02 Score=20.97 Aligned_cols=64 Identities=17% Similarity=0.194 Sum_probs=37.8
Q ss_pred HHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCCcEE-EEEEehhHHHHHHHHHhCCC
Q 025845 26 YKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVI-LVGHSLGGVTLALAADKFPH 101 (247)
Q Consensus 26 ~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~-lvGhS~Gg~ia~~~a~~~p~ 101 (247)
+.+.+.|.++||.|+-+--. +.. ..++.+++..+.+.+..- ..+.-+ ++|.-.|-.+ +|.+.|.
T Consensus 16 ~~l~~~L~~~G~eV~D~G~~-----~~~---~~dYpd~a~~va~~V~~g-~~~~GIliCGTGiG~si---aANKv~G 80 (171)
T TIGR01119 16 MEVSEFLKSKGYEVLDVGTY-----DFT---RTHYPIFGKKVGEAVVSG-EADLGVCICGTGVGINN---AVNKVPG 80 (171)
T ss_pred HHHHHHHHHCCCEEEEeCCC-----CCC---CCChHHHHHHHHHHHHcC-CCCEEEEEcCCcHHHHH---HHhcCCC
Confidence 46778998899998654321 111 247888999888877654 334444 4454444332 2445554
No 419
>PF14252 DUF4347: Domain of unknown function (DUF4347)
Probab=33.74 E-value=98 Score=22.14 Aligned_cols=51 Identities=24% Similarity=0.238 Sum_probs=34.4
Q ss_pred hhHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCCcEEEEEEehhH
Q 025845 23 WCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGG 89 (247)
Q Consensus 23 ~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~lvGhS~Gg 89 (247)
..++.+...+. .+..|+.+|.-. .. .+.+.+.+...++.+.+++++|.--|
T Consensus 10 ~d~~~L~~~l~-~~~~v~~ld~~~-----------d~----~~qI~~~L~~~~~i~~lhivsHG~~G 60 (165)
T PF14252_consen 10 EDYESLLAGLP-PGVEVVILDPSR-----------DG----LEQIAQALAGYQNIDALHIVSHGSPG 60 (165)
T ss_pred CCHHHHHhcCc-CCCEEEEEeCCC-----------ch----HHHHHHHHhcCCCCceEEEEcCCCcc
Confidence 45666777776 578899988331 12 44555556665568999999997555
No 420
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=33.55 E-value=64 Score=25.38 Aligned_cols=20 Identities=20% Similarity=0.200 Sum_probs=16.9
Q ss_pred EEEEEEehhHHHHHHHHHhC
Q 025845 80 VILVGHSLGGVTLALAADKF 99 (247)
Q Consensus 80 ~~lvGhS~Gg~ia~~~a~~~ 99 (247)
-.++|.|.||.+|+.++..+
T Consensus 36 D~i~GTSaGaiia~~la~g~ 55 (288)
T cd07213 36 DLFAGTSAGSLIALGLALGY 55 (288)
T ss_pred eEEEEeCHHHHHHHHHHcCc
Confidence 36789999999999998754
No 421
>PRK14481 dihydroxyacetone kinase subunit DhaK; Provisional
Probab=33.48 E-value=1.2e+02 Score=24.45 Aligned_cols=35 Identities=20% Similarity=0.295 Sum_probs=26.6
Q ss_pred CCcEEEEEcCCCCChhh-----HHHHHHHHHhCCcEEEEe
Q 025845 8 EEKHFVLVHGVNHGAWC-----WYKLKARLVAGGHRVTAV 42 (247)
Q Consensus 8 ~~~~iv~lhG~~~~~~~-----~~~~~~~l~~~g~~vi~~ 42 (247)
....+|++.|+++++.. ++.+.+.|.++|..+...
T Consensus 251 gd~v~lLvN~LG~ts~lEl~i~~~~v~~~L~~~gi~i~r~ 290 (331)
T PRK14481 251 GDEVLVLVNGMGATPLMELYIVYNDVAELLEERGVTVARS 290 (331)
T ss_pred CCeEEEEEeCCCCCcHHHHHHHHHHHHHHHHHCCCEEEEE
Confidence 34689999999998754 678888888778765543
No 422
>cd06570 GH20_chitobiase-like_1 A functionally uncharacterized subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the chitobiase of Serratia marcescens, a beta-N-1,4-acetylhexosaminidase that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This subgroup lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=33.24 E-value=1.5e+02 Score=23.71 Aligned_cols=31 Identities=16% Similarity=0.056 Sum_probs=25.1
Q ss_pred CChhhHHHHHHHHHhCCcEEEE-ecCCCCCCC
Q 025845 20 HGAWCWYKLKARLVAGGHRVTA-VDLAASGIN 50 (247)
Q Consensus 20 ~~~~~~~~~~~~l~~~g~~vi~-~D~~G~G~S 50 (247)
-+......+++.-+++|.+||- +|.|||-.+
T Consensus 65 yT~~di~elv~yA~~rgI~vIPEId~PGH~~a 96 (311)
T cd06570 65 YTQEQIREVVAYARDRGIRVVPEIDVPGHASA 96 (311)
T ss_pred cCHHHHHHHHHHHHHcCCEEEEeecCccchHH
Confidence 4566788888888889999886 999998644
No 423
>PF03405 FA_desaturase_2: Fatty acid desaturase; InterPro: IPR005067 Fatty acid desaturases are enzymes that catalyze the insertion of a double bond at the delta position of fatty acids. There seem to be two distinct families of fatty acid desaturases which do not seem to be evolutionary related. Family 1 is composed of: - Stearoyl-CoA desaturase (SCD) (1.14.19.1 from EC) []. Family 2 is composed of: - Bacterial fatty acid desaturases. - Plant stearoyl-acyl-carrier-protein desaturase (1.14.19.1 from EC) [], this enzyme catalyzes the introduction of a double bond at the delta(9) position of steraoyl-ACP to produce oleoyl-ACP. This enzyme is responsible for the conversion of saturated fatty acids to unsaturated fatty acids in the synthesis of vegetable oils. - Cyanobacterial DesA [], an enzyme that can introduce a second cis double bond at the delta(12) position of fatty acid bound to membranes glycerolipids. DesA is involved in chilling tolerance; the phase transition temperature of lipids of cellular membranes being dependent on the degree of unsaturation of fatty acids of the membrane lipids. This entry contains fatty acid desaturases belonging to Family 2. ; GO: 0045300 acyl-[acyl-carrier-protein] desaturase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 1OQ7_B 1AFR_A 2XZ0_B 1OQB_A 2J2F_E 1OQ4_B 1OQ9_A 2XZ1_A 1ZA0_A.
Probab=33.18 E-value=26 Score=28.12 Aligned_cols=61 Identities=18% Similarity=0.090 Sum_probs=36.2
Q ss_pred ecCCCCCCCCCcc-------------cCccCHHHhHHHHHHHHHhCCCCCcEEEEEEehhHHHHHHHHHhCCCccce
Q 025845 42 VDLAASGINMKRI-------------EDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGVTLALAADKFPHKISV 105 (247)
Q Consensus 42 ~D~~G~G~S~~~~-------------~~~~~~~~~~~~l~~~i~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~ 105 (247)
+.+||++-.++.. ...|+..++++.+..+++.+ ++.+.. |.|-.|-=|..+....|.++++
T Consensus 231 f~MPg~~m~dg~d~~lF~~~~a~~a~~GvY~~~dy~dI~~~l~~~W-~i~~~~--gL~~eg~~Ard~l~~l~~r~~r 304 (330)
T PF03405_consen 231 FRMPGHLMPDGRDPDLFERFSAVAARAGVYTPRDYADILEPLLRRW-KIESRT--GLSGEGEKARDYLCALPARLRR 304 (330)
T ss_dssp ---TTTT---SS-TTHHHHHHHHHHHTTSS-HHHHHHHHHHHHHHT-TGGG----S--HHHHHHHHHHHHHHHHHHH
T ss_pred ccCcchhcccCcchHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHh-ccCccc--CCChHHHHHHHHHHhhHHHHHH
Confidence 6778876554211 14689999998777899999 777766 8888888888887766654433
No 424
>PRK13938 phosphoheptose isomerase; Provisional
Probab=33.10 E-value=1.1e+02 Score=22.56 Aligned_cols=39 Identities=15% Similarity=0.186 Sum_probs=28.2
Q ss_pred CHHHhHHHHHHHHHhCCCCCcEEEEEEehhHHHHHHHHHhCC
Q 025845 59 TFHAYSEPLMEVLASLPAEEKVILVGHSLGGVTLALAADKFP 100 (247)
Q Consensus 59 ~~~~~~~~l~~~i~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p 100 (247)
.+.+.++.+.+.+. ..++++++|..-.|.+|..++.+..
T Consensus 30 ~~~~~a~~~~~~l~---~g~rI~i~G~G~S~~~A~~fa~~L~ 68 (196)
T PRK13938 30 AARAIGDRLIAGYR---AGARVFMCGNGGSAADAQHFAAELT 68 (196)
T ss_pred HHHHHHHHHHHHHH---CCCEEEEEeCcHHHHHHHHHHHHcC
Confidence 34444444444443 5679999999999999999998764
No 425
>TIGR03607 patatin-related protein. This bacterial protein family contains an N-terminal patatin domain, where patatins are plant storage proteins capable of phospholipase activity (see pfam01734). Regions of strong sequence conservation are separated by regions of significant sequence and length variability. Members of the family are distributed sporadically among bacteria. The function is unknown.
Probab=33.07 E-value=65 Score=29.24 Aligned_cols=22 Identities=27% Similarity=0.311 Sum_probs=18.3
Q ss_pred CCCcEEEEEEehhHHHHHHHHH
Q 025845 76 AEEKVILVGHSLGGVTLALAAD 97 (247)
Q Consensus 76 ~~~~~~lvGhS~Gg~ia~~~a~ 97 (247)
+..--+++|.|.||.++..+|.
T Consensus 64 ~~~~d~iaGTSAGAInaa~lA~ 85 (739)
T TIGR03607 64 RVRVDVISGTSAGGINGVLLAY 85 (739)
T ss_pred CCCCceEEeeCHHHHHHHHHHc
Confidence 4566678899999999888885
No 426
>PRK12726 flagellar biosynthesis regulator FlhF; Provisional
Probab=32.95 E-value=3e+02 Score=23.12 Aligned_cols=79 Identities=5% Similarity=-0.075 Sum_probs=47.4
Q ss_pred ChhhHHHHHHHHHh-CCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCCcEEEEEEe-hhHHHHHHHHHh
Q 025845 21 GAWCWYKLKARLVA-GGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHS-LGGVTLALAADK 98 (247)
Q Consensus 21 ~~~~~~~~~~~l~~-~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~lvGhS-~Gg~ia~~~a~~ 98 (247)
+...+...+..+.. .++.+|.+|-+|... .-.++.+++..+.+.. ....++||.-+ +.+.-...++.+
T Consensus 269 dp~dL~~al~~l~~~~~~D~VLIDTAGr~~---------~d~~~l~EL~~l~~~~-~p~~~~LVLsag~~~~d~~~i~~~ 338 (407)
T PRK12726 269 SPAELEEAVQYMTYVNCVDHILIDTVGRNY---------LAEESVSEISAYTDVV-HPDLTCFTFSSGMKSADVMTILPK 338 (407)
T ss_pred CHHHHHHHHHHHHhcCCCCEEEEECCCCCc---------cCHHHHHHHHHHhhcc-CCceEEEECCCcccHHHHHHHHHh
Confidence 45555555555642 468999999998853 2355566677777766 45555666633 333334444444
Q ss_pred CC-CccceEEEE
Q 025845 99 FP-HKISVAVFV 109 (247)
Q Consensus 99 ~p-~~v~~lvl~ 109 (247)
+. -.+.++|+.
T Consensus 339 f~~l~i~glI~T 350 (407)
T PRK12726 339 LAEIPIDGFIIT 350 (407)
T ss_pred cCcCCCCEEEEE
Confidence 43 347888874
No 427
>cd01715 ETF_alpha The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The alpha subunit of ETF is structurally related to the bacterial nitrogen fixation protein fixB which could play a role in a redox process and feed electrons to ferredoxin.
Probab=32.91 E-value=1.8e+02 Score=20.59 Aligned_cols=70 Identities=23% Similarity=0.170 Sum_probs=42.7
Q ss_pred HHHHhCCc-EEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCCcEEEEEEe-hhHHHHHHHHHhCCC-ccceE
Q 025845 30 ARLVAGGH-RVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHS-LGGVTLALAADKFPH-KISVA 106 (247)
Q Consensus 30 ~~l~~~g~-~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~lvGhS-~Gg~ia~~~a~~~p~-~v~~l 106 (247)
..+...|. +|+.++-+.. ..++.+.+++.+.+++++. + ..++|+|+| .|.-++-.+|.+..- .+.-+
T Consensus 45 ~~~~~~Gad~v~~~~~~~~--------~~~~~~~~a~al~~~i~~~-~-p~~Vl~~~t~~g~~la~rlAa~L~~~~vtdv 114 (168)
T cd01715 45 AALKAYGADKVLVAEDPAL--------AHYLAEPYAPALVALAKKE-K-PSHILAGATSFGKDLAPRVAAKLDVGLISDV 114 (168)
T ss_pred HHHHhcCCCEEEEecChhh--------cccChHHHHHHHHHHHHhc-C-CCEEEECCCccccchHHHHHHHhCCCceeeE
Confidence 33333454 6666654321 1368899999999999887 5 466777665 455677777766432 34444
Q ss_pred EEE
Q 025845 107 VFV 109 (247)
Q Consensus 107 vl~ 109 (247)
+-+
T Consensus 115 ~~l 117 (168)
T cd01715 115 TAL 117 (168)
T ss_pred EEE
Confidence 433
No 428
>PF03976 PPK2: Polyphosphate kinase 2 (PPK2); InterPro: IPR022488 This presumed domain is found in one or two copies per protein. The domain is about 230 amino acids in length and has many conserved motifs, it has polyphosphate kinase activity [, ].; PDB: 3CZP_A 3RHF_D 3CZQ_B.
Probab=32.55 E-value=26 Score=26.57 Aligned_cols=71 Identities=23% Similarity=0.220 Sum_probs=42.1
Q ss_pred CcEEEEEcCCCCChh--hHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHH-HHHHHHhCCCCCcEEEEEE
Q 025845 9 EKHFVLVHGVNHGAW--CWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEP-LMEVLASLPAEEKVILVGH 85 (247)
Q Consensus 9 ~~~iv~lhG~~~~~~--~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~-l~~~i~~l~~~~~~~lvGh 85 (247)
.|.||++.|+-++.. .-+.+...|.-+|++|.++.-| +-++...+ +-.+-.+++....+.++=-
T Consensus 30 ~~vlIl~eG~d~sGKg~~I~~l~~~lDPR~~~v~~~~~p-------------t~eE~~~p~lwRfw~~lP~~G~I~if~r 96 (228)
T PF03976_consen 30 IPVLILFEGWDASGKGGTINRLIEWLDPRGFRVHAFGKP-------------TDEELRRPFLWRFWRALPARGQIGIFDR 96 (228)
T ss_dssp HEEEEEEEESTTSSHHHHHHHHHCCS-GGGEEEEE-SS---------------HHHHTS-TTHHHHTTS--TT-EEEEES
T ss_pred CcEEEEEeccccCCchHHHHHHHHhCCCCeeEEEeCCCC-------------ChhHcCCCcHHHHHHhCCCCCEEEEEec
Confidence 468999999976654 4677778887789999999866 22222222 3455667766667777766
Q ss_pred ehhHHHH
Q 025845 86 SLGGVTL 92 (247)
Q Consensus 86 S~Gg~ia 92 (247)
|+=.-+.
T Consensus 97 SWY~~~l 103 (228)
T PF03976_consen 97 SWYEDVL 103 (228)
T ss_dssp -GGGGGT
T ss_pred chhhHHH
Confidence 7655433
No 429
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=32.51 E-value=55 Score=23.17 Aligned_cols=23 Identities=30% Similarity=0.309 Sum_probs=17.9
Q ss_pred CCCcEEEEEEehhHHHHHHHHHh
Q 025845 76 AEEKVILVGHSLGGVTLALAADK 98 (247)
Q Consensus 76 ~~~~~~lvGhS~Gg~ia~~~a~~ 98 (247)
...--.+.|-|.||.+|+.++..
T Consensus 25 ~~~~d~i~GtS~Gal~a~~~~~~ 47 (204)
T PF01734_consen 25 GERFDVISGTSAGALNAALLALG 47 (204)
T ss_dssp CCT-SEEEEECCHHHHHHHHHTC
T ss_pred CCCccEEEEcChhhhhHHHHHhC
Confidence 44556788999999999888865
No 430
>PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2.4.1.13 from EC in the following reaction: UDP-glucose + D-fructose = UDP + sucrose This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family IPR001296 from INTERPRO. This enzyme is found mainly in plants but also appears in bacteria.; GO: 0005985 sucrose metabolic process; PDB: 2R60_A 2R66_A 2R68_A 3S27_G 3S29_A 3S28_A.
Probab=32.48 E-value=85 Score=27.03 Aligned_cols=40 Identities=20% Similarity=0.405 Sum_probs=27.7
Q ss_pred CHHHhHHHHHH-HHHhCCCCCcEEEEEE-ehhHHHHHHHHHhC
Q 025845 59 TFHAYSEPLME-VLASLPAEEKVILVGH-SLGGVTLALAADKF 99 (247)
Q Consensus 59 ~~~~~~~~l~~-~i~~l~~~~~~~lvGh-S~Gg~ia~~~a~~~ 99 (247)
-++++++|+.. +...+ +..+-.++|| |-||.+|..++.+.
T Consensus 382 yLe~fa~d~~~~i~~e~-~~~PdlI~GnYsDgnlvA~LLs~~l 423 (550)
T PF00862_consen 382 YLEEFADDAEREILAEL-QGKPDLIIGNYSDGNLVASLLSRKL 423 (550)
T ss_dssp GHHHHHHHHHHHHHHHH-TS--SEEEEEHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHh-CCCCcEEEeccCcchHHHHHHHhhc
Confidence 46678888874 45666 5667777787 88888888888754
No 431
>TIGR01267 Phe4hydrox_mono phenylalanine-4-hydroxylase, monomeric form. This family is of biopterin and metal-dependent hydroxylases is related to a family of longer, multimeric aromatic amino acid hydroxylases that have additional N-terminal regulatory sequences. These include tyrosine 3-monooxygenase, phenylalanine-4-hydroxylase, and tryptophan 5-monoxygenase.
Probab=32.38 E-value=31 Score=26.39 Aligned_cols=16 Identities=19% Similarity=0.281 Sum_probs=12.2
Q ss_pred CCccccccChhhHHHHH
Q 025845 227 SRRAFFLYHNTLFIQFV 243 (247)
Q Consensus 227 ~gH~~~~e~p~~~~~~v 243 (247)
-||+|++.+| .|++.+
T Consensus 116 fGH~P~L~~P-~FA~f~ 131 (248)
T TIGR01267 116 FGHVPLLTNP-VFADFT 131 (248)
T ss_pred hccccccCCh-HHHHHH
Confidence 5999999999 455544
No 432
>KOG1336 consensus Monodehydroascorbate/ferredoxin reductase [General function prediction only]
Probab=32.34 E-value=1.6e+02 Score=25.18 Aligned_cols=51 Identities=18% Similarity=0.077 Sum_probs=33.3
Q ss_pred CHHHhHHHHHHHHHhCCCCCcEEEEEEehhHHHHHHHHHhCCCccceEEEEecc
Q 025845 59 TFHAYSEPLMEVLASLPAEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAF 112 (247)
Q Consensus 59 ~~~~~~~~l~~~i~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 112 (247)
..-.-++|...++..+.....+.+ +.||.+++++|+..-..-..++++.+-
T Consensus 195 ~~ireieda~~l~~~~~~~~~vV~---vG~G~ig~Evaa~l~~~~~~VT~V~~e 245 (478)
T KOG1336|consen 195 FYLREIEDANRLVAAIQLGGKVVC---VGGGFIGMEVAAALVSKAKSVTVVFPE 245 (478)
T ss_pred eeeccHHHHHHHHHHhccCceEEE---ECchHHHHHHHHHHHhcCceEEEEccC
Confidence 444456777777776633233444 558888888888766667777777764
No 433
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=32.03 E-value=80 Score=30.63 Aligned_cols=31 Identities=32% Similarity=0.448 Sum_probs=23.4
Q ss_pred CHHHhHHHHHHHHHhCCCCCcEEEEEEehhHH
Q 025845 59 TFHAYSEPLMEVLASLPAEEKVILVGHSLGGV 90 (247)
Q Consensus 59 ~~~~~~~~l~~~i~~l~~~~~~~lvGhS~Gg~ 90 (247)
++....=.+.+++..+ ++.+--+||||.|-+
T Consensus 564 sitAiQiaLtDlLs~l-gi~PDGIvGHS~GEl 594 (2376)
T KOG1202|consen 564 SITAIQIALTDLLSCL-GIRPDGIVGHSLGEL 594 (2376)
T ss_pred HHHHHHHHHHHHHHhc-CCCCCcccccccchh
Confidence 3444445566788888 899999999999854
No 434
>PRK13054 lipid kinase; Reviewed
Probab=31.96 E-value=2.6e+02 Score=22.11 Aligned_cols=32 Identities=19% Similarity=0.265 Sum_probs=24.7
Q ss_pred CcEEEEEcCCCCChhhHHHHHHHHHhCCcEEE
Q 025845 9 EKHFVLVHGVNHGAWCWYKLKARLVAGGHRVT 40 (247)
Q Consensus 9 ~~~iv~lhG~~~~~~~~~~~~~~l~~~g~~vi 40 (247)
+..+++++|-++....|..+...|.+.|+.+.
T Consensus 4 ~~~~~i~N~~~~~~~~~~~~~~~l~~~g~~~~ 35 (300)
T PRK13054 4 PKSLLILNGKSAGNEELREAVGLLREEGHTLH 35 (300)
T ss_pred ceEEEEECCCccchHHHHHHHHHHHHcCCEEE
Confidence 45678889887777789998888987777643
No 435
>PRK00889 adenylylsulfate kinase; Provisional
Probab=31.75 E-value=1.5e+02 Score=20.92 Aligned_cols=35 Identities=20% Similarity=0.136 Sum_probs=24.2
Q ss_pred cEEEEEcCCCCChhh--HHHHHHHHHhCCcEEEEecC
Q 025845 10 KHFVLVHGVNHGAWC--WYKLKARLVAGGHRVTAVDL 44 (247)
Q Consensus 10 ~~iv~lhG~~~~~~~--~~~~~~~l~~~g~~vi~~D~ 44 (247)
+.++.+.|..|+... -..++..+...|+.++.+|-
T Consensus 4 g~~i~~~G~~GsGKST~a~~la~~l~~~g~~v~~id~ 40 (175)
T PRK00889 4 GVTVWFTGLSGAGKTTIARALAEKLREAGYPVEVLDG 40 (175)
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEEcC
Confidence 457788898776543 45677777666778877763
No 436
>TIGR00064 ftsY signal recognition particle-docking protein FtsY. There is a weak division between FtsY and SRP54; both are GTPases. In E.coli, ftsY is an essential gene located in an operon with cell division genes ftsE and ftsX, but its apparent function is as the signal recognition particle docking protein.
Probab=31.73 E-value=2.5e+02 Score=21.93 Aligned_cols=69 Identities=19% Similarity=0.166 Sum_probs=38.6
Q ss_pred hCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCC-----CCCcEEEEEEehhHHHHHHHHHhCCC--ccceE
Q 025845 34 AGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLP-----AEEKVILVGHSLGGVTLALAADKFPH--KISVA 106 (247)
Q Consensus 34 ~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~-----~~~~~~lvGhS~Gg~ia~~~a~~~p~--~v~~l 106 (247)
.++|.++.+|-+|.... -..+.+++..+.+... ....++||--+..|.=++.-+..+-+ .+.++
T Consensus 152 ~~~~D~ViIDT~G~~~~---------d~~~~~el~~~~~~~~~~~~~~~~~~~LVl~a~~~~~~~~~~~~f~~~~~~~g~ 222 (272)
T TIGR00064 152 ARNIDVVLIDTAGRLQN---------KVNLMDELKKIKRVIKKVDKDAPDEVLLVLDATTGQNALEQAKVFNEAVGLTGI 222 (272)
T ss_pred HCCCCEEEEeCCCCCcc---------hHHHHHHHHHHHHHHhcccCCCCceEEEEEECCCCHHHHHHHHHHHhhCCCCEE
Confidence 36899999999998642 2333444444443331 24556666555555544444443322 36788
Q ss_pred EEEec
Q 025845 107 VFVTA 111 (247)
Q Consensus 107 vl~~~ 111 (247)
|+.--
T Consensus 223 IlTKl 227 (272)
T TIGR00064 223 ILTKL 227 (272)
T ss_pred EEEcc
Confidence 87543
No 437
>COG4088 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=31.67 E-value=60 Score=24.45 Aligned_cols=34 Identities=15% Similarity=0.193 Sum_probs=26.9
Q ss_pred EEEEEcCCCCChhh-H-HHHHHHHHhCCcEEEEecC
Q 025845 11 HFVLVHGVNHGAWC-W-YKLKARLVAGGHRVTAVDL 44 (247)
Q Consensus 11 ~iv~lhG~~~~~~~-~-~~~~~~l~~~g~~vi~~D~ 44 (247)
|+|++-|.+++... + ..++..|.+++++|+...-
T Consensus 2 pLiIlTGyPgsGKTtfakeLak~L~~~i~~vi~l~k 37 (261)
T COG4088 2 PLIILTGYPGSGKTTFAKELAKELRQEIWRVIHLEK 37 (261)
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHhhhhccccch
Confidence 68899999887654 4 6888899888888887654
No 438
>PRK05406 LamB/YcsF family protein; Provisional
Probab=31.62 E-value=2.1e+02 Score=22.07 Aligned_cols=55 Identities=11% Similarity=-0.043 Sum_probs=35.9
Q ss_pred cCCCCChhhHHHHHHHHHhCCcEEEE----ecCCCCCCCCCcccCccCHHHhHHHHHHHHHhC
Q 025845 16 HGVNHGAWCWYKLKARLVAGGHRVTA----VDLAASGINMKRIEDVHTFHAYSEPLMEVLASL 74 (247)
Q Consensus 16 hG~~~~~~~~~~~~~~l~~~g~~vi~----~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l 74 (247)
-|-.|+.......+..-.++|..|=+ +|+.|||+..-. .+.+++.+.+...+..|
T Consensus 37 G~HAGDp~~M~~tv~lA~~~gV~IGAHPgypD~~gFGRR~m~----~s~~el~~~v~yQigAL 95 (246)
T PRK05406 37 GFHAGDPAVMRRTVRLAKENGVAIGAHPGYPDLEGFGRRNMD----LSPEELYALVLYQIGAL 95 (246)
T ss_pred cccCCCHHHHHHHHHHHHHcCCeEccCCCCCccCCCCCCCCC----CCHHHHHHHHHHHHHHH
Confidence 34467888888887766666655444 899999988754 35555555555444443
No 439
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=31.58 E-value=49 Score=34.76 Aligned_cols=29 Identities=21% Similarity=0.293 Sum_probs=23.7
Q ss_pred HHHHHHhCCCCCcEEEEEEehhHHHHHHHH
Q 025845 67 LMEVLASLPAEEKVILVGHSLGGVTLALAA 96 (247)
Q Consensus 67 l~~~i~~l~~~~~~~lvGhS~Gg~ia~~~a 96 (247)
+.+++..+ ++++-.++|||+|=+.|+.+|
T Consensus 664 l~~lL~~~-Gi~Pd~v~GHSlGE~aAa~aA 692 (2582)
T TIGR02813 664 QYKLFTQA-GFKADMTAGHSFGELSALCAA 692 (2582)
T ss_pred HHHHHHHc-CCccceeecCCHHHHHHHHHh
Confidence 34566777 888999999999998888766
No 440
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=31.48 E-value=2.9e+02 Score=22.59 Aligned_cols=35 Identities=23% Similarity=0.336 Sum_probs=22.3
Q ss_pred CcEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEecCCC
Q 025845 9 EKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAA 46 (247)
Q Consensus 9 ~~~iv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G 46 (247)
+..|++. |..| ..=..++..|.++||+|+++|.+.
T Consensus 21 ~~~IlVt-GgtG--fIG~~l~~~L~~~G~~V~~v~r~~ 55 (370)
T PLN02695 21 KLRICIT-GAGG--FIASHIARRLKAEGHYIIASDWKK 55 (370)
T ss_pred CCEEEEE-CCcc--HHHHHHHHHHHhCCCEEEEEEecc
Confidence 3455555 3333 233456677877899999999754
No 441
>TIGR00632 vsr DNA mismatch endonuclease Vsr. All proteins in this family for which functions are known are G:T mismatch endonucleases that function in a specialized mismatch repair process used usually to repair G:T mismatches in specific sections of the genome. This family was based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). Members of this family typically are found near to a DNA cytosine methyltransferase.
Probab=31.43 E-value=1.4e+02 Score=19.99 Aligned_cols=14 Identities=43% Similarity=0.480 Sum_probs=10.8
Q ss_pred HHHHHhCCcEEEEe
Q 025845 29 KARLVAGGHRVTAV 42 (247)
Q Consensus 29 ~~~l~~~g~~vi~~ 42 (247)
...|.+.|++|+.+
T Consensus 100 ~~~L~~~Gw~Vlr~ 113 (117)
T TIGR00632 100 NSRLQELGWRVLRV 113 (117)
T ss_pred HHHHHHCcCEEEEE
Confidence 35677789999876
No 442
>PF09370 TIM-br_sig_trns: TIM-barrel signal transduction protein; InterPro: IPR009215 Members of this family are predicted to have a TIM barrel fold, based on PSI-BLAST analysis (iteration 4) and on SCOP prediction (using SMART). Interestingly, this novel domain also exists as an N-terminal domain of sigma54-dependent transcriptional activators (enhancer-binding proteins). Because sigma54 dependent activators typically have a three-domain structure: the variable N-terminal regulatory (activation) domain involved in signal recognition/receiving, the central AAA-type ATPase domain, and the DNA-binding domain (see PIRSF003187 from PIRSF, PIRSF005263 from PIRSF, PIRSF003184 from PIRSF, PIRSF005263 from PIRSF, IPR014443 from INTERPRO for details), the proteins of the current entry may be predicted to play a role in signal recognition/receiving and signal transduction.; PDB: 2P10_C.
Probab=31.38 E-value=85 Score=24.42 Aligned_cols=79 Identities=13% Similarity=0.190 Sum_probs=40.9
Q ss_pred HHHHHHHhCCcEEEEecCCC-CCCCCCcccCccCHHHhHHHHHHHHHhC-CCCCcEEEEEEehhHHHH----HHHHHhCC
Q 025845 27 KLKARLVAGGHRVTAVDLAA-SGINMKRIEDVHTFHAYSEPLMEVLASL-PAEEKVILVGHSLGGVTL----ALAADKFP 100 (247)
Q Consensus 27 ~~~~~l~~~g~~vi~~D~~G-~G~S~~~~~~~~~~~~~~~~l~~~i~~l-~~~~~~~lvGhS~Gg~ia----~~~a~~~p 100 (247)
..+..+.+.|-.|+++.+-- .|.+..... ..++++.++.+.++.+.. .-.+.++++.| ||-++ ..+..+.-
T Consensus 161 e~A~~M~~AGaDiiv~H~GlT~gG~~Ga~~-~~sl~~a~~~~~~i~~aa~~v~~dii~l~h--GGPI~~p~D~~~~l~~t 237 (268)
T PF09370_consen 161 EQARAMAEAGADIIVAHMGLTTGGSIGAKT-ALSLEEAAERIQEIFDAARAVNPDIIVLCH--GGPIATPEDAQYVLRNT 237 (268)
T ss_dssp HHHHHHHHHT-SEEEEE-SS-----------S--HHHHHHHHHHHHHHHHCC-TT-EEEEE--CTTB-SHHHHHHHHHH-
T ss_pred HHHHHHHHcCCCEEEecCCccCCCCcCccc-cCCHHHHHHHHHHHHHHHHHhCCCeEEEEe--CCCCCCHHHHHHHHhcC
Confidence 45667777889999988733 233333332 368999888888888765 22356777777 88764 23333333
Q ss_pred CccceEEE
Q 025845 101 HKISVAVF 108 (247)
Q Consensus 101 ~~v~~lvl 108 (247)
+-+.+.+-
T Consensus 238 ~~~~Gf~G 245 (268)
T PF09370_consen 238 KGIHGFIG 245 (268)
T ss_dssp TTEEEEEE
T ss_pred CCCCEEec
Confidence 33566654
No 443
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=31.25 E-value=1.8e+02 Score=24.36 Aligned_cols=43 Identities=19% Similarity=0.234 Sum_probs=38.5
Q ss_pred CCcEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEecCCCCCCC
Q 025845 8 EEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGIN 50 (247)
Q Consensus 8 ~~~~iv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S 50 (247)
++.|+|-+-=||-+..+-....+.|.+.||.|+.|.--|.|..
T Consensus 183 ~~kp~I~iTmfGvTTp~V~~~~~~Le~~G~Ev~VFHAtG~GG~ 225 (403)
T PF06792_consen 183 EDKPLIGITMFGVTTPCVDAIRERLEEEGYEVLVFHATGTGGR 225 (403)
T ss_pred CCCcEEEEECCCCcHHHHHHHHHHHHhcCCeEEEEcCCCCchH
Confidence 5567888889999999999999999999999999999999855
No 444
>cd02065 B12-binding_like B12 binding domain (B12-BD). Most of the members bind different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide. This domain is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins. Not all members of this family contain the conserved binding motif.
Probab=31.23 E-value=1.5e+02 Score=19.32 Aligned_cols=33 Identities=12% Similarity=-0.018 Sum_probs=24.7
Q ss_pred EEEEEcCCCCChhhHHHHHHHHHhCCcEEEEec
Q 025845 11 HFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVD 43 (247)
Q Consensus 11 ~iv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D 43 (247)
+|++......+..-...++..+.++|+.+...+
T Consensus 2 ~l~~~~~~~~h~lg~~~~~~~l~~~G~~v~~l~ 34 (125)
T cd02065 2 VLGATVGGDVHDIGKNIVAIALRDNGFEVIDLG 34 (125)
T ss_pred EEEEEcCCchhhHHHHHHHHHHHHCCCEEEEcC
Confidence 566666666666667777788888999998885
No 445
>cd00423 Pterin_binding Pterin binding enzymes. This family includes dihydropteroate synthase (DHPS) and cobalamin-dependent methyltransferases such as methyltetrahydrofolate, corrinoid iron-sulfur protein methyltransferase (MeTr) and methionine synthase (MetH). DHPS, a functional homodimer, catalyzes the condensation of p-aminobenzoic acid (pABA) in the de novo biosynthesis of folate, which is an essential cofactor in both nucleic acid and protein biosynthesis. Prokaryotes (and some lower eukaryotes) must synthesize folate de novo, while higher eukaryotes are able to utilize dietary folate and therefore lack DHPS. Sulfonamide drugs, which are substrate analogs of pABA, target DHPS. Cobalamin-dependent methyltransferases catalyze the transfer of a methyl group via a methyl- cob(III)amide intermediate. These include MeTr, a functional heterodimer, and the folate binding domain of MetH.
Probab=30.99 E-value=1.4e+02 Score=23.06 Aligned_cols=27 Identities=11% Similarity=0.070 Sum_probs=17.7
Q ss_pred hHHHHHHHHHhCC--cEEEEecCCCCCCCC
Q 025845 24 CWYKLKARLVAGG--HRVTAVDLAASGINM 51 (247)
Q Consensus 24 ~~~~~~~~l~~~g--~~vi~~D~~G~G~S~ 51 (247)
.+...++.+.+.| ..=+.+| ||.|...
T Consensus 151 ~~~~~i~~~~~~Gi~~~~IilD-Pg~g~~k 179 (258)
T cd00423 151 FLEERVEAATEAGIPPEDIILD-PGIGFGK 179 (258)
T ss_pred HHHHHHHHHHHcCCCHHHEEEe-CCCCccC
Confidence 3556666676677 4467888 7887543
No 446
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=30.97 E-value=79 Score=19.33 Aligned_cols=24 Identities=29% Similarity=0.360 Sum_probs=18.4
Q ss_pred CCCcEEEEEEehhHHHHHHHHHhC
Q 025845 76 AEEKVILVGHSLGGVTLALAADKF 99 (247)
Q Consensus 76 ~~~~~~lvGhS~Gg~ia~~~a~~~ 99 (247)
+.+++.++|-|-|=.+|..++..+
T Consensus 38 GpK~VLViGaStGyGLAsRIa~aF 61 (78)
T PF12242_consen 38 GPKKVLVIGASTGYGLASRIAAAF 61 (78)
T ss_dssp S-SEEEEES-SSHHHHHHHHHHHH
T ss_pred CCceEEEEecCCcccHHHHHHHHh
Confidence 568999999999998987777654
No 447
>PRK12615 galactose-6-phosphate isomerase subunit LacB; Reviewed
Probab=30.94 E-value=2.1e+02 Score=20.70 Aligned_cols=64 Identities=14% Similarity=0.200 Sum_probs=37.1
Q ss_pred HHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCCcEE-EEEEehhHHHHHHHHHhCCC
Q 025845 26 YKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVI-LVGHSLGGVTLALAADKFPH 101 (247)
Q Consensus 26 ~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~-lvGhS~Gg~ia~~~a~~~p~ 101 (247)
..+.+.|.+.||.|+-+ |. .+. ...++.+++..+.+.+..- ..+.-+ ++|.-.|-.+ +|.+.|.
T Consensus 16 ~~l~~~L~~~G~eV~D~---G~--~~~---~~~dYpd~a~~va~~V~~g-~~d~GIliCGTGiG~si---aANK~~G 80 (171)
T PRK12615 16 MAVSDFLKSKGYDVIDC---GT--YDH---TRTHYPIFGKKVGEAVVNG-QADLGVCICGTGVGINN---AVNKVPG 80 (171)
T ss_pred HHHHHHHHHCCCEEEEc---CC--CCC---CCCChHHHHHHHHHHHHcC-CCCEEEEEcCCcHHHHH---HHhcCCC
Confidence 46778888899988543 21 111 1247888998888877654 334444 4454444332 2445554
No 448
>PLN02752 [acyl-carrier protein] S-malonyltransferase
Probab=30.93 E-value=54 Score=26.49 Aligned_cols=18 Identities=33% Similarity=0.307 Sum_probs=14.9
Q ss_pred EEEEEEehhHHHHHHHHH
Q 025845 80 VILVGHSLGGVTLALAAD 97 (247)
Q Consensus 80 ~~lvGhS~Gg~ia~~~a~ 97 (247)
-.++|||+|=+.|+.++.
T Consensus 126 ~~~~GHSlGE~aA~~~AG 143 (343)
T PLN02752 126 DVCAGLSLGEYTALVFAG 143 (343)
T ss_pred CeeeeccHHHHHHHHHhC
Confidence 467999999998888774
No 449
>cd06292 PBP1_LacI_like_10 Ligand-binding domain of uncharacterized DNA-binding regulatory proteins that are members of the LacI-GalR family of bacterial transcription repressors. This group includes the ligand-binding domain of uncharacterized DNA-binding regulatory proteins that are members of the LacI-GalR family of bacterial transcription repressors. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the sugar-binding domain of ABC-type transport systems that contain the type I periplasmic binding protein-like fold. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding which in turn changes the DNA binding affinity of the repressor.
Probab=30.71 E-value=2.4e+02 Score=21.36 Aligned_cols=57 Identities=14% Similarity=-0.018 Sum_probs=26.0
Q ss_pred HHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCCcEEEEEE
Q 025845 27 KLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGH 85 (247)
Q Consensus 27 ~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~lvGh 85 (247)
..+..+.++|..|+.+|..-.+....+.- ..+....+..+.+.+-.. +.+++.+++.
T Consensus 74 ~~i~~~~~~~ipvV~i~~~~~~~~~~~~V-~~d~~~~~~~~~~~l~~~-g~~~i~~i~~ 130 (273)
T cd06292 74 SHYERLAERGLPVVLVNGRAPPPLKVPHV-STDDALAMRLAVRHLVAL-GHRRIGFASG 130 (273)
T ss_pred HHHHHHHhCCCCEEEEcCCCCCCCCCCEE-EECcHHHHHHHHHHHHHC-CCceEEEEeC
Confidence 33444554667777776432221111100 123444444444444444 5566666643
No 450
>cd06143 PAN2_exo DEDDh 3'-5' exonuclease domain of the eukaryotic exoribonuclease PAN2. PAN2 is the catalytic subunit of poly(A) nuclease (PAN), a Pab1p-dependent 3'-5' exoribonuclease which plays an important role in the posttranscriptional maturation of pre-mRNAs. PAN catalyzes the deadenylation of poly(A) tails, which are initially synthesized to default lengths of 70 to 90, to mRNA-specific lengths of 55 to 71. Pab1p and PAN also play a role in the export and decay of mRNA. PAN2 contains a DEDDh-type DnaQ-like 3'-5' exonuclease domain with three conserved sequence motifs termed ExoI, ExoII and ExoIII, with a specific Hx(4)D conserved pattern at ExoIII. These motifs are clustered around the active site and contain four conserved acidic residues that serve as ligands for the two metal ions required for catalysis.
Probab=30.67 E-value=44 Score=24.13 Aligned_cols=19 Identities=26% Similarity=0.295 Sum_probs=13.1
Q ss_pred CCcEEEEEEehhHHH-HHHH
Q 025845 77 EEKVILVGHSLGGVT-LALA 95 (247)
Q Consensus 77 ~~~~~lvGhS~Gg~i-a~~~ 95 (247)
.+..+|||||+-.=+ ++.+
T Consensus 100 ~~~tILVGHsL~nDL~aL~l 119 (174)
T cd06143 100 DLGCIFVGHGLAKDFRVINI 119 (174)
T ss_pred CCCCEEEeccchhHHHHhcC
Confidence 356799999998843 3443
No 451
>PRK14569 D-alanyl-alanine synthetase A; Provisional
Probab=30.61 E-value=1.4e+02 Score=23.51 Aligned_cols=37 Identities=16% Similarity=0.184 Sum_probs=26.2
Q ss_pred CcEEEEEcCCCCC-----hhhHHHHHHHHHhCCcEEEEecCC
Q 025845 9 EKHFVLVHGVNHG-----AWCWYKLKARLVAGGHRVTAVDLA 45 (247)
Q Consensus 9 ~~~iv~lhG~~~~-----~~~~~~~~~~l~~~g~~vi~~D~~ 45 (247)
+..|.+++|..++ ......+.+.|.+.||+|+.+|.-
T Consensus 3 ~~~i~vl~gg~s~e~~vsl~s~~~v~~aL~~~g~~~~~~~~~ 44 (296)
T PRK14569 3 NEKIVVLYGGDSPEREVSLKSGKAVLDSLISQGYDAVGVDAS 44 (296)
T ss_pred CcEEEEEeCCCCCchHhHHHHHHHHHHHHHHcCCEEEEEcCC
Confidence 4456666664433 234678889998899999999853
No 452
>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=30.61 E-value=1.8e+02 Score=24.98 Aligned_cols=46 Identities=20% Similarity=0.177 Sum_probs=35.4
Q ss_pred CCcCCCCCCcEEEEEcCCCCCh-hhHHHHHHHHHhCCcEEEEecCCC
Q 025845 1 MEEVVGMEEKHFVLVHGVNHGA-WCWYKLKARLVAGGHRVTAVDLAA 46 (247)
Q Consensus 1 ~~~~~~~~~~~iv~lhG~~~~~-~~~~~~~~~l~~~g~~vi~~D~~G 46 (247)
|..-++.+++.||+++=.+.++ .-+-.++..|+.+|++|..+.-+.
T Consensus 1 ~~~~~~~~~~HVvl~PfpaqGHi~P~l~LAk~La~~G~~VTfv~T~~ 47 (477)
T PLN02863 1 MTELNKPAGTHVLVFPFPAQGHMIPLLDLTHRLALRGLTITVLVTPK 47 (477)
T ss_pred CcccccCCCCEEEEecCcccchHHHHHHHHHHHHhCCCEEEEEeCCC
Confidence 6667788889999999876444 448899999988898887766554
No 453
>PRK13936 phosphoheptose isomerase; Provisional
Probab=30.48 E-value=1.6e+02 Score=21.67 Aligned_cols=38 Identities=13% Similarity=0.163 Sum_probs=27.9
Q ss_pred HHHhHHHHHHHHHhCCCCCcEEEEEEehhHHHHHHHHHhCC
Q 025845 60 FHAYSEPLMEVLASLPAEEKVILVGHSLGGVTLALAADKFP 100 (247)
Q Consensus 60 ~~~~~~~l~~~i~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p 100 (247)
+++.++.+.+.+. ..+++.++|..-.+.+|..++.+..
T Consensus 29 i~~a~~~~~~~l~---~a~~I~i~G~G~S~~~A~~~~~~l~ 66 (197)
T PRK13936 29 IAQAVELMVQALL---NEGKILACGNGGSAADAQHFSAELL 66 (197)
T ss_pred HHHHHHHHHHHHH---CCCEEEEEeCcHhHHHHHHHHHHcc
Confidence 4455555555554 5579999999988899999987654
No 454
>PF04763 DUF562: Protein of unknown function (DUF562); InterPro: IPR006850 This represents a conserved region found in a number of Chlamydophila pneumoniae proteins.
Probab=30.29 E-value=1.9e+02 Score=19.99 Aligned_cols=37 Identities=14% Similarity=-0.029 Sum_probs=28.5
Q ss_pred cEEEEEcCCCC----ChhhHHHHHHHHHhCCc---EEEEecCCC
Q 025845 10 KHFVLVHGVNH----GAWCWYKLKARLVAGGH---RVTAVDLAA 46 (247)
Q Consensus 10 ~~iv~lhG~~~----~~~~~~~~~~~l~~~g~---~vi~~D~~G 46 (247)
-.||+.|+.++ ....+..+...|...|| +++.++..|
T Consensus 18 vvVv~~~~~~~~~~l~~~s~~~l~~eL~~~GYSylNIfs~~~~~ 61 (146)
T PF04763_consen 18 VVVVCNHSWPGPESLPPESVSLLIEELEESGYSYLNIFSCSSES 61 (146)
T ss_pred EEEEEeCCcccccCCChHHHHHHHHHHhhcCCceEEEEEEcCCC
Confidence 46788888865 45668999999998887 677787665
No 455
>PRK10115 protease 2; Provisional
Probab=30.26 E-value=1.6e+02 Score=26.61 Aligned_cols=66 Identities=14% Similarity=0.177 Sum_probs=40.8
Q ss_pred CCCCcEEEEEcCCCCChh-hH--HHHHHHHHhCCcE--EEEe---cCCCCCCCCCcccCccCHHHhHHHHHHHHHhC
Q 025845 6 GMEEKHFVLVHGVNHGAW-CW--YKLKARLVAGGHR--VTAV---DLAASGINMKRIEDVHTFHAYSEPLMEVLASL 74 (247)
Q Consensus 6 ~~~~~~iv~lhG~~~~~~-~~--~~~~~~l~~~g~~--vi~~---D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l 74 (247)
+..-|+++++||.-...- .| .+++..|.+.|.. .+.+ .--|||...... ..+.+.|..+.=+++.+
T Consensus 603 ~~~~P~lLi~~g~~D~RV~~~~~~k~~a~Lr~~~~~~~~vl~~~~~~~GHg~~~~r~---~~~~~~A~~~aFl~~~~ 676 (686)
T PRK10115 603 AQAYPHLLVTTGLHDSQVQYWEPAKWVAKLRELKTDDHLLLLCTDMDSGHGGKSGRF---KSYEGVAMEYAFLIALA 676 (686)
T ss_pred ccCCCceeEEecCCCCCcCchHHHHHHHHHHhcCCCCceEEEEecCCCCCCCCcCHH---HHHHHHHHHHHHHHHHh
Confidence 345577889999876542 23 4677778765543 3443 347888443222 36677777777777776
No 456
>PRK14582 pgaB outer membrane N-deacetylase; Provisional
Probab=30.18 E-value=81 Score=28.32 Aligned_cols=77 Identities=13% Similarity=0.036 Sum_probs=46.4
Q ss_pred CCCcEEEEEcCCCC----------ChhhHHHHHHHHHhCCcEEEEecCCC---CCCCCCccc-----CccCHHHhHHHHH
Q 025845 7 MEEKHFVLVHGVNH----------GAWCWYKLKARLVAGGHRVTAVDLAA---SGINMKRIE-----DVHTFHAYSEPLM 68 (247)
Q Consensus 7 ~~~~~iv~lhG~~~----------~~~~~~~~~~~l~~~g~~vi~~D~~G---~G~S~~~~~-----~~~~~~~~~~~l~ 68 (247)
.++-+|++-|.... +...|+.+.+.|.+.||++|.+|--- .|....+.. ....+.+....+.
T Consensus 46 ~~~~~VL~YH~V~d~~~~~~~~~Vspe~Fe~qL~~Lk~nGY~~ISl~el~~~~~g~~~LP~K~VaLTFDDGy~s~yt~A~ 125 (671)
T PRK14582 46 HNGFVAIAYHDVEDEAADQRFMSVRTSALREQFAWLRENGYQPVSVAQILEAHRGGKPLPEKAVLLTFDDGYSSFYTRVF 125 (671)
T ss_pred CCceEEEEeCcccCCcccccccccCHHHHHHHHHHHHHCcCEEccHHHHHHHHhcCCCCCCCeEEEEEEcCCCchHHHHH
Confidence 46679999999853 23468999999999999999988421 121111111 0112223445677
Q ss_pred HHHHhCCCCC-cEEEEE
Q 025845 69 EVLASLPAEE-KVILVG 84 (247)
Q Consensus 69 ~~i~~l~~~~-~~~lvG 84 (247)
-+|++. +.. -+.++|
T Consensus 126 PILkky-gvpATfFlvg 141 (671)
T PRK14582 126 PILQAF-QWPAVWAPVG 141 (671)
T ss_pred HHHHHc-CCCEEEEEec
Confidence 778887 554 333444
No 457
>PLN02735 carbamoyl-phosphate synthase
Probab=30.18 E-value=2e+02 Score=27.84 Aligned_cols=86 Identities=12% Similarity=0.067 Sum_probs=50.7
Q ss_pred CCcEEEEEcCCCC---Chhh--H--HHHHHHHHhCCcEEEEecCCCCCCCCCcc--cCccCHHHhHHHHHHHHHhCCCCC
Q 025845 8 EEKHFVLVHGVNH---GAWC--W--YKLKARLVAGGHRVTAVDLAASGINMKRI--EDVHTFHAYSEPLMEVLASLPAEE 78 (247)
Q Consensus 8 ~~~~iv~lhG~~~---~~~~--~--~~~~~~l~~~g~~vi~~D~~G~G~S~~~~--~~~~~~~~~~~~l~~~i~~l~~~~ 78 (247)
.++-|+++.+.+. ..-. | -..+..|.+.||.+|++|....--|.... +..|-..-..+++.++++.. +.+
T Consensus 573 ~~kkvlilG~G~~~igq~iefd~~~v~~~~alr~~G~~tI~v~~npetvstd~~~aD~~y~~pl~~e~vl~i~~~e-~~d 651 (1102)
T PLN02735 573 NKKKVLILGGGPNRIGQGIEFDYCCCHASFALQDAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLE-RPD 651 (1102)
T ss_pred CCceEEEeCccccccCcccccceeHHHHHHHHHHcCCeEEEEeCCCccccCCcccCCeEEEEeCCHHHHHHHHHHh-CCC
Confidence 3455666655532 1112 2 36678888899999999986554442211 22233444578888888877 433
Q ss_pred cEEEEEEehhHHHHHHHHH
Q 025845 79 KVILVGHSLGGVTLALAAD 97 (247)
Q Consensus 79 ~~~lvGhS~Gg~ia~~~a~ 97 (247)
.|=-++||..++.+|.
T Consensus 652 ---~Vi~~~Ggq~~l~la~ 667 (1102)
T PLN02735 652 ---GIIVQFGGQTPLKLAL 667 (1102)
T ss_pred ---EEEECCCchHHHHHHH
Confidence 3333577766665554
No 458
>PF00809 Pterin_bind: Pterin binding enzyme This Prosite entry is a subset of the Pfam family; InterPro: IPR000489 The ~250-residue pterin-binding domain has been shown to adopt a (beta/alpha)8 barrel fold, which has the overall shape of a distorted cylinder. It has eight alpha-helices stacked around the outside of an inner cylinder of parallel beta-strands. The pterin ring binds at the bottom of the (beta/alpha;)8 barrel in a polar cup-like region that is relatively solvent exposed and fairly negatively charged. The pterin ring is partially buried within the (beta/alpha)8 barrel. The pterin binding residues are highly conserved and include aspartate and asparagine residues located at the C terminus of the beta-strands of the barrel, which are predicted to form hydrogen bonds with the nitrogen and oxygen atoms of the pterin ring [, , ]. Some proteins known to contain a pterin-binding domain are listed below: Prokaryotic and eukaryotic B12-dependent methionine synthase (MetH) (2.1.1.13 from EC), a large, modular protein that catalyzes the transfer of a methyl group from methyltetrahydrofolate (CH3-H4folate) to Hcy to form methionine, using cobalamin as an intermediate methyl carrier. Prokaryotic and eukaryotic dihydropteroate synthase (DHPS) (2.5.1.15 from EC). It catalyzes the condensation of para-aminobenzoic acid (pABA) with 7,8- dihydropterin-pyrophosphate (DHPPP), eliminating pyrophosphate to form 7,8- dihydropteroate which is subsequently converted to tetrahydrofolate. Moorella thermoacetica 5-methyltetrahydrofolate corrinoid/iron sulphur protein methyltransferase (MeTr). It transfers the N5-methyl group from CH3-H4folate to a cob(I)amide centre in another protein, the corrinoid iron sulphur protein. ; GO: 0042558 pteridine-containing compound metabolic process; PDB: 2VP8_B 2BMB_A 2Y5S_B 2Y5J_A 3BOF_B 1Q7Q_B 1Q85_B 1Q7Z_A 1Q7M_A 1Q8A_B ....
Probab=30.16 E-value=1.7e+02 Score=21.83 Aligned_cols=40 Identities=20% Similarity=0.139 Sum_probs=22.3
Q ss_pred CcEEEEEcCCCC------Ch----hhHHHHHHHHHh-------CCc--EEEEecCCCCCC
Q 025845 9 EKHFVLVHGVNH------GA----WCWYKLKARLVA-------GGH--RVTAVDLAASGI 49 (247)
Q Consensus 9 ~~~iv~lhG~~~------~~----~~~~~~~~~l~~-------~g~--~vi~~D~~G~G~ 49 (247)
+.++|++|--+. +. ..+..+...+.+ .|. .=|.+| ||.|.
T Consensus 116 ~~~vV~m~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~i~~l~~~Gi~~~~Ii~D-Pgigf 174 (210)
T PF00809_consen 116 GAPVVLMHSDGNPKGMPETADYRLDIAEEIIEFLEERIEALEKAGIPRERIILD-PGIGF 174 (210)
T ss_dssp TSEEEEESESSETTTTTSSHHHSHSHHHHHHHHHHHHHHHHHHTT--GGGEEEE-TTTTS
T ss_pred CCEEEEEecccccccccccchhhhhHHHHHHHHHHHHHHHHHHcCCCHHHEeec-cccCc
Confidence 346777776521 11 235555555554 566 567778 77776
No 459
>cd06564 GH20_DspB_LnbB-like Glycosyl hydrolase family 20 (GH20) catalytic domain of dispersin B (DspB), lacto-N-biosidase (LnbB) and related proteins. Dispersin B is a soluble beta-N-acetylglucosamidase found in bacteria that hydrolyzes the beta-1,6-linkages of PGA (poly-beta-(1,6)-N-acetylglucosamine), a major component of the extracellular polysaccharide matrix. Lacto-N-biosidase hydrolyzes lacto-N-biose (LNB) type I oligosaccharides at the nonreducing terminus to produce lacto-N-biose as part of the GNB/LNB (galacto-N-biose/lacto-N-biose I) degradation pathway. The lacto-N-biosidase from Bifidobacterium bifidum has this GH20 domain, a carbohydrate binding module 32, and a bacterial immunoglobulin-like domain 2, as well as a YSIRK signal peptide and a G5 membrane anchor at the N and C termini, respectively. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=30.07 E-value=2e+02 Score=23.16 Aligned_cols=31 Identities=13% Similarity=0.077 Sum_probs=24.7
Q ss_pred CChhhHHHHHHHHHhCCcEEEE-ecCCCCCCC
Q 025845 20 HGAWCWYKLKARLVAGGHRVTA-VDLAASGIN 50 (247)
Q Consensus 20 ~~~~~~~~~~~~l~~~g~~vi~-~D~~G~G~S 50 (247)
-+...++.+++.-+++|.+||- +|.|||-.+
T Consensus 79 YT~~di~eiv~yA~~rgI~vIPEID~PGH~~a 110 (326)
T cd06564 79 YTKEEFKELIAYAKDRGVNIIPEIDSPGHSLA 110 (326)
T ss_pred ccHHHHHHHHHHHHHcCCeEeccCCCcHHHHH
Confidence 3566788888888889999886 999999443
No 460
>PF01012 ETF: Electron transfer flavoprotein domain; InterPro: IPR014730 Electron transfer flavoproteins (ETFs) serve as specific electron acceptors for primary dehydrogenases, transferring the electrons to terminal respiratory systems. They can be functionally classified into constitutive, "housekeeping" ETFs, mainly involved in the oxidation of fatty acids (Group I), and ETFs produced by some prokaryotes under specific growth conditions, receiving electrons only from the oxidation of specific substrates (Group II) []. ETFs are heterodimeric proteins composed of an alpha and beta subunit, and contain an FAD cofactor and AMP [, , , , ]. ETF consists of three domains: domains I and II are formed by the N- and C-terminal portions of the alpha subunit, respectively, while domain III is formed by the beta subunit. Domains I and III share an almost identical alpha-beta-alpha sandwich fold, while domain II forms an alpha-beta-alpha sandwich similar to that of bacterial flavodoxins. FAD is bound in a cleft between domains II and III, while domain III binds the AMP molecule. Interactions between domains I and III stabilise the protein, forming a shallow bowl where domain II resides. This entry represents the N-terminal domain of both the alpha and beta subunits from Group I and Group II ETFs.; PDB: 1EFP_B 3FET_B 3IH5_B 2A1T_S 1EFV_B 1T9G_S 2A1U_B 1O96_E 1O94_C 3CLU_C ....
Probab=29.97 E-value=2e+02 Score=20.18 Aligned_cols=61 Identities=21% Similarity=0.270 Sum_probs=39.2
Q ss_pred HHHHHhCCc-EEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCCcEEEEEEeh-hHHHHHHHHHhC
Q 025845 29 KARLVAGGH-RVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSL-GGVTLALAADKF 99 (247)
Q Consensus 29 ~~~l~~~g~-~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~lvGhS~-Gg~ia~~~a~~~ 99 (247)
.+.+...|. +|+.++-+.. ..++.+.+++.+.++++.. +. ..+|+|++- |.-++-.+|.+.
T Consensus 51 ~~~l~~~G~d~v~~~~~~~~--------~~~~~~~~a~~l~~~~~~~-~~-~lVl~~~t~~g~~la~~lA~~L 113 (164)
T PF01012_consen 51 RKALAKYGADKVYHIDDPAL--------AEYDPEAYADALAELIKEE-GP-DLVLFGSTSFGRDLAPRLAARL 113 (164)
T ss_dssp HHHHHSTTESEEEEEE-GGG--------TTC-HHHHHHHHHHHHHHH-T--SEEEEESSHHHHHHHHHHHHHH
T ss_pred hhhhhhcCCcEEEEecCccc--------cccCHHHHHHHHHHHHHhc-CC-CEEEEcCcCCCCcHHHHHHHHh
Confidence 344554565 6888875532 1368889999999999986 43 577777764 445676666653
No 461
>PRK06193 hypothetical protein; Provisional
Probab=29.79 E-value=93 Score=23.20 Aligned_cols=52 Identities=19% Similarity=0.241 Sum_probs=31.9
Q ss_pred cCHHHhHHHHHHHHHhCC-CCCcEEEEEEehhHHHHHHHHHhCCCccceEEEEecc
Q 025845 58 HTFHAYSEPLMEVLASLP-AEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAF 112 (247)
Q Consensus 58 ~~~~~~~~~l~~~i~~l~-~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 112 (247)
.+.+.+.+++.++|+.+. ..+.+.+|||..+= ..++...++.....+++.+.
T Consensus 135 ~~~~~y~~~l~~~I~~l~~~~~~vLlVgHnp~i---~~l~g~~~~~~g~~~~~~~~ 187 (206)
T PRK06193 135 ERNALLKAGLRPLLTTPPDPGTNTVLVGHDDNL---EAATGIYPEPEGEAAVFEPL 187 (206)
T ss_pred hhHHHHHHHHHHHHhhCCCCCCeEEEEeCchHH---HHHhCCCCccCccEEEEEeC
Confidence 456667789999999883 45689999999532 22222333324445555553
No 462
>PRK12613 galactose-6-phosphate isomerase subunit LacA; Provisional
Probab=29.74 E-value=2e+02 Score=20.05 Aligned_cols=54 Identities=13% Similarity=0.137 Sum_probs=34.7
Q ss_pred HHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCCcEEEEEEehhHH
Q 025845 26 YKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGV 90 (247)
Q Consensus 26 ~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~lvGhS~Gg~ 90 (247)
+.+.+.|.+.||.|+-+ |. . ..++.+++..+.+.+..-....-+.++|.-.|-.
T Consensus 16 ~~l~~~L~~~g~eV~D~---G~------~--~~dypd~a~~va~~V~~~e~~~GIliCGtGiG~s 69 (141)
T PRK12613 16 ELIKSFLQEEGYDIIDV---TD------I--NSDFIDNTLAVAKAVNEAEGRLGIMVDAYGAGPF 69 (141)
T ss_pred HHHHHHHHHCCCEEEEc---CC------C--CCChHHHHHHHHHHHHcCCCceEEEEcCCCHhHh
Confidence 46778888899998544 22 1 1578889999988776552233455556555543
No 463
>TIGR00421 ubiX_pad polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases. In E.coli, the protein UbiX (3-octaprenyl-4-hydroxybenzoate carboxy-lyase) has been shown to be involved in the third step of ubiquinone biosynthesis. It catalyzes the reaction [3-octaprenyl-4-hydroxybenzoate = 2-octaprenylphenol + CO2]. The knockout of the homologous protein in yeast confers sensitivity to phenylacrylic acid. Members are not restricted to ubiquinone-synthesizing species. This family represents a distinct clade within the flavoprotein family of Pfam model pfam02441.
Probab=29.66 E-value=2.2e+02 Score=20.66 Aligned_cols=59 Identities=17% Similarity=0.061 Sum_probs=33.9
Q ss_pred CcEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHH-HHHHhC
Q 025845 9 EKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLM-EVLASL 74 (247)
Q Consensus 9 ~~~iv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~-~~i~~l 74 (247)
+.|+++++--......-......|.+.|+.|+-+. +|+-. ...+++++++.+. .+++.+
T Consensus 112 ~~pv~i~P~~m~~~~~~~~Nl~~L~~~G~~ii~P~-~g~~~------~p~~~~~~~~~i~~~~l~~l 171 (181)
T TIGR00421 112 RRKLVLVPRETPLNSIHLENMLRLSRMGAIILPPM-PAFYT------RPKSVEDMIDFIVGRVLDQL 171 (181)
T ss_pred CCCEEEEeCCCcCCHHHHHHHHHHHHCCCEEECCC-CcccC------CCCCHHHHHHHHHHHHHHHc
Confidence 44666666322111222455567777888887665 34311 1248888877776 567777
No 464
>PF03681 UPF0150: Uncharacterised protein family (UPF0150); InterPro: IPR005357 This family of small proteins is uncharacterised. In Q9A3L8 from SWISSPROT this domain is found next to a DNA binding helix-turn-helix domain IPR002145 from INTERPRO, which suggests that this is some kind of ligand binding domain.; PDB: 2DSY_C 2YZT_A 3KWR_A.
Probab=29.49 E-value=75 Score=16.93 Aligned_cols=32 Identities=25% Similarity=0.116 Sum_probs=22.3
Q ss_pred CCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHH
Q 025845 35 GGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLA 72 (247)
Q Consensus 35 ~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~ 72 (247)
.+|.+..+|+||+- .. ..|.++..+.+.+.+.
T Consensus 12 ~~y~~~~pdlpg~~----t~--G~t~eea~~~~~eal~ 43 (48)
T PF03681_consen 12 GGYVAYFPDLPGCF----TQ--GDTLEEALENAKEALE 43 (48)
T ss_dssp SSEEEEETTCCTCE----EE--ESSHHHHHHHHHHHHH
T ss_pred CeEEEEeCCccChh----hc--CCCHHHHHHHHHHHHH
Confidence 57899999999874 11 2477777777766654
No 465
>COG1255 Uncharacterized protein conserved in archaea [Function unknown]
Probab=29.49 E-value=68 Score=21.43 Aligned_cols=23 Identities=26% Similarity=0.436 Sum_probs=19.8
Q ss_pred hHHHHHHHHHhCCcEEEEecCCC
Q 025845 24 CWYKLKARLVAGGHRVTAVDLAA 46 (247)
Q Consensus 24 ~~~~~~~~l~~~g~~vi~~D~~G 46 (247)
.+..++..|+++|+.|++.|.--
T Consensus 24 ~~~~VA~~L~e~g~dv~atDI~~ 46 (129)
T COG1255 24 FFLDVAKRLAERGFDVLATDINE 46 (129)
T ss_pred hHHHHHHHHHHcCCcEEEEeccc
Confidence 47788899999999999999853
No 466
>cd02696 MurNAc-LAA N-acetylmuramoyl-L-alanine amidase or MurNAc-LAA (also known as peptidoglycan aminohydrolase, NAMLA amidase, NAMLAA, Amidase 3, and peptidoglycan amidase; EC 3.5.1.28) is an autolysin that hydrolyzes the amide bond between N-acetylmuramoyl and L-amino acids in certain cell wall glycopeptides. These proteins are Zn-dependent peptidases with highly conserved residues involved in cation co-ordination. MurNAc-LAA in this family is one of several peptidoglycan hydrolases (PGHs) found in bacterial and bacteriophage or prophage genomes that are involved in the degradation of the peptidoglycan. In Escherichia coli, there are five MurNAc-LAAs present: AmiA, AmiB, AmiC and AmiD that are periplasmic, and AmpD that is cytoplasmic. Three of these (AmiA, AmiB and AmiC) belong to this family, the other two (AmiD and AmpD) do not. E. coli AmiA, AmiB and AmiC play an important role in cleaving the septum to release daughter cells after cell division. In general, bacterial MurNAc-LAAs
Probab=29.47 E-value=98 Score=21.91 Aligned_cols=29 Identities=7% Similarity=-0.078 Sum_probs=15.3
Q ss_pred EEecCCCCCCCCCcccCc--cCHHHhHHHHHH
Q 025845 40 TAVDLAASGINMKRIEDV--HTFHAYSEPLME 69 (247)
Q Consensus 40 i~~D~~G~G~S~~~~~~~--~~~~~~~~~l~~ 69 (247)
|++| +|||.+++-.... .+-.++..++..
T Consensus 2 v~ld-~GHg~~~~Ga~~~~g~~E~~~~~~ia~ 32 (172)
T cd02696 2 IVID-PGHGGKDPGAVGNDGLKEKDINLAIAL 32 (172)
T ss_pred EEEe-CCCCCCCCCCcCCCCCchHHHHHHHHH
Confidence 4566 8999886433222 344444444443
No 467
>PTZ00445 p36-lilke protein; Provisional
Probab=29.32 E-value=1.7e+02 Score=22.04 Aligned_cols=68 Identities=19% Similarity=0.111 Sum_probs=36.5
Q ss_pred hhhHHHHHHHHHhCCcEEEEecCCC------CCCCCCcc-cCccCHHHhHHHHHHHHHhC-CCCCcEEEEEEehhH
Q 025845 22 AWCWYKLKARLVAGGHRVTAVDLAA------SGINMKRI-EDVHTFHAYSEPLMEVLASL-PAEEKVILVGHSLGG 89 (247)
Q Consensus 22 ~~~~~~~~~~l~~~g~~vi~~D~~G------~G~S~~~~-~~~~~~~~~~~~l~~~i~~l-~~~~~~~lvGhS~Gg 89 (247)
.+.-+.+.+.|.+.|.++++.|+=- .|.-..+. ....=......++..++..+ ...-++.+|-+|--.
T Consensus 28 ~~~~~~~v~~L~~~GIk~Va~D~DnTlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l~~~~I~v~VVTfSd~~ 103 (219)
T PTZ00445 28 HESADKFVDLLNECGIKVIASDFDLTMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRLKNSNIKISVVTFSDKE 103 (219)
T ss_pred HHHHHHHHHHHHHcCCeEEEecchhhhhhhhcccccCCCcchhhhhccCCHHHHHHHHHHHHCCCeEEEEEccchh
Confidence 3445678888999999999999832 11111111 00011111233344444444 123488888888643
No 468
>PRK13753 dihydropteroate synthase; Provisional
Probab=29.30 E-value=2.9e+02 Score=21.84 Aligned_cols=57 Identities=18% Similarity=0.077 Sum_probs=32.8
Q ss_pred HHHhCCc--EEEEecCCCCCCC--CCcccCccCHHHhHHHHHHHHHhCCCCCcEEEEEEehhHHHHHHH
Q 025845 31 RLVAGGH--RVTAVDLAASGIN--MKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGVTLALA 95 (247)
Q Consensus 31 ~l~~~g~--~vi~~D~~G~G~S--~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~lvGhS~Gg~ia~~~ 95 (247)
.+.+.|. .=|.+| ||.|.. .... .++ .+.+.+.++...+ ....|+|+|-=.++...+
T Consensus 159 ~~~~~Gi~~~~IilD-PGiGF~k~k~~~---~n~-~ll~~l~~l~~~~---g~PvLvg~SRKsfig~~~ 219 (279)
T PRK13753 159 ALRRSGVAADRLILD-PGMGFFLSPAPE---TSL-HVLSNLQKLKSAL---GLPLLVSVSRKSFLGATV 219 (279)
T ss_pred HHHHcCCChhhEEEe-CCCCCCCCCChH---HHH-HHHHhHHHHHHhC---CCceEEEccHhHHHHHHc
Confidence 3444565 458889 898873 2211 122 2344444443334 367899999988876433
No 469
>cd02742 GH20_hexosaminidase Beta-N-acetylhexosaminidases of glycosyl hydrolase family 20 (GH20) catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. These enzymes are broadly distributed in microorganisms, plants and animals, and play roles in various key physiological and pathological processes. These processes include cell structural integrity, energy storage, cellular signaling, fertilization, pathogen defense, viral penetration, the development of carcinomas, inflammatory events and lysosomal storage disorders. The GH20 enzymes include the eukaryotic beta-N-acetylhexosaminidases A and B, the bacterial chitobiases, dispersin B, and lacto-N-biosidase. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by the solvent or the enzyme, but by the substrate itself.
Probab=29.09 E-value=1.7e+02 Score=23.20 Aligned_cols=31 Identities=13% Similarity=0.045 Sum_probs=24.9
Q ss_pred CChhhHHHHHHHHHhCCcEEEE-ecCCCCCCC
Q 025845 20 HGAWCWYKLKARLVAGGHRVTA-VDLAASGIN 50 (247)
Q Consensus 20 ~~~~~~~~~~~~l~~~g~~vi~-~D~~G~G~S 50 (247)
-+......+++.-+++|.+||- +|.|||-.+
T Consensus 69 yT~~di~elv~yA~~rgI~viPEiD~PGH~~a 100 (303)
T cd02742 69 YTYAQLKDIIEYAAARGIEVIPEIDMPGHSTA 100 (303)
T ss_pred ECHHHHHHHHHHHHHcCCEEEEeccchHHHHH
Confidence 4556788888888889999886 999998544
No 470
>PF08197 TT_ORF2a: pORF2a truncated protein; InterPro: IPR013267 Most isolated ORF2 of TT virus (TTV) encode a 49 amino acid protein (pORF2a) because of an in-frame stop codon. ORF2s isolated from G1 TTV encode a 202 amino acid protein (pORF2ab) [].
Probab=29.04 E-value=45 Score=17.63 Aligned_cols=13 Identities=23% Similarity=0.276 Sum_probs=10.6
Q ss_pred EEEEecCCCCCCC
Q 025845 38 RVTAVDLAASGIN 50 (247)
Q Consensus 38 ~vi~~D~~G~G~S 50 (247)
.+-+-|+||+|+-
T Consensus 36 airardwpg~gq~ 48 (49)
T PF08197_consen 36 AIRARDWPGYGQG 48 (49)
T ss_pred ceEeccCCCcCCC
Confidence 5778899999864
No 471
>PF01580 FtsK_SpoIIIE: FtsK/SpoIIIE family; InterPro: IPR002543 The FtsK/SpoIIIE domain is found extensively in a wide variety of proteins from prokaryotes and plasmids [] some of which contain up to three copies.The domain contains a putative ATP binding P-loop motif. A mutation in FtsK causes a temperature sensitive block in cell division and it is involved in peptidoglycan synthesis or modification []. The SpoIIIE protein is implicated in intercellular chromosomal DNA transfer []. ; GO: 0000166 nucleotide binding, 0003677 DNA binding, 0005524 ATP binding, 0007049 cell cycle, 0007059 chromosome segregation, 0051301 cell division, 0016021 integral to membrane; PDB: 2IUS_E 2IUU_A 2IUT_A.
Probab=28.87 E-value=2.1e+02 Score=20.94 Aligned_cols=40 Identities=15% Similarity=0.207 Sum_probs=22.6
Q ss_pred EEEEEcCCCCChhhH-HHHHHHHHh----CCcEEEEecCCCCCCC
Q 025845 11 HFVLVHGVNHGAWCW-YKLKARLVA----GGHRVTAVDLAASGIN 50 (247)
Q Consensus 11 ~iv~lhG~~~~~~~~-~~~~~~l~~----~g~~vi~~D~~G~G~S 50 (247)
.+++....++....+ ..++..+.. .+.+++.+|..|.+.+
T Consensus 40 h~li~G~tgsGKS~~l~~ll~~l~~~~~p~~~~l~iiD~k~~~l~ 84 (205)
T PF01580_consen 40 HLLIAGATGSGKSTLLRTLLLSLALTYSPDDVQLYIIDPKGSDLA 84 (205)
T ss_dssp SEEEE--TTSSHHHHHHHHHHHHHTT--TTTEEEEEE-TTSSCCG
T ss_pred eEEEEcCCCCCccHHHHHHHHHHHHHhcCCccEEEEEcCCccccc
Confidence 344444444444443 456666665 5689999999876544
No 472
>TIGR00176 mobB molybdopterin-guanine dinucleotide biosynthesis protein MobB. This molybdenum cofactor biosynthesis enzyme is similar to the urease accessory protein UreG and to the hydrogenase accessory protein HypB, both GTP hydrolases involved in loading nickel into the metallocenters of their respective target enzymes.
Probab=28.80 E-value=1.4e+02 Score=20.97 Aligned_cols=37 Identities=19% Similarity=0.213 Sum_probs=26.5
Q ss_pred EEEcCCCCChhh--HHHHHHHHHhCCcEEEEecCCCCCC
Q 025845 13 VLVHGVNHGAWC--WYKLKARLVAGGHRVTAVDLAASGI 49 (247)
Q Consensus 13 v~lhG~~~~~~~--~~~~~~~l~~~g~~vi~~D~~G~G~ 49 (247)
+.+-|..++... -..++..|..+|++|.++..-+|+.
T Consensus 2 i~i~G~~gsGKTtl~~~l~~~l~~~G~~V~viK~~~~~~ 40 (155)
T TIGR00176 2 LQIVGPKNSGKTTLIERLVKALKARGYRVATIKHDHHDF 40 (155)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHhcCCeEEEEecccccc
Confidence 445576665554 3788888888899999998766653
No 473
>TIGR02113 coaC_strep phosphopantothenoylcysteine decarboxylase, streptococcal. In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the N-terminal region of TIGR00521, corresponding to phosphopantothenoylcysteine decarboxylase activity.
Probab=28.67 E-value=1.8e+02 Score=21.01 Aligned_cols=37 Identities=11% Similarity=-0.117 Sum_probs=25.4
Q ss_pred CCcEEEEEcCCCC---ChhhHHHHHHHHHhCCcEEEEecC
Q 025845 8 EEKHFVLVHGVNH---GAWCWYKLKARLVAGGHRVTAVDL 44 (247)
Q Consensus 8 ~~~~iv~lhG~~~---~~~~~~~~~~~l~~~g~~vi~~D~ 44 (247)
.+.|+++++.+.. .........+.|.+.|+.|+-++.
T Consensus 111 ~~~pv~i~PaMn~~M~~~p~~~~nl~~L~~~G~~vi~P~~ 150 (177)
T TIGR02113 111 PETPKLIAPAMNTKMYQNPITQRNIKILKKIGYQEIQPKE 150 (177)
T ss_pred CCCCEEEEeCCCHHHhCCHHHHHHHHHHHHCCCEEECCCc
Confidence 3568888885432 233457777889888888887764
No 474
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=28.65 E-value=2.2e+02 Score=22.02 Aligned_cols=41 Identities=12% Similarity=0.052 Sum_probs=27.3
Q ss_pred CCcEEEEEcCCCCChh----hHHHHHHHHHhCCcEEEEecCCCCC
Q 025845 8 EEKHFVLVHGVNHGAW----CWYKLKARLVAGGHRVTAVDLAASG 48 (247)
Q Consensus 8 ~~~~iv~lhG~~~~~~----~~~~~~~~l~~~g~~vi~~D~~G~G 48 (247)
..||+++.||--...- .-..+.+.|.+.|..+...-++|.|
T Consensus 210 ~~~plli~~G~~D~~v~~~~~~~~~~~~l~~~g~~v~~~~~~g~~ 254 (275)
T TIGR02821 210 RHSTILIDQGTADQFLDEQLRPDAFEQACRAAGQALTLRRQAGYD 254 (275)
T ss_pred cCCCeeEeecCCCcccCccccHHHHHHHHHHcCCCeEEEEeCCCC
Confidence 4678888899654321 1245667777778777777777754
No 475
>TIGR00246 tRNA_RlmH_YbeA rRNA large subunit m3Psi methyltransferase RlmH. This protein, in the SPOUT methyltransferase family, previously designated YbeA in E. coli, was shown to be responsible for a further modification, a methylation, to a pseudouridine base in ribosomal large subunit RNA.
Probab=28.64 E-value=1.4e+02 Score=20.98 Aligned_cols=42 Identities=17% Similarity=0.245 Sum_probs=23.3
Q ss_pred cEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCCcEEEEEEehhH
Q 025845 37 HRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGG 89 (247)
Q Consensus 37 ~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~lvGhS~Gg 89 (247)
-.||+.|-+|- ..+-.++|+.+.+..+. +.+-+.+||-+.|=
T Consensus 66 ~~~i~LDe~Gk---------~~sS~~fA~~l~~~~~~--g~~i~FvIGGa~G~ 107 (153)
T TIGR00246 66 AHVVTLDIPGK---------PWTTPQLADTLEKWKTD--GRDVTLLIGGPEGL 107 (153)
T ss_pred CeEEEEcCCCC---------cCCHHHHHHHHHHHhcc--CCeEEEEEcCCCcC
Confidence 35777776654 24556666666665332 22345566666554
No 476
>PRK12724 flagellar biosynthesis regulator FlhF; Provisional
Probab=28.57 E-value=3.7e+02 Score=22.84 Aligned_cols=73 Identities=12% Similarity=0.094 Sum_probs=42.9
Q ss_pred HHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCC--CCCcEEEEEEehhHH-HHHHHHHhCC-Ccc
Q 025845 28 LKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLP--AEEKVILVGHSLGGV-TLALAADKFP-HKI 103 (247)
Q Consensus 28 ~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~--~~~~~~lvGhS~Gg~-ia~~~a~~~p-~~v 103 (247)
+...+.+.++.+|.+|-+|+.. .-...++.+.++++... .....+||=-+..|. -...++..+. -.+
T Consensus 291 l~~~l~~~~~D~VLIDTaGr~~---------rd~~~l~eL~~~~~~~~~~~~~e~~LVLsAt~~~~~~~~~~~~f~~~~~ 361 (432)
T PRK12724 291 FKETLARDGSELILIDTAGYSH---------RNLEQLERMQSFYSCFGEKDSVENLLVLSSTSSYHHTLTVLKAYESLNY 361 (432)
T ss_pred HHHHHHhCCCCEEEEeCCCCCc---------cCHHHHHHHHHHHHhhcCCCCCeEEEEEeCCCCHHHHHHHHHHhcCCCC
Confidence 3344444679999999887632 22356666677666541 122456665555554 5555555553 247
Q ss_pred ceEEEE
Q 025845 104 SVAVFV 109 (247)
Q Consensus 104 ~~lvl~ 109 (247)
.++|+.
T Consensus 362 ~glIlT 367 (432)
T PRK12724 362 RRILLT 367 (432)
T ss_pred CEEEEE
Confidence 888874
No 477
>PRK11913 phhA phenylalanine 4-monooxygenase; Reviewed
Probab=28.48 E-value=39 Score=26.39 Aligned_cols=16 Identities=19% Similarity=0.314 Sum_probs=12.3
Q ss_pred CCccccccChhhHHHHH
Q 025845 227 SRRAFFLYHNTLFIQFV 243 (247)
Q Consensus 227 ~gH~~~~e~p~~~~~~v 243 (247)
-||+|++.+| .|++.+
T Consensus 132 fGHvPmL~~p-~FAdf~ 147 (275)
T PRK11913 132 FGHVPLLTNP-VFADFM 147 (275)
T ss_pred hccchhhcCH-HHHHHH
Confidence 5999999999 455544
No 478
>TIGR03018 pepcterm_TyrKin exopolysaccharide/PEPCTERM locus tyrosine autokinase. Members of this protein family are related to a known protein-tyrosine autokinase and to numerous homologs from exopolysaccharide biosynthesis region proteins, many of which are designated as chain length determinants. Most members of this family contain a short region, immediately C-terminal to the region modeled here, with an abundance of Tyr residues. These C-terminal tyrosine residues are likely to be autophosphorylation sites. Some members of this family are fusion proteins.
Probab=28.39 E-value=2.1e+02 Score=21.07 Aligned_cols=39 Identities=10% Similarity=0.057 Sum_probs=27.3
Q ss_pred CCCcEEEEEcCCCCChhh--HHHHHHHHHh-CCcEEEEecCC
Q 025845 7 MEEKHFVLVHGVNHGAWC--WYKLKARLVA-GGHRVTAVDLA 45 (247)
Q Consensus 7 ~~~~~iv~lhG~~~~~~~--~~~~~~~l~~-~g~~vi~~D~~ 45 (247)
.....|.+.-+-+|.... -..++..|+. .|++|+.+|.=
T Consensus 33 ~~~~vi~v~s~kgG~GkSt~a~nLA~~la~~~g~~VLlvD~D 74 (207)
T TIGR03018 33 KNNNLIMVTSSLPGEGKSFTAINLAISLAQEYDKTVLLIDAD 74 (207)
T ss_pred CCCeEEEEECCCCCCCHHHHHHHHHHHHHHhcCCeEEEEECC
Confidence 345677777766665544 3577788875 59999998874
No 479
>PRK12569 hypothetical protein; Provisional
Probab=28.38 E-value=2.6e+02 Score=21.56 Aligned_cols=55 Identities=15% Similarity=-0.001 Sum_probs=35.6
Q ss_pred cCCCCChhhHHHHHHHHHhCCcEEEE----ecCCCCCCCCCcccCccCHHHhHHHHHHHHHhC
Q 025845 16 HGVNHGAWCWYKLKARLVAGGHRVTA----VDLAASGINMKRIEDVHTFHAYSEPLMEVLASL 74 (247)
Q Consensus 16 hG~~~~~~~~~~~~~~l~~~g~~vi~----~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l 74 (247)
-|-.|+....+..++.-.++|..|=+ +|+.|||+..-. .+.+++.+.+...|..|
T Consensus 40 G~HAGDp~~M~~tv~lA~~~~V~IGAHPsyPD~~gFGRr~m~----~s~~el~~~v~yQigaL 98 (245)
T PRK12569 40 GFHAGDPNIMRRTVELAKAHGVGIGAHPGFRDLVGFGRRHIN----ASPQELVNDVLYQLGAL 98 (245)
T ss_pred cccCCCHHHHHHHHHHHHHcCCEeccCCCCCcCCCCCCCCCC----CCHHHHHHHHHHHHHHH
Confidence 34467888888888766656655444 899999988754 35555555555444443
No 480
>PRK07877 hypothetical protein; Provisional
Probab=28.22 E-value=1e+02 Score=28.09 Aligned_cols=38 Identities=16% Similarity=0.052 Sum_probs=28.9
Q ss_pred HHhCCCCCcEEEEEEehhHHHHHHHHHhCCCccceEEEEec
Q 025845 71 LASLPAEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTA 111 (247)
Q Consensus 71 i~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~ 111 (247)
-+.| ...++.++|-+.|+.++..+|..- -|..+++++.
T Consensus 102 Q~~L-~~~~V~IvG~GlGs~~a~~LaraG--vvG~l~lvD~ 139 (722)
T PRK07877 102 QERL-GRLRIGVVGLSVGHAIAHTLAAEG--LCGELRLADF 139 (722)
T ss_pred HHHH-hcCCEEEEEecHHHHHHHHHHHcc--CCCeEEEEcC
Confidence 3455 667999999999999998888642 1377888875
No 481
>TIGR03127 RuMP_HxlB 6-phospho 3-hexuloisomerase. Members of this protein family are 6-phospho 3-hexuloisomerase (PHI), or the PHI domain of a fusion protein. This enzyme is part of the ribulose monophosphate (RuMP) pathway, which in one direction removes the toxic metabolite formaldehyde by assimilation into fructose-6-phosphate. In the other direction, in species lacking a complete pentose phosphate pathway, the RuMP pathway yields ribulose-5-phosphate, necessary for nucleotide biosynthesis, at the cost of also yielding formaldehyde. These latter species tend usually have a formaldehyde-activating enzyme to attach formaldehyde to the C1 carrier tetrahydromethanopterin.
Probab=28.22 E-value=99 Score=22.11 Aligned_cols=24 Identities=13% Similarity=0.253 Sum_probs=19.1
Q ss_pred CCCcEEEEEEehhHHHHHHHHHhC
Q 025845 76 AEEKVILVGHSLGGVTLALAADKF 99 (247)
Q Consensus 76 ~~~~~~lvGhS~Gg~ia~~~a~~~ 99 (247)
..++++++|....+.+|..++.+.
T Consensus 29 ~a~~I~i~G~G~S~~~A~~~~~~l 52 (179)
T TIGR03127 29 KAKRIFVAGAGRSGLVGKAFAMRL 52 (179)
T ss_pred hCCEEEEEecCHHHHHHHHHHHHH
Confidence 446999999988888888887654
No 482
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=28.20 E-value=60 Score=25.98 Aligned_cols=27 Identities=7% Similarity=-0.082 Sum_probs=21.3
Q ss_pred cceeeecCCCccccccChhhHHHHHHhh
Q 025845 219 HMSELINCSRRAFFLYHNTLFIQFVYVL 246 (247)
Q Consensus 219 ~~~~~i~~~gH~~~~e~p~~~~~~v~~~ 246 (247)
..++.|.+|||... .+|+.-.+.+..+
T Consensus 287 ltf~~V~~AGHmV~-~qP~~al~m~~~f 313 (319)
T PLN02213 287 MTFATIKAGGHTAE-YRPNETFIMFQRW 313 (319)
T ss_pred ceEEEEcCCCCCCC-cCHHHHHHHHHHH
Confidence 56778889999985 6999888776654
No 483
>COG4667 Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=28.03 E-value=74 Score=24.82 Aligned_cols=42 Identities=21% Similarity=0.151 Sum_probs=28.1
Q ss_pred HHHHHHHHHhCCCCCcEE-EEEEehhHHHHHHHHHhCCCccceEE
Q 025845 64 SEPLMEVLASLPAEEKVI-LVGHSLGGVTLALAADKFPHKISVAV 107 (247)
Q Consensus 64 ~~~l~~~i~~l~~~~~~~-lvGhS~Gg~ia~~~a~~~p~~v~~lv 107 (247)
|-.+.++++.- ..++. ++|.|+|+.-+..|..+-+.+-++++
T Consensus 27 AGVLD~fl~a~--~~~f~~~~GvSAGA~n~~aYls~Q~gra~~~~ 69 (292)
T COG4667 27 AGVLDEFLRAN--FNPFDLVVGVSAGALNLVAYLSKQRGRARRVI 69 (292)
T ss_pred HHHHHHHHHhc--cCCcCeeeeecHhHHhHHHHhhcCCchHHHHH
Confidence 44555666433 23444 67999999988888887777655554
No 484
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=28.02 E-value=58 Score=21.87 Aligned_cols=34 Identities=18% Similarity=0.264 Sum_probs=23.4
Q ss_pred EEEEcCCCCChhhHHHHHHHHHhCCcEEEEecCC
Q 025845 12 FVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLA 45 (247)
Q Consensus 12 iv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D~~ 45 (247)
++...|..|+-.=+-.++..|.++|++|...-.+
T Consensus 2 li~~~Gt~Ghv~P~lala~~L~~rGh~V~~~~~~ 35 (139)
T PF03033_consen 2 LIATGGTRGHVYPFLALARALRRRGHEVRLATPP 35 (139)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHTT-EEEEEETG
T ss_pred EEEEcCChhHHHHHHHHHHHHhccCCeEEEeecc
Confidence 4555566666666778889999999999765444
No 485
>PLN02840 tRNA dimethylallyltransferase
Probab=27.83 E-value=3.8e+02 Score=22.71 Aligned_cols=29 Identities=14% Similarity=0.151 Sum_probs=21.4
Q ss_pred CccCHHHhHHHHHHHHHhC-CCCCcEEEEE
Q 025845 56 DVHTFHAYSEPLMEVLASL-PAEEKVILVG 84 (247)
Q Consensus 56 ~~~~~~~~~~~l~~~i~~l-~~~~~~~lvG 84 (247)
+.|+..+|.++..+.++.+ ...+..+|||
T Consensus 88 e~ySv~~F~~~A~~~I~~i~~rgkiPIvVG 117 (421)
T PLN02840 88 DDYSVGAFFDDARRATQDILNRGRVPIVAG 117 (421)
T ss_pred CceeHHHHHHHHHHHHHHHHhcCCCEEEEc
Confidence 4578999999999888876 2345567776
No 486
>PHA00350 putative assembly protein
Probab=27.82 E-value=1.3e+02 Score=25.08 Aligned_cols=35 Identities=14% Similarity=0.204 Sum_probs=24.7
Q ss_pred EEEEEcCCCCChhh----HHHHHHHHHhCCcEEEEecCCCC
Q 025845 11 HFVLVHGVNHGAWC----WYKLKARLVAGGHRVTAVDLAAS 47 (247)
Q Consensus 11 ~iv~lhG~~~~~~~----~~~~~~~l~~~g~~vi~~D~~G~ 47 (247)
.|.+++|..|+... |..+.+.+. +|..|++ +++|.
T Consensus 2 mI~l~tG~pGSGKT~~aV~~~i~palk-~GR~V~T-NI~Gl 40 (399)
T PHA00350 2 MIYAIVGRPGSYKSYEAVVYHIIPALK-DGRKVIT-NIPGL 40 (399)
T ss_pred ceEEEecCCCCchhHHHHHHHHHHHHH-CCCEEEE-CCCCC
Confidence 47889999888765 445667777 6865554 88873
No 487
>PF13478 XdhC_C: XdhC Rossmann domain; PDB: 3ON5_A 2WE8_B 2WE7_A.
Probab=27.81 E-value=1.8e+02 Score=19.99 Aligned_cols=31 Identities=32% Similarity=0.355 Sum_probs=17.8
Q ss_pred EEcCCCCChhhHHHHHHHHHhCCcEEEEecCCCC
Q 025845 14 LVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAAS 47 (247)
Q Consensus 14 ~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~ 47 (247)
++-|.+..... +++.....||+|..+|.|.-
T Consensus 2 ~I~GaG~va~a---l~~la~~lg~~v~v~d~r~e 32 (136)
T PF13478_consen 2 VIFGAGHVARA---LARLAALLGFRVTVVDPRPE 32 (136)
T ss_dssp EEES-STCHHH---HHHHHHHCTEEEEEEES-CC
T ss_pred EEEeCcHHHHH---HHHHHHhCCCEEEEEcCCcc
Confidence 34454544444 44444446899999999843
No 488
>PRK14494 putative molybdopterin-guanine dinucleotide biosynthesis protein MobB/FeS domain-containing protein protein; Provisional
Probab=27.77 E-value=1.9e+02 Score=21.96 Aligned_cols=40 Identities=18% Similarity=0.152 Sum_probs=30.2
Q ss_pred EEEEEcCCCCChhh--HHHHHHHHHhCCcEEEEecCCCCCCC
Q 025845 11 HFVLVHGVNHGAWC--WYKLKARLVAGGHRVTAVDLAASGIN 50 (247)
Q Consensus 11 ~iv~lhG~~~~~~~--~~~~~~~l~~~g~~vi~~D~~G~G~S 50 (247)
.++.+=|..++..+ -..++..|.++|++|..+...+|+..
T Consensus 2 ~vi~ivG~~gsGKTtl~~~l~~~L~~~G~~V~viK~~~~~~d 43 (229)
T PRK14494 2 RAIGVIGFKDSGKTTLIEKILKNLKERGYRVATAKHTHHEFD 43 (229)
T ss_pred eEEEEECCCCChHHHHHHHHHHHHHhCCCeEEEEEecccCCC
Confidence 46777777665554 47888999888999999998777544
No 489
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=27.67 E-value=1.4e+02 Score=23.83 Aligned_cols=34 Identities=21% Similarity=0.375 Sum_probs=23.4
Q ss_pred CCcEEEEEcCCCCCh-----hhHHHHHHHHHhCCcEEEE
Q 025845 8 EEKHFVLVHGVNHGA-----WCWYKLKARLVAGGHRVTA 41 (247)
Q Consensus 8 ~~~~iv~lhG~~~~~-----~~~~~~~~~l~~~g~~vi~ 41 (247)
.++.|+++||..... +.|..+++.|.++|++|+.
T Consensus 177 ~~~~i~~~~~~s~~~k~Wp~e~~a~li~~l~~~~~~ivl 215 (322)
T PRK10964 177 AGPYLVFLHATTRDDKHWPEAHWRELIGLLAPSGLRIKL 215 (322)
T ss_pred CCCeEEEEeCCCcccccCCHHHHHHHHHHHHHCCCeEEE
Confidence 345677788875432 2467888888777888775
No 490
>TIGR00682 lpxK tetraacyldisaccharide 4'-kinase. Also called lipid-A 4'-kinase. This essential gene encodes an enzyme in the pathway of lipid A biosynthesis in Gram-negative organisms. A single copy of this protein is found in Gram-negative bacteria. PSI-BLAST converges on this set of apparent orthologs without identifying any other homologs.
Probab=27.59 E-value=1.9e+02 Score=23.25 Aligned_cols=42 Identities=21% Similarity=0.142 Sum_probs=28.9
Q ss_pred cEEEEEcCC--CCChhh--HHHHHHHHHhCCcEEEEecCCCCCCCCC
Q 025845 10 KHFVLVHGV--NHGAWC--WYKLKARLVAGGHRVTAVDLAASGINMK 52 (247)
Q Consensus 10 ~~iv~lhG~--~~~~~~--~~~~~~~l~~~g~~vi~~D~~G~G~S~~ 52 (247)
-|||.+-.+ ||+..+ -..+++.|.++|+++..+. ||+|.+..
T Consensus 28 vPVIsVGNitvGGTGKTP~v~~La~~l~~~G~~~~IlS-RGYg~~~~ 73 (311)
T TIGR00682 28 VPVVIVGNLSVGGTGKTPVVVWLAELLKDRGLRVGVLS-RGYGSKTK 73 (311)
T ss_pred CCEEEEeccccCCcChHHHHHHHHHHHHHCCCEEEEEC-CCCCCCCC
Confidence 366666654 344433 4667788888999988887 79998653
No 491
>COG2376 DAK1 Dihydroxyacetone kinase [Carbohydrate transport and metabolism]
Probab=27.51 E-value=1.8e+02 Score=23.45 Aligned_cols=42 Identities=24% Similarity=0.392 Sum_probs=30.8
Q ss_pred CcEEEEEcCCCCChhh-----HHHHHHHHHhCCcEEE---------EecCCCCCCC
Q 025845 9 EKHFVLVHGVNHGAWC-----WYKLKARLVAGGHRVT---------AVDLAASGIN 50 (247)
Q Consensus 9 ~~~iv~lhG~~~~~~~-----~~~~~~~l~~~g~~vi---------~~D~~G~G~S 50 (247)
...+|++.|+|+++.. ++.+.+.|.++|..+. ..|+.|+..+
T Consensus 248 ~~v~~lvn~lG~tp~~el~~~~~~v~~~l~~~~i~i~~~~~G~~~Tsl~m~G~sit 303 (323)
T COG2376 248 DEVAVLVNGLGATPLMELYILYNRVARLLAAKGITIERTLVGNYMTSLDMAGFSIT 303 (323)
T ss_pred CcEEEEecCCCCCcHHHHHHHHHHHHHHHHHCCCEEEEeeecceecccccCCceEE
Confidence 5689999999998754 6788889988875543 4566666544
No 492
>PRK03846 adenylylsulfate kinase; Provisional
Probab=27.40 E-value=1.7e+02 Score=21.33 Aligned_cols=37 Identities=14% Similarity=0.033 Sum_probs=24.6
Q ss_pred CCCcEEEEEcCCCCChhh--HHHHHHHHHhCCcEEEEec
Q 025845 7 MEEKHFVLVHGVNHGAWC--WYKLKARLVAGGHRVTAVD 43 (247)
Q Consensus 7 ~~~~~iv~lhG~~~~~~~--~~~~~~~l~~~g~~vi~~D 43 (247)
+..|.++.+.|..|+... -..+...|...|+.++.+|
T Consensus 21 ~~~~~~i~i~G~~GsGKSTla~~l~~~l~~~~~~~~~ld 59 (198)
T PRK03846 21 GHKGVVLWFTGLSGSGKSTVAGALEEALHELGVSTYLLD 59 (198)
T ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHHHhCCCCEEEEc
Confidence 356778888887665543 4555566665677788876
No 493
>PF10412 TrwB_AAD_bind: Type IV secretion-system coupling protein DNA-binding domain; InterPro: IPR019476 The plasmid conjugative coupling protein TraD (also known as TrwB) is a basic integral inner-membrane nucleoside-triphosphate-binding protein. It is the structural prototype for the type IV secretion system coupling proteins, a family of proteins essential for macromolecular transport between cells []. This protein forms hexamers from six structurally very similar protomers []. This hexamer contains a central channel running from the cytosolic pole (formed by the all-alpha domains) to the membrane pole ending at the transmembrane pore shaped by 12 transmembrane helices, rendering an overall mushroom-like structure. The TrwB all-alpha domain appears to be the DNA-binding domain of the structure. ; PDB: 1E9S_D 1E9R_F 1GKI_B 1GL7_G 1GL6_A.
Probab=27.32 E-value=94 Score=25.72 Aligned_cols=34 Identities=21% Similarity=0.255 Sum_probs=22.0
Q ss_pred EEEcCCCCChh--hHHHHHHHHHhCCcEEEEecCCC
Q 025845 13 VLVHGVNHGAW--CWYKLKARLVAGGHRVTAVDLAA 46 (247)
Q Consensus 13 v~lhG~~~~~~--~~~~~~~~l~~~g~~vi~~D~~G 46 (247)
+++.|..|+.. ....++..+.++|.++|.+|.-|
T Consensus 18 ~li~G~~GsGKT~~i~~ll~~~~~~g~~~iI~D~kg 53 (386)
T PF10412_consen 18 ILIIGATGSGKTQAIRHLLDQIRARGDRAIIYDPKG 53 (386)
T ss_dssp EEEEE-TTSSHHHHHHHHHHHHHHTT-EEEEEEETT
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHcCCEEEEEECCc
Confidence 34555555433 35677777777899999999876
No 494
>PRK02399 hypothetical protein; Provisional
Probab=27.27 E-value=2.3e+02 Score=23.72 Aligned_cols=44 Identities=16% Similarity=0.163 Sum_probs=37.8
Q ss_pred CCCcEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEecCCCCCCC
Q 025845 7 MEEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGIN 50 (247)
Q Consensus 7 ~~~~~iv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S 50 (247)
....|+|-+-=||-+..+-....+.|.++||.|+.|.--|.|..
T Consensus 183 ~~~kp~Ig~TmfGvTtp~v~~~~~~Le~~GyEvlVFHATG~GGr 226 (406)
T PRK02399 183 SDDKPLIGLTMFGVTTPCVQAAREELEARGYEVLVFHATGTGGR 226 (406)
T ss_pred CCCCceEEEecCCCcHHHHHHHHHHHHhCCCeEEEEcCCCCchH
Confidence 34567777888888888999999999999999999999999865
No 495
>PRK10319 N-acetylmuramoyl-l-alanine amidase I; Provisional
Probab=27.22 E-value=1.3e+02 Score=23.77 Aligned_cols=18 Identities=28% Similarity=0.303 Sum_probs=13.9
Q ss_pred CcEEEEecCCCCCCCCCcc
Q 025845 36 GHRVTAVDLAASGINMKRI 54 (247)
Q Consensus 36 g~~vi~~D~~G~G~S~~~~ 54 (247)
+-.+|++| ||||..++-.
T Consensus 55 ~~~~IvID-pGHGG~DpGA 72 (287)
T PRK10319 55 GKRVVMLD-PGHGGIDTGA 72 (287)
T ss_pred CCeEEEEE-CCCCCCCCCC
Confidence 34799999 9999886533
No 496
>COG1926 Predicted phosphoribosyltransferases [General function prediction only]
Probab=27.10 E-value=2.4e+02 Score=21.20 Aligned_cols=48 Identities=23% Similarity=0.246 Sum_probs=32.8
Q ss_pred HHHhHHHHHHHHHhCCCCCcEEEEEEehhHH-HHHHHHHhCCCccceEE
Q 025845 60 FHAYSEPLMEVLASLPAEEKVILVGHSLGGV-TLALAADKFPHKISVAV 107 (247)
Q Consensus 60 ~~~~~~~l~~~i~~l~~~~~~~lvGhS~Gg~-ia~~~a~~~p~~v~~lv 107 (247)
-.+--+.|.+.|..+.+.+++++.|-+.||. ++.+.|....-...-+|
T Consensus 7 R~dAGr~La~~l~~~~~~~~~iVlaLpRGGvpva~evA~~lga~ldvli 55 (220)
T COG1926 7 RTDAGRKLAQELAALRDLKDVIVLALPRGGVPVAFEVAQALGAPLDVLI 55 (220)
T ss_pred HHHHHHHHHHHHHhhccCCCcEEEEecCCCchHHHHHHHHhCCCeeEEE
Confidence 3445566777777773368999999999996 67888876543333333
No 497
>PRK06696 uridine kinase; Validated
Probab=26.72 E-value=2.1e+02 Score=21.34 Aligned_cols=37 Identities=14% Similarity=0.155 Sum_probs=27.5
Q ss_pred CCCcEEEEEcCCCCChhh--HHHHHHHHHhCCcEEEEec
Q 025845 7 MEEKHFVLVHGVNHGAWC--WYKLKARLVAGGHRVTAVD 43 (247)
Q Consensus 7 ~~~~~iv~lhG~~~~~~~--~~~~~~~l~~~g~~vi~~D 43 (247)
..+|.||.+-|..++... -..+++.|.+.|..|+.+.
T Consensus 19 ~~~~~iI~I~G~sgsGKSTlA~~L~~~l~~~g~~v~~~~ 57 (223)
T PRK06696 19 LTRPLRVAIDGITASGKTTFADELAEEIKKRGRPVIRAS 57 (223)
T ss_pred CCCceEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEec
Confidence 457899999999877654 3677788876677777744
No 498
>COG4874 Uncharacterized protein conserved in bacteria containing a pentein-type domain [Function unknown]
Probab=26.71 E-value=1.3e+02 Score=23.05 Aligned_cols=27 Identities=19% Similarity=0.190 Sum_probs=23.1
Q ss_pred HHHHHHHHHhCCcEEEEecCCCCCCCC
Q 025845 25 WYKLKARLVAGGHRVTAVDLAASGINM 51 (247)
Q Consensus 25 ~~~~~~~l~~~g~~vi~~D~~G~G~S~ 51 (247)
|...++.|.+.|.+|..+|.-|-|.++
T Consensus 59 f~amve~L~~~GvdV~ifddtg~~~TP 85 (318)
T COG4874 59 FNAMVEGLRQAGVDVVIFDDTGQGETP 85 (318)
T ss_pred HHHHHHHHHhcCceEEEeecCCCCCCC
Confidence 566778888899999999999988775
No 499
>TIGR02260 benz_CoA_red_B benzoyl-CoA reductase, bcr type, subunit B. This model describes B, or beta, subunit of the bcr type of benzoyl-CoA reductase, a 4-subunit enzyme. Many aromatic compounds are metabolized by way of benzoyl-CoA.
Probab=26.70 E-value=3.9e+02 Score=22.50 Aligned_cols=39 Identities=21% Similarity=0.177 Sum_probs=27.1
Q ss_pred CcEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEecCCCCC
Q 025845 9 EKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASG 48 (247)
Q Consensus 9 ~~~iv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G 48 (247)
..+-|++||.+.... ...+.+.+.+.|..|++-|+..++
T Consensus 266 e~~Ril~~G~P~~~~-~~~~~k~~ee~Ga~VV~~~~~~~~ 304 (413)
T TIGR02260 266 EKYRLVVEGPPNWTN-FREFWKLFYDEGAVVVASSYTKVG 304 (413)
T ss_pred cceEEEEECCCcchh-HHHHHHHHHHCCCEEEEEeccccc
Confidence 468899999876543 233444455678999999887654
No 500
>PRK11168 glpC sn-glycerol-3-phosphate dehydrogenase subunit C; Provisional
Probab=26.69 E-value=3.2e+02 Score=22.56 Aligned_cols=87 Identities=16% Similarity=0.031 Sum_probs=0.0
Q ss_pred CCCcEEEEEcCCCC---ChhhHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCccCHHHhHHHHHHHHHhCCCCCcEEEE
Q 025845 7 MEEKHFVLVHGVNH---GAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILV 83 (247)
Q Consensus 7 ~~~~~iv~lhG~~~---~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~lv 83 (247)
..+..|+|++|-.. ....-......|.+.|+.|+.++...+|...............++...+.+... ......+|
T Consensus 159 ~~~~~v~~f~gC~~~~~~p~~~~a~~~lL~~~G~~v~~~~~~CCG~p~~~~G~~~~~~~~~~~n~~~l~~~-~~~g~~vv 237 (396)
T PRK11168 159 QYKKQVAYFHGCYVNYNHPQLGKDLVKVLNAMGYEVLLPKEKCCGLPLIANGFLDKARKQAEFNVESLREA-IEKGIPVI 237 (396)
T ss_pred CCCCeEEEECccccccCCcHHHHHHHHHHHHCCCEEEcCCCCccChhHHhCcCHHHHHHHHHHHHHHHHHH-HHcCCcEE
Q ss_pred EEehhHHHHHH
Q 025845 84 GHSLGGVTLAL 94 (247)
Q Consensus 84 GhS~Gg~ia~~ 94 (247)
...-+...++.
T Consensus 238 ~~c~~C~~~l~ 248 (396)
T PRK11168 238 ATSSSCTLTLR 248 (396)
T ss_pred EECccHHHHHH
Done!