Query 025848
Match_columns 247
No_of_seqs 61 out of 63
Neff 3.0
Searched_HMMs 13730
Date Mon Mar 25 18:57:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025848.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/025848hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1d5va_ a.4.5.14 (A:) Adipocyt 23.8 18 0.0013 25.8 2.0 18 184-201 20-37 (94)
2 d2cyua1 a.9.1.1 (A:2-40) E3-bi 13.3 38 0.0028 20.6 1.5 23 176-198 15-37 (39)
3 d2nqwa1 d.145.1.4 (A:4-90) Hyp 13.1 38 0.0028 22.6 1.6 26 176-201 2-29 (87)
4 d1w85i_ a.9.1.1 (I:) E3/E1 bin 11.4 50 0.0036 20.4 1.6 21 178-198 20-40 (42)
5 d2o3ga1 d.145.1.4 (A:180-255) 10.9 33 0.0024 22.6 0.6 17 185-201 5-21 (76)
6 d2rk5a1 d.145.1.4 (A:5-88) Put 10.6 42 0.0031 22.1 1.1 17 185-201 10-26 (84)
7 d2p13a1 d.145.1.4 (A:431-515) 10.4 43 0.0032 22.3 1.1 17 185-201 15-31 (85)
8 d2c6ya1 a.4.5.14 (A:1-98) Inte 9.6 57 0.0041 23.1 1.6 19 183-201 18-36 (98)
9 d1uqra_ c.23.13.1 (A:) Type II 9.2 53 0.0039 25.0 1.3 17 185-201 22-38 (146)
10 d1gqoa_ c.23.13.1 (A:) Type II 9.0 55 0.004 24.7 1.3 16 186-201 22-37 (141)
No 1
>d1d5va_ a.4.5.14 (A:) Adipocyte-transcription factor FREAC-11 (s12, fkh-14) {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.78 E-value=18 Score=25.81 Aligned_cols=18 Identities=33% Similarity=0.266 Sum_probs=15.0
Q ss_pred CccCCcchHhHHhhhcCC
Q 025848 184 GVHGDITLKDINQRIHSP 201 (247)
Q Consensus 184 g~~GdvTL~DIN~rIl~p 201 (247)
.-+|.+||+||.+.|...
T Consensus 20 sp~~~ltL~eIY~~i~~~ 37 (94)
T d1d5va_ 20 APEKKITLNGIYQFIMDR 37 (94)
T ss_dssp CSSSSBCHHHHHHHHHHH
T ss_pred CCCCCccHHHHHHHHHHH
Confidence 457889999999999755
No 2
>d2cyua1 a.9.1.1 (A:2-40) E3-binding domain of dihydrolipoamide succinyltransferase {Escherichia coli [TaxId: 562]}
Probab=13.26 E-value=38 Score=20.58 Aligned_cols=23 Identities=30% Similarity=0.489 Sum_probs=18.4
Q ss_pred eeeeeccCCccCCcchHhHHhhh
Q 025848 176 PFAFIKPCGVHGDITLKDINQRI 198 (247)
Q Consensus 176 PF~lvKP~g~~GdvTL~DIN~rI 198 (247)
-.+.|++.|.+|-||-.||=+-|
T Consensus 15 dl~~i~GtG~~GRI~k~Dv~~~i 37 (39)
T d2cyua1 15 DASAIKGTGVGGRLTREDVEKHL 37 (39)
T ss_dssp CGGGSCCCSSSSCCCHHHHHHHS
T ss_pred CHHHCcCCCCCCcEeHHHHHHHH
Confidence 34578999999999999995443
No 3
>d2nqwa1 d.145.1.4 (A:4-90) Hypothetical protein PG0272 {Porphyromonas gingivalis [TaxId: 837]}
Probab=13.13 E-value=38 Score=22.64 Aligned_cols=26 Identities=23% Similarity=0.484 Sum_probs=19.6
Q ss_pred eeeeeccC--CccCCcchHhHHhhhcCC
Q 025848 176 PFAFIKPC--GVHGDITLKDINQRIHSP 201 (247)
Q Consensus 176 PF~lvKP~--g~~GdvTL~DIN~rIl~p 201 (247)
||..+-.+ -++|.++|.|+|+.+-..
T Consensus 2 p~~ki~d~~~~v~G~~~l~dl~~~l~~~ 29 (87)
T d2nqwa1 2 PFKVLGDGSYLFEGKTSLSDVRHYLDLP 29 (87)
T ss_dssp CEEECTTSCEEEETTCBHHHHHHHHTCC
T ss_pred CeEEECCCEEEEEEeCCHHHHHHHhCCC
Confidence 55555555 368999999999998654
No 4
>d1w85i_ a.9.1.1 (I:) E3/E1 binding domain of dihydrolipoyl acetyltransferase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=11.36 E-value=50 Score=20.39 Aligned_cols=21 Identities=19% Similarity=0.438 Sum_probs=17.7
Q ss_pred eeeccCCccCCcchHhHHhhh
Q 025848 178 AFIKPCGVHGDITLKDINQRI 198 (247)
Q Consensus 178 ~lvKP~g~~GdvTL~DIN~rI 198 (247)
+-|++.|.+|-||-.||-.-|
T Consensus 20 ~~i~GTG~~GRItk~DV~~~i 40 (42)
T d1w85i_ 20 RLVQGTGKNGRVLKEDIDAFL 40 (42)
T ss_dssp TTSCCCSGGGCCCHHHHHHHH
T ss_pred HHCccCCCCCcEeHHHHHHHh
Confidence 468999999999999996544
No 5
>d2o3ga1 d.145.1.4 (A:180-255) Putative protein NMB1485 {Neisseria meningitidis [TaxId: 487]}
Probab=10.86 E-value=33 Score=22.58 Aligned_cols=17 Identities=18% Similarity=0.532 Sum_probs=15.0
Q ss_pred ccCCcchHhHHhhhcCC
Q 025848 185 VHGDITLKDINQRIHSP 201 (247)
Q Consensus 185 ~~GdvTL~DIN~rIl~p 201 (247)
++|.++|.|+|+.+-.+
T Consensus 5 vdG~~~i~dl~~~l~~~ 21 (76)
T d2o3ga1 5 VEGALEYVELAPQLNLP 21 (76)
T ss_dssp EETTCBHHHHTTTTTCC
T ss_pred EEcCCCHHHHHHHHCcC
Confidence 68999999999998765
No 6
>d2rk5a1 d.145.1.4 (A:5-88) Putative hemolysin SMU1693 {Streptococcus mutans [TaxId: 1309]}
Probab=10.61 E-value=42 Score=22.13 Aligned_cols=17 Identities=35% Similarity=0.579 Sum_probs=14.9
Q ss_pred ccCCcchHhHHhhhcCC
Q 025848 185 VHGDITLKDINQRIHSP 201 (247)
Q Consensus 185 ~~GdvTL~DIN~rIl~p 201 (247)
++|.++|.|+|+.+-..
T Consensus 10 v~G~~~l~dl~~~l~~~ 26 (84)
T d2rk5a1 10 VLGTMTLNDFNEYFETD 26 (84)
T ss_dssp EETTSBHHHHHHHHTCC
T ss_pred EEeeeEHHHHHHHhCCC
Confidence 57999999999999765
No 7
>d2p13a1 d.145.1.4 (A:431-515) Uncharacterized protein NE2227 {Nitrosomonas europaea [TaxId: 915]}
Probab=10.35 E-value=43 Score=22.30 Aligned_cols=17 Identities=12% Similarity=0.311 Sum_probs=14.8
Q ss_pred ccCCcchHhHHhhhcCC
Q 025848 185 VHGDITLKDINQRIHSP 201 (247)
Q Consensus 185 ~~GdvTL~DIN~rIl~p 201 (247)
++|.++|.|+|+.+-..
T Consensus 15 v~G~~~l~dl~~~l~~~ 31 (85)
T d2p13a1 15 MDGWISIRKASNLLEHD 31 (85)
T ss_dssp EETTSBHHHHHHHHTSC
T ss_pred EEecCCHHHHHHHHCCC
Confidence 68999999999998654
No 8
>d2c6ya1 a.4.5.14 (A:1-98) Interleukin enhancer binding factor {Human (Homo sapiens) [TaxId: 9606]}
Probab=9.63 E-value=57 Score=23.10 Aligned_cols=19 Identities=21% Similarity=0.253 Sum_probs=15.4
Q ss_pred CCccCCcchHhHHhhhcCC
Q 025848 183 CGVHGDITLKDINQRIHSP 201 (247)
Q Consensus 183 ~g~~GdvTL~DIN~rIl~p 201 (247)
...+|.+||+||.+.|...
T Consensus 18 ~sp~~~ltL~eIy~~i~~~ 36 (98)
T d2c6ya1 18 MAPDKQLTLNGIYTHITKN 36 (98)
T ss_dssp TSTTSCEEHHHHHHHHHHH
T ss_pred hCCCCCccHHHHHHHHHHh
Confidence 3467889999999999755
No 9
>d1uqra_ c.23.13.1 (A:) Type II 3-dehydroquinate dehydratase {Actinobacillus pleuropneumoniae [TaxId: 715]}
Probab=9.20 E-value=53 Score=24.97 Aligned_cols=17 Identities=35% Similarity=0.593 Sum_probs=13.9
Q ss_pred ccCCcchHhHHhhhcCC
Q 025848 185 VHGDITLKDINQRIHSP 201 (247)
Q Consensus 185 ~~GdvTL~DIN~rIl~p 201 (247)
.-|.+||.|||+.+..-
T Consensus 22 iYG~~TL~~i~~~~~~~ 38 (146)
T d1uqra_ 22 IYGSQTLSDIEQHLQQS 38 (146)
T ss_dssp GTTCCCHHHHHHHHHHH
T ss_pred cCCccCHHHHHHHHHHH
Confidence 56889999999998543
No 10
>d1gqoa_ c.23.13.1 (A:) Type II 3-dehydroquinate dehydratase {Bacillus subtilis [TaxId: 1423]}
Probab=9.04 E-value=55 Score=24.66 Aligned_cols=16 Identities=31% Similarity=0.403 Sum_probs=12.9
Q ss_pred cCCcchHhHHhhhcCC
Q 025848 186 HGDITLKDINQRIHSP 201 (247)
Q Consensus 186 ~GdvTL~DIN~rIl~p 201 (247)
-|..||.|||+++..-
T Consensus 22 YG~~TL~~i~~~~~~~ 37 (141)
T d1gqoa_ 22 FGRQTLTDIETDLFQF 37 (141)
T ss_dssp HCSCCHHHHHHHHHHH
T ss_pred CCccCHHHHHHHHHHH
Confidence 4789999999988643
Done!