Query 025851
Match_columns 247
No_of_seqs 228 out of 1856
Neff 6.2
Searched_HMMs 29240
Date Mon Mar 25 19:01:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025851.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025851hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1g2q_A Adenine phosphoribosylt 100.0 4.6E-34 1.6E-38 242.1 18.7 172 75-247 4-179 (187)
2 2dy0_A APRT, adenine phosphori 100.0 7.1E-34 2.4E-38 241.5 16.6 170 77-246 14-185 (190)
3 1qb7_A APRT, adenine phosphori 100.0 9.2E-34 3.2E-38 249.4 16.0 173 74-246 15-203 (236)
4 1zn8_A APRT, adenine phosphori 100.0 1.9E-33 6.5E-38 236.3 16.3 172 75-246 3-177 (180)
5 1l1q_A Adenine phosphoribosylt 100.0 1E-32 3.5E-37 233.8 16.8 171 76-246 3-176 (186)
6 1y0b_A Xanthine phosphoribosyl 99.9 4.6E-25 1.6E-29 187.6 16.2 167 76-246 6-179 (197)
7 1o57_A PUR operon repressor; p 99.9 2.1E-24 7.1E-29 195.4 17.0 163 75-246 85-250 (291)
8 1vch_A Phosphoribosyltransfera 99.9 4.6E-25 1.6E-29 184.0 11.4 157 81-246 8-170 (175)
9 3m3h_A OPRT, oprtase, orotate 99.9 7.2E-24 2.5E-28 186.6 14.4 149 85-247 39-197 (234)
10 3dez_A OPRT, oprtase, orotate 99.9 1.5E-23 5.1E-28 185.5 14.4 149 85-247 51-209 (243)
11 2yzk_A OPRT, oprtase, orotate 99.9 2.8E-23 9.5E-28 174.8 12.9 134 97-246 27-164 (178)
12 2p1z_A Phosphoribosyltransfera 99.9 2.8E-23 9.7E-28 175.1 12.1 156 77-247 10-173 (180)
13 2wns_A Orotate phosphoribosylt 99.9 1E-22 3.6E-27 175.0 13.9 135 97-246 31-169 (205)
14 3qw4_B UMP synthase; N-termina 99.9 1.1E-22 3.7E-27 194.2 15.2 156 76-246 261-423 (453)
15 1lh0_A OMP synthase; loop clos 99.9 1.4E-22 4.8E-27 175.3 12.8 133 97-246 33-182 (213)
16 2ps1_A Orotate phosphoribosylt 99.9 4.7E-22 1.6E-26 173.3 13.3 134 97-246 37-194 (226)
17 2aee_A OPRT, oprtase, orotate 99.9 8.2E-22 2.8E-26 169.8 14.1 136 97-246 37-176 (211)
18 3mjd_A Orotate phosphoribosylt 99.9 1E-21 3.4E-26 172.7 14.0 138 93-246 44-202 (232)
19 3n2l_A OPRT, oprtase, orotate 99.9 1.2E-21 4.1E-26 172.8 13.3 133 97-246 58-207 (238)
20 3hvu_A Hypoxanthine phosphorib 99.8 1.7E-20 5.8E-25 161.9 11.7 135 86-230 15-157 (204)
21 1fsg_A HGPRTASE, hypoxanthine- 99.8 1.3E-20 4.6E-25 165.1 7.9 143 88-230 32-183 (233)
22 3ozf_A Hypoxanthine-guanine-xa 99.8 8.3E-20 2.8E-24 162.1 7.9 140 91-230 49-197 (250)
23 1z7g_A HGPRT, HGPRTASE, hypoxa 99.8 3.2E-19 1.1E-23 154.7 9.7 134 87-230 17-167 (217)
24 1vdm_A Purine phosphoribosyltr 99.8 4.2E-18 1.4E-22 138.6 12.2 120 104-230 4-124 (153)
25 1hgx_A HGXPRTASE, hypoxanthine 99.8 3.6E-18 1.2E-22 143.7 11.3 123 98-230 7-136 (183)
26 2jbh_A Phosphoribosyltransfera 99.7 3.3E-18 1.1E-22 149.0 10.5 131 90-230 28-175 (225)
27 3o7m_A Hypoxanthine phosphorib 99.7 5.1E-17 1.7E-21 138.1 12.4 122 99-230 6-135 (186)
28 3lrt_A Ribose-phosphate pyroph 99.7 5.6E-17 1.9E-21 146.5 12.5 115 116-245 143-258 (286)
29 2geb_A Hypoxanthine-guanine ph 99.7 3.7E-17 1.3E-21 138.0 10.4 122 100-230 11-139 (185)
30 1pzm_A HGPRT, hypoxanthine-gua 99.7 4.2E-17 1.4E-21 140.8 10.9 124 98-230 20-159 (211)
31 1tc1_A Protein (hypoxanthine p 99.7 2.5E-16 8.7E-21 137.0 12.7 122 100-230 6-144 (220)
32 1a3c_A PYRR, pyrimidine operon 99.7 1E-16 3.6E-21 134.0 9.6 126 100-229 2-139 (181)
33 1yfz_A Hypoxanthine-guanine ph 99.7 8.7E-17 3E-21 137.7 9.2 121 100-230 31-159 (205)
34 1nul_A XPRT, xanthine-guanine 99.7 1.5E-16 5.2E-21 130.4 9.9 110 104-229 5-116 (152)
35 2ywu_A Hypoxanthine-guanine ph 99.6 1.4E-15 4.9E-20 128.5 12.3 117 104-230 12-136 (181)
36 1u9y_A RPPK;, ribose-phosphate 99.6 4.5E-16 1.6E-20 140.1 8.9 118 115-245 143-261 (284)
37 3s5j_B Ribose-phosphate pyroph 99.6 1.1E-15 3.8E-20 140.3 10.6 116 115-243 152-267 (326)
38 3ohp_A Hypoxanthine phosphorib 99.6 3.9E-15 1.3E-19 125.4 12.8 118 103-229 6-131 (177)
39 2ji4_A Phosphoribosyl pyrophos 99.6 1.1E-15 3.8E-20 142.8 10.0 127 115-241 180-324 (379)
40 1ufr_A TT1027, PYR mRNA-bindin 99.6 2E-15 6.8E-20 126.5 10.0 121 104-229 6-137 (181)
41 1wd5_A Hypothetical protein TT 99.6 3.9E-15 1.3E-19 127.6 11.1 110 126-238 23-167 (208)
42 2xbu_A Hypoxanthine-guanine ph 99.6 4.8E-15 1.7E-19 128.9 11.6 128 102-230 5-161 (221)
43 1w30_A PYRR bifunctional prote 99.6 6.8E-15 2.3E-19 126.0 10.5 123 102-229 13-153 (201)
44 3dah_A Ribose-phosphate pyroph 99.6 3.9E-15 1.3E-19 136.3 9.4 106 126-244 166-271 (319)
45 1dku_A Protein (phosphoribosyl 99.5 1.9E-14 6.6E-19 131.4 10.6 104 126-242 167-270 (317)
46 3acd_A Hypoxanthine-guanine ph 99.5 4.7E-13 1.6E-17 113.2 12.1 118 102-229 10-135 (181)
47 1ecf_A Glutamine phosphoribosy 99.5 1.9E-13 6.5E-18 131.7 10.2 117 108-226 276-396 (504)
48 1ao0_A Glutamine phosphoribosy 99.3 1.7E-12 6E-17 123.5 9.2 115 110-226 258-375 (459)
49 1dqn_A Guanine phosphoribosylt 99.3 2.1E-12 7E-17 113.2 5.6 113 101-229 31-153 (230)
50 1i5e_A Uracil phosphoribosyltr 99.0 1.2E-09 4.1E-14 94.1 10.8 100 127-239 71-172 (209)
51 1o5o_A Uracil phosphoribosyltr 98.9 1.6E-09 5.5E-14 94.3 7.9 99 128-239 84-184 (221)
52 2e55_A Uracil phosphoribosyltr 98.8 1.4E-08 4.6E-13 87.7 9.8 96 128-238 70-168 (208)
53 2ehj_A Uracil phosphoribosyltr 98.8 1.8E-08 6.1E-13 86.9 10.1 98 128-238 71-170 (208)
54 1v9s_A Uracil phosphoribosyltr 98.7 1.9E-08 6.5E-13 86.8 6.1 98 128-238 71-170 (208)
55 1bd3_D Uprtase, uracil phospho 98.7 4.4E-08 1.5E-12 86.4 7.8 96 129-238 105-205 (243)
56 3dmp_A Uracil phosphoribosyltr 98.4 2.9E-07 9.8E-12 79.9 7.1 97 128-238 79-178 (217)
57 1xtt_A Probable uracil phospho 98.3 2.5E-06 8.5E-11 73.9 8.3 102 128-238 73-180 (216)
58 3dah_A Ribose-phosphate pyroph 57.7 36 0.0012 30.4 8.1 73 135-221 14-90 (319)
59 1u9y_A RPPK;, ribose-phosphate 56.6 56 0.0019 28.4 9.1 71 137-221 9-82 (284)
60 3to5_A CHEY homolog; alpha(5)b 55.2 14 0.00047 28.5 4.3 32 187-221 10-41 (134)
61 3s5j_B Ribose-phosphate pyroph 54.5 50 0.0017 29.6 8.5 72 137-222 12-87 (326)
62 3lkv_A Uncharacterized conserv 48.4 48 0.0016 28.3 7.2 117 99-222 46-175 (302)
63 3f6p_A Transcriptional regulat 47.1 34 0.0012 24.2 5.2 29 189-220 2-30 (120)
64 3gl9_A Response regulator; bet 46.2 35 0.0012 24.2 5.2 28 190-220 3-30 (122)
65 3eod_A Protein HNR; response r 45.9 37 0.0013 24.1 5.3 31 187-220 5-35 (130)
66 1r6j_A Syntenin 1; PDZ, membra 43.8 22 0.00074 25.2 3.5 35 186-220 41-75 (82)
67 3h5i_A Response regulator/sens 42.0 40 0.0014 24.4 5.0 30 188-220 4-33 (140)
68 1dku_A Protein (phosphoribosyl 40.4 1.2E+02 0.004 26.8 8.6 74 135-222 16-93 (317)
69 2r44_A Uncharacterized protein 38.8 1.8E+02 0.0061 24.6 10.9 104 105-215 30-136 (331)
70 4hwg_A UDP-N-acetylglucosamine 38.7 45 0.0015 30.0 5.7 48 108-155 76-123 (385)
71 3lte_A Response regulator; str 38.2 52 0.0018 23.2 5.0 30 188-220 5-34 (132)
72 3ia7_A CALG4; glycosysltransfe 38.2 69 0.0024 27.5 6.7 41 115-156 91-131 (402)
73 3rsc_A CALG2; TDP, enediyne, s 36.8 67 0.0023 28.0 6.4 41 115-156 107-147 (415)
74 2ji4_A Phosphoribosyl pyrophos 35.9 1.2E+02 0.004 27.6 8.0 71 138-222 39-116 (379)
75 3hix_A ALR3790 protein; rhodan 35.4 37 0.0013 24.3 3.8 33 186-221 49-81 (106)
76 3gge_A PDZ domain-containing p 34.1 42 0.0014 24.7 3.9 43 185-227 46-88 (95)
77 3mm4_A Histidine kinase homolo 33.7 66 0.0022 25.5 5.4 28 187-217 59-86 (206)
78 3gt7_A Sensor protein; structu 33.1 65 0.0022 23.8 5.0 29 188-219 6-34 (154)
79 3m6m_D Sensory/regulatory prot 31.6 59 0.002 23.8 4.5 29 188-219 13-41 (143)
80 3t6k_A Response regulator rece 31.5 85 0.0029 22.5 5.3 29 189-220 4-32 (136)
81 3ilm_A ALR3790 protein; rhodan 31.5 48 0.0016 25.3 4.0 33 186-221 53-85 (141)
82 3hzh_A Chemotaxis response reg 31.2 76 0.0026 23.5 5.1 30 188-220 35-64 (157)
83 4dad_A Putative pilus assembly 31.1 56 0.0019 23.7 4.2 32 187-221 18-50 (146)
84 3grc_A Sensor protein, kinase; 30.9 87 0.003 22.3 5.3 29 188-219 5-33 (140)
85 3hdv_A Response regulator; PSI 30.7 76 0.0026 22.5 4.9 30 188-220 6-35 (136)
86 2jtq_A Phage shock protein E; 30.4 72 0.0024 21.6 4.5 32 187-221 39-70 (85)
87 1wi4_A Synip, syntaxin binding 29.9 41 0.0014 24.5 3.2 37 186-222 60-99 (109)
88 2iyf_A OLED, oleandomycin glyc 29.7 1E+02 0.0035 27.0 6.4 40 115-156 93-132 (430)
89 3foj_A Uncharacterized protein 29.5 91 0.0031 21.8 5.0 29 186-217 53-81 (100)
90 2iya_A OLEI, oleandomycin glyc 28.3 1.1E+02 0.0037 26.9 6.3 41 114-156 97-137 (424)
91 3i42_A Response regulator rece 28.3 71 0.0024 22.3 4.3 27 189-218 3-29 (127)
92 1i16_A Interleukin 16, LCF; cy 27.6 50 0.0017 24.8 3.5 38 185-222 75-112 (130)
93 3s2u_A UDP-N-acetylglucosamine 27.4 1.2E+02 0.0041 26.5 6.5 36 120-155 86-121 (365)
94 3h1g_A Chemotaxis protein CHEY 27.0 69 0.0024 22.7 4.1 27 189-218 5-31 (129)
95 2b4a_A BH3024; flavodoxin-like 26.7 1.2E+02 0.004 21.6 5.3 30 187-219 13-42 (138)
96 3eul_A Possible nitrate/nitrit 26.4 70 0.0024 23.3 4.1 27 187-216 13-39 (152)
97 3kto_A Response regulator rece 26.2 79 0.0027 22.6 4.3 30 188-220 5-34 (136)
98 2yjn_A ERYCIII, glycosyltransf 25.9 74 0.0025 28.3 4.8 32 122-155 140-171 (441)
99 3otg_A CALG1; calicheamicin, T 25.7 96 0.0033 26.8 5.4 38 116-155 120-157 (412)
100 2ayx_A Sensor kinase protein R 25.2 46 0.0016 27.5 3.1 33 186-221 8-40 (254)
101 4fzr_A SSFS6; structural genom 25.1 1E+02 0.0034 26.7 5.5 37 117-155 114-150 (398)
102 1tmy_A CHEY protein, TMY; chem 25.1 1.2E+02 0.0043 20.7 5.1 29 189-220 2-30 (120)
103 3snk_A Response regulator CHEY 24.8 87 0.003 22.3 4.3 30 188-220 13-43 (135)
104 3e17_A Tight junction protein 24.7 78 0.0027 21.8 3.8 34 186-219 40-73 (88)
105 3lrt_A Ribose-phosphate pyroph 24.6 1.3E+02 0.0046 26.1 6.1 69 138-222 10-82 (286)
106 3kyj_B CHEY6 protein, putative 24.5 73 0.0025 23.0 3.8 26 187-215 11-36 (145)
107 3rqi_A Response regulator prot 24.3 1.2E+02 0.004 23.3 5.2 30 188-220 6-35 (184)
108 2p6p_A Glycosyl transferase; X 24.1 1.1E+02 0.0038 26.2 5.5 37 117-155 98-134 (384)
109 3gk5_A Uncharacterized rhodane 23.8 88 0.003 22.4 4.1 29 186-217 52-80 (108)
110 2d92_A INAD-like protein; PDZ 23.6 1.1E+02 0.0037 21.8 4.6 36 186-221 63-98 (108)
111 3tum_A Shikimate dehydrogenase 23.5 97 0.0033 26.6 4.9 33 186-222 122-154 (269)
112 3hv2_A Response regulator/HD d 23.4 1.1E+02 0.0039 22.2 4.8 31 187-220 12-42 (153)
113 3o46_A Maguk P55 subfamily mem 23.4 82 0.0028 21.7 3.7 32 186-217 47-78 (93)
114 1gmx_A GLPE protein; transfera 23.3 54 0.0018 23.4 2.8 32 186-220 55-86 (108)
115 3jte_A Response regulator rece 23.0 1.3E+02 0.0043 21.5 4.9 27 190-219 4-30 (143)
116 3dzc_A UDP-N-acetylglucosamine 22.9 1.1E+02 0.0039 27.1 5.5 44 112-155 97-141 (396)
117 3lua_A Response regulator rece 22.9 1.5E+02 0.0052 21.0 5.4 30 188-220 3-33 (140)
118 3ot5_A UDP-N-acetylglucosamine 22.9 1.1E+02 0.0037 27.4 5.3 44 112-155 100-144 (403)
119 3a10_A Response regulator; pho 22.4 1.5E+02 0.0051 20.1 5.0 27 190-219 2-28 (116)
120 3iwh_A Rhodanese-like domain p 22.0 1.2E+02 0.0039 21.9 4.4 52 185-245 52-103 (103)
121 1srr_A SPO0F, sporulation resp 21.8 1.5E+02 0.0052 20.4 5.0 26 190-218 4-29 (124)
122 3f6c_A Positive transcription 21.5 1.3E+02 0.0044 21.1 4.6 27 191-220 3-29 (134)
123 1dcf_A ETR1 protein; beta-alph 21.4 1.5E+02 0.005 20.9 5.0 30 188-220 6-35 (136)
124 2j48_A Two-component sensor ki 21.4 1.5E+02 0.0052 19.7 4.9 28 189-219 1-28 (119)
125 2pln_A HP1043, response regula 20.9 1.5E+02 0.0052 20.9 5.0 31 187-220 16-46 (137)
126 3r68_A Na(+)/H(+) exchange reg 20.8 86 0.0029 21.5 3.4 36 186-221 47-82 (95)
127 3eme_A Rhodanese-like domain p 20.7 1.2E+02 0.0042 21.1 4.3 29 186-217 53-81 (103)
128 3n0r_A Response regulator; sig 20.6 1.4E+02 0.0049 25.2 5.4 30 188-220 159-188 (286)
No 1
>1g2q_A Adenine phosphoribosyltransferase 1; dimer, single domain, catalytic loop; 1.50A {Saccharomyces cerevisiae} SCOP: c.61.1.1 PDB: 1g2p_A
Probab=100.00 E-value=4.6e-34 Score=242.10 Aligned_cols=172 Identities=40% Similarity=0.749 Sum_probs=156.5
Q ss_pred ChHHHHHhcccccCCCCCCCCceEEechhhccCHHHHHHHHHHHHHHhcc----CCccEEEecCCcchhHHHHHHHHhCC
Q 025851 75 DPRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKD----KNISVVAGIEARGFIFGPPIALAIGA 150 (247)
Q Consensus 75 ~~~~~~l~~~ir~~p~fp~~gi~f~Di~~ll~dp~~~~~l~~~La~~~~~----~~iDvVVgve~rGf~lA~~LA~~Lg~ 150 (247)
++..+.|++.+|.+|+||+||+.|.|+..++.+++.++.+++.|++++.+ .++|+|++++.|||++|..+|+.+|+
T Consensus 4 ~~~~~~l~~~~~~~~~~p~~g~~~~d~~~~l~~~~~~~~~~~~La~~i~~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~~ 83 (187)
T 1g2q_A 4 ASYAQELKLALHQYPNFPSEGILFEDFLPIFRNPGLFQKLIDAFKLHLEEAFPEVKIDYIVGLESRGFLFGPTLALALGV 83 (187)
T ss_dssp HHHHHHHHHHCEEETTCSSTTCCEEECHHHHHSHHHHHHHHHHHHHHHHHHCTTSCCCEEEEETTTHHHHHHHHHHHHTC
T ss_pred hHHHHHHHHhcccCCCCCCCCEEEEehHhhhcCHHHHHHHHHHHHHHHhhhcccCCCCEEEEEccCcHHHHHHHHHHHCC
Confidence 35667899999999999999999999999999999999999999998875 56899999999999999999999999
Q ss_pred CeEEeeccCCCCCceeeeeeeeccccceeEEeecccCCCCEEEEEecchhhhHHHHHHHHHHHhCCCeEEEEEEEEeccC
Q 025851 151 KFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPE 230 (247)
Q Consensus 151 p~v~iRK~~kl~~~~~s~~y~~e~g~~~~~l~~~~~~~GkrVLIVDDIltTG~Tl~aa~~lLk~aGa~vV~v~vlv~~~~ 230 (247)
|+..+||.++.++...+.+|+.+++++.+++..+...+|++|||||||+|||+|+.+++++|+++|++++++++++++++
T Consensus 84 p~~~~rk~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~~l~~~~~ 163 (187)
T 1g2q_A 84 GFVPVRKAGKLPGECFKATYEKEYGSDLFEIQKNAIPAGSNVIIVDDIIATGGSAAAAGELVEQLEANLLEYNFVMELDF 163 (187)
T ss_dssp EEEEEEETTCSCSSEEEEEEECSSCEEEEEEETTSSCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEECCC
T ss_pred CEEEEEEeCCCCcceecHHHHHHhCCCcEEEecccCCCcCEEEEECCCcccHHHHHHHHHHHHHcCCeEEEEEEEEEccC
Confidence 99988888777777777777777777788887666679999999999999999999999999999999999999999998
Q ss_pred cccccccCCCCcccccC
Q 025851 231 LKGRERLGEKPLFVLVS 247 (247)
Q Consensus 231 ~~grekL~~~pv~sL~~ 247 (247)
.+|+++| ++|++||++
T Consensus 164 ~~g~~~l-~~~~~sl~~ 179 (187)
T 1g2q_A 164 LKGRSKL-NAPVFTLLN 179 (187)
T ss_dssp SSCCCCC-SSCEEECC-
T ss_pred cCchhhc-CccEEEEEE
Confidence 8999999 899999974
No 2
>2dy0_A APRT, adenine phosphoribosyltransferase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.25A {Escherichia coli K12}
Probab=100.00 E-value=7.1e-34 Score=241.50 Aligned_cols=170 Identities=51% Similarity=0.916 Sum_probs=155.7
Q ss_pred HHHHHhcccccCCCCCCCCceEEechhhccCHHHHHHHHHHHHHHhccCCccEEEecCCcchhHHHHHHHHhCCCeEEee
Q 025851 77 RIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMR 156 (247)
Q Consensus 77 ~~~~l~~~ir~~p~fp~~gi~f~Di~~ll~dp~~~~~l~~~La~~~~~~~iDvVVgve~rGf~lA~~LA~~Lg~p~v~iR 156 (247)
.++.|++.+|.+|+||++|+.|.|+.+++.+++.++.+++.|++.+.+.++|+|++++.|||++|..+|+.+++|++++|
T Consensus 14 ~~~~l~~~i~~~p~~~~~g~~~~d~~~~~~~~~~~~~l~~~la~~~~~~~~d~Iv~v~~rG~~~a~~la~~l~~p~~~~r 93 (190)
T 2dy0_A 14 QLEYLKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIDLLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVR 93 (190)
T ss_dssp HHHHHHHHSEEETTCSSTTCCEEETHHHHHCHHHHHHHHHHHHHHHTTTTCCEEEEETTHHHHHHHHHHHHHTCEEEEEB
T ss_pred HHHHHHHHHhhCCCCCCCCeEEEeChhhhcCHHHHHHHHHHHHHHhccCCCCEEEEECcccHHHHHHHHHHHCCCEEEEE
Confidence 35679999999999999999999999999999999999999999997767899999999999999999999999999999
Q ss_pred ccCCCCCceeeeeeeeccccceeEEeecccCCCCEEEEEecchhhhHHHHHHHHHHHhCCCeEEEEEEEEeccCcccccc
Q 025851 157 KPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRER 236 (247)
Q Consensus 157 K~~kl~~~~~s~~y~~e~g~~~~~l~~~~~~~GkrVLIVDDIltTG~Tl~aa~~lLk~aGa~vV~v~vlv~~~~~~grek 236 (247)
|+++.++...+..|+.+|+.+.+++..+...+|++|||||||+|||+|+.+++++|+++|++++++++++++.+++|+++
T Consensus 94 k~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~gk~VLlVDDvitTG~Tl~~a~~~L~~~Ga~~V~~~~l~~~~~~~~~~~ 173 (190)
T 2dy0_A 94 KPGKLPRETISETYDLEYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVADAAFIINLFDLGGEQR 173 (190)
T ss_dssp STTCCCSCEEEEEEEETTEEEEEEEEGGGCCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEEEGGGCHHHH
T ss_pred ecCCCCcccccceehhhcCceEEEEeccccCCcCEEEEEEccccchHHHHHHHHHHHHcCCEEEEEEEEEEccCcchHHH
Confidence 88888877777777777777778876555679999999999999999999999999999999999999999998889999
Q ss_pred cC--CCCccccc
Q 025851 237 LG--EKPLFVLV 246 (247)
Q Consensus 237 L~--~~pv~sL~ 246 (247)
|+ ++|+++|+
T Consensus 174 l~~~g~~v~sl~ 185 (190)
T 2dy0_A 174 LEKQGITSYSLV 185 (190)
T ss_dssp HHTTTCEEEEEE
T ss_pred HhhCCCcEEEEE
Confidence 97 67899886
No 3
>1qb7_A APRT, adenine phosphoribosyltransferase; dinucleotide binding fold; HET: ADE CIT; 1.50A {Leishmania donovani} SCOP: c.61.1.1 PDB: 1qb8_A* 1qcc_A* 1qcd_A 1mzv_A*
Probab=100.00 E-value=9.2e-34 Score=249.38 Aligned_cols=173 Identities=31% Similarity=0.576 Sum_probs=158.1
Q ss_pred CChHHHHHhcccccC-CCCCCCCc-eEEechhhccCHHHHHHHHHHHHHHhccC--CccEEEecCCcchhHHHHHHHHhC
Q 025851 74 QDPRIAGISSAIRVI-PDFPKPGI-MFQDITTLLLDTKAFRDTIDLFVERYKDK--NISVVAGIEARGFIFGPPIALAIG 149 (247)
Q Consensus 74 ~~~~~~~l~~~ir~~-p~fp~~gi-~f~Di~~ll~dp~~~~~l~~~La~~~~~~--~iDvVVgve~rGf~lA~~LA~~Lg 149 (247)
.++..+.|++.||++ ||||++|+ +|+|++.++.+|+.++.+++.|++.+.+. ++|+|+|++.|||++|..+|+.+|
T Consensus 15 ~~~~~~~l~~~i~~~~~dfp~~gip~~~D~~~ll~~~~~~~~~~~~la~~i~~~~~~~d~Ivgv~~gG~~~a~~lA~~L~ 94 (236)
T 1qb7_A 15 SHALSQLLKKSYRWYSPVFSPRNVPRFADVSSITESPETLKAIRDFLVQRYRAMSPAPTHILGFDARGFLFGPMIAVELE 94 (236)
T ss_dssp TSHHHHHHHHHCCEECGGGSSSCSSSEECTHHHHTCHHHHHHHHHHHHHHHHHCSSCCSEEEEETTGGGGTHHHHHHHHT
T ss_pred ChHHHHHHHHHhcccCCCCCCCCCEeEEEhHhhcCCHHHHHHHHHHHHHHHHhhCCCCCEEEEECcCcHHHHHHHHHHhC
Confidence 467788999999999 99999999 99999999999999999999999998775 789999999999999999999999
Q ss_pred CCeEEeeccCCCCCcee-eeeeeecc---ccceeEEeecccCCCCEEEEEecchhhhHHHHHHHHHHHhCCCeEEEEEEE
Q 025851 150 AKFVPMRKPKKLPGEVI-SEEYSLEY---GKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACV 225 (247)
Q Consensus 150 ~p~v~iRK~~kl~~~~~-s~~y~~e~---g~~~~~l~~~~~~~GkrVLIVDDIltTG~Tl~aa~~lLk~aGa~vV~v~vl 225 (247)
+|++++||.++.++.+. +.+|..+| +++.++++.+.+.+|++||||||++|||+|+.+++++|+++|+++++++++
T Consensus 95 ~p~~~~rk~~k~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~~~Gk~VLIVDDvitTG~Tl~~a~~~L~~~Ga~~v~v~~l 174 (236)
T 1qb7_A 95 IPFVLMRKADKNAGLLIRSEPYEKEYKEAAPEVMTIRYGSIGKGSRVVLIDDVLATGGTALSGLQLVEASDAVVVEMVSI 174 (236)
T ss_dssp CCEEEEBCGGGCCSSEEECCCCCCCTTSCCCCCCEEETTSSCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred CCEEEEEEecCCCCcceeceeccchhhhcCcceEEEecCCCCCcCEEEEEecccccHHHHHHHHHHHHHcCCeEEEEEEE
Confidence 99999999888887776 66676666 566788876666799999999999999999999999999999999999999
Q ss_pred EeccCcccccccC--------CCCccccc
Q 025851 226 IELPELKGRERLG--------EKPLFVLV 246 (247)
Q Consensus 226 v~~~~~~grekL~--------~~pv~sL~ 246 (247)
+++.+.+|+++|. ++|+++|+
T Consensus 175 ~~~~~~~g~~~l~~~~~~~~~g~~v~sl~ 203 (236)
T 1qb7_A 175 LSIPFLKAAEKIHSTANSRYKDIKFISLL 203 (236)
T ss_dssp EECGGGCHHHHHHHHHHHTTTTCCEEEEE
T ss_pred EEcccccHHHHHhhhcccccCCCcEEEEE
Confidence 9999888999997 78999886
No 4
>1zn8_A APRT, adenine phosphoribosyltransferase; glycosyltransferase, purine salvage; HET: AMP; 1.76A {Homo sapiens} SCOP: c.61.1.1 PDB: 1ore_A* 1zn7_A* 1zn9_A*
Probab=100.00 E-value=1.9e-33 Score=236.34 Aligned_cols=172 Identities=44% Similarity=0.830 Sum_probs=155.3
Q ss_pred ChHHHHHhcccccCCCCCCCCceEEechhhccCHHHHHHHHHHHHHHhccC---CccEEEecCCcchhHHHHHHHHhCCC
Q 025851 75 DPRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDK---NISVVAGIEARGFIFGPPIALAIGAK 151 (247)
Q Consensus 75 ~~~~~~l~~~ir~~p~fp~~gi~f~Di~~ll~dp~~~~~l~~~La~~~~~~---~iDvVVgve~rGf~lA~~LA~~Lg~p 151 (247)
++.++.|++.||.+|+||++|++|.|+..++.+|+.++.+++.|++.+... ++|+|++++.|||++|..+|..+++|
T Consensus 3 ~~~~~~l~~~i~~~~~~p~~g~~~~d~~~~l~~~~~~~~la~~l~~~~~~~~~~~~d~vv~v~~~G~~~a~~la~~l~~p 82 (180)
T 1zn8_A 3 DSELQLVEQRIRSFPDFPTPGVVFRDISPVLKDPASFRAAIGLLARHLKATHGGRIDYIAGLDSRGFLFGPSLAQELGLG 82 (180)
T ss_dssp CHHHHHHHTTCEEEETCSSTTCEEEECHHHHHSHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTTHHHHHHHHHHHHTCE
T ss_pred hHHHHHHHHHHhcCCCCCcCCeEEEecHHHhcCHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHhCCC
Confidence 455778999999999999999999999999999999999999999888653 38999999999999999999999999
Q ss_pred eEEeeccCCCCCceeeeeeeeccccceeEEeecccCCCCEEEEEecchhhhHHHHHHHHHHHhCCCeEEEEEEEEeccCc
Q 025851 152 FVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPEL 231 (247)
Q Consensus 152 ~v~iRK~~kl~~~~~s~~y~~e~g~~~~~l~~~~~~~GkrVLIVDDIltTG~Tl~aa~~lLk~aGa~vV~v~vlv~~~~~ 231 (247)
++.+||.++.++...+..++.+++.+.+++..+...+|++|||||||+|||+|+.++++.|+++|++++.+++++++++.
T Consensus 83 ~~~~r~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~~l~~~~~~ 162 (180)
T 1zn8_A 83 CVLIRKRGKLPGPTLWASYSLEYGKAELEIQKDALEPGQRVVVVDDLLATGGTMNAACELLGRLQAEVLECVSLVELTSL 162 (180)
T ss_dssp EEEEEETTCCCSSEEEEEEEETTEEEEEEEETTSSCTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEEEGGG
T ss_pred EEEEEecCCCCcccccHHHHHhcCccEEEEeccccCCCCEEEEEcCCcccHHHHHHHHHHHHHcCCEEEEEEEEEEccCc
Confidence 98888877777777777777777777788765555799999999999999999999999999999999999999999988
Q ss_pred ccccccCCCCccccc
Q 025851 232 KGRERLGEKPLFVLV 246 (247)
Q Consensus 232 ~grekL~~~pv~sL~ 246 (247)
+|+++|+++|+++|+
T Consensus 163 ~~~~~l~~~~~~sl~ 177 (180)
T 1zn8_A 163 KGREKLAPVPFFSLL 177 (180)
T ss_dssp CHHHHHTTSCEEEEE
T ss_pred chhhhhcCCceEEEE
Confidence 899999999999986
No 5
>1l1q_A Adenine phosphoribosyltransferase; aprtase, giardia lamblia, purine metabolism, cataly transferase; HET: 9DA; 1.85A {Giardia intestinalis} SCOP: c.61.1.1 PDB: 1l1r_A*
Probab=100.00 E-value=1e-32 Score=233.81 Aligned_cols=171 Identities=38% Similarity=0.626 Sum_probs=152.7
Q ss_pred hHHHHHhcccccCCCCCCCCceEEechhhccCHHHHHHHHHHHHHHhccCCccEEEecCCcchhHHHHHHHHhCCCeEEe
Q 025851 76 PRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPM 155 (247)
Q Consensus 76 ~~~~~l~~~ir~~p~fp~~gi~f~Di~~ll~dp~~~~~l~~~La~~~~~~~iDvVVgve~rGf~lA~~LA~~Lg~p~v~i 155 (247)
+..+.|++.+|.+|+||++|+.|.|+..++.+++.++.+++.|++.+...++|+|++++.|||++|..+|+.+|+|++.+
T Consensus 3 ~~~~~l~~~~~~~p~~p~~g~~~~d~~~~l~~~~~~~~l~~~la~~~~~~~~d~Iv~vp~rG~~~A~~la~~l~~p~~~~ 82 (186)
T 1l1q_A 3 MSVADAHALIKTIPDFPTKGIAFKDLSDILSTPAALDAVRKEVTAHYKDVPITKVVGIESRGFILGGIVANSLGVGFVAL 82 (186)
T ss_dssp CCHHHHHHTCEEETTCSSTTCCEEECHHHHTCHHHHHHHHHHHHHHTTTSCCCEEEEESGGGHHHHHHHHHHHTCEEEEE
T ss_pred hhHHHHHhhhccCCCCCCCCeEEEEhHHHhCCHHHHHHHHHHHHHHhhccCCCEEEEcCcccHHHHHHHHHHhCCCEEEE
Confidence 45677999999999999999999999999999999999999999988766789999999999999999999999999998
Q ss_pred eccCCCCCceeeeeeeeccccc-eeEEeecccCCCCEEEEEecchhhhHHHHHHHHHHHhCCCe--EEEEEEEEeccCcc
Q 025851 156 RKPKKLPGEVISEEYSLEYGKD-VMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVH--VVECACVIELPELK 232 (247)
Q Consensus 156 RK~~kl~~~~~s~~y~~e~g~~-~~~l~~~~~~~GkrVLIVDDIltTG~Tl~aa~~lLk~aGa~--vV~v~vlv~~~~~~ 232 (247)
||+++.++.+...+|+.+++.. .+++..+...+|++|||||||+|||+|+.++++.|+++|++ ++++++++++++.+
T Consensus 83 rk~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~gk~VLLVDDVitTG~Tl~aa~~~L~~~Ga~~~~V~~~~l~~k~~~~ 162 (186)
T 1l1q_A 83 RKAGKLPGDVCKCTFDMEYQKGVTIEVQKRQLGPHDVVLLHDDVLATGGTLLAAIELCETAGVKPENIYINVLYEIEALK 162 (186)
T ss_dssp EETTSSCSSEEEEEEEETTEEEEEEEEEGGGCCTTCCEEEEEEEESSSHHHHHHHHHHHHTTCCGGGEEEEEEEECGGGC
T ss_pred EecCCCCCceechhhhhhcCcceEEEEecccCCCcCEEEEEecccccHHHHHHHHHHHHHcCCCcceEEEEEEEEccCcc
Confidence 9888777776666666555544 67776555569999999999999999999999999999999 99999999999889
Q ss_pred cccccCCCCccccc
Q 025851 233 GRERLGEKPLFVLV 246 (247)
Q Consensus 233 grekL~~~pv~sL~ 246 (247)
|+++|.+.++.+|.
T Consensus 163 g~~~l~~~~~~~~~ 176 (186)
T 1l1q_A 163 GREKVGQKCTRLFS 176 (186)
T ss_dssp HHHHHTTTCCCEEE
T ss_pred HHHHHhhcCcceeh
Confidence 99999998877663
No 6
>1y0b_A Xanthine phosphoribosyltransferase; purine metabolism, STRU genomics, PSI, protein structure initative, midwest center structural genomics; HET: G4P; 1.80A {Bacillus subtilis} SCOP: c.61.1.1 PDB: 2fxv_A*
Probab=99.93 E-value=4.6e-25 Score=187.57 Aligned_cols=167 Identities=21% Similarity=0.296 Sum_probs=134.5
Q ss_pred hHHHHHhcccccCCCCCCCCceEEe-chhhccCHHHHHHHHHHHHHHhccCCccEEEecCCcchhHHHHHHHHhCCCeEE
Q 025851 76 PRIAGISSAIRVIPDFPKPGIMFQD-ITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVP 154 (247)
Q Consensus 76 ~~~~~l~~~ir~~p~fp~~gi~f~D-i~~ll~dp~~~~~l~~~La~~~~~~~iDvVVgve~rGf~lA~~LA~~Lg~p~v~ 154 (247)
...+.|.+..++.++ +++|.| +.+...+++.++.+++.|++.+...++|+|++++.|||++|..+|+.+++|++.
T Consensus 6 ~l~~~l~~~~~~~~g----~~l~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~d~Iv~v~~rG~~~a~~la~~l~~p~~~ 81 (197)
T 1y0b_A 6 ALKRKIEEEGVVLSD----QVLKVDSFLNHQIDPLLMQRIGDEFASRFAKDGITKIVTIESSGIAPAVMTGLKLGVPVVF 81 (197)
T ss_dssp HHHHHHHHHCEEETT----TEEECTTTTSSEECHHHHHHHHHHHHHHTTTTTCCEEEEETTTTHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHhhCCEecCC----CEEEehhhhcccCCHHHHHHHHHHHHHHhhcCCCCEEEEEcccCHHHHHHHHHHhCCCEEE
Confidence 456677777777776 555543 344568999999999999999886678999999999999999999999999998
Q ss_pred eeccCCCC--Cceeee-eeeeccc-cceeEEeecccCCCCEEEEEecchhhhHHHHHHHHHHHhCCCeEEEEEEEEeccC
Q 025851 155 MRKPKKLP--GEVISE-EYSLEYG-KDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPE 230 (247)
Q Consensus 155 iRK~~kl~--~~~~s~-~y~~e~g-~~~~~l~~~~~~~GkrVLIVDDIltTG~Tl~aa~~lLk~aGa~vV~v~vlv~~~~ 230 (247)
+||+++.+ +.+... .+..+++ ...+++..+...+|++|||||||+|||+|+.+++++|+++|++++.+++++++++
T Consensus 82 ~rk~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~gk~VllVDDvitTG~Tl~~a~~~L~~~Ga~~V~~~~l~~~~~ 161 (197)
T 1y0b_A 82 ARKHKSLTLTDNLLTASVYSFTKQTESQIAVSGTHLSDQDHVLIIDDFLANGQAAHGLVSIVKQAGASIAGIGIVIEKSF 161 (197)
T ss_dssp EBSSCCSSCCSSEEEEEEEETTTTEEEEEEEEGGGCCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEEETT
T ss_pred EEecCCCCCCCceEEEeeeccccCceEEEEEeccccCCcCEEEEEEcccccCHHHHHHHHHHHHCCCEEEEEEEEEEecc
Confidence 88877655 344332 2322222 2346665445569999999999999999999999999999999999999999988
Q ss_pred cccccccC--CCCccccc
Q 025851 231 LKGRERLG--EKPLFVLV 246 (247)
Q Consensus 231 ~~grekL~--~~pv~sL~ 246 (247)
.+|+++|+ +.|+++|+
T Consensus 162 ~~~~~~l~~~~~~~~sl~ 179 (197)
T 1y0b_A 162 QPGRDELVKLGYRVESLA 179 (197)
T ss_dssp STHHHHHHHTTCCEEEEE
T ss_pred cchhhhHHhcCCcEEEEE
Confidence 88999997 57888875
No 7
>1o57_A PUR operon repressor; purine operon repressor, helix-turn-helix domain, phosphoribosyltranseferases, domain recombination, DNA binding; HET: EPE P6G 2PE PG4 1PE; 2.20A {Bacillus subtilis} SCOP: a.4.5.40 c.61.1.1 PDB: 1p4a_A*
Probab=99.92 E-value=2.1e-24 Score=195.38 Aligned_cols=163 Identities=23% Similarity=0.404 Sum_probs=131.7
Q ss_pred ChHHHHHhcccccCCCCCCCCceEEechhhccCHHHHHHHHHHHHHHhccCCccEEEecCCcchhHHHHHHHHhCCCeEE
Q 025851 75 DPRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVP 154 (247)
Q Consensus 75 ~~~~~~l~~~ir~~p~fp~~gi~f~Di~~ll~dp~~~~~l~~~La~~~~~~~iDvVVgve~rGf~lA~~LA~~Lg~p~v~ 154 (247)
+...+.|.+..+..|+ + |.++..++.+|+.++.+++.|++.+.+.++|+|++++.|||++|..+|+.+|+|+++
T Consensus 85 ~~l~~~l~~~~~v~~G----~--f~~~~~ll~~p~l~~~la~~la~~~~~~~~d~Iv~V~~rG~~~A~~lA~~L~vp~v~ 158 (291)
T 1o57_A 85 QTLGQSLANPERILPG----G--YVYLTDILGKPSVLSKVGKLFASVFAEREIDVVMTVATKGIPLAYAAASYLNVPVVI 158 (291)
T ss_dssp HHHHHHHTCGGGEETT----T--EECCTTTTTCHHHHHHHHHHHHHHTTTSCCSEEEEETTTTHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHCCCcccC----C--eEEehhhhCCHHHHHHHHHHHHHHhhccCCCEEEEECCCCHHHHHHHHHHhCCCEEE
Confidence 4566777777777777 4 568999999999999999999999987779999999999999999999999999999
Q ss_pred eeccCCC-CCceeeeeeeecc--ccceeEEeecccCCCCEEEEEecchhhhHHHHHHHHHHHhCCCeEEEEEEEEeccCc
Q 025851 155 MRKPKKL-PGEVISEEYSLEY--GKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPEL 231 (247)
Q Consensus 155 iRK~~kl-~~~~~s~~y~~e~--g~~~~~l~~~~~~~GkrVLIVDDIltTG~Tl~aa~~lLk~aGa~vV~v~vlv~~~~~ 231 (247)
+||.++. ++.+++.+|.... ..+.+++....+.+|++|||||||+|||+|+.+++++|+++||+++++++++++.+.
T Consensus 159 ~rk~~~~t~~~~~~~~~~~g~~~~~~~~~l~~~~l~~Gk~VLIVDDViTTG~Tl~~a~~~L~~aGA~vV~v~vlvdr~~~ 238 (291)
T 1o57_A 159 VRKDNKVTEGSTVSINYVSGSSNRIQTMSLAKRSMKTGSNVLIIDDFMKAGGTINGMINLLDEFNANVAGIGVLVEAEGV 238 (291)
T ss_dssp EBCC-----CCEEEEEEECSSCCSEEEEEEEGGGSCTTCEEEEEEEEESSSHHHHHHHHHTGGGTCEEEEEEEEEEESSC
T ss_pred EEEeccCCCCceeeeeeecccccceeeEEEecccCCCcCEEEEEEEEcCcHHHHHHHHHHHHHCCCEEEEEEEEEEcCcc
Confidence 9887664 4555555553211 113566665556799999999999999999999999999999999999999999863
Q ss_pred ccccccCCCCccccc
Q 025851 232 KGRERLGEKPLFVLV 246 (247)
Q Consensus 232 ~grekL~~~pv~sL~ 246 (247)
++++. .|++||+
T Consensus 239 --~~~l~-~~~~SL~ 250 (291)
T 1o57_A 239 --DERLV-DEYMSLL 250 (291)
T ss_dssp --TTSCC-SCCEEEE
T ss_pred --ccccC-CceEEEE
Confidence 55554 6888875
No 8
>1vch_A Phosphoribosyltransferase-related protein; structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.94A {Thermus thermophilus} SCOP: c.61.1.1
Probab=99.92 E-value=4.6e-25 Score=183.96 Aligned_cols=157 Identities=20% Similarity=0.254 Sum_probs=126.1
Q ss_pred HhcccccCCCCCCC-CceEEechhhccCHHHHHHHHHHHHHHhccCCccEEEecCCcchhHHHHHHHHhCCCeEEeeccC
Q 025851 81 ISSAIRVIPDFPKP-GIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPK 159 (247)
Q Consensus 81 l~~~ir~~p~fp~~-gi~f~Di~~ll~dp~~~~~l~~~La~~~~~~~iDvVVgve~rGf~lA~~LA~~Lg~p~v~iRK~~ 159 (247)
|++.+|.+|+||.+ |+ |.|...+..+++..+.+++.|++.+.. ++|+|++++.||+++|..+|+.+++|++.+||++
T Consensus 8 ~~~~~~~~~~~~~~~g~-~i~~~k~~~~~~~~~~~~~~la~~~~~-~~d~Iv~v~~gg~~~a~~la~~l~~p~~~~rk~~ 85 (175)
T 1vch_A 8 VGGVTRHVPLIEPLPGR-RIPLVEFLGDPEFTRAAAEALRPLVPK-EAEILFTTETSPIPLTHVLAEALGLPYVVARRRR 85 (175)
T ss_dssp ETTEEEEECEEEEETTE-EEECCCCTTCHHHHHHHHHHHGGGSCT-TCCEEEEESSTHHHHHHHHHHHHTCCEEEEBSSC
T ss_pred ecceeeEcCceEcCCCc-EEEeeeccCCHHHHHHHHHHHHHHhcc-CCCEEEEeCCcChHHHHHHHHHhCCCEEEEEecC
Confidence 77899999999987 75 589999999999999999999998876 7899999999999999999999999998888776
Q ss_pred CC--CCceeeeeeeeccc-cceeEEeeccc--CCCCEEEEEecchhhhHHHHHHHHHHHhCCCeEEEEEEEEeccCcccc
Q 025851 160 KL--PGEVISEEYSLEYG-KDVMEMHVGAV--QAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGR 234 (247)
Q Consensus 160 kl--~~~~~s~~y~~e~g-~~~~~l~~~~~--~~GkrVLIVDDIltTG~Tl~aa~~lLk~aGa~vV~v~vlv~~~~~~gr 234 (247)
+. +.......+..+++ .+.+++..+.. .+|++|||||||+|||+|+.+++++|+++|++++.++++++++..
T Consensus 86 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~v~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~V~~~~l~~~~~~--- 162 (175)
T 1vch_A 86 RPYMEDPIIQEVQTLTLGVGEVLWLDRRFAEKLLNQRVVLVSDVVASGETMRAMEKMVLRAGGHVVARLAVFRQGTP--- 162 (175)
T ss_dssp CTTCCSCEEEECCC------CEEEECHHHHHHHTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECSCC---
T ss_pred CCCCCcceeeeeeccccCCceEEEEecccccccCCCEEEEEeccccchHHHHHHHHHHHHcCCeEEEEEEEEecCCC---
Confidence 53 22222222221121 23565543332 489999999999999999999999999999999999999998642
Q ss_pred cccCCCCccccc
Q 025851 235 ERLGEKPLFVLV 246 (247)
Q Consensus 235 ekL~~~pv~sL~ 246 (247)
+.|+++|.
T Consensus 163 ----~~~~~sl~ 170 (175)
T 1vch_A 163 ----GLAVDTVA 170 (175)
T ss_dssp ----SSCCEEEE
T ss_pred ----CcceEEEE
Confidence 56777765
No 9
>3m3h_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, structural genomics, infectious diseases; 1.75A {Bacillus anthracis} PDB: 3osc_A*
Probab=99.91 E-value=7.2e-24 Score=186.60 Aligned_cols=149 Identities=20% Similarity=0.338 Sum_probs=119.6
Q ss_pred cccCC--CCC-CCCc---eEEechhhccCHHHHHHHHHHHHHHhccC--CccEEEecCCcchhHHHHHHHHhCCCeEEee
Q 025851 85 IRVIP--DFP-KPGI---MFQDITTLLLDTKAFRDTIDLFVERYKDK--NISVVAGIEARGFIFGPPIALAIGAKFVPMR 156 (247)
Q Consensus 85 ir~~p--~fp-~~gi---~f~Di~~ll~dp~~~~~l~~~La~~~~~~--~iDvVVgve~rGf~lA~~LA~~Lg~p~v~iR 156 (247)
++.-| .|- +.|. .|.|...++.+|+.++.+++.|++.+.+. ++|+|+|++.+|+++|..+|..+++|++++|
T Consensus 39 v~f~~~g~F~l~SG~~Sp~Y~d~~~~~~~p~~~~~l~~~la~~i~~~~~~~D~Ivg~~~gGi~~a~~lA~~L~~p~~~vr 118 (234)
T 3m3h_A 39 VFLQPNDPFTWSSGMKSPIYCDNRLTLSYPKVRQTIAAGLEELIKEHFPTVEVIAGTATAGIAHAAWVSDRMDLPMCYVR 118 (234)
T ss_dssp EEECTTSCEECTTSCEESEEECGGGGGGCHHHHHHHHHHHHHHHHHHCTTCCEEEEC---CHHHHHHHHHHHTCCEEEEC
T ss_pred EEECCCCCEEcCcCCcCCEEEeCHHhccCHHHHHHHHHHHHHHHHHhCCCCCEEEEeccchHHHHHHHHHHcCCCEEEEE
Confidence 44444 455 6677 79999999999999999999999998764 7899999999999999999999999999999
Q ss_pred ccCCCCCceeeeeeeeccccceeEEeecccCCCCEEEEEecchhhhHHHHHHHHHHHhCCCeEEEEEEEEeccCcccccc
Q 025851 157 KPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRER 236 (247)
Q Consensus 157 K~~kl~~~~~s~~y~~e~g~~~~~l~~~~~~~GkrVLIVDDIltTG~Tl~aa~~lLk~aGa~vV~v~vlv~~~~~~grek 236 (247)
|..|.++... .+ .+.+.+|++||||||++|||+|+.+++++|+++|++++++++++++...+|+++
T Consensus 119 k~~k~~G~~~-----------~i---~g~~~~Gk~VLIVDDvitTG~Tl~~a~~~L~~~Ga~vv~v~~l~~~~~~~~~e~ 184 (234)
T 3m3h_A 119 SKAKGHGKGN-----------QI---EGKAEKGQKVVVVEDLISTGGSAITCVEALREAGCEVLGIVSIFTYELEAGKEK 184 (234)
T ss_dssp ---------C-----------CE---ESCCCTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECCCHHHHHH
T ss_pred EeeccCCcce-----------EE---ecccCCCCEEEEEecccchhHHHHHHHHHHHHCCCEEEEEEEEEECcCchHHHH
Confidence 8776443210 11 245679999999999999999999999999999999999999999987788999
Q ss_pred cC--CCCcccccC
Q 025851 237 LG--EKPLFVLVS 247 (247)
Q Consensus 237 L~--~~pv~sL~~ 247 (247)
|+ ++|+++|+.
T Consensus 185 l~~~gi~v~sL~~ 197 (234)
T 3m3h_A 185 LEAANVASYSLSD 197 (234)
T ss_dssp HHHTTCCEEESSC
T ss_pred HHhcCCCEEEEee
Confidence 84 689999863
No 10
>3dez_A OPRT, oprtase, orotate phosphoribosyltransferase; glycosyltransferase, MAGN pyrimidine biosynthesis; 2.40A {Streptococcus mutans}
Probab=99.90 E-value=1.5e-23 Score=185.52 Aligned_cols=149 Identities=24% Similarity=0.365 Sum_probs=123.4
Q ss_pred cccCC--CCC-CCCc---eEEechhhccCHHHHHHHHHHHHHHhccC--CccEEEecCCcchhHHHHHHHHhCCCeEEee
Q 025851 85 IRVIP--DFP-KPGI---MFQDITTLLLDTKAFRDTIDLFVERYKDK--NISVVAGIEARGFIFGPPIALAIGAKFVPMR 156 (247)
Q Consensus 85 ir~~p--~fp-~~gi---~f~Di~~ll~dp~~~~~l~~~La~~~~~~--~iDvVVgve~rGf~lA~~LA~~Lg~p~v~iR 156 (247)
++..| .|- +.|. .|.|+..++.+|+.++.+++.|++.+.+. ++|+|+|++.+|+++|..+|+.|++|++++|
T Consensus 51 v~~~~~g~F~L~SG~~Sp~Y~d~~~~l~~p~~~~~l~~~la~~i~~~~~~~DvIvg~~~gGi~~A~~lA~~L~~p~~~vr 130 (243)
T 3dez_A 51 VYLKPEEPFTWASGIKSPIYTDNRITLSYPETRTLIENGFVETIKEAFPEVEVIAGTATAGIPHGAIIADKMNLPLAYIR 130 (243)
T ss_dssp EEECTTSCEEC---CEESEEECTTGGGGCHHHHHHHHHHHHHHHHHHCTTCCEEEEETTTTHHHHHHHHHHTTCCEEEEC
T ss_pred EEEcCCCcEEeCCCCCCCEEEeCHHhccCHHHHHHHHHHHHHHHHhhCCCCCEEEEecCchHHHHHHHHHHcCCCEEEEE
Confidence 44444 455 5676 79999999999999999999999998764 7999999999999999999999999999999
Q ss_pred ccCCCCCceeeeeeeeccccceeEEeecccCCCCEEEEEecchhhhHHHHHHHHHHHhCCCeEEEEEEEEeccCcccccc
Q 025851 157 KPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRER 236 (247)
Q Consensus 157 K~~kl~~~~~s~~y~~e~g~~~~~l~~~~~~~GkrVLIVDDIltTG~Tl~aa~~lLk~aGa~vV~v~vlv~~~~~~grek 236 (247)
|..|.++... .+ .+.+.+|++||||||++|||+|+.+++++|+++|++++++++++++.+.+|+++
T Consensus 131 k~~k~~G~~~-----------~i---eg~~~~Gk~VLIVDDvitTG~Tl~~a~~~L~~~Ga~vv~v~~l~d~~~~~a~e~ 196 (243)
T 3dez_A 131 SKPKDHGAGN-----------QI---EGRVTKGQKMVIIEDLISTGGSVLDAVAAAQREGADVLGVVAIFTYELPKATAN 196 (243)
T ss_dssp SSCC-----C-----------CE---ESCCCTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECCCHHHHHH
T ss_pred EeeccCCcee-----------EE---EeccCCCCEEEEEEeeccccHHHHHHHHHHHHCCCEEEEEEEEEECCCchHHHH
Confidence 8876543210 11 245679999999999999999999999999999999999999999987788999
Q ss_pred cC--CCCcccccC
Q 025851 237 LG--EKPLFVLVS 247 (247)
Q Consensus 237 L~--~~pv~sL~~ 247 (247)
|+ ++++++|+.
T Consensus 197 l~~~gi~~~sL~~ 209 (243)
T 3dez_A 197 FEKASVKLVTLSN 209 (243)
T ss_dssp HHHHTCCEEESSC
T ss_pred HHhcCCCEEEEee
Confidence 85 588888863
No 11
>2yzk_A OPRT, oprtase, orotate phosphoribosyltransferase; rossmann fold, glycosyltransferase, magnesium, pyrimidine biosynthesis, structural genomics; 1.80A {Aeropyrum pernix}
Probab=99.90 E-value=2.8e-23 Score=174.75 Aligned_cols=134 Identities=24% Similarity=0.355 Sum_probs=114.1
Q ss_pred eEEechhhccCHHHHHHHHHHHHHHh-ccC-CccEEEecCCcchhHHHHHHHHhCCCeEEeeccCCCCCceeeeeeeecc
Q 025851 97 MFQDITTLLLDTKAFRDTIDLFVERY-KDK-NISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEY 174 (247)
Q Consensus 97 ~f~Di~~ll~dp~~~~~l~~~La~~~-~~~-~iDvVVgve~rGf~lA~~LA~~Lg~p~v~iRK~~kl~~~~~s~~y~~e~ 174 (247)
.|.|+..++.+|++.+.+++.+++.+ .+. ++|+|+|++.|||++|..+|+.+++|++++||..+. |
T Consensus 27 ~f~d~~~l~~~~~~~~~l~~~l~~~~~~~~~~~~~iv~v~~~G~~~a~~la~~l~~p~~~~r~~~~~------------~ 94 (178)
T 2yzk_A 27 VYIDMRRLLGDESSYSVALDLLLEVGGQDLARSSAVIGVATGGLPWAAMLALRLSKPLGYVRPERKG------------H 94 (178)
T ss_dssp EEECGGGGTTCHHHHHHHHHHHHHHHHHHHHHCSEEEEETTTTHHHHHHHHHHHTCCEEEECCCCTT------------S
T ss_pred eEEEChHhccCHHHHHHHHHHHHHHHhcccCCCCEEEEecccchHHHHHHHHHHCCCEEEEEccccc------------c
Confidence 58999999999999999999999988 653 589999999999999999999999999888876531 1
Q ss_pred ccceeEEeecccCCCCEEEEEecchhhhHHHHHHHHHHHhCCCeEEEEEEEEeccCcccccccC--CCCccccc
Q 025851 175 GKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLG--EKPLFVLV 246 (247)
Q Consensus 175 g~~~~~l~~~~~~~GkrVLIVDDIltTG~Tl~aa~~lLk~aGa~vV~v~vlv~~~~~~grekL~--~~pv~sL~ 246 (247)
+.... + .+. .+|++|||||||+|||+|+.+++++|+++|++++.+++++++++ +|+++|+ ++|+++|+
T Consensus 95 g~~~~-i-~~~-~~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~~l~~r~~-~~~~~l~~~g~~~~sl~ 164 (178)
T 2yzk_A 95 GTLSQ-V-EGD-PPKGRVVVVDDVATTGTSIAKSIEVLRSNGYTVGTALVLVDRGE-GAGELLARMGVRLVSVA 164 (178)
T ss_dssp CCCCC-C-BTC-CCSSEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECCS-SHHHHHHTTTCEEEEEE
T ss_pred Cccce-e-ccc-CCCCEEEEEEeccCCcHHHHHHHHHHHHcCCeEEEEEEEEEcCc-CHHHHHHHcCCcEEEEe
Confidence 11110 1 133 38999999999999999999999999999999999999999986 7888885 57888876
No 12
>2p1z_A Phosphoribosyltransferase; STRU genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 2.44A {Corynebacterium diphtheriae}
Probab=99.89 E-value=2.8e-23 Score=175.12 Aligned_cols=156 Identities=20% Similarity=0.240 Sum_probs=116.3
Q ss_pred HHHHHhcccccCCCCC-CCCc---eEEechhhccCHHHHHHHHHHHHHHhccCCccEEEecCCcchhHHHHHHHHhCCCe
Q 025851 77 RIAGISSAIRVIPDFP-KPGI---MFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKF 152 (247)
Q Consensus 77 ~~~~l~~~ir~~p~fp-~~gi---~f~Di~~ll~dp~~~~~l~~~La~~~~~~~iDvVVgve~rGf~lA~~LA~~Lg~p~ 152 (247)
.++.|+...-...+|- ++|. .|.|+..++.+|+..+.+++.|++.+.+.++|+|+|++.+|+++|..+|+.+++|+
T Consensus 10 l~~ll~~~a~~~g~f~l~SG~~s~~y~d~~~~~~~~~~~~~l~~~la~~i~~~~~d~vv~v~~gG~~~a~~la~~l~~~~ 89 (180)
T 2p1z_A 10 LAELVKELAVVHGKVTLSSGKEADYYVDLRRATLHARASRLIGELLRELTADWDYVAVGGLTLGADPVATSVMHADGREI 89 (180)
T ss_dssp HHHHHHHHTC---------------CCCTHHHHTSHHHHHHHHHHHHHTTTTSCCSEEEEETTTHHHHHHHHHHSSSSCC
T ss_pred HHHHHHhCCeEeCcEEECCCCcCCEEEEChhhcCCHHHHHHHHHHHHHHHhhcCCCEEEEecCCCHHHHHHHHHHHCCCC
Confidence 3444443222234565 3343 68899999999999999999999998777899999999999999999999998764
Q ss_pred --EEeeccCCCCCceeeeeeeeccccceeEEeecccCCCCEEEEEecchhhhHHHHHHHHHHHhCCCeEEEEEEEEeccC
Q 025851 153 --VPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPE 230 (247)
Q Consensus 153 --v~iRK~~kl~~~~~s~~y~~e~g~~~~~l~~~~~~~GkrVLIVDDIltTG~Tl~aa~~lLk~aGa~vV~v~vlv~~~~ 230 (247)
+++||..+. ++... .+ .+...+|++|||||||+|||+|+.+++++|+++|++++++++++++++
T Consensus 90 ~~~~~rk~~~~------------~g~~~-~~-~g~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~~l~~~~~ 155 (180)
T 2p1z_A 90 HAFVVRKEAKK------------HGMQR-RI-EGPDVVGKKVLVVEDTTTTGNSPLTAVKALREAGAEVVGVATVVDRAT 155 (180)
T ss_dssp EEEEECSCCC-------------CC-CC-SE-ESSCCTTCEEEEEEEECSSSHHHHHHHHHHHHHTCEEEEEEEEEC-CC
T ss_pred CeEEEEecccc------------ccchh-hc-cCCCCCcCEEEEEEeccCCcHHHHHHHHHHHHcCCeEEEEEEEEEcCc
Confidence 566655321 11111 01 134478999999999999999999999999999999999999999985
Q ss_pred cccccccC--CCCcccccC
Q 025851 231 LKGRERLG--EKPLFVLVS 247 (247)
Q Consensus 231 ~~grekL~--~~pv~sL~~ 247 (247)
+|+++|+ ++|++||++
T Consensus 156 -~g~~~l~~~g~~~~sl~~ 173 (180)
T 2p1z_A 156 -GAADVIAAEGLEYRYILG 173 (180)
T ss_dssp -CHHHHHHTTTCCEEEEEC
T ss_pred -chHHHHHhcCCeEEEEEE
Confidence 8899884 689999863
No 13
>2wns_A Orotate phosphoribosyltransferase; alternative splicing, multifunctional enzyme, lyase, polymorphism, decarboxylase, phosphoprotein; HET: OMP; 1.90A {Homo sapiens}
Probab=99.89 E-value=1e-22 Score=175.04 Aligned_cols=135 Identities=18% Similarity=0.407 Sum_probs=115.8
Q ss_pred eEEechhhccCHHHHHHHHHHHHHHhcc--CCccEEEecCCcchhHHHHHHHHhCCCeEEeeccCCCCCceeeeeeeecc
Q 025851 97 MFQDITTLLLDTKAFRDTIDLFVERYKD--KNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEY 174 (247)
Q Consensus 97 ~f~Di~~ll~dp~~~~~l~~~La~~~~~--~~iDvVVgve~rGf~lA~~LA~~Lg~p~v~iRK~~kl~~~~~s~~y~~e~ 174 (247)
.|.|+..++.+|+.++.+++.|++.+.. .++|+|+|++.+|+++|..+|..+++|++++||..+. +
T Consensus 31 ~y~d~~~l~~~~~~~~~l~~~la~~i~~~~~~~d~Iv~v~~~g~~~a~~la~~l~~p~~~~rk~~k~------------~ 98 (205)
T 2wns_A 31 IYIDLRGIVSRPRLLSQVADILFQTAQNAGISFDTVCGVPYTALPLATVICSTNQIPMLIRRKETKD------------Y 98 (205)
T ss_dssp EEECGGGGGGSHHHHHHHHHHHHHHHHHTTCCCSEEEECTTTTHHHHHHHHHHHTCCEEEECCTTTT------------S
T ss_pred EEEeChHhcCCHHHHHHHHHHHHHHHHhhCCCCCEEEEcCCchHHHHHHHHHHHCcCEEEEecCcCc------------c
Confidence 7899999999999999999999998875 5789999999999999999999999999988776541 1
Q ss_pred ccceeEEeecccCCCCEEEEEecchhhhHHHHHHHHHHHhCCCeEEEEEEEEeccCcccccccC--CCCccccc
Q 025851 175 GKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLG--EKPLFVLV 246 (247)
Q Consensus 175 g~~~~~l~~~~~~~GkrVLIVDDIltTG~Tl~aa~~lLk~aGa~vV~v~vlv~~~~~~grekL~--~~pv~sL~ 246 (247)
+.... + .+.+.+|++||||||++|||+|+.++++.|+++|++++++++++++. .+|+++|+ ++|+++|+
T Consensus 99 g~~~~-~-~g~~~~gk~VliVDDvitTG~Tl~~a~~~L~~~Ga~~v~~~~l~~~~-~~~~~~l~~~g~~v~sl~ 169 (205)
T 2wns_A 99 GTKRL-V-EGTINPGETCLIIEDVVTSGSSVLETVEVLQKEGLKVTDAIVLLDRE-QGGKDKLQAHGIRLHSVC 169 (205)
T ss_dssp SSCCS-E-ESCCCTTCBEEEEEEEESSSHHHHHHHHHHHHTTCBCCEEEEEEECC-SSHHHHHHTTTCEEEEEE
T ss_pred Ccccc-c-cCCCCCCCEEEEEEEeccccHHHHHHHHHHHHCCCEEEEEEEEEEcC-cchHHHHHHcCCeEEEEE
Confidence 21111 1 24556899999999999999999999999999999999999999995 67888885 57888875
No 14
>3qw4_B UMP synthase; N-terminal orotidine monophosphate decarboxylase domain C-TE orotate phosphoribosyltransferase domain, transferase, LYAS; HET: U5P; 3.00A {Leishmania donovani}
Probab=99.89 E-value=1.1e-22 Score=194.15 Aligned_cols=156 Identities=21% Similarity=0.339 Sum_probs=128.4
Q ss_pred hHHHHHhcccc-cCCCCC-CCCc---eEEechhhccCHHHHHHHHHHHHHHhccCCccEEEecCCcchhHHHHHHHHhCC
Q 025851 76 PRIAGISSAIR-VIPDFP-KPGI---MFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGA 150 (247)
Q Consensus 76 ~~~~~l~~~ir-~~p~fp-~~gi---~f~Di~~ll~dp~~~~~l~~~La~~~~~~~iDvVVgve~rGf~lA~~LA~~Lg~ 150 (247)
..++.|.+.-. .+++|. ++|. +|.|+..++.+|+.++.+++.|++.+.+.++|+|+|++.+|+++|..+|+.+|+
T Consensus 261 ~~~~~l~~~~a~~~g~F~L~SG~~S~~y~D~~~l~~~p~~~~~l~~~la~~~~~~~~D~Ivg~~~gGi~~A~~lA~~L~~ 340 (453)
T 3qw4_B 261 ELAKALVDSHCVRFGNFTLKSGKSSPIYIDLRRLVTYPAIMRLVAREYAKVLRHYKFDRIAGLPYAALPIASAISNEMNV 340 (453)
T ss_dssp HHHHHHHHTTSEEESCCBCTTSSBCSEEECCGGGGGCHHHHHHHHHHHHHHHTTSCCSEEEECTTTTHHHHHHHHHHHCC
T ss_pred HHHHHHHHCCCCEECCEeccCCCcCCEEEechHhccCHHHHHHHHHHHHHHhccCCCCEEEeccCCcHHHHHHHHHHhCC
Confidence 34444444332 356798 7888 699999999999999999999999998778999999999999999999999999
Q ss_pred CeEEeeccCCCCCceeeeeeeeccccceeEEeecccCCCCEEEEEecchhhhHHHHHHHHHHHhCCCeEEEEEEEEeccC
Q 025851 151 KFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPE 230 (247)
Q Consensus 151 p~v~iRK~~kl~~~~~s~~y~~e~g~~~~~l~~~~~~~GkrVLIVDDIltTG~Tl~aa~~lLk~aGa~vV~v~vlv~~~~ 230 (247)
|++++||..+. |++... ..+.+.+|++||||||++|||+|+.+++++|+++|++++++++++++.
T Consensus 341 p~~~~rk~~k~------------~g~~~~--i~g~~~~G~~VliVDDvitTG~T~~~~~~~l~~~g~~vv~v~~lvdr~- 405 (453)
T 3qw4_B 341 PLIYPRREAKI------------YGTKAA--IEGEYKKGDRVVIIDDLVSTGETKVEAIEKLRSAGLEVVSIVVLVDRD- 405 (453)
T ss_dssp CEEEESSCC-------------------C--EESCCCTTCEEEEEEEEECC-CCHHHHHHHHHTTTCEEEEEEEEEECS-
T ss_pred CEEEEEeeccc------------cCcCce--EecccCCCCEEEEEeeeechhHHHHHHHHHHHHcCCEEEEEEEEEECC-
Confidence 99999987652 222211 124457999999999999999999999999999999999999999997
Q ss_pred cccccccC--CCCccccc
Q 025851 231 LKGRERLG--EKPLFVLV 246 (247)
Q Consensus 231 ~~grekL~--~~pv~sL~ 246 (247)
.+|+++|+ ++|++||+
T Consensus 406 ~~g~~~l~~~g~~v~sL~ 423 (453)
T 3qw4_B 406 MGAKAFLNKLGYDFEAVV 423 (453)
T ss_dssp SSHHHHHHHTTCCEEEEE
T ss_pred cchHHHHHhcCCCEEEEe
Confidence 58898884 68999986
No 15
>1lh0_A OMP synthase; loop closure, monomer closure, orotate phosphoribosyltransferase; HET: ORO PRP; 2.00A {Salmonella typhimurium} SCOP: c.61.1.1 PDB: 1opr_A* 1sto_A* 1oro_A
Probab=99.88 E-value=1.4e-22 Score=175.32 Aligned_cols=133 Identities=18% Similarity=0.332 Sum_probs=113.9
Q ss_pred eEEechhhccCHHHHHHHHHHHHHHhcc--CCccEEEecCCcchhHHHHHHHHh------CCCeEEeeccCCCCCceeee
Q 025851 97 MFQDITTLLLDTKAFRDTIDLFVERYKD--KNISVVAGIEARGFIFGPPIALAI------GAKFVPMRKPKKLPGEVISE 168 (247)
Q Consensus 97 ~f~Di~~ll~dp~~~~~l~~~La~~~~~--~~iDvVVgve~rGf~lA~~LA~~L------g~p~v~iRK~~kl~~~~~s~ 168 (247)
.|.| ..++.+|+.++.+++.|++.+.+ .++|+|+|++.+|+++|..+|+.+ ++|++++||..+.++..
T Consensus 33 ~y~d-~~ll~~~~~~~~~~~~la~~i~~~~~~~d~Ivgv~~~G~~~a~~lA~~L~~~~~~~~~~~~~rk~~~~~~~~--- 108 (213)
T 1lh0_A 33 YFFN-AGLFNTGRDLALLGRFYAEALVDSGIEFDLLFGPAYKGIPIATTTAVALAEHHDKDLPYCFNRKEAKDHGEG--- 108 (213)
T ss_dssp EEEC-GGGCCBHHHHHHHHHHHHHHHHHHCCCCSEEECCTTTHHHHHHHHHHHHHHHHCCCCBEEEECSSCCSSTTC---
T ss_pred EEEe-cCccCCHHHHHHHHHHHHHHHHHhCCCCCEEEEcCCCcHHHHHHHHHHHHHhhCCCCCEEEEEeccCccCCC---
Confidence 7889 67999999999999999998875 368999999999999999999999 89999998876533210
Q ss_pred eeeeccccceeEEeecccCCCCEEEEEecchhhhHHHHHHHHHHHhCCCeEEEEEEEEeccCccccccc---------CC
Q 025851 169 EYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL---------GE 239 (247)
Q Consensus 169 ~y~~e~g~~~~~l~~~~~~~GkrVLIVDDIltTG~Tl~aa~~lLk~aGa~vV~v~vlv~~~~~~grekL---------~~ 239 (247)
..++ +...+| +|||||||+|||+|+.+++++|+++|++++++++++++.+ +|+++| .+
T Consensus 109 --------~~~~---g~~~~g-~VliVDDvitTG~Tl~~a~~~l~~~Ga~~v~v~~l~dr~~-~g~~~l~~~~~~~~~~g 175 (213)
T 1lh0_A 109 --------GSLV---GSALQG-RVMLVDDVITAGTAIRESMEIIQAHGATLAGVLISLDRQE-RGRGEISAIQEVERDYG 175 (213)
T ss_dssp --------SSEE---ESCCCS-EEEEECSCCSSSCHHHHHHHHHHHTTCEEEEEEEEEECCB-BCSSSSBHHHHHHHHHC
T ss_pred --------Ccee---CCCCCC-CEEEEEecccchHHHHHHHHHHHHCCCeEEEEEEEEEccc-CcccchhhHHHHHHHcC
Confidence 1111 334689 9999999999999999999999999999999999999987 788877 47
Q ss_pred CCccccc
Q 025851 240 KPLFVLV 246 (247)
Q Consensus 240 ~pv~sL~ 246 (247)
+|++||+
T Consensus 176 ~~v~sl~ 182 (213)
T 1lh0_A 176 CKVISII 182 (213)
T ss_dssp CEEEEEE
T ss_pred CCeEEEE
Confidence 8999886
No 16
>2ps1_A Orotate phosphoribosyltransferase 1; alpha beta, oprtase-OA-PRPP complex; HET: ORO PRP; 1.75A {Saccharomyces cerevisiae} PDB: 2pry_A* 2prz_A*
Probab=99.87 E-value=4.7e-22 Score=173.31 Aligned_cols=134 Identities=17% Similarity=0.278 Sum_probs=112.7
Q ss_pred eEEechhhccCHHHHHHHHHHHHHHhcc--CCccEEEecCCcchhHHHHHHHHh---------CCCeEEeeccCCCCCce
Q 025851 97 MFQDITTLLLDTKAFRDTIDLFVERYKD--KNISVVAGIEARGFIFGPPIALAI---------GAKFVPMRKPKKLPGEV 165 (247)
Q Consensus 97 ~f~Di~~ll~dp~~~~~l~~~La~~~~~--~~iDvVVgve~rGf~lA~~LA~~L---------g~p~v~iRK~~kl~~~~ 165 (247)
.|.| ..++.+|+.++.+++.|++.+.+ .++|+|++++.+||++|..+|+.+ ++|++++||.++..
T Consensus 37 ~y~d-~~ll~~~~~~~~l~~~la~~i~~~~~~~d~Vvg~~~~G~~~a~~lA~~L~~~~~~~~~~~p~~~~rk~~k~~--- 112 (226)
T 2ps1_A 37 YFFN-LGLFNTGKLLSNLATAYAIAIIQSDLKFDVIFGPAYKGIPLAAIVCVKLAEIGGSKFQNIQYAFNRKEAKDH--- 112 (226)
T ss_dssp EEEC-GGGCCBHHHHHHHHHHHHHHHHHHTCCCSEEEECTTTHHHHHHHHHHHHHHHSTTTTTTCEEEEEEEEEESS---
T ss_pred EEEe-cCccCCHHHHHHHHHHHHHHHHHhCCCCCEEEEeccCCHHHHHHHHHHHHhhhccccCCCCEEEEechhhhc---
Confidence 7889 57999999999999999998875 368999999999999999999999 99999888765422
Q ss_pred eeeeeeeccccceeEEeecccCCCCEEEEEecchhhhHHHHHHHHHHHhCCCeEEEEEEEEeccCccccc----c-----
Q 025851 166 ISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRE----R----- 236 (247)
Q Consensus 166 ~s~~y~~e~g~~~~~l~~~~~~~GkrVLIVDDIltTG~Tl~aa~~lLk~aGa~vV~v~vlv~~~~~~gre----k----- 236 (247)
+++.+.. +...+|++|||||||+|||+|+.+++++|+++|++++++++++++.+. |++ +
T Consensus 113 ---------g~~~~~~--~~~i~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga~~v~v~~l~dr~~~-g~~~~~~~~~~~~ 180 (226)
T 2ps1_A 113 ---------GEGGIIV--GSALENKRILIIDDVMTAGTAINEAFEIISNAKGQVVGSIIALDRQEV-VSTDDKEGLSATQ 180 (226)
T ss_dssp ---------TTCEEEE--ESCCTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECCBB-SCTTCSSCCBHHH
T ss_pred ---------CCCceEe--cCCCCcCEEEEEEecccChHHHHHHHHHHHHcCCeEEEEEEEEEccCc-ccccccccchHHH
Confidence 2233332 233599999999999999999999999999999999999999999874 554 2
Q ss_pred ----cCCCCccccc
Q 025851 237 ----LGEKPLFVLV 246 (247)
Q Consensus 237 ----L~~~pv~sL~ 246 (247)
..++|++||+
T Consensus 181 ~~~~~~g~~v~sl~ 194 (226)
T 2ps1_A 181 TVSKKYGIPVLSIV 194 (226)
T ss_dssp HHHHHHTCCEEEEE
T ss_pred HHHHhcCCeEEEEe
Confidence 4578999986
No 17
>2aee_A OPRT, oprtase, orotate phosphoribosyltransferase; structural genomics, PSI, structure initiative; 1.95A {Streptococcus pyogenes} SCOP: c.61.1.1
Probab=99.87 E-value=8.2e-22 Score=169.77 Aligned_cols=136 Identities=25% Similarity=0.339 Sum_probs=115.3
Q ss_pred eEEechhhccCHHHHHHHHHHHHHHhcc--CCccEEEecCCcchhHHHHHHHHhCCCeEEeeccCCCCCceeeeeeeecc
Q 025851 97 MFQDITTLLLDTKAFRDTIDLFVERYKD--KNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEY 174 (247)
Q Consensus 97 ~f~Di~~ll~dp~~~~~l~~~La~~~~~--~~iDvVVgve~rGf~lA~~LA~~Lg~p~v~iRK~~kl~~~~~s~~y~~e~ 174 (247)
.|.|+..++.+|+.++.+++.|++.+.. .++|+|+|++.||+++|..+|+.+++|++++||.++.++..
T Consensus 37 ~~~D~~~l~~~~~~~~~~~~~la~~i~~~~~~~d~vv~v~~~g~~~a~~la~~l~~p~~~~rk~~~~~g~~--------- 107 (211)
T 2aee_A 37 IYTDNRVTLSYPKTRDLIENGFVETIKAHFPEVEVIAGTATAGIPHGAIIADKMTLPFAYIRSKPKDHGAG--------- 107 (211)
T ss_dssp EEECGGGGGGCHHHHHHHHHHHHHHHHHHCTTCCEEEEETTTTHHHHHHHHHHHTCCEEEECSSCC----C---------
T ss_pred eEEeChhhcCCHHHHHHHHHHHHHHHHhhCCCCCEEEEeccCcHHHHHHHHHHhCCCEEEEEeecCCcCCc---------
Confidence 6899999999999999999999998864 36799999999999999999999999999988876533211
Q ss_pred ccceeEEeecccCCCCEEEEEecchhhhHHHHHHHHHHHhCCCeEEEEEEEEeccCcccccccC--CCCccccc
Q 025851 175 GKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLG--EKPLFVLV 246 (247)
Q Consensus 175 g~~~~~l~~~~~~~GkrVLIVDDIltTG~Tl~aa~~lLk~aGa~vV~v~vlv~~~~~~grekL~--~~pv~sL~ 246 (247)
..+ .+...+|++||||||++|||+|+.+++++|+++|+++++++++++++..+|.++|. ++|+++++
T Consensus 108 --~~i---~g~~~~gk~VliVDDvitTG~Tl~~a~~~L~~~Ga~~v~v~~l~~~~~~~~~~~l~~~~~~~~~l~ 176 (211)
T 2aee_A 108 --NQI---EGRVLKGQKMVIIEDLISTGGSVLDAAAAASREGADVLGVVAIFTYELPKASQNFKEAGIKLITLS 176 (211)
T ss_dssp --CSE---ESCCCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEECCCHHHHHHHHHHTCCEEESC
T ss_pred --cee---cCCCCCcCEEEEEeecccchHHHHHHHHHHHHCCCcEEEEEEEEecccccHHHHHHhCCCCEEEEe
Confidence 111 13457899999999999999999999999999999999999999998778888885 46777765
No 18
>3mjd_A Orotate phosphoribosyltransferase; IDP02311, csgid, structural genomics, center for structural genomics of infectious diseases; 1.90A {Francisella tularensis}
Probab=99.87 E-value=1e-21 Score=172.73 Aligned_cols=138 Identities=19% Similarity=0.288 Sum_probs=112.2
Q ss_pred CCCc---eEEechhhccCHHHHHHHHHHHHHHhcc--CCccEEEecCCcchhHHHHHHHHh------CCCeEEeeccCCC
Q 025851 93 KPGI---MFQDITTLLLDTKAFRDTIDLFVERYKD--KNISVVAGIEARGFIFGPPIALAI------GAKFVPMRKPKKL 161 (247)
Q Consensus 93 ~~gi---~f~Di~~ll~dp~~~~~l~~~La~~~~~--~~iDvVVgve~rGf~lA~~LA~~L------g~p~v~iRK~~kl 161 (247)
+.|. .|.|. .++.+|+.++.+++.|++.+.+ .++|+|+|++.+|+++|..+|..| ++|++++||..|.
T Consensus 44 ~SG~~Sp~y~d~-~~~~~p~~~~~l~~~la~~i~~~~~~~D~Ivg~~~gGi~~A~~lA~~L~~~~g~~~p~~~~RK~~k~ 122 (232)
T 3mjd_A 44 KSGRISPYFFNA-GLFNTGAQLATLADYYAQLIIKSDVKYDILFGPAYKGIPLVAAISTVLALKYNIDMPYAFDRKEAKD 122 (232)
T ss_dssp TTSCEEEEEECG-GGCCBHHHHHHHHHHHHHHHHHCCCCCSEEEECTTTHHHHHHHHHHHHHHHHCCCCBEEEECCC---
T ss_pred cCCCccceEecc-cccCCHHHHHHHHHHHHHHHHhcCCCCCEEEEecCCcHHHHHHHHHHHhhhcCCCCcEEEEEeeccc
Confidence 4455 78898 4679999999999999999976 369999999999999999999997 8999999987653
Q ss_pred CCceeeeeeeeccccceeEEeecccCCCCEEEEEecchhhhHHHHHHHHHHHhCCCeEEEEEEEEeccCcccc-------
Q 025851 162 PGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGR------- 234 (247)
Q Consensus 162 ~~~~~s~~y~~e~g~~~~~l~~~~~~~GkrVLIVDDIltTG~Tl~aa~~lLk~aGa~vV~v~vlv~~~~~~gr------- 234 (247)
.+.. ..+ .+...+|++|||||||+|||+|+.+++++|+++|++++++++++++.+ +|+
T Consensus 123 ~g~~-----------~~i---~g~~~~Gk~VLIVDDVitTG~Tl~~a~~~L~~~Ga~vv~v~vlvdr~e-~g~~~~~~a~ 187 (232)
T 3mjd_A 123 HGEG-----------GVF---VGADMTNKKVLLIDDVMTAGTAFYESYNKLKIINAKIAGVVLSIDRQE-KAKDSDISAT 187 (232)
T ss_dssp ---------------CCE---EESCCTTCEEEEECSCCSSSHHHHHHHHHHHTTTCEEEEEEEEEECCB-CCTTSSSCHH
T ss_pred CCCC-----------ceE---eccCCCCCEEEEEEeeccccHHHHHHHHHHHHCCCEEEEEEEEEECCc-CCccccchhH
Confidence 3210 011 133468999999999999999999999999999999999999999984 666
Q ss_pred -ccc--CCCCccccc
Q 025851 235 -ERL--GEKPLFVLV 246 (247)
Q Consensus 235 -ekL--~~~pv~sL~ 246 (247)
+.+ .++|++||+
T Consensus 188 ~~~~~~~gv~v~sL~ 202 (232)
T 3mjd_A 188 KKISQDFNIPVLAVT 202 (232)
T ss_dssp HHHHHHHCCCEEEEE
T ss_pred HHHHHHcCCcEEEEE
Confidence 444 368999886
No 19
>3n2l_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, infectious diseases; 2.10A {Vibrio cholerae}
Probab=99.86 E-value=1.2e-21 Score=172.81 Aligned_cols=133 Identities=20% Similarity=0.325 Sum_probs=108.7
Q ss_pred eEEechhhccCHHHHHHHHHHHHHHhcc--CCccEEEecCCcchhHHHHHHHHh------CCCeEEeeccCCCCCceeee
Q 025851 97 MFQDITTLLLDTKAFRDTIDLFVERYKD--KNISVVAGIEARGFIFGPPIALAI------GAKFVPMRKPKKLPGEVISE 168 (247)
Q Consensus 97 ~f~Di~~ll~dp~~~~~l~~~La~~~~~--~~iDvVVgve~rGf~lA~~LA~~L------g~p~v~iRK~~kl~~~~~s~ 168 (247)
.|.|. .++.+|+.++.+++.|++.+.+ .++|+|+|++.+|+++|..+|..| ++|++++||..|.++..
T Consensus 58 ~y~d~-~ll~~p~~l~~l~~~la~~i~~~~~~~D~Vvg~~~gGi~~A~~lA~~L~~~~g~~vp~~~~RK~~k~~g~~--- 133 (238)
T 3n2l_A 58 YFFNA-GLFNTGRDLARLGRFYAAALVDSGIEFDVLFGPAYKGIPIATTTAVALADHHDVDTPYCFNRKEAKNHGEG--- 133 (238)
T ss_dssp EEECG-GGCCBHHHHHHHHHHHHHHHHHHTCCCSEEEECTTTHHHHHHHHHHHHHHHSCCCCBEEEECCC----------
T ss_pred EEEEC-CCCCCHHHHHHHHHHHHHHHHhhCCCCCEEEecccChHHHHHHHHHHHhHhhCCCccEEEEeeccCCCCCC---
Confidence 78897 5889999999999999999875 379999999999999999999997 89999999887654321
Q ss_pred eeeeccccceeEEeecccCCCCEEEEEecchhhhHHHHHHHHHHHhCCCeEEEEEEEEeccCccccccc---------CC
Q 025851 169 EYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL---------GE 239 (247)
Q Consensus 169 ~y~~e~g~~~~~l~~~~~~~GkrVLIVDDIltTG~Tl~aa~~lLk~aGa~vV~v~vlv~~~~~~grekL---------~~ 239 (247)
..++ +...+| +||||||++|||+|+.+++++|+++|++++++++++++.+ +|++.+ .+
T Consensus 134 --------~~i~---G~~~~G-~VliVDDvitTG~T~~~a~~~l~~~Ga~vv~v~vlvdr~e-gG~~~l~a~~~~~~~~G 200 (238)
T 3n2l_A 134 --------GNLV---GSKLEG-RVMLVDDVITAGTAIRESMELIQANKADLAGVLVAIDRQE-KGKGELSAIQEVERDFG 200 (238)
T ss_dssp ---------CEE---ESCCCS-EEEEECSCCSSSHHHHHHHHHHHHTTCEEEEEEEEEECCC-BCSSSSBHHHHHHHHHC
T ss_pred --------ceEe---ccccCC-cEEEEeeeecccHHHHHHHHHHHHcCCEEEEEEEEEEccc-CccchhhHHHHHHHHcC
Confidence 1111 334689 9999999999999999999999999999999999999974 555432 36
Q ss_pred CCccccc
Q 025851 240 KPLFVLV 246 (247)
Q Consensus 240 ~pv~sL~ 246 (247)
+|++||+
T Consensus 201 v~v~SL~ 207 (238)
T 3n2l_A 201 CAVISIV 207 (238)
T ss_dssp CEEEEEE
T ss_pred CCEEEEE
Confidence 8898886
No 20
>3hvu_A Hypoxanthine phosphoribosyltransferase; hypoxanthine-guanine phosphoribosyltransferase, 2-(N-morphol ethanesulfonic acid (MES), IDP01892; HET: MES; 1.95A {Bacillus anthracis str} PDB: 3h83_A* 3kb8_A*
Probab=99.83 E-value=1.7e-20 Score=161.93 Aligned_cols=135 Identities=16% Similarity=0.232 Sum_probs=106.9
Q ss_pred ccCCCCCCCCceEEechhhccCHHHHHHHHHHHHHHhcc---CCccEEEecCCcchhHHHHHHHHhCCCe--EEeeccCC
Q 025851 86 RVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKD---KNISVVAGIEARGFIFGPPIALAIGAKF--VPMRKPKK 160 (247)
Q Consensus 86 r~~p~fp~~gi~f~Di~~ll~dp~~~~~l~~~La~~~~~---~~iDvVVgve~rGf~lA~~LA~~Lg~p~--v~iRK~~k 160 (247)
..-|+||++|++..|++.++.+++.++..++.|++++.+ .+.++|||++.||+.+|..+|+.+++|+ ..+++..
T Consensus 15 ~~~~~f~~~~~~~~di~~~l~s~~~i~~~i~~LA~~I~~~~~~~~~vVVgi~~GG~~~a~~La~~L~~p~~~~~i~~~~- 93 (204)
T 3hvu_A 15 TENLYFQSNAMMNQDIEKVLISEEQIQEKVLELGAIIAEDYKNTVPLAIGVLKGAMPFMADLLKRTDTYLEMDFMAVSS- 93 (204)
T ss_dssp ----CCCCCCCGGGGEEEEEECHHHHHHHHHHHHHHHHHHTSSSCCEEEEETTTTHHHHHHHHHTCCSCCEEEEEEEEE-
T ss_pred CCCCCCCCchhhhhcCCcEeCCHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcchHHHHHHHHHHhCCCcceEEEEEEE-
Confidence 346899999999999999999999999999999987754 2579999999999999999999999984 2343321
Q ss_pred CCCceeeeeeee-ccccceeEEeec--ccCCCCEEEEEecchhhhHHHHHHHHHHHhCCCeEEEEEEEEeccC
Q 025851 161 LPGEVISEEYSL-EYGKDVMEMHVG--AVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPE 230 (247)
Q Consensus 161 l~~~~~s~~y~~-e~g~~~~~l~~~--~~~~GkrVLIVDDIltTG~Tl~aa~~lLk~aGa~vV~v~vlv~~~~ 230 (247)
|.. ++..+.+++..+ ...+|++||||||+++||+|+.+++++|+++|++.+.++++++++.
T Consensus 94 ---------Y~~~~~~~~~v~i~~~l~~~~~gk~VliVDDii~TG~Tl~~~~~~l~~~g~~~v~~~~l~~k~~ 157 (204)
T 3hvu_A 94 ---------YGHSTVSTGEVKILKDLDTSVEGRDILIVEDIIDSGLTLSYLVDLFKYRKAKSVKIVTLLDKPT 157 (204)
T ss_dssp ---------CSGGGTTSCCEEEEECCSSCCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCSEEEEEEEEECGG
T ss_pred ---------ecCCCccCCcEEEEcCCCccCCCCEEEEEeceeCchHHHHHHHHHHHHcCCCEEEEEEEEECCC
Confidence 211 112223333322 2468999999999999999999999999999999999999999874
No 21
>1fsg_A HGPRTASE, hypoxanthine-guanine phosphoribosyltransferase; glycosyltransferase, purine salvage; HET: PRP 9DG; 1.05A {Toxoplasma gondii} SCOP: c.61.1.1 PDB: 1qk3_A* 1qk4_A* 1qk5_A* 1dbr_A
Probab=99.82 E-value=1.3e-20 Score=165.11 Aligned_cols=143 Identities=17% Similarity=0.127 Sum_probs=112.8
Q ss_pred CCCCCCCCceEEechhhccCHHHHHHHHHHHHHHhcc---CCccEEEecCCcchhHHHHHHHHhCCCeEEee-ccCCCCC
Q 025851 88 IPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKD---KNISVVAGIEARGFIFGPPIALAIGAKFVPMR-KPKKLPG 163 (247)
Q Consensus 88 ~p~fp~~gi~f~Di~~ll~dp~~~~~l~~~La~~~~~---~~iDvVVgve~rGf~lA~~LA~~Lg~p~v~iR-K~~kl~~ 163 (247)
..+||.||++|.|+..++.+++.++..++.|++++.+ .+.|+|+|++.||+++|..||++|+.++.+++ |+.+.|.
T Consensus 32 ~~~F~~~~~~~~di~~~l~~~~~i~~~~~~La~~i~~~~~~~~~vVvgi~~gG~~~a~~la~~L~~~~~~~~~k~~~~P~ 111 (233)
T 1fsg_A 32 ADDFLVPPHCKPYIDKILLPGGLVKDRVEKLAYDIHRTYFGEELHIICILKGSRGFFNLLIDYLATIQKYSGRESSVPPF 111 (233)
T ss_dssp GGGSCCCTTTTTTCCEEEECHHHHHHHHHHHHHHHHHHHTTSCEEEEEEETTTHHHHHHHHHHHHHHHHHCSSCCSSCSC
T ss_pred cccCccCCcchhhCcEEeeCHHHHHHHHHHHHHHHHHHcCCCCCEEEEEccCCHHHHHHHHHHhCCcccccccccCCCCc
Confidence 5679999999999999999999999999999988764 36899999999999999999999998655444 2333342
Q ss_pred c--eee-eeeeeccccceeEEeec--ccCCCCEEEEEecchhhhHHHHHHHHHHHhCCCeEEEEEEEEeccC
Q 025851 164 E--VIS-EEYSLEYGKDVMEMHVG--AVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPE 230 (247)
Q Consensus 164 ~--~~s-~~y~~e~g~~~~~l~~~--~~~~GkrVLIVDDIltTG~Tl~aa~~lLk~aGa~vV~v~vlv~~~~ 230 (247)
. ++. ..|..++..+.+++..+ ...+|++||||||+++||+|+.+++++|+++|++.+.++++++++.
T Consensus 112 ~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~Gk~VLIVDDii~TG~Tl~~a~~~L~~~ga~~V~vavl~~k~~ 183 (233)
T 1fsg_A 112 FEHYVRLKSYQNDNSTGQLTVLSDDLSIFRDKHVLIVEDIVDTGFTLTEFGERLKAVGPKSMRIATLVEKRT 183 (233)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSCGGGGTTCEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEEECC
T ss_pred EEEEEEEEeccCccccccEEEecCCccccCCCEEEEEccccCcHHHHHHHHHHHHhcCCCEEEEEEEEECCc
Confidence 1 222 23432223333444322 2368999999999999999999999999999999999999999874
No 22
>3ozf_A Hypoxanthine-guanine-xanthine phosphoribosyltrans; transferase-transferase inhibitor complex; HET: HPA; 1.94A {Plasmodium falciparum fcr-3} PDB: 3ozg_A* 1cjb_A*
Probab=99.79 E-value=8.3e-20 Score=162.13 Aligned_cols=140 Identities=16% Similarity=0.189 Sum_probs=116.6
Q ss_pred CCCCCceEEechhhccCHHHHHHHHHHHHHHhcc---CCccEEEecCCcchhHHHHHHHHhCCCeEE-eeccCCCCCce-
Q 025851 91 FPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKD---KNISVVAGIEARGFIFGPPIALAIGAKFVP-MRKPKKLPGEV- 165 (247)
Q Consensus 91 fp~~gi~f~Di~~ll~dp~~~~~l~~~La~~~~~---~~iDvVVgve~rGf~lA~~LA~~Lg~p~v~-iRK~~kl~~~~- 165 (247)
|..|..++.|+..++.+++.++..++.|++++.+ .+.++|+|++.|||.||..|++.|+.++++ +||.+++|.+.
T Consensus 49 f~~p~~~~~di~~vli~~~~I~~~i~~LA~~I~~~~~~~~~vVVgIl~gG~~fa~~La~~L~~~~v~~~rk~gklP~~v~ 128 (250)
T 3ozf_A 49 FMIPAHYKKYLTKVLVPNGVIKNRIEKLAYDIKKVYNNEEFHILCLLKGSRGFFTALLKHLSRIHNYSAVETSKPLFGEH 128 (250)
T ss_dssp SCCCGGGGGGEEEEEECHHHHHHHHHHHHHHHHHHHTTCCEEEEEEETTTHHHHHHHHHHHHHHHHHHCCTTCCCCEEEE
T ss_pred ccCchhhhccCeEEEECHHHHHHHHHHHHHHHHHHcCCCCCEEEEECcchHHHHHHHHHHhccccccccccccCCCceEE
Confidence 6666677789999999999999999999987753 257899999999999999999999977766 47777777543
Q ss_pred -e-eeeeeeccccceeEEeecc--cCCCCEEEEEecchhhhHHHHHHHHHHHhCCCeEEEEEEEEeccC
Q 025851 166 -I-SEEYSLEYGKDVMEMHVGA--VQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPE 230 (247)
Q Consensus 166 -~-s~~y~~e~g~~~~~l~~~~--~~~GkrVLIVDDIltTG~Tl~aa~~lLk~aGa~vV~v~vlv~~~~ 230 (247)
+ ..+|..+++++.+++..+. ..+|++|||||||++||+|+.+++++|++.|++.+.++++++++.
T Consensus 129 fI~~ssY~~~~s~g~v~i~~~~~~~~~gk~VlIVDDii~TG~Tl~~~~~~L~~~g~~~v~va~l~~k~~ 197 (250)
T 3ozf_A 129 YVRVKSYCNDQSTGTLEIVSEDLSCLKGKHVLIVEDIIDTGKTLVKFCEYLKKFEIKTVAIACLFIKRT 197 (250)
T ss_dssp EEEEEEEETTEEEEEEEEECCCGGGGTTCEEEEEEEEESSSHHHHHHHHHHGGGCCSEEEEEEEEEECC
T ss_pred EEEEEEecCCcccCcEEEEcCCccccCCCEEEEEeceeCchHHHHHHHHHHHhcCCCEEEEEEEEECCc
Confidence 2 3467656666667776432 358999999999999999999999999999999999999999974
No 23
>1z7g_A HGPRT, HGPRTASE, hypoxanthine-guanine phosphoribosyltransferase; flexibility, trans CIS peptide bond isomerization, nucleotide binding; 1.90A {Homo sapiens} SCOP: c.61.1.1 PDB: 1hmp_A* 1bzy_A 3gep_A* 3ggc_A* 3ggj_A* 1d6n_A* 2vfa_A*
Probab=99.78 E-value=3.2e-19 Score=154.66 Aligned_cols=134 Identities=16% Similarity=0.202 Sum_probs=104.2
Q ss_pred cCCCCCCCCceEEechhhccCHHHHHHHHHHHHHHhcc---CCccEEEecCCcchhHHHHHHHHhC---------CCe--
Q 025851 87 VIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKD---KNISVVAGIEARGFIFGPPIALAIG---------AKF-- 152 (247)
Q Consensus 87 ~~p~fp~~gi~f~Di~~ll~dp~~~~~l~~~La~~~~~---~~iDvVVgve~rGf~lA~~LA~~Lg---------~p~-- 152 (247)
..++||.||++|.|++.++.+++.++..++.|++++.. .+.++|+|++.||+++|..+|++|+ +|+
T Consensus 17 ~~~~f~~~~~~~~di~~il~~~~~~~~~~~~La~~i~~~~~~~~~vVvgi~~GG~~~a~~la~~L~~~~~i~~g~~~~~~ 96 (217)
T 1z7g_A 17 DLDLFCIPNHYAEDLERVFIPHGLIMDRTERLARDVMKEMGGHHIVALCVLKGGYKFFADLLDYIKALNRNSDRSIPMTV 96 (217)
T ss_dssp CGGGSCCCGGGTTTEEEEEECHHHHHHHHHHHHHHHHHHHTTSCEEEEEECSSCCHHHHHHHHHHHHHHTTCSSCCCEEE
T ss_pred cccccccCcccccccceEEECHHHHHHHHHHHHHHHHHHcCCCCCEEEEECCCCHHHHHHHHHHhCCccccCCCceEeee
Confidence 35689999999999999999999999999999988763 4689999999999999999999998 453
Q ss_pred EEeeccCCCCCceeeeeeeeccccceeEEee---cccCCCCEEEEEecchhhhHHHHHHHHHHHhCCCeEEEEEEEEecc
Q 025851 153 VPMRKPKKLPGEVISEEYSLEYGKDVMEMHV---GAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELP 229 (247)
Q Consensus 153 v~iRK~~kl~~~~~s~~y~~e~g~~~~~l~~---~~~~~GkrVLIVDDIltTG~Tl~aa~~lLk~aGa~vV~v~vlv~~~ 229 (247)
..++.. +|..++..+.+.+.. ....+|++||||||+++||+|+.+++++|++.|++.+.++++++++
T Consensus 97 ~~i~~~----------~y~~~~~~~~~~~~~~~~~~~~~gk~VliVDDii~TG~Tl~~~~~~L~~~g~~~v~~~~l~~k~ 166 (217)
T 1z7g_A 97 DFIRLK----------SYCNDQSTGDIKVIGGDDLSTLTGKNVLIVEDIIDTGKTMQTLLSLVRQYNPKMVKVASLLVKR 166 (217)
T ss_dssp EEECBC--------------------CCBCCSSCGGGGTTSEEEEEEEECCCHHHHHHHHHHHHTTCCSEEEEEEEEEEC
T ss_pred eeEEEE----------EecccccccceEEecCCCccccCCCEEEEEeceeCcHHHHHHHHHHHHhcCCCEEEEEEEEECc
Confidence 223211 121111112222221 1236899999999999999999999999999999999999999987
Q ss_pred C
Q 025851 230 E 230 (247)
Q Consensus 230 ~ 230 (247)
+
T Consensus 167 ~ 167 (217)
T 1z7g_A 167 T 167 (217)
T ss_dssp C
T ss_pred c
Confidence 5
No 24
>1vdm_A Purine phosphoribosyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Pyrococcus horikoshii} SCOP: c.61.1.1
Probab=99.76 E-value=4.2e-18 Score=138.64 Aligned_cols=120 Identities=20% Similarity=0.266 Sum_probs=92.5
Q ss_pred hccCHHHHHHHHHHHHHHhccCCccEEEecCCcchhHHHHHHHHhCCCeEE-eeccCCCCCceeeeeeeeccccceeEEe
Q 025851 104 LLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVP-MRKPKKLPGEVISEEYSLEYGKDVMEMH 182 (247)
Q Consensus 104 ll~dp~~~~~l~~~La~~~~~~~iDvVVgve~rGf~lA~~LA~~Lg~p~v~-iRK~~kl~~~~~s~~y~~e~g~~~~~l~ 182 (247)
++.+.+.++.+++.|++++.+.++|+|++++.||+++|..+|+.+++|++. +++......+. ......+...
T Consensus 4 ~~~s~~~~~~~~~~la~~i~~~~~d~iv~v~~gg~~~a~~la~~l~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~ 76 (153)
T 1vdm_A 4 VYLTWWQVDRAIFALAEKLREYKPDVIIGVARGGLIPAVRLSHILGDIPLKVIDVKFYKGIDE-------RGEKPVITIP 76 (153)
T ss_dssp EECCHHHHHHHHHHHHHHHHHHCCSEEEEETTTTHHHHHHHHHHTTSCCEEEEEEECCCC--C-------CCSSCEEEEC
T ss_pred eECCHHHHHHHHHHHHHHHHccCCCEEEEECCcCHHHHHHHHHHhCCCceEEEEEEEecCCcc-------cccceeEecc
Confidence 567888888999999988865578999999999999999999999999763 33221100000 0001123333
Q ss_pred ecccCCCCEEEEEecchhhhHHHHHHHHHHHhCCCeEEEEEEEEeccC
Q 025851 183 VGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPE 230 (247)
Q Consensus 183 ~~~~~~GkrVLIVDDIltTG~Tl~aa~~lLk~aGa~vV~v~vlv~~~~ 230 (247)
.....+|++||||||++|||+|+.+++++|+++|++.+.+++++.++.
T Consensus 77 ~~~~~~gk~VllVDDvitTG~Tl~~a~~~L~~~ga~~v~~~~l~~~~~ 124 (153)
T 1vdm_A 77 IHGDLKDKRVVIVDDVSDTGKTLEVVIEEVKKLGAKEIKIACLAMKPW 124 (153)
T ss_dssp CCSCCBTCEEEEEEEEESSCHHHHHHHHHHHTTTBSEEEEEEEEECTT
T ss_pred CCcCCCCCEEEEEecccCChHHHHHHHHHHHHcCCCEEEEEEEEeCCC
Confidence 334568999999999999999999999999999999999999998874
No 25
>1hgx_A HGXPRTASE, hypoxanthine-guanine-xanthine phosphoribosyltransferase; glycosyltransferase, purine salvage, transferase (glycosyltransferase); HET: 5GP; 1.90A {Tritrichomonas foetus} SCOP: c.61.1.1
Probab=99.76 E-value=3.6e-18 Score=143.67 Aligned_cols=123 Identities=13% Similarity=0.205 Sum_probs=95.3
Q ss_pred EEechhhccCHHHHHHHHHHHHHHhcc---CCccEEEecCCcchhHHHHHHHHhCCCeEE--eeccCCCCCceeeeeeee
Q 025851 98 FQDITTLLLDTKAFRDTIDLFVERYKD---KNISVVAGIEARGFIFGPPIALAIGAKFVP--MRKPKKLPGEVISEEYSL 172 (247)
Q Consensus 98 f~Di~~ll~dp~~~~~l~~~La~~~~~---~~iDvVVgve~rGf~lA~~LA~~Lg~p~v~--iRK~~kl~~~~~s~~y~~ 172 (247)
+.|++.++.+++.++.++..|++++.+ .+.|+|+|++.||+++|..+|+.+++|+.. ++... |..
T Consensus 7 ~~di~~~l~~~~~i~~~~~~la~~i~~~~~~~~~vvv~i~~gg~~~a~~la~~l~~p~~~~~~~~~~----------y~~ 76 (183)
T 1hgx_A 7 MDDLERVLYNQDDIQKRIRELAAELTEFYEDKNPVMICVLTGAVFFYTDLLKHLDFQLEPDYIICSS----------YSG 76 (183)
T ss_dssp CTTEEEEEECHHHHHHHHHHHHHHHHHHHTTTCCEEEEETTTTHHHHHHHHTTCCSCCEEEEEEEEC-------------
T ss_pred CcCcceEEcCHHHHHHHHHHHHHHHHHHcCCCCcEEEEeCcChHHHHHHHHHHcCCCcceeEEEEEe----------cCC
Confidence 358889999999999999999988864 268999999999999999999999999653 21111 100
Q ss_pred ccccceeEEee--cccCCCCEEEEEecchhhhHHHHHHHHHHHhCCCeEEEEEEEEeccC
Q 025851 173 EYGKDVMEMHV--GAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPE 230 (247)
Q Consensus 173 e~g~~~~~l~~--~~~~~GkrVLIVDDIltTG~Tl~aa~~lLk~aGa~vV~v~vlv~~~~ 230 (247)
++..+.+++.. ....+|++||||||+++||+|+.+++++|+++|++.+.++++++++.
T Consensus 77 ~~~~~~~~~~~~~~~~~~gk~VllVDDvi~TG~Tl~~a~~~L~~~ga~~v~~~~l~~~~~ 136 (183)
T 1hgx_A 77 TKSTGNLTISKDLKTNIEGRHVLVVEDIIDTGLTMYQLLNNLQMRKPASLKVCTLCDKDI 136 (183)
T ss_dssp ------CEEEECCSSCCTTSEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEEECC
T ss_pred cccccceEEeecCCCCCCCCEEEEECCccCCHHHHHHHHHHHHhcCCCEEEEEEEEecCc
Confidence 11111122221 23468999999999999999999999999999999999999998864
No 26
>2jbh_A Phosphoribosyltransferase domain-containing prote; glycosyltransferase, purine salvage; HET: 5GP; 1.7A {Homo sapiens}
Probab=99.75 E-value=3.3e-18 Score=148.97 Aligned_cols=131 Identities=19% Similarity=0.279 Sum_probs=101.7
Q ss_pred CCCCCCceEEechhhccCHHHHHHHHHHHHHHhcc---CCccEEEecCCcchhHHHHHHHHhC---------CCe--EEe
Q 025851 90 DFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKD---KNISVVAGIEARGFIFGPPIALAIG---------AKF--VPM 155 (247)
Q Consensus 90 ~fp~~gi~f~Di~~ll~dp~~~~~l~~~La~~~~~---~~iDvVVgve~rGf~lA~~LA~~Lg---------~p~--v~i 155 (247)
.||.||.+|.|+..++.+++.+...+..|++++.. .+.++|+|++.||+++|..+|+.|+ +|+ ..+
T Consensus 28 ~F~~~~~~~~di~~~l~~~~~i~~~~~~La~~i~~~~~~~~~vvv~i~~gG~~~a~~la~~L~~~~~~~~~~~p~~~~~i 107 (225)
T 2jbh_A 28 LFTYPQHYYGDLEYVLIPHGIIVDRIERLAKDIMKDIGYSDIMVLCVLKGGYKFXADLVEHLKNISRNSDRFVSMKVDFI 107 (225)
T ss_dssp GSCCCGGGTTSEEEEEECHHHHHHHHHHHHHHHHHHHTTSCEEEEEEETTTHHHHHHHHHHHHHHHHHSSCCCCEEEEEE
T ss_pred HCccCccccccCceEEECHHHHHHHHHHHHHHHHHHcCCCCCEEEEEcCCCEehhHHHHHHhhhhccccccCCCceEEEE
Confidence 48899998899999999999999999999987764 3679999999999999999999998 453 223
Q ss_pred eccCCCCCceeeeeeeeccccceeEEee--c-ccCCCCEEEEEecchhhhHHHHHHHHHHHhCCCeEEEEEEEEeccC
Q 025851 156 RKPKKLPGEVISEEYSLEYGKDVMEMHV--G-AVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPE 230 (247)
Q Consensus 156 RK~~kl~~~~~s~~y~~e~g~~~~~l~~--~-~~~~GkrVLIVDDIltTG~Tl~aa~~lLk~aGa~vV~v~vlv~~~~ 230 (247)
+.. .|..++..+.+.+.. . ...+|++||||||+++||+|+.+++++|++.|++.+.++++++++.
T Consensus 108 ~~~----------~y~~~~~~~~~~~~~~~~~~~v~Gk~VllVDDii~TG~Tl~~a~~~L~~~ga~~V~va~l~~k~~ 175 (225)
T 2jbh_A 108 RLK----------SYRNDQSMGEMQIIGGDDLSTLAGKNVLIVEDVVGTGRTMKALLSNIEKYKPNMIKVASLLVKRT 175 (225)
T ss_dssp EEC--------------------CCEESSSCGGGGTTSEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEEECC
T ss_pred EEE----------eccCccccccEEEecCCCccccCCCEEEEEccccCcHHHHHHHHHHHHhcCCCEEEEEEEEECCc
Confidence 221 121111112233322 1 2368999999999999999999999999999999999999999874
No 27
>3o7m_A Hypoxanthine phosphoribosyltransferase; hypoxanthine-guanine phosphoribosyltransferase, salvage of nucleosides and nucleotides; HET: GOL; 1.98A {Bacillus anthracis} SCOP: c.61.1.0
Probab=99.71 E-value=5.1e-17 Score=138.12 Aligned_cols=122 Identities=13% Similarity=0.227 Sum_probs=96.2
Q ss_pred EechhhccCHHHHHHHHHHHHHHhcc---CCccEEEecCCcchhHHHHHHHHhCCCeEE--eeccCCCCCceeeeeeee-
Q 025851 99 QDITTLLLDTKAFRDTIDLFVERYKD---KNISVVAGIEARGFIFGPPIALAIGAKFVP--MRKPKKLPGEVISEEYSL- 172 (247)
Q Consensus 99 ~Di~~ll~dp~~~~~l~~~La~~~~~---~~iDvVVgve~rGf~lA~~LA~~Lg~p~v~--iRK~~kl~~~~~s~~y~~- 172 (247)
.|++.++.+++.++..++.|++++.+ .+.++|+|++.||+.+|..+|+.+++|+.. ++.. +|..
T Consensus 6 ~di~~~l~~~~~i~~~i~~La~~I~~~~~~~~~vvVgi~~gG~~~a~~la~~L~~p~~i~~i~~~----------~Y~~~ 75 (186)
T 3o7m_A 6 IEIKDTLISEEQLQEKVKELALQIERDFEGEEIVVIAVLKGSFVFAADLIRHIKNDVTIDFISAS----------SYGNQ 75 (186)
T ss_dssp CEEEEEEECHHHHHHHHHHHHHHHHHHTTTSCEEEEEETTTTHHHHHHHHTTCCSCEEEEEEEEE----------ECC--
T ss_pred ccccEEecCHHHHHHHHHHHHHHHHHHcCCCCCEEEEECcchHHHHHHHHHHhCCCCceEEEEEE----------EecCC
Confidence 48899999999999999999987754 257999999999999999999999998632 3321 1211
Q ss_pred ccccceeEEeec--ccCCCCEEEEEecchhhhHHHHHHHHHHHhCCCeEEEEEEEEeccC
Q 025851 173 EYGKDVMEMHVG--AVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPE 230 (247)
Q Consensus 173 e~g~~~~~l~~~--~~~~GkrVLIVDDIltTG~Tl~aa~~lLk~aGa~vV~v~vlv~~~~ 230 (247)
....+.+++..+ ...+|++||||||+++||+|+.+++++|++.|++.+.++++++++.
T Consensus 76 ~~~~~~v~i~~~~~~~~~gk~VliVDDii~TG~Tl~~~~~~l~~~g~~~v~~~~l~~k~~ 135 (186)
T 3o7m_A 76 TETTGKVKLLKDIDVNITGKNVIVVEDIIDSGLTLHFLKDHFFMHKPKALKFCTLLDKPE 135 (186)
T ss_dssp -----CEEEEECCCSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGG
T ss_pred CcccCcEEEEecCCCCCCcCEEEEEcCeeCCcHHHHHHHHHHHhcCCcEEEEEEEEECCC
Confidence 011223343332 3468999999999999999999999999999999999999999873
No 28
>3lrt_A Ribose-phosphate pyrophosphokinase; phosphoribosyl transferase, ATP analog binding, ATP-binding, metal-binding, nucleotide biosynthesis; HET: ADP; 1.53A {Thermoplasma volcanium} PDB: 3lpn_A* 3nag_A* 3mbi_A*
Probab=99.71 E-value=5.6e-17 Score=146.46 Aligned_cols=115 Identities=24% Similarity=0.331 Sum_probs=93.7
Q ss_pred HHHHHHhccCCccEEEecCCcchhHHHHHHHHhCCCeEEeeccCCCCCceeeeeeeeccccceeEEee-cccCCCCEEEE
Q 025851 116 DLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHV-GAVQAGERALI 194 (247)
Q Consensus 116 ~~La~~~~~~~iDvVVgve~rGf~lA~~LA~~Lg~p~v~iRK~~kl~~~~~s~~y~~e~g~~~~~l~~-~~~~~GkrVLI 194 (247)
..|++++++.+.++||+++.||+.+|..+|+.||+|+++++|+++.++. +++.. ....+|++|||
T Consensus 143 ~~la~~i~~~~~~vVV~pd~Gg~~~A~~lA~~L~~p~~~i~K~r~~~g~--------------v~i~~~~~dv~gk~vli 208 (286)
T 3lrt_A 143 DAIVRYYKNVDVDYVVSPDDGGLARVADISAKLGKKHFFIEKKRIDDRT--------------VEMKVPNVDVNGKKLLI 208 (286)
T ss_dssp HHHHHHHTTSCCSEEEESSSSSHHHHHHHHHHHTCEEEEEEEEEETTEE--------------EEEEESCCCCTTCEEEE
T ss_pred HHHHHHHHhcCCCEEEEECCCccHHHHHHHHHhCCCeEEEeeeecCCCc--------------EEEeeccccCCcCEEEE
Confidence 3445555545789999999999999999999999999999887643321 22221 22368999999
Q ss_pred EecchhhhHHHHHHHHHHHhCCCeEEEEEEEEeccCcccccccCCCCcccc
Q 025851 195 VDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVL 245 (247)
Q Consensus 195 VDDIltTG~Tl~aa~~lLk~aGa~vV~v~vlv~~~~~~grekL~~~pv~sL 245 (247)
|||+++||+|+.+++++|++.|++.++++++++....++.++| +.++..+
T Consensus 209 VDDii~TG~Tl~~a~~~L~~~Ga~~v~~~~th~v~s~~a~~~l-~s~i~~v 258 (286)
T 3lrt_A 209 VDDIISTGGTIAKSSGLLREKGASKIYVSAVHGLFVNGSENKI-LQNADEI 258 (286)
T ss_dssp EEEEESSCHHHHHHHHHHHHTTCSEEEEEEEEECCCTTHHHHH-TTTCSEE
T ss_pred EeccccccHHHHHHHHHHHhCCCCEEEEEEEEeecCchHHHHH-HcCCCEE
Confidence 9999999999999999999999999999999999888889999 6565443
No 29
>2geb_A Hypoxanthine-guanine phosphoribosyltransferase; HGPRT, mutant, inhibitor design, selectivity; 1.70A {Thermoanaerobacter tengcongensis}
Probab=99.71 E-value=3.7e-17 Score=137.96 Aligned_cols=122 Identities=16% Similarity=0.219 Sum_probs=93.2
Q ss_pred echhhccCHHHHHHHHHHHHHHhcc---CCccEEEecCCcchhHHHHHHHHhCCCe--EEeeccCCCCCceeeeeeeecc
Q 025851 100 DITTLLLDTKAFRDTIDLFVERYKD---KNISVVAGIEARGFIFGPPIALAIGAKF--VPMRKPKKLPGEVISEEYSLEY 174 (247)
Q Consensus 100 Di~~ll~dp~~~~~l~~~La~~~~~---~~iDvVVgve~rGf~lA~~LA~~Lg~p~--v~iRK~~kl~~~~~s~~y~~e~ 174 (247)
|++.++.+++.+...+..|++.+.. .++|+|++++.||+++|..+|+.+++|+ ..+++.....+ + .
T Consensus 11 ~~~~~l~~~~~i~~~~~~La~~i~~~~~~~~~vvv~i~~gG~~~a~~la~~l~~p~~~~~i~~~~y~~~-~--------~ 81 (185)
T 2geb_A 11 DIEEILITEEQLKAKVKELGEMITRDYEGKDLVLIGVLKGAIMFMSGLSRAIDLPLSIDFLAVSSYGSS-T--------K 81 (185)
T ss_dssp GEEEEEECHHHHHHHHHHHHHHHHHHTTTSCEEEEEETTTTHHHHHHHHHTCCSCCEEEEEEEEECSTT-H--------H
T ss_pred ccceEEeCHHHHHHHHHHHHHHHHHHcCCCCCEEEEECcCcHHHHHHHHHHcCCCceeEEEEEEecCCC-C--------c
Confidence 4566889999999999999887763 2589999999999999999999999986 33332111000 0 0
Q ss_pred ccceeEEee--cccCCCCEEEEEecchhhhHHHHHHHHHHHhCCCeEEEEEEEEeccC
Q 025851 175 GKDVMEMHV--GAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPE 230 (247)
Q Consensus 175 g~~~~~l~~--~~~~~GkrVLIVDDIltTG~Tl~aa~~lLk~aGa~vV~v~vlv~~~~ 230 (247)
.++.+++.. ....+|++||||||+++||+|+.+++++|+++|++.+.++++++++.
T Consensus 82 ~~~~~~~~~~~~~~~~gk~VllVDDvi~TG~Tl~~a~~~L~~~Ga~~V~~~~l~~~~~ 139 (185)
T 2geb_A 82 SSGIVKIIKDHDIDIEGKDVLIVEDIIDSGLTLAYLRETLLGRKPRSLKICTILDKPE 139 (185)
T ss_dssp HHCCEEEEECCCSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGG
T ss_pred cCccEEEeccCCCCCCCCEEEEECCccCCHHHHHHHHHHHHhcCCCEEEEEEEEECCC
Confidence 011222221 22468999999999999999999999999999999999999999874
No 30
>1pzm_A HGPRT, hypoxanthine-guanine phosphoribosyltransferase; HET: 5GP; 2.10A {Leishmania tarentolae} SCOP: c.61.1.1
Probab=99.71 E-value=4.2e-17 Score=140.80 Aligned_cols=124 Identities=14% Similarity=0.170 Sum_probs=93.0
Q ss_pred EEechhhccCHHHHHHHHHHHHHHhcc---------CCccEEEecCCcchhHHHHHHHHh---CCCe--EEeeccCCCCC
Q 025851 98 FQDITTLLLDTKAFRDTIDLFVERYKD---------KNISVVAGIEARGFIFGPPIALAI---GAKF--VPMRKPKKLPG 163 (247)
Q Consensus 98 f~Di~~ll~dp~~~~~l~~~La~~~~~---------~~iDvVVgve~rGf~lA~~LA~~L---g~p~--v~iRK~~kl~~ 163 (247)
+.|+..++.+++.+...+..|++.+.+ .+.++|+|++.|||++|..||+.+ ++|+ ..+++.....
T Consensus 20 ~~di~~~l~~~~~i~~~~~~La~~i~~~~~~~~~~~~~~~vvvgi~~gG~~~a~~la~~L~~~~~p~~~~~i~~~~y~~- 98 (211)
T 1pzm_A 20 YPMSARTLVTQEQVWAATAKCAKKIAADYKDFHLTADNPLYLLCVLKGSFIFTADLARFLADEGVPVKVEFICASSYGS- 98 (211)
T ss_dssp CTTEEEEEECHHHHHHHHHHHHHHHHHHHGGGTCBTTBCEEEEEETTTTHHHHHHHHHHHHHTTCCEEEEEEBCC-----
T ss_pred ccccceEEeCHHHHHHHHHHHHHHHHHhcccccccCCCCCEEEEEccchHHHHHHHHHHHhhcCCCceeeeEEeeeccC-
Confidence 348888899999999888888876642 357899999999999999999999 9994 3444221100
Q ss_pred ceeeeeeeeccccceeEEee--cccCCCCEEEEEecchhhhHHHHHHHHHHHhCCCeEEEEEEEEeccC
Q 025851 164 EVISEEYSLEYGKDVMEMHV--GAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPE 230 (247)
Q Consensus 164 ~~~s~~y~~e~g~~~~~l~~--~~~~~GkrVLIVDDIltTG~Tl~aa~~lLk~aGa~vV~v~vlv~~~~ 230 (247)
.+ + .++.+++.. ....+|++||||||+++||+|+.+++++|+++|++.+.++++++++.
T Consensus 99 ~~-------~-~~~~~~~~~~~~~~v~gk~VllVDDvi~TG~Tl~aa~~~L~~~Ga~~V~v~~l~~k~~ 159 (211)
T 1pzm_A 99 GV-------E-TSGQVRMLLDVRDSVENRHIMLVEDIVDSAITLQYLMRFMLAKKPASLKTVVLLDKPS 159 (211)
T ss_dssp -----------------CCBCCSSCCTTCEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGG
T ss_pred cc-------c-cCCceEEeccCCCCCCCCEEEEECCccccHHHHHHHHHHHHhcCCCEEEEEEEEecCc
Confidence 00 0 011111111 12368999999999999999999999999999999999999999874
No 31
>1tc1_A Protein (hypoxanthine phosphoribosyltransferase); transferase,phosphoribosyltransferase, purine salvage, nucleotide metabolism; HET: FMB MES; 1.41A {Trypanosoma cruzi} SCOP: c.61.1.1 PDB: 1tc2_A* 1p19_A* 1p18_A* 1p17_A* 1i0l_A* 1i14_A* 1i0i_A* 1i13_A*
Probab=99.68 E-value=2.5e-16 Score=136.98 Aligned_cols=122 Identities=16% Similarity=0.179 Sum_probs=92.0
Q ss_pred echhhccCHHHHHHHHHHHHHHhcc---CCc-------cEEEecCCcchhHHHHHHHHh---CCCe--EEeeccCCCCCc
Q 025851 100 DITTLLLDTKAFRDTIDLFVERYKD---KNI-------SVVAGIEARGFIFGPPIALAI---GAKF--VPMRKPKKLPGE 164 (247)
Q Consensus 100 Di~~ll~dp~~~~~l~~~La~~~~~---~~i-------DvVVgve~rGf~lA~~LA~~L---g~p~--v~iRK~~kl~~~ 164 (247)
|+..++.+++.+...++.|++.+.. .+. ++|+|++.|||++|..||+.+ ++|+ ..++...... .
T Consensus 6 di~~~li~~~~i~~~~~~La~~I~~~~~~~~~~~~~p~~vVv~v~~gG~~~a~~La~~L~~~~~p~~~~~l~~~~y~~-~ 84 (220)
T 1tc1_A 6 FAEKILFTEEEIRTRIKEVAKRIADDYKGKGLRPYVNPLVLISVLKGSFMFTADLCRALCDFNVPVRMEFICVSSYGE-G 84 (220)
T ss_dssp TSCCEEECHHHHHHHHHHHHHHHHHHHTTSCCBTTTBCEEEEEETTTTHHHHHHHHHHHHHTTCCEEEEEEEEECC----
T ss_pred ccccEeeCHHHHHHHHHHHHHHHHHHccCcccccCCCCeEEEEeccCCHHHHHHHHHHHHhcCCCccccEEEEeecCC-C
Confidence 6778899999999999988877652 123 899999999999999999999 9994 3343211100 0
Q ss_pred eeeeeeeeccccceeEEee--cccCCCCEEEEEecchhhhHHHHHHHHHHHhCCCeEEEEEEEEeccC
Q 025851 165 VISEEYSLEYGKDVMEMHV--GAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPE 230 (247)
Q Consensus 165 ~~s~~y~~e~g~~~~~l~~--~~~~~GkrVLIVDDIltTG~Tl~aa~~lLk~aGa~vV~v~vlv~~~~ 230 (247)
+. .++.+.+.. ....+|++|||||||++||+|+.+++++|+++|++.|.++++++++.
T Consensus 85 ~~--------~~~~v~~~~~~~~~v~Gk~VLLVDDii~TG~Tl~~a~~~L~~~Ga~~V~v~~l~~k~~ 144 (220)
T 1tc1_A 85 LT--------SSGQVRMLLDTRHSIEGHHVLIVEDIVDTALTLNYLYHMYFTRRPASLKTVVLLDKRE 144 (220)
T ss_dssp --------------CEEEECCSSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECTT
T ss_pred cc--------cCCcEEEecCCCccCCCCEEEEEeCccCcHHHHHHHHHHHHhcCCCEEEEEEEEECCc
Confidence 00 011122221 22368999999999999999999999999999999999999999874
No 32
>1a3c_A PYRR, pyrimidine operon regulatory protein PYRR; transcription regulation, attenuation protein, RNA-binding P pyrimidine biosynthesis; 1.60A {Bacillus subtilis} SCOP: c.61.1.1 PDB: 1a4x_A 2igb_A* 1xz8_A* 1non_A 1xzn_A*
Probab=99.68 E-value=1e-16 Score=134.05 Aligned_cols=126 Identities=18% Similarity=0.243 Sum_probs=87.3
Q ss_pred echhhccCHHHHHHHHHHHHHHhcc----CCccEEEecCCcchhHHHHHHHHhC----CC--eEEeeccCCC-CCceeee
Q 025851 100 DITTLLLDTKAFRDTIDLFVERYKD----KNISVVAGIEARGFIFGPPIALAIG----AK--FVPMRKPKKL-PGEVISE 168 (247)
Q Consensus 100 Di~~ll~dp~~~~~l~~~La~~~~~----~~iDvVVgve~rGf~lA~~LA~~Lg----~p--~v~iRK~~kl-~~~~~s~ 168 (247)
|...++.+++.+..++..|++.+.. .++|+|++++.|||++|..||+.++ +| +..+++.... .......
T Consensus 2 ~~~~~l~~~~~i~~~~~~la~~i~~~~~~~~~~~iv~i~~~G~~~a~~la~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~ 81 (181)
T 1a3c_A 2 NQKAVILDEQAIRRALTRIAHEMIERNKGMNNCILVGIKTRGIYLAKRLAERIEQIEGNPVTVGEIDITLYRDDLSKKTS 81 (181)
T ss_dssp -CEEEEECHHHHHHHHHHHHHHHHHHCC----CEEEEESHHHHHHHHHHHHHHHHHHSSCCEEEEEEEECCC--------
T ss_pred CcccCccCHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEcCCCHHHHHHHHHHHhHHhCCCcccCeEEEEEecCcccccCc
Confidence 3455788999999999889887754 2689999999999999999999998 43 3333322111 1000000
Q ss_pred eeeeccccceeEEeecccCCCCEEEEEecchhhhHHHHHHHHHHHhCC-CeEEEEEEEEecc
Q 025851 169 EYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVG-VHVVECACVIELP 229 (247)
Q Consensus 169 ~y~~e~g~~~~~l~~~~~~~GkrVLIVDDIltTG~Tl~aa~~lLk~aG-a~vV~v~vlv~~~ 229 (247)
.. ......+.+ ....+|++|||||||+|||+|+.+++++|+++| ++.+.++++++++
T Consensus 82 ~~--~~~~~~~~~--~~~~~gk~VllVDDvitTG~Tl~~a~~~L~~~G~a~~V~~~~l~~k~ 139 (181)
T 1a3c_A 82 ND--EPLVKGADI--PVDITDQKVILVDDVLYTGRTVRAGMDALVDVGRPSSIQLAVLVDRG 139 (181)
T ss_dssp CC--CCEEEEEEC--SSCCTTSEEEEEEEEESSSHHHHHHHHHHHHHCCCSEEEEEEEEECC
T ss_pred cc--eeeeccccc--CcCCCCCEEEEEeCccCcHHHHHHHHHHHHhcCCCcEEEEEEEEccC
Confidence 00 000011111 123689999999999999999999999999997 9999999999876
No 33
>1yfz_A Hypoxanthine-guanine phosphoribosyltransferase; protein-nucleotide complex; HET: IMP; 2.20A {Thermoanaerobacter tengcongensis} SCOP: c.61.1.1 PDB: 1r3u_A*
Probab=99.68 E-value=8.7e-17 Score=137.70 Aligned_cols=121 Identities=17% Similarity=0.255 Sum_probs=92.4
Q ss_pred echhhccCHHHHHHHHHHHHHHhcc---CCccEEEecCCcchhHHHHHHHHhCCCe--EEeeccCCCCCceeeeeeeecc
Q 025851 100 DITTLLLDTKAFRDTIDLFVERYKD---KNISVVAGIEARGFIFGPPIALAIGAKF--VPMRKPKKLPGEVISEEYSLEY 174 (247)
Q Consensus 100 Di~~ll~dp~~~~~l~~~La~~~~~---~~iDvVVgve~rGf~lA~~LA~~Lg~p~--v~iRK~~kl~~~~~s~~y~~e~ 174 (247)
|+..++.+++.+...+..|++.+.. .++|+|++++.||+++|..+|+.+++|+ ..+++.. |..+.
T Consensus 31 ~~~~~l~~~~~i~~~~~~La~~i~~~~~~~~~viv~v~~gG~~~a~~la~~l~~p~~~~~~~~~~----------y~~~~ 100 (205)
T 1yfz_A 31 DIEEILITEEQLKAKVKELGEMITRDYEGKDLVLIGVLKGAIMFMSGLSRAIDLPLSIDFLAVSS----------YGSST 100 (205)
T ss_dssp SEEEEEECHHHHHHHHHHHHHHHHHHTTTSCEEEEEETTTHHHHHHHHHHTCCSCCEEEEEEEEE----------CSHHH
T ss_pred ccceEEcCHHHHHHHHHHHHHHHHHHcCCCCCEEEEECcCCHHHHHHHHHHhCCCceeEEEEEEe----------ccCCc
Confidence 3455788999999888888887753 2589999999999999999999999986 2333211 11000
Q ss_pred -ccceeEEee--cccCCCCEEEEEecchhhhHHHHHHHHHHHhCCCeEEEEEEEEeccC
Q 025851 175 -GKDVMEMHV--GAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPE 230 (247)
Q Consensus 175 -g~~~~~l~~--~~~~~GkrVLIVDDIltTG~Tl~aa~~lLk~aGa~vV~v~vlv~~~~ 230 (247)
.++.+++.. ....+|++||||||++|||+|+.+++++|+++|++.|.++++++++.
T Consensus 101 ~~~~~~~~~~~~~~~~~gk~VllVDDvi~TG~Tl~~a~~~L~~~Ga~~V~~~~l~~~~~ 159 (205)
T 1yfz_A 101 KSSGIVKIIKDHDIDIEGKDVLIVEDIIDSGLTLAYLRETLLGRKPRSLKICTILDKPE 159 (205)
T ss_dssp HHHCCEEEEECCCSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGG
T ss_pred cccceEEEeccCCCCCCcCEEEEECCccCcHHHHHHHHHHHHhcCCCEEEEEEEEecCc
Confidence 011222221 22468999999999999999999999999999999999999999873
No 34
>1nul_A XPRT, xanthine-guanine phosphoribosyltransferase; purine salvage enzym; 1.80A {Escherichia coli} SCOP: c.61.1.1 PDB: 1a96_A* 1a95_A 1a98_A 1a97_A*
Probab=99.67 E-value=1.5e-16 Score=130.45 Aligned_cols=110 Identities=17% Similarity=0.276 Sum_probs=85.8
Q ss_pred hccCHHHHHHHHHHHHHHhcc-CCccEEEecCCcchhHHHHHHHHhCCC-eEEeeccCCCCCceeeeeeeeccccceeEE
Q 025851 104 LLLDTKAFRDTIDLFVERYKD-KNISVVAGIEARGFIFGPPIALAIGAK-FVPMRKPKKLPGEVISEEYSLEYGKDVMEM 181 (247)
Q Consensus 104 ll~dp~~~~~l~~~La~~~~~-~~iDvVVgve~rGf~lA~~LA~~Lg~p-~v~iRK~~kl~~~~~s~~y~~e~g~~~~~l 181 (247)
++.+++.++..+..|++++.. .+.|+|+|++.||+.+|..||+.|++| +..++... |.. ++.+.+.+
T Consensus 5 ~l~~~~~i~~~~~~La~~i~~~~~~~~vvgi~~Gg~~~a~~la~~l~~~~~~~i~~~~----------y~~-~~~~~~~~ 73 (152)
T 1nul_A 5 YIVTWDMLQIHARKLASRLMPSEQWKGIIAVSRGGLVPGALLARELGIRHVDTVCISS----------YDH-DNQRELKV 73 (152)
T ss_dssp EECCHHHHHHHHHHHHHHHCSGGGCSEEEEEETTTHHHHHHHHHHHTCCCEEEEEEEC-------------------CEE
T ss_pred EecCHHHHHHHHHHHHHHHHHHcCCCEEEEEcCCCHHHHHHHHHHcCCCcceEEEEEE----------ecC-cccceEEE
Confidence 578899999999999998875 457899999999999999999999999 55554221 110 11222333
Q ss_pred eecccCCCCEEEEEecchhhhHHHHHHHHHHHhCCCeEEEEEEEEecc
Q 025851 182 HVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELP 229 (247)
Q Consensus 182 ~~~~~~~GkrVLIVDDIltTG~Tl~aa~~lLk~aGa~vV~v~vlv~~~ 229 (247)
..+...+|++||||||+++||+|+.++++.|++ +.++++++++
T Consensus 74 ~~~~~~~gk~VliVDDii~TG~Tl~~a~~~l~~-----v~~a~L~~k~ 116 (152)
T 1nul_A 74 LKRAEGDGEGFIVIDDLVDTGGTAVAIREMYPK-----AHFVTIFAKP 116 (152)
T ss_dssp EECCSSCCTTEEEEEEEECTTSSHHHHHHHCTT-----SEEEEEEECG
T ss_pred ecCCCCCcCEEEEEEeecCchHHHHHHHHHHhh-----CCEEEEEECC
Confidence 333346899999999999999999999999987 7889999986
No 35
>2ywu_A Hypoxanthine-guanine phosphoribosyltransferase; rossmann fold, structural genomics, NPPSFA; HET: IMP; 1.89A {Thermus thermophilus} PDB: 2ywt_A* 2yws_A* 3acb_A 3acc_A* 3acd_A*
Probab=99.64 E-value=1.4e-15 Score=128.47 Aligned_cols=117 Identities=19% Similarity=0.238 Sum_probs=88.5
Q ss_pred hccCHHHHHHHHHHHHHHhcc---CCccEEEecCCcchhHHHHHHHHhCCCeE--EeeccCCCCCceeeeeeeec-cccc
Q 025851 104 LLLDTKAFRDTIDLFVERYKD---KNISVVAGIEARGFIFGPPIALAIGAKFV--PMRKPKKLPGEVISEEYSLE-YGKD 177 (247)
Q Consensus 104 ll~dp~~~~~l~~~La~~~~~---~~iDvVVgve~rGf~lA~~LA~~Lg~p~v--~iRK~~kl~~~~~s~~y~~e-~g~~ 177 (247)
++.+++.++..++.|++++.+ .+.++|||++.+|+.+|..+|+.+++|+. .++... |..+ ...+
T Consensus 12 ~li~~~~i~~~i~~La~~I~~~~~~~~~vvVgi~~gg~~~a~~la~~L~~p~~~~~i~~~~----------y~~~~~~~~ 81 (181)
T 2ywu_A 12 VQISAEAIKKRVEELGGEIARDYQGKTPHLICVLNGAFIFMADLVRAIPLPLTMDFIAISS----------YGNAFKSSG 81 (181)
T ss_dssp CCBCHHHHHHHHHHHHHHHHHHTTTCCCEEEEEETTTHHHHHHHHTTCCSCCEEEEEEEC--------------------
T ss_pred EEECHHHHHHHHHHHHHHHHHHcCCCCCEEEEECchhHHHHHHHHHHcCCCceEEEEEEEE----------ecCCccccC
Confidence 578888888888888887754 25799999999999999999999999863 333211 1000 0111
Q ss_pred eeEEee--cccCCCCEEEEEecchhhhHHHHHHHHHHHhCCCeEEEEEEEEeccC
Q 025851 178 VMEMHV--GAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPE 230 (247)
Q Consensus 178 ~~~l~~--~~~~~GkrVLIVDDIltTG~Tl~aa~~lLk~aGa~vV~v~vlv~~~~ 230 (247)
.+++.. ....+|++||||||+++||+|+.++++.|++.|++.+.++++++++.
T Consensus 82 ~v~i~~~~~~~~~gk~vliVDDii~TG~Tl~~~~~~l~~~g~~~v~~~~l~~k~~ 136 (181)
T 2ywu_A 82 EVELLKDLRLPIHGRDVIVVEDIVDTGLTLSYLLDYLEARKPASVRVAALLSKPS 136 (181)
T ss_dssp --CEEECCCSCCTTCEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEECGG
T ss_pred cEEEEecCCCCCCCCEEEEECCeeCChHHHHHHHHHHHhcCCcEEEEEEEEECCC
Confidence 222221 23468999999999999999999999999999999999999999863
No 36
>1u9y_A RPPK;, ribose-phosphate pyrophosphokinase; PRPP synthase, transferase; 2.65A {Methanocaldococcus jannaschii} SCOP: c.61.1.2 c.61.1.2 PDB: 1u9z_A*
Probab=99.63 E-value=4.5e-16 Score=140.13 Aligned_cols=118 Identities=21% Similarity=0.293 Sum_probs=88.9
Q ss_pred HHHHHHHhcc-CCccEEEecCCcchhHHHHHHHHhCCCeEEeeccCCCCCceeeeeeeeccccceeEEeecccCCCCEEE
Q 025851 115 IDLFVERYKD-KNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERAL 193 (247)
Q Consensus 115 ~~~La~~~~~-~~iDvVVgve~rGf~lA~~LA~~Lg~p~v~iRK~~kl~~~~~s~~y~~e~g~~~~~l~~~~~~~GkrVL 193 (247)
+..|++++.+ .+.++|++++.||+.+|..+|+.+|+|+.+++|.++.++ ...+.+. +...+|++||
T Consensus 143 ~~~La~~i~~~~~~~vVv~pd~Gg~~~a~~la~~l~~p~~~i~k~r~~~~------------~~~~~l~-g~~v~Gk~Vl 209 (284)
T 1u9y_A 143 VPKLAEYVKDKLNDPIVLAPDKGALEFAKTASKILNAEYDYLEKTRLSPT------------EIQIAPK-TLDAKDRDVF 209 (284)
T ss_dssp HHHHHHHHTTTCSSCEEEESSGGGHHHHHHHHHHHTCCEEEBC----------------------CCBS-SCCCTTCCEE
T ss_pred HHHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHhCCCEEEEEEEEcCCC------------eEEEEec-CccCCCCEEE
Confidence 3445555443 357899999999999999999999999998877654221 0112221 2246899999
Q ss_pred EEecchhhhHHHHHHHHHHHhCCCeEEEEEEEEeccCcccccccCCCCcccc
Q 025851 194 IVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVL 245 (247)
Q Consensus 194 IVDDIltTG~Tl~aa~~lLk~aGa~vV~v~vlv~~~~~~grekL~~~pv~sL 245 (247)
||||+++||+|+.++++.|+++|++.+.++++++....++.++|.+.++..+
T Consensus 210 IVDDii~TG~Tl~~aa~~Lk~~Ga~~V~~~~~h~v~s~~a~~~l~~~~i~~v 261 (284)
T 1u9y_A 210 IVDDIISTGGTMATAVKLLKEQGAKKIIAACVHPVLIGDALNKLYSAGVEEV 261 (284)
T ss_dssp EEEEECSSSHHHHHHHHHHHHTTCCSEEEEEEECCCCTTHHHHHHHHTCSEE
T ss_pred EEecccCchHHHHHHHHHHHHCCCcEEEEEEEeEecCcHHHHHHHhCCCCEE
Confidence 9999999999999999999999999999999999887788888876555443
No 37
>3s5j_B Ribose-phosphate pyrophosphokinase 1; nucleotide synthesis, transferase; 2.02A {Homo sapiens} PDB: 2hcr_A* 3efh_A 2h06_A 2h07_A 2h08_A
Probab=99.62 E-value=1.1e-15 Score=140.28 Aligned_cols=116 Identities=20% Similarity=0.153 Sum_probs=88.4
Q ss_pred HHHHHHHhccCCccEEEecCCcchhHHHHHHHHhCCCeEEeeccCCCCCceeeeeeeeccccceeEEeecccCCCCEEEE
Q 025851 115 IDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALI 194 (247)
Q Consensus 115 ~~~La~~~~~~~iDvVVgve~rGf~lA~~LA~~Lg~p~v~iRK~~kl~~~~~s~~y~~e~g~~~~~l~~~~~~~GkrVLI 194 (247)
++++.+.+.+.+.++||+++.||+.+|..+|+.||+|+.+++|+++.++... ...+ ....+|++|+|
T Consensus 152 ~~~i~~~~~~~~~~vVVspd~Ggv~~A~~lA~~L~~~~~~i~K~r~~~~~v~-----------~~~l--~g~v~gk~viI 218 (326)
T 3s5j_B 152 LKWIRENISEWRNCTIVSPDAGGAKRVTSIADRLNVDFALIHKERKKANEVD-----------RMVL--VGDVKDRVAIL 218 (326)
T ss_dssp HHHHHHHCTTGGGCEEEESSGGGHHHHHHHHHHHTCEEEEEEEC-------C-----------CEEE--ESCCTTSEEEE
T ss_pred HHHHHHhcCcCCCcEEEEECCCchHHHHHHHHHcCCCEEEEEEEecCCCeee-----------EEec--cccCCCCEEEE
Confidence 3444444433346799999999999999999999999999988765433210 1111 22368999999
Q ss_pred EecchhhhHHHHHHHHHHHhCCCeEEEEEEEEeccCcccccccCCCCcc
Q 025851 195 VDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLF 243 (247)
Q Consensus 195 VDDIltTG~Tl~aa~~lLk~aGa~vV~v~vlv~~~~~~grekL~~~pv~ 243 (247)
|||+++||+|+.++++.|++.|++.+.+++.++....++.++|++.++.
T Consensus 219 VDDii~TG~Tl~~a~~~L~~~Ga~~v~~~~tH~v~~~~a~e~l~~~~i~ 267 (326)
T 3s5j_B 219 VDDMADTCGTICHAADKLLSAGATRVYAILTHGIFSGPAISRINNACFE 267 (326)
T ss_dssp EEEEESSCHHHHHHHHHHHHTTCSEEEEEEEEECCCTTHHHHHHHSCCS
T ss_pred EccccCCcHHHHHHHHHHHHcCCCEEEEEEEecccCchHHHHHhhCCCC
Confidence 9999999999999999999999999999999998777788888754443
No 38
>3ohp_A Hypoxanthine phosphoribosyltransferase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Vibrio cholerae} SCOP: c.61.1.1 PDB: 1g9s_A* 1g9t_A* 1grv_A 1j7j_A
Probab=99.62 E-value=3.9e-15 Score=125.42 Aligned_cols=118 Identities=15% Similarity=0.231 Sum_probs=88.5
Q ss_pred hhccCHHHHHHHHHHHHHHhcc-C--Cc-cEEEecCCcchhHHHHHHHHhCCCe--EEeeccCCCCCceeeeeeeecccc
Q 025851 103 TLLLDTKAFRDTIDLFVERYKD-K--NI-SVVAGIEARGFIFGPPIALAIGAKF--VPMRKPKKLPGEVISEEYSLEYGK 176 (247)
Q Consensus 103 ~ll~dp~~~~~l~~~La~~~~~-~--~i-DvVVgve~rGf~lA~~LA~~Lg~p~--v~iRK~~kl~~~~~s~~y~~e~g~ 176 (247)
.++.+++.++..+..|++++.+ . +. ++|+|++.+|+.+|..+|+.|++|+ ..+++.....+ + +..
T Consensus 6 ~~l~s~~~i~~~i~~La~~I~~~~~~~~~~vvVgi~~gG~~~a~~la~~L~~~~~~~~i~~~~y~~~-~--------~~~ 76 (177)
T 3ohp_A 6 EVMISEQEVAQRIRELGQQITEHYQGSSDLVLVGLLRGSFVFMADLARQIHLTHQVDFMTASSYGNS-M--------QSS 76 (177)
T ss_dssp EEEECHHHHHHHHHHHHHHHHHHTTTCSCEEEEEETTTTHHHHHHHHHTCCSCCEEEEEEECC-----------------
T ss_pred EEeeCHHHHHHHHHHHHHHHHHHcCCCCCeEEEEECcchHHHHHHHHHHcCCCceEEEEEEEEEcCC-C--------ccC
Confidence 4678888888888888887654 1 24 8999999999999999999999985 33442211000 0 011
Q ss_pred ceeEEeec--ccCCCCEEEEEecchhhhHHHHHHHHHHHhCCCeEEEEEEEEecc
Q 025851 177 DVMEMHVG--AVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELP 229 (247)
Q Consensus 177 ~~~~l~~~--~~~~GkrVLIVDDIltTG~Tl~aa~~lLk~aGa~vV~v~vlv~~~ 229 (247)
+.+++... ...+|++||||||+++||+|+.++++.|++.|++.+.++++++++
T Consensus 77 ~~v~i~~~~~~~~~gk~vliVDDii~TG~Tl~~~~~~l~~~g~~~v~~~~l~~~~ 131 (177)
T 3ohp_A 77 RDVRILKDLDDDIKGKDVLLVEDIIDTGNTLNKVKEILALREPKSIRICTLLDKP 131 (177)
T ss_dssp CCCCEEECCSSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECG
T ss_pred CcEEEecCCCcccCCCEEEEEeeEeCcHHHHHHHHHHHHhcCCcEEEEEEEEECC
Confidence 12222222 236899999999999999999999999999999999999999987
No 39
>2ji4_A Phosphoribosyl pyrophosphate synthetase-associated protein 2; phosphorylation, nucleotide biosynthesis, transferase; 2.55A {Homo sapiens} PDB: 2c4k_A*
Probab=99.61 E-value=1.1e-15 Score=142.78 Aligned_cols=127 Identities=14% Similarity=0.121 Sum_probs=85.4
Q ss_pred HHHHHHHhccCCccEEEecCCcchhHHHHHHHHhCCCeEEeeccCCCC----------Cceeeeeeeeccccc------e
Q 025851 115 IDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLP----------GEVISEEYSLEYGKD------V 178 (247)
Q Consensus 115 ~~~La~~~~~~~iDvVVgve~rGf~lA~~LA~~Lg~p~v~iRK~~kl~----------~~~~s~~y~~e~g~~------~ 178 (247)
++.+.+.+.+.+.++||+++.||+.+|..+|+.|++|+.+++|+++.. .+.+...+..+++.. .
T Consensus 180 a~~I~~~~~~~~~~vVV~pd~GGv~~A~~lA~~L~~pl~ii~k~r~~~~~e~~~gr~~~~~v~~~~~~~~g~~i~~~~~~ 259 (379)
T 2ji4_A 180 LQYIQEEIPDYRNAVIVAKSPASAKRAQSFAERLRLGIAVIHGEAQDAESDLVDGRHSPPMVRSVAAIHPSLEIPMLIPK 259 (379)
T ss_dssp HHHHHHHSTTGGGEEEEESSGGGHHHHHHHHHHTTCEEEEEC--------------------------------------
T ss_pred HHHHHHhcccCCCcEEEEEccchHHHHHHHHHHhCCCEEEEEEEeecccccccccccCCcccccccccccccchhhhhhh
Confidence 344444433335689999999999999999999999999887655311 011111111111111 0
Q ss_pred --eEEeecccCCCCEEEEEecchhhhHHHHHHHHHHHhCCCeEEEEEEEEeccCcccccccCCCC
Q 025851 179 --MEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKP 241 (247)
Q Consensus 179 --~~l~~~~~~~GkrVLIVDDIltTG~Tl~aa~~lLk~aGa~vV~v~vlv~~~~~~grekL~~~p 241 (247)
..+......+|++||||||+++||+|+.++++.|++.|++.+.+++.++....++.++|++.+
T Consensus 260 ~~~~~~l~g~v~Gk~viiVDDii~TG~Tl~~a~~~L~~~Ga~~v~~~~tH~v~s~~a~~~l~~s~ 324 (379)
T 2ji4_A 260 EKPPITVVGDVGGRIAIIVDDIIDDVDSFLAAAETLKERGAYKIFVMATHGLLSSDAPRRIEESA 324 (379)
T ss_dssp ---CCCEESCCTTSEEEEEEEEECSCHHHHHHHHHHHHTTCCEEEEEEEEECCCTTHHHHHHHSS
T ss_pred cccccccccCCCCCEEEEEecCCCchHHHHHHHHHHHhcCCCEEEEEEEeecCCcHHHHHHHhCC
Confidence 011111247999999999999999999999999999999999999999987778888886433
No 40
>1ufr_A TT1027, PYR mRNA-binding attenuation protein; pyrimidine nucleotide biosynthesis, transcriptional attenuation, RNA-binding protein; 2.60A {Thermus thermophilus} SCOP: c.61.1.1
Probab=99.61 E-value=2e-15 Score=126.52 Aligned_cols=121 Identities=18% Similarity=0.206 Sum_probs=85.4
Q ss_pred hccCHHHHHHHHHHHHHHhcc----CCccEEEecCCcchhHHHHHHHHhC----CCeE--EeeccCCCCCceeeeeeeec
Q 025851 104 LLLDTKAFRDTIDLFVERYKD----KNISVVAGIEARGFIFGPPIALAIG----AKFV--PMRKPKKLPGEVISEEYSLE 173 (247)
Q Consensus 104 ll~dp~~~~~l~~~La~~~~~----~~iDvVVgve~rGf~lA~~LA~~Lg----~p~v--~iRK~~kl~~~~~s~~y~~e 173 (247)
++.+++.+...+..|+..+.. .+.++|++++.|||++|..||+.++ +|+. .+++..... ... .+...
T Consensus 6 ~l~~~~~i~~~~~~La~~i~~~~~~~~~~~iv~v~~rG~~~a~~la~~l~~~~~~~~~~~~l~~~~~~~-~~~--~~~~~ 82 (181)
T 1ufr_A 6 ELMNAPEMRRALYRIAHEIVEANKGTEGLALVGIHTRGIPLAHRIARFIAEFEGKEVPVGVLDITLYRD-DLT--EIGYR 82 (181)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHHHTSSTTEEEEEETTTHHHHHHHHHHHHHHHHCSCCCEEEEEEEC--------------
T ss_pred eecCHHHHHHHHHHHHHHHHHHcCCCCCeEEEEECCCChHHHHHHHHHHhHHhCCCcccCeEEEEEecC-ccc--ccccc
Confidence 567888888888888876643 2467999999999999999999987 7763 233211100 000 00000
Q ss_pred cccceeEEeecccCCCCEEEEEecchhhhHHHHHHHHHHHhCC-CeEEEEEEEEecc
Q 025851 174 YGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVG-VHVVECACVIELP 229 (247)
Q Consensus 174 ~g~~~~~l~~~~~~~GkrVLIVDDIltTG~Tl~aa~~lLk~aG-a~vV~v~vlv~~~ 229 (247)
.....+.+ ....+|++|||||||+|||+|+.++++.|+++| ++.+.++++++++
T Consensus 83 ~~~~~~~~--~~~~~gk~VllVDDvitTG~Tl~~a~~~L~~~G~a~~V~~~~l~~~~ 137 (181)
T 1ufr_A 83 PQVRETRI--PFDLTGKAIVLVDDVLYTGRTARAALDALIDLGRPRRIYLAVLVDRG 137 (181)
T ss_dssp CEEEEEEE--CSCCTTCEEEEEEEEESSSHHHHHHHHHHHHHCCCSEEEEEEEEECC
T ss_pred ceeccccc--CcCCCCCEEEEEecCCCcHHHHHHHHHHHHhcCCCcEEEEEEEEcCC
Confidence 00011222 223589999999999999999999999999999 9999999999986
No 41
>1wd5_A Hypothetical protein TT1426; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; HET: MES; 2.00A {Thermus thermophilus} SCOP: c.61.1.1
Probab=99.60 E-value=3.9e-15 Score=127.56 Aligned_cols=110 Identities=26% Similarity=0.357 Sum_probs=76.3
Q ss_pred CccEEEecCCcchhHHHHHHHHhCCCeEE--eeccCCCCCceee-eeeeecccc-------------ceeE---------
Q 025851 126 NISVVAGIEARGFIFGPPIALAIGAKFVP--MRKPKKLPGEVIS-EEYSLEYGK-------------DVME--------- 180 (247)
Q Consensus 126 ~iDvVVgve~rGf~lA~~LA~~Lg~p~v~--iRK~~kl~~~~~s-~~y~~e~g~-------------~~~~--------- 180 (247)
+.|+|++++.||+++|..+|+.|++|+.. +||.++...+-.. ... .+.+. ..++
T Consensus 23 ~~~vVv~v~rGg~~~A~~la~~l~~p~~~~~~rk~~~~~~~e~~~ga~-s~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~ 101 (208)
T 1wd5_A 23 EAPVVLGLPRGGVVVADEVARRLGGELDVVLVRKVGAPGNPEFALGAV-GEGGELVLMPYALRYADQSYLEREAARQRDV 101 (208)
T ss_dssp CSCEEEECTTHHHHHHHHHHHHHTCEEEECCEEEEEETTEEEEEEEEE-ETTCCEEECTTHHHHSCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHhCCCeEEEEEEEecCCCCchhhccee-cCCCcEEechhhhcccCHHHHHHHHHHHHHH
Confidence 57899999999999999999999999876 4544321100000 000 00000 0000
Q ss_pred ----------EeecccCCCCEEEEEecchhhhHHHHHHHHHHHhCCCeEEEEEEEEeccCcccccccC
Q 025851 181 ----------MHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLG 238 (247)
Q Consensus 181 ----------l~~~~~~~GkrVLIVDDIltTG~Tl~aa~~lLk~aGa~vV~v~vlv~~~~~~grekL~ 238 (247)
.......+|++||||||++|||+|+.++++.|+++|++.|.+++.+..+ +++++|.
T Consensus 102 ~~~r~~~~~~~~~~~~~~gk~VllVDDvi~TG~Tl~~a~~~L~~~ga~~V~v~~~v~~~--~~~~~l~ 167 (208)
T 1wd5_A 102 LRKRAERYRRVRPKAARKGRDVVLVDDGVATGASMEAALSVVFQEGPRRVVVAVPVASP--EAVERLK 167 (208)
T ss_dssp HHHHHHHHHHHSCCCCCTTSEEEEECSCBSSCHHHHHHHHHHHTTCCSEEEEEEEEBCH--HHHHHHH
T ss_pred HHHHHHHhhccCCCCCCCCCEEEEECCCccHHHHHHHHHHHHHHcCCCEEEEEEEEcCH--HHHHHhc
Confidence 0011236899999999999999999999999999999999999988775 4555553
No 42
>2xbu_A Hypoxanthine-guanine phosphoribosyltransferase; glycosyltransferase, purine salvage, FLIP pepti; HET: 5GP; 1.80A {Saccharomyces cerevisiae} PDB: 2jkz_A* 2jky_A*
Probab=99.60 E-value=4.8e-15 Score=128.90 Aligned_cols=128 Identities=18% Similarity=0.180 Sum_probs=88.7
Q ss_pred hhhccCHHHHHHHHHHHHHHhccCCccEEEecCCcchhHHHHHHHHhCCC------eEEeeccCCCCCceeeeeeeeccc
Q 025851 102 TTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAK------FVPMRKPKKLPGEVISEEYSLEYG 175 (247)
Q Consensus 102 ~~ll~dp~~~~~l~~~La~~~~~~~iDvVVgve~rGf~lA~~LA~~Lg~p------~v~iRK~~kl~~~~~s~~y~~e~g 175 (247)
..++.+.+.++..+..|+..+.+.++|+|+|++.||+++|..||+.|++| +..++.............. ...+
T Consensus 5 ~~~~is~~~i~~~i~~LA~~I~~~~~~vIVgI~~GG~~~A~~La~~L~~~~~~~lpi~~i~~s~y~~~~~~~~~~-~~~g 83 (221)
T 2xbu_A 5 DKQYISYNNVHQLCQVSAERIKNFKPDLIIAIGGGGFIPARILRTFLKEPGVPTIRIFAIILSLYEDLNSVGSEV-EEVG 83 (221)
T ss_dssp CCEECCHHHHHHHHHHHHHHHTTTCCSEEEEEHHHHHHHHHHHHHHHCCTTSCCCEEEEEEEEEEC--------------
T ss_pred ceEecCHHHHHHHHHHHHHHhccCCCCEEEEECCCcHHHHHHHHHHhCCCCCCCccEEEEEEEEecCCccccccc-cccC
Confidence 34678888999999999999865678999999999999999999999983 3333211000000000000 0001
Q ss_pred cceeE---Ee---ecccCCCCEEEEEecchhhhHHHHHHHHHHHh--------CCC---------eEEEEEEEEeccC
Q 025851 176 KDVME---MH---VGAVQAGERALIVDDLVATGGTLSAAIRLLER--------VGV---------HVVECACVIELPE 230 (247)
Q Consensus 176 ~~~~~---l~---~~~~~~GkrVLIVDDIltTG~Tl~aa~~lLk~--------aGa---------~vV~v~vlv~~~~ 230 (247)
...+. +. .....+|++|||||||++||+|+.+++++|++ .|+ +.+.++++++++.
T Consensus 84 ~~~~~~~~~~~~~~~~~v~Gk~VLIVDDIidTG~Tl~aa~~~L~~~ga~~~~~~g~~~~~~~~~~~~v~iavL~~K~~ 161 (221)
T 2xbu_A 84 VKVSRTQWIDYEQCKLDLVGKNVLIVDEVDDTRTTLHYALSELEKDAAEQAKAKGIDTEKSPEMKTNFGIFVLHDKQK 161 (221)
T ss_dssp CEEEEEECCCHHHHTCCCTTCEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHTTCCTTTCGGGSCEEEEEEEEEECS
T ss_pred ceeeeeeeeecccccccCCCCEEEEEeccCCcHHHHHHHHHHHHhhcchhhhhcCccccccccCcceEEEEEEEeccc
Confidence 11110 11 02347999999999999999999999999997 786 5899999999873
No 43
>1w30_A PYRR bifunctional protein; transferase, glycosyltransferase, PSI, protein structure initiative, TB structural genomics consortium, TB; 1.9A {Mycobacterium tuberculosis} SCOP: c.61.1.1
Probab=99.58 E-value=6.8e-15 Score=126.02 Aligned_cols=123 Identities=17% Similarity=0.198 Sum_probs=86.7
Q ss_pred hhhccCHHHHHHHHHHHHHHhcc-----------CCccEEEecCCcchhHHHHHHHHh----CCCe--EEeeccCCCCCc
Q 025851 102 TTLLLDTKAFRDTIDLFVERYKD-----------KNISVVAGIEARGFIFGPPIALAI----GAKF--VPMRKPKKLPGE 164 (247)
Q Consensus 102 ~~ll~dp~~~~~l~~~La~~~~~-----------~~iDvVVgve~rGf~lA~~LA~~L----g~p~--v~iRK~~kl~~~ 164 (247)
..++.+++.++..+..|+..+.+ .+.++|+|++.|||++|..||+.| ++|+ ..+.........
T Consensus 13 ~~~l~~~~~i~~~i~~La~~i~~~~~~~~~~~~~~~~~vvvgi~~gG~~~a~~La~~L~~~~g~p~~~~~l~~~~y~~~~ 92 (201)
T 1w30_A 13 SRELMSAANVGRTISRIAHQIIEKTALDDPVGPDAPRVVLLGIPTRGVTLANRLAGNITEYSGIHVGHGALDITLYRDDL 92 (201)
T ss_dssp EEEEECHHHHHHHHHHHHHHHHHHTTTTSCCBTTBCCEEEEECTTHHHHHHHHHHHHHHHHHSCCCEEEECCCGGGCC--
T ss_pred ceEEeCHHHHHHHHHHHHHHHHHHccccccccccCCCcEEEEEcccHHHHHHHHHHHHhHHHCCCcccceEEEEEecCCc
Confidence 44788999999888888876643 256899999999999999999999 4664 222221100000
Q ss_pred eeeeeeeeccccceeEEeecccCCCCEEEEEecchhhhHHHHHHHHHHHhCC-CeEEEEEEEEecc
Q 025851 165 VISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVG-VHVVECACVIELP 229 (247)
Q Consensus 165 ~~s~~y~~e~g~~~~~l~~~~~~~GkrVLIVDDIltTG~Tl~aa~~lLk~aG-a~vV~v~vlv~~~ 229 (247)
..........+.+. ....+|++|||||||+|||+|+.+++++|+++| ++.+.++++++++
T Consensus 93 ----~~~~~~~~~~~~~~-~~~~~gk~VlLVDDVitTG~Tl~aa~~~L~~~G~a~~V~vavlv~k~ 153 (201)
T 1w30_A 93 ----MIKPPRPLASTSIP-AGGIDDALVILVDDVLYSGRSVRSALDALRDVGRPRAVQLAVLVDRG 153 (201)
T ss_dssp ----------CCCCCBCC-TTCSTTCEEEEEEEEESSSHHHHHHHHHHHHHCCCSEEEEEEEEECC
T ss_pred ----cccccceeecccCC-CccCCCCEEEEECCccchHHHHHHHHHHHHhCCCCcEEEEEEEEecC
Confidence 00000000011111 123689999999999999999999999999999 9999999999985
No 44
>3dah_A Ribose-phosphate pyrophosphokinase; pyrophosphoki seattle structural genomics center for infectious disease, magnesium, metal binding; HET: AMP; 2.30A {Burkholderia pseudomallei}
Probab=99.58 E-value=3.9e-15 Score=136.25 Aligned_cols=106 Identities=21% Similarity=0.278 Sum_probs=78.9
Q ss_pred CccEEEecCCcchhHHHHHHHHhCCCeEEeeccCCCCCceeeeeeeeccccceeEEeecccCCCCEEEEEecchhhhHHH
Q 025851 126 NISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTL 205 (247)
Q Consensus 126 ~iDvVVgve~rGf~lA~~LA~~Lg~p~v~iRK~~kl~~~~~s~~y~~e~g~~~~~l~~~~~~~GkrVLIVDDIltTG~Tl 205 (247)
+.++||+++.||+.+|..+|+.||+|+.+++|+++.++.. ..+.+. + ..+|++|+||||+++||+|+
T Consensus 166 ~~~vVVspd~Ggv~~A~~lA~~L~~p~~~i~K~r~~~~~v-----------~~~~i~-g-~v~gk~viiVDDii~TG~Tl 232 (319)
T 3dah_A 166 PDLLVVSPDVGGVVRARALAKQLNCDLAIIDKRRPKANVA-----------EVMNII-G-EVEGRTCVIMDDMVDTAGTL 232 (319)
T ss_dssp TTEEEECCSSTTHHHHHHHHHHTTCEEEC---------------------------------CCSEEEEEEEEESSCHHH
T ss_pred CCcEEEEeCCCccHHHHHHHHHhCCCEEEEEEEeccCCce-----------EEEEcc-c-cCCCCEEEEEecccCchHHH
Confidence 5679999999999999999999999999988776533211 011221 2 26899999999999999999
Q ss_pred HHHHHHHHhCCCeEEEEEEEEeccCcccccccCCCCccc
Q 025851 206 SAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFV 244 (247)
Q Consensus 206 ~aa~~lLk~aGa~vV~v~vlv~~~~~~grekL~~~pv~s 244 (247)
.++++.|++.|++.+.+++.++....++.++|++.++..
T Consensus 233 ~~a~~~L~~~Ga~~v~~~~tH~v~s~~a~~~l~~~~i~~ 271 (319)
T 3dah_A 233 CKAAQVLKERGAKQVFAYATHPVLSGGAADRIAASALDE 271 (319)
T ss_dssp HHHHHHHHHTTCSCEEEEEEEECCCTTHHHHHHTSSCSE
T ss_pred HHHHHHHHHcCCCEEEEEEEeecCChHHHHHHHhCCCCE
Confidence 999999999999999999999987778888887644443
No 45
>1dku_A Protein (phosphoribosyl pyrophosphate synthetase); open alpha-beta structure, domain duplication, phosphoribosyltransferase type I fold; HET: AP2 ABM; 2.20A {Bacillus subtilis} SCOP: c.61.1.2 c.61.1.2 PDB: 1dkr_A* 1ibs_A*
Probab=99.54 E-value=1.9e-14 Score=131.43 Aligned_cols=104 Identities=22% Similarity=0.330 Sum_probs=81.3
Q ss_pred CccEEEecCCcchhHHHHHHHHhCCCeEEeeccCCCCCceeeeeeeeccccceeEEeecccCCCCEEEEEecchhhhHHH
Q 025851 126 NISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTL 205 (247)
Q Consensus 126 ~iDvVVgve~rGf~lA~~LA~~Lg~p~v~iRK~~kl~~~~~s~~y~~e~g~~~~~l~~~~~~~GkrVLIVDDIltTG~Tl 205 (247)
+.++||+++.+|+.+|..+|+.+|+|+..++|.++.+. ....+.+. + ..+|++||||||++|||+|+
T Consensus 167 ~~~vVv~pd~Gg~~~A~~la~~L~~p~~~l~k~r~~~~-----------~~~~~~l~-~-~v~gk~VlLVDDiitTG~Tl 233 (317)
T 1dku_A 167 EDIVIVSPDHGGVTRARKLADRLKAPIAIIDKRRPRPN-----------VAEVMNIV-G-NIEGKTAILIDDIIDTAGTI 233 (317)
T ss_dssp CSEEEEESSGGGHHHHHHHHHHTTCCEEEEECC--------------------CEEE-S-CCTTCEEEEECSEESSCHHH
T ss_pred CCcEEEEeCcchHHHHHHHHHHhCCCEEEEEEEecccc-----------ceeEEEec-c-cCCCCEEEEEecccCCCHHH
Confidence 56799999999999999999999999988876553211 11123332 2 36899999999999999999
Q ss_pred HHHHHHHHhCCCeEEEEEEEEeccCcccccccCCCCc
Q 025851 206 SAAIRLLERVGVHVVECACVIELPELKGRERLGEKPL 242 (247)
Q Consensus 206 ~aa~~lLk~aGa~vV~v~vlv~~~~~~grekL~~~pv 242 (247)
.++++.|+++|++.|.+++.+.....++.++|++.++
T Consensus 234 ~~aa~~Lk~~Ga~~V~~~~tH~v~~~~a~~~l~~~~i 270 (317)
T 1dku_A 234 TLAANALVENGAKEVYACCTHPVLSGPAVERINNSTI 270 (317)
T ss_dssp HHHHHHHHHTTCSEEEEECSEECCCTTHHHHHHTSSE
T ss_pred HHHHHHHHHcCCcEEEEEEECcccChHHHHHHhhCCC
Confidence 9999999999999999999777776667778765443
No 46
>3acd_A Hypoxanthine-guanine phosphoribosyltransferase; rossmann fold, structural genomics, NPPSFA; HET: IMP; 1.89A {Thermus thermophilus} PDB: 3acc_A* 3acb_A*
Probab=99.46 E-value=4.7e-13 Score=113.23 Aligned_cols=118 Identities=19% Similarity=0.236 Sum_probs=87.4
Q ss_pred hhhccCHHHHHHHHHHHHHHhcc---CCccEEEecCCcchhHHHHHHHHhCCCeEE--eeccCCCCCceeeeeeeec-cc
Q 025851 102 TTLLLDTKAFRDTIDLFVERYKD---KNISVVAGIEARGFIFGPPIALAIGAKFVP--MRKPKKLPGEVISEEYSLE-YG 175 (247)
Q Consensus 102 ~~ll~dp~~~~~l~~~La~~~~~---~~iDvVVgve~rGf~lA~~LA~~Lg~p~v~--iRK~~kl~~~~~s~~y~~e-~g 175 (247)
..++.+.+.++..+..||.++.+ .+..+++|+..||++||..|++.++.|+.. +.- .+|... ..
T Consensus 10 ~~vlis~~~I~~~i~rlA~eI~e~~~~~~~vlvgIl~Gg~~fa~~L~~~l~~~~~~~~i~~----------ssy~~~~~~ 79 (181)
T 3acd_A 10 GPVQISAEAIKKRVEELGGEIARDYQGKTPHLICVLNGAFIFMADLVRAIPLPLTMDFIAI----------SSYGNAFKS 79 (181)
T ss_dssp SSCCBCHHHHHHHHHHHHHHHHHHTTTCCCEEEEEETTTHHHHHHHHTTCCSCCEEEEEEE----------C--------
T ss_pred ccEEeCHHHHHHHHHHHHHHHHHHhCCCCcEEEEEecCcHHHHHHHHHhcCCCccccceEE----------EEecCCcCC
Confidence 45778898888888888876643 245689999999999999999999988643 211 112111 11
Q ss_pred cceeEEee--cccCCCCEEEEEecchhhhHHHHHHHHHHHhCCCeEEEEEEEEecc
Q 025851 176 KDVMEMHV--GAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELP 229 (247)
Q Consensus 176 ~~~~~l~~--~~~~~GkrVLIVDDIltTG~Tl~aa~~lLk~aGa~vV~v~vlv~~~ 229 (247)
.+...+.. ....+|++|||||||+.||.|+.++.+.|++.|++.+.++++++++
T Consensus 80 ~g~~~~~~~~~~~i~gk~VllVDDIldTG~Tl~~~~~~l~~~~p~sv~~avLl~K~ 135 (181)
T 3acd_A 80 SGEVELLKDLRLPIHGRDVIVVEDIVDTGLTLSYLLDYLEARKPASVRVAALLSKP 135 (181)
T ss_dssp ----CEEECCCSCCTTCEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEECG
T ss_pred CCceEeccCCCcccCCCeeEEEEEEEcCchhHHHHHHHHhcCCCCEEEEEEEEEcC
Confidence 12222222 3346899999999999999999999999999999999999999986
No 47
>1ecf_A Glutamine phosphoribosylpyrophosphate amidotransf; purine biosynthesis, transferase, glycosyltransferase, gluta amidotransferase; HET: PIN; 2.00A {Escherichia coli} SCOP: c.61.1.1 d.153.1.1 PDB: 1ecb_A* 1ecc_A* 1ecg_A* 1ecj_A*
Probab=99.45 E-value=1.9e-13 Score=131.66 Aligned_cols=117 Identities=17% Similarity=0.171 Sum_probs=79.5
Q ss_pred HHHHHHHHHHHHHHhccCCccEEEecCCcchhHHHHHHHHhCCCeE--EeeccCCCCCceee--eeeeeccccceeEEee
Q 025851 108 TKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFV--PMRKPKKLPGEVIS--EEYSLEYGKDVMEMHV 183 (247)
Q Consensus 108 p~~~~~l~~~La~~~~~~~iDvVVgve~rGf~lA~~LA~~Lg~p~v--~iRK~~kl~~~~~s--~~y~~e~g~~~~~l~~ 183 (247)
.++.+.+++.+.+.+.+.++|+|++++.+|+.+|..+|+.+++|+. +++++.. ....+. +..+...-...+...
T Consensus 276 ~~lg~~La~~i~~~~~~~~~dvVv~vP~~g~~~A~~la~~lg~p~~~~~~k~r~~-~~t~i~~~~~~R~~~v~~~~~~~- 353 (504)
T 1ecf_A 276 VNMGTKLGEKIAREWEDLDIDVVIPIPETSCDIALEIARILGKPYRQGFVKNRYV-GRTFIMPGQQLRRKSVRRKLNAN- 353 (504)
T ss_dssp HHHHHHHHHHHHHHTTTCCCCEEEECTTTTHHHHHHHHHHHTCCBCCCEEECSCC-CCCCCCSSSCCCCCCSTTTEEEC-
T ss_pred HHHHHHHHHHHHHHcCCCCCeEEEEECCcHHHHHHHHHHHhCCCceeeEEEeccc-CCceeCccHHHHHHHHHhhhccc-
Confidence 3344444444444443345899999999999999999999999986 3342221 111111 010000111223322
Q ss_pred cccCCCCEEEEEecchhhhHHHHHHHHHHHhCCCeEEEEEEEE
Q 025851 184 GAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVI 226 (247)
Q Consensus 184 ~~~~~GkrVLIVDDIltTG~Tl~aa~~lLk~aGa~vV~v~vlv 226 (247)
....+||+||||||+++||+|+.+++++|+++||+.|.+++++
T Consensus 354 ~~~v~Gk~VllVDDii~TG~Tl~~~~~~L~~~Ga~~V~~~~l~ 396 (504)
T 1ecf_A 354 RAEFRDKNVLLVDDSIVRGTTSEQIIEMAREAGAKKVYLASAA 396 (504)
T ss_dssp GGGTTTCCEEEEESCCSSSHHHHHHHHHHHHTTCSSEEEEESS
T ss_pred cccCCCCeEEEEeccccccHHHHHHHHHHHhcCCcEEEEEEEe
Confidence 2346899999999999999999999999999999999988875
No 48
>1ao0_A Glutamine phosphoribosylpyrophosphate amidotransferase; glutamine amidotransferase, prtase, purine biosynthesis, phosphoribosyltransferase; HET: 5GP ADP; 2.80A {Bacillus subtilis} SCOP: c.61.1.1 d.153.1.1 PDB: 1gph_1*
Probab=99.34 E-value=1.7e-12 Score=123.47 Aligned_cols=115 Identities=17% Similarity=0.193 Sum_probs=80.0
Q ss_pred HHHHHHHHHHHHhccCCccEEEecCCcchhHHHHHHHHhCCCeEE-eeccCCCCCceeeee--eeeccccceeEEeeccc
Q 025851 110 AFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVP-MRKPKKLPGEVISEE--YSLEYGKDVMEMHVGAV 186 (247)
Q Consensus 110 ~~~~l~~~La~~~~~~~iDvVVgve~rGf~lA~~LA~~Lg~p~v~-iRK~~kl~~~~~s~~--y~~e~g~~~~~l~~~~~ 186 (247)
....+++.|++.+. .+.|+|+++|.+|..+|..+|+.+|+|+.. +.|.+....+.+..+ .+.......+.+. ...
T Consensus 258 ~r~~lg~~La~~~~-~~~DvVV~VP~~g~~~A~~la~~lg~p~~~~l~k~r~~~~~~~~~~~~~R~~~~~~~~~~~-~~~ 335 (459)
T 1ao0_A 258 ARKNLGKMLAQESA-VEADVVTGVPDSSISAAIGYAEATGIPYELGLIKNRYVGRTFIQPSQALREQGVRMKLSAV-RGV 335 (459)
T ss_dssp HHHHHHHHHHHHHC-CCCSEEECCTTTTHHHHHHHHHHHCCCBCCCEEECTTCCTTSCCCCHHHHHHTCCSSEEEC-HHH
T ss_pred HHHHHHHHHHHhcc-cCCcEEEEECCcHHHHHHHHHHHhCCCCceeEEEecCCCccccCCCHHHHHhhhhhhcccc-ccc
Confidence 44456677777664 368999999999999999999999999873 333222111111110 0001111223321 123
Q ss_pred CCCCEEEEEecchhhhHHHHHHHHHHHhCCCeEEEEEEEE
Q 025851 187 QAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVI 226 (247)
Q Consensus 187 ~~GkrVLIVDDIltTG~Tl~aa~~lLk~aGa~vV~v~vlv 226 (247)
.+||+||||||++|||+|+.+++++|+++||+.|.++++.
T Consensus 336 v~gk~VlLVDDvitTG~Tl~~a~~~L~~~Ga~~V~~~~l~ 375 (459)
T 1ao0_A 336 VEGKRVVMVDDSIVRGTTSRRIVTMLREAGATEVHVKISS 375 (459)
T ss_dssp HTTCEEEEEESCCSSSHHHHHHHHHHHHTTCSEEEEEESS
T ss_pred CCCCeEEEEeeeecCHHHHHHHHHHHHHcCCCEEEEEEec
Confidence 6899999999999999999999999999999999988853
No 49
>1dqn_A Guanine phosphoribosyltransferase; protein-inhibitor complex, Mg IONS, pyrophosphate, transition state analogue; HET: IMU; 1.75A {Giardia intestinalis} SCOP: c.61.1.1 PDB: 1dqp_A*
Probab=99.29 E-value=2.1e-12 Score=113.20 Aligned_cols=113 Identities=7% Similarity=0.161 Sum_probs=83.3
Q ss_pred chhhccCHHHHHHHHHHHHHHhcc---C--CccEEEecCCcchhHHHHHHHHhCCCeEE--eeccCCCCCceeeeeeeec
Q 025851 101 ITTLLLDTKAFRDTIDLFVERYKD---K--NISVVAGIEARGFIFGPPIALAIGAKFVP--MRKPKKLPGEVISEEYSLE 173 (247)
Q Consensus 101 i~~ll~dp~~~~~l~~~La~~~~~---~--~iDvVVgve~rGf~lA~~LA~~Lg~p~v~--iRK~~kl~~~~~s~~y~~e 173 (247)
...++.+++.+...+..|++++.+ . +.++|+|+..||+.+|..||+.|++|+.. ++.. +|..+
T Consensus 31 ~~~vlis~~~I~~~i~~LA~~I~~~~~~~~~~~vvVgi~~Gg~~~a~~La~~L~~p~~v~~i~vs----------~y~~~ 100 (230)
T 1dqn_A 31 KFHLLATFEECKALAADTARRMNEYYKDVAEPVTLVALLTGAYLYASLLTVHLTFPYTLHFVKVS----------SYKGT 100 (230)
T ss_dssp GCEEEECHHHHHHHHHHHHHHHHHHHTTCSSCEEEEEETTTHHHHHHHHHTTCCSCEEEEEECCE----------EEECS
T ss_pred cccEecCHHHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCCHHHHHHHHHHhCCCceEEEEEEE----------EeCCC
Confidence 344678888888888888877653 2 56799999999999999999999999743 2211 12111
Q ss_pred cccceeEE-ee--cccCCCCEEEEEecchhhhHHHHHHHHHHHhCCCeEEEEEEEEecc
Q 025851 174 YGKDVMEM-HV--GAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELP 229 (247)
Q Consensus 174 ~g~~~~~l-~~--~~~~~GkrVLIVDDIltTG~Tl~aa~~lLk~aGa~vV~v~vlv~~~ 229 (247)
...+ +.+ .. ....+||+|||||||++||.|+.++++.|++ +.++++++++
T Consensus 101 ~s~~-v~i~~~~l~~~v~Gk~VLIVDDIidTG~Tl~~a~~~L~~-----V~vavLl~k~ 153 (230)
T 1dqn_A 101 RQES-VVFDEEDLKQLKEKREVVLIDEYVDSGHTIFSIQEQIKH-----AKICSCFVKD 153 (230)
T ss_dssp SCEE-EECCHHHHHHHHHCSSEEEEEEEESSSHHHHHHHHHSTT-----CEEEEEEESC
T ss_pred ccCc-eEEEeccCccCCCCCEEEEEeeEcChHHHHHHHHHHhhc-----CEEEEEEECC
Confidence 1111 222 11 1236899999999999999999999999988 7888899886
No 50
>1i5e_A Uracil phosphoribosyltransferase; salvage pathway; HET: U5P; 3.00A {Bacillus caldolyticus} SCOP: c.61.1.1
Probab=99.03 E-value=1.2e-09 Score=94.08 Aligned_cols=100 Identities=25% Similarity=0.265 Sum_probs=71.7
Q ss_pred ccEEEecCCcchhHHHHHHHHh-CCCeEEeeccCCCCCceeeeeeeeccccce-eEEeecccCCCCEEEEEecchhhhHH
Q 025851 127 ISVVAGIEARGFIFGPPIALAI-GAKFVPMRKPKKLPGEVISEEYSLEYGKDV-MEMHVGAVQAGERALIVDDLVATGGT 204 (247)
Q Consensus 127 iDvVVgve~rGf~lA~~LA~~L-g~p~v~iRK~~kl~~~~~s~~y~~e~g~~~-~~l~~~~~~~GkrVLIVDDIltTG~T 204 (247)
..++|++..+|+.++..+.+.+ ..++..+.+.+.. +.++.. +........+|++|+||||+++||+|
T Consensus 71 ~~~vV~Ilr~G~~~~~~L~~~l~~~~~~~i~~~r~~-----------~t~~~~~~~~~lp~~i~~~~VllvDd~l~TG~T 139 (209)
T 1i5e_A 71 KLGVIPILRAGIGMVDGILKLIPAAKVGHIGLYRDP-----------QTLKPVEYYVKLPSDVEERDFIIVDPMLATGGS 139 (209)
T ss_dssp CEEEEEBTTGGGGGHHHHHHHCTTSEECEEEEECCT-----------TCSSCEEEEEECCTTTTTSEEEEECSEESSSHH
T ss_pred ceEEEEEecCChHHHHHHHHhCCCCeEEEEEEEEcC-----------CCCceEEEEEcCCCccCCCEEEEEcCCCcCHHH
Confidence 4578999999999999999988 4444333222110 001111 11122234689999999999999999
Q ss_pred HHHHHHHHHhCCCeEEEEEEEEeccCcccccccCC
Q 025851 205 LSAAIRLLERVGVHVVECACVIELPELKGRERLGE 239 (247)
Q Consensus 205 l~aa~~lLk~aGa~vV~v~vlv~~~~~~grekL~~ 239 (247)
+.++++.|++.|++.+.+++++..+ .|.++|..
T Consensus 140 ~~~a~~~L~~~G~~~I~~~~lv~~~--~g~~~l~~ 172 (209)
T 1i5e_A 140 AVAAIDALKKRGAKSIKFMCLIAAP--EGVKAVET 172 (209)
T ss_dssp HHHHHHHHHHTTCCCEEEECSEECH--HHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEEEEEECH--HHHHHHHH
Confidence 9999999999999999999998765 57777653
No 51
>1o5o_A Uracil phosphoribosyltransferase; TM0721, structural genomic PSI, protein structure initiative, joint center for structu genomics; HET: U5P; 2.30A {Thermotoga maritima} SCOP: c.61.1.1
Probab=98.94 E-value=1.6e-09 Score=94.31 Aligned_cols=99 Identities=19% Similarity=0.252 Sum_probs=72.5
Q ss_pred cEEEecCCcchhHHHHHHHHh-CCCeEEeeccCCCCCceeeeeeeecccccee-EEeecccCCCCEEEEEecchhhhHHH
Q 025851 128 SVVAGIEARGFIFGPPIALAI-GAKFVPMRKPKKLPGEVISEEYSLEYGKDVM-EMHVGAVQAGERALIVDDLVATGGTL 205 (247)
Q Consensus 128 DvVVgve~rGf~lA~~LA~~L-g~p~v~iRK~~kl~~~~~s~~y~~e~g~~~~-~l~~~~~~~GkrVLIVDDIltTG~Tl 205 (247)
-++|++..+|+.++..+++.+ ++++..+...+... .++... ........+|++|+||||+++||+|+
T Consensus 84 lviV~IlrgG~~~~~~l~~~lp~a~vg~I~~~Rd~~-----------t~~~~~~~~~lp~di~gr~VilvDd~laTG~Tl 152 (221)
T 1o5o_A 84 IVVVPILRAGLVMADGILELLPNASVGHIGIYRDPE-----------TLQAVEYYAKLPPLNDDKEVFLLDPMLATGVSS 152 (221)
T ss_dssp EEEEEEETTHHHHHHHHHHHSTTCEECEEEEEECTT-----------TCCEEEEEEECCCCCTTCEEEEECSEESSSHHH
T ss_pred EEEEEEecchHHHHHHHHHhCCCCcEEEEEEEEcCC-----------CCceeEEEecCCCccCCCEEEEECCccccHHHH
Confidence 378999999999999999999 55544433222100 011111 11112346899999999999999999
Q ss_pred HHHHHHHHhCCCeEEEEEEEEeccCcccccccCC
Q 025851 206 SAAIRLLERVGVHVVECACVIELPELKGRERLGE 239 (247)
Q Consensus 206 ~aa~~lLk~aGa~vV~v~vlv~~~~~~grekL~~ 239 (247)
.++++.|++.|++.+.+++++..+ .|.++|..
T Consensus 153 ~~ai~~L~~~G~~~I~~~~lv~~~--~g~~~l~~ 184 (221)
T 1o5o_A 153 IKAIEILKENGAKKITLVALIAAP--EGVEAVEK 184 (221)
T ss_dssp HHHHHHHHHTTCCEEEEECSEECH--HHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEEEEeCH--HHHHHHHH
Confidence 999999999999999999998876 47777653
No 52
>2e55_A Uracil phosphoribosyltransferase; structural genomics; 2.15A {Aquifex aeolicus}
Probab=98.83 E-value=1.4e-08 Score=87.68 Aligned_cols=96 Identities=24% Similarity=0.268 Sum_probs=69.8
Q ss_pred cEEEecCCcchhHHHHHHHHhCC-CeEEee-ccCCCCCceeeeeeeecccccee-EEeecccCCCCEEEEEecchhhhHH
Q 025851 128 SVVAGIEARGFIFGPPIALAIGA-KFVPMR-KPKKLPGEVISEEYSLEYGKDVM-EMHVGAVQAGERALIVDDLVATGGT 204 (247)
Q Consensus 128 DvVVgve~rGf~lA~~LA~~Lg~-p~v~iR-K~~kl~~~~~s~~y~~e~g~~~~-~l~~~~~~~GkrVLIVDDIltTG~T 204 (247)
-++|++.++|+.++..+.+.+.- ++..+. .+.. +.++..+ ..... ..+|++|+||||+++||+|
T Consensus 70 ~~~V~ILraG~~~~~~l~~~lp~~~vg~i~~~rd~------------~t~~~~~~~~~lp-di~~r~vilvDd~laTG~T 136 (208)
T 2e55_A 70 IVFVPILRAGLSFLEGALQVVPNAKVGFLGIKRNE------------ETLESHIYYSRLP-ELKGKIVVILDPMLATGGT 136 (208)
T ss_dssp EEEEEEETTTHHHHHHHHHHSTTCEECEEEEEECT------------TTCCEEEEEEECC-CCBTSEEEEECSEESSSHH
T ss_pred EEEEEEecchHHHHHHHHHhCCCCcEEEEEEEEec------------CCCceEEEecCCC-CCCCCEEEEECCccccHHH
Confidence 37899999999999999998852 111111 1110 0011111 11223 4689999999999999999
Q ss_pred HHHHHHHHHhCCCeEEEEEEEEeccCcccccccC
Q 025851 205 LSAAIRLLERVGVHVVECACVIELPELKGRERLG 238 (247)
Q Consensus 205 l~aa~~lLk~aGa~vV~v~vlv~~~~~~grekL~ 238 (247)
+.++++.|++.|++.+.+++++..+ .|.++|.
T Consensus 137 ~~~ai~~L~~~G~~~I~~~~lv~~~--~g~~~l~ 168 (208)
T 2e55_A 137 LEVALREILKHSPLKVKSVHAIAAP--EGLKRIE 168 (208)
T ss_dssp HHHHHHHHHTTCBSEEEEEEEEECH--HHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEEEEEECH--HHHHHHH
Confidence 9999999999999999999999876 5777765
No 53
>2ehj_A Uracil phosphoribosyltransferase; structural genomics; 2.80A {Escherichia coli}
Probab=98.81 E-value=1.8e-08 Score=86.92 Aligned_cols=98 Identities=22% Similarity=0.273 Sum_probs=69.4
Q ss_pred cEEEecCCcchhHHHHHHHHhCC-CeEEeeccCCCCCceeeeeeeeccccceeEE-eecccCCCCEEEEEecchhhhHHH
Q 025851 128 SVVAGIEARGFIFGPPIALAIGA-KFVPMRKPKKLPGEVISEEYSLEYGKDVMEM-HVGAVQAGERALIVDDLVATGGTL 205 (247)
Q Consensus 128 DvVVgve~rGf~lA~~LA~~Lg~-p~v~iRK~~kl~~~~~s~~y~~e~g~~~~~l-~~~~~~~GkrVLIVDDIltTG~Tl 205 (247)
-++|++.++|+.++..+.+.+.- ++-.+.-.+ +. +.++-..+. .......|++|+||||+++||+|+
T Consensus 71 l~~V~ILraG~~~~~~l~~~ip~~~vg~i~~~r----------d~-~t~~~~~~~~~lp~di~~r~VilvDd~laTG~T~ 139 (208)
T 2ehj_A 71 ITVVPILRAGLGMMDGVLENVPSARISVVGMYR----------NE-ETLEPVPYFQKLVSNIDERMALIVDPMLATGGSV 139 (208)
T ss_dssp CEEEEBTTGGGGGHHHHHHHCTTCEECEEEEEE----------CT-TTCCEEEEEEECCSCGGGCEEEEEEEEESSCHHH
T ss_pred eEEEEeecCHHHHHHHHHHhCCcCceeEEEEEE----------cC-CCCceEEEecCCCCccCCCEEEEECCccccHHHH
Confidence 37999999999999999998851 111111000 00 001111111 112346899999999999999999
Q ss_pred HHHHHHHHhCCCeEEEEEEEEeccCcccccccC
Q 025851 206 SAAIRLLERVGVHVVECACVIELPELKGRERLG 238 (247)
Q Consensus 206 ~aa~~lLk~aGa~vV~v~vlv~~~~~~grekL~ 238 (247)
.++++.|++.|++.+.+++++..+ .|.++|.
T Consensus 140 ~~ai~~L~~~G~~~I~~~~lv~~p--~g~~~l~ 170 (208)
T 2ehj_A 140 IATIDLLKKAGCSSIKVLVLVAAP--EGIAALE 170 (208)
T ss_dssp HHHHHHHHHTTCCEEEEEEEEECH--HHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEEEEeCH--HHHHHHH
Confidence 999999999999999999999876 4777764
No 54
>1v9s_A Uracil phosphoribosyltransferase; pyrimidine salvage, oligomerization, structural genomics, RI structural genomics/proteomics initiative; 2.10A {Thermus thermophilus} SCOP: c.61.1.1
Probab=98.68 E-value=1.9e-08 Score=86.77 Aligned_cols=98 Identities=24% Similarity=0.323 Sum_probs=68.3
Q ss_pred cEEEecCCcchhHHHHHHHHhC-CCeEEeeccCCCCCceeeeeeeecccccee-EEeecccCCCCEEEEEecchhhhHHH
Q 025851 128 SVVAGIEARGFIFGPPIALAIG-AKFVPMRKPKKLPGEVISEEYSLEYGKDVM-EMHVGAVQAGERALIVDDLVATGGTL 205 (247)
Q Consensus 128 DvVVgve~rGf~lA~~LA~~Lg-~p~v~iRK~~kl~~~~~s~~y~~e~g~~~~-~l~~~~~~~GkrVLIVDDIltTG~Tl 205 (247)
-++|++-++|+.++..+.+.+. +++-.+.-.+ +. +.++-.. ........+|++|+||||+++||+|+
T Consensus 71 l~~V~ILraG~~~~~~l~~~ip~~~vg~I~~~r----------d~-~t~~~~~~~~~lp~di~~r~vilvDd~laTG~T~ 139 (208)
T 1v9s_A 71 LALVAILRAGLVMVEGILKLVPHARVGHIGLYR----------DP-ESLNPVQYYIKLPPDIAERRAFLLDPMLATGGSA 139 (208)
T ss_dssp CEEEEETTTHHHHHHHHHTTCTTCEEEEEEEC--------------------CEEEECCSCGGGSCEEEECSEESSSHHH
T ss_pred eEEEEeccchHHHHHHHHHhCCCCeeeEEEEEE----------cC-CCCCceEEeccCCCccCCCEEEEECCccccHHHH
Confidence 3789999999999999998775 1222221111 00 0011111 11112346799999999999999999
Q ss_pred HHHHHHHHhCCCeEEEEEEEEeccCcccccccC
Q 025851 206 SAAIRLLERVGVHVVECACVIELPELKGRERLG 238 (247)
Q Consensus 206 ~aa~~lLk~aGa~vV~v~vlv~~~~~~grekL~ 238 (247)
.++++.|++.|++.+.+++++..+ .|.++|.
T Consensus 140 ~~ai~~L~~~G~~~I~~~~lv~~~--~g~~~l~ 170 (208)
T 1v9s_A 140 SLALSLLKERGATGVKLMAILAAP--EGLERIA 170 (208)
T ss_dssp HHHHHHHHHTTCCSCEEEEEEECH--HHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEEEEeCH--HHHHHHH
Confidence 999999999999999999998876 4777765
No 55
>1bd3_D Uprtase, uracil phosphoribosyltransferase; glycosyltransferase; 1.93A {Toxoplasma gondii} SCOP: c.61.1.1 PDB: 1bd4_D 1jlr_A* 1jls_B* 1upf_D 1upu_D*
Probab=98.66 E-value=4.4e-08 Score=86.37 Aligned_cols=96 Identities=18% Similarity=0.231 Sum_probs=68.3
Q ss_pred EEEecCCcchhHHHHHHHHhC-CCeEEee-ccCCCCCceeeeeeeecccccee-EEeecccCCCCEEEEEecchhhhHHH
Q 025851 129 VVAGIEARGFIFGPPIALAIG-AKFVPMR-KPKKLPGEVISEEYSLEYGKDVM-EMHVGAVQAGERALIVDDLVATGGTL 205 (247)
Q Consensus 129 vVVgve~rGf~lA~~LA~~Lg-~p~v~iR-K~~kl~~~~~s~~y~~e~g~~~~-~l~~~~~~~GkrVLIVDDIltTG~Tl 205 (247)
++|++.++|+.++..+.+.+. +++-.+. .+.. +.++-.+ .........|++|+||||+++||+|+
T Consensus 105 ~~V~ILRaG~~m~~~l~~~ip~a~vg~I~~~Rd~------------~t~~~~~~~~~lp~di~~r~VilvDdmlaTG~T~ 172 (243)
T 1bd3_D 105 CGVSIVRAGESMESGLRAVCRGVRIGKILIQRDE------------TTAEPKLIYEKLPADIRERWVMLLDPMCATAGSV 172 (243)
T ss_dssp EEEEEETTTHHHHHHHHHHSTTCCEEEEEEEECS------------SSCCEEEEEEECCTTGGGSEEEEECSEESSCHHH
T ss_pred EEEEEEcchHHHHHHHHHhCCcCeeeeEEEEEcC------------CCCCeEEEeccCCcccCCCEEEEECCccccHHHH
Confidence 688899999999999999885 2222221 0110 0011111 11112346789999999999999999
Q ss_pred HHHHHHHHhCCC--eEEEEEEEEeccCcccccccC
Q 025851 206 SAAIRLLERVGV--HVVECACVIELPELKGRERLG 238 (247)
Q Consensus 206 ~aa~~lLk~aGa--~vV~v~vlv~~~~~~grekL~ 238 (247)
.++++.|++.|+ +.+.+++++..+ .|.++|.
T Consensus 173 ~~ai~~L~~~G~~p~~I~~~~lvaap--~g~~~l~ 205 (243)
T 1bd3_D 173 CKAIEVLLRLGVKEERIIFVNILAAP--QGIERVF 205 (243)
T ss_dssp HHHHHHHHHHTCCGGGEEEEEEEECH--HHHHHHH
T ss_pred HHHHHHHHHcCCCcceEEEEEEEeCH--HHHHHHH
Confidence 999999999999 888989998876 4777764
No 56
>3dmp_A Uracil phosphoribosyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.60A {Burkholderia pseudomallei} SCOP: c.61.1.1
Probab=98.45 E-value=2.9e-07 Score=79.88 Aligned_cols=97 Identities=16% Similarity=0.170 Sum_probs=66.9
Q ss_pred cEEEecCCcchhHHHHHHHHhC-CCeEEeeccCCCCCceeeeeeeeccccceeEEeecccCCCCEEEEEecchhhhHHHH
Q 025851 128 SVVAGIEARGFIFGPPIALAIG-AKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLS 206 (247)
Q Consensus 128 DvVVgve~rGf~lA~~LA~~Lg-~p~v~iRK~~kl~~~~~s~~y~~e~g~~~~~l~~~~~~~GkrVLIVDDIltTG~Tl~ 206 (247)
-++|++.++|..++..+.+.+. +++-.+--.+. . .+ +....+.... ...|++|+||||+++||+|+.
T Consensus 79 i~~V~IlRaG~~m~~~l~~~ip~a~vg~i~~~Rd-~-~t---------~p~~~~~~lP-~i~~~~VilvD~~laTG~T~~ 146 (217)
T 3dmp_A 79 LAIVPVLRAGVGMSDGLLELIPSARVGHIGVYRA-D-DH---------RPVEYLVRLP-DLEDRIFILCDPMVATGYSAA 146 (217)
T ss_dssp EEEEEEETTTHHHHHHHHHHCTTSEECEEECSCC-C-SS---------SCCCSEEECC-CCTTCEEEEECSEESSSHHHH
T ss_pred EEEEEecccchHHHHHHHHhCcCCceeEEEEEEC-C-CC---------CcEEEeecCC-CCCCCEEEEEcCcccccHHHH
Confidence 3688888999999999999884 33322211110 0 00 0000111113 467999999999999999999
Q ss_pred HHHHHHHhCCC--eEEEEEEEEeccCcccccccC
Q 025851 207 AAIRLLERVGV--HVVECACVIELPELKGRERLG 238 (247)
Q Consensus 207 aa~~lLk~aGa--~vV~v~vlv~~~~~~grekL~ 238 (247)
++++.|++.|+ +.+.+++++..+ .|-+++.
T Consensus 147 ~ai~~L~~~G~pe~~I~~~~~vaa~--egl~~l~ 178 (217)
T 3dmp_A 147 HAIDVLKRRGVPGERLMFLALVAAP--EGVQVFQ 178 (217)
T ss_dssp HHHHHHHTTTCCGGGEEEECSEECH--HHHHHHH
T ss_pred HHHHHHHHcCCCcCeEEEEEEEeCH--HHHHHHH
Confidence 99999999999 888888888765 4655553
No 57
>1xtt_A Probable uracil phosphoribosyltransferase; tetramer, type 1 phosphoribosyltransferase, UMP complex; HET: U5P; 1.80A {Sulfolobus solfataricus} SCOP: c.61.1.1 PDB: 1vst_A* 1xtu_A* 1xtv_A* 3g6w_A*
Probab=98.25 E-value=2.5e-06 Score=73.88 Aligned_cols=102 Identities=12% Similarity=0.091 Sum_probs=65.7
Q ss_pred cEEEecCCcchhHHHHHHHHhC-CCeEEee-ccCCCCCceeeeeeeecccccee-EEeecccCCCC--EEEEEecchhhh
Q 025851 128 SVVAGIEARGFIFGPPIALAIG-AKFVPMR-KPKKLPGEVISEEYSLEYGKDVM-EMHVGAVQAGE--RALIVDDLVATG 202 (247)
Q Consensus 128 DvVVgve~rGf~lA~~LA~~Lg-~p~v~iR-K~~kl~~~~~s~~y~~e~g~~~~-~l~~~~~~~Gk--rVLIVDDIltTG 202 (247)
-++|++.++|..++..+...+. +++-.+. .+....+. ...+. .+-.. +.... ...++ +|+||||+++||
T Consensus 73 i~iV~IlRaG~~m~~gl~~~lp~a~vg~I~~~Rd~~t~~--~~~~~---~~p~~~y~klP-~i~~~~~~VilvDp~laTG 146 (216)
T 1xtt_A 73 IVIINILRAAVPLVEGLLKAFPKARQGVIGASRVEVDGK--EVPKD---MDVYIYYKKIP-DIRAKVDNVIIADPMIATA 146 (216)
T ss_dssp EEEEEEETTTHHHHHHHHHHCTTCEEEEEEEEECCCCCS--SCCSC---CCEEEEEEECC-CCCTTTCEEEEECSEESSS
T ss_pred EEEEeecCCcHHHHHHHHHHcccCccceEEEEECCCccc--ccccc---cCceEeeccCC-CccCCcceEEEEcCCccch
Confidence 3688889999999999999874 2322211 11110000 00000 00001 11112 35788 999999999999
Q ss_pred HHHHHHHHHHHhCCC-eEEEEEEEEeccCcccccccC
Q 025851 203 GTLSAAIRLLERVGV-HVVECACVIELPELKGRERLG 238 (247)
Q Consensus 203 ~Tl~aa~~lLk~aGa-~vV~v~vlv~~~~~~grekL~ 238 (247)
+|+.++++.|++ |+ +.+.+++++.-+ .|.++|.
T Consensus 147 ~T~~~ai~~L~~-G~p~~I~~~~~vaa~--~gl~~l~ 180 (216)
T 1xtt_A 147 STMLKVLEEVVK-ANPKRIYIVSIISSE--YGVNKIL 180 (216)
T ss_dssp HHHHHHHHHHGG-GCCSEEEEECSEEEH--HHHHHHH
T ss_pred HHHHHHHHHHHh-CCCCeEEEEEEecCH--HHHHHHH
Confidence 999999999999 99 888888888765 4666664
No 58
>3dah_A Ribose-phosphate pyrophosphokinase; pyrophosphoki seattle structural genomics center for infectious disease, magnesium, metal binding; HET: AMP; 2.30A {Burkholderia pseudomallei}
Probab=57.67 E-value=36 Score=30.45 Aligned_cols=73 Identities=8% Similarity=0.149 Sum_probs=45.0
Q ss_pred CcchhHHHHHHHHhCCCeEEeeccCCCCCceeeeeeeeccccceeEEeecccCCCCEEEEEecchhhh----HHHHHHHH
Q 025851 135 ARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATG----GTLSAAIR 210 (247)
Q Consensus 135 ~rGf~lA~~LA~~Lg~p~v~iRK~~kl~~~~~s~~y~~e~g~~~~~l~~~~~~~GkrVLIVDDIltTG----~Tl~aa~~ 210 (247)
...-.+|..+|..||+++..+..++ .. .+...++....++|+.|.||=.....- =-+.-+++
T Consensus 14 ~~~~~La~~ia~~lg~~l~~~~~~~------------F~--dGE~~v~i~esvrg~dV~iiqs~~~p~nd~lmeLl~~id 79 (319)
T 3dah_A 14 NANPALAQEVVKILGIPLGKAMVSR------------FS--DGEIQVEIQENVRGKDVFVLQSTCAPTNDNLMELMIMVD 79 (319)
T ss_dssp SSCHHHHHHHHHHHTSCCCCEEEEE------------CT--TSCEEEEECSCCBTCEEEEECCCCSSHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHhCCceeeeEEEE------------CC--CCCEEEEECCCcCCCeEEEEccCCCCCcHHHHHHHHHHH
Confidence 3345799999999999875442211 11 122333334457899999996654321 12445667
Q ss_pred HHHhCCCeEEE
Q 025851 211 LLERVGVHVVE 221 (247)
Q Consensus 211 lLk~aGa~vV~ 221 (247)
.++++||+.+.
T Consensus 80 A~k~asA~rIt 90 (319)
T 3dah_A 80 ALKRASAGRIT 90 (319)
T ss_dssp HHHHTTBSEEE
T ss_pred HHHHcCCcEEE
Confidence 77899998765
No 59
>1u9y_A RPPK;, ribose-phosphate pyrophosphokinase; PRPP synthase, transferase; 2.65A {Methanocaldococcus jannaschii} SCOP: c.61.1.2 c.61.1.2 PDB: 1u9z_A*
Probab=56.59 E-value=56 Score=28.35 Aligned_cols=71 Identities=10% Similarity=0.088 Sum_probs=44.3
Q ss_pred chhHHHHHHHHhCCCeEEeeccCCCCCceeeeeeeeccccceeEEeecccCCCCEEEEEecchhhhH---HHHHHHHHHH
Q 025851 137 GFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGG---TLSAAIRLLE 213 (247)
Q Consensus 137 Gf~lA~~LA~~Lg~p~v~iRK~~kl~~~~~s~~y~~e~g~~~~~l~~~~~~~GkrVLIVDDIltTG~---Tl~aa~~lLk 213 (247)
.-.+|..+|..||+++..+..++- ..+...++.....+|+.|.||-.....-. -+.-+++.++
T Consensus 9 ~~~la~~ia~~l~~~l~~~~~~~F--------------~dGE~~v~i~~~vrg~dv~iiqs~~~pn~~lmell~~~~a~~ 74 (284)
T 1u9y_A 9 SQNLAFKVAKLLNTKLTRVEYKRF--------------PDNEIYVRIVDEINDDEAVIINTQKNQNDAIVETILLCDALR 74 (284)
T ss_dssp CHHHHHHHHHHTTCCEECEEEEEC--------------TTCCEEEEECSCCCSSEEEEECCCSSHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhCCeeeeeEEEEC--------------CCCCEEEEeCCCCCCCEEEEEeCCCCCcHHHHHHHHHHHHHH
Confidence 347899999999998875432211 11223333344468999999987654211 2334556778
Q ss_pred hCCCeEEE
Q 025851 214 RVGVHVVE 221 (247)
Q Consensus 214 ~aGa~vV~ 221 (247)
++||+.+.
T Consensus 75 ~~~a~~i~ 82 (284)
T 1u9y_A 75 DEGVKKIT 82 (284)
T ss_dssp TTTCCEEE
T ss_pred HcCCceEE
Confidence 89998754
No 60
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=55.18 E-value=14 Score=28.47 Aligned_cols=32 Identities=25% Similarity=0.370 Sum_probs=21.5
Q ss_pred CCCCEEEEEecchhhhHHHHHHHHHHHhCCCeEEE
Q 025851 187 QAGERALIVDDLVATGGTLSAAIRLLERVGVHVVE 221 (247)
Q Consensus 187 ~~GkrVLIVDDIltTG~Tl~aa~~lLk~aGa~vV~ 221 (247)
.++-|||||||=-+.-.. ..++|++.|..++.
T Consensus 10 ~k~~rILiVDD~~~~r~~---l~~~L~~~G~~~v~ 41 (134)
T 3to5_A 10 NKNMKILIVDDFSTMRRI---VKNLLRDLGFNNTQ 41 (134)
T ss_dssp CTTCCEEEECSCHHHHHH---HHHHHHHTTCCCEE
T ss_pred CCCCEEEEEeCCHHHHHH---HHHHHHHcCCcEEE
Confidence 356689999997665544 44566778876443
No 61
>3s5j_B Ribose-phosphate pyrophosphokinase 1; nucleotide synthesis, transferase; 2.02A {Homo sapiens} PDB: 2hcr_A* 3efh_A 2h06_A 2h07_A 2h08_A
Probab=54.50 E-value=50 Score=29.61 Aligned_cols=72 Identities=17% Similarity=0.120 Sum_probs=42.7
Q ss_pred chhHHHHHHHHhCCCeEEeeccCCCCCceeeeeeeeccccceeEEeecccCCCCEEEEEecchhh-hH---HHHHHHHHH
Q 025851 137 GFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVAT-GG---TLSAAIRLL 212 (247)
Q Consensus 137 Gf~lA~~LA~~Lg~p~v~iRK~~kl~~~~~s~~y~~e~g~~~~~l~~~~~~~GkrVLIVDDIltT-G~---Tl~aa~~lL 212 (247)
.-.+|..+|..||+|+..+..++- ..+...++....++|+.|.||=..... -. -+.-+++.+
T Consensus 12 ~~~La~~ia~~lg~~l~~~~~~~F--------------~dGE~~v~i~esvrg~dV~iiqs~~~p~nd~lmeLl~~idA~ 77 (326)
T 3s5j_B 12 HQDLSQKIADRLGLELGKVVTKKF--------------SNQETCVEIGESVRGEDVYIVQSGCGEINDNLMELLIMINAC 77 (326)
T ss_dssp CCHHHHHHHHHTTCCCCCEEEEEC--------------TTSCEEEEECSCCTTCEEEEECCCCSCHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhCCceeeeEEeEC--------------CCCCEEEEECCCcCCCcEEEEecCCCCccHHHHHHHHHHHHH
Confidence 347899999999998754422111 112233333445789999998654321 11 223445667
Q ss_pred HhCCCeEEEE
Q 025851 213 ERVGVHVVEC 222 (247)
Q Consensus 213 k~aGa~vV~v 222 (247)
++++|+.+.+
T Consensus 78 k~asA~rIt~ 87 (326)
T 3s5j_B 78 KIASASRVTA 87 (326)
T ss_dssp HHTTCSEEEE
T ss_pred HhcCCcEEEE
Confidence 7889887654
No 62
>3lkv_A Uncharacterized conserved domain protein; ATPase binding cassette, PSI, MCSG, structural genomics, Pro structure initiative; HET: PHE; 2.20A {Vibrio cholerae}
Probab=48.37 E-value=48 Score=28.27 Aligned_cols=117 Identities=15% Similarity=0.093 Sum_probs=58.8
Q ss_pred EechhhccCHHHHHHHHHHHHHHhccCCccEEEecCCcchhHHHHHHHH-hCCCeEEeeccC----------CCCCceee
Q 025851 99 QDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALA-IGAKFVPMRKPK----------KLPGEVIS 167 (247)
Q Consensus 99 ~Di~~ll~dp~~~~~l~~~La~~~~~~~iDvVVgve~rGf~lA~~LA~~-Lg~p~v~iRK~~----------kl~~~~~s 167 (247)
+|..+--.|+.....+++.| ...++|+|+++.+-. +..++.. -++|+++.--.. ..++..++
T Consensus 46 ~~~~~a~gd~~~~~~~~~~l----~~~~~DlIiai~t~a---a~a~~~~~~~iPVVf~~v~dp~~~~l~~~~~~~g~nvt 118 (302)
T 3lkv_A 46 FDYKTAQGNPAIAVQIARQF----VGENPDVLVGIATPT---AQALVSATKTIPIVFTAVTDPVGAKLVKQLEQPGKNVT 118 (302)
T ss_dssp EEEEECTTCHHHHHHHHHHH----HTTCCSEEEEESHHH---HHHHHHHCSSSCEEEEEESCTTTTTSCSCSSSCCSSEE
T ss_pred EEEEeCCCCHHHHHHHHHHH----HhcCCcEEEEcCCHH---HHHHHhhcCCCCeEEEecCCcchhhhcccccCCCCcEE
Confidence 45555567887766665554 445799999876432 2233322 367887653211 01121111
Q ss_pred eeeeeccccceeEEeecccCCCCEEEEEecchhhh--HHHHHHHHHHHhCCCeEEEE
Q 025851 168 EEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATG--GTLSAAIRLLERVGVHVVEC 222 (247)
Q Consensus 168 ~~y~~e~g~~~~~l~~~~~~~GkrVLIVDDIltTG--~Tl~aa~~lLk~aGa~vV~v 222 (247)
...........+++-.......++|.++-|--.++ .....+.+.+++.|.+++..
T Consensus 119 Gv~~~~~~~~~l~l~~~l~P~~k~vgvi~~~~~~~s~~~~~~~~~~~~~~g~~~v~~ 175 (302)
T 3lkv_A 119 GLSDLSPVEQHVELIKEILPNVKSIGVVYNPGEANAVSLMELLKLSAAKHGIKLVEA 175 (302)
T ss_dssp EEECCCCHHHHHHHHHHHSTTCCEEEEEECTTCHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred EEECCcCHHHHHHHHHHhCCCCCEEEEEeCCCcccHHHHHHHHHHHHHHcCCEEEEE
Confidence 11110001111222112234578887776644443 23445666777888887654
No 63
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=47.08 E-value=34 Score=24.18 Aligned_cols=29 Identities=24% Similarity=0.240 Sum_probs=17.7
Q ss_pred CCEEEEEecchhhhHHHHHHHHHHHhCCCeEE
Q 025851 189 GERALIVDDLVATGGTLSAAIRLLERVGVHVV 220 (247)
Q Consensus 189 GkrVLIVDDIltTG~Tl~aa~~lLk~aGa~vV 220 (247)
+++||||||=-..... ....|++.|.++.
T Consensus 2 ~~~ilivdd~~~~~~~---l~~~L~~~g~~v~ 30 (120)
T 3f6p_A 2 DKKILVVDDEKPIADI---LEFNLRKEGYEVH 30 (120)
T ss_dssp CCEEEEECSCHHHHHH---HHHHHHHTTCEEE
T ss_pred CCeEEEEECCHHHHHH---HHHHHHhCCEEEE
Confidence 3689999986544433 3455566676543
No 64
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=46.18 E-value=35 Score=24.22 Aligned_cols=28 Identities=25% Similarity=0.335 Sum_probs=17.7
Q ss_pred CEEEEEecchhhhHHHHHHHHHHHhCCCeEE
Q 025851 190 ERALIVDDLVATGGTLSAAIRLLERVGVHVV 220 (247)
Q Consensus 190 krVLIVDDIltTG~Tl~aa~~lLk~aGa~vV 220 (247)
++||||||=-.... .....|++.|.+++
T Consensus 3 ~~ILivdd~~~~~~---~l~~~l~~~g~~v~ 30 (122)
T 3gl9_A 3 KKVLLVDDSAVLRK---IVSFNLKKEGYEVI 30 (122)
T ss_dssp CEEEEECSCHHHHH---HHHHHHHHTTCEEE
T ss_pred ceEEEEeCCHHHHH---HHHHHHHHCCcEEE
Confidence 58999998654433 34455666776554
No 65
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=45.87 E-value=37 Score=24.05 Aligned_cols=31 Identities=23% Similarity=0.273 Sum_probs=20.8
Q ss_pred CCCCEEEEEecchhhhHHHHHHHHHHHhCCCeEE
Q 025851 187 QAGERALIVDDLVATGGTLSAAIRLLERVGVHVV 220 (247)
Q Consensus 187 ~~GkrVLIVDDIltTG~Tl~aa~~lLk~aGa~vV 220 (247)
..+++||||||=-..... ..+.|++.|..++
T Consensus 5 ~~~~~ilivdd~~~~~~~---l~~~L~~~g~~v~ 35 (130)
T 3eod_A 5 LVGKQILIVEDEQVFRSL---LDSWFSSLGATTV 35 (130)
T ss_dssp TTTCEEEEECSCHHHHHH---HHHHHHHTTCEEE
T ss_pred CCCCeEEEEeCCHHHHHH---HHHHHHhCCceEE
Confidence 357899999986655444 4455677777654
No 66
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=43.78 E-value=22 Score=25.22 Aligned_cols=35 Identities=14% Similarity=0.088 Sum_probs=31.8
Q ss_pred cCCCCEEEEEecchhhhHHHHHHHHHHHhCCCeEE
Q 025851 186 VQAGERALIVDDLVATGGTLSAAIRLLERVGVHVV 220 (247)
Q Consensus 186 ~~~GkrVLIVDDIltTG~Tl~aa~~lLk~aGa~vV 220 (247)
+..|++|+=|++.-.+|.|...+.++|++.|-++.
T Consensus 41 l~~GD~Il~VNG~~v~~~~~~evv~llr~~g~~V~ 75 (82)
T 1r6j_A 41 LLTEHNICEINGQNVIGLKDSQIADILSTSGTVVT 75 (82)
T ss_dssp CCSSEEEEEETTEECTTCCHHHHHHHHHHSCSEEE
T ss_pred CCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCEEE
Confidence 67899999999999999999999999998887654
No 67
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=42.04 E-value=40 Score=24.41 Aligned_cols=30 Identities=27% Similarity=0.358 Sum_probs=17.4
Q ss_pred CCCEEEEEecchhhhHHHHHHHHHHHhCCCeEE
Q 025851 188 AGERALIVDDLVATGGTLSAAIRLLERVGVHVV 220 (247)
Q Consensus 188 ~GkrVLIVDDIltTG~Tl~aa~~lLk~aGa~vV 220 (247)
++.+||||||=-..... ..+.|++.|..+.
T Consensus 4 ~~~~ilivdd~~~~~~~---l~~~L~~~g~~v~ 33 (140)
T 3h5i_A 4 KDKKILIVEDSKFQAKT---IANILNKYGYTVE 33 (140)
T ss_dssp --CEEEEECSCHHHHHH---HHHHHHHTTCEEE
T ss_pred CCcEEEEEeCCHHHHHH---HHHHHHHcCCEEE
Confidence 46789999986554443 3445556665543
No 68
>1dku_A Protein (phosphoribosyl pyrophosphate synthetase); open alpha-beta structure, domain duplication, phosphoribosyltransferase type I fold; HET: AP2 ABM; 2.20A {Bacillus subtilis} SCOP: c.61.1.2 c.61.1.2 PDB: 1dkr_A* 1ibs_A*
Probab=40.38 E-value=1.2e+02 Score=26.77 Aligned_cols=74 Identities=11% Similarity=0.148 Sum_probs=43.9
Q ss_pred CcchhHHHHHHHHhCCCeEEeeccCCCCCceeeeeeeeccccceeEEeecccCCCCEEEEEecchhh-hHH---HHHHHH
Q 025851 135 ARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVAT-GGT---LSAAIR 210 (247)
Q Consensus 135 ~rGf~lA~~LA~~Lg~p~v~iRK~~kl~~~~~s~~y~~e~g~~~~~l~~~~~~~GkrVLIVDDIltT-G~T---l~aa~~ 210 (247)
...-.+|..+|..||+++..+..++- ..+...++....++|+.|.||-..-.. -.. +.-.+.
T Consensus 16 ~~~~~la~~ia~~lg~~l~~~~~~~F--------------~dGE~~v~i~e~vrg~dv~iiqs~~~~~nd~lmell~~~~ 81 (317)
T 1dku_A 16 NSNPELAKEIADIVGVQLGKCSVTRF--------------SDGEVQINIEESIRGCDCYIIQSTSDPVNEHIMELLIMVD 81 (317)
T ss_dssp SSCHHHHHHHHHHHTCCCCCEEEEEC--------------TTSCEEEEECSCCTTCEEEEECCCCSSHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHhCCeeEeeEEEEC--------------CCCCEEEEecCCCCCCEEEEEcCCCCCCcHHHHHHHHHHH
Confidence 34458999999999998765432211 112233333445689999998775432 122 333445
Q ss_pred HHHhCCCeEEEE
Q 025851 211 LLERVGVHVVEC 222 (247)
Q Consensus 211 lLk~aGa~vV~v 222 (247)
.+++++++.+.+
T Consensus 82 a~~~~~a~~i~a 93 (317)
T 1dku_A 82 ALKRASAKTINI 93 (317)
T ss_dssp HHHHTTCSEEEE
T ss_pred HhhccCcceEEE
Confidence 566788876553
No 69
>2r44_A Uncharacterized protein; putative ATPase, structural genomics, joint center for struc genomics, JCSG; HET: MSE PG4; 2.00A {Cytophaga hutchinsonii atcc 33406}
Probab=38.82 E-value=1.8e+02 Score=24.64 Aligned_cols=104 Identities=13% Similarity=0.152 Sum_probs=57.8
Q ss_pred ccCHHHHHHHHHHHHHHhccCCccEEEecCCcch-hHHHHHHHHhCCCeEEeecc-CCCCCceeeeeeeeccccceeEEe
Q 025851 105 LLDTKAFRDTIDLFVERYKDKNISVVAGIEARGF-IFGPPIALAIGAKFVPMRKP-KKLPGEVISEEYSLEYGKDVMEMH 182 (247)
Q Consensus 105 l~dp~~~~~l~~~La~~~~~~~iDvVVgve~rGf-~lA~~LA~~Lg~p~v~iRK~-~kl~~~~~s~~y~~e~g~~~~~l~ 182 (247)
....++.+.+...+.. ...-++.|.+.-|= .+|..+|..++.++..+.-. ...+..... ........+.+...
T Consensus 30 ~g~~~~~~~l~~~l~~----~~~vll~G~pGtGKT~la~~la~~~~~~~~~i~~~~~~~~~~l~g-~~~~~~~~~~~~~~ 104 (331)
T 2r44_A 30 VGQKYMINRLLIGICT----GGHILLEGVPGLAKTLSVNTLAKTMDLDFHRIQFTPDLLPSDLIG-TMIYNQHKGNFEVK 104 (331)
T ss_dssp CSCHHHHHHHHHHHHH----TCCEEEESCCCHHHHHHHHHHHHHTTCCEEEEECCTTCCHHHHHE-EEEEETTTTEEEEE
T ss_pred eCcHHHHHHHHHHHHc----CCeEEEECCCCCcHHHHHHHHHHHhCCCeEEEecCCCCChhhcCC-ceeecCCCCceEec
Confidence 3455555555544433 23457888887665 68889999999988765421 111111111 11111122334443
Q ss_pred ecccCCCCEEEEEecchh-hhHHHHHHHHHHHhC
Q 025851 183 VGAVQAGERALIVDDLVA-TGGTLSAAIRLLERV 215 (247)
Q Consensus 183 ~~~~~~GkrVLIVDDIlt-TG~Tl~aa~~lLk~a 215 (247)
.+.+. ..||++||+=. +..+.....+.+++.
T Consensus 105 ~g~l~--~~vl~iDEi~~~~~~~~~~Ll~~l~~~ 136 (331)
T 2r44_A 105 KGPVF--SNFILADEVNRSPAKVQSALLECMQEK 136 (331)
T ss_dssp ECTTC--SSEEEEETGGGSCHHHHHHHHHHHHHS
T ss_pred cCccc--ccEEEEEccccCCHHHHHHHHHHHhcC
Confidence 33332 36999999854 455666667777764
No 70
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=38.70 E-value=45 Score=29.98 Aligned_cols=48 Identities=13% Similarity=-0.026 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHHHhccCCccEEEecCCcchhHHHHHHHHhCCCeEEe
Q 025851 108 TKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPM 155 (247)
Q Consensus 108 p~~~~~l~~~La~~~~~~~iDvVVgve~rGf~lA~~LA~~Lg~p~v~i 155 (247)
.+....+...+.+.+...++|+|+........++...|..+++|++.+
T Consensus 76 ~~~~~~~~~~l~~~l~~~kPD~Vlv~gd~~~~~aalaA~~~~IPv~h~ 123 (385)
T 4hwg_A 76 AKSIGLVIEKVDEVLEKEKPDAVLFYGDTNSCLSAIAAKRRKIPIFHM 123 (385)
T ss_dssp HHHHHHHHHHHHHHHHHHCCSEEEEESCSGGGGGHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHHHHHHhcCCcEEEEECCchHHHHHHHHHHhCCCEEEE
Confidence 444555556666667777899999998776666666778889998754
No 71
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=38.22 E-value=52 Score=23.23 Aligned_cols=30 Identities=33% Similarity=0.395 Sum_probs=16.7
Q ss_pred CCCEEEEEecchhhhHHHHHHHHHHHhCCCeEE
Q 025851 188 AGERALIVDDLVATGGTLSAAIRLLERVGVHVV 220 (247)
Q Consensus 188 ~GkrVLIVDDIltTG~Tl~aa~~lLk~aGa~vV 220 (247)
.+.+||||||=-.....+ .+.|++.|..+.
T Consensus 5 ~~~~ilivdd~~~~~~~l---~~~L~~~g~~v~ 34 (132)
T 3lte_A 5 QSKRILVVDDDQAMAAAI---ERVLKRDHWQVE 34 (132)
T ss_dssp --CEEEEECSCHHHHHHH---HHHHHHTTCEEE
T ss_pred CCccEEEEECCHHHHHHH---HHHHHHCCcEEE
Confidence 457888888865544443 344455665543
No 72
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=38.21 E-value=69 Score=27.48 Aligned_cols=41 Identities=20% Similarity=0.134 Sum_probs=28.6
Q ss_pred HHHHHHHhccCCccEEEecCCcchhHHHHHHHHhCCCeEEee
Q 025851 115 IDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMR 156 (247)
Q Consensus 115 ~~~La~~~~~~~iDvVVgve~rGf~lA~~LA~~Lg~p~v~iR 156 (247)
...+.+.+...++|+|+. +......+..+|+.+|+|++...
T Consensus 91 ~~~l~~~l~~~~pD~Vi~-d~~~~~~~~~aA~~~giP~v~~~ 131 (402)
T 3ia7_A 91 LRAAEEALGDNPPDLVVY-DVFPFIAGRLLAARWDRPAVRLT 131 (402)
T ss_dssp HHHHHHHHTTCCCSEEEE-ESTTHHHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHHhccCCCEEEE-CchHHHHHHHHHHhhCCCEEEEe
Confidence 345555666678999987 42333457788999999988653
No 73
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=36.85 E-value=67 Score=27.96 Aligned_cols=41 Identities=17% Similarity=0.096 Sum_probs=28.2
Q ss_pred HHHHHHHhccCCccEEEecCCcchhHHHHHHHHhCCCeEEee
Q 025851 115 IDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMR 156 (247)
Q Consensus 115 ~~~La~~~~~~~iDvVVgve~rGf~lA~~LA~~Lg~p~v~iR 156 (247)
...+.+.+++.++|+|+. +.--...+..+|+.+|+|++..-
T Consensus 107 ~~~l~~~l~~~~PDlVi~-d~~~~~~~~~aA~~~giP~v~~~ 147 (415)
T 3rsc_A 107 LRATAEALDGDVPDLVLY-DDFPFIAGQLLAARWRRPAVRLS 147 (415)
T ss_dssp HHHHHHHHSSSCCSEEEE-ESTTHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHhccCCCEEEE-CchhhhHHHHHHHHhCCCEEEEE
Confidence 345555666778999994 52233446778999999988654
No 74
>2ji4_A Phosphoribosyl pyrophosphate synthetase-associated protein 2; phosphorylation, nucleotide biosynthesis, transferase; 2.55A {Homo sapiens} PDB: 2c4k_A*
Probab=35.89 E-value=1.2e+02 Score=27.59 Aligned_cols=71 Identities=10% Similarity=0.042 Sum_probs=42.4
Q ss_pred hhHHHH---HHHHhCCCeEEeeccCCCCCceeeeeeeeccccceeEEeecccCCCCEEEEEecchh-hhHH---HHHHHH
Q 025851 138 FIFGPP---IALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVA-TGGT---LSAAIR 210 (247)
Q Consensus 138 f~lA~~---LA~~Lg~p~v~iRK~~kl~~~~~s~~y~~e~g~~~~~l~~~~~~~GkrVLIVDDIlt-TG~T---l~aa~~ 210 (247)
-.+|.. +|..||+++..+..++ +..| ...++....++|+.|.||-.... .-.. +.-++.
T Consensus 39 ~~la~~~~~ia~~lg~~l~~~~~~~------------F~dG--E~~v~i~esvrg~dV~iiqs~~~~~nd~lmeLl~~id 104 (379)
T 2ji4_A 39 SSCMELSKKIAERLGVEMGKVQVYQ------------EPNR--ETRVQIQESVRGKDVFIIQTVSKDVNTTIMELLIMVY 104 (379)
T ss_dssp GGGGHHHHHHHHHHTCCCCCEEEEE------------CTTS--CEEEEECSCCTTCEEEEECCCCSCHHHHHHHHHHHHH
T ss_pred HHHHHhHHHHHHHhCCceEeeEEEE------------CCCC--CEEEEeCCCcCCCEEEEEeCCCCCccHHHHHHHHHHH
Confidence 466777 9999999875442211 1112 22333344568999999988653 2223 333455
Q ss_pred HHHhCCCeEEEE
Q 025851 211 LLERVGVHVVEC 222 (247)
Q Consensus 211 lLk~aGa~vV~v 222 (247)
.+++++|+.+.+
T Consensus 105 A~k~asA~rit~ 116 (379)
T 2ji4_A 105 ACKTSCAKSIIG 116 (379)
T ss_dssp HHHHTTCSEEEE
T ss_pred HHHhcCCceEEE
Confidence 677889987653
No 75
>3hix_A ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q8YQN0_anAsp, NSR437I, NESG, structural genomics, PSI-2, protein structure initiative; 1.92A {Anabaena SP} PDB: 3k9r_A
Probab=35.38 E-value=37 Score=24.34 Aligned_cols=33 Identities=18% Similarity=0.267 Sum_probs=26.8
Q ss_pred cCCCCEEEEEecchhhhHHHHHHHHHHHhCCCeEEE
Q 025851 186 VQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVE 221 (247)
Q Consensus 186 ~~~GkrVLIVDDIltTG~Tl~aa~~lLk~aGa~vV~ 221 (247)
+.+++.|+++++ +|.....++..|++.|-+.|.
T Consensus 49 l~~~~~ivvyc~---~g~rs~~a~~~L~~~G~~~v~ 81 (106)
T 3hix_A 49 LEKSRDIYVYGA---GDEQTSQAVNLLRSAGFEHVS 81 (106)
T ss_dssp SCTTSCEEEECS---SHHHHHHHHHHHHHTTCSCEE
T ss_pred CCCCCeEEEEEC---CCChHHHHHHHHHHcCCcCEE
Confidence 456788999986 788899999999999987443
No 76
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=34.08 E-value=42 Score=24.66 Aligned_cols=43 Identities=12% Similarity=0.081 Sum_probs=36.0
Q ss_pred ccCCCCEEEEEecchhhhHHHHHHHHHHHhCCCeEEEEEEEEe
Q 025851 185 AVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIE 227 (247)
Q Consensus 185 ~~~~GkrVLIVDDIltTG~Tl~aa~~lLk~aGa~vV~v~vlv~ 227 (247)
.+..|+.|+=|++.-..|-|-.++.++|++......-.+.+++
T Consensus 46 ~L~vGD~I~~VNG~~v~g~~h~evv~lLk~~~~g~~~~L~lv~ 88 (95)
T 3gge_A 46 TICVGDHIESINGENIVGWRHYDVAKKLKELKKEELFTMKLIE 88 (95)
T ss_dssp TCCTTCEEEEETTEECTTCCHHHHHHHHHHSCTTCEEEEEEEE
T ss_pred CCCCCCEEEEECCEEccCCCHHHHHHHHHhCCCCCEEEEEEEC
Confidence 4679999999999999999999999999997655445555654
No 77
>3mm4_A Histidine kinase homolog; receiver domain, CKI1, cytokinin signaling, ROS fold, CHEY-like, transferase; 2.00A {Arabidopsis thaliana} PDB: 3mmn_A
Probab=33.71 E-value=66 Score=25.49 Aligned_cols=28 Identities=36% Similarity=0.528 Sum_probs=18.8
Q ss_pred CCCCEEEEEecchhhhHHHHHHHHHHHhCCC
Q 025851 187 QAGERALIVDDLVATGGTLSAAIRLLERVGV 217 (247)
Q Consensus 187 ~~GkrVLIVDDIltTG~Tl~aa~~lLk~aGa 217 (247)
..+.+||||||=-..-. ...++|++.|.
T Consensus 59 ~~~~~ILiVdDd~~~~~---~l~~~L~~~g~ 86 (206)
T 3mm4_A 59 LRGKRVLVVDDNFISRK---VATGKLKKMGV 86 (206)
T ss_dssp TTTCEEEEECSCHHHHH---HHHHHHHHTTC
T ss_pred cCCCEEEEEeCCHHHHH---HHHHHHHHcCC
Confidence 46789999999655443 34455566665
No 78
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=33.11 E-value=65 Score=23.77 Aligned_cols=29 Identities=24% Similarity=0.328 Sum_probs=17.4
Q ss_pred CCCEEEEEecchhhhHHHHHHHHHHHhCCCeE
Q 025851 188 AGERALIVDDLVATGGTLSAAIRLLERVGVHV 219 (247)
Q Consensus 188 ~GkrVLIVDDIltTG~Tl~aa~~lLk~aGa~v 219 (247)
++.+||||||=-..... ..+.|++.|..+
T Consensus 6 ~~~~ILivdd~~~~~~~---l~~~L~~~g~~v 34 (154)
T 3gt7_A 6 RAGEILIVEDSPTQAEH---LKHILEETGYQT 34 (154)
T ss_dssp -CCEEEEECSCHHHHHH---HHHHHHTTTCEE
T ss_pred CCCcEEEEeCCHHHHHH---HHHHHHHCCCEE
Confidence 45789999986554443 344555666554
No 79
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=31.63 E-value=59 Score=23.75 Aligned_cols=29 Identities=38% Similarity=0.433 Sum_probs=14.5
Q ss_pred CCCEEEEEecchhhhHHHHHHHHHHHhCCCeE
Q 025851 188 AGERALIVDDLVATGGTLSAAIRLLERVGVHV 219 (247)
Q Consensus 188 ~GkrVLIVDDIltTG~Tl~aa~~lLk~aGa~v 219 (247)
++.+||||||=-..... ..++|++.|..+
T Consensus 13 ~~~~iLivdd~~~~~~~---l~~~L~~~g~~v 41 (143)
T 3m6m_D 13 RSMRMLVADDHEANRMV---LQRLLEKAGHKV 41 (143)
T ss_dssp --CEEEEECSSHHHHHH---HHHHHHC--CEE
T ss_pred ccceEEEEeCCHHHHHH---HHHHHHHcCCeE
Confidence 45688888886544333 334455555544
No 80
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=31.51 E-value=85 Score=22.55 Aligned_cols=29 Identities=31% Similarity=0.263 Sum_probs=17.3
Q ss_pred CCEEEEEecchhhhHHHHHHHHHHHhCCCeEE
Q 025851 189 GERALIVDDLVATGGTLSAAIRLLERVGVHVV 220 (247)
Q Consensus 189 GkrVLIVDDIltTG~Tl~aa~~lLk~aGa~vV 220 (247)
..+||||||=-.....+ ..+|++.|..+.
T Consensus 4 ~~~iLivdd~~~~~~~l---~~~L~~~g~~v~ 32 (136)
T 3t6k_A 4 PHTLLIVDDDDTVAEML---ELVLRGAGYEVR 32 (136)
T ss_dssp CCEEEEECSCHHHHHHH---HHHHHHTTCEEE
T ss_pred CCEEEEEeCCHHHHHHH---HHHHHHCCCEEE
Confidence 46788998865544443 344555665543
No 81
>3ilm_A ALR3790 protein; rhodanese-like, NSR437H, NESG, structural genomics, protein structure initiative, northeast structural genomics consortium; 2.26A {Nostoc SP} PDB: 2kl3_A
Probab=31.47 E-value=48 Score=25.30 Aligned_cols=33 Identities=18% Similarity=0.267 Sum_probs=27.1
Q ss_pred cCCCCEEEEEecchhhhHHHHHHHHHHHhCCCeEEE
Q 025851 186 VQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVE 221 (247)
Q Consensus 186 ~~~GkrVLIVDDIltTG~Tl~aa~~lLk~aGa~vV~ 221 (247)
+.+++.|+++++ +|.....++..|++.|-+.|.
T Consensus 53 l~~~~~ivvyC~---~g~rs~~aa~~L~~~G~~~v~ 85 (141)
T 3ilm_A 53 LEKSRDIYVYGA---GDEQTSQAVNLLRSAGFEHVS 85 (141)
T ss_dssp SCTTSEEEEECS---SHHHHHHHHHHHHHTTCCSEE
T ss_pred CCCCCeEEEEEC---CChHHHHHHHHHHHcCCCCEE
Confidence 457788999987 788889999999999986443
No 82
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=31.23 E-value=76 Score=23.48 Aligned_cols=30 Identities=27% Similarity=0.385 Sum_probs=20.2
Q ss_pred CCCEEEEEecchhhhHHHHHHHHHHHhCCCeEE
Q 025851 188 AGERALIVDDLVATGGTLSAAIRLLERVGVHVV 220 (247)
Q Consensus 188 ~GkrVLIVDDIltTG~Tl~aa~~lLk~aGa~vV 220 (247)
...+||||||=-.. .....++|++.|..++
T Consensus 35 ~~~~Ilivdd~~~~---~~~l~~~L~~~g~~v~ 64 (157)
T 3hzh_A 35 IPFNVLIVDDSVFT---VKQLTQIFTSEGFNII 64 (157)
T ss_dssp EECEEEEECSCHHH---HHHHHHHHHHTTCEEE
T ss_pred CceEEEEEeCCHHH---HHHHHHHHHhCCCeEE
Confidence 34689999996544 4444556677787765
No 83
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=31.07 E-value=56 Score=23.67 Aligned_cols=32 Identities=22% Similarity=0.234 Sum_probs=21.3
Q ss_pred CCCCEEEEEecchhhhHHHHHHHHHHHhCC-CeEEE
Q 025851 187 QAGERALIVDDLVATGGTLSAAIRLLERVG-VHVVE 221 (247)
Q Consensus 187 ~~GkrVLIVDDIltTG~Tl~aa~~lLk~aG-a~vV~ 221 (247)
.++.+||||||=-.....+ .++|++.| ..++.
T Consensus 18 ~~~~~ilivdd~~~~~~~l---~~~L~~~g~~~v~~ 50 (146)
T 4dad_A 18 QGMINILVASEDASRLAHL---ARLVGDAGRYRVTR 50 (146)
T ss_dssp GGGCEEEEECSCHHHHHHH---HHHHHHHCSCEEEE
T ss_pred CCCCeEEEEeCCHHHHHHH---HHHHhhCCCeEEEE
Confidence 4678999999976555444 45566667 55543
No 84
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=30.95 E-value=87 Score=22.30 Aligned_cols=29 Identities=28% Similarity=0.283 Sum_probs=17.9
Q ss_pred CCCEEEEEecchhhhHHHHHHHHHHHhCCCeE
Q 025851 188 AGERALIVDDLVATGGTLSAAIRLLERVGVHV 219 (247)
Q Consensus 188 ~GkrVLIVDDIltTG~Tl~aa~~lLk~aGa~v 219 (247)
...+||||||=-.....+ .+.|++.|..+
T Consensus 5 ~~~~iLivdd~~~~~~~l---~~~l~~~g~~v 33 (140)
T 3grc_A 5 PRPRILICEDDPDIARLL---NLMLEKGGFDS 33 (140)
T ss_dssp CCSEEEEECSCHHHHHHH---HHHHHHTTCEE
T ss_pred CCCCEEEEcCCHHHHHHH---HHHHHHCCCeE
Confidence 356899999865544443 44555666653
No 85
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=30.74 E-value=76 Score=22.50 Aligned_cols=30 Identities=33% Similarity=0.419 Sum_probs=18.4
Q ss_pred CCCEEEEEecchhhhHHHHHHHHHHHhCCCeEE
Q 025851 188 AGERALIVDDLVATGGTLSAAIRLLERVGVHVV 220 (247)
Q Consensus 188 ~GkrVLIVDDIltTG~Tl~aa~~lLk~aGa~vV 220 (247)
...+||||||=-.....+ .+.|++.|.+++
T Consensus 6 ~~~~ilivdd~~~~~~~l---~~~L~~~g~~v~ 35 (136)
T 3hdv_A 6 ARPLVLVVDDNAVNREAL---ILYLKSRGIDAV 35 (136)
T ss_dssp -CCEEEEECSCHHHHHHH---HHHHHHTTCCEE
T ss_pred CCCeEEEECCCHHHHHHH---HHHHHHcCceEE
Confidence 457899999866554444 444555666554
No 86
>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A
Probab=30.42 E-value=72 Score=21.57 Aligned_cols=32 Identities=19% Similarity=0.279 Sum_probs=26.4
Q ss_pred CCCCEEEEEecchhhhHHHHHHHHHHHhCCCeEEE
Q 025851 187 QAGERALIVDDLVATGGTLSAAIRLLERVGVHVVE 221 (247)
Q Consensus 187 ~~GkrVLIVDDIltTG~Tl~aa~~lLk~aGa~vV~ 221 (247)
.+++.|+++.+ +|.....++..|++.|-+.+.
T Consensus 39 ~~~~~ivv~C~---~g~rs~~aa~~L~~~G~~~v~ 70 (85)
T 2jtq_A 39 DKNDTVKVYCN---AGRQSGQAKEILSEMGYTHVE 70 (85)
T ss_dssp CTTSEEEEEES---SSHHHHHHHHHHHHTTCSSEE
T ss_pred CCCCcEEEEcC---CCchHHHHHHHHHHcCCCCEE
Confidence 57789999985 688888999999999987554
No 87
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=29.92 E-value=41 Score=24.51 Aligned_cols=37 Identities=14% Similarity=0.238 Sum_probs=32.2
Q ss_pred cCCCCEEEEEecchhhhHHHHHHHHHHHhCC---CeEEEE
Q 025851 186 VQAGERALIVDDLVATGGTLSAAIRLLERVG---VHVVEC 222 (247)
Q Consensus 186 ~~~GkrVLIVDDIltTG~Tl~aa~~lLk~aG---a~vV~v 222 (247)
+..|++|+=||+.-.++.|...+.++|+.++ ...+.+
T Consensus 60 l~~GD~Il~Vng~~~~~~~~~~~~~~l~~~~~r~~~~~~l 99 (109)
T 1wi4_A 60 LKPGDQLVSINKESMIGVSFEEAKSIITRAKLRSESPWEI 99 (109)
T ss_dssp CCTTCBEEEETTSCCTTCCHHHHHHHHHHSCCSSSSCEEE
T ss_pred CCCCCEEEEECCEECCCCCHHHHHHHHHccccCCCceEEE
Confidence 7899999999999999999999999999987 554443
No 88
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=29.70 E-value=1e+02 Score=26.96 Aligned_cols=40 Identities=15% Similarity=0.109 Sum_probs=27.9
Q ss_pred HHHHHHHhccCCccEEEecCCcchhHHHHHHHHhCCCeEEee
Q 025851 115 IDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMR 156 (247)
Q Consensus 115 ~~~La~~~~~~~iDvVVgve~rGf~lA~~LA~~Lg~p~v~iR 156 (247)
...+.+.+++.++|+|++-. .+ ..+..+|+.+|+|.+..-
T Consensus 93 ~~~l~~~l~~~~pD~Vi~d~-~~-~~~~~~A~~~giP~v~~~ 132 (430)
T 2iyf_A 93 LPQLADAYADDIPDLVLHDI-TS-YPARVLARRWGVPAVSLS 132 (430)
T ss_dssp HHHHHHHHTTSCCSEEEEET-TC-HHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHhhccCCCEEEECC-cc-HHHHHHHHHcCCCEEEEe
Confidence 34455556667899998643 33 467788999999987653
No 89
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=29.49 E-value=91 Score=21.81 Aligned_cols=29 Identities=28% Similarity=0.456 Sum_probs=25.3
Q ss_pred cCCCCEEEEEecchhhhHHHHHHHHHHHhCCC
Q 025851 186 VQAGERALIVDDLVATGGTLSAAIRLLERVGV 217 (247)
Q Consensus 186 ~~~GkrVLIVDDIltTG~Tl~aa~~lLk~aGa 217 (247)
+.+++.|++++ .+|.....++..|++.|.
T Consensus 53 l~~~~~ivvyC---~~g~rs~~a~~~L~~~G~ 81 (100)
T 3foj_A 53 FNDNETYYIIC---KAGGRSAQVVQYLEQNGV 81 (100)
T ss_dssp SCTTSEEEEEC---SSSHHHHHHHHHHHTTTC
T ss_pred CCCCCcEEEEc---CCCchHHHHHHHHHHCCC
Confidence 45788999987 688999999999999998
No 90
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=28.33 E-value=1.1e+02 Score=26.88 Aligned_cols=41 Identities=15% Similarity=0.154 Sum_probs=28.4
Q ss_pred HHHHHHHHhccCCccEEEecCCcchhHHHHHHHHhCCCeEEee
Q 025851 114 TIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMR 156 (247)
Q Consensus 114 l~~~La~~~~~~~iDvVVgve~rGf~lA~~LA~~Lg~p~v~iR 156 (247)
..+.+.+.+++.++|+||+-.. +..+..+|+.+|+|.+.+.
T Consensus 97 ~~~~l~~~l~~~~pD~VI~d~~--~~~~~~~A~~lgIP~v~~~ 137 (424)
T 2iya_A 97 VLPQLEDAYADDRPDLIVYDIA--SWPAPVLGRKWDIPFVQLS 137 (424)
T ss_dssp HHHHHHHHTTTSCCSEEEEETT--CTHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHHHhccCCCEEEEcCc--ccHHHHHHHhcCCCEEEEe
Confidence 3344555555668999987542 3467889999999987653
No 91
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=28.27 E-value=71 Score=22.34 Aligned_cols=27 Identities=41% Similarity=0.539 Sum_probs=14.6
Q ss_pred CCEEEEEecchhhhHHHHHHHHHHHhCCCe
Q 025851 189 GERALIVDDLVATGGTLSAAIRLLERVGVH 218 (247)
Q Consensus 189 GkrVLIVDDIltTG~Tl~aa~~lLk~aGa~ 218 (247)
..+||||||=-.....+ .+.|++.|..
T Consensus 3 ~~~ilivdd~~~~~~~l---~~~L~~~g~~ 29 (127)
T 3i42_A 3 LQQALIVEDYQAAAETF---KELLEMLGFQ 29 (127)
T ss_dssp CEEEEEECSCHHHHHHH---HHHHHHTTEE
T ss_pred cceEEEEcCCHHHHHHH---HHHHHHcCCC
Confidence 35788888755444333 3344455543
No 92
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=27.62 E-value=50 Score=24.77 Aligned_cols=38 Identities=21% Similarity=0.188 Sum_probs=33.0
Q ss_pred ccCCCCEEEEEecchhhhHHHHHHHHHHHhCCCeEEEE
Q 025851 185 AVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVEC 222 (247)
Q Consensus 185 ~~~~GkrVLIVDDIltTG~Tl~aa~~lLk~aGa~vV~v 222 (247)
.+..|++|+=|++.-.++-|...+.++|+..+...+..
T Consensus 75 gL~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~v~l 112 (130)
T 1i16_A 75 TVQPGDEILQLGGTAMQGLTRFEAWNIIKALPDGPVTI 112 (130)
T ss_dssp CCCTTCCEEECSSCBGGGSCHHHHHHHHHTSCSSEEEE
T ss_pred CCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCceEEE
Confidence 46789999999999999999999999999997765543
No 93
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=27.37 E-value=1.2e+02 Score=26.47 Aligned_cols=36 Identities=17% Similarity=-0.022 Sum_probs=22.9
Q ss_pred HHhccCCccEEEecCCcchhHHHHHHHHhCCCeEEe
Q 025851 120 ERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPM 155 (247)
Q Consensus 120 ~~~~~~~iDvVVgve~rGf~lA~~LA~~Lg~p~v~i 155 (247)
..+++.++|+|++.-.---..+...|+.+++|++..
T Consensus 86 ~~l~~~~PDvVi~~g~~~s~p~~laA~~~~iP~vih 121 (365)
T 3s2u_A 86 RVIRQLRPVCVLGLGGYVTGPGGLAARLNGVPLVIH 121 (365)
T ss_dssp HHHHHHCCSEEEECSSSTHHHHHHHHHHTTCCEEEE
T ss_pred HHHHhcCCCEEEEcCCcchHHHHHHHHHcCCCEEEE
Confidence 345556899999864222233445578889998853
No 94
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=26.97 E-value=69 Score=22.68 Aligned_cols=27 Identities=26% Similarity=0.377 Sum_probs=16.0
Q ss_pred CCEEEEEecchhhhHHHHHHHHHHHhCCCe
Q 025851 189 GERALIVDDLVATGGTLSAAIRLLERVGVH 218 (247)
Q Consensus 189 GkrVLIVDDIltTG~Tl~aa~~lLk~aGa~ 218 (247)
+.+||||||=-.....+ .+.|++.|..
T Consensus 5 ~~~iLivdd~~~~~~~l---~~~L~~~g~~ 31 (129)
T 3h1g_A 5 SMKLLVVDDSSTMRRII---KNTLSRLGYE 31 (129)
T ss_dssp -CCEEEECSCHHHHHHH---HHHHHHTTCC
T ss_pred CcEEEEEeCCHHHHHHH---HHHHHHcCCc
Confidence 46789999865544444 3445566654
No 95
>2b4a_A BH3024; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.42A {Bacillus halodurans} SCOP: c.23.1.1
Probab=26.66 E-value=1.2e+02 Score=21.56 Aligned_cols=30 Identities=20% Similarity=0.254 Sum_probs=19.3
Q ss_pred CCCCEEEEEecchhhhHHHHHHHHHHHhCCCeE
Q 025851 187 QAGERALIVDDLVATGGTLSAAIRLLERVGVHV 219 (247)
Q Consensus 187 ~~GkrVLIVDDIltTG~Tl~aa~~lLk~aGa~v 219 (247)
.++.+||||||=-.....+. +.|++.|..+
T Consensus 13 ~~~~~ilivdd~~~~~~~l~---~~L~~~g~~v 42 (138)
T 2b4a_A 13 MQPFRVTLVEDEPSHATLIQ---YHLNQLGAEV 42 (138)
T ss_dssp -CCCEEEEECSCHHHHHHHH---HHHHHTTCEE
T ss_pred CCCCeEEEECCCHHHHHHHH---HHHHHcCCEE
Confidence 46789999999766555444 4455566543
No 96
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=26.35 E-value=70 Score=23.34 Aligned_cols=27 Identities=22% Similarity=0.211 Sum_probs=16.6
Q ss_pred CCCCEEEEEecchhhhHHHHHHHHHHHhCC
Q 025851 187 QAGERALIVDDLVATGGTLSAAIRLLERVG 216 (247)
Q Consensus 187 ~~GkrVLIVDDIltTG~Tl~aa~~lLk~aG 216 (247)
.++.+||||||=-..... ..++|++.|
T Consensus 13 ~~~~~iLivdd~~~~~~~---l~~~L~~~~ 39 (152)
T 3eul_A 13 PEKVRVVVGDDHPLFREG---VVRALSLSG 39 (152)
T ss_dssp -CCEEEEEECSSHHHHHH---HHHHHHHHS
T ss_pred CceEEEEEEcCCHHHHHH---HHHHHhhCC
Confidence 467889999986544433 344455555
No 97
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=26.23 E-value=79 Score=22.59 Aligned_cols=30 Identities=20% Similarity=0.238 Sum_probs=18.7
Q ss_pred CCCEEEEEecchhhhHHHHHHHHHHHhCCCeEE
Q 025851 188 AGERALIVDDLVATGGTLSAAIRLLERVGVHVV 220 (247)
Q Consensus 188 ~GkrVLIVDDIltTG~Tl~aa~~lLk~aGa~vV 220 (247)
...+||||||=-.....+ .++|++.|.++.
T Consensus 5 ~~~~ilivdd~~~~~~~l---~~~L~~~g~~v~ 34 (136)
T 3kto_A 5 HHPIIYLVDHQKDARAAL---SKLLSPLDVTIQ 34 (136)
T ss_dssp --CEEEEECSCHHHHHHH---HHHHTTSSSEEE
T ss_pred CCCeEEEEcCCHHHHHHH---HHHHHHCCcEEE
Confidence 346899999966554444 455666776654
No 98
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=25.93 E-value=74 Score=28.30 Aligned_cols=32 Identities=13% Similarity=0.009 Sum_probs=24.3
Q ss_pred hccCCccEEEecCCcchhHHHHHHHHhCCCeEEe
Q 025851 122 YKDKNISVVAGIEARGFIFGPPIALAIGAKFVPM 155 (247)
Q Consensus 122 ~~~~~iDvVVgve~rGf~lA~~LA~~Lg~p~v~i 155 (247)
+++.++|+|++-. ++..+..+|+.+|+|++..
T Consensus 140 ~~~~~pDlVv~d~--~~~~~~~aA~~lgiP~v~~ 171 (441)
T 2yjn_A 140 CRKWRPDLVIWEP--LTFAAPIAAAVTGTPHARL 171 (441)
T ss_dssp HHHHCCSEEEECT--TCTHHHHHHHHHTCCEEEE
T ss_pred HHhcCCCEEEecC--cchhHHHHHHHcCCCEEEE
Confidence 3445799998764 3467788999999998765
No 99
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=25.73 E-value=96 Score=26.78 Aligned_cols=38 Identities=13% Similarity=-0.092 Sum_probs=25.9
Q ss_pred HHHHHHhccCCccEEEecCCcchhHHHHHHHHhCCCeEEe
Q 025851 116 DLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPM 155 (247)
Q Consensus 116 ~~La~~~~~~~iDvVVgve~rGf~lA~~LA~~Lg~p~v~i 155 (247)
..+.+.++..++|+|++-. .+..+..+|+.+|+|++..
T Consensus 120 ~~l~~~l~~~~pDvVv~~~--~~~~~~~aa~~~giP~v~~ 157 (412)
T 3otg_A 120 DELQPVIERLRPDLVVQEI--SNYGAGLAALKAGIPTICH 157 (412)
T ss_dssp HHHHHHHHHHCCSEEEEET--TCHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHhcCCCEEEECc--hhhHHHHHHHHcCCCEEEe
Confidence 3444445556899998852 3344677888999998764
No 100
>2ayx_A Sensor kinase protein RCSC; two independent structural domains, transferase; NMR {Escherichia coli} SCOP: c.23.1.1 c.23.1.6 PDB: 2ayz_A 2ayy_A
Probab=25.24 E-value=46 Score=27.51 Aligned_cols=33 Identities=18% Similarity=0.144 Sum_probs=23.6
Q ss_pred cCCCCEEEEEecchhhhHHHHHHHHHHHhCCCeEEE
Q 025851 186 VQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVE 221 (247)
Q Consensus 186 ~~~GkrVLIVDDIltTG~Tl~aa~~lLk~aGa~vV~ 221 (247)
...|++||||||=-+... ...+.|...|.++..
T Consensus 8 ~l~~~~vlvv~d~~~~~~---~l~~~L~~~g~~v~~ 40 (254)
T 2ayx_A 8 GLSGKRCWLAVRNASLCQ---FLETSLQRSGIVVTT 40 (254)
T ss_dssp TTTTEEEEEECCCHHHHH---HHHHHHTTTTEEEEE
T ss_pred ccCCCEEEEEcCCHHHHH---HHHHHHHHCCCEEEE
Confidence 368999999999755544 445567777887754
No 101
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=25.14 E-value=1e+02 Score=26.74 Aligned_cols=37 Identities=14% Similarity=0.113 Sum_probs=25.1
Q ss_pred HHHHHhccCCccEEEecCCcchhHHHHHHHHhCCCeEEe
Q 025851 117 LFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPM 155 (247)
Q Consensus 117 ~La~~~~~~~iDvVVgve~rGf~lA~~LA~~Lg~p~v~i 155 (247)
.+.+.+++.++|+|++-. ....+..+|+.+|+|++..
T Consensus 114 ~l~~~~~~~~pDlVv~d~--~~~~~~~~a~~~giP~v~~ 150 (398)
T 4fzr_A 114 EALALAERWKPDLVLTET--YSLTGPLVAATLGIPWIEQ 150 (398)
T ss_dssp HHHHHHHHHCCSEEEEET--TCTHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHhCCCCEEEECc--cccHHHHHHHhhCCCEEEe
Confidence 444445556799998643 2344677888999998754
No 102
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=25.08 E-value=1.2e+02 Score=20.66 Aligned_cols=29 Identities=34% Similarity=0.527 Sum_probs=17.7
Q ss_pred CCEEEEEecchhhhHHHHHHHHHHHhCCCeEE
Q 025851 189 GERALIVDDLVATGGTLSAAIRLLERVGVHVV 220 (247)
Q Consensus 189 GkrVLIVDDIltTG~Tl~aa~~lLk~aGa~vV 220 (247)
+.+|+||||=-.....+. +.|++.|..++
T Consensus 2 ~~~ilivdd~~~~~~~l~---~~l~~~g~~vv 30 (120)
T 1tmy_A 2 GKRVLIVDDAAFMRMMLK---DIITKAGYEVA 30 (120)
T ss_dssp CCEEEEECSCHHHHHHHH---HHHHHTTCEEE
T ss_pred CceEEEEcCcHHHHHHHH---HHHhhcCcEEE
Confidence 357899988655554444 34456676643
No 103
>3snk_A Response regulator CHEY-like protein; P-loop containing nucleoside triphosphate hydrolases, struct genomics; 2.02A {Mesorhizobium loti}
Probab=24.75 E-value=87 Score=22.26 Aligned_cols=30 Identities=7% Similarity=0.018 Sum_probs=19.6
Q ss_pred CCCEEEEEecchhhhHHHHHHHHHHHhCC-CeEE
Q 025851 188 AGERALIVDDLVATGGTLSAAIRLLERVG-VHVV 220 (247)
Q Consensus 188 ~GkrVLIVDDIltTG~Tl~aa~~lLk~aG-a~vV 220 (247)
...+||||||=-.....+ .+.|++.| ..+.
T Consensus 13 ~~~~ilivdd~~~~~~~l---~~~L~~~g~~~v~ 43 (135)
T 3snk_A 13 KRKQVALFSSDPNFKRDV---ATRLDALAIYDVR 43 (135)
T ss_dssp CCEEEEEECSCHHHHHHH---HHHHHHTSSEEEE
T ss_pred CCcEEEEEcCCHHHHHHH---HHHHhhcCCeEEE
Confidence 456899999976555444 45566777 5443
No 104
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=24.70 E-value=78 Score=21.83 Aligned_cols=34 Identities=21% Similarity=0.349 Sum_probs=31.0
Q ss_pred cCCCCEEEEEecchhhhHHHHHHHHHHHhCCCeE
Q 025851 186 VQAGERALIVDDLVATGGTLSAAIRLLERVGVHV 219 (247)
Q Consensus 186 ~~~GkrVLIVDDIltTG~Tl~aa~~lLk~aGa~v 219 (247)
+..|+.|+=|++.-.+|.|...+.+++++.+..+
T Consensus 40 L~~GD~Il~ing~~v~~~~~~~~~~~i~~~~~~v 73 (88)
T 3e17_A 40 LHEGDIILKINGTVTENMSLTDARKLIEKSRGKL 73 (88)
T ss_dssp CCTTCEEEEETTEECTTCCHHHHHHHHHHTTTEE
T ss_pred CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeE
Confidence 7789999999999999999999999999988753
No 105
>3lrt_A Ribose-phosphate pyrophosphokinase; phosphoribosyl transferase, ATP analog binding, ATP-binding, metal-binding, nucleotide biosynthesis; HET: ADP; 1.53A {Thermoplasma volcanium} PDB: 3lpn_A* 3nag_A* 3mbi_A*
Probab=24.59 E-value=1.3e+02 Score=26.12 Aligned_cols=69 Identities=9% Similarity=-0.042 Sum_probs=39.4
Q ss_pred hhHHHHHHHHhCCCeEEeeccCCCCCceeeeeeeeccccceeEEeecccCCCCEEEEEecchhh-hHH---HHHHHHHHH
Q 025851 138 FIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVAT-GGT---LSAAIRLLE 213 (247)
Q Consensus 138 f~lA~~LA~~Lg~p~v~iRK~~kl~~~~~s~~y~~e~g~~~~~l~~~~~~~GkrVLIVDDIltT-G~T---l~aa~~lLk 213 (247)
-.+|..+|..||+++..+..++- ..|+-.+++ ... |+.|.||--.... -.. +.-+++.++
T Consensus 10 ~~la~~ia~~lg~~l~~~~~~~F------------~dGE~~v~i--~e~--g~dV~iiqs~~~p~nd~lmeLl~~ida~k 73 (286)
T 3lrt_A 10 LKLAARIAEELKTEPVMPDERRF------------PDGELYLRY--DED--LTGHNIFIIGNTHSDAEVMEMILTLSAIQ 73 (286)
T ss_dssp HHHHHHHHHHTTSCEECCEEEEC------------TTSCEEEEC--CSC--CTTSEEEEECCCCSHHHHHHHHHHHHHGG
T ss_pred HHHHHHHHHHhCCCeeeeEEEEC------------CCCCEEEEE--cCC--CCcEEEEEeCCCCCcHHHHHHHHHHHHHH
Confidence 47899999999999865432211 112222222 222 8888888654321 122 334566677
Q ss_pred hCCCeEEEE
Q 025851 214 RVGVHVVEC 222 (247)
Q Consensus 214 ~aGa~vV~v 222 (247)
++||+.+.+
T Consensus 74 ~~~A~~it~ 82 (286)
T 3lrt_A 74 DYRTKSVNI 82 (286)
T ss_dssp GSCCSEEEE
T ss_pred HcCCCEEEE
Confidence 889886543
No 106
>3kyj_B CHEY6 protein, putative histidine protein kinase; protein-protein interaction, histidine kinase, response regulator, phosphorylation; 1.40A {Rhodobacter sphaeroides} PDB: 3kyi_B*
Probab=24.53 E-value=73 Score=23.04 Aligned_cols=26 Identities=15% Similarity=0.151 Sum_probs=14.3
Q ss_pred CCCCEEEEEecchhhhHHHHHHHHHHHhC
Q 025851 187 QAGERALIVDDLVATGGTLSAAIRLLERV 215 (247)
Q Consensus 187 ~~GkrVLIVDDIltTG~Tl~aa~~lLk~a 215 (247)
.++.+||||||=-..-. ...++|++.
T Consensus 11 ~~~~~vlivdd~~~~~~---~l~~~L~~~ 36 (145)
T 3kyj_B 11 GSPYNVMIVDDAAMMRL---YIASFIKTL 36 (145)
T ss_dssp CCSEEEEEECSCHHHHH---HHHHHHTTC
T ss_pred CCCCeEEEEcCCHHHHH---HHHHHHHhC
Confidence 35667888888544333 333444444
No 107
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=24.32 E-value=1.2e+02 Score=23.27 Aligned_cols=30 Identities=40% Similarity=0.494 Sum_probs=17.7
Q ss_pred CCCEEEEEecchhhhHHHHHHHHHHHhCCCeEE
Q 025851 188 AGERALIVDDLVATGGTLSAAIRLLERVGVHVV 220 (247)
Q Consensus 188 ~GkrVLIVDDIltTG~Tl~aa~~lLk~aGa~vV 220 (247)
.+.+||||||=-.....+. .+|++.|..+.
T Consensus 6 ~~~~iLivdd~~~~~~~l~---~~L~~~g~~v~ 35 (184)
T 3rqi_A 6 SDKNFLVIDDNEVFAGTLA---RGLERRGYAVR 35 (184)
T ss_dssp -CCEEEEECSCHHHHHHHH---HHHHHTTCEEE
T ss_pred CCCeEEEEcCCHHHHHHHH---HHHHHCCCEEE
Confidence 4578999998665544443 44455565543
No 108
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=24.08 E-value=1.1e+02 Score=26.22 Aligned_cols=37 Identities=14% Similarity=0.182 Sum_probs=25.2
Q ss_pred HHHHHhccCCccEEEecCCcchhHHHHHHHHhCCCeEEe
Q 025851 117 LFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPM 155 (247)
Q Consensus 117 ~La~~~~~~~iDvVVgve~rGf~lA~~LA~~Lg~p~v~i 155 (247)
.+.+.+++.++|+|++-.. ...+..+|+.+|+|++..
T Consensus 98 ~l~~~l~~~~pD~Vi~~~~--~~~~~~~a~~~giP~v~~ 134 (384)
T 2p6p_A 98 RMLDFSRAWRPDLIVGGTM--SYVAPLLALHLGVPHARQ 134 (384)
T ss_dssp HHHHHHHHHCCSEEEEETT--CTHHHHHHHHHTCCEEEE
T ss_pred HHHHHHhccCCcEEEECcc--hhhHHHHHHhcCCCEEEe
Confidence 3334444557999997432 345677899999998765
No 109
>3gk5_A Uncharacterized rhodanese-related protein TVG0868615; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Thermoplasma volcanium GSS1}
Probab=23.82 E-value=88 Score=22.37 Aligned_cols=29 Identities=21% Similarity=0.468 Sum_probs=25.1
Q ss_pred cCCCCEEEEEecchhhhHHHHHHHHHHHhCCC
Q 025851 186 VQAGERALIVDDLVATGGTLSAAIRLLERVGV 217 (247)
Q Consensus 186 ~~~GkrVLIVDDIltTG~Tl~aa~~lLk~aGa 217 (247)
+.+++.|++++ .+|.....++..|++.|.
T Consensus 52 l~~~~~ivvyC---~~G~rs~~aa~~L~~~G~ 80 (108)
T 3gk5_A 52 LERDKKYAVIC---AHGNRSAAAVEFLSQLGL 80 (108)
T ss_dssp SCTTSCEEEEC---SSSHHHHHHHHHHHTTTC
T ss_pred CCCCCeEEEEc---CCCcHHHHHHHHHHHcCC
Confidence 45788899998 688888999999999998
No 110
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=23.59 E-value=1.1e+02 Score=21.84 Aligned_cols=36 Identities=22% Similarity=0.407 Sum_probs=31.3
Q ss_pred cCCCCEEEEEecchhhhHHHHHHHHHHHhCCCeEEE
Q 025851 186 VQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVE 221 (247)
Q Consensus 186 ~~~GkrVLIVDDIltTG~Tl~aa~~lLk~aGa~vV~ 221 (247)
+..|++|+=||+.-.++.|...+.++++..+...+.
T Consensus 63 L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~v~ 98 (108)
T 2d92_A 63 LLPGDRLVSVNEYCLDNTSLAEAVEILKAVPPGLVH 98 (108)
T ss_dssp CCTTCEEEEESSCBCTTCCHHHHHHHHHHSCSEEEE
T ss_pred CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCeEE
Confidence 789999999999999999999999999997655443
No 111
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=23.47 E-value=97 Score=26.65 Aligned_cols=33 Identities=33% Similarity=0.487 Sum_probs=27.7
Q ss_pred cCCCCEEEEEecchhhhHHHHHHHHHHHhCCCeEEEE
Q 025851 186 VQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVEC 222 (247)
Q Consensus 186 ~~~GkrVLIVDDIltTG~Tl~aa~~lLk~aGa~vV~v 222 (247)
..+|+++|| +-+|++.++++-.|.+.|+..+.+
T Consensus 122 ~~~~~~~li----lGaGGaarai~~aL~~~g~~~i~i 154 (269)
T 3tum_A 122 EPAGKRALV----IGCGGVGSAIAYALAEAGIASITL 154 (269)
T ss_dssp CCTTCEEEE----ECCSHHHHHHHHHHHHTTCSEEEE
T ss_pred CcccCeEEE----EecHHHHHHHHHHHHHhCCCeEEE
Confidence 357899996 589999999999999999876553
No 112
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=23.42 E-value=1.1e+02 Score=22.20 Aligned_cols=31 Identities=16% Similarity=0.080 Sum_probs=18.8
Q ss_pred CCCCEEEEEecchhhhHHHHHHHHHHHhCCCeEE
Q 025851 187 QAGERALIVDDLVATGGTLSAAIRLLERVGVHVV 220 (247)
Q Consensus 187 ~~GkrVLIVDDIltTG~Tl~aa~~lLk~aGa~vV 220 (247)
....+||||||=-.... ...+.|++.|..+.
T Consensus 12 ~~~~~ILivdd~~~~~~---~l~~~L~~~g~~v~ 42 (153)
T 3hv2_A 12 TRRPEILLVDSQEVILQ---RLQQLLSPLPYTLH 42 (153)
T ss_dssp CSCCEEEEECSCHHHHH---HHHHHHTTSSCEEE
T ss_pred cCCceEEEECCCHHHHH---HHHHHhcccCcEEE
Confidence 45678999998654433 34445556665543
No 113
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=23.35 E-value=82 Score=21.71 Aligned_cols=32 Identities=13% Similarity=0.201 Sum_probs=29.9
Q ss_pred cCCCCEEEEEecchhhhHHHHHHHHHHHhCCC
Q 025851 186 VQAGERALIVDDLVATGGTLSAAIRLLERVGV 217 (247)
Q Consensus 186 ~~~GkrVLIVDDIltTG~Tl~aa~~lLk~aGa 217 (247)
+..|+.|+=|++.-.+|.|...+.++|+..+.
T Consensus 47 L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~ 78 (93)
T 3o46_A 47 IHVGDELREVNGIPVEDKRPEEIIQILAQSQG 78 (93)
T ss_dssp CCTTCEEEEETTEESTTSCHHHHHHHHHHCCE
T ss_pred CCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 78999999999999999999999999999875
No 114
>1gmx_A GLPE protein; transferase, rhodanese, sulfurtransferase, glycerol metabolism; 1.1A {Escherichia coli} SCOP: c.46.1.3 PDB: 1gn0_A
Probab=23.34 E-value=54 Score=23.37 Aligned_cols=32 Identities=19% Similarity=0.218 Sum_probs=25.9
Q ss_pred cCCCCEEEEEecchhhhHHHHHHHHHHHhCCCeEE
Q 025851 186 VQAGERALIVDDLVATGGTLSAAIRLLERVGVHVV 220 (247)
Q Consensus 186 ~~~GkrVLIVDDIltTG~Tl~aa~~lLk~aGa~vV 220 (247)
+.+++.|+++++ +|.....++..|++.|.+.+
T Consensus 55 l~~~~~ivvyc~---~g~rs~~a~~~L~~~G~~~v 86 (108)
T 1gmx_A 55 NDFDTPVMVMCY---HGNSSKGAAQYLLQQGYDVV 86 (108)
T ss_dssp SCTTSCEEEECS---SSSHHHHHHHHHHHHTCSSE
T ss_pred cCCCCCEEEEcC---CCchHHHHHHHHHHcCCceE
Confidence 457888999986 68888889999999998644
No 115
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=22.95 E-value=1.3e+02 Score=21.48 Aligned_cols=27 Identities=30% Similarity=0.268 Sum_probs=14.3
Q ss_pred CEEEEEecchhhhHHHHHHHHHHHhCCCeE
Q 025851 190 ERALIVDDLVATGGTLSAAIRLLERVGVHV 219 (247)
Q Consensus 190 krVLIVDDIltTG~Tl~aa~~lLk~aGa~v 219 (247)
.+||||||=-..- ....+.|++.|..+
T Consensus 4 ~~ilivdd~~~~~---~~l~~~l~~~g~~v 30 (143)
T 3jte_A 4 AKILVIDDESTIL---QNIKFLLEIDGNEV 30 (143)
T ss_dssp CEEEEECSCHHHH---HHHHHHHHHTTCEE
T ss_pred CEEEEEcCCHHHH---HHHHHHHHhCCceE
Confidence 4678888754333 33334445555443
No 116
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=22.94 E-value=1.1e+02 Score=27.06 Aligned_cols=44 Identities=9% Similarity=-0.082 Sum_probs=30.2
Q ss_pred HHHHHHHHHHhccCCccEEEecCCcchhHH-HHHHHHhCCCeEEe
Q 025851 112 RDTIDLFVERYKDKNISVVAGIEARGFIFG-PPIALAIGAKFVPM 155 (247)
Q Consensus 112 ~~l~~~La~~~~~~~iDvVVgve~rGf~lA-~~LA~~Lg~p~v~i 155 (247)
..+...+.+.+...++|+|++.......++ ...|..+++|++.+
T Consensus 97 ~~~~~~l~~~l~~~kPDvVi~~g~~~~~~~~~~aa~~~~IPv~h~ 141 (396)
T 3dzc_A 97 SKILLGMQQVLSSEQPDVVLVHGDTATTFAASLAAYYQQIPVGHV 141 (396)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEETTSHHHHHHHHHHHTTTCCEEEE
T ss_pred HHHHHHHHHHHHhcCCCEEEEECCchhHHHHHHHHHHhCCCEEEE
Confidence 344455555666678999999876666444 55677789998754
No 117
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=22.93 E-value=1.5e+02 Score=20.96 Aligned_cols=30 Identities=7% Similarity=0.097 Sum_probs=19.9
Q ss_pred CCCEEEEEecchhhhHHHHHHHHHHHh-CCCeEE
Q 025851 188 AGERALIVDDLVATGGTLSAAIRLLER-VGVHVV 220 (247)
Q Consensus 188 ~GkrVLIVDDIltTG~Tl~aa~~lLk~-aGa~vV 220 (247)
...+||||||=-..-..+. +.|++ .|.+++
T Consensus 3 ~~~~ilivdd~~~~~~~l~---~~L~~~~~~~v~ 33 (140)
T 3lua_A 3 LDGTVLLIDYFEYEREKTK---IIFDNIGEYDFI 33 (140)
T ss_dssp CCCEEEEECSCHHHHHHHH---HHHHHHCCCEEE
T ss_pred CCCeEEEEeCCHHHHHHHH---HHHHhccCccEE
Confidence 3578999999766555444 55556 676654
No 118
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=22.92 E-value=1.1e+02 Score=27.41 Aligned_cols=44 Identities=9% Similarity=-0.052 Sum_probs=31.2
Q ss_pred HHHHHHHHHHhccCCccEEEecCCcchhHH-HHHHHHhCCCeEEe
Q 025851 112 RDTIDLFVERYKDKNISVVAGIEARGFIFG-PPIALAIGAKFVPM 155 (247)
Q Consensus 112 ~~l~~~La~~~~~~~iDvVVgve~rGf~lA-~~LA~~Lg~p~v~i 155 (247)
-.+...+.+.+...++|+|++.......++ ...|..+++|++.+
T Consensus 100 ~~~~~~l~~~l~~~kPD~Vi~~gd~~~~l~~~laA~~~~IPv~h~ 144 (403)
T 3ot5_A 100 SRVMNGINEVIAAENPDIVLVHGDTTTSFAAGLATFYQQKMLGHV 144 (403)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCchhHHHHHHHHHHhCCCEEEE
Confidence 344455556666678999999887666664 56677889998754
No 119
>3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A*
Probab=22.36 E-value=1.5e+02 Score=20.08 Aligned_cols=27 Identities=30% Similarity=0.383 Sum_probs=15.1
Q ss_pred CEEEEEecchhhhHHHHHHHHHHHhCCCeE
Q 025851 190 ERALIVDDLVATGGTLSAAIRLLERVGVHV 219 (247)
Q Consensus 190 krVLIVDDIltTG~Tl~aa~~lLk~aGa~v 219 (247)
.+||||||=-.....+.. .|++.|..+
T Consensus 2 ~~ilivdd~~~~~~~l~~---~l~~~~~~v 28 (116)
T 3a10_A 2 KRILVVDDEPNIRELLKE---ELQEEGYEI 28 (116)
T ss_dssp CEEEEECSCHHHHHHHHH---HHHHTTCEE
T ss_pred cEEEEEeCCHHHHHHHHH---HHHHCCCEE
Confidence 368888876655544443 334455543
No 120
>3iwh_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics, C structural genomics of infectious diseases, csgid; 2.00A {Staphylococcus aureus subsp} PDB: 3mzz_A
Probab=21.97 E-value=1.2e+02 Score=21.87 Aligned_cols=52 Identities=19% Similarity=0.164 Sum_probs=34.2
Q ss_pred ccCCCCEEEEEecchhhhHHHHHHHHHHHhCCCeEEEEEEEEeccCcccccccCCCCcccc
Q 025851 185 AVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVL 245 (247)
Q Consensus 185 ~~~~GkrVLIVDDIltTG~Tl~aa~~lLk~aGa~vV~v~vlv~~~~~~grekL~~~pv~sL 245 (247)
.+.+++.|+++. .+|.....+++.|++.|-+++. +.-+. .+... .+.||+++
T Consensus 52 ~l~~~~~ivv~C---~~G~rS~~aa~~L~~~G~~~~~----l~GG~-~~W~~-~g~pvesi 103 (103)
T 3iwh_A 52 SFNKNEIYYIVC---AGGVRSAKVVEYLEANGIDAVN----VEGGM-HAWGD-EGLEIKSI 103 (103)
T ss_dssp GCCTTSEEEEEC---SSSSHHHHHHHHHHTTTCEEEE----ETTHH-HHHCS-SSCBCCC-
T ss_pred hhcCCCeEEEEC---CCCHHHHHHHHHHHHcCCCEEE----ecChH-HHHHH-CCCcceeC
Confidence 356788898875 5788888999999999997642 22111 12222 46788764
No 121
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E
Probab=21.80 E-value=1.5e+02 Score=20.41 Aligned_cols=26 Identities=31% Similarity=0.441 Sum_probs=14.1
Q ss_pred CEEEEEecchhhhHHHHHHHHHHHhCCCe
Q 025851 190 ERALIVDDLVATGGTLSAAIRLLERVGVH 218 (247)
Q Consensus 190 krVLIVDDIltTG~Tl~aa~~lLk~aGa~ 218 (247)
.+||||||=-.....+. +.|++.|..
T Consensus 4 ~~ilivdd~~~~~~~l~---~~l~~~~~~ 29 (124)
T 1srr_A 4 EKILIVDDQSGIRILLN---EVFNKEGYQ 29 (124)
T ss_dssp CEEEEECSCHHHHHHHH---HHHHTTTCE
T ss_pred ceEEEEeCCHHHHHHHH---HHHHHCCcE
Confidence 46888887554444333 334445544
No 122
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=21.52 E-value=1.3e+02 Score=21.09 Aligned_cols=27 Identities=22% Similarity=0.319 Sum_probs=17.1
Q ss_pred EEEEEecchhhhHHHHHHHHHHHhCCCeEE
Q 025851 191 RALIVDDLVATGGTLSAAIRLLERVGVHVV 220 (247)
Q Consensus 191 rVLIVDDIltTG~Tl~aa~~lLk~aGa~vV 220 (247)
+||||||=-..-.. ..+.|++.|..++
T Consensus 3 ~ilivdd~~~~~~~---l~~~L~~~g~~v~ 29 (134)
T 3f6c_A 3 NAIIIDDHPLAIAA---IRNLLIKNDIEIL 29 (134)
T ss_dssp EEEEECCCHHHHHH---HHHHHHHTTEEEE
T ss_pred EEEEEcCCHHHHHH---HHHHHhhCCcEEE
Confidence 68999986655444 4455566775544
No 123
>1dcf_A ETR1 protein; beta-alpha five sandwich, transferase; 2.50A {Arabidopsis thaliana} SCOP: c.23.1.2
Probab=21.41 E-value=1.5e+02 Score=20.94 Aligned_cols=30 Identities=23% Similarity=0.360 Sum_probs=19.7
Q ss_pred CCCEEEEEecchhhhHHHHHHHHHHHhCCCeEE
Q 025851 188 AGERALIVDDLVATGGTLSAAIRLLERVGVHVV 220 (247)
Q Consensus 188 ~GkrVLIVDDIltTG~Tl~aa~~lLk~aGa~vV 220 (247)
.+.+||||||=-.....+.. +|++.|..+.
T Consensus 6 ~~~~ILivdd~~~~~~~l~~---~L~~~g~~v~ 35 (136)
T 1dcf_A 6 TGLKVLVMDENGVSRMVTKG---LLVHLGCEVT 35 (136)
T ss_dssp TTCEEEEECSCHHHHHHHHH---HHHHTTCEEE
T ss_pred CCCeEEEEeCCHHHHHHHHH---HHHHcCCeEE
Confidence 57899999997665554444 4455666543
No 124
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=21.36 E-value=1.5e+02 Score=19.68 Aligned_cols=28 Identities=14% Similarity=0.309 Sum_probs=14.4
Q ss_pred CCEEEEEecchhhhHHHHHHHHHHHhCCCeE
Q 025851 189 GERALIVDDLVATGGTLSAAIRLLERVGVHV 219 (247)
Q Consensus 189 GkrVLIVDDIltTG~Tl~aa~~lLk~aGa~v 219 (247)
+++||||||=-.....+ .+.|++.|..+
T Consensus 1 ~~~iliv~~~~~~~~~l---~~~l~~~g~~v 28 (119)
T 2j48_A 1 AGHILLLEEEDEAATVV---CEMLTAAGFKV 28 (119)
T ss_dssp CCEEEEECCCHHHHHHH---HHHHHHTTCEE
T ss_pred CCEEEEEeCCHHHHHHH---HHHHHhCCcEE
Confidence 35677777754443333 33344455543
No 125
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=20.89 E-value=1.5e+02 Score=20.86 Aligned_cols=31 Identities=19% Similarity=0.305 Sum_probs=20.3
Q ss_pred CCCCEEEEEecchhhhHHHHHHHHHHHhCCCeEE
Q 025851 187 QAGERALIVDDLVATGGTLSAAIRLLERVGVHVV 220 (247)
Q Consensus 187 ~~GkrVLIVDDIltTG~Tl~aa~~lLk~aGa~vV 220 (247)
..+.+||||||=-.....+.. .|++.|..+.
T Consensus 16 ~~~~~ilivdd~~~~~~~l~~---~L~~~g~~v~ 46 (137)
T 2pln_A 16 RGSMRVLLIEKNSVLGGEIEK---GLNVKGFMAD 46 (137)
T ss_dssp TTCSEEEEECSCHHHHHHHHH---HHHHTTCEEE
T ss_pred CCCCeEEEEeCCHHHHHHHHH---HHHHcCcEEE
Confidence 467899999997666555544 4445666543
No 126
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=20.80 E-value=86 Score=21.53 Aligned_cols=36 Identities=6% Similarity=0.131 Sum_probs=31.5
Q ss_pred cCCCCEEEEEecchhhhHHHHHHHHHHHhCCCeEEE
Q 025851 186 VQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVE 221 (247)
Q Consensus 186 ~~~GkrVLIVDDIltTG~Tl~aa~~lLk~aGa~vV~ 221 (247)
+..|+.|+=||+.-.++.+...+.++++..+.+++-
T Consensus 47 l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~~ 82 (95)
T 3r68_A 47 LKNNDLVVAVNGKSVEALDHDGVVEMIRKGGDQTTL 82 (95)
T ss_dssp CCTTEEEEEETTEECTTCCHHHHHHHHHTTTTEEEE
T ss_pred CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEE
Confidence 679999999999999998999999999998776544
No 127
>3eme_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics; 2.00A {Staphylococcus aureus subsp} PDB: 3iwh_A 3mzz_A
Probab=20.67 E-value=1.2e+02 Score=21.12 Aligned_cols=29 Identities=28% Similarity=0.290 Sum_probs=24.7
Q ss_pred cCCCCEEEEEecchhhhHHHHHHHHHHHhCCC
Q 025851 186 VQAGERALIVDDLVATGGTLSAAIRLLERVGV 217 (247)
Q Consensus 186 ~~~GkrVLIVDDIltTG~Tl~aa~~lLk~aGa 217 (247)
+.+++.|++++ .+|.....++..|++.|.
T Consensus 53 l~~~~~iv~yC---~~g~rs~~a~~~L~~~G~ 81 (103)
T 3eme_A 53 FNKNEIYYIVC---AGGVRSAKVVEYLEANGI 81 (103)
T ss_dssp CCTTSEEEEEC---SSSSHHHHHHHHHHTTTC
T ss_pred CCCCCeEEEEC---CCChHHHHHHHHHHHCCC
Confidence 45788999998 478888889999999998
No 128
>3n0r_A Response regulator; sigma factor, receiver, two-component SI transduction, signaling protein; HET: MSE GOL; 1.25A {Caulobacter vibrioides} PDB: 3t0y_A
Probab=20.62 E-value=1.4e+02 Score=25.25 Aligned_cols=30 Identities=20% Similarity=0.303 Sum_probs=20.9
Q ss_pred CCCEEEEEecchhhhHHHHHHHHHHHhCCCeEE
Q 025851 188 AGERALIVDDLVATGGTLSAAIRLLERVGVHVV 220 (247)
Q Consensus 188 ~GkrVLIVDDIltTG~Tl~aa~~lLk~aGa~vV 220 (247)
.+.+||||||=-..- ....++|++.|..++
T Consensus 159 l~~rILvVdD~~~~~---~~l~~~L~~~g~~v~ 188 (286)
T 3n0r_A 159 LATEVLIIEDEPVIA---ADIEALVRELGHDVT 188 (286)
T ss_dssp CCCEEEEECCSHHHH---HHHHHHHHHTTCEEE
T ss_pred CCCcEEEEcCCHHHH---HHHHHHhhccCceEE
Confidence 467899999965543 344466677888776
Done!