Query 025852
Match_columns 247
No_of_seqs 157 out of 468
Neff 4.4
Searched_HMMs 13730
Date Mon Mar 25 19:03:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025852.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/025852hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2fhfa1 b.1.18.2 (A:288-402) P 26.3 26 0.0019 24.7 3.5 43 38-80 26-74 (115)
2 d1bf2a1 b.1.18.2 (A:1-162) Iso 18.0 50 0.0037 24.4 3.7 42 38-79 25-80 (162)
3 d1wxaa1 d.15.1.5 (A:8-110) Afa 14.0 1.2E+02 0.0091 20.5 4.8 50 87-137 3-54 (103)
4 d1vlpa1 d.41.2.2 (A:1-149) Nic 12.6 15 0.0011 28.0 -0.8 42 115-156 51-93 (149)
5 d1f97a2 b.1.1.4 (A:129-238) Ju 11.6 45 0.0033 21.9 1.6 14 38-51 94-107 (110)
6 d1f9ya_ d.58.30.1 (A:) 6-hydro 11.4 1.6E+02 0.012 21.9 5.0 40 86-125 37-77 (158)
7 d1cbka_ d.58.30.1 (A:) 6-hydro 11.1 1.6E+02 0.012 21.9 5.0 41 86-126 38-79 (160)
8 d1zgka1 b.68.11.1 (A:322-609) 10.1 1.1E+02 0.0081 22.4 3.6 38 44-81 20-59 (288)
9 d1ig8a1 c.55.1.3 (A:18-224) He 8.0 22 0.0016 28.4 -1.5 49 116-165 5-58 (207)
10 d1mj4a_ d.120.1.1 (A:) Sulfite 8.0 66 0.0048 21.2 1.3 6 47-52 28-33 (80)
No 1
>d2fhfa1 b.1.18.2 (A:288-402) Pullulanase PulA {Klebsiella pneumoniae [TaxId: 573]}
Probab=26.31 E-value=26 Score=24.66 Aligned_cols=43 Identities=19% Similarity=0.197 Sum_probs=27.8
Q ss_pred CCCccEEEEEEeCCCCccccc----cccceeEeeeEE--EeCeEEEecc
Q 025852 38 PGRAPVYLNVYDLTPMNGYVH----WAGLGIYHSGVE--VHGVEYAFGA 80 (247)
Q Consensus 38 ~~~~~V~LnVYDLs~~n~~~~----~lGlGIyHTGVe--V~G~EY~FG~ 80 (247)
|....|.|.+||=........ .-.-||||.-|. ..|..|.|--
T Consensus 26 P~A~~V~L~l~~~~~~~~~~~~~~~~~~~GvW~~~i~~~~~G~~Y~y~v 74 (115)
T d2fhfa1 26 PTAQQVELVIYSADKKVIASHPMTRDSASGAWSWQGGSDLKGAFYRYAM 74 (115)
T ss_dssp TTCSEEEEEEECTTCCEEEEEECEECTTTCEEEEEECGGGTTCEEEEEE
T ss_pred CCCCEEEEEEECCCCCccceeeeeEcCCCCEEEEEECCCCCCCEEEEEE
Confidence 456889999998543222211 123599999886 4677777753
No 2
>d1bf2a1 b.1.18.2 (A:1-162) Isoamylase, N-terminal domain N {Pseudomonas amyloderamosa [TaxId: 32043]}
Probab=18.02 E-value=50 Score=24.43 Aligned_cols=42 Identities=21% Similarity=0.224 Sum_probs=25.8
Q ss_pred CCCccEEEEEEeCCCCcc--ccc---cccceeEeeeEEE---------eCeEEEec
Q 025852 38 PGRAPVYLNVYDLTPMNG--YVH---WAGLGIYHSGVEV---------HGVEYAFG 79 (247)
Q Consensus 38 ~~~~~V~LnVYDLs~~n~--~~~---~lGlGIyHTGVeV---------~G~EY~FG 79 (247)
+....|.|.+||=..... ... .-.-||||.-|.. .|..|.|-
T Consensus 25 p~A~~V~L~ly~~~~~~~~~~~~~l~~~~~gvW~~~v~~~~~~~~g~~~G~~Y~yr 80 (162)
T d1bf2a1 25 SQATRIVLYLYSAGYGVQESATYTLSPAGSGVWAVTVPVSSIKAAGITGAVYYGYR 80 (162)
T ss_dssp SSCSEEEEEEESSSSSCCCSEEEECEECSTTEEEEEEEHHHHHHTTCCSCCEEEEE
T ss_pred CCCCEEEEEEEcCCCCCcceeEEEcccccccEEEEEecccccccccCCCCcEEEEE
Confidence 456889999998654321 111 1235999987742 35567764
No 3
>d1wxaa1 d.15.1.5 (A:8-110) Afadin {Mouse (Mus musculus) [TaxId: 10090]}
Probab=14.00 E-value=1.2e+02 Score=20.45 Aligned_cols=50 Identities=20% Similarity=0.335 Sum_probs=35.5
Q ss_pred CeEEecCCCC-CCCCeeEEEEecCeeCCHHHHHHHHHHhhcc-CCCCCCCccc
Q 025852 87 GVFEVEPRLC-PGFKFRKSIFIGTTCLDPIQVREFMERQSAH-YNGDTYHLIV 137 (247)
Q Consensus 87 GIf~~~P~~~-pg~~fresI~LG~T~lt~~ev~~~l~~L~~~-f~g~tYhLl~ 137 (247)
|+..+-++.. |+..|+ ++.+-.++-..+.|.+.|+++.-. =.++.|.|..
T Consensus 3 G~lkVy~~~l~~~~~yk-~l~vs~~tTa~eVI~~~L~k~~l~~~~~~~y~L~e 54 (103)
T d1wxaa1 3 GTLRIYADSLKPNIPYK-TILLSTTDTADFAVAESLEKYGLEKENPKDYCIAR 54 (103)
T ss_dssp CEEEECCTTTCSSSCCE-EEECCSSCCHHHHHHHHHHHHTCSSSCTTTEEEEE
T ss_pred cEEEEEcCccCCCCCeE-EEEECCCCcHHHHHHHHHHHhCCCCCChhhEEEEE
Confidence 7777777653 555665 888888888888888899987632 3466777654
No 4
>d1vlpa1 d.41.2.2 (A:1-149) Nicotinate phosphoribosyltransferase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=12.60 E-value=15 Score=27.98 Aligned_cols=42 Identities=2% Similarity=0.006 Sum_probs=33.8
Q ss_pred HHHHHHHHHhh-ccCCCCCCCccccccchHHHHHHHHccCCCC
Q 025852 115 IQVREFMERQS-AHYNGDTYHLIVKNCNHFCKDICYKLTGKPI 156 (247)
Q Consensus 115 ~ev~~~l~~L~-~~f~g~tYhLl~rNCNHFS~elc~~L~Gk~I 156 (247)
..+++.|+.|+ -+|+.+..+-|..+|++|.+++..+|-+-+.
T Consensus 51 ~gl~~~i~~l~~lrFt~eel~yL~~~~~~~~~~fl~~L~~~rF 93 (149)
T d1vlpa1 51 NWLKEQFSYLGNLRFTEEEIEYLKQEIPYLPSAYIKYISSSNY 93 (149)
T ss_dssp HHHHHHHHHGGGCCCCHHHHHHHHHHCTTSCHHHHHHHHSTTC
T ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHcCCCCCHHHHHHHHhCCc
Confidence 45667777774 6889999999999999999999999976443
No 5
>d1f97a2 b.1.1.4 (A:129-238) Junction adhesion molecule, JAM, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=11.56 E-value=45 Score=21.88 Aligned_cols=14 Identities=7% Similarity=0.140 Sum_probs=11.3
Q ss_pred CCCccEEEEEEeCC
Q 025852 38 PGRAPVYLNVYDLT 51 (247)
Q Consensus 38 ~~~~~V~LnVYDLs 51 (247)
.....|.|+||||.
T Consensus 94 ~~s~~v~l~V~~l~ 107 (110)
T d1f97a2 94 MRSEAAHMDAVELN 107 (110)
T ss_dssp EECCCEEEEEESSC
T ss_pred EEEEEEEEEEEecC
Confidence 34568999999995
No 6
>d1f9ya_ d.58.30.1 (A:) 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK {Escherichia coli [TaxId: 562]}
Probab=11.36 E-value=1.6e+02 Score=21.93 Aligned_cols=40 Identities=15% Similarity=0.155 Sum_probs=30.4
Q ss_pred CCeEEecCCCCCC-CCeeEEEEecCeeCCHHHHHHHHHHhh
Q 025852 86 SGVFEVEPRLCPG-FKFRKSIFIGTTCLDPIQVREFMERQS 125 (247)
Q Consensus 86 sGIf~~~P~~~pg-~~fresI~LG~T~lt~~ev~~~l~~L~ 125 (247)
|-+++++|-..++ -.|--.+.+..|.+++.++.+.+..+.
T Consensus 37 S~~y~T~p~g~~~qp~F~N~v~~~~T~l~p~~ll~~l~~IE 77 (158)
T d1f9ya_ 37 SSFYRTPPLGPQDQPDYLNAAVALETSLAPEELLNHTQRIE 77 (158)
T ss_dssp CCCEEECCSSCSSSCCEEEEEEEEEECSCHHHHHHHHHHHH
T ss_pred ecceecccccccccchHhhhhhhhhhccCHHHHHHHHHHHH
Confidence 5678887754433 358888889999999999988887653
No 7
>d1cbka_ d.58.30.1 (A:) 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK {Haemophilus influenzae [TaxId: 727]}
Probab=11.15 E-value=1.6e+02 Score=21.91 Aligned_cols=41 Identities=15% Similarity=0.199 Sum_probs=30.8
Q ss_pred CCeEEecCCCCCC-CCeeEEEEecCeeCCHHHHHHHHHHhhc
Q 025852 86 SGVFEVEPRLCPG-FKFRKSIFIGTTCLDPIQVREFMERQSA 126 (247)
Q Consensus 86 sGIf~~~P~~~pg-~~fresI~LG~T~lt~~ev~~~l~~L~~ 126 (247)
|-+++++|-..++ -.|--.+...+|.+++.++.+.+..+..
T Consensus 38 S~~y~T~p~g~~~~p~FlN~vv~~~T~l~p~~Ll~~l~~IE~ 79 (160)
T d1cbka_ 38 SSFYKSKPLGPQDQPDYVNAVAKIETELSPLKLLDELQRIEN 79 (160)
T ss_dssp CCCEEECCSSCSSSCCEEEEEEEEEECSCHHHHHHHHHHHHH
T ss_pred cCceEcccccccchhhhhheeEEEEeCCCHHHHHHHHHHHHH
Confidence 5677887754433 3577788889999999999998876643
No 8
>d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=10.06 E-value=1.1e+02 Score=22.43 Aligned_cols=38 Identities=24% Similarity=0.265 Sum_probs=24.5
Q ss_pred EEEEEeCCCCc-cccccccc-eeEeeeEEEeCeEEEeccc
Q 025852 44 YLNVYDLTPMN-GYVHWAGL-GIYHSGVEVHGVEYAFGAH 81 (247)
Q Consensus 44 ~LnVYDLs~~n-~~~~~lGl-GIyHTGVeV~G~EY~FG~h 81 (247)
.+++||+...- ..+..+-. -..|+.+.+.|.-|.||+.
T Consensus 20 ~~~~yd~~t~~W~~~~~~p~~R~~~~~~~~~~~iyv~GG~ 59 (288)
T d1zgka1 20 YLEAYNPSNGTWLRLADLQVPRSGLAGCVVGGLLYAVGGR 59 (288)
T ss_dssp CEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCE
T ss_pred eEEEEECCCCeEEECCCCCCccceeEEEEECCEEEEEeCc
Confidence 37799998631 11111212 3368888889999999984
No 9
>d1ig8a1 c.55.1.3 (A:18-224) Hexokinase {Baker's yeast (Saccharomyces cerevisiae), pII [TaxId: 4932]}
Probab=7.98 E-value=22 Score=28.43 Aligned_cols=49 Identities=18% Similarity=0.309 Sum_probs=36.5
Q ss_pred HHHHHHHHhhccCCCCCCCccccccchHHHHHHHHccC-----CCCChhHHhhhh
Q 025852 116 QVREFMERQSAHYNGDTYHLIVKNCNHFCKDICYKLTG-----KPIPKWVNRLAK 165 (247)
Q Consensus 116 ev~~~l~~L~~~f~g~tYhLl~rNCNHFS~elc~~L~G-----k~IP~wVnRLa~ 165 (247)
++.+-++++.+.|.-+. +-|..--+||.+++.+-|.+ +.+|.||..+|.
T Consensus 5 ~~~~~~~~~~~~f~~~~-~~L~~i~~~f~~em~~GL~~~~~~~~MlPt~v~~lPt 58 (207)
T d1ig8a1 5 ELMQQIENFEKIFTVPT-ETLQAVTKHFISELEKGLSKKGGNIPMIPGWVMDFPT 58 (207)
T ss_dssp HHHHHHHHHHHHHCCCH-HHHHHHHHHHHHHHHHHHSTTCCSSCCEECCCCSCCC
T ss_pred HHHHHHHHHHHHhCCCH-HHHHHHHHHHHHHHHHHHccCCCCCcceeeccCCCCC
Confidence 34444666666776443 67888889999999999965 468999988884
No 10
>d1mj4a_ d.120.1.1 (A:) Sulfite oxidase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=7.97 E-value=66 Score=21.18 Aligned_cols=6 Identities=50% Similarity=0.944 Sum_probs=5.7
Q ss_pred EEeCCC
Q 025852 47 VYDLTP 52 (247)
Q Consensus 47 VYDLs~ 52 (247)
|||||+
T Consensus 28 VYDvT~ 33 (80)
T d1mj4a_ 28 VFDVTE 33 (80)
T ss_dssp EEECTT
T ss_pred EEeeee
Confidence 999997
Done!