BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025857
(247 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A2SU08|DHQS_METLZ 3-dehydroquinate synthase OS=Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z) GN=Mlab_1653 PE=3 SV=1
Length = 345
Score = 96.3 bits (238), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 102/196 (52%), Gaps = 10/196 (5%)
Query: 49 KPKRVWIWTESKQVMTAAVERGWNTFVFLSENQQLAIDWSTIALLDPLFIKEGEVYDSGD 108
+ + + E K ++ +A+E G+ + E++ L A+L +G+
Sbjct: 11 RADHLQTYDERKAIVASALESGYTHIILRPEDEALRHLGRYTAIL-----ADGKNLMYSG 65
Query: 109 RRVGSIIEVSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQGSGKTVFAISKT 168
R+G ++ ++ +E+++ N++I +W+VIP EN+++ FQ + +V+ KT
Sbjct: 66 ERIGVLLNLTGAEEMEEAYSLKNAVPNLIISPENWKVIPLENLISRFQNAETSVYICVKT 125
Query: 169 PSEAQIFLEALEQGLGGIVLKVEDVKAVLALKEYFDG-RNEVSNLLSLMKATVTRVDVAG 227
P EA++ + +E G GIV+ D A LA F G RN+ ++ L A VT++
Sbjct: 126 PEEARLAFQTMEVGCDGIVI-TPDGPADLAA---FSGIRNDEYPIVDLETAVVTKISTLS 181
Query: 228 MGDRVCVDLCSLMRPG 243
+GDRVC+D CSL+ G
Sbjct: 182 LGDRVCIDTCSLLERG 197
>sp|A0B6K6|DHQS_METTP 3-dehydroquinate synthase OS=Methanosaeta thermophila (strain DSM
6194 / PT) GN=Mthe_0539 PE=3 SV=2
Length = 362
Score = 83.6 bits (205), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 99/207 (47%), Gaps = 24/207 (11%)
Query: 56 WTESKQVMTAAVERGWNTFVFLSENQQLAIDWSTIAL--------------LDPLFIKEG 101
W + K ++T A+E G++ V ++ +L + +I + +D +E
Sbjct: 13 WDDVKPLITTALESGFDCVVVSRDHIELVRELGSIRIACFGRERGSEDLLIMDTSVPREN 72
Query: 102 EV--YDSGDRRVGSIIEVSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQGSG 159
++ + R +G +E+ + ++ + +++ DW+VIP EN++A+ QG
Sbjct: 73 QIKSVEKIGRPIGGYVEIRSKEDELFATELGKHVDYLLVVGTDWKVIPLENMIAALQGYD 132
Query: 160 KTVFAISKTPSEAQIFLEALEQGLGGIVLKVED---VKAVLALKEYFDGRNEVSNLLSLM 216
+ + ++ EA++ L LE G G++L D +K V A E + + L
Sbjct: 133 CKIISCVRSSEEAEVALSTLEHGADGVLLDTRDPSEIKRVQAAAERLG-----MSRIDLK 187
Query: 217 KATVTRVDVAGMGDRVCVDLCSLMRPG 243
ATV V GMGDRVCVD CSLMR G
Sbjct: 188 TATVVAVKPVGMGDRVCVDTCSLMRRG 214
>sp|Q0W131|DHQS_UNCMA 3-dehydroquinate synthase OS=Uncultured methanogenic archaeon RC-I
GN=UNCMA_03530 PE=3 SV=1
Length = 374
Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 64/108 (59%), Gaps = 3/108 (2%)
Query: 136 IVIDLPDWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKA 195
++I+ DW+VIP EN++A GSG + A ++ EA + L+ LE+G G+++ V+D
Sbjct: 122 LIIEGDDWKVIPLENLIAELGGSGTKILAKARDIDEASVALQTLEKGADGVLVDVDD--- 178
Query: 196 VLALKEYFDGRNEVSNLLSLMKATVTRVDVAGMGDRVCVDLCSLMRPG 243
L ++E + L L T+T V AG GDRVC+D CSLM PG
Sbjct: 179 PLKVREIARAVSTKQAGLGLTPVTITAVRDAGTGDRVCIDTCSLMTPG 226
>sp|Q12UJ7|DHQS_METBU 3-dehydroquinate synthase OS=Methanococcoides burtonii (strain DSM
6242) GN=Mbur_2000 PE=3 SV=2
Length = 379
Score = 78.2 bits (191), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 65/105 (61%), Gaps = 8/105 (7%)
Query: 142 DWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVED---VKAVLA 198
DW+VIP EN++A+ Q S + A + EA++ LE +E G G++L +D +KA +A
Sbjct: 132 DWKVIPLENLIAALQDSDVKIIAGVRDQDEAKLALETMEHGSEGVLLDSDDPNTIKATVA 191
Query: 199 LKEYFDGRNEVSNLLSLMKATVTRVDVAGMGDRVCVDLCSLMRPG 243
+ E R+ + + L L+ VT+V+ GMGDRVCVD C++M G
Sbjct: 192 VAE----RSGIED-LKLVPGKVTKVEAVGMGDRVCVDTCNMMTKG 231
>sp|O67751|DHQSH_AQUAE 3-dehydroquinate synthase homolog OS=Aquifex aeolicus (strain VF5)
GN=aq_1922 PE=3 SV=1
Length = 331
Score = 75.9 bits (185), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 99/201 (49%), Gaps = 28/201 (13%)
Query: 51 KRVWIWTE--SKQVMTAAVERGWNTFVFLSENQQLAIDW-STIALLDPLFIKEGEVYDSG 107
K W+W E +++++ A+E G N V + + + I ++ P G
Sbjct: 2 KEFWVWVEPFDRKIVSVALEAGANAVVIPEKGRVEEVKKVGRITVIAP----------DG 51
Query: 108 DRRVGS-----IIEVSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQGSGKTV 162
D ++G +I+ +E P + + ++++ DW VIP EN++A + +
Sbjct: 52 DLKLGEDVVYVLIKGKEDEERAAKYPPNVK---VIVETTDWTVIPLENLIAQRE----EL 104
Query: 163 FAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLALKEYFDGRNEVSNLLSLMKATVTR 222
+A+ K EA++ L+ LE+G+ G+VLK D+ + + + +E L L+ +T+
Sbjct: 105 YAVVKNAQEAEVALQTLEKGVKGVVLKSRDINEIKKVGQIV---SEHEEKLELVTIKITK 161
Query: 223 VDVAGMGDRVCVDLCSLMRPG 243
+ G+GDRVCVD SL+ G
Sbjct: 162 ILPLGLGDRVCVDTISLLHRG 182
>sp|O26680|DHQS_METTH 3-dehydroquinate synthase OS=Methanothermobacter thermautotrophicus
(strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
/ Delta H) GN=MTH_580 PE=3 SV=2
Length = 374
Score = 75.9 bits (185), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 102/220 (46%), Gaps = 39/220 (17%)
Query: 56 WTESKQVMTAAVERGWNTFVFLSENQQLAIDWSTIALLDP-------LFIKEGE------ 102
W E K +TAA+E G + V +++ ++ + L+ P L ++GE
Sbjct: 13 WDEKKTFITAALESGIDHIVDTADSGRIK-KLGNLTLISPDEDADIVLVGRDGEGDGTLE 71
Query: 103 ----------------VYDSGDRRVGSIIEVSTPQELQQLQPADGQAENIVIDLPDWQVI 146
+ +SG R+V + +E+ + + + + +++ DW++I
Sbjct: 72 LPETLEYSRDIEMASELSESG-RQVAAYVEIRSKAHEELARRLGRVVDYLILVGEDWKII 130
Query: 147 PAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVED---VKAVLALKEYF 203
P ENI+A Q + A EA++ LE LE G G++++ D +K + AL E
Sbjct: 131 PLENIIADLQEEDVKLIAAVADVDEARVALETLEHGTDGVLIEPADISQIKDIAALLENI 190
Query: 204 DGRNEVSNLLSLMKATVTRVDVAGMGDRVCVDLCSLMRPG 243
+ S L AT+TR++ G GDRVCVD CS+M G
Sbjct: 191 E-----SETYELKPATITRIEPIGSGDRVCVDTCSIMGIG 225
>sp|Q2NI00|DHQS_METST 3-dehydroquinate synthase OS=Methanosphaera stadtmanae (strain DSM
3091) GN=Msp_0090 PE=3 SV=1
Length = 359
Score = 75.9 bits (185), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 94/201 (46%), Gaps = 15/201 (7%)
Query: 56 WTESKQVMTAAVERGWNTFVFLSENQQLAI-------------DWSTIALLDPLFIKEGE 102
W + K+ + ++E G++ + L + + D + + L + + + + +
Sbjct: 12 WNDRKEAIVDSLESGFDHIMDLDNAETIKKLGSVTIISDKEDSDITLLGLNNKITMADIK 71
Query: 103 VYDSGDRRVGSIIEVSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQGSGKTV 162
+ V + +E++ + + A+ +++ +W+VIP ENI+AS Q +
Sbjct: 72 KAQESGKEVAAYVEINNKDDELLVSKLGTVADYVILKGKNWKVIPLENIIASLQNRTSKI 131
Query: 163 FAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLALKEYFDGRNEVSNLLSLMKATVTR 222
EA++ LE +E G G++L D + L + ++ S L ATVT+
Sbjct: 132 IVDVPNYEEAKLALETMEHGSDGVLLSSNDGNEIRKLGALIEKVSKES--YDLKAATVTK 189
Query: 223 VDVAGMGDRVCVDLCSLMRPG 243
V+ G+GDRVCVD CS+M G
Sbjct: 190 VESVGIGDRVCVDTCSMMNVG 210
>sp|A4G0J1|DHQS_METM5 3-dehydroquinate synthase OS=Methanococcus maripaludis (strain C5 /
ATCC BAA-1333) GN=MmarC5_1678 PE=3 SV=1
Length = 361
Score = 75.1 bits (183), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
Query: 136 IVIDLPDWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKA 195
+V++ DW +IP ENI+A G + ++ +A+ E LE+G+ G+VL ED+
Sbjct: 107 VVLEGSDWTIIPLENIIADLFGEEIKIVSVVTNVKDAEAAYEILEKGVDGVVLIPEDINE 166
Query: 196 VLALKEYFDGRNEVSNLLSLMKATVTRVDVAGMGDRVCVDLCSLMRPG 243
V + + N S L L ATVT+++ G GDRVC+D CS+M G
Sbjct: 167 VKDFSKLIERMN--SESLKLDYATVTKIEPVGSGDRVCIDTCSMMEMG 212
>sp|Q58646|DHQS_METJA 3-dehydroquinate synthase OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=MJ1249 PE=1 SV=1
Length = 361
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 66/116 (56%), Gaps = 8/116 (6%)
Query: 131 GQAENIVIDLPDWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVL-- 188
G +NI+++ DW +IP EN++A + A + EA++ E LE+G G++L
Sbjct: 102 GFVDNIILEGRDWTIIPLENLIADLFHRDVKIVASVNSVDEAKVAYEILEKGTDGVLLNP 161
Query: 189 -KVEDVKAVLALKEYFDGRNEVSNLLSLMKATVTRVDVAGMGDRVCVDLCSLMRPG 243
+ED+K + L E + ++L ATVT+V+ G GDRVC+D CSLM+ G
Sbjct: 162 KNLEDIKELSKLIEEMNKEK-----VALDVATVTKVEPIGSGDRVCIDTCSLMKIG 212
>sp|A9A8T5|DHQS_METM6 3-dehydroquinate synthase OS=Methanococcus maripaludis (strain C6 /
ATCC BAA-1332) GN=MmarC6_0943 PE=3 SV=1
Length = 361
Score = 72.8 bits (177), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
Query: 136 IVIDLPDWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKA 195
IV++ DW +IP ENI+A G + ++ + +A+ E LE+G+ G+VL D+
Sbjct: 107 IVLEGSDWTIIPLENIIADLFGEEIKIVSVVTSVKDAEAAYEILEKGVDGVVLIPNDINE 166
Query: 196 VLALKEYFDGRNEVSNLLSLMKATVTRVDVAGMGDRVCVDLCSLMRPG 243
V + + N S + L ATVT+++ G GDRVC+D CS+M G
Sbjct: 167 VKDFSKLIERMN--SESVKLDYATVTKIEPVGSGDRVCIDTCSMMEMG 212
>sp|A6VHZ4|DHQS_METM7 3-dehydroquinate synthase OS=Methanococcus maripaludis (strain C7 /
ATCC BAA-1331) GN=MmarC7_1003 PE=3 SV=1
Length = 361
Score = 70.9 bits (172), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
Query: 136 IVIDLPDWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKA 195
++++ DW +IP ENI+A G + ++ +A+ E LE+G+ G+VL +D+
Sbjct: 107 VILEGSDWTIIPLENIIADLFGEEIKLVSVVTNVKDAEAAYEILEKGVDGVVLIPKDINE 166
Query: 196 VLALKEYFDGRNEVSNLLSLMKATVTRVDVAGMGDRVCVDLCSLMRPG 243
V + + N S + L ATVT+++ G GDRVC+D CS+M G
Sbjct: 167 VKDFSKLIERMN--SESVKLDYATVTKIEPVGSGDRVCIDTCSMMEMG 212
>sp|Q2FQ51|DHQS_METHJ 3-dehydroquinate synthase OS=Methanospirillum hungatei (strain JF-1
/ DSM 864) GN=Mhun_1034 PE=3 SV=1
Length = 328
Score = 70.5 bits (171), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 62/109 (56%), Gaps = 7/109 (6%)
Query: 135 NIVIDLPDWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVK 194
I++ PDW +IP EN+VA G V A+ EA+ L LE+G+ G+++K +D
Sbjct: 78 RIIVHTPDWTIIPLENLVAC----GDNVIAVVSDIKEAEQALTVLEKGVSGVLVKTDDPD 133
Query: 195 AVLALKEYFDGRNEVSNLLSLMKATVTRVDVAGMGDRVCVDLCSLMRPG 243
V ++ ++ +S L + TVT V AGMG+RVCVD CSLM G
Sbjct: 134 LVRSICRMV--QSGISGQ-QLHRLTVTTVKPAGMGERVCVDTCSLMVDG 179
>sp|C0QRE8|DHQSH_PERMH 3-dehydroquinate synthase homolog OS=Persephonella marina (strain
DSM 14350 / EX-H1) GN=PERMA_1476 PE=3 SV=1
Length = 331
Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 90/184 (48%), Gaps = 14/184 (7%)
Query: 60 KQVMTAAVERGWNTFVFLSENQQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVST 119
K+++T A+E G + + + ++ A + + + K+G + D I+ +
Sbjct: 13 KKIVTTAIESGADYIIIPEDKEEEAKKLGRVNFI--IADKKGNLTDDF-----VIVTIKN 65
Query: 120 PQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEAL 179
Q+ ++ + +++ DW +IP EN++A + ++A K EA I + L
Sbjct: 66 KQDEEKAAQLAKAGKKVIVRTTDWTIIPLENLIAQSE----NIYAEVKNADEASIAVGIL 121
Query: 180 EQGLGGIVLKVEDVKAVLALKEYFDGRNEVSNLLSLMKATVTRVDVAGMGDRVCVDLCSL 239
E+G+ G+VL+ ED+ + + E + + L++A VT + GMGDRV VD SL
Sbjct: 122 EKGVKGVVLETEDLNEIKRVASVI---KETTEKVELIRAKVTAIIPVGMGDRVAVDTTSL 178
Query: 240 MRPG 243
+ G
Sbjct: 179 FKRG 182
>sp|A6UW69|DHQS_META3 3-dehydroquinate synthase OS=Methanococcus aeolicus (strain
Nankai-3 / ATCC BAA-1280) GN=Maeo_1164 PE=3 SV=1
Length = 362
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
Query: 136 IVIDLPDWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKA 195
I+++ DW +IP EN++A + +++K ++A+ E LE+G+ G++ +D+
Sbjct: 107 IILEGKDWNIIPLENLIADLFDENIKIVSLAKDINDARTAYEILERGVDGVLYVPKDIND 166
Query: 196 VLALKEYFDGRNEVSNLLSLMKATVTRVDVAGMGDRVCVDLCSLMRPG 243
V + N S L L AT+T+V+ G GDRVC+D CS+M G
Sbjct: 167 VKDFATLIEKMN--SEKLDLDCATITKVEAIGSGDRVCIDTCSMMEMG 212
>sp|O30010|DHQS_ARCFU 3-dehydroquinate synthase OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=AF_0229 PE=3 SV=1
Length = 323
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 101/203 (49%), Gaps = 39/203 (19%)
Query: 51 KRVWI------WTESKQVMTAAVERGWNTFV----FLSENQQLAIDWSTIALLDPLFIKE 100
K +W+ W E+K+++ A+E G++ + FL ++L + + D
Sbjct: 2 KEIWLLAESESWDEAKEMLKDAIEIGFDGALVRRDFLERAEKLG-RMKIVPIED------ 54
Query: 101 GEVYDSGDRRVGSIIEVSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQGSGK 160
+++++S+ ++ Q Q E +V+ DW+VIP ENIVA + SGK
Sbjct: 55 ------------AVVKISSAED----QERALQREVVVLKFEDWKVIPLENIVA-MKKSGK 97
Query: 161 TVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLALKEYFDGRNEVSNLLSLMKATV 220
+ A+ T +A++ L LE+G GI + + L+++++ E + L++A V
Sbjct: 98 VIAAVD-TIEDAKLALTTLERGADGIAVSGDR----ETLRKFYEVVKEEGERVELVRARV 152
Query: 221 TRVDVAGMGDRVCVDLCSLMRPG 243
+ G+G+RVC+D +LM PG
Sbjct: 153 KEIRPLGVGERVCIDTVTLMTPG 175
>sp|Q46DZ8|DHQS_METBF 3-dehydroquinate synthase OS=Methanosarcina barkeri (strain Fusaro
/ DSM 804) GN=Mbar_A0921 PE=3 SV=1
Length = 380
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 63/110 (57%), Gaps = 6/110 (5%)
Query: 136 IVIDLPDWQVIPAENIVASFQGSG-KTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVK 194
+++ DW+VIP EN++A Q K +F + K EA++ + LE G G++L +++
Sbjct: 127 LIVTGTDWKVIPLENLIAELQRYDVKIIFGV-KNAEEARLAFKTLETGADGVLLNSGNIQ 185
Query: 195 AVLALKEYFDGRNEVSN-LLSLMKATVTRVDVAGMGDRVCVDLCSLMRPG 243
+ K+ E+ N L A +TRV+ GMGDRVCVD C+LM+ G
Sbjct: 186 EI---KDTIQAAREMENERTELESAVITRVEPLGMGDRVCVDTCNLMQKG 232
>sp|Q6M1B0|DHQS_METMP 3-dehydroquinate synthase OS=Methanococcus maripaludis (strain S2 /
LL) GN=MMP0006 PE=3 SV=1
Length = 361
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 60/108 (55%), Gaps = 2/108 (1%)
Query: 136 IVIDLPDWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKA 195
+V++ DW +IP ENI+A + ++ +A+ E LE+G+ G+VL +D+
Sbjct: 107 VVLEGSDWTIIPLENIIADLFSEEIKIVSVVTNVKDAEAAYEILEKGVDGVVLIPKDINE 166
Query: 196 VLALKEYFDGRNEVSNLLSLMKATVTRVDVAGMGDRVCVDLCSLMRPG 243
V + + N S + L ATVT+++ G GDRVC+D CS+M G
Sbjct: 167 VKDFSKLIERMN--SESVKLDYATVTKIEPVGSGDRVCIDTCSMMEMG 212
>sp|B1L5W7|DHQS_KORCO 3-dehydroquinate synthase OS=Korarchaeum cryptofilum (strain OPF8)
GN=Kcr_1100 PE=3 SV=1
Length = 334
Score = 68.9 bits (167), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 74/134 (55%), Gaps = 13/134 (9%)
Query: 113 SIIEVSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQGSGKTVFAISKTPSEA 172
++ ++ P++++ L+ + +I+ W++IP ENI+A G+ ++AI+ EA
Sbjct: 61 TLFKIRGPEDVEILR-REANERKFLIESESWKIIPLENIIAEV--GGERIYAIADDLEEA 117
Query: 173 QIFLEALEQGLGGIVLKVED---VKAVLALKEYFDGRNEVSNLLSLMKATVTRVDVAGMG 229
+ L LE G+ G+V+ ++D ++ L L E N L+L +A VT V GMG
Sbjct: 118 RSLLGVLEIGVKGVVIPIKDSAQLERALRLSEEV-------NPLNLREARVTEVKQVGMG 170
Query: 230 DRVCVDLCSLMRPG 243
DRVCVD S++ G
Sbjct: 171 DRVCVDTTSILSKG 184
>sp|A9A235|DHQS_NITMS 3-dehydroquinate synthase OS=Nitrosopumilus maritimus (strain SCM1)
GN=Nmar_0552 PE=3 SV=1
Length = 353
Score = 68.9 bits (167), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 67/136 (49%), Gaps = 6/136 (4%)
Query: 109 RRVGSIIEVSTPQELQQ-LQPADGQAENIVIDLPDWQVIPAENIVASFQGSGKTVFAISK 167
++VG EV + +++ L A + +V+++ DW++IP ENI+A +FA+++
Sbjct: 72 KKVGRKFEVLSNTDIENILTIAKKGLDFVVVEVKDWKIIPLENIIAKLHKIHTKIFAVAR 131
Query: 168 TPSEAQIFLEALEQGLGGIVLKVEDVKAVLALKEYFDGRNEVSNLLSLMKATVTRVDVAG 227
TP E + LE G+ G++ + V Y R+ + A + + G
Sbjct: 132 TPEEVRKMFSILEVGVDGVIFNTSSINEVREAMVYLGTRS-----FDMKPAKIIDIKEVG 186
Query: 228 MGDRVCVDLCSLMRPG 243
G+RVCVD S++ G
Sbjct: 187 DGERVCVDTASMLHKG 202
>sp|A7I8L5|DHQS_METB6 3-dehydroquinate synthase OS=Methanoregula boonei (strain 6A8)
GN=Mboo_1559 PE=3 SV=1
Length = 329
Score = 68.9 bits (167), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 94/196 (47%), Gaps = 21/196 (10%)
Query: 51 KRVWIWTE--SKQVMTAAVERGWNTFVFLSENQQLAIDWSTIALLDPLFIKEGEVYDSGD 108
K+ W+ +K V+T A+E G + V +E I + P +G++ D
Sbjct: 2 KQFWVDARPWNKDVVTTAIESGADAVV--AEKAADVKRLGRITTVAP----DGDLVPGKD 55
Query: 109 RRVGSIIEVS-TPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQGSGKTVFAISK 167
+IE + T + + A+G+ +++ DW VIP EN+VA + A K
Sbjct: 56 -----VIECTITDKASENEAAANGKNRIVIVTTSDWTVIPLENLVAQSD----KIIAEVK 106
Query: 168 TPSEAQIFLEALEQGLGGIVLKVEDVKAVLALKEYFDGRNEVSNLLSLMKATVTRVDVAG 227
EA++ + LE+G+ GI+LK D V A+ S + L+ TVT++ G
Sbjct: 107 NVHEAELAIHVLEKGVYGILLKTSDPAVVKAVAALV---KSTSGSVQLVPFTVTKIHPVG 163
Query: 228 MGDRVCVDLCSLMRPG 243
MGDRVCVD CS++ G
Sbjct: 164 MGDRVCVDTCSMLADG 179
>sp|A5UJ82|DHQS_METS3 3-dehydroquinate synthase OS=Methanobrevibacter smithii (strain PS
/ ATCC 35061 / DSM 861) GN=Msm_0055 PE=3 SV=1
Length = 368
Score = 68.6 bits (166), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 64/126 (50%), Gaps = 3/126 (2%)
Query: 119 TPQELQQLQPADGQ-AENIVIDLPDWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLE 177
T + +QL + G A+ I++ DW VIP ENI+A Q + + A A++ +E
Sbjct: 96 TDKNHEQLAVSLGSVADYIILISTDWTVIPLENIIADLQKADVKIIAAVADEDGAKLAIE 155
Query: 178 ALEQGLGGIVLKVEDVKAVLALKEYFDGRNEVSNLLSLMKATVTRVDVAGMGDRVCVDLC 237
LE G G++ + D + + + +++ L ATVT V G GDRVCVD
Sbjct: 156 TLEHGTDGVIFEANDFNQIKKIAQLVVDASKIK--YDLKVATVTNVKPLGSGDRVCVDTT 213
Query: 238 SLMRPG 243
+M+PG
Sbjct: 214 DMMKPG 219
>sp|Q8TVI1|DHQS_METKA 3-dehydroquinate synthase OS=Methanopyrus kandleri (strain AV19 /
DSM 6324 / JCM 9639 / NBRC 100938) GN=MK1408 PE=3 SV=1
Length = 402
Score = 66.6 bits (161), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 50/102 (49%)
Query: 142 DWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLALKE 201
DW++IP EN++A QG + A ++ EA+I E LE G G++L E + K
Sbjct: 149 DWKIIPLENLIAELQGEKTQLIAGARDAEEARIAFETLEVGSDGVLLDAERIDPSEIKKT 208
Query: 202 YFDGRNEVSNLLSLMKATVTRVDVAGMGDRVCVDLCSLMRPG 243
+ L+ V V G GDRVCVD CSLM G
Sbjct: 209 AEIAERAAAERFELVAVEVKEVKPIGKGDRVCVDTCSLMSEG 250
>sp|A6URJ1|DHQS_METVS 3-dehydroquinate synthase OS=Methanococcus vannielii (strain SB /
ATCC 35089 / DSM 1224) GN=Mevan_1215 PE=3 SV=1
Length = 361
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 60/108 (55%), Gaps = 2/108 (1%)
Query: 136 IVIDLPDWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKA 195
I+++ DW +IP ENI+A + ++ ++A+ E LE+G+ G+VL +D+
Sbjct: 107 IILEGKDWTIIPLENIIADLFNEDIKIVSLVNNVNDAKAAYEILEKGVDGVVLVPKDINE 166
Query: 196 VLALKEYFDGRNEVSNLLSLMKATVTRVDVAGMGDRVCVDLCSLMRPG 243
V + D N N ++L A + +++ G GDRVC+D CS+M G
Sbjct: 167 VKEFSKLIDSMN-FEN-VALDYAVIKKIEPVGSGDRVCIDTCSIMEIG 212
>sp|Q8PXE8|DHQS_METMA 3-dehydroquinate synthase OS=Methanosarcina mazei (strain ATCC
BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88)
GN=MM_1272 PE=3 SV=1
Length = 380
Score = 63.9 bits (154), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 58/104 (55%), Gaps = 6/104 (5%)
Query: 142 DWQVIPAENIVASFQGSG-KTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLALK 200
DW+VIP EN++A Q K +F + K+ EA++ + LE G G++L D +K
Sbjct: 133 DWKVIPLENLIADLQREKVKIIFGV-KSAEEARLAFQTLETGADGVLL---DSGNPQEIK 188
Query: 201 EYFDG-RNEVSNLLSLMKATVTRVDVAGMGDRVCVDLCSLMRPG 243
+ R S L A VTRV+ GMGDRVCVD C+LM+ G
Sbjct: 189 DTIKAARELESESTELESAVVTRVEPLGMGDRVCVDTCNLMQRG 232
>sp|A3CV31|DHQS_METMJ 3-dehydroquinate synthase OS=Methanoculleus marisnigri (strain ATCC
35101 / DSM 1498 / JR1) GN=Memar_1301 PE=3 SV=1
Length = 328
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 58/108 (53%), Gaps = 7/108 (6%)
Query: 136 IVIDLPDWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKA 195
+++ DW VIP EN+VA S + V A+ EA++ L LE+G GI+L +D
Sbjct: 79 VIVRTGDWTVIPLENLVAQ---SDRIVAAVGNA-DEAKVALTVLERGTAGILLATDDPAE 134
Query: 196 VLALKEYFDGRNEVSNLLSLMKATVTRVDVAGMGDRVCVDLCSLMRPG 243
V + + G + L+ VTR+ GMGDRVCVD CS++ G
Sbjct: 135 VRRVAKTIAG---AGASVPLVPFEVTRIVPVGMGDRVCVDTCSILADG 179
>sp|B8GF73|DHQS_METPE 3-dehydroquinate synthase OS=Methanosphaerula palustris (strain
ATCC BAA-1556 / DSM 19958 / E1-9c) GN=Mpal_2609 PE=3
SV=1
Length = 328
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 57/108 (52%), Gaps = 7/108 (6%)
Query: 136 IVIDLPDWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKA 195
+++ DW VIP EN+VA +FA + EA++ L LEQG+ G+VL D +
Sbjct: 79 VIVSTGDWTVIPLENLVAQ----SDRIFAAVGSVEEARLALTILEQGVAGVVLMTTDPEV 134
Query: 196 VLALKEYFDGRNEVSNLLSLMKATVTRVDVAGMGDRVCVDLCSLMRPG 243
+ + G + L+ T+T V GMGDRVC+D CS++ G
Sbjct: 135 IRTVAAMVRG---AGAKVPLVPFTLTVVRQLGMGDRVCIDTCSILADG 179
>sp|Q8THC5|DHQS_METAC 3-dehydroquinate synthase OS=Methanosarcina acetivorans (strain
ATCC 35395 / DSM 2834 / JCM 12185 / C2A) GN=MA_4592 PE=3
SV=1
Length = 380
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 58/104 (55%), Gaps = 6/104 (5%)
Query: 142 DWQVIPAENIVASFQGSG-KTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLALK 200
DW+VIP EN++A Q K +F + K+ EA++ + LE G G++L D +K
Sbjct: 133 DWKVIPLENLIADLQHQKVKIIFGV-KSAEEARLAFQTLEAGADGVLL---DSGNPQEIK 188
Query: 201 EYFDG-RNEVSNLLSLMKATVTRVDVAGMGDRVCVDLCSLMRPG 243
+ R S L A VTRV+ GMGDRVCVD C+LM+ G
Sbjct: 189 DTIKAARELESESAELEAAVVTRVEPLGMGDRVCVDTCNLMQRG 232
>sp|Q18DY6|DHQS_HALWD 3-dehydroquinate synthase OS=Haloquadratum walsbyi (strain DSM
16790) GN=HQ_1155A PE=3 SV=1
Length = 399
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 57/103 (55%), Gaps = 9/103 (8%)
Query: 142 DWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVED---VKAVLA 198
DW +IP EN++A GS T+ A + EAQ E LE G G++L +D ++ +A
Sbjct: 153 DWTIIPLENLIARI-GSETTLIAGVTSAEEAQTAFETLEIGADGVLLDTDDPDEIRETVA 211
Query: 199 LKEYFDGRNEVSNLLSLMKATVTRVDVAGMGDRVCVDLCSLMR 241
+++ + L L ATV ++ AGM DRVCVD +LM+
Sbjct: 212 VRDATE-----RETLELEWATVIDIERAGMADRVCVDTANLMQ 249
>sp|Q3IRN3|DHQS_NATPD 3-dehydroquinate synthase OS=Natronomonas pharaonis (strain DSM
2160 / ATCC 35678) GN=NP_2238A PE=3 SV=1
Length = 388
Score = 60.8 bits (146), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
Query: 142 DWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLALKE 201
DWQ+IP EN++A G + A +T EA+ E LE G ++L ++ + A E
Sbjct: 141 DWQIIPLENLIARI-GDETDLIAGVQTAEEAETAFETLELGADAVLLDTDNPDEIRATVE 199
Query: 202 YFDGRNEVSNLLSLMKATVTRVDVAGMGDRVCVDLCSLM 240
D L L +ATVT ++ G DRVCVD S++
Sbjct: 200 ARDATE--RETLDLQRATVTEIEETGSADRVCVDTASML 236
>sp|A0RU27|DHQS_CENSY 3-dehydroquinate synthase OS=Cenarchaeum symbiosum (strain A)
GN=CENSYa_0201 PE=3 SV=1
Length = 338
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 73/148 (49%), Gaps = 12/148 (8%)
Query: 100 EGEVYDSGDRRVGSIIEVSTPQELQQ-LQPADGQAENIVIDLPDWQVIPAENIVASFQGS 158
EG ++VG ++ + +++ LQ A + ++ ++ DW++IP EN++A
Sbjct: 48 EGRAAKPRGKKVGRRFKILSNKDIDGVLQEAQKGLDFVITEVQDWKIIPLENMIAKLHKI 107
Query: 159 GKTVFAISKTPSEAQIFLEALEQGLGGIVL---KVEDVKAVLALKEYFDGRNEVSNLLSL 215
++A++++P+E + L+ G+ G++ V DV+ L + + L
Sbjct: 108 HTRLYAVARSPAEVRKMFSILDVGVDGVIFTASTVGDVREALV--------HLGTKSFRL 159
Query: 216 MKATVTRVDVAGMGDRVCVDLCSLMRPG 243
A +T + G G+RVCVD S++ G
Sbjct: 160 QPARITEIREVGDGERVCVDTASMLERG 187
>sp|Q9HSB6|DHQS_HALSA 3-dehydroquinate synthase OS=Halobacterium salinarum (strain ATCC
700922 / JCM 11081 / NRC-1) GN=VNG_0310C PE=3 SV=1
Length = 387
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 63/111 (56%), Gaps = 9/111 (8%)
Query: 133 AENIVIDLPDWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVED 192
A++ ++ DW +IP EN++A G T+ A ++ +EA+ E L+ G ++L +D
Sbjct: 131 ADHTIVVGDDWTIIPLENLIARI-GEETTLVAGVESAAEAETAFETLDIGADAVLLDSDD 189
Query: 193 ---VKAVLALKEYFDGRNEVSNLLSLMKATVTRVDVAGMGDRVCVDLCSLM 240
++ +++++ D + L+L AT+T ++ AG DRVCVD SL+
Sbjct: 190 PDEIRRTVSVRDAADREH-----LALSTATITTIEEAGSADRVCVDTGSLL 235
>sp|B0R336|DHQS_HALS3 3-dehydroquinate synthase OS=Halobacterium salinarum (strain ATCC
29341 / DSM 671 / R1) GN=OE_1475F PE=3 SV=1
Length = 387
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 63/111 (56%), Gaps = 9/111 (8%)
Query: 133 AENIVIDLPDWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVED 192
A++ ++ DW +IP EN++A G T+ A ++ +EA+ E L+ G ++L +D
Sbjct: 131 ADHTIVVGDDWTIIPLENLIARI-GEETTLVAGVESAAEAETAFETLDIGADAVLLDSDD 189
Query: 193 ---VKAVLALKEYFDGRNEVSNLLSLMKATVTRVDVAGMGDRVCVDLCSLM 240
++ +++++ D + L+L AT+T ++ AG DRVCVD SL+
Sbjct: 190 PDEIRRTVSVRDAADREH-----LALSTATITTIEEAGSADRVCVDTGSLL 235
>sp|Q5V143|DHQS_HALMA 3-dehydroquinate synthase OS=Haloarcula marismortui (strain ATCC
43049 / DSM 3752 / JCM 8966 / VKM B-1809) GN=rrnAC1879
PE=3 SV=1
Length = 388
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 52/101 (51%), Gaps = 7/101 (6%)
Query: 142 DWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLALKE 201
+WQ+IP EN++A G + A +T +A+ E LE G G++L ++V + E
Sbjct: 141 NWQIIPLENLIARV-GEETDLIAGVRTAEDARTAYETLELGADGVLLDTDEVDEIRKTVE 199
Query: 202 YFD--GRNEVSNLLSLMKATVTRVDVAGMGDRVCVDLCSLM 240
D GR L L A VT ++ G DRVC+D SLM
Sbjct: 200 VRDEMGRES----LDLEYAEVTAIEQTGSADRVCIDTGSLM 236
>sp|A0JC76|GRIH_STRGR 3-amino-4-hydroxybenzoic acid synthase OS=Streptomyces griseus
GN=griH PE=1 SV=1
Length = 396
Score = 38.9 bits (89), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Query: 142 DWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLALKE 201
D IP E ++A+ + ++ I++ EA+I LE G G+++ + V LK
Sbjct: 148 DPTKIPLEIVIAAAARASGSMVTIAQDLEEAEILFGVLEHGSDGVMMAPKTVGDAAELKR 207
Query: 202 YFDGRNEVSNLLSLMKATVTRVDVAGMGDRVCVD 235
+ + N L+L + V GMG+R CVD
Sbjct: 208 IAEAG--IPN-LNLTELRVVETSHIGMGERACVD 238
>sp|B1VTI7|GRIH_STRGG 3-amino-4-hydroxybenzoic acid synthase OS=Streptomyces griseus
subsp. griseus (strain JCM 4626 / NBRC 13350) GN=griH
PE=3 SV=1
Length = 396
Score = 38.9 bits (89), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Query: 142 DWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLALKE 201
D IP E ++A+ + ++ I++ EA+I LE G G+++ + V LK
Sbjct: 148 DPTKIPLEIVIAAAARASGSMVTIAQDLEEAEILFGVLEHGSDGVMMAPKTVGDAAELKR 207
Query: 202 YFDGRNEVSNLLSLMKATVTRVDVAGMGDRVCVD 235
+ + N L+L + V GMG+R CVD
Sbjct: 208 IAEAG--IPN-LNLTELRVVETSHIGMGERACVD 238
>sp|B0TM50|MTNC_SHEHH Enolase-phosphatase E1 OS=Shewanella halifaxensis (strain HAW-EB4)
GN=mtnC PE=3 SV=1
Length = 225
Score = 33.1 bits (74), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 43/94 (45%), Gaps = 7/94 (7%)
Query: 5 LSSSFVSSTQLPFSTFN----TDKWNTG---RVNKNSYCFTMCSVSNSSSSKPKRVWIWT 57
SS V + +L FS + DK+N R + C++ N+ S PK++ +
Sbjct: 125 FSSGSVEAQKLLFSHSDAGDLNDKFNGHFDTRTGNKRFKQAYCNIVNTISLSPKQILFVS 184
Query: 58 ESKQVMTAAVERGWNTFVFLSENQQLAIDWSTIA 91
+ + + AA E G N + ++ Q D+ TI+
Sbjct: 185 DVLEELKAASEAGLNVVQMVRDDSQRTGDFKTIS 218
>sp|B8CGX4|MTNC_SHEPW Enolase-phosphatase E1 OS=Shewanella piezotolerans (strain WP3 /
JCM 13877) GN=mtnC PE=3 SV=1
Length = 225
Score = 32.7 bits (73), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 42/94 (44%), Gaps = 7/94 (7%)
Query: 5 LSSSFVSSTQLPFSTFN----TDKWNTG---RVNKNSYCFTMCSVSNSSSSKPKRVWIWT 57
SS V + +L F + TDK+N R + C++ N+ S PK++ +
Sbjct: 125 FSSGSVDAQKLLFGNSDAGDLTDKFNGHFDTRTGNKRFKQAYCNILNTISLSPKQILFVS 184
Query: 58 ESKQVMTAAVERGWNTFVFLSENQQLAIDWSTIA 91
+ + + AA E G N + ++ Q D+ I+
Sbjct: 185 DVLEELKAASEAGLNVLQMVRQDNQRTGDFKQIS 218
>sp|P02640|VILI_CHICK Villin-1 OS=Gallus gallus GN=VIL1 PE=1 SV=2
Length = 826
Score = 32.0 bits (71), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 48/109 (44%), Gaps = 22/109 (20%)
Query: 60 KQVMTAAVERGWNTF----VFLSENQQLAIDWS-----------TIALLDPLFIKEGEVY 104
K V+ A VE W +F VFL + QL I W+ + L + +E
Sbjct: 146 KNVVAAEVEMSWKSFNLGDVFLLDLGQLIIQWNGPESNRAERLRAMTLAKDIRDRE---- 201
Query: 105 DSGDRRVGSII---EVSTPQELQQLQPADGQAENIVIDLPDWQVIPAEN 150
+G +VG + E ++P+ +Q L G+ +NI PD QV A N
Sbjct: 202 RAGRAKVGVVEGENEAASPELMQALTHVLGEKKNIKAATPDEQVHQALN 250
>sp|Q8DKF1|GSHB_THEEB Glutathione synthetase OS=Thermosynechococcus elongatus (strain
BP-1) GN=gshB PE=3 SV=1
Length = 318
Score = 31.2 bits (69), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 15/99 (15%)
Query: 90 IALLDPLFIKEGE---VYDSGDRRVGSIIEVST-----PQELQQLQPADGQAENIVIDLP 141
+A+L PL K GE +GDR + S+IE+ST P LQ+ PA + + +I L
Sbjct: 164 MAVLKPLGGKGGEGILFLQAGDRNLNSMIEISTQRGQLPVMLQEYLPAAKEGDKRIILL- 222
Query: 142 DWQVIPAENIVAS---FQG---SGKTVFAISKTPSEAQI 174
+ + I A N + + F+G +G V A T + QI
Sbjct: 223 NGEPIGAVNRIPTGDEFRGNMATGGRVAAAEITERDRQI 261
>sp|Q8K4J0|DCR1C_MOUSE Protein artemis OS=Mus musculus GN=Dclre1c PE=2 SV=2
Length = 705
Score = 30.8 bits (68), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 57/125 (45%), Gaps = 30/125 (24%)
Query: 115 IEVSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVAS----FQGSGKTV-----FAI 165
IE+ TP ++ + A G+ E +V+ L +PA + S FQGS TV F +
Sbjct: 85 IEIETPTQISLVDEASGEKEEVVVTL-----LPAGHCPGSVMFLFQGSNGTVLYTGDFRL 139
Query: 166 SKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLALKEYFDGR--------NEVSNLLSLMK 217
+K + L + GG +V+D+++V + D R + +L L++
Sbjct: 140 AKGEASRMELLHS-----GG---RVKDIQSVYLDTTFCDPRFYQIPSREQCLRGILELVR 191
Query: 218 ATVTR 222
+ VTR
Sbjct: 192 SWVTR 196
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.132 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 88,478,182
Number of Sequences: 539616
Number of extensions: 3474127
Number of successful extensions: 9002
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 8921
Number of HSP's gapped (non-prelim): 57
length of query: 247
length of database: 191,569,459
effective HSP length: 114
effective length of query: 133
effective length of database: 130,053,235
effective search space: 17297080255
effective search space used: 17297080255
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)