Your job contains 1 sequence.
>025859
MSQSNDSSNPEEKEHDLESIFQQKRILRSQVRKTLKSMDPSLRSHEDNAIQKIVLEAPWF
KSSQRLCAYISCSALREVDTSKLLSQILQIPNADGDTKTRKKLYVPRVEDKNSHMRMFHI
SSIDDLIANSMNILEPAPVDADGNEREDVMQANEPVDLFLLPGLAFDRSGRRLGRGGGYY
DTFLKKYQELAKERNWRQPLFVALSYSLQIMDEGIISATPKDMPVDALVSPSGVIPISAA
ALDRMQF
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 025859
(247 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2179827 - symbol:5-FCL "5-formyltetrahydrofola... 792 8.7e-79 1
UNIPROTKB|F1NWN8 - symbol:MTHFS "Uncharacterized protein"... 190 5.4e-15 1
FB|FBgn0085453 - symbol:CG34424 species:7227 "Drosophila ... 180 6.2e-14 1
POMBASE|SPBC1703.08c - symbol:SPBC1703.08c "5-formyltetra... 177 1.3e-13 1
RGD|1306876 - symbol:Mthfs "5,10-methenyltetrahydrofolate... 167 1.5e-12 1
UNIPROTKB|P49914 - symbol:MTHFS "5-formyltetrahydrofolate... 165 2.4e-12 1
UNIPROTKB|P80405 - symbol:MTHFS "5-formyltetrahydrofolate... 165 2.4e-12 1
MGI|MGI:1340032 - symbol:Mthfs "5, 10-methenyltetrahydrof... 164 3.1e-12 1
UNIPROTKB|E2RR20 - symbol:MTHFS "Uncharacterized protein"... 158 1.3e-11 1
SGD|S000000985 - symbol:FAU1 "5,10-methenyltetrahydrofola... 141 2.1e-08 1
UNIPROTKB|H3BQ75 - symbol:MTHFS "5-formyltetrahydrofolate... 130 4.4e-08 1
UNIPROTKB|Q1RMT3 - symbol:MTHFS "5,10-methenyltetrahydrof... 135 1.0e-07 1
WB|WBGene00013708 - symbol:Y106G6E.4 species:6239 "Caenor... 134 1.8e-07 1
CGD|CAL0002688 - symbol:orf19.4523 species:5476 "Candida ... 127 1.7e-06 1
TIGR_CMR|CHY_0730 - symbol:CHY_0730 "5,10-methenyltetrahy... 123 3.5e-06 1
TIGR_CMR|CBU_0066 - symbol:CBU_0066 "5-formyltetrahydrofo... 106 0.00063 1
>TAIR|locus:2179827 [details] [associations]
symbol:5-FCL "5-formyltetrahydrofolate cycloligase"
species:3702 "Arabidopsis thaliana" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0009396
"folic acid-containing compound biosynthetic process" evidence=IEA]
[GO:0030272 "5-formyltetrahydrofolate cyclo-ligase activity"
evidence=IEA;IGI;IDA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0046653 "tetrahydrofolate metabolic process" evidence=IMP]
InterPro:IPR002698 Pfam:PF01812 GO:GO:0005524 EMBL:CP002688
GO:GO:0009396 GO:GO:0046653 GO:GO:0030272 Gene3D:3.40.50.10420
InterPro:IPR024185 PANTHER:PTHR23407:SF1 TIGRFAMs:TIGR02727
HOGENOM:HOG000007299 OMA:NENDMKV UniGene:At.20443 UniGene:At.71082
EMBL:AY084396 EMBL:AF516365 EMBL:BT024502 IPI:IPI00538119
RefSeq:NP_568284.1 ProteinModelPortal:Q8L539 SMR:Q8L539
PRIDE:Q8L539 EnsemblPlants:AT5G13050.1 GeneID:831144
KEGG:ath:AT5G13050 TAIR:At5g13050 InParanoid:Q8L539
PhylomeDB:Q8L539 ProtClustDB:PLN02812 BRENDA:6.3.3.2
SABIO-RK:Q8L539 Genevestigator:Q8L539 Uniprot:Q8L539
Length = 277
Score = 792 (283.9 bits), Expect = 8.7e-79, P = 8.7e-79
Identities = 156/245 (63%), Positives = 193/245 (78%)
Query: 1 MSQSNDSSNPEEKEHDLESIFQQKRILRSQVRKTLKSMDPSLRSHEDNAIQKIVLEAPWF 60
++ S S N EE L+SIF+QKR++RS VRK+LK+MDPSLR+ +D AIQK VLEAPWF
Sbjct: 41 VAMSTTSKNQEE----LDSIFKQKRVVRSTVRKSLKAMDPSLRTQQDEAIQKTVLEAPWF 96
Query: 61 KSSQRLCAYISCSALREVDTSKLLSQILQIPNADGDTKTRKKLYVPRVEDKNSHMRMFHI 120
KS + LCAYISC +L EVDTSK+LS+ILQ P D+ T+KKLYVP VEDKNS+MRM HI
Sbjct: 97 KSCKGLCAYISCKSLNEVDTSKILSEILQHP----DSNTQKKLYVPWVEDKNSNMRMLHI 152
Query: 121 SSIDDLIANSMNILEPAPVDADGNEREDVMQANEPVDLFLLPGLAFDXXXXXXXXXXXYY 180
S ++DL+ANSMNILEPAPVDA GN+REDV+QA+EP+DLF+LPGLAFD YY
Sbjct: 153 SHMEDLVANSMNILEPAPVDAQGNDREDVLQADEPIDLFILPGLAFDRCGRRLGRGGGYY 212
Query: 181 DTFLKKYQELAKERNWRQPLFVALSYSLQIMDEGIISATPKDMPVDALVSPSGVIPISAA 240
DTFLK+YQ+ AKE+ WR PL VALSYS QI+++G I TP D+ +DALV+PSGV+PI+
Sbjct: 213 DTFLKRYQDRAKEKGWRYPLMVALSYSPQILEDGSIPVTPNDVLIDALVTPSGVVPITPR 272
Query: 241 ALDRM 245
A + M
Sbjct: 273 ATESM 277
>UNIPROTKB|F1NWN8 [details] [associations]
symbol:MTHFS "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0009396 "folic
acid-containing compound biosynthetic process" evidence=IEA]
[GO:0030272 "5-formyltetrahydrofolate cyclo-ligase activity"
evidence=IEA] InterPro:IPR002698 Pfam:PF01812 PIRSF:PIRSF006806
GO:GO:0005524 GO:GO:0009396 GO:GO:0030272 Gene3D:3.40.50.10420
InterPro:IPR024185 PANTHER:PTHR23407:SF1 TIGRFAMs:TIGR02727
GeneTree:ENSGT00390000017791 OMA:NENDMKV EMBL:AADN02041538
IPI:IPI00572600 Ensembl:ENSGALT00000010528 Uniprot:F1NWN8
Length = 201
Score = 190 (71.9 bits), Expect = 5.4e-15, P = 5.4e-15
Identities = 54/209 (25%), Positives = 104/209 (49%)
Query: 24 KRILRSQVRKTLKSMDPSLRSHEDNAIQKIVLEAPWFKSSQRLCAYISCSALREVDTSKL 83
KR LR+++R+ L+++ + + + + + V+ ++ S+R+ ++S E+ T ++
Sbjct: 10 KRALRTELRQKLRALGAAEKQRQSRLLSRKVIGHSKYQESKRIAIFLSMPD--EIQTEEI 67
Query: 84 LSQILQIPNADGDTKTRKKLYVPRVEDKNSHMRMFHISSIDD---LIANSMNILEPAPVD 140
+ I K K+ ++PR + ++HM M +SS +D L S NIL+P+
Sbjct: 68 IKDIF---------KQGKECFIPRYKPHSNHMDMLKLSSAEDISSLTLTSWNILQPSD-- 116
Query: 141 ADGNEREDVMQANEPVDLFLLPGLAFDXXXXXXXXXXXYYDTFLKKYQELAKERNWRQPL 200
D + RE+ + A +DL +PGL FD YYDT+L + + + P
Sbjct: 117 -DDSAREEAL-AGGGLDLIFMPGLGFDKKGNRLGRGKGYYDTYLGRCMKHPSGK----PY 170
Query: 201 FVALSYSLQIMDEGIISATPKDMPVDALV 229
+AL++ QI + + T D+ VD ++
Sbjct: 171 TIALAFREQICES--VPVTENDVQVDEIL 197
>FB|FBgn0085453 [details] [associations]
symbol:CG34424 species:7227 "Drosophila melanogaster"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0009396 "folic
acid-containing compound biosynthetic process" evidence=IEA]
[GO:0005829 "cytosol" evidence=ISS] [GO:0030272
"5-formyltetrahydrofolate cyclo-ligase activity" evidence=ISS]
InterPro:IPR002698 Pfam:PF01812 PIRSF:PIRSF006806 EMBL:AE013599
GO:GO:0005524 GO:GO:0009396 GO:GO:0030272 Gene3D:3.40.50.10420
InterPro:IPR024185 PANTHER:PTHR23407:SF1 TIGRFAMs:TIGR02727
GeneTree:ENSGT00390000017791 OMA:NENDMKV RefSeq:NP_001097432.1
UniGene:Dm.35904 ProteinModelPortal:Q8MLS1 SMR:Q8MLS1 STRING:Q8MLS1
PRIDE:Q8MLS1 EnsemblMetazoa:FBtr0112725 GeneID:37699
KEGG:dme:Dmel_CG34424 UCSC:CG34424-RA FlyBase:FBgn0085453
InParanoid:Q8MLS1 OrthoDB:EOG4SXKVP PhylomeDB:Q8MLS1
GenomeRNAi:37699 NextBio:804960 Bgee:Q8MLS1 Uniprot:Q8MLS1
Length = 201
Score = 180 (68.4 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 57/208 (27%), Positives = 103/208 (49%)
Query: 24 KRILRSQVRKTLKSMDPSLRSHEDNAIQKIVLEAPWFKSSQRLCAYISCSALREVDTSKL 83
K LR +++ LK +D + + A+ VL++ F+ +QR+ Y+S ++ E+DT+ L
Sbjct: 10 KVALRKRMKDALKGIDAEAIARQSQAVTAKVLQSEIFRQAQRVSIYLSTAS--ELDTTAL 67
Query: 84 LSQILQIPNADGDTKTRKKLYVPRVEDKNSHM-RMFHISSIDDLIANSMNILEPAPVDAD 142
LS++ ++ K ++VP E M R+ + + L NI +P +A
Sbjct: 68 LSEMFRL---------EKMVFVPTYEGSRMKMVRLRGMEEYESLPLTKWNIKQPDFKEA- 117
Query: 143 GNEREDVMQANEPVDLFLLPGLAFDXXXXXXXXXXXYYDTFLKKYQELAKERNWRQPLFV 202
RED M +DLF++PG+AF YYD FLK++ E K + + L +
Sbjct: 118 ---REDAMTNGHGIDLFIVPGVAFTRCGARMGHGMGYYDKFLKQHAE--KYPHKKISL-M 171
Query: 203 ALSYSLQIMDEGIISATPKDMPVDALVS 230
ALS + QI+ + D+ + ++++
Sbjct: 172 ALSLNEQIVSNEELPMESHDVRLHSVIT 199
>POMBASE|SPBC1703.08c [details] [associations]
symbol:SPBC1703.08c "5-formyltetrahydrofolate
cyclo-ligase (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISS;IDA] [GO:0009396 "folic acid-containing compound
biosynthetic process" evidence=ISS] [GO:0030272
"5-formyltetrahydrofolate cyclo-ligase activity" evidence=ISS]
InterPro:IPR002698 Pfam:PF01812 PIRSF:PIRSF006806
PomBase:SPBC1703.08c GO:GO:0005739 GO:GO:0005524 EMBL:CU329671
GO:GO:0009396 PIR:T50321 RefSeq:NP_596203.1
ProteinModelPortal:Q9P7W2 STRING:Q9P7W2 EnsemblFungi:SPBC1703.08c.1
GeneID:2539626 KEGG:spo:SPBC1703.08c eggNOG:COG0212 KO:K01934
OMA:RNATNIM OrthoDB:EOG4P8JTG NextBio:20800782 GO:GO:0030272
Gene3D:3.40.50.10420 InterPro:IPR024185 PANTHER:PTHR23407:SF1
TIGRFAMs:TIGR02727 Uniprot:Q9P7W2
Length = 204
Score = 177 (67.4 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 59/216 (27%), Positives = 99/216 (45%)
Query: 23 QKRILRSQVRKTLKSMDPSLRSHEDNAIQKIVLEAPWFKSSQRLCAYISCSALREVDTSK 82
+K LR+ + +L + + + +I K V+E P +K + +C Y++ +EV T
Sbjct: 4 KKNQLRAILNSSLGKLADHIIDSQSISICKQVVELPEWKRCKNVCLYMNMPK-KEVRTRC 62
Query: 83 LLSQILQIPNADGDTKTRKKLYVPRVEDKNSH-MRMFHI-SSIDDLIANSMNILEPAPVD 140
L+ D K K +++P+ SH M M+ + + L N I EP
Sbjct: 63 LI---------DVAFKEGKNVFIPKCI--GSHVMEMYQVFEKTESLTINKWGIAEP---- 107
Query: 141 ADGNEREDVMQANEPVDLFLLPGLAFDXXXXXXXXXXXYYDTFLKKYQELAKERNWRQPL 200
+G R+ +M +L ++PG+AFD YYD ++ KYQ A ++ R +
Sbjct: 108 -NGESRK-IMDDETDCELIIVPGVAFDEKLSRLGHGKGYYDNYISKYQSWALQKESRANM 165
Query: 201 F-VALSYSLQIMDEGIISATPKDMPVDALVSPSGVI 235
F V + QI+ I +D +DALV+P VI
Sbjct: 166 FKVGICLKEQILPNREIPMDTRDQKLDALVTPEKVI 201
>RGD|1306876 [details] [associations]
symbol:Mthfs "5,10-methenyltetrahydrofolate synthetase
(5-formyltetrahydrofolate cyclo-ligase)" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005739 "mitochondrion" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0009396 "folic acid-containing compound biosynthetic process"
evidence=IEA] [GO:0030272 "5-formyltetrahydrofolate cyclo-ligase
activity" evidence=IEA;ISO] [GO:0046653 "tetrahydrofolate metabolic
process" evidence=ISO] InterPro:IPR002698 Pfam:PF01812
PIRSF:PIRSF006806 RGD:1306876 GO:GO:0005524 EMBL:CH473954
GO:GO:0009396 KO:K01934 GO:GO:0030272 Gene3D:3.40.50.10420
InterPro:IPR024185 PANTHER:PTHR23407:SF1 TIGRFAMs:TIGR02727
GeneTree:ENSGT00390000017791 HOGENOM:HOG000007299 CTD:10588
HOVERGEN:HBG052525 OMA:YRQLAQH eggNOG:NOG271145 EMBL:BC087144
IPI:IPI00373511 RefSeq:NP_001009349.1 UniGene:Rn.2215 STRING:Q5M9F6
Ensembl:ENSRNOT00000017879 GeneID:300886 KEGG:rno:300886
UCSC:RGD:1306876 InParanoid:Q5M9F6 NextBio:647698
Genevestigator:Q5M9F6 Uniprot:Q5M9F6
Length = 203
Score = 167 (63.8 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 53/209 (25%), Positives = 104/209 (49%)
Query: 24 KRILRSQVRKTLKSMDPSLRSHEDNAIQKIVLEAPWFKSSQRLCAYISCSALREVDTSKL 83
KR LR+++++ L+++ R + + + + V+ +++S+R+ ++S E++T ++
Sbjct: 10 KRGLRAELKQRLRALGAEERLRQSHLLTQKVIAHSQYQNSKRISIFLSMQD--EIETEEI 67
Query: 84 LSQILQIPNADGDTKTRKKLYVPRVEDKNSHMRMFHISSIDD---LIANSMNILEPAPVD 140
+ I K K ++PR + ++HM M +++ ++ L S NI +P
Sbjct: 68 IKDIF---------KQGKICFIPRYQFHSNHMDMVRLTAPEEVALLPKTSWNIHQPG--- 115
Query: 141 ADGNEREDVMQANEPVDLFLLPGLAFDXXXXXXXXXXXYYDTFLKKYQELAKERNWRQPL 200
+G+ RE+ + +DL LPGL FD YYDT+LK+ + K + P
Sbjct: 116 -EGDVREEALSTGG-LDLIFLPGLGFDKDGNRLGRGKGYYDTYLKRCVQHQKVK----PY 169
Query: 201 FVALSYSLQIMDEGIISATPKDMPVDALV 229
+AL++ QI + I DM VD ++
Sbjct: 170 TLALAFREQICPQ--IPVDEHDMKVDEVL 196
>UNIPROTKB|P49914 [details] [associations]
symbol:MTHFS "5-formyltetrahydrofolate cyclo-ligase"
species:9606 "Homo sapiens" [GO:0009396 "folic acid-containing
compound biosynthetic process" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005542 "folic acid binding"
evidence=IEA] [GO:0015942 "formate metabolic process" evidence=NAS]
[GO:0030272 "5-formyltetrahydrofolate cyclo-ligase activity"
evidence=IDA;NAS] [GO:0005829 "cytosol" evidence=NAS] [GO:0046653
"tetrahydrofolate metabolic process" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR002698 Pfam:PF01812 PIRSF:PIRSF006806 GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 GO:GO:0005794 GO:GO:0009396
GO:GO:0046653 GO:GO:0015942 GO:GO:0005542 eggNOG:COG0212 KO:K01934
GO:GO:0030272 Gene3D:3.40.50.10420 InterPro:IPR024185
PANTHER:PTHR23407:SF1 TIGRFAMs:TIGR02727 HOGENOM:HOG000007299
OMA:NENDMKV EMBL:L38928 EMBL:BC019921 IPI:IPI00220567 PIR:JC4389
RefSeq:NP_001186687.1 RefSeq:NP_006432.1 UniGene:Hs.194294
UniGene:Hs.459049 PDB:3HXT PDB:3HY3 PDB:3HY4 PDB:3HY6 PDBsum:3HXT
PDBsum:3HY3 PDBsum:3HY4 PDBsum:3HY6 ProteinModelPortal:P49914
SMR:P49914 IntAct:P49914 STRING:P49914 PhosphoSite:P49914
DMDM:1706921 PaxDb:P49914 PRIDE:P49914 Ensembl:ENST00000258874
GeneID:10588 KEGG:hsa:10588 UCSC:uc002bex.4 CTD:10588
GeneCards:GC15M080125 HGNC:HGNC:7437 HPA:HPA008067 MIM:604197
neXtProt:NX_P49914 PharmGKB:PA31239 HOVERGEN:HBG052525
InParanoid:P49914 OrthoDB:EOG4BG8X3 PhylomeDB:P49914
EvolutionaryTrace:P49914 GenomeRNAi:10588 NextBio:40207
ArrayExpress:P49914 Bgee:P49914 CleanEx:HS_MTHFS
Genevestigator:P49914 GermOnline:ENSG00000136371 Uniprot:P49914
Length = 203
Score = 165 (63.1 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 53/215 (24%), Positives = 103/215 (47%)
Query: 19 SIFQQKRILRSQVRKTLKSMDPSLRSHEDNAIQKIVLEAPWFKSSQRLCAYISCSALREV 78
++ KR LR ++++ L++M R + + + V+ ++ S+R+ ++S E+
Sbjct: 5 AVSSAKRSLRGELKQRLRAMSAEERLRQSRVLSQKVIAHSEYQKSKRISIFLSMQD--EI 62
Query: 79 DTSKLLSQILQIPNADGDTKTRKKL-YVPRVEDKNSHMRMFHISSIDD---LIANSMNIL 134
+T +++ I Q R K+ ++PR +++HM M I S ++ L S NI
Sbjct: 63 ETEEIIKDIFQ----------RGKICFIPRYRFQSNHMDMVRIESPEEISLLPKTSWNIP 112
Query: 135 EPAPVDADGNEREDVMQANEPVDLFLLPGLAFDXXXXXXXXXXXYYDTFLKKYQELAKER 194
+P +G+ RE+ + +DL +PGL FD YYD +LK+ + + +
Sbjct: 113 QPG----EGDVREEALSTGG-LDLIFMPGLGFDKHGNRLGRGKGYYDAYLKRCLQHQEVK 167
Query: 195 NWRQPLFVALSYSLQIMDEGIISATPKDMPVDALV 229
P +AL++ QI + + DM VD ++
Sbjct: 168 ----PYTLALAFKEQICLQ--VPVNENDMKVDEVL 196
>UNIPROTKB|P80405 [details] [associations]
symbol:MTHFS "5-formyltetrahydrofolate cyclo-ligase"
species:9986 "Oryctolagus cuniculus" [GO:0030272
"5-formyltetrahydrofolate cyclo-ligase activity" evidence=ISS]
[GO:0046653 "tetrahydrofolate metabolic process" evidence=ISS]
InterPro:IPR002698 Pfam:PF01812 PIRSF:PIRSF006806 GO:GO:0005524
GO:GO:0005737 GO:GO:0009396 GO:GO:0046653 GO:GO:0005542
GO:GO:0030272 Gene3D:3.40.50.10420 InterPro:IPR024185
PANTHER:PTHR23407:SF1 TIGRFAMs:TIGR02727 HOVERGEN:HBG052525
PIR:A53688 ProteinModelPortal:P80405 STRING:P80405 eggNOG:NOG271145
Uniprot:P80405
Length = 201
Score = 165 (63.1 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 53/209 (25%), Positives = 104/209 (49%)
Query: 24 KRILRSQVRKTLKSMDPSLRSHEDNAIQKIVLEAPWFKSSQRLCAYISCSALREVDTSKL 83
KR LR+++++ L+++ R + + V+ ++ SQR+ ++S E++T ++
Sbjct: 10 KRSLRAELKQRLRAISAEERLRCQRLLTQKVIAHRQYQKSQRISIFLSMPD--EIETEEI 67
Query: 84 LSQILQIPNADGDTKTRKKLYVPRVEDKNSHMRMFHISSIDDLIA---NSMNILEPAPVD 140
+ I Q G K ++PR +++HM M ++S D++ + S NI +P+ D
Sbjct: 68 IKDIFQ----QG-----KVCFIPRYRLQSNHMDMVKLASADEISSLPKTSWNIHQPSESD 118
Query: 141 ADGNEREDVMQANEPVDLFLLPGLAFDXXXXXXXXXXXYYDTFLKKYQELAKERNWRQPL 200
RE+ + A +DL +PGL FD YYDT+L++ ++ +P
Sbjct: 119 T----REEAL-ATGGLDLIFMPGLGFDRNGNRLGRGRGYYDTYLQR----CLQQQGAKPY 169
Query: 201 FVALSYSLQIMDEGIISATPKDMPVDALV 229
+AL++ QI + + T D+ VD ++
Sbjct: 170 TIALAFREQICPQVPVDDT--DVSVDEVL 196
>MGI|MGI:1340032 [details] [associations]
symbol:Mthfs "5, 10-methenyltetrahydrofolate synthetase"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005542
"folic acid binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0009396
"folic acid-containing compound biosynthetic process" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0030272
"5-formyltetrahydrofolate cyclo-ligase activity" evidence=ISO]
[GO:0046653 "tetrahydrofolate metabolic process" evidence=ISO]
InterPro:IPR002698 Pfam:PF01812 PIRSF:PIRSF006806 MGI:MGI:1340032
GO:GO:0005739 GO:GO:0005524 GO:GO:0009396 GO:GO:0046653
GO:GO:0005542 eggNOG:COG0212 KO:K01934 GO:GO:0030272
Gene3D:3.40.50.10420 InterPro:IPR024185 PANTHER:PTHR23407:SF1
TIGRFAMs:TIGR02727 GeneTree:ENSGT00390000017791
HOGENOM:HOG000007299 CTD:10588 HOVERGEN:HBG052525 EMBL:AK004092
EMBL:CT030686 EMBL:AC135634 IPI:IPI00225395 RefSeq:NP_081105.1
UniGene:Mm.486274 ProteinModelPortal:Q9D110 SMR:Q9D110
STRING:Q9D110 PhosphoSite:Q9D110 PaxDb:Q9D110 PRIDE:Q9D110
Ensembl:ENSMUST00000085256 GeneID:107885 KEGG:mmu:107885
UCSC:uc009qzk.1 InParanoid:B2KF82 OMA:YRQLAQH NextBio:359643
Bgee:Q9D110 Genevestigator:Q9D110 GermOnline:ENSMUSG00000066442
Uniprot:Q9D110
Length = 203
Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 53/209 (25%), Positives = 103/209 (49%)
Query: 24 KRILRSQVRKTLKSMDPSLRSHEDNAIQKIVLEAPWFKSSQRLCAYISCSALREVDTSKL 83
KR LR+++++ L+++ R + + + V+ +++S+R+ ++S EV+T +
Sbjct: 10 KRGLRAELKQRLRALSAEERLRQSLLLTQKVIAHNQYQNSKRISIFLSMQD--EVETEVI 67
Query: 84 LSQILQIPNADGDTKTRKKLYVPRVEDKNSHMRMFHISSIDDLIA---NSMNILEPAPVD 140
+ I K K ++PR + +++HM M ++S +++ S NI +P
Sbjct: 68 IKDIF---------KQGKICFIPRYQFQSNHMDMVRLTSSEEIALLPKTSWNIHQPG--- 115
Query: 141 ADGNEREDVMQANEPVDLFLLPGLAFDXXXXXXXXXXXYYDTFLKKYQELAKERNWRQPL 200
+G+ RE+ + +DL LPGL FD YYDT+LK+ + + + P
Sbjct: 116 -EGDVREEALSTGG-LDLIFLPGLGFDKDGNRLGRGKGYYDTYLKRCVQHQEVK----PY 169
Query: 201 FVALSYSLQIMDEGIISATPKDMPVDALV 229
+AL++ QI + I DM VD ++
Sbjct: 170 TMALAFKEQICPQ--IPVDEHDMKVDEVL 196
>UNIPROTKB|E2RR20 [details] [associations]
symbol:MTHFS "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030272 "5-formyltetrahydrofolate
cyclo-ligase activity" evidence=IEA] [GO:0009396 "folic
acid-containing compound biosynthetic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR002698
Pfam:PF01812 PIRSF:PIRSF006806 GO:GO:0005524 GO:GO:0009396
GO:GO:0030272 Gene3D:3.40.50.10420 InterPro:IPR024185
PANTHER:PTHR23407:SF1 TIGRFAMs:TIGR02727
GeneTree:ENSGT00390000017791 OMA:YRQLAQH EMBL:AAEX03002384
ProteinModelPortal:E2RR20 Ensembl:ENSCAFT00000022189 Uniprot:E2RR20
Length = 203
Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 51/214 (23%), Positives = 101/214 (47%)
Query: 19 SIFQQKRILRSQVRKTLKSMDPSLRSHEDNAIQKIVLEAPWFKSSQRLCAYISCSALREV 78
++ KR LR+++++ L++M R + + + V+ ++ S+R+ ++S E+
Sbjct: 6 AVSSAKRSLRAELKQRLRAMSAEERLRQSRLLAQKVIAHSQYQKSKRISIFLSMHD--EI 63
Query: 79 DTSKLLSQILQIPNADGDTKTRKKLYVPRVEDKNSHMRMFHISS---IDDLIANSMNILE 135
+T +++ I Q G T ++PR + +++HM M ++S I L S NI +
Sbjct: 64 ETEEIIRDIFQ----QGKT-----CFIPRYQFRSNHMDMVKLASPEEISSLPKTSWNIHQ 114
Query: 136 PAPVDADGNEREDVMQANEPVDLFLLPGLAFDXXXXXXXXXXXYYDTFLKKYQELAKERN 195
P + RE+ + +DL +PGL FD YYD +L++ ++
Sbjct: 115 PG----EDEVREEALSTGG-LDLIFMPGLGFDKHGNRLGRGRGYYDAYLRR----CLQQQ 165
Query: 196 WRQPLFVALSYSLQIMDEGIISATPKDMPVDALV 229
P +AL++ QI + + DM VD ++
Sbjct: 166 DVPPYTMALAFREQICPQ--VPVDENDMKVDEVL 197
>SGD|S000000985 [details] [associations]
symbol:FAU1 "5,10-methenyltetrahydrofolate synthetase"
species:4932 "Saccharomyces cerevisiae" [GO:0005739 "mitochondrion"
evidence=IEA;IDA] [GO:0030272 "5-formyltetrahydrofolate
cyclo-ligase activity" evidence=IEA;IDA] [GO:0009396 "folic
acid-containing compound biosynthetic process" evidence=IEA;IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
InterPro:IPR002698 Pfam:PF01812 PIRSF:PIRSF006806 SGD:S000000985
GO:GO:0005739 GO:GO:0005524 EMBL:BK006939 EMBL:U18922 GO:GO:0009396
eggNOG:COG0212 KO:K01934 OrthoDB:EOG4P8JTG GO:GO:0030272
Gene3D:3.40.50.10420 InterPro:IPR024185 PANTHER:PTHR23407:SF1
TIGRFAMs:TIGR02727 PIR:S50686 RefSeq:NP_011110.1
ProteinModelPortal:P40099 SMR:P40099 IntAct:P40099 STRING:P40099
PaxDb:P40099 EnsemblFungi:YER183C GeneID:856932 KEGG:sce:YER183C
CYGD:YER183c GeneTree:ENSGT00390000017791 HOGENOM:HOG000007299
OMA:CTHTSES NextBio:983412 Genevestigator:P40099 GermOnline:YER183C
Uniprot:P40099
Length = 211
Score = 141 (54.7 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 54/220 (24%), Positives = 100/220 (45%)
Query: 24 KRILRSQVRKTLKSMDPSLRSHEDNAIQKIVLEAPWFKSSQRLCAYISCSALREVDTSKL 83
K++LR Q+++ + ++D + + E + I + V +S+R+ Y+S EV T ++
Sbjct: 4 KQLLRRQIKRVINALDYDIIAAESHTISQAVRSLIASANSRRVACYMSMDK-GEVTTGEI 62
Query: 84 LSQILQ------IPNADGDTKTRKKLYVPRVEDKNSHMRMFHISSIDDLIANSMNILEP- 136
+ + Q +P T T + + ED + H+ +FH S ++ + L+P
Sbjct: 63 IKNLFQDGQEVFLPRC---THTSESKHFKLREDHHPHL-IFHRMSSLKMVRD----LKPQ 114
Query: 137 APVDADGNEREDVMQANEPVDLFLLPGLAFDXXXXXXXXXXX-YYDTFLKKYQELAKERN 195
P E E ++ ++ +D+ L+PG+AFD YYD F ++Y+ L
Sbjct: 115 GPYQL--KEPEPHIEESDILDVVLVPGVAFDIKTGARMGHGAGYYDDFFQRYKIL---HE 169
Query: 196 WRQPLFVALSYSLQIMDEGIISATPKDMPVDALVSPSGVI 235
++PL V L Q+ I D +D +V G I
Sbjct: 170 GQKPLLVGLCLMEQVASP--IPLEKHDYSMDCIVCGDGSI 207
>UNIPROTKB|H3BQ75 [details] [associations]
symbol:MTHFS "5-formyltetrahydrofolate cyclo-ligase"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0009396 "folic acid-containing compound biosynthetic process"
evidence=IEA] [GO:0030272 "5-formyltetrahydrofolate cyclo-ligase
activity" evidence=IEA] InterPro:IPR002698 Pfam:PF01812
PIRSF:PIRSF006806 GO:GO:0005524 EMBL:AC015871 GO:GO:0009396
GO:GO:0030272 Gene3D:3.40.50.10420 InterPro:IPR024185
PANTHER:PTHR23407:SF1 TIGRFAMs:TIGR02727 UniGene:Hs.459049
EMBL:AC021483 RefSeq:NP_001186689.1 ProteinModelPortal:H3BQ75
SMR:H3BQ75 PRIDE:H3BQ75 Ensembl:ENST00000479961 GeneID:100528021
KEGG:hsa:100528021 CTD:100528021 GenomeRNAi:100528021 Bgee:H3BQ75
Uniprot:H3BQ75
Length = 179
Score = 130 (50.8 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 45/174 (25%), Positives = 83/174 (47%)
Query: 60 FKSSQRLCAYISCSALREVDTSKLLSQILQIPNADGDTKTRKKL-YVPRVEDKNSHMRMF 118
++ S+R+ ++S E++T +++ I Q R K+ ++PR +++HM M
Sbjct: 22 YQKSKRISIFLSMQD--EIETEEIIKDIFQ----------RGKICFIPRYRFQSNHMDMV 69
Query: 119 HISSIDD---LIANSMNILEPAPVDADGNEREDVMQANEPVDLFLLPGLAFDXXXXXXXX 175
I S ++ L S NI +P +G+ RE+ + +DL +PGL FD
Sbjct: 70 RIESPEEISLLPKTSWNIPQPG----EGDVREEALSTGG-LDLIFMPGLGFDKHGNRLGR 124
Query: 176 XXXYYDTFLKKYQELAKERNWRQPLFVALSYSLQIMDEGIISATPKDMPVDALV 229
YYD +LK+ + + + P +AL++ QI + + DM VD ++
Sbjct: 125 GKGYYDAYLKRCLQHQEVK----PYTLALAFKEQICLQ--VPVNENDMKVDEVL 172
>UNIPROTKB|Q1RMT3 [details] [associations]
symbol:MTHFS "5,10-methenyltetrahydrofolate synthetase
(5-formyltetrahydrofolate cyclo-ligase)" species:9913 "Bos taurus"
[GO:0030272 "5-formyltetrahydrofolate cyclo-ligase activity"
evidence=IEA] [GO:0009396 "folic acid-containing compound
biosynthetic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR002698 Pfam:PF01812 PIRSF:PIRSF006806
GO:GO:0005524 GO:GO:0009396 eggNOG:COG0212 KO:K01934 GO:GO:0030272
Gene3D:3.40.50.10420 InterPro:IPR024185 PANTHER:PTHR23407:SF1
TIGRFAMs:TIGR02727 GeneTree:ENSGT00390000017791
HOGENOM:HOG000007299 OMA:NENDMKV CTD:10588 HOVERGEN:HBG052525
OrthoDB:EOG4BG8X3 EMBL:DAAA02052304 EMBL:BC114726 IPI:IPI00696438
RefSeq:NP_001069084.1 UniGene:Bt.24981 STRING:Q1RMT3
Ensembl:ENSBTAT00000026669 GeneID:513372 KEGG:bta:513372
InParanoid:Q1RMT3 NextBio:20870827 Uniprot:Q1RMT3
Length = 201
Score = 135 (52.6 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 46/209 (22%), Positives = 99/209 (47%)
Query: 24 KRILRSQVRKTLKSMDPSLRSHEDNAIQKIVLEAPWFKSSQRLCAYISCSALREVDTSKL 83
KR LR+++++ L+++ R + + + + V ++ S+R+ ++S E++T ++
Sbjct: 11 KRSLRAELKQRLRALSAEERLRQSHLLAQKVFTHNEYQKSKRVSIFLSMPD--EIETEEI 68
Query: 84 LSQILQIPNADGDTKTRKKLYVPRVEDKNSHMRMFHISSIDDLIA---NSMNILEPAPVD 140
+ I + G T ++PR + +++HM M ++S +++ S NI +P
Sbjct: 69 IKDIFR----QGKT-----CFIPRYQLQSNHMDMVKLASPEEIALLPRTSWNIQQPG--- 116
Query: 141 ADGNEREDVMQANEPVDLFLLPGLAFDXXXXXXXXXXXYYDTFLKKYQELAKERNWRQPL 200
+ E+ + +DL +PGL FD YYD +LK+ + + P
Sbjct: 117 -EDEVLEEALSTGG-LDLIFVPGLGFDKQSNRLGRGKGYYDAYLKRCLQSQDVK----PY 170
Query: 201 FVALSYSLQIMDEGIISATPKDMPVDALV 229
+AL++ QI + + D+ VD ++
Sbjct: 171 TLALAFKEQICLQ--VPVNENDVKVDEVL 197
>WB|WBGene00013708 [details] [associations]
symbol:Y106G6E.4 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0009396 "folic
acid-containing compound biosynthetic process" evidence=IEA]
[GO:0030272 "5-formyltetrahydrofolate cyclo-ligase activity"
evidence=IEA] InterPro:IPR002698 Pfam:PF01812 PIRSF:PIRSF006806
GO:GO:0005524 GO:GO:0009396 EMBL:AL032656 eggNOG:COG0212 KO:K01934
GO:GO:0030272 Gene3D:3.40.50.10420 InterPro:IPR024185
PANTHER:PTHR23407:SF1 TIGRFAMs:TIGR02727
GeneTree:ENSGT00390000017791 HOGENOM:HOG000007299 PIR:T26418
RefSeq:NP_492692.1 ProteinModelPortal:Q9XWE6 SMR:Q9XWE6
STRING:Q9XWE6 PaxDb:Q9XWE6 EnsemblMetazoa:Y106G6E.4 GeneID:190922
KEGG:cel:CELE_Y106G6E.4 UCSC:Y106G6E.4 CTD:190922
WormBase:Y106G6E.4 InParanoid:Q9XWE6 OMA:NENDMKV NextBio:947390
Uniprot:Q9XWE6
Length = 206
Score = 134 (52.2 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 48/210 (22%), Positives = 93/210 (44%)
Query: 17 LESIFQQKRILRSQVRKTLKSMDPSLRSHEDNAIQKIVLEAPWFKSSQRLCAYISCSALR 76
+ +I + K LR ++ L + + A+ + ++E+ WF+ S+RL Y+S S
Sbjct: 1 MSAIKEVKSELRQFMKTLLGKISKEETQRQTEAVFEKIIESKWFQESKRLSVYVSTSG-- 58
Query: 77 EVDTSKLLSQILQIPNADGDTKTRKKLYVPRVEDKNSHMRMFHI---SSIDDLIANSMNI 133
E+ T ++ + L++ G K++++P+ ++ M M + ++ D+L + I
Sbjct: 59 EIQTDSIIQKALEM----G-----KEVFIPQFTKGSTAMDMVRVPDQTAFDNLPSTLWGI 109
Query: 134 LEPAPVDADGNEREDVMQANEPVDLFLLPGLAFDXXXXXXXXXXXYYDTFLKKYQELAKE 193
+P P + P+DL L PG+AF YYD F + + E
Sbjct: 110 RQPEP-----KWKWQSYHETGPLDLILAPGVAFSPYGLRCGHGKGYYDRFFSTHHKHFPE 164
Query: 194 RNWRQPLFVALSYSLQIMDEGIISATPKDM 223
+ P + L+ QI+ IS T ++
Sbjct: 165 NS---PKKIGLALREQIIGTIPISETDVEL 191
>CGD|CAL0002688 [details] [associations]
symbol:orf19.4523 species:5476 "Candida albicans" [GO:0005739
"mitochondrion" evidence=IEA] [GO:0030272 "5-formyltetrahydrofolate
cyclo-ligase activity" evidence=IEA] [GO:0009396 "folic
acid-containing compound biosynthetic process" evidence=IEA]
InterPro:IPR002698 Pfam:PF01812 PIRSF:PIRSF006806 CGD:CAL0002688
GO:GO:0005524 GO:GO:0009396 eggNOG:COG0212 KO:K01934 GO:GO:0030272
Gene3D:3.40.50.10420 InterPro:IPR024185 PANTHER:PTHR23407:SF1
TIGRFAMs:TIGR02727 EMBL:AACQ01000143 EMBL:AACQ01000140
RefSeq:XP_712854.1 RefSeq:XP_712948.1 ProteinModelPortal:Q59TA8
STRING:Q59TA8 GeneID:3645416 GeneID:3645502 KEGG:cal:CaO19.11998
KEGG:cal:CaO19.4523 Uniprot:Q59TA8
Length = 207
Score = 127 (49.8 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 46/215 (21%), Positives = 97/215 (45%)
Query: 24 KRILRSQVRKTLKSMDPSLRSHEDNAIQKIVLEAPWFKSSQRLCAYISCSALREVDTSKL 83
KR LR Q++ LK++ + + I + +L +FK++ + +++ EV T ++
Sbjct: 10 KRQLRKQLKSNLKTITQDSLIKQSHLIHQNLLNHEFFKTANNIAVFMNMPD-SEVKTMEI 68
Query: 84 LSQILQIPNADGDTKTRKKLYVPRVEDKNSHMRMFHISSIDDLIA----NSMNILEPAPV 139
+ ++ + + YV K+++M + + S++ + +LEP
Sbjct: 69 IESCFKLGKS---VYLPRCNYVSSPGRKSNYMSLLEMPSLEAIHQLKPQGKYQLLEPLT- 124
Query: 140 DADGNEREDVMQANEPVDLFLLPGLAFDXXXXXXXXXXXYYDTFLKKYQELAKERNWRQP 199
GN D ++ +DL ++PG+AFD +YD F+ + K R+P
Sbjct: 125 ---GN---DAIETGI-LDLIIVPGVAFDKNKNRMGHGAGFYDEFITTFHNKFK----RKP 173
Query: 200 LFVALSYSLQIMDEGIISATPKDMPVDALVSPSGV 234
+ ++ QI+D I P D +D++++ + V
Sbjct: 174 YLLGVALQEQIVD--YIPTEPHDWKLDSIITSTNV 206
>TIGR_CMR|CHY_0730 [details] [associations]
symbol:CHY_0730 "5,10-methenyltetrahydrofolate synthetase"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0006730 "one-carbon metabolic process" evidence=ISS]
[GO:0030272 "5-formyltetrahydrofolate cyclo-ligase activity"
evidence=ISS] InterPro:IPR002698 Pfam:PF01812 PIRSF:PIRSF006806
GO:GO:0005524 EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0009396
eggNOG:COG0212 KO:K01934 GO:GO:0030272 Gene3D:3.40.50.10420
InterPro:IPR024185 PANTHER:PTHR23407:SF1 TIGRFAMs:TIGR02727
HOGENOM:HOG000007299 OMA:YRQLAQH RefSeq:YP_359584.1
ProteinModelPortal:Q3AE50 STRING:Q3AE50 GeneID:3726304
KEGG:chy:CHY_0730 PATRIC:21274593
BioCyc:CHYD246194:GJCN-730-MONOMER Uniprot:Q3AE50
Length = 192
Score = 123 (48.4 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 37/135 (27%), Positives = 60/135 (44%)
Query: 101 KKLYVPRVEDKNSHMRMFHISSIDDLIANSMNILEPAPVDADGNEREDVMQANEPVDLFL 160
KK+ +P + ++ DL+ + ILEP E + E +DL L
Sbjct: 70 KKVVIPVTVLSEKKLLPVYLRDFGDLVEGTYGILEP-------KEEARTIAEPEVIDLVL 122
Query: 161 LPGLAFDXXXXXXXXXXXYYDTFLKKYQELAKERNWRQPLFVALSYSLQIMDEGIISATP 220
+PG+AFD +YD FL Q K+ VAL++ LQI+ + I P
Sbjct: 123 VPGVAFDLKGNRLGYGAGFYDRFLPNLQPAVKK--------VALAFELQIVPK--IPTGP 172
Query: 221 KDMPVDALVSPSGVI 235
D+P+D +++ +I
Sbjct: 173 HDIPMDYIITEERII 187
>TIGR_CMR|CBU_0066 [details] [associations]
symbol:CBU_0066 "5-formyltetrahydrofolate cyclo-ligase
family protein" species:227377 "Coxiella burnetii RSA 493"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR002698 Pfam:PF01812
PIRSF:PIRSF006806 GO:GO:0005524 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0009396 KO:K01934 GO:GO:0030272
Gene3D:3.40.50.10420 InterPro:IPR024185 PANTHER:PTHR23407:SF1
TIGRFAMs:TIGR02727 OMA:YRQLAQH HOGENOM:HOG000007300
RefSeq:NP_819119.1 ProteinModelPortal:Q83F82 GeneID:1207936
KEGG:cbu:CBU_0066 PATRIC:17928809 ProtClustDB:CLSK913810
BioCyc:CBUR227377:GJ7S-69-MONOMER Uniprot:Q83F82
Length = 197
Score = 106 (42.4 bits), Expect = 0.00063, P = 0.00063
Identities = 53/213 (24%), Positives = 90/213 (42%)
Query: 28 RSQVRKTLKSMDPSLRSHEDNAIQKIVLEAPWFKS---SQRLCAYISCSALREVDTSKLL 84
+ Q+R L+ L E N +I+ + S S A+ S EVD L
Sbjct: 7 KKQLRDQLRQRRNELSFQEKNKASEIICKKIMGLSIFKSSERLAFY-LSHDGEVDIRIAL 65
Query: 85 SQILQIPNADGDTKTRKKLYVPRVE---DKNSHMRMFHISSIDDLIANSMNILEPAPVDA 141
S+ L++ +K ++P + D + +H+ S +LI N I EP P
Sbjct: 66 SKALEV---------KKACFLPLLHCTLDHHLDFYSYHLKS--ELIKNRFGIGEPDPT-- 112
Query: 142 DGNEREDVMQANEPVDLFLLPGLAFDXXXXXXXXXXXYYDTFLKKYQELAKERNWRQPLF 201
RE + E +DL LP +AFD YYD L K+ N ++P
Sbjct: 113 ----RETPIATKE-LDLIFLPLVAFDKDGNRLGRGAGYYDRALA----FLKDSNAQKPKL 163
Query: 202 VALSYSLQIMDEGIISATPKDMPVDALVSPSGV 234
+ ++Y Q ++ I+A D+P++++V+ +
Sbjct: 164 IGVAYEFQKINS--ITAEKWDIPLNSVVTEKNI 194
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.131 0.370 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 247 236 0.00089 113 3 11 22 0.43 33
32 0.43 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 16
No. of states in DFA: 586 (62 KB)
Total size of DFA: 173 KB (2102 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 22.12u 0.10s 22.22t Elapsed: 00:00:01
Total cpu time: 22.12u 0.10s 22.22t Elapsed: 00:00:01
Start: Sat May 11 05:27:38 2013 End: Sat May 11 05:27:39 2013