Your job contains 1 sequence.
>025860
MLRRSVEIAREARDMYFERCSKSSCDSVTDDRIPKHRPILVAASVGSYGAYLADGSEYSG
NYGDAITVETLKDFHRRRVQVLVESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAWFS
FNSKDGVNVVSGDSLLECASIAESCKRVVSVGINCTPPRFISGLILIIKKVTAKPILIYP
NSGEFYDADRKEWVQNTGVSDEDFVSYVSKWCEVGASLVGGCCRTTPNTIKGIYRTLSNR
SSVLSLR
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 025860
(247 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2077234 - symbol:HMT2 "homocysteine methyltran... 900 3.1e-90 1
UNIPROTKB|Q4VNK0 - symbol:SMT "Selenocysteine Se-methyltr... 853 3.0e-85 1
TAIR|locus:2094419 - symbol:HMT3 "homocysteine S-methyltr... 797 2.6e-79 1
UNIPROTKB|A4ZGQ8 - symbol:HMT1 "Homocysteine S-methyltran... 625 4.3e-61 1
TAIR|locus:2092120 - symbol:HMT-1 species:3702 "Arabidops... 612 1.0e-59 1
UNIPROTKB|Q47690 - symbol:mmuM species:83333 "Escherichia... 376 1.1e-34 1
FB|FBgn0032727 - symbol:CG10623 species:7227 "Drosophila ... 348 9.8e-32 1
ZFIN|ZDB-GENE-030131-9545 - symbol:zgc:172121 "zgc:172121... 319 1.2e-28 1
FB|FBgn0032726 - symbol:CG10621 species:7227 "Drosophila ... 314 3.9e-28 1
CGD|CAL0004923 - symbol:SAM4 species:5476 "Candida albica... 240 2.7e-20 1
SGD|S000003985 - symbol:MHT1 "S-methylmethionine-homocyst... 201 5.7e-16 1
SGD|S000006194 - symbol:SAM4 "S-adenosylmethionine-homocy... 179 2.0e-13 1
WB|WBGene00020491 - symbol:T13G4.4 species:6239 "Caenorha... 164 9.0e-11 1
SGD|S000004940 - symbol:YMR321C "Putative protein of unkn... 138 2.5e-09 1
TIGR_CMR|GSU_2974 - symbol:GSU_2974 "methylenetetrahydrof... 146 1.1e-07 1
ASPGD|ASPL0000037651 - symbol:AN3378 species:162425 "Emer... 82 6.8e-05 2
TIGR_CMR|CPS_1101 - symbol:CPS_1101 "5-methyltetrahydrofo... 122 0.00019 1
TIGR_CMR|BA_4478 - symbol:BA_4478 "5-methyltetrahydrofola... 120 0.00030 1
UNIPROTKB|Q9KUW9 - symbol:metH "Methionine synthase" spec... 117 0.00072 1
TIGR_CMR|VC_0390 - symbol:VC_0390 "5-methyltetrahydrofola... 117 0.00072 1
>TAIR|locus:2077234 [details] [associations]
symbol:HMT2 "homocysteine methyltransferase 2"
species:3702 "Arabidopsis thaliana" [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0008898 "homocysteine S-methyltransferase
activity" evidence=IEA;ISS;IDA] [GO:0009086 "methionine
biosynthetic process" evidence=RCA;IDA] [GO:0033528
"S-methylmethionine cycle" evidence=IMP] [GO:0000394 "RNA splicing,
via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0006260 "DNA replication" evidence=RCA] [GO:0006306 "DNA
methylation" evidence=RCA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=RCA] [GO:0008283 "cell
proliferation" evidence=RCA] [GO:0009616 "virus induced gene
silencing" evidence=RCA] [GO:0010050 "vegetative phase change"
evidence=RCA] [GO:0043687 "post-translational protein modification"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0051567 "histone H3-K9
methylation" evidence=RCA] InterPro:IPR003726 Pfam:PF02574
PROSITE:PS50970 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0046872 GO:GO:0009086 GO:GO:0008898 Gene3D:3.20.20.330
SUPFAM:SSF82282 EMBL:AL138648 eggNOG:COG2040 HOGENOM:HOG000265278
KO:K00547 ProtClustDB:PLN02489 EMBL:AF219223 EMBL:AF428402
EMBL:BT010165 IPI:IPI00534315 PIR:T48114 PIR:T51939
RefSeq:NP_191884.1 UniGene:At.21554 ProteinModelPortal:Q9M1W4
SMR:Q9M1W4 STRING:Q9M1W4 PaxDb:Q9M1W4 PRIDE:Q9M1W4 DNASU:825500
EnsemblPlants:AT3G63250.1 GeneID:825500 KEGG:ath:AT3G63250
TAIR:At3g63250 InParanoid:Q9M1W4 OMA:YQSSVEG PhylomeDB:Q9M1W4
Genevestigator:Q9M1W4 GO:GO:0033528 Uniprot:Q9M1W4
Length = 333
Score = 900 (321.9 bits), Expect = 3.1e-90, P = 3.1e-90
Identities = 170/243 (69%), Positives = 199/243 (81%)
Query: 1 MLRRSVEIAREARDMYFERCSKSSCDSVTDDRIPKHRPILVAASVGSYGAYLADGSEYSG 60
+L++SVEIA EAR+ Y+++C SS DD+I K RPILVAASVGSYGAYLADGSEYSG
Sbjct: 94 LLKKSVEIATEARNSYYDKCGTSSS---MDDKILKKRPILVAASVGSYGAYLADGSEYSG 150
Query: 61 NYGDAITVETLKDFHRRRVQVLVESAPDLIAFETIPNKIXXXXXXXXXXXXNIKIPAWFS 120
YGD+IT+E LKDFHRRR+QVL ES DLIAFETIPNKI ++KIP WFS
Sbjct: 151 IYGDSITLEKLKDFHRRRLQVLAESGADLIAFETIPNKIEAQAFADLLEEGDVKIPGWFS 210
Query: 121 FNSKDGVNVVSGDSLLECASIAESCKRVVSVGINCTPPRFISGLILIIKKVTAKPILIYP 180
FNSKDGVNVVSGDS+ EC SIAE+C++VV+VGINCTPPRFI GL+L I+KVT+KPIL+YP
Sbjct: 211 FNSKDGVNVVSGDSIKECISIAENCEKVVAVGINCTPPRFIEGLVLEIEKVTSKPILVYP 270
Query: 181 NSGEFYDADRKEWVQNTGVSDEDFVSYVSKWCEVGASLVGGCCRTTPNTIKGIYRTLSNR 240
NSGE YDADRKEWV+NTGV DEDFVSYV KW + G SL+GGCCRTTP TI+ I++ L NR
Sbjct: 271 NSGESYDADRKEWVENTGVGDEDFVSYVEKWMDAGVSLLGGCCRTTPTTIRAIHKRLVNR 330
Query: 241 SSV 243
S+
Sbjct: 331 RSL 333
>UNIPROTKB|Q4VNK0 [details] [associations]
symbol:SMT "Selenocysteine Se-methyltransferase"
species:36774 "Brassica oleracea var. italica" [GO:0010269
"response to selenium ion" evidence=IDA] [GO:0016205
"selenocysteine methyltransferase activity" evidence=IDA]
[GO:0032259 "methylation" evidence=IDA] InterPro:IPR003726
Pfam:PF02574 PROSITE:PS50970 GO:GO:0046872 GO:GO:0010269
GO:GO:0008898 Gene3D:3.20.20.330 SUPFAM:SSF82282 EMBL:AY817737
BioCyc:MetaCyc:MONOMER-15249 GO:GO:0016205 Uniprot:Q4VNK0
Length = 346
Score = 853 (305.3 bits), Expect = 3.0e-85, P = 3.0e-85
Identities = 163/245 (66%), Positives = 192/245 (78%)
Query: 1 MLRRSVEIAREARDMYFERCSKSSCDSVTDDRIPKHRPILVAASVGSYGAYLADGSEYSG 60
+LR+SVEIA EAR Y+++C D +I K RPILVAASVGSYGA+LADGSEYSG
Sbjct: 99 LLRKSVEIACEARSTYYDKCKDDD-----DKKILKKRPILVAASVGSYGAFLADGSEYSG 153
Query: 61 NYGDAITVETLKDFHRRRVQVLVESAPDLIAFETIPNKIXXXXXXXXXXXXNIKIPAWFS 120
YGD IT+ETLKDFHRRRVQVL ES D+IAFETIPNK+ KIP WFS
Sbjct: 154 IYGDLITLETLKDFHRRRVQVLAESGADIIAFETIPNKLEAQAFAELLDEGVAKIPGWFS 213
Query: 121 FNSKDGVNVVSGDSLLECASIAESCKRVVSVGINCTPPRFISGLILIIKKVTAKPILIYP 180
FNSKDGVNVVSGDS+ EC +IAE+C++VV+VGINCTPPRFI GL+L I KVT+KPIL+YP
Sbjct: 214 FNSKDGVNVVSGDSIKECIAIAEACEKVVAVGINCTPPRFIEGLVLEIAKVTSKPILVYP 273
Query: 181 NSGEFYDADRKEWVQNTGVSDEDFVSYVSKWCEVGASLVGGCCRTTPNTIKGIYRTLSNR 240
NSGE YD +RKEWV+NTGV +EDFVSYV KW + G SL+GGCCRTTP TI+ I++ L +R
Sbjct: 274 NSGERYDPERKEWVENTGVGNEDFVSYVEKWMDAGVSLLGGCCRTTPTTIRAIHKRLVSR 333
Query: 241 SSVLS 245
S+ S
Sbjct: 334 RSLFS 338
>TAIR|locus:2094419 [details] [associations]
symbol:HMT3 "homocysteine S-methyltransferase 3"
species:3702 "Arabidopsis thaliana" [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0008898 "homocysteine S-methyltransferase
activity" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR003726 Pfam:PF02574 PROSITE:PS50970
GO:GO:0005886 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0009086 GO:GO:0008898 Gene3D:3.20.20.330 SUPFAM:SSF82282
EMBL:AB022223 eggNOG:COG2040 HOGENOM:HOG000265278 KO:K00547
ProtClustDB:PLN02489 EMBL:AF297394 EMBL:AK118021 EMBL:BT005318
EMBL:AY087554 IPI:IPI00516296 RefSeq:NP_566715.1 UniGene:At.6305
ProteinModelPortal:Q8LAX0 SMR:Q8LAX0 STRING:Q8LAX0 PaxDb:Q8LAX0
PRIDE:Q8LAX0 EnsemblPlants:AT3G22740.1 GeneID:821845
KEGG:ath:AT3G22740 TAIR:At3g22740 InParanoid:Q8LAX0 OMA:ACETIPC
PhylomeDB:Q8LAX0 Genevestigator:Q8LAX0 GermOnline:AT3G22740
Uniprot:Q8LAX0
Length = 347
Score = 797 (285.6 bits), Expect = 2.6e-79, P = 2.6e-79
Identities = 149/245 (60%), Positives = 188/245 (76%)
Query: 1 MLRRSVEIAREARDMYFERCSKSSCDSVTDDRIPKHRPILVAASVGSYGAYLADGSEYSG 60
+LRRSVEI EAR++++ RC+K S D + + RPILVAASVGSYGAYLADGSEYSG
Sbjct: 98 LLRRSVEITYEAREIFYNRCTKGSWDFAYAGKASR-RPILVAASVGSYGAYLADGSEYSG 156
Query: 61 NYGDAITVETLKDFHRRRVQVLVESAPDLIAFETIPNKIXXXXXXXXXXXXNIKIPAWFS 120
YGD+++ ETLKDFHRRRVQ+L +S DLIAFETIPNK+ +I IPAWFS
Sbjct: 157 IYGDSVSKETLKDFHRRRVQILAKSGADLIAFETIPNKLEAEAYADLLEEEDIDIPAWFS 216
Query: 121 FNSKDGVNVVSGDSLLECASIAESCKRVVSVGINCTPPRFISGLILIIKKVTAKPILIYP 180
F SKDGV+V GDS++ECA +A+SCK VV++GINCT PR+I LI+ ++++T KPI++YP
Sbjct: 217 FTSKDGVSVPRGDSVVECAKVADSCKNVVAIGINCTAPRYIHALIISLRQMTRKPIVVYP 276
Query: 181 NSGEFYDADRKEWVQNTGVSDEDFVSYVSKWCEVGASLVGGCCRTTPNTIKGIYRTLSNR 240
NSGE YD K+W+++ G S+EDFVSYVSKW + GASL GGCCRTTPNTI+ I + LS+
Sbjct: 277 NSGEVYDGLNKKWIKSEGESEEDFVSYVSKWRDAGASLFGGCCRTTPNTIRAIAKVLSDE 336
Query: 241 SSVLS 245
S S
Sbjct: 337 PSAAS 341
>UNIPROTKB|A4ZGQ8 [details] [associations]
symbol:HMT1 "Homocysteine S-methyltransferase 1"
species:36774 "Brassica oleracea var. italica" [GO:0008898
"homocysteine S-methyltransferase activity" evidence=IDA]
[GO:0032259 "methylation" evidence=IDA] InterPro:IPR003726
Pfam:PF02574 PROSITE:PS50970 GO:GO:0046872 GO:GO:0008898
Gene3D:3.20.20.330 SUPFAM:SSF82282 EMBL:DQ679980
BioCyc:MetaCyc:MONOMER-15250 BRENDA:2.1.1.10 Uniprot:A4ZGQ8
Length = 326
Score = 625 (225.1 bits), Expect = 4.3e-61, P = 4.3e-61
Identities = 118/240 (49%), Positives = 162/240 (67%)
Query: 1 MLRRSVEIAREARDMYFERCSKSSCDSVTDDRIPKHRPILVAASVGSYGAYLADGSEYSG 60
+L++SV++A EARD ++++ SK+S S + LVAAS+GSYGAYLADGSEYSG
Sbjct: 95 LLQKSVKLAVEARDRFWDKVSKTSGHS--------YNRALVAASIGSYGAYLADGSEYSG 146
Query: 61 NYGDAITVETLKDFHRRRVQVLVESAPDLIAFETIPNKIXXXXXXXXXXXXNIKIPAWFS 120
+YG+ ++++ LKDFHRRR+QVLVE++PDL+AFETIPNK+ N++IPAW
Sbjct: 147 SYGEDVSLDKLKDFHRRRIQVLVEASPDLLAFETIPNKLEAQACVELLEEENVQIPAWIC 206
Query: 121 FNSKDGVNVVSGDSLLECASIAESCKRVVSVGINCTPPRFISGLILIIKKVTAKPILIYP 180
F S DG N SG+S EC + +VGINC PP+F+ LI K+T K I++YP
Sbjct: 207 FTSVDGENAPSGESFQECLETLNKSNNICAVGINCAPPQFMDNLIRKFSKLTQKAIVVYP 266
Query: 181 NSGEFYDADRKEWVQNTGVSDEDFVSYVSKWCEVGASLVGGCCRTTPNTIKGIYRTLSNR 240
NSGE +D K+W+ + D +F + +KW ++GA L+GGCCRTTP+TIK I R L R
Sbjct: 267 NSGEVWDGKAKKWLPSQCFGDAEFEMFATKWRDLGAKLIGGCCRTTPSTIKAISRDLKRR 326
>TAIR|locus:2092120 [details] [associations]
symbol:HMT-1 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008898 "homocysteine
S-methyltransferase activity" evidence=IEA;ISS;IDA] [GO:0009086
"methionine biosynthetic process" evidence=IDA] InterPro:IPR003726
Pfam:PF02574 PROSITE:PS50970 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AB023041 GO:GO:0046872 GO:GO:0009086
GO:GO:0008898 Gene3D:3.20.20.330 SUPFAM:SSF82282 EMBL:AF219222
EMBL:AY065163 EMBL:AY081604 IPI:IPI00527423 PIR:T51941
RefSeq:NP_189219.1 UniGene:At.23868 ProteinModelPortal:Q9SDL7
SMR:Q9SDL7 IntAct:Q9SDL7 STRING:Q9SDL7 PRIDE:Q9SDL7
EnsemblPlants:AT3G25900.1 GeneID:822186 KEGG:ath:AT3G25900
TAIR:At3g25900 eggNOG:COG2040 HOGENOM:HOG000265278
InParanoid:Q9SDL7 KO:K00547 OMA:EGYMEYL PhylomeDB:Q9SDL7
ProtClustDB:PLN02489 Genevestigator:Q9SDL7 Uniprot:Q9SDL7
Length = 326
Score = 612 (220.5 bits), Expect = 1.0e-59, P = 1.0e-59
Identities = 118/240 (49%), Positives = 158/240 (65%)
Query: 1 MLRRSVEIAREARDMYFERCSKSSCDSVTDDRIPKHRPILVAASVGSYGAYLADGSEYSG 60
+L++SVE+A EARD ++E+ SK S S + LVAAS+GSYGAYLADGSEYSG
Sbjct: 95 LLQKSVELAVEARDRFWEKVSKVSGHS--------YNRALVAASIGSYGAYLADGSEYSG 146
Query: 61 NYGDAITVETLKDFHRRRVQVLVESAPDLIAFETIPNKIXXXXXXXXXXXXNIKIPAWFS 120
+YG+ ++++ LKDFHRRR+QVLVE+ PDL+AFETIPNK+ ++IPAW
Sbjct: 147 HYGENVSLDKLKDFHRRRLQVLVEAGPDLLAFETIPNKLEAQACVELLEEEKVQIPAWIC 206
Query: 121 FNSKDGVNVVSGDSLLECASIAESCKRVVSVGINCTPPRFISGLILIIKKVTAKPILIYP 180
F S DG SG+S EC + +VGINC PP+FI LI K+T K I++YP
Sbjct: 207 FTSVDGEKAPSGESFEECLEPLNKSNNIYAVGINCAPPQFIENLIRKFAKLTKKAIVVYP 266
Query: 181 NSGEFYDADRKEWVQNTGVSDEDFVSYVSKWCEVGASLVGGCCRTTPNTIKGIYRTLSNR 240
NSGE +D K+W+ + D++F + +KW ++GA L+GGCCRTTP+TI I R L R
Sbjct: 267 NSGEVWDGKAKQWLPSQCFGDDEFEMFATKWRDLGAKLIGGCCRTTPSTINAISRDLKRR 326
>UNIPROTKB|Q47690 [details] [associations]
symbol:mmuM species:83333 "Escherichia coli K-12"
[GO:0006974 "response to DNA damage stimulus" evidence=IEP]
[GO:0032259 "methylation" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0008652 "cellular amino acid biosynthetic
process" evidence=IEA] [GO:0008168 "methyltransferase activity"
evidence=IEA] [GO:0008898 "homocysteine S-methyltransferase
activity" evidence=IEA] [GO:0009086 "methionine biosynthetic
process" evidence=IEA] InterPro:IPR003726 Pfam:PF02574
PROSITE:PS50970 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0046872 GO:GO:0006974 EMBL:U70214
GO:GO:0009086 GO:GO:0008898 Gene3D:3.20.20.330 SUPFAM:SSF82282
eggNOG:COG2040 HOGENOM:HOG000265278 KO:K00547 OMA:ACETIPC
PIR:E64751 RefSeq:NP_414795.1 RefSeq:YP_488556.1
ProteinModelPortal:Q47690 SMR:Q47690 IntAct:Q47690
EnsemblBacteria:EBESCT00000001025 EnsemblBacteria:EBESCT00000018250
GeneID:12930783 GeneID:946143 KEGG:ecj:Y75_p0252 KEGG:eco:b0261
PATRIC:32115641 EcoGene:EG13343 ProtClustDB:PRK09485
BioCyc:EcoCyc:MMUM-MONOMER BioCyc:ECOL316407:JW0253-MONOMER
BioCyc:MetaCyc:MMUM-MONOMER Genevestigator:Q47690 Uniprot:Q47690
Length = 310
Score = 376 (137.4 bits), Expect = 1.1e-34, P = 1.1e-34
Identities = 85/233 (36%), Positives = 127/233 (54%)
Query: 1 MLRRSVEIAREARDMYFERCSKSSCDSVTDDRIPKHRPILVAASVGSYGAYLADGSEYSG 60
++ +SVE+AR+AR+ Y + ++ P+ +LVA SVG YGAYLADGSEY G
Sbjct: 91 LIGKSVELARKAREAY-----------LAEN--PQAGTLLVAGSVGPYGAYLADGSEYRG 137
Query: 61 NYGDAITVETLKDFHRRRVQVLVESAPDLIAFETIPNKIXXXXXXXXXXXXNIKIPAWFS 120
+Y +VE + FHR RV+ L+++ DL+A ET+PN + AWFS
Sbjct: 138 DYH--CSVEAFQAFHRPRVEALLDAGADLLACETLPN-FSEIEALAELLTAYPRARAWFS 194
Query: 121 FNSKDGVNVVSGDSLLECASIAESCKRVVSVGINCTPPRFISGLILIIKKVTAKPILIYP 180
F +D ++ G L + ++ +VV++GINC + + + +T P+++YP
Sbjct: 195 FTLRDSEHLSDGTPLRDVVALLAGYPQVVALGINCIALENTTAALQHLHGLTVLPLVVYP 254
Query: 181 NSGEFYDADRKEWVQNTGVSDEDFVSYVSKWCEVGASLVGGCCRTTPNTIKGI 233
NSGE YDA K W + G Y+ +W GA L+GGCCRTTP I +
Sbjct: 255 NSGEHYDAVSKTW-HHHGEHCAQLADYLPQWQAAGARLIGGCCRTTPADIAAL 306
>FB|FBgn0032727 [details] [associations]
symbol:CG10623 species:7227 "Drosophila melanogaster"
[GO:0016205 "selenocysteine methyltransferase activity"
evidence=ISS] [GO:0008898 "homocysteine S-methyltransferase
activity" evidence=IEA] InterPro:IPR003726 Pfam:PF02574
PROSITE:PS50970 EMBL:AE014134 GO:GO:0008898 Gene3D:3.20.20.330
SUPFAM:SSF82282 HSSP:Q93088 OMA:YQSSVEG
GeneTree:ENSGT00510000049619 OrthoDB:EOG45MKN1 EMBL:AY118872
EMBL:AM294641 EMBL:AM294643 EMBL:AM294645 EMBL:AM294646
EMBL:FM245789 EMBL:FM245791 RefSeq:NP_609921.1 UniGene:Dm.13519
MINT:MINT-923852 EnsemblMetazoa:FBtr0081190 GeneID:35153
KEGG:dme:Dmel_CG10623 UCSC:CG10623-RA FlyBase:FBgn0032727
InParanoid:Q9VJ31 GenomeRNAi:35153 NextBio:792127 Uniprot:Q9VJ31
Length = 331
Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
Identities = 75/243 (30%), Positives = 130/243 (53%)
Query: 1 MLRRSVEIAREARDMYFERCSKSSCDSVTDDRIPKHRPILVAASVGSYGAYLADGSEYSG 60
++++SV++A++A++ Y S S + +P L+ S+G YGAYL DGSEY+G
Sbjct: 92 LIQKSVQLAKQAKEQYL-----SEIGSEAESALP-----LIMGSIGPYGAYLHDGSEYTG 141
Query: 61 NYGDAITVETLKDFHRRRVQVLVESAPDLIAFETIPNKIXXXXXXXXXXXXNIKIPAWFS 120
NY D ++ E L+ +H+ R+++ + + D +A ET+P + W S
Sbjct: 142 NYADKMSKEELRAWHKTRIEICLAAGVDGLALETLPCLMEAEAVTELVLDNFPDAKFWVS 201
Query: 121 FNSKDGVNVVSGDSLLECA----SIAESCK---RVVSVGINCTPPRFISGLILIIKKVTA 173
D ++ SG++ E A + +S K R++ +G+NC P F++ L+ + KV
Sbjct: 202 LQCMDEKHMASGENFAEAALSLWRLVQSRKAENRLLGIGLNCVNPLFVTPLLSSLTKVAG 261
Query: 174 K---PILIYPNSGEFYDADRKEWVQNTGVSDEDFVSYVSKWCEVGASLVGGCCRTTPNTI 230
P+++Y N GE YD ++ +W TG E+ V +V +W ++G +VGGCCR P +
Sbjct: 262 SDRIPLVVYSNRGEIYDVEQGDWT-GTG---EEVVKFVPEWIQLGVRIVGGCCRVYPTDV 317
Query: 231 KGI 233
I
Sbjct: 318 LAI 320
>ZFIN|ZDB-GENE-030131-9545 [details] [associations]
symbol:zgc:172121 "zgc:172121" species:7955 "Danio
rerio" [GO:0008898 "homocysteine S-methyltransferase activity"
evidence=IEA] InterPro:IPR003726 Pfam:PF02574 PROSITE:PS50970
ZFIN:ZDB-GENE-030131-9545 GO:GO:0008898 Gene3D:3.20.20.330
SUPFAM:SSF82282 GeneTree:ENSGT00510000049619 EMBL:AL928701
IPI:IPI00934771 Ensembl:ENSDART00000043496 Bgee:F1RAY3
Uniprot:F1RAY3
Length = 311
Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 82/232 (35%), Positives = 120/232 (51%)
Query: 1 MLRRSVEIAREARDMYFERCSKSSCDSVTDDRIPKHRPILVAASVGSYGAYLADGSEYSG 60
M+ +V++A+E + S+S ++D R P LVA SVG YG++L DGSEY+G
Sbjct: 86 MMMSAVQLAKETVSEFI---SQSP---MSDRREP-----LVAGSVGPYGSFLHDGSEYTG 134
Query: 61 NYGDAITVETLKDFHRRRVQVLVESAPDLIAFETIPNKIXXXXXXXXXXXXNIKIPAWFS 120
Y D +TVE LKD+HR ++Q LV++ DL+A ETIP + + AW S
Sbjct: 135 AYEDKMTVEELKDWHRPQIQCLVKAGADLVAMETIPG-LKEAEALVEVLKEFPETKAWLS 193
Query: 121 FNSKDGVNVVSGDSLLECASIAESCKRVVSVGINCTPPRFISGLILIIKKVTAKPI--LI 178
F+ KD ++ SG E +A ++V+VG+NC P + L+ K + ++
Sbjct: 194 FSCKDNNSISSGRRFSEAVEMACRSTQLVAVGVNCCPALLVKPLLESAKSHKRADLSWVV 253
Query: 179 YPNSGEFYDADRKEWVQNTGVSDEDFVSYVSKWCEVGASLVGGCCRTTPNTI 230
YPNSGE +D W S F + +W GA +GGCCR P I
Sbjct: 254 YPNSGEGWDVTTG-WKTEMRTS---FANLSLEWKAQGALWIGGCCRVRPADI 301
>FB|FBgn0032726 [details] [associations]
symbol:CG10621 species:7227 "Drosophila melanogaster"
[GO:0016205 "selenocysteine methyltransferase activity"
evidence=ISS] [GO:0008898 "homocysteine S-methyltransferase
activity" evidence=IEA] InterPro:IPR003726 Pfam:PF02574
PROSITE:PS50970 EMBL:AE014134 GO:GO:0008898 Gene3D:3.20.20.330
SUPFAM:SSF82282 KO:K00547 OMA:ACETIPC GeneTree:ENSGT00510000049619
FlyBase:FBgn0032726 ChiTaRS:CG10621 EMBL:BT030804
RefSeq:NP_609920.1 UniGene:Dm.10781 SMR:Q9VJ32 IntAct:Q9VJ32
MINT:MINT-853631 EnsemblMetazoa:FBtr0081191 GeneID:35152
KEGG:dme:Dmel_CG10621 UCSC:CG10621-RA InParanoid:Q9VJ32
GenomeRNAi:35152 NextBio:792122 Uniprot:Q9VJ32
Length = 331
Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
Identities = 69/244 (28%), Positives = 130/244 (53%)
Query: 1 MLRRSVEIAREARDMYFERCSKSSCDSVTDDRIPKHRPILVAASVGSYGAYLADGSEYSG 60
+++ +V +A A++ Y C ++ + + P+++A S+G +GA+L DGSEY+G
Sbjct: 84 LIKNTVRLAHIAKERYLTECYQAQLS------VQEGYPLIIA-SIGPFGAHLHDGSEYTG 136
Query: 61 NYGDAITVETLKDFHRRRVQVLVESAPDLIAFETIPNKIXXXXXXXXXXXXNIKIPAWFS 120
+Y D + + + D+HR R++ +E+ D +A ETIP ++ + W +
Sbjct: 137 SYADFVPAKEITDWHRVRIEACLEAGVDALAIETIPCQMEAEALVEMLCDDYPDVKFWVA 196
Query: 121 FNSKDGVNVVSGDSLLECAS-----IAE--SCKRVVSVGINCTPPRFISGLILII---KK 170
F KD + G++ + A+ +AE + + +++G+NC P+F++ L + ++
Sbjct: 197 FQCKDENTLAHGETFADAANAIWDLLAERNAQDKCLAIGVNCVHPKFVTPLFKSLNGDRE 256
Query: 171 VTAK-PILIYPNSGEFYDADRKEWVQNTGVSDEDFVSYVSKWCEVGASLVGGCCRTTPNT 229
V + P+++YPNSGE YD W +YV +W ++GA ++GGCCRT
Sbjct: 257 VGEQIPLVVYPNSGEVYDVVNG-WQGREHCVP--LANYVPEWAQLGAKVIGGCCRTYARD 313
Query: 230 IKGI 233
I+ I
Sbjct: 314 IRHI 317
>CGD|CAL0004923 [details] [associations]
symbol:SAM4 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008898 "homocysteine S-methyltransferase activity"
evidence=IEA] [GO:0046498 "S-adenosylhomocysteine metabolic
process" evidence=IEA] [GO:0050667 "homocysteine metabolic process"
evidence=IEA] [GO:0019284 "L-methionine biosynthetic process from
S-adenosylmethionine" evidence=IEA] InterPro:IPR003726 Pfam:PF02574
PROSITE:PS50970 CGD:CAL0004923 GO:GO:0008898 Gene3D:3.20.20.330
SUPFAM:SSF82282 EMBL:AACQ01000177 EMBL:AACQ01000176 eggNOG:COG2040
KO:K00547 RefSeq:XP_711874.1 RefSeq:XP_711903.1 STRING:Q59QD2
GeneID:3646467 GeneID:3646506 KEGG:cal:CaO19.386
KEGG:cal:CaO19.8016 Uniprot:Q59QD2
Length = 311
Score = 240 (89.5 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 64/203 (31%), Positives = 99/203 (48%)
Query: 39 ILVAASVGSYGAYLADGSEYSGNYGDAITVETLKDFHRRRVQVLVESAPDLIAFETIPNK 98
+++A S+G Y LA+GSEY+G+Y +T E L ++H + S D+I ETIP+
Sbjct: 114 VIIAGSIGPYATLLANGSEYNGDY-QGVTDEELIEYHTPLFEFYENSDVDIICIETIPSF 172
Query: 99 IXXXXXXXXXXXXNIKIPAWFSFNSKDGVNVVSGDSLLECASI-AE-SCKRVVSVGINCT 156
K + S N + G + G SL+E A + AE + R V+VGINCT
Sbjct: 173 QELKVIIGLAKKYTSK-EFFISINPQTGSALSDGTSLIEVAQLFAEINDPRFVAVGINCT 231
Query: 157 PPRFISGLILIIKKVTAKPILIYPNSGEFYDADRKEWVQNTGVSDEDFVSYVSKWCEV-G 215
+ + + T P+ IYPN G YD ++V + + + V+KW
Sbjct: 232 SYENVDQISTYL---TDFPLFIYPNLGFVYDTTVHKFVSKV-LQESTWSKSVAKWLAFPN 287
Query: 216 ASLVGGCCRTTPNTIKGIYRTLS 238
+GGCC TTP IK + + ++
Sbjct: 288 VKAIGGCCSTTPAEIKQVAQLIN 310
>SGD|S000003985 [details] [associations]
symbol:MHT1 "S-methylmethionine-homocysteine
methyltransferase" species:4932 "Saccharomyces cerevisiae"
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0009086 "methionine
biosynthetic process" evidence=IEA] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0008168 "methyltransferase activity"
evidence=IEA] [GO:0008898 "homocysteine S-methyltransferase
activity" evidence=IEA;IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0000096 "sulfur amino acid metabolic process"
evidence=IMP] [GO:0008652 "cellular amino acid biosynthetic
process" evidence=IEA] [GO:0032259 "methylation" evidence=IEA]
InterPro:IPR003726 Pfam:PF02574 PROSITE:PS50970 SGD:S000003985
GO:GO:0005737 GO:GO:0046872 EMBL:BK006945 GO:GO:0009086 EMBL:Z47973
GO:GO:0008898 Gene3D:3.20.20.330 SUPFAM:SSF82282 GO:GO:0000096
eggNOG:COG2040 OMA:ACETIPC EMBL:Z73167 EMBL:AY558194 PIR:S50958
RefSeq:NP_013038.1 ProteinModelPortal:Q12525 DIP:DIP-1934N
IntAct:Q12525 MINT:MINT-397842 STRING:Q12525 PaxDb:Q12525
EnsemblFungi:YLL062C GeneID:850664 KEGG:sce:YLL062C CYGD:YLL062c
GeneTree:ENSGT00510000049619 HOGENOM:HOG000066018 OrthoDB:EOG4MSH79
NextBio:966638 Genevestigator:Q12525 GermOnline:YLL062C
Uniprot:Q12525
Length = 324
Score = 201 (75.8 bits), Expect = 5.7e-16, P = 5.7e-16
Identities = 61/198 (30%), Positives = 95/198 (47%)
Query: 45 VGSYGAYLADGS-EYSGNYGDAITVETLKDFHRRRVQVLVESAP-DLIAFETIPNKIXXX 102
+GS G + A S EY+G+YG F + +++ ++ DLI FETIPN
Sbjct: 122 IGSIGPWAAHVSCEYTGDYGPHPENIDYYGFFKPQLENFNQNRDIDLIGFETIPN-FHEL 180
Query: 103 XXXXXXXXXNIKIPAWFSFNSKDGVNVVSGDSLLECASIAESC-----KRVVSVGINCTP 157
I P + + D + G +L E + + K ++ +G+NC
Sbjct: 181 KAILSWDEDIISKPFYIGLSVDDNSLLRDGTTLEEISVHIKGLGNKINKNLLLMGVNCVS 240
Query: 158 PRFISGLIL--IIKKVTAKPILIYPNSGEFYDADRKEWVQNTGVSDEDFVSYVSKWCEVG 215
S LIL + + + P+L+YPNSGE Y+ K W + T D D+ + V K+ + G
Sbjct: 241 FNQ-SALILKMLHEHLPGMPLLVYPNSGEIYNPKEKTWHRPTNKLD-DWETTVKKFVDNG 298
Query: 216 ASLVGGCCRTTPNTIKGI 233
A ++GGCCRT+P I I
Sbjct: 299 ARIIGGCCRTSPKDIAEI 316
>SGD|S000006194 [details] [associations]
symbol:SAM4 "S-adenosylmethionine-homocysteine
methyltransferase" species:4932 "Saccharomyces cerevisiae"
[GO:0008898 "homocysteine S-methyltransferase activity"
evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0032259 "methylation"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0008652 "cellular amino acid biosynthetic process"
evidence=IEA] [GO:0008168 "methyltransferase activity"
evidence=IEA] [GO:0046498 "S-adenosylhomocysteine metabolic
process" evidence=IDA] [GO:0009086 "methionine biosynthetic
process" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0019284 "L-methionine biosynthetic process from
S-adenosylmethionine" evidence=IDA] [GO:0050667 "homocysteine
metabolic process" evidence=IDA] InterPro:IPR003726 Pfam:PF02574
PROSITE:PS50970 SGD:S000006194 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 EMBL:BK006949 GO:GO:0008898 Gene3D:3.20.20.330
SUPFAM:SSF82282 GO:GO:0050667 GO:GO:0046498 eggNOG:COG2040
KO:K00547 OMA:EGYMEYL GO:GO:0019284 GeneTree:ENSGT00510000049619
HOGENOM:HOG000066018 OrthoDB:EOG4MSH79 EMBL:Z73629 PIR:S65306
RefSeq:NP_015050.1 ProteinModelPortal:Q08985 SMR:Q08985
STRING:Q08985 PaxDb:Q08985 PeptideAtlas:Q08985 EnsemblFungi:YPL273W
GeneID:855855 KEGG:sce:YPL273W CYGD:YPL273w NextBio:980460
Genevestigator:Q08985 GermOnline:YPL273W Uniprot:Q08985
Length = 325
Score = 179 (68.1 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 54/200 (27%), Positives = 94/200 (47%)
Query: 45 VGSYGAYLADGSEYSGNYG-DAITVETLKDFHRRRVQVLVESAPDLIAFETIPNKIXXXX 103
+G +GA++ E++G+YG + ++ + F + DLI FETIPN I
Sbjct: 126 IGPWGAHIC--REFTGDYGAEPENIDFYQYFKPQLENFNKNDKLDLIGFETIPN-IHELK 182
Query: 104 XXXXXXXXNIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVS-----VGINCTP- 157
+ P + + + + G ++ E A + + ++ +GINC
Sbjct: 183 AILSWDESILSRPFYIGLSVHEHGVLRDGTTMEEIAQVIKDLGDKINPNFSFLGINCVSF 242
Query: 158 ---PRFISGLILIIKKVTAKPILIYPNSGEFYDADRKEWVQNTG-VSDEDFVSYVSKWCE 213
P + L + + +L YPNSGE YD ++K W+ N+ ++ D V V ++
Sbjct: 243 NQSPDILESLHQALPNMA---LLAYPNSGEVYDTEKKIWLPNSDKLNSWDTV--VKQYIS 297
Query: 214 VGASLVGGCCRTTPNTIKGI 233
GA ++GGCCRT+P I+ I
Sbjct: 298 SGARIIGGCCRTSPKDIQEI 317
>WB|WBGene00020491 [details] [associations]
symbol:T13G4.4 species:6239 "Caenorhabditis elegans"
[GO:0008898 "homocysteine S-methyltransferase activity"
evidence=IEA] InterPro:IPR003726 Pfam:PF02574 PROSITE:PS50970
GO:GO:0008898 Gene3D:3.20.20.330 SUPFAM:SSF82282 eggNOG:COG2040
GeneTree:ENSGT00510000049619 EMBL:FO080889 RefSeq:NP_508223.2
PaxDb:Q966F6 EnsemblMetazoa:T13G4.4.1 EnsemblMetazoa:T13G4.4.2
EnsemblMetazoa:T13G4.4.3 GeneID:188484 KEGG:cel:CELE_T13G4.4
UCSC:T13G4.4 CTD:188484 WormBase:T13G4.4 InParanoid:Q966F6
OMA:TAIGGCC NextBio:938976 Uniprot:Q966F6
Length = 304
Score = 164 (62.8 bits), Expect = 9.0e-11, P = 9.0e-11
Identities = 55/225 (24%), Positives = 92/225 (40%)
Query: 10 REARDMYFERCSKSSCDSVTDDRIPKHRPILVAASVGSYGAYLADGSEYSGNYGDAITVE 69
RE + YFE C T + SVG+ D SEY+G Y D +
Sbjct: 77 RELYEKYFEETCLKLCHLTTGSS-----DVEAWGSVGTLATMYHDLSEYTGAYMDQSEAK 131
Query: 70 -TLKDFHRRRVQVLVESAPDL--IAFETIPNKIXXXXXXXXXXXXNIKIPAWFSFNSKDG 126
T D+ + + L + + + FETIP+ + A SF K+
Sbjct: 132 KTAYDYFKI-ILTLFHNRSSIRKLIFETIPSADEGSVALDVLQEFP-EFEAVISFTFKEH 189
Query: 127 VNVVSGDSLLECASIAESCKRVVSVGINCTPPRFISGLILIIKKVTAKPILIYPNSGEFY 186
+ G+ + A + +V+ +GINCT P + + ++ + +YPN G+
Sbjct: 190 GCLRHGEKITSVAQQMKQSPQVLGIGINCTDPNNVLPALNELQPFAFSEVFVYPNKGD-- 247
Query: 187 DADRKEWVQNTGVSDEDFVSYVSKWCEVGASLVGGCCRTTPNTIK 231
+E + + V + + V+ W E G + +GGCC T + IK
Sbjct: 248 SKFLEEGIDESNVFTK---TLVTSWIEKGVTAIGGCCGVTNDQIK 289
>SGD|S000004940 [details] [associations]
symbol:YMR321C "Putative protein of unknown function"
species:4932 "Saccharomyces cerevisiae" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0008898 "homocysteine S-methyltransferase activity"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0032259 "methylation" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] InterPro:IPR003726
Pfam:PF02574 PROSITE:PS50970 SGD:S000004940 EMBL:BK006946
EMBL:Z54141 RefSeq:NP_014054.3 GeneID:855371 KEGG:sce:YMR321C
GO:GO:0008898 Gene3D:3.20.20.330 SUPFAM:SSF82282 KO:K01689
RefSeq:NP_014056.3 GeneID:855373 KEGG:sce:YMR323W
GeneTree:ENSGT00510000049619 OrthoDB:EOG4MSH79 PIR:S69879
ProteinModelPortal:Q04898 SMR:Q04898 STRING:Q04898
EnsemblFungi:YMR321C CYGD:YMR321c NextBio:979154
Genevestigator:Q04898 GermOnline:YMR321C Uniprot:Q04898
Length = 105
Score = 138 (53.6 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 32/88 (36%), Positives = 49/88 (55%)
Query: 151 VGINCTP----PRFISGLILIIKKVTAKPILIYPNSGEFYDADRKEWVQNTG-VSDEDFV 205
+GINC P + L + + +L YPNSGE YD ++K W+ N+ ++ D V
Sbjct: 15 LGINCVSFNQSPDILESLHQALPNMA---LLAYPNSGEVYDTEKKIWLPNSDKLNSWDTV 71
Query: 206 SYVSKWCEVGASLVGGCCRTTPNTIKGI 233
V ++ GA ++GGCCRT+P I+ I
Sbjct: 72 --VKQYISSGARIIGGCCRTSPKDIQEI 97
>TIGR_CMR|GSU_2974 [details] [associations]
symbol:GSU_2974 "methylenetetrahydrofolate reductase
family protein" species:243231 "Geobacter sulfurreducens PCA"
[GO:0008152 "metabolic process" evidence=ISS] [GO:0016491
"oxidoreductase activity" evidence=ISS] UniPathway:UPA00193
InterPro:IPR003171 InterPro:IPR003726 Pfam:PF02219 Pfam:PF02574
PROSITE:PS50970 GO:GO:0006555 GO:GO:0008652 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0008898 Gene3D:3.20.20.330
SUPFAM:SSF82282 GO:GO:0035999 KO:K00547 GO:GO:0004489
RefSeq:NP_954016.1 ProteinModelPortal:Q748M7 GeneID:2687368
KEGG:gsu:GSU2974 PATRIC:22028805 HOGENOM:HOG000028409 OMA:QSHLMGL
ProtClustDB:PRK08645 BioCyc:GSUL243231:GH27-2948-MONOMER
Uniprot:Q748M7
Length = 605
Score = 146 (56.5 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 56/199 (28%), Positives = 84/199 (42%)
Query: 41 VAASVGSYGAYLADGSEYSGNYGDAITVETLKDFHRRRVQVLVESAPDLIAFETIPNKIX 100
VA SVG D E S ET+ D RR+ L E DL+ ET +
Sbjct: 102 VAGSVGPLVRMKGDEQELSAQ-------ETV-DIFRRQTHALAEGEVDLLILETFTDLAQ 153
Query: 101 XXXXXXXXXXXNIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGINC-TPPR 159
+ + A +F ++G ++G +E ++ + VG NC P
Sbjct: 154 MRHALTAARETGLPVVANMAF-LENGR--LAGGIEVERVAVELTAAGACVVGANCGAGPL 210
Query: 160 FISGLILIIKKVTAKPILIYPNSGEFYDADRKEWVQNTGVSDEDFVSYVSKWCEVGASLV 219
I G I + +VT P+ YPNSG F + V T + + F + GA+LV
Sbjct: 211 EILGTIQRMGRVTDLPLAAYPNSG-FPEYVNGRHVYRT--TPDYFADRAVEMVGAGAALV 267
Query: 220 GGCCRTTPNTIKGIYRTLS 238
GGCC TTP ++ + + L+
Sbjct: 268 GGCCGTTPEHVRCLAQRLA 286
>ASPGD|ASPL0000037651 [details] [associations]
symbol:AN3378 species:162425 "Emericella nidulans"
[GO:0008898 "homocysteine S-methyltransferase activity"
evidence=IEA;RCA] [GO:0000096 "sulfur amino acid metabolic process"
evidence=IEA;RCA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR003726 Pfam:PF02574 PROSITE:PS50970 EMBL:BN001306
GO:GO:0008898 Gene3D:3.20.20.330 SUPFAM:SSF82282 EMBL:AACD01000055
eggNOG:COG2040 HOGENOM:HOG000265278 KO:K00547 OrthoDB:EOG42NN8C
RefSeq:XP_660982.1 ProteinModelPortal:Q5B7V2 STRING:Q5B7V2
EnsemblFungi:CADANIAT00009662 GeneID:2874359 KEGG:ani:AN3378.2
OMA:ASHTIND Uniprot:Q5B7V2
Length = 355
Score = 82 (33.9 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 34/117 (29%), Positives = 52/117 (44%)
Query: 136 LECASIAESCKRVVSV---GINCTPPRFIS-GLILIIKKVTAKP-ILIYPNS--GEFYDA 188
L C I E+ ++V++ ++C R G + + KP +++YP+ GE YD
Sbjct: 237 LNCTRI-ENVAKIVAIMRDELHCLLSRGKEDGFVDEWDAASGKPWLVLYPDGTKGEKYDP 295
Query: 189 DRKEWV-QNTGVS---DEDFVSYVSKWCEVG--ASLVGGCCRTTPNTIKGIYRTLSN 239
K WV + T V DE V E +VGGCCR P I + R + +
Sbjct: 296 VTKTWVARETVVRCPWDESLWDVVQGQSEGDWEGIIVGGCCRAGPADIAALRRRIDS 352
Score = 79 (32.9 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 22/62 (35%), Positives = 34/62 (54%)
Query: 41 VAASVGSYGAYLAD-GSEYSGNYGDAITVE-TLKDFHRRRVQVLVESAP-----DLIAFE 93
VA S+G YGA ++ +EY+G Y + E L+ +H R+ V V+ D +AFE
Sbjct: 109 VALSLGPYGATMSPVAAEYTGAYPPEMDGEDALRQWHAGRLNVFVDDRESWDQVDFVAFE 168
Query: 94 TI 95
T+
Sbjct: 169 TL 170
>TIGR_CMR|CPS_1101 [details] [associations]
symbol:CPS_1101 "5-methyltetrahydrofolate--homocysteine
S-methyltransferase" species:167879 "Colwellia psychrerythraea 34H"
[GO:0008705 "methionine synthase activity" evidence=ISS]
[GO:0009086 "methionine biosynthetic process" evidence=ISS]
InterPro:IPR000489 InterPro:IPR003726 InterPro:IPR003759
InterPro:IPR004223 InterPro:IPR006158 InterPro:IPR011005
InterPro:IPR011822 Pfam:PF00809 Pfam:PF02310 Pfam:PF02574
Pfam:PF02607 Pfam:PF02965 PIRSF:PIRSF000381 PROSITE:PS50970
PROSITE:PS50972 PROSITE:PS50974 PROSITE:PS51332 PROSITE:PS51337
SMART:SM01018 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0008898
Gene3D:3.20.20.330 SUPFAM:SSF82282 GO:GO:0031419 Gene3D:3.20.20.20
SUPFAM:SSF51717 GO:GO:0042558 Gene3D:3.40.50.280 SUPFAM:SSF52242
GO:GO:0008705 eggNOG:COG1410 HOGENOM:HOG000251409 KO:K00548
Gene3D:1.10.1240.10 Gene3D:3.10.196.10 PANTHER:PTHR21091:SF9
SUPFAM:SSF56507 SUPFAM:SSF47644 TIGRFAMs:TIGR02082 OMA:VRKEFWG
ProtClustDB:PRK09490 RefSeq:YP_267845.1 ProteinModelPortal:Q487C0
SMR:Q487C0 STRING:Q487C0 GeneID:3522779 KEGG:cps:CPS_1101
PATRIC:21465469 BioCyc:CPSY167879:GI48-1183-MONOMER Uniprot:Q487C0
Length = 1230
Score = 122 (48.0 bits), Expect = 0.00019, P = 0.00019
Identities = 58/238 (24%), Positives = 97/238 (40%)
Query: 3 RRSVEIAREARDMYFERCSKSSCDSVTDDRIPKHRPILVAASVGSYGAYLADGSEYSGNY 62
R + +IAREA D Y +K + D RP VA +G + + +
Sbjct: 107 RVAAQIAREAADEY----TKKNPD----------RPRFVAGVLGPTNRTCSISPDVNDPA 152
Query: 63 GDAITVETLKDFHRRRVQVLVESAPDLIAFETIPN----KIXXXXXXXXXXXXNIKIPAW 118
+T + LKD + L+E D+I ETI + K ++P
Sbjct: 153 YRNVTFDELKDAYIESTLALIEGGSDIILIETIFDTLNAKAAVFAVETVFDQLGERLPVM 212
Query: 119 FSFNSKDGVN-VVSGDSLLECASIAESCKRVVSVGINCT-PPRFISGLILIIKKVTAKPI 176
S D +SG + + K V S G+NC P + + + ++ +
Sbjct: 213 ISGTITDASGRTLSGQTTEAFYNSLRHAKPV-SFGLNCALGPVELRQYVAELSRICDTAV 271
Query: 177 LIYPNSGEFYDADRKEWVQNTGVSDEDFVSYVSKWCEVG-ASLVGGCCRTTPNTIKGI 233
+PN+G +A E+ + ED ++V +W G +++GGCC TTP I+G+
Sbjct: 272 SAHPNAG-LPNAFG-EY----DFTVEDMNTHVEEWASSGFLNIIGGCCGTTPEHIRGM 323
>TIGR_CMR|BA_4478 [details] [associations]
symbol:BA_4478 "5-methyltetrahydrofolate--homocysteine
methyltransferase" species:198094 "Bacillus anthracis str. Ames"
[GO:0008705 "methionine synthase activity" evidence=ISS]
[GO:0009086 "methionine biosynthetic process" evidence=ISS]
InterPro:IPR000489 InterPro:IPR003726 InterPro:IPR003759
InterPro:IPR004223 InterPro:IPR006158 InterPro:IPR011005
InterPro:IPR011822 Pfam:PF00809 Pfam:PF02310 Pfam:PF02574
Pfam:PF02607 Pfam:PF02965 PIRSF:PIRSF000381 PROSITE:PS50970
PROSITE:PS50972 PROSITE:PS50974 PROSITE:PS51332 PROSITE:PS51337
SMART:SM01018 GO:GO:0046872 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0008270 GO:GO:0005622 GO:GO:0008898
Gene3D:3.20.20.330 SUPFAM:SSF82282 GO:GO:0031419 Gene3D:3.20.20.20
SUPFAM:SSF51717 GO:GO:0042558 Gene3D:3.40.50.280 SUPFAM:SSF52242
GO:GO:0008705 HSSP:P13009 KO:K00548 Gene3D:1.10.1240.10
Gene3D:3.10.196.10 SUPFAM:SSF56507 SUPFAM:SSF47644
TIGRFAMs:TIGR02082 OMA:VRKEFWG HOGENOM:HOG000251408
RefSeq:NP_846703.1 RefSeq:YP_021121.2 RefSeq:YP_030405.1
ProteinModelPortal:Q81LY1 IntAct:Q81LY1 DNASU:1087945
EnsemblBacteria:EBBACT00000011864 EnsemblBacteria:EBBACT00000015213
EnsemblBacteria:EBBACT00000020664 GeneID:1087945 GeneID:2816756
GeneID:2851208 KEGG:ban:BA_4478 KEGG:bar:GBAA_4478 KEGG:bat:BAS4156
ProtClustDB:CLSK873084 BioCyc:BANT260799:GJAJ-4212-MONOMER
BioCyc:BANT261594:GJ7F-4354-MONOMER Uniprot:Q81LY1
Length = 1132
Score = 120 (47.3 bits), Expect = 0.00030, P = 0.00030
Identities = 42/180 (23%), Positives = 83/180 (46%)
Query: 66 ITVETLKDFHRRRVQVLVESAPDLIAFETIPN--KIXXXXXXXXXXXXNIK--IPAWFSF 121
+T E L + + R+ + L++ D++ ET + + +K +P S
Sbjct: 130 VTFEELIEAYTRQARGLLKGEVDVLLVETSQDMRNMKAAYIGIQAAFDELKKIVPIMISG 189
Query: 122 NSKDGVNVVSGDSLLECASIAESCKRVVSVGINC-TPPRFISGLILIIKKVTAKPILIYP 180
+ ++G ++ E ++ + +SVG+NC T P F+ I + ++ I YP
Sbjct: 190 TIEPMGTTLAGQTI-EAFYLSVEHMKPLSVGLNCATGPEFMRDHIRSLSDLSECYISCYP 248
Query: 181 NSGEFYDADRKEWVQNTGVSDEDFVSYVSKWCEVG-ASLVGGCCRTTPNTIKGIYRTLSN 239
N+G D D + ++++ V ++ E G +++GGCC TTP IK + L++
Sbjct: 249 NAG-LPDEDGHYHESPSSLAEK-----VKRFAEEGWVNIIGGCCGTTPEHIKAMKEALAS 302
>UNIPROTKB|Q9KUW9 [details] [associations]
symbol:metH "Methionine synthase" species:243277 "Vibrio
cholerae O1 biovar El Tor str. N16961" [GO:0008705 "methionine
synthase activity" evidence=ISS] [GO:0009086 "methionine
biosynthetic process" evidence=ISS] InterPro:IPR000489
InterPro:IPR003726 InterPro:IPR003759 InterPro:IPR004223
InterPro:IPR006158 InterPro:IPR011005 InterPro:IPR011822
Pfam:PF00809 Pfam:PF02310 Pfam:PF02574 Pfam:PF02607 Pfam:PF02965
PIRSF:PIRSF000381 PROSITE:PS50970 PROSITE:PS50972 PROSITE:PS50974
PROSITE:PS51332 PROSITE:PS51337 SMART:SM01018 GO:GO:0046872
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0008270 GO:GO:0005622
UniPathway:UPA00051 GO:GO:0008898 Gene3D:3.20.20.330
SUPFAM:SSF82282 GO:GO:0031419 Gene3D:3.20.20.20 SUPFAM:SSF51717
GO:GO:0042558 Gene3D:3.40.50.280 SUPFAM:SSF52242 GO:GO:0008705
eggNOG:COG1410 KO:K00548 Gene3D:1.10.1240.10 Gene3D:3.10.196.10
PANTHER:PTHR21091:SF9 SUPFAM:SSF56507 SUPFAM:SSF47644
TIGRFAMs:TIGR02082 ProtClustDB:PRK09490 OMA:RNQPVEK PIR:E82328
RefSeq:NP_230044.1 ProteinModelPortal:Q9KUW9 SMR:Q9KUW9
PRIDE:Q9KUW9 DNASU:2614987 GeneID:2614987 KEGG:vch:VC0390
PATRIC:20079861 Uniprot:Q9KUW9
Length = 1226
Score = 117 (46.2 bits), Expect = 0.00072, P = 0.00072
Identities = 44/179 (24%), Positives = 78/179 (43%)
Query: 66 ITVETLKDFHRRRVQVLVESAPDLIAFETIPN----KIXXXXXXXXXXXXNIKIPAWFSF 121
+T + L + + + L++ DLI ETI + K I +P S
Sbjct: 155 VTFDGLVEAYSESTRALIKGGSDLILIETIFDTLNAKACAFAVDSVFEELGISLPVMISG 214
Query: 122 NSKDGVN-VVSGDSLLECASIAESCKRVVSVGINCT-PPRFISGLILIIKKVTAKPILIY 179
D +SG + E A R +S G+NC P + + + +++ + +
Sbjct: 215 TITDASGRTLSGQTT-EAFYNALRHVRPISFGLNCALGPDELRQYVEELSRISECYVSAH 273
Query: 180 PNSGEFYDADRKEWVQNTGVSDEDFVSYVSKWCEVG-ASLVGGCCRTTPNTIKGIYRTL 237
PN+G +A E+ +S E+ ++++W + G +LVGGCC TTP I I + +
Sbjct: 274 PNAG-LPNAFG-EY----DLSAEEMAEHIAEWAQAGFLNLVGGCCGTTPEHIAAIAKAV 326
>TIGR_CMR|VC_0390 [details] [associations]
symbol:VC_0390 "5-methyltetrahydrofolate--homocysteine
methyltransferase" species:686 "Vibrio cholerae O1 biovar El Tor"
[GO:0008705 "methionine synthase activity" evidence=ISS]
[GO:0009086 "methionine biosynthetic process" evidence=ISS]
InterPro:IPR000489 InterPro:IPR003726 InterPro:IPR003759
InterPro:IPR004223 InterPro:IPR006158 InterPro:IPR011005
InterPro:IPR011822 Pfam:PF00809 Pfam:PF02310 Pfam:PF02574
Pfam:PF02607 Pfam:PF02965 PIRSF:PIRSF000381 PROSITE:PS50970
PROSITE:PS50972 PROSITE:PS50974 PROSITE:PS51332 PROSITE:PS51337
SMART:SM01018 GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0008270 GO:GO:0005622 UniPathway:UPA00051 GO:GO:0008898
Gene3D:3.20.20.330 SUPFAM:SSF82282 GO:GO:0031419 Gene3D:3.20.20.20
SUPFAM:SSF51717 GO:GO:0042558 Gene3D:3.40.50.280 SUPFAM:SSF52242
GO:GO:0008705 eggNOG:COG1410 KO:K00548 Gene3D:1.10.1240.10
Gene3D:3.10.196.10 PANTHER:PTHR21091:SF9 SUPFAM:SSF56507
SUPFAM:SSF47644 TIGRFAMs:TIGR02082 ProtClustDB:PRK09490 OMA:RNQPVEK
PIR:E82328 RefSeq:NP_230044.1 ProteinModelPortal:Q9KUW9 SMR:Q9KUW9
PRIDE:Q9KUW9 DNASU:2614987 GeneID:2614987 KEGG:vch:VC0390
PATRIC:20079861 Uniprot:Q9KUW9
Length = 1226
Score = 117 (46.2 bits), Expect = 0.00072, P = 0.00072
Identities = 44/179 (24%), Positives = 78/179 (43%)
Query: 66 ITVETLKDFHRRRVQVLVESAPDLIAFETIPN----KIXXXXXXXXXXXXNIKIPAWFSF 121
+T + L + + + L++ DLI ETI + K I +P S
Sbjct: 155 VTFDGLVEAYSESTRALIKGGSDLILIETIFDTLNAKACAFAVDSVFEELGISLPVMISG 214
Query: 122 NSKDGVN-VVSGDSLLECASIAESCKRVVSVGINCT-PPRFISGLILIIKKVTAKPILIY 179
D +SG + E A R +S G+NC P + + + +++ + +
Sbjct: 215 TITDASGRTLSGQTT-EAFYNALRHVRPISFGLNCALGPDELRQYVEELSRISECYVSAH 273
Query: 180 PNSGEFYDADRKEWVQNTGVSDEDFVSYVSKWCEVG-ASLVGGCCRTTPNTIKGIYRTL 237
PN+G +A E+ +S E+ ++++W + G +LVGGCC TTP I I + +
Sbjct: 274 PNAG-LPNAFG-EY----DLSAEEMAEHIAEWAQAGFLNLVGGCCGTTPEHIAAIAKAV 326
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.135 0.403 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 247 235 0.00088 113 3 11 22 0.41 33
32 0.43 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 20
No. of states in DFA: 606 (64 KB)
Total size of DFA: 188 KB (2107 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 18.65u 0.07s 18.72t Elapsed: 00:00:02
Total cpu time: 18.66u 0.07s 18.73t Elapsed: 00:00:02
Start: Sat May 11 05:29:21 2013 End: Sat May 11 05:29:23 2013