Query 025860
Match_columns 247
No_of_seqs 118 out of 1037
Neff 7.3
Searched_HMMs 29240
Date Mon Mar 25 19:12:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025860.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025860hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1q7z_A 5-methyltetrahydrofolat 100.0 1E-50 3.4E-55 390.3 24.1 206 1-243 85-293 (566)
2 1lt8_A Betaine-homocysteine me 100.0 6.6E-51 2.3E-55 376.9 19.4 204 1-240 99-317 (406)
3 1lt8_A Betaine-homocysteine me 96.9 0.023 8E-07 52.2 14.6 155 67-238 52-232 (406)
4 1z41_A YQJM, probable NADH-dep 96.6 0.14 4.8E-06 45.5 17.0 137 68-220 38-247 (338)
5 2ehh_A DHDPS, dihydrodipicolin 96.5 0.13 4.4E-06 44.9 16.1 144 66-237 18-177 (294)
6 3si9_A DHDPS, dihydrodipicolin 96.5 0.055 1.9E-06 47.9 13.6 104 66-183 40-158 (315)
7 3cpr_A Dihydrodipicolinate syn 96.2 0.073 2.5E-06 46.8 12.9 105 66-183 34-152 (304)
8 1q7z_A 5-methyltetrahydrofolat 96.2 0.26 8.9E-06 47.1 17.4 156 67-239 42-223 (566)
9 3qfe_A Putative dihydrodipicol 96.1 0.19 6.5E-06 44.4 15.3 105 66-183 29-149 (318)
10 3fkr_A L-2-keto-3-deoxyarabona 96.1 0.45 1.5E-05 41.8 17.3 144 66-237 26-188 (309)
11 2ojp_A DHDPS, dihydrodipicolin 96.0 0.091 3.1E-06 45.8 12.4 105 66-183 19-137 (292)
12 2vc6_A MOSA, dihydrodipicolina 96.0 0.081 2.8E-06 46.2 12.0 105 66-183 18-136 (292)
13 1f76_A Dihydroorotate dehydrog 96.0 0.22 7.4E-06 44.0 14.9 122 82-220 74-243 (336)
14 1o5k_A DHDPS, dihydrodipicolin 96.0 0.085 2.9E-06 46.4 12.0 105 66-183 30-148 (306)
15 3dz1_A Dihydrodipicolinate syn 95.9 0.79 2.7E-05 40.2 19.2 162 38-238 10-187 (313)
16 2e6f_A Dihydroorotate dehydrog 95.9 0.075 2.6E-06 46.5 11.5 58 114-181 93-168 (314)
17 2qjg_A Putative aldolase MJ040 95.9 0.31 1.1E-05 41.5 15.1 120 78-219 104-234 (273)
18 1xky_A Dihydrodipicolinate syn 95.9 0.11 3.8E-06 45.5 12.3 105 66-183 30-148 (301)
19 2r8w_A AGR_C_1641P; APC7498, d 95.8 0.096 3.3E-06 46.7 11.9 105 66-183 52-170 (332)
20 3na8_A Putative dihydrodipicol 95.7 0.38 1.3E-05 42.4 15.4 121 38-183 26-160 (315)
21 2yxg_A DHDPS, dihydrodipicolin 95.7 0.16 5.4E-06 44.2 12.7 105 66-183 18-136 (289)
22 3a5f_A Dihydrodipicolinate syn 95.7 0.082 2.8E-06 46.1 10.7 105 66-183 19-137 (291)
23 3flu_A DHDPS, dihydrodipicolin 95.7 0.18 6.3E-06 44.0 12.9 121 38-183 9-143 (297)
24 3m5v_A DHDPS, dihydrodipicolin 95.6 0.15 5.3E-06 44.6 12.3 120 38-183 10-144 (301)
25 2wkj_A N-acetylneuraminate lya 95.6 0.12 4.3E-06 45.2 11.7 121 38-183 13-148 (303)
26 3tak_A DHDPS, dihydrodipicolin 95.6 0.14 4.8E-06 44.6 11.9 104 66-182 19-136 (291)
27 2v9d_A YAGE; dihydrodipicolini 95.6 0.11 3.9E-06 46.4 11.4 105 66-183 49-167 (343)
28 3qze_A DHDPS, dihydrodipicolin 95.5 0.18 6E-06 44.6 12.3 104 66-182 41-158 (314)
29 3e96_A Dihydrodipicolinate syn 95.5 0.15 5.2E-06 45.0 11.7 102 66-181 30-145 (316)
30 2rfg_A Dihydrodipicolinate syn 95.4 0.15 5E-06 44.7 11.5 105 66-183 18-136 (297)
31 3eb2_A Putative dihydrodipicol 95.4 0.74 2.5E-05 40.2 15.9 105 66-183 22-140 (300)
32 3l21_A DHDPS, dihydrodipicolin 95.4 0.17 5.6E-06 44.5 11.7 120 39-183 18-151 (304)
33 3d0c_A Dihydrodipicolinate syn 95.4 0.18 6.2E-06 44.4 12.0 105 66-184 30-148 (314)
34 3b4u_A Dihydrodipicolinate syn 95.3 0.35 1.2E-05 42.1 13.5 105 66-183 21-143 (294)
35 3s5o_A 4-hydroxy-2-oxoglutarat 95.3 0.2 6.7E-06 44.1 11.9 105 66-183 32-152 (307)
36 3daq_A DHDPS, dihydrodipicolin 95.2 0.22 7.6E-06 43.4 11.9 105 66-183 20-138 (292)
37 1f6k_A N-acetylneuraminate lya 95.2 0.23 7.7E-06 43.3 11.9 105 66-183 21-140 (293)
38 1jub_A Dihydroorotate dehydrog 95.0 0.2 6.7E-06 43.7 11.0 81 114-219 93-189 (311)
39 3i4e_A Isocitrate lyase; struc 94.9 0.9 3.1E-05 41.9 15.4 134 77-220 171-350 (439)
40 2nuw_A 2-keto-3-deoxygluconate 94.8 0.61 2.1E-05 40.4 13.5 103 66-183 17-133 (288)
41 3eol_A Isocitrate lyase; seatt 94.7 1.2 4.2E-05 41.0 15.5 134 77-220 164-345 (433)
42 2r91_A 2-keto-3-deoxy-(6-phosp 94.6 0.7 2.4E-05 40.0 13.3 103 66-183 16-132 (286)
43 1to3_A Putative aldolase YIHT; 94.6 1 3.5E-05 39.5 14.4 118 82-218 117-250 (304)
44 3b0p_A TRNA-dihydrouridine syn 94.5 0.4 1.4E-05 42.8 11.8 114 85-219 27-161 (350)
45 3lg3_A Isocitrate lyase; conse 94.4 1.2 4.2E-05 40.9 14.9 134 77-220 171-350 (435)
46 1w3i_A EDA, 2-keto-3-deoxy glu 94.4 0.92 3.1E-05 39.4 13.5 103 66-183 17-133 (293)
47 2hmc_A AGR_L_411P, dihydrodipi 94.3 0.4 1.4E-05 42.9 11.2 102 66-182 44-160 (344)
48 3h5d_A DHDPS, dihydrodipicolin 94.0 0.44 1.5E-05 41.9 10.7 119 39-182 10-143 (311)
49 1w1z_A Delta-aminolevulinic ac 94.0 2.7 9.1E-05 37.1 15.4 170 38-219 117-315 (328)
50 3gr7_A NADPH dehydrogenase; fl 93.9 3.2 0.00011 36.8 16.7 136 68-219 38-246 (340)
51 2nx9_A Oxaloacetate decarboxyl 93.9 1.7 5.9E-05 40.4 15.0 100 78-181 105-209 (464)
52 4h3d_A 3-dehydroquinate dehydr 93.8 2.8 9.4E-05 35.8 15.4 149 67-233 30-188 (258)
53 1ydn_A Hydroxymethylglutaryl-C 93.6 1 3.6E-05 38.9 12.5 100 77-183 83-211 (295)
54 4fo4_A Inosine 5'-monophosphat 93.3 0.96 3.3E-05 40.8 11.9 66 76-153 110-176 (366)
55 3obk_A Delta-aminolevulinic ac 93.3 4.3 0.00015 36.2 17.4 174 38-220 128-330 (356)
56 4dpp_A DHDPS 2, dihydrodipicol 93.2 0.81 2.8E-05 41.2 11.3 117 40-183 63-193 (360)
57 1ps9_A 2,4-dienoyl-COA reducta 93.1 1.9 6.7E-05 41.4 14.6 135 68-220 36-246 (671)
58 3noy_A 4-hydroxy-3-methylbut-2 93.1 0.63 2.2E-05 41.8 10.2 140 76-234 49-197 (366)
59 1jub_A Dihydroorotate dehydrog 93.0 2.4 8.1E-05 36.7 13.8 138 73-237 106-289 (311)
60 1vhn_A Putative flavin oxidore 92.9 0.45 1.5E-05 41.7 9.0 91 84-183 26-136 (318)
61 1rqb_A Transcarboxylase 5S sub 92.7 2.6 9E-05 39.9 14.5 100 78-181 122-228 (539)
62 4ef8_A Dihydroorotate dehydrog 92.7 1.2 4.1E-05 39.9 11.6 80 114-217 126-223 (354)
63 3eoo_A Methylisocitrate lyase; 92.6 0.43 1.5E-05 41.9 8.3 83 75-170 173-259 (298)
64 1h7n_A 5-aminolaevulinic acid 92.5 5.4 0.00019 35.3 18.6 173 38-220 125-327 (342)
65 3o1n_A 3-dehydroquinate dehydr 92.5 1.1 3.9E-05 38.6 10.8 103 75-182 121-230 (276)
66 3igs_A N-acetylmannosamine-6-p 92.3 0.32 1.1E-05 40.9 6.9 90 76-183 91-189 (232)
67 1l6s_A Porphobilinogen synthas 92.3 5.6 0.00019 35.0 15.5 170 38-219 111-308 (323)
68 1zlp_A PSR132, petal death pro 92.1 0.42 1.4E-05 42.4 7.7 44 74-122 190-233 (318)
69 1xg4_A Probable methylisocitra 92.0 0.2 6.8E-06 44.0 5.5 84 74-170 168-255 (295)
70 1aj0_A DHPS, dihydropteroate s 92.0 5.7 0.00019 34.4 16.3 175 38-238 14-205 (282)
71 1f8m_A Isocitrate lyase, ICL; 91.7 7.2 0.00025 35.8 15.7 135 77-219 167-345 (429)
72 1vzw_A Phosphoribosyl isomeras 91.7 0.9 3.1E-05 37.8 9.1 99 77-183 88-198 (244)
73 2gzm_A Glutamate racemase; enz 91.7 3.8 0.00013 34.8 13.2 154 61-238 41-199 (267)
74 3q58_A N-acetylmannosamine-6-p 91.6 0.38 1.3E-05 40.5 6.5 90 76-183 91-189 (229)
75 4h3d_A 3-dehydroquinate dehydr 91.2 3.7 0.00013 34.9 12.6 107 67-182 97-210 (258)
76 1sfl_A 3-dehydroquinate dehydr 91.2 5.2 0.00018 33.5 13.4 103 75-182 85-195 (238)
77 3lye_A Oxaloacetate acetyl hyd 91.2 0.31 1.1E-05 43.0 5.9 84 76-171 181-268 (307)
78 4hb7_A Dihydropteroate synthas 91.2 5.8 0.0002 34.2 13.7 159 38-229 6-181 (270)
79 3f4w_A Putative hexulose 6 pho 91.0 2.5 8.5E-05 34.1 10.9 89 79-178 70-164 (211)
80 3ih1_A Methylisocitrate lyase; 90.9 0.5 1.7E-05 41.6 6.8 83 75-170 177-263 (305)
81 1s2w_A Phosphoenolpyruvate pho 90.8 0.3 1E-05 42.8 5.3 43 76-121 173-216 (295)
82 1w5q_A Delta-aminolevulinic ac 90.5 8.8 0.0003 33.9 16.9 171 38-220 121-322 (337)
83 3k30_A Histamine dehydrogenase 90.0 8.9 0.0003 36.9 15.6 136 67-219 42-260 (690)
84 2qf7_A Pyruvate carboxylase pr 90.0 5.4 0.00018 41.2 14.6 99 78-181 650-760 (1165)
85 2hjp_A Phosphonopyruvate hydro 89.9 0.28 9.4E-06 43.0 4.3 42 77-121 170-212 (290)
86 3r89_A Orotidine 5'-phosphate 89.9 1.4 4.6E-05 38.6 8.7 159 67-238 41-218 (290)
87 3oix_A Putative dihydroorotate 89.9 7 0.00024 34.7 13.6 134 75-238 143-323 (345)
88 4gj1_A 1-(5-phosphoribosyl)-5- 89.9 2.9 9.8E-05 35.2 10.6 100 77-179 88-202 (243)
89 2yr1_A 3-dehydroquinate dehydr 89.6 4.7 0.00016 34.3 11.8 107 66-182 97-209 (257)
90 3oix_A Putative dihydroorotate 89.2 6.9 0.00023 34.8 13.0 81 113-218 127-223 (345)
91 3hgj_A Chromate reductase; TIM 89.2 6.3 0.00022 34.8 12.8 151 66-239 142-337 (349)
92 3zwt_A Dihydroorotate dehydrog 89.1 6.3 0.00022 35.3 12.8 87 114-219 146-251 (367)
93 1pv8_A Delta-aminolevulinic ac 88.9 6.8 0.00023 34.6 12.3 173 38-220 114-316 (330)
94 1zuw_A Glutamate racemase 1; ( 88.9 6.1 0.00021 33.6 12.2 150 66-238 45-200 (272)
95 1icp_A OPR1, 12-oxophytodienoa 88.9 10 0.00035 34.0 14.1 79 134-219 168-273 (376)
96 2e6f_A Dihydroorotate dehydrog 88.9 3 0.0001 36.1 10.3 137 74-237 107-291 (314)
97 1tx2_A DHPS, dihydropteroate s 88.7 7 0.00024 34.1 12.4 162 38-237 39-223 (297)
98 3o1n_A 3-dehydroquinate dehydr 88.4 10 0.00034 32.6 13.2 151 67-236 50-211 (276)
99 4ay7_A Methylcobalamin\: coenz 88.4 12 0.00042 32.7 15.4 142 71-239 188-345 (348)
100 4g9p_A 4-hydroxy-3-methylbut-2 88.4 1.9 6.6E-05 39.2 8.8 81 76-157 41-148 (406)
101 3iv3_A Tagatose 1,6-diphosphat 88.3 13 0.00045 32.9 14.8 123 82-224 119-280 (332)
102 4fxs_A Inosine-5'-monophosphat 88.0 4.6 0.00016 37.7 11.5 65 77-153 234-299 (496)
103 1vrd_A Inosine-5'-monophosphat 87.9 5.3 0.00018 36.9 11.9 69 75-155 238-307 (494)
104 1f76_A Dihydroorotate dehydrog 87.9 9.7 0.00033 33.2 13.1 140 70-236 150-335 (336)
105 3qja_A IGPS, indole-3-glycerol 87.8 2.9 0.0001 35.9 9.4 62 78-155 127-190 (272)
106 3ffs_A Inosine-5-monophosphate 87.6 3.2 0.00011 37.8 9.9 66 76-154 146-212 (400)
107 1thf_D HISF protein; thermophI 87.6 1.6 5.5E-05 36.3 7.4 100 77-183 87-203 (253)
108 3hbl_A Pyruvate carboxylase; T 87.4 14 0.00046 38.2 15.4 99 79-181 633-743 (1150)
109 2hsa_B 12-oxophytodienoate red 87.2 12 0.00042 33.8 13.6 74 135-215 173-273 (402)
110 3fa4_A 2,3-dimethylmalate lyas 86.9 0.63 2.1E-05 40.9 4.6 83 77-171 174-260 (302)
111 4avf_A Inosine-5'-monophosphat 86.9 6.4 0.00022 36.6 11.8 67 75-153 230-297 (490)
112 1b73_A Glutamate racemase; iso 86.8 6.1 0.00021 33.2 10.7 150 66-237 42-192 (254)
113 2dwu_A Glutamate racemase; iso 86.6 5.5 0.00019 34.0 10.4 159 61-242 45-207 (276)
114 1w8s_A FBP aldolase, fructose- 86.6 9.8 0.00033 32.3 11.9 135 79-237 98-247 (263)
115 2ze3_A DFA0005; organic waste 86.5 0.71 2.4E-05 40.0 4.7 39 75-118 170-208 (275)
116 1f8m_A Isocitrate lyase, ICL; 86.5 2.8 9.6E-05 38.5 8.8 32 78-110 272-304 (429)
117 1ep3_A Dihydroorotate dehydrog 86.2 15 0.00051 31.3 15.1 134 75-237 113-287 (311)
118 1mzh_A Deoxyribose-phosphate a 86.0 6.3 0.00021 32.6 10.2 149 67-243 18-178 (225)
119 3f4w_A Putative hexulose 6 pho 86.0 12 0.0004 30.0 13.6 89 78-178 18-108 (211)
120 1h5y_A HISF; histidine biosynt 85.6 1.4 4.9E-05 36.2 6.0 101 78-183 91-206 (253)
121 2jfq_A Glutamate racemase; cel 85.6 6.8 0.00023 33.6 10.6 155 60-238 59-219 (286)
122 3glc_A Aldolase LSRF; TIM barr 85.6 12 0.00041 32.5 12.1 116 82-224 134-257 (295)
123 1jcn_A Inosine monophosphate d 85.5 23 0.00078 32.8 15.8 93 76-183 257-366 (514)
124 1eep_A Inosine 5'-monophosphat 85.4 7.3 0.00025 35.1 11.1 66 76-153 155-221 (404)
125 2eja_A URO-D, UPD, uroporphyri 85.4 18 0.0006 31.4 17.6 138 71-240 177-335 (338)
126 3hgj_A Chromate reductase; TIM 85.3 5.8 0.0002 35.1 10.2 136 69-220 37-257 (349)
127 1eye_A DHPS 1, dihydropteroate 85.2 17 0.00059 31.2 16.8 152 37-217 4-170 (280)
128 2cw6_A Hydroxymethylglutaryl-C 85.2 5.1 0.00017 34.6 9.6 99 78-180 85-207 (298)
129 1qo2_A Molecule: N-((5-phospho 85.0 4.7 0.00016 33.3 9.0 99 78-183 87-196 (241)
130 3dxi_A Putative aldolase; TIM 84.9 12 0.00041 32.8 12.0 92 83-180 97-193 (320)
131 3tr9_A Dihydropteroate synthas 84.9 19 0.00067 31.5 13.2 160 38-229 27-213 (314)
132 3fok_A Uncharacterized protein 84.8 20 0.00067 31.4 13.6 121 75-217 73-215 (307)
133 1z41_A YQJM, probable NADH-dep 84.7 20 0.00067 31.4 13.6 150 66-239 134-326 (338)
134 1p0k_A Isopentenyl-diphosphate 84.6 15 0.0005 32.2 12.5 95 75-179 75-184 (349)
135 2pcq_A Putative dihydrodipicol 84.4 4.1 0.00014 35.0 8.5 99 66-183 16-128 (283)
136 3cyv_A URO-D, UPD, uroporphyri 84.1 11 0.00036 33.1 11.4 142 70-240 184-348 (354)
137 3khj_A Inosine-5-monophosphate 84.1 17 0.00058 32.4 12.7 65 76-153 107-172 (361)
138 1y0e_A Putative N-acetylmannos 84.0 7.3 0.00025 31.6 9.6 110 78-220 80-202 (223)
139 3ist_A Glutamate racemase; str 83.8 7.3 0.00025 33.3 9.8 52 61-118 43-95 (269)
140 3ovp_A Ribulose-phosphate 3-ep 83.7 9.9 0.00034 31.6 10.4 85 77-171 21-111 (228)
141 1rd5_A Tryptophan synthase alp 83.6 17 0.00058 30.3 12.0 24 158-181 79-104 (262)
142 1ka9_F Imidazole glycerol phos 83.2 2.4 8.3E-05 35.2 6.4 99 78-183 89-204 (252)
143 3nav_A Tryptophan synthase alp 83.1 8 0.00027 33.2 9.8 90 78-178 117-213 (271)
144 2vvt_A Glutamate racemase; iso 83.1 13 0.00045 31.9 11.3 158 60-238 61-220 (290)
145 3lg3_A Isocitrate lyase; conse 82.3 7.2 0.00025 35.9 9.5 75 78-156 276-354 (435)
146 3bg3_A Pyruvate carboxylase, m 82.3 11 0.00038 36.8 11.5 100 78-181 202-313 (718)
147 2ftp_A Hydroxymethylglutaryl-C 82.1 24 0.0008 30.4 16.1 101 77-184 87-216 (302)
148 1tv5_A Dhodehase, dihydroorota 81.9 31 0.0011 31.6 15.2 20 200-219 309-328 (443)
149 1tv5_A Dhodehase, dihydroorota 81.9 19 0.00065 33.1 12.4 98 114-237 296-420 (443)
150 2vp8_A Dihydropteroate synthas 81.8 26 0.0009 30.7 13.4 119 38-184 41-171 (318)
151 3tdn_A FLR symmetric alpha-bet 81.7 0.47 1.6E-05 39.8 1.4 100 77-183 92-208 (247)
152 1geq_A Tryptophan synthase alp 81.7 8.5 0.00029 31.8 9.3 88 76-176 98-194 (248)
153 3gr7_A NADPH dehydrogenase; fl 81.6 25 0.00084 30.9 12.7 150 66-239 134-326 (340)
154 3b8i_A PA4872 oxaloacetate dec 81.4 0.86 3E-05 39.7 3.0 37 77-118 172-208 (287)
155 2y88_A Phosphoribosyl isomeras 81.4 3 0.0001 34.4 6.3 99 77-183 87-201 (244)
156 2yw3_A 4-hydroxy-2-oxoglutarat 81.4 12 0.0004 30.5 9.8 120 77-237 74-197 (207)
157 2yr1_A 3-dehydroquinate dehydr 81.1 24 0.00082 29.8 15.3 149 67-233 30-188 (257)
158 1nvm_A HOA, 4-hydroxy-2-oxoval 81.1 8.4 0.00029 34.0 9.4 97 79-181 99-202 (345)
159 2w6r_A Imidazole glycerol phos 80.9 4.7 0.00016 33.7 7.4 140 78-238 88-247 (266)
160 1j93_A UROD, uroporphyrinogen 80.8 28 0.00095 30.3 14.6 142 70-240 190-351 (353)
161 2inf_A URO-D, UPD, uroporphyri 80.6 29 0.00098 30.4 15.0 138 70-239 190-348 (359)
162 2xed_A Putative maleate isomer 80.6 18 0.00061 30.7 11.1 156 66-244 67-237 (273)
163 1qpo_A Quinolinate acid phosph 80.2 4 0.00014 35.4 6.8 65 78-155 206-270 (284)
164 1o94_A Tmadh, trimethylamine d 80.1 26 0.00089 33.9 13.4 106 69-183 39-226 (729)
165 1rd5_A Tryptophan synthase alp 80.0 25 0.00085 29.3 12.1 45 75-120 34-100 (262)
166 3i4e_A Isocitrate lyase; struc 80.0 3 0.0001 38.4 6.2 33 78-111 276-309 (439)
167 1u83_A Phosphosulfolactate syn 79.9 6.3 0.00021 34.0 7.8 134 66-219 50-189 (276)
168 2oho_A Glutamate racemase; iso 79.8 16 0.00053 31.0 10.5 54 60-118 49-102 (273)
169 3fgn_A Dethiobiotin synthetase 79.8 12 0.00042 31.4 9.7 118 66-212 111-241 (251)
170 1o4u_A Type II quinolic acid p 79.7 2.7 9.3E-05 36.5 5.6 61 82-155 209-269 (285)
171 3l5l_A Xenobiotic reductase A; 79.7 15 0.0005 32.7 10.7 150 66-238 148-343 (363)
172 1r3s_A URO-D, uroporphyrinogen 79.7 31 0.0011 30.3 14.9 140 71-239 195-359 (367)
173 3bo9_A Putative nitroalkan dio 79.7 15 0.00052 32.0 10.6 83 76-177 92-180 (326)
174 4af0_A Inosine-5'-monophosphat 79.6 7.8 0.00027 36.7 9.0 47 75-121 282-329 (556)
175 1to3_A Putative aldolase YIHT; 79.5 30 0.001 29.9 14.0 148 70-237 46-216 (304)
176 1yxy_A Putative N-acetylmannos 79.4 5.1 0.00018 32.9 7.1 110 77-220 92-213 (234)
177 1vyr_A Pentaerythritol tetrani 79.3 33 0.0011 30.3 17.8 97 135-237 163-293 (364)
178 3vnd_A TSA, tryptophan synthas 79.2 8.6 0.0003 32.9 8.6 90 78-178 115-211 (267)
179 3eoo_A Methylisocitrate lyase; 79.0 32 0.0011 29.9 12.7 98 78-183 103-217 (298)
180 3usb_A Inosine-5'-monophosphat 78.9 34 0.0012 31.8 13.3 66 76-153 258-324 (511)
181 4e38_A Keto-hydroxyglutarate-a 78.9 8.7 0.0003 32.2 8.3 101 78-219 98-199 (232)
182 2qjg_A Putative aldolase MJ040 78.7 27 0.00094 29.0 13.0 141 78-237 50-201 (273)
183 3rpd_A Methionine synthase (B1 78.7 7.4 0.00025 34.7 8.3 143 69-226 167-328 (357)
184 3eol_A Isocitrate lyase; seatt 78.4 3 0.0001 38.4 5.7 33 78-111 271-304 (433)
185 1o66_A 3-methyl-2-oxobutanoate 78.4 32 0.0011 29.6 12.9 114 38-179 78-202 (275)
186 4exq_A UPD, URO-D, uroporphyri 78.3 32 0.0011 30.5 12.4 140 71-239 195-357 (368)
187 2qiw_A PEP phosphonomutase; st 78.1 0.95 3.2E-05 38.7 2.1 37 77-118 172-208 (255)
188 2y5s_A DHPS, dihydropteroate s 77.9 33 0.0011 29.7 12.0 174 38-238 22-214 (294)
189 3i65_A Dihydroorotate dehydrog 77.8 20 0.00069 32.6 11.0 67 136-219 202-300 (415)
190 1ur4_A Galactanase; hydrolase, 77.7 40 0.0014 30.4 20.3 112 66-182 130-269 (399)
191 1vzw_A Phosphoribosyl isomeras 77.7 26 0.0009 28.6 11.1 137 78-237 37-189 (244)
192 3inp_A D-ribulose-phosphate 3- 77.7 5.8 0.0002 33.6 7.0 85 77-171 44-133 (246)
193 3vav_A 3-methyl-2-oxobutanoate 77.7 2.4 8.2E-05 36.7 4.6 41 72-118 172-212 (275)
194 2nu8_B SCS-beta, succinyl-COA 77.6 28 0.00097 31.2 11.9 81 66-161 293-377 (388)
195 2ze3_A DFA0005; organic waste 77.6 32 0.0011 29.4 11.8 102 67-178 90-209 (275)
196 2r14_A Morphinone reductase; H 77.6 14 0.00049 33.0 9.9 96 135-237 168-298 (377)
197 1qop_A Tryptophan synthase alp 77.5 12 0.00041 31.7 9.0 91 76-171 34-146 (268)
198 1ep3_A Dihydroorotate dehydrog 77.3 32 0.0011 29.1 12.4 71 105-181 89-172 (311)
199 1jvn_A Glutamine, bifunctional 77.2 5.9 0.0002 37.4 7.6 101 78-183 352-504 (555)
200 3r2g_A Inosine 5'-monophosphat 77.2 12 0.00042 33.4 9.3 66 75-153 101-168 (361)
201 2ekc_A AQ_1548, tryptophan syn 77.1 20 0.0007 30.1 10.3 91 76-171 34-146 (262)
202 2v82_A 2-dehydro-3-deoxy-6-pho 76.4 27 0.00094 27.8 12.1 83 78-183 72-156 (212)
203 3bw2_A 2-nitropropane dioxygen 76.4 20 0.00067 31.7 10.5 86 75-178 111-213 (369)
204 1ps9_A 2,4-dienoyl-COA reducta 76.2 27 0.00092 33.3 12.1 113 66-183 131-288 (671)
205 3zwt_A Dihydroorotate dehydrog 76.1 42 0.0014 29.8 14.0 139 73-238 164-346 (367)
206 1ydo_A HMG-COA lyase; TIM-barr 75.9 7.6 0.00026 33.8 7.4 99 78-180 86-208 (307)
207 3khj_A Inosine-5-monophosphate 75.8 31 0.0011 30.6 11.6 81 84-178 68-150 (361)
208 3bg3_A Pyruvate carboxylase, m 75.8 62 0.0021 31.6 14.8 159 67-240 123-302 (718)
209 2dqw_A Dihydropteroate synthas 75.7 25 0.00085 30.5 10.6 156 38-219 28-195 (294)
210 1ydn_A Hydroxymethylglutaryl-C 75.5 37 0.0013 28.9 15.1 151 66-242 23-198 (295)
211 1gte_A Dihydropyrimidine dehyd 75.4 19 0.00066 36.4 11.2 68 107-180 627-710 (1025)
212 3nav_A Tryptophan synthase alp 75.1 18 0.0006 31.0 9.4 98 129-237 61-173 (271)
213 3l0g_A Nicotinate-nucleotide p 75.1 5.1 0.00017 35.1 6.0 62 78-155 219-280 (300)
214 3tqv_A Nicotinate-nucleotide p 74.9 5.2 0.00018 34.8 6.0 61 78-154 210-270 (287)
215 2gou_A Oxidoreductase, FMN-bin 74.9 32 0.0011 30.5 11.4 97 135-238 163-293 (365)
216 1rpx_A Protein (ribulose-phosp 74.8 17 0.00059 29.5 9.1 85 76-171 26-117 (230)
217 1u1j_A 5-methyltetrahydroptero 74.4 23 0.00077 34.9 11.1 133 68-226 181-331 (765)
218 2b7n_A Probable nicotinate-nuc 73.9 5.4 0.00018 34.2 5.8 58 83-153 199-256 (273)
219 3ajx_A 3-hexulose-6-phosphate 73.9 31 0.0011 27.3 12.3 109 79-220 70-184 (207)
220 2gjl_A Hypothetical protein PA 73.9 35 0.0012 29.4 11.3 84 76-178 86-177 (328)
221 2ftp_A Hydroxymethylglutaryl-C 73.6 43 0.0015 28.7 14.8 151 66-242 27-202 (302)
222 2gjl_A Hypothetical protein PA 73.6 41 0.0014 28.9 11.7 93 79-180 32-125 (328)
223 1xg4_A Probable methylisocitra 73.3 45 0.0015 28.8 11.8 104 67-182 92-212 (295)
224 2qgh_A Diaminopimelate decarbo 73.2 26 0.0009 31.4 10.6 71 82-155 120-204 (425)
225 3paj_A Nicotinate-nucleotide p 73.2 10 0.00035 33.4 7.5 59 81-155 246-304 (320)
226 2jbm_A Nicotinate-nucleotide p 72.9 5.9 0.0002 34.5 5.9 59 82-153 213-271 (299)
227 3kru_A NADH:flavin oxidoreduct 72.8 20 0.0007 31.6 9.5 110 66-178 133-282 (343)
228 1gte_A Dihydropyrimidine dehyd 72.7 41 0.0014 33.9 12.9 72 73-153 648-734 (1025)
229 1yxy_A Putative N-acetylmannos 72.7 37 0.0013 27.5 13.6 93 77-180 40-140 (234)
230 3eeg_A 2-isopropylmalate synth 72.5 49 0.0017 28.8 14.3 148 66-241 25-193 (325)
231 1zco_A 2-dehydro-3-deoxyphosph 72.2 44 0.0015 28.2 11.9 147 77-239 41-257 (262)
232 2ocz_A 3-dehydroquinate dehydr 72.2 41 0.0014 27.8 11.1 100 67-182 76-182 (231)
233 2z6i_A Trans-2-enoyl-ACP reduc 71.9 21 0.00071 31.1 9.3 85 75-178 77-167 (332)
234 2z6i_A Trans-2-enoyl-ACP reduc 71.7 28 0.00096 30.2 10.1 86 80-179 30-116 (332)
235 3tsm_A IGPS, indole-3-glycerol 71.3 16 0.00055 31.3 8.2 63 78-155 134-197 (272)
236 3b0p_A TRNA-dihydrouridine syn 70.5 39 0.0013 29.7 10.8 102 74-183 71-205 (350)
237 3i65_A Dihydroorotate dehydrog 70.2 57 0.002 29.6 12.0 141 71-238 197-393 (415)
238 2y88_A Phosphoribosyl isomeras 70.1 19 0.00064 29.4 8.3 79 77-169 35-121 (244)
239 1mxs_A KDPG aldolase; 2-keto-3 70.0 32 0.0011 28.4 9.6 109 77-229 89-202 (225)
240 2cw6_A Hydroxymethylglutaryl-C 70.0 51 0.0017 28.1 12.2 150 66-241 24-198 (298)
241 2ztj_A Homocitrate synthase; ( 69.9 41 0.0014 30.0 11.0 98 79-181 80-197 (382)
242 1m3u_A 3-methyl-2-oxobutanoate 69.8 5 0.00017 34.5 4.6 41 72-118 160-200 (264)
243 3k30_A Histamine dehydrogenase 69.6 43 0.0015 32.0 11.8 111 66-178 146-299 (690)
244 2c6q_A GMP reductase 2; TIM ba 69.3 55 0.0019 28.8 11.6 65 77-153 121-188 (351)
245 3gka_A N-ethylmaleimide reduct 69.1 40 0.0014 29.9 10.6 92 138-238 166-287 (361)
246 1oy0_A Ketopantoate hydroxymet 69.0 46 0.0016 28.7 10.6 94 76-179 116-220 (281)
247 1o66_A 3-methyl-2-oxobutanoate 68.8 56 0.0019 28.0 12.5 148 79-238 30-196 (275)
248 3ih1_A Methylisocitrate lyase; 68.7 58 0.002 28.3 12.5 94 78-181 109-219 (305)
249 3m47_A Orotidine 5'-phosphate 68.7 11 0.00037 31.3 6.4 35 78-112 83-117 (228)
250 1qwg_A PSL synthase;, (2R)-pho 68.7 17 0.00058 30.9 7.6 135 66-219 23-165 (251)
251 3vkj_A Isopentenyl-diphosphate 68.7 64 0.0022 28.7 14.3 142 72-234 75-232 (368)
252 2yxb_A Coenzyme B12-dependent 68.5 21 0.00073 27.7 7.8 45 133-178 56-105 (161)
253 3ru6_A Orotidine 5'-phosphate 68.3 51 0.0018 28.6 10.9 98 78-184 95-202 (303)
254 1mzh_A Deoxyribose-phosphate a 68.0 47 0.0016 27.2 10.2 120 81-223 78-205 (225)
255 3lye_A Oxaloacetate acetyl hyd 67.7 62 0.0021 28.2 15.6 92 78-178 108-220 (307)
256 2csu_A 457AA long hypothetical 67.7 62 0.0021 29.5 11.9 84 74-170 355-446 (457)
257 3uhf_A Glutamate racemase; str 67.3 15 0.0005 31.5 7.1 34 60-94 61-94 (274)
258 1i4n_A Indole-3-glycerol phosp 67.3 23 0.00079 29.9 8.3 64 78-156 115-180 (251)
259 3ldv_A Orotidine 5'-phosphate 67.2 57 0.0019 27.5 13.3 123 100-238 66-194 (255)
260 3tha_A Tryptophan synthase alp 67.1 39 0.0013 28.6 9.6 91 75-178 105-204 (252)
261 3igs_A N-acetylmannosamine-6-p 66.8 53 0.0018 27.1 18.1 92 76-179 39-135 (232)
262 3kru_A NADH:flavin oxidoreduct 66.6 67 0.0023 28.2 14.9 109 68-183 36-220 (343)
263 1ccw_A Protein (glutamate muta 66.6 25 0.00087 26.4 7.7 38 133-171 41-81 (137)
264 2qf7_A Pyruvate carboxylase pr 66.5 94 0.0032 32.0 14.0 151 78-239 578-749 (1165)
265 3gnn_A Nicotinate-nucleotide p 66.2 9.6 0.00033 33.3 5.7 61 79-155 222-282 (298)
266 3ixl_A Amdase, arylmalonate de 65.9 56 0.0019 27.0 12.7 150 66-238 43-205 (240)
267 2qiw_A PEP phosphonomutase; st 65.9 59 0.002 27.4 10.6 97 78-178 98-209 (255)
268 1nvm_A HOA, 4-hydroxy-2-oxoval 65.6 69 0.0024 27.9 14.1 145 66-240 27-190 (345)
269 1wa3_A 2-keto-3-deoxy-6-phosph 65.5 37 0.0013 26.8 9.0 82 79-183 76-158 (205)
270 3rmj_A 2-isopropylmalate synth 65.3 57 0.0019 29.0 10.9 98 78-181 92-212 (370)
271 2zbt_A Pyridoxal biosynthesis 65.3 11 0.00039 32.1 6.1 19 134-154 134-152 (297)
272 3ble_A Citramalate synthase fr 65.1 20 0.00069 31.4 7.8 97 79-181 102-221 (337)
273 3sy1_A UPF0001 protein YGGS; e 64.4 23 0.0008 29.6 7.7 65 91-156 100-167 (245)
274 1x1o_A Nicotinate-nucleotide p 64.1 20 0.00067 31.0 7.3 56 82-153 212-267 (286)
275 3l5a_A NADH/flavin oxidoreduct 64.1 49 0.0017 30.0 10.3 160 69-243 61-321 (419)
276 4ab4_A Xenobiotic reductase B; 64.0 47 0.0016 29.5 10.0 92 138-238 158-279 (362)
277 1ypf_A GMP reductase; GUAC, pu 64.0 73 0.0025 27.6 11.9 94 77-184 109-219 (336)
278 3n3m_A Orotidine 5'-phosphate 63.8 5.1 0.00017 35.7 3.6 147 77-237 108-275 (342)
279 1ypx_A Putative vitamin-B12 in 63.8 40 0.0014 30.0 9.6 144 68-226 162-337 (375)
280 2o0t_A Diaminopimelate decarbo 63.8 45 0.0015 30.4 10.2 70 84-156 130-215 (467)
281 4f2d_A L-arabinose isomerase; 63.7 35 0.0012 31.8 9.5 51 134-188 59-115 (500)
282 2jfz_A Glutamate racemase; cel 63.7 12 0.00042 31.3 5.9 53 61-118 38-90 (255)
283 3out_A Glutamate racemase; str 63.7 15 0.00052 31.2 6.5 33 61-94 45-77 (268)
284 3eeg_A 2-isopropylmalate synth 63.5 24 0.00083 30.8 8.0 73 102-180 125-205 (325)
285 3of5_A Dethiobiotin synthetase 63.4 22 0.00074 29.2 7.3 87 85-180 109-206 (228)
286 1f6y_A 5-methyltetrahydrofolat 63.2 68 0.0023 27.0 14.2 117 78-217 30-153 (262)
287 1ur1_A Endoxylanase; hydrolase 63.0 16 0.00054 32.8 6.8 50 73-124 209-266 (378)
288 1sfl_A 3-dehydroquinate dehydr 62.9 64 0.0022 26.7 13.1 126 78-219 22-159 (238)
289 1vyr_A Pentaerythritol tetrani 62.8 81 0.0028 27.8 12.0 145 68-235 156-338 (364)
290 3qw3_A Orotidine-5-phosphate d 62.8 66 0.0023 27.1 10.3 146 72-238 31-192 (255)
291 2gou_A Oxidoreductase, FMN-bin 62.7 72 0.0025 28.1 11.0 147 66-235 151-337 (365)
292 3nl6_A Thiamine biosynthetic b 62.7 25 0.00085 33.1 8.3 86 75-165 27-125 (540)
293 2fp4_B Succinyl-COA ligase [GD 62.1 54 0.0019 29.4 10.2 67 66-144 300-370 (395)
294 1oy0_A Ketopantoate hydroxymet 62.0 8.1 0.00028 33.4 4.4 41 72-118 178-218 (281)
295 1dqu_A Isocitrate lyase; beta 61.5 10 0.00035 35.8 5.3 59 84-144 386-448 (538)
296 3bo9_A Putative nitroalkan dio 61.5 79 0.0027 27.3 11.0 87 79-178 43-129 (326)
297 3tha_A Tryptophan synthase alp 61.5 19 0.00066 30.5 6.6 155 75-235 30-219 (252)
298 3mcm_A 2-amino-4-hydroxy-6-hyd 61.5 99 0.0034 28.3 14.0 159 37-219 189-364 (442)
299 3ewb_X 2-isopropylmalate synth 61.3 54 0.0019 28.0 9.7 63 77-143 154-220 (293)
300 1vli_A Spore coat polysacchari 61.2 52 0.0018 29.6 9.8 100 73-181 101-225 (385)
301 3l5l_A Xenobiotic reductase A; 61.2 13 0.00044 33.0 5.8 74 138-220 163-264 (363)
302 2uwf_A Endoxylanase, alkaline 60.8 17 0.00058 32.3 6.5 51 72-124 201-259 (356)
303 4adt_A Pyridoxine biosynthetic 60.5 3.7 0.00013 35.9 2.0 64 76-155 90-153 (297)
304 1eep_A Inosine 5'-monophosphat 60.1 49 0.0017 29.5 9.6 42 136-178 155-199 (404)
305 1r85_A Endo-1,4-beta-xylanase; 60.0 18 0.00063 32.3 6.6 51 73-125 212-270 (379)
306 1pii_A N-(5'phosphoribosyl)ant 59.8 37 0.0013 31.2 8.8 64 78-156 122-186 (452)
307 3ufx_B Succinyl-COA synthetase 59.8 45 0.0015 30.0 9.2 85 66-168 284-373 (397)
308 1ydo_A HMG-COA lyase; TIM-barr 59.3 86 0.0029 27.0 13.4 44 199-242 154-200 (307)
309 3lab_A Putative KDPG (2-keto-3 59.3 52 0.0018 27.2 8.8 104 78-221 77-186 (217)
310 3r79_A Uncharacterized protein 59.3 71 0.0024 26.6 9.8 92 91-183 100-199 (244)
311 1ujp_A Tryptophan synthase alp 59.0 23 0.00079 30.1 6.8 90 78-178 111-207 (271)
312 1fob_A Beta-1,4-galactanase; B 58.6 90 0.0031 27.0 14.5 109 70-183 109-249 (334)
313 2fds_A Orotidine-monophosphate 58.6 16 0.00054 32.6 5.8 151 73-237 106-277 (352)
314 3tjx_A Dihydroorotate dehydrog 58.5 59 0.002 28.4 9.7 57 114-179 126-199 (354)
315 3iwp_A Copper homeostasis prot 58.3 60 0.0021 28.0 9.3 109 67-184 106-218 (287)
316 4ab4_A Xenobiotic reductase B; 58.2 80 0.0027 28.0 10.5 107 66-178 143-284 (362)
317 1ka9_F Imidazole glycerol phos 58.1 44 0.0015 27.2 8.3 80 77-168 35-121 (252)
318 3ble_A Citramalate synthase fr 58.1 72 0.0025 27.8 10.1 65 73-143 169-236 (337)
319 3vnd_A TSA, tryptophan synthas 57.9 42 0.0015 28.5 8.3 100 130-238 60-172 (267)
320 3txv_A Probable tagatose 6-pho 57.1 54 0.0018 30.2 9.2 86 134-226 7-98 (450)
321 2nq5_A 5-methyltetrahydroptero 57.1 81 0.0028 30.9 11.1 128 69-224 177-320 (755)
322 1twd_A Copper homeostasis prot 56.5 92 0.0031 26.4 10.3 105 67-184 68-179 (256)
323 3jr2_A Hexulose-6-phosphate sy 56.3 62 0.0021 26.0 8.8 94 78-182 24-119 (218)
324 2nx9_A Oxaloacetate decarboxyl 56.3 48 0.0017 30.5 8.9 64 73-143 158-224 (464)
325 1qap_A Quinolinic acid phospho 56.1 23 0.00079 30.7 6.4 57 82-154 224-280 (296)
326 2p10_A MLL9387 protein; putati 55.9 57 0.002 28.2 8.7 72 77-156 174-261 (286)
327 3gka_A N-ethylmaleimide reduct 55.7 83 0.0028 27.8 10.2 106 67-178 155-292 (361)
328 1jcn_A Inosine monophosphate d 55.6 37 0.0013 31.3 8.2 64 134-219 255-321 (514)
329 3fk8_A Disulphide isomerase; A 55.5 20 0.0007 25.8 5.2 114 93-211 10-131 (133)
330 2dep_A Xylanase B, thermostabl 55.4 23 0.0008 31.3 6.5 50 73-124 201-258 (356)
331 2og9_A Mandelate racemase/muco 55.4 96 0.0033 27.4 10.6 148 67-230 162-324 (393)
332 2agk_A 1-(5-phosphoribosyl)-5- 55.3 19 0.00064 30.5 5.6 96 79-183 90-213 (260)
333 3cpg_A Uncharacterized protein 55.2 27 0.00091 29.6 6.6 64 92-156 138-204 (282)
334 1zfj_A Inosine monophosphate d 55.1 1.2E+02 0.0042 27.4 12.1 67 76-154 235-302 (491)
335 3q58_A N-acetylmannosamine-6-p 55.0 87 0.003 25.7 15.9 92 76-179 39-135 (229)
336 3b8i_A PA4872 oxaloacetate dec 54.9 1E+02 0.0035 26.4 14.0 94 78-180 102-211 (287)
337 2vef_A Dihydropteroate synthas 54.8 1.1E+02 0.0036 26.6 11.1 120 37-182 8-138 (314)
338 1tqj_A Ribulose-phosphate 3-ep 54.7 27 0.00092 28.7 6.4 48 77-125 21-73 (230)
339 2p10_A MLL9387 protein; putati 54.5 1E+02 0.0034 26.6 10.0 36 114-156 94-129 (286)
340 4avf_A Inosine-5'-monophosphat 54.4 37 0.0013 31.3 7.9 63 78-154 283-361 (490)
341 2yv4_A Hypothetical protein PH 54.4 18 0.00063 26.2 4.7 45 67-111 53-97 (105)
342 4fxs_A Inosine-5'-monophosphat 54.1 35 0.0012 31.6 7.7 65 77-155 284-364 (496)
343 2ekc_A AQ_1548, tryptophan syn 54.0 95 0.0033 25.8 14.0 78 158-236 78-169 (262)
344 1n82_A Xylanase, intra-cellula 53.8 26 0.0009 30.5 6.5 51 72-124 187-245 (331)
345 1w32_A Endo-1,4-beta-xylanase 53.4 24 0.00083 31.1 6.2 50 73-124 192-251 (348)
346 3nvt_A 3-deoxy-D-arabino-heptu 53.3 1.3E+02 0.0043 27.0 13.9 43 77-121 160-213 (385)
347 3ewb_X 2-isopropylmalate synth 53.3 1.1E+02 0.0036 26.2 15.0 148 66-241 24-192 (293)
348 2rdx_A Mandelate racemase/muco 53.2 80 0.0027 27.7 9.7 49 135-184 149-200 (379)
349 1dbt_A Orotidine 5'-phosphate 53.2 65 0.0022 26.4 8.6 75 102-184 44-125 (239)
350 1wbh_A KHG/KDPG aldolase; lyas 53.2 53 0.0018 26.7 7.9 113 77-230 79-193 (214)
351 1qo2_A Molecule: N-((5-phospho 52.3 92 0.0032 25.2 9.7 73 78-164 35-115 (241)
352 2r14_A Morphinone reductase; H 52.3 1.1E+02 0.0038 27.0 10.5 144 68-234 161-342 (377)
353 3sz8_A 2-dehydro-3-deoxyphosph 51.8 1.1E+02 0.0036 26.4 9.8 65 114-183 134-205 (285)
354 3fa4_A 2,3-dimethylmalate lyas 51.3 1.2E+02 0.0041 26.2 15.9 94 78-178 100-212 (302)
355 2jfn_A Glutamate racemase; cel 51.3 79 0.0027 26.7 9.0 54 60-118 58-112 (285)
356 3vav_A 3-methyl-2-oxobutanoate 51.1 1.2E+02 0.004 26.0 11.7 99 67-179 104-214 (275)
357 1hjs_A Beta-1,4-galactanase; 4 50.9 1.2E+02 0.0042 26.2 14.9 102 69-178 107-243 (332)
358 2wlt_A L-asparaginase; hydrola 50.8 34 0.0012 30.0 6.7 49 78-128 234-285 (332)
359 3n2b_A Diaminopimelate decarbo 50.6 1.1E+02 0.0036 27.7 10.3 70 83-155 140-223 (441)
360 3usb_A Inosine-5'-monophosphat 50.6 38 0.0013 31.5 7.3 65 78-155 310-389 (511)
361 3rmj_A 2-isopropylmalate synth 50.6 71 0.0024 28.4 8.8 66 73-142 157-226 (370)
362 2czd_A Orotidine 5'-phosphate 50.4 94 0.0032 24.7 9.8 131 85-237 21-153 (208)
363 2pp0_A L-talarate/galactarate 50.3 1.1E+02 0.0039 27.0 10.3 148 67-230 175-337 (398)
364 1zlp_A PSR132, petal death pro 50.1 1.3E+02 0.0044 26.2 11.2 97 78-182 121-234 (318)
365 1rvk_A Isomerase/lactonizing e 49.9 1.3E+02 0.0045 26.2 12.0 144 67-226 149-314 (382)
366 1vhc_A Putative KHG/KDPG aldol 49.8 1.1E+02 0.0036 25.1 9.9 105 77-222 80-186 (224)
367 2eq5_A 228AA long hypothetical 49.8 64 0.0022 25.9 7.9 74 97-176 19-100 (228)
368 2egz_A 3-dehydroquinate dehydr 49.4 1.1E+02 0.0036 25.0 11.1 99 75-182 73-173 (219)
369 2wqp_A Polysialic acid capsule 49.3 85 0.0029 27.8 9.1 100 73-182 91-215 (349)
370 3ixl_A Amdase, arylmalonate de 49.3 13 0.00043 31.1 3.5 44 134-178 54-103 (240)
371 3iv3_A Tagatose 1,6-diphosphat 49.2 1.4E+02 0.0047 26.3 13.1 143 67-227 48-215 (332)
372 1i1w_A Endo-1,4-beta-xylanase; 49.1 39 0.0013 29.0 6.7 50 73-124 185-241 (303)
373 3qw4_B UMP synthase; N-termina 48.7 1.6E+02 0.0054 26.9 11.2 148 68-238 28-193 (453)
374 2poz_A Putative dehydratase; o 48.1 1.4E+02 0.0049 26.1 12.9 152 67-233 137-318 (392)
375 2ps2_A Putative mandelate race 48.0 1.3E+02 0.0045 26.1 10.2 50 134-184 146-201 (371)
376 3fs2_A 2-dehydro-3-deoxyphosph 48.0 64 0.0022 28.0 7.8 62 114-181 155-222 (298)
377 1geq_A Tryptophan synthase alp 47.9 1.1E+02 0.0037 24.7 9.8 89 76-171 22-132 (248)
378 3u43_A Colicin-E2 immunity pro 47.4 16 0.00053 26.4 3.2 46 156-214 28-77 (94)
379 1qop_A Tryptophan synthase alp 47.3 59 0.002 27.2 7.5 90 78-178 114-210 (268)
380 3apt_A Methylenetetrahydrofola 47.0 1.4E+02 0.0048 25.7 10.1 52 67-122 158-209 (310)
381 1tqj_A Ribulose-phosphate 3-ep 46.9 31 0.0011 28.3 5.5 41 78-121 77-119 (230)
382 3t7v_A Methylornithine synthas 46.8 83 0.0028 27.1 8.6 16 208-223 286-301 (350)
383 3ffs_A Inosine-5-monophosphate 46.6 59 0.002 29.3 7.7 12 225-236 359-370 (400)
384 1o94_A Tmadh, trimethylamine d 46.5 1.7E+02 0.0056 28.2 11.4 110 66-178 139-296 (729)
385 1rqb_A Transcarboxylase 5S sub 46.2 74 0.0025 29.9 8.5 66 73-143 175-243 (539)
386 3hdg_A Uncharacterized protein 45.6 76 0.0026 22.3 7.7 73 86-170 51-124 (137)
387 3aty_A Tcoye, prostaglandin F2 45.3 1E+02 0.0036 27.3 9.1 111 65-178 162-312 (379)
388 3emz_A Xylanase, endo-1,4-beta 45.3 36 0.0012 29.8 6.0 47 73-121 187-240 (331)
389 3vni_A Xylose isomerase domain 45.2 72 0.0025 26.2 7.7 105 69-182 128-248 (294)
390 3fok_A Uncharacterized protein 44.9 1.6E+02 0.0053 25.7 12.2 144 40-224 108-273 (307)
391 1h1y_A D-ribulose-5-phosphate 44.7 65 0.0022 26.1 7.2 85 79-177 80-177 (228)
392 2agk_A 1-(5-phosphoribosyl)-5- 44.6 21 0.00072 30.1 4.2 74 78-169 43-126 (260)
393 2c6q_A GMP reductase 2; TIM ba 44.4 49 0.0017 29.2 6.7 15 78-92 174-188 (351)
394 4djd_C C/Fe-SP, corrinoid/iron 44.1 1E+02 0.0035 28.3 8.9 83 85-181 126-209 (446)
395 3ivs_A Homocitrate synthase, m 44.0 1.8E+02 0.0063 26.3 12.3 121 79-222 116-255 (423)
396 2o7s_A DHQ-SDH PR, bifunctiona 43.9 35 0.0012 31.6 6.0 96 78-181 84-182 (523)
397 2hjp_A Phosphonopyruvate hydro 43.9 1.5E+02 0.0052 25.3 12.4 98 78-180 95-212 (290)
398 4ef8_A Dihydroorotate dehydrog 43.9 51 0.0017 29.2 6.7 127 84-237 153-324 (354)
399 1eix_A Orotidine 5'-monophosph 43.8 88 0.003 25.8 8.0 96 78-183 29-132 (245)
400 1m3u_A 3-methyl-2-oxobutanoate 43.7 1.5E+02 0.0051 25.1 11.6 90 80-179 101-202 (264)
401 1t7l_A 5-methyltetrahydroptero 43.5 83 0.0028 31.0 8.6 137 68-225 584-738 (766)
402 3qxc_A Dethiobiotin synthetase 43.4 93 0.0032 25.7 8.0 78 66-158 116-201 (242)
403 1y0e_A Putative N-acetylmannos 43.2 1.2E+02 0.0042 24.0 13.8 92 77-179 27-125 (223)
404 3bw2_A 2-nitropropane dioxygen 42.9 1.7E+02 0.0058 25.5 17.7 95 79-178 28-150 (369)
405 1vrd_A Inosine-5'-monophosphat 42.7 53 0.0018 30.0 7.0 14 79-92 292-305 (494)
406 1p1p_A AA-conotoxin PIVA; neur 42.7 7 0.00024 20.8 0.5 8 221-228 1-8 (26)
407 1xi3_A Thiamine phosphate pyro 42.6 1.2E+02 0.0041 23.7 9.1 43 134-178 117-167 (215)
408 3sgz_A Hydroxyacid oxidase 2; 42.5 48 0.0017 29.4 6.3 16 77-92 229-244 (352)
409 1o7j_A L-asparaginase; atomic 42.3 39 0.0013 29.5 5.7 49 78-128 233-284 (327)
410 1gxg_A Colicin E8 immunity pro 42.2 15 0.00053 25.9 2.4 43 159-214 30-76 (85)
411 1lc0_A Biliverdin reductase A; 42.2 44 0.0015 28.2 6.0 45 74-121 77-123 (294)
412 3tfx_A Orotidine 5'-phosphate 42.2 1.5E+02 0.0053 24.9 9.7 130 76-219 73-213 (259)
413 1us2_A Xylanase10C, endo-beta- 42.1 47 0.0016 31.2 6.5 50 73-124 360-417 (530)
414 3ff4_A Uncharacterized protein 42.1 54 0.0019 24.2 5.7 58 87-159 59-116 (122)
415 1h1y_A D-ribulose-5-phosphate 41.7 61 0.0021 26.3 6.5 48 77-125 23-75 (228)
416 2v82_A 2-dehydro-3-deoxy-6-pho 41.7 1.2E+02 0.0042 23.8 8.3 42 76-120 22-63 (212)
417 1eix_A Orotidine 5'-monophosph 41.7 1E+02 0.0035 25.4 8.0 103 78-184 84-193 (245)
418 1h5y_A HISF; histidine biosynt 41.6 1.3E+02 0.0045 23.9 9.1 81 76-168 36-123 (253)
419 1ypf_A GMP reductase; GUAC, pu 41.5 58 0.002 28.3 6.7 15 78-92 162-176 (336)
420 1rpx_A Protein (ribulose-phosp 41.2 63 0.0021 26.0 6.5 42 78-122 83-126 (230)
421 1ujp_A Tryptophan synthase alp 41.1 1.6E+02 0.0055 24.7 10.3 24 158-181 76-101 (271)
422 1v0l_A Endo-1,4-beta-xylanase 41.0 28 0.00097 30.1 4.5 20 99-120 216-235 (313)
423 2yci_X 5-methyltetrahydrofolat 40.5 1.7E+02 0.0057 24.7 18.2 146 38-217 9-162 (271)
424 3cu2_A Ribulose-5-phosphate 3- 40.4 37 0.0013 28.3 5.0 31 78-111 84-116 (237)
425 4ew6_A D-galactose-1-dehydroge 40.3 40 0.0014 29.0 5.5 36 75-111 94-131 (330)
426 3u3x_A Oxidoreductase; structu 40.1 50 0.0017 28.7 6.1 63 82-156 84-149 (361)
427 2nq5_A 5-methyltetrahydroptero 40.0 1.2E+02 0.0042 29.6 9.3 135 68-225 565-719 (755)
428 4fb5_A Probable oxidoreductase 39.9 33 0.0011 29.7 4.8 26 83-109 91-116 (393)
429 1nq6_A XYS1; glycoside hydrola 39.7 1.7E+02 0.0058 24.6 10.7 118 58-178 87-233 (302)
430 4e7p_A Response regulator; DNA 39.6 1E+02 0.0035 22.1 10.5 74 84-168 64-137 (150)
431 2zsk_A PH1733, 226AA long hypo 39.5 98 0.0034 24.9 7.5 130 69-219 56-189 (226)
432 3aty_A Tcoye, prostaglandin F2 39.5 1.2E+02 0.004 27.0 8.5 80 138-224 179-288 (379)
433 3ru6_A Orotidine 5'-phosphate 39.2 1.1E+02 0.0038 26.5 8.0 117 102-237 65-189 (303)
434 3mqt_A Mandelate racemase/muco 39.2 2E+02 0.0069 25.3 12.7 150 67-226 148-314 (394)
435 2nzl_A Hydroxyacid oxidase 1; 39.0 88 0.003 27.9 7.6 15 78-92 265-279 (392)
436 3sr7_A Isopentenyl-diphosphate 39.0 95 0.0033 27.5 7.8 98 69-179 102-212 (365)
437 3o9z_A Lipopolysaccaride biosy 38.9 40 0.0014 28.8 5.2 79 67-159 55-137 (312)
438 2nli_A Lactate oxidase; flavoe 38.8 1E+02 0.0035 27.2 7.9 16 77-92 241-256 (368)
439 1sgj_A Citrate lyase, beta sub 38.7 49 0.0017 28.0 5.6 46 75-121 83-128 (284)
440 1v5x_A PRA isomerase, phosphor 38.4 1.4E+02 0.0049 24.0 8.2 73 78-163 13-92 (203)
441 2fli_A Ribulose-phosphate 3-ep 38.3 50 0.0017 26.3 5.4 41 78-121 76-116 (220)
442 3gwq_A D-serine deaminase; str 37.9 1.2E+02 0.0042 27.1 8.5 67 85-156 139-210 (426)
443 3g8r_A Probable spore coat pol 37.9 1.1E+02 0.0038 27.0 8.0 98 73-180 78-200 (350)
444 2xed_A Putative maleate isomer 37.8 41 0.0014 28.4 5.0 44 133-177 77-131 (273)
445 2ffc_A Orotidine 5-monophospha 37.6 47 0.0016 29.6 5.4 88 72-167 115-210 (353)
446 2hsa_B 12-oxophytodienoate red 37.5 2.2E+02 0.0076 25.3 11.9 110 68-178 166-324 (402)
447 1nns_A L-asparaginase II; amid 37.3 76 0.0026 27.7 6.8 49 78-128 227-278 (326)
448 1vfs_A Alanine racemase; TIM-b 36.7 76 0.0026 27.9 6.8 60 93-155 102-167 (386)
449 2qgy_A Enolase from the enviro 36.7 2.2E+02 0.0074 25.0 13.4 152 67-232 149-313 (391)
450 3kto_A Response regulator rece 36.7 1.1E+02 0.0037 21.5 8.8 77 83-170 47-125 (136)
451 2vws_A YFAU, 2-keto-3-deoxy su 36.6 1.9E+02 0.0063 24.1 10.3 78 78-168 31-112 (267)
452 1mdl_A Mandelate racemase; iso 36.3 1.6E+02 0.0056 25.3 8.9 95 137-234 150-259 (359)
453 3mwd_A ATP-citrate synthase; A 36.2 72 0.0025 29.0 6.6 70 66-144 311-393 (425)
454 2bmb_A Folic acid synthesis pr 36.2 2.5E+02 0.0085 26.4 10.4 125 37-185 223-368 (545)
455 4gvf_A Beta-hexosaminidase; TI 36.2 44 0.0015 29.6 5.0 50 131-181 9-62 (349)
456 3e82_A Putative oxidoreductase 36.1 45 0.0016 29.0 5.2 36 75-111 80-117 (364)
457 4gqa_A NAD binding oxidoreduct 36.0 52 0.0018 29.0 5.6 32 83-118 93-124 (412)
458 2d59_A Hypothetical protein PH 36.0 96 0.0033 23.2 6.5 59 86-158 77-135 (144)
459 3mfq_A TROA, high-affinity zin 36.0 54 0.0019 27.8 5.5 48 66-119 196-243 (282)
460 1wsa_A Asparaginase, asparagin 35.9 51 0.0017 28.9 5.4 48 78-127 231-281 (330)
461 4f8x_A Endo-1,4-beta-xylanase; 35.9 86 0.003 27.4 6.9 48 72-121 190-245 (335)
462 3c2e_A Nicotinate-nucleotide p 35.7 15 0.00051 31.8 1.8 24 85-109 218-241 (294)
463 3tr2_A Orotidine 5'-phosphate 35.5 1.8E+02 0.0062 24.0 8.6 121 100-236 47-174 (239)
464 1fr2_A Colicin E9 immunity pro 35.5 32 0.0011 24.2 3.2 42 160-214 32-77 (86)
465 3ctl_A D-allulose-6-phosphate 35.5 87 0.003 25.8 6.5 46 78-125 18-68 (231)
466 3eul_A Possible nitrate/nitrit 35.4 1.2E+02 0.0041 21.7 9.9 73 85-168 60-132 (152)
467 3u7b_A Endo-1,4-beta-xylanase; 35.4 76 0.0026 27.6 6.5 47 73-121 184-245 (327)
468 3oa2_A WBPB; oxidoreductase, s 35.3 49 0.0017 28.3 5.2 47 67-118 55-101 (318)
469 3pzs_A PM kinase, pyridoxamine 35.3 1.1E+02 0.0036 25.6 7.3 53 58-111 49-102 (289)
470 3oqb_A Oxidoreductase; structu 35.1 40 0.0014 29.4 4.6 36 75-111 96-133 (383)
471 3ip3_A Oxidoreductase, putativ 35.0 54 0.0019 28.1 5.4 24 85-109 66-89 (337)
472 2yci_X 5-methyltetrahydrofolat 35.0 32 0.0011 29.3 3.8 83 137-223 38-133 (271)
473 3uuw_A Putative oxidoreductase 35.0 50 0.0017 27.8 5.1 14 97-110 102-115 (308)
474 2d1z_A Endo-1,4-beta-D-xylanas 34.9 35 0.0012 30.8 4.3 45 74-120 184-235 (436)
475 1tlt_A Putative oxidoreductase 34.8 70 0.0024 27.0 6.1 45 74-121 77-123 (319)
476 2zad_A Muconate cycloisomerase 34.7 2.2E+02 0.0074 24.4 9.4 146 76-233 144-303 (345)
477 3ohs_X Trans-1,2-dihydrobenzen 34.4 68 0.0023 27.4 5.9 44 75-121 79-124 (334)
478 3l52_A Orotidine 5'-phosphate 34.3 52 0.0018 28.3 5.1 149 67-229 44-212 (284)
479 3m47_A Orotidine 5'-phosphate 34.3 1.9E+02 0.0064 23.5 13.0 118 102-239 53-173 (228)
480 3ldv_A Orotidine 5'-phosphate 34.2 2.1E+02 0.007 24.0 12.4 99 79-184 98-206 (255)
481 4gmf_A Yersiniabactin biosynth 34.2 65 0.0022 28.5 5.9 76 75-156 83-160 (372)
482 3t7v_A Methylornithine synthas 33.9 2.2E+02 0.0076 24.2 15.6 125 66-239 91-228 (350)
483 4a29_A Engineered retro-aldol 33.9 1.5E+02 0.005 25.2 7.7 61 82-157 122-183 (258)
484 3l9c_A 3-dehydroquinate dehydr 33.7 2.1E+02 0.0072 23.9 11.8 93 78-182 114-213 (259)
485 3e18_A Oxidoreductase; dehydro 33.7 67 0.0023 27.8 5.9 24 85-109 64-87 (359)
486 2ox1_A 3-dehydroquinate dehydr 33.6 1.2E+02 0.004 24.4 6.9 94 67-182 56-152 (196)
487 3qz6_A HPCH/HPAI aldolase; str 33.5 2.1E+02 0.0071 23.8 10.4 78 78-168 29-110 (261)
488 1ct5_A Protein (yeast hypothet 33.4 84 0.0029 26.2 6.2 69 88-157 106-183 (256)
489 3gdo_A Uncharacterized oxidore 33.4 69 0.0023 27.7 5.9 36 75-111 78-115 (358)
490 2dsk_A Chitinase; catalytic do 33.4 1.4E+02 0.0048 25.8 7.8 72 67-139 95-166 (311)
491 3dm5_A SRP54, signal recogniti 33.3 2.8E+02 0.0095 25.2 13.3 100 77-184 173-276 (443)
492 1yx1_A Hypothetical protein PA 33.3 1.9E+02 0.0064 23.3 9.1 59 79-142 118-181 (264)
493 3kp1_A D-ornithine aminomutase 33.2 2.1E+02 0.007 27.9 9.3 94 128-245 639-741 (763)
494 4drs_A Pyruvate kinase; glycol 33.2 1.8E+02 0.0062 27.2 8.9 67 35-125 42-112 (526)
495 1nsj_A PRAI, phosphoribosyl an 33.2 1.5E+02 0.005 23.9 7.5 30 78-107 14-49 (205)
496 2ovl_A Putative racemase; stru 33.1 2.2E+02 0.0076 24.6 9.3 98 73-178 148-247 (371)
497 3kux_A Putative oxidoreductase 32.9 1.9E+02 0.0063 24.7 8.6 66 82-159 63-132 (352)
498 3ezy_A Dehydrogenase; structur 32.9 73 0.0025 27.3 5.9 45 74-121 76-122 (344)
499 4a0g_A Adenosylmethionine-8-am 32.6 1E+02 0.0034 30.5 7.4 104 66-181 175-293 (831)
500 1tqx_A D-ribulose-5-phosphate 32.6 1.8E+02 0.0061 23.8 8.0 86 78-164 23-133 (227)
No 1
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=100.00 E-value=1e-50 Score=390.30 Aligned_cols=206 Identities=25% Similarity=0.404 Sum_probs=185.2
Q ss_pred CHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCCCCCeEEEEecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 025860 1 MLRRSVEIAREARDMYFERCSKSSCDSVTDDRIPKHRPILVAASVGSYGAYLADGSEYSGNYGDAITVETLKDFHRRRVQ 80 (247)
Q Consensus 1 l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~VaGsiGP~g~~l~~g~eY~g~y~~~~s~~e~~~~~~~q~~ 80 (247)
|+++||+|||+|+++ + +|||||||+|.++ ++|++ +++++++++|++|++
T Consensus 85 l~~~av~lAr~a~~~----------------------~-~VAGsiGP~g~~~-------~~~~~-~~~~e~~~~~~~qi~ 133 (566)
T 1q7z_A 85 IVRNAVRIARRAAGE----------------------K-LVFGDIGPTGELP-------YPLGS-TLFEEFYENFRETVE 133 (566)
T ss_dssp HHHHHHHHHHHHHTT----------------------S-EEEEEECCCSCCB-------TTTSS-BCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhC----------------------C-eEEEeCCCcccCC-------CCCCC-CCHHHHHHHHHHHHH
Confidence 589999999999742 3 9999999999865 24554 799999999999999
Q ss_pred HHhcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEEcCC-Chh
Q 025860 81 VLVESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGINCT-PPR 159 (247)
Q Consensus 81 ~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~NC~-~p~ 159 (247)
.|+++|||+|++||++++.|++++++++++...++|+|+|||+.+++++++|+++++++..+.+ .++++||+||+ +|+
T Consensus 134 ~l~~~gvD~l~~ET~~~~~Ea~aa~~a~~~~~~~~Pv~vS~t~~~~g~~~~G~~~~~~~~~l~~-~~~~avG~NC~~gp~ 212 (566)
T 1q7z_A 134 IMVEEGVDGIIFETFSDILELKAAVLAAREVSRDVFLIAHMTFDEKGRSLTGTDPANFAITFDE-LDIDALGINCSLGPE 212 (566)
T ss_dssp HHHHTTCSEEEEEEECCHHHHHHHHHHHHHHCSSSCEEEEECCCTTSCCTTSCCHHHHHHHHHT-SSCSEEEEESSSCHH
T ss_pred HHHhCCCCEEEEeccCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCeeCCCCcHHHHHHHhhc-cCCCEEEEeCCCCHH
Confidence 9999999999999999999999999999985337999999999999999999999999999987 58999999996 899
Q ss_pred HHHHHHHHHHhhcCCCEEEEeCCCCcc--cccccccccCCCCChHHHHHHHHHHHHcCCeEEeecCCCChHHHHHHHHHh
Q 025860 160 FISGLILIIKKVTAKPILIYPNSGEFY--DADRKEWVQNTGVSDEDFVSYVSKWCEVGASLVGGCCRTTPNTIKGIYRTL 237 (247)
Q Consensus 160 ~~~~~l~~l~~~~~~pl~vyPNaG~~~--d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~iIGGCCGt~P~hI~al~~~l 237 (247)
.|.++|+.+....+.|+++|||+|.++ +.. ..|. .+|++|++++++|++.|++||||||||||+||++|++.+
T Consensus 213 ~~~~~l~~l~~~~~~p~~vyPNaG~p~~~~~~-~~~~----~~p~~~a~~~~~~~~~G~~iiGGCCGTtP~hI~aia~~~ 287 (566)
T 1q7z_A 213 EILPIFQELSQYTDKFLVVEPNAGKPIVENGK-TVYP----LKPHDFAVHIDSYYELGVNIFGGCCGTTPEHVKLFRKVL 287 (566)
T ss_dssp HHHHHHHHHHHTCCSEEEEECCSSSCEEETTE-EECC----CCHHHHHTTHHHHHHTTCSEECCCTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCEEEEEcCCCCCcccCCc-cccC----CCHHHHHHHHHHHHHcCCcEEccccCCCHHHHHHHHHHh
Confidence 999999999998999999999999876 432 3453 469999999999999999999999999999999999999
Q ss_pred hCCCCC
Q 025860 238 SNRSSV 243 (247)
Q Consensus 238 ~~~~~~ 243 (247)
++.+|.
T Consensus 288 ~~~~p~ 293 (566)
T 1q7z_A 288 GNRKPL 293 (566)
T ss_dssp CSCCCC
T ss_pred cCCCCC
Confidence 876654
No 2
>1lt8_A Betaine-homocysteine methyltransferase; homocysteine metabolism, homocysteinemia, zinc, thiol alkyl transfer; HET: CBH CIT; 2.05A {Homo sapiens} SCOP: c.1.26.1 PDB: 1lt7_A* 1umy_A
Probab=100.00 E-value=6.6e-51 Score=376.89 Aligned_cols=204 Identities=21% Similarity=0.307 Sum_probs=179.1
Q ss_pred CHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCCCCCeEEEEecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 025860 1 MLRRSVEIAREARDMYFERCSKSSCDSVTDDRIPKHRPILVAASVGSYGAYLADGSEYSGNYGDAITVETLKDFHRRRVQ 80 (247)
Q Consensus 1 l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~VaGsiGP~g~~l~~g~eY~g~y~~~~s~~e~~~~~~~q~~ 80 (247)
||++||+|||+|+++ .+++|||||||+|+++. .+++++++++|++|++
T Consensus 99 ln~~Av~LAreAa~~---------------------~~~~VAGsIGP~g~~l~-----------~~s~eel~~~~~eqi~ 146 (406)
T 1lt8_A 99 VNEAAADIARQVADE---------------------GDALVAGGVSQTPSYLS-----------AKSETEVKKVFLQQLE 146 (406)
T ss_dssp HHHHHHHHHHHHHTT---------------------TTCEEEEEECCCHHHHT-----------TCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhc---------------------CCCEEEEEcCCcccccC-----------CCCHHHHHHHHHHHHH
Confidence 589999999999864 14899999999997552 2689999999999999
Q ss_pred HHhcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEEcCC-Chh
Q 025860 81 VLVESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGINCT-PPR 159 (247)
Q Consensus 81 ~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~NC~-~p~ 159 (247)
+|+++|||+|+||||+++.|++++++++++. ++|||+||++.++++ ++|+++++++..+.+ .++++|||||+ +|+
T Consensus 147 ~L~~~GvDlll~ETi~~~~Eakaa~~a~~~~--~lPv~iS~T~~~~G~-l~G~~~~~~~~~l~~-~~~~avGvNC~~gP~ 222 (406)
T 1lt8_A 147 VFMKKNVDFLIAEYFEHVEEAVWAVETLIAS--GKPVAATMAIGPEGD-LHGVPPGEAAVRLVK-AGASIIGVNCHFDPT 222 (406)
T ss_dssp HHHHHTCSEEEECCCSCHHHHHHHHHHHGGG--TSCEEEEECCBTTBC-TTCCCHHHHHHHHHT-TTCSEEEEESSSCHH
T ss_pred HHhhCCCCEEEEcccCCHHHHHHHHHHHHHh--CCcEEEEEEECCCCC-cCCCcHHHHHHHhhc-CCCCEEEecCCCCHH
Confidence 9999999999999999999999999999986 599999999988888 899999999999987 57999999997 899
Q ss_pred HHHHHHHHHHhhc-----CCCEEEEeCCCCcccccccccccCC----CCChH-----HHHHHHHHHHHcCCeEEeecCCC
Q 025860 160 FISGLILIIKKVT-----AKPILIYPNSGEFYDADRKEWVQNT----GVSDE-----DFVSYVSKWCEVGASLVGGCCRT 225 (247)
Q Consensus 160 ~~~~~l~~l~~~~-----~~pl~vyPNaG~~~d~~~~~~~~~~----~~~~~-----~~~~~~~~~~~~G~~iIGGCCGt 225 (247)
.|.++|+.+++.. +.|+++|||+|..++..++.|.... ..+|+ +|.+++++|.+.|++||||||||
T Consensus 223 ~~~~~l~~l~~~~~~~g~~~pl~vyPNag~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~w~~~Ga~iIGGCCGT 302 (406)
T 1lt8_A 223 ISLKTVKLMKEGLEAAQLKAHLMSQPLAYHTPDANKQGFIDLPEFPFGLEPRVATRWDIQKYAREAYNLGVRYIGGCCGF 302 (406)
T ss_dssp HHHHHHHHHHHHHHTTTCCCEEEEECCSBCCTTCCTTCGGGSTTTTTSCGGGBCCHHHHHHHHHHHHHHTEEEECCCTTC
T ss_pred HHHHHHHHHHHhhhhcCCCccEEEecCCCCCCcCCcccccCCccccccCCHHHHHHHHHHHHHHHHHhCCCeEEEEecCC
Confidence 9999999998764 7899999999987775556675311 23454 59999999999999999999999
Q ss_pred ChHHHHHHHHHhhCC
Q 025860 226 TPNTIKGIYRTLSNR 240 (247)
Q Consensus 226 ~P~hI~al~~~l~~~ 240 (247)
||+||++|++.++..
T Consensus 303 tPeHI~aia~~l~~~ 317 (406)
T 1lt8_A 303 EPYHIRAIAEELAPE 317 (406)
T ss_dssp CHHHHHHHHHHTHHH
T ss_pred CHHHHHHHHHHHhcc
Confidence 999999999998643
No 3
>1lt8_A Betaine-homocysteine methyltransferase; homocysteine metabolism, homocysteinemia, zinc, thiol alkyl transfer; HET: CBH CIT; 2.05A {Homo sapiens} SCOP: c.1.26.1 PDB: 1lt7_A* 1umy_A
Probab=96.89 E-value=0.023 Score=52.17 Aligned_cols=155 Identities=15% Similarity=0.155 Sum_probs=99.7
Q ss_pred CHHHHHHHHHHHHHHHhcCCCCEEEEecCCC-----------------HHH-HHHHHHHHHhhCCCCcEEEEEEEcCCCc
Q 025860 67 TVETLKDFHRRRVQVLVESAPDLIAFETIPN-----------------KIE-AQAYAELLEEENIKIPAWFSFNSKDGVN 128 (247)
Q Consensus 67 s~~e~~~~~~~q~~~l~~~gvD~i~~ET~~~-----------------~~E-~~aa~~~~~~~~~~~pv~is~~~~~~~~ 128 (247)
.++.+++.|++-+ ++|+|+|.=-|+.. ..| .+.+++.+|+.....|++|.-++-+-+.
T Consensus 52 ~Pe~V~~iH~~Yl----~AGAdII~TNTf~A~~~~l~~~G~~~~~~~~~~eln~~Av~LAreAa~~~~~~VAGsIGP~g~ 127 (406)
T 1lt8_A 52 HPEAVRQLHREFL----RAGSNVMQTFTFYASEDKLENRGNYVLEKISGQEVNEAAADIARQVADEGDALVAGGVSQTPS 127 (406)
T ss_dssp CHHHHHHHHHHHH----HTTCSEEECSCTTCSSCC-------------CHHHHHHHHHHHHHHHTTTTCEEEEEECCCHH
T ss_pred CHHHHHHHHHHHH----HhCccceeccccccCHHHHHhcCCccchhHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCCccc
Confidence 4677788888765 49999874444321 112 3445666666422347788888866665
Q ss_pred ccCCCcHHHHHHH-------HHhCCCCeEEEEcCC-ChhHHHHHHHHHHhhcCCCEEEEeCCCCcccccccccccCCCCC
Q 025860 129 VVSGDSLLECASI-------AESCKRVVSVGINCT-PPRFISGLILIIKKVTAKPILIYPNSGEFYDADRKEWVQNTGVS 200 (247)
Q Consensus 129 l~~G~~~~~~~~~-------~~~~~~~~avG~NC~-~p~~~~~~l~~l~~~~~~pl~vyPNaG~~~d~~~~~~~~~~~~~ 200 (247)
.....+++++... +.+ .++|.|.+.-. +...+..+++.+++ .+.|+++.---. .++ + .. ..+
T Consensus 128 ~l~~~s~eel~~~~~eqi~~L~~-~GvDlll~ETi~~~~Eakaa~~a~~~-~~lPv~iS~T~~--~~G---~-l~--G~~ 197 (406)
T 1lt8_A 128 YLSAKSETEVKKVFLQQLEVFMK-KNVDFLIAEYFEHVEEAVWAVETLIA-SGKPVAATMAIG--PEG---D-LH--GVP 197 (406)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHH-HTCSEEEECCCSCHHHHHHHHHHHGG-GTSCEEEEECCB--TTB---C-TT--CCC
T ss_pred ccCCCCHHHHHHHHHHHHHHHhh-CCCCEEEEcccCCHHHHHHHHHHHHH-hCCcEEEEEEEC--CCC---C-cC--CCc
Confidence 5566777776543 333 58999999986 67777778777665 468977654332 111 1 21 134
Q ss_pred hHHHHHHHHHHHHcCCeEEeecCCCChHHHHHHHHHhh
Q 025860 201 DEDFVSYVSKWCEVGASLVGGCCRTTPNTIKGIYRTLS 238 (247)
Q Consensus 201 ~~~~~~~~~~~~~~G~~iIGGCCGt~P~hI~al~~~l~ 238 (247)
+++++. ...+.|+..||=-|.++|+++..+-+.+.
T Consensus 198 ~~~~~~---~l~~~~~~avGvNC~~gP~~~~~~l~~l~ 232 (406)
T 1lt8_A 198 PGEAAV---RLVKAGASIIGVNCHFDPTISLKTVKLMK 232 (406)
T ss_dssp HHHHHH---HHHTTTCSEEEEESSSCHHHHHHHHHHHH
T ss_pred HHHHHH---HhhcCCCCEEEecCCCCHHHHHHHHHHHH
Confidence 554444 44557899999999999998887666554
No 4
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=96.55 E-value=0.14 Score=45.49 Aligned_cols=137 Identities=17% Similarity=0.204 Sum_probs=87.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCCEEEEecCC-C--------------H---HHHHHHHHHHHhhCCCCcEEEEEEEcC----
Q 025860 68 VETLKDFHRRRVQVLVESAPDLIAFETIP-N--------------K---IEAQAYAELLEEENIKIPAWFSFNSKD---- 125 (247)
Q Consensus 68 ~~e~~~~~~~q~~~l~~~gvD~i~~ET~~-~--------------~---~E~~aa~~~~~~~~~~~pv~is~~~~~---- 125 (247)
.+...++|+++++ .|+.+|+.|... + - ...+.+.+++++. +.++++++.=..
T Consensus 38 ~~~~~~~y~~rA~----gG~gliite~~~v~~~g~~~~~~~~i~~d~~~~~~~~~~~~vh~~--g~~i~~QL~h~Gr~~~ 111 (338)
T 1z41_A 38 TPFHMAHYISRAI----GQVGLIIVEASAVNPQGRITDQDLGIWSDEHIEGFAKLTEQVKEQ--GSKIGIQLAHAGRKAE 111 (338)
T ss_dssp CHHHHHHHHHHHH----TTCSEEEEEEEESSGGGCSSTTSCBCSSTHHHHHHHHHHHHHHHT--TCEEEEEEECCGGGCC
T ss_pred CHHHHHHHHHHHc----CCCCEEEeCCeeccccccCCCCCcccCCHHHHHHHHHHHHHHHhc--CCEEEEEecCCCcccC
Confidence 3778888988874 789999999642 1 1 1245556666765 468888885210
Q ss_pred ------------------CCcccCC-------CcHHHHHHHHHhCCCCeEEEEcCCC---------h-------------
Q 025860 126 ------------------GVNVVSG-------DSLLECASIAESCKRVVSVGINCTP---------P------------- 158 (247)
Q Consensus 126 ------------------~~~l~~G-------~~~~~~~~~~~~~~~~~avG~NC~~---------p------------- 158 (247)
..+-.+- +.+.++++.+.+ .|.|+|=|||.+ |
T Consensus 112 ~~~~~~~pS~~~~~~~~~~p~~mt~~eI~~~i~~~~~aA~~a~~-aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGsl 190 (338)
T 1z41_A 112 LEGDIFAPSAIAFDEQSATPVEMSAEKVKETVQEFKQAAARAKE-AGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSP 190 (338)
T ss_dssp CSSCCEESSSCCSSTTSCCCEECCHHHHHHHHHHHHHHHHHHHH-TTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSH
T ss_pred CCCCCcCCCCCCCCCCCCCCccCCHHHHHHHHHHHHHHHHHHHH-cCCCEEEeccccchHHHHccCCCcCCcCcccCcch
Confidence 0000000 123455555555 589999999863 2
Q ss_pred ----hHHHHHHHHHHhhcCCCEEEEeCCCCcccccccccccCCCCChHHHHHHHHHHHHcCCeEEe
Q 025860 159 ----RFISGLILIIKKVTAKPILIYPNSGEFYDADRKEWVQNTGVSDEDFVSYVSKWCEVGASLVG 220 (247)
Q Consensus 159 ----~~~~~~l~~l~~~~~~pl~vyPNaG~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~iIG 220 (247)
..+.++++.+++..+.||++.-+.....+. . .+.+++.+.++.+.+.|+.+|-
T Consensus 191 enr~r~~~eiv~avr~~v~~pv~vris~~~~~~~---g------~~~~~~~~~a~~l~~~Gvd~i~ 247 (338)
T 1z41_A 191 ENRYRFLREIIDEVKQVWDGPLFVRVSASDYTDK---G------LDIADHIGFAKWMKEQGVDLID 247 (338)
T ss_dssp HHHHHHHHHHHHHHHHHCCSCEEEEEECCCCSTT---S------CCHHHHHHHHHHHHHTTCCEEE
T ss_pred hhhHHHHHHHHHHHHHHcCCcEEEEecCcccCCC---C------CCHHHHHHHHHHHHHcCCCEEE
Confidence 235677778887778999998776432111 1 3466777888888888877654
No 5
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=96.51 E-value=0.13 Score=44.91 Aligned_cols=144 Identities=15% Similarity=0.166 Sum_probs=91.5
Q ss_pred CCHHHHHHHHHHHHHHHhcCCCCEEEE-----ec-CCCHHHHHHHHHHHHh-hCCCCcEEEEEEEcCCCcccCCCcHHHH
Q 025860 66 ITVETLKDFHRRRVQVLVESAPDLIAF-----ET-IPNKIEAQAYAELLEE-ENIKIPAWFSFNSKDGVNVVSGDSLLEC 138 (247)
Q Consensus 66 ~s~~e~~~~~~~q~~~l~~~gvD~i~~-----ET-~~~~~E~~aa~~~~~~-~~~~~pv~is~~~~~~~~l~~G~~~~~~ 138 (247)
++.+.+++ +++.+++.|||.|++ |. .-+.+|=+.+++.+.+ .+.+.||++.. .+.+..++
T Consensus 18 iD~~~l~~----lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv---------g~~~t~~a 84 (294)
T 2ehh_A 18 VDYEALGN----LIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAGRIKVIAGT---------GGNATHEA 84 (294)
T ss_dssp ECHHHHHH----HHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEC---------CCSCHHHH
T ss_pred cCHHHHHH----HHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEec---------CCCCHHHH
Confidence 56655544 888888999999876 43 2346677777776665 33368999776 34466766
Q ss_pred HHHHHh--CCCCeEEEEcCC-----ChhHHHHHHHHHHhhcCCCEEEEeCCCCcccccccccccCCCCChHHHHHHHHHH
Q 025860 139 ASIAES--CKRVVSVGINCT-----PPRFISGLILIIKKVTAKPILIYPNSGEFYDADRKEWVQNTGVSDEDFVSYVSKW 211 (247)
Q Consensus 139 ~~~~~~--~~~~~avG~NC~-----~p~~~~~~l~~l~~~~~~pl~vyPNaG~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 211 (247)
++..+. ..|++++.+-.- +.+.+..-.+.+.+..+.|+++|=+-+.. ...++++.+.+.+++.
T Consensus 85 i~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~t----------g~~l~~~~~~~La~~~ 154 (294)
T 2ehh_A 85 VHLTAHAKEVGADGALVVVPYYNKPTQRGLYEHFKTVAQEVDIPIIIYNIPSRT----------CVEISVDTMFKLASEC 154 (294)
T ss_dssp HHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCCSCEEEEECHHHH----------SCCCCHHHHHHHHHHC
T ss_pred HHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccc----------CcCCCHHHHHHHHhhC
Confidence 665432 268999888652 34667777778888889999999876421 1124566666654322
Q ss_pred HHcCCeEEee--cCCCChHHHHHHHHHh
Q 025860 212 CEVGASLVGG--CCRTTPNTIKGIYRTL 237 (247)
Q Consensus 212 ~~~G~~iIGG--CCGt~P~hI~al~~~l 237 (247)
.+|+|= ++| ...++..+.+..
T Consensus 155 ----pnivgiKds~g-d~~~~~~~~~~~ 177 (294)
T 2ehh_A 155 ----ENIVASKESTP-NMDRISEIVKRL 177 (294)
T ss_dssp ----TTEEEEEECCS-CHHHHHHHHHHH
T ss_pred ----CCEEEEEeCCC-CHHHHHHHHHhc
Confidence 456652 333 356666665544
No 6
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=96.46 E-value=0.055 Score=47.88 Aligned_cols=104 Identities=18% Similarity=0.149 Sum_probs=72.8
Q ss_pred CCHHHHHHHHHHHHHHHhcCCCCEEEE-------ecCCCHHHHHHHHHHHHh-hCCCCcEEEEEEEcCCCcccCCCcHHH
Q 025860 66 ITVETLKDFHRRRVQVLVESAPDLIAF-------ETIPNKIEAQAYAELLEE-ENIKIPAWFSFNSKDGVNVVSGDSLLE 137 (247)
Q Consensus 66 ~s~~e~~~~~~~q~~~l~~~gvD~i~~-------ET~~~~~E~~aa~~~~~~-~~~~~pv~is~~~~~~~~l~~G~~~~~ 137 (247)
++.+.+++ +++.+++.|||.|++ =|+ +.+|-+.+++.+.+ .+.++||++.. .+.+..+
T Consensus 40 iD~~~l~~----li~~li~~Gv~Gl~v~GtTGE~~~L-s~~Er~~v~~~~v~~~~grvpViaGv---------g~~st~~ 105 (315)
T 3si9_A 40 IDEKAFCN----FVEWQITQGINGVSPVGTTGESPTL-THEEHKRIIELCVEQVAKRVPVVAGA---------GSNSTSE 105 (315)
T ss_dssp BCHHHHHH----HHHHHHHTTCSEEECSSTTTTGGGS-CHHHHHHHHHHHHHHHTTSSCBEEEC---------CCSSHHH
T ss_pred cCHHHHHH----HHHHHHHcCCCEEEeCccccCcccc-CHHHHHHHHHHHHHHhCCCCcEEEeC---------CCCCHHH
Confidence 67666555 777888899999873 222 46777777877655 33368999877 3456677
Q ss_pred HHHHHHh--CCCCeEEEEcC-----CChhHHHHHHHHHHhhcCCCEEEEeCCC
Q 025860 138 CASIAES--CKRVVSVGINC-----TPPRFISGLILIIKKVTAKPILIYPNSG 183 (247)
Q Consensus 138 ~~~~~~~--~~~~~avG~NC-----~~p~~~~~~l~~l~~~~~~pl~vyPNaG 183 (247)
+++..+. ..|++++.+-. .+.+.+..-.+.+.+..+.|+++|=+-+
T Consensus 106 ai~la~~A~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~lPiilYn~P~ 158 (315)
T 3si9_A 106 AVELAKHAEKAGADAVLVVTPYYNRPNQRGLYTHFSSIAKAISIPIIIYNIPS 158 (315)
T ss_dssp HHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHH
T ss_pred HHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHcCCCCEEEEeCch
Confidence 6665432 25889888765 2346677777888888899999997654
No 7
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=96.22 E-value=0.073 Score=46.79 Aligned_cols=105 Identities=14% Similarity=0.144 Sum_probs=73.3
Q ss_pred CCHHHHHHHHHHHHHHHhcCCCCEEEE-----ec-CCCHHHHHHHHHHHHh-hCCCCcEEEEEEEcCCCcccCCCcHHHH
Q 025860 66 ITVETLKDFHRRRVQVLVESAPDLIAF-----ET-IPNKIEAQAYAELLEE-ENIKIPAWFSFNSKDGVNVVSGDSLLEC 138 (247)
Q Consensus 66 ~s~~e~~~~~~~q~~~l~~~gvD~i~~-----ET-~~~~~E~~aa~~~~~~-~~~~~pv~is~~~~~~~~l~~G~~~~~~ 138 (247)
++.+.+++ +++.+++.|||.|++ |. .-+.+|=+.+++.+.+ .+.+.||++.. .+.+..++
T Consensus 34 iD~~~l~~----lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv---------g~~st~~a 100 (304)
T 3cpr_A 34 IDIAAGRE----VAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLIAGV---------GTNNTRTS 100 (304)
T ss_dssp BCHHHHHH----HHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEEEC---------CCSCHHHH
T ss_pred cCHHHHHH----HHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEecC---------CCCCHHHH
Confidence 67665555 778888899999876 53 2356677777776655 33368999776 34566777
Q ss_pred HHHHHh--CCCCeEEEEcCC-----ChhHHHHHHHHHHhhcCCCEEEEeCCC
Q 025860 139 ASIAES--CKRVVSVGINCT-----PPRFISGLILIIKKVTAKPILIYPNSG 183 (247)
Q Consensus 139 ~~~~~~--~~~~~avG~NC~-----~p~~~~~~l~~l~~~~~~pl~vyPNaG 183 (247)
++..+. ..|++++.+-.- +.+.+..-.+.+.+..+.|+++|=+-+
T Consensus 101 i~la~~A~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~~lPiilYn~P~ 152 (304)
T 3cpr_A 101 VELAEAAASAGADGLLVVTPYYSKPSQEGLLAHFGAIAAATEVPICLYDIPG 152 (304)
T ss_dssp HHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCCSCEEEEECHH
T ss_pred HHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCcc
Confidence 665532 268998887552 346677777788888899999998754
No 8
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=96.18 E-value=0.26 Score=47.07 Aligned_cols=156 Identities=14% Similarity=0.122 Sum_probs=100.6
Q ss_pred CHHHHHHHHHHHHHHHhcCCCCEEEEecCCCHH-------------H-HHHHHHHHHhhCCCCcEEEEEEEcCCCccc--
Q 025860 67 TVETLKDFHRRRVQVLVESAPDLIAFETIPNKI-------------E-AQAYAELLEEENIKIPAWFSFNSKDGVNVV-- 130 (247)
Q Consensus 67 s~~e~~~~~~~q~~~l~~~gvD~i~~ET~~~~~-------------E-~~aa~~~~~~~~~~~pv~is~~~~~~~~l~-- 130 (247)
.++.+++.|++-+ ++|+|+|.--|+..-. | .+.+++.+|+.. +.+ +|.-++-+-+...
T Consensus 42 ~Pe~V~~iH~~Yl----~AGAdii~TnTf~a~~~~l~~~g~~~~~~el~~~av~lAr~a~-~~~-~VAGsiGP~g~~~~~ 115 (566)
T 1q7z_A 42 APDVVLKVHRSYI----ESGSDVILTNTFGATRMKLRKHGLEDKLDPIVRNAVRIARRAA-GEK-LVFGDIGPTGELPYP 115 (566)
T ss_dssp CHHHHHHHHHHHH----HHTCSEEECSCTTCSHHHHGGGTCGGGHHHHHHHHHHHHHHHH-TTS-EEEEEECCCSCCBTT
T ss_pred CHHHHHHHHHHHH----HhhcceeecCcccCCHHHHHhcCchHHHHHHHHHHHHHHHHHH-hCC-eEEEeCCCcccCCCC
Confidence 5688888888765 4899987555544222 1 234556666653 224 7777776655432
Q ss_pred -CCCcHHHHHHHH-------HhCCCCeEEEEcCC-ChhHHHHHHHHHHhh-cCCCEEEEeCCCCcccccccccccCCCCC
Q 025860 131 -SGDSLLECASIA-------ESCKRVVSVGINCT-PPRFISGLILIIKKV-TAKPILIYPNSGEFYDADRKEWVQNTGVS 200 (247)
Q Consensus 131 -~G~~~~~~~~~~-------~~~~~~~avG~NC~-~p~~~~~~l~~l~~~-~~~pl~vyPNaG~~~d~~~~~~~~~~~~~ 200 (247)
.+.+++++.+.. .+ .++|.+.+.-. +...+..++..+++. .+.|+++.=.... ++ +... ..+
T Consensus 116 ~~~~~~~e~~~~~~~qi~~l~~-~gvD~l~~ET~~~~~Ea~aa~~a~~~~~~~~Pv~vS~t~~~--~g---~~~~--G~~ 187 (566)
T 1q7z_A 116 LGSTLFEEFYENFRETVEIMVE-EGVDGIIFETFSDILELKAAVLAAREVSRDVFLIAHMTFDE--KG---RSLT--GTD 187 (566)
T ss_dssp TSSBCHHHHHHHHHHHHHHHHH-TTCSEEEEEEECCHHHHHHHHHHHHHHCSSSCEEEEECCCT--TS---CCTT--SCC
T ss_pred CCCCCHHHHHHHHHHHHHHHHh-CCCCEEEEeccCCHHHHHHHHHHHHHhCCCCcEEEEEEEcC--CC---eeCC--CCc
Confidence 225676654433 34 68999999975 778888888888765 5899876554311 11 1111 134
Q ss_pred hHHHHHHHHHHHHcCCeEEeecCCCChHHHHHHHHHhhC
Q 025860 201 DEDFVSYVSKWCEVGASLVGGCCRTTPNTIKGIYRTLSN 239 (247)
Q Consensus 201 ~~~~~~~~~~~~~~G~~iIGGCCGt~P~hI~al~~~l~~ 239 (247)
.+++... ....|+..||=-|+++|+|+..+-+.+..
T Consensus 188 ~~~~~~~---l~~~~~~avG~NC~~gp~~~~~~l~~l~~ 223 (566)
T 1q7z_A 188 PANFAIT---FDELDIDALGINCSLGPEEILPIFQELSQ 223 (566)
T ss_dssp HHHHHHH---HHTSSCSEEEEESSSCHHHHHHHHHHHHH
T ss_pred HHHHHHH---hhccCCCEEEEeCCCCHHHHHHHHHHHHh
Confidence 5555544 44579999999999999999988777653
No 9
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=96.15 E-value=0.19 Score=44.40 Aligned_cols=105 Identities=12% Similarity=0.115 Sum_probs=72.0
Q ss_pred CCHHHHHHHHHHHHHHHhcCCCCEEEE-----ecC-CCHHHHHHHHHHHHhh-CCCCcEEEEEEEcCCCcccCCCcHHHH
Q 025860 66 ITVETLKDFHRRRVQVLVESAPDLIAF-----ETI-PNKIEAQAYAELLEEE-NIKIPAWFSFNSKDGVNVVSGDSLLEC 138 (247)
Q Consensus 66 ~s~~e~~~~~~~q~~~l~~~gvD~i~~-----ET~-~~~~E~~aa~~~~~~~-~~~~pv~is~~~~~~~~l~~G~~~~~~ 138 (247)
++.+.+++ +++.+++.|||.|++ |.. -+.+|=+.+++.+.+. +.++||++.. .+.+..++
T Consensus 29 iD~~~l~~----lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv---------g~~~t~~a 95 (318)
T 3qfe_A 29 LDLASQER----YYAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVGPDFPIMAGV---------GAHSTRQV 95 (318)
T ss_dssp ECHHHHHH----HHHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHCTTSCEEEEC---------CCSSHHHH
T ss_pred CCHHHHHH----HHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC---------CCCCHHHH
Confidence 56655544 788888999998765 311 2467777788776553 4468999876 34566776
Q ss_pred HHHHHh--CCCCeEEEEcCC-------ChhHHHHHHHHHHhhcCCCEEEEeCCC
Q 025860 139 ASIAES--CKRVVSVGINCT-------PPRFISGLILIIKKVTAKPILIYPNSG 183 (247)
Q Consensus 139 ~~~~~~--~~~~~avG~NC~-------~p~~~~~~l~~l~~~~~~pl~vyPNaG 183 (247)
++..+. ..|++++.+-.- +.+.+..-.+.+.+..+.|+++|=+-+
T Consensus 96 i~la~~a~~~Gadavlv~~P~y~~kp~~~~~l~~~f~~ia~a~~lPiilYn~P~ 149 (318)
T 3qfe_A 96 LEHINDASVAGANYVLVLPPAYFGKATTPPVIKSFFDDVSCQSPLPVVIYNFPG 149 (318)
T ss_dssp HHHHHHHHHHTCSEEEECCCCC---CCCHHHHHHHHHHHHHHCSSCEEEEECCC
T ss_pred HHHHHHHHHcCCCEEEEeCCcccCCCCCHHHHHHHHHHHHhhCCCCEEEEeCCc
Confidence 665532 258898887553 135566677777778899999998765
No 10
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=96.07 E-value=0.45 Score=41.77 Aligned_cols=144 Identities=15% Similarity=0.126 Sum_probs=90.1
Q ss_pred CCHHHHHHHHHHHHHHHhcCCCCEEEE-----ec-CCCHHHHHHHHHHHHhh-CCCCcEEEEEEEcCCCcccCCCcHHHH
Q 025860 66 ITVETLKDFHRRRVQVLVESAPDLIAF-----ET-IPNKIEAQAYAELLEEE-NIKIPAWFSFNSKDGVNVVSGDSLLEC 138 (247)
Q Consensus 66 ~s~~e~~~~~~~q~~~l~~~gvD~i~~-----ET-~~~~~E~~aa~~~~~~~-~~~~pv~is~~~~~~~~l~~G~~~~~~ 138 (247)
++.+.+++ +++.+++.|||.|++ |. .-+.+|=+.+++.+.+. +.++||++.. .+.+..++
T Consensus 26 iD~~~l~~----lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv---------g~~~t~~a 92 (309)
T 3fkr_A 26 LDLASQKR----AVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAGRVPVIVTT---------SHYSTQVC 92 (309)
T ss_dssp BCHHHHHH----HHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC---------CCSSHHHH
T ss_pred cCHHHHHH----HHHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEec---------CCchHHHH
Confidence 66665555 777888899998776 31 12467777788776553 3368999887 34456666
Q ss_pred HHHHHh--CCCCeEEEEcC--------CChhHHHHHHHHHHhhcCCCEEEEeCCCCcccccccccccCCCCChHHHHHHH
Q 025860 139 ASIAES--CKRVVSVGINC--------TPPRFISGLILIIKKVTAKPILIYPNSGEFYDADRKEWVQNTGVSDEDFVSYV 208 (247)
Q Consensus 139 ~~~~~~--~~~~~avG~NC--------~~p~~~~~~l~~l~~~~~~pl~vyPNaG~~~d~~~~~~~~~~~~~~~~~~~~~ 208 (247)
++..+. ..|++++.+-. .+.+.+..-.+.+.+..+.|+++|=+-+. ...++++.+.+.+
T Consensus 93 i~la~~A~~~Gadavlv~~Pyy~~~~~~s~~~l~~~f~~va~a~~lPiilYn~P~t-----------g~~l~~~~~~~La 161 (309)
T 3fkr_A 93 AARSLRAQQLGAAMVMAMPPYHGATFRVPEAQIFEFYARVSDAIAIPIMVQDAPAS-----------GTALSAPFLARMA 161 (309)
T ss_dssp HHHHHHHHHTTCSEEEECCSCBTTTBCCCHHHHHHHHHHHHHHCSSCEEEEECGGG-----------CCCCCHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEcCCCCccCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCC-----------CCCCCHHHHHHHH
Confidence 665432 25899988853 23466777778888888999999976421 1114566555544
Q ss_pred HHHHHcCCeEEeec--CCCChHHHHHHHHHh
Q 025860 209 SKWCEVGASLVGGC--CRTTPNTIKGIYRTL 237 (247)
Q Consensus 209 ~~~~~~G~~iIGGC--CGt~P~hI~al~~~l 237 (247)
++ -.+|+|== |+...++++.+.+..
T Consensus 162 ~~----~pnIvgiK~~~~~~~~~~~~~~~~~ 188 (309)
T 3fkr_A 162 RE----IEQVAYFXIETPGAANKLRELIRLG 188 (309)
T ss_dssp HH----STTEEEEEECSSSHHHHHHHHHHHH
T ss_pred hh----CCCEEEEECCCcchHHHHHHHHHhc
Confidence 33 24666621 222345666665543
No 11
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=96.02 E-value=0.091 Score=45.82 Aligned_cols=105 Identities=16% Similarity=0.132 Sum_probs=73.8
Q ss_pred CCHHHHHHHHHHHHHHHhcCCCCEEEE-----ec-CCCHHHHHHHHHHHHhh-CCCCcEEEEEEEcCCCcccCCCcHHHH
Q 025860 66 ITVETLKDFHRRRVQVLVESAPDLIAF-----ET-IPNKIEAQAYAELLEEE-NIKIPAWFSFNSKDGVNVVSGDSLLEC 138 (247)
Q Consensus 66 ~s~~e~~~~~~~q~~~l~~~gvD~i~~-----ET-~~~~~E~~aa~~~~~~~-~~~~pv~is~~~~~~~~l~~G~~~~~~ 138 (247)
++.+.+++ +++.+++.|||.|++ |. .-+.+|-+.+++.+.+. +.+.||++.. .+.+..++
T Consensus 19 iD~~~l~~----lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv---------g~~~t~~a 85 (292)
T 2ojp_A 19 VCRASLKK----LIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVIAGT---------GANATAEA 85 (292)
T ss_dssp BCHHHHHH----HHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC---------CCSSHHHH
T ss_pred cCHHHHHH----HHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCcEEEec---------CCccHHHH
Confidence 67666555 777778899999876 43 23566777788776553 3368999777 34566777
Q ss_pred HHHHHh--CCCCeEEEEcCC-----ChhHHHHHHHHHHhhcCCCEEEEeCCC
Q 025860 139 ASIAES--CKRVVSVGINCT-----PPRFISGLILIIKKVTAKPILIYPNSG 183 (247)
Q Consensus 139 ~~~~~~--~~~~~avG~NC~-----~p~~~~~~l~~l~~~~~~pl~vyPNaG 183 (247)
++..+. ..|++++.+-.- +.+.+..-.+.+.+..+.|+++|=+-+
T Consensus 86 i~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~lPiilYn~P~ 137 (292)
T 2ojp_A 86 ISLTQRFNDSGIVGCLTVTPYYNRPSQEGLYQHFKAIAEHTDLPQILYNVPS 137 (292)
T ss_dssp HHHHHHTTTSSCSEEEEECCCSSCCCHHHHHHHHHHHHTTCSSCEEEECCHH
T ss_pred HHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCcc
Confidence 776543 358898888652 346677777788877899999998743
No 12
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=96.01 E-value=0.081 Score=46.16 Aligned_cols=105 Identities=20% Similarity=0.173 Sum_probs=73.3
Q ss_pred CCHHHHHHHHHHHHHHHhcCCCCEEEE-----ec-CCCHHHHHHHHHHHHhh-CCCCcEEEEEEEcCCCcccCCCcHHHH
Q 025860 66 ITVETLKDFHRRRVQVLVESAPDLIAF-----ET-IPNKIEAQAYAELLEEE-NIKIPAWFSFNSKDGVNVVSGDSLLEC 138 (247)
Q Consensus 66 ~s~~e~~~~~~~q~~~l~~~gvD~i~~-----ET-~~~~~E~~aa~~~~~~~-~~~~pv~is~~~~~~~~l~~G~~~~~~ 138 (247)
++.+.+++ +++.+++.|||.|++ |. .-+.+|-+.+++.+.+. +.+.||++.. .+.+..++
T Consensus 18 iD~~~l~~----lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv---------g~~~t~~a 84 (292)
T 2vc6_A 18 IDEVALHD----LVEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANGRVPVIAGA---------GSNSTAEA 84 (292)
T ss_dssp ECHHHHHH----HHHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEEC---------CCSSHHHH
T ss_pred cCHHHHHH----HHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEec---------CCccHHHH
Confidence 56655554 777788899999875 42 23566777778776653 3368999877 34455666
Q ss_pred HHHHHh--CCCCeEEEEcCC-----ChhHHHHHHHHHHhhcCCCEEEEeCCC
Q 025860 139 ASIAES--CKRVVSVGINCT-----PPRFISGLILIIKKVTAKPILIYPNSG 183 (247)
Q Consensus 139 ~~~~~~--~~~~~avG~NC~-----~p~~~~~~l~~l~~~~~~pl~vyPNaG 183 (247)
++..+. ..|++++.+..- +.+.+..-.+.+.+..+.|+++|=+-+
T Consensus 85 i~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~lPiilYn~P~ 136 (292)
T 2vc6_A 85 IAFVRHAQNAGADGVLIVSPYYNKPTQEGIYQHFKAIDAASTIPIIVYNIPG 136 (292)
T ss_dssp HHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHH
T ss_pred HHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCcc
Confidence 655432 268999988773 346677777788888899999998753
No 13
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=95.97 E-value=0.22 Score=44.00 Aligned_cols=122 Identities=16% Similarity=0.162 Sum_probs=73.1
Q ss_pred HhcCCCCEEEEecCCCH---------------------------HHHHHHHHHHHhhCCCCcEEEEEEEcCCCccc-CCC
Q 025860 82 LVESAPDLIAFETIPNK---------------------------IEAQAYAELLEEENIKIPAWFSFNSKDGVNVV-SGD 133 (247)
Q Consensus 82 l~~~gvD~i~~ET~~~~---------------------------~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~-~G~ 133 (247)
+.+.|+.++..||++-- ...+..++.+++...+.|+.+++.-....... .=+
T Consensus 74 ~a~~G~g~i~~~~~~~~~~~g~~~pr~~~~~~d~~~in~~g~~~~g~~~~~~~~~~~~~~~~~~v~i~~~~~~~i~~~~~ 153 (336)
T 1f76_A 74 LGAMGFGSIEIGTVTPRPQPGNDKPRLFRLVDAEGLINRMGFNNLGVDNLVENVKKAHYDGVLGINIGKNKDTPVEQGKD 153 (336)
T ss_dssp HHHTTCSEEEEEEECSSCBCCSCSCCEEEETTTTEEEECCCCCBCCHHHHHHHHHHCCCCSEEEEEECCCTTSCGGGTHH
T ss_pred HHHcCccEEEeCCCCCCCCCCCCCcceeeccccceeeecCCCCCcCHHHHHHHHHhcccCCcEEEEecCCCCCcccccHH
Confidence 44689999988887521 11344455555543346888887432211100 012
Q ss_pred cHHHHHHHHHhCCCCeEEEEcCCCh-----------hHHHHHHHHHHhhc---------CCCEEEEeCCCCccccccccc
Q 025860 134 SLLECASIAESCKRVVSVGINCTPP-----------RFISGLILIIKKVT---------AKPILIYPNSGEFYDADRKEW 193 (247)
Q Consensus 134 ~~~~~~~~~~~~~~~~avG~NC~~p-----------~~~~~~l~~l~~~~---------~~pl~vyPNaG~~~d~~~~~~ 193 (247)
.+.++++.+.. ++++|=+|+++| +.+.++++.+++.. +.||++.-+.+ |
T Consensus 154 ~~~~aa~~~~~--g~d~iein~~sP~~~g~~~~~~~~~~~~il~~vr~~~~~~~~~~g~~~Pv~vKi~~~---------~ 222 (336)
T 1f76_A 154 DYLICMEKIYA--YAGYIAINISSPNTPGLRTLQYGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKIAPD---------L 222 (336)
T ss_dssp HHHHHHHHHGG--GCSEEEEECCCSSSTTGGGGGSHHHHHHHHHHHHHHHHHHHHHHTSCCCEEEECCSC---------C
T ss_pred HHHHHHHHHhc--cCCEEEEEccCCCCCCcccccCHHHHHHHHHHHHHHHHhhhhcccccCceEEEecCC---------C
Confidence 33444544432 689999998654 23456777777665 78999875432 2
Q ss_pred ccCCCCChHHHHHHHHHHHHcCCeEEe
Q 025860 194 VQNTGVSDEDFVSYVSKWCEVGASLVG 220 (247)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~G~~iIG 220 (247)
+.++..+.++...+.|+..|=
T Consensus 223 ------~~~~~~~~a~~l~~~Gvd~i~ 243 (336)
T 1f76_A 223 ------SEEELIQVADSLVRHNIDGVI 243 (336)
T ss_dssp ------CHHHHHHHHHHHHHTTCSEEE
T ss_pred ------CHHHHHHHHHHHHHcCCcEEE
Confidence 345677888888888987653
No 14
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=95.95 E-value=0.085 Score=46.40 Aligned_cols=105 Identities=16% Similarity=0.123 Sum_probs=72.8
Q ss_pred CCHHHHHHHHHHHHHHHhcCCCCEEEE-----ec-CCCHHHHHHHHHHHHhh-CCCCcEEEEEEEcCCCcccCCCcHHHH
Q 025860 66 ITVETLKDFHRRRVQVLVESAPDLIAF-----ET-IPNKIEAQAYAELLEEE-NIKIPAWFSFNSKDGVNVVSGDSLLEC 138 (247)
Q Consensus 66 ~s~~e~~~~~~~q~~~l~~~gvD~i~~-----ET-~~~~~E~~aa~~~~~~~-~~~~pv~is~~~~~~~~l~~G~~~~~~ 138 (247)
++.+.+++ .++.+++.|||.|++ |. .-+.+|-+.+++.+.+. +.+.||++.. .+.+..++
T Consensus 30 iD~~~l~~----lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGv---------g~~st~~a 96 (306)
T 1o5k_A 30 LDLESYER----LVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVIVGA---------GTNSTEKT 96 (306)
T ss_dssp ECHHHHHH----HHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEEC---------CCSCHHHH
T ss_pred cCHHHHHH----HHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcC---------CCccHHHH
Confidence 56655554 778888899999876 43 23566777788776653 3368999877 34466766
Q ss_pred HHHHHh--CCCCeEEEEcCC-----ChhHHHHHHHHHHhhcCCCEEEEeCCC
Q 025860 139 ASIAES--CKRVVSVGINCT-----PPRFISGLILIIKKVTAKPILIYPNSG 183 (247)
Q Consensus 139 ~~~~~~--~~~~~avG~NC~-----~p~~~~~~l~~l~~~~~~pl~vyPNaG 183 (247)
++..+. ..|++++.+-.- +.+.+..-.+.+.+..+.|+++|=+-+
T Consensus 97 i~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~ 148 (306)
T 1o5k_A 97 LKLVKQAEKLGANGVLVVTPYYNKPTQEGLYQHYKYISERTDLGIVVYNVPG 148 (306)
T ss_dssp HHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHTTCSSCEEEEECHH
T ss_pred HHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCcc
Confidence 665432 258898888652 346677777788877899999998754
No 15
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=95.93 E-value=0.79 Score=40.23 Aligned_cols=162 Identities=12% Similarity=0.006 Sum_probs=99.4
Q ss_pred CeEEEEecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCEEEE-----ec-CCCHHHHHHHHHHHHhh
Q 025860 38 PILVAASVGSYGAYLADGSEYSGNYGDAITVETLKDFHRRRVQVLVESAPDLIAF-----ET-IPNKIEAQAYAELLEEE 111 (247)
Q Consensus 38 ~~~VaGsiGP~g~~l~~g~eY~g~y~~~~s~~e~~~~~~~q~~~l~~~gvD~i~~-----ET-~~~~~E~~aa~~~~~~~ 111 (247)
+-.+..-+-|+.. + ..++.+.+++ +++.+++.|||.|++ |. .-+.+|=+.+++.+.+.
T Consensus 10 ~Gv~~a~vTPf~~----------d--g~iD~~~l~~----lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~ 73 (313)
T 3dz1_A 10 AGTFAIAPTPFHD----------D--GKIDDVSIDR----LTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKR 73 (313)
T ss_dssp CEEEEECCCCBCT----------T--SCBCHHHHHH----HHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHH
T ss_pred CeEEEEeeCCCCC----------C--CCcCHHHHHH----HHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHH
Confidence 4456666777742 1 1267665555 788888899998876 31 12467777788776554
Q ss_pred CCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHh--CCCCeEEEEcCC----ChhHHHHHHHHHHhhcC--CCEEEEeCCC
Q 025860 112 NIKIPAWFSFNSKDGVNVVSGDSLLECASIAES--CKRVVSVGINCT----PPRFISGLILIIKKVTA--KPILIYPNSG 183 (247)
Q Consensus 112 ~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~--~~~~~avG~NC~----~p~~~~~~l~~l~~~~~--~pl~vyPNaG 183 (247)
..++||++.. .+.+..++++..+. ..|++++.+-.- ..+.+..-.+.+.+..+ .|+++|=+-+
T Consensus 74 ~grvpViaGv---------g~~~t~~ai~la~~A~~~Gadavlv~~P~~~~s~~~l~~~f~~va~a~~~~lPiilYn~P~ 144 (313)
T 3dz1_A 74 AKSMQVIVGV---------SAPGFAAMRRLARLSMDAGAAGVMIAPPPSLRTDEQITTYFRQATEAIGDDVPWVLQDYPL 144 (313)
T ss_dssp CTTSEEEEEC---------CCSSHHHHHHHHHHHHHHTCSEEEECCCTTCCSHHHHHHHHHHHHHHHCTTSCEEEEECHH
T ss_pred cCCCcEEEec---------CCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHhCCCCCcEEEEeCcc
Confidence 3368999876 34566776665432 258898888441 34667777777777777 9999997654
Q ss_pred CcccccccccccCCCCChHHHHHHHHHHHHcCCeEEeec--CCCChHHHHHHHHHhh
Q 025860 184 EFYDADRKEWVQNTGVSDEDFVSYVSKWCEVGASLVGGC--CRTTPNTIKGIYRTLS 238 (247)
Q Consensus 184 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~iIGGC--CGt~P~hI~al~~~l~ 238 (247)
.. ...++++.+.+.+++. .+|+|== |.....++..+.+...
T Consensus 145 ~t----------g~~l~~~~~~~La~~~----pnIvgiKd~~~~~~~~~~~~~~~~~ 187 (313)
T 3dz1_A 145 TL----------SVVMTPKVIRQIVMDS----ASCVMLKHEDWPGLEKITTLRGFQK 187 (313)
T ss_dssp HH----------CCCCCHHHHHHHHHHC----SSEEEEEECCSSCHHHHHHHHHHHH
T ss_pred cc----------CcCCCHHHHHHHHHhC----CCEEEEEcCCCCCHHHHHHHHHhcC
Confidence 20 1124565555543332 4566521 2234677777766553
No 16
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=95.91 E-value=0.075 Score=46.47 Aligned_cols=58 Identities=12% Similarity=0.088 Sum_probs=41.2
Q ss_pred CCcEEEEEEEcCCCcccCCCcH---HHHHHHHHhCCCCe---EEEEcCC------------ChhHHHHHHHHHHhhcCCC
Q 025860 114 KIPAWFSFNSKDGVNVVSGDSL---LECASIAESCKRVV---SVGINCT------------PPRFISGLILIIKKVTAKP 175 (247)
Q Consensus 114 ~~pv~is~~~~~~~~l~~G~~~---~~~~~~~~~~~~~~---avG~NC~------------~p~~~~~~l~~l~~~~~~p 175 (247)
+.|+++++. |.++ .++++.+.+ .+++ +|=+|++ +++.+.++++.+++..+.|
T Consensus 93 ~~p~~~~i~---------g~~~~~~~~~a~~~~~-~g~d~~~~iein~~~P~~~g~~~~g~~~~~~~~ii~~vr~~~~~P 162 (314)
T 2e6f_A 93 KKPLFLSIS---------GLSVEENVAMVRRLAP-VAQEKGVLLELNLSCPNVPGKPQVAYDFEAMRTYLQQVSLAYGLP 162 (314)
T ss_dssp TCCEEEEEC---------CSSHHHHHHHHHHHHH-HHHHHCCEEEEECCCCCSTTCCCGGGSHHHHHHHHHHHHHHHCSC
T ss_pred CCcEEEEeC---------CCCHHHHHHHHHHHHH-hCCCcCceEEEEcCCCCCCCchhhcCCHHHHHHHHHHHHHhcCCC
Confidence 689999983 4444 445555555 3678 8889886 3456778888888877899
Q ss_pred EEEEeC
Q 025860 176 ILIYPN 181 (247)
Q Consensus 176 l~vyPN 181 (247)
+++.-.
T Consensus 163 v~vK~~ 168 (314)
T 2e6f_A 163 FGVKMP 168 (314)
T ss_dssp EEEEEC
T ss_pred EEEEEC
Confidence 987643
No 17
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=95.88 E-value=0.31 Score=41.47 Aligned_cols=120 Identities=17% Similarity=0.145 Sum_probs=74.4
Q ss_pred HHHHHhcCCCCEE---EEecCCCHH----HHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcH---HHHHHHHHhCCC
Q 025860 78 RVQVLVESAPDLI---AFETIPNKI----EAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSL---LECASIAESCKR 147 (247)
Q Consensus 78 q~~~l~~~gvD~i---~~ET~~~~~----E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~---~~~~~~~~~~~~ 147 (247)
+++..++.|+|.+ +..--.+.. +++.+++++++. +.|+++-... ++.++.+|.+. .++++.+.+ .|
T Consensus 104 ~v~~a~~~Ga~~v~~~l~~~~~~~~~~~~~~~~v~~~~~~~--g~~viv~~~~-~G~~l~~~~~~~~~~~~a~~a~~-~G 179 (273)
T 2qjg_A 104 TVEEAIRMGADAVSIHVNVGSDEDWEAYRDLGMIAETCEYW--GMPLIAMMYP-RGKHIQNERDPELVAHAARLGAE-LG 179 (273)
T ss_dssp CHHHHHHTTCSEEEEEEEETSTTHHHHHHHHHHHHHHHHHH--TCCEEEEEEE-CSTTCSCTTCHHHHHHHHHHHHH-TT
T ss_pred HHHHHHHcCCCEEEEEEecCCCCHHHHHHHHHHHHHHHHHc--CCCEEEEeCC-CCcccCCCCCHhHHHHHHHHHHH-cC
Confidence 5555667899999 556555444 455666777766 5788775432 33344444444 445455555 68
Q ss_pred CeEEEEcCC-ChhHHHHHHHHHHhhcCCCEEEEeCCCCcccccccccccCCCCChHHHHHHHHHHHHcCCeEE
Q 025860 148 VVSVGINCT-PPRFISGLILIIKKVTAKPILIYPNSGEFYDADRKEWVQNTGVSDEDFVSYVSKWCEVGASLV 219 (247)
Q Consensus 148 ~~avG~NC~-~p~~~~~~l~~l~~~~~~pl~vyPNaG~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~iI 219 (247)
++.|+++-. +++ .++++.+..+.|+++ .+|.. . .+++++.+.+.++++.|+.-+
T Consensus 180 ad~i~~~~~~~~~----~l~~i~~~~~ipvva--~GGi~--------~----~~~~~~~~~~~~~~~~Ga~gv 234 (273)
T 2qjg_A 180 ADIVKTSYTGDID----SFRDVVKGCPAPVVV--AGGPK--------T----NTDEEFLQMIKDAMEAGAAGV 234 (273)
T ss_dssp CSEEEECCCSSHH----HHHHHHHHCSSCEEE--ECCSC--------C----SSHHHHHHHHHHHHHHTCSEE
T ss_pred CCEEEECCCCCHH----HHHHHHHhCCCCEEE--EeCCC--------C----CCHHHHHHHHHHHHHcCCcEE
Confidence 999999843 443 455555556788655 44431 0 136778888888888898643
No 18
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=95.85 E-value=0.11 Score=45.52 Aligned_cols=105 Identities=14% Similarity=0.164 Sum_probs=73.2
Q ss_pred CCHHHHHHHHHHHHHHHhcCCCCEEEE-----ec-CCCHHHHHHHHHHHHhh-CCCCcEEEEEEEcCCCcccCCCcHHHH
Q 025860 66 ITVETLKDFHRRRVQVLVESAPDLIAF-----ET-IPNKIEAQAYAELLEEE-NIKIPAWFSFNSKDGVNVVSGDSLLEC 138 (247)
Q Consensus 66 ~s~~e~~~~~~~q~~~l~~~gvD~i~~-----ET-~~~~~E~~aa~~~~~~~-~~~~pv~is~~~~~~~~l~~G~~~~~~ 138 (247)
++.+.+++ .++.+++.|||.|++ |. .-+.+|-+.+++.+.+. +.+.||++.. .+.+..++
T Consensus 30 iD~~~l~~----lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGv---------g~~~t~~a 96 (301)
T 1xky_A 30 IDFAKTTK----LVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIAGT---------GSNNTHAS 96 (301)
T ss_dssp BCHHHHHH----HHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC---------CCSCHHHH
T ss_pred cCHHHHHH----HHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCceEEeCC---------CCCCHHHH
Confidence 66665555 777788899999876 43 23467777778766553 3368999877 34566766
Q ss_pred HHHHHh--CCCCeEEEEcCC-----ChhHHHHHHHHHHhhcCCCEEEEeCCC
Q 025860 139 ASIAES--CKRVVSVGINCT-----PPRFISGLILIIKKVTAKPILIYPNSG 183 (247)
Q Consensus 139 ~~~~~~--~~~~~avG~NC~-----~p~~~~~~l~~l~~~~~~pl~vyPNaG 183 (247)
++..+. ..|++++.+-.- +.+.+..-.+.+.+..+.|+++|=+-+
T Consensus 97 i~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~ 148 (301)
T 1xky_A 97 IDLTKKATEVGVDAVMLVAPYYNKPSQEGMYQHFKAIAESTPLPVMLYNVPG 148 (301)
T ss_dssp HHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHTCSSCEEEEECHH
T ss_pred HHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCcc
Confidence 665432 268999888652 346677777788888899999998754
No 19
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=95.83 E-value=0.096 Score=46.65 Aligned_cols=105 Identities=12% Similarity=0.062 Sum_probs=72.9
Q ss_pred CCHHHHHHHHHHHHHHHhcCCCCEEEE-----ec-CCCHHHHHHHHHHHHhh-CCCCcEEEEEEEcCCCcccCCCcHHHH
Q 025860 66 ITVETLKDFHRRRVQVLVESAPDLIAF-----ET-IPNKIEAQAYAELLEEE-NIKIPAWFSFNSKDGVNVVSGDSLLEC 138 (247)
Q Consensus 66 ~s~~e~~~~~~~q~~~l~~~gvD~i~~-----ET-~~~~~E~~aa~~~~~~~-~~~~pv~is~~~~~~~~l~~G~~~~~~ 138 (247)
++.+.+++ .++.+++.|||.|++ |. .-+.+|-+.+++.+.+. +.++||++.. .+.+..++
T Consensus 52 iD~~~l~~----lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGv---------g~~st~ea 118 (332)
T 2r8w_A 52 VDIEAFSA----LIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLMAGI---------GALRTDEA 118 (332)
T ss_dssp BCHHHHHH----HHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEE---------CCSSHHHH
T ss_pred cCHHHHHH----HHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEec---------CCCCHHHH
Confidence 67666555 777788899999876 43 23566777788776653 3368999887 34456666
Q ss_pred HHHHHh--CCCCeEEEEcCC-----ChhHHHHHHHHHHhhcCCCEEEEeCCC
Q 025860 139 ASIAES--CKRVVSVGINCT-----PPRFISGLILIIKKVTAKPILIYPNSG 183 (247)
Q Consensus 139 ~~~~~~--~~~~~avG~NC~-----~p~~~~~~l~~l~~~~~~pl~vyPNaG 183 (247)
++..+. ..|++++.+-.- +.+.+..-.+.+.+..+.|+++|=+-+
T Consensus 119 i~la~~A~~~Gadavlv~~P~Y~~~s~~~l~~~f~~VA~a~~lPiilYn~P~ 170 (332)
T 2r8w_A 119 VALAKDAEAAGADALLLAPVSYTPLTQEEAYHHFAAVAGATALPLAIYNNPT 170 (332)
T ss_dssp HHHHHHHHHHTCSEEEECCCCSSCCCHHHHHHHHHHHHHHCSSCEEEECCHH
T ss_pred HHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCcc
Confidence 655432 258999888652 346677777788888899999997643
No 20
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=95.74 E-value=0.38 Score=42.39 Aligned_cols=121 Identities=13% Similarity=0.158 Sum_probs=81.5
Q ss_pred CeEEEEecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCEEEE-----ecC-CCHHHHHHHHHHHHh-
Q 025860 38 PILVAASVGSYGAYLADGSEYSGNYGDAITVETLKDFHRRRVQVLVESAPDLIAF-----ETI-PNKIEAQAYAELLEE- 110 (247)
Q Consensus 38 ~~~VaGsiGP~g~~l~~g~eY~g~y~~~~s~~e~~~~~~~q~~~l~~~gvD~i~~-----ET~-~~~~E~~aa~~~~~~- 110 (247)
+-.++.-+-|+.. + ..++.+.+++ +++.+++.|||.|++ |.. -+.+|-+.+++.+.+
T Consensus 26 ~Gv~~a~vTPf~~----------d--g~iD~~~l~~----lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~ 89 (315)
T 3na8_A 26 HGIIGYTITPFAA----------D--GGLDLPALGR----SIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKT 89 (315)
T ss_dssp CEEEEECCCCBCT----------T--SSBCHHHHHH----HHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHH
T ss_pred CceEEEeeCcCCC----------C--CCcCHHHHHH----HHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHH
Confidence 4455666667642 1 1267665555 788888899998874 322 246787788887665
Q ss_pred hCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHh--CCCCeEEEEcCC-----ChhHHHHHHHHHHhhcCCCEEEEeCCC
Q 025860 111 ENIKIPAWFSFNSKDGVNVVSGDSLLECASIAES--CKRVVSVGINCT-----PPRFISGLILIIKKVTAKPILIYPNSG 183 (247)
Q Consensus 111 ~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~--~~~~~avG~NC~-----~p~~~~~~l~~l~~~~~~pl~vyPNaG 183 (247)
.+.++||++.. .+.+..++++..+. ..|++++.+-.- +.+.+..-.+.+.+..+.|+++|=+-+
T Consensus 90 ~~grvpViaGv---------g~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~ 160 (315)
T 3na8_A 90 VAHRVPTIVSV---------SDLTTAKTVRRAQFAESLGAEAVMVLPISYWKLNEAEVFQHYRAVGEAIGVPVMLYNNPG 160 (315)
T ss_dssp HTTSSCBEEEC---------CCSSHHHHHHHHHHHHHTTCSEEEECCCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHH
T ss_pred hCCCCcEEEec---------CCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCcEEEEeCcc
Confidence 33368999876 34566666665432 268999888662 346777777888888899999997654
No 21
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=95.73 E-value=0.16 Score=44.23 Aligned_cols=105 Identities=12% Similarity=0.085 Sum_probs=72.2
Q ss_pred CCHHHHHHHHHHHHHHHhcCCCCEEEE-----ecC-CCHHHHHHHHHHHHh-hCCCCcEEEEEEEcCCCcccCCCcHHHH
Q 025860 66 ITVETLKDFHRRRVQVLVESAPDLIAF-----ETI-PNKIEAQAYAELLEE-ENIKIPAWFSFNSKDGVNVVSGDSLLEC 138 (247)
Q Consensus 66 ~s~~e~~~~~~~q~~~l~~~gvD~i~~-----ET~-~~~~E~~aa~~~~~~-~~~~~pv~is~~~~~~~~l~~G~~~~~~ 138 (247)
++.+.+++ +++.+++.|||.|++ |.. -+.+|=+.+++.+.+ .+.+.||++.. .+.+..++
T Consensus 18 iD~~~l~~----lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv---------g~~~t~~a 84 (289)
T 2yxg_A 18 VDFDGLEE----NINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNGRVQVIAGA---------GSNCTEEA 84 (289)
T ss_dssp ECHHHHHH----HHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEC---------CCSSHHHH
T ss_pred cCHHHHHH----HHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC---------CCCCHHHH
Confidence 56655544 777888899999876 422 346677777776655 33368999777 34456666
Q ss_pred HHHHHh--CCCCeEEEEcCC-----ChhHHHHHHHHHHhhcCCCEEEEeCCC
Q 025860 139 ASIAES--CKRVVSVGINCT-----PPRFISGLILIIKKVTAKPILIYPNSG 183 (247)
Q Consensus 139 ~~~~~~--~~~~~avG~NC~-----~p~~~~~~l~~l~~~~~~pl~vyPNaG 183 (247)
++..+. ..|++++.+-.- +.+.+..-.+.+.+..+.|+++|=+-+
T Consensus 85 i~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~lPiilYn~P~ 136 (289)
T 2yxg_A 85 IELSVFAEDVGADAVLSITPYYNKPTQEGLRKHFGKVAESINLPIVLYNVPS 136 (289)
T ss_dssp HHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHH
T ss_pred HHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCcc
Confidence 655432 258898888652 346677777788888899999998753
No 22
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=95.68 E-value=0.082 Score=46.11 Aligned_cols=105 Identities=14% Similarity=0.221 Sum_probs=70.2
Q ss_pred CCHHHHHHHHHHHHHHHhcCCCCEEEE-----ec-CCCHHHHHHHHHHHHh-hCCCCcEEEEEEEcCCCcccCCCcHHHH
Q 025860 66 ITVETLKDFHRRRVQVLVESAPDLIAF-----ET-IPNKIEAQAYAELLEE-ENIKIPAWFSFNSKDGVNVVSGDSLLEC 138 (247)
Q Consensus 66 ~s~~e~~~~~~~q~~~l~~~gvD~i~~-----ET-~~~~~E~~aa~~~~~~-~~~~~pv~is~~~~~~~~l~~G~~~~~~ 138 (247)
++.+.+++ +++.+++.|||.|++ |. .-+.+|-+.+++.+.+ .+.+.||++.. .+.+..++
T Consensus 19 iD~~~l~~----lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~Gv---------g~~~t~~a 85 (291)
T 3a5f_A 19 VDFDKLSE----LIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNKRIPVIAGT---------GSNNTAAS 85 (291)
T ss_dssp BCHHHHHH----HHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC---------CCSSHHHH
T ss_pred cCHHHHHH----HHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC---------CcccHHHH
Confidence 56555444 777888899999876 43 2356677777776655 33368999877 34466666
Q ss_pred HHHHHh--CCCCeEEEEcCC-----ChhHHHHHHHHHHhhcCCCEEEEeCCC
Q 025860 139 ASIAES--CKRVVSVGINCT-----PPRFISGLILIIKKVTAKPILIYPNSG 183 (247)
Q Consensus 139 ~~~~~~--~~~~~avG~NC~-----~p~~~~~~l~~l~~~~~~pl~vyPNaG 183 (247)
++..+. ..|++++.+-.- +.+.+..-.+.+.+..+.|+++|=+-+
T Consensus 86 i~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~lPiilYn~P~ 137 (291)
T 3a5f_A 86 IAMSKWAESIGVDGLLVITPYYNKTTQKGLVKHFKAVSDAVSTPIIIYNVPG 137 (291)
T ss_dssp HHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHC-CTGGGCCSCEEEEECHH
T ss_pred HHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCcc
Confidence 655432 268999888662 235555556666777889999998754
No 23
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=95.66 E-value=0.18 Score=44.00 Aligned_cols=121 Identities=17% Similarity=0.164 Sum_probs=80.6
Q ss_pred CeEEEEecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCEEEE-ecCC-----CHHHHHHHHHHHHh-
Q 025860 38 PILVAASVGSYGAYLADGSEYSGNYGDAITVETLKDFHRRRVQVLVESAPDLIAF-ETIP-----NKIEAQAYAELLEE- 110 (247)
Q Consensus 38 ~~~VaGsiGP~g~~l~~g~eY~g~y~~~~s~~e~~~~~~~q~~~l~~~gvD~i~~-ET~~-----~~~E~~aa~~~~~~- 110 (247)
+-.+..-+-|+.. + ..++.+.+++ +++.+++.|||.|++ =|-. +.+|-+.+++.+.+
T Consensus 9 ~Gv~~a~vTPf~~----------d--g~iD~~~l~~----lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~ 72 (297)
T 3flu_A 9 QGSLVALITPMNQ----------D--GSIHYEQLRD----LIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKH 72 (297)
T ss_dssp CEEEEECCCCBCT----------T--SCBCHHHHHH----HHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHH
T ss_pred CeeEEeeeccCCC----------C--CCcCHHHHHH----HHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHH
Confidence 3455666777642 1 1266665554 777888899998876 2322 46787778887655
Q ss_pred hCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHh--CCCCeEEEEcCC-----ChhHHHHHHHHHHhhcCCCEEEEeCCC
Q 025860 111 ENIKIPAWFSFNSKDGVNVVSGDSLLECASIAES--CKRVVSVGINCT-----PPRFISGLILIIKKVTAKPILIYPNSG 183 (247)
Q Consensus 111 ~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~--~~~~~avG~NC~-----~p~~~~~~l~~l~~~~~~pl~vyPNaG 183 (247)
.+.+.||++.. .+.+..++++..+. ..|++++.+-.- +.+.+..-.+.+.+..+.|+++|=+-+
T Consensus 73 ~~grvpviaGv---------g~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~lPiilYn~P~ 143 (297)
T 3flu_A 73 VAKRVPVIAGT---------GANNTVEAIALSQAAEKAGADYTLSVVPYYNKPSQEGIYQHFKTIAEATSIPMIIYNVPG 143 (297)
T ss_dssp HTTSSCEEEEC---------CCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCCSCEEEEECHH
T ss_pred hCCCCcEEEeC---------CCcCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEECCc
Confidence 33368999876 34566776665432 258898877652 345677777888888899999997643
No 24
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=95.62 E-value=0.15 Score=44.58 Aligned_cols=120 Identities=13% Similarity=0.126 Sum_probs=80.7
Q ss_pred CeEEEEecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCEEEEe-cC-----CCHHHHHHHHHHHHhh
Q 025860 38 PILVAASVGSYGAYLADGSEYSGNYGDAITVETLKDFHRRRVQVLVESAPDLIAFE-TI-----PNKIEAQAYAELLEEE 111 (247)
Q Consensus 38 ~~~VaGsiGP~g~~l~~g~eY~g~y~~~~s~~e~~~~~~~q~~~l~~~gvD~i~~E-T~-----~~~~E~~aa~~~~~~~ 111 (247)
+-.+..-+-|+ . || .++.+.+++ +++.+++.|||.|++= |- -+.+|-+.+++.+.+.
T Consensus 10 ~Gv~~a~vTPf-~---dg---------~iD~~~l~~----lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~ 72 (301)
T 3m5v_A 10 IGAMTALITPF-K---NG---------KVDEQSYAR----LIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVET 72 (301)
T ss_dssp CEEEEECCCCE-E---TT---------EECHHHHHH----HHHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHH
T ss_pred CceeEeeecCc-C---CC---------CCCHHHHHH----HHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHH
Confidence 44556666776 3 22 256655554 7777888999998762 21 1467777788876653
Q ss_pred -CC-CCcEEEEEEEcCCCcccCCCcHHHHHHHHHh--CCCCeEEEEcCC-----ChhHHHHHHHHHHhhcCCCEEEEeCC
Q 025860 112 -NI-KIPAWFSFNSKDGVNVVSGDSLLECASIAES--CKRVVSVGINCT-----PPRFISGLILIIKKVTAKPILIYPNS 182 (247)
Q Consensus 112 -~~-~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~--~~~~~avG~NC~-----~p~~~~~~l~~l~~~~~~pl~vyPNa 182 (247)
+. +.||++.. .+.+..++++..+. ..|++++.+-.- +.+.+..-.+.+.+..+.|+++|=+-
T Consensus 73 ~~g~rvpviaGv---------g~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P 143 (301)
T 3m5v_A 73 CKGTKVKVLAGA---------GSNATHEAVGLAKFAKEHGADGILSVAPYYNKPTQQGLYEHYKAIAQSVDIPVLLYNVP 143 (301)
T ss_dssp HTTSSCEEEEEC---------CCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECH
T ss_pred hCCCCCeEEEeC---------CCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCc
Confidence 43 58999876 34566777665532 268999888662 34667777788888889999999764
Q ss_pred C
Q 025860 183 G 183 (247)
Q Consensus 183 G 183 (247)
+
T Consensus 144 ~ 144 (301)
T 3m5v_A 144 G 144 (301)
T ss_dssp H
T ss_pred h
Confidence 3
No 25
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=95.61 E-value=0.12 Score=45.24 Aligned_cols=121 Identities=17% Similarity=0.127 Sum_probs=80.4
Q ss_pred CeEEEEecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCEEEE-----ec-CCCHHHHHHHHHHHHh-
Q 025860 38 PILVAASVGSYGAYLADGSEYSGNYGDAITVETLKDFHRRRVQVLVESAPDLIAF-----ET-IPNKIEAQAYAELLEE- 110 (247)
Q Consensus 38 ~~~VaGsiGP~g~~l~~g~eY~g~y~~~~s~~e~~~~~~~q~~~l~~~gvD~i~~-----ET-~~~~~E~~aa~~~~~~- 110 (247)
+-.+..-+-|+.. | ..++.+.+++ .++.+++.|||.|++ |. .-+.+|-+.+++.+.+
T Consensus 13 ~Gv~~a~vTPF~~---d---------g~iD~~~l~~----lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~ 76 (303)
T 2wkj_A 13 RGVMAALLTPFDQ---Q---------QALDKASLRR----LVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEE 76 (303)
T ss_dssp CSEEEECCCCBCT---T---------SSBCHHHHHH----HHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHH
T ss_pred CceEEeeEcCCCC---C---------CCcCHHHHHH----HHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHH
Confidence 3455666777742 1 1266655554 777888899999976 43 2356677777876665
Q ss_pred hCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHh--CCCCeEEEEcCC-----ChhHHHHHHHHHHhhcC-CCEEEEeCC
Q 025860 111 ENIKIPAWFSFNSKDGVNVVSGDSLLECASIAES--CKRVVSVGINCT-----PPRFISGLILIIKKVTA-KPILIYPNS 182 (247)
Q Consensus 111 ~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~--~~~~~avG~NC~-----~p~~~~~~l~~l~~~~~-~pl~vyPNa 182 (247)
.+.+.||++.. .+.+..++++..+. ..|++++.+-.- +.+.+..-.+.+.+..+ .|+++|=+-
T Consensus 77 ~~grvpViaGv---------g~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~~lPiilYn~P 147 (303)
T 2wkj_A 77 AKGKIKLIAHV---------GCVSTAESQQLAASAKRYGFDAVSAVTPFYYPFSFEEHCDHYRAIIDSADGLPMVVYNIP 147 (303)
T ss_dssp HTTTSEEEEEC---------CCSSHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHHTTCCEEEEECH
T ss_pred hCCCCcEEEec---------CCCCHHHHHHHHHHHHhCCCCEEEecCCCCCCCCHHHHHHHHHHHHHhCCCCCEEEEeCc
Confidence 33368999876 34456666655432 258898888652 34667777777777778 999999874
Q ss_pred C
Q 025860 183 G 183 (247)
Q Consensus 183 G 183 (247)
+
T Consensus 148 ~ 148 (303)
T 2wkj_A 148 A 148 (303)
T ss_dssp H
T ss_pred c
Confidence 3
No 26
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=95.61 E-value=0.14 Score=44.61 Aligned_cols=104 Identities=13% Similarity=0.106 Sum_probs=72.5
Q ss_pred CCHHHHHHHHHHHHHHHhcCCCCEEEE-ecCC-----CHHHHHHHHHHHHhh-CCCCcEEEEEEEcCCCcccCCCcHHHH
Q 025860 66 ITVETLKDFHRRRVQVLVESAPDLIAF-ETIP-----NKIEAQAYAELLEEE-NIKIPAWFSFNSKDGVNVVSGDSLLEC 138 (247)
Q Consensus 66 ~s~~e~~~~~~~q~~~l~~~gvD~i~~-ET~~-----~~~E~~aa~~~~~~~-~~~~pv~is~~~~~~~~l~~G~~~~~~ 138 (247)
++.+.++. +++.+++.|||.|++ =|-. +.+|-+.+++.+.+. +.+.||++.. .+.+..++
T Consensus 19 iD~~~l~~----lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv---------g~~~t~~a 85 (291)
T 3tak_A 19 VDWKSLEK----LVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIAGT---------GANSTREA 85 (291)
T ss_dssp BCHHHHHH----HHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC---------CCSSHHHH
T ss_pred cCHHHHHH----HHHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCeEEEeC---------CCCCHHHH
Confidence 66665554 777788899998764 3433 578888888876653 3368999876 34466776
Q ss_pred HHHHHh--CCCCeEEEEcCC-----ChhHHHHHHHHHHhhcCCCEEEEeCC
Q 025860 139 ASIAES--CKRVVSVGINCT-----PPRFISGLILIIKKVTAKPILIYPNS 182 (247)
Q Consensus 139 ~~~~~~--~~~~~avG~NC~-----~p~~~~~~l~~l~~~~~~pl~vyPNa 182 (247)
++..+. ..|++++.+-.- +.+.+..-.+.+.+..+.|+++|=+-
T Consensus 86 i~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~~lPiilYn~P 136 (291)
T 3tak_A 86 IELTKAAKDLGADAALLVTPYYNKPTQEGLYQHYKAIAEAVELPLILYNVP 136 (291)
T ss_dssp HHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCCSCEEEEECH
T ss_pred HHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEecc
Confidence 665432 258898877652 34667777788888889999999764
No 27
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=95.59 E-value=0.11 Score=46.41 Aligned_cols=105 Identities=11% Similarity=0.153 Sum_probs=73.1
Q ss_pred CCHHHHHHHHHHHHHHHhcCCCCEEEE-----ecC-CCHHHHHHHHHHHHhh-CCCCcEEEEEEEcCCCcccCCCcHHHH
Q 025860 66 ITVETLKDFHRRRVQVLVESAPDLIAF-----ETI-PNKIEAQAYAELLEEE-NIKIPAWFSFNSKDGVNVVSGDSLLEC 138 (247)
Q Consensus 66 ~s~~e~~~~~~~q~~~l~~~gvD~i~~-----ET~-~~~~E~~aa~~~~~~~-~~~~pv~is~~~~~~~~l~~G~~~~~~ 138 (247)
++.+.+++ .++.+++.|||.|++ |.. -+.+|-+.+++.+.+. ..++||++.. .+.+..++
T Consensus 49 ID~~~l~~----lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGv---------g~~st~ea 115 (343)
T 2v9d_A 49 LDKPGTAA----LIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLIGT---------GGTNARET 115 (343)
T ss_dssp BCHHHHHH----HHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC---------CSSCHHHH
T ss_pred cCHHHHHH----HHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEec---------CCCCHHHH
Confidence 67665555 778888899999876 422 3466777778776653 3368999877 34566766
Q ss_pred HHHHHh--CCCCeEEEEcCC-----ChhHHHHHHHHHHhhcCCCEEEEeCCC
Q 025860 139 ASIAES--CKRVVSVGINCT-----PPRFISGLILIIKKVTAKPILIYPNSG 183 (247)
Q Consensus 139 ~~~~~~--~~~~~avG~NC~-----~p~~~~~~l~~l~~~~~~pl~vyPNaG 183 (247)
++..+. ..|++++.+-.- +.+.+..-.+.+.+..+.|+++|=+-+
T Consensus 116 i~la~~A~~~Gadavlv~~P~Y~~~s~~~l~~~f~~VA~a~~lPiilYn~P~ 167 (343)
T 2v9d_A 116 IELSQHAQQAGADGIVVINPYYWKVSEANLIRYFEQVADSVTLPVMLYNFPA 167 (343)
T ss_dssp HHHHHHHHHHTCSEEEEECCSSSCCCHHHHHHHHHHHHHTCSSCEEEEECHH
T ss_pred HHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCch
Confidence 665432 258898888652 346677777788888899999998754
No 28
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=95.50 E-value=0.18 Score=44.56 Aligned_cols=104 Identities=13% Similarity=0.120 Sum_probs=72.1
Q ss_pred CCHHHHHHHHHHHHHHHhcCCCCEEEE-----ec-CCCHHHHHHHHHHHHh-hCCCCcEEEEEEEcCCCcccCCCcHHHH
Q 025860 66 ITVETLKDFHRRRVQVLVESAPDLIAF-----ET-IPNKIEAQAYAELLEE-ENIKIPAWFSFNSKDGVNVVSGDSLLEC 138 (247)
Q Consensus 66 ~s~~e~~~~~~~q~~~l~~~gvD~i~~-----ET-~~~~~E~~aa~~~~~~-~~~~~pv~is~~~~~~~~l~~G~~~~~~ 138 (247)
++.+.+++ +++.+++.|||.|++ |. .-+.+|-+.+++.+.+ .+.+.||++.. .+.+..++
T Consensus 41 iD~~~l~~----lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGv---------g~~st~ea 107 (314)
T 3qze_A 41 LDWDSLAK----LVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIPVIAGT---------GANSTREA 107 (314)
T ss_dssp BCHHHHHH----HHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEEC---------CCSSHHHH
T ss_pred cCHHHHHH----HHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC---------CCcCHHHH
Confidence 66655554 777788899998876 31 1246777777876655 33368999876 34466776
Q ss_pred HHHHHh--CCCCeEEEEcCC-----ChhHHHHHHHHHHhhcCCCEEEEeCC
Q 025860 139 ASIAES--CKRVVSVGINCT-----PPRFISGLILIIKKVTAKPILIYPNS 182 (247)
Q Consensus 139 ~~~~~~--~~~~~avG~NC~-----~p~~~~~~l~~l~~~~~~pl~vyPNa 182 (247)
++..+. ..|++++.+-.- +.+.+..-.+.+.+..+.|+++|=+-
T Consensus 108 i~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P 158 (314)
T 3qze_A 108 VALTEAAKSGGADACLLVTPYYNKPTQEGMYQHFRHIAEAVAIPQILYNVP 158 (314)
T ss_dssp HHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHSCSCEEEEECH
T ss_pred HHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCc
Confidence 665532 258998887652 34667777788888889999999774
No 29
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=95.46 E-value=0.15 Score=44.96 Aligned_cols=102 Identities=17% Similarity=0.092 Sum_probs=70.5
Q ss_pred CCHHHHHHHHHHHHHHHhcCCCCEEEE-----ecC-CCHHHHHHHHHHHHhh-CCCCcEEEEEEEcCCCcccCCCcHHHH
Q 025860 66 ITVETLKDFHRRRVQVLVESAPDLIAF-----ETI-PNKIEAQAYAELLEEE-NIKIPAWFSFNSKDGVNVVSGDSLLEC 138 (247)
Q Consensus 66 ~s~~e~~~~~~~q~~~l~~~gvD~i~~-----ET~-~~~~E~~aa~~~~~~~-~~~~pv~is~~~~~~~~l~~G~~~~~~ 138 (247)
++.+.+++ .++.+++.|||.|++ |.. -+.+|=+.+++.+.+. +.++||++.. |.+..++
T Consensus 30 iD~~~l~~----lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~grvpViaGv----------g~~t~~a 95 (316)
T 3e96_A 30 IDWHHYKE----TVDRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVHGRALVVAGI----------GYATSTA 95 (316)
T ss_dssp BCHHHHHH----HHHHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEE----------CSSHHHH
T ss_pred CCHHHHHH----HHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEEe----------CcCHHHH
Confidence 66655554 888888999999875 311 2467777778766553 3368999887 2245666
Q ss_pred HHHHHh--CCCCeEEEEcCC-----ChhHHHHHHHHHHhhcCCCEEEEeC
Q 025860 139 ASIAES--CKRVVSVGINCT-----PPRFISGLILIIKKVTAKPILIYPN 181 (247)
Q Consensus 139 ~~~~~~--~~~~~avG~NC~-----~p~~~~~~l~~l~~~~~~pl~vyPN 181 (247)
++..+. ..|++++.+-.- +.+.+..-.+.+.+..+.|+++|=+
T Consensus 96 i~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~ 145 (316)
T 3e96_A 96 IELGNAAKAAGADAVMIHMPIHPYVTAGGVYAYFRDIIEALDFPSLVYFK 145 (316)
T ss_dssp HHHHHHHHHHTCSEEEECCCCCSCCCHHHHHHHHHHHHHHHTSCEEEEEC
T ss_pred HHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeC
Confidence 654432 258899887542 3567777788888888999999975
No 30
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=95.45 E-value=0.15 Score=44.65 Aligned_cols=105 Identities=12% Similarity=0.124 Sum_probs=72.9
Q ss_pred CCHHHHHHHHHHHHHHHhcCCCCEEEE-----ec-CCCHHHHHHHHHHHHh-hCCCCcEEEEEEEcCCCcccCCCcHHHH
Q 025860 66 ITVETLKDFHRRRVQVLVESAPDLIAF-----ET-IPNKIEAQAYAELLEE-ENIKIPAWFSFNSKDGVNVVSGDSLLEC 138 (247)
Q Consensus 66 ~s~~e~~~~~~~q~~~l~~~gvD~i~~-----ET-~~~~~E~~aa~~~~~~-~~~~~pv~is~~~~~~~~l~~G~~~~~~ 138 (247)
++.+.+++ +++.+++.|||.|++ |. .-+.+|-+.+++.+.+ .+.+.||++.. .+.+..++
T Consensus 18 iD~~~l~~----lv~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv---------g~~~t~~a 84 (297)
T 2rfg_A 18 VDEKALAG----LVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQGRVPVIAGA---------GSNNPVEA 84 (297)
T ss_dssp ECHHHHHH----HHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEEC---------CCSSHHHH
T ss_pred cCHHHHHH----HHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcc---------CCCCHHHH
Confidence 56655554 778888899999875 42 2356777777877655 33368999877 34466666
Q ss_pred HHHHHh--CCCCeEEEEcCC-----ChhHHHHHHHHHHhhcCCCEEEEeCCC
Q 025860 139 ASIAES--CKRVVSVGINCT-----PPRFISGLILIIKKVTAKPILIYPNSG 183 (247)
Q Consensus 139 ~~~~~~--~~~~~avG~NC~-----~p~~~~~~l~~l~~~~~~pl~vyPNaG 183 (247)
++..+. ..|++++.+-.- +.+.+..-.+.+.+..+.|+++|=+-+
T Consensus 85 i~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~ 136 (297)
T 2rfg_A 85 VRYAQHAQQAGADAVLCVAGYYNRPSQEGLYQHFKMVHDAIDIPIIVYNIPP 136 (297)
T ss_dssp HHHHHHHHHHTCSEEEECCCTTTCCCHHHHHHHHHHHHHHCSSCEEEEECHH
T ss_pred HHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCcc
Confidence 665432 258999888662 346677777788888899999998753
No 31
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=95.41 E-value=0.74 Score=40.18 Aligned_cols=105 Identities=13% Similarity=0.120 Sum_probs=72.3
Q ss_pred CCHHHHHHHHHHHHHHHhcCCCCEEEE-----ecC-CCHHHHHHHHHHHHhh-CCCCcEEEEEEEcCCCcccCCCcHHHH
Q 025860 66 ITVETLKDFHRRRVQVLVESAPDLIAF-----ETI-PNKIEAQAYAELLEEE-NIKIPAWFSFNSKDGVNVVSGDSLLEC 138 (247)
Q Consensus 66 ~s~~e~~~~~~~q~~~l~~~gvD~i~~-----ET~-~~~~E~~aa~~~~~~~-~~~~pv~is~~~~~~~~l~~G~~~~~~ 138 (247)
++.+.+++ +++.+++.|||.|++ |.. -+.+|=+.+++.+.+. +.++||++.... .+..++
T Consensus 22 iD~~~l~~----lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~---------~~t~~a 88 (300)
T 3eb2_A 22 VRADVMGR----LCDDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQRRVPVVAGVAS---------TSVADA 88 (300)
T ss_dssp BCHHHHHH----HHHHHHHTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCBEEEEEE---------SSHHHH
T ss_pred cCHHHHHH----HHHHHHHcCCCEEEECccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCC---------CCHHHH
Confidence 66665554 778888899999863 422 2567777788776553 436899998843 345665
Q ss_pred HHHHHh--CCCCeEEEEcCC-----ChhHHHHHHHHHHhhcCCCEEEEeCCC
Q 025860 139 ASIAES--CKRVVSVGINCT-----PPRFISGLILIIKKVTAKPILIYPNSG 183 (247)
Q Consensus 139 ~~~~~~--~~~~~avG~NC~-----~p~~~~~~l~~l~~~~~~pl~vyPNaG 183 (247)
++..+. ..|++++.+-.- +.+.+..-.+.+.+..+.|+++|=+-+
T Consensus 89 i~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~lPiilYn~P~ 140 (300)
T 3eb2_A 89 VAQAKLYEKLGADGILAILEAYFPLKDAQIESYFRAIADAVEIPVVIYTNPQ 140 (300)
T ss_dssp HHHHHHHHHHTCSEEEEEECCSSCCCHHHHHHHHHHHHHHCSSCEEEEECTT
T ss_pred HHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECcc
Confidence 554432 247888777542 356677777888888899999998765
No 32
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=95.41 E-value=0.17 Score=44.50 Aligned_cols=120 Identities=17% Similarity=0.184 Sum_probs=80.1
Q ss_pred eEEEEecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCEEEEe-cCC-----CHHHHHHHHHHHHh-h
Q 025860 39 ILVAASVGSYGAYLADGSEYSGNYGDAITVETLKDFHRRRVQVLVESAPDLIAFE-TIP-----NKIEAQAYAELLEE-E 111 (247)
Q Consensus 39 ~~VaGsiGP~g~~l~~g~eY~g~y~~~~s~~e~~~~~~~q~~~l~~~gvD~i~~E-T~~-----~~~E~~aa~~~~~~-~ 111 (247)
-.+..-+-|+.. | | .++.+.+++ +++.+++.|||.|++= |-. +.+|-+.+++.+.+ .
T Consensus 18 Gv~~a~vTPf~~---d-----g----~iD~~~l~~----lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~ 81 (304)
T 3l21_A 18 TLLTAMVTPFSG---D-----G----SLDTATAAR----LANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAV 81 (304)
T ss_dssp SEEEECCCCBCT---T-----S----CBCHHHHHH----HHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHH
T ss_pred ceEEEEECCCCC---C-----C----CcCHHHHHH----HHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHh
Confidence 355666777642 1 1 267665555 7788888999987752 222 46787788887665 3
Q ss_pred CCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHh--CCCCeEEEEcCC-----ChhHHHHHHHHHHhhcCCCEEEEeCCC
Q 025860 112 NIKIPAWFSFNSKDGVNVVSGDSLLECASIAES--CKRVVSVGINCT-----PPRFISGLILIIKKVTAKPILIYPNSG 183 (247)
Q Consensus 112 ~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~--~~~~~avG~NC~-----~p~~~~~~l~~l~~~~~~pl~vyPNaG 183 (247)
+.+.||++.. .+.+..++++..+. ..|++++.+-.- +.+.+..-.+.+.+..+.|+++|=+-+
T Consensus 82 ~grvpviaGv---------g~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~ 151 (304)
T 3l21_A 82 GDRARVIAGA---------GTYDTAHSIRLAKACAAEGAHGLLVVTPYYSKPPQRGLQAHFTAVADATELPMLLYDIPG 151 (304)
T ss_dssp TTTSEEEEEC---------CCSCHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHTSCSSCEEEEECHH
T ss_pred CCCCeEEEeC---------CCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCcc
Confidence 4468999886 33456666665432 258898888762 346677777888888899999997643
No 33
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=95.40 E-value=0.18 Score=44.44 Aligned_cols=105 Identities=19% Similarity=0.107 Sum_probs=72.5
Q ss_pred CCHHHHHHHHHHHHHHHhcCCCCEEEE-----ec-CCCHHHHHHHHHHHHh-hCCCCcEEEEEEEcCCCcccCCCcHHHH
Q 025860 66 ITVETLKDFHRRRVQVLVESAPDLIAF-----ET-IPNKIEAQAYAELLEE-ENIKIPAWFSFNSKDGVNVVSGDSLLEC 138 (247)
Q Consensus 66 ~s~~e~~~~~~~q~~~l~~~gvD~i~~-----ET-~~~~~E~~aa~~~~~~-~~~~~pv~is~~~~~~~~l~~G~~~~~~ 138 (247)
++.+.+++ .++.+++.|||.|++ |. .-+.+|-+.+++.+.+ .+.+.||++.. .+ +..++
T Consensus 30 iD~~~l~~----lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGv---------g~-st~~a 95 (314)
T 3d0c_A 30 IDWKGLDD----NVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNGRATVVAGI---------GY-SVDTA 95 (314)
T ss_dssp BCHHHHHH----HHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEE---------CS-SHHHH
T ss_pred CCHHHHHH----HHHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhCCCCeEEecC---------Cc-CHHHH
Confidence 67665555 777888899999875 32 2346677777776655 33368999877 33 66666
Q ss_pred HHHHHh--CCCCeEEEEcCC-----ChhHHHHHHHHHHhhcCCCEEEEeCCCC
Q 025860 139 ASIAES--CKRVVSVGINCT-----PPRFISGLILIIKKVTAKPILIYPNSGE 184 (247)
Q Consensus 139 ~~~~~~--~~~~~avG~NC~-----~p~~~~~~l~~l~~~~~~pl~vyPNaG~ 184 (247)
++..+. ..|++++.+-.- +.+.+..-.+.+.+..+.|+++|=..|.
T Consensus 96 i~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~tg~ 148 (314)
T 3d0c_A 96 IELGKSAIDSGADCVMIHQPVHPYITDAGAVEYYRNIIEALDAPSIIYFKDAH 148 (314)
T ss_dssp HHHHHHHHHTTCSEEEECCCCCSCCCHHHHHHHHHHHHHHSSSCEEEEECCTT
T ss_pred HHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence 655432 268999888662 3466777777888888999999974443
No 34
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=95.32 E-value=0.35 Score=42.11 Aligned_cols=105 Identities=11% Similarity=0.058 Sum_probs=72.7
Q ss_pred CCHHHHHHHHHHHHHHHhcCCCCEEEE-----ecC-CCHHHHHHHHHHHHhh-CCCCcEEEEEEEcCCCcccCCCcHHHH
Q 025860 66 ITVETLKDFHRRRVQVLVESAPDLIAF-----ETI-PNKIEAQAYAELLEEE-NIKIPAWFSFNSKDGVNVVSGDSLLEC 138 (247)
Q Consensus 66 ~s~~e~~~~~~~q~~~l~~~gvD~i~~-----ET~-~~~~E~~aa~~~~~~~-~~~~pv~is~~~~~~~~l~~G~~~~~~ 138 (247)
++.+.+++ +++.+++.|||.|++ |.. -+.+|-+.+++.+.+. +.+.||++.. .+.+..++
T Consensus 21 iD~~~l~~----lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv---------g~~~t~~a 87 (294)
T 3b4u_A 21 VDIDAMIA----HARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIAPSRIVTGV---------LVDSIEDA 87 (294)
T ss_dssp BCHHHHHH----HHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEE---------CCSSHHHH
T ss_pred cCHHHHHH----HHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC---------CCccHHHH
Confidence 67666555 777888899999876 422 3467777888877664 3358999887 34466666
Q ss_pred HHHHHh--CCCCeEEEEcCC------ChhHHHHHHHHHHhhc---CCCEEEEeCCC
Q 025860 139 ASIAES--CKRVVSVGINCT------PPRFISGLILIIKKVT---AKPILIYPNSG 183 (247)
Q Consensus 139 ~~~~~~--~~~~~avG~NC~------~p~~~~~~l~~l~~~~---~~pl~vyPNaG 183 (247)
++..+. ..|++++.+-.- +.+.+..-.+.+.+.. +.|+++|=+-+
T Consensus 88 i~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~p~~~lPiilYn~P~ 143 (294)
T 3b4u_A 88 ADQSAEALNAGARNILLAPPSYFKNVSDDGLFAWFSAVFSKIGKDARDILVYNIPS 143 (294)
T ss_dssp HHHHHHHHHTTCSEEEECCCCSSCSCCHHHHHHHHHHHHHHHCTTCCCEEEEECHH
T ss_pred HHHHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhcCCCCCcEEEEECcc
Confidence 665432 258999888652 2355666677777777 89999998754
No 35
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=95.31 E-value=0.2 Score=44.05 Aligned_cols=105 Identities=8% Similarity=-0.011 Sum_probs=72.2
Q ss_pred CCHHHHHHHHHHHHHHHhcCCCCEEEE-----ecC-CCHHHHHHHHHHHHhh-CCCCcEEEEEEEcCCCcccCCCcHHHH
Q 025860 66 ITVETLKDFHRRRVQVLVESAPDLIAF-----ETI-PNKIEAQAYAELLEEE-NIKIPAWFSFNSKDGVNVVSGDSLLEC 138 (247)
Q Consensus 66 ~s~~e~~~~~~~q~~~l~~~gvD~i~~-----ET~-~~~~E~~aa~~~~~~~-~~~~pv~is~~~~~~~~l~~G~~~~~~ 138 (247)
++.+.++ .+++.+++.|||.|++ |.. -+.+|=+.+++.+.+. +.++||++.. .+.+..++
T Consensus 32 iD~~~l~----~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv---------g~~~t~~a 98 (307)
T 3s5o_A 32 VDYGKLE----ENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLAGS---------GCESTQAT 98 (307)
T ss_dssp BCHHHHH----HHHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEEEC---------CCSSHHHH
T ss_pred cCHHHHH----HHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCCCCcEEEec---------CCCCHHHH
Confidence 6665544 4888889999999875 322 2467777888877664 3468998876 23466666
Q ss_pred HHHHHh--CCCCeEEEEcCC-------ChhHHHHHHHHHHhhcCCCEEEEeCCC
Q 025860 139 ASIAES--CKRVVSVGINCT-------PPRFISGLILIIKKVTAKPILIYPNSG 183 (247)
Q Consensus 139 ~~~~~~--~~~~~avG~NC~-------~p~~~~~~l~~l~~~~~~pl~vyPNaG 183 (247)
++..+. ..|++++.+-.- +.+.+..-.+.+.+..+.|+++|=+-+
T Consensus 99 i~la~~A~~~Gadavlv~~P~y~~~~~s~~~l~~~f~~ia~a~~lPiilYn~P~ 152 (307)
T 3s5o_A 99 VEMTVSMAQVGADAAMVVTPCYYRGRMSSAALIHHYTKVADLSPIPVVLYSVPA 152 (307)
T ss_dssp HHHHHHHHHTTCSEEEEECCCTTGGGCCHHHHHHHHHHHHHHCSSCEEEEECHH
T ss_pred HHHHHHHHHcCCCEEEEcCCCcCCCCCCHHHHHHHHHHHHhhcCCCEEEEeCCc
Confidence 655432 268999888542 234667777778788899999998743
No 36
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=95.23 E-value=0.22 Score=43.35 Aligned_cols=105 Identities=13% Similarity=0.157 Sum_probs=71.4
Q ss_pred CCHHHHHHHHHHHHHHHhcCCCCEEEEe-cC-----CCHHHHHHHHHHHHhh-CCCCcEEEEEEEcCCCcccCCCcHHHH
Q 025860 66 ITVETLKDFHRRRVQVLVESAPDLIAFE-TI-----PNKIEAQAYAELLEEE-NIKIPAWFSFNSKDGVNVVSGDSLLEC 138 (247)
Q Consensus 66 ~s~~e~~~~~~~q~~~l~~~gvD~i~~E-T~-----~~~~E~~aa~~~~~~~-~~~~pv~is~~~~~~~~l~~G~~~~~~ 138 (247)
++.+.+++ +++.+++.|||.|++= |- -+.+|=+.+++.+.+. +.+.||++.. .+.+..++
T Consensus 20 iD~~~l~~----lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGv---------g~~~t~~a 86 (292)
T 3daq_A 20 VNLEALKA----HVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDKRVPVIAGT---------GTNDTEKS 86 (292)
T ss_dssp ECHHHHHH----HHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC---------CCSCHHHH
T ss_pred cCHHHHHH----HHHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCcEEEeC---------CcccHHHH
Confidence 56655444 7788888999998752 21 1367777788766553 3468999876 33456666
Q ss_pred HHHHHh--CCCCeEEEEcCC-----ChhHHHHHHHHHHhhcCCCEEEEeCCC
Q 025860 139 ASIAES--CKRVVSVGINCT-----PPRFISGLILIIKKVTAKPILIYPNSG 183 (247)
Q Consensus 139 ~~~~~~--~~~~~avG~NC~-----~p~~~~~~l~~l~~~~~~pl~vyPNaG 183 (247)
++..+. ..|++++.+-.- +.+.+..-.+.+.+..+.|+++|=+-+
T Consensus 87 i~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~~lPiilYn~P~ 138 (292)
T 3daq_A 87 IQASIQAKALGADAIMLITPYYNKTNQRGLVKHFEAIADAVKLPVVLYNVPS 138 (292)
T ss_dssp HHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHHCSCEEEEECHH
T ss_pred HHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeccc
Confidence 665432 248888877652 346677777788777899999997643
No 37
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=95.21 E-value=0.23 Score=43.30 Aligned_cols=105 Identities=11% Similarity=0.046 Sum_probs=72.2
Q ss_pred CCHHHHHHHHHHHHHHHhc-CCCCEEEE-----ecC-CCHHHHHHHHHHHHh-hCCCCcEEEEEEEcCCCcccCCCcHHH
Q 025860 66 ITVETLKDFHRRRVQVLVE-SAPDLIAF-----ETI-PNKIEAQAYAELLEE-ENIKIPAWFSFNSKDGVNVVSGDSLLE 137 (247)
Q Consensus 66 ~s~~e~~~~~~~q~~~l~~-~gvD~i~~-----ET~-~~~~E~~aa~~~~~~-~~~~~pv~is~~~~~~~~l~~G~~~~~ 137 (247)
++.+.+++ +++.+++ .|||.|++ |.. -+.+|-+.+++.+.+ .+.+.||++.. .+.+..+
T Consensus 21 iD~~~l~~----lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv---------g~~~t~~ 87 (293)
T 1f6k_A 21 INEKGLRQ----IIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIAQV---------GSVNLKE 87 (293)
T ss_dssp BCHHHHHH----HHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEC---------CCSCHHH
T ss_pred cCHHHHHH----HHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEec---------CCCCHHH
Confidence 67665555 7888888 99999876 422 346677777776655 33368999777 3446676
Q ss_pred HHHHHHh--CCCCeEEEEcCC-----ChhHHHHHHHHHHhhcCCCEEEEeCCC
Q 025860 138 CASIAES--CKRVVSVGINCT-----PPRFISGLILIIKKVTAKPILIYPNSG 183 (247)
Q Consensus 138 ~~~~~~~--~~~~~avG~NC~-----~p~~~~~~l~~l~~~~~~pl~vyPNaG 183 (247)
+++..+. ..|++++.+-.- +.+.+..-.+.+.+..+.|+++|=|-+
T Consensus 88 ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~lPiilYn~P~ 140 (293)
T 1f6k_A 88 AVELGKYATELGYDCLSAVTPFYYKFSFPEIKHYYDTIIAETGSNMIVYSIPF 140 (293)
T ss_dssp HHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHHCCCEEEEECHH
T ss_pred HHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEECcc
Confidence 6665432 258898887652 346667777777777889999998754
No 38
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=95.03 E-value=0.2 Score=43.68 Aligned_cols=81 Identities=14% Similarity=0.079 Sum_probs=56.8
Q ss_pred CCcEEEEEEEcCCCcccCCCc---HHHHHHHHHhCCCCe-EEEEcCC------------ChhHHHHHHHHHHhhcCCCEE
Q 025860 114 KIPAWFSFNSKDGVNVVSGDS---LLECASIAESCKRVV-SVGINCT------------PPRFISGLILIIKKVTAKPIL 177 (247)
Q Consensus 114 ~~pv~is~~~~~~~~l~~G~~---~~~~~~~~~~~~~~~-avG~NC~------------~p~~~~~~l~~l~~~~~~pl~ 177 (247)
+.|+++++. |.+ +.++++.+.+ .+++ +|=+|++ +|+.+.++++.+++..+.|++
T Consensus 93 ~~p~~~~i~---------g~~~~~~~~~a~~~~~-~g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~vr~~~~~Pv~ 162 (311)
T 1jub_A 93 EGPIFFSIA---------GMSAAENIAMLKKIQE-SDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFTFFTKPLG 162 (311)
T ss_dssp SSCCEEEEC---------CSSHHHHHHHHHHHHH-SCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTTTCCSCEE
T ss_pred CCCEEEEcC---------CCCHHHHHHHHHHHHh-cCCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHHHHhcCCCEE
Confidence 589999883 444 4455665655 4788 8888885 456677888888887789998
Q ss_pred EEeCCCCcccccccccccCCCCChHHHHHHHHHHHHcCCeEE
Q 025860 178 IYPNSGEFYDADRKEWVQNTGVSDEDFVSYVSKWCEVGASLV 219 (247)
Q Consensus 178 vyPNaG~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~iI 219 (247)
+.-+.+ | +.+++.+.++...+.|+..|
T Consensus 163 vKi~~~---------~------~~~~~~~~a~~~~~~G~d~i 189 (311)
T 1jub_A 163 VKLPPY---------F------DLVHFDIMAEILNQFPLTYV 189 (311)
T ss_dssp EEECCC---------C------SHHHHHHHHHHHTTSCCCEE
T ss_pred EEECCC---------C------CHHHHHHHHHHHHHcCCcEE
Confidence 864332 1 24567777788888887754
No 39
>3i4e_A Isocitrate lyase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.69A {Burkholderia pseudomallei}
Probab=94.93 E-value=0.9 Score=41.91 Aligned_cols=134 Identities=15% Similarity=0.147 Sum_probs=89.3
Q ss_pred HHHHHHhcCCCCEEEEecCC---------------CHHHHHH----HHHHHHhhCCCCcEEEEEEEcCCC----------
Q 025860 77 RRVQVLVESAPDLIAFETIP---------------NKIEAQA----YAELLEEENIKIPAWFSFNSKDGV---------- 127 (247)
Q Consensus 77 ~q~~~l~~~gvD~i~~ET~~---------------~~~E~~a----a~~~~~~~~~~~pv~is~~~~~~~---------- 127 (247)
+.++.|+++||-.|-||-.. +.+|+.. +.++.+.. +.+++|.--.+...
T Consensus 171 ~~vk~~~~aGaaGi~iEDq~~~~KkCGH~~gk~lv~~~e~v~rI~Aar~A~~~~--g~d~~IiARTDa~~a~l~~s~~d~ 248 (439)
T 3i4e_A 171 ELMKAMIEAGASGVHFEDQLASVKKCGHMGGKVLVPTREAVAKLTAARLAADVM--GTPTVLVARTDAEAADLITSDIDD 248 (439)
T ss_dssp HHHHHHHHHTCSEEEEESBCGGGCBCSTTCBCCBCCHHHHHHHHHHHHHHHHHH--TCCCEEEEEECTTTCCEESCCCCT
T ss_pred HHHHHHHHcCCEEEEEeCCCCCccccCCCCCCeecCHHHHHHHHHHHHHHHHhc--CCCeEEEEEcCccccccccccccc
Confidence 47788889999999999764 2455444 33333333 34666655554311
Q ss_pred ---------cccCC-----CcHHHHHHHHHh-CCCCeEEEEcC-C-ChhHHHHHHHHHHhhcCCCEEEEeCCCCcccccc
Q 025860 128 ---------NVVSG-----DSLLECASIAES-CKRVVSVGINC-T-PPRFISGLILIIKKVTAKPILIYPNSGEFYDADR 190 (247)
Q Consensus 128 ---------~l~~G-----~~~~~~~~~~~~-~~~~~avG~NC-~-~p~~~~~~l~~l~~~~~~pl~vyPNaG~~~d~~~ 190 (247)
++..| ..++++++.+.. ..++|+|=+-. . +++.+..+.+.+.......+++|++...
T Consensus 249 ~d~~fi~G~r~~eg~~~~~~gldeAI~Ra~AY~~GAD~if~E~~~~~~eei~~f~~~v~~~~P~~~l~~~~sPs------ 322 (439)
T 3i4e_A 249 NDKPYLTGERTVEGFFRTKPGLEQAISRGLAYAPYADLIWCETGKPDLEYAKKFAEAIHKQFPGKLLSYNCSPS------ 322 (439)
T ss_dssp TTGGGEEEEECTTSCEEECCSHHHHHHHHHHHTTTCSEEEECCSSCCHHHHHHHHHHHHHHSTTCEEEEECCSS------
T ss_pred ccchhhcccCcccccccccCCHHHHHHHHHHHHhhCCEEEecCCCCCHHHHHHHHHHhcccCCceEEeeCCCCC------
Confidence 11112 468999888764 23899998854 3 6888888888887655566888876643
Q ss_pred cccccCCCCChHHHHHHHHHHHHcCCeEEe
Q 025860 191 KEWVQNTGVSDEDFVSYVSKWCEVGASLVG 220 (247)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~G~~iIG 220 (247)
-.|... ++++++..|..++.++|++++=
T Consensus 323 fnw~~~--~~~~~~~~f~~eL~~lGv~~v~ 350 (439)
T 3i4e_A 323 FNWKKN--LDDATIAKFQKELGAMGYKFQF 350 (439)
T ss_dssp SCHHHH--SCHHHHHTHHHHHHHHTCCEEE
T ss_pred CcCccc--CCHHHHHHHHHHHHHcCCeEEE
Confidence 245432 5688888889999999988764
No 40
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=94.82 E-value=0.61 Score=40.42 Aligned_cols=103 Identities=18% Similarity=0.251 Sum_probs=70.4
Q ss_pred CCHHHHHHHHHHHHHHHhcCCCCEEEE-----ecC-CCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHH
Q 025860 66 ITVETLKDFHRRRVQVLVESAPDLIAF-----ETI-PNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECA 139 (247)
Q Consensus 66 ~s~~e~~~~~~~q~~~l~~~gvD~i~~-----ET~-~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~ 139 (247)
++.+.+++ +++.+++.|||.|++ |.. -+.+|-+.+++.+.+...+ |++.. .+.+..+++
T Consensus 17 iD~~~l~~----lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~g--ViaGv---------g~~~t~~ai 81 (288)
T 2nuw_A 17 VNVDALKT----HAKNLLEKGIDAIFVNGTTGLGPALSKDEKRQNLNALYDVTHK--LIFQV---------GSLNLNDVM 81 (288)
T ss_dssp BCHHHHHH----HHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHTTTCSC--EEEEC---------CCSCHHHHH
T ss_pred cCHHHHHH----HHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--eEEee---------CCCCHHHHH
Confidence 67665555 777788899999876 522 3567878888887765423 55444 345667776
Q ss_pred HHHHh--CCCCeEEEEcCC------ChhHHHHHHHHHHhhcCCCEEEEeCCC
Q 025860 140 SIAES--CKRVVSVGINCT------PPRFISGLILIIKKVTAKPILIYPNSG 183 (247)
Q Consensus 140 ~~~~~--~~~~~avG~NC~------~p~~~~~~l~~l~~~~~~pl~vyPNaG 183 (247)
+..+. ..|++++.+-.- +.+.+..-.+.+.+..+.|+++|=+-+
T Consensus 82 ~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~~lPiilYn~P~ 133 (288)
T 2nuw_A 82 ELVKFSNEMDILGVSSHSPYYFPRLPEKFLAKYYEEIARISSHSLYIYNYPA 133 (288)
T ss_dssp HHHHHHHTSCCSEEEECCCCSSCSCCHHHHHHHHHHHHHHCCSCEEEEECHH
T ss_pred HHHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhcCCCEEEEECch
Confidence 65532 368999888652 235566677777778899999998753
No 41
>3eol_A Isocitrate lyase; seattle structural center for infectious disease, ssgcid; 2.00A {Brucella melitensis} PDB: 3oq8_A 3e5b_A 3p0x_A*
Probab=94.66 E-value=1.2 Score=40.95 Aligned_cols=134 Identities=11% Similarity=0.142 Sum_probs=88.1
Q ss_pred HHHHHHhcCCCCEEEEecCCC---------------HHHHHH----HHHHHHhhCCCCcEEEEEEEcCCC----------
Q 025860 77 RRVQVLVESAPDLIAFETIPN---------------KIEAQA----YAELLEEENIKIPAWFSFNSKDGV---------- 127 (247)
Q Consensus 77 ~q~~~l~~~gvD~i~~ET~~~---------------~~E~~a----a~~~~~~~~~~~pv~is~~~~~~~---------- 127 (247)
+.++.|.++||-.|-||-... .+|+.. +.++.+..+ .+++|---.+...
T Consensus 164 rtVk~~~~AGaAGi~IEDQ~~~~KkCGH~~gk~lvp~ee~v~rI~AAr~A~~~~g--~d~vIiARTDA~~a~l~~s~~d~ 241 (433)
T 3eol_A 164 EIMKAYIEAGAAGVHFEDQLASEKKCGHLGGKVLIPTAAHIRNLNAARLAADVMG--TPTLIVARTDAEAAKLLTSDIDE 241 (433)
T ss_dssp HHHHHHHHHTCSEEEEESBCC---------CCEECCHHHHHHHHHHHHHHHHHHT--CCCEEEEEECTTTCCEESCCCST
T ss_pred HHHHHHHHcCCeEEEEecCCCCCCcCCCCCCCcccCHHHHHHHHHHHHHHHHhcC--CCEEEEEEcCCccccccccCccc
Confidence 368888899999999997653 445444 333333333 4555555444211
Q ss_pred -----------cccCC-----CcHHHHHHHHHh-CCCCeEEEEcCC--ChhHHHHHHHHHHhhcCCCEEEEeCCCCcccc
Q 025860 128 -----------NVVSG-----DSLLECASIAES-CKRVVSVGINCT--PPRFISGLILIIKKVTAKPILIYPNSGEFYDA 188 (247)
Q Consensus 128 -----------~l~~G-----~~~~~~~~~~~~-~~~~~avG~NC~--~p~~~~~~l~~l~~~~~~pl~vyPNaG~~~d~ 188 (247)
++..| ..++++++.... ..++|.|=+-.. +++.+..+.+.+......++++|++...
T Consensus 242 rd~~fl~g~g~r~~eG~y~~~~gld~AI~Ra~AY~~GAD~If~e~~~~~~eei~~f~~~v~~~~P~~~L~~~~sPs---- 317 (433)
T 3eol_A 242 RDQPFVDYEAGRTAEGFYQVKNGIEPCIARAIAYAPYCDLIWMETSKPDLAQARRFAEAVHKAHPGKLLAYNCSPS---- 317 (433)
T ss_dssp TTGGGBCSSSCBCTTCCEEBCCSHHHHHHHHHHHGGGCSEEEECCSSCCHHHHHHHHHHHHHHSTTCCEEEECCSS----
T ss_pred ccccceeccCcccccccccccCCHHHHHHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHHhcccCCCcccccCCCCC----
Confidence 11222 568999888753 238999988653 6788888888887655566788876532
Q ss_pred cccccccCCCCChHHHHHHHHHHHHcCCeEEe
Q 025860 189 DRKEWVQNTGVSDEDFVSYVSKWCEVGASLVG 220 (247)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~iIG 220 (247)
-.|... ++++++..+..++.++|++++=
T Consensus 318 --fnw~~~--~~~~~~~~f~~eLa~lGv~~v~ 345 (433)
T 3eol_A 318 --FNWKKN--LDDATIAKFQRELGAMGYKFQF 345 (433)
T ss_dssp --SCHHHH--SCHHHHHHHHHHHHHHTEEEEE
T ss_pred --Cccccc--CChhHHhHHHHHHHHcCCeEEE
Confidence 135332 5678888888999999988764
No 42
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=94.58 E-value=0.7 Score=39.96 Aligned_cols=103 Identities=11% Similarity=0.103 Sum_probs=69.5
Q ss_pred CCHHHHHHHHHHHHHHHhcCCCCEEEE-----ecC-CCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHH
Q 025860 66 ITVETLKDFHRRRVQVLVESAPDLIAF-----ETI-PNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECA 139 (247)
Q Consensus 66 ~s~~e~~~~~~~q~~~l~~~gvD~i~~-----ET~-~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~ 139 (247)
++.+.+++ +++.+++.|||.|++ |.. -+.+|=+.+++.+.+...+ |++.. .+.+..+++
T Consensus 16 iD~~~l~~----lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g--vi~Gv---------g~~~t~~ai 80 (286)
T 2r91_A 16 LDPELFAN----HVKNITSKGVDVVFVAGTTGLGPALSLQEKMELTDAATSAARR--VIVQV---------ASLNADEAI 80 (286)
T ss_dssp ECHHHHHH----HHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHHHHCSS--EEEEC---------CCSSHHHHH
T ss_pred cCHHHHHH----HHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--EEEee---------CCCCHHHHH
Confidence 56655544 778888899999876 422 3567878888877765423 55444 344667666
Q ss_pred HHHHh--CCCCeEEEEcCC------ChhHHHHHHHHHHhhcCCCEEEEeCCC
Q 025860 140 SIAES--CKRVVSVGINCT------PPRFISGLILIIKKVTAKPILIYPNSG 183 (247)
Q Consensus 140 ~~~~~--~~~~~avG~NC~------~p~~~~~~l~~l~~~~~~pl~vyPNaG 183 (247)
+..+. ..|++++.+-.- +.+.+..-.+.+.+..+.|+++|=+-+
T Consensus 81 ~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~~lPiilYn~P~ 132 (286)
T 2r91_A 81 ALAKYAESRGAEAVASLPPYYFPRLSERQIAKYFRDLCSAVSIPVFLYNYPA 132 (286)
T ss_dssp HHHHHHHHTTCSEEEECCSCSSTTCCHHHHHHHHHHHHHHCSSCEEEEECHH
T ss_pred HHHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhcCCCEEEEeChh
Confidence 65432 268999888652 235566677777778899999998753
No 43
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=94.57 E-value=1 Score=39.48 Aligned_cols=118 Identities=13% Similarity=0.070 Sum_probs=72.2
Q ss_pred HhcCCCCEEEEecC--CCH------HHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCc---HHHHHHHHHhCCCCeE
Q 025860 82 LVESAPDLIAFETI--PNK------IEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDS---LLECASIAESCKRVVS 150 (247)
Q Consensus 82 l~~~gvD~i~~ET~--~~~------~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~---~~~~~~~~~~~~~~~a 150 (247)
.++.|+|++-+=.. ++. .+++.+.+.+++. ++|+++-+-..+...-.+..+ +.++++.+.+ .|+|.
T Consensus 117 a~~~GAdaV~vlv~~~~d~~~~~~~~~i~~v~~~~~~~--G~p~lv~~~~~g~~v~~~~~~~~~v~~aa~~a~~-lGaD~ 193 (304)
T 1to3_A 117 VKRDGAKALKLLVLWRSDEDAQQRLNMVKEFNELCHSN--GLLSIIEPVVRPPRCGDKFDREQAIIDAAKELGD-SGADL 193 (304)
T ss_dssp HHHTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHTT--TCEEEEEEEECCCSSCSCCCHHHHHHHHHHHHTT-SSCSE
T ss_pred HHHcCCCEEEEEEEcCCCccHHHHHHHHHHHHHHHHHc--CCcEEEEEECCCCccccCCChhHHHHHHHHHHHH-cCCCE
Confidence 45589999863322 222 4555556666665 689888875544322112333 5666766665 68999
Q ss_pred EEEcCC-----ChhHHHHHHHHHHhhcCCCEEEEeCCCCcccccccccccCCCCChHHHHHHHHHHHHcCCeE
Q 025860 151 VGINCT-----PPRFISGLILIIKKVTAKPILIYPNSGEFYDADRKEWVQNTGVSDEDFVSYVSKWCEVGASL 218 (247)
Q Consensus 151 vG~NC~-----~p~~~~~~l~~l~~~~~~pl~vyPNaG~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~i 218 (247)
|++.-. +++.+..+++........|.++-. +| .++++|.+.++..++.|++.
T Consensus 194 iKv~~~~~~~g~~~~~~~vv~~~~~~~~~P~Vv~a-GG---------------~~~~~~~~~~~~a~~aGa~G 250 (304)
T 1to3_A 194 YKVEMPLYGKGARSDLLTASQRLNGHINMPWVILS-SG---------------VDEKLFPRAVRVAMEAGASG 250 (304)
T ss_dssp EEECCGGGGCSCHHHHHHHHHHHHHTCCSCEEECC-TT---------------SCTTTHHHHHHHHHHTTCCE
T ss_pred EEeCCCcCCCCCHHHHHHHHHhccccCCCCeEEEe-cC---------------CCHHHHHHHHHHHHHcCCeE
Confidence 999984 567777777776555677722211 11 13456777778788888743
No 44
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=94.52 E-value=0.4 Score=42.84 Aligned_cols=114 Identities=15% Similarity=0.156 Sum_probs=70.8
Q ss_pred CCCCEEEEecCCCHHHHH----HHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEEcCCCh--
Q 025860 85 SAPDLIAFETIPNKIEAQ----AYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGINCTPP-- 158 (247)
Q Consensus 85 ~gvD~i~~ET~~~~~E~~----aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~NC~~p-- 158 (247)
.|+++++-|.++.-..+. .+++ +... +.|+++++... +-+.+.++++.+.+ .++++|-+||.+|
T Consensus 27 Gg~gli~te~~~~~~~~~~~~~~~~~-~~~~--~~p~~vQL~g~------~p~~~~~aA~~a~~-~G~D~IeIn~gcP~~ 96 (350)
T 3b0p_A 27 SLGVRLYTEMTVDQAVLRGNRERLLA-FRPE--EHPIALQLAGS------DPKSLAEAARIGEA-FGYDEINLNLGCPSE 96 (350)
T ss_dssp CSSSBEECCCEEHHHHHHSCHHHHHC-CCGG--GCSEEEEEECS------CHHHHHHHHHHHHH-TTCSEEEEEECCCSH
T ss_pred CCCCEEEeCCEEechhhcCCHHHHhc-cCCC--CCeEEEEeCCC------CHHHHHHHHHHHHH-cCCCEEEECCcCCCC
Confidence 567999999876322111 1222 2222 57999999621 12456777777766 5899999998533
Q ss_pred ---------------hHHHHHHHHHHhhcCCCEEEEeCCCCcccccccccccCCCCChHHHHHHHHHHHHcCCeEE
Q 025860 159 ---------------RFISGLILIIKKVTAKPILIYPNSGEFYDADRKEWVQNTGVSDEDFVSYVSKWCEVGASLV 219 (247)
Q Consensus 159 ---------------~~~~~~l~~l~~~~~~pl~vyPNaG~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~iI 219 (247)
+.+..+++.+++..+.|+++.-..|. +. + .+.+...++++.+.+.|+..|
T Consensus 97 ~~~~d~~G~~l~~~~~~~~eiv~av~~~v~~PV~vKiR~g~--~~----~-----~~~~~~~~~a~~l~~aG~d~I 161 (350)
T 3b0p_A 97 KAQEGGYGACLLLDLARVREILKAMGEAVRVPVTVKMRLGL--EG----K-----ETYRGLAQSVEAMAEAGVKVF 161 (350)
T ss_dssp HHHHTTCGGGGGGCHHHHHHHHHHHHHHCSSCEEEEEESCB--TT----C-----CCHHHHHHHHHHHHHTTCCEE
T ss_pred cCcCCCcchhHHhCHHHHHHHHHHHHHHhCCceEEEEecCc--Cc----c-----ccHHHHHHHHHHHHHcCCCEE
Confidence 45667778888777899988544332 11 1 123456667777777776654
No 45
>3lg3_A Isocitrate lyase; conserved, CD, proteomics evidence (cytopl periplasmic), drug target functions; 1.40A {Yersinia pestis} SCOP: c.1.12.7 PDB: 1igw_A
Probab=94.42 E-value=1.2 Score=40.93 Aligned_cols=134 Identities=13% Similarity=0.152 Sum_probs=88.9
Q ss_pred HHHHHHhcCCCCEEEEecCC---------------CHHHHHHHHHHH----HhhCCCCcEEEEEEEcCCC----------
Q 025860 77 RRVQVLVESAPDLIAFETIP---------------NKIEAQAYAELL----EEENIKIPAWFSFNSKDGV---------- 127 (247)
Q Consensus 77 ~q~~~l~~~gvD~i~~ET~~---------------~~~E~~aa~~~~----~~~~~~~pv~is~~~~~~~---------- 127 (247)
+-++.|.++||-.+-||-.. +.+|+..=++++ +.. +.+++|.--.+-..
T Consensus 171 ~tv~~~~~aGaaGi~IEDq~~~~KkCGh~~gk~lv~~~e~~~rI~Aa~~A~~~~--~~d~~IiARTDa~aa~l~~s~~d~ 248 (435)
T 3lg3_A 171 ELMKAMIEAGAAGVHFEDQLAAVKKCGHMGGKVLVPTQEAIQKLVAARLAADVL--GVPTLLIARTDADAADLLTSDCDP 248 (435)
T ss_dssp HHHHHHHHHTCSEEEEESBCGGGCBCSTTCBCEECCHHHHHHHHHHHHHHHHHH--TCCCEEEEEECTTTCCEESCCCCG
T ss_pred HHHHHHHHcCCEEEEEecCCCCccccCCCCCCeecCHHHHHHHHHHHHHHHHhc--CCCeEEEEEcCCcccccccccccc
Confidence 46788889999999999754 245544433333 333 34666555554311
Q ss_pred ---cccCC-----------CcHHHHHHHHHh-CCCCeEEEEcCC--ChhHHHHHHHHHHhhcCCCEEEEeCCCCcccccc
Q 025860 128 ---NVVSG-----------DSLLECASIAES-CKRVVSVGINCT--PPRFISGLILIIKKVTAKPILIYPNSGEFYDADR 190 (247)
Q Consensus 128 ---~l~~G-----------~~~~~~~~~~~~-~~~~~avG~NC~--~p~~~~~~l~~l~~~~~~pl~vyPNaG~~~d~~~ 190 (247)
....| ..++++++.... ..++|+|=+-.. +++.+..+.+.+.......+++|++...
T Consensus 249 rD~~fi~G~r~~eG~y~~~~gld~AI~Ra~AY~~GAD~if~E~~~~~~~ei~~f~~~v~~~~P~~~La~~~sPs------ 322 (435)
T 3lg3_A 249 YDREFITGDRTAEGFFRTRAGIEQAISRGLAYAPYADLVWCETSTPDLALAKRFADAVHAQFPGKLLAYNCSPS------ 322 (435)
T ss_dssp GGGGGEEEEECTTCCEEECCSHHHHHHHHHHHGGGCSEEEECCSSCCHHHHHHHHHHHHHHSTTCEEEEECCSS------
T ss_pred ccchhhcccccccccccccCCHHHHHHHHHHHHccCCEEEecCCCCCHHHHHHHHHHhccccCCeEEEeCCCCC------
Confidence 11122 568888887753 138999988553 6788888888887654556788876642
Q ss_pred cccccCCCCChHHHHHHHHHHHHcCCeEEe
Q 025860 191 KEWVQNTGVSDEDFVSYVSKWCEVGASLVG 220 (247)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~G~~iIG 220 (247)
-.|... ++++++..|..++.++|++++=
T Consensus 323 fnw~~~--~~d~~~~~f~~eLa~lG~~~v~ 350 (435)
T 3lg3_A 323 FNWKKN--LTDQQIASFQDELSAMGYKYQF 350 (435)
T ss_dssp SCHHHH--SCHHHHHHHHHHHHHTTEEEEE
T ss_pred cccccc--CCHHHHHHHHHHHHHcCCcEEE
Confidence 245432 6788999999999999988764
No 46
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=94.35 E-value=0.92 Score=39.40 Aligned_cols=103 Identities=17% Similarity=0.187 Sum_probs=69.8
Q ss_pred CCHHHHHHHHHHHHHHHhcCCCCEEEE-----ecC-CCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHH
Q 025860 66 ITVETLKDFHRRRVQVLVESAPDLIAF-----ETI-PNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECA 139 (247)
Q Consensus 66 ~s~~e~~~~~~~q~~~l~~~gvD~i~~-----ET~-~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~ 139 (247)
++.+.+++ +++.+++.|||.|++ |.. -+.+|-+.+++.+.+...+ |++.. .+.+..+++
T Consensus 17 iD~~~l~~----lv~~li~~Gv~gl~~~GttGE~~~Ls~eEr~~v~~~~~~~~~g--viaGv---------g~~~t~~ai 81 (293)
T 1w3i_A 17 IDKEKLKI----HAENLIRKGIDKLFVNGTTGLGPSLSPEEKLENLKAVYDVTNK--IIFQV---------GGLNLDDAI 81 (293)
T ss_dssp BCHHHHHH----HHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHTTCSC--EEEEC---------CCSCHHHHH
T ss_pred cCHHHHHH----HHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHcCC--EEEec---------CCCCHHHHH
Confidence 67666555 777788899998876 422 3467878888887765323 55444 345667777
Q ss_pred HHHHh--CCCCeEEEEcCC---C---hhHHHHHHHHHHhhcCCCEEEEeCCC
Q 025860 140 SIAES--CKRVVSVGINCT---P---PRFISGLILIIKKVTAKPILIYPNSG 183 (247)
Q Consensus 140 ~~~~~--~~~~~avG~NC~---~---p~~~~~~l~~l~~~~~~pl~vyPNaG 183 (247)
+..+. ..|++++.+-.- . .+.+..-.+.+.+..+.|+++|=+-+
T Consensus 82 ~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~~lPiilYn~P~ 133 (293)
T 1w3i_A 82 RLAKLSKDFDIVGIASYAPYYYPRMSEKHLVKYFKTLCEVSPHPVYLYNYPT 133 (293)
T ss_dssp HHHHHGGGSCCSEEEEECCCSCSSCCHHHHHHHHHHHHHHCSSCEEEEECHH
T ss_pred HHHHHHHhcCCCEEEEcCCCCCCCCCHHHHHHHHHHHHhhCCCCEEEEECch
Confidence 65542 368998887552 2 35566677777778899999998753
No 47
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=94.25 E-value=0.4 Score=42.89 Aligned_cols=102 Identities=10% Similarity=0.030 Sum_probs=69.7
Q ss_pred CCHHHHHHHHHHHHHHHhcCCCCEEEE-----ec-CCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHH
Q 025860 66 ITVETLKDFHRRRVQVLVESAPDLIAF-----ET-IPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECA 139 (247)
Q Consensus 66 ~s~~e~~~~~~~q~~~l~~~gvD~i~~-----ET-~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~ 139 (247)
++.+.+++ +++.+++.|||.|++ |. .-+.+|-+.+++. ...+ ++||++.. .+.+..+++
T Consensus 44 ID~~~l~~----lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~-~~~g-rvpViaGv---------g~~st~eai 108 (344)
T 2hmc_A 44 PDFDALVR----KGKELIADGMSAVVYCGSMGDWPLLTDEQRMEGVER-LVKA-GIPVIVGT---------GAVNTASAV 108 (344)
T ss_dssp BCHHHHHH----HHHHHHHTTCCCEEESSGGGTGGGSCHHHHHHHHHH-HHHT-TCCEEEEC---------CCSSHHHHH
T ss_pred cCHHHHHH----HHHHHHHcCCCEEEeCccCcChhhCCHHHHHHHHHH-HhCC-CCcEEEec---------CCCCHHHHH
Confidence 67666555 777888899999876 42 2346677777777 3233 78999877 345666666
Q ss_pred HHHHh--CCCCeEEEEcCC---C---hhHHHHHHHHHHh-hcCCCEEEEeCC
Q 025860 140 SIAES--CKRVVSVGINCT---P---PRFISGLILIIKK-VTAKPILIYPNS 182 (247)
Q Consensus 140 ~~~~~--~~~~~avG~NC~---~---p~~~~~~l~~l~~-~~~~pl~vyPNa 182 (247)
+..+. ..|++++.+-.- . .+.+..-.+.+.+ ..+.||++|=+-
T Consensus 109 ~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~IA~aa~~lPiilYn~P 160 (344)
T 2hmc_A 109 AHAVHAQKVGAKGLMVIPRVLSRGSVIAAQKAHFKAILSAAPEIPAVIYNSP 160 (344)
T ss_dssp HHHHHHHHHTCSEEEECCCCSSSTTCHHHHHHHHHHHHHHSTTSCEEEEEBG
T ss_pred HHHHHHHhcCCCEEEECCCccCCCCCHHHHHHHHHHHHhhCCCCcEEEEecC
Confidence 65532 258999888662 2 2556666777777 788999999765
No 48
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=93.96 E-value=0.44 Score=41.91 Aligned_cols=119 Identities=13% Similarity=0.144 Sum_probs=77.9
Q ss_pred eEEEEecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCEEEE-ecCC-----CHHHHHHHHHHHHhh-
Q 025860 39 ILVAASVGSYGAYLADGSEYSGNYGDAITVETLKDFHRRRVQVLVESAPDLIAF-ETIP-----NKIEAQAYAELLEEE- 111 (247)
Q Consensus 39 ~~VaGsiGP~g~~l~~g~eY~g~y~~~~s~~e~~~~~~~q~~~l~~~gvD~i~~-ET~~-----~~~E~~aa~~~~~~~- 111 (247)
-.+..-+-|+.. | | .++.+.++ .+++.+++.|||.|++ =|-. +.+|-+.+++.+.+.
T Consensus 10 Gv~~a~vTPf~~---d-----g----~iD~~~l~----~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~ 73 (311)
T 3h5d_A 10 KIITAFITPFHE---D-----G----SINFDAIP----ALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVV 73 (311)
T ss_dssp CEEEECCCCBCT---T-----S----SBCTTHHH----HHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHS
T ss_pred ceEEeeecCCCC---C-----C----CcCHHHHH----HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHh
Confidence 355566777742 1 1 14554444 4777888899997664 3322 467888888877664
Q ss_pred CCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHh--CCCC-eEEEEcCC-----ChhHHHHHHHHHHhhcCCCEEEEeCC
Q 025860 112 NIKIPAWFSFNSKDGVNVVSGDSLLECASIAES--CKRV-VSVGINCT-----PPRFISGLILIIKKVTAKPILIYPNS 182 (247)
Q Consensus 112 ~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~--~~~~-~avG~NC~-----~p~~~~~~l~~l~~~~~~pl~vyPNa 182 (247)
+.+.||++.. .+.+..++++..+. ..++ +++.+-.- +.+.+..-.+.+.+..+.|+++|=+-
T Consensus 74 ~grvpViaGv---------g~~~t~~ai~la~~A~~~Ga~davlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P 143 (311)
T 3h5d_A 74 NGRVPLIAGV---------GTNDTRDSIEFVKEVAEFGGFAAGLAIVPYYNKPSQEGMYQHFKAIADASDLPIIIYNIP 143 (311)
T ss_dssp CSSSCEEEEC---------CCSSHHHHHHHHHHHHHSCCCSEEEEECCCSSCCCHHHHHHHHHHHHHSCSSCEEEEECH
T ss_pred CCCCcEEEeC---------CCcCHHHHHHHHHHHHhcCCCcEEEEcCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEecc
Confidence 3368999876 34456666665432 2355 88877652 34667777788888889999999764
No 49
>1w1z_A Delta-aminolevulinic acid dehydratase; synthase, tetrapyrrole biosynthesis, ALAD, porphyrin biosynt heme biosynthesis, lyase; 2.6A {Prosthecochloris vibrioformis} SCOP: c.1.10.3 PDB: 2c1h_A*
Probab=93.96 E-value=2.7 Score=37.09 Aligned_cols=170 Identities=16% Similarity=0.196 Sum_probs=106.0
Q ss_pred CeEEEEe--cCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCC
Q 025860 38 PILVAAS--VGSYGAYLADGSEYSGNYGDAITVETLKDFHRRRVQVLVESAPDLIAFETIPNKIEAQAYAELLEEENIKI 115 (247)
Q Consensus 38 ~~~VaGs--iGP~g~~l~~g~eY~g~y~~~~s~~e~~~~~~~q~~~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~ 115 (247)
...|..+ +.||-..=++|--..| .+.-++-.+.+.+|+-...++|+|++.==-|.+-. +.++.+++.+.+..-
T Consensus 117 ~l~vitDvcLc~YT~HGHcGil~~g----~V~ND~Tl~~L~k~Als~A~AGADiVAPSdMMDGr-V~aIR~aLd~~G~~~ 191 (328)
T 1w1z_A 117 ELCIMTDVALDPFTPFGHDGLVKDG----IILNDETVEVLQKMAVSHAEAGADFVSPSDMMDGR-IGAIREALDETDHSD 191 (328)
T ss_dssp TSEEEEEECSTTTSTTSCSSEESSS----CEEHHHHHHHHHHHHHHHHHHTCSEEEECSCCTTH-HHHHHHHHHHTTCTT
T ss_pred CeEEEEeeecccCCCCCceeeccCC----cCccHHHHHHHHHHHHHHHHcCCCeEecccccccH-HHHHHHHHHhCCCCC
Confidence 3566665 4566554444321112 15667777788889888899999999966666543 567777777765332
Q ss_pred cEEEEEEEcC-------------------CC--c-ccCCCcHHHHHHHHH--hCCCCeEEEEcCCChhHHHHHHHHHHhh
Q 025860 116 PAWFSFNSKD-------------------GV--N-VVSGDSLLECASIAE--SCKRVVSVGINCTPPRFISGLILIIKKV 171 (247)
Q Consensus 116 pv~is~~~~~-------------------~~--~-l~~G~~~~~~~~~~~--~~~~~~avG~NC~~p~~~~~~l~~l~~~ 171 (247)
--++|.+.+- +. . +..+ +-.++++.+. -..|+|.|-|-=.-|. +.++..+++.
T Consensus 192 v~ImsYsaKyASafYGPFRdAa~Sap~fGDrktYQmdpa-N~~EAlrE~~~Di~EGAD~vMVKPal~Y--LDIir~vk~~ 268 (328)
T 1w1z_A 192 VGILSYAAKYASSFYGPFRDALHSAPQFGDKSTYQMNPA-NTEEAMKEVELDIVEGADIVMVKPGLAY--LDIVWRTKER 268 (328)
T ss_dssp SEEEEEEEEBCCTTCHHHHHHTTCCCCCSCSTTTSBCTT-CSHHHHHHHHHHHHHTCSEEEEESCGGG--HHHHHHHHHH
T ss_pred ceeeehhHHHhhhccchHHHHhccCCCCCCccccCCCCC-CHHHHHHHHHhhHHhCCCEEEEcCCCch--HHHHHHHHHh
Confidence 3444766441 11 1 2222 2233443332 1248999998876443 5678888888
Q ss_pred cCCCEEEEeCCCC---cccccccccccCCCCChHHHHHHHHHHHHcCCeEE
Q 025860 172 TAKPILIYPNSGE---FYDADRKEWVQNTGVSDEDFVSYVSKWCEVGASLV 219 (247)
Q Consensus 172 ~~~pl~vyPNaG~---~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~iI 219 (247)
.+.|+.+|--+|+ ......+.|... ..-+.+....++.+|+.+|
T Consensus 269 ~~~P~aaYqVSGEYAMikaAa~~GwiD~----~~~v~Esl~~~kRAGAd~I 315 (328)
T 1w1z_A 269 FDVPVAIYHVSGEYAMVKAAAAKGWIDE----DRVMMESLLCMKRAGADII 315 (328)
T ss_dssp HCSCEEEEECHHHHHHHHHHHHTTSSCH----HHHHHHHHHHHHHHTCSEE
T ss_pred cCCCEEEEEccHHHHHHHHHHHcCCccH----HHHHHHHHHHHHhcCCCEE
Confidence 8999999999996 222223567542 2346677788889999887
No 50
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=93.92 E-value=3.2 Score=36.75 Aligned_cols=136 Identities=17% Similarity=0.235 Sum_probs=84.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCCEEEEecC-C-----------------CHHHHHHHHHHHHhhCCCCcEEEEEEEcCC---
Q 025860 68 VETLKDFHRRRVQVLVESAPDLIAFETI-P-----------------NKIEAQAYAELLEEENIKIPAWFSFNSKDG--- 126 (247)
Q Consensus 68 ~~e~~~~~~~q~~~l~~~gvD~i~~ET~-~-----------------~~~E~~aa~~~~~~~~~~~pv~is~~~~~~--- 126 (247)
.+...++|.++++ .|+-+|+.|.. . .+...+.+.+++++.+ .++++++.=...
T Consensus 38 ~~~~~~~y~~rA~----gG~Glii~e~~~v~~~g~~~~~~~~i~~d~~i~~~~~~~~~vh~~G--~~i~~QL~H~Gr~~~ 111 (340)
T 3gr7_A 38 RTWHKIHYPARAV----GQVGLIIVEATGVTPQGRISERDLGIWSDDHIAGLRELVGLVKEHG--AAIGIQLAHAGRKSQ 111 (340)
T ss_dssp CHHHHHHHHHHHH----TTCSEEEEEEEESSGGGCSSTTSEECSSTTHHHHHHHHHHHHHHTT--CEEEEEEECCGGGCC
T ss_pred CHHHHHHHHHHhc----CCceEEEEcceEecccccCCCCCcccCCHHHHHHHHHHHHHHHhCC--CeEEEEeccCCCccC
Confidence 3788889998886 67888888732 1 2334566777777764 677777742110
Q ss_pred -------------------CcccCCCc-------HHHHHHHHHhCCCCeEEEEcCCC---------h-------------
Q 025860 127 -------------------VNVVSGDS-------LLECASIAESCKRVVSVGINCTP---------P------------- 158 (247)
Q Consensus 127 -------------------~~l~~G~~-------~~~~~~~~~~~~~~~avG~NC~~---------p------------- 158 (247)
.+-.+-+. +.++++.+.+ .|.|+|=|||.+ |
T Consensus 112 ~~~~~~~pS~~~~~~~~~~p~~mt~~eI~~ii~~f~~aA~~a~~-aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGsl 190 (340)
T 3gr7_A 112 VPGEIIAPSAVPFDDSSPTPKEMTKADIEETVQAFQNGARRAKE-AGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSP 190 (340)
T ss_dssp SSSCCEESSSCCSSTTSCCCEECCHHHHHHHHHHHHHHHHHHHH-HTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSH
T ss_pred CCCCccCCCCccccCCCCCCccCCHHHHHHHHHHHHHHHHHHHH-cCCCEEEEccccchHHHHcCCCccCcCCCcccCCH
Confidence 00011111 2233444444 589999999873 3
Q ss_pred ----hHHHHHHHHHHhhcCCCEEEEeCCCCcccccccccccCCCCChHHHHHHHHHHHHcCCeEE
Q 025860 159 ----RFISGLILIIKKVTAKPILIYPNSGEFYDADRKEWVQNTGVSDEDFVSYVSKWCEVGASLV 219 (247)
Q Consensus 159 ----~~~~~~l~~l~~~~~~pl~vyPNaG~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~iI 219 (247)
..+.++++.+++..+.||++.-+.....+. . .+.+++.+.++.+.+.|+.+|
T Consensus 191 enR~r~~~eiv~avr~~v~~pv~vRls~~~~~~~---g------~~~~~~~~la~~L~~~Gvd~i 246 (340)
T 3gr7_A 191 ENRYRFLGEVIDAVREVWDGPLFVRISASDYHPD---G------LTAKDYVPYAKRMKEQGVDLV 246 (340)
T ss_dssp HHHHHHHHHHHHHHHHHCCSCEEEEEESCCCSTT---S------CCGGGHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHHHHHHHHhcCCceEEEeccccccCC---C------CCHHHHHHHHHHHHHcCCCEE
Confidence 235677778888789999998877532111 1 234567777788888887765
No 51
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=93.87 E-value=1.7 Score=40.38 Aligned_cols=100 Identities=13% Similarity=0.087 Sum_probs=70.0
Q ss_pred HHHHHhcCCCCEEE-EecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEEcCC
Q 025860 78 RVQVLVESAPDLIA-FETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGINCT 156 (247)
Q Consensus 78 q~~~l~~~gvD~i~-~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~NC~ 156 (247)
.++.+.++|+|.|- |-..++++.++.+++.+++.+ ..+.+++++.+.... +=+-+.+.++.+.+ .|++.|.+-=+
T Consensus 105 ~v~~a~~~Gvd~i~if~~~sd~~ni~~~i~~ak~~G--~~v~~~i~~~~~~~~-~~e~~~~~a~~l~~-~Gad~I~l~DT 180 (464)
T 2nx9_A 105 FVERAVKNGMDVFRVFDAMNDVRNMQQALQAVKKMG--AHAQGTLCYTTSPVH-NLQTWVDVAQQLAE-LGVDSIALKDM 180 (464)
T ss_dssp HHHHHHHTTCCEEEECCTTCCTHHHHHHHHHHHHTT--CEEEEEEECCCCTTC-CHHHHHHHHHHHHH-TTCSEEEEEET
T ss_pred HHHHHHhCCcCEEEEEEecCHHHHHHHHHHHHHHCC--CEEEEEEEeeeCCCC-CHHHHHHHHHHHHH-CCCCEEEEcCC
Confidence 44556679999874 556778888888999999875 566666655443321 22233455555666 58998888532
Q ss_pred ----ChhHHHHHHHHHHhhcCCCEEEEeC
Q 025860 157 ----PPRFISGLILIIKKVTAKPILIYPN 181 (247)
Q Consensus 157 ----~p~~~~~~l~~l~~~~~~pl~vyPN 181 (247)
.|..+..+++.+++..+.||.+...
T Consensus 181 ~G~~~P~~v~~lv~~l~~~~~~~i~~H~H 209 (464)
T 2nx9_A 181 AGILTPYAAEELVSTLKKQVDVELHLHCH 209 (464)
T ss_dssp TSCCCHHHHHHHHHHHHHHCCSCEEEEEC
T ss_pred CCCcCHHHHHHHHHHHHHhcCCeEEEEEC
Confidence 4999999999998888888887763
No 52
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=93.85 E-value=2.8 Score=35.77 Aligned_cols=149 Identities=17% Similarity=0.172 Sum_probs=87.2
Q ss_pred CHHHHHHHHHHHHHHHhcCCCCEE-----EEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcC-CCcccCCCc--HHHH
Q 025860 67 TVETLKDFHRRRVQVLVESAPDLI-----AFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKD-GVNVVSGDS--LLEC 138 (247)
Q Consensus 67 s~~e~~~~~~~q~~~l~~~gvD~i-----~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~-~~~l~~G~~--~~~~ 138 (247)
+.+++.+ +++.+.+.|+|++ +++.+++..++...+..+++.-.++|+++++-... +|.. .+.. -.+.
T Consensus 30 t~~e~l~----~a~~~~~~~aD~vElR~D~l~~~~~~~~v~~~l~~lr~~~~~lPiI~T~Rt~~EGG~~-~~~~~~~~~l 104 (258)
T 4h3d_A 30 NKKDIIK----EAKELKDACLDIIEWRVDFFENVENIKEVKEVLYELRSYIHDIPLLFTFRSVVEGGEK-LISRDYYTTL 104 (258)
T ss_dssp SHHHHHH----HHHHHTTSSCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHCTTSCEEEECCCGGGTCSC-CCCHHHHHHH
T ss_pred CHHHHHH----HHHHHhhcCCCEEEEeeccccccCCHHHHHHHHHHHHHhcCCCCEEEEEechhhCCCC-CCCHHHHHHH
Confidence 5566655 6666777899998 77888899999999988887644799999886543 3432 2221 2223
Q ss_pred HHHHHhCCCCeEEEEcCC-ChhHHHHHHHHHHhhcCCCEEEEeCCCCcccccccccccCCCCChHHHHHHHHHHHHcCCe
Q 025860 139 ASIAESCKRVVSVGINCT-PPRFISGLILIIKKVTAKPILIYPNSGEFYDADRKEWVQNTGVSDEDFVSYVSKWCEVGAS 217 (247)
Q Consensus 139 ~~~~~~~~~~~avG~NC~-~p~~~~~~l~~l~~~~~~pl~vyPNaG~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 217 (247)
...+.....++.|=+-=. ..+....+++..++ .+..+++-=. .|.. ..+.+++.+...+..+.|+.
T Consensus 105 l~~~~~~~~~d~iDvEl~~~~~~~~~l~~~a~~-~~~kiI~S~H----------df~~--TP~~~el~~~~~~~~~~gaD 171 (258)
T 4h3d_A 105 NKEISNTGLVDLIDVELFMGDEVIDEVVNFAHK-KEVKVIISNH----------DFNK--TPKKEEIVSRLCRMQELGAD 171 (258)
T ss_dssp HHHHHHTTCCSEEEEEGGGCHHHHHHHHHHHHH-TTCEEEEEEE----------ESSC--CCCHHHHHHHHHHHHHTTCS
T ss_pred HHHHHhcCCchhhHHhhhccHHHHHHHHHHHHh-CCCEEEEEEe----------cCCC--CCCHHHHHHHHHHHHHhCCC
Confidence 333333334778777765 34445555554443 2333332111 1110 01235677777778888877
Q ss_pred EEeecCC-CChHHHHHH
Q 025860 218 LVGGCCR-TTPNTIKGI 233 (247)
Q Consensus 218 iIGGCCG-t~P~hI~al 233 (247)
|+==++- .++++.-.|
T Consensus 172 IvKia~~~~~~~D~l~L 188 (258)
T 4h3d_A 172 LPKIAVMPQNEKDVLVL 188 (258)
T ss_dssp EEEEEECCSSHHHHHHH
T ss_pred EEEEEEccCCHHHHHHH
Confidence 7543332 355554444
No 53
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=93.65 E-value=1 Score=38.86 Aligned_cols=100 Identities=10% Similarity=0.022 Sum_probs=64.6
Q ss_pred HHHHHHhcCCCCEEEEec-CC--------------CHHHHHHHHHHHHhhCCCCcEE--EEE--EEcCCCcccCCCcHHH
Q 025860 77 RRVQVLVESAPDLIAFET-IP--------------NKIEAQAYAELLEEENIKIPAW--FSF--NSKDGVNVVSGDSLLE 137 (247)
Q Consensus 77 ~q~~~l~~~gvD~i~~ET-~~--------------~~~E~~aa~~~~~~~~~~~pv~--is~--~~~~~~~l~~G~~~~~ 137 (247)
+.++.++++|+|.+-+=. .+ +++.++.+++.+++.+ ++|- +++ .+.+..+ .+++.
T Consensus 83 ~~i~~a~~~G~~~V~i~~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G--~~V~~~l~~~~~~e~~~~----~~~~~ 156 (295)
T 1ydn_A 83 KGYEAAAAAHADEIAVFISASEGFSKANINCTIAESIERLSPVIGAAINDG--LAIRGYVSCVVECPYDGP----VTPQA 156 (295)
T ss_dssp HHHHHHHHTTCSEEEEEEESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTT--CEEEEEEECSSEETTTEE----CCHHH
T ss_pred HHHHHHHHCCCCEEEEEEecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcC--CeEEEEEEEEecCCcCCC----CCHHH
Confidence 345667789999887753 23 4555666778888874 5555 442 2333322 34454
Q ss_pred HHHH---HHhCCCCeEEEEcC----CChhHHHHHHHHHHhhcC-CCEEEEe--CCC
Q 025860 138 CASI---AESCKRVVSVGINC----TPPRFISGLILIIKKVTA-KPILIYP--NSG 183 (247)
Q Consensus 138 ~~~~---~~~~~~~~avG~NC----~~p~~~~~~l~~l~~~~~-~pl~vyP--NaG 183 (247)
+.+. +.+ .|++.|.+.= ..|+.+..+++.+++..+ .||.+.. +.|
T Consensus 157 ~~~~~~~~~~-~G~d~i~l~Dt~G~~~P~~~~~lv~~l~~~~~~~~l~~H~Hn~~G 211 (295)
T 1ydn_A 157 VASVTEQLFS-LGCHEVSLGDTIGRGTPDTVAAMLDAVLAIAPAHSLAGHYHDTGG 211 (295)
T ss_dssp HHHHHHHHHH-HTCSEEEEEETTSCCCHHHHHHHHHHHHTTSCGGGEEEEEBCTTS
T ss_pred HHHHHHHHHh-cCCCEEEecCCCCCcCHHHHHHHHHHHHHhCCCCeEEEEECCCcc
Confidence 4444 445 4788776652 249999999999988776 7888887 444
No 54
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=93.28 E-value=0.96 Score=40.76 Aligned_cols=66 Identities=12% Similarity=0.064 Sum_probs=44.6
Q ss_pred HHHHHHHhcCCCCEEEEecCC-CHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEE
Q 025860 76 RRRVQVLVESAPDLIAFETIP-NKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGI 153 (247)
Q Consensus 76 ~~q~~~l~~~gvD~i~~ET~~-~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~ 153 (247)
.++++.++++|+|+|.+.|-. +..+....++.+++..++.|+++.. ..+.+++... .+ .++++|.+
T Consensus 110 ~~~~~~lieaGvd~I~idta~G~~~~~~~~I~~ik~~~p~v~Vi~G~----------v~t~e~A~~a-~~-aGAD~I~v 176 (366)
T 4fo4_A 110 EERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAAYPHLEIIGGN----------VATAEGARAL-IE-AGVSAVKV 176 (366)
T ss_dssp HHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTCEEEEEE----------ECSHHHHHHH-HH-HTCSEEEE
T ss_pred HHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHHHhcCCCceEeee----------eCCHHHHHHH-HH-cCCCEEEE
Confidence 457888999999999998753 3455556666677654467887642 2355555554 44 47898888
No 55
>3obk_A Delta-aminolevulinic acid dehydratase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, lyase; HET: PBG; 2.50A {Toxoplasma gondii ME49}
Probab=93.27 E-value=4.3 Score=36.15 Aligned_cols=174 Identities=17% Similarity=0.217 Sum_probs=106.8
Q ss_pred CeEEEEec--CCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCC
Q 025860 38 PILVAASV--GSYGAYLADGSEYSGNYGDAITVETLKDFHRRRVQVLVESAPDLIAFETIPNKIEAQAYAELLEEENIKI 115 (247)
Q Consensus 38 ~~~VaGsi--GP~g~~l~~g~eY~g~y~~~~s~~e~~~~~~~q~~~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~ 115 (247)
...|..++ .||-..=++|--... ...+.-++-.+.+.+|+-...++|+|++.==-|.+-. +.++.+++.+.+..-
T Consensus 128 ~l~VitDVcLc~YT~HGHcGil~~~--~g~V~ND~Tl~~Lak~Als~A~AGADiVAPSdMMDGr-V~aIR~aLd~~G~~~ 204 (356)
T 3obk_A 128 DVLLLADVALDPYSSMGHDGVVDEQ--SGKIVNDLTVHQLCKQAITLARAGADMVCPSDMMDGR-VSAIRESLDMEGCTD 204 (356)
T ss_dssp TCEEEEEECSGGGBTTCCSSCBCTT--TCCBCHHHHHHHHHHHHHHHHHHTCSEEEECSCCTTH-HHHHHHHHHHTTCTT
T ss_pred CCEEEEeeccccccCCCcceeeeCC--CCCCCCHHHHHHHHHHHHHHHHcCCCeEeccccccCH-HHHHHHHHHHCCCCC
Confidence 46677764 466554344321110 0126678888888889988999999999966666543 566777777654322
Q ss_pred cEEEEEEEcC--------------C----C----cccCCCcHHHHHHHHH--hCCCCeEEEEcCCChhHHHHHHHHHHhh
Q 025860 116 PAWFSFNSKD--------------G----V----NVVSGDSLLECASIAE--SCKRVVSVGINCTPPRFISGLILIIKKV 171 (247)
Q Consensus 116 pv~is~~~~~--------------~----~----~l~~G~~~~~~~~~~~--~~~~~~avG~NC~~p~~~~~~l~~l~~~ 171 (247)
--++|.+.+- . + ...+--.-.++++.+. -..|+|.|-|-=.-|. +.++..+++.
T Consensus 205 v~IMsYsaKyASafYGPFRdAa~Sa~p~~GDRktYQmdpaN~~EAlrE~~lDi~EGAD~vMVKPal~Y--LDIi~~vk~~ 282 (356)
T 3obk_A 205 TSILAYSCKYASSFYGPFRDALDSHMVGGTDKKTYQMDPSNSREAEREAEADASEGADMLMVKPGLPY--LDVLAKIREK 282 (356)
T ss_dssp SEEEEEEEEBCCSTTHHHHHHHTCCCSTTCCSTTTSBCTTCSHHHHHHHHHHHHTTCSEEEEESSGGG--HHHHHHHHHH
T ss_pred cceehhHHHHhhhccchhhHHhcCCCCCCCCccccCCCCCCHHHHHHHHHhhHhcCCCEEEecCCCcH--HHHHHHHHhc
Confidence 3444766431 1 0 0111122233444332 1358999998876443 5678888888
Q ss_pred cCCCEEEEeCCCC---cccccccccccCCCCChHHHHHHHHHHHHcCCeEEe
Q 025860 172 TAKPILIYPNSGE---FYDADRKEWVQNTGVSDEDFVSYVSKWCEVGASLVG 220 (247)
Q Consensus 172 ~~~pl~vyPNaG~---~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~iIG 220 (247)
.+.|+.+|--+|+ ......+.|... ..-+.+....++.+|+.+|=
T Consensus 283 ~~~PvaaYqVSGEYAMikAAa~~GwiD~----~~~v~Esl~~~kRAGAd~Ii 330 (356)
T 3obk_A 283 SKLPMVAYHVSGEYAMLKAAAEKGYISE----KDTVLEVLKSFRRAGADAVA 330 (356)
T ss_dssp CSSCEEEEECHHHHHHHHHHHHHTSSCH----HHHHHHHHHHHHHHTCSEEE
T ss_pred CCCCEEEEEccHHHHHHHHHHHcCCccH----HHHHHHHHHHHHHcCCCEEe
Confidence 8999999999996 122223567542 23466777788888988874
No 56
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=93.21 E-value=0.81 Score=41.19 Aligned_cols=117 Identities=15% Similarity=0.083 Sum_probs=74.1
Q ss_pred EEEEecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCEEEE-----ecCC-CHHHHHHHHHHHHh-hC
Q 025860 40 LVAASVGSYGAYLADGSEYSGNYGDAITVETLKDFHRRRVQVLVESAPDLIAF-----ETIP-NKIEAQAYAELLEE-EN 112 (247)
Q Consensus 40 ~VaGsiGP~g~~l~~g~eY~g~y~~~~s~~e~~~~~~~q~~~l~~~gvD~i~~-----ET~~-~~~E~~aa~~~~~~-~~ 112 (247)
.+..-+-|+.. | | .++.+.+++ .++.+++.|||.|++ |... +.+|=+.+++.+.+ .+
T Consensus 63 i~~alvTPF~~---d-----g----~ID~~al~~----lv~~li~~Gv~Gl~v~GTTGE~~~Ls~eEr~~vi~~~ve~~~ 126 (360)
T 4dpp_A 63 VITAIKTPYLP---D-----G----RFDLEAYDD----LVNIQIQNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFG 126 (360)
T ss_dssp EEEECCCCBCT---T-----S----SBCHHHHHH----HHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT
T ss_pred eEEEEeCcCCC---C-----C----CcCHHHHHH----HHHHHHHcCCCEEEecccccChhhCCHHHHHHHHHHHHHHhC
Confidence 55666777742 1 1 266655544 777888899999887 5222 46677777776554 33
Q ss_pred CCCcEEEEEEEcCCCcccCCCcHHHHHHHHHh--CCCCeEEEEcCC-----ChhHHHHHHHHHHhhcCCCEEEEeCCC
Q 025860 113 IKIPAWFSFNSKDGVNVVSGDSLLECASIAES--CKRVVSVGINCT-----PPRFISGLILIIKKVTAKPILIYPNSG 183 (247)
Q Consensus 113 ~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~--~~~~~avG~NC~-----~p~~~~~~l~~l~~~~~~pl~vyPNaG 183 (247)
.++||++.. .+.+..++++..+. ..|++++.+-.- +.+.+..-.+.+.+. .|+++|=+-+
T Consensus 127 grvpViaGv---------g~~st~eai~la~~A~~~Gadavlvv~PyY~k~sq~gl~~hf~~IA~a--~PiilYNiP~ 193 (360)
T 4dpp_A 127 GSIKVIGNT---------GSNSTREAIHATEQGFAVGMHAALHINPYYGKTSIEGLIAHFQSVLHM--GPTIIYNVPG 193 (360)
T ss_dssp TTSEEEEEC---------CCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHTTGGG--SCEEEEECHH
T ss_pred CCCeEEEec---------CCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHh--CCEEEEeCCc
Confidence 368999876 24466777665432 258898887652 234555555555543 6999997643
No 57
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=93.10 E-value=1.9 Score=41.37 Aligned_cols=135 Identities=16% Similarity=0.181 Sum_probs=84.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCCEEEEecCC-C-----------------HHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcc
Q 025860 68 VETLKDFHRRRVQVLVESAPDLIAFETIP-N-----------------KIEAQAYAELLEEENIKIPAWFSFNSKDGVNV 129 (247)
Q Consensus 68 ~~e~~~~~~~q~~~l~~~gvD~i~~ET~~-~-----------------~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l 129 (247)
.+.+.++|+++++ .|+.+|+.|... + +...+.+.+++++. +.++++++.=. |+.
T Consensus 36 ~~~~~~~y~~ra~----gg~gliite~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vh~~--g~~i~~Ql~h~--Gr~ 107 (671)
T 1ps9_A 36 AERLAAFYAERAR----HGVALIVSGGIAPDLTGVGMEGGAMLNDASQIPHHRTITEAVHQE--GGKIALQILHT--GRY 107 (671)
T ss_dssp HHHHHHHHHHHHH----TTCSEEEEEEEBSSSTTCSBTTCCBCCSGGGHHHHHHHHHHHHHT--TCCEEEEECCC--GGG
T ss_pred cHHHHHHHHHHhc----CCCCEEEecccccCccccCCCCCCccCCHHHHHHHHHHHHHHHhc--CCEEEEEeccC--Ccc
Confidence 4778888888874 789999999643 1 22345566667766 46888888521 110
Q ss_pred -----------------------cCC-------CcHHHHHHHHHhCCCCeEEEEcCCC---------h------------
Q 025860 130 -----------------------VSG-------DSLLECASIAESCKRVVSVGINCTP---------P------------ 158 (247)
Q Consensus 130 -----------------------~~G-------~~~~~~~~~~~~~~~~~avG~NC~~---------p------------ 158 (247)
.+- +.+.++++.+.+ .|.|+|=+|+.+ |
T Consensus 108 ~~~~~~~~ps~~~~~~~~~~p~~~t~~ei~~~i~~~~~aA~~a~~-aGfd~veih~~~gyl~~qFlsp~~n~r~d~yGgs 186 (671)
T 1ps9_A 108 SYQPHLVAPSALQAPINRFVPHELSHEEILQLIDNFARCAQLARE-AGYDGVEVMGSEGYLINEFLTLRTNQRSDQWGGD 186 (671)
T ss_dssp SBSTTCEESSSCCCTTCSSCCEECCHHHHHHHHHHHHHHHHHHHH-TTCSEEEEEECBTSHHHHHHCTTTCCCCSTTSSS
T ss_pred cCCCCCcCCCCcccccCCCCCccCCHHHHHHHHHHHHHHHHHHHH-cCCCEEEEccccchHHHHhCCCccCCCcCcCCCc
Confidence 000 134455555555 589999999863 2
Q ss_pred -----hHHHHHHHHHHhhc--CCCEEEEeCCCCcccccccccccCCCCChHHHHHHHHHHHHcCCeEEe
Q 025860 159 -----RFISGLILIIKKVT--AKPILIYPNSGEFYDADRKEWVQNTGVSDEDFVSYVSKWCEVGASLVG 220 (247)
Q Consensus 159 -----~~~~~~l~~l~~~~--~~pl~vyPNaG~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~iIG 220 (247)
..+.++++.+++.. +.|+++.-+.....+ . ..+.+++.+.++.+.+.|+.+|.
T Consensus 187 ~~~r~r~~~eiv~avr~~vG~~~~v~vrls~~~~~~---~------g~~~~~~~~~a~~l~~~g~d~i~ 246 (671)
T 1ps9_A 187 YRNRMRFAVEVVRAVRERVGNDFIIIYRLSMLDLVE---D------GGTFAETVELAQAIEAAGATIIN 246 (671)
T ss_dssp HHHHHHHHHHHHHHHHHHHCSSSEEEEEEEEECCST---T------CCCHHHHHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHHHHHHHHHHHcCCCceEEEEECccccCC---C------CCCHHHHHHHHHHHHhcCCCEEE
Confidence 23566667777765 788887666532111 0 13466777788888888888874
No 58
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=93.07 E-value=0.63 Score=41.82 Aligned_cols=140 Identities=15% Similarity=0.166 Sum_probs=87.1
Q ss_pred HHHHHHHhcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEEcC
Q 025860 76 RRRVQVLVESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGINC 155 (247)
Q Consensus 76 ~~q~~~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~NC 155 (247)
..|+..|.++|+|++=+ |+|+.++++++ ..+++.. ++|+++-+.|+. ..+...++ .+++.+=+|=
T Consensus 49 v~Qi~~l~~aG~diVRv-avp~~~~a~al-~~I~~~~-~vPlvaDiHf~~----------~lal~a~e--~G~dklRINP 113 (366)
T 3noy_A 49 LNQIKRLYEAGCEIVRV-AVPHKEDVEAL-EEIVKKS-PMPVIADIHFAP----------SYAFLSME--KGVHGIRINP 113 (366)
T ss_dssp HHHHHHHHHTTCCEEEE-ECCSHHHHHHH-HHHHHHC-SSCEEEECCSCH----------HHHHHHHH--TTCSEEEECH
T ss_pred HHHHHHHHHcCCCEEEe-CCCChHHHHHH-HHHHhcC-CCCEEEeCCCCH----------HHHHHHHH--hCCCeEEECC
Confidence 34999999999999986 88997776554 4455543 699998887632 22333333 4788888987
Q ss_pred C---ChhHHHHHHHHHHhhcCCCEEEEeCCCCcccccccccccCCCCChHHHHHHHHHH----HHcCC-eEEeecCCCCh
Q 025860 156 T---PPRFISGLILIIKKVTAKPILIYPNSGEFYDADRKEWVQNTGVSDEDFVSYVSKW----CEVGA-SLVGGCCRTTP 227 (247)
Q Consensus 156 ~---~p~~~~~~l~~l~~~~~~pl~vyPNaG~~~d~~~~~~~~~~~~~~~~~~~~~~~~----~~~G~-~iIGGCCGt~P 227 (247)
. +.+.+..+++..+++ ++|+-+=-|+|.+...--..|-. .+|+.+.+.+.++ .+.|. +|+=-|=.+.+
T Consensus 114 GNig~~~~~~~vv~~ak~~-~~piRIGvN~GSL~~~ll~~yg~---~~~eamVeSAl~~~~~~e~~gf~~iviS~K~S~v 189 (366)
T 3noy_A 114 GNIGKEEIVREIVEEAKRR-GVAVRIGVNSGSLEKDLLEKYGY---PSAEALAESALRWSEKFEKWGFTNYKVSIKGSDV 189 (366)
T ss_dssp HHHSCHHHHHHHHHHHHHH-TCEEEEEEEGGGCCHHHHHHHSS---CCHHHHHHHHHHHHHHHHHTTCCCEEEEEECSSH
T ss_pred cccCchhHHHHHHHHHHHc-CCCEEEecCCcCCCHHHHHhcCC---CCHHHHHHHHHHHHHHHHhCCCCeEEEeeecCCh
Confidence 4 356667777766654 88988888999653221112321 3467666655443 34564 55544544544
Q ss_pred H-HHHHHH
Q 025860 228 N-TIKGIY 234 (247)
Q Consensus 228 ~-hI~al~ 234 (247)
. -|++-+
T Consensus 190 ~~~i~ayr 197 (366)
T 3noy_A 190 LQNVRANL 197 (366)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 3 444433
No 59
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=92.98 E-value=2.4 Score=36.68 Aligned_cols=138 Identities=10% Similarity=-0.036 Sum_probs=81.6
Q ss_pred HHHHHHHHHHhcCCCC-EEEEec-----------CCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHH
Q 025860 73 DFHRRRVQVLVESAPD-LIAFET-----------IPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECAS 140 (247)
Q Consensus 73 ~~~~~q~~~l~~~gvD-~i~~ET-----------~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~ 140 (247)
+.|.+.++.+.++|+| +|-+-- ..+.+.+..+++.+++.. ++|+++-++.. + +-+.+.+.++
T Consensus 106 ~~~~~~a~~~~~~g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~vr~~~-~~Pv~vKi~~~----~-~~~~~~~~a~ 179 (311)
T 1jub_A 106 AENIAMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFTFF-TKPLGVKLPPY----F-DLVHFDIMAE 179 (311)
T ss_dssp HHHHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTTTC-CSCEEEEECCC----C-SHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHHHHhc-CCCEEEEECCC----C-CHHHHHHHHH
Confidence 3466677788889999 887632 126667777888888754 68998876421 1 1123445566
Q ss_pred HHHhCCCCeEEEEcCC--------------------------Ch---hHHHHHHHHHHhhc--CCCEEEEeCCCCccccc
Q 025860 141 IAESCKRVVSVGINCT--------------------------PP---RFISGLILIIKKVT--AKPILIYPNSGEFYDAD 189 (247)
Q Consensus 141 ~~~~~~~~~avG~NC~--------------------------~p---~~~~~~l~~l~~~~--~~pl~vyPNaG~~~d~~ 189 (247)
.+.+ .++++|-+-.+ ++ ......++.+++.. +.|| ..|+|.
T Consensus 180 ~~~~-~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~~~~i~~v~~~~~~~ipv--i~~GGI----- 251 (311)
T 1jub_A 180 ILNQ-FPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVRAFYTRLKPEIQI--IGTGGI----- 251 (311)
T ss_dssp HHTT-SCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHHHHHHHHHTTSCTTSEE--EEESSC-----
T ss_pred HHHH-cCCcEEEecCCCCcCceeccCCCCcccccCCCCCccccccccHHHHHHHHHHHHhcCCCCCE--EEECCC-----
Confidence 6665 57887644221 11 12346677777766 5664 344543
Q ss_pred ccccccCCCCChHHHHHHHHHHHHcCCeEEeecCC---CChHHHHHHHHHh
Q 025860 190 RKEWVQNTGVSDEDFVSYVSKWCEVGASLVGGCCR---TTPNTIKGIYRTL 237 (247)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~iIGGCCG---t~P~hI~al~~~l 237 (247)
.++++..+ ++..|++.|+=+-+ -+|..++.|.+.+
T Consensus 252 ---------~~~~da~~----~l~~GAd~V~vg~~~l~~~p~~~~~i~~~l 289 (311)
T 1jub_A 252 ---------ETGQDAFE----HLLCGATMLQIGTALHKEGPAIFDRIIKEL 289 (311)
T ss_dssp ---------CSHHHHHH----HHHHTCSEEEECHHHHHHCTHHHHHHHHHH
T ss_pred ---------CCHHHHHH----HHHcCCCEEEEchHHHhcCcHHHHHHHHHH
Confidence 12443333 44568888864444 3788787776554
No 60
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=92.92 E-value=0.45 Score=41.75 Aligned_cols=91 Identities=19% Similarity=0.144 Sum_probs=59.2
Q ss_pred cCCCCEEEEecCCCHHHHH---HHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEEcCCCh--
Q 025860 84 ESAPDLIAFETIPNKIEAQ---AYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGINCTPP-- 158 (247)
Q Consensus 84 ~~gvD~i~~ET~~~~~E~~---aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~NC~~p-- 158 (247)
+.|+++++-|.+..-.... ...+.+ ....+.|+++++.-. +-+.+.++++.+.+ . +++|-+||.+|
T Consensus 26 ~~G~gli~te~~~~~~~~~~~~~~~~~l-~~~~~~~~~~QL~g~------~~~~~~~aa~~a~~-~-~d~Iein~gcP~~ 96 (318)
T 1vhn_A 26 EWGADFAFSEMVSAKGFLMNSQKTEELL-PQPHERNVAVQIFGS------EPNELSEAARILSE-K-YKWIDLNAGCPVR 96 (318)
T ss_dssp TTTCCCEECSCEEHHHHHTTCHHHHHHS-CCTTCTTEEEEEECS------CHHHHHHHHHHHTT-T-CSEEEEEECCCCH
T ss_pred HHCcCEEEeCCEEEcccccCCHhHHHhh-hCcCCCeEEEEeCCC------CHHHHHHHHHHHHH-h-CCEEEEECCCCcH
Confidence 4689999999765322111 112222 122368999999621 22456677776665 5 99999998644
Q ss_pred ---------------hHHHHHHHHHHhhcCCCEEEEeCCC
Q 025860 159 ---------------RFISGLILIIKKVTAKPILIYPNSG 183 (247)
Q Consensus 159 ---------------~~~~~~l~~l~~~~~~pl~vyPNaG 183 (247)
+.+..+++.+++..+.|+++.-..|
T Consensus 97 ~~r~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~G 136 (318)
T 1vhn_A 97 KVVKEGAGGALLKDLRHFRYIVRELRKSVSGKFSVKTRLG 136 (318)
T ss_dssp HHHHTTCGGGGGSCHHHHHHHHHHHHHHCSSEEEEEEESC
T ss_pred hcCCCCcccchhhCHHHHHHHHHHHHHhhCCCEEEEecCC
Confidence 3456677888887889999887765
No 61
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=92.74 E-value=2.6 Score=39.88 Aligned_cols=100 Identities=12% Similarity=0.036 Sum_probs=68.3
Q ss_pred HHHHHhcCCCCEE-EEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEEcC-
Q 025860 78 RVQVLVESAPDLI-AFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGINC- 155 (247)
Q Consensus 78 q~~~l~~~gvD~i-~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~NC- 155 (247)
-++.+.++|+|.| +|-..++++.++.+++.+++.+ ..+-.+|++.+.... +=+-+.+.++.+.+ .|++.|.+-=
T Consensus 122 ~ve~a~~aGvd~vrIf~s~sd~~ni~~~i~~ak~~G--~~v~~~i~~~~~~~~-~~e~~~~~a~~l~~-~Gad~I~L~DT 197 (539)
T 1rqb_A 122 FVDKSAENGMDVFRVFDAMNDPRNMAHAMAAVKKAG--KHAQGTICYTISPVH-TVEGYVKLAGQLLD-MGADSIALKDM 197 (539)
T ss_dssp HHHHHHHTTCCEEEECCTTCCTHHHHHHHHHHHHTT--CEEEEEEECCCSTTC-CHHHHHHHHHHHHH-TTCSEEEEEET
T ss_pred HHHHHHhCCCCEEEEEEehhHHHHHHHHHHHHHHCC--CeEEEEEEeeeCCCC-CHHHHHHHHHHHHH-cCCCEEEeCCC
Confidence 4455677999987 4556777888888899998875 556555654433221 11233445555555 5889888753
Q ss_pred ---CChhHHHHHHHHHHhhc--CCCEEEEeC
Q 025860 156 ---TPPRFISGLILIIKKVT--AKPILIYPN 181 (247)
Q Consensus 156 ---~~p~~~~~~l~~l~~~~--~~pl~vyPN 181 (247)
..|..+..+++.+++.. +.||.+...
T Consensus 198 ~G~~~P~~v~~lv~~l~~~~p~~i~I~~H~H 228 (539)
T 1rqb_A 198 AALLKPQPAYDIIKAIKDTYGQKTQINLHCH 228 (539)
T ss_dssp TCCCCHHHHHHHHHHHHHHHCTTCCEEEEEB
T ss_pred CCCcCHHHHHHHHHHHHHhcCCCceEEEEeC
Confidence 24999999999998876 688887764
No 62
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=92.66 E-value=1.2 Score=39.94 Aligned_cols=80 Identities=14% Similarity=0.085 Sum_probs=54.6
Q ss_pred CCcEEEEEEEcCCCcccCCCcHHH---HHHHHHh--CCCCeEEEEcCCC------------hhHHHHHHHHHHhhcCCCE
Q 025860 114 KIPAWFSFNSKDGVNVVSGDSLLE---CASIAES--CKRVVSVGINCTP------------PRFISGLILIIKKVTAKPI 176 (247)
Q Consensus 114 ~~pv~is~~~~~~~~l~~G~~~~~---~~~~~~~--~~~~~avG~NC~~------------p~~~~~~l~~l~~~~~~pl 176 (247)
+.|+++|+. |.++++ +++.+.. ..++++|=+|+++ |+.+.++++.+++..++||
T Consensus 126 ~~pvivsI~---------G~~~~d~~~~a~~l~~~~~~g~d~ielNisCPn~~gg~~l~~~~e~~~~il~av~~~~~~PV 196 (354)
T 4ef8_A 126 KKPLFLSMS---------GLSMRENVEMCKRLAAVATEKGVILELNLSCPNVPGKPQVAYDFDAMRQCLTAVSEVYPHSF 196 (354)
T ss_dssp TCCEEEEEC---------CSSHHHHHHHHHHHHHHHHHHCCEEEEECSSCCSTTSCCGGGSHHHHHHHHHHHHHHCCSCE
T ss_pred CCcEEEEec---------cCCHHHHHHHHHHHhhhhhcCCCEEEEeCCCCCCCCchhhccCHHHHHHHHHHHHHhhCCCe
Confidence 589999983 444454 4554541 1368999999973 5778888899988889999
Q ss_pred EEEeCCCCcccccccccccCCCCChHHHHHHHHHHHHcC-Ce
Q 025860 177 LIYPNSGEFYDADRKEWVQNTGVSDEDFVSYVSKWCEVG-AS 217 (247)
Q Consensus 177 ~vyPNaG~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G-~~ 217 (247)
+|.--.+ .+.+++.+.+....+.| +.
T Consensus 197 ~vKi~p~---------------~d~~~~~~~a~~~~~~Gg~d 223 (354)
T 4ef8_A 197 GVKMPPY---------------FDFAHFDAAAEILNEFPKVQ 223 (354)
T ss_dssp EEEECCC---------------CSHHHHHHHHHHHHTCTTEE
T ss_pred EEEecCC---------------CCHHHHHHHHHHHHhCCCcc
Confidence 8875332 12456777777666776 44
No 63
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=92.57 E-value=0.43 Score=41.93 Aligned_cols=83 Identities=13% Similarity=0.115 Sum_probs=52.8
Q ss_pred HHHHHHHHhcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEEc
Q 025860 75 HRRRVQVLVESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGIN 154 (247)
Q Consensus 75 ~~~q~~~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~N 154 (247)
-.+|++++.++|+|+|++|.+++.+|++.+.+.+. .|+++.++.. +.+ ...++. .+.+ .|+.-|-+-
T Consensus 173 ai~Ra~ay~~AGAD~if~~~~~~~ee~~~~~~~~~-----~Pl~~n~~~~--g~t-p~~~~~----eL~~-lGv~~v~~~ 239 (298)
T 3eoo_A 173 AIERAIAYVEAGADMIFPEAMKTLDDYRRFKEAVK-----VPILANLTEF--GST-PLFTLD----ELKG-ANVDIALYC 239 (298)
T ss_dssp HHHHHHHHHHTTCSEEEECCCCSHHHHHHHHHHHC-----SCBEEECCTT--SSS-CCCCHH----HHHH-TTCCEEEEC
T ss_pred HHHHHHhhHhcCCCEEEeCCCCCHHHHHHHHHHcC-----CCeEEEeccC--CCC-CCCCHH----HHHH-cCCeEEEEc
Confidence 34588889999999999999999999998777653 7888777532 111 112333 3444 466655554
Q ss_pred CCC----hhHHHHHHHHHHh
Q 025860 155 CTP----PRFISGLILIIKK 170 (247)
Q Consensus 155 C~~----p~~~~~~l~~l~~ 170 (247)
.+. -..|..+++.+++
T Consensus 240 ~~~~raa~~a~~~~~~~i~~ 259 (298)
T 3eoo_A 240 CGAYRAMNKAALNFYETVRR 259 (298)
T ss_dssp SHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHH
Confidence 432 2344555555544
No 64
>1h7n_A 5-aminolaevulinic acid dehydratase; lyase, aldolase, TIM barrel, tetrapyrrole synthesis; HET: SHF; 1.6A {Saccharomyces cerevisiae} SCOP: c.1.10.3 PDB: 1h7p_A* 1h7r_A* 1ohl_A* 1qml_A 1qnv_A 1w31_A* 1h7o_A* 1eb3_A* 1gjp_A* 1ylv_A* 1aw5_A
Probab=92.49 E-value=5.4 Score=35.35 Aligned_cols=173 Identities=13% Similarity=0.061 Sum_probs=110.1
Q ss_pred CeEEEEe--cCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCEEEEecCCCHHHHHHHHHHHHhhCC-C
Q 025860 38 PILVAAS--VGSYGAYLADGSEYSGNYGDAITVETLKDFHRRRVQVLVESAPDLIAFETIPNKIEAQAYAELLEEENI-K 114 (247)
Q Consensus 38 ~~~VaGs--iGP~g~~l~~g~eY~g~y~~~~s~~e~~~~~~~q~~~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~-~ 114 (247)
..+|..+ +.||-..-++|--... ..+.-++-.+.+.+|+-...++|+|++.==-|.+- .+.++.+++.+.+. .
T Consensus 125 dl~VitDvcLc~YT~HGHcGil~~~---g~V~ND~Tl~~Lak~Als~A~AGAdiVAPSdMMDG-rV~aIR~aLd~~G~~~ 200 (342)
T 1h7n_A 125 ELYIICDVCLCEYTSHGHCGVLYDD---GTINRERSVSRLAAVAVNYAKAGAHCVAPSDMIDG-RIRDIKRGLINANLAH 200 (342)
T ss_dssp TSEEEEEECSTTTBTTCCSSCBCTT---SSBCHHHHHHHHHHHHHHHHHHTCSEEEECCCCTT-HHHHHHHHHHHTTCTT
T ss_pred CeEEEEeeecccccCCCceeEECCC---CcCccHHHHHHHHHHHHHHHHcCCCeeeccccccc-HHHHHHHHHHHCCCcc
Confidence 3566665 5566544444321101 12667888888888999999999999996666654 35777778877654 2
Q ss_pred CcEEEEEEEcC-------------------C--CcccCCCcHHHHHHHHH--hCCCCeEEEEcCCChhHHHHHHHHHHhh
Q 025860 115 IPAWFSFNSKD-------------------G--VNVVSGDSLLECASIAE--SCKRVVSVGINCTPPRFISGLILIIKKV 171 (247)
Q Consensus 115 ~pv~is~~~~~-------------------~--~~l~~G~~~~~~~~~~~--~~~~~~avG~NC~~p~~~~~~l~~l~~~ 171 (247)
---++|.+.+- + ....+--.-.++++.+. -..|+|.|-|-=.-|. +.+++.+++.
T Consensus 201 ~v~ImsYsaKyASafYGPFRdAa~Sap~~GDRktYQmdpaN~~EAlre~~~Di~EGAD~vMVKPal~Y--LDIi~~vk~~ 278 (342)
T 1h7n_A 201 KTFVLSYAAKFSGNLYGPFRDAACSAPSNGDRKCYQLPPAGRGLARRALERDMSEGADGIIVKPSTFY--LDIMRDASEI 278 (342)
T ss_dssp TCEEEEEEEEBCSSCCHHHHHHHTCCCSSSCSTTTSBCTTCHHHHHHHHHHHHHTTCSEEEEESSGGG--HHHHHHHHHH
T ss_pred CceEeechHHHhHHhhHHHHHHHhcCCCCCCccccCCCCCCHHHHHHHHHhhHHhCCCeEEEecCccH--HHHHHHHHHh
Confidence 23445777541 1 11122233444554432 1358999998876443 6778888888
Q ss_pred c-CCCEEEEeCCCC---cccccccccccCCCCChHHHHHHHHHHHHcCCeEEe
Q 025860 172 T-AKPILIYPNSGE---FYDADRKEWVQNTGVSDEDFVSYVSKWCEVGASLVG 220 (247)
Q Consensus 172 ~-~~pl~vyPNaG~---~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~iIG 220 (247)
. +.|+.+|--+|+ ......+.|... ..-+.+....++.+|+.+|=
T Consensus 279 ~p~~P~aaYqVSGEYAMikaAa~~GwiD~----~~~v~Esl~~~kRAGAd~Ii 327 (342)
T 1h7n_A 279 CKDLPICAYHVSGEYAMLHAAAEKGVVDL----KTIAFESHQGFLRAGARLII 327 (342)
T ss_dssp TTTSCEEEEECHHHHHHHHHHHHTTSSCH----HHHHHHHHHHHHHTTCSEEE
T ss_pred ccCCCeEEEEcCcHHHHHHHHHHcCCccH----HHHHHHHHHHHHhcCCCEEE
Confidence 8 999999999996 222223567542 23466778888999999874
No 65
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=92.46 E-value=1.1 Score=38.64 Aligned_cols=103 Identities=13% Similarity=0.096 Sum_probs=67.1
Q ss_pred HHHHHHHHhcCC-CCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEE
Q 025860 75 HRRRVQVLVESA-PDLIAFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGI 153 (247)
Q Consensus 75 ~~~q~~~l~~~g-vD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~ 153 (247)
|.+.++.+++.| +|+|=+|-...-.-++.+++.+++. +.++++|+.-.+. +++-+.+.+.++.+.. .++|.+=+
T Consensus 121 ~~~ll~~~l~~g~~dyIDvEl~~~~~~~~~l~~~a~~~--~~kvI~S~Hdf~~--tP~~~el~~~~~~~~~-~GaDIvKi 195 (276)
T 3o1n_A 121 YIDLNRAAVDSGLVDMIDLELFTGDDEVKATVGYAHQH--NVAVIMSNHDFHK--TPAAEEIVQRLRKMQE-LGADIPKI 195 (276)
T ss_dssp HHHHHHHHHHHTCCSEEEEEGGGCHHHHHHHHHHHHHT--TCEEEEEEEESSC--CCCHHHHHHHHHHHHH-TTCSEEEE
T ss_pred HHHHHHHHHhcCCCCEEEEECcCCHHHHHHHHHHHHhC--CCEEEEEeecCCC--CcCHHHHHHHHHHHHH-cCCCEEEE
Confidence 444555555667 9999999876666666677766665 5899999974322 2233344445555554 58888777
Q ss_pred cCC--ChhHHHHHHHHHHh---h-cCCCEEEEeCC
Q 025860 154 NCT--PPRFISGLILIIKK---V-TAKPILIYPNS 182 (247)
Q Consensus 154 NC~--~p~~~~~~l~~l~~---~-~~~pl~vyPNa 182 (247)
-+. +++....+++.... . .+.|++.+.=+
T Consensus 196 a~~a~s~~Dvl~Ll~~~~~~~~~~~~~PlIa~~MG 230 (276)
T 3o1n_A 196 AVMPQTKADVLTLLTATVEMQERYADRPIITMSMS 230 (276)
T ss_dssp EECCSSHHHHHHHHHHHHHHHHHTCCSCCEEEECS
T ss_pred EecCCChHHHHHHHHHHHHHHhcCCCCCEEEEECC
Confidence 775 57777777765433 2 57899888544
No 66
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=92.28 E-value=0.32 Score=40.95 Aligned_cols=90 Identities=9% Similarity=0.113 Sum_probs=56.9
Q ss_pred HHHHHHHhcCCCCEEEEecCC--CHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEE
Q 025860 76 RRRVQVLVESAPDLIAFETIP--NKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGI 153 (247)
Q Consensus 76 ~~q~~~l~~~gvD~i~~ET~~--~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~ 153 (247)
.+|++.+.+.|+|++++-+-. +..+++..++.+++. ++++++... +++++.+ +.+ .|++.||+
T Consensus 91 ~~~i~~~~~~Gad~V~l~~~~~~~p~~l~~~i~~~~~~--g~~v~~~v~-----------t~eea~~-a~~-~Gad~Ig~ 155 (232)
T 3igs_A 91 LDDVDALAQAGAAIIAVDGTARQRPVAVEALLARIHHH--HLLTMADCS-----------SVDDGLA-CQR-LGADIIGT 155 (232)
T ss_dssp HHHHHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHHT--TCEEEEECC-----------SHHHHHH-HHH-TTCSEEEC
T ss_pred HHHHHHHHHcCCCEEEECccccCCHHHHHHHHHHHHHC--CCEEEEeCC-----------CHHHHHH-HHh-CCCCEEEE
Confidence 346666778999999987642 345677778888876 477776442 4566555 444 58999997
Q ss_pred cCCC-------hhHHHHHHHHHHhhcCCCEEEEeCCC
Q 025860 154 NCTP-------PRFISGLILIIKKVTAKPILIYPNSG 183 (247)
Q Consensus 154 NC~~-------p~~~~~~l~~l~~~~~~pl~vyPNaG 183 (247)
|-.+ ...-..+++++.+. +.|++ +++|
T Consensus 156 ~~~g~t~~~~~~~~~~~~i~~l~~~-~ipvI--A~GG 189 (232)
T 3igs_A 156 TMSGYTTPDTPEEPDLPLVKALHDA-GCRVI--AEGR 189 (232)
T ss_dssp TTTTSSSSSCCSSCCHHHHHHHHHT-TCCEE--EESC
T ss_pred cCccCCCCCCCCCCCHHHHHHHHhc-CCcEE--EECC
Confidence 5321 11123566777665 77754 4444
No 67
>1l6s_A Porphobilinogen synthase; dehydratase, lyase; HET: CME DSB; 1.70A {Escherichia coli} SCOP: c.1.10.3 PDB: 1i8j_A* 1l6y_A* 1b4e_A
Probab=92.25 E-value=5.6 Score=34.96 Aligned_cols=170 Identities=14% Similarity=0.128 Sum_probs=107.6
Q ss_pred CeEEEEe--cCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCEEEEecCCCHHHHHHHHHHHHhhCC-C
Q 025860 38 PILVAAS--VGSYGAYLADGSEYSGNYGDAITVETLKDFHRRRVQVLVESAPDLIAFETIPNKIEAQAYAELLEEENI-K 114 (247)
Q Consensus 38 ~~~VaGs--iGP~g~~l~~g~eY~g~y~~~~s~~e~~~~~~~q~~~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~-~ 114 (247)
...|..+ +.||-..-++|---.| .+.-++-.+.+.+|+-...++|+|++.==-|.+- .+.++.+++.+.+. +
T Consensus 111 dl~vitDvcLc~YT~HGHcGil~~g----~V~ND~Tl~~Lak~Als~A~AGAdiVAPSdMMDG-rV~aIR~aLd~~G~~~ 185 (323)
T 1l6s_A 111 EMIVMSDTCFCEYTSHGHCGVLCEH----GVDNDATLENLGKQAVVAAAAGADFIAPSAAMDG-QVQAIRQALDAAGFKD 185 (323)
T ss_dssp TSEEEEEECSTTTBSSCCSSCBCSS----SBCHHHHHHHHHHHHHHHHHHTCSEEEECSCCTT-HHHHHHHHHHHTTCTT
T ss_pred CeEEEEeeeccccCCCCceEeccCC----cCccHHHHHHHHHHHHHHHHcCCCeEeccccccc-HHHHHHHHHHhCCCCC
Confidence 3566665 4566554444422111 2667888888888998899999999996666554 35677777777653 3
Q ss_pred CcEEEEEEEcC------------------C--CcccCCCcHHHHHHHHH--hCCCCeEEEEcCCChhHHHHHHHHHHhhc
Q 025860 115 IPAWFSFNSKD------------------G--VNVVSGDSLLECASIAE--SCKRVVSVGINCTPPRFISGLILIIKKVT 172 (247)
Q Consensus 115 ~pv~is~~~~~------------------~--~~l~~G~~~~~~~~~~~--~~~~~~avG~NC~~p~~~~~~l~~l~~~~ 172 (247)
.| ++|.+.+- + ....+--+-.++++.+. -..|+|.|-|-=.-|. +.++..+++..
T Consensus 186 v~-ImsYsaKyASafYGPFRdAa~Sap~GDRktYQmdpaN~~EAlre~~~Di~EGAD~vMVKPal~Y--LDIi~~vk~~~ 262 (323)
T 1l6s_A 186 TA-IMSYSTKFASSFYGPFREAAGSALKGDRKSYQMNPMNRREAIRESLLDEAQGADCLMVKPAGAY--LDIVRELRERT 262 (323)
T ss_dssp CE-EBCCCEEBCCSCCHHHHHHHTCCCSSCCTTTSBCTTCHHHHHHHHHHHHHTTCSBEEEESCTTC--HHHHHHHHTTC
T ss_pred ce-eeehhHHHhHHhhHHHHHHhcCCCCCCccccCCCCCCHHHHHHHHHhhHHhCCceEEEecCcch--hHHHHHHHHhc
Confidence 33 33554320 0 11112223445554442 1358999998876543 57788888888
Q ss_pred CCCEEEEeCCCC---cccccccccccCCCCChHHHHHHHHHHHHcCCeEE
Q 025860 173 AKPILIYPNSGE---FYDADRKEWVQNTGVSDEDFVSYVSKWCEVGASLV 219 (247)
Q Consensus 173 ~~pl~vyPNaG~---~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~iI 219 (247)
+.|+.+|--+|+ ......+.|... ..-+.+....++.+|+.+|
T Consensus 263 ~~P~aaYqVSGEYAMikaAa~~GwiD~----~~~vlEsl~~~kRAGAd~I 308 (323)
T 1l6s_A 263 ELPIGAYQVSGEYAMIKFAALAGAIDE----EKVVLESLGSIKRAGADLI 308 (323)
T ss_dssp SSCEEEEECHHHHHHHHHHHHTTSSCH----HHHHHHHHHHHHHTTCSEE
T ss_pred CCCeEEEEcCcHHHHHHHHHHcCCccH----HHHHHHHHHHHHhcCCCEE
Confidence 999999999996 222223567542 2346777888899999987
No 68
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=92.12 E-value=0.42 Score=42.38 Aligned_cols=44 Identities=18% Similarity=0.009 Sum_probs=35.9
Q ss_pred HHHHHHHHHhcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEE
Q 025860 74 FHRRRVQVLVESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAWFSFN 122 (247)
Q Consensus 74 ~~~~q~~~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~ 122 (247)
.-.++++++.++|+|.|++|.+++.+|++.+.+.+ +.|+.+.++
T Consensus 190 ~ai~Ra~Ay~eAGAd~i~~e~~~~~e~~~~i~~~l-----~~P~lan~~ 233 (318)
T 1zlp_A 190 EGIRRANLYKEAGADATFVEAPANVDELKEVSAKT-----KGLRIANMI 233 (318)
T ss_dssp HHHHHHHHHHHTTCSEEEECCCCSHHHHHHHHHHS-----CSEEEEEEC
T ss_pred HHHHHHHHHHHcCCCEEEEcCCCCHHHHHHHHHhc-----CCCEEEEec
Confidence 44558899999999999999999999998877654 378877664
No 69
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=92.03 E-value=0.2 Score=43.96 Aligned_cols=84 Identities=13% Similarity=0.111 Sum_probs=53.7
Q ss_pred HHHHHHHHHhcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEE
Q 025860 74 FHRRRVQVLVESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGI 153 (247)
Q Consensus 74 ~~~~q~~~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~ 153 (247)
.-.++++++.++|+|+|++|.+++.++++.+.+.+. +|+++.++.. +.+ ...+. +.+.+ .|+..|-+
T Consensus 168 ~ai~ra~ay~eAGAd~i~~e~~~~~~~~~~i~~~~~-----iP~~~N~~~~--g~~-p~~~~----~eL~~-~G~~~v~~ 234 (295)
T 1xg4_A 168 AAIERAQAYVEAGAEMLFPEAITELAMYRQFADAVQ-----VPILANITEF--GAT-PLFTT----DELRS-AHVAMALY 234 (295)
T ss_dssp HHHHHHHHHHHTTCSEEEETTCCSHHHHHHHHHHHC-----SCBEEECCSS--SSS-CCCCH----HHHHH-TTCSEEEE
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCCHHHHHHHHHHcC-----CCEEEEeccc--CCC-CCCCH----HHHHH-cCCCEEEE
Confidence 344588999999999999999999999998777653 6888766531 111 12233 34554 47766655
Q ss_pred cCCC----hhHHHHHHHHHHh
Q 025860 154 NCTP----PRFISGLILIIKK 170 (247)
Q Consensus 154 NC~~----p~~~~~~l~~l~~ 170 (247)
-... -..|..+++.+++
T Consensus 235 ~~~~~~aa~~a~~~~~~~i~~ 255 (295)
T 1xg4_A 235 PLSAFRAMNRAAEHVYNVLRQ 255 (295)
T ss_dssp SSHHHHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHHHH
Confidence 4432 2334555555554
No 70
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=91.95 E-value=5.7 Score=34.36 Aligned_cols=175 Identities=10% Similarity=0.101 Sum_probs=94.7
Q ss_pred CeEEEEecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCEEEEecCCC---------HHHHHHHHHHH
Q 025860 38 PILVAASVGSYGAYLADGSEYSGNYGDAITVETLKDFHRRRVQVLVESAPDLIAFETIPN---------KIEAQAYAELL 108 (247)
Q Consensus 38 ~~~VaGsiGP~g~~l~~g~eY~g~y~~~~s~~e~~~~~~~q~~~l~~~gvD~i~~ET~~~---------~~E~~aa~~~~ 108 (247)
+.+|.|-|=++...+.||..| .+.+++.+ +++.+++.|+|+|=+-.-+. .+|.+.++.++
T Consensus 14 ~~~imGilN~TpdSFsdgg~~-------~~~~~a~~----~a~~~v~~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi 82 (282)
T 1aj0_A 14 HPHVMGILNVTPDSFSDGGTH-------NSLIDAVK----HANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVV 82 (282)
T ss_dssp SCEEEEEEECCTTTSCCCCCC-------THHHHHHH----HHHHHHHHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHH
T ss_pred CCEEEEEEeCCCCcccccccc-------CCHHHHHH----HHHHHHHCCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHH
Confidence 568999999998888776542 24555555 66677789999996654333 77887766665
Q ss_pred HhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEE-EEcCCChhHHHHHHHHHHhhcCCCEEEEeCCCCccc
Q 025860 109 EEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSV-GINCTPPRFISGLILIIKKVTAKPILIYPNSGEFYD 187 (247)
Q Consensus 109 ~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~av-G~NC~~p~~~~~~l~~l~~~~~~pl~vyPNaG~~~d 187 (247)
+.......+.+|+... . .++++...+. |++.| -++...-+.|.+++.. .+.|+++.++.|.+.+
T Consensus 83 ~~l~~~~~~piSIDT~---------~-~~va~aAl~a-Ga~iINdvsg~~d~~~~~~~a~----~~~~vVlmh~~G~p~t 147 (282)
T 1aj0_A 83 EAIAQRFEVWISVDTS---------K-PEVIRESAKV-GAHIINDIRSLSEPGALEAAAE----TGLPVCLMHMQGNPKT 147 (282)
T ss_dssp HHHHHHCCCEEEEECC---------C-HHHHHHHHHT-TCCEEEETTTTCSTTHHHHHHH----HTCCEEEECCSSCTTC
T ss_pred HHHHhhcCCeEEEeCC---------C-HHHHHHHHHc-CCCEEEECCCCCCHHHHHHHHH----hCCeEEEEccCCCCcc
Confidence 5431012445566432 1 3344444342 55533 2332222344444443 3799999999876432
Q ss_pred ccc-cccccCCCCChHHHHHHHHHHHHcCCe---EEeec---CCCChHHHHHHHHHhh
Q 025860 188 ADR-KEWVQNTGVSDEDFVSYVSKWCEVGAS---LVGGC---CRTTPNTIKGIYRTLS 238 (247)
Q Consensus 188 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~G~~---iIGGC---CGt~P~hI~al~~~l~ 238 (247)
... ..|...-..--+.+.+.+....+.|+. ||=-. -|.+.+|--.+-+.++
T Consensus 148 m~~~~~y~d~~~ev~~~l~~~i~~a~~~Gi~~~~IilDPg~gf~k~~~~n~~ll~~l~ 205 (282)
T 1aj0_A 148 MQEAPKYDDVFAEVNRYFIEQIARCEQAGIAKEKLLLDPGFGFGKNLSHNYSLLARLA 205 (282)
T ss_dssp CSCCCCCSCHHHHHHHHHHHHHHHHHHTTCCGGGEEEECCTTSSCCHHHHHHHHHTGG
T ss_pred ccccCccchHHHHHHHHHHHHHHHHHHcCCChhhEEEeCCCCcccCHHHHHHHHHHHH
Confidence 211 111100000023455666777788986 54211 2556775544444443
No 71
>1f8m_A Isocitrate lyase, ICL; alpha-beta barrel, helix-swapping, closed conformation, bromopyuvate modification, structural genomics; 1.80A {Mycobacterium tuberculosis H37RV} SCOP: c.1.12.7 PDB: 1f61_A 1f8i_A
Probab=91.73 E-value=7.2 Score=35.80 Aligned_cols=135 Identities=10% Similarity=0.098 Sum_probs=85.3
Q ss_pred HHHHHHhcCCCCEEEEecCC---------------CHHHHHHHHHHHHhhC--CCCcEEEEEEEcCCCc-----------
Q 025860 77 RRVQVLVESAPDLIAFETIP---------------NKIEAQAYAELLEEEN--IKIPAWFSFNSKDGVN----------- 128 (247)
Q Consensus 77 ~q~~~l~~~gvD~i~~ET~~---------------~~~E~~aa~~~~~~~~--~~~pv~is~~~~~~~~----------- 128 (247)
+.++.|+++||-.+-||-.. +..|...=+.+++..- .+.+++|---.+....
T Consensus 167 ~tvk~~i~AGaaGi~IEDq~~~~KkCGH~~gk~lvp~~e~v~rI~AAr~A~~~~g~d~vIiARTDa~~a~li~s~~d~~d 246 (429)
T 1f8m_A 167 ELQKALIAAGVAGSHWEDQLASEKKCGHLGGKVLIPTQQHIRTLTSARLAADVADVPTVVIARTDAEAATLITSDVDERD 246 (429)
T ss_dssp HHHHHHHHTTCSEEEEECBCGGGCCCTTSSCCEECCHHHHHHHHHHHHHHHHHTTCCCEEEEEECTTTCCEESCCCSTTT
T ss_pred HHHHHHHHcCCEEEEEecCCCccccccCCCCCeeeCHHHHHHHHHHHHHHHHhcCCCEEEEEEechhhhccccccccccc
Confidence 47888999999999999764 2455554444444321 1356665555443210
Q ss_pred --------ccC-----CCcHHHHHHHHHh-CCCCeEEEEcC-C-ChhHHHHHHHHHHhhcCCCEEEEeCCCCcccccccc
Q 025860 129 --------VVS-----GDSLLECASIAES-CKRVVSVGINC-T-PPRFISGLILIIKKVTAKPILIYPNSGEFYDADRKE 192 (247)
Q Consensus 129 --------l~~-----G~~~~~~~~~~~~-~~~~~avG~NC-~-~p~~~~~~l~~l~~~~~~pl~vyPNaG~~~d~~~~~ 192 (247)
... ...++++++.+.. ..++|+|=+-. . +++.+..+.+.+.......+++|+.... -.
T Consensus 247 ~~fl~g~~~~eg~y~~~~gld~AI~Ra~AYa~gAD~if~e~~~~~~eei~~f~~~v~~~~P~~~La~n~sPs------f~ 320 (429)
T 1f8m_A 247 QPFITGERTREGFYRTKNGIEPCIARAKAYAPFADLIWMETGTPDLEAARQFSEAVKAEYPDQMLAYNCSPS------FN 320 (429)
T ss_dssp GGGEEEEECTTSCEEECCSHHHHHHHHHHHGGGCSEEEECCSSCCHHHHHHHHHHHHTTCTTCEEEEECCTT------SC
T ss_pred cccccCCCCcccccccccCHHHHHHHHHHHHhcCCEEEeCCCCCCHHHHHHHHHHhcccCCCceeecCCCCC------CC
Confidence 111 2568888887753 23789888864 3 6888888888876422222678876432 13
Q ss_pred cccCCCCChHHHHHHHHHHHHcCCeEE
Q 025860 193 WVQNTGVSDEDFVSYVSKWCEVGASLV 219 (247)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~G~~iI 219 (247)
|... ++++.+..|..++.++|++++
T Consensus 321 w~~~--~~~~~~~~f~~eL~~lG~~~v 345 (429)
T 1f8m_A 321 WKKH--LDDATIAKFQKELAAMGFKFQ 345 (429)
T ss_dssp HHHH--CCHHHHHHHHHHHHHHTEEEE
T ss_pred cccc--cchhhHhHHHHHHHHcCCeEE
Confidence 5332 568889999999999998654
No 72
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=91.68 E-value=0.9 Score=37.79 Aligned_cols=99 Identities=8% Similarity=0.045 Sum_probs=57.9
Q ss_pred HHHHHHhcCCCCEEEEe--cCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCC-----cHHHHHHHHHhCCCCe
Q 025860 77 RRVQVLVESAPDLIAFE--TIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGD-----SLLECASIAESCKRVV 149 (247)
Q Consensus 77 ~q~~~l~~~gvD~i~~E--T~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~-----~~~~~~~~~~~~~~~~ 149 (247)
++++.+++.|+|.+.+= .++++..+. +..+..+ ..+.+++++..+....+|- +..+.++.+.+ .+++
T Consensus 88 ~~~~~~l~~Gad~V~lg~~~l~~p~~~~---~~~~~~g--~~~~~~l~~~~g~v~~~g~~~~~~~~~e~~~~~~~-~G~~ 161 (244)
T 1vzw_A 88 DTLAAALATGCTRVNLGTAALETPEWVA---KVIAEHG--DKIAVGLDVRGTTLRGRGWTRDGGDLYETLDRLNK-EGCA 161 (244)
T ss_dssp HHHHHHHHTTCSEEEECHHHHHCHHHHH---HHHHHHG--GGEEEEEEEETTEECCSSSCCCCCBHHHHHHHHHH-TTCC
T ss_pred HHHHHHHHcCCCEEEECchHhhCHHHHH---HHHHHcC--CcEEEEEEccCCEEEEcCcccCCCCHHHHHHHHHh-CCCC
Confidence 46777788999998874 445544333 4444443 3566677765321111221 56666666766 5788
Q ss_pred EEEEcCCChhH-----HHHHHHHHHhhcCCCEEEEeCCC
Q 025860 150 SVGINCTPPRF-----ISGLILIIKKVTAKPILIYPNSG 183 (247)
Q Consensus 150 avG~NC~~p~~-----~~~~l~~l~~~~~~pl~vyPNaG 183 (247)
.|.++...+.. -..+++++++..+.|+++ ++|
T Consensus 162 ~i~~~~~~~~~~~~g~~~~~~~~i~~~~~ipvia--~GG 198 (244)
T 1vzw_A 162 RYVVTDIAKDGTLQGPNLELLKNVCAATDRPVVA--SGG 198 (244)
T ss_dssp CEEEEEC-------CCCHHHHHHHHHTCSSCEEE--ESC
T ss_pred EEEEeccCcccccCCCCHHHHHHHHHhcCCCEEE--ECC
Confidence 88888754322 246777777777788544 555
No 73
>2gzm_A Glutamate racemase; enzyme, isomerase; HET: DGL; 1.99A {Bacillus anthracis}
Probab=91.68 E-value=3.8 Score=34.82 Aligned_cols=154 Identities=13% Similarity=0.087 Sum_probs=81.3
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHH
Q 025860 61 NYGDAITVETLKDFHRRRVQVLVESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECAS 140 (247)
Q Consensus 61 ~y~~~~s~~e~~~~~~~q~~~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~ 140 (247)
+|+. .+.+++.++..+.++.|.+.|+|+|++=+.+.- ..+++.+++.. ++||+ |. .+.+++
T Consensus 41 Pyg~-~s~~~i~~~~~~~~~~L~~~g~d~iviaCNTas---~~~l~~lr~~~-~iPvi-------------gi-~ep~~~ 101 (267)
T 2gzm_A 41 PYGP-RSREEVRQFTWEMTEHLLDLNIKMLVIACNTAT---AVVLEEMQKQL-PIPVV-------------GV-IHPGSR 101 (267)
T ss_dssp CCTT-SCHHHHHHHHHHHHHHHHTTTCSEEEECCHHHH---HHHHHHHHHHC-SSCEE-------------ES-HHHHHH
T ss_pred CCCC-CCHHHHHHHHHHHHHHHHHCCCCEEEEeCchhh---HHHHHHHHHhC-CCCEE-------------ee-cHHHHH
Confidence 3443 478999999999999999999999998543321 12566677654 68877 21 233343
Q ss_pred HHHhCCCCeEEEEcCCChh----HHHHHHHHHHhhcCCCEEEEeCCCCcccccccccccCCCCChHHHHHHHHHHHHcCC
Q 025860 141 IAESCKRVVSVGINCTPPR----FISGLILIIKKVTAKPILIYPNSGEFYDADRKEWVQNTGVSDEDFVSYVSKWCEVGA 216 (247)
Q Consensus 141 ~~~~~~~~~avG~NC~~p~----~~~~~l~~l~~~~~~pl~vyPNaG~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 216 (247)
.+....+..-||+=.+... .....++... .+..+...|..+.+..-.. .+... ....+.+.++++.+.+.|+
T Consensus 102 ~A~~~~~~~rIgVlaT~~T~~~~~y~~~l~~~~--~g~~v~~~~~~~~v~~ie~-g~~~~-~~~~~~l~~~~~~l~~~~~ 177 (267)
T 2gzm_A 102 TALKVTNTYHVGIIGTIGTVKSGAYEEALKSIN--NRVMVESLACPPFVELVES-GNFES-EMAYEVVRETLQPLKNTDI 177 (267)
T ss_dssp HHHHHCSSCEEEEEECHHHHHHTHHHHHHHHHC--TTCEEEEEECTTHHHHHHT-TCSSS-HHHHHHHHHHHHHHHHSCC
T ss_pred HHHHccCCCEEEEEEChHHhccHHHHHHHHHhC--CCCEEeccCCHHHHHHHhC-CCCCC-HHHHHHHHHHHHHHHhcCC
Confidence 3322123456777665322 2334444331 1333444555443211111 11100 0113446677778877776
Q ss_pred eEEe-ecCCCChHHHHHHHHHhh
Q 025860 217 SLVG-GCCRTTPNTIKGIYRTLS 238 (247)
Q Consensus 217 ~iIG-GCCGt~P~hI~al~~~l~ 238 (247)
..|= ||-. -|--...+.+.+.
T Consensus 178 d~iVLGCTh-~p~l~~~i~~~~~ 199 (267)
T 2gzm_A 178 DTLILGCTH-YPILGPVIKQVMG 199 (267)
T ss_dssp SEEEECSTT-GGGGHHHHHHHHC
T ss_pred CEEEEcccC-hHHHHHHHHHHcC
Confidence 6543 4544 4445555655553
No 74
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=91.55 E-value=0.38 Score=40.45 Aligned_cols=90 Identities=13% Similarity=0.211 Sum_probs=56.9
Q ss_pred HHHHHHHhcCCCCEEEEecC--CCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEE
Q 025860 76 RRRVQVLVESAPDLIAFETI--PNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGI 153 (247)
Q Consensus 76 ~~q~~~l~~~gvD~i~~ET~--~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~ 153 (247)
.+|++.+.++|+|++++-+- .+..+++..++.+++. ++++++.. .+++++.+. .+ .|++.||+
T Consensus 91 ~~~i~~~~~aGad~I~l~~~~~~~p~~l~~~i~~~~~~--g~~v~~~v-----------~t~eea~~a-~~-~Gad~Ig~ 155 (229)
T 3q58_A 91 LQDVDALAQAGADIIAFDASFRSRPVDIDSLLTRIRLH--GLLAMADC-----------STVNEGISC-HQ-KGIEFIGT 155 (229)
T ss_dssp HHHHHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHHT--TCEEEEEC-----------SSHHHHHHH-HH-TTCSEEEC
T ss_pred HHHHHHHHHcCCCEEEECccccCChHHHHHHHHHHHHC--CCEEEEec-----------CCHHHHHHH-Hh-CCCCEEEe
Confidence 34666677899999988764 2445677777888875 47777643 245666554 34 58999997
Q ss_pred cCCC------h-hHHHHHHHHHHhhcCCCEEEEeCCC
Q 025860 154 NCTP------P-RFISGLILIIKKVTAKPILIYPNSG 183 (247)
Q Consensus 154 NC~~------p-~~~~~~l~~l~~~~~~pl~vyPNaG 183 (247)
|-.+ + ..-..+++.+.+. +.|++ .++|
T Consensus 156 ~~~g~t~~~~~~~~~~~li~~l~~~-~ipvI--A~GG 189 (229)
T 3q58_A 156 TLSGYTGPITPVEPDLAMVTQLSHA-GCRVI--AEGR 189 (229)
T ss_dssp TTTTSSSSCCCSSCCHHHHHHHHTT-TCCEE--EESS
T ss_pred cCccCCCCCcCCCCCHHHHHHHHHc-CCCEE--EECC
Confidence 5321 0 1123667777665 77754 4444
No 75
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=91.23 E-value=3.7 Score=34.93 Aligned_cols=107 Identities=9% Similarity=0.091 Sum_probs=68.8
Q ss_pred CHHHHHHHHHHHHHHHhcCC-CCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhC
Q 025860 67 TVETLKDFHRRRVQVLVESA-PDLIAFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESC 145 (247)
Q Consensus 67 s~~e~~~~~~~q~~~l~~~g-vD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~ 145 (247)
+.++..+.+ +.+.+.| +|++=+|-...-+-.+.+++.+++. +..+++|+.-.+. +++-+.+.+.+..+..
T Consensus 97 ~~~~~~~ll----~~~~~~~~~d~iDvEl~~~~~~~~~l~~~a~~~--~~kiI~S~Hdf~~--TP~~~el~~~~~~~~~- 167 (258)
T 4h3d_A 97 SRDYYTTLN----KEISNTGLVDLIDVELFMGDEVIDEVVNFAHKK--EVKVIISNHDFNK--TPKKEEIVSRLCRMQE- 167 (258)
T ss_dssp CHHHHHHHH----HHHHHTTCCSEEEEEGGGCHHHHHHHHHHHHHT--TCEEEEEEEESSC--CCCHHHHHHHHHHHHH-
T ss_pred CHHHHHHHH----HHHHhcCCchhhHHhhhccHHHHHHHHHHHHhC--CCEEEEEEecCCC--CCCHHHHHHHHHHHHH-
Confidence 545444433 3344444 9999999877666667777777765 5899999974322 2333445555666665
Q ss_pred CCCeEEEEcCC--ChhHHHHHHHHHHh----hcCCCEEEEeCC
Q 025860 146 KRVVSVGINCT--PPRFISGLILIIKK----VTAKPILIYPNS 182 (247)
Q Consensus 146 ~~~~avG~NC~--~p~~~~~~l~~l~~----~~~~pl~vyPNa 182 (247)
.++|.+=+-+. +.+....+++.... ..+.|++.+.=+
T Consensus 168 ~gaDIvKia~~~~~~~D~l~Ll~~~~~~~~~~~~~P~I~~~MG 210 (258)
T 4h3d_A 168 LGADLPKIAVMPQNEKDVLVLLEATNEMFKIYADRPIITMSMS 210 (258)
T ss_dssp TTCSEEEEEECCSSHHHHHHHHHHHHHHHHHTCSSCBEEEECT
T ss_pred hCCCEEEEEEccCCHHHHHHHHHHHHHHHHhcCCCCEEEEeCC
Confidence 58888777775 57777777765433 247898776543
No 76
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=91.22 E-value=5.2 Score=33.51 Aligned_cols=103 Identities=12% Similarity=-0.020 Sum_probs=68.2
Q ss_pred HHHHHHHHhcC-CCCEEEEecCC--CHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEE
Q 025860 75 HRRRVQVLVES-APDLIAFETIP--NKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSV 151 (247)
Q Consensus 75 ~~~q~~~l~~~-gvD~i~~ET~~--~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~av 151 (247)
|.+.++.+++. ++|++=+|-.. .-...+.+++.+++. +..+++|+.-.+. +++-+.+.+.+..+.. .|+|.+
T Consensus 85 ~~~ll~~~~~~~~~d~iDvEl~~~~~~~~~~~l~~~~~~~--~~kvI~S~Hdf~~--tp~~~el~~~~~~~~~-~gaDiv 159 (238)
T 1sfl_A 85 YLNLISDLANINGIDMIDIEWQADIDIEKHQRIITHLQQY--NKEVIISHHNFES--TPPLDELQFIFFKMQK-FNPEYV 159 (238)
T ss_dssp HHHHHHHGGGCTTCCEEEEECCTTSCHHHHHHHHHHHHHT--TCEEEEEEEESSC--CCCHHHHHHHHHHHHT-TCCSEE
T ss_pred HHHHHHHHHHhCCCCEEEEEccCCCChHHHHHHHHHHHhc--CCEEEEEecCCCC--CcCHHHHHHHHHHHHH-cCCCEE
Confidence 44455556665 69999999876 555567777777765 5789999974332 2233334555555555 688888
Q ss_pred EEcCC--ChhHHHHHHHHHHh---hcCCCEEEEeCC
Q 025860 152 GINCT--PPRFISGLILIIKK---VTAKPILIYPNS 182 (247)
Q Consensus 152 G~NC~--~p~~~~~~l~~l~~---~~~~pl~vyPNa 182 (247)
=+-+. +++....+++.... ..+.|++++.-+
T Consensus 160 Kia~~a~~~~D~l~ll~~~~~~~~~~~~P~I~~~MG 195 (238)
T 1sfl_A 160 KLAVMPHNKNDVLNLLQAMSTFSDTMDCKVVGISMS 195 (238)
T ss_dssp EEEECCSSHHHHHHHHHHHHHHHHHCSSEEEEEECT
T ss_pred EEEecCCCHHHHHHHHHHHHHHhhcCCCCEEEEECC
Confidence 77775 57777777764433 357899888764
No 77
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=91.20 E-value=0.31 Score=42.96 Aligned_cols=84 Identities=13% Similarity=0.063 Sum_probs=55.3
Q ss_pred HHHHHHHhcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEEcC
Q 025860 76 RRRVQVLVESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGINC 155 (247)
Q Consensus 76 ~~q~~~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~NC 155 (247)
.++++++.++|+|.|++|-+++.+|++.+.+.+. ++|+++.+... +.+ ...++.+ +.+ .|+..|-...
T Consensus 181 i~Ra~ay~eAGAD~ifi~~~~~~~~~~~i~~~~~----~~Pv~~n~~~~--g~~-p~~t~~e----L~~-lGv~~v~~~~ 248 (307)
T 3lye_A 181 IERLRAARDEGADVGLLEGFRSKEQAAAAVAALA----PWPLLLNSVEN--GHS-PLITVEE----AKA-MGFRIMIFSF 248 (307)
T ss_dssp HHHHHHHHHTTCSEEEECCCSCHHHHHHHHHHHT----TSCBEEEEETT--SSS-CCCCHHH----HHH-HTCSEEEEET
T ss_pred HHHHHHHHHCCCCEEEecCCCCHHHHHHHHHHcc----CCceeEEeecC--CCC-CCCCHHH----HHH-cCCeEEEECh
Confidence 3488889999999999999999999999888775 47888877532 221 1224443 333 3555554444
Q ss_pred CC----hhHHHHHHHHHHhh
Q 025860 156 TP----PRFISGLILIIKKV 171 (247)
Q Consensus 156 ~~----p~~~~~~l~~l~~~ 171 (247)
+. ...|...++.+++.
T Consensus 249 ~~~raa~~a~~~~~~~l~~~ 268 (307)
T 3lye_A 249 ATLAPAYAAIRETLVRLRDH 268 (307)
T ss_dssp TTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 32 34566666666654
No 78
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=91.17 E-value=5.8 Score=34.19 Aligned_cols=159 Identities=14% Similarity=0.102 Sum_probs=83.7
Q ss_pred CeEEEEecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCEEEE---------ecCCCHHHHHHHHHHH
Q 025860 38 PILVAASVGSYGAYLADGSEYSGNYGDAITVETLKDFHRRRVQVLVESAPDLIAF---------ETIPNKIEAQAYAELL 108 (247)
Q Consensus 38 ~~~VaGsiGP~g~~l~~g~eY~g~y~~~~s~~e~~~~~~~q~~~l~~~gvD~i~~---------ET~~~~~E~~aa~~~~ 108 (247)
+.+|-|-+-=+..++.||..| .+.+.+.+ +++.+++.|+|+|=+ +.++.-+|++-++-++
T Consensus 6 r~~iMGIlNvTPDSFsDGG~~-------~~~~~a~~----~a~~m~~~GAdiIDIGgeSTRPga~~vs~eeE~~Rv~pvi 74 (270)
T 4hb7_A 6 KTKIMGILNVTPDSFSDGGKF-------NNVETAIN----RVKAMIDEGADIIDVGGVSTRPGHEMVTLEEELNRVLPVV 74 (270)
T ss_dssp CCEEEEEEECC-----------------CHHHHHHH----HHHHHHHTTCSEEEEESCCCSTTCCCCCHHHHHHHHHHHH
T ss_pred CCeEEEEEeCCCCCCCCCCCC-------CCHHHHHH----HHHHHHHCCCCEEEECCccCCCCCCCCchHHHHHHHHHHH
Confidence 467888776666677666543 23444444 777788899999965 5577777888777766
Q ss_pred HhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEE-EcCC-ChhHHHHHHHHHHhhcCCCEEEEeCCCCcc
Q 025860 109 EEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVG-INCT-PPRFISGLILIIKKVTAKPILIYPNSGEFY 186 (247)
Q Consensus 109 ~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG-~NC~-~p~~~~~~l~~l~~~~~~pl~vyPNaG~~~ 186 (247)
+... +..+.+|+.... .++++...+ .|++.|- +... .-..|.+++.. .+.|++++-+.|.+.
T Consensus 75 ~~l~-~~~v~iSIDT~~----------~~Va~~al~-aGa~iINDVs~g~~d~~m~~~va~----~~~~~vlMH~~~~p~ 138 (270)
T 4hb7_A 75 EAIV-GFDVKISVDTFR----------SEVAEACLK-LGVDMINDQWAGLYDHRMFQIVAK----YDAEIILMHNGNGNR 138 (270)
T ss_dssp HHHT-TSSSEEEEECSC----------HHHHHHHHH-HTCCEEEETTTTSSCTHHHHHHHH----TTCEEEEECCCSSCC
T ss_pred HHhh-cCCCeEEEECCC----------HHHHHHHHH-hccceeccccccccchhHHHHHHH----cCCCeEEeccccCCc
Confidence 6653 346778885321 334444444 3666433 2232 22344444433 478888887777542
Q ss_pred cccccccccCCCCChHHHHHHHHHHHHcCC---eEE---eecCCCChHH
Q 025860 187 DADRKEWVQNTGVSDEDFVSYVSKWCEVGA---SLV---GGCCRTTPNT 229 (247)
Q Consensus 187 d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~---~iI---GGCCGt~P~h 229 (247)
+.. .... --.+|.+.+....++|+ +|| |=--|-|++|
T Consensus 139 ~~~--vv~e----v~~~l~~~i~~a~~aGI~~~~IilDPGiGFgKt~~~ 181 (270)
T 4hb7_A 139 DEP--VVEE----MLTSLLAQAHQAKIAGIPSNKIWLDPGIGFAKTRNE 181 (270)
T ss_dssp SSC--HHHH----HHHHHHHHHHHHHHTTCCGGGEEEECCTTSSCCHHH
T ss_pred ccc--chhH----HHHHHHHHHHHHHHcCCCCceEEEeCCCCccccccc
Confidence 210 0100 02335555666777787 343 2223455665
No 79
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=90.99 E-value=2.5 Score=34.14 Aligned_cols=89 Identities=13% Similarity=0.136 Sum_probs=56.6
Q ss_pred HHHHhcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEEcCC-C
Q 025860 79 VQVLVESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGINCT-P 157 (247)
Q Consensus 79 ~~~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~NC~-~ 157 (247)
++.+.++|+|.+++=..+....++.+++.+++.+ +++.+.+. .-.++.+.++.+.+ .+++.|++|-. .
T Consensus 70 ~~~~~~~Gad~v~v~~~~~~~~~~~~~~~~~~~g--~~~~v~~~--------~~~t~~~~~~~~~~-~g~d~i~v~~g~~ 138 (211)
T 3f4w_A 70 SQLLFDAGADYVTVLGVTDVLTIQSCIRAAKEAG--KQVVVDMI--------CVDDLPARVRLLEE-AGADMLAVHTGTD 138 (211)
T ss_dssp HHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHHT--CEEEEECT--------TCSSHHHHHHHHHH-HTCCEEEEECCHH
T ss_pred HHHHHhcCCCEEEEeCCCChhHHHHHHHHHHHcC--CeEEEEec--------CCCCHHHHHHHHHH-cCCCEEEEcCCCc
Confidence 6777889999999987776566788888888874 66665421 11234444455555 47888888732 1
Q ss_pred ----hhHHHHHHHHHHhhc-CCCEEE
Q 025860 158 ----PRFISGLILIIKKVT-AKPILI 178 (247)
Q Consensus 158 ----p~~~~~~l~~l~~~~-~~pl~v 178 (247)
+......++++++.. +.|+.+
T Consensus 139 g~~~~~~~~~~i~~l~~~~~~~~i~~ 164 (211)
T 3f4w_A 139 QQAAGRKPIDDLITMLKVRRKARIAV 164 (211)
T ss_dssp HHHTTCCSHHHHHHHHHHCSSCEEEE
T ss_pred ccccCCCCHHHHHHHHHHcCCCcEEE
Confidence 001345677777664 666544
No 80
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=90.88 E-value=0.5 Score=41.61 Aligned_cols=83 Identities=14% Similarity=0.075 Sum_probs=51.6
Q ss_pred HHHHHHHHhcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEEc
Q 025860 75 HRRRVQVLVESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGIN 154 (247)
Q Consensus 75 ~~~q~~~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~N 154 (247)
-.++++++.++|+|.|++|.+++.+|++.+.+.+ +.|+++.++- .+.+ ...++. .+.+ .|+.-|-+-
T Consensus 177 ai~Ra~ay~eAGAD~i~~e~~~~~~~~~~i~~~~-----~~P~~~n~~~--~g~t-p~~~~~----eL~~-lGv~~v~~~ 243 (305)
T 3ih1_A 177 AIERANAYVKAGADAIFPEALQSEEEFRLFNSKV-----NAPLLANMTE--FGKT-PYYSAE----EFAN-MGFQMVIYP 243 (305)
T ss_dssp HHHHHHHHHHHTCSEEEETTCCSHHHHHHHHHHS-----CSCBEEECCT--TSSS-CCCCHH----HHHH-TTCSEEEEC
T ss_pred HHHHHHHHHHcCCCEEEEcCCCCHHHHHHHHHHc-----CCCEEEeecC--CCCC-CCCCHH----HHHH-cCCCEEEEc
Confidence 3448888999999999999999999988876654 3688766642 1221 123333 3444 466555554
Q ss_pred CCC----hhHHHHHHHHHHh
Q 025860 155 CTP----PRFISGLILIIKK 170 (247)
Q Consensus 155 C~~----p~~~~~~l~~l~~ 170 (247)
.+. -..+..+++.+++
T Consensus 244 ~~~~raa~~a~~~~~~~i~~ 263 (305)
T 3ih1_A 244 VTSLRVAAKAYENVFTLIKE 263 (305)
T ss_dssp SHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHh
Confidence 432 2345555555554
No 81
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=90.76 E-value=0.3 Score=42.84 Aligned_cols=43 Identities=12% Similarity=0.200 Sum_probs=35.8
Q ss_pred HHHHHHHhcCCCCEEEEec-CCCHHHHHHHHHHHHhhCCCCcEEEEE
Q 025860 76 RRRVQVLVESAPDLIAFET-IPNKIEAQAYAELLEEENIKIPAWFSF 121 (247)
Q Consensus 76 ~~q~~~l~~~gvD~i~~ET-~~~~~E~~aa~~~~~~~~~~~pv~is~ 121 (247)
.++++++.++|+|.|++|+ +++.+|++.+.+.++. .+|+++..
T Consensus 173 i~Ra~ay~eAGAd~i~~e~~~~~~~~~~~i~~~~~~---~~P~i~~~ 216 (295)
T 1s2w_A 173 LKRAEAYRNAGADAILMHSKKADPSDIEAFMKAWNN---QGPVVIVP 216 (295)
T ss_dssp HHHHHHHHHTTCSEEEECCCSSSSHHHHHHHHHHTT---CSCEEECC
T ss_pred HHHHHHHHHcCCCEEEEcCCCCCHHHHHHHHHHcCC---CCCEEEeC
Confidence 3489999999999999998 8999999998887762 47987653
No 82
>1w5q_A Delta-aminolevulinic acid dehydratase; synthase, evolution, metalloenzyme, porphobilinogen synthase, protein engineering,; 1.4A {Pseudomonas aeruginosa} PDB: 1w5p_A* 1w5o_A 1w5n_A 1w56_A 1w5m_A 1w54_A 1gzg_A* 1b4k_A 2woq_A* 2c14_A* 2c16_A* 2c19_A* 2c15_A* 2c18_A* 2c13_A*
Probab=90.49 E-value=8.8 Score=33.90 Aligned_cols=171 Identities=13% Similarity=0.112 Sum_probs=105.6
Q ss_pred CeEEEEe--cCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCC
Q 025860 38 PILVAAS--VGSYGAYLADGSEYSGNYGDAITVETLKDFHRRRVQVLVESAPDLIAFETIPNKIEAQAYAELLEEENIKI 115 (247)
Q Consensus 38 ~~~VaGs--iGP~g~~l~~g~eY~g~y~~~~s~~e~~~~~~~q~~~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~ 115 (247)
..+|..+ +.||-..=++|--... ..+.-++-.+.+.+|+-...++|+|++.==-|.+-. +.++.+++.+.+..-
T Consensus 121 dl~vitDvcLc~YT~HGHcGil~~~---g~V~ND~Tl~~L~k~Als~A~AGADiVAPSdMMDGr-V~aIR~aLd~~G~~~ 196 (337)
T 1w5q_A 121 ELGIITDVCLCEFTTHGQCGILDDD---GYVLNDVSIDVLVRQALSHAEAGAQVVAPSDMMDGR-IGAIREALESAGHTN 196 (337)
T ss_dssp TSEEEEEECSTTTBTTCCSSCBCTT---SCBCHHHHHHHHHHHHHHHHHTTCSEEEECSCCTTH-HHHHHHHHHHTTCTT
T ss_pred CeEEEEeeecccCCCCCcceeeCCC---CcCccHHHHHHHHHHHHHHHHcCCCeEecccccccH-HHHHHHHHHHCCCCC
Confidence 3566665 4566554444422100 126677888888889988999999999966666543 566777777765322
Q ss_pred cEEEEEEEcC---------------------CCc---ccCCCcHHHHHHHHH--hCCCCeEEEEcCCChhHHHHHHHHHH
Q 025860 116 PAWFSFNSKD---------------------GVN---VVSGDSLLECASIAE--SCKRVVSVGINCTPPRFISGLILIIK 169 (247)
Q Consensus 116 pv~is~~~~~---------------------~~~---l~~G~~~~~~~~~~~--~~~~~~avG~NC~~p~~~~~~l~~l~ 169 (247)
--++|.+.+- +.+ +..+ +-.++++.+. -..|+|.|-|-=.-|. +.++..++
T Consensus 197 v~ImsYsaKyASafYGPFRdAa~Sap~f~~GDrktYQmdpa-N~~EAlrE~~~Di~EGAD~vMVKPal~Y--LDIir~vk 273 (337)
T 1w5q_A 197 VRVMAYSAKYASAYYGPFRDAVGSASNLGKGNRATYQMDPA-NSDEALHEVAADLAEGADMVMVKPGMPY--LDIVRRVK 273 (337)
T ss_dssp CEEEEEEEEBCCGGGHHHHHC----------CGGGTSBCTT-CSHHHHHHHHHHHHTTCSEEEEESCGGG--HHHHHHHH
T ss_pred ceeehhHHHHHHHHHHHHHHHhcCCcccCCCCccccCCCCC-ChHHHHHHHHhhHHhCCCEEEEcCCCch--HHHHHHHH
Confidence 3344665431 000 1112 2233443332 1358999998876443 56788888
Q ss_pred hhcCCCEEEEeCCCC---cccccccccccCCCCChHHHHHHHHHHHHcCCeEEe
Q 025860 170 KVTAKPILIYPNSGE---FYDADRKEWVQNTGVSDEDFVSYVSKWCEVGASLVG 220 (247)
Q Consensus 170 ~~~~~pl~vyPNaG~---~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~iIG 220 (247)
+..+.|+.+|--+|+ ......+.|.. . .-+.+....++.+|+.+|=
T Consensus 274 ~~~~~PvaaYqVSGEYAMikaAa~~GwiD-~----~~v~Esl~~~kRAGAd~Ii 322 (337)
T 1w5q_A 274 DEFRAPTFVYQVSGEYAMHMGAIQNGWLA-E----SVILESLTAFKRAGADGIL 322 (337)
T ss_dssp HHHCSCEEEEECHHHHHHHHHHHHTTSSC-T----THHHHHHHHHHHHTCSEEE
T ss_pred HhcCCCEEEEEcCcHHHHHHHHHHcCCcc-H----HHHHHHHHHHHhcCCCEEe
Confidence 888999999999996 22222356754 2 3466777778888888873
No 83
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=90.05 E-value=8.9 Score=36.87 Aligned_cols=136 Identities=10% Similarity=-0.022 Sum_probs=77.5
Q ss_pred CHHHHHHHHHHHHHHHhcCCCCEEEEecCC-------------------CHHHHHHHHHHHHhhCCCCcEEEEEEEcCC-
Q 025860 67 TVETLKDFHRRRVQVLVESAPDLIAFETIP-------------------NKIEAQAYAELLEEENIKIPAWFSFNSKDG- 126 (247)
Q Consensus 67 s~~e~~~~~~~q~~~l~~~gvD~i~~ET~~-------------------~~~E~~aa~~~~~~~~~~~pv~is~~~~~~- 126 (247)
+.+.+..+|..++ +.|+.+|+.|... .+...+.+.+++++. +.++++++.=...
T Consensus 42 ~~~~~~~~~~~~a----~gG~gliite~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vh~~--g~~i~~Ql~h~Gr~ 115 (690)
T 3k30_A 42 DPSAQASMRKIKA----EGGWSAVCTEQVEIHATSDIAPFIELRIWDDQDLPALKRIADAIHEG--GGLAGIELAHNGMN 115 (690)
T ss_dssp CHHHHHHHHHHHH----HTTCSEEEEEEEECSGGGCCTTSCCEECSSGGGHHHHHHHHHHHHHT--TCEEEEEEECCGGG
T ss_pred ChHHHHHHHHHHh----ccCCEEEEecceEeccccccCCCcCCccCCHHHHHHHHHHHHHHHhc--CCEEEEEccCCccc
Confidence 4444544554444 4789999998432 134456667777776 4788888862100
Q ss_pred ------C--------cccC-----C---------------CcHHHHHHHHHhCCCCeEEEEcCCChh-------------
Q 025860 127 ------V--------NVVS-----G---------------DSLLECASIAESCKRVVSVGINCTPPR------------- 159 (247)
Q Consensus 127 ------~--------~l~~-----G---------------~~~~~~~~~~~~~~~~~avG~NC~~p~------------- 159 (247)
+ .-.. + +.+.++++.+.+ .|+|+|=||+.++.
T Consensus 116 ~~~~~~~~~~~~ps~~~~~~~~~~~~~p~~~t~~ei~~~i~~f~~aA~~a~~-aGfDgVeih~a~gy~L~~qFlsp~~N~ 194 (690)
T 3k30_A 116 APNQLSRETPLGPGHLPVAPDTIAPIQARAMTKQDIDDLRRWHRNAVRRSIE-AGYDIVYVYGAHGYSGVHHFLSKRYNQ 194 (690)
T ss_dssp CCCTTTCCCCEESSSCBSCSSCCCSCBCEECCHHHHHHHHHHHHHHHHHHHH-HTCSEEEEEECTTCSHHHHHHCTTTCC
T ss_pred ccccccCCCccCCCCCcccccccCCCCCCcCCHHHHHHHHHHHHHHHHHHHH-cCCCEEEEcccccchHHHHhCCCccCC
Confidence 0 0000 1 233455555555 58999999886433
Q ss_pred --------------HHHHHHHHHHhhc--CCCEEEEeCCCCcccccccccccCCCCChHHHHHHHHHHHHcCCeEE
Q 025860 160 --------------FISGLILIIKKVT--AKPILIYPNSGEFYDADRKEWVQNTGVSDEDFVSYVSKWCEVGASLV 219 (247)
Q Consensus 160 --------------~~~~~l~~l~~~~--~~pl~vyPNaG~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~iI 219 (247)
.+.++++.+++.. +.||++.-|....++. . .+.+++.+.++.+.+ |+.+|
T Consensus 195 R~D~yGGs~enR~r~~~ei~~avr~~~g~~~~v~~r~s~~~~~~~---g------~~~~~~~~~~~~l~~-~~d~~ 260 (690)
T 3k30_A 195 RTDEYGGSLENRMRLLRELLEDTLDECAGRAAVACRITVEEEIDG---G------ITREDIEGVLRELGE-LPDLW 260 (690)
T ss_dssp CCSTTSSSHHHHTHHHHHHHHHHHHHHTTSSEEEEEEECCCCSTT---S------CCHHHHHHHHHHHTT-SSSEE
T ss_pred CccccCCCHHHHHHHHHHHHHHHHHHhCCCceEEEEECccccCCC---C------CCHHHHHHHHHHHHh-hcCEE
Confidence 4566777777765 5789988876532211 1 234555555554433 55544
No 84
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=90.00 E-value=5.4 Score=41.24 Aligned_cols=99 Identities=14% Similarity=0.129 Sum_probs=65.8
Q ss_pred HHHHHhcCCCCEE-EEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCC----Cc---HHHHHHHHHhCCCCe
Q 025860 78 RVQVLVESAPDLI-AFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSG----DS---LLECASIAESCKRVV 149 (247)
Q Consensus 78 q~~~l~~~gvD~i-~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G----~~---~~~~~~~~~~~~~~~ 149 (247)
-++...++|+|.| +|-.+++++.++..++.+++.+ ..+-..+++.. ...++ .+ +.+.++.+.+ .|++
T Consensus 650 ~i~~a~~~g~d~irif~sl~~~~~~~~~i~~~~~~g--~~v~~~i~~~~--~~~d~~r~~~~~~~~~~~~~~~~~-~Ga~ 724 (1165)
T 2qf7_A 650 FVRQAAKGGIDLFRVFDCLNWVENMRVSMDAIAEEN--KLCEAAICYTG--DILNSARPKYDLKYYTNLAVELEK-AGAH 724 (1165)
T ss_dssp HHHHHHHHTCCEEEEECTTCCGGGGHHHHHHHHHTT--CEEEEEEECCS--CTTCTTSGGGCHHHHHHHHHHHHH-TTCS
T ss_pred HHHHHHhcCcCEEEEEeeHHHHHHHHHHHHHHHhcc--ceEEEEEEEec--cccCCCCCCCCHHHHHHHHHHHHH-cCCC
Confidence 4555666899986 4566778888888899888875 33333333221 01122 33 4455555666 5889
Q ss_pred EEEEcCC----ChhHHHHHHHHHHhhcCCCEEEEeC
Q 025860 150 SVGINCT----PPRFISGLILIIKKVTAKPILIYPN 181 (247)
Q Consensus 150 avG~NC~----~p~~~~~~l~~l~~~~~~pl~vyPN 181 (247)
.|.+-=+ .|..+..+++.+++..+.||.+...
T Consensus 725 ~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~i~~H~H 760 (1165)
T 2qf7_A 725 IIAVKDMAGLLKPAAAKVLFKALREATGLPIHFHTH 760 (1165)
T ss_dssp EEEEEETTCCCCHHHHHHHHHHHHHHCSSCEEEEEC
T ss_pred EEEEeCccCCcCHHHHHHHHHHHHHhcCCeEEEEEC
Confidence 8877643 4999999999999888888877663
No 85
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=89.93 E-value=0.28 Score=42.96 Aligned_cols=42 Identities=24% Similarity=0.228 Sum_probs=34.8
Q ss_pred HHHHHHhcCCCCEEEEec-CCCHHHHHHHHHHHHhhCCCCcEEEEE
Q 025860 77 RRVQVLVESAPDLIAFET-IPNKIEAQAYAELLEEENIKIPAWFSF 121 (247)
Q Consensus 77 ~q~~~l~~~gvD~i~~ET-~~~~~E~~aa~~~~~~~~~~~pv~is~ 121 (247)
++++++.++|+|.|++|. +++.+|++.+.+.+.. +.|+++.+
T Consensus 170 ~Ra~ay~eAGAd~i~~e~~~~~~~~~~~i~~~~~~---~vP~i~n~ 212 (290)
T 2hjp_A 170 RRGQAYEEAGADAILIHSRQKTPDEILAFVKSWPG---KVPLVLVP 212 (290)
T ss_dssp HHHHHHHHTTCSEEEECCCCSSSHHHHHHHHHCCC---SSCEEECG
T ss_pred HHHHHHHHcCCcEEEeCCCCCCHHHHHHHHHHcCC---CCCEEEec
Confidence 388999999999999999 9999999887776642 47887644
No 86
>3r89_A Orotidine 5'-phosphate decarboxylase; PSI-biology, midwest center for structural genomics, MCSG, O 5-phosphate decarboxylase, lyase; 1.84A {Anaerococcus prevotii}
Probab=89.92 E-value=1.4 Score=38.56 Aligned_cols=159 Identities=13% Similarity=0.027 Sum_probs=96.5
Q ss_pred CHHHHHHHHHHHHHHHhcCCCCEE-----EEecCC--CHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHH
Q 025860 67 TVETLKDFHRRRVQVLVESAPDLI-----AFETIP--NKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECA 139 (247)
Q Consensus 67 s~~e~~~~~~~q~~~l~~~gvD~i-----~~ET~~--~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~ 139 (247)
..+.+.+|.+..++.+.+ -|.++ +||... -+.+++..++.+++. +.+|+.-+-+.|-+ .+...++
T Consensus 41 ~~~~l~~f~~~ivd~l~~-~v~~~Kvg~~lf~~~G~~~v~~L~~~i~~~~~~--g~~VflDlK~~DIp-----nTv~~~a 112 (290)
T 3r89_A 41 VSEALFSYNKEIIDQTYD-VCAIYKLQIAYYESYGIEGMIAYRDTLSYLREK--DLLSIGDVKRSDIA-----ASAKMYA 112 (290)
T ss_dssp HHHHHHHHHHHHHHHHTT-SCSEEEEEHHHHHTTHHHHHHHHHHHHHHHHHT--TCCEEEEEEECCCH-----HHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCC-cceEEEecHHHHHhcCHHHHHHHHHHHHHHHHC--CCeEEEEecccCcH-----HHHHHHH
Confidence 357888888999998864 35554 344432 123555566677775 58999999887644 3455566
Q ss_pred HHHHh-CCCCeEEEEcCC-ChhHHHHHHHHHHhhcCCCE--EEEeCCCC--cccccccccccCCCCChHHHHHHHHHHHH
Q 025860 140 SIAES-CKRVVSVGINCT-PPRFISGLILIIKKVTAKPI--LIYPNSGE--FYDADRKEWVQNTGVSDEDFVSYVSKWCE 213 (247)
Q Consensus 140 ~~~~~-~~~~~avG~NC~-~p~~~~~~l~~l~~~~~~pl--~vyPNaG~--~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (247)
+.+.. ..++++|-++.. +.+.|.++++......+..+ .-.-|.|. ..+.. . .. ..--+...+.+.+|..
T Consensus 113 ~~~~~~~lg~D~vTvh~~~G~~~l~~~~~~a~~~~kgv~vL~~tSn~g~~d~q~~~---~-~~-g~l~~~V~~~a~~~~~ 187 (290)
T 3r89_A 113 KAHFEGDFETDFITLNPYMGMDSIEPYEEYIEKGDKGVFVLLRTSNPGAKDFEVLP---V-DG-EEFFYKVGDKMRELNE 187 (290)
T ss_dssp HHHHSGGGCCSEEEECCTTCGGGTGGGHHHHHTTSCEEEEEEECCSGGGGTTTTCE---E-TT-EETHHHHHHHHHHHHG
T ss_pred HHHhccccCCCEEEEcccCCHHHHHHHHHHHHhcCCeEEEEEeCCCCCHHHHhhcc---c-CC-CCHHHHHHHHHHHHhh
Confidence 55443 147999999997 78888888777655433221 22333331 11110 0 00 0012446667777864
Q ss_pred c--C---CeEEeecCCC-ChHHHHHHHHHhh
Q 025860 214 V--G---ASLVGGCCRT-TPNTIKGIYRTLS 238 (247)
Q Consensus 214 ~--G---~~iIGGCCGt-~P~hI~al~~~l~ 238 (247)
. | ...+|=-||. -|+.++.||+.+.
T Consensus 188 ~~~g~~~~g~~GvVvgAT~p~e~~~iR~~~~ 218 (290)
T 3r89_A 188 KYIGKSGFGPIGLVVGATHSEEVEKIRKRYD 218 (290)
T ss_dssp GGCCTTSCEEEEEEECCCCHHHHHHHHHHTT
T ss_pred hccCCCCCCceEEEECCCChHHHHHHHHhCC
Confidence 2 2 3468888884 5999999998754
No 87
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=89.90 E-value=7 Score=34.75 Aligned_cols=134 Identities=13% Similarity=0.045 Sum_probs=78.3
Q ss_pred HHHHHHHHhcCCCC-EEEEecC-----------CCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHH
Q 025860 75 HRRRVQVLVESAPD-LIAFETI-----------PNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIA 142 (247)
Q Consensus 75 ~~~q~~~l~~~gvD-~i~~ET~-----------~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~ 142 (247)
|.+-++.+.+.|+| .|-+.-- .+.+.+..+++++++.. ++|+++-++. +.+..+.++.+
T Consensus 143 ~~~~a~~l~~~g~~d~ielNisCPn~~G~~~l~~~~e~l~~il~av~~~~-~~PV~vKi~p--------~~~~~~~a~~~ 213 (345)
T 3oix_A 143 THTILXMVEASKYQGLVELNLSCPNVPGXPQIAYDFETTDQILSEVFTYF-TKPLGIKLPP--------YFDIVHFDQAA 213 (345)
T ss_dssp HHHHHHHHHHSSCCSEEEEECSCCCSTTCCCGGGCHHHHHHHHHHHTTTC-CSCEEEEECC--------CCCHHHHHHHH
T ss_pred HHHHHHHHhccCCCcEEEEecCCCCcCCchhhcCCHHHHHHHHHHHHHHh-CCCeEEEECC--------CCCHHHHHHHH
Confidence 44456666666765 8766532 35567788888888764 6899988763 23556666655
Q ss_pred HhCCCCeE-EEEcCC--------------------------Chh---HHHHHHHHHHhhc--CCCEEEEeCCCCcccccc
Q 025860 143 ESCKRVVS-VGINCT--------------------------PPR---FISGLILIIKKVT--AKPILIYPNSGEFYDADR 190 (247)
Q Consensus 143 ~~~~~~~a-vG~NC~--------------------------~p~---~~~~~l~~l~~~~--~~pl~vyPNaG~~~d~~~ 190 (247)
.. .++++ .++|++ ++. .....+.++++.. +.|| ..|+|.
T Consensus 214 ~~-aga~~i~~int~nt~g~~~~i~~~~~~~~~~~~~gGlSG~ai~p~a~~~v~~i~~~~~~~ipI--Ig~GGI------ 284 (345)
T 3oix_A 214 AI-FNXYPLTFVNCINSIGNGLVIEDETVVIXPKNGFGGIGGDYVKPTALANVHAFYKRLNPSIQI--IGTGGV------ 284 (345)
T ss_dssp HH-HTTSCCSEEEECCCEEEEECEETTEESCSGGGGEEEEEEGGGHHHHHHHHHHHHTTSCTTSEE--EEESSC------
T ss_pred HH-hCCCceEEEEeecccccceeeccCccccccccccCCcCCccccHHHHHHHHHHHHHcCCCCcE--EEECCC------
Confidence 43 12322 133432 011 1245677777765 4664 344542
Q ss_pred cccccCCCCChHHHHHHHHHHHHcCCeEEeecCC---CChHHHHHHHHHhh
Q 025860 191 KEWVQNTGVSDEDFVSYVSKWCEVGASLVGGCCR---TTPNTIKGIYRTLS 238 (247)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~G~~iIGGCCG---t~P~hI~al~~~l~ 238 (247)
.++++. .+.+..|++.|.=+-+ .+|..++.|.+.|.
T Consensus 285 --------~s~~da----~~~l~aGAd~V~igra~~~~gP~~~~~i~~~L~ 323 (345)
T 3oix_A 285 --------XTGRDA----FEHILCGASMVQIGTALHQEGPQIFKRITKELX 323 (345)
T ss_dssp --------CSHHHH----HHHHHHTCSEEEESHHHHHHCTHHHHHHHHHHH
T ss_pred --------CChHHH----HHHHHhCCCEEEEChHHHhcChHHHHHHHHHHH
Confidence 124333 3345679988876655 47888887776653
No 88
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=89.88 E-value=2.9 Score=35.20 Aligned_cols=100 Identities=13% Similarity=0.095 Sum_probs=66.1
Q ss_pred HHHHHHhcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcC--C-------CcccCCCcHHHHHHHHHhCCC
Q 025860 77 RRVQVLVESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKD--G-------VNVVSGDSLLECASIAESCKR 147 (247)
Q Consensus 77 ~q~~~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~--~-------~~l~~G~~~~~~~~~~~~~~~ 147 (247)
++++.+++.|+|-+++-|.. +..-..+-+++++++ +..+++++.+.. + .+..++.++.+.++.+.+ .+
T Consensus 88 e~~~~~l~~GadkVii~t~a-~~~p~li~e~~~~~g-~q~iv~~iD~~~~~~~~v~~~gw~~~~~~~~~~~~~~~~~-~g 164 (243)
T 4gj1_A 88 EEVKALLDCGVKRVVIGSMA-IKDATLCLEILKEFG-SEAIVLALDTILKEDYVVAVNAWQEASDKKLMEVLDFYSN-KG 164 (243)
T ss_dssp HHHHHHHHTTCSEEEECTTT-TTCHHHHHHHHHHHC-TTTEEEEEEEEESSSEEEC--------CCBHHHHHHHHHT-TT
T ss_pred HHHHHHHHcCCCEEEEcccc-ccCCchHHHHHhccc-CceEEEEEEEEeCCCCEEEecCceecccchHHHHHHHHhh-cC
Confidence 46777888999999998754 333445556777776 567888888632 1 233466788899988876 58
Q ss_pred CeEEEEcCCChhHH-----HHHHHHHHhhc-CCCEEEE
Q 025860 148 VVSVGINCTPPRFI-----SGLILIIKKVT-AKPILIY 179 (247)
Q Consensus 148 ~~avG~NC~~p~~~-----~~~l~~l~~~~-~~pl~vy 179 (247)
+.-|-+|+.+-+.+ .++++.+.+.. +.|+++-
T Consensus 165 ~~eil~t~Id~DGt~~G~d~~l~~~l~~~~~~ipvias 202 (243)
T 4gj1_A 165 LKHILCTDISKDGTMQGVNVRLYKLIHEIFPNICIQAS 202 (243)
T ss_dssp CCEEEEEETTC-----CCCHHHHHHHHHHCTTSEEEEE
T ss_pred CcEEEeeeecccccccCCCHHHHHHHHHhcCCCCEEEE
Confidence 88888987532211 45777777764 6787653
No 89
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=89.65 E-value=4.7 Score=34.29 Aligned_cols=107 Identities=16% Similarity=0.177 Sum_probs=68.3
Q ss_pred CCHHHHHHHHHHHHHHHhcCC-CCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHh
Q 025860 66 ITVETLKDFHRRRVQVLVESA-PDLIAFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAES 144 (247)
Q Consensus 66 ~s~~e~~~~~~~q~~~l~~~g-vD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~ 144 (247)
.+.++..+. ++.+++.| +|++=+|-...- ..+.+++.+++. +..+++|+.-.+. +++-+.+.+.+..+..
T Consensus 97 ~~~~~~~~l----l~~~~~~g~~d~iDvEl~~~~-~~~~l~~~~~~~--~~kvI~S~Hdf~~--tP~~~el~~~~~~~~~ 167 (257)
T 2yr1_A 97 LNEAEVRRL----IEAICRSGAIDLVDYELAYGE-RIADVRRMTEEC--SVWLVVSRHYFDG--TPRKETLLADMRQAER 167 (257)
T ss_dssp SCHHHHHHH----HHHHHHHTCCSEEEEEGGGTT-HHHHHHHHHHHT--TCEEEEEEEESSC--CCCHHHHHHHHHHHHH
T ss_pred CCHHHHHHH----HHHHHHcCCCCEEEEECCCCh-hHHHHHHHHHhC--CCEEEEEecCCCC--CcCHHHHHHHHHHHHh
Confidence 455554444 44445556 999999965443 666677766664 5899999974322 2233334555555555
Q ss_pred CCCCeEEEEcCC--ChhHHHHHHHHHH---hhcCCCEEEEeCC
Q 025860 145 CKRVVSVGINCT--PPRFISGLILIIK---KVTAKPILIYPNS 182 (247)
Q Consensus 145 ~~~~~avG~NC~--~p~~~~~~l~~l~---~~~~~pl~vyPNa 182 (247)
.++|.+=+-+. +++....+++... ...+.|++.+.-+
T Consensus 168 -~gaDivKia~~a~s~~D~l~ll~~~~~~~~~~~~P~I~~~MG 209 (257)
T 2yr1_A 168 -YGADIAKVAVMPKSPEDVLVLLQATEEARRELAIPLITMAMG 209 (257)
T ss_dssp -TTCSEEEEEECCSSHHHHHHHHHHHHHHHHHCSSCEEEEECT
T ss_pred -cCCCEEEEEeccCCHHHHHHHHHHHHHHhccCCCCEEEEECC
Confidence 58888877775 5777777776443 3357899888655
No 90
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=89.24 E-value=6.9 Score=34.79 Aligned_cols=81 Identities=14% Similarity=0.036 Sum_probs=54.8
Q ss_pred CCCcEEEEEEEcCCCcccCCCcHHH---HHHHHHhCCCCe-EEEEcCCC------------hhHHHHHHHHHHhhcCCCE
Q 025860 113 IKIPAWFSFNSKDGVNVVSGDSLLE---CASIAESCKRVV-SVGINCTP------------PRFISGLILIIKKVTAKPI 176 (247)
Q Consensus 113 ~~~pv~is~~~~~~~~l~~G~~~~~---~~~~~~~~~~~~-avG~NC~~------------p~~~~~~l~~l~~~~~~pl 176 (247)
.+.|+++++. |.++++ +++.+.+ .+.+ +|=+|+++ |+.+.++++.+++..++||
T Consensus 127 ~~~pvivsI~---------g~~~~d~~~~a~~l~~-~g~~d~ielNisCPn~~G~~~l~~~~e~l~~il~av~~~~~~PV 196 (345)
T 3oix_A 127 DSKNHFLSLV---------GMSPEETHTILXMVEA-SKYQGLVELNLSCPNVPGXPQIAYDFETTDQILSEVFTYFTKPL 196 (345)
T ss_dssp TCCCCEEEEC---------CSSHHHHHHHHHHHHH-SSCCSEEEEECSCCCSTTCCCGGGCHHHHHHHHHHHTTTCCSCE
T ss_pred CCCCEEEEec---------CCCHHHHHHHHHHHhc-cCCCcEEEEecCCCCcCCchhhcCCHHHHHHHHHHHHHHhCCCe
Confidence 3689999983 555554 4555544 3455 99999863 5677888888888888999
Q ss_pred EEEeCCCCcccccccccccCCCCChHHHHHHHHHHHHcCCeE
Q 025860 177 LIYPNSGEFYDADRKEWVQNTGVSDEDFVSYVSKWCEVGASL 218 (247)
Q Consensus 177 ~vyPNaG~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~i 218 (247)
+|.--.+ .+..++++.+......|+.+
T Consensus 197 ~vKi~p~---------------~~~~~~a~~~~~aga~~i~~ 223 (345)
T 3oix_A 197 GIKLPPY---------------FDIVHFDQAAAIFNXYPLTF 223 (345)
T ss_dssp EEEECCC---------------CCHHHHHHHHHHHTTSCCSE
T ss_pred EEEECCC---------------CCHHHHHHHHHHhCCCceEE
Confidence 8775321 13566777777666666654
No 91
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=89.15 E-value=6.3 Score=34.84 Aligned_cols=151 Identities=13% Similarity=0.024 Sum_probs=93.0
Q ss_pred CCHHH---HHHHHHHHHHHHhcCCCCEEEEecCC---------------------CH-HHH---HHHHHHHHhh-CCCCc
Q 025860 66 ITVET---LKDFHRRRVQVLVESAPDLIAFETIP---------------------NK-IEA---QAYAELLEEE-NIKIP 116 (247)
Q Consensus 66 ~s~~e---~~~~~~~q~~~l~~~gvD~i~~ET~~---------------------~~-~E~---~aa~~~~~~~-~~~~p 116 (247)
+|.+| +.+.|.+.++.+.++|.|.|=+---. ++ ..+ ..+++++++. +.+.|
T Consensus 142 mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~avG~d~p 221 (349)
T 3hgj_A 142 LDEAGMERILQAFVEGARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVPRELP 221 (349)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSCTTSC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHhcCCce
Confidence 56555 55678888888888999998443221 11 123 3455555554 45689
Q ss_pred EEEEEEEcCCCcccCCCcHHHHH---HHHHhCCCCeEEEEcCC----------ChhHHHHHHHHHHhhcCCCEEEEeCCC
Q 025860 117 AWFSFNSKDGVNVVSGDSLLECA---SIAESCKRVVSVGINCT----------PPRFISGLILIIKKVTAKPILIYPNSG 183 (247)
Q Consensus 117 v~is~~~~~~~~l~~G~~~~~~~---~~~~~~~~~~avG~NC~----------~p~~~~~~l~~l~~~~~~pl~vyPNaG 183 (247)
|.+-++..+. ...|.++++.+ +.+.+ .+++.|-+-.. .+..-...++.+++..+.|+++ |.|
T Consensus 222 V~vRls~~~~--~~~g~~~~~~~~la~~L~~-~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~--~Gg 296 (349)
T 3hgj_A 222 LFVRVSATDW--GEGGWSLEDTLAFARRLKE-LGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRVGLRTGA--VGL 296 (349)
T ss_dssp EEEEEESCCC--STTSCCHHHHHHHHHHHHH-TTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHHHCCEEEE--CSS
T ss_pred EEEEeccccc--cCCCCCHHHHHHHHHHHHH-cCCCEEEEecCCcCcccccCCCccccHHHHHHHHHHcCceEEE--ECC
Confidence 9998886542 23566666644 44445 58898887652 1323456778888777888653 333
Q ss_pred CcccccccccccCCCCChHHHHHHHHHHHHcC-CeEEeecCC--CChHHHHHHHHHhhC
Q 025860 184 EFYDADRKEWVQNTGVSDEDFVSYVSKWCEVG-ASLVGGCCR--TTPNTIKGIYRTLSN 239 (247)
Q Consensus 184 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G-~~iIGGCCG--t~P~hI~al~~~l~~ 239 (247)
. .+++ .+.+.++.| +.+|+=+=. ..|+-.+.+++.+..
T Consensus 297 i--------------~t~e----~a~~~l~~G~aD~V~iGR~~lanPdl~~k~~~~l~~ 337 (349)
T 3hgj_A 297 I--------------TTPE----QAETLLQAGSADLVLLGRVLLRDPYFPLRAAKALGV 337 (349)
T ss_dssp C--------------CCHH----HHHHHHHTTSCSEEEESTHHHHCTTHHHHHHHHTTC
T ss_pred C--------------CCHH----HHHHHHHCCCceEEEecHHHHhCchHHHHHHHHCCC
Confidence 2 1243 344567777 888874433 478888888877754
No 92
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=89.13 E-value=6.3 Score=35.29 Aligned_cols=87 Identities=14% Similarity=0.117 Sum_probs=53.2
Q ss_pred CCcEEEEEEEcCCCcccCCCcHHHHHHHHHh-CCCCeEEEEcCCCh-----------hHHHHHHHHHHhh-------cCC
Q 025860 114 KIPAWFSFNSKDGVNVVSGDSLLECASIAES-CKRVVSVGINCTPP-----------RFISGLILIIKKV-------TAK 174 (247)
Q Consensus 114 ~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~-~~~~~avG~NC~~p-----------~~~~~~l~~l~~~-------~~~ 174 (247)
+.|+.+++.-+. . +..++++.++.+.. ...+++|=+|+++| +.+.++++.+++. .+.
T Consensus 146 ~~pv~vniggn~--~--t~~~~~dy~~~~~~~~~~ad~ielNisCPn~~G~~~l~~~~~l~~ll~av~~~~~~~~~~~~~ 221 (367)
T 3zwt_A 146 GLPLGVNLGKNK--T--SVDAAEDYAEGVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDGLRRVHRP 221 (367)
T ss_dssp TCCEEEEECCCT--T--CSCHHHHHHHHHHHHGGGCSEEEEECCCTTSTTGGGGGSHHHHHHHHHHHHHHHHTSCGGGCC
T ss_pred CceEEEEEecCC--C--CCcCHHHHHHHHHHHhhhCCEEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHhhccccCCc
Confidence 579999993211 1 13455554443322 12579999999864 4456677766543 578
Q ss_pred CEEEEeCCCCcccccccccccCCCCChHHHHHHHHHHHHcCCeEE
Q 025860 175 PILIYPNSGEFYDADRKEWVQNTGVSDEDFVSYVSKWCEVGASLV 219 (247)
Q Consensus 175 pl~vyPNaG~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~iI 219 (247)
||+|.-..+ .+.+++.+.++...+.|+..|
T Consensus 222 Pv~vKi~p~---------------~~~~~~~~ia~~~~~aGadgi 251 (367)
T 3zwt_A 222 AVLVKIAPD---------------LTSQDKEDIASVVKELGIDGL 251 (367)
T ss_dssp EEEEEECSC---------------CCHHHHHHHHHHHHHHTCCEE
T ss_pred eEEEEeCCC---------------CCHHHHHHHHHHHHHcCCCEE
Confidence 988875332 234567777777778887644
No 93
>1pv8_A Delta-aminolevulinic acid dehydratase; porphobilinogen synthase, tetrapyrrole biosynthesis, reactio intermediate, lyase; HET: PB1; 2.20A {Homo sapiens} SCOP: c.1.10.3 PDB: 1e51_A* 2z0i_A 2z1b_A
Probab=88.93 E-value=6.8 Score=34.57 Aligned_cols=173 Identities=13% Similarity=0.126 Sum_probs=98.4
Q ss_pred CeEEEEe--cCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCEEEEecCCCHHHHHHHHHHHHhhCC-C
Q 025860 38 PILVAAS--VGSYGAYLADGSEYSGNYGDAITVETLKDFHRRRVQVLVESAPDLIAFETIPNKIEAQAYAELLEEENI-K 114 (247)
Q Consensus 38 ~~~VaGs--iGP~g~~l~~g~eY~g~y~~~~s~~e~~~~~~~q~~~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~-~ 114 (247)
...|..+ +.||-..-++|--... ..+.-++-.+.+.+|+-...++|+|++.==-|.+- .+.++.+++.+.+. +
T Consensus 114 dl~vitDvcLc~YT~HGHcGil~~~---g~v~ND~Tl~~La~~Als~A~AGAdiVAPSdMMDG-rV~aIR~aLd~~G~~~ 189 (330)
T 1pv8_A 114 NLLVACDVCLCPYTSHGHCGLLSEN---GAFRAEESRQRLAEVALAYAKAGCQVVAPSDMMDG-RVEAIKEALMAHGLGN 189 (330)
T ss_dssp TSEEEEEECCC------------------CHHHHHHHHHHHHHHHHHHHHTCSEEEECC--CC-HHHHHHHHHHHTTCTT
T ss_pred CeEEEEeeecccccCCCceeEECCC---CcCccHHHHHHHHHHHHHHHHcCCCeeeccccccc-HHHHHHHHHHhCCCcC
Confidence 3566665 4555444333321000 11456777777888888889999999986555544 35667777777653 3
Q ss_pred CcEEEEEEEcC-------------------C--CcccCCCcHHHHHHHHH--hCCCCeEEEEcCCChhHHHHHHHHHHhh
Q 025860 115 IPAWFSFNSKD-------------------G--VNVVSGDSLLECASIAE--SCKRVVSVGINCTPPRFISGLILIIKKV 171 (247)
Q Consensus 115 ~pv~is~~~~~-------------------~--~~l~~G~~~~~~~~~~~--~~~~~~avG~NC~~p~~~~~~l~~l~~~ 171 (247)
+--++|.+.+- + ....+--.-.++++.+. -..|+|.|-|-=.-|. +.+++.+++.
T Consensus 190 ~v~ImsYsaKyASafYGPFRdAa~Sap~~GDRktYQmdpaN~~EAlre~~~Di~EGAD~vMVKPal~Y--LDIi~~vk~~ 267 (330)
T 1pv8_A 190 RVSVMSYSAKFASCFYGPFRDAAKSSPAFGDRRCYQLPPGARGLALRAVDRDVREGADMLMVKPGMPY--LDIVREVKDK 267 (330)
T ss_dssp TCEEBCCCEECCCGGGHHHHHCC-------------CCTTCHHHHHHHHHHHHHTTCSBEEEESCGGG--HHHHHHHHHH
T ss_pred CceEeehhHHHhHhhhhHHHHHHhcCCCCCCccccCCCCCCHHHHHHHHHhhHHhCCceEEEecCccH--HHHHHHHHHh
Confidence 12333554331 1 11122223344544442 1358999988776443 6778888888
Q ss_pred c-CCCEEEEeCCCC---cccccccccccCCCCChHHHHHHHHHHHHcCCeEEe
Q 025860 172 T-AKPILIYPNSGE---FYDADRKEWVQNTGVSDEDFVSYVSKWCEVGASLVG 220 (247)
Q Consensus 172 ~-~~pl~vyPNaG~---~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~iIG 220 (247)
. +.|+.+|--+|+ ......+.|... ..-+.+....++.+|+.+|=
T Consensus 268 ~p~~P~aaYqVSGEYAMikaAa~~GwiD~----~~~v~Esl~~~kRAGAd~Ii 316 (330)
T 1pv8_A 268 HPDLPLAVYHVSGEFAMLWHGAQAGAFDL----KAAVLEAMTAFRRAGADIII 316 (330)
T ss_dssp STTSCEEEEECHHHHHHHHHHHHTTSSCH----HHHHHHHHHHHHHHTCSEEE
T ss_pred cCCCCeEEEEcCcHHHHHHHHHHcCCccH----HHHHHHHHHHHHhcCCCEEe
Confidence 8 999999999996 222223567542 23466777888899998873
No 94
>1zuw_A Glutamate racemase 1; (R)-glutamate, peptidoglycan biosynthesi isomerase; HET: DGL; 1.75A {Bacillus subtilis}
Probab=88.92 E-value=6.1 Score=33.64 Aligned_cols=150 Identities=12% Similarity=0.076 Sum_probs=79.0
Q ss_pred CCHHHHHHHHHHHHHHHhc-CCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHh
Q 025860 66 ITVETLKDFHRRRVQVLVE-SAPDLIAFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAES 144 (247)
Q Consensus 66 ~s~~e~~~~~~~q~~~l~~-~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~ 144 (247)
.+.+++.++-.+.++.|.+ .|+|+|++=+.+.- ..+++.+++.. ++||+ |. ++.+++.+..
T Consensus 45 ~s~~~i~~~~~~~~~~L~~~~g~d~iViACNTas---~~~l~~lr~~~-~iPVi-------------gi-iepa~~~A~~ 106 (272)
T 1zuw_A 45 RPEEEVLQYTWELTNYLLENHHIKMLVIACNTAT---AIALDDIQRSV-GIPVV-------------GV-IQPGARAAIK 106 (272)
T ss_dssp SCHHHHHHHHHHHHHHHHHHSCCSEEEECCHHHH---HHHHHHHHHHC-SSCEE-------------ES-HHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhhcCCCEEEEeCchhh---HHHHHHHHHHC-CCCEE-------------cc-cHHHHHHHHH
Confidence 4789999999999999999 99999998543321 12466677654 68877 21 2333333222
Q ss_pred CCCCeEEEEcCCCh----hHHHHHHHHHHhhcCCCEEEEeCCCCcccccccccccCCCCChHHHHHHHHHHHHcCCeE-E
Q 025860 145 CKRVVSVGINCTPP----RFISGLILIIKKVTAKPILIYPNSGEFYDADRKEWVQNTGVSDEDFVSYVSKWCEVGASL-V 219 (247)
Q Consensus 145 ~~~~~avG~NC~~p----~~~~~~l~~l~~~~~~pl~vyPNaG~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~i-I 219 (247)
..+..-||+=.+.. .....+++... .+.-+...|..+....-. ..+... ....+.+.++.+.+.+.|+.. |
T Consensus 107 ~~~~~rIgVlaT~~T~~s~~y~~~i~~~~--~~~~v~~~~~~~~v~~ve-~g~~~~-~~~~~~l~~~l~~l~~~~~D~iV 182 (272)
T 1zuw_A 107 VTDNQHIGVIGTENTIKSNAYEEALLALN--PDLKVENLACPLLVPFVE-SGKFLD-QTADEIVKTSLYPLKDTSIDSLI 182 (272)
T ss_dssp HCSSSEEEEEECHHHHHTTHHHHHHHHHC--TTCEEEEEECTTHHHHHT-SCCCCH-HHHHHHHHHHHHHHHHSCCSEEE
T ss_pred hcCCCEEEEEEChhhhhhhHHHHHHHHhC--CCCEEEeccCHHHHHHHH-CCCCCC-HHHHHHHHHHHHHHHhcCCCEEE
Confidence 12345677766632 23344444331 133344455544321111 111100 011234666777787777654 3
Q ss_pred eecCCCChHHHHHHHHHhh
Q 025860 220 GGCCRTTPNTIKGIYRTLS 238 (247)
Q Consensus 220 GGCCGt~P~hI~al~~~l~ 238 (247)
=||-. -|--...+.+.+.
T Consensus 183 LGCTh-~pll~~~i~~~~~ 200 (272)
T 1zuw_A 183 LGCTH-YPILKEAIQRYMG 200 (272)
T ss_dssp EESTT-GGGGHHHHHHHHC
T ss_pred ECccC-HHHHHHHHHHHcC
Confidence 34544 3434455555443
No 95
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=88.89 E-value=10 Score=33.98 Aligned_cols=79 Identities=11% Similarity=0.005 Sum_probs=49.2
Q ss_pred cHHHHHHHHHhCCCCeEEEEcCCC---------h-----------------hHHHHHHHHHHhhcC-CCEEEEeCCCCcc
Q 025860 134 SLLECASIAESCKRVVSVGINCTP---------P-----------------RFISGLILIIKKVTA-KPILIYPNSGEFY 186 (247)
Q Consensus 134 ~~~~~~~~~~~~~~~~avG~NC~~---------p-----------------~~~~~~l~~l~~~~~-~pl~vyPNaG~~~ 186 (247)
.+.++++.+.+ .|.|+|=|||.+ | ..+.++++.+++... .||++.-+.+..+
T Consensus 168 ~f~~AA~~a~~-aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~V~vrls~~~~~ 246 (376)
T 1icp_A 168 EFRVAARNAIE-AGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRCRFALEIVEAVANEIGSDRVGIRISPFAHY 246 (376)
T ss_dssp HHHHHHHHHHH-TTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCT
T ss_pred HHHHHHHHHHH-cCCCEEEEcCccchhhhhccCCcccCCCCccCccHHHhHHHHHHHHHHHHHHhcCCceEEEecccccc
Confidence 34455655555 589999999964 1 225666677777653 2999988875322
Q ss_pred cccccccccCCCCChHHHHHHHHHHHHcCCeEE
Q 025860 187 DADRKEWVQNTGVSDEDFVSYVSKWCEVGASLV 219 (247)
Q Consensus 187 d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~iI 219 (247)
++. .. ..+.+++.+.++.+.+.|+.+|
T Consensus 247 ~g~----~~--~~~~~~~~~la~~le~~Gvd~i 273 (376)
T 1icp_A 247 NEA----GD--TNPTALGLYMVESLNKYDLAYC 273 (376)
T ss_dssp TTC----CC--SCHHHHHHHHHHHHGGGCCSEE
T ss_pred CCC----CC--CCCHHHHHHHHHHHHHcCCCEE
Confidence 211 00 1234567777777778887766
No 96
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=88.86 E-value=3 Score=36.07 Aligned_cols=137 Identities=15% Similarity=0.056 Sum_probs=73.6
Q ss_pred HHHHHHHHHhcCCCC---EEEEec-----------CCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHH
Q 025860 74 FHRRRVQVLVESAPD---LIAFET-----------IPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECA 139 (247)
Q Consensus 74 ~~~~q~~~l~~~gvD---~i~~ET-----------~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~ 139 (247)
.|.+.++.+.++|+| +|-+-- ..+.+.+..+++.+++.. ++|+++-++.. + +-+.+.+++
T Consensus 107 ~~~~~a~~~~~~g~d~~~~iein~~~P~~~g~~~~g~~~~~~~~ii~~vr~~~-~~Pv~vK~~~~----~-~~~~~~~~a 180 (314)
T 2e6f_A 107 ENVAMVRRLAPVAQEKGVLLELNLSCPNVPGKPQVAYDFEAMRTYLQQVSLAY-GLPFGVKMPPY----F-DIAHFDTAA 180 (314)
T ss_dssp HHHHHHHHHHHHHHHHCCEEEEECCCCCSTTCCCGGGSHHHHHHHHHHHHHHH-CSCEEEEECCC----C-CHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCcCceEEEEcCCCCCCCchhhcCCHHHHHHHHHHHHHhc-CCCEEEEECCC----C-CHHHHHHHH
Confidence 355566667777788 665432 115556666777777653 57888766421 1 112344446
Q ss_pred HHHHhCCC-CeEEEEcCC--------------------------Ch---hHHHHHHHHHHhhc-CCCEEEEeCCCCcccc
Q 025860 140 SIAESCKR-VVSVGINCT--------------------------PP---RFISGLILIIKKVT-AKPILIYPNSGEFYDA 188 (247)
Q Consensus 140 ~~~~~~~~-~~avG~NC~--------------------------~p---~~~~~~l~~l~~~~-~~pl~vyPNaG~~~d~ 188 (247)
+.+.+ .+ +++|-+-.+ ++ ......++.+++.. +.|+ ..|+|.
T Consensus 181 ~~~~~-aG~~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~sg~~~~p~~~~~i~~v~~~~~~ipv--i~~GGI---- 253 (314)
T 2e6f_A 181 AVLNE-FPLVKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLGGKYILPTALANVNAFYRRCPDKLV--FGCGGV---- 253 (314)
T ss_dssp HHHHT-CTTEEEEEECCCEEEEECEETTTTEESCCGGGGEEEEESGGGHHHHHHHHHHHHHHCTTSEE--EEESSC----
T ss_pred HHHHh-cCCceEEEEeCCCCccccccCCCCCcccccCcCCCccCcccccHHHHHHHHHHHHhcCCCCE--EEECCC----
Confidence 55555 57 777633221 11 12246666676665 6664 445542
Q ss_pred cccccccCCCCChHHHHHHHHHHHHcCCeEEeecCC---CChHHHHHHHHHh
Q 025860 189 DRKEWVQNTGVSDEDFVSYVSKWCEVGASLVGGCCR---TTPNTIKGIYRTL 237 (247)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~iIGGCCG---t~P~hI~al~~~l 237 (247)
.++++. .+++..|++.|+=+-+ -+|..++.+.+.+
T Consensus 254 ----------~~~~da----~~~l~~GAd~V~ig~~~l~~~p~~~~~i~~~l 291 (314)
T 2e6f_A 254 ----------YSGEDA----FLHILAGASMVQVGTALQEEGPGIFTRLEDEL 291 (314)
T ss_dssp ----------CSHHHH----HHHHHHTCSSEEECHHHHHHCTTHHHHHHHHH
T ss_pred ----------CCHHHH----HHHHHcCCCEEEEchhhHhcCcHHHHHHHHHH
Confidence 123333 3344567777754433 3677776666544
No 97
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=88.67 E-value=7 Score=34.05 Aligned_cols=162 Identities=15% Similarity=0.148 Sum_probs=83.6
Q ss_pred CeEEEEecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCEEEEecCC---------CHHHHHHHH---
Q 025860 38 PILVAASVGSYGAYLADGSEYSGNYGDAITVETLKDFHRRRVQVLVESAPDLIAFETIP---------NKIEAQAYA--- 105 (247)
Q Consensus 38 ~~~VaGsiGP~g~~l~~g~eY~g~y~~~~s~~e~~~~~~~q~~~l~~~gvD~i~~ET~~---------~~~E~~aa~--- 105 (247)
+.+|.|-+=-+...+.||..| .+.+.+.+ +++.+++.|+|+|=+-..+ .-+|++-++
T Consensus 39 ~~~iMgilNvTPDSFsdgg~~-------~~~~~a~~----~a~~~v~~GAdiIDIGgeStrPga~~v~~~eE~~RvvpvI 107 (297)
T 1tx2_A 39 KTLIMGILNVTPDSFSDGGSY-------NEVDAAVR----HAKEMRDEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMI 107 (297)
T ss_dssp SCEEEEECCCCCCTTCSSCBH-------HHHHHHHH----HHHHHHHTTCSEEEEESCC----CCCCCHHHHHHHHHHHH
T ss_pred CCEEEEEEeCCCCccccCCcc-------CCHHHHHH----HHHHHHHcCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHH
Confidence 457777776666666665432 13344444 6677778999999766333 267777666
Q ss_pred HHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEEcCCC----hhHHHHHHHHHHhhcCCCEEEEeC
Q 025860 106 ELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGINCTP----PRFISGLILIIKKVTAKPILIYPN 181 (247)
Q Consensus 106 ~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~NC~~----p~~~~~~l~~l~~~~~~pl~vyPN 181 (247)
+.+++.. ++|+ |+.. ...+ +++...+. |++.| |-.. .+.|.+++.. .+.|+++.++
T Consensus 108 ~~l~~~~-~vpi--SIDT---------~~~~-V~~aAl~a-Ga~iI--Ndvsg~~~d~~m~~~aa~----~g~~vVlmh~ 167 (297)
T 1tx2_A 108 QAVSKEV-KLPI--SIDT---------YKAE-VAKQAIEA-GAHII--NDIWGAKAEPKIAEVAAH----YDVPIILMHN 167 (297)
T ss_dssp HHHHHHS-CSCE--EEEC---------SCHH-HHHHHHHH-TCCEE--EETTTTSSCTHHHHHHHH----HTCCEEEECC
T ss_pred HHHHhcC-CceE--EEeC---------CCHH-HHHHHHHc-CCCEE--EECCCCCCCHHHHHHHHH----hCCcEEEEeC
Confidence 4444432 4554 5532 1222 33333332 55544 5431 2334444332 3689999998
Q ss_pred CCCcc-cccccccccCCCCChHHHHHHHHHHHHcCCe---EEeec---CCCChHHHHHHHHHh
Q 025860 182 SGEFY-DADRKEWVQNTGVSDEDFVSYVSKWCEVGAS---LVGGC---CRTTPNTIKGIYRTL 237 (247)
Q Consensus 182 aG~~~-d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~---iIGGC---CGt~P~hI~al~~~l 237 (247)
.|.+. +. . ... --+.+.+.+....+.|+. ||=-. -|.+.+|--.+-+.+
T Consensus 168 ~G~p~y~d---~-v~e---v~~~l~~~i~~a~~~GI~~~~IilDPg~Gfgk~~~~n~~ll~~l 223 (297)
T 1tx2_A 168 RDNMNYRN---L-MAD---MIADLYDSIKIAKDAGVRDENIILDPGIGFAKTPEQNLEAMRNL 223 (297)
T ss_dssp CSCCCCSS---H-HHH---HHHHHHHHHHHHHHTTCCGGGEEEECCTTSSCCHHHHHHHHHTG
T ss_pred CCCCCcch---H-HHH---HHHHHHHHHHHHHHcCCChhcEEEeCCCCcCCCHHHHHHHHHHH
Confidence 77532 11 0 000 023455666677778876 43111 145566544443333
No 98
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=88.44 E-value=10 Score=32.60 Aligned_cols=151 Identities=13% Similarity=0.133 Sum_probs=83.9
Q ss_pred CHHHHHHHHHHHHHHHhcCCCCEE-----EEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCC-CcccCCC--cHHHH
Q 025860 67 TVETLKDFHRRRVQVLVESAPDLI-----AFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDG-VNVVSGD--SLLEC 138 (247)
Q Consensus 67 s~~e~~~~~~~q~~~l~~~gvD~i-----~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~-~~l~~G~--~~~~~ 138 (247)
+.+++.. +++.+.+.|+|++ +++...+.+++...+..+|+...++|+++++-...+ |.. .+. .-.+.
T Consensus 50 ~~~e~~~----~~~~~~~~gaD~VElRvD~l~~~~~~~~v~~~l~~lr~~~~~~PiI~T~Rt~~eGG~~-~~~~~~~~~l 124 (276)
T 3o1n_A 50 TITDVKS----EALAYREADFDILEWRVDHFANVTTAESVLEAAGAIREIITDKPLLFTFRSAKEGGEQ-ALTTGQYIDL 124 (276)
T ss_dssp SHHHHHH----HHHHHTTSCCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHCCSSCEEEECCBGGGTCSB-CCCHHHHHHH
T ss_pred CHHHHHH----HHHHHhhCCCCEEEEEeccccccCcHHHHHHHHHHHHHhcCCCCEEEEEEEhhhCCCC-CCCHHHHHHH
Confidence 5566555 6666667899988 456666667788888888876436999999876543 333 232 12223
Q ss_pred HHHHHhCCCCeEEEEcCC-ChhHHHHHHHHHHhhcCCCEEE-EeCCCCcccccccccccCCCCChHHHHHHHHHHHHcCC
Q 025860 139 ASIAESCKRVVSVGINCT-PPRFISGLILIIKKVTAKPILI-YPNSGEFYDADRKEWVQNTGVSDEDFVSYVSKWCEVGA 216 (247)
Q Consensus 139 ~~~~~~~~~~~avG~NC~-~p~~~~~~l~~l~~~~~~pl~v-yPNaG~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 216 (247)
.+.+.....++.|=|-=. +.+.+..+++..++. +..+++ |=|-.. ..+.+++.+...+..+.|+
T Consensus 125 l~~~l~~g~~dyIDvEl~~~~~~~~~l~~~a~~~-~~kvI~S~Hdf~~-------------tP~~~el~~~~~~~~~~Ga 190 (276)
T 3o1n_A 125 NRAAVDSGLVDMIDLELFTGDDEVKATVGYAHQH-NVAVIMSNHDFHK-------------TPAAEEIVQRLRKMQELGA 190 (276)
T ss_dssp HHHHHHHTCCSEEEEEGGGCHHHHHHHHHHHHHT-TCEEEEEEEESSC-------------CCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHhcCCCCEEEEECcCCHHHHHHHHHHHHhC-CCEEEEEeecCCC-------------CcCHHHHHHHHHHHHHcCC
Confidence 333333222788777765 344555555544433 344433 322111 0123567777777777786
Q ss_pred eEEee-cCCCChHHHHHHHHH
Q 025860 217 SLVGG-CCRTTPNTIKGIYRT 236 (247)
Q Consensus 217 ~iIGG-CCGt~P~hI~al~~~ 236 (247)
.|+== +--.++++.-.|-+.
T Consensus 191 DIvKia~~a~s~~Dvl~Ll~~ 211 (276)
T 3o1n_A 191 DIPKIAVMPQTKADVLTLLTA 211 (276)
T ss_dssp SEEEEEECCSSHHHHHHHHHH
T ss_pred CEEEEEecCCChHHHHHHHHH
Confidence 55322 223455555554433
No 99
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=88.42 E-value=12 Score=32.69 Aligned_cols=142 Identities=11% Similarity=0.080 Sum_probs=79.9
Q ss_pred HHHHHHHHHHHHhcCCCCEE-EEecCC-----CHHHHHHHH-----HHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHH
Q 025860 71 LKDFHRRRVQVLVESAPDLI-AFETIP-----NKIEAQAYA-----ELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECA 139 (247)
Q Consensus 71 ~~~~~~~q~~~l~~~gvD~i-~~ET~~-----~~~E~~aa~-----~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~ 139 (247)
+.+...+.++..+++|+|.| ++++.. +.+..+..+ +.++..+ +.|+ +-| | |. ....+
T Consensus 188 i~~~~~~~~~~qi~aGad~i~i~D~~a~~~~lsp~~f~~f~~p~~k~i~~~~~-~~~i-ih~-~--------g~-~~~~l 255 (348)
T 4ay7_A 188 ATEASIIYANAMVEAGADVIAIADPVASPDLMSPDSFRQFLKSRLQKFASSVN-SVTV-LHI-C--------GN-VNPIL 255 (348)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEEECGGGSTTTSCHHHHHHHHHHHHHHHHHHSS-SEEE-EEC-C--------SC-CHHHH
T ss_pred HHHHHHHHHHHHHhcCCCcceeeccccccccCCHHHHHHHhhHHHHHHHhhcc-CCcE-EEe-c--------CC-cHHHH
Confidence 34444555666677999977 667644 345544322 2233332 3333 222 1 21 13355
Q ss_pred HHHHhCCCCeEEEEcCC-ChhHHHHHHHHHHhhcCCCEEEEeCCCCcccccccccccCCCCChHHHHHHHHHHHHcCCeE
Q 025860 140 SIAESCKRVVSVGINCT-PPRFISGLILIIKKVTAKPILIYPNSGEFYDADRKEWVQNTGVSDEDFVSYVSKWCEVGASL 218 (247)
Q Consensus 140 ~~~~~~~~~~avG~NC~-~p~~~~~~l~~l~~~~~~pl~vyPNaG~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~i 218 (247)
..+.+ .+++++++--. .+ ++..++..+..+.++-|--.. ..+.. -++++..+.+++.++.|..|
T Consensus 256 ~~~~~-~g~d~i~~d~~~~~------~~~~k~~~g~~~~l~Gnldp~------~~l~~--g~~e~i~~~v~~~l~~~g~I 320 (348)
T 4ay7_A 256 SDMAD-CGFEGLSVEEKIGS------AKKGKEVIGTRARLVGNVSSP------FTLLP--GPVDKIKAEAKEALEGGIDV 320 (348)
T ss_dssp HHHHT-SCCSEEECCGGGCC------HHHHHHHHTTSSEEEEEECCC------CCCTT--CCHHHHHHHHHHHHHTTCSE
T ss_pred HHHHH-hccccccccchhhH------HHHHHHHhCCCEEEEcCCCCh------HhhcC--CCHHHHHHHHHHHHhCCCCE
Confidence 56666 58898886422 11 122222223334455553210 01111 25788999999999988889
Q ss_pred EeecCC----CChHHHHHHHHHhhC
Q 025860 219 VGGCCR----TTPNTIKGIYRTLSN 239 (247)
Q Consensus 219 IGGCCG----t~P~hI~al~~~l~~ 239 (247)
++--|| |-|+++++|-+++++
T Consensus 321 ~~~Ghgi~p~tp~env~a~v~av~e 345 (348)
T 4ay7_A 321 LAPGCGIAPMTPLENVKALVAARDE 345 (348)
T ss_dssp EEESSSCCTTCCHHHHHHHHHHHHH
T ss_pred EeCCCccCCCCCHHHHHHHHHHHHH
Confidence 987787 567999999988764
No 100
>4g9p_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; oxidoreductase, isoprenoid biosynthesis, non mevalonate PATH iron-sulphur-cluster; HET: CDI MES; 1.55A {Thermus thermophilus} PDB: 2y0f_A*
Probab=88.41 E-value=1.9 Score=39.23 Aligned_cols=81 Identities=20% Similarity=0.320 Sum_probs=57.6
Q ss_pred HHHHHHHhcCCCCEEEEecCCCHHHHHHHHHHHHh---hCCCCcEEEEEEEcC---------------CCcccCC-----
Q 025860 76 RRRVQVLVESAPDLIAFETIPNKIEAQAYAELLEE---ENIKIPAWFSFNSKD---------------GVNVVSG----- 132 (247)
Q Consensus 76 ~~q~~~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~---~~~~~pv~is~~~~~---------------~~~l~~G----- 132 (247)
..|+..|.++|+|++=+ |+|+.++++++-+..++ .+.++|++.-|.|+. .-++..|
T Consensus 41 v~QI~~L~~aG~eiVRv-aVp~~~~A~al~~I~~~l~~~~~~vPLVADiHF~~~~al~a~~~~a~~~dkiRINPGNig~~ 119 (406)
T 4g9p_A 41 TAQVLELHRAGSEIVRL-TVNDEEAAKAVPEIKRRLLAEGVEVPLVGDFHFNGHLLLRKYPKMAEALDKFRINPGTLGRG 119 (406)
T ss_dssp HHHHHHHHHHTCSEEEE-ECCSHHHHHHHHHHHHHHHHTTCCCCEEEECCSSHHHHHHHCHHHHHHCSEEEECTTSSCST
T ss_pred HHHHHHHHHcCCCEEEE-ecCCHHHHHhHHHHHHHHHhcCCCCceEeeecccHHHHHHHHHHHHhHHhhcccCccccCcc
Confidence 44899999999999986 68999998887664433 345799999998862 1122222
Q ss_pred ----CcHHHHHHHHHhCCCCeEEEEcCCC
Q 025860 133 ----DSLLECASIAESCKRVVSVGINCTP 157 (247)
Q Consensus 133 ----~~~~~~~~~~~~~~~~~avG~NC~~ 157 (247)
+.+.++++.+.+..-+.=||+|..+
T Consensus 120 ~k~~e~~~~vv~~ak~~~~pIRIGVN~GS 148 (406)
T 4g9p_A 120 RHKDEHFAEMIRIAMDLGKPVRIGANWGS 148 (406)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEEEEGGG
T ss_pred ccHHHHHHHHHHHHHHccCCceecccccc
Confidence 2355677777665567889999974
No 101
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=88.32 E-value=13 Score=32.90 Aligned_cols=123 Identities=17% Similarity=0.158 Sum_probs=75.5
Q ss_pred HhcCCCCEEEEecCCCH-----------HHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCc----------HHHHHH
Q 025860 82 LVESAPDLIAFETIPNK-----------IEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDS----------LLECAS 140 (247)
Q Consensus 82 l~~~gvD~i~~ET~~~~-----------~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~----------~~~~~~ 140 (247)
+++.|+|.+-+=-..+. ..+..+.+.+++. ++|+++-+-..+... .+-.+ +..+++
T Consensus 119 a~~~GADAVk~lv~~g~d~~~e~~~~q~~~l~rv~~ec~~~--GiPlllEil~y~~~~-~~~~~~~~a~~~p~~V~~a~R 195 (332)
T 3iv3_A 119 LKEAGADAVKFLLYYDVDGDPQVNVQKQAYIERIGSECQAE--DIPFFLEILTYDETI-SNNSSVEFAKVKVHKVNDAMK 195 (332)
T ss_dssp HHHTTCSEEEEEEEECTTSCHHHHHHHHHHHHHHHHHHHHH--TCCEEEEEEECBTTB-SCTTSHHHHTTHHHHHHHHHH
T ss_pred HHHcCCCEEEEEEEcCCCchHHHHHHHHHHHHHHHHHHHHc--CCceEEEEeccCCCC-CCCcchhhhccCHHHHHHHHH
Confidence 44578998855544432 1223333444555 689988665533221 11111 555666
Q ss_pred HH--HhCCCCeEEEEcCC-Chh---------------HHHHHHHHHHhhcCCCEEEEeCCCCcccccccccccCCCCChH
Q 025860 141 IA--ESCKRVVSVGINCT-PPR---------------FISGLILIIKKVTAKPILIYPNSGEFYDADRKEWVQNTGVSDE 202 (247)
Q Consensus 141 ~~--~~~~~~~avG~NC~-~p~---------------~~~~~l~~l~~~~~~pl~vyPNaG~~~d~~~~~~~~~~~~~~~ 202 (247)
.+ .+ .++|.+=++.+ .++ .....++++......|+++.. +| .+.+
T Consensus 196 ~~~~~e-lGaDv~Kve~p~~~~~v~g~~~~~~~y~~~ea~~~f~~~~~a~~~P~v~ls-gG---------------~~~~ 258 (332)
T 3iv3_A 196 VFSAER-FGIDVLKVEVPVNMVYVEGFAEGEVVYSKEEAAQAFREQEASTDLPYIYLS-AG---------------VSAE 258 (332)
T ss_dssp HHTSGG-GCCSEEEECCSSCGGGBTTTCSSCCCBCHHHHHHHHHHHHHTCSSCEEEEC-TT---------------CCHH
T ss_pred HHhhcC-cCCcEEEEecCCChhhhcccccccccccHHHHHHHHHHHHhcCCCCEEEEC-CC---------------CCHH
Confidence 66 33 58999999997 463 233445666666788865433 22 1356
Q ss_pred HHHHHHHHHHHcCCeEEeecCC
Q 025860 203 DFVSYVSKWCEVGASLVGGCCR 224 (247)
Q Consensus 203 ~~~~~~~~~~~~G~~iIGGCCG 224 (247)
.|.+.++..++.|+++-|=+||
T Consensus 259 ~fl~~v~~A~~aGa~f~Gv~~G 280 (332)
T 3iv3_A 259 LFQETLVFAHKAGAKFNGVLCG 280 (332)
T ss_dssp HHHHHHHHHHHHTCCCCEEEEC
T ss_pred HHHHHHHHHHHcCCCcceEEee
Confidence 7888888888999999999998
No 102
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=87.98 E-value=4.6 Score=37.67 Aligned_cols=65 Identities=12% Similarity=0.035 Sum_probs=42.7
Q ss_pred HHHHHHhcCCCCEEEEecCC-CHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEE
Q 025860 77 RRVQVLVESAPDLIAFETIP-NKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGI 153 (247)
Q Consensus 77 ~q~~~l~~~gvD~i~~ET~~-~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~ 153 (247)
++++.|+++|+|+|.+-+-. +.......++.+++..+++|+++.. ..+.+.+ +.+.+ .|+++|-+
T Consensus 234 ~~a~~l~~aG~d~I~id~a~g~~~~~~~~i~~ir~~~p~~~Vi~g~----------v~t~e~a-~~l~~-aGaD~I~V 299 (496)
T 4fxs_A 234 ERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAAYPHLEIIGGN----------VATAEGA-RALIE-AGVSAVKV 299 (496)
T ss_dssp HHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTCCEEEEE----------ECSHHHH-HHHHH-HTCSEEEE
T ss_pred HHHHHHHhccCceEEeccccccchHHHHHHHHHHHHCCCceEEEcc----------cCcHHHH-HHHHH-hCCCEEEE
Confidence 36788888999999988643 3344555666666654478998832 2234444 44544 48898887
No 103
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=87.94 E-value=5.3 Score=36.88 Aligned_cols=69 Identities=14% Similarity=0.155 Sum_probs=47.3
Q ss_pred HHHHHHHHhcCCCCEEEEecC-CCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEE
Q 025860 75 HRRRVQVLVESAPDLIAFETI-PNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGI 153 (247)
Q Consensus 75 ~~~q~~~l~~~gvD~i~~ET~-~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~ 153 (247)
+.++++.++++|+|.|.+-+. .+.......++.+++..+++|+++. .+.+.+++.. +.+ .|+++|-+
T Consensus 238 ~~~~a~~l~~aGvd~v~i~~~~G~~~~~~e~i~~i~~~~p~~pvi~g----------~~~t~e~a~~-l~~-~G~d~I~v 305 (494)
T 1vrd_A 238 TMERVEKLVKAGVDVIVIDTAHGHSRRVIETLEMIKADYPDLPVVAG----------NVATPEGTEA-LIK-AGADAVKV 305 (494)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHHCTTSCEEEE----------EECSHHHHHH-HHH-TTCSEEEE
T ss_pred HHHHHHHHHHhCCCEEEEEecCCchHHHHHHHHHHHHHCCCceEEeC----------CcCCHHHHHH-HHH-cCCCEEEE
Confidence 345888899999999988543 3455566667777775436898762 2556676644 545 58998887
Q ss_pred cC
Q 025860 154 NC 155 (247)
Q Consensus 154 NC 155 (247)
..
T Consensus 306 ~~ 307 (494)
T 1vrd_A 306 GV 307 (494)
T ss_dssp CS
T ss_pred cC
Confidence 43
No 104
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=87.90 E-value=9.7 Score=33.15 Aligned_cols=140 Identities=17% Similarity=0.080 Sum_probs=77.0
Q ss_pred HHHHHHHHHHHHHhcCCCCEEEEec----------CCCHHHHHHHHHHHHhh--------CCCCcEEEEEEEcCCCcccC
Q 025860 70 TLKDFHRRRVQVLVESAPDLIAFET----------IPNKIEAQAYAELLEEE--------NIKIPAWFSFNSKDGVNVVS 131 (247)
Q Consensus 70 e~~~~~~~q~~~l~~~gvD~i~~ET----------~~~~~E~~aa~~~~~~~--------~~~~pv~is~~~~~~~~l~~ 131 (247)
+..+.|.+.++.+.+ |+|.|-+-- +.+...+..+++.+++. +.+.|+++-++.. + +
T Consensus 150 ~~~~~~~~aa~~~~~-g~d~iein~~sP~~~g~~~~~~~~~~~~il~~vr~~~~~~~~~~g~~~Pv~vKi~~~----~-~ 223 (336)
T 1f76_A 150 QGKDDYLICMEKIYA-YAGYIAINISSPNTPGLRTLQYGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKIAPD----L-S 223 (336)
T ss_dssp GTHHHHHHHHHHHGG-GCSEEEEECCCSSSTTGGGGGSHHHHHHHHHHHHHHHHHHHHHHTSCCCEEEECCSC----C-C
T ss_pred ccHHHHHHHHHHHhc-cCCEEEEEccCCCCCCcccccCHHHHHHHHHHHHHHHHhhhhcccccCceEEEecCC----C-C
Confidence 445566667776665 899986643 11233445566666653 2368999875421 0 1
Q ss_pred CCcHHHHHHHHHhCCCCeEEEEcCCC--------------------h---hHHHHHHHHHHhhc--CCCEEEEeCCCCcc
Q 025860 132 GDSLLECASIAESCKRVVSVGINCTP--------------------P---RFISGLILIIKKVT--AKPILIYPNSGEFY 186 (247)
Q Consensus 132 G~~~~~~~~~~~~~~~~~avG~NC~~--------------------p---~~~~~~l~~l~~~~--~~pl~vyPNaG~~~ 186 (247)
-+.+.+.++.+.+ .|+++|-+-.+. + ......++.+++.. +.||+ .++|.
T Consensus 224 ~~~~~~~a~~l~~-~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~~~~~~ipVi--~~GGI-- 298 (336)
T 1f76_A 224 EEELIQVADSLVR-HNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLELNGRLPII--GVGGI-- 298 (336)
T ss_dssp HHHHHHHHHHHHH-TTCSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHHHHTTSSCEE--EESSC--
T ss_pred HHHHHHHHHHHHH-cCCcEEEEeCCcccccccccccccccCCCcCCchhHHHHHHHHHHHHHHhCCCCCEE--EECCC--
Confidence 1234555666666 589988764321 0 12235566666655 56754 33332
Q ss_pred cccccccccCCCCChHHHHHHHHHHHHcCCeEEeecCC--C-ChHHHHHHHHH
Q 025860 187 DADRKEWVQNTGVSDEDFVSYVSKWCEVGASLVGGCCR--T-TPNTIKGIYRT 236 (247)
Q Consensus 187 d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~iIGGCCG--t-~P~hI~al~~~ 236 (247)
.++++. .+.++.|++.|+=+-+ . +|..++.+++.
T Consensus 299 ------------~~~~da----~~~l~~GAd~V~igr~~l~~~P~~~~~i~~~ 335 (336)
T 1f76_A 299 ------------DSVIAA----REKIAAGASLVQIYSGFIFKGPPLIKEIVTH 335 (336)
T ss_dssp ------------CSHHHH----HHHHHHTCSEEEESHHHHHHCHHHHHHHHHH
T ss_pred ------------CCHHHH----HHHHHCCCCEEEeeHHHHhcCcHHHHHHHhh
Confidence 124333 3345568888875544 2 67777766543
No 105
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=87.83 E-value=2.9 Score=35.89 Aligned_cols=62 Identities=10% Similarity=0.143 Sum_probs=43.9
Q ss_pred HHHHHhcCCCCEEEE--ecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEEcC
Q 025860 78 RVQVLVESAPDLIAF--ETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGINC 155 (247)
Q Consensus 78 q~~~l~~~gvD~i~~--ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~NC 155 (247)
|++.....|+|.+++ -+++ ..+++..++.+++. ++.+|+++ .+.+++...+ + .+++.||+|=
T Consensus 127 qv~~A~~~GAD~VlLi~a~l~-~~~l~~l~~~a~~l--Gl~~lvev-----------~t~ee~~~A~-~-~Gad~IGv~~ 190 (272)
T 3qja_A 127 QIHEARAHGADMLLLIVAALE-QSVLVSMLDRTESL--GMTALVEV-----------HTEQEADRAL-K-AGAKVIGVNA 190 (272)
T ss_dssp HHHHHHHTTCSEEEEEGGGSC-HHHHHHHHHHHHHT--TCEEEEEE-----------SSHHHHHHHH-H-HTCSEEEEES
T ss_pred HHHHHHHcCCCEEEEecccCC-HHHHHHHHHHHHHC--CCcEEEEc-----------CCHHHHHHHH-H-CCCCEEEECC
Confidence 455556689999988 4554 67788888888887 57888766 2455654444 3 3799999995
No 106
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=87.59 E-value=3.2 Score=37.77 Aligned_cols=66 Identities=11% Similarity=0.106 Sum_probs=44.3
Q ss_pred HHHHHHHhcCCCCEEEEecC-CCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEEc
Q 025860 76 RRRVQVLVESAPDLIAFETI-PNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGIN 154 (247)
Q Consensus 76 ~~q~~~l~~~gvD~i~~ET~-~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~N 154 (247)
.++++.++++|||+|++.|- .+.......++.+++.. +.|+++.-. .+.+++.. +.+ .++|+|.+.
T Consensus 146 ~e~~~~lveaGvdvIvldta~G~~~~~~e~I~~ik~~~-~i~Vi~g~V----------~t~e~A~~-a~~-aGAD~I~vG 212 (400)
T 3ffs_A 146 IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSKM-NIDVIVGNV----------VTEEATKE-LIE-NGADGIKVG 212 (400)
T ss_dssp CHHHHHHHHHTCSEEEECCSCCSBHHHHHHHHHHHTTC-CCEEEEEEE----------CSHHHHHH-HHH-TTCSEEEEC
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCcccHHHHHHHHHhcC-CCeEEEeec----------CCHHHHHH-HHH-cCCCEEEEe
Confidence 45889999999999998754 34455556666677653 688886311 24455544 545 589998884
No 107
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=87.56 E-value=1.6 Score=36.31 Aligned_cols=100 Identities=16% Similarity=0.205 Sum_probs=57.0
Q ss_pred HHHHHHhcCCCCEEEEec--CCCHHHHHHHHHHHHhhCCCCcEEEEEEEc--CC---Cccc-----CCCcHHHHHHHHHh
Q 025860 77 RRVQVLVESAPDLIAFET--IPNKIEAQAYAELLEEENIKIPAWFSFNSK--DG---VNVV-----SGDSLLECASIAES 144 (247)
Q Consensus 77 ~q~~~l~~~gvD~i~~ET--~~~~~E~~aa~~~~~~~~~~~pv~is~~~~--~~---~~l~-----~G~~~~~~~~~~~~ 144 (247)
++++.+.+.|+|.+.+=+ +.+...+.. +.+..+ ...+.+++++. ++ -.+. ++.+..+.++.+.+
T Consensus 87 ~~~~~~~~~Gad~V~lg~~~l~~p~~~~~---~~~~~g-~~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~ 162 (253)
T 1thf_D 87 ETASELILRGADKVSINTAAVENPSLITQ---IAQTFG-SQAVVVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVVEVEK 162 (253)
T ss_dssp HHHHHHHHTTCSEEEESHHHHHCTHHHHH---HHHHHC-GGGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEChHHHhChHHHHH---HHHHcC-CCcEEEEEEEEccCCcEEEEECCCccccCCCHHHHHHHHHH
Confidence 356666778999998754 344433333 334443 12455566653 11 0111 22356777777766
Q ss_pred CCCCeEEEEcCCChhH-----HHHHHHHHHhhcCCCEEEEeCCC
Q 025860 145 CKRVVSVGINCTPPRF-----ISGLILIIKKVTAKPILIYPNSG 183 (247)
Q Consensus 145 ~~~~~avG~NC~~p~~-----~~~~l~~l~~~~~~pl~vyPNaG 183 (247)
.+++.|.++...+.. -..+++++++..+.|+++ ++|
T Consensus 163 -~G~~~i~~~~~~~~g~~~g~~~~~~~~l~~~~~ipvia--~GG 203 (253)
T 1thf_D 163 -RGAGEILLTSIDRDGTKSGYDTEMIRFVRPLTTLPIIA--SGG 203 (253)
T ss_dssp -TTCSEEEEEETTTTTSCSCCCHHHHHHHGGGCCSCEEE--ESC
T ss_pred -CCCCEEEEEeccCCCCCCCCCHHHHHHHHHhcCCCEEE--ECC
Confidence 588888887643221 256777777777788544 454
No 108
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=87.41 E-value=14 Score=38.21 Aligned_cols=99 Identities=16% Similarity=0.096 Sum_probs=66.7
Q ss_pred HHHHhcCCCCEE-EEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCccc----CCCc---HHHHHHHHHhCCCCeE
Q 025860 79 VQVLVESAPDLI-AFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVV----SGDS---LLECASIAESCKRVVS 150 (247)
Q Consensus 79 ~~~l~~~gvD~i-~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~----~G~~---~~~~~~~~~~~~~~~a 150 (247)
++...++|+|.| +|-..++++..+.+.+.+++.+ .-+...++.. ++.+. +-.+ +.+.++.+.+ .|++.
T Consensus 633 v~~a~~~Gvd~irif~~~sd~~~~~~~~~~~~e~g--~~~~~~i~~~-~~~~~pe~~~~~~~~~~~~~a~~~~~-~Ga~~ 708 (1150)
T 3hbl_A 633 VQESAKAGIDVFRIFDSLNWVDQMKVANEAVQEAG--KISEGTICYT-GDILNPERSNIYTLEYYVKLAKELER-EGFHI 708 (1150)
T ss_dssp HHHHHHTTCCEEEEECTTCCGGGGHHHHHHHHHTT--CEEEEEEECC-SCTTCTTTCSSSSHHHHHHHHHHHHH-TTCSE
T ss_pred HHHHHhCCcCEEEEEeeCCHHHHHHHHHHHHHHHh--hheeEEEeec-ccccChhhcCCCCHHHHHHHHHHHHH-cCCCe
Confidence 444556899999 7788888888888888888874 2222222222 11111 1123 4455666666 58998
Q ss_pred EEEcCC----ChhHHHHHHHHHHhhcCCCEEEEeC
Q 025860 151 VGINCT----PPRFISGLILIIKKVTAKPILIYPN 181 (247)
Q Consensus 151 vG~NC~----~p~~~~~~l~~l~~~~~~pl~vyPN 181 (247)
|.+-=+ .|..+..+++.+++..+.||.+...
T Consensus 709 i~l~Dt~G~~~P~~~~~lv~~l~~~~~~~i~~H~H 743 (1150)
T 3hbl_A 709 LAIKDMAGLLKPKAAYELIGELKSAVDLPIHLHTH 743 (1150)
T ss_dssp EEEEETTCCCCHHHHHHHHHHHHHHCCSCEEEEEC
T ss_pred eeEcCccCCCCHHHHHHHHHHHHHhcCCeEEEEeC
Confidence 888654 4999999999999888888876653
No 109
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=87.21 E-value=12 Score=33.80 Aligned_cols=74 Identities=8% Similarity=-0.028 Sum_probs=46.7
Q ss_pred HHHHHHHHHhCCCCeEEEEcCCC---------h-----------------hHHHHHHHHHHhhcC-CCEEEEeCCCCccc
Q 025860 135 LLECASIAESCKRVVSVGINCTP---------P-----------------RFISGLILIIKKVTA-KPILIYPNSGEFYD 187 (247)
Q Consensus 135 ~~~~~~~~~~~~~~~avG~NC~~---------p-----------------~~~~~~l~~l~~~~~-~pl~vyPNaG~~~d 187 (247)
+.++++.+.+ .|.|+|=|||.+ | ..+.++++.+++... .||++.-+.+..++
T Consensus 173 f~~AA~~a~~-AGfDgVEIh~ahGYLl~QFLsp~~N~RtD~yGGslenR~rf~~Eiv~aVr~avg~~~V~vRls~~~~~~ 251 (402)
T 2hsa_B 173 YRRSALNAIE-AGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSLANRCKFITQVVQAVVSAIGADRVGVRVSPAIDHL 251 (402)
T ss_dssp HHHHHHHHHH-TTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECSSCCST
T ss_pred HHHHHHHHHH-cCCCEEEECCccchHHHhccCCccCccCCccCcChhhhhHHHHHHHHHHHHHhCCCcEEEEeccccccC
Confidence 3455555555 589999999963 2 235666777777653 49999988764222
Q ss_pred ccccccccCCCCChHHHHHHHHHHHHcC
Q 025860 188 ADRKEWVQNTGVSDEDFVSYVSKWCEVG 215 (247)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G 215 (247)
+... ..+.+++.+.++.+.+.|
T Consensus 252 g~~~------~~~~~~~~~la~~le~~G 273 (402)
T 2hsa_B 252 DAMD------SNPLSLGLAVVERLNKIQ 273 (402)
T ss_dssp TCCC------SCHHHHHHHHHHHHHHHH
T ss_pred CCCC------CCCHHHHHHHHHHHHhcC
Confidence 1100 123466777888777778
No 110
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=86.92 E-value=0.63 Score=40.93 Aligned_cols=83 Identities=12% Similarity=0.060 Sum_probs=53.1
Q ss_pred HHHHHHhcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEEcCC
Q 025860 77 RRVQVLVESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGINCT 156 (247)
Q Consensus 77 ~q~~~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~NC~ 156 (247)
+|+++..++|+|.|++|-+.+.+|++.+.+.++ ++|+++.+... +.+ ...++.+.. + .|+..|-.-.+
T Consensus 174 ~Ra~ay~eAGAD~ifi~g~~~~~ei~~~~~~~~----~~Pl~~n~~~~--g~~-p~~~~~eL~----~-lGv~~v~~~~~ 241 (302)
T 3fa4_A 174 ARLRAARDAGADVGFLEGITSREMARQVIQDLA----GWPLLLNMVEH--GAT-PSISAAEAK----E-MGFRIIIFPFA 241 (302)
T ss_dssp HHHHHHHTTTCSEEEETTCCCHHHHHHHHHHTT----TSCEEEECCTT--SSS-CCCCHHHHH----H-HTCSEEEETTT
T ss_pred HHHHHHHHcCCCEEeecCCCCHHHHHHHHHHhc----CCceeEEEecC--CCC-CCCCHHHHH----H-cCCCEEEEchH
Confidence 488899999999999999999999998777664 47887766421 221 122444433 3 35554444444
Q ss_pred C----hhHHHHHHHHHHhh
Q 025860 157 P----PRFISGLILIIKKV 171 (247)
Q Consensus 157 ~----p~~~~~~l~~l~~~ 171 (247)
. ...+...++.|++.
T Consensus 242 ~~raa~~A~~~~~~~i~~~ 260 (302)
T 3fa4_A 242 ALGPAVAAMREAMEKLKRD 260 (302)
T ss_dssp THHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHc
Confidence 3 24456666666554
No 111
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=86.92 E-value=6.4 Score=36.60 Aligned_cols=67 Identities=10% Similarity=0.040 Sum_probs=44.6
Q ss_pred HHHHHHHHhcCCCCEEEEecC-CCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEE
Q 025860 75 HRRRVQVLVESAPDLIAFETI-PNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGI 153 (247)
Q Consensus 75 ~~~q~~~l~~~gvD~i~~ET~-~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~ 153 (247)
+.++++.|+++|+|+|.+-+- ++.......++.+++..+++|+++.. ..+.+++. .+.+ .|+++|.+
T Consensus 230 ~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~v~~i~~~~p~~~Vi~g~----------v~t~e~a~-~l~~-aGaD~I~v 297 (490)
T 4avf_A 230 TGERVAALVAAGVDVVVVDTAHGHSKGVIERVRWVKQTFPDVQVIGGN----------IATAEAAK-ALAE-AGADAVKV 297 (490)
T ss_dssp HHHHHHHHHHTTCSEEEEECSCCSBHHHHHHHHHHHHHCTTSEEEEEE----------ECSHHHHH-HHHH-TTCSEEEE
T ss_pred hHHHHHHHhhcccceEEecccCCcchhHHHHHHHHHHHCCCceEEEee----------eCcHHHHH-HHHH-cCCCEEEE
Confidence 345788899999999998743 34445555666666654468988742 23445444 4555 58999988
No 112
>1b73_A Glutamate racemase; isomerase; 2.30A {Aquifex pyrophilus} SCOP: c.78.2.1 c.78.2.1 PDB: 1b74_A*
Probab=86.83 E-value=6.1 Score=33.16 Aligned_cols=150 Identities=15% Similarity=0.147 Sum_probs=77.3
Q ss_pred CCHHHHHHHHHHHHHHHhcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhC
Q 025860 66 ITVETLKDFHRRRVQVLVESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESC 145 (247)
Q Consensus 66 ~s~~e~~~~~~~q~~~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~ 145 (247)
.+.+++.+...+.++.|.+.|+|+|++=+.+.- ..+++.+++.. ++||+ |. ++.+++.+...
T Consensus 42 ~s~~~i~~~~~~~~~~L~~~g~d~iviaCnTa~---~~~~~~lr~~~-~iPvi-------------gi-~e~~~~~A~~~ 103 (254)
T 1b73_A 42 RSKDTIIRYSLECAGFLKDKGVDIIVVACNTAS---AYALERLKKEI-NVPVF-------------GV-IEPGVKEALKK 103 (254)
T ss_dssp SCHHHHHHHHHHHHHHHHTTTCSEEEECCHHHH---TTSHHHHHHHS-SSCEE-------------ES-HHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEEeCchhh---HHHHHHHHHhC-CCCEE-------------ee-eHHHHHHHHHc
Confidence 478999999999999999999999998754421 01345556553 68877 21 23334333221
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhhcCCCEEEEeCCCCcccccccccccCCCCChHHHHHHHHHHHHc-CCeEEeecCC
Q 025860 146 KRVVSVGINCTPPRFISGLILIIKKVTAKPILIYPNSGEFYDADRKEWVQNTGVSDEDFVSYVSKWCEV-GASLVGGCCR 224 (247)
Q Consensus 146 ~~~~avG~NC~~p~~~~~~l~~l~~~~~~pl~vyPNaG~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-G~~iIGGCCG 224 (247)
.+..-||+=.+.........+..-+..+..+...|..+....-..+ +... ....+.+.++++++.+. .+-|+ ||-.
T Consensus 104 ~~~~rigVlaT~~T~~~~~y~~~l~~~g~~v~~~~~~~~v~~ie~g-~~~~-~~~~~~l~~~~~~l~~~~d~IIL-GCT~ 180 (254)
T 1b73_A 104 SRNKKIGVIGTPATVKSGAYQRKLEEGGADVFAKACPLFAPLAEEG-LLEG-EITRKVVEHYLKEFKGKIDTLIL-GCTH 180 (254)
T ss_dssp CSSCEEEEEECHHHHHHCHHHHHHHTTSCEEEEEECCCCTTTSCGG-GGSG-GGHHHHHHHHSTTTTTTCSEEEE-CCCC
T ss_pred cCCCEEEEEEChHHhhhHHHHHHHHcCCCEEEecCCHHHHHHHHCC-CCCC-HHHHHHHHHHHHHHHhcCCEEEE-CccC
Confidence 2345677777643332233332222334455555655433222111 1110 01233455665555443 33333 4655
Q ss_pred CChHHHHHHHHHh
Q 025860 225 TTPNTIKGIYRTL 237 (247)
Q Consensus 225 t~P~hI~al~~~l 237 (247)
-.. -.+.+.+.+
T Consensus 181 ~p~-l~~~i~~~~ 192 (254)
T 1b73_A 181 YPL-LKKEIKKFL 192 (254)
T ss_dssp TTC-CHHHHHHHS
T ss_pred hHH-HHHHHHHHc
Confidence 433 455555544
No 113
>2dwu_A Glutamate racemase; isomerase; HET: DGL; 1.60A {Bacillus anthracis}
Probab=86.58 E-value=5.5 Score=34.01 Aligned_cols=159 Identities=14% Similarity=0.073 Sum_probs=84.4
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHH
Q 025860 61 NYGDAITVETLKDFHRRRVQVLVESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECAS 140 (247)
Q Consensus 61 ~y~~~~s~~e~~~~~~~q~~~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~ 140 (247)
+|+. .+.+++.++..+.++.|.+.|+|+|++=..+.- ..+++.+++.. ++||+ |. ++.+++
T Consensus 45 PyG~-~s~~~i~~~~~~~~~~L~~~g~d~IViACNTas---~~~l~~lr~~~-~iPVi-------------gi-iep~~~ 105 (276)
T 2dwu_A 45 PYGP-RSVEEVQSFVFEMVEFLKQFPLKALVVACNTAA---AATLAALQEAL-SIPVI-------------GV-IHPGAR 105 (276)
T ss_dssp CCTT-SCHHHHHHHHHHHHHHHTTSCEEEEEECCHHHH---HHHHHHHHHHC-SSCEE-------------ES-HHHHHH
T ss_pred CCCC-CCHHHHHHHHHHHHHHHHHCCCCEEEEeCCcHH---HHHHHHHHHHC-CCCEE-------------ec-cHHHHH
Confidence 3443 578999999999999999999999998764421 12466677654 68877 21 233443
Q ss_pred HHHhCCCCeEEEEcCCChh----HHHHHHHHHHhhcCCCEEEEeCCCCcccccccccccCCCCChHHHHHHHHHHHHcCC
Q 025860 141 IAESCKRVVSVGINCTPPR----FISGLILIIKKVTAKPILIYPNSGEFYDADRKEWVQNTGVSDEDFVSYVSKWCEVGA 216 (247)
Q Consensus 141 ~~~~~~~~~avG~NC~~p~----~~~~~l~~l~~~~~~pl~vyPNaG~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 216 (247)
.+....+-.-|||=.+... ...++++... .+..+.-.|..+.+..-. ..+... ....+.+.++++++.+.|+
T Consensus 106 ~A~~~~~~~rIgVlaT~~T~~s~~y~~~i~~~~--~~~~v~~~~~~~~v~~ve-~g~~~~-~~~~~~l~~~l~~l~~~~~ 181 (276)
T 2dwu_A 106 AAIKVTKKGKIGVIGTVGTIQSNMYEKALHELD--TYLKVHSHACPTLATVVE-NRLEDT-AYVTQQVKQALLPLTKEDI 181 (276)
T ss_dssp HHHHHCSSSEEEEEECHHHHHTTHHHHHHHHHC--TTCEEEEEECTTHHHHHH-HSTTCH-HHHHHHHHHHHHHHHTSCC
T ss_pred HHHHhcCCCeEEEEeChhhhhhHHHHHHHHHhC--CCCEEEeeeCHHHHHHHH-cCCcCC-HHHHHHHHHHHHHHHhcCC
Confidence 3322123346777666432 2344444331 233343445443221111 111100 0112346677777777776
Q ss_pred eEEeecCCCChHHHHHHHHHhhCCCC
Q 025860 217 SLVGGCCRTTPNTIKGIYRTLSNRSS 242 (247)
Q Consensus 217 ~iIGGCCGt~P~hI~al~~~l~~~~~ 242 (247)
..|==-|.--|-....|++.+....|
T Consensus 182 D~IVLGCTh~p~l~~~i~~~~~~~v~ 207 (276)
T 2dwu_A 182 DTLILGCTHYPLLESYIKKELGEDVT 207 (276)
T ss_dssp SEEEECSTTGGGGHHHHHHHHCTTSE
T ss_pred CEEEECCCCHHHHHHHHHHHcCCCCe
Confidence 55433344445466666666543333
No 114
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=86.56 E-value=9.8 Score=32.27 Aligned_cols=135 Identities=21% Similarity=0.195 Sum_probs=74.3
Q ss_pred HHHHhcCCCCEEEE-ecCCCH------HHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccC-C--CcHHHHHHHHHhCCCC
Q 025860 79 VQVLVESAPDLIAF-ETIPNK------IEAQAYAELLEEENIKIPAWFSFNSKDGVNVVS-G--DSLLECASIAESCKRV 148 (247)
Q Consensus 79 ~~~l~~~gvD~i~~-ET~~~~------~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~-G--~~~~~~~~~~~~~~~~ 148 (247)
++..++.|+|.+-+ +-+.+. +|++.+.+..++. ++|+++. +..++..+.+ + +.+..+++...+ .++
T Consensus 98 ve~Ai~~Ga~~v~~~~nig~~~~~~~~~~~~~v~~~~~~~--~~~vIi~-~~~~G~~~~~~~s~~~i~~a~~~a~~-~GA 173 (263)
T 1w8s_A 98 VEEAVSLGASAVGYTIYPGSGFEWKMFEELARIKRDAVKF--DLPLVVE-SFPRGGKVVNETAPEIVAYAARIALE-LGA 173 (263)
T ss_dssp HHHHHHTTCSEEEEEECTTSTTHHHHHHHHHHHHHHHHHH--TCCEEEE-ECCCSTTCCCTTCHHHHHHHHHHHHH-HTC
T ss_pred HHHHHHCCCCEEEEEEecCCcCHHHHHHHHHHHHHHHHHc--CCeEEEE-eeCCCCccccCCCHHHHHHHHHHHHH-cCC
Confidence 34455689988844 433332 3444455555555 5888765 2222222211 1 223333444444 589
Q ss_pred eEEEEcCC-ChhHHHHHHHHHHhhcCC-CEEEEeCCCCcccccccccccCCCCChHHHHHHHHHHHHcCCeEEeecCCC-
Q 025860 149 VSVGINCT-PPRFISGLILIIKKVTAK-PILIYPNSGEFYDADRKEWVQNTGVSDEDFVSYVSKWCEVGASLVGGCCRT- 225 (247)
Q Consensus 149 ~avG~NC~-~p~~~~~~l~~l~~~~~~-pl~vyPNaG~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~iIGGCCGt- 225 (247)
|.|++.-+ +++. ++.+.+..+. |+.+- +|.. . .+.+++.+.+...++.|++ |=++|.
T Consensus 174 D~vkt~~~~~~e~----~~~~~~~~~~~pV~as--GGi~---------~---~~~~~~l~~i~~~~~aGA~--Gvsvgra 233 (263)
T 1w8s_A 174 DAMKIKYTGDPKT----FSWAVKVAGKVPVLMS--GGPK---------T---KTEEDFLKQVEGVLEAGAL--GIAVGRN 233 (263)
T ss_dssp SEEEEECCSSHHH----HHHHHHHTTTSCEEEE--CCSC---------C---SSHHHHHHHHHHHHHTTCC--EEEESHH
T ss_pred CEEEEcCCCCHHH----HHHHHHhCCCCeEEEE--eCCC---------C---CCHHHHHHHHHHHHHcCCe--EEEEehh
Confidence 99999964 4444 4444444455 85443 3421 0 1367888888888899998 767773
Q ss_pred --ChHHHHHHHHHh
Q 025860 226 --TPNTIKGIYRTL 237 (247)
Q Consensus 226 --~P~hI~al~~~l 237 (247)
..++++++.+.+
T Consensus 234 I~~~~dp~~~~~~l 247 (263)
T 1w8s_A 234 VWQRRDALKFARAL 247 (263)
T ss_dssp HHTSTTHHHHHHHH
T ss_pred hcCCcCHHHHHHHH
Confidence 334555554444
No 115
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=86.51 E-value=0.71 Score=40.00 Aligned_cols=39 Identities=23% Similarity=0.236 Sum_probs=31.8
Q ss_pred HHHHHHHHhcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEE
Q 025860 75 HRRRVQVLVESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAW 118 (247)
Q Consensus 75 ~~~q~~~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~ 118 (247)
-.++++++.++|+|.|++|.+++.+|++.+.+.++ .|+-
T Consensus 170 ai~Ra~ay~eAGAd~i~~e~~~~~~~~~~i~~~~~-----~P~n 208 (275)
T 2ze3_A 170 TVRRGQAYADAGADGIFVPLALQSQDIRALADALR-----VPLN 208 (275)
T ss_dssp HHHHHHHHHHTTCSEEECTTCCCHHHHHHHHHHCS-----SCEE
T ss_pred HHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHhcC-----CCEE
Confidence 44488999999999999999999999988776543 6763
No 116
>1f8m_A Isocitrate lyase, ICL; alpha-beta barrel, helix-swapping, closed conformation, bromopyuvate modification, structural genomics; 1.80A {Mycobacterium tuberculosis H37RV} SCOP: c.1.12.7 PDB: 1f61_A 1f8i_A
Probab=86.46 E-value=2.8 Score=38.53 Aligned_cols=32 Identities=28% Similarity=0.423 Sum_probs=29.1
Q ss_pred HHHHHhcCCCCEEEEec-CCCHHHHHHHHHHHHh
Q 025860 78 RVQVLVESAPDLIAFET-IPNKIEAQAYAELLEE 110 (247)
Q Consensus 78 q~~~l~~~gvD~i~~ET-~~~~~E~~aa~~~~~~ 110 (247)
++.++.+ |+|+|++|| .++++|++.+.+.++.
T Consensus 272 Ra~AYa~-gAD~if~e~~~~~~eei~~f~~~v~~ 304 (429)
T 1f8m_A 272 RAKAYAP-FADLIWMETGTPDLEAARQFSEAVKA 304 (429)
T ss_dssp HHHHHGG-GCSEEEECCSSCCHHHHHHHHHHHHT
T ss_pred HHHHHHh-cCCEEEeCCCCCCHHHHHHHHHHhcc
Confidence 7788887 999999998 8999999999999885
No 117
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=86.18 E-value=15 Score=31.27 Aligned_cols=134 Identities=16% Similarity=0.151 Sum_probs=76.4
Q ss_pred HHHHHHHHhc-CCCCEEEEecC------------CCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHH
Q 025860 75 HRRRVQVLVE-SAPDLIAFETI------------PNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASI 141 (247)
Q Consensus 75 ~~~q~~~l~~-~gvD~i~~ET~------------~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~ 141 (247)
|.+.++.+.+ +|+|.|-+--. .+...+..+++.+++.- +.|+++-+.. +-+++.+.++.
T Consensus 113 ~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g~~~~~~~eii~~v~~~~-~~pv~vk~~~-------~~~~~~~~a~~ 184 (311)
T 1ep3_A 113 YVAVCAKIGDAANVKAIELNISCPNVKHGGQAFGTDPEVAAALVKACKAVS-KVPLYVKLSP-------NVTDIVPIAKA 184 (311)
T ss_dssp HHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGGGCHHHHHHHHHHHHHHC-SSCEEEEECS-------CSSCSHHHHHH
T ss_pred HHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhcCCHHHHHHHHHHHHHhc-CCCEEEEECC-------ChHHHHHHHHH
Confidence 5556666776 89998866321 24455567777777653 5898877652 11345677777
Q ss_pred HHhCCCCeEEEEcC----------C-------------Chh---HHHHHHHHHHhhcCCCEEEEeCCCCccccccccccc
Q 025860 142 AESCKRVVSVGINC----------T-------------PPR---FISGLILIIKKVTAKPILIYPNSGEFYDADRKEWVQ 195 (247)
Q Consensus 142 ~~~~~~~~avG~NC----------~-------------~p~---~~~~~l~~l~~~~~~pl~vyPNaG~~~d~~~~~~~~ 195 (247)
+.+ .++++|-+-. + ++. ....+++.+++..+.|++ .++|..
T Consensus 185 l~~-~G~d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~~~~~~~~~~i~~i~~~~~ipvi--a~GGI~---------- 251 (311)
T 1ep3_A 185 VEA-AGADGLTMINTLMGVRFDLKTRQPILANITGGLSGPAIKPVALKLIHQVAQDVDIPII--GMGGVA---------- 251 (311)
T ss_dssp HHH-TTCSEEEECCCEEECCBCTTTCSBSSTTSCEEEESGGGHHHHHHHHHHHHTTCSSCEE--ECSSCC----------
T ss_pred HHH-cCCCEEEEeCCCcccccCcccCCccccCCCCcccCccchHHHHHHHHHHHHhcCCCEE--EECCcC----------
Confidence 766 5888887721 1 111 124677777777777854 455531
Q ss_pred CCCCChHHHHHHHHHHHHcCCeEEeecCC--CChHHHHHHHHHh
Q 025860 196 NTGVSDEDFVSYVSKWCEVGASLVGGCCR--TTPNTIKGIYRTL 237 (247)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~G~~iIGGCCG--t~P~hI~al~~~l 237 (247)
++++. .++++.|+..|+=+-. .+|+.++.+.+.+
T Consensus 252 ----~~~d~----~~~l~~GAd~V~vg~~~l~~p~~~~~i~~~l 287 (311)
T 1ep3_A 252 ----NAQDV----LEMYMAGASAVAVGTANFADPFVCPKIIDKL 287 (311)
T ss_dssp ----SHHHH----HHHHHHTCSEEEECTHHHHCTTHHHHHHHHH
T ss_pred ----CHHHH----HHHHHcCCCEEEECHHHHcCcHHHHHHHHHH
Confidence 23322 3344556666642222 2566665555443
No 118
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=86.02 E-value=6.3 Score=32.61 Aligned_cols=149 Identities=13% Similarity=0.068 Sum_probs=80.3
Q ss_pred CHHHHHHHHHHHHHHHhcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCC
Q 025860 67 TVETLKDFHRRRVQVLVESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCK 146 (247)
Q Consensus 67 s~~e~~~~~~~q~~~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~ 146 (247)
+.++++. .++...+.|++.+. +.|.. ++.+.+.++ +.++. ++.-.+-+....+..+.++-+ ..+ .
T Consensus 18 t~~~i~~----l~~~a~~~g~~~v~--v~~~~--v~~~~~~l~----~v~v~-~v~~~P~g~~~~~~k~~~~~~-A~~-~ 82 (225)
T 1mzh_A 18 SEKEIEE----FVLKSEELGIYAVC--VNPYH--VKLASSIAK----KVKVC-CVIGFPLGLNKTSVKVKEAVE-AVR-D 82 (225)
T ss_dssp CHHHHHH----HHHHHHHTTCSEEE--ECGGG--HHHHHHHCS----SSEEE-EEESTTTCCSCHHHHHHHHHH-HHH-T
T ss_pred CHHHHHH----HHHHHHHhCCeEEE--ECHHH--HHHHHHHhc----CCcee-eEecCCCCccchhhhHHHHHH-HHH-c
Confidence 5566555 45545568999987 33433 222223222 23332 232111111112222233323 333 4
Q ss_pred CCeEEE--EcCC-----ChhHHHHHHHHHHhhcCCCEEEEeCCCCcccccccccccCCCCChHHHHHHHHHHHHcCCeEE
Q 025860 147 RVVSVG--INCT-----PPRFISGLILIIKKVTAKPILIYPNSGEFYDADRKEWVQNTGVSDEDFVSYVSKWCEVGASLV 219 (247)
Q Consensus 147 ~~~avG--~NC~-----~p~~~~~~l~~l~~~~~~pl~vyPNaG~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~iI 219 (247)
+++.|- +|.+ .++.+...++.+++..+ |+.+.- .++. .. .++++..+.++...+.|+.+|
T Consensus 83 Gad~Id~viN~g~~~~~~~~~~~~~i~~v~~a~~-pv~vKv----i~e~--~~------l~~~~~~~~a~~a~eaGad~I 149 (225)
T 1mzh_A 83 GAQELDIVWNLSAFKSEKYDFVVEELKEIFRETP-SAVHKV----IVET--PY------LNEEEIKKAVEICIEAGADFI 149 (225)
T ss_dssp TCSEEEEECCHHHHHTTCHHHHHHHHHHHHHTCT-TSEEEE----ECCG--GG------CCHHHHHHHHHHHHHHTCSEE
T ss_pred CCCEEEEEecHHHHhcCChHHHHHHHHHHHHHhc-CceEEE----EEeC--CC------CCHHHHHHHHHHHHHhCCCEE
Confidence 788887 6764 35566666777777665 654433 0000 11 245677888888889999998
Q ss_pred eec-----CCCChHHHHHHHHHhhCCCCC
Q 025860 220 GGC-----CRTTPNTIKGIYRTLSNRSSV 243 (247)
Q Consensus 220 GGC-----CGt~P~hI~al~~~l~~~~~~ 243 (247)
=-. .|.+++.++.+++.+....|+
T Consensus 150 ~tstg~~~gga~~~~i~~v~~~v~~~ipV 178 (225)
T 1mzh_A 150 KTSTGFAPRGTTLEEVRLIKSSAKGRIKV 178 (225)
T ss_dssp ECCCSCSSSCCCHHHHHHHHHHHTTSSEE
T ss_pred EECCCCCCCCCCHHHHHHHHHHhCCCCcE
Confidence 322 234779999999887544443
No 119
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=86.01 E-value=12 Score=29.97 Aligned_cols=89 Identities=16% Similarity=0.074 Sum_probs=55.1
Q ss_pred HHHHHhcCCCCEEEEecCCC-HHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEEcCC
Q 025860 78 RVQVLVESAPDLIAFETIPN-KIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGINCT 156 (247)
Q Consensus 78 q~~~l~~~gvD~i~~ET~~~-~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~NC~ 156 (247)
.++.+. .|+|+|-+=+ |. +......++.+|+..+++|+.+.+-+.+ |. ...++.+.+ .|++.|-+-+.
T Consensus 18 ~~~~~~-~~~diie~G~-p~~~~~g~~~i~~ir~~~~~~~i~~~~~~~~------~~--~~~~~~~~~-~Gad~v~v~~~ 86 (211)
T 3f4w_A 18 FMDKVV-DDVDIIEVGT-PFLIREGVNAIKAIKEKYPHKEVLADAKIMD------GG--HFESQLLFD-AGADYVTVLGV 86 (211)
T ss_dssp HHHHHG-GGCSEEEECH-HHHHHHTTHHHHHHHHHCTTSEEEEEEEECS------CH--HHHHHHHHH-TTCSEEEEETT
T ss_pred HHHHhh-cCccEEEeCc-HHHHhccHHHHHHHHHhCCCCEEEEEEEecc------ch--HHHHHHHHh-cCCCEEEEeCC
Confidence 555564 5899874433 54 5555667777777634789987766543 21 233555555 58898888776
Q ss_pred C-hhHHHHHHHHHHhhcCCCEEE
Q 025860 157 P-PRFISGLILIIKKVTAKPILI 178 (247)
Q Consensus 157 ~-p~~~~~~l~~l~~~~~~pl~v 178 (247)
. .+.+..+++.+++. +.++++
T Consensus 87 ~~~~~~~~~~~~~~~~-g~~~~v 108 (211)
T 3f4w_A 87 TDVLTIQSCIRAAKEA-GKQVVV 108 (211)
T ss_dssp SCHHHHHHHHHHHHHH-TCEEEE
T ss_pred CChhHHHHHHHHHHHc-CCeEEE
Confidence 4 35667777777665 444443
No 120
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=85.64 E-value=1.4 Score=36.18 Aligned_cols=101 Identities=17% Similarity=0.121 Sum_probs=54.6
Q ss_pred HHHHHhcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCC-----CcccCC-----CcHHHHHHHHHhCCC
Q 025860 78 RVQVLVESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDG-----VNVVSG-----DSLLECASIAESCKR 147 (247)
Q Consensus 78 q~~~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~-----~~l~~G-----~~~~~~~~~~~~~~~ 147 (247)
+++.+.+.|+|.+.+-+-. +.+...+.++.+..+ ...+.+++++... -.+..| .+..+.++.+.+ .+
T Consensus 91 ~~~~~~~~Gad~V~i~~~~-~~~~~~~~~~~~~~g-~~~i~~~~~~~~~~g~~~v~~~~~~~~~~~~~~e~~~~~~~-~G 167 (253)
T 1h5y_A 91 DATTLFRAGADKVSVNTAA-VRNPQLVALLAREFG-SQSTVVAIDAKWNGEYYEVYVKGGREATGLDAVKWAKEVEE-LG 167 (253)
T ss_dssp HHHHHHHHTCSEEEESHHH-HHCTHHHHHHHHHHC-GGGEEEEEEEEECSSSEEEEETTTTEEEEEEHHHHHHHHHH-HT
T ss_pred HHHHHHHcCCCEEEEChHH-hhCcHHHHHHHHHcC-CCcEEEEEEeecCCCcEEEEEeCCeecCCCCHHHHHHHHHh-CC
Confidence 4555666799999976521 222222334444443 1235556555421 111122 356666776766 47
Q ss_pred CeEEEEcCCChhH-----HHHHHHHHHhhcCCCEEEEeCCC
Q 025860 148 VVSVGINCTPPRF-----ISGLILIIKKVTAKPILIYPNSG 183 (247)
Q Consensus 148 ~~avG~NC~~p~~-----~~~~l~~l~~~~~~pl~vyPNaG 183 (247)
++.|.++...+.. -...++.+++..+.|++ .++|
T Consensus 168 ~d~i~~~~~~~~g~~~~~~~~~i~~l~~~~~~pvi--a~GG 206 (253)
T 1h5y_A 168 AGEILLTSIDRDGTGLGYDVELIRRVADSVRIPVI--ASGG 206 (253)
T ss_dssp CSEEEEEETTTTTTCSCCCHHHHHHHHHHCSSCEE--EESC
T ss_pred CCEEEEecccCCCCcCcCCHHHHHHHHHhcCCCEE--EeCC
Confidence 8999987644311 24566667666677754 4555
No 121
>2jfq_A Glutamate racemase; cell WALL, isomerase, cell shape, peptidoglycan synthesis, peptidoglycan biosynthesis; HET: DGL; 2.15A {Staphylococcus aureus}
Probab=85.63 E-value=6.8 Score=33.63 Aligned_cols=155 Identities=16% Similarity=0.116 Sum_probs=79.5
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHhcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHH
Q 025860 60 GNYGDAITVETLKDFHRRRVQVLVESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECA 139 (247)
Q Consensus 60 g~y~~~~s~~e~~~~~~~q~~~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~ 139 (247)
.+|+. .+.+++.++-.+.++.|.+.|+|+|++=+.+.- ..+++.+++.. ++||+ |. ++.++
T Consensus 59 ~Pyg~-~s~~~i~~~~~~~~~~L~~~g~d~IVIaCNTas---~~~l~~lr~~~-~iPVi-------------gi-~e~a~ 119 (286)
T 2jfq_A 59 CPYGP-RPGEQVKQYTVEIARKLMEFDIKMLVIACNTAT---AVALEYLQKTL-SISVI-------------GV-IEPGA 119 (286)
T ss_dssp CCCTT-SCHHHHHHHHHHHHHHHTTSCCSEEEECCHHHH---HHHHHHHHHHC-SSEEE-------------ES-HHHHH
T ss_pred CCcCC-CCHHHHHHHHHHHHHHHHHCCCCEEEEeCCchh---HHHHHHHHHhC-CCCEE-------------ec-cHHHH
Confidence 35654 578999999999999999999999998654321 12466677654 68877 21 13333
Q ss_pred HHHHhCCCCeEEEEcCCChh----HHHHHHHHHHhhcCCCEEEEeCCCCcccccccccccCCCCC-hHHHHHHHHHHHHc
Q 025860 140 SIAESCKRVVSVGINCTPPR----FISGLILIIKKVTAKPILIYPNSGEFYDADRKEWVQNTGVS-DEDFVSYVSKWCEV 214 (247)
Q Consensus 140 ~~~~~~~~~~avG~NC~~p~----~~~~~l~~l~~~~~~pl~vyPNaG~~~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 214 (247)
+.+....+..-|||=.+... ...++++... .+.-+...|..+....-.. .+... ... .+.+.++++.+.+.
T Consensus 120 ~~A~~~~~~~rIgVLaT~~T~~~~~y~~~l~~~~--~~~~v~~~~~~~~v~~ie~-g~~~~-~~~~~~~l~~~~~~l~~~ 195 (286)
T 2jfq_A 120 RTAIMTTRNQNVLVLGTEGTIKSEAYRTHIKRIN--PHVEVHGVACPGFVPLVEQ-MRYSD-PTITSIVIHQTLKRWRNS 195 (286)
T ss_dssp HHHHHHCSSSEEEEEECHHHHHHTHHHHHHHHHC--TTCEEEEEECTTHHHHHHT-TCTTC-HHHHHHHHHHHHGGGTTC
T ss_pred HHHHHhcCCCEEEEEeChHHhcchHHHHHHHHhC--CCCEEEecCCHHHHHHHHc-CCCCC-chhHHHHHHHHHHHHHhC
Confidence 32221123456777666322 2334444321 1333444555443211111 11100 011 23355566666666
Q ss_pred CCeE-EeecCCCChHHHHHHHHHhh
Q 025860 215 GASL-VGGCCRTTPNTIKGIYRTLS 238 (247)
Q Consensus 215 G~~i-IGGCCGt~P~hI~al~~~l~ 238 (247)
|+.. |=||-.- |--...+.+.+.
T Consensus 196 g~D~IVLGCTh~-p~l~~~i~~~l~ 219 (286)
T 2jfq_A 196 ESDTVILGCTHY-PLLYKPIYDYFG 219 (286)
T ss_dssp SCSEEEEESSSG-GGGHHHHHHHTT
T ss_pred CCCEEEEcCcCH-HHHHHHHHHHcC
Confidence 7554 3346543 334445554443
No 122
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=85.59 E-value=12 Score=32.51 Aligned_cols=116 Identities=15% Similarity=0.077 Sum_probs=66.0
Q ss_pred HhcCCCCEEEEe-cCCC------HHHHHHHHHHHHhhCCCCcEEEEEEEcCCCccc-CCCcHHHHHHHHHhCCCCeEEEE
Q 025860 82 LVESAPDLIAFE-TIPN------KIEAQAYAELLEEENIKIPAWFSFNSKDGVNVV-SGDSLLECASIAESCKRVVSVGI 153 (247)
Q Consensus 82 l~~~gvD~i~~E-T~~~------~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~-~G~~~~~~~~~~~~~~~~~avG~ 153 (247)
.++.|+|.+.+= .+.+ ++|+..+++.+++. ++|+++- +.. +..+. +.+.+..+++...+ .++|.|.+
T Consensus 134 Av~~GAdaV~~~i~~Gs~~~~~~l~~i~~v~~~a~~~--GlpvIie-~~~-G~~~~~d~e~i~~aariA~e-lGAD~VKt 208 (295)
T 3glc_A 134 AVRLNSCAVAAQVYIGSEYEHQSIKNIIQLVDAGMKV--GMPTMAV-TGV-GKDMVRDQRYFSLATRIAAE-MGAQIIKT 208 (295)
T ss_dssp HHHTTCSEEEEEECTTSTTHHHHHHHHHHHHHHHHTT--TCCEEEE-ECC-----CCSHHHHHHHHHHHHH-TTCSEEEE
T ss_pred HHHCCCCEEEEEEECCCCcHHHHHHHHHHHHHHHHHc--CCEEEEE-CCC-CCccCCCHHHHHHHHHHHHH-hCCCEEEe
Confidence 445898887653 2223 34455566666655 5888774 322 22221 21223445555555 69999999
Q ss_pred cCCChhHHHHHHHHHHhhcCCCEEEEeCCCCcccccccccccCCCCChHHHHHHHHHHHHcCCeEEeecCC
Q 025860 154 NCTPPRFISGLILIIKKVTAKPILIYPNSGEFYDADRKEWVQNTGVSDEDFVSYVSKWCEVGASLVGGCCR 224 (247)
Q Consensus 154 NC~~p~~~~~~l~~l~~~~~~pl~vyPNaG~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~iIGGCCG 224 (247)
+-+ ++. ++++....+.|+++ +|-. . .+.++|.+.+++.++.|++ |=..|
T Consensus 209 ~~t-~e~----~~~vv~~~~vPVv~---~GG~----------~--~~~~~~l~~v~~ai~aGA~--Gv~vG 257 (295)
T 3glc_A 209 YYV-EKG----FERIVAGCPVPIVI---AGGK----------K--LPEREALEMCWQAIDQGAS--GVDMG 257 (295)
T ss_dssp ECC-TTT----HHHHHHTCSSCEEE---ECCS----------C--CCHHHHHHHHHHHHHTTCS--EEEES
T ss_pred CCC-HHH----HHHHHHhCCCcEEE---EECC----------C--CCHHHHHHHHHHHHHhCCe--EEEeH
Confidence 966 333 44455455788764 2210 0 1357788888888888886 44444
No 123
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=85.49 E-value=23 Score=32.80 Aligned_cols=93 Identities=12% Similarity=0.170 Sum_probs=55.2
Q ss_pred HHHHHHHhcCCCCEEEEecC-CCHHHHHHHHHHHHhhCCCCcEEE-EEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEE
Q 025860 76 RRRVQVLVESAPDLIAFETI-PNKIEAQAYAELLEEENIKIPAWF-SFNSKDGVNVVSGDSLLECASIAESCKRVVSVGI 153 (247)
Q Consensus 76 ~~q~~~l~~~gvD~i~~ET~-~~~~E~~aa~~~~~~~~~~~pv~i-s~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~ 153 (247)
.++++.++++|+|++.+-+- .+.......++.+++..++.|+++ ++ .+.+.+. .+.+ .|+++|-+
T Consensus 257 ~~~a~~~~~aG~d~v~i~~~~G~~~~~~~~i~~i~~~~~~~pvi~~~v-----------~t~~~a~-~l~~-aGad~I~v 323 (514)
T 1jcn_A 257 KYRLDLLTQAGVDVIVLDSSQGNSVYQIAMVHYIKQKYPHLQVIGGNV-----------VTAAQAK-NLID-AGVDGLRV 323 (514)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCCSHHHHHHHHHHHHHCTTCEEEEEEE-----------CSHHHHH-HHHH-HTCSEEEE
T ss_pred HHHHHHHHHcCCCEEEeeccCCcchhHHHHHHHHHHhCCCCceEeccc-----------chHHHHH-HHHH-cCCCEEEE
Confidence 45788888999999988543 344444556666766533688886 22 3445444 4444 47888855
Q ss_pred c------CC-------C--hhHHHHHHHHHHhhcCCCEEEEeCCC
Q 025860 154 N------CT-------P--PRFISGLILIIKKVTAKPILIYPNSG 183 (247)
Q Consensus 154 N------C~-------~--p~~~~~~l~~l~~~~~~pl~vyPNaG 183 (247)
. |+ + .......+..+.+..+.|++ +++|
T Consensus 324 g~~~G~~~~t~~~~~~g~~~~~~~~~~~~~~~~~~ipVi--a~GG 366 (514)
T 1jcn_A 324 GMGCGSICITQEVMACGRPQGTAVYKVAEYARRFGVPII--ADGG 366 (514)
T ss_dssp CSSCSCCBTTBCCCSCCCCHHHHHHHHHHHHGGGTCCEE--EESC
T ss_pred CCCCCcccccccccCCCccchhHHHHHHHHHhhCCCCEE--EECC
Confidence 2 11 1 12334566666666678854 4444
No 124
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=85.44 E-value=7.3 Score=35.05 Aligned_cols=66 Identities=9% Similarity=0.017 Sum_probs=43.6
Q ss_pred HHHHHHHhcCCCCEEEEec-CCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEE
Q 025860 76 RRRVQVLVESAPDLIAFET-IPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGI 153 (247)
Q Consensus 76 ~~q~~~l~~~gvD~i~~ET-~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~ 153 (247)
.++++.++++|+|++.+-+ ..+.......++.+++...++|+++. .+.+++++. .+.+ .++++|.+
T Consensus 155 ~~~a~~~~~~G~d~i~i~~~~g~~~~~~e~i~~ir~~~~~~pviv~----------~v~~~~~a~-~a~~-~Gad~I~v 221 (404)
T 1eep_A 155 IERVEELVKAHVDILVIDSAHGHSTRIIELIKKIKTKYPNLDLIAG----------NIVTKEAAL-DLIS-VGADCLKV 221 (404)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHHCTTCEEEEE----------EECSHHHHH-HHHT-TTCSEEEE
T ss_pred HHHHHHHHHCCCCEEEEeCCCCChHHHHHHHHHHHHHCCCCeEEEc----------CCCcHHHHH-HHHh-cCCCEEEE
Confidence 4467777889999998753 44445566677777775336898872 123455544 4555 58999988
No 125
>2eja_A URO-D, UPD, uroporphyrinogen decarboxylase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 1.90A {Aquifex aeolicus}
Probab=85.41 E-value=18 Score=31.44 Aligned_cols=138 Identities=9% Similarity=0.014 Sum_probs=85.4
Q ss_pred HHHHHHHHHHHHhcCCCCEE-EEecC---CCHHHHH--------HHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHH
Q 025860 71 LKDFHRRRVQVLVESAPDLI-AFETI---PNKIEAQ--------AYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLEC 138 (247)
Q Consensus 71 ~~~~~~~q~~~l~~~gvD~i-~~ET~---~~~~E~~--------aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~ 138 (247)
+.+...+.++.++++|+|.+ ++++. -+.+..+ .+++.+++. .+.|++ -|++ |. ...
T Consensus 177 i~~~~~~~~~~~~~aGad~i~i~d~~~~~lsp~~f~ef~~p~~k~i~~~i~~~-~g~~~i-~~~~--------g~--~~~ 244 (338)
T 2eja_A 177 LTETVLAYLKEQIKAGADVVQIFDSWVNNLSLEDYGEYVYPYVNYLISELKDF-SDTPVI-YFFR--------GS--SSF 244 (338)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEEETTGGGSCHHHHHHHTHHHHHHHHHHHHHH-CCCCEE-EEES--------SH--HHH
T ss_pred HHHHHHHHHHHHHHhCCCEEEEecCccccCCHHHHHHHhHHHHHHHHHHHhhc-CCCCEE-EEcC--------Cc--HHH
Confidence 44455556666677999987 56764 2444433 344455554 246754 3432 33 446
Q ss_pred HHHHHhCCCCeEEEEcCC-ChhHHHHHHHHHHhhcCCCEEEEeCCCCcccccccccccCCCCChHHHHHHHHHHHHc-CC
Q 025860 139 ASIAESCKRVVSVGINCT-PPRFISGLILIIKKVTAKPILIYPNSGEFYDADRKEWVQNTGVSDEDFVSYVSKWCEV-GA 216 (247)
Q Consensus 139 ~~~~~~~~~~~avG~NC~-~p~~~~~~l~~l~~~~~~pl~vyPNaG~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-G~ 216 (247)
+..+.+ .++++++++-. ++..+.+.+ -+.++-|-- . .... -++++..+.+++.++. |.
T Consensus 245 l~~l~~-~g~d~~~~d~~~dl~~~~~~~---------~~~l~Gn~d----p---~~l~---gt~e~i~~~v~~~l~~~g~ 304 (338)
T 2eja_A 245 IDLAVD-YRADALSVDWSVDIPELFKIY---------DKGFQGNLE----P---AVLY---ASEEVIEEKTLGLLRRIPV 304 (338)
T ss_dssp HHHHTT-SCCSEEECCTTSCHHHHHHHC---------CSEEECCBC----G---GGGG---SCHHHHHHHHHHHHTTCCC
T ss_pred HHHHHH-cCCCEEEeCCCCCHHHHHHhC---------CeEEEECCC----H---HHhc---CCHHHHHHHHHHHHHHhCC
Confidence 666666 58999999864 554333322 234555542 1 1122 2588899999999875 54
Q ss_pred ---eEEeecCC----CChHHHHHHHHHhhCC
Q 025860 217 ---SLVGGCCR----TTPNTIKGIYRTLSNR 240 (247)
Q Consensus 217 ---~iIGGCCG----t~P~hI~al~~~l~~~ 240 (247)
-|++--|| |.|++++++.+++++.
T Consensus 305 ~~g~I~~~g~gi~~~~p~en~~a~v~~v~~~ 335 (338)
T 2eja_A 305 KTRYVFNLGHGLAPDMELEKVKYLVDLVKSF 335 (338)
T ss_dssp SSSEEBCBSSCCCTTSCHHHHHHHHHHHHTC
T ss_pred CCCeEEeCCCCCCCCCCHHHHHHHHHHHHHh
Confidence 57787777 6889999999998764
No 126
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=85.28 E-value=5.8 Score=35.11 Aligned_cols=136 Identities=16% Similarity=0.205 Sum_probs=84.4
Q ss_pred HHHHHHHHHHHHHHhcCCCCEEEEecC-C-----------------CHHHHHHHHHHHHhhCCCCcEEEEEEEcC---CC
Q 025860 69 ETLKDFHRRRVQVLVESAPDLIAFETI-P-----------------NKIEAQAYAELLEEENIKIPAWFSFNSKD---GV 127 (247)
Q Consensus 69 ~e~~~~~~~q~~~l~~~gvD~i~~ET~-~-----------------~~~E~~aa~~~~~~~~~~~pv~is~~~~~---~~ 127 (247)
+...++|.++++ .|+-+|+.|.. . .+...+.+.+++++.+ ..+++++.=.. ..
T Consensus 37 ~~~~~~y~~rA~----gg~Glii~e~~~v~~~g~~~~~~~~i~~d~~i~~~~~~~~~vh~~G--~~i~~Ql~H~Gr~~~~ 110 (349)
T 3hgj_A 37 DWHLLHYPTRAL----GGVGLILVEATAVEPLGRISPYDLGIWSEDHLPGLKELARRIREAG--AVPGIQLAHAGRKAGT 110 (349)
T ss_dssp HHHHHHHHHHHH----TTCSEEEEEEEESSGGGCSSTTSCBCSSGGGHHHHHHHHHHHHHTT--CEEEEEEECCGGGCCB
T ss_pred HHHHHHHHHHhc----CCceEEEecceeecccccCCCCcCccCcHHHHHHHHHHHHHHHhCC--CeEEEEeccCCccccc
Confidence 778889998876 78888988832 1 2345566777777764 56777765211 00
Q ss_pred -----------------------------cccCCCc-------HHHHHHHHHhCCCCeEEEEcCCC---------h----
Q 025860 128 -----------------------------NVVSGDS-------LLECASIAESCKRVVSVGINCTP---------P---- 158 (247)
Q Consensus 128 -----------------------------~l~~G~~-------~~~~~~~~~~~~~~~avG~NC~~---------p---- 158 (247)
+-.+-+. +.++++.+.+ .|.|+|=|||.+ |
T Consensus 111 ~~~~~~~~~~~~~~~~pS~~~~~~~~~~p~~mt~~eI~~ii~~f~~aA~~a~~-aGfDgVEih~a~GyLl~qFlsp~~N~ 189 (349)
T 3hgj_A 111 ARPWEGGKPLGWRVVGPSPIPFDEGYPVPEPLDEAGMERILQAFVEGARRALR-AGFQVIELHMAHGYLLSSFLSPLSNQ 189 (349)
T ss_dssp CCGGGTCCBCCCCCEESSSCCSSTTCCCCEECCHHHHHHHHHHHHHHHHHHHH-TTCCEEEEEECTTSHHHHHHCTTTCC
T ss_pred cccccccccCCCcccCCCcccccCCCCCCccCCHHHHHHHHHHHHHHHHHHHH-cCCCEEEECCccchHHHHhcCCcccc
Confidence 0000011 2233444444 689999999975 3
Q ss_pred -------------hHHHHHHHHHHhhc--CCCEEEEeCCCCcccccccccccCCCCChHHHHHHHHHHHHcCCeEEe
Q 025860 159 -------------RFISGLILIIKKVT--AKPILIYPNSGEFYDADRKEWVQNTGVSDEDFVSYVSKWCEVGASLVG 220 (247)
Q Consensus 159 -------------~~~~~~l~~l~~~~--~~pl~vyPNaG~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~iIG 220 (247)
..+.++++.+++.. +.||++.-+.....+ ...+.+++.+.++.+.+.|+.+|-
T Consensus 190 R~D~yGGslenR~r~~~eiv~aVR~avG~d~pV~vRls~~~~~~---------~g~~~~~~~~la~~L~~~Gvd~i~ 257 (349)
T 3hgj_A 190 RTDAYGGSLENRMRFPLQVAQAVREVVPRELPLFVRVSATDWGE---------GGWSLEDTLAFARRLKELGVDLLD 257 (349)
T ss_dssp CCSTTSSSHHHHHHHHHHHHHHHHHHSCTTSCEEEEEESCCCST---------TSCCHHHHHHHHHHHHHTTCCEEE
T ss_pred cCCCCCcCHHHHHHHHHHHHHHHHHHhcCCceEEEEeccccccC---------CCCCHHHHHHHHHHHHHcCCCEEE
Confidence 13466777777776 789999877643211 113466777888888888877764
No 127
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=85.21 E-value=17 Score=31.20 Aligned_cols=152 Identities=12% Similarity=0.146 Sum_probs=79.7
Q ss_pred CCeEEEEecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCEEEEec---------CCCHHHHHHHHHH
Q 025860 37 RPILVAASVGSYGAYLADGSEYSGNYGDAITVETLKDFHRRRVQVLVESAPDLIAFET---------IPNKIEAQAYAEL 107 (247)
Q Consensus 37 ~~~~VaGsiGP~g~~l~~g~eY~g~y~~~~s~~e~~~~~~~q~~~l~~~gvD~i~~ET---------~~~~~E~~aa~~~ 107 (247)
.+.+|.|-|=-+..++.||..| .+.+.+.+ +++.+++.|+|+|=+-. ++.-+|++-++..
T Consensus 4 ~~~~imgilN~TpDSFsdgg~~-------~~~~~a~~----~a~~~v~~GAdiIDIGgestrpga~~v~~~eE~~Rv~pv 72 (280)
T 1eye_A 4 APVQVMGVLNVTDDSFSDGGCY-------LDLDDAVK----HGLAMAAAGAGIVDVGGESSRPGATRVDPAVETSRVIPV 72 (280)
T ss_dssp -CCEEEEEEECSCCTTCSSCCC-------CSHHHHHH----HHHHHHHTTCSEEEEECC--------------HHHHHHH
T ss_pred CCcEEEEEEeCCCCCcCCCccc-------CCHHHHHH----HHHHHHHCCCCEEEECCccCCCCCCCCCHHHHHHHHHHH
Confidence 3567888887777777776543 35566665 66777789999995553 2235667666665
Q ss_pred HHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEE-EEcCCC-hhHHHHHHHHHHhhcCCCEEEEeCCCCc
Q 025860 108 LEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSV-GINCTP-PRFISGLILIIKKVTAKPILIYPNSGEF 185 (247)
Q Consensus 108 ~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~av-G~NC~~-p~~~~~~l~~l~~~~~~pl~vyPNaG~~ 185 (247)
++.... ..+.+|+... . .++++...+. |++.| -+|-.. -+.|.+++.. .+.|+++.++.|.+
T Consensus 73 i~~l~~-~~~piSIDT~---------~-~~va~aAl~a-Ga~iINdvsg~~~d~~m~~~~a~----~~~~vVlmh~~G~p 136 (280)
T 1eye_A 73 VKELAA-QGITVSIDTM---------R-ADVARAALQN-GAQMVNDVSGGRADPAMGPLLAE----ADVPWVLMHWRAVS 136 (280)
T ss_dssp HHHHHH-TTCCEEEECS---------C-HHHHHHHHHT-TCCEEEETTTTSSCTTHHHHHHH----HTCCEEEECCCCSC
T ss_pred HHHhhc-CCCEEEEeCC---------C-HHHHHHHHHc-CCCEEEECCCCCCCHHHHHHHHH----hCCeEEEEcCCCCC
Confidence 554310 1344566432 1 3344444442 55433 233321 2345555443 37899999998764
Q ss_pred ccccc--cccccCCCCC--hHHHHHHHHHHHHcCCe
Q 025860 186 YDADR--KEWVQNTGVS--DEDFVSYVSKWCEVGAS 217 (247)
Q Consensus 186 ~d~~~--~~~~~~~~~~--~~~~~~~~~~~~~~G~~ 217 (247)
.+... ..|.. ... -+.+.+.+....+.|+.
T Consensus 137 ~tm~~~~~~y~d--v~~~v~~~l~~~i~~a~~~Gi~ 170 (280)
T 1eye_A 137 ADTPHVPVRYGN--VVAEVRADLLASVADAVAAGVD 170 (280)
T ss_dssp TTCTTSCCCCSS--HHHHHHHHHHHHHHHHHHTTCC
T ss_pred cchhhcCcchhH--HHHHHHHHHHHHHHHHHHcCCC
Confidence 32211 01110 000 23455666677788886
No 128
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=85.17 E-value=5.1 Score=34.60 Aligned_cols=99 Identities=9% Similarity=0.040 Sum_probs=61.9
Q ss_pred HHHHHhcCCCCEEEEecCCC-H--------------HHHHHHHHHHHhhCCCCcEEEEEE----EcCCCcccCCCcHHHH
Q 025860 78 RVQVLVESAPDLIAFETIPN-K--------------IEAQAYAELLEEENIKIPAWFSFN----SKDGVNVVSGDSLLEC 138 (247)
Q Consensus 78 q~~~l~~~gvD~i~~ET~~~-~--------------~E~~aa~~~~~~~~~~~pv~is~~----~~~~~~l~~G~~~~~~ 138 (247)
-++.+.++|+|.+-+=.-.+ . +.++.+++.+++.+ +++-+.+. +.+.++. +=+.+.+.
T Consensus 85 ~i~~a~~ag~~~v~i~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~G--~~v~~~l~~~~~~~~~~~~-~~~~~~~~ 161 (298)
T 2cw6_A 85 GFEAAVAAGAKEVVIFGAASELFTKKNINCSIEESFQRFDAILKAAQSAN--ISVRGYVSCALGCPYEGKI-SPAKVAEV 161 (298)
T ss_dssp HHHHHHHTTCSEEEEEEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHTT--CEEEEEEETTTCBTTTBSC-CHHHHHHH
T ss_pred hHHHHHHCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCC--CeEEEEEEEEeeCCcCCCC-CHHHHHHH
Confidence 46667789999886633222 1 35566677778774 55554443 2333332 22334455
Q ss_pred HHHHHhCCCCeEEEEcCC----ChhHHHHHHHHHHhhc-CCCEEEEe
Q 025860 139 ASIAESCKRVVSVGINCT----PPRFISGLILIIKKVT-AKPILIYP 180 (247)
Q Consensus 139 ~~~~~~~~~~~avG~NC~----~p~~~~~~l~~l~~~~-~~pl~vyP 180 (247)
++.+.+ .|++.|.+.=+ .|+.+..+++.+++.. +.||.+..
T Consensus 162 ~~~~~~-~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~i~~H~ 207 (298)
T 2cw6_A 162 TKKFYS-MGCYEISLGDTIGVGTPGIMKDMLSAVMQEVPLAALAVHC 207 (298)
T ss_dssp HHHHHH-TTCSEEEEEETTSCCCHHHHHHHHHHHHHHSCGGGEEEEE
T ss_pred HHHHHH-cCCCEEEecCCCCCcCHHHHHHHHHHHHHhCCCCeEEEEE
Confidence 555565 58888777633 5999999999998876 46777665
No 129
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=84.99 E-value=4.7 Score=33.29 Aligned_cols=99 Identities=10% Similarity=-0.012 Sum_probs=58.1
Q ss_pred HHHHHhcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCc-c-----cCCCcHHHHHHHHHhCCCCeEE
Q 025860 78 RVQVLVESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVN-V-----VSGDSLLECASIAESCKRVVSV 151 (247)
Q Consensus 78 q~~~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~-l-----~~G~~~~~~~~~~~~~~~~~av 151 (247)
+++.+.+.|+|.+++=+.. +.+-..+.++ ++.+ ..+.++++++.+.. + .++.+..+.++.+.+ .++..|
T Consensus 87 ~~~~~~~~Gad~V~lg~~~-l~~p~~~~~~-~~~g--~~i~~~~d~~~~~v~~~g~~~~~~~~~~e~~~~~~~-~G~~~i 161 (241)
T 1qo2_A 87 YAEKLRKLGYRRQIVSSKV-LEDPSFLKSL-REID--VEPVFSLDTRGGRVAFKGWLAEEEIDPVSLLKRLKE-YGLEEI 161 (241)
T ss_dssp HHHHHHHTTCCEEEECHHH-HHCTTHHHHH-HTTT--CEEEEEEEEETTEECCTTCSSCSCCCHHHHHHHHHT-TTCCEE
T ss_pred HHHHHHHCCCCEEEECchH-hhChHHHHHH-HHcC--CcEEEEEEecCCEEEECCceecCCCCHHHHHHHHHh-CCCCEE
Confidence 4555666899999875532 2222223333 4443 35666777653211 1 133477787777766 588989
Q ss_pred EEcCCChhHH-----HHHHHHHHhhcCCCEEEEeCCC
Q 025860 152 GINCTPPRFI-----SGLILIIKKVTAKPILIYPNSG 183 (247)
Q Consensus 152 G~NC~~p~~~-----~~~l~~l~~~~~~pl~vyPNaG 183 (247)
.++-.....+ ..+++++++..+.|++ .++|
T Consensus 162 ~~t~~~~~g~~~g~~~~~i~~l~~~~~iPvi--a~GG 196 (241)
T 1qo2_A 162 VHTEIEKDGTLQEHDFSLTKKIAIEAEVKVL--AAGG 196 (241)
T ss_dssp EEEETTHHHHTCCCCHHHHHHHHHHHTCEEE--EESS
T ss_pred EEEeecccccCCcCCHHHHHHHHHhcCCcEE--EECC
Confidence 9887543222 4677777777788854 4555
No 130
>3dxi_A Putative aldolase; TIM barrel, 11107N, PSI2, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Bacteroides vulgatus atcc 8482}
Probab=84.94 E-value=12 Score=32.82 Aligned_cols=92 Identities=14% Similarity=0.056 Sum_probs=55.8
Q ss_pred hcCCCCEEEEec-CCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEEcCC----C
Q 025860 83 VESAPDLIAFET-IPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGINCT----P 157 (247)
Q Consensus 83 ~~~gvD~i~~ET-~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~NC~----~ 157 (247)
.+.|||.|.+=+ ..+++++..+++.+++.+ ..+.+++.... +....-.-+..+. .+ + .|++.|.+.=+ .
T Consensus 97 ~~~Gvd~~ri~~~~~nle~~~~~v~~ak~~G--~~v~~~~~~~~-~~~~~~~~l~~~~-~~-~-~G~~~i~l~Dt~G~~~ 170 (320)
T 3dxi_A 97 IIGLVDMIRIAIDPQNIDRAIVLAKAIKTMG--FEVGFNVMYMS-KWAEMNGFLSKLK-AI-D-KIADLFCMVDSFGGIT 170 (320)
T ss_dssp GTTTCSEEEEEECGGGHHHHHHHHHHHHTTT--CEEEEEECCTT-TGGGSTTSGGGGG-GG-T-TTCSEEEEECTTSCCC
T ss_pred hhcCCCEEEEEecHHHHHHHHHHHHHHHHCC--CEEEEEEEeCC-CCCCHHHHHHHHH-Hh-h-CCCCEEEECcccCCCC
Confidence 348999986554 344567777777777764 55544443211 1111111222222 22 3 47888888764 3
Q ss_pred hhHHHHHHHHHHhhcCCCEEEEe
Q 025860 158 PRFISGLILIIKKVTAKPILIYP 180 (247)
Q Consensus 158 p~~~~~~l~~l~~~~~~pl~vyP 180 (247)
|..+..+++.+++..+.||.+..
T Consensus 171 P~~~~~lv~~l~~~~~~~i~~H~ 193 (320)
T 3dxi_A 171 PKEVKNLLKEVRKYTHVPVGFHG 193 (320)
T ss_dssp HHHHHHHHHHHHHHCCSCEEEEC
T ss_pred HHHHHHHHHHHHHhCCCeEEEEe
Confidence 99999999999988878876654
No 131
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=84.91 E-value=19 Score=31.52 Aligned_cols=160 Identities=9% Similarity=0.093 Sum_probs=85.3
Q ss_pred CeEEEEecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCEEEEe---cCCC----------HHHHH--
Q 025860 38 PILVAASVGSYGAYLADGSEYSGNYGDAITVETLKDFHRRRVQVLVESAPDLIAFE---TIPN----------KIEAQ-- 102 (247)
Q Consensus 38 ~~~VaGsiGP~g~~l~~g~eY~g~y~~~~s~~e~~~~~~~q~~~l~~~gvD~i~~E---T~~~----------~~E~~-- 102 (247)
+.+|-|-|-++...+.| .| .+.+++.+ +++.+++.|+|+|=+- |-|. -+|++
T Consensus 27 ~~~vMGIlNvTpDSFsd------~~---~~~~~al~----~A~~~v~~GAdIIDIGgeSTrPga~~~~~~V~~~eE~~Rv 93 (314)
T 3tr9_A 27 EPAVMGIINVSPNSFYH------PH---LDLNSALR----TAEKMVDEGADILDIGGEATNPFVDIKTDSPSTQIELDRL 93 (314)
T ss_dssp SCEEEEEEECSTTCSBC------BC---CSHHHHHH----HHHHHHHTTCSEEEEECCCSCTTC-----CHHHHHHHHHH
T ss_pred CcEEEEEEeCCCCchhh------cc---CCHHHHHH----HHHHHHHCCCCEEEECCCCCCCCcccccCCCCHHHHHHHH
Confidence 46788888888776654 22 35666665 7777888999999664 4442 34544
Q ss_pred -HHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEE-EEcCCChhHHHHHHHHHHhhcCCCEEEEe
Q 025860 103 -AYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSV-GINCTPPRFISGLILIIKKVTAKPILIYP 180 (247)
Q Consensus 103 -aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~av-G~NC~~p~~~~~~l~~l~~~~~~pl~vyP 180 (247)
.+++.+++. ..+.+|+...+ .++++...+. |++.| -+|...-+.|.+++.. .+.|+++.+
T Consensus 94 ~pvI~~l~~~---~~vpISIDT~~----------~~Va~aAl~a-Ga~iINDVsg~~~~~m~~v~a~----~g~~vVlMh 155 (314)
T 3tr9_A 94 LPVIDAIKKR---FPQLISVDTSR----------PRVMREAVNT-GADMINDQRALQLDDALTTVSA----LKTPVCLMH 155 (314)
T ss_dssp HHHHHHHHHH---CCSEEEEECSC----------HHHHHHHHHH-TCCEEEETTTTCSTTHHHHHHH----HTCCEEEEC
T ss_pred HHHHHHHHhh---CCCeEEEeCCC----------HHHHHHHHHc-CCCEEEECCCCCchHHHHHHHH----hCCeEEEEC
Confidence 344555543 24566774321 2333333332 55432 2222222244455443 368999999
Q ss_pred CCCCccccc-ccccccCCCCChHHHHHHHHHHHHcCC---eEE---eec---CCCChHH
Q 025860 181 NSGEFYDAD-RKEWVQNTGVSDEDFVSYVSKWCEVGA---SLV---GGC---CRTTPNT 229 (247)
Q Consensus 181 NaG~~~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~G~---~iI---GGC---CGt~P~h 229 (247)
+.|.+.+.. ...| .--..--+.+.+.+....++|+ +|| |=- -|-+++|
T Consensus 156 ~~G~P~tmq~~~~y-dvv~ev~~~l~~~i~~a~~~GI~~~~IilDPG~G~~~F~Kt~~~ 213 (314)
T 3tr9_A 156 FPSETRKPGSTTHF-YFLQSVKKELQESIQRCKKAGISEDRIIIDPGFGQGNYGKNVSE 213 (314)
T ss_dssp CCCTTCCTTSSCHH-HHHHHHHHHHHHHHHHHHHTTCCGGGEEEECCCCSGGGCCCHHH
T ss_pred CCCCCccccccccc-chHHHHHHHHHHHHHHHHHcCCCHhHEEEeCCCCchhhcCCHHH
Confidence 988653221 0111 0000001335556677788898 466 321 3456664
No 132
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=84.77 E-value=20 Score=31.42 Aligned_cols=121 Identities=16% Similarity=0.111 Sum_probs=62.2
Q ss_pred HHHHHHHHhcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEE-------cCCCcccCCCcHHHHHHHHHhCCC
Q 025860 75 HRRRVQVLVESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAWFSFNS-------KDGVNVVSGDSLLECASIAESCKR 147 (247)
Q Consensus 75 ~~~q~~~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~-------~~~~~l~~G~~~~~~~~~~~~~~~ 147 (247)
-+..+..+.+.|||.++. | ..+. +-+ .++-... .+-++-|+.- .+..+-..|.+++++++ .+
T Consensus 73 l~~~~~~~~~~Gvdavl~-~-~gi~--~d~-~Li~~L~-~~tv~gs~~~ggl~g~~~~~d~~~~~~sVe~Avr-----lG 141 (307)
T 3fok_A 73 LERMAIALSRPGVDGVLG-T-PDII--DDL-AALGLLD-DKIVVGSMNRGGLRGASFEMDDRYTGYNVSSMVD-----RG 141 (307)
T ss_dssp HHHHHHHHHSTTCCEEEE-C-HHHH--HHH-HHTTCCT-TCEEEEECCCCSCTTCTTTTSCCCCSCCHHHHHH-----HT
T ss_pred HHHHHHHHhccCCCEEEE-C-cchh--hcc-cceEEec-CcccccccCccccccCCCCccccccccCHHHHHH-----CC
Confidence 355778888999999985 2 2221 111 1222222 3445545553 12223346678898876 26
Q ss_pred CeEEE----EcCCChhHHHHHHHHHHh------hcCCCEEE----EeC-CCCcccccccccccCCCCChHHHHHHHHHHH
Q 025860 148 VVSVG----INCTPPRFISGLILIIKK------VTAKPILI----YPN-SGEFYDADRKEWVQNTGVSDEDFVSYVSKWC 212 (247)
Q Consensus 148 ~~avG----~NC~~p~~~~~~l~~l~~------~~~~pl~v----yPN-aG~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (247)
+++++ +|=.++.. ...|+.+.+ ..+.|+++ ||- .|...+. .+|+.++..++--.
T Consensus 142 ADaV~~l~~i~~Gs~~e-~~~l~~la~vv~ea~~~GlP~~~ep~~y~r~gg~v~~~----------~dp~~Va~aaRiAa 210 (307)
T 3fok_A 142 VDFAKTLVRINLSDAGT-APTLEATAHAVNEAAAAQLPIMLEPFMSNWVNGKVVND----------LSTDAVIQSVAIAA 210 (307)
T ss_dssp CCEEEEEEEECTTCTTH-HHHHHHHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEC----------CSHHHHHHHHHHHH
T ss_pred CCEEEEEEEECCCChhH-HHHHHHHHHHHHHHHHcCCcEEEEeeccccCCCCcCCC----------CCHHHHHHHHHHHH
Confidence 77766 44444322 233332222 25889766 443 2221111 24665666666666
Q ss_pred HcCCe
Q 025860 213 EVGAS 217 (247)
Q Consensus 213 ~~G~~ 217 (247)
++|+.
T Consensus 211 ELGAD 215 (307)
T 3fok_A 211 GLGND 215 (307)
T ss_dssp TCSSC
T ss_pred HhCCC
Confidence 66666
No 133
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=84.66 E-value=20 Score=31.37 Aligned_cols=150 Identities=11% Similarity=0.079 Sum_probs=90.5
Q ss_pred CCHHHH---HHHHHHHHHHHhcCCCCEEEEecC----------C-----------CH----HHHHHHHHHHHhhCCCCcE
Q 025860 66 ITVETL---KDFHRRRVQVLVESAPDLIAFETI----------P-----------NK----IEAQAYAELLEEENIKIPA 117 (247)
Q Consensus 66 ~s~~e~---~~~~~~q~~~l~~~gvD~i~~ET~----------~-----------~~----~E~~aa~~~~~~~~~~~pv 117 (247)
++.+|+ .+.|.+-++.+.++|.|.|=+--- | ++ .-+..+++++++.- +.|+
T Consensus 134 mt~~eI~~~i~~~~~aA~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v-~~pv 212 (338)
T 1z41_A 134 MSAEKVKETVQEFKQAAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVW-DGPL 212 (338)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHC-CSCE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHc-CCcE
Confidence 565554 557777888888899999954432 1 11 22345566666654 7899
Q ss_pred EEEEEEcCCCcccCCCcHHHH---HHHHHhCCCCeEEEEcCC---------ChhHHHHHHHHHHhhcCCCEEEEeCCCCc
Q 025860 118 WFSFNSKDGVNVVSGDSLLEC---ASIAESCKRVVSVGINCT---------PPRFISGLILIIKKVTAKPILIYPNSGEF 185 (247)
Q Consensus 118 ~is~~~~~~~~l~~G~~~~~~---~~~~~~~~~~~avG~NC~---------~p~~~~~~l~~l~~~~~~pl~vyPNaG~~ 185 (247)
.+-++..+. ...|.+++++ ++.+.+ .+++.|-+-.. .|..-...++.+++..+.|++ .|.|.
T Consensus 213 ~vris~~~~--~~~g~~~~~~~~~a~~l~~-~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi--~~Ggi- 286 (338)
T 1z41_A 213 FVRVSASDY--TDKGLDIADHIGFAKWMKE-QGVDLIDCSSGALVHADINVFPGYQVSFAEKIREQADMATG--AVGMI- 286 (338)
T ss_dssp EEEEECCCC--STTSCCHHHHHHHHHHHHH-TTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHCCEEE--ECSSC-
T ss_pred EEEecCccc--CCCCCCHHHHHHHHHHHHH-cCCCEEEEecCccccCCCCCCccchHHHHHHHHHHCCCCEE--EECCC-
Confidence 988876432 2246666654 444555 57888876442 122335677778877788865 35442
Q ss_pred ccccccccccCCCCChHHHHHHHHHHHHcC-CeEEeecCC--CChHHHHHHHHHhhC
Q 025860 186 YDADRKEWVQNTGVSDEDFVSYVSKWCEVG-ASLVGGCCR--TTPNTIKGIYRTLSN 239 (247)
Q Consensus 186 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G-~~iIGGCCG--t~P~hI~al~~~l~~ 239 (247)
.+++ .+.++++.| +.+|+=.=. ..|+-.+.+++-+..
T Consensus 287 -------------~s~~----~a~~~l~~G~aD~V~iGR~~i~nPdl~~ki~~~~~~ 326 (338)
T 1z41_A 287 -------------TDGS----MAEEILQNGRADLIFIGRELLRDPFFARTAAKQLNT 326 (338)
T ss_dssp -------------CSHH----HHHHHHHTTSCSEEEECHHHHHCTTHHHHHHHHTTC
T ss_pred -------------CCHH----HHHHHHHcCCceEEeecHHHHhCchHHHHHHcCCCc
Confidence 1243 334466666 777763322 367777777766643
No 134
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=84.62 E-value=15 Score=32.24 Aligned_cols=95 Identities=11% Similarity=0.037 Sum_probs=56.9
Q ss_pred HHHHHHHHhcCCCCEEEEecCCC-HHH--HHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEE
Q 025860 75 HRRRVQVLVESAPDLIAFETIPN-KIE--AQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSV 151 (247)
Q Consensus 75 ~~~q~~~l~~~gvD~i~~ET~~~-~~E--~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~av 151 (247)
....+++..+.|+.+.+ =|+.+ +.+ ...-.+.+++...+.|+++++.. |.+.....+.+.. .++++|
T Consensus 75 ~~~~a~aa~~~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~pv~~~i~~--------~~~~~~~~~~~~~-~gad~i 144 (349)
T 1p0k_A 75 NKSLARAASQAGIPLAV-GSQMSALKDPSERLSYEIVRKENPNGLIFANLGS--------EATAAQAKEAVEM-IGANAL 144 (349)
T ss_dssp HHHHHHHHHHHTCCEEC-CCCTTTTTCHHHHHHHHHHHHHCSSSCEEEEEET--------TCCHHHHHHHHHH-TTCSEE
T ss_pred HHHHHHHHHHcCCcEEe-ccchhcccCcccccceehhhhhCCCceeEEeecC--------CCCHHHHHHHHHh-cCCCeE
Confidence 34455556667877643 34432 222 22333445554447899988742 4455555555554 478888
Q ss_pred EEcCCCh----------h--HHHHHHHHHHhhcCCCEEEE
Q 025860 152 GINCTPP----------R--FISGLILIIKKVTAKPILIY 179 (247)
Q Consensus 152 G~NC~~p----------~--~~~~~l~~l~~~~~~pl~vy 179 (247)
-+|+..| . .....++.+++..+.||++.
T Consensus 145 ~i~~~~~~~~~~~~~~~~~~~~~~~i~~vr~~~~~Pv~vK 184 (349)
T 1p0k_A 145 QIHLNVIQEIVMPEGDRSFSGALKRIEQICSRVSVPVIVK 184 (349)
T ss_dssp EEEECTTTTC--------CTTHHHHHHHHHHHCSSCEEEE
T ss_pred EecccchhhhcCCCCCcchHHHHHHHHHHHHHcCCCEEEE
Confidence 8877533 1 14567888888789999886
No 135
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=84.41 E-value=4.1 Score=35.02 Aligned_cols=99 Identities=11% Similarity=0.074 Sum_probs=67.2
Q ss_pred CCHHHHHHHHHHHHHHHhcCCCCEEEE-----ec-CCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHH
Q 025860 66 ITVETLKDFHRRRVQVLVESAPDLIAF-----ET-IPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECA 139 (247)
Q Consensus 66 ~s~~e~~~~~~~q~~~l~~~gvD~i~~-----ET-~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~ 139 (247)
++.+.+++ +++.+++. ||.|++ |. .-+.+|=+.+++.+.+ +.||++.. .+.+..+++
T Consensus 16 iD~~~l~~----lv~~li~~-v~gl~v~GttGE~~~Ls~~Er~~v~~~~~~---rvpviaGv---------g~~~t~~ai 78 (283)
T 2pcq_A 16 LDEEAFRE----LAQALEPL-VDGLLVYGSNGEGVHLTPEERARGLRALRP---RKPFLVGL---------MEETLPQAE 78 (283)
T ss_dssp BCHHHHHH----HHHHHGGG-SSCCEETCTTTTGGGSCHHHHHHHHHTCCC---SSCCEEEE---------CCSSHHHHH
T ss_pred cCHHHHHH----HHHHHHhh-CCEEEECCcCcCchhcCHHHHHHHHHHHHh---CCcEEEeC---------CCCCHHHHH
Confidence 66665555 77778888 988765 32 2346677778887766 68999887 345666666
Q ss_pred HHHHh--CCCCeEEEEcCC---Ch---hHHHHHHHHHHhhcCCCEEEEeCCC
Q 025860 140 SIAES--CKRVVSVGINCT---PP---RFISGLILIIKKVTAKPILIYPNSG 183 (247)
Q Consensus 140 ~~~~~--~~~~~avG~NC~---~p---~~~~~~l~~l~~~~~~pl~vyPNaG 183 (247)
+..+. ..|++++.+-.- .| +.+..-.+.+.+ +.|+++|=+-+
T Consensus 79 ~la~~A~~~Gadavlv~~P~y~~~~~~~~l~~~f~~va~--~lPiilYn~P~ 128 (283)
T 2pcq_A 79 GALLEAKAAGAMALLATPPRYYHGSLGAGLLRYYEALAE--KMPLFLYHVPQ 128 (283)
T ss_dssp HHHHHHHHHTCSEEEECCCCTTGGGTTTHHHHHHHHHHH--HSCEEEEECHH
T ss_pred HHHHHHHhcCCCEEEecCCcCCCCCCHHHHHHHHHHHhc--CCCEEEEeCcc
Confidence 65432 258999888663 23 456666667766 79999998754
No 136
>3cyv_A URO-D, UPD, uroporphyrinogen decarboxylase; alpha/beta barrel, cytoplasm, lyase, porphyrin biosynthesis; 2.80A {Shigella flexneri}
Probab=84.13 E-value=11 Score=33.12 Aligned_cols=142 Identities=12% Similarity=0.086 Sum_probs=79.7
Q ss_pred HHHHHHHHHHHHHhcCCCCEE-EEecCC---CHHHHHH--------HHHHHHhhC--CCCcEEEEEEEcCCCcccCCCcH
Q 025860 70 TLKDFHRRRVQVLVESAPDLI-AFETIP---NKIEAQA--------YAELLEEEN--IKIPAWFSFNSKDGVNVVSGDSL 135 (247)
Q Consensus 70 e~~~~~~~q~~~l~~~gvD~i-~~ET~~---~~~E~~a--------a~~~~~~~~--~~~pv~is~~~~~~~~l~~G~~~ 135 (247)
.+.+...+.++.++++|+|.| ++++.. +.+..+. +++.+++.+ .+.| ++-| |. |.
T Consensus 184 ~l~~~~~~~~~~~~~aGad~i~i~d~~~~~lsp~~f~ef~~p~~k~i~~~i~~~~~~~~~~-ii~~-~~-------g~-- 252 (354)
T 3cyv_A 184 KLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRENDGRRVP-VTLF-TK-------GG-- 252 (354)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEEECTTGGGSCHHHHHHHTHHHHHHHHHHSCSEETTEECC-EEEE-CT-------TT--
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEeCCccccCCHHHHHHHhHHHHHHHHHHHHHhcCCCCCC-EEEE-CC-------CH--
Confidence 345566667777788999987 567533 3333222 222222221 0256 3344 32 11
Q ss_pred HHHHHHHHhCCCCeEEEEcC-CChhHHHHHHHHHHhhcCCCEEEEeCCCCcccccccccccCCCCChHHHHHHHHHHHHc
Q 025860 136 LECASIAESCKRVVSVGINC-TPPRFISGLILIIKKVTAKPILIYPNSGEFYDADRKEWVQNTGVSDEDFVSYVSKWCEV 214 (247)
Q Consensus 136 ~~~~~~~~~~~~~~avG~NC-~~p~~~~~~l~~l~~~~~~pl~vyPNaG~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (247)
...+..+.+ .++++|++-- .+++. +-+.+ ..-+.++-|--. .... .++++..+.+++.++.
T Consensus 253 ~~~l~~l~~-~g~d~i~~d~~~dl~~---~~~~~----g~~~~l~Gn~dp-------~~l~---~t~e~i~~~v~~~l~~ 314 (354)
T 3cyv_A 253 GQWLEAMAE-TGCDALGLDWTTDIAD---ARRRV----GNKVALQGNMDP-------SMLY---APPARIEEEVATILAG 314 (354)
T ss_dssp TTTHHHHHT-TSCSEEECCTTSCHHH---HHHHH----TTTSEEECCBCG-------GGGG---SCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHh-cCCCEEEeCCCCCHHH---HHHHh----CCCeEEEecCCh-------HHhC---CCHHHHHHHHHHHHHH
Confidence 123444555 5799999863 24432 22222 222456655421 1121 3588899999998875
Q ss_pred -CC---eEEeecCC----CChHHHHHHHHHhhCC
Q 025860 215 -GA---SLVGGCCR----TTPNTIKGIYRTLSNR 240 (247)
Q Consensus 215 -G~---~iIGGCCG----t~P~hI~al~~~l~~~ 240 (247)
|. -|++--|| |.|++++++.+++++.
T Consensus 315 ~g~~~g~I~~~g~gi~~~~p~env~a~v~~v~~~ 348 (354)
T 3cyv_A 315 FGHGEGHVFNLGHGIHQDVPPEHAGVFVEAVHRL 348 (354)
T ss_dssp TTTSSCEEBCBSSCCCTTSCHHHHHHHHHHHHHH
T ss_pred hCCCCCeEEecCCCCCCCCCHHHHHHHHHHHHHH
Confidence 54 57777787 4689999999887653
No 137
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=84.08 E-value=17 Score=32.37 Aligned_cols=65 Identities=11% Similarity=0.108 Sum_probs=43.2
Q ss_pred HHHHHHHhcCCCCEEEEecCC-CHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEE
Q 025860 76 RRRVQVLVESAPDLIAFETIP-NKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGI 153 (247)
Q Consensus 76 ~~q~~~l~~~gvD~i~~ET~~-~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~ 153 (247)
.++++.++++|+|+|.+.+-. +.......++.+++.. +.|+++... .+.+++.. +.+ .++++|.+
T Consensus 107 ~e~a~~l~eaGad~I~ld~a~G~~~~~~~~i~~i~~~~-~~~Vivg~v----------~t~e~A~~-l~~-aGaD~I~V 172 (361)
T 3khj_A 107 IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSKM-NIDVIVGNV----------VTEEATKE-LIE-NGADGIKV 172 (361)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCSBHHHHHHHHHHHHHC-CCEEEEEEE----------CSHHHHHH-HHH-TTCSEEEE
T ss_pred HHHHHHHHHcCcCeEEEeCCCCCcHHHHHHHHHHHHhc-CCcEEEccC----------CCHHHHHH-HHH-cCcCEEEE
Confidence 357888999999999886543 4455555666666654 689887321 24454444 445 58898887
No 138
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=84.00 E-value=7.3 Score=31.56 Aligned_cols=110 Identities=9% Similarity=0.099 Sum_probs=62.6
Q ss_pred HHHHHhcCCCCEEEEecCC--CH-HHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEEc
Q 025860 78 RVQVLVESAPDLIAFETIP--NK-IEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGIN 154 (247)
Q Consensus 78 q~~~l~~~gvD~i~~ET~~--~~-~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~N 154 (247)
+++.+.+.|+|.+.+-+.. +. .....+++.+++..++.+++++. .+++++.+ +.+ .+++.|+++
T Consensus 80 ~i~~~~~~Gad~v~l~~~~~~~p~~~~~~~i~~~~~~~~~~~v~~~~-----------~t~~e~~~-~~~-~G~d~i~~~ 146 (223)
T 1y0e_A 80 EVDELIESQCEVIALDATLQQRPKETLDELVSYIRTHAPNVEIMADI-----------ATVEEAKN-AAR-LGFDYIGTT 146 (223)
T ss_dssp HHHHHHHHTCSEEEEECSCSCCSSSCHHHHHHHHHHHCTTSEEEEEC-----------SSHHHHHH-HHH-TTCSEEECT
T ss_pred HHHHHHhCCCCEEEEeeecccCcccCHHHHHHHHHHhCCCceEEecC-----------CCHHHHHH-HHH-cCCCEEEeC
Confidence 4555677899999887653 11 23345566666653356766432 24666655 444 579999886
Q ss_pred CC-------C---hhHHHHHHHHHHhhcCCCEEEEeCCCCcccccccccccCCCCChHHHHHHHHHHHHcCCeEEe
Q 025860 155 CT-------P---PRFISGLILIIKKVTAKPILIYPNSGEFYDADRKEWVQNTGVSDEDFVSYVSKWCEVGASLVG 220 (247)
Q Consensus 155 C~-------~---p~~~~~~l~~l~~~~~~pl~vyPNaG~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~iIG 220 (247)
-. . ...-...++++++..+.|++ .++|. .+++ .+.++++.|+..+.
T Consensus 147 ~~g~t~~~~~~~~~~~~~~~~~~~~~~~~ipvi--a~GGI--------------~~~~----~~~~~~~~Gad~v~ 202 (223)
T 1y0e_A 147 LHGYTSYTQGQLLYQNDFQFLKDVLQSVDAKVI--AEGNV--------------ITPD----MYKRVMDLGVHCSV 202 (223)
T ss_dssp TTTSSTTSTTCCTTHHHHHHHHHHHHHCCSEEE--EESSC--------------CSHH----HHHHHHHTTCSEEE
T ss_pred CCcCcCCCCCCCCCcccHHHHHHHHhhCCCCEE--EecCC--------------CCHH----HHHHHHHcCCCEEE
Confidence 42 1 11223466777766677743 44442 1343 34446677876654
No 139
>3ist_A Glutamate racemase; structural genomics, cell WALL biogenesis/degradation, isomerase, peptidoglycan synthesis; HET: MSE; 1.65A {Listeria monocytogenes} PDB: 3hfr_A* 3isv_A*
Probab=83.78 E-value=7.3 Score=33.30 Aligned_cols=52 Identities=21% Similarity=0.262 Sum_probs=39.4
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhcCCCCEEEEecCCCHHHHHH-HHHHHHhhCCCCcEE
Q 025860 61 NYGDAITVETLKDFHRRRVQVLVESAPDLIAFETIPNKIEAQA-YAELLEEENIKIPAW 118 (247)
Q Consensus 61 ~y~~~~s~~e~~~~~~~q~~~l~~~gvD~i~~ET~~~~~E~~a-a~~~~~~~~~~~pv~ 118 (247)
+|+. -|.+++.++-.+.++.|.+.|+|+|++=+-+ +-. +++.+++.. ++|++
T Consensus 43 PYG~-ks~~~i~~~~~~~~~~L~~~g~~~IVIACNT----a~~~al~~lr~~~-~iPvi 95 (269)
T 3ist_A 43 PYGP-RDKEEVAKFTWEMTNFLVDRGIKMLVIACNT----ATAAALYDIREKL-DIPVI 95 (269)
T ss_dssp CCTT-SCHHHHHHHHHHHHHHHHHTTCSEEEECCHH----HHHHHHHHHHHHC-SSCEE
T ss_pred CCCC-CCHHHHHHHHHHHHHHHHHCCCCEEEEeCCC----ccHHHHHHHHHhc-CCCEE
Confidence 4544 6889999999999999999999999975433 222 466677754 68987
No 140
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=83.72 E-value=9.9 Score=31.57 Aligned_cols=85 Identities=11% Similarity=0.033 Sum_probs=51.1
Q ss_pred HHHHHHhcCCCCEEEE-----ecCCCHHHHHHHHHHHHhh-CCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeE
Q 025860 77 RRVQVLVESAPDLIAF-----ETIPNKIEAQAYAELLEEE-NIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVS 150 (247)
Q Consensus 77 ~q~~~l~~~gvD~i~~-----ET~~~~~E~~aa~~~~~~~-~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~a 150 (247)
+.++.+.++|+|++-+ -.+|++..-..+++.+|+. ++++|+-+-+-+.+. ...++.+.+ .|++.
T Consensus 21 ~~i~~l~~~g~d~~h~DVmDg~Fvpn~~~G~~~v~~ir~~~~~~~~~dvhLmv~~p---------~~~i~~~~~-aGad~ 90 (228)
T 3ovp_A 21 AECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPFFDMHMMVSKP---------EQWVKPMAV-AGANQ 90 (228)
T ss_dssp HHHHHHHHTTCSCEEEEEEBSSSSSCBCBCHHHHHHHHHHHCSSSCEEEEEECSCG---------GGGHHHHHH-HTCSE
T ss_pred HHHHHHHHcCCCEEEEEecCCCcCcccccCHHHHHHHHHhhCCCCcEEEEEEeCCH---------HHHHHHHHH-cCCCE
Confidence 3677777899999988 4557776666677778876 246888777665332 122333333 35666
Q ss_pred EEEcCCChhHHHHHHHHHHhh
Q 025860 151 VGINCTPPRFISGLILIIKKV 171 (247)
Q Consensus 151 vG~NC~~p~~~~~~l~~l~~~ 171 (247)
|-|=+-...++...++.+++.
T Consensus 91 itvH~Ea~~~~~~~i~~i~~~ 111 (228)
T 3ovp_A 91 YTFHLEATENPGALIKDIREN 111 (228)
T ss_dssp EEEEGGGCSCHHHHHHHHHHT
T ss_pred EEEccCCchhHHHHHHHHHHc
Confidence 655443223455566655543
No 141
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=83.57 E-value=17 Score=30.34 Aligned_cols=24 Identities=8% Similarity=0.202 Sum_probs=17.6
Q ss_pred hhHHHHHHHHHHhhcCCCEEE--EeC
Q 025860 158 PRFISGLILIIKKVTAKPILI--YPN 181 (247)
Q Consensus 158 p~~~~~~l~~l~~~~~~pl~v--yPN 181 (247)
++....+++.+++..+.|+++ |.|
T Consensus 79 ~~~~~~~i~~ir~~~~~Pv~~m~~~~ 104 (262)
T 1rd5_A 79 MDAVLEMLREVTPELSCPVVLLSYYK 104 (262)
T ss_dssp HHHHHHHHHHHGGGCSSCEEEECCSH
T ss_pred HHHHHHHHHHHHhcCCCCEEEEecCc
Confidence 355567788888878899876 567
No 142
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=83.17 E-value=2.4 Score=35.18 Aligned_cols=99 Identities=12% Similarity=0.118 Sum_probs=55.6
Q ss_pred HHHHHhcCCCCEEEEec--CCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCC-----Ccc-----cCCCcHHHHHHHHHhC
Q 025860 78 RVQVLVESAPDLIAFET--IPNKIEAQAYAELLEEENIKIPAWFSFNSKDG-----VNV-----VSGDSLLECASIAESC 145 (247)
Q Consensus 78 q~~~l~~~gvD~i~~ET--~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~-----~~l-----~~G~~~~~~~~~~~~~ 145 (247)
+++.+++.|+|.+++=+ +.+...++.+++ ..+ .-.+.+++++... -.+ .++.+..+.++.+.+
T Consensus 89 ~~~~~~~~Gad~V~lg~~~l~~p~~~~~~~~---~~~-~~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~- 163 (252)
T 1ka9_F 89 DARKLLLSGADKVSVNSAAVRRPELIRELAD---HFG-AQAVVLAIDARWRGDFPEVHVAGGRVPTGLHAVEWAVKGVE- 163 (252)
T ss_dssp HHHHHHHHTCSEEEECHHHHHCTHHHHHHHH---HHC-GGGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHH-
T ss_pred HHHHHHHcCCCEEEEChHHHhCcHHHHHHHH---HcC-CCcEEEEEEEecCCCCEEEEECCCccccCCcHHHHHHHHHH-
Confidence 55556667899998865 344444444433 332 1234555555321 111 123456666676766
Q ss_pred CCCeEEEEcCCChhH-----HHHHHHHHHhhcCCCEEEEeCCC
Q 025860 146 KRVVSVGINCTPPRF-----ISGLILIIKKVTAKPILIYPNSG 183 (247)
Q Consensus 146 ~~~~avG~NC~~p~~-----~~~~l~~l~~~~~~pl~vyPNaG 183 (247)
.++..|.++....+. -..+++++++..+.|++ .++|
T Consensus 164 ~G~~~i~~~~~~~~g~~~g~~~~~i~~l~~~~~ipvi--a~GG 204 (252)
T 1ka9_F 164 LGAGEILLTSMDRDGTKEGYDLRLTRMVAEAVGVPVI--ASGG 204 (252)
T ss_dssp HTCCEEEEEETTTTTTCSCCCHHHHHHHHHHCSSCEE--EESC
T ss_pred cCCCEEEEecccCCCCcCCCCHHHHHHHHHHcCCCEE--EeCC
Confidence 478888887532211 15677888877788864 4455
No 143
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=83.14 E-value=8 Score=33.17 Aligned_cols=90 Identities=18% Similarity=0.179 Sum_probs=52.8
Q ss_pred HHHHHhcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEE----E-
Q 025860 78 RVQVLVESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSV----G- 152 (247)
Q Consensus 78 q~~~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~av----G- 152 (247)
-++.+.++|||.+++=.+| ++|.....+.+++.+ +..+.-++ .-++.+.+.+......+...+ |
T Consensus 117 f~~~~~~aGvdGvIipDlp-~ee~~~~~~~~~~~g--l~~I~lva--------p~t~~eri~~i~~~~~gfiY~vs~~Gv 185 (271)
T 3nav_A 117 FYQRCQKAGVDSVLIADVP-TNESQPFVAAAEKFG--IQPIFIAP--------PTASDETLRAVAQLGKGYTYLLSRAGV 185 (271)
T ss_dssp HHHHHHHHTCCEEEETTSC-GGGCHHHHHHHHHTT--CEEEEEEC--------TTCCHHHHHHHHHHCCSCEEECCCC--
T ss_pred HHHHHHHCCCCEEEECCCC-HHHHHHHHHHHHHcC--CeEEEEEC--------CCCCHHHHHHHHHHCCCeEEEEeccCC
Confidence 4455667999999987777 477888888888874 44322221 122333333322332333322 1
Q ss_pred --EcCCChhHHHHHHHHHHhhcCCCEEE
Q 025860 153 --INCTPPRFISGLILIIKKVTAKPILI 178 (247)
Q Consensus 153 --~NC~~p~~~~~~l~~l~~~~~~pl~v 178 (247)
..-.-+..+..+++++++..+.|+++
T Consensus 186 TG~~~~~~~~~~~~v~~vr~~~~~Pv~v 213 (271)
T 3nav_A 186 TGAETKANMPVHALLERLQQFDAPPALL 213 (271)
T ss_dssp ------CCHHHHHHHHHHHHTTCCCEEE
T ss_pred CCcccCCchhHHHHHHHHHHhcCCCEEE
Confidence 11112456788999999988899877
No 144
>2vvt_A Glutamate racemase; isomerase, peptidoglycan synthesis, cell WALL biogenesis/degradation, cell shape, benzyl purine, MURI inhibitor; HET: I24 DGL; 1.65A {Enterococcus faecalis} PDB: 2jfp_A* 2jfo_A* 2jfu_A 2jfv_A* 2jfw_A*
Probab=83.13 E-value=13 Score=31.88 Aligned_cols=158 Identities=15% Similarity=0.098 Sum_probs=80.0
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHhcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHH
Q 025860 60 GNYGDAITVETLKDFHRRRVQVLVESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECA 139 (247)
Q Consensus 60 g~y~~~~s~~e~~~~~~~q~~~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~ 139 (247)
.+|+. .+.+++.++..+.++.|.+.|+|+|++=+.+.- ..+++.+++.. ++||+ |. ++.++
T Consensus 61 ~pyG~-~s~~~i~~~~~~~~~~L~~~g~d~IVIACNTas---~~~l~~lr~~~-~iPVi-------------gi-iepa~ 121 (290)
T 2vvt_A 61 CPYGP-RPAEQVVQFTWEMADFLLKKRIKMLVIACNTAT---AVALEEIKAAL-PIPVV-------------GV-ILPGA 121 (290)
T ss_dssp CCCTT-SCHHHHHHHHHHHHHHHHTTTCSEEEECCHHHH---HHHHHHHHHHC-SSCEE-------------ES-SHHHH
T ss_pred CCCCC-CCHHHHHHHHHHHHHHHHHCCCCEEEEeCcchh---HHHHHHHHHhC-CCCEE-------------cc-cHHHH
Confidence 45654 578999999999999999999999998765532 12466677654 68877 21 12333
Q ss_pred HHHHhCCCCeEEEEcCCChhHHHHHHHH-HHhh-cCCCEEEEeCCCCcccccccccccCCCCChHHHHHHHHHHHHcCCe
Q 025860 140 SIAESCKRVVSVGINCTPPRFISGLILI-IKKV-TAKPILIYPNSGEFYDADRKEWVQNTGVSDEDFVSYVSKWCEVGAS 217 (247)
Q Consensus 140 ~~~~~~~~~~avG~NC~~p~~~~~~l~~-l~~~-~~~pl~vyPNaG~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 217 (247)
+.+....+..-|||=.+.........+. +++. .+..+.-.|..+....-. ..+... ....+.+.++++.+.+.|+.
T Consensus 122 ~~A~~~~~~~rIgVLaT~~T~~s~~y~~~l~~~~~~~~v~~~~~~~lv~~ve-~g~~~~-~~~~~~l~~~l~~l~~~g~D 199 (290)
T 2vvt_A 122 RAAVKVTKNNKIGVIGTLGTIKSASYEIAIKSKAPAIEVTSLACPKFVPIVE-SNQYRS-SVAKKIVAETLQALQLKGLD 199 (290)
T ss_dssp HHHHHHCSSSEEEEEECHHHHHTTHHHHHHHTTCTTSEEEEEECTTHHHHHH-TTCTTS-HHHHHHHHHHHGGGTTSCCS
T ss_pred HHHHHhcCCCEEEEEeCcHhhhhHHHHHHHHHhCCCCEEEeccCHHHHHHHH-cCCCCC-HHHHHHHHHHHHHHHhCCCC
Confidence 3332112345677766643222222222 2222 123343345443221111 111110 01123355666666666765
Q ss_pred EEeecCCCChHHHHHHHHHhh
Q 025860 218 LVGGCCRTTPNTIKGIYRTLS 238 (247)
Q Consensus 218 iIGGCCGt~P~hI~al~~~l~ 238 (247)
.|==-|.--|--...|.+.+.
T Consensus 200 ~IVLGCTh~p~l~~~i~~~l~ 220 (290)
T 2vvt_A 200 TLILGCTHYPLLRPVIQNVMG 220 (290)
T ss_dssp EEEECSTTGGGGHHHHHHHHC
T ss_pred EEEECCcCHHHHHHHHHHHcC
Confidence 433234444445555655554
No 145
>3lg3_A Isocitrate lyase; conserved, CD, proteomics evidence (cytopl periplasmic), drug target functions; 1.40A {Yersinia pestis} SCOP: c.1.12.7 PDB: 1igw_A
Probab=82.30 E-value=7.2 Score=35.87 Aligned_cols=75 Identities=15% Similarity=0.092 Sum_probs=46.3
Q ss_pred HHHHHhcCCCCEEEEecC-CCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCc---ccCCCcHHHHHHHHHhCCCCeEEEE
Q 025860 78 RVQVLVESAPDLIAFETI-PNKIEAQAYAELLEEENIKIPAWFSFNSKDGVN---VVSGDSLLECASIAESCKRVVSVGI 153 (247)
Q Consensus 78 q~~~l~~~gvD~i~~ET~-~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~---l~~G~~~~~~~~~~~~~~~~~avG~ 153 (247)
++.++.+ |+|+|++|+. ++++|++.+.+.++... ...+++ +.+.+.-. -.+-+.+......|.+ .|+.-+-+
T Consensus 276 Ra~AY~~-GAD~if~E~~~~~~~ei~~f~~~v~~~~-P~~~La-~~~sPsfnw~~~~~d~~~~~f~~eLa~-lG~~~v~~ 351 (435)
T 3lg3_A 276 RGLAYAP-YADLVWCETSTPDLALAKRFADAVHAQF-PGKLLA-YNCSPSFNWKKNLTDQQIASFQDELSA-MGYKYQFI 351 (435)
T ss_dssp HHHHHGG-GCSEEEECCSSCCHHHHHHHHHHHHHHS-TTCEEE-EECCSSSCHHHHSCHHHHHHHHHHHHH-TTEEEEEE
T ss_pred HHHHHHc-cCCEEEecCCCCCHHHHHHHHHHhcccc-CCeEEE-eCCCCCccccccCCHHHHHHHHHHHHH-cCCcEEEe
Confidence 7888888 9999999996 79999999999988642 122322 32222110 1122334444555665 46665555
Q ss_pred cCC
Q 025860 154 NCT 156 (247)
Q Consensus 154 NC~ 156 (247)
-..
T Consensus 352 ~la 354 (435)
T 3lg3_A 352 TLA 354 (435)
T ss_dssp TTH
T ss_pred CcH
Confidence 553
No 146
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=82.28 E-value=11 Score=36.83 Aligned_cols=100 Identities=13% Similarity=0.007 Sum_probs=65.1
Q ss_pred HHHHHhcCCCCEE-EEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcC---CCcccCCCcHH---HHHHHHHhCCCCeE
Q 025860 78 RVQVLVESAPDLI-AFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKD---GVNVVSGDSLL---ECASIAESCKRVVS 150 (247)
Q Consensus 78 q~~~l~~~gvD~i-~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~---~~~l~~G~~~~---~~~~~~~~~~~~~a 150 (247)
-++.+.++|+|.| +|=..++++.++..++.+++.+ ..+-..++... +. .+...+++ +.++.+.+ .|++.
T Consensus 202 ~i~~a~~~Gvd~irIf~s~n~l~~l~~~i~~ak~~G--~~v~~~i~~~~d~~dp-~r~~~~~e~~~~~a~~l~~-~Ga~~ 277 (718)
T 3bg3_A 202 FCEVAKENGMDVFRVFDSLNYLPNMLLGMEAAGSAG--GVVEAAISYTGDVADP-SRTKYSLQYYMGLAEELVR-AGTHI 277 (718)
T ss_dssp HHHHHHHHTCCEEEEECSSCCHHHHHHHHHHHHTTT--SEEEEEEECCSCTTCT-TCCTTCHHHHHHHHHHHHH-HTCSE
T ss_pred HHHHHHhcCcCEEEEEecHHHHHHHHHHHHHHHHcC--CeEEEEEEeeccccCC-CCCCCCHHHHHHHHHHHHH-cCCCE
Confidence 4455566899987 4556778888888888888875 44443333221 11 11122444 44454555 58888
Q ss_pred EEEcCC----ChhHHHHHHHHHHhhc-CCCEEEEeC
Q 025860 151 VGINCT----PPRFISGLILIIKKVT-AKPILIYPN 181 (247)
Q Consensus 151 vG~NC~----~p~~~~~~l~~l~~~~-~~pl~vyPN 181 (247)
|.+.=+ .|..+..+++.+++.. +.||.+...
T Consensus 278 I~l~DT~G~~~P~~v~~lV~~lk~~~p~~~I~~H~H 313 (718)
T 3bg3_A 278 LCIKDMAGLLKPTACTMLVSSLRDRFPDLPLHIHTH 313 (718)
T ss_dssp EEEECTTSCCCHHHHHHHHHHHHHHSTTCCEEEECC
T ss_pred EEEcCcCCCcCHHHHHHHHHHHHHhCCCCeEEEEEC
Confidence 888654 3999999999999887 678877663
No 147
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=82.13 E-value=24 Score=30.37 Aligned_cols=101 Identities=10% Similarity=-0.025 Sum_probs=64.3
Q ss_pred HHHHHHhcCCCCEEEEe-cCCC--------------HHHHHHHHHHHHhhCCCCcEEEEEEE----cCCCcccCCCcHHH
Q 025860 77 RRVQVLVESAPDLIAFE-TIPN--------------KIEAQAYAELLEEENIKIPAWFSFNS----KDGVNVVSGDSLLE 137 (247)
Q Consensus 77 ~q~~~l~~~gvD~i~~E-T~~~--------------~~E~~aa~~~~~~~~~~~pv~is~~~----~~~~~l~~G~~~~~ 137 (247)
+.++..+++|+|.+-+= ..++ ++.++.+++.+++.+ +.|-..+.. .+.+ -++++.
T Consensus 87 ~~i~~a~~aG~~~v~i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G--~~V~~~l~~~~~~e~~~----~~~~~~ 160 (302)
T 2ftp_A 87 KGFEAALESGVKEVAVFAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQ--VRVRGYISCVLGCPYDG----DVDPRQ 160 (302)
T ss_dssp HHHHHHHHTTCCEEEEEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTT--CEEEEEEECTTCBTTTB----CCCHHH
T ss_pred HHHHHHHhCCcCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCC--CeEEEEEEEEeeCCcCC----CCCHHH
Confidence 35666777999998762 2222 245566777888775 444433332 2222 245555
Q ss_pred HHHHH---HhCCCCeEEEEcC----CChhHHHHHHHHHHhhc-CCCEEEEe--CCCC
Q 025860 138 CASIA---ESCKRVVSVGINC----TPPRFISGLILIIKKVT-AKPILIYP--NSGE 184 (247)
Q Consensus 138 ~~~~~---~~~~~~~avG~NC----~~p~~~~~~l~~l~~~~-~~pl~vyP--NaG~ 184 (247)
+++.+ .+ .+++.|.+-= ..|+.+..+++.+++.. +.||.+.. +.|.
T Consensus 161 ~~~~~~~~~~-~G~d~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~l~~H~Hn~~Gl 216 (302)
T 2ftp_A 161 VAWVARELQQ-MGCYEVSLGDTIGVGTAGATRRLIEAVASEVPRERLAGHFHDTYGQ 216 (302)
T ss_dssp HHHHHHHHHH-TTCSEEEEEESSSCCCHHHHHHHHHHHTTTSCGGGEEEEEBCTTSC
T ss_pred HHHHHHHHHH-cCCCEEEEeCCCCCcCHHHHHHHHHHHHHhCCCCeEEEEeCCCccH
Confidence 55544 35 5888776653 24999999999998877 58899988 5554
No 148
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=81.94 E-value=31 Score=31.63 Aligned_cols=20 Identities=10% Similarity=-0.024 Sum_probs=15.0
Q ss_pred ChHHHHHHHHHHHHcCCeEE
Q 025860 200 SDEDFVSYVSKWCEVGASLV 219 (247)
Q Consensus 200 ~~~~~~~~~~~~~~~G~~iI 219 (247)
+.+++.+.++...+.|+..|
T Consensus 309 ~~ed~~~iA~~~~~aGaDgI 328 (443)
T 1tv5_A 309 NQEQKKEIADVLLETNIDGM 328 (443)
T ss_dssp CHHHHHHHHHHHHHTTCSEE
T ss_pred CHHHHHHHHHHHHHcCCCEE
Confidence 45577788888888887765
No 149
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=81.94 E-value=19 Score=33.09 Aligned_cols=98 Identities=20% Similarity=0.201 Sum_probs=57.7
Q ss_pred CCc-EEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEEcCC-C-----------------h---hHHHHHHHHHHhh
Q 025860 114 KIP-AWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGINCT-P-----------------P---RFISGLILIIKKV 171 (247)
Q Consensus 114 ~~p-v~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~NC~-~-----------------p---~~~~~~l~~l~~~ 171 (247)
++| +++-++.. + +-+.+.++++.+.+ .++++|-+--+ . + .....++..+++.
T Consensus 296 ~~P~V~vKispd----~-~~ed~~~iA~~~~~-aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~ 369 (443)
T 1tv5_A 296 KKPLVFVKLAPD----L-NQEQKKEIADVLLE-TNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNY 369 (443)
T ss_dssp SCCEEEEEECSC----C-CHHHHHHHHHHHHH-TTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEeCCC----C-CHHHHHHHHHHHHH-cCCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHH
Confidence 567 78776421 1 11245666777766 58887654432 1 1 1135677788877
Q ss_pred c--CCCEEEEeCCCCcccccccccccCCCCChHHHHHHHHHHHHcCCeEEeecCC---CChHHHHHHHHHh
Q 025860 172 T--AKPILIYPNSGEFYDADRKEWVQNTGVSDEDFVSYVSKWCEVGASLVGGCCR---TTPNTIKGIYRTL 237 (247)
Q Consensus 172 ~--~~pl~vyPNaG~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~iIGGCCG---t~P~hI~al~~~l 237 (247)
. ++||+. ++|. .++++ +.+.+..||+.|+-+-+ .+|.-++.|.+.+
T Consensus 370 v~~~iPVIg--~GGI--------------~s~~D----A~e~l~aGAd~Vqigrall~~gP~l~~~i~~~l 420 (443)
T 1tv5_A 370 TNKQIPIIA--SGGI--------------FSGLD----ALEKIEAGASVCQLYSCLVFNGMKSAVQIKREL 420 (443)
T ss_dssp TTTCSCEEE--ESSC--------------CSHHH----HHHHHHTTEEEEEESHHHHHHGGGHHHHHHHHH
T ss_pred cCCCCcEEE--ECCC--------------CCHHH----HHHHHHcCCCEEEEcHHHHhcChHHHHHHHHHH
Confidence 6 678543 4442 12433 33455689999986666 3787777776554
No 150
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=81.77 E-value=26 Score=30.70 Aligned_cols=119 Identities=15% Similarity=0.067 Sum_probs=55.0
Q ss_pred CeEEEEecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCEEEEec--------CCCHHHHHHHHHHHH
Q 025860 38 PILVAASVGSYGAYLADGSEYSGNYGDAITVETLKDFHRRRVQVLVESAPDLIAFET--------IPNKIEAQAYAELLE 109 (247)
Q Consensus 38 ~~~VaGsiGP~g~~l~~g~eY~g~y~~~~s~~e~~~~~~~q~~~l~~~gvD~i~~ET--------~~~~~E~~aa~~~~~ 109 (247)
+.+|.|-|--+-.++.||..|. +.+.+.+ +++.+++.|+|+|=+-- ++.-+|++-++.+++
T Consensus 41 ~~~vMGIlNvTPDSFsdgg~~~-------~~~~a~~----~A~~~v~~GAdIIDIGgeSTrPG~~v~~~eEl~Rv~pvI~ 109 (318)
T 2vp8_A 41 RALIMAIVNRTPDSFYDKGATF-------SDAAARD----AVHRAVADGADVIDVGGVKAGPGERVDVDTEITRLVPFIE 109 (318)
T ss_dssp SCEEEEEEC---------------------CHHHHH----HHHHHHHTTCSEEEEC----------CHHHHHHHHHHHHH
T ss_pred CcEEEEEEeCCCCcccCCCccC-------CHHHHHH----HHHHHHHCCCCEEEECCCcCCCCCCCCHHHHHHHHHHHHH
Confidence 4567777766666677765431 3355554 66777889999996552 333667766644443
Q ss_pred hhCCCC-cEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEEcCC---ChhHHHHHHHHHHhhcCCCEEEEeCCCC
Q 025860 110 EENIKI-PAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGINCT---PPRFISGLILIIKKVTAKPILIYPNSGE 184 (247)
Q Consensus 110 ~~~~~~-pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~NC~---~p~~~~~~l~~l~~~~~~pl~vyPNaG~ 184 (247)
...... .+.+|+...+ .++++...+. |++. ||=. .-+.|.+++.+ .+.|+++.++.|.
T Consensus 110 ~l~~~~~~vpISIDT~~----------~~VaeaAl~a-Ga~i--INDVsg~~d~~m~~vaa~----~g~~vVlmh~~G~ 171 (318)
T 2vp8_A 110 WLRGAYPDQLISVDTWR----------AQVAKAACAA-GADL--INDTWGGVDPAMPEVAAE----FGAGLVCAHTGGA 171 (318)
T ss_dssp HHHHHSTTCEEEEECSC----------HHHHHHHHHH-TCCE--EEETTSSSSTTHHHHHHH----HTCEEEEECC---
T ss_pred HHHhhCCCCeEEEeCCC----------HHHHHHHHHh-CCCE--EEECCCCCchHHHHHHHH----hCCCEEEECCCCC
Confidence 321012 4556775321 2333333332 5552 4443 22344444443 3789999998775
No 151
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=81.68 E-value=0.47 Score=39.77 Aligned_cols=100 Identities=13% Similarity=0.120 Sum_probs=19.0
Q ss_pred HHHHHHhcCCCCEEEEecC--CCHHHHHHHHHHHHhhCCCCcEEEEEEEcCC-----Ccc-----cCCCcHHHHHHHHHh
Q 025860 77 RRVQVLVESAPDLIAFETI--PNKIEAQAYAELLEEENIKIPAWFSFNSKDG-----VNV-----VSGDSLLECASIAES 144 (247)
Q Consensus 77 ~q~~~l~~~gvD~i~~ET~--~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~-----~~l-----~~G~~~~~~~~~~~~ 144 (247)
++++.+++.|+|.+++=|- .+... +.++.+.++ .-.++++++++.. -.+ .++.+..+.++.+.+
T Consensus 92 ~~~~~~l~~Gad~V~ig~~~l~dp~~---~~~~~~~~g-~~~iv~~ld~~~~~~~~~v~~~g~~~~~~~~~~~~a~~~~~ 167 (247)
T 3tdn_A 92 EHFLEAFLRGADKVSINTAAVENPSL---ITQIAQTFG-SQAVVVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVVEVEK 167 (247)
T ss_dssp HHHHHHHHTTCSEECCSHHHHHCTHH---HHHHHHHHC------------------------------------------
T ss_pred HHHHHHHHcCCCeeehhhHHhhChHH---HHHHHHHhC-CCcEEEEEEeccCCCCEEEEECCCcccCCCCHHHHHHHHHh
Confidence 3555566789999988763 33332 334444443 2345566665431 111 123445566666655
Q ss_pred CCCCeEEEEcCCChhH-----HHHHHHHHHhhcCCCEEEEeCCC
Q 025860 145 CKRVVSVGINCTPPRF-----ISGLILIIKKVTAKPILIYPNSG 183 (247)
Q Consensus 145 ~~~~~avG~NC~~p~~-----~~~~l~~l~~~~~~pl~vyPNaG 183 (247)
.+++.|.++....+. -..+++.+++..+.|++ .++|
T Consensus 168 -~G~~~i~~t~~~~~g~~~g~~~~~~~~i~~~~~iPvi--a~GG 208 (247)
T 3tdn_A 168 -RGAGEILLTSIDRDGTKSGYDTEMIRFVRPLTTLPII--ASGG 208 (247)
T ss_dssp --------------------------------------------
T ss_pred -cCCCEEEEecccCCCCcCCCCHHHHHHHHHhCCCCEE--EECC
Confidence 578888877653322 13456666666667753 4444
No 152
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=81.66 E-value=8.5 Score=31.75 Aligned_cols=88 Identities=19% Similarity=0.235 Sum_probs=52.1
Q ss_pred HHHHHHHhcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhC-CCCeEEEEc
Q 025860 76 RRRVQVLVESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESC-KRVVSVGIN 154 (247)
Q Consensus 76 ~~q~~~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~-~~~~avG~N 154 (247)
.+.++.+.++|+|.+.+-+++. .+.+..++.+++.+ ..+++.++ -.+..+.++.+... .+...+ +.
T Consensus 98 ~~~~~~~~~~Gad~v~~~~~~~-~~~~~~~~~~~~~g--~~~~~~i~---------~~t~~e~~~~~~~~~d~~i~~-~~ 164 (248)
T 1geq_A 98 RNFLAEAKASGVDGILVVDLPV-FHAKEFTEIAREEG--IKTVFLAA---------PNTPDERLKVIDDMTTGFVYL-VS 164 (248)
T ss_dssp HHHHHHHHHHTCCEEEETTCCG-GGHHHHHHHHHHHT--CEEEEEEC---------TTCCHHHHHHHHHHCSSEEEE-EC
T ss_pred HHHHHHHHHCCCCEEEECCCCh-hhHHHHHHHHHHhC--CCeEEEEC---------CCCHHHHHHHHHhcCCCeEEE-EE
Confidence 4577778889999999987764 56777888888874 56665552 22334444444431 122222 11
Q ss_pred C---CC-----hhHHHHHHHHHHhhcCCCE
Q 025860 155 C---TP-----PRFISGLILIIKKVTAKPI 176 (247)
Q Consensus 155 C---~~-----p~~~~~~l~~l~~~~~~pl 176 (247)
. ++ +......++.+++..+.|+
T Consensus 165 ~~G~~g~~~~~~~~~~~~i~~l~~~~~~pi 194 (248)
T 1geq_A 165 LYGTTGAREEIPKTAYDLLRRAKRICRNKV 194 (248)
T ss_dssp CC-------CCCHHHHHHHHHHHHHCSSCE
T ss_pred CCccCCCCCCCChhHHHHHHHHHhhcCCCE
Confidence 1 11 1334567788877777774
No 153
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=81.56 E-value=25 Score=30.91 Aligned_cols=150 Identities=15% Similarity=0.057 Sum_probs=92.6
Q ss_pred CCHHH---HHHHHHHHHHHHhcCCCCEEEEecC---------------------CCH-HHH---HHHHHHHHhhCCCCcE
Q 025860 66 ITVET---LKDFHRRRVQVLVESAPDLIAFETI---------------------PNK-IEA---QAYAELLEEENIKIPA 117 (247)
Q Consensus 66 ~s~~e---~~~~~~~q~~~l~~~gvD~i~~ET~---------------------~~~-~E~---~aa~~~~~~~~~~~pv 117 (247)
+|.+| +.+.|.+-++.+.++|.|.|=+--- .++ ..+ ..+++++++.- +.||
T Consensus 134 mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~v-~~pv 212 (340)
T 3gr7_A 134 MTKADIEETVQAFQNGARRAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVW-DGPL 212 (340)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHC-CSCE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHhc-CCce
Confidence 56555 5567888888888899999855422 111 133 34556666654 7899
Q ss_pred EEEEEEcCCCcccCCC---cHHHHHHHHHhCCCCeEEEEcCC---------ChhHHHHHHHHHHhhcCCCEEEEeCCCCc
Q 025860 118 WFSFNSKDGVNVVSGD---SLLECASIAESCKRVVSVGINCT---------PPRFISGLILIIKKVTAKPILIYPNSGEF 185 (247)
Q Consensus 118 ~is~~~~~~~~l~~G~---~~~~~~~~~~~~~~~~avG~NC~---------~p~~~~~~l~~l~~~~~~pl~vyPNaG~~ 185 (247)
++-++..+- ...|. ...+.++.+.+ .+++.|=+-.. .+..-..+++.+++..+.|+++ |+|.
T Consensus 213 ~vRls~~~~--~~~g~~~~~~~~la~~L~~-~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik~~~~iPVi~--~GgI- 286 (340)
T 3gr7_A 213 FVRISASDY--HPDGLTAKDYVPYAKRMKE-QGVDLVDVSSGAIVPARMNVYPGYQVPFAELIRREADIPTGA--VGLI- 286 (340)
T ss_dssp EEEEESCCC--STTSCCGGGHHHHHHHHHH-TTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHTTCCEEE--ESSC-
T ss_pred EEEeccccc--cCCCCCHHHHHHHHHHHHH-cCCCEEEEecCCccCCCCCCCccccHHHHHHHHHHcCCcEEe--eCCC-
Confidence 998886432 12343 44556666666 58888877542 2333456778888888888654 3332
Q ss_pred ccccccccccCCCCChHHHHHHHHHHHHcC-CeEEeecCC--CChHHHHHHHHHhhC
Q 025860 186 YDADRKEWVQNTGVSDEDFVSYVSKWCEVG-ASLVGGCCR--TTPNTIKGIYRTLSN 239 (247)
Q Consensus 186 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G-~~iIGGCCG--t~P~hI~al~~~l~~ 239 (247)
.+++ .+.+.++.| +.+|+=+=. ..|+-.+.+++.+..
T Consensus 287 -------------~s~e----~a~~~L~~G~aD~V~iGR~~lanPdl~~ki~~~l~~ 326 (340)
T 3gr7_A 287 -------------TSGW----QAEEILQNGRADLVFLGRELLRNPYWPYAAARELGA 326 (340)
T ss_dssp -------------CCHH----HHHHHHHTTSCSEEEECHHHHHCTTHHHHHHHHTTC
T ss_pred -------------CCHH----HHHHHHHCCCeeEEEecHHHHhCchHHHHHHHHCCC
Confidence 1233 344567777 887764433 478888888777653
No 154
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=81.41 E-value=0.86 Score=39.73 Aligned_cols=37 Identities=27% Similarity=0.303 Sum_probs=30.9
Q ss_pred HHHHHHhcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEE
Q 025860 77 RRVQVLVESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAW 118 (247)
Q Consensus 77 ~q~~~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~ 118 (247)
++++++.++|+|.|++|.+++.+|++.+.+.+ +.|+.
T Consensus 172 ~Ra~ay~eAGAd~i~~e~~~~~~~~~~i~~~~-----~~P~i 208 (287)
T 3b8i_A 172 QRTLAYQEAGADGICLVGVRDFAHLEAIAEHL-----HIPLM 208 (287)
T ss_dssp HHHHHHHHTTCSEEEEECCCSHHHHHHHHTTC-----CSCEE
T ss_pred HHHHHHHHcCCCEEEecCCCCHHHHHHHHHhC-----CCCEE
Confidence 38889999999999999999999988765533 47887
No 155
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=81.40 E-value=3 Score=34.37 Aligned_cols=99 Identities=9% Similarity=0.065 Sum_probs=56.3
Q ss_pred HHHHHHhcCCCCEEEEec--CCCHHHHHHHHHHHHhhCCCCcEEEEEEEc----C-CCcccCC----CcHHHHHHHHHhC
Q 025860 77 RRVQVLVESAPDLIAFET--IPNKIEAQAYAELLEEENIKIPAWFSFNSK----D-GVNVVSG----DSLLECASIAESC 145 (247)
Q Consensus 77 ~q~~~l~~~gvD~i~~ET--~~~~~E~~aa~~~~~~~~~~~pv~is~~~~----~-~~~l~~G----~~~~~~~~~~~~~ 145 (247)
++++.+++.|+|.+.+=+ +.++..+.. ..+..+ ..+.+++++. + .-.+..+ .++.+.++.+.+
T Consensus 87 ~~~~~~l~~Gad~V~lg~~~l~~p~~~~~---~~~~~g--~~~~~~ld~~~~~~~~~v~~~g~~~~~~~~~e~~~~~~~- 160 (244)
T 2y88_A 87 ESLAAALATGCARVNVGTAALENPQWCAR---VIGEHG--DQVAVGLDVQIIDGEHRLRGRGWETDGGDLWDVLERLDS- 160 (244)
T ss_dssp HHHHHHHHTTCSEEEECHHHHHCHHHHHH---HHHHHG--GGEEEEEEEEEETTEEEEEEGGGTEEEEEHHHHHHHHHH-
T ss_pred HHHHHHHHcCCCEEEECchHhhChHHHHH---HHHHcC--CCEEEEEeccccCCCCEEEECCccCCCCCHHHHHHHHHh-
Confidence 467777889999998754 344443433 444443 2355555543 1 1112211 155666666766
Q ss_pred CCCeEEEEcCCChh-----HHHHHHHHHHhhcCCCEEEEeCCC
Q 025860 146 KRVVSVGINCTPPR-----FISGLILIIKKVTAKPILIYPNSG 183 (247)
Q Consensus 146 ~~~~avG~NC~~p~-----~~~~~l~~l~~~~~~pl~vyPNaG 183 (247)
.+++.|.++-..+. .-..+++.+++..+.|+ ..|+|
T Consensus 161 ~G~~~i~~~~~~~~~~~~g~~~~~~~~l~~~~~ipv--ia~GG 201 (244)
T 2y88_A 161 EGCSRFVVTDITKDGTLGGPNLDLLAGVADRTDAPV--IASGG 201 (244)
T ss_dssp TTCCCEEEEETTTTTTTSCCCHHHHHHHHTTCSSCE--EEESC
T ss_pred CCCCEEEEEecCCccccCCCCHHHHHHHHHhCCCCE--EEECC
Confidence 57888888774321 23457777776667775 44555
No 156
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=81.36 E-value=12 Score=30.52 Aligned_cols=120 Identities=10% Similarity=0.115 Sum_probs=67.8
Q ss_pred HHHHHHhcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEEcCC
Q 025860 77 RRVQVLVESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGINCT 156 (247)
Q Consensus 77 ~q~~~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~NC~ 156 (247)
++++..+++|+|++..- ... ..+++..++. +.|+++.. .++.++.+... .+++.|++==.
T Consensus 74 d~~~~A~~~GAd~v~~~---~~d--~~v~~~~~~~--g~~~i~G~-----------~t~~e~~~A~~--~Gad~v~~fpa 133 (207)
T 2yw3_A 74 KEAEAALEAGAAFLVSP---GLL--EEVAALAQAR--GVPYLPGV-----------LTPTEVERALA--LGLSALKFFPA 133 (207)
T ss_dssp HHHHHHHHHTCSEEEES---SCC--HHHHHHHHHH--TCCEEEEE-----------CSHHHHHHHHH--TTCCEEEETTT
T ss_pred HHHHHHHHcCCCEEEcC---CCC--HHHHHHHHHh--CCCEEecC-----------CCHHHHHHHHH--CCCCEEEEecC
Confidence 46777777899998643 221 3344555665 46766552 14677776554 48999999211
Q ss_pred ChhHHHHHHHHHHhhc-CCCEEEEeCCCCcccccccccccCCCCChHHHHHHHHHHHHcCCeEEeec---CCCChHHHHH
Q 025860 157 PPRFISGLILIIKKVT-AKPILIYPNSGEFYDADRKEWVQNTGVSDEDFVSYVSKWCEVGASLVGGC---CRTTPNTIKG 232 (247)
Q Consensus 157 ~p~~~~~~l~~l~~~~-~~pl~vyPNaG~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~iIGGC---CGt~P~hI~a 232 (247)
.+-.-...|+.++... +.|+ .|=+|. ++ +.+.+|++.|+..++.- |.-.++.|++
T Consensus 134 ~~~gG~~~lk~l~~~~~~ipv--vaiGGI---------------~~----~n~~~~l~aGa~~vavgSai~~~d~~~i~~ 192 (207)
T 2yw3_A 134 EPFQGVRVLRAYAEVFPEVRF--LPTGGI---------------KE----EHLPHYAALPNLLAVGGSWLLQGNLEAVRA 192 (207)
T ss_dssp TTTTHHHHHHHHHHHCTTCEE--EEBSSC---------------CG----GGHHHHHTCSSBSCEEESGGGSSCHHHHHH
T ss_pred ccccCHHHHHHHHhhCCCCcE--EEeCCC---------------CH----HHHHHHHhCCCcEEEEehhhhCCCHHHHHH
Confidence 1110245677777665 5664 344442 23 24455888876554432 2244566776
Q ss_pred HHHHh
Q 025860 233 IYRTL 237 (247)
Q Consensus 233 l~~~l 237 (247)
.++.+
T Consensus 193 ~a~~~ 197 (207)
T 2yw3_A 193 KVRAA 197 (207)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 65544
No 157
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=81.14 E-value=24 Score=29.79 Aligned_cols=149 Identities=12% Similarity=0.102 Sum_probs=78.3
Q ss_pred CHHHHHHHHHHHHHHHhcCCCCEE-----EEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCC-CcccCCCc--HHHH
Q 025860 67 TVETLKDFHRRRVQVLVESAPDLI-----AFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDG-VNVVSGDS--LLEC 138 (247)
Q Consensus 67 s~~e~~~~~~~q~~~l~~~gvD~i-----~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~-~~l~~G~~--~~~~ 138 (247)
+.+++.. +++.+.+.|+|++ +++.+++..++...+..+++.-.++|+++++-...+ |...++.. -.+.
T Consensus 30 ~~~e~~~----~~~~~~~~~~D~vElRvD~l~~~~~~~~v~~~l~~lr~~~~~~PiI~T~Rt~~eGG~~~~~~~~~~~~l 105 (257)
T 2yr1_A 30 DDRKVLR----EAEEVCRKQPDLLEWRADFFRAIDDQERVLATANGLRNIAGEIPILFTIRSEREGGQPIPLNEAEVRRL 105 (257)
T ss_dssp SHHHHHH----HHHHHHHSCCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHSSSCCEEEECCCTTTTCCCCSSCHHHHHHH
T ss_pred CHHHHHH----HHHHHhhcCCCEEEEEeecccccCcHHHHHHHHHHHHHhccCCCEEEEEeecccCCCCCCCCHHHHHHH
Confidence 4566554 4555556788887 457777777787778777775336899988876544 33323322 1223
Q ss_pred HHHHHhCCCCeEEEEcCCChhHHHHHHHHHHhhcCCCEEE-EeCCCCcccccccccccCCCCChHHHHHHHHHHHHcCCe
Q 025860 139 ASIAESCKRVVSVGINCTPPRFISGLILIIKKVTAKPILI-YPNSGEFYDADRKEWVQNTGVSDEDFVSYVSKWCEVGAS 217 (247)
Q Consensus 139 ~~~~~~~~~~~avG~NC~~p~~~~~~l~~l~~~~~~pl~v-yPNaG~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 217 (247)
.+.+.....++.|=|--..++.+..+++..++. +..+++ |=|- .. ..+.+++.+...+..+.|+.
T Consensus 106 l~~~~~~g~~d~iDvEl~~~~~~~~l~~~~~~~-~~kvI~S~Hdf-----------~~--tP~~~el~~~~~~~~~~gaD 171 (257)
T 2yr1_A 106 IEAICRSGAIDLVDYELAYGERIADVRRMTEEC-SVWLVVSRHYF-----------DG--TPRKETLLADMRQAERYGAD 171 (257)
T ss_dssp HHHHHHHTCCSEEEEEGGGTTHHHHHHHHHHHT-TCEEEEEEEES-----------SC--CCCHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHcCCCCEEEEECCCChhHHHHHHHHHhC-CCEEEEEecCC-----------CC--CcCHHHHHHHHHHHHhcCCC
Confidence 333333222777777665333555555544433 233322 2221 10 01135566666666677765
Q ss_pred EEeecC-CCChHHHHHH
Q 025860 218 LVGGCC-RTTPNTIKGI 233 (247)
Q Consensus 218 iIGGCC-Gt~P~hI~al 233 (247)
|+==.+ -.++++.-.|
T Consensus 172 ivKia~~a~s~~D~l~l 188 (257)
T 2yr1_A 172 IAKVAVMPKSPEDVLVL 188 (257)
T ss_dssp EEEEEECCSSHHHHHHH
T ss_pred EEEEEeccCCHHHHHHH
Confidence 543222 2344444443
No 158
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=81.07 E-value=8.4 Score=33.99 Aligned_cols=97 Identities=9% Similarity=0.022 Sum_probs=63.2
Q ss_pred HHHHhcCCCCEEEEec-CCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEEcCC-
Q 025860 79 VQVLVESAPDLIAFET-IPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGINCT- 156 (247)
Q Consensus 79 ~~~l~~~gvD~i~~ET-~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~NC~- 156 (247)
++...++|+|.+.+=+ .++.++++.+++.+++.+ +.+..++. +..+. +-+-+.+.++.+.+ .|++.|.+.=+
T Consensus 99 i~~a~~aGvd~v~I~~~~s~~~~~~~~i~~ak~~G--~~v~~~~~--~a~~~-~~e~~~~ia~~~~~-~Ga~~i~l~DT~ 172 (345)
T 1nvm_A 99 LKNAYQAGARVVRVATHCTEADVSKQHIEYARNLG--MDTVGFLM--MSHMI-PAEKLAEQGKLMES-YGATCIYMADSG 172 (345)
T ss_dssp HHHHHHHTCCEEEEEEETTCGGGGHHHHHHHHHHT--CEEEEEEE--STTSS-CHHHHHHHHHHHHH-HTCSEEEEECTT
T ss_pred HHHHHhCCcCEEEEEEeccHHHHHHHHHHHHHHCC--CEEEEEEE--eCCCC-CHHHHHHHHHHHHH-CCCCEEEECCCc
Confidence 4445567999876543 334467888888888874 56665553 22111 11233445555555 47888777643
Q ss_pred ---ChhHHHHHHHHHHhhc--CCCEEEEeC
Q 025860 157 ---PPRFISGLILIIKKVT--AKPILIYPN 181 (247)
Q Consensus 157 ---~p~~~~~~l~~l~~~~--~~pl~vyPN 181 (247)
.|..+..+++.+++.. +.||.+...
T Consensus 173 G~~~P~~v~~lv~~l~~~~~~~~pi~~H~H 202 (345)
T 1nvm_A 173 GAMSMNDIRDRMRAFKAVLKPETQVGMHAH 202 (345)
T ss_dssp CCCCHHHHHHHHHHHHHHSCTTSEEEEECB
T ss_pred CccCHHHHHHHHHHHHHhcCCCceEEEEEC
Confidence 3999999999999987 788887664
No 159
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=80.90 E-value=4.7 Score=33.72 Aligned_cols=140 Identities=16% Similarity=0.145 Sum_probs=65.4
Q ss_pred HHHHHhcCCCCEEEEecCCCHH--HHHHHHHHHHhhCC-CCcEEEEEEEc--CC---CcccC-----CCcHHHHHHHHHh
Q 025860 78 RVQVLVESAPDLIAFETIPNKI--EAQAYAELLEEENI-KIPAWFSFNSK--DG---VNVVS-----GDSLLECASIAES 144 (247)
Q Consensus 78 q~~~l~~~gvD~i~~ET~~~~~--E~~aa~~~~~~~~~-~~pv~is~~~~--~~---~~l~~-----G~~~~~~~~~~~~ 144 (247)
+++.+.+.|+|.+++=+..--. +...+.++++..+. ..++++++++. ++ -.+.. +.+..+.++.+..
T Consensus 88 ~i~~~~~~Gad~v~lg~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~d~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~ 167 (266)
T 2w6r_A 88 HFLEAFLAGADKALAASVFHFREIDMRELKEYLKKHGGSGQAVVVAIDAKRVDGEFMVFTHSGKKNTGILLRDWVVEVEK 167 (266)
T ss_dssp HHHHHHHHTCSEEECCCCC------CHHHHHHCC----CCCEEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHH
T ss_pred HHHHHHHcCCcHhhhhHHHHhCCCCHHHHHHHHHHcCCCCCEEEEEEEEEecCCCEEEEECCCceecchhHHHHHHHHHH
Confidence 4555556799999887654312 33333444444320 12566777763 21 11212 2467777777766
Q ss_pred CCCCeEEEEcCCChhH-----HHHHHHHHHhhcCCCEEEEeCCCCcccccccccccCCCCChHHHHHHHHHHHHcCCe--
Q 025860 145 CKRVVSVGINCTPPRF-----ISGLILIIKKVTAKPILIYPNSGEFYDADRKEWVQNTGVSDEDFVSYVSKWCEVGAS-- 217 (247)
Q Consensus 145 ~~~~~avG~NC~~p~~-----~~~~l~~l~~~~~~pl~vyPNaG~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~-- 217 (247)
.++..|.++-..... -..+++.+++..+.|+++ ++|. .++++..+ ..+.|+.
T Consensus 168 -~G~~~i~~t~~~~~g~~~g~~~~~i~~l~~~~~ipvia--~GGI--------------~~~ed~~~----~~~~Gadgv 226 (266)
T 2w6r_A 168 -RGAGEILLTSIDRDGTKSGYDTEMIRFVRPLTTLPIIA--SGGA--------------GKMEHFLE----AFLAGADAA 226 (266)
T ss_dssp -TTCSEEEEEETTTTTTCSCCCHHHHHHHGGGCCSCEEE--ESCC--------------CSHHHHHH----HHHHTCSEE
T ss_pred -cCCCEEEEEeecCCCCcCCCCHHHHHHHHHHcCCCEEE--eCCC--------------CCHHHHHH----HHHcCCHHH
Confidence 588888886532111 156778888777888654 4442 12444444 3334543
Q ss_pred EEeecCCCChHHHHHHHHHhh
Q 025860 218 LVGGCCRTTPNTIKGIYRTLS 238 (247)
Q Consensus 218 iIGGCCGt~P~hI~al~~~l~ 238 (247)
+||.--=..|..++.+.+.+.
T Consensus 227 ~vgsal~~~~~~~~~~~~~l~ 247 (266)
T 2w6r_A 227 LAASVFHFREIDMRELKEYLK 247 (266)
T ss_dssp EESTTTC--------------
T ss_pred HccHHHHcCCCCHHHHHHHHH
Confidence 455433345555666655553
No 160
>1j93_A UROD, uroporphyrinogen decarboxylase; beta barrel, plastidial enzyme, crystallographic dimer, lyase; 2.30A {Nicotiana tabacum} SCOP: c.1.22.1
Probab=80.82 E-value=28 Score=30.34 Aligned_cols=142 Identities=8% Similarity=0.042 Sum_probs=82.9
Q ss_pred HHHHHHHHHHHHHhcCCCCEE-EEecC---CCHHHHH--------HHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHH
Q 025860 70 TLKDFHRRRVQVLVESAPDLI-AFETI---PNKIEAQ--------AYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLE 137 (247)
Q Consensus 70 e~~~~~~~q~~~l~~~gvD~i-~~ET~---~~~~E~~--------aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~ 137 (247)
.+.+.+.+.++.++++|+|.| ++++. -+.++.+ .+++.+++.+.+.|++ -| |.+.. .
T Consensus 190 ~l~~~~~~~~~~~~~aGad~iqi~D~~~~~lsp~~f~ef~~p~~~~i~~~i~~~~~~~~~i-h~-c~g~~---------~ 258 (353)
T 1j93_A 190 KFATSMAKYIRYQADSGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDSVKLTHPNLPLI-LY-ASGSG---------G 258 (353)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEEECGGGGGSCHHHHHHHTHHHHHHHHHHHHHHSTTCCEE-EE-CSSCT---------T
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEeCcccccCCHHHHHHHhHHHHHHHHHHHHHhCCCCCEE-EE-CCChH---------H
Confidence 345566667777788999976 56765 3344433 2344555443246763 44 43222 1
Q ss_pred HHHHHHhCCCCeEEEEcCC-ChhHHHHHHHHHHhhcCCCEEEEeCCCCcccccccccccCCCCChHHHHHHHHHHHHc-C
Q 025860 138 CASIAESCKRVVSVGINCT-PPRFISGLILIIKKVTAKPILIYPNSGEFYDADRKEWVQNTGVSDEDFVSYVSKWCEV-G 215 (247)
Q Consensus 138 ~~~~~~~~~~~~avG~NC~-~p~~~~~~l~~l~~~~~~pl~vyPNaG~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-G 215 (247)
.+..+.+ .+++++++.-. +++.+.+ . ...-+.++-|--. .... .++++..+.+++.++. |
T Consensus 259 ~l~~l~~-~g~d~~~~d~~~d~~~~~~---~----~g~~~~l~Gnldp-------~~l~---~~~e~i~~~v~~~l~~~~ 320 (353)
T 1j93_A 259 LLERLPL-TGVDVVSLDWTVDMADGRR---R----LGPNVAIQGNVDP-------GVLF---GSKEFITNRINDTVKKAG 320 (353)
T ss_dssp TGGGGGG-GCCSEEECCTTSCHHHHHH---H----TCSSSEEECCBCG-------GGGG---SCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHh-cCCCEEEeCCCCCHHHHHH---H----cCCCeEEEecCCH-------HHHc---CCHHHHHHHHHHHHHHhC
Confidence 2334444 57899998865 4432222 1 2222455655421 1121 3588888888888764 4
Q ss_pred --CeEEeecCC----CChHHHHHHHHHhhCC
Q 025860 216 --ASLVGGCCR----TTPNTIKGIYRTLSNR 240 (247)
Q Consensus 216 --~~iIGGCCG----t~P~hI~al~~~l~~~ 240 (247)
--|++--|| |-|++++++.+.+++.
T Consensus 321 ~~g~I~~~g~gi~~~~~~enl~a~ve~v~~~ 351 (353)
T 1j93_A 321 KGKHILNLGHGIKVGTPEENFAHFFEIAKGL 351 (353)
T ss_dssp SSSEEBCBSSCCCTTCCHHHHHHHHHHHHTC
T ss_pred CCCEEEeCCCCCCCCCCHHHHHHHHHHHHHh
Confidence 367777777 6889999999888753
No 161
>2inf_A URO-D, UPD, uroporphyrinogen decarboxylase; (alpha-beta)8 barrel, eight parallel beta strands surrounded by eight alpha helices, lyase; 2.30A {Bacillus subtilis}
Probab=80.63 E-value=29 Score=30.40 Aligned_cols=138 Identities=13% Similarity=0.088 Sum_probs=79.6
Q ss_pred HHHHHHHHHHHHHhcCCCCEE-EEecCC---CHHHHH--------HHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHH
Q 025860 70 TLKDFHRRRVQVLVESAPDLI-AFETIP---NKIEAQ--------AYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLE 137 (247)
Q Consensus 70 e~~~~~~~q~~~l~~~gvD~i-~~ET~~---~~~E~~--------aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~ 137 (247)
.+.+.+.+.++.++++|+|.| ++++.. +.++.+ .+++.+++. +.|++ -|++ + . ..
T Consensus 190 ~i~~~~~~~~~~~~~aGad~i~i~D~~~~~lsp~~f~ef~~p~~~~i~~~i~~~--g~~~i-~~~~-G-------~--~~ 256 (359)
T 2inf_A 190 KLADMIIVYVKAQIKAGAKAIQIFDSWVGALNQADYRTYIKPVMNRIFSELAKE--NVPLI-MFGV-G-------A--SH 256 (359)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEEECTTGGGSCHHHHHHHTHHHHHHHHHHHGGG--CSCEE-EECT-T-------C--GG
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEeCCccccCCHHHHHHHhHHHHHHHHHHHHHc--CCcEE-EEcC-C-------c--HH
Confidence 355566667777788999977 466543 333322 233444443 46664 3432 2 1 12
Q ss_pred HHHHHHhCCCCeEEEEcCC-ChhHHHHHHHHHHhhcCCCEEEEeCCCCcccccccccccCCCCChHHHHHHHHHHHHcCC
Q 025860 138 CASIAESCKRVVSVGINCT-PPRFISGLILIIKKVTAKPILIYPNSGEFYDADRKEWVQNTGVSDEDFVSYVSKWCEVGA 216 (247)
Q Consensus 138 ~~~~~~~~~~~~avG~NC~-~p~~~~~~l~~l~~~~~~pl~vyPNaG~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 216 (247)
.+..+.+ .+++++++--. ++ ..+++. ..-+.++-|--. .... .++++..+.+++.++.|.
T Consensus 257 ~l~~l~~-~g~d~~~~d~~~d~-------~~~~~~-g~~~~l~Gnldp-------~~l~---~t~e~I~~~v~~~l~~~~ 317 (359)
T 2inf_A 257 LAGDWHD-LPLDVVGLDWRLGI-------DEARSK-GITKTVQGNLDP-------SILL---APWEVIEQKTKEILDQGM 317 (359)
T ss_dssp GHHHHHT-SSCSEEECCTTSCH-------HHHHHT-TCCSEEECCBCG-------GGGG---SCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHH-hCCCEEEeCCCCCH-------HHHHHc-CCCEEEEecCCh-------HHhc---CCHHHHHHHHHHHHHhCC
Confidence 4444555 58999988654 32 223332 223456655421 1121 358888888888876432
Q ss_pred ----eEEeecCC----CChHHHHHHHHHhhC
Q 025860 217 ----SLVGGCCR----TTPNTIKGIYRTLSN 239 (247)
Q Consensus 217 ----~iIGGCCG----t~P~hI~al~~~l~~ 239 (247)
-|++--|| |-|++|+++.+.+++
T Consensus 318 ~~~g~Il~~gcgi~~~~~~enl~a~ve~v~~ 348 (359)
T 2inf_A 318 ESDGFIFNLGHGVFPDVSPEVLKKLTAFVHE 348 (359)
T ss_dssp TSSCEEBCBSSCCCTTSCHHHHHHHHHHHHH
T ss_pred CCCCeEEeCCCCCCCCcCHHHHHHHHHHHHH
Confidence 46777777 567999999887753
No 162
>2xed_A Putative maleate isomerase; nicotinic acid catabolism, cofactor-independent CIS-trans isomerase; 1.95A {Nocardia farcinica} PDB: 2xec_A
Probab=80.58 E-value=18 Score=30.71 Aligned_cols=156 Identities=12% Similarity=0.074 Sum_probs=81.5
Q ss_pred CCHHHHHHH---HHHHHHHHhcCCCCEEEEecCCC-----HHHHHHHHHHHHhh----CCCCcEEEEEEEcCCCcccCCC
Q 025860 66 ITVETLKDF---HRRRVQVLVESAPDLIAFETIPN-----KIEAQAYAELLEEE----NIKIPAWFSFNSKDGVNVVSGD 133 (247)
Q Consensus 66 ~s~~e~~~~---~~~q~~~l~~~gvD~i~~ET~~~-----~~E~~aa~~~~~~~----~~~~pv~is~~~~~~~~l~~G~ 133 (247)
++++++.+. ..+-++.|.++|+|+|++=+.+. +...+...+.+++. .++.|++-
T Consensus 67 v~~~~l~~~~~~l~~aa~~L~~~g~d~IviaCnta~~~~G~~~~~~~~~~l~~~~~~~~~~iPv~~-------------- 132 (273)
T 2xed_A 67 VSPEGLAAMNAQRERCVLEIADAAPEVILYACLVAVMVGGPGEHHRVESAVAEQLATGGSQALVRS-------------- 132 (273)
T ss_dssp CSHHHHHHHHTTHHHHHHHHHTTCCSEEEECCHHHHHTTCTTHHHHHHHHHHHHHHHTTCCCEEEE--------------
T ss_pred CCHHHHHHHHHHHHHHHHHHhhcCCCEEEECCChHHHhcccchhHHHHHHHHHHhhccCCCCCEec--------------
Confidence 577776654 35567778889999999887553 11112223333332 22577761
Q ss_pred cHHHHHHHHHhCCCCeEEEEcCCChhHHHHHHHHHHhhcCCCEEEEeCCCCcccccccccccCCCCChHHHHHHHHHHHH
Q 025860 134 SLLECASIAESCKRVVSVGINCTPPRFISGLILIIKKVTAKPILIYPNSGEFYDADRKEWVQNTGVSDEDFVSYVSKWCE 213 (247)
Q Consensus 134 ~~~~~~~~~~~~~~~~avG~NC~~p~~~~~~l~~l~~~~~~pl~vyPNaG~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (247)
.....+..+.. .+..-||+=..-.......++..-...+..+ +.|.+...++.. ... ..+++.+.+.++++.+
T Consensus 133 ~~~A~~~al~~-~g~~rvgvltp~~~~~~~~~~~~l~~~Gi~v-~~~~~~~~~~~~-~~g----~~~~~~l~~~~~~l~~ 205 (273)
T 2xed_A 133 SAGALVEGLRA-LDAQRVALVTPYMRPLAEKVVAYLEAEGFTI-SDWRALEVADNT-EVG----CIPGEQVMAAARSLDL 205 (273)
T ss_dssp HHHHHHHHHHH-TTCCEEEEEECSCHHHHHHHHHHHHHTTCEE-EEEEECCCCBHH-HHH----TCCHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHH-cCCCeEEEEcCChhhhHHHHHHHHHHCCCEE-eccccCCCccch-hhc----ccCHHHHHHHHHHHhh
Confidence 12334444443 3555677766544444434433222234443 344333222211 000 1346778888887755
Q ss_pred cCCe--EEeecCCCCh-HHHHHHHHHhhCCCCCC
Q 025860 214 VGAS--LVGGCCRTTP-NTIKGIYRTLSNRSSVL 244 (247)
Q Consensus 214 ~G~~--iIGGCCGt~P-~hI~al~~~l~~~~~~~ 244 (247)
.|+. |+|-|-+-.. ..+..+.+.+. .|++
T Consensus 206 ~gadaIvLg~CT~l~~~~~~~~le~~lg--~PVi 237 (273)
T 2xed_A 206 SEVDALVISCAVQMPSLPLVETAEREFG--IPVL 237 (273)
T ss_dssp TTCSEEEEESSSSSCCTTHHHHHHHHHS--SCEE
T ss_pred CCCCEEEEcCCCCcchHHhHHHHHHHhC--CCEE
Confidence 5644 3443878766 46777766653 4443
No 163
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=80.16 E-value=4 Score=35.36 Aligned_cols=65 Identities=17% Similarity=0.212 Sum_probs=44.2
Q ss_pred HHHHHhcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEEcC
Q 025860 78 RVQVLVESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGINC 155 (247)
Q Consensus 78 q~~~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~NC 155 (247)
+++..+++|+|.|++.+++ ..+++.+++.++..+++.++.+| .|-+++.+.+.. + .+++.|++-.
T Consensus 206 ea~eal~aGaD~I~LDn~~-~~~~~~~v~~l~~~~~~v~ieaS----------GGIt~~~i~~~a-~-tGVD~isvG~ 270 (284)
T 1qpo_A 206 QLDAVLPEKPELILLDNFA-VWQTQTAVQRRDSRAPTVMLESS----------GGLSLQTAATYA-E-TGVDYLAVGA 270 (284)
T ss_dssp HHHHHGGGCCSEEEEETCC-HHHHHHHHHHHHHHCTTCEEEEE----------SSCCTTTHHHHH-H-TTCSEEECGG
T ss_pred HHHHHHHcCCCEEEECCCC-HHHHHHHHHHhhccCCCeEEEEE----------CCCCHHHHHHHH-h-cCCCEEEECH
Confidence 5555666899999999974 78899999888864323343332 355666666544 3 4789888654
No 164
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=80.12 E-value=26 Score=33.89 Aligned_cols=106 Identities=9% Similarity=-0.051 Sum_probs=67.2
Q ss_pred HHHHHHHHHHHHHHhcCCCCEEEEecCCC----------------H---HHHHHHHHHHHhhCCCCcEEEEEEEcCCCcc
Q 025860 69 ETLKDFHRRRVQVLVESAPDLIAFETIPN----------------K---IEAQAYAELLEEENIKIPAWFSFNSKDGVNV 129 (247)
Q Consensus 69 ~e~~~~~~~q~~~l~~~gvD~i~~ET~~~----------------~---~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l 129 (247)
..+.++|+++++ .|+.+|+.|...- - ...+.+.+++++. +.++++++.=. ++.
T Consensus 39 ~~~~~~y~~ra~----gG~Gliite~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vh~~--g~~i~~Ql~h~--Gr~ 110 (729)
T 1o94_A 39 GFQSAHRSVKAE----GGWAALNTEYCSINPESDDTHRLSARIWDEGDVRNLKAMTDEVHKY--GALAGVELWYG--GAH 110 (729)
T ss_dssp HHHHHHHHHHHH----TTCSEEEEEEEESSTTSCCTTSCCEECSSHHHHHHHHHHHHHHHTT--TCEEEEEEECC--GGG
T ss_pred HHHHHHHHHHhc----CCCCEEEEcceEecCcccCCCCCCCccCChHHhHHHHHHHHHHHhC--CCeEEEEecCC--Ccc
Confidence 478888887763 7899999985421 1 1234445556655 57888888531 110
Q ss_pred c-----------------CC------------------CcHHHHHHHHHhCCCCeEEEEcCCC---------h-------
Q 025860 130 V-----------------SG------------------DSLLECASIAESCKRVVSVGINCTP---------P------- 158 (247)
Q Consensus 130 ~-----------------~G------------------~~~~~~~~~~~~~~~~~avG~NC~~---------p------- 158 (247)
. .+ +.+.++++.+.+ .|.|+|=|||.+ |
T Consensus 111 ~~~~~~~~~~~~ps~~~~~~~~~~~p~~~t~~eI~~~i~~f~~aA~~a~~-aGfDgVEih~a~gyLl~qFlsp~~N~R~D 189 (729)
T 1o94_A 111 APNMESRATPRGPSQYASEFETLSYCKEMDLSDIAQVQQFYVDAAKRSRD-AGFDIVYVYGAHSYLPLQFLNPYYNKRTD 189 (729)
T ss_dssp SCCTTTCCCCEESSCCBCSSSTTCBCEECCHHHHHHHHHHHHHHHHHHHH-TTCSEEEEEECTTCHHHHHHCTTTCCCCS
T ss_pred ccccccCCCCcCCCcccccccCCCCCCcCCHHHHHHHHHHHHHHHHHHHH-cCCCEEEEccccchHHHHhcCCccCCCcC
Confidence 0 00 134455555555 589999999976 3
Q ss_pred ----------hHHHHHHHHHHhhc--CCCEEEEeCCC
Q 025860 159 ----------RFISGLILIIKKVT--AKPILIYPNSG 183 (247)
Q Consensus 159 ----------~~~~~~l~~l~~~~--~~pl~vyPNaG 183 (247)
..+.++++.+++.. +.||++.-+..
T Consensus 190 ~yGGs~enR~r~~~eiv~avr~~vg~~~pv~vrls~~ 226 (729)
T 1o94_A 190 KYGGSLENRARFWLETLEKVKHAVGSDCAIATRFGVD 226 (729)
T ss_dssp TTSSSHHHHTHHHHHHHHHHHHHHTTTSEEEEEEEEE
T ss_pred cCCCCHHHHhHHHHHHHHHHHHHhCCCceEEEEEccc
Confidence 23666777777776 78999887763
No 165
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=79.99 E-value=25 Score=29.28 Aligned_cols=45 Identities=11% Similarity=0.091 Sum_probs=31.1
Q ss_pred HHHHHHHHhcCCCCEEEEec-CC---------------------CHHHHHHHHHHHHhhCCCCcEEEE
Q 025860 75 HRRRVQVLVESAPDLIAFET-IP---------------------NKIEAQAYAELLEEENIKIPAWFS 120 (247)
Q Consensus 75 ~~~q~~~l~~~gvD~i~~ET-~~---------------------~~~E~~aa~~~~~~~~~~~pv~is 120 (247)
..+.++.+.++|+|+|-+-+ ++ ++.+....++.+++.. ++|+++.
T Consensus 34 ~~~~~~~l~~~Gad~ielg~p~~dp~~dg~~i~~a~~~al~~g~~~~~~~~~i~~ir~~~-~~Pv~~m 100 (262)
T 1rd5_A 34 TAEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLEMLREVTPEL-SCPVVLL 100 (262)
T ss_dssp HHHHHHHHHHTTCSSEEEECCCSCCTTSCHHHHHHHHHHHTTTCCHHHHHHHHHHHGGGC-SSCEEEE
T ss_pred HHHHHHHHHHcCCCEEEECCCCCCcccCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcC-CCCEEEE
Confidence 44578888899999998853 11 3455566677777663 7898763
No 166
>3i4e_A Isocitrate lyase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.69A {Burkholderia pseudomallei}
Probab=79.99 E-value=3 Score=38.40 Aligned_cols=33 Identities=30% Similarity=0.322 Sum_probs=29.5
Q ss_pred HHHHHhcCCCCEEEEec-CCCHHHHHHHHHHHHhh
Q 025860 78 RVQVLVESAPDLIAFET-IPNKIEAQAYAELLEEE 111 (247)
Q Consensus 78 q~~~l~~~gvD~i~~ET-~~~~~E~~aa~~~~~~~ 111 (247)
++.++.+ |+|+|++|+ .++++|++.+.+.++..
T Consensus 276 Ra~AY~~-GAD~if~E~~~~~~eei~~f~~~v~~~ 309 (439)
T 3i4e_A 276 RGLAYAP-YADLIWCETGKPDLEYAKKFAEAIHKQ 309 (439)
T ss_dssp HHHHHTT-TCSEEEECCSSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHh-hCCEEEecCCCCCHHHHHHHHHHhccc
Confidence 7888887 999999999 68999999999998863
No 167
>1u83_A Phosphosulfolactate synthase; structural genomics, phosphosulfolactate PSI, protein structure initiative, midwest center for struc genomics; 2.20A {Bacillus subtilis} SCOP: c.1.27.1
Probab=79.93 E-value=6.3 Score=34.05 Aligned_cols=134 Identities=16% Similarity=0.143 Sum_probs=84.1
Q ss_pred CCHHHHHHHHHHHHHHHhcCCCCEEEEe--cCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHH
Q 025860 66 ITVETLKDFHRRRVQVLVESAPDLIAFE--TIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAE 143 (247)
Q Consensus 66 ~s~~e~~~~~~~q~~~l~~~gvD~i~~E--T~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~ 143 (247)
++...++++ ++..- ..||++=|= |..-..+++.-++.+++. +++++.-=|+.+ ..+..| .+.+.++.++
T Consensus 50 lg~~~~~Dl----Le~ag-~yID~lKfg~GTs~l~~~l~ekI~l~~~~--gV~v~~GGTlfE-~~l~qg-~~~~yl~~~k 120 (276)
T 1u83_A 50 YPLQFFKDA----IAGAS-DYIDFVKFGWGTSLLTKDLEEKISTLKEH--DITFFFGGTLFE-KYVSQK-KVNEFHRYCT 120 (276)
T ss_dssp CCHHHHHHH----HHHHG-GGCCEEEECTTGGGGCTTHHHHHHHHHHT--TCEEEECHHHHH-HHHHTT-CHHHHHHHHH
T ss_pred CCHHHHHHH----HHHhh-hhcceEEecCcchhhhHHHHHHHHHHHHc--CCeEeCCcHHHH-HHHHcC-cHHHHHHHHH
Confidence 456666653 33333 468998666 333333588888899987 466553222111 112334 7788888888
Q ss_pred hCCCCeEEEEcCCC----hhHHHHHHHHHHhhcCCCEEEEeCCCCcccccccccccCCCCChHHHHHHHHHHHHcCCeEE
Q 025860 144 SCKRVVSVGINCTP----PRFISGLILIIKKVTAKPILIYPNSGEFYDADRKEWVQNTGVSDEDFVSYVSKWCEVGASLV 219 (247)
Q Consensus 144 ~~~~~~avG~NC~~----p~~~~~~l~~l~~~~~~pl~vyPNaG~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~iI 219 (247)
+ .|.++|=|+-.. .+.-..+++. ..+. +.|.+.-|..... .....+|+.|.+.+++++++||..|
T Consensus 121 ~-lGF~~IEISdGti~l~~~~~~~lI~~---a~~~-f~Vl~EvG~K~~~------~~~~~~~~~~I~~~~~dLeAGA~~V 189 (276)
T 1u83_A 121 Y-FGCEYIEISNGTLPMTNKEKAAYIAD---FSDE-FLVLSEVGSKDAE------LASRQSSEEWLEYIVEDMEAGAEKV 189 (276)
T ss_dssp H-TTCSEEEECCSSSCCCHHHHHHHHHH---HTTT-SEEEEECSCCC------------CCSTHHHHHHHHHHHHTEEEE
T ss_pred H-cCCCEEEECCCcccCCHHHHHHHHHH---HHhh-cEEeeeccccCcc------ccCCCCHHHHHHHHHHHHHCCCcEE
Confidence 7 699999999852 3444445553 4445 8889988863211 1122578999999999999998775
No 168
>2oho_A Glutamate racemase; isomerase; 2.25A {Streptococcus pyogenes m1 gas} PDB: 2ohg_A 2ohv_A*
Probab=79.81 E-value=16 Score=31.00 Aligned_cols=54 Identities=19% Similarity=0.286 Sum_probs=38.8
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHhcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEE
Q 025860 60 GNYGDAITVETLKDFHRRRVQVLVESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAW 118 (247)
Q Consensus 60 g~y~~~~s~~e~~~~~~~q~~~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~ 118 (247)
.+|+. .+.+++.++..+.++.|.+.|+|+|++=+.+.- ..+++.+++.. ++||+
T Consensus 49 ~Pyg~-~s~~~i~~~~~~~~~~L~~~g~d~iviaCNTas---~~~l~~lr~~~-~iPvi 102 (273)
T 2oho_A 49 APYGP-RPKKQIKEYTWELVNFLLTQNVKMIVFACNTAT---AVAWEEVKAAL-DIPVL 102 (273)
T ss_dssp CCCTT-SCHHHHHHHHHHHHHHHHTTTCSEEEECCHHHH---HHHHHHHHHHC-SSCEE
T ss_pred CCCCC-CCHHHHHHHHHHHHHHHHHCCCCEEEEeCchHh---HHHHHHHHHhC-CCCEE
Confidence 35554 578999999999999999999999998544321 12356666654 68877
No 169
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=79.77 E-value=12 Score=31.44 Aligned_cols=118 Identities=11% Similarity=0.114 Sum_probs=67.5
Q ss_pred CCHHHHHHHHHHHHHHHhcCCCCEEEEecCCCHH----HH-HHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHH--
Q 025860 66 ITVETLKDFHRRRVQVLVESAPDLIAFETIPNKI----EA-QAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLEC-- 138 (247)
Q Consensus 66 ~s~~e~~~~~~~q~~~l~~~gvD~i~~ET~~~~~----E~-~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~-- 138 (247)
++.+++.+.|++ + ..+.|++++|+-+.+. +- ....+.++.. +.||++-..... | ++..+
T Consensus 111 ~~~~~i~~~~~~----l-~~~~D~vlIEGagGl~~pl~~~~~~~adla~~l--~~pVILV~~~~~------g-~i~~~~l 176 (251)
T 3fgn_A 111 PARDQIVRLIAD----L-DRPGRLTLVEGAGGLLVELAEPGVTLRDVAVDV--AAAALVVVTADL------G-TLNHTKL 176 (251)
T ss_dssp CCHHHHHHHHHT----T-CCTTCEEEEECSSSTTCEEETTTEEHHHHHHHT--TCEEEEEECSST------T-HHHHHHH
T ss_pred CCHHHHHHHHHH----H-HhcCCEEEEECCCCCcCCcCcccchHHHHHHHc--CCCEEEEEcCCC------c-cHHHHHH
Confidence 345555554442 2 3578999999976542 21 2445566766 589886664432 1 23333
Q ss_pred -HHHHHh-CCCCeEEEEcCC--ChhH-HHHHHHHHHhhcCCC-EEEEeCCCCcccccccccccCCCCChHHHHHHHHHHH
Q 025860 139 -ASIAES-CKRVVSVGINCT--PPRF-ISGLILIIKKVTAKP-ILIYPNSGEFYDADRKEWVQNTGVSDEDFVSYVSKWC 212 (247)
Q Consensus 139 -~~~~~~-~~~~~avG~NC~--~p~~-~~~~l~~l~~~~~~p-l~vyPNaG~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (247)
++.+.. ...+.+|-+|.. +|.. -...++.+++. .| |++-|.... ..++++|.+.+..|.
T Consensus 177 t~~~l~~~g~~i~GvIlN~v~~~~~~~~~~~~~~le~~--vpvLG~iP~~~~-------------~l~~~~~~~~~~~~~ 241 (251)
T 3fgn_A 177 TLEALAAQQVSCAGLVIGSWPDPPGLVAASNRSALARI--AMVRAALPAGAA-------------SLDAGDFAAMSAAAF 241 (251)
T ss_dssp HHHHHHHTTCCEEEEEEEEECSSCCHHHHHHHHHHHHH--SCEEEEEETTGG-------------GCCHHHHHHHHHHHS
T ss_pred HHHHHHhCCCCEEEEEEECCCCchhhhhhhHHHHHHHh--CCEEEEeeCCCC-------------cCCHHHHHHHHhccc
Confidence 333322 235667889996 2322 23345556655 77 456674311 145888999998886
No 170
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=79.75 E-value=2.7 Score=36.50 Aligned_cols=61 Identities=13% Similarity=0.130 Sum_probs=41.9
Q ss_pred HhcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEEcC
Q 025860 82 LVESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGINC 155 (247)
Q Consensus 82 l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~NC 155 (247)
.+++|+|+|.+.++ ++.+++.+++.++..+++.|+.+|= |.+++.+.+ +.+ .|+|.|.+-.
T Consensus 209 A~~aGaD~I~LDn~-~~e~l~~av~~l~~~~~~v~ieASG----------GIt~eni~~-~a~-tGVD~IsvGs 269 (285)
T 1o4u_A 209 AVEAGADIVMLDNL-SPEEVKDISRRIKDINPNVIVEVSG----------GITEENVSL-YDF-ETVDVISSSR 269 (285)
T ss_dssp HHHTTCSEEEEESC-CHHHHHHHHHHHHHHCTTSEEEEEE----------CCCTTTGGG-GCC-TTCCEEEEGG
T ss_pred HHHcCCCEEEECCC-CHHHHHHHHHHhhccCCCceEEEEC----------CCCHHHHHH-HHH-cCCCEEEEeH
Confidence 45589999999996 4889999998887643345665553 445554444 333 5788887755
No 171
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=79.74 E-value=15 Score=32.65 Aligned_cols=150 Identities=11% Similarity=0.057 Sum_probs=88.2
Q ss_pred CCHHH---HHHHHHHHHHHHhcCCCCEEEEecC---------------------CCHH-HHH---HHHHHHHhh-CCCCc
Q 025860 66 ITVET---LKDFHRRRVQVLVESAPDLIAFETI---------------------PNKI-EAQ---AYAELLEEE-NIKIP 116 (247)
Q Consensus 66 ~s~~e---~~~~~~~q~~~l~~~gvD~i~~ET~---------------------~~~~-E~~---aa~~~~~~~-~~~~p 116 (247)
+|.+| +.+.|.+.++...++|.|.|=+=-- .+++ .++ .+++++++. +.+.|
T Consensus 148 mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~d~p 227 (363)
T 3l5l_A 148 MTLDDIARVKQDFVDAARRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREVWPENLP 227 (363)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTTSCTTSC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHHHHcCCCce
Confidence 55555 5567888888888899999854421 1121 233 345555553 44679
Q ss_pred EEEEEEEcCCCcccCC-CcHHH---HHHHHHhCCCCeEEEEcCC----------ChhHHHHHHHHHHhhcCCCEEEEeCC
Q 025860 117 AWFSFNSKDGVNVVSG-DSLLE---CASIAESCKRVVSVGINCT----------PPRFISGLILIIKKVTAKPILIYPNS 182 (247)
Q Consensus 117 v~is~~~~~~~~l~~G-~~~~~---~~~~~~~~~~~~avG~NC~----------~p~~~~~~l~~l~~~~~~pl~vyPNa 182 (247)
+.+-++..+- ...| .++++ +++.+.+ .+++.|-+-.. ++..-..+++.+++..+.|+++ |.
T Consensus 228 V~vRis~~~~--~~~G~~~~~~~~~la~~L~~-~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~--~G 302 (363)
T 3l5l_A 228 LTARFGVLEY--DGRDEQTLEESIELARRFKA-GGLDLLSVSVGFTIPDTNIPWGPAFMGPIAERVRREAKLPVTS--AW 302 (363)
T ss_dssp EEEEEEEECS--SSCHHHHHHHHHHHHHHHHH-TTCCEEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHTCCEEE--CS
T ss_pred EEEEecchhc--CCCCCCCHHHHHHHHHHHHH-cCCCEEEEecCccccccccCCCcchhHHHHHHHHHHcCCcEEE--eC
Confidence 9998886432 1234 44454 4555555 57888776542 1333456778888878888653 44
Q ss_pred CCcccccccccccCCCCChHHHHHHHHHHHHcC-CeEEeecCC--CChHHHHHHHHHhh
Q 025860 183 GEFYDADRKEWVQNTGVSDEDFVSYVSKWCEVG-ASLVGGCCR--TTPNTIKGIYRTLS 238 (247)
Q Consensus 183 G~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G-~~iIGGCCG--t~P~hI~al~~~l~ 238 (247)
|. .++ +.+.+.++.| +.+|+=+=+ ..|+-.+.+++.+.
T Consensus 303 gI--------------~s~----e~a~~~l~~G~aD~V~iGR~~lanPdl~~k~~~~lg 343 (363)
T 3l5l_A 303 GF--------------GTP----QLAEAALQANQLDLVSVGRAHLADPHWAYFAAKELG 343 (363)
T ss_dssp ST--------------TSH----HHHHHHHHTTSCSEEECCHHHHHCTTHHHHHHHHTT
T ss_pred CC--------------CCH----HHHHHHHHCCCccEEEecHHHHhCchHHHHHHHHcC
Confidence 32 123 2334566666 777763322 36777777776664
No 172
>1r3s_A URO-D, uroporphyrinogen decarboxylase, UPD; uroporphyrinogen decarboxylase coproporphyrinogen, X-RAY crystallography, lyase; HET: 1CP; 1.65A {Homo sapiens} SCOP: c.1.22.1 PDB: 1r3t_A* 1r3r_A 1r3q_A* 1r3y_A* 1uro_A 3gvq_A 3gvr_A 1r3v_A* 3gvv_A 3gvw_A 1jph_A 1r3w_A* 3gw3_A 1jpi_A 1jpk_A 3gw0_A 2q71_A* 2q6z_A*
Probab=79.69 E-value=31 Score=30.28 Aligned_cols=140 Identities=14% Similarity=0.129 Sum_probs=80.2
Q ss_pred HHHHHHHHHHHHhcCCCCEE-EEecCC---CHHHHH--------HHHHHHH-hh---CC-CCcEEEEEEEcCCCcccCCC
Q 025860 71 LKDFHRRRVQVLVESAPDLI-AFETIP---NKIEAQ--------AYAELLE-EE---NI-KIPAWFSFNSKDGVNVVSGD 133 (247)
Q Consensus 71 ~~~~~~~q~~~l~~~gvD~i-~~ET~~---~~~E~~--------aa~~~~~-~~---~~-~~pv~is~~~~~~~~l~~G~ 133 (247)
+.+...+.++..+++|+|.| ++++.. +.+..+ .+++.++ +. +. +.|++. |++. .
T Consensus 195 l~~~~~~~~~~~i~aGad~i~i~D~~~~~lsp~~f~ef~~p~~k~i~~~i~~~~~~~g~~~~p~i~-~~~G--------~ 265 (367)
T 1r3s_A 195 LTDALVPYLVGQVVAGAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLREAGLAPVPMII-FAKD--------G 265 (367)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEEETTGGGSCHHHHHHHTHHHHHHHHHHHHHHHHHTTCCCCCEEE-EETT--------C
T ss_pred HHHHHHHHHHHHHHhCCCEEEEecCccccCCHHHHHHHhHHHHHHHHHHHhhhhccccCCCCCeEE-EcCC--------c
Confidence 34445555666677999988 567633 333322 3445555 43 10 366653 4432 1
Q ss_pred cHHHHHHHHHhCCCCeEEEEcCC-ChhHHHHHHHHHHhhcCCCEEEEeCCCCcccccccccccCCCCChHHHHHHHHHHH
Q 025860 134 SLLECASIAESCKRVVSVGINCT-PPRFISGLILIIKKVTAKPILIYPNSGEFYDADRKEWVQNTGVSDEDFVSYVSKWC 212 (247)
Q Consensus 134 ~~~~~~~~~~~~~~~~avG~NC~-~p~~~~~~l~~l~~~~~~pl~vyPNaG~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (247)
...+..+.+ .++++|++--. ++..+. +.+ ..-+.++-|--. ..+. -++++..+.+++.+
T Consensus 266 --~~~l~~l~~-~g~d~i~~d~~~dl~~a~---~~~----g~~~~l~Gnldp-------~~L~---gt~e~i~~~v~~~l 325 (367)
T 1r3s_A 266 --HFALEELAQ-AGYEVVGLDWTVAPKKAR---ECV----GKTVTLQGNLDP-------CALY---ASEEEIGQLVKQML 325 (367)
T ss_dssp --GGGHHHHTT-SSCSEEECCTTSCHHHHH---HHH----CSSSEEEEEECG-------GGGG---SCHHHHHHHHHHHH
T ss_pred --HHHHHHHHh-cCCCEEEeCCCCCHHHHH---HHc----CCCeEEEeCCCh-------HHhc---CCHHHHHHHHHHHH
Confidence 123445655 58999988643 443322 222 222445555421 1121 25788888888887
Q ss_pred Hc-C--CeEEeecCC----CChHHHHHHHHHhhC
Q 025860 213 EV-G--ASLVGGCCR----TTPNTIKGIYRTLSN 239 (247)
Q Consensus 213 ~~-G--~~iIGGCCG----t~P~hI~al~~~l~~ 239 (247)
+. | --|++--|| |.|++++++.+++++
T Consensus 326 ~~~g~~g~I~~~ghgi~~~~p~env~a~v~~v~~ 359 (367)
T 1r3s_A 326 DDFGPHRYIANLGHGLYPDMDPEHVGAFVDAVHK 359 (367)
T ss_dssp HHHCSSSEEEEESSCCCTTCCHHHHHHHHHHHHH
T ss_pred HHhCCCCeeecCCCCCCCCCCHHHHHHHHHHHHH
Confidence 64 4 678887787 567999999888764
No 173
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=79.66 E-value=15 Score=31.97 Aligned_cols=83 Identities=16% Similarity=0.073 Sum_probs=49.2
Q ss_pred HHHHHHHhcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEEcC
Q 025860 76 RRRVQVLVESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGINC 155 (247)
Q Consensus 76 ~~q~~~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~NC 155 (247)
.++++.+.+.|+|++.+ ...+.. ..++.+++. +.|++.++ .+++++.. +.+ .++++|.+..
T Consensus 92 ~~~~~~~~~~g~d~V~l-~~g~p~---~~~~~l~~~--g~~v~~~v-----------~s~~~a~~-a~~-~GaD~i~v~g 152 (326)
T 3bo9_A 92 DDLVKVCIEEKVPVVTF-GAGNPT---KYIRELKEN--GTKVIPVV-----------ASDSLARM-VER-AGADAVIAEG 152 (326)
T ss_dssp HHHHHHHHHTTCSEEEE-ESSCCH---HHHHHHHHT--TCEEEEEE-----------SSHHHHHH-HHH-TTCSCEEEEC
T ss_pred HHHHHHHHHCCCCEEEE-CCCCcH---HHHHHHHHc--CCcEEEEc-----------CCHHHHHH-HHH-cCCCEEEEEC
Confidence 44667777788998887 333333 334556654 57888655 24455544 444 4788888843
Q ss_pred ---C---ChhHHHHHHHHHHhhcCCCEE
Q 025860 156 ---T---PPRFISGLILIIKKVTAKPIL 177 (247)
Q Consensus 156 ---~---~p~~~~~~l~~l~~~~~~pl~ 177 (247)
. +......+++.+.+..+.|++
T Consensus 153 ~~~GG~~G~~~~~~ll~~i~~~~~iPvi 180 (326)
T 3bo9_A 153 MESGGHIGEVTTFVLVNKVSRSVNIPVI 180 (326)
T ss_dssp TTSSEECCSSCHHHHHHHHHHHCSSCEE
T ss_pred CCCCccCCCccHHHHHHHHHHHcCCCEE
Confidence 1 111234677777766678853
No 174
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=79.57 E-value=7.8 Score=36.71 Aligned_cols=47 Identities=15% Similarity=0.289 Sum_probs=34.8
Q ss_pred HHHHHHHHhcCCCCEEEEecC-CCHHHHHHHHHHHHhhCCCCcEEEEE
Q 025860 75 HRRRVQVLVESAPDLIAFETI-PNKIEAQAYAELLEEENIKIPAWFSF 121 (247)
Q Consensus 75 ~~~q~~~l~~~gvD~i~~ET~-~~~~E~~aa~~~~~~~~~~~pv~is~ 121 (247)
..++++.|+++|||+|++.|- .+-.-....++.+++..+++++++.=
T Consensus 282 ~~eR~~aLv~AGvD~iviD~ahGhs~~v~~~i~~ik~~~p~~~viaGN 329 (556)
T 4af0_A 282 DKDRLKLLAEAGLDVVVLDSSQGNSVYQIEFIKWIKQTYPKIDVIAGN 329 (556)
T ss_dssp HHHHHHHHHHTTCCEEEECCSCCCSHHHHHHHHHHHHHCTTSEEEEEE
T ss_pred HHHHHHHHHhcCCcEEEEeccccccHHHHHHHHHHHhhCCcceEEecc
Confidence 456899999999999999964 34445556667777766678887644
No 175
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=79.51 E-value=30 Score=29.93 Aligned_cols=148 Identities=7% Similarity=-0.028 Sum_probs=81.7
Q ss_pred HHHHHHHHHHHHHhcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCc-------ccC-CCcHHHHHHH
Q 025860 70 TLKDFHRRRVQVLVESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVN-------VVS-GDSLLECASI 141 (247)
Q Consensus 70 e~~~~~~~q~~~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~-------l~~-G~~~~~~~~~ 141 (247)
.+.+ ++..+..+++.|+|.|++=.-- . +.++...+....+.|+|+.+.-....+ +.+ +.+++++++
T Consensus 46 ~l~~-~k~lv~~~~~~~~~avl~~~g~-~---~~a~~~~~~~~~~~glil~l~~~~~l~~~~~~~~l~~~~~~ve~a~~- 119 (304)
T 1to3_A 46 VLTD-FKVNAAKILSPYASAVLLDQQF-C---YRQAVEQNAVAKSCAMIVAADDFIPGNGIPVDNVVLDKKINAQAVKR- 119 (304)
T ss_dssp HHHH-HHHHHHHHHGGGCSEEEECTTT-T---HHHHHHTTCSCTTSEEEEECEEEEEETTEEEEEEEECSSCCHHHHHH-
T ss_pred hhhh-HHHHHHHHHhcCCCEEEeCHHH-H---HHHhhcccccCCCCcEEEEECCCCCCCCCccchhhccCchhHHHHHH-
Confidence 4444 5557777888999999964332 1 111111122333689998876422111 222 566666655
Q ss_pred HHhCCCCeEEEEcCC-C----hhHHHHHHHHHHhh---cCCCEEEE--eCCCCcccccccccccCCCCCh-HHHHHHHHH
Q 025860 142 AESCKRVVSVGINCT-P----PRFISGLILIIKKV---TAKPILIY--PNSGEFYDADRKEWVQNTGVSD-EDFVSYVSK 210 (247)
Q Consensus 142 ~~~~~~~~avG~NC~-~----p~~~~~~l~~l~~~---~~~pl~vy--PNaG~~~d~~~~~~~~~~~~~~-~~~~~~~~~ 210 (247)
.|+++|.+-+. + ...+...+.++.+. .+.|+++- |....+- + ..+| +...+.++.
T Consensus 120 ----~GAdaV~vlv~~~~d~~~~~~~~~i~~v~~~~~~~G~p~lv~~~~~g~~v~---------~-~~~~~~~v~~aa~~ 185 (304)
T 1to3_A 120 ----DGAKALKLLVLWRSDEDAQQRLNMVKEFNELCHSNGLLSIIEPVVRPPRCG---------D-KFDREQAIIDAAKE 185 (304)
T ss_dssp ----TTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHTTTCEEEEEEEECCCSSC---------S-CCCHHHHHHHHHHH
T ss_pred ----cCCCEEEEEEEcCCCccHHHHHHHHHHHHHHHHHcCCcEEEEEECCCCccc---------c-CCChhHHHHHHHHH
Confidence 47888885552 2 22344444443332 47886544 3222111 1 1134 667777888
Q ss_pred HHHcCCeEEeecCC----CChHHHHHHHHHh
Q 025860 211 WCEVGASLVGGCCR----TTPNTIKGIYRTL 237 (247)
Q Consensus 211 ~~~~G~~iIGGCCG----t~P~hI~al~~~l 237 (247)
..+.|+.||+==-. .+++.++.+.+..
T Consensus 186 a~~lGaD~iKv~~~~~~~g~~~~~~~vv~~~ 216 (304)
T 1to3_A 186 LGDSGADLYKVEMPLYGKGARSDLLTASQRL 216 (304)
T ss_dssp HTTSSCSEEEECCGGGGCSCHHHHHHHHHHH
T ss_pred HHHcCCCEEEeCCCcCCCCCHHHHHHHHHhc
Confidence 88999999863221 2677777766553
No 176
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=79.41 E-value=5.1 Score=32.86 Aligned_cols=110 Identities=14% Similarity=0.087 Sum_probs=60.1
Q ss_pred HHHHHHhcCCCCEEEEecCCC--H--HHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEE
Q 025860 77 RRVQVLVESAPDLIAFETIPN--K--IEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVG 152 (247)
Q Consensus 77 ~q~~~l~~~gvD~i~~ET~~~--~--~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG 152 (247)
++++.+.++|+|++.+-+... . ..+...++.+++...+.+++++. .++.++.... . .+++.||
T Consensus 92 ~~i~~~~~~Gad~V~l~~~~~~~~~~~~~~~~i~~i~~~~~~~~v~~~~-----------~t~~ea~~a~-~-~Gad~i~ 158 (234)
T 1yxy_A 92 TEVDQLAALNIAVIAMDCTKRDRHDGLDIASFIRQVKEKYPNQLLMADI-----------STFDEGLVAH-Q-AGIDFVG 158 (234)
T ss_dssp HHHHHHHTTTCSEEEEECCSSCCTTCCCHHHHHHHHHHHCTTCEEEEEC-----------SSHHHHHHHH-H-TTCSEEE
T ss_pred HHHHHHHHcCCCEEEEcccccCCCCCccHHHHHHHHHHhCCCCeEEEeC-----------CCHHHHHHHH-H-cCCCEEe
Confidence 366678889999998865421 1 13345566666653356666543 1345554433 4 4789883
Q ss_pred -----EcCCC---hhHHHHHHHHHHhhcCCCEEEEeCCCCcccccccccccCCCCChHHHHHHHHHHHHcCCeEEe
Q 025860 153 -----INCTP---PRFISGLILIIKKVTAKPILIYPNSGEFYDADRKEWVQNTGVSDEDFVSYVSKWCEVGASLVG 220 (247)
Q Consensus 153 -----~NC~~---p~~~~~~l~~l~~~~~~pl~vyPNaG~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~iIG 220 (247)
+|-.. ...-..+++.+.+. +.|++ .++|. .+++ .+.++++.|+..+.
T Consensus 159 ~~v~g~~~~~~~~~~~~~~~i~~~~~~-~ipvi--a~GGI--------------~s~~----~~~~~~~~Gad~v~ 213 (234)
T 1yxy_A 159 TTLSGYTPYSRQEAGPDVALIEALCKA-GIAVI--AEGKI--------------HSPE----EAKKINDLGVAGIV 213 (234)
T ss_dssp CTTTTSSTTSCCSSSCCHHHHHHHHHT-TCCEE--EESCC--------------CSHH----HHHHHHTTCCSEEE
T ss_pred eeccccCCCCcCCCCCCHHHHHHHHhC-CCCEE--EECCC--------------CCHH----HHHHHHHCCCCEEE
Confidence 33211 00113556666665 67743 44442 1243 34457777876653
No 177
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=79.29 E-value=33 Score=30.34 Aligned_cols=97 Identities=9% Similarity=0.067 Sum_probs=58.4
Q ss_pred HHHHHHHHHhCCCCeEEEEcCCC---------h-----------------hHHHHHHHHHHhhcC-CCEEEEeCCCCccc
Q 025860 135 LLECASIAESCKRVVSVGINCTP---------P-----------------RFISGLILIIKKVTA-KPILIYPNSGEFYD 187 (247)
Q Consensus 135 ~~~~~~~~~~~~~~~avG~NC~~---------p-----------------~~~~~~l~~l~~~~~-~pl~vyPNaG~~~d 187 (247)
+.++++.+.+ .++|+|=|||.+ | ..+.++++.+++... .||++.-+.+..++
T Consensus 163 f~~aA~~a~~-aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~~v~vrls~~~~~~ 241 (364)
T 1vyr_A 163 FRQAVANARE-AGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWSADRIGIRVSPIGTFQ 241 (364)
T ss_dssp HHHHHHHHHH-TTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHSCGGGEEEEECCSSCBT
T ss_pred HHHHHHHHHH-cCCCEEEEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHHHhcCCCcEEEEEccccccc
Confidence 3455555555 589999999964 2 235666777777753 39999877764222
Q ss_pred ccccccccCCCCChHHHHHHHHHHHHcCCeEEeecCCC-------ChHHHHHHHHHh
Q 025860 188 ADRKEWVQNTGVSDEDFVSYVSKWCEVGASLVGGCCRT-------TPNTIKGIYRTL 237 (247)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~iIGGCCGt-------~P~hI~al~~~l 237 (247)
+.. ....+.+++.+.++.+.+.|+.+|-=-+++ ..+.++.+++.+
T Consensus 242 ~~~-----~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~~~~~~~~v~~~~ 293 (364)
T 1vyr_A 242 NVD-----NGPNEEADALYLIEELAKRGIAYLHMSETDLAGGKPYSEAFRQKVRERF 293 (364)
T ss_dssp TBC-----CCTTHHHHHHHHHHHHHHTTCSEEEEECCBTTBCCCCCHHHHHHHHHHC
T ss_pred ccc-----CCCCCHHHHHHHHHHHHHhCCCEEEEecCcccCCCcccHHHHHHHHHHC
Confidence 100 001235667778888888888776533321 234566666654
No 178
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=79.22 E-value=8.6 Score=32.88 Aligned_cols=90 Identities=11% Similarity=0.113 Sum_probs=54.7
Q ss_pred HHHHHhcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeE-EEEcCC
Q 025860 78 RVQVLVESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVS-VGINCT 156 (247)
Q Consensus 78 q~~~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~a-vG~NC~ 156 (247)
-++.+.++|||.+++=.+| ++|....++.+++.+ +..+..+ ...++.+.+........+... +.++++
T Consensus 115 f~~~~~~aGvdgvii~Dlp-~ee~~~~~~~~~~~g--l~~i~li--------aP~t~~eri~~i~~~~~gfvY~vS~~Gv 183 (267)
T 3vnd_A 115 FYTKAQAAGVDSVLIADVP-VEESAPFSKAAKAHG--IAPIFIA--------PPNADADTLKMVSEQGEGYTYLLSRAGV 183 (267)
T ss_dssp HHHHHHHHTCCEEEETTSC-GGGCHHHHHHHHHTT--CEEECEE--------CTTCCHHHHHHHHHHCCSCEEESCCCCC
T ss_pred HHHHHHHcCCCEEEeCCCC-HhhHHHHHHHHHHcC--CeEEEEE--------CCCCCHHHHHHHHHhCCCcEEEEecCCC
Confidence 4555667899999987777 467888888888874 4433222 123344444333333333332 345663
Q ss_pred -C-----hhHHHHHHHHHHhhcCCCEEE
Q 025860 157 -P-----PRFISGLILIIKKVTAKPILI 178 (247)
Q Consensus 157 -~-----p~~~~~~l~~l~~~~~~pl~v 178 (247)
+ +..+..+++++++..+.|+.+
T Consensus 184 TG~~~~~~~~~~~~v~~vr~~~~~pv~v 211 (267)
T 3vnd_A 184 TGTESKAGEPIENILTQLAEFNAPPPLL 211 (267)
T ss_dssp C--------CHHHHHHHHHTTTCCCEEE
T ss_pred CCCccCCcHHHHHHHHHHHHhcCCCEEE
Confidence 3 345678889998888889876
No 179
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=79.01 E-value=32 Score=29.89 Aligned_cols=98 Identities=6% Similarity=-0.066 Sum_probs=63.6
Q ss_pred HHHHHhcCCCCEEEEecCC--------------CHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHH
Q 025860 78 RVQVLVESAPDLIAFETIP--------------NKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAE 143 (247)
Q Consensus 78 q~~~l~~~gvD~i~~ET~~--------------~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~ 143 (247)
-++.|.++|++.+-+|-.. +.+|+..=++++++.-.+.+++|.--.+. .. ...++++++.+.
T Consensus 103 ~v~~l~~aGaagv~iEDq~~~k~cGh~~gk~l~~~~e~~~ri~Aa~~A~~~~~~~I~ARTDa--~~--~~gldeai~Ra~ 178 (298)
T 3eoo_A 103 TIRSFIKAGVGAVHLEDQVGQKRCGHRPGKECVPAGEMVDRIKAAVDARTDETFVIMARTDA--AA--AEGIDAAIERAI 178 (298)
T ss_dssp HHHHHHHTTCSEEEEECBCCCCCTTCCCCCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECT--HH--HHHHHHHHHHHH
T ss_pred HHHHHHHhCCeEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHhccCCCeEEEEeehh--hh--hcCHHHHHHHHH
Confidence 4677778999999999753 45666655655555422356665554432 21 234777877764
Q ss_pred h--CCCCeEEEEcCC-ChhHHHHHHHHHHhhcCCCEEEEeCCC
Q 025860 144 S--CKRVVSVGINCT-PPRFISGLILIIKKVTAKPILIYPNSG 183 (247)
Q Consensus 144 ~--~~~~~avG~NC~-~p~~~~~~l~~l~~~~~~pl~vyPNaG 183 (247)
. ..|+|+|=+-|. +++.+..+.+.+ +.|+++-+-.+
T Consensus 179 ay~~AGAD~if~~~~~~~ee~~~~~~~~----~~Pl~~n~~~~ 217 (298)
T 3eoo_A 179 AYVEAGADMIFPEAMKTLDDYRRFKEAV----KVPILANLTEF 217 (298)
T ss_dssp HHHHTTCSEEEECCCCSHHHHHHHHHHH----CSCBEEECCTT
T ss_pred hhHhcCCCEEEeCCCCCHHHHHHHHHHc----CCCeEEEeccC
Confidence 2 258999999997 577766666654 58987765443
No 180
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=78.93 E-value=34 Score=31.82 Aligned_cols=66 Identities=11% Similarity=0.040 Sum_probs=43.1
Q ss_pred HHHHHHHhcCCCCEEEEecC-CCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEE
Q 025860 76 RRRVQVLVESAPDLIAFETI-PNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGI 153 (247)
Q Consensus 76 ~~q~~~l~~~gvD~i~~ET~-~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~ 153 (247)
.++++.|+++|+|+|.+-+- ++...+...++.+++..+++|+++.-. .+.+.+.. +.+ .|+++|-+
T Consensus 258 ~era~aLveaGvd~I~Id~a~g~~~~v~~~i~~i~~~~~~~~vi~g~v----------~t~e~a~~-~~~-aGad~i~v 324 (511)
T 3usb_A 258 MTRIDALVKASVDAIVLDTAHGHSQGVIDKVKEVRAKYPSLNIIAGNV----------ATAEATKA-LIE-AGANVVKV 324 (511)
T ss_dssp HHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTSEEEEEEE----------CSHHHHHH-HHH-HTCSEEEE
T ss_pred HHHHHHHHhhccceEEecccccchhhhhhHHHHHHHhCCCceEEeeee----------ccHHHHHH-HHH-hCCCEEEE
Confidence 44788899999999998654 345556667777776544678886321 14444444 444 47888866
No 181
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=78.86 E-value=8.7 Score=32.22 Aligned_cols=101 Identities=9% Similarity=0.055 Sum_probs=61.3
Q ss_pred HHHHHhcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEEcCCC
Q 025860 78 RVQVLVESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGINCTP 157 (247)
Q Consensus 78 q~~~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~NC~~ 157 (247)
|++..+++|+|++.. |... ..++++.++. ++|++... .++.|+.+.+. .|++.|.+-=..
T Consensus 98 ~a~~Ai~AGA~fIvs---P~~~--~~vi~~~~~~--gi~~ipGv-----------~TptEi~~A~~--~Gad~vK~FPa~ 157 (232)
T 4e38_A 98 QALAAKEAGATFVVS---PGFN--PNTVRACQEI--GIDIVPGV-----------NNPSTVEAALE--MGLTTLKFFPAE 157 (232)
T ss_dssp HHHHHHHHTCSEEEC---SSCC--HHHHHHHHHH--TCEEECEE-----------CSHHHHHHHHH--TTCCEEEECSTT
T ss_pred HHHHHHHcCCCEEEe---CCCC--HHHHHHHHHc--CCCEEcCC-----------CCHHHHHHHHH--cCCCEEEECcCc
Confidence 666677889999973 4332 3345556665 57777543 27788888765 489999884432
Q ss_pred hhHHHHHHHHHHhhc-CCCEEEEeCCCCcccccccccccCCCCChHHHHHHHHHHHHcCCeEE
Q 025860 158 PRFISGLILIIKKVT-AKPILIYPNSGEFYDADRKEWVQNTGVSDEDFVSYVSKWCEVGASLV 219 (247)
Q Consensus 158 p~~~~~~l~~l~~~~-~~pl~vyPNaG~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~iI 219 (247)
+..=...|+.++... +.| +.|=+| +++ +.+.+|++.|+..+
T Consensus 158 ~~gG~~~lkal~~p~p~ip--~~ptGG---------------I~~----~n~~~~l~aGa~~~ 199 (232)
T 4e38_A 158 ASGGISMVKSLVGPYGDIR--LMPTGG---------------ITP----SNIDNYLAIPQVLA 199 (232)
T ss_dssp TTTHHHHHHHHHTTCTTCE--EEEBSS---------------CCT----TTHHHHHTSTTBCC
T ss_pred cccCHHHHHHHHHHhcCCC--eeeEcC---------------CCH----HHHHHHHHCCCeEE
Confidence 221246677776542 344 345444 233 34567999887543
No 182
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=78.72 E-value=27 Score=29.04 Aligned_cols=141 Identities=9% Similarity=0.040 Sum_probs=74.4
Q ss_pred HHHHHhcCCCCEEEEecCCCHHHHHHHHHHHHh-hCCCCcEEEEEEEcCCCcccCCCc---HHHHHHHHHhCCCCeEE--
Q 025860 78 RVQVLVESAPDLIAFETIPNKIEAQAYAELLEE-ENIKIPAWFSFNSKDGVNVVSGDS---LLECASIAESCKRVVSV-- 151 (247)
Q Consensus 78 q~~~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~-~~~~~pv~is~~~~~~~~l~~G~~---~~~~~~~~~~~~~~~av-- 151 (247)
.++.+.+.|+|.|+.+ + ..++.+++ ...+.|+++.|...... ..+..+ +.++ +.+.+ .|++.|
T Consensus 50 ~~~~~~~~g~~~i~~~--~------~~~~~~~~~~~~~~~~~v~~~~~~~~-~~d~~~~~~~~~v-~~a~~-~Ga~~v~~ 118 (273)
T 2qjg_A 50 TVNDVAEGGANAVLLH--K------GIVRHGHRGYGKDVGLIIHLSGGTAI-SPNPLKKVIVTTV-EEAIR-MGADAVSI 118 (273)
T ss_dssp HHHHHHHHTCSEEEEC--H------HHHHSCCCSSSCCCEEEEECEECCTT-SSSTTCCEECSCH-HHHHH-TTCSEEEE
T ss_pred HHHHHHhcCCCEEEeC--H------HHHHHHHHhhcCCCCEEEEEcCCCcC-CCCcccchHHHHH-HHHHH-cCCCEEEE
Confidence 5666667899999753 2 22222222 22257888888643211 111111 2333 33333 478887
Q ss_pred EEcCC--ChhHHHHHHHHHHhh---cCCCEEEEeCCCCcccccccccccCCCCChHHHHHHHHHHHHcCCeEEeecCCCC
Q 025860 152 GINCT--PPRFISGLILIIKKV---TAKPILIYPNSGEFYDADRKEWVQNTGVSDEDFVSYVSKWCEVGASLVGGCCRTT 226 (247)
Q Consensus 152 G~NC~--~p~~~~~~l~~l~~~---~~~pl~vyPNaG~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~iIGGCCGt~ 226 (247)
-+|.. ..+.+.+.++.+.+. .+.|+++.-.+ ++. . . ....++....+.++...+.|+.+|+=--..+
T Consensus 119 ~l~~~~~~~~~~~~~~~~v~~~~~~~g~~viv~~~~----~G~--~-l-~~~~~~~~~~~~a~~a~~~Gad~i~~~~~~~ 190 (273)
T 2qjg_A 119 HVNVGSDEDWEAYRDLGMIAETCEYWGMPLIAMMYP----RGK--H-I-QNERDPELVAHAARLGAELGADIVKTSYTGD 190 (273)
T ss_dssp EEEETSTTHHHHHHHHHHHHHHHHHHTCCEEEEEEE----CST--T-C-SCTTCHHHHHHHHHHHHHTTCSEEEECCCSS
T ss_pred EEecCCCCHHHHHHHHHHHHHHHHHcCCCEEEEeCC----CCc--c-c-CCCCCHhHHHHHHHHHHHcCCCEEEECCCCC
Confidence 66654 334344444443332 47887764211 111 0 1 1113455555555777788999988444467
Q ss_pred hHHHHHHHHHh
Q 025860 227 PNTIKGIYRTL 237 (247)
Q Consensus 227 P~hI~al~~~l 237 (247)
++.++.+++.+
T Consensus 191 ~~~l~~i~~~~ 201 (273)
T 2qjg_A 191 IDSFRDVVKGC 201 (273)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHhC
Confidence 88888887665
No 183
>3rpd_A Methionine synthase (B12-independent); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, rossmann fold, Zn, TRA; HET: MSE; 1.50A {Shewanella SP}
Probab=78.66 E-value=7.4 Score=34.69 Aligned_cols=143 Identities=15% Similarity=0.144 Sum_probs=80.8
Q ss_pred HHHHHHHHHHHHHHhcCCCCEEEEecCCCH----HHH-HHHHHHHHhhCCCCcEEEEEE-EcCCC---------cccCC-
Q 025860 69 ETLKDFHRRRVQVLVESAPDLIAFETIPNK----IEA-QAYAELLEEENIKIPAWFSFN-SKDGV---------NVVSG- 132 (247)
Q Consensus 69 ~e~~~~~~~q~~~l~~~gvD~i~~ET~~~~----~E~-~aa~~~~~~~~~~~pv~is~~-~~~~~---------~l~~G- 132 (247)
.++...|++-++.|.++|+|+|-|.- |.+ .+. ..++++++..-.++|.-+.+. |..+. ...+.
T Consensus 167 ~dlA~a~~~ei~~l~~aG~~~IQiDe-P~l~~~~~~~~~~~v~~~n~~~~~~~~~~~iHiC~G~~~~~n~d~~~t~~~~~ 245 (357)
T 3rpd_A 167 WEFAKILNEEAKELEAAGVDIIQFDE-PAFNVFFDEVNDWGIACLERAIEGLKCETAVHICYGYGIKANTDWKKTLGSEW 245 (357)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEEEC-GGGGTCHHHHHHTHHHHHHHHHTTCCSEEEEEECSCCSSHHHHHHHTTSCSCC
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEecC-ccccccHHHHHHHHHHHHHHHHhCCCCceEEEEecCCccCCcccccccccccc
Confidence 56788999999999999999997653 222 332 345566665432445444443 33211 01111
Q ss_pred CcHHHHHHHHHhCCCCeEEEEcCCChhHHHHHHHHHHhhcCCCEEEEeCCCCcccccccccccCCCCChHHHHHHHHHHH
Q 025860 133 DSLLECASIAESCKRVVSVGINCTPPRFISGLILIIKKVTAKPILIYPNSGEFYDADRKEWVQNTGVSDEDFVSYVSKWC 212 (247)
Q Consensus 133 ~~~~~~~~~~~~~~~~~avG~NC~~p~~~~~~l~~l~~~~~~pl~vyPNaG~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (247)
.+..+++..+.+ .+++++.+-+..+..-.++++.+. +.-+ .| |. +|... .+. .++++..+.+++..
T Consensus 246 g~y~~i~~~l~~-~~~D~i~lE~~~~r~~~e~l~~~~---~k~v--~l--Gv-vd~~s-~~v----e~~eev~~ri~~a~ 311 (357)
T 3rpd_A 246 RQYEEVFPKLQK-SNIDIISLECHNSHVPMELLELIR---GKKV--MV--GA-IDVAT-DTI----ETAEEVADTLRKAL 311 (357)
T ss_dssp CGGGGTHHHHHH-SSCCEEEECCTTCCCCGGGGGGGT---TSEE--EE--EC-SCTTC-SSC----CCHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHh-CCCCEEEEEecCCCCChHHHHhcC---CCEE--Ee--cc-ccCcC-CCC----CCHHHHHHHHHHHH
Confidence 235667777766 689999999964311012333332 2211 11 21 22211 122 46888888888877
Q ss_pred Hc-CCe--EEeecCCCC
Q 025860 213 EV-GAS--LVGGCCRTT 226 (247)
Q Consensus 213 ~~-G~~--iIGGCCGt~ 226 (247)
+. |.. +|.=.||..
T Consensus 312 ~~v~~~~l~lsPdCGl~ 328 (357)
T 3rpd_A 312 KFVDADKLYPCTNCGMT 328 (357)
T ss_dssp TTSCGGGEEEECSSCCT
T ss_pred HhCCcccEEEeCCCCCC
Confidence 63 555 899999953
No 184
>3eol_A Isocitrate lyase; seattle structural center for infectious disease, ssgcid; 2.00A {Brucella melitensis} PDB: 3oq8_A 3e5b_A 3p0x_A*
Probab=78.45 E-value=3 Score=38.36 Aligned_cols=33 Identities=30% Similarity=0.380 Sum_probs=29.7
Q ss_pred HHHHHhcCCCCEEEEecC-CCHHHHHHHHHHHHhh
Q 025860 78 RVQVLVESAPDLIAFETI-PNKIEAQAYAELLEEE 111 (247)
Q Consensus 78 q~~~l~~~gvD~i~~ET~-~~~~E~~aa~~~~~~~ 111 (247)
++.++.+ |+|+|++||. ++++|++.+.+.++..
T Consensus 271 Ra~AY~~-GAD~If~e~~~~~~eei~~f~~~v~~~ 304 (433)
T 3eol_A 271 RAIAYAP-YCDLIWMETSKPDLAQARRFAEAVHKA 304 (433)
T ss_dssp HHHHHGG-GCSEEEECCSSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHh-cCCEEEEeCCCCCHHHHHHHHHHhccc
Confidence 7888888 9999999996 7999999999999863
No 185
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=78.43 E-value=32 Score=29.59 Aligned_cols=114 Identities=14% Similarity=0.166 Sum_probs=65.9
Q ss_pred CeEEEEecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcE
Q 025860 38 PILVAASVGSYGAYLADGSEYSGNYGDAITVETLKDFHRRRVQVLVESAPDLIAFETIPNKIEAQAYAELLEEENIKIPA 117 (247)
Q Consensus 38 ~~~VaGsiGP~g~~l~~g~eY~g~y~~~~s~~e~~~~~~~q~~~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv 117 (247)
..+|.+++ ||| .|. .+.++..+ -+..|.++|++.+=+|-.. |+..-++++.+. +.||
T Consensus 78 ~~~vvaD~-pfg-----------sy~--~s~~~a~~----na~rl~kaGa~aVklEdg~---e~~~~I~al~~a--gIpV 134 (275)
T 1o66_A 78 NAMIVSDL-PFG-----------AYQ--QSKEQAFA----AAAELMAAGAHMVKLEGGV---WMAETTEFLQMR--GIPV 134 (275)
T ss_dssp SSEEEEEC-CTT-----------SSS--SCHHHHHH----HHHHHHHTTCSEEEEECSG---GGHHHHHHHHHT--TCCE
T ss_pred CCeEEEEC-CCC-----------Ccc--CCHHHHHH----HHHHHHHcCCcEEEECCcH---HHHHHHHHHHHc--CCCe
Confidence 35666775 554 343 25555443 2333556999999999864 455556666665 5798
Q ss_pred EEEEEEcCC------CcccCCC--cHHHHHHHH---HhCCCCeEEEEcCCChhHHHHHHHHHHhhcCCCEEEE
Q 025860 118 WFSFNSKDG------VNVVSGD--SLLECASIA---ESCKRVVSVGINCTPPRFISGLILIIKKVTAKPILIY 179 (247)
Q Consensus 118 ~is~~~~~~------~~l~~G~--~~~~~~~~~---~~~~~~~avG~NC~~p~~~~~~l~~l~~~~~~pl~vy 179 (247)
+.-+=+.+. +...-|. ..+++++.. .+ .|+++|=+-|... ++.+++.+..+.|++..
T Consensus 135 ~gHiGLtPQs~~~~ggf~v~grt~~a~~~i~rA~a~~e-AGA~~ivlE~vp~----~~a~~it~~l~iP~igI 202 (275)
T 1o66_A 135 CAHIGLTPQSVFAFGGYKVQGRGGKAQALLNDAKAHDD-AGAAVVLMECVLA----ELAKKVTETVSCPTIGI 202 (275)
T ss_dssp EEEEESCGGGTTC-----------CHHHHHHHHHHHHH-TTCSEEEEESCCH----HHHHHHHHHCSSCEEEE
T ss_pred EeeeccCceeecccCCeEEEeChHHHHHHHHHHHHHHH-cCCcEEEEecCCH----HHHHHHHHhCCCCEEEE
Confidence 855543321 1111232 234444333 34 6999999999853 35666777778897654
No 186
>4exq_A UPD, URO-D, uroporphyrinogen decarboxylase; ssgcid, NIH, SBRI, heme biosynthesis, structural GENO niaid; 1.65A {Burkholderia thailandensis}
Probab=78.28 E-value=32 Score=30.47 Aligned_cols=140 Identities=14% Similarity=0.101 Sum_probs=78.6
Q ss_pred HHHHHHHHHHHHhcCCCCEE-EEecCCCH---HHHHH--------HHHHHHhhCC--CCcEEEEEEEcCCCcccCCCcHH
Q 025860 71 LKDFHRRRVQVLVESAPDLI-AFETIPNK---IEAQA--------YAELLEEENI--KIPAWFSFNSKDGVNVVSGDSLL 136 (247)
Q Consensus 71 ~~~~~~~q~~~l~~~gvD~i-~~ET~~~~---~E~~a--------a~~~~~~~~~--~~pv~is~~~~~~~~l~~G~~~~ 136 (247)
+.+...+.++..+++|+|.| +|++...+ ++.+. +++.+++... +.|++ -|++ |. .
T Consensus 195 i~~~~~~y~~~qi~aGad~i~ifDs~~~~Lsp~~f~ef~~Py~k~i~~~l~~~~~g~~~pvi-~f~~--------g~--~ 263 (368)
T 4exq_A 195 NAQAVAAYLNAQIEAGAQAVMIFDTWGGALADGAYQRFSLDYIRRVVAQLKREHDGARVPAI-AFTK--------GG--G 263 (368)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEEEETTGGGSCTTHHHHHTHHHHHHHHHTSCCEETTEECCEE-EEET--------TC--G
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeCCccccCCHHHHHHHhHHHHHHHHHHHHHhcCCCCCcEE-EEcC--------Cc--H
Confidence 44444455556677999998 56865432 22222 2222222111 25654 3432 11 1
Q ss_pred HHHHHHHhCCCCeEEEEcCC-ChhHHHHHHHHHHhhcCCCEEEEeCCCCcccccccccccCCCCChHHHHHHHHHHHHc-
Q 025860 137 ECASIAESCKRVVSVGINCT-PPRFISGLILIIKKVTAKPILIYPNSGEFYDADRKEWVQNTGVSDEDFVSYVSKWCEV- 214 (247)
Q Consensus 137 ~~~~~~~~~~~~~avG~NC~-~p~~~~~~l~~l~~~~~~pl~vyPNaG~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~- 214 (247)
..+..+.+ .++++|++.-. ++..+.+. + ...+.++-|--. ..+. -++++..+.+++.++.
T Consensus 264 ~~l~~l~~-~g~d~i~~d~~~dl~~ak~~---~----g~~~~l~Gnldp-------~~L~---gt~e~I~~~v~~~l~~~ 325 (368)
T 4exq_A 264 LWLEDLAA-TGVDAVGLDWTVNLGRARER---V----AGRVALQGNLDP-------TILF---APPEAIRAEARAVLDSY 325 (368)
T ss_dssp GGHHHHHT-SSCSEEECCTTSCHHHHHHH---H----TTSSEEEEEECG-------GGGG---SCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHH-hCCCEEeeCCCCCHHHHHHH---h----CCCEEEEECCCH-------HHhC---CCHHHHHHHHHHHHHHh
Confidence 23344555 58999998754 55443322 2 222445555421 1121 2578888888888763
Q ss_pred ---CCeEEeecCC----CChHHHHHHHHHhhC
Q 025860 215 ---GASLVGGCCR----TTPNTIKGIYRTLSN 239 (247)
Q Consensus 215 ---G~~iIGGCCG----t~P~hI~al~~~l~~ 239 (247)
+--|++--|| |.|++++++.+++++
T Consensus 326 g~~~g~I~n~Ghgi~p~tp~Env~a~veav~~ 357 (368)
T 4exq_A 326 GNHPGHVFNLGHGISQFTPPEHVAELVDEVHR 357 (368)
T ss_dssp CSCSCEEEEESSCCCTTCCHHHHHHHHHHHHH
T ss_pred CCCCCEEEeCCCCCCCCcCHHHHHHHHHHHHH
Confidence 3578888888 568999999888764
No 187
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=78.10 E-value=0.95 Score=38.74 Aligned_cols=37 Identities=5% Similarity=0.220 Sum_probs=30.0
Q ss_pred HHHHHHhcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEE
Q 025860 77 RRVQVLVESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAW 118 (247)
Q Consensus 77 ~q~~~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~ 118 (247)
++++++.++|+|.|++|.+++.++++.+.+.+ +.|+-
T Consensus 172 ~ra~a~~eAGAd~i~~e~~~~~~~~~~i~~~~-----~~P~n 208 (255)
T 2qiw_A 172 KRIKLMEQAGARSVYPVGLSTAEQVERLVDAV-----SVPVN 208 (255)
T ss_dssp HHHHHHHHHTCSEEEECCCCSHHHHHHHHTTC-----SSCBE
T ss_pred HHHHHHHHcCCcEEEEcCCCCHHHHHHHHHhC-----CCCEE
Confidence 38899999999999999999999888765533 36764
No 188
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=77.93 E-value=33 Score=29.71 Aligned_cols=174 Identities=10% Similarity=0.063 Sum_probs=81.9
Q ss_pred CeEEEEecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCEEEEec---CCC------HHHHHHHHHHH
Q 025860 38 PILVAASVGSYGAYLADGSEYSGNYGDAITVETLKDFHRRRVQVLVESAPDLIAFET---IPN------KIEAQAYAELL 108 (247)
Q Consensus 38 ~~~VaGsiGP~g~~l~~g~eY~g~y~~~~s~~e~~~~~~~q~~~l~~~gvD~i~~ET---~~~------~~E~~aa~~~~ 108 (247)
+.+|-|-+-=+..++.||..|. +.+.+.+ +++.+++.|+|+|=+-. -|. -+|++-++.++
T Consensus 22 ~~~iMgilNvTPDSFsdgg~~~-------~~~~a~~----~a~~~v~~GAdiIDIGgeSTrPga~~v~~~eE~~Rv~pvi 90 (294)
T 2y5s_A 22 RPLVMGILNATPDSFSDGGRFL-------ARDDALR----RAERMIAEGADLLDIGGESTRPGAPPVPLDEELARVIPLV 90 (294)
T ss_dssp SCEEEEEEECCC-----------------CTTHHHH----HHHHHHHTTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHH
T ss_pred CceEEEEEeCCCCCCCCCCCcC-------CHHHHHH----HHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHH
Confidence 3578887766667777775541 3345544 66677789999996654 233 56776666655
Q ss_pred HhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEE-EEcCCChhHHHHHHHHHHhhcCCCEEEEeCCCCccc
Q 025860 109 EEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSV-GINCTPPRFISGLILIIKKVTAKPILIYPNSGEFYD 187 (247)
Q Consensus 109 ~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~av-G~NC~~p~~~~~~l~~l~~~~~~pl~vyPNaG~~~d 187 (247)
+... +..+.+|+...+ .++++...+. |++.| -+|-..-+.|.++ .+ ..+.|+++.++.|.+.+
T Consensus 91 ~~l~-~~~vpiSIDT~~----------~~Va~aAl~a-Ga~iINdVsg~~d~~m~~~---~a-~~~~~vVlmh~~G~p~t 154 (294)
T 2y5s_A 91 EALR-PLNVPLSIDTYK----------PAVMRAALAA-GADLINDIWGFRQPGAIDA---VR-DGNSGLCAMHMLGEPQT 154 (294)
T ss_dssp HHHG-GGCSCEEEECCC----------HHHHHHHHHH-TCSEEEETTTTCSTTHHHH---HS-SSSCEEEEECCCEETTT
T ss_pred HHHh-hCCCeEEEECCC----------HHHHHHHHHc-CCCEEEECCCCCchHHHHH---HH-HhCCCEEEECCCCCCcc
Confidence 5532 113445664321 2333333332 44432 2333222233333 32 34889999999775432
Q ss_pred c--cccccccCCCCChHHHHHHHHHHHHcCCe---EEeec---CCCCh-HHHHHHHHHhh
Q 025860 188 A--DRKEWVQNTGVSDEDFVSYVSKWCEVGAS---LVGGC---CRTTP-NTIKGIYRTLS 238 (247)
Q Consensus 188 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~G~~---iIGGC---CGt~P-~hI~al~~~l~ 238 (247)
. ....|..--..--+.+.+.+....+.|+. ||=-. -+-+. +|--++-+.+.
T Consensus 155 m~~~~~~y~dv~~ev~~~l~~~i~~a~~~Gi~~~~IilDPG~Gf~kt~~~~n~~ll~~l~ 214 (294)
T 2y5s_A 155 MQVGEPDYGDVVTDVRDFLAARAQALRDAGVAAERICVDPGFGFGKAVVDDNYALLAALP 214 (294)
T ss_dssp TEECCCCCSSHHHHHHHHHHHHHHHHHHTTCCGGGEEEECCTTSSSCTTHHHHHHHHTGG
T ss_pred ccccCCccccHHHHHHHHHHHHHHHHHHcCCChhhEEEeCCCcccccchHHHHHHHHHHH
Confidence 1 00111100000023455666777788986 54221 13345 55444434443
No 189
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=77.76 E-value=20 Score=32.65 Aligned_cols=67 Identities=16% Similarity=0.229 Sum_probs=41.7
Q ss_pred HHHHHHHHhCCCCeEEEEcCCCh-----------hHHHHHHHHHHhh--------------------cCCC-EEEEeCCC
Q 025860 136 LECASIAESCKRVVSVGINCTPP-----------RFISGLILIIKKV--------------------TAKP-ILIYPNSG 183 (247)
Q Consensus 136 ~~~~~~~~~~~~~~avG~NC~~p-----------~~~~~~l~~l~~~--------------------~~~p-l~vyPNaG 183 (247)
.++++.+.+ .+++|-||+++| +.+.++|+.+++. .++| |+|.--.+
T Consensus 202 ~~~a~~l~~--~ad~ieiNiScPNt~Gl~~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~~~~~~~~~~~~P~V~VKi~pd 279 (415)
T 3i65_A 202 KYCINKIGR--YADYIAINVSSPNTPGLRDNQEAGKLKNIILSVKEEIDNLEKNNIMNDEFLWFNTTKKKPLVFVKLAPD 279 (415)
T ss_dssp HHHHHHHGG--GCSEEEEECCCCC--------CCHHHHHHHHHHHHHHHHHHHHCCSCHHHHCCSSSSSCCEEEEEECSC
T ss_pred HHHHHHHHh--hCCEEEEECCCCCCCCcccccCHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCeEEEEecCC
Confidence 344555544 389999999754 4556666666553 2578 67665321
Q ss_pred CcccccccccccCCCCChHHHHHHHHHHHHcCCeEE
Q 025860 184 EFYDADRKEWVQNTGVSDEDFVSYVSKWCEVGASLV 219 (247)
Q Consensus 184 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~iI 219 (247)
.+.+++.+.++...+.|+..|
T Consensus 280 ---------------~~~~~i~~iA~~a~~aGaDgI 300 (415)
T 3i65_A 280 ---------------LNQEQKKEIADVLLETNIDGM 300 (415)
T ss_dssp ---------------CCHHHHHHHHHHHHHHTCSEE
T ss_pred ---------------CCHHHHHHHHHHHHHcCCcEE
Confidence 234567777777777776654
No 190
>1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A*
Probab=77.71 E-value=40 Score=30.39 Aligned_cols=112 Identities=12% Similarity=0.164 Sum_probs=63.7
Q ss_pred CCHHHHHH----HHHHHHHHHhcCCCCEEEE----ecCC------CHHH----HHHHHHHHHhhCCCCcEEEEEEEcCCC
Q 025860 66 ITVETLKD----FHRRRVQVLVESAPDLIAF----ETIP------NKIE----AQAYAELLEEENIKIPAWFSFNSKDGV 127 (247)
Q Consensus 66 ~s~~e~~~----~~~~q~~~l~~~gvD~i~~----ET~~------~~~E----~~aa~~~~~~~~~~~pv~is~~~~~~~ 127 (247)
.+.+++.+ +-+..++.|.+.|++.-++ |+-. +... ++++.+++|+..++.+|++.++...+
T Consensus 130 ~~~~~l~~~~~~yt~~~l~~l~~~g~~~~~vqvGNEi~~g~~~~~~~~~la~ll~ag~~aVR~v~p~~~V~ih~~~~~~- 208 (399)
T 1ur4_A 130 LNFEDKKTALYQYTKQSLKAMKAAGIDIGMVQVGNETNGGLAGETDWAKMSQLFNAGSQAVRETDSNILVALHFTNPET- 208 (399)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEESSSCSSCBTTBCCHHHHHHHHHHHHHHHHHHCTTSEEEEEECCTTS-
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEccccccccCCcccHHHHHHHHHHHHHHHHHhCCCCeEEEEeCCCcc-
Confidence 35665543 4446777787788655333 4322 2333 44556778887666778776643221
Q ss_pred cccCCCcHHHHHHHHHh-CCCCeEEEEcCCC-----hhHHHHHHHHHHhhcCCCEEE----EeCC
Q 025860 128 NVVSGDSLLECASIAES-CKRVVSVGINCTP-----PRFISGLILIIKKVTAKPILI----YPNS 182 (247)
Q Consensus 128 ~l~~G~~~~~~~~~~~~-~~~~~avG~NC~~-----p~~~~~~l~~l~~~~~~pl~v----yPNa 182 (247)
-..+......+.. ....|.||+|+-. .+.+...|+.+.+.-++|+++ ||..
T Consensus 209 ----~~~~~~~~d~l~~~g~d~DvIG~syYp~W~~~l~~l~~~l~~l~~rygKpV~v~EtG~~~~ 269 (399)
T 1ur4_A 209 ----SGRYAWIAETLHRHHVDYDVFASSYYPFWHGTLKNLTSVLTSVADTYGKKVMVAETSYTYT 269 (399)
T ss_dssp ----TTHHHHHHHHHHHTTCCCSEEEEEECTTTSCCHHHHHHHHHHHHHHHCCEEEEEEECCCSC
T ss_pred ----hHHHHHHHHHHHHcCCCcCeEeEecCccchhhHHHHHHHHHHHHHHhCCcEEEEEecCCcc
Confidence 1223333343332 2357999999852 344556667665555899865 5653
No 191
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=77.71 E-value=26 Score=28.58 Aligned_cols=137 Identities=9% Similarity=0.082 Sum_probs=70.8
Q ss_pred HHHHHhcCCCCEEEEecC-----CCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEE
Q 025860 78 RVQVLVESAPDLIAFETI-----PNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVG 152 (247)
Q Consensus 78 q~~~l~~~gvD~i~~ET~-----~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG 152 (247)
.++.+.++|+|.|-+=++ +.... ..++.+++.. ++|+++..- + .++++ ++.+.. .+++.|.
T Consensus 37 ~a~~~~~~Gad~i~v~~~d~~~~~~~~~--~~i~~i~~~~-~ipv~v~gg------I---~~~~~-~~~~l~-~Gad~V~ 102 (244)
T 1vzw_A 37 AALAWQRSGAEWLHLVDLDAAFGTGDNR--ALIAEVAQAM-DIKVELSGG------I---RDDDT-LAAALA-TGCTRVN 102 (244)
T ss_dssp HHHHHHHTTCSEEEEEEHHHHHTSCCCH--HHHHHHHHHC-SSEEEEESS------C---CSHHH-HHHHHH-TTCSEEE
T ss_pred HHHHHHHcCCCEEEEecCchhhcCCChH--HHHHHHHHhc-CCcEEEECC------c---CCHHH-HHHHHH-cCCCEEE
Confidence 556677899999976442 22222 3344445443 689887321 1 23455 333444 4788877
Q ss_pred EcCC---ChhHHHHHHHHHHhhcCCCEEEEeCCCCcccccccccccCCCCChHHHHHHHHHHHHcCCeEEee--------
Q 025860 153 INCT---PPRFISGLILIIKKVTAKPILIYPNSGEFYDADRKEWVQNTGVSDEDFVSYVSKWCEVGASLVGG-------- 221 (247)
Q Consensus 153 ~NC~---~p~~~~~~l~~l~~~~~~pl~vyPNaG~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~iIGG-------- 221 (247)
+.-. .|+.+.++++.+.. +.-+.+-+..|.+. ...|..... ++.+ .+++..+.|+..|.-
T Consensus 103 lg~~~l~~p~~~~~~~~~~g~--~~~~~l~~~~g~v~---~~g~~~~~~-~~~e---~~~~~~~~G~~~i~~~~~~~~~~ 173 (244)
T 1vzw_A 103 LGTAALETPEWVAKVIAEHGD--KIAVGLDVRGTTLR---GRGWTRDGG-DLYE---TLDRLNKEGCARYVVTDIAKDGT 173 (244)
T ss_dssp ECHHHHHCHHHHHHHHHHHGG--GEEEEEEEETTEEC---CSSSCCCCC-BHHH---HHHHHHHTTCCCEEEEEC-----
T ss_pred ECchHhhCHHHHHHHHHHcCC--cEEEEEEccCCEEE---EcCcccCCC-CHHH---HHHHHHhCCCCEEEEeccCcccc
Confidence 7663 56666666665532 23345555444332 235643221 3333 344455567664331
Q ss_pred cCCCChHHHHHHHHHh
Q 025860 222 CCRTTPNTIKGIYRTL 237 (247)
Q Consensus 222 CCGt~P~hI~al~~~l 237 (247)
--|...+.++.+++.+
T Consensus 174 ~~g~~~~~~~~i~~~~ 189 (244)
T 1vzw_A 174 LQGPNLELLKNVCAAT 189 (244)
T ss_dssp --CCCHHHHHHHHHTC
T ss_pred cCCCCHHHHHHHHHhc
Confidence 1234556666666543
No 192
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=77.68 E-value=5.8 Score=33.57 Aligned_cols=85 Identities=15% Similarity=0.110 Sum_probs=52.4
Q ss_pred HHHHHHhcCCCCEEEE-----ecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEE
Q 025860 77 RRVQVLVESAPDLIAF-----ETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSV 151 (247)
Q Consensus 77 ~q~~~l~~~gvD~i~~-----ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~av 151 (247)
+.++.+.++|+|++-+ -.+|++..-..+++.+|+..+++|+-+-+-+.+. ...++.+.+ .|++.|
T Consensus 44 ~~i~~l~~~G~d~lHvDVmDg~FVpnit~G~~~v~~lr~~~p~~~ldvHLmv~~p---------~~~i~~~~~-aGAd~i 113 (246)
T 3inp_A 44 DDVKAVLAAGADNIHFDVMDNHYVPNLTFGPMVLKALRDYGITAGMDVHLMVKPV---------DALIESFAK-AGATSI 113 (246)
T ss_dssp HHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHHHHTCCSCEEEEEECSSC---------HHHHHHHHH-HTCSEE
T ss_pred HHHHHHHHcCCCEEEEEecCCCcCcchhcCHHHHHHHHHhCCCCeEEEEEeeCCH---------HHHHHHHHH-cCCCEE
Confidence 3677788899998876 3457777667788888886546888877765432 233444444 356665
Q ss_pred EEcCCChhHHHHHHHHHHhh
Q 025860 152 GINCTPPRFISGLILIIKKV 171 (247)
Q Consensus 152 G~NC~~p~~~~~~l~~l~~~ 171 (247)
-|=+-..+.+...++.+++.
T Consensus 114 tvH~Ea~~~~~~~i~~ir~~ 133 (246)
T 3inp_A 114 VFHPEASEHIDRSLQLIKSF 133 (246)
T ss_dssp EECGGGCSCHHHHHHHHHTT
T ss_pred EEccccchhHHHHHHHHHHc
Confidence 55543223445555555543
No 193
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=77.67 E-value=2.4 Score=36.68 Aligned_cols=41 Identities=22% Similarity=0.274 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHhcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEE
Q 025860 72 KDFHRRRVQVLVESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAW 118 (247)
Q Consensus 72 ~~~~~~q~~~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~ 118 (247)
.+.-.++++++.++|+|.|++|.+++. +++.+.+. . ++|++
T Consensus 172 a~~~i~rA~a~~eAGA~~ivlE~vp~~-~a~~It~~---l--~iP~i 212 (275)
T 3vav_A 172 AAQLLRDARAVEEAGAQLIVLEAVPTL-VAAEVTRE---L--SIPTI 212 (275)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEESCCHH-HHHHHHHH---C--SSCEE
T ss_pred HHHHHHHHHHHHHcCCCEEEecCCCHH-HHHHHHHh---C--CCCEE
Confidence 345556999999999999999999985 66655443 3 47875
No 194
>2nu8_B SCS-beta, succinyl-COA synthetase beta chain; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.23.4.1 d.142.1.4 PDB: 1scu_B* 2nu6_B* 1jkj_B* 2nu7_B* 2nu9_B* 2nua_B* 2scu_B* 1jll_B* 1cqj_B* 1cqi_B*
Probab=77.59 E-value=28 Score=31.18 Aligned_cols=81 Identities=10% Similarity=0.081 Sum_probs=53.3
Q ss_pred CCHHHHHHHHHHHHHHHhcCCCCEEEEecC---CC-HHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHH
Q 025860 66 ITVETLKDFHRRRVQVLVESAPDLIAFETI---PN-KIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASI 141 (247)
Q Consensus 66 ~s~~e~~~~~~~q~~~l~~~gvD~i~~ET~---~~-~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~ 141 (247)
.+.+.+++.++-. |.+..||.|++-.+ .+ -.-++.+++++++.+.++|+++.+ .|+..++..+.
T Consensus 293 a~~~~~~~~~~~i---l~d~~v~~ilvni~ggi~~~~~vA~gii~a~~~~~~~~pivvrl---------~G~n~~~g~~~ 360 (388)
T 2nu8_B 293 ATKERVTEAFKII---LSDDKVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRL---------EGNNAELGAKK 360 (388)
T ss_dssp CCHHHHHHHHHHH---HTSTTCCEEEEEEESCSSCHHHHHHHHHHHHHHHTCCSCEEEEE---------ESTTHHHHHHH
T ss_pred CCHHHHHHHHHHH---hcCCCCCEEEEEecCCcCCchHHHHHHHHHHHhcCCCCeEEEEe---------CCCCHHHHHHH
Confidence 4666666655522 46789999988554 33 234677888888865579999866 58888888888
Q ss_pred HHhCCCCeEEEEcCCChhHH
Q 025860 142 AESCKRVVSVGINCTPPRFI 161 (247)
Q Consensus 142 ~~~~~~~~avG~NC~~p~~~ 161 (247)
+.+ .++..+ -+.+++..
T Consensus 361 l~~-~g~~~~--~~~~~~~a 377 (388)
T 2nu8_B 361 LAD-SGLNII--AAKGLTDA 377 (388)
T ss_dssp HHT-TCSSEE--ECSSHHHH
T ss_pred HHH-CCCcee--cCCCHHHH
Confidence 876 353333 23455543
No 195
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=77.58 E-value=32 Score=29.40 Aligned_cols=102 Identities=10% Similarity=0.097 Sum_probs=58.4
Q ss_pred CHHHHHHHHHHHHHHHhcCCCCEEEEecCC--------CHHHHHHHHHHHHhhC--CCCcEEEEEEEcCCCccc-CCC--
Q 025860 67 TVETLKDFHRRRVQVLVESAPDLIAFETIP--------NKIEAQAYAELLEEEN--IKIPAWFSFNSKDGVNVV-SGD-- 133 (247)
Q Consensus 67 s~~e~~~~~~~q~~~l~~~gvD~i~~ET~~--------~~~E~~aa~~~~~~~~--~~~pv~is~~~~~~~~l~-~G~-- 133 (247)
+.++..+ -++.|.++|++.+-+|-.. +.+|+..-++++++.- .+.|++|.--.+ ..+. .|.
T Consensus 90 ~~~~~~~----~v~~l~~aGaagv~iED~~~~~~k~l~~~~e~~~~I~aa~~a~~~~g~~~~i~aRtd--a~~~~~g~~~ 163 (275)
T 2ze3_A 90 APEDVRR----TVEHFAALGVAGVNLEDATGLTPTELYDLDSQLRRIEAARAAIDASGVPVFLNARTD--TFLKGHGATD 163 (275)
T ss_dssp SHHHHHH----HHHHHHHTTCSEEEEECBCSSSSSCBCCHHHHHHHHHHHHHHHHHHTSCCEEEEECC--TTTTTCSSSH
T ss_pred CHHHHHH----HHHHHHHcCCcEEEECCCcCCCCCccCCHHHHHHHHHHHHHhHhhcCCCeEEEEech--hhhccccccc
Confidence 4445444 4566677999999999875 3344444444443320 036766555332 2211 122
Q ss_pred --cHHHHHHHHHh--CCCCeEEEEcCC-ChhHHHHHHHHHHhhcCCCEEE
Q 025860 134 --SLLECASIAES--CKRVVSVGINCT-PPRFISGLILIIKKVTAKPILI 178 (247)
Q Consensus 134 --~~~~~~~~~~~--~~~~~avG~NC~-~p~~~~~~l~~l~~~~~~pl~v 178 (247)
.++++++.... ..|+++|=+-|. +++.+.. +.+..+.|+.+
T Consensus 164 ~~~~~~ai~Ra~ay~eAGAd~i~~e~~~~~~~~~~----i~~~~~~P~n~ 209 (275)
T 2ze3_A 164 EERLAETVRRGQAYADAGADGIFVPLALQSQDIRA----LADALRVPLNV 209 (275)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEECTTCCCHHHHHH----HHHHCSSCEEE
T ss_pred hhhHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHH----HHHhcCCCEEE
Confidence 46777766542 258999999997 3554444 44445789743
No 196
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=77.57 E-value=14 Score=33.01 Aligned_cols=96 Identities=8% Similarity=-0.046 Sum_probs=57.0
Q ss_pred HHHHHHHHHhCCCCeEEEEcCCC---------h-----------------hHHHHHHHHHHhhcC-CCEEEEeCCCCccc
Q 025860 135 LLECASIAESCKRVVSVGINCTP---------P-----------------RFISGLILIIKKVTA-KPILIYPNSGEFYD 187 (247)
Q Consensus 135 ~~~~~~~~~~~~~~~avG~NC~~---------p-----------------~~~~~~l~~l~~~~~-~pl~vyPNaG~~~d 187 (247)
+.++++.+.+ .|+|+|=|||.+ | ..+.++++.+++... .||++.-+.+..++
T Consensus 168 f~~aA~~a~~-aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~v~vrls~~~~~~ 246 (377)
T 2r14_A 168 YRQAAQRAKR-AGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRARFPLEVVDAVAEVFGPERVGIRLTPFLELF 246 (377)
T ss_dssp HHHHHHHHHH-HTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCCT
T ss_pred HHHHHHHHHH-cCCCEEEEcCcccchHHhccCCccccCCCccCcchhhchHHHHHHHHHHHHHcCCCcEEEEeccccccC
Confidence 3455555555 589999999864 2 235666777777653 29999877653221
Q ss_pred ccccccccCCCCChHHHHHHHHHHHHcCCeEEeecCCC--------ChHHHHHHHHHh
Q 025860 188 ADRKEWVQNTGVSDEDFVSYVSKWCEVGASLVGGCCRT--------TPNTIKGIYRTL 237 (247)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~iIGGCCGt--------~P~hI~al~~~l 237 (247)
+.... .+.+++.+.++.+.+.|+.+|-=-.|+ ..+.++.+++.+
T Consensus 247 ~~~~~------~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~~~~~~~~~ik~~~ 298 (377)
T 2r14_A 247 GLTDD------EPEAMAFYLAGELDRRGLAYLHFNEPDWIGGDITYPEGFREQMRQRF 298 (377)
T ss_dssp TCCCS------CHHHHHHHHHHHHHHTTCSEEEEECCC------CCCTTHHHHHHHHC
T ss_pred CCCCC------CCHHHHHHHHHHHHHcCCCEEEEeCCcccCCCCcchHHHHHHHHHHC
Confidence 11111 235667777888888887776433332 223456666654
No 197
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=77.48 E-value=12 Score=31.66 Aligned_cols=91 Identities=12% Similarity=0.104 Sum_probs=56.8
Q ss_pred HHHHHHHhcCCCCEEEEecCCC----------------------HHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCC
Q 025860 76 RRRVQVLVESAPDLIAFETIPN----------------------KIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGD 133 (247)
Q Consensus 76 ~~q~~~l~~~gvD~i~~ET~~~----------------------~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~ 133 (247)
.+.++.|.++|+|+|-+-.-.+ +......++.+|+...++|+.+-... +.....|
T Consensus 34 ~~~~~~l~~~GaD~ieig~P~sdp~~DG~~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pv~lm~y~--n~v~~~g- 110 (268)
T 1qop_A 34 LKIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAGVTPAQCFEMLAIIREKHPTIPIGLLMYA--NLVFNNG- 110 (268)
T ss_dssp HHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSSSCEEEEECH--HHHHTTC-
T ss_pred HHHHHHHHHCCCCEEEECCCCCCccCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEEcc--cHHHHhh-
Confidence 4478888899999998876221 12223455666666337897763111 1122223
Q ss_pred cHHHHHHHHHhCCCCeEEEEcCCChhHHHHHHHHHHhh
Q 025860 134 SLLECASIAESCKRVVSVGINCTPPRFISGLILIIKKV 171 (247)
Q Consensus 134 ~~~~~~~~~~~~~~~~avG~NC~~p~~~~~~l~~l~~~ 171 (247)
++..++.+.+ .|+++|-+....++.+..+++.++++
T Consensus 111 -~~~~~~~~~~-aGadgii~~d~~~e~~~~~~~~~~~~ 146 (268)
T 1qop_A 111 -IDAFYARCEQ-VGVDSVLVADVPVEESAPFRQAALRH 146 (268)
T ss_dssp -HHHHHHHHHH-HTCCEEEETTCCGGGCHHHHHHHHHT
T ss_pred -HHHHHHHHHH-cCCCEEEEcCCCHHHHHHHHHHHHHc
Confidence 3666666666 47888888877677777777777664
No 198
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=77.32 E-value=32 Score=29.08 Aligned_cols=71 Identities=14% Similarity=0.229 Sum_probs=43.9
Q ss_pred HHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEEcCCC-------------hhHHHHHHHHHHhh
Q 025860 105 AELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGINCTP-------------PRFISGLILIIKKV 171 (247)
Q Consensus 105 ~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~NC~~-------------p~~~~~~l~~l~~~ 171 (247)
++.+++..++.|+++++...+ -+.+.++++.+.+..++++|=+|+.+ |+.+.++++.+++.
T Consensus 89 ~~~~~~~~~~~p~~v~l~~~~------~~~~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g~~~~~~~eii~~v~~~ 162 (311)
T 1ep3_A 89 LPWLNENFPELPIIANVAGSE------EADYVAVCAKIGDAANVKAIELNISCPNVKHGGQAFGTDPEVAAALVKACKAV 162 (311)
T ss_dssp HHHHHHHCTTSCEEEEECCSS------HHHHHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGGGCHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCCcEEEEEcCCC------HHHHHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhcCCHHHHHHHHHHHHHh
Confidence 334454222689999985321 12344555555431478988777653 34567888888887
Q ss_pred cCCCEEEEeC
Q 025860 172 TAKPILIYPN 181 (247)
Q Consensus 172 ~~~pl~vyPN 181 (247)
.+.|+++.-.
T Consensus 163 ~~~pv~vk~~ 172 (311)
T 1ep3_A 163 SKVPLYVKLS 172 (311)
T ss_dssp CSSCEEEEEC
T ss_pred cCCCEEEEEC
Confidence 7899887643
No 199
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=77.20 E-value=5.9 Score=37.44 Aligned_cols=101 Identities=17% Similarity=0.168 Sum_probs=62.7
Q ss_pred HHHHHhcCCCCEEEEecCCCHHHH-------------HHHHHHHHhhCCCCcEEEEEEEcC-------------------
Q 025860 78 RVQVLVESAPDLIAFETIPNKIEA-------------QAYAELLEEENIKIPAWFSFNSKD------------------- 125 (247)
Q Consensus 78 q~~~l~~~gvD~i~~ET~~~~~E~-------------~aa~~~~~~~~~~~pv~is~~~~~------------------- 125 (247)
.++.++++|+|.+.+-|-. +... ..+-++.++++ +-.+++++.++.
T Consensus 352 ~a~~~l~aGad~V~igt~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~g-~~~ivv~iD~~~~~~~~~~~~~~~~~~~~~~ 429 (555)
T 1jvn_A 352 VASLYFRSGADKVSIGTDA-VYAAEKYYELGNRGDGTSPIETISKAYG-AQAVVISVDPKRVYVNSQADTKNKVFETEYP 429 (555)
T ss_dssp HHHHHHHHTCSEEEECHHH-HHHHHHHHHTTSCCCSCSHHHHHHHHHC-GGGEEEEECEEEEEESSGGGCSSCCEECSSC
T ss_pred HHHHHHHcCCCEEEECCHH-hhCchhhccccccccCHHHHHHHHHHhC-CCcEEEEEEcccccccccccccccccccccc
Confidence 3555667899999998865 3221 23344555554 357888998852
Q ss_pred --CC-------cccCC------CcHHHHHHHHHhCCCCeEEEEcCCChhH-----HHHHHHHHHhhcCCCEEEEeCCC
Q 025860 126 --GV-------NVVSG------DSLLECASIAESCKRVVSVGINCTPPRF-----ISGLILIIKKVTAKPILIYPNSG 183 (247)
Q Consensus 126 --~~-------~l~~G------~~~~~~~~~~~~~~~~~avG~NC~~p~~-----~~~~l~~l~~~~~~pl~vyPNaG 183 (247)
++ ...+| .+..+.++.+.+ .+++.|-++...-+. =..+++.+.+..+.|++ .|+|
T Consensus 430 ~~~g~~~~~~~v~~~Gw~~~~~~~~~e~a~~~~~-~Ga~~il~t~~~~dG~~~G~d~~li~~l~~~~~iPVI--asGG 504 (555)
T 1jvn_A 430 GPNGEKYCWYQCTIKGGRESRDLGVWELTRACEA-LGAGEILLNCIDKDGSNSGYDLELIEHVKDAVKIPVI--ASSG 504 (555)
T ss_dssp CTTCCCEEEEEEEETTTTEEEEEEHHHHHHHHHH-TTCCEEEECCGGGTTTCSCCCHHHHHHHHHHCSSCEE--ECSC
T ss_pred CCCCCcceeEEEEEecCccCCCCCHHHHHHHHHH-cCCCEEEEeCCCCCCCCCCCCHHHHHHHHHhCCccEE--EECC
Confidence 11 01122 346677887877 589999887732111 15678888888889964 4555
No 200
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=77.20 E-value=12 Score=33.45 Aligned_cols=66 Identities=8% Similarity=-0.044 Sum_probs=43.3
Q ss_pred HHHHHHHHhcCCCCEEEEec-CCCHHHHHHHHHHHHhhCCCCcEEEE-EEEcCCCcccCCCcHHHHHHHHHhCCCCeEEE
Q 025860 75 HRRRVQVLVESAPDLIAFET-IPNKIEAQAYAELLEEENIKIPAWFS-FNSKDGVNVVSGDSLLECASIAESCKRVVSVG 152 (247)
Q Consensus 75 ~~~q~~~l~~~gvD~i~~ET-~~~~~E~~aa~~~~~~~~~~~pv~is-~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG 152 (247)
..++++.++++|+|+|.+-+ ..+...+...++.+++..+++|+++- + .+++++.. +.+ .|+|+|-
T Consensus 101 ~~e~~~~a~~aGvdvI~id~a~G~~~~~~e~I~~ir~~~~~~~Vi~G~V-----------~T~e~A~~-a~~-aGaD~I~ 167 (361)
T 3r2g_A 101 ELQRAEALRDAGADFFCVDVAHAHAKYVGKTLKSLRQLLGSRCIMAGNV-----------ATYAGADY-LAS-CGADIIK 167 (361)
T ss_dssp HHHHHHHHHHTTCCEEEEECSCCSSHHHHHHHHHHHHHHTTCEEEEEEE-----------CSHHHHHH-HHH-TTCSEEE
T ss_pred HHHHHHHHHHcCCCEEEEeCCCCCcHhHHHHHHHHHHhcCCCeEEEcCc-----------CCHHHHHH-HHH-cCCCEEE
Confidence 45688889999999998864 33444445566777775336899873 2 24555544 444 4788877
Q ss_pred E
Q 025860 153 I 153 (247)
Q Consensus 153 ~ 153 (247)
+
T Consensus 168 V 168 (361)
T 3r2g_A 168 A 168 (361)
T ss_dssp E
T ss_pred E
Confidence 6
No 201
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=77.09 E-value=20 Score=30.12 Aligned_cols=91 Identities=14% Similarity=0.145 Sum_probs=56.9
Q ss_pred HHHHHHHhcCCCCEEEEecCCC-----H-----------------HHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCC
Q 025860 76 RRRVQVLVESAPDLIAFETIPN-----K-----------------IEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGD 133 (247)
Q Consensus 76 ~~q~~~l~~~gvD~i~~ET~~~-----~-----------------~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~ 133 (247)
.+.++.|.++|||+|-+-+-.+ - +....+++.+++..+++|+.+ ++.. +.....
T Consensus 34 ~~~~~~l~~~G~D~IElG~P~sdP~adgp~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pi~~-m~y~-n~v~~~-- 109 (262)
T 2ekc_A 34 LKAFKEVLKNGTDILEIGFPFSDPVADGPTIQVAHEVALKNGIRFEDVLELSETLRKEFPDIPFLL-MTYY-NPIFRI-- 109 (262)
T ss_dssp HHHHHHHHHTTCSEEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEEE-ECCH-HHHHHH--
T ss_pred HHHHHHHHHcCCCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhcCCCCEEE-EecC-cHHHHh--
Confidence 4478888899999998876222 1 122233555565522689877 3110 111112
Q ss_pred cHHHHHHHHHhCCCCeEEEEcCCChhHHHHHHHHHHhh
Q 025860 134 SLLECASIAESCKRVVSVGINCTPPRFISGLILIIKKV 171 (247)
Q Consensus 134 ~~~~~~~~~~~~~~~~avG~NC~~p~~~~~~l~~l~~~ 171 (247)
.++..++.+.+ .|++++-+....++.+..+++.++++
T Consensus 110 g~~~f~~~~~~-aG~dgvii~dl~~ee~~~~~~~~~~~ 146 (262)
T 2ekc_A 110 GLEKFCRLSRE-KGIDGFIVPDLPPEEAEELKAVMKKY 146 (262)
T ss_dssp CHHHHHHHHHH-TTCCEEECTTCCHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHH-cCCCEEEECCCCHHHHHHHHHHHHHc
Confidence 23566776766 58999999888888888888777665
No 202
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=76.45 E-value=27 Score=27.83 Aligned_cols=83 Identities=13% Similarity=0.062 Sum_probs=48.2
Q ss_pred HHHHHhcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEEcCCC
Q 025860 78 RVQVLVESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGINCTP 157 (247)
Q Consensus 78 q~~~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~NC~~ 157 (247)
+++.+.+.|+|.+.+.... ...++..++. +.++++. + .++.++.... . .+++.|+++-+.
T Consensus 72 ~i~~a~~~Gad~V~~~~~~-----~~~~~~~~~~--g~~~~~g--~---------~t~~e~~~a~-~-~G~d~v~v~~t~ 131 (212)
T 2v82_A 72 QVDALARMGCQLIVTPNIH-----SEVIRRAVGY--GMTVCPG--C---------ATATEAFTAL-E-AGAQALKIFPSS 131 (212)
T ss_dssp HHHHHHHTTCCEEECSSCC-----HHHHHHHHHT--TCEEECE--E---------CSHHHHHHHH-H-TTCSEEEETTHH
T ss_pred HHHHHHHcCCCEEEeCCCC-----HHHHHHHHHc--CCCEEee--c---------CCHHHHHHHH-H-CCCCEEEEecCC
Confidence 6777788999999865521 2234556665 3566655 1 2456665543 3 589999986543
Q ss_pred hhHHHHHHHHHHhhcC--CCEEEEeCCC
Q 025860 158 PRFISGLILIIKKVTA--KPILIYPNSG 183 (247)
Q Consensus 158 p~~~~~~l~~l~~~~~--~pl~vyPNaG 183 (247)
+. -...++.+.+..+ .| +++-+|
T Consensus 132 ~~-g~~~~~~l~~~~~~~ip--via~GG 156 (212)
T 2v82_A 132 AF-GPQYIKALKAVLPSDIA--VFAVGG 156 (212)
T ss_dssp HH-CHHHHHHHHTTSCTTCE--EEEESS
T ss_pred CC-CHHHHHHHHHhccCCCe--EEEeCC
Confidence 22 2355566655443 44 444444
No 203
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=76.38 E-value=20 Score=31.69 Aligned_cols=86 Identities=10% Similarity=0.116 Sum_probs=52.2
Q ss_pred HHHHHHHHhcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEEc
Q 025860 75 HRRRVQVLVESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGIN 154 (247)
Q Consensus 75 ~~~q~~~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~N 154 (247)
+.++++.+.+.|+|++.+= +... ....++.+++. ++|+|+++ .+++++.. +.+ .++|+|.+.
T Consensus 111 ~~~~~~~~~~~g~~~V~~~-~g~~--~~~~i~~~~~~--g~~v~~~v-----------~t~~~a~~-a~~-~GaD~i~v~ 172 (369)
T 3bw2_A 111 YDAKLAVLLDDPVPVVSFH-FGVP--DREVIARLRRA--GTLTLVTA-----------TTPEEARA-VEA-AGADAVIAQ 172 (369)
T ss_dssp HHHHHHHHHHSCCSEEEEE-SSCC--CHHHHHHHHHT--TCEEEEEE-----------SSHHHHHH-HHH-TTCSEEEEE
T ss_pred HHHHHHHHHhcCCCEEEEe-CCCC--cHHHHHHHHHC--CCeEEEEC-----------CCHHHHHH-HHH-cCCCEEEEe
Confidence 3567888888999998763 2221 12334445554 57888865 24556544 444 579999883
Q ss_pred CC------C---h--------hHHHHHHHHHHhhcCCCEEE
Q 025860 155 CT------P---P--------RFISGLILIIKKVTAKPILI 178 (247)
Q Consensus 155 C~------~---p--------~~~~~~l~~l~~~~~~pl~v 178 (247)
.. + + .....+++.+++..++|+++
T Consensus 173 g~~~GGh~g~~~~~~~~~~~~~~~~~~l~~i~~~~~iPVia 213 (369)
T 3bw2_A 173 GVEAGGHQGTHRDSSEDDGAGIGLLSLLAQVREAVDIPVVA 213 (369)
T ss_dssp CTTCSEECCCSSCCGGGTTCCCCHHHHHHHHHHHCSSCEEE
T ss_pred CCCcCCcCCCcccccccccccccHHHHHHHHHHhcCceEEE
Confidence 31 1 0 12367777887777888643
No 204
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=76.20 E-value=27 Score=33.29 Aligned_cols=113 Identities=15% Similarity=0.125 Sum_probs=67.9
Q ss_pred CCHHH---HHHHHHHHHHHHhcCCCCEEEEecC----------C-----------C-HHHH---HHHHHHHHh-hCCCCc
Q 025860 66 ITVET---LKDFHRRRVQVLVESAPDLIAFETI----------P-----------N-KIEA---QAYAELLEE-ENIKIP 116 (247)
Q Consensus 66 ~s~~e---~~~~~~~q~~~l~~~gvD~i~~ET~----------~-----------~-~~E~---~aa~~~~~~-~~~~~p 116 (247)
+|.+| +.+.|.+.++.+.++|.|.|=+-.- | + ...+ ..+++++++ .+.+.|
T Consensus 131 ~t~~ei~~~i~~~~~aA~~a~~aGfd~veih~~~gyl~~qFlsp~~n~r~d~yGgs~~~r~r~~~eiv~avr~~vG~~~~ 210 (671)
T 1ps9_A 131 LSHEEILQLIDNFARCAQLAREAGYDGVEVMGSEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERVGNDFI 210 (671)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECBTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCSSSE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHhCCCccCCCcCcCCCcHHHHHHHHHHHHHHHHHHcCCCce
Confidence 55555 4567887888888899999854211 1 1 1233 344555555 355789
Q ss_pred EEEEEEEcCCCcccCCCcHHHHHH---HHHhCCCCeEEEEcC-----C--------ChhHHHHHHHHHHhhcCCCEEEEe
Q 025860 117 AWFSFNSKDGVNVVSGDSLLECAS---IAESCKRVVSVGINC-----T--------PPRFISGLILIIKKVTAKPILIYP 180 (247)
Q Consensus 117 v~is~~~~~~~~l~~G~~~~~~~~---~~~~~~~~~avG~NC-----~--------~p~~~~~~l~~l~~~~~~pl~vyP 180 (247)
+++-++..+. ...|.+++++++ .+.+ .+++.|.+-. . .+......++.+++..+.|+++
T Consensus 211 v~vrls~~~~--~~~g~~~~~~~~~a~~l~~-~g~d~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~iPvi~-- 285 (671)
T 1ps9_A 211 IIYRLSMLDL--VEDGGTFAETVELAQAIEA-AGATIINTGIGWHEARIPTIATPVPRGAFSWVTRKLKGHVSLPLVT-- 285 (671)
T ss_dssp EEEEEEEECC--STTCCCHHHHHHHHHHHHH-HTCSEEEEEECBTTCSSCSSSTTSCTTTTHHHHHHHTTSCSSCEEE--
T ss_pred EEEEECcccc--CCCCCCHHHHHHHHHHHHh-cCCCEEEcCCCccccccccccccCCcchHHHHHHHHHHhcCceEEE--
Confidence 9888886542 224666666544 4444 4788876521 0 0112356778888888899765
Q ss_pred CCC
Q 025860 181 NSG 183 (247)
Q Consensus 181 NaG 183 (247)
|.|
T Consensus 286 ~Gg 288 (671)
T 1ps9_A 286 TNR 288 (671)
T ss_dssp CSS
T ss_pred eCC
Confidence 444
No 205
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=76.08 E-value=42 Score=29.82 Aligned_cols=139 Identities=19% Similarity=0.176 Sum_probs=81.4
Q ss_pred HHHHHHHHHHhcCCCCEEEEec----------CCCHHHHHHHHHHHHhh------CCCCcEEEEEEEcCCCcccCCCcHH
Q 025860 73 DFHRRRVQVLVESAPDLIAFET----------IPNKIEAQAYAELLEEE------NIKIPAWFSFNSKDGVNVVSGDSLL 136 (247)
Q Consensus 73 ~~~~~q~~~l~~~gvD~i~~ET----------~~~~~E~~aa~~~~~~~------~~~~pv~is~~~~~~~~l~~G~~~~ 136 (247)
+.|.+.++.+. .++|.|-+-- +.+.+.+..+++.+++. ..++|+++-++..- +-+.+.
T Consensus 164 ~dy~~~~~~~~-~~ad~ielNisCPn~~G~~~l~~~~~l~~ll~av~~~~~~~~~~~~~Pv~vKi~p~~-----~~~~~~ 237 (367)
T 3zwt_A 164 EDYAEGVRVLG-PLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDGLRRVHRPAVLVKIAPDL-----TSQDKE 237 (367)
T ss_dssp HHHHHHHHHHG-GGCSEEEEECCCTTSTTGGGGGSHHHHHHHHHHHHHHHHTSCGGGCCEEEEEECSCC-----CHHHHH
T ss_pred HHHHHHHHHHh-hhCCEEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHhhccccCCceEEEEeCCCC-----CHHHHH
Confidence 34555666665 4689887752 22345556666666542 12689998875311 123456
Q ss_pred HHHHHHHhCCCCeEEEE-cCC-C------------------h---hHHHHHHHHHHhhc--CCCEEEEeCCCCccccccc
Q 025860 137 ECASIAESCKRVVSVGI-NCT-P------------------P---RFISGLILIIKKVT--AKPILIYPNSGEFYDADRK 191 (247)
Q Consensus 137 ~~~~~~~~~~~~~avG~-NC~-~------------------p---~~~~~~l~~l~~~~--~~pl~vyPNaG~~~d~~~~ 191 (247)
+.++.+.+ .++++|-+ |.+ + + ......+..+++.. +.||+ .|+|.
T Consensus 238 ~ia~~~~~-aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~~~ipvI--~~GGI------- 307 (367)
T 3zwt_A 238 DIASVVKE-LGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRVPII--GVGGV------- 307 (367)
T ss_dssp HHHHHHHH-HTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTTCSCEE--EESSC-------
T ss_pred HHHHHHHH-cCCCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHcCCCceEE--EECCC-------
Confidence 67777766 47887664 553 1 0 12346777777776 67754 44442
Q ss_pred ccccCCCCChHHHHHHHHHHHHcCCeEEeecCCC---ChHHHHHHHHHhh
Q 025860 192 EWVQNTGVSDEDFVSYVSKWCEVGASLVGGCCRT---TPNTIKGIYRTLS 238 (247)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~G~~iIGGCCGt---~P~hI~al~~~l~ 238 (247)
.++++ +.+.++.|++.|.-+-+. +|..++.|.+.+.
T Consensus 308 -------~s~~d----a~~~l~~GAd~V~vgra~l~~gP~~~~~i~~~l~ 346 (367)
T 3zwt_A 308 -------SSGQD----ALEKIRAGASLVQLYTALTFWGPPVVGKVKRELE 346 (367)
T ss_dssp -------CSHHH----HHHHHHHTCSEEEESHHHHHHCTHHHHHHHHHHH
T ss_pred -------CCHHH----HHHHHHcCCCEEEECHHHHhcCcHHHHHHHHHHH
Confidence 12333 334556788888766664 6888877776654
No 206
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=75.89 E-value=7.6 Score=33.80 Aligned_cols=99 Identities=7% Similarity=0.002 Sum_probs=60.2
Q ss_pred HHHHHhcCCCCEEEEec-CCC--------------HHHHHHHHHHHHhhCCCCcEEEEEEE----cCCCcccCCCcHHHH
Q 025860 78 RVQVLVESAPDLIAFET-IPN--------------KIEAQAYAELLEEENIKIPAWFSFNS----KDGVNVVSGDSLLEC 138 (247)
Q Consensus 78 q~~~l~~~gvD~i~~ET-~~~--------------~~E~~aa~~~~~~~~~~~pv~is~~~----~~~~~l~~G~~~~~~ 138 (247)
-++..+++|+|.|-+=. .++ ++.++.+++.+++.+ +.+-+.+.+ .+.++. +=+-+.+.
T Consensus 86 ~i~~a~~~g~~~v~i~~~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G--~~v~~~i~~~~~~~~~~~~-~~~~~~~~ 162 (307)
T 1ydo_A 86 GLENALEGGINEACVFMSASETHNRKNINKSTSESLHILKQVNNDAQKAN--LTTRAYLSTVFGCPYEKDV-PIEQVIRL 162 (307)
T ss_dssp HHHHHHHHTCSEEEEEEESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHTT--CEEEEEEECTTCBTTTBCC-CHHHHHHH
T ss_pred hHHHHHhCCcCEEEEEeecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCC--CEEEEEEEEEecCCcCCCC-CHHHHHHH
Confidence 35666678999885432 222 245567777888775 444433332 333322 22334445
Q ss_pred HHHHHhCCCCeEEEEcCC----ChhHHHHHHHHHHhhc-CCCEEEEe
Q 025860 139 ASIAESCKRVVSVGINCT----PPRFISGLILIIKKVT-AKPILIYP 180 (247)
Q Consensus 139 ~~~~~~~~~~~avG~NC~----~p~~~~~~l~~l~~~~-~~pl~vyP 180 (247)
++.+.+ .+++.|.+-=+ .|..+..+++.+++.. +.||.+..
T Consensus 163 ~~~~~~-~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~~~~~~l~~H~ 208 (307)
T 1ydo_A 163 SEALFE-FGISELSLGDTIGAANPAQVETVLEALLARFPANQIALHF 208 (307)
T ss_dssp HHHHHH-HTCSCEEEECSSCCCCHHHHHHHHHHHHTTSCGGGEEEEC
T ss_pred HHHHHh-cCCCEEEEcCCCCCcCHHHHHHHHHHHHHhCCCCeEEEEE
Confidence 555555 47887766532 4999999999998876 46787776
No 207
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=75.82 E-value=31 Score=30.58 Aligned_cols=81 Identities=9% Similarity=0.017 Sum_probs=57.8
Q ss_pred cCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEEcCC--ChhHH
Q 025860 84 ESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGINCT--PPRFI 161 (247)
Q Consensus 84 ~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~NC~--~p~~~ 161 (247)
+.|+.+| ....+.++....++.+++.+ ++|+.+.+-..+ .+.++.+.+ .+++.|=+|+. .+..+
T Consensus 68 ~GGlgii--~~~~s~e~~~~~I~~vk~~~-~~pvga~ig~~~----------~e~a~~l~e-aGad~I~ld~a~G~~~~~ 133 (361)
T 3khj_A 68 LGGIGII--HKNMDMESQVNEVLKVKNSG-GLRVGAAIGVNE----------IERAKLLVE-AGVDVIVLDSAHGHSLNI 133 (361)
T ss_dssp TTCEEEE--CSSSCHHHHHHHHHHHHHTT-CCCCEEEECTTC----------HHHHHHHHH-TTCSEEEECCSCCSBHHH
T ss_pred cCCCeEE--ecCCCHHHHHHHHHHHHhcc-CceEEEEeCCCH----------HHHHHHHHH-cCcCeEEEeCCCCCcHHH
Confidence 4566655 34567888887777777764 689888874321 555666666 58999999987 37777
Q ss_pred HHHHHHHHhhcCCCEEE
Q 025860 162 SGLILIIKKVTAKPILI 178 (247)
Q Consensus 162 ~~~l~~l~~~~~~pl~v 178 (247)
...++.+++..+.|+++
T Consensus 134 ~~~i~~i~~~~~~~Viv 150 (361)
T 3khj_A 134 IRTLKEIKSKMNIDVIV 150 (361)
T ss_dssp HHHHHHHHHHCCCEEEE
T ss_pred HHHHHHHHHhcCCcEEE
Confidence 78888888777888776
No 208
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=75.78 E-value=62 Score=31.58 Aligned_cols=159 Identities=11% Similarity=0.067 Sum_probs=85.3
Q ss_pred CHHHHHHHHHHHHHHHhcCCCCEEEEec-----------CCCHHHHHHHHHHHHhhCCCCcEEEEEEEcC-C--Cccc-C
Q 025860 67 TVETLKDFHRRRVQVLVESAPDLIAFET-----------IPNKIEAQAYAELLEEENIKIPAWFSFNSKD-G--VNVV-S 131 (247)
Q Consensus 67 s~~e~~~~~~~q~~~l~~~gvD~i~~ET-----------~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~-~--~~l~-~ 131 (247)
+.++... .++.|.+.|||+..+|. +.+-.+-..+.+ +++..++.++ ++-+.. + +.+. .
T Consensus 123 ~~edkl~----Ia~~Ld~~Gvg~~~IE~gGGatfd~~~~f~~e~p~e~l~~-l~~~~~~~~l--~~l~R~~n~vgy~~~p 195 (718)
T 3bg3_A 123 RTHDLKK----IAPYVAHNFSKLFSMENWGGATFDVAMRFLYECPWRRLQE-LRELIPNIPF--QMLLRGANAVGYTNYP 195 (718)
T ss_dssp CHHHHHH----HHHHHHHHCTTCSEEEEEETTHHHHHHHTSCCCHHHHHHH-HHHHCSSSCE--EEEECGGGTTSSSCCC
T ss_pred CHHHHHH----HHHHHHHhcCCCcEEEecCCcchhhccccCCCCHHHHHHH-HHHHcccchH--HHHhcccccccccccC
Confidence 4455544 56667778899988895 343333333222 3332224443 222221 0 1110 1
Q ss_pred CCcHHHHHHHHHhCCCCeEEEEcCC--ChhHHHHHHHHHHhhcCCCEEEEeC-CCCcccccccccccCCCCChHHHHHHH
Q 025860 132 GDSLLECASIAESCKRVVSVGINCT--PPRFISGLILIIKKVTAKPILIYPN-SGEFYDADRKEWVQNTGVSDEDFVSYV 208 (247)
Q Consensus 132 G~~~~~~~~~~~~~~~~~avG~NC~--~p~~~~~~l~~l~~~~~~pl~vyPN-aG~~~d~~~~~~~~~~~~~~~~~~~~~ 208 (247)
+.-...-++.+.+ .+++.|.+..+ +.+.+...++.+++. ...+.++-. .+.+.|+. . ...+++.+.+.+
T Consensus 196 ~~~~~~~i~~a~~-~Gvd~irIf~s~n~l~~l~~~i~~ak~~-G~~v~~~i~~~~d~~dp~----r--~~~~~e~~~~~a 267 (718)
T 3bg3_A 196 DNVVFKFCEVAKE-NGMDVFRVFDSLNYLPNMLLGMEAAGSA-GGVVEAAISYTGDVADPS----R--TKYSLQYYMGLA 267 (718)
T ss_dssp HHHHHHHHHHHHH-HTCCEEEEECSSCCHHHHHHHHHHHHTT-TSEEEEEEECCSCTTCTT----C--CTTCHHHHHHHH
T ss_pred CcchHHHHHHHHh-cCcCEEEEEecHHHHHHHHHHHHHHHHc-CCeEEEEEEeeccccCCC----C--CCCCHHHHHHHH
Confidence 1112344444444 37787777664 556666666666543 222222111 11111211 1 113688899999
Q ss_pred HHHHHcCCeEEeecC---CCChHHHHHHHHHhhCC
Q 025860 209 SKWCEVGASLVGGCC---RTTPNTIKGIYRTLSNR 240 (247)
Q Consensus 209 ~~~~~~G~~iIGGCC---Gt~P~hI~al~~~l~~~ 240 (247)
+...+.|+..|.=|= ..+|..+..|-+.|+..
T Consensus 268 ~~l~~~Ga~~I~l~DT~G~~~P~~v~~lV~~lk~~ 302 (718)
T 3bg3_A 268 EELVRAGTHILCIKDMAGLLKPTACTMLVSSLRDR 302 (718)
T ss_dssp HHHHHHTCSEEEEECTTSCCCHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCEEEEcCcCCCcCHHHHHHHHHHHHHh
Confidence 999999999988663 35799998887777654
No 209
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=75.74 E-value=25 Score=30.50 Aligned_cols=156 Identities=12% Similarity=0.098 Sum_probs=70.9
Q ss_pred CeEEEEecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCEEEEec---------CCCHHHHHHHHHHH
Q 025860 38 PILVAASVGSYGAYLADGSEYSGNYGDAITVETLKDFHRRRVQVLVESAPDLIAFET---------IPNKIEAQAYAELL 108 (247)
Q Consensus 38 ~~~VaGsiGP~g~~l~~g~eY~g~y~~~~s~~e~~~~~~~q~~~l~~~gvD~i~~ET---------~~~~~E~~aa~~~~ 108 (247)
+.+|-|-+-=+-.++.||..|. +.+.+.+ +++.+++.|+|+|=+-- ++.-+|++-++.++
T Consensus 28 ~~~iMGIlNvTPDSFsdgg~~~-------~~~~a~~----~a~~~v~~GAdIIDIGgeSTrPga~~v~~~eE~~Rv~pvI 96 (294)
T 2dqw_A 28 RVRLLGVLNLTPDSFSDGGRYL-------DPERALE----RAREMVAEGADILDLGAESTRPGAAPVPVEEEKRRLLPVL 96 (294)
T ss_dssp SCEEEEEEECCC--------------------CCHH----HHHHHHHHTCSEEEEECC-----------CCHHHHHHHHH
T ss_pred CceEEEEEeCCCCCCCCCCCCC-------CHHHHHH----HHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHH
Confidence 4578887776767777776542 2334443 56667789999996554 23356666666555
Q ss_pred HhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEEcCCChhHHHHHHHHHHhhcCCCEEEEeCC-CCccc
Q 025860 109 EEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGINCTPPRFISGLILIIKKVTAKPILIYPNS-GEFYD 187 (247)
Q Consensus 109 ~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~NC~~p~~~~~~l~~l~~~~~~pl~vyPNa-G~~~d 187 (247)
+.... ..+.+|+...+ .++++...+. |++ -||=........+++..++ .+.|+++.++. |.+.+
T Consensus 97 ~~l~~-~~vpiSIDT~~----------~~Va~aAl~a-Ga~--iINdVsg~~d~~m~~v~a~-~~~~vVlmh~~eG~p~t 161 (294)
T 2dqw_A 97 EAVLS-LGVPVSVDTRK----------PEVAEEALKL-GAH--LLNDVTGLRDERMVALAAR-HGVAAVVMHMPVPDPAT 161 (294)
T ss_dssp HHHHT-TCSCEEEECSC----------HHHHHHHHHH-TCS--EEECSSCSCCHHHHHHHHH-HTCEEEEECCSSSCTTT
T ss_pred HHHHh-CCCeEEEECCC----------HHHHHHHHHh-CCC--EEEECCCCCChHHHHHHHH-hCCCEEEEcCCCCCCcc
Confidence 54321 14445664321 2333333332 455 3565321122233333333 37899999987 65432
Q ss_pred ccc-cccccCCCCChHHHHHHHHHHHHcCC-eEE
Q 025860 188 ADR-KEWVQNTGVSDEDFVSYVSKWCEVGA-SLV 219 (247)
Q Consensus 188 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~G~-~iI 219 (247)
... ..|..--..--+.+.+.+....+.|+ +||
T Consensus 162 m~~~~~y~dv~~ev~~~l~~~i~~a~~~Gi~~Ii 195 (294)
T 2dqw_A 162 MMAHARYRDVVAEVKAFLEAQARRALSAGVPQVV 195 (294)
T ss_dssp GGGGCCCSSHHHHHHHHHHHHHHHHHHTTCSCEE
T ss_pred ccccCccccHHHHHHHHHHHHHHHHHHCCCCcEE
Confidence 110 11110000001235555667777886 344
No 210
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=75.49 E-value=37 Score=28.85 Aligned_cols=151 Identities=10% Similarity=0.069 Sum_probs=82.3
Q ss_pred CCHHHHHHHHHHHHHHHhcCCCCEEEEecCCCHH------HHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHH
Q 025860 66 ITVETLKDFHRRRVQVLVESAPDLIAFETIPNKI------EAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECA 139 (247)
Q Consensus 66 ~s~~e~~~~~~~q~~~l~~~gvD~i~~ET~~~~~------E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~ 139 (247)
.+.++... .++.|.+.|+|.|.+=++.+.+ +...+++.+++. .+.|+.+ + + . ....+
T Consensus 23 ~~~e~k~~----i~~~L~~~Gv~~IE~g~~~~~~~~p~~~~~~e~~~~i~~~-~~~~v~~-l-~-~--------n~~~i- 85 (295)
T 1ydn_A 23 VPTADKIA----LINRLSDCGYARIEATSFVSPKWVPQLADSREVMAGIRRA-DGVRYSV-L-V-P--------NMKGY- 85 (295)
T ss_dssp CCHHHHHH----HHHHHTTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCC-SSSEEEE-E-C-S--------SHHHH-
T ss_pred cCHHHHHH----HHHHHHHcCcCEEEEccCcCccccccccCHHHHHHHHHhC-CCCEEEE-E-e-C--------CHHHH-
Confidence 57777666 6777888999999775543332 334444444443 2445432 1 1 1 23333
Q ss_pred HHHHhCCCCeEEEEc-------------CCChhHHH---HHHHHHHhhcCCCEEEEeCCCCcccccccccccCCCCChHH
Q 025860 140 SIAESCKRVVSVGIN-------------CTPPRFIS---GLILIIKKVTAKPILIYPNSGEFYDADRKEWVQNTGVSDED 203 (247)
Q Consensus 140 ~~~~~~~~~~avG~N-------------C~~p~~~~---~~l~~l~~~~~~pl~vyPNaG~~~d~~~~~~~~~~~~~~~~ 203 (247)
+.+.+ .+++.|.+- |+-.+.+. +.++..++ ....+ ..+-+..+... +.. ..+|++
T Consensus 86 ~~a~~-~G~~~V~i~~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~-~G~~V--~~~l~~~~~~e---~~~--~~~~~~ 156 (295)
T 1ydn_A 86 EAAAA-AHADEIAVFISASEGFSKANINCTIAESIERLSPVIGAAIN-DGLAI--RGYVSCVVECP---YDG--PVTPQA 156 (295)
T ss_dssp HHHHH-TTCSEEEEEEESCHHHHHHHTSSCHHHHHHHHHHHHHHHHH-TTCEE--EEEEECSSEET---TTE--ECCHHH
T ss_pred HHHHH-CCCCEEEEEEecCHHHHHHHcCCCHHHHHHHHHHHHHHHHH-cCCeE--EEEEEEEecCC---cCC--CCCHHH
Confidence 33434 367766664 33222222 22333332 24443 33322211110 001 146888
Q ss_pred HHHHHHHHHHcCCeEEeec--CC-CChHHHHHHHHHhhCCCC
Q 025860 204 FVSYVSKWCEVGASLVGGC--CR-TTPNTIKGIYRTLSNRSS 242 (247)
Q Consensus 204 ~~~~~~~~~~~G~~iIGGC--CG-t~P~hI~al~~~l~~~~~ 242 (247)
+.++++...+.|+..|.=| -| .+|+.+..+-+.+.+..|
T Consensus 157 ~~~~~~~~~~~G~d~i~l~Dt~G~~~P~~~~~lv~~l~~~~~ 198 (295)
T 1ydn_A 157 VASVTEQLFSLGCHEVSLGDTIGRGTPDTVAAMLDAVLAIAP 198 (295)
T ss_dssp HHHHHHHHHHHTCSEEEEEETTSCCCHHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHhcCCCEEEecCCCCCcCHHHHHHHHHHHHHhCC
Confidence 9999999999999886533 22 589999998888876554
No 211
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=75.39 E-value=19 Score=36.36 Aligned_cols=68 Identities=12% Similarity=0.124 Sum_probs=45.7
Q ss_pred HHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEEcCCCh----------------hHHHHHHHHHHh
Q 025860 107 LLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGINCTPP----------------RFISGLILIIKK 170 (247)
Q Consensus 107 ~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~NC~~p----------------~~~~~~l~~l~~ 170 (247)
.+++..++.|+++++-+.. +-+.+.++++.+.+ .++++|-+|++.| +.+.++++.+++
T Consensus 627 ~~~~~~~~~~~i~~i~~g~-----~~~~~~~~a~~~~~-~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~ 700 (1025)
T 1gte_A 627 ELKADFPDNIVIASIMCSY-----NKNDWMELSRKAEA-SGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQ 700 (1025)
T ss_dssp HHHHHCTTSEEEEEECCCS-----CHHHHHHHHHHHHH-TTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHHH
T ss_pred HHHhcCCCCCeEEEecCCC-----CHHHHHHHHHHHHh-cCCCEEEEECCCCCCCCCCCcccccccCHHHHHHHHHHHHH
Confidence 3444333689998884311 11345566766665 5899999998643 446778888888
Q ss_pred hcCCCEEEEe
Q 025860 171 VTAKPILIYP 180 (247)
Q Consensus 171 ~~~~pl~vyP 180 (247)
..+.||++.-
T Consensus 701 ~~~~Pv~vK~ 710 (1025)
T 1gte_A 701 AVQIPFFAKL 710 (1025)
T ss_dssp HCSSCEEEEE
T ss_pred hhCCceEEEe
Confidence 8899998865
No 212
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=75.12 E-value=18 Score=31.00 Aligned_cols=98 Identities=16% Similarity=0.152 Sum_probs=58.3
Q ss_pred ccCCCcHHHHHHHHHhCCCCeEEEEcCCChhHHHHHHHHHHhh-cCCCEEE--EeCCCCcccc----------cccc-cc
Q 025860 129 VVSGDSLLECASIAESCKRVVSVGINCTPPRFISGLILIIKKV-TAKPILI--YPNSGEFYDA----------DRKE-WV 194 (247)
Q Consensus 129 l~~G~~~~~~~~~~~~~~~~~avG~NC~~p~~~~~~l~~l~~~-~~~pl~v--yPNaG~~~d~----------~~~~-~~ 194 (247)
+.||..+.++...... .| ...+.+..+++.+++. .+.|+++ |-|.-..|.. .-.. ..
T Consensus 61 ~aDGpvIq~a~~rAL~-~G--------~~~~~~~~~v~~~r~~~~~~Pivlm~Y~n~v~~~g~~~f~~~~~~aGvdGvIi 131 (271)
T 3nav_A 61 LADGPTIQGANLRALA-AK--------TTPDICFELIAQIRARNPETPIGLLMYANLVYARGIDDFYQRCQKAGVDSVLI 131 (271)
T ss_dssp GGCCSHHHHHHHHHHH-TT--------CCHHHHHHHHHHHHHHCTTSCEEEEECHHHHHHTCHHHHHHHHHHHTCCEEEE
T ss_pred CCCCHHHHHHHHHHHH-cC--------CCHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHhHHHHHHHHHHCCCCEEEE
Confidence 4588888877766554 23 3466777888888876 6788754 7674111100 0000 11
Q ss_pred cCCCCChHHHHHHHHHHHHcCCeEEeecCCCC-hHHHHHHHHHh
Q 025860 195 QNTGVSDEDFVSYVSKWCEVGASLVGGCCRTT-PNTIKGIYRTL 237 (247)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~G~~iIGGCCGt~-P~hI~al~~~l 237 (247)
+ ++.+++..++.....+.|...|==|.-++ ++.|+.+.+.-
T Consensus 132 p--Dlp~ee~~~~~~~~~~~gl~~I~lvap~t~~eri~~i~~~~ 173 (271)
T 3nav_A 132 A--DVPTNESQPFVAAAEKFGIQPIFIAPPTASDETLRAVAQLG 173 (271)
T ss_dssp T--TSCGGGCHHHHHHHHHTTCEEEEEECTTCCHHHHHHHHHHC
T ss_pred C--CCCHHHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHHC
Confidence 1 24556666666667777887777777655 46777776553
No 213
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=75.11 E-value=5.1 Score=35.08 Aligned_cols=62 Identities=16% Similarity=0.263 Sum_probs=41.4
Q ss_pred HHHHHhcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEEcC
Q 025860 78 RVQVLVESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGINC 155 (247)
Q Consensus 78 q~~~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~NC 155 (247)
+++..+++|+|+|.+.+|+ +.+++.+++.++. +. .+..+ .|.+++.+.+.. + .|+|.|.+-.
T Consensus 219 e~~eAl~aGaDiImLDn~s-~~~l~~av~~~~~---~v--~leaS--------GGIt~~~i~~~A-~-tGVD~IsvGa 280 (300)
T 3l0g_A 219 QVEESLSNNVDMILLDNMS-ISEIKKAVDIVNG---KS--VLEVS--------GCVNIRNVRNIA-L-TGVDYISIGC 280 (300)
T ss_dssp HHHHHHHTTCSEEEEESCC-HHHHHHHHHHHTT---SS--EEEEE--------SSCCTTTHHHHH-T-TTCSEEECGG
T ss_pred HHHHHHHcCCCEEEECCCC-HHHHHHHHHhhcC---ce--EEEEE--------CCCCHHHHHHHH-H-cCCCEEEeCc
Confidence 3343455899999999976 6899988887663 22 22222 355666665543 4 5899998766
No 214
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=74.92 E-value=5.2 Score=34.80 Aligned_cols=61 Identities=10% Similarity=0.137 Sum_probs=40.2
Q ss_pred HHHHHhcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEEc
Q 025860 78 RVQVLVESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGIN 154 (247)
Q Consensus 78 q~~~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~N 154 (247)
+++..+++|+|.|.+.+++ +.+++.+++.++. +.++.+| .|.+++.+.+.. + .|+|.|++-
T Consensus 210 ea~eAl~aGaD~I~LDn~~-~~~l~~av~~~~~---~v~ieaS----------GGIt~~~i~~~a-~-tGVD~IsvG 270 (287)
T 3tqv_A 210 ELNQAIAAKADIVMLDNFS-GEDIDIAVSIARG---KVALEVS----------GNIDRNSIVAIA-K-TGVDFISVG 270 (287)
T ss_dssp HHHHHHHTTCSEEEEESCC-HHHHHHHHHHHTT---TCEEEEE----------SSCCTTTHHHHH-T-TTCSEEECS
T ss_pred HHHHHHHcCCCEEEEcCCC-HHHHHHHHHhhcC---CceEEEE----------CCCCHHHHHHHH-H-cCCCEEEEC
Confidence 3333455899999999976 7888888887652 3444433 355556555533 4 589988874
No 215
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=74.86 E-value=32 Score=30.51 Aligned_cols=97 Identities=4% Similarity=-0.023 Sum_probs=57.0
Q ss_pred HHHHHHHHHhCCCCeEEEEcCCC---------h-----------------hHHHHHHHHHHhhcC-CCEEEEeCCCCccc
Q 025860 135 LLECASIAESCKRVVSVGINCTP---------P-----------------RFISGLILIIKKVTA-KPILIYPNSGEFYD 187 (247)
Q Consensus 135 ~~~~~~~~~~~~~~~avG~NC~~---------p-----------------~~~~~~l~~l~~~~~-~pl~vyPNaG~~~d 187 (247)
+.++++.+.+ .++|+|=|||.+ | ..+.++++.+++... .||++.-+....+.
T Consensus 163 f~~aA~~a~~-aGfDgVeih~a~gYLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~pv~vris~~~~~~ 241 (365)
T 2gou_A 163 YRQAALNAME-AGFDGIELHAANGYLINQFIDSEANNRSDEYGGSLENRLRFLDEVVAALVDAIGAERVGVRLAPLTTLN 241 (365)
T ss_dssp HHHHHHHHHH-TTCSEEEEECCTTSHHHHHHSGGGCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECSSCCTT
T ss_pred HHHHHHHHHH-cCCCEEEEecccchhHhhccCCCccCcCcccCcchhhhHHHHHHHHHHHHHHcCCCcEEEEEccccccC
Confidence 3455555555 589999999964 2 135566777777653 29999776632111
Q ss_pred ccccccccCCCCChHHHHHHHHHHHHcCCeEEeecCCC---C----hHHHHHHHHHhh
Q 025860 188 ADRKEWVQNTGVSDEDFVSYVSKWCEVGASLVGGCCRT---T----PNTIKGIYRTLS 238 (247)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~iIGGCCGt---~----P~hI~al~~~l~ 238 (247)
+.. ...+.+++.+.++.+.+.|+.+|-=-.++ . .+.++.+++.++
T Consensus 242 ~~~------~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~~~~~~~~i~~~~~ 293 (365)
T 2gou_A 242 GTV------DADPILTYTAAAALLNKHRIVYLHIAEVDWDDAPDTPVSFKRALREAYQ 293 (365)
T ss_dssp SCC------CSSHHHHHHHHHHHHHHTTCSEEEEECCBTTBCCCCCHHHHHHHHHHCC
T ss_pred CCC------CCCCHHHHHHHHHHHHHcCCCEEEEeCCCcCCCCCccHHHHHHHHHHCC
Confidence 100 01235667777788888887776533332 1 245666766653
No 216
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=74.78 E-value=17 Score=29.52 Aligned_cols=85 Identities=14% Similarity=0.130 Sum_probs=49.9
Q ss_pred HHHHHHHhcCCCCEEEEe-----cCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeE
Q 025860 76 RRRVQVLVESAPDLIAFE-----TIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVS 150 (247)
Q Consensus 76 ~~q~~~l~~~gvD~i~~E-----T~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~a 150 (247)
.+.++.+.++|+|+|=+= .++++......++.+++.. +.|+.+-+.+++ ..+.++.+.+ .+++.
T Consensus 26 ~~~i~~~~~~G~d~i~l~~~dg~f~~~~~~~~~~i~~l~~~~-~~~~~v~l~vnd---------~~~~v~~~~~-~Gad~ 94 (230)
T 1rpx_A 26 GEQVKAIEQAGCDWIHVDVMDGRFVPNITIGPLVVDSLRPIT-DLPLDVHLMIVE---------PDQRVPDFIK-AGADI 94 (230)
T ss_dssp HHHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHGGGC-CSCEEEEEESSS---------HHHHHHHHHH-TTCSE
T ss_pred HHHHHHHHHCCCCEEEEeeccCCcccccccCHHHHHHHHhcc-CCcEEEEEEecC---------HHHHHHHHHH-cCCCE
Confidence 346777888999988553 2343322223344455543 578887776543 3345555555 57888
Q ss_pred EEEcCC--ChhHHHHHHHHHHhh
Q 025860 151 VGINCT--PPRFISGLILIIKKV 171 (247)
Q Consensus 151 vG~NC~--~p~~~~~~l~~l~~~ 171 (247)
|-+-.. .++.....++.+++.
T Consensus 95 v~vh~~~~~~~~~~~~~~~~~~~ 117 (230)
T 1rpx_A 95 VSVHCEQSSTIHLHRTINQIKSL 117 (230)
T ss_dssp EEEECSTTTCSCHHHHHHHHHHT
T ss_pred EEEEecCccchhHHHHHHHHHHc
Confidence 876666 444555666666543
No 217
>1u1j_A 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; methionine, synthase, methyltetrahydrofolate; HET: C2F; 2.40A {Arabidopsis thaliana} SCOP: c.1.22.2 c.1.22.2 PDB: 1u1h_A* 1u1u_A 1u22_A*
Probab=74.41 E-value=23 Score=34.87 Aligned_cols=133 Identities=14% Similarity=0.159 Sum_probs=78.8
Q ss_pred HHHHHHHHHHHHHHHhcCCCCEEEE-ecC----CCHHHHHHHHHHHHhhC---CCCcEEEEEEEcCCCcccCCCcHH-HH
Q 025860 68 VETLKDFHRRRVQVLVESAPDLIAF-ETI----PNKIEAQAYAELLEEEN---IKIPAWFSFNSKDGVNVVSGDSLL-EC 138 (247)
Q Consensus 68 ~~e~~~~~~~q~~~l~~~gvD~i~~-ET~----~~~~E~~aa~~~~~~~~---~~~pv~is~~~~~~~~l~~G~~~~-~~ 138 (247)
.+.+...|.+.++.|.++|++.|-| |.. .+.+...++-.+++... .+.++++...+ | ++. +.
T Consensus 181 l~~L~~~y~~~l~~L~~aG~~~VQiDEP~L~~~l~~~~~~~~~~a~~~l~~~~~~~~i~lhtc~--------G-~~~~~~ 251 (765)
T 1u1j_A 181 LPKILPIYKEVITELKAAGATWIQLDEPVLVMDLEGQKLQAFTGAYAELESTLSGLNVLVETYF--------A-DIPAEA 251 (765)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEEEECGGGGSCCCHHHHHHHHHHHHHSTTTTCSSEEEEECCS--------S-CCCHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEcCCccccCCCHHHHHHHHHHHHHHHhhcCCCeEEEEeCC--------C-CcchHH
Confidence 4789999999999999999998754 322 12222233334444441 14555544433 2 223 55
Q ss_pred HHHHHhCCC-CeEEEEcCC-ChhHHHHHHHHHHhhc--CCC--EEEEeCCCCcccccccccccCCCCChHHHHHHHHHHH
Q 025860 139 ASIAESCKR-VVSVGINCT-PPRFISGLILIIKKVT--AKP--ILIYPNSGEFYDADRKEWVQNTGVSDEDFVSYVSKWC 212 (247)
Q Consensus 139 ~~~~~~~~~-~~avG~NC~-~p~~~~~~l~~l~~~~--~~p--l~vyPNaG~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (247)
+..+.+ .+ +++|++-+. .++.+ +.+.... ++- +++-+ + .+.|. .+++...+.+++..
T Consensus 252 ~~~l~~-l~~vd~l~lD~v~~~~~l----~~l~~~l~~~k~L~lGvVd-------g-rni~~----~d~e~v~~~l~~~~ 314 (765)
T 1u1j_A 252 YKTLTS-LKGVTAFGFDLVRGTKTL----DLVKAGFPEGKYLFAGVVD-------G-RNIWA----NDFAASLSTLQALE 314 (765)
T ss_dssp HHHHTT-CTTCCEEEEESSSCTTHH----HHHHHCCCSSCEEEEEEEC-------S-SSCBC----CCHHHHHHHHHHHH
T ss_pred HHHHHc-CCCCcEEEEEecCCcccH----HHHHHhcCCCCEEEEEeeC-------C-cccCC----CCHHHHHHHHHHHH
Confidence 666665 57 999999997 45433 3333211 221 23332 2 23564 35788887777776
Q ss_pred Hc-CCe--EEeecCCCC
Q 025860 213 EV-GAS--LVGGCCRTT 226 (247)
Q Consensus 213 ~~-G~~--iIGGCCGt~ 226 (247)
+. |.. +|+--||..
T Consensus 315 ~~lg~~~l~lspsCgL~ 331 (765)
T 1u1j_A 315 GIVGKDKLVVSTSCSLL 331 (765)
T ss_dssp HHCCSSCEEEEESSCGG
T ss_pred HhcCCCcEEEcCCCCcc
Confidence 53 755 899999876
No 218
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=73.94 E-value=5.4 Score=34.22 Aligned_cols=58 Identities=14% Similarity=0.155 Sum_probs=38.5
Q ss_pred hcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEE
Q 025860 83 VESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGI 153 (247)
Q Consensus 83 ~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~ 153 (247)
.++|+|+|.+-|++ +.+++.+++.++...++.|+.+| .|.+++.+.+.+ + .|++.||+
T Consensus 199 ~~aGaD~I~ld~~~-~~~l~~~v~~l~~~~~~~~i~As----------GGI~~~ni~~~~-~-aGaD~i~v 256 (273)
T 2b7n_A 199 MNAGADIVMCDNLS-VLETKEIAAYRDAHYPFVLLEAS----------GNISLESINAYA-K-SGVDAISV 256 (273)
T ss_dssp HHHTCSEEEEETCC-HHHHHHHHHHHHHHCTTCEEEEE----------SSCCTTTHHHHH-T-TTCSEEEC
T ss_pred HHcCCCEEEECCCC-HHHHHHHHHHhhccCCCcEEEEE----------CCCCHHHHHHHH-H-cCCcEEEE
Confidence 34689999999964 88888888877653234566544 355555555544 3 47888887
No 219
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=73.89 E-value=31 Score=27.28 Aligned_cols=109 Identities=11% Similarity=0.069 Sum_probs=60.6
Q ss_pred HHHHhcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEEcCC--
Q 025860 79 VQVLVESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGINCT-- 156 (247)
Q Consensus 79 ~~~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~NC~-- 156 (247)
++.+.+.|+|++.+=-.+...+++.+++.+++.+ .++.+++. +=+++.+.++.+.+ .+++.|++--+
T Consensus 70 ~~~a~~~Gad~v~vh~~~~~~~~~~~~~~~~~~g--~~~gv~~~--------s~~~p~~~~~~~~~-~g~d~v~~~~~~~ 138 (207)
T 3ajx_A 70 ADIAFKAGADLVTVLGSADDSTIAGAVKAAQAHN--KGVVVDLI--------GIEDKATRAQEVRA-LGAKFVEMHAGLD 138 (207)
T ss_dssp HHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHHT--CEEEEECT--------TCSSHHHHHHHHHH-TTCSEEEEECCHH
T ss_pred HHHHHhCCCCEEEEeccCChHHHHHHHHHHHHcC--CceEEEEe--------cCCChHHHHHHHHH-hCCCEEEEEeccc
Confidence 3556779999998766566567778888888764 55544441 11234444444444 36788855322
Q ss_pred ----ChhHHHHHHHHHHhhcCCCEEEEeCCCCcccccccccccCCCCChHHHHHHHHHHHHcCCeEEe
Q 025860 157 ----PPRFISGLILIIKKVTAKPILIYPNSGEFYDADRKEWVQNTGVSDEDFVSYVSKWCEVGASLVG 220 (247)
Q Consensus 157 ----~p~~~~~~l~~l~~~~~~pl~vyPNaG~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~iIG 220 (247)
+.....+.++.+... +.|+++-+.- +++ .+.+|++.|+..|.
T Consensus 139 ~~~~g~~~~~~~i~~~~~~-~~pi~v~GGI-----------------~~~----~~~~~~~aGad~vv 184 (207)
T 3ajx_A 139 EQAKPGFDLNGLLAAGEKA-RVPFSVAGGV-----------------KVA----TIPAVQKAGAEVAV 184 (207)
T ss_dssp HHTSTTCCTHHHHHHHHHH-TSCEEEESSC-----------------CGG----GHHHHHHTTCSEEE
T ss_pred ccccCCCchHHHHHHhhCC-CCCEEEECCc-----------------CHH----HHHHHHHcCCCEEE
Confidence 111111444444432 5777665522 122 34557778887665
No 220
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=73.89 E-value=35 Score=29.39 Aligned_cols=84 Identities=10% Similarity=0.022 Sum_probs=49.0
Q ss_pred HHHHHHHhcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEEcC
Q 025860 76 RRRVQVLVESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGINC 155 (247)
Q Consensus 76 ~~q~~~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~NC 155 (247)
.++++.+.+.|+|++.+=- .+. ...++.+++. ++|++.++ .+..++... .+ .++++|.+..
T Consensus 86 ~~~~~~~~~~g~d~V~~~~-g~p---~~~~~~l~~~--gi~vi~~v-----------~t~~~a~~~-~~-~GaD~i~v~g 146 (328)
T 2gjl_A 86 AEYRAAIIEAGIRVVETAG-NDP---GEHIAEFRRH--GVKVIHKC-----------TAVRHALKA-ER-LGVDAVSIDG 146 (328)
T ss_dssp HHHHHHHHHTTCCEEEEEE-SCC---HHHHHHHHHT--TCEEEEEE-----------SSHHHHHHH-HH-TTCSEEEEEC
T ss_pred HHHHHHHHhcCCCEEEEcC-CCc---HHHHHHHHHc--CCCEEeeC-----------CCHHHHHHH-HH-cCCCEEEEEC
Confidence 3467777788999887642 222 2344556665 57888554 134555443 33 4788887733
Q ss_pred ---C---Ch--hHHHHHHHHHHhhcCCCEEE
Q 025860 156 ---T---PP--RFISGLILIIKKVTAKPILI 178 (247)
Q Consensus 156 ---~---~p--~~~~~~l~~l~~~~~~pl~v 178 (247)
. +. .....+++++++..+.|+++
T Consensus 147 ~~~GG~~G~~~~~~~~~l~~v~~~~~iPvia 177 (328)
T 2gjl_A 147 FECAGHPGEDDIPGLVLLPAAANRLRVPIIA 177 (328)
T ss_dssp TTCSBCCCSSCCCHHHHHHHHHTTCCSCEEE
T ss_pred CCCCcCCCCccccHHHHHHHHHHhcCCCEEE
Confidence 1 11 13446777777766778543
No 221
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=73.58 E-value=43 Score=28.69 Aligned_cols=151 Identities=10% Similarity=0.036 Sum_probs=82.1
Q ss_pred CCHHHHHHHHHHHHHHHhcCCCCEEEEec------CCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHH
Q 025860 66 ITVETLKDFHRRRVQVLVESAPDLIAFET------IPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECA 139 (247)
Q Consensus 66 ~s~~e~~~~~~~q~~~l~~~gvD~i~~ET------~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~ 139 (247)
.+.++... .++.|.+.|+|.|-+=. ++.+.+...+++.+.+. .+.|+.+-. . ...++-
T Consensus 27 ~~~e~k~~----i~~~L~~~Gv~~IE~g~~~~~~~~~~~~d~~~~~~~~~~~-~~~~~~~l~--~---------~~~~i~ 90 (302)
T 2ftp_A 27 IEVADKIR----LVDDLSAAGLDYIEVGSFVSPKWVPQMAGSAEVFAGIRQR-PGVTYAALA--P---------NLKGFE 90 (302)
T ss_dssp CCHHHHHH----HHHHHHHTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCC-TTSEEEEEC--C---------SHHHHH
T ss_pred CCHHHHHH----HHHHHHHcCcCEEEECCCcCccccccccCHHHHHHHhhhc-CCCEEEEEe--C---------CHHHHH
Confidence 57777666 66667789999996643 22223334444444433 245554322 1 223333
Q ss_pred HHHHhCCCCeEEEE-cCCChh---------------HHHHHHHHHHhhcCCCEEEEeCCCCcccccccccccCCCCChHH
Q 025860 140 SIAESCKRVVSVGI-NCTPPR---------------FISGLILIIKKVTAKPILIYPNSGEFYDADRKEWVQNTGVSDED 203 (247)
Q Consensus 140 ~~~~~~~~~~avG~-NC~~p~---------------~~~~~l~~l~~~~~~pl~vyPNaG~~~d~~~~~~~~~~~~~~~~ 203 (247)
. ..+ .+++.|.+ ..+++. .+.+.++..++. ... |..+-+..+... +.. ..+|++
T Consensus 91 ~-a~~-aG~~~v~i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~-G~~--V~~~l~~~~~~e---~~~--~~~~~~ 160 (302)
T 2ftp_A 91 A-ALE-SGVKEVAVFAAASEAFSQRNINCSIKDSLERFVPVLEAARQH-QVR--VRGYISCVLGCP---YDG--DVDPRQ 160 (302)
T ss_dssp H-HHH-TTCCEEEEEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHT-TCE--EEEEEECTTCBT---TTB--CCCHHH
T ss_pred H-HHh-CCcCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHC-CCe--EEEEEEEEeeCC---cCC--CCCHHH
Confidence 3 333 37777776 333332 123333333322 333 333333222211 011 256888
Q ss_pred HHHHHHHHHHcCCeEEeec--C-CCChHHHHHHHHHhhCCCC
Q 025860 204 FVSYVSKWCEVGASLVGGC--C-RTTPNTIKGIYRTLSNRSS 242 (247)
Q Consensus 204 ~~~~~~~~~~~G~~iIGGC--C-Gt~P~hI~al~~~l~~~~~ 242 (247)
+.++++...+.|+..|.=| = ..+|..+..+-+.+++..|
T Consensus 161 ~~~~~~~~~~~G~d~i~l~DT~G~~~P~~~~~lv~~l~~~~~ 202 (302)
T 2ftp_A 161 VAWVARELQQMGCYEVSLGDTIGVGTAGATRRLIEAVASEVP 202 (302)
T ss_dssp HHHHHHHHHHTTCSEEEEEESSSCCCHHHHHHHHHHHTTTSC
T ss_pred HHHHHHHHHHcCCCEEEEeCCCCCcCHHHHHHHHHHHHHhCC
Confidence 9999999999999887533 1 1589999998888876554
No 222
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=73.55 E-value=41 Score=28.95 Aligned_cols=93 Identities=10% Similarity=-0.020 Sum_probs=58.8
Q ss_pred HHHHhcCC-CCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEEcCCC
Q 025860 79 VQVLVESA-PDLIAFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGINCTP 157 (247)
Q Consensus 79 ~~~l~~~g-vD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~NC~~ 157 (247)
+.+..++| +.++..+++++.++++..++.+++.. +.|+-+.+.+... + .-..+.+.++.+.+ .++++|-++...
T Consensus 32 a~av~~aGglG~i~~~~~~s~~~l~~~i~~i~~~~-~~p~~v~l~v~~~--~-~~~~~~~~~~~~~~-~g~d~V~~~~g~ 106 (328)
T 2gjl_A 32 AAAVANAGGLATLSALTQPSPEALAAEIARCRELT-DRPFGVNLTLLPT--Q-KPVPYAEYRAAIIE-AGIRVVETAGND 106 (328)
T ss_dssp HHHHHHTTSBCEEETTTSSSHHHHHHHHHHHHHHC-SSCCEEEEEECCC--S-SCCCHHHHHHHHHH-TTCCEEEEEESC
T ss_pred HHHHHHCCCeEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecccc--c-cCccHHHHHHHHHh-cCCCEEEEcCCC
Confidence 44445555 46665567777888888888777764 6798888877521 0 12346777777776 578888777665
Q ss_pred hhHHHHHHHHHHhhcCCCEEEEe
Q 025860 158 PRFISGLILIIKKVTAKPILIYP 180 (247)
Q Consensus 158 p~~~~~~l~~l~~~~~~pl~vyP 180 (247)
|. ..++.+++. +.|++...
T Consensus 107 p~---~~~~~l~~~-gi~vi~~v 125 (328)
T 2gjl_A 107 PG---EHIAEFRRH-GVKVIHKC 125 (328)
T ss_dssp CH---HHHHHHHHT-TCEEEEEE
T ss_pred cH---HHHHHHHHc-CCCEEeeC
Confidence 53 344445443 56666443
No 223
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=73.33 E-value=45 Score=28.82 Aligned_cols=104 Identities=9% Similarity=-0.028 Sum_probs=61.6
Q ss_pred CHHHHHHHHHHHHHHHhcCCCCEEEEecCC--------------CHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCC
Q 025860 67 TVETLKDFHRRRVQVLVESAPDLIAFETIP--------------NKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSG 132 (247)
Q Consensus 67 s~~e~~~~~~~q~~~l~~~gvD~i~~ET~~--------------~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G 132 (247)
+.+++.+ -++.|.++|++.+-||-.. ...|...-++++++...+.++.|.--.+. .. .
T Consensus 92 ~~~~~~~----~v~~l~~aGa~gv~iEd~~~~k~cgH~~gk~L~p~~~~~~~I~Aa~~a~~~~~~~i~aRtda--~~--~ 163 (295)
T 1xg4_A 92 SAFNVAR----TVKSMIKAGAAGLHIEDQVGAKRSGHRPNKAIVSKEEMVDRIRAAVDAKTDPDFVIMARTDA--LA--V 163 (295)
T ss_dssp SHHHHHH----HHHHHHHHTCSEEEEECBCSSCCCTTSSSCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECC--HH--H
T ss_pred CHHHHHH----HHHHHHHcCCeEEEECCCCCCcccCCCCCCccCCHHHHHHHHHHHHHhccCCCcEEEEecHH--hh--h
Confidence 4455444 4555667899999999753 34466555556655533456665554321 11 1
Q ss_pred CcHHHHHHHHHh--CCCCeEEEEcCCC-hhHHHHHHHHHHhhcCCCEEEEeCC
Q 025860 133 DSLLECASIAES--CKRVVSVGINCTP-PRFISGLILIIKKVTAKPILIYPNS 182 (247)
Q Consensus 133 ~~~~~~~~~~~~--~~~~~avG~NC~~-p~~~~~~l~~l~~~~~~pl~vyPNa 182 (247)
..+.++++.... ..|+++|=+-|.. ++.+..+.+. .+.|+++-+-.
T Consensus 164 ~gl~~ai~ra~ay~eAGAd~i~~e~~~~~~~~~~i~~~----~~iP~~~N~~~ 212 (295)
T 1xg4_A 164 EGLDAAIERAQAYVEAGAEMLFPEAITELAMYRQFADA----VQVPILANITE 212 (295)
T ss_dssp HCHHHHHHHHHHHHHTTCSEEEETTCCSHHHHHHHHHH----HCSCBEEECCS
T ss_pred cCHHHHHHHHHHHHHcCCCEEEEeCCCCHHHHHHHHHH----cCCCEEEEecc
Confidence 235666655431 2589999999973 4555544444 46898775554
No 224
>2qgh_A Diaminopimelate decarboxylase; lyase; HET: PLP LYS; 2.30A {Helicobacter pylori} PDB: 3c5q_A*
Probab=73.23 E-value=26 Score=31.40 Aligned_cols=71 Identities=11% Similarity=0.066 Sum_probs=45.1
Q ss_pred HhcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCC---------C--cccCCCcHHHHHHH---HHhCCC
Q 025860 82 LVESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDG---------V--NVVSGDSLLECASI---AESCKR 147 (247)
Q Consensus 82 l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~---------~--~l~~G~~~~~~~~~---~~~~~~ 147 (247)
+++.|++.+ |+.+..|++.+.+.+++.+...+|++-+....+ + ..+.|.+.+++.+. +....+
T Consensus 120 a~~~gv~~i---~vds~~el~~l~~~a~~~~~~~~v~lrvn~g~~~~~~~~~~tg~~~sRfG~~~~e~~~l~~~~~~~~~ 196 (425)
T 2qgh_A 120 ALKLNILFL---NVESFMELKTIETIAQSLGIKARISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAF 196 (425)
T ss_dssp HHHTTCSEE---EECSHHHHHHHHHHHHHHTCCEEEEEEBCCCCCCCSCGGGBCCSTTSSSSBCHHHHHHHHHHHHHCSS
T ss_pred HHHCCCCEE---EeCCHHHHHHHHHHHHhcCCCceEEEEEeCCCCCCCCcccccCCCCCCCcCCHHHHHHHHHHHHhCCC
Confidence 344677755 566788888877777766545677777654311 1 35678877665444 344457
Q ss_pred CeEEEEcC
Q 025860 148 VVSVGINC 155 (247)
Q Consensus 148 ~~avG~NC 155 (247)
+...|+-|
T Consensus 197 l~l~Gl~~ 204 (425)
T 2qgh_A 197 LEPVSVHF 204 (425)
T ss_dssp EEEEEEEC
T ss_pred ccEEEEEE
Confidence 77888877
No 225
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=73.21 E-value=10 Score=33.43 Aligned_cols=59 Identities=10% Similarity=0.069 Sum_probs=40.5
Q ss_pred HHhcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEEcC
Q 025860 81 VLVESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGINC 155 (247)
Q Consensus 81 ~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~NC 155 (247)
..+++|+|.|.+.+++ +.+++.+++.++. +.++.+| .|.+++.+.+.. + .++|.|++-.
T Consensus 246 eAl~aGaD~I~LDn~~-~~~l~~av~~l~~---~v~ieaS----------GGIt~~~I~~~a-~-tGVD~isvGa 304 (320)
T 3paj_A 246 EAISAGADIIMLDNFS-LEMMREAVKINAG---RAALENS----------GNITLDNLKECA-E-TGVDYISVGA 304 (320)
T ss_dssp HHHHTTCSEEEEESCC-HHHHHHHHHHHTT---SSEEEEE----------SSCCHHHHHHHH-T-TTCSEEECTH
T ss_pred HHHHcCCCEEEECCCC-HHHHHHHHHHhCC---CCeEEEE----------CCCCHHHHHHHH-H-cCCCEEEECc
Confidence 3445899999999974 8888888877652 3444433 467777666644 4 5899988754
No 226
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=72.90 E-value=5.9 Score=34.50 Aligned_cols=59 Identities=15% Similarity=0.183 Sum_probs=39.8
Q ss_pred HhcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEE
Q 025860 82 LVESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGI 153 (247)
Q Consensus 82 l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~ 153 (247)
..++|+|+|.+.|++ +.+++.+++.++...++.|+.+| .|-+++.+.+. .+ .|++.||+
T Consensus 213 A~~aGaD~I~ld~~~-~~~l~~~v~~l~~~~~~~~I~AS----------GGIt~~ni~~~-~~-aGaD~i~v 271 (299)
T 2jbm_A 213 AAEAGADLVLLDNFK-PEELHPTATVLKAQFPSVAVEAS----------GGITLDNLPQF-CG-PHIDVISM 271 (299)
T ss_dssp HHHTTCSEEEEESCC-HHHHHHHHHHHHHHCTTSEEEEE----------SSCCTTTHHHH-CC-TTCCEEEC
T ss_pred HHHcCCCEEEECCCC-HHHHHHHHHHhhccCCCeeEEEE----------CCCCHHHHHHH-HH-CCCCEEEE
Confidence 345899999999964 88888888877653334666544 24555555553 33 57898887
No 227
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=72.83 E-value=20 Score=31.57 Aligned_cols=110 Identities=12% Similarity=0.086 Sum_probs=66.3
Q ss_pred CCHHH---HHHHHHHHHHHHhcCCCCEEEEec--------C-------------CCH-HHH---HHHHHHHHhh-CCCCc
Q 025860 66 ITVET---LKDFHRRRVQVLVESAPDLIAFET--------I-------------PNK-IEA---QAYAELLEEE-NIKIP 116 (247)
Q Consensus 66 ~s~~e---~~~~~~~q~~~l~~~gvD~i~~ET--------~-------------~~~-~E~---~aa~~~~~~~-~~~~p 116 (247)
+|.+| +.+.|.+-++.+.++|.|.|=+=- | .++ ..+ ..+++++++. +.+.|
T Consensus 133 mt~~eI~~ii~~f~~AA~~a~~aGfDgVEih~ahGYLl~qFlsp~~N~R~D~yGGslenR~rf~~eiv~aVr~avg~d~p 212 (343)
T 3kru_A 133 LSVEEIKSIVKAFGEAAKRANLAGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGNSIENRARFLIEVIDEVRKNWPENKP 212 (343)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHTSCTTSC
T ss_pred cCHHHHHHHHHHHHHHHhhccccCCceEEEecccchhHHHhhcccccccchhhccchHhHHHHHHHHHHHHHhcCCccCC
Confidence 55555 556788888888889999986551 0 111 233 3455566654 44679
Q ss_pred EEEEEEEcCCCcccCCCcHHHHHHHHHh--CCCCeEEEEcCC---------ChhHHHHHHHHHHhhcCCCEEE
Q 025860 117 AWFSFNSKDGVNVVSGDSLLECASIAES--CKRVVSVGINCT---------PPRFISGLILIIKKVTAKPILI 178 (247)
Q Consensus 117 v~is~~~~~~~~l~~G~~~~~~~~~~~~--~~~~~avG~NC~---------~p~~~~~~l~~l~~~~~~pl~v 178 (247)
|.+-++..+ ....|.++++.+..+.. .. ++.|=+... .|..-...++.+++..+.|+++
T Consensus 213 v~vRls~~~--~~~~g~~~~~~~~~a~~l~~~-vd~i~vs~g~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~ 282 (343)
T 3kru_A 213 IFVRVSADD--YMEGGINIDMMVEYINMIKDK-VDLIDVSSGGLLNVDINLYPGYQVKYAETIKKRCNIKTSA 282 (343)
T ss_dssp EEEEEECCC--SSTTSCCHHHHHHHHHHHTTT-CSEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHTCEEEE
T ss_pred eEEEeechh--hhccCccHHHHHHHHHHhhcc-ccEEeccCCceEeeeecccCceeehHHHHHHHhcCcccce
Confidence 998887643 22356777765554432 24 777766321 1223456777788777888654
No 228
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=72.70 E-value=41 Score=33.95 Aligned_cols=72 Identities=10% Similarity=0.075 Sum_probs=50.0
Q ss_pred HHHHHHHHHHhcCCCCEEEEecC---------------CCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHH
Q 025860 73 DFHRRRVQVLVESAPDLIAFETI---------------PNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLE 137 (247)
Q Consensus 73 ~~~~~q~~~l~~~gvD~i~~ET~---------------~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~ 137 (247)
+.|.+.++.+.++|+|.|-+--- .+..-+..+++.+++.. ++|+++-++. +.+++.+
T Consensus 648 ~~~~~~a~~~~~~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~~-~~Pv~vK~~~-------~~~~~~~ 719 (1025)
T 1gte_A 648 NDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAV-QIPFFAKLTP-------NVTDIVS 719 (1025)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHHC-SSCEEEEECS-------CSSCHHH
T ss_pred HHHHHHHHHHHhcCCCEEEEECCCCCCCCCCCcccccccCHHHHHHHHHHHHHhh-CCceEEEeCC-------ChHHHHH
Confidence 34555677777899999988521 24455666788888764 6899987742 3446777
Q ss_pred HHHHHHhCCCCeEEEE
Q 025860 138 CASIAESCKRVVSVGI 153 (247)
Q Consensus 138 ~~~~~~~~~~~~avG~ 153 (247)
.++.+.+ .|+++|-+
T Consensus 720 ~a~~~~~-~G~d~i~v 734 (1025)
T 1gte_A 720 IARAAKE-GGADGVTA 734 (1025)
T ss_dssp HHHHHHH-HTCSEEEE
T ss_pred HHHHHHH-cCCCEEEE
Confidence 8887776 47888777
No 229
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=72.67 E-value=37 Score=27.52 Aligned_cols=93 Identities=12% Similarity=0.114 Sum_probs=51.9
Q ss_pred HHHHHHhcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcC--CCcccCCCcHHHHHHHHHhCCCCeEEEEc
Q 025860 77 RRVQVLVESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKD--GVNVVSGDSLLECASIAESCKRVVSVGIN 154 (247)
Q Consensus 77 ~q~~~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~--~~~l~~G~~~~~~~~~~~~~~~~~avG~N 154 (247)
+.++.+.++|++.|-+- ++.. ++.+++.. ++|++ .+...+ +..+.-+.+... ++.+.+ .|++.|-+.
T Consensus 40 ~~a~~~~~~G~~~i~~~---~~~~----i~~i~~~~-~~p~i-~~~~~~~~~~~~~i~~~~~~-i~~~~~-~Gad~V~l~ 108 (234)
T 1yxy_A 40 LMAKAAQEAGAVGIRAN---SVRD----IKEIQAIT-DLPII-GIIKKDYPPQEPFITATMTE-VDQLAA-LNIAVIAMD 108 (234)
T ss_dssp HHHHHHHHHTCSEEEEE---SHHH----HHHHHTTC-CSCEE-EECBCCCTTSCCCBSCSHHH-HHHHHT-TTCSEEEEE
T ss_pred HHHHHHHHCCCcEeecC---CHHH----HHHHHHhC-CCCEE-eeEcCCCCccccccCChHHH-HHHHHH-cCCCEEEEc
Confidence 36677777899998764 3333 44455543 68883 332111 223323334444 444544 578888776
Q ss_pred CC---Ch--hHHHHHHHHHHhhc-CCCEEEEe
Q 025860 155 CT---PP--RFISGLILIIKKVT-AKPILIYP 180 (247)
Q Consensus 155 C~---~p--~~~~~~l~~l~~~~-~~pl~vyP 180 (247)
.. .| ..+..+++.+++.. +.++++-+
T Consensus 109 ~~~~~~~~~~~~~~~i~~i~~~~~~~~v~~~~ 140 (234)
T 1yxy_A 109 CTKRDRHDGLDIASFIRQVKEKYPNQLLMADI 140 (234)
T ss_dssp CCSSCCTTCCCHHHHHHHHHHHCTTCEEEEEC
T ss_pred ccccCCCCCccHHHHHHHHHHhCCCCeEEEeC
Confidence 64 24 35567777777654 45555433
No 230
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=72.47 E-value=49 Score=28.85 Aligned_cols=148 Identities=14% Similarity=0.094 Sum_probs=79.8
Q ss_pred CCHHHHHHHHHHHHHHHhcCCCCEEEEecCC--CHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHH
Q 025860 66 ITVETLKDFHRRRVQVLVESAPDLIAFETIP--NKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAE 143 (247)
Q Consensus 66 ~s~~e~~~~~~~q~~~l~~~gvD~i~~ET~~--~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~ 143 (247)
++.++..+ .++.|.+.|+|.|=+- +| +..+...+.++.+.. .+ +-+..+. ..+ -..++.+++.+.
T Consensus 25 ~~~~~Kl~----ia~~L~~~Gv~~IE~g-~p~~~~~d~e~v~~i~~~~-~~-~~i~~l~-r~~-----~~~i~~a~~al~ 91 (325)
T 3eeg_A 25 LNTEEKII----VAKALDELGVDVIEAG-FPVSSPGDFNSVVEITKAV-TR-PTICALT-RAK-----EADINIAGEALR 91 (325)
T ss_dssp CCTTHHHH----HHHHHHHHTCSEEEEE-CTTSCHHHHHHHHHHHHHC-CS-SEEEEEC-CSC-----HHHHHHHHHHHT
T ss_pred CCHHHHHH----HHHHHHHcCCCEEEEe-CCCCCHhHHHHHHHHHHhC-CC-CEEEEee-cCC-----HHHHHHHHHhhc
Confidence 45566555 5666777899976332 34 455555544433332 12 2333332 111 123455666555
Q ss_pred hCCCCeEEEEcCC-Ch---------------hHHHHHHHHHHhhcCCCEEEEeCCCCcccccccccccCCCCChHHHHHH
Q 025860 144 SCKRVVSVGINCT-PP---------------RFISGLILIIKKVTAKPILIYPNSGEFYDADRKEWVQNTGVSDEDFVSY 207 (247)
Q Consensus 144 ~~~~~~avG~NC~-~p---------------~~~~~~l~~l~~~~~~pl~vyPNaG~~~d~~~~~~~~~~~~~~~~~~~~ 207 (247)
. .+++.|.+-++ +. +.+.+.++..++. ...+.+.+ + +. . ..+++.+.+.
T Consensus 92 ~-ag~~~v~i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~a~~~-g~~v~f~~----~-d~------~--~~~~~~~~~~ 156 (325)
T 3eeg_A 92 F-AKRSRIHTGIGSSDIHIEHKLRSTRENILEMAVAAVKQAKKV-VHEVEFFC----E-DA------G--RADQAFLARM 156 (325)
T ss_dssp T-CSSEEEEEEEECSHHHHC----CCCTTGGGTTHHHHHHHHTT-SSEEEEEE----E-TG------G--GSCHHHHHHH
T ss_pred c-cCCCEEEEEecccHHHHHHHhCCCHHHHHHHHHHHHHHHHHC-CCEEEEEc----c-cc------c--cchHHHHHHH
Confidence 4 47777766432 22 2233444444332 22222111 1 11 1 1458888899
Q ss_pred HHHHHHcCCeEEeecCC---CChHHHHHHHHHhhCCC
Q 025860 208 VSKWCEVGASLVGGCCR---TTPNTIKGIYRTLSNRS 241 (247)
Q Consensus 208 ~~~~~~~G~~iIGGCCG---t~P~hI~al~~~l~~~~ 241 (247)
++...+.|+..|.=|=- .+|..+..+-+.++..-
T Consensus 157 ~~~~~~~G~~~i~l~DT~G~~~P~~v~~lv~~l~~~~ 193 (325)
T 3eeg_A 157 VEAVIEAGADVVNIPDTTGYMLPWQYGERIKYLMDNV 193 (325)
T ss_dssp HHHHHHHTCSEEECCBSSSCCCHHHHHHHHHHHHHHC
T ss_pred HHHHHhcCCCEEEecCccCCcCHHHHHHHHHHHHHhC
Confidence 99999999998865432 58999998877776543
No 231
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=72.24 E-value=44 Score=28.25 Aligned_cols=147 Identities=10% Similarity=0.059 Sum_probs=80.1
Q ss_pred HHHHHHhcCCCCEEEEecCC-----------CHHHHHHHHHHHHhhCCCCcEEEEEEEcC--------------------
Q 025860 77 RRVQVLVESAPDLIAFETIP-----------NKIEAQAYAELLEEENIKIPAWFSFNSKD-------------------- 125 (247)
Q Consensus 77 ~q~~~l~~~gvD~i~~ET~~-----------~~~E~~aa~~~~~~~~~~~pv~is~~~~~-------------------- 125 (247)
+.++.+.++|+|++-+-|+- ..+.++.+.++.++. ++|++.++--..
T Consensus 41 ~~a~~l~~~Ga~~vk~~~fkprts~~~~~g~~~egl~~l~~~~~~~--Gl~~~te~~d~~~~~~l~~~vd~~kIga~~~~ 118 (262)
T 1zco_A 41 KVAEFLAEVGIKVLRGGAFKPRTSPYSFQGYGEKALRWMREAADEY--GLVTVTEVMDTRHVELVAKYSDILQIGARNSQ 118 (262)
T ss_dssp HHHHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHH--TCEEEEECCCGGGHHHHHHHCSEEEECGGGTT
T ss_pred HHHHHHHHcCCCEEEEEecccCCCcccccCccHHHHHHHHHHHHHc--CCcEEEeeCCHHhHHHHHhhCCEEEECccccc
Confidence 37777888999999888763 056666666777666 477776653221
Q ss_pred C----------C---cccCCC--cHHHHHHH---HHhCCCCeEEEEc----CC-C--hhHH-HHHHHHHHhhcCCCEEEE
Q 025860 126 G----------V---NVVSGD--SLLECASI---AESCKRVVSVGIN----CT-P--PRFI-SGLILIIKKVTAKPILIY 179 (247)
Q Consensus 126 ~----------~---~l~~G~--~~~~~~~~---~~~~~~~~avG~N----C~-~--p~~~-~~~l~~l~~~~~~pl~vy 179 (247)
+ + .+..|. +++++... +....+.+.+.+- |. . ++.+ +..+..+++..+.|++++
T Consensus 119 n~~ll~~~a~~~kPV~lk~G~~~t~~e~~~Av~~i~~~Gn~~i~L~~RG~~~~~~y~~~~v~L~ai~~lk~~~~~pVi~d 198 (262)
T 1zco_A 119 NFELLKEVGKVENPVLLKRGMGNTIQELLYSAEYIMAQGNENVILCERGIRTFETATRFTLDISAVPVVKELSHLPIIVD 198 (262)
T ss_dssp CHHHHHHHTTSSSCEEEECCTTCCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEEC
T ss_pred CHHHHHHHHhcCCcEEEecCCCCCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCcChhhcCHHHHHHHHhhhCCCEEEE
Confidence 0 0 133444 35554433 3332233444444 63 2 2222 256666666667787777
Q ss_pred eCCCCcccccccccccCCCCChHHHHHHHHHHHHcCCe--EE-----------eecCCCChHHHHHHHHHhhC
Q 025860 180 PNSGEFYDADRKEWVQNTGVSDEDFVSYVSKWCEVGAS--LV-----------GGCCRTTPNTIKGIYRTLSN 239 (247)
Q Consensus 180 PNaG~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~--iI-----------GGCCGt~P~hI~al~~~l~~ 239 (247)
|+=+.- .+ +.....++..+..|+. +| -|-...+|+..+.|-+.++.
T Consensus 199 ~sH~~g------~~--------~~v~~~~~aAva~Ga~Gl~iE~H~~~d~al~D~~~sl~p~~~~~l~~~i~~ 257 (262)
T 1zco_A 199 PSHPAG------RR--------SLVIPLAKAAYAIGADGIMVEVHPEPEKALSDSQQQLTFDDFLQLLKELEA 257 (262)
T ss_dssp SSTTTC------SG--------GGHHHHHHHHHHTTCSEEEEEBCSSGGGCSSCTTTCBCHHHHHHHHHHHHH
T ss_pred cCCCCC------cc--------chHHHHHHHHHHcCCCEEEEEecCCccccCChhhcCCCHHHHHHHHHHHHH
Confidence 764310 01 1011223334566776 33 45556678887777766654
No 232
>2ocz_A 3-dehydroquinate dehydratase; structural genomics, DH streptococcus pyogenes, dehydroshikimate, PSI-2, protein ST initiative; HET: MSE; 1.85A {Streptococcus pyogenes serotype M1}
Probab=72.23 E-value=41 Score=27.85 Aligned_cols=100 Identities=13% Similarity=0.105 Sum_probs=62.5
Q ss_pred CHHHHHHHHHHHHHHHhcCC-CCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhC
Q 025860 67 TVETLKDFHRRRVQVLVESA-PDLIAFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESC 145 (247)
Q Consensus 67 s~~e~~~~~~~q~~~l~~~g-vD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~ 145 (247)
+.++..+.+ +.+++.| +|++=+|-... .+ .++.++. ...+++|+.-.+.. + +.+.+.+..+..
T Consensus 76 ~~~~~~~ll----~~~~~~g~~d~iDvEl~~~-~~---~i~~~~~---~~kvI~S~Hdf~~t--p--~el~~~~~~~~~- 139 (231)
T 2ocz_A 76 SSQEYVDII----KEINAIYNPDYIDFEYFTH-KS---VFQEMLD---FPNLILSYHNFEET--P--ENLMEAFSEMTK- 139 (231)
T ss_dssp CHHHHHHHH----HHHHHHHCCSEEEEETTTT-GG---GGGGGTT---CSSEEEEEEESSCC--C--TTHHHHHHHHHH-
T ss_pred CHHHHHHHH----HHHHHcCCCCEEEEECCCC-HH---HHHHhhc---CCeEEEEecCCCCC--H--HHHHHHHHHHHH-
Confidence 555544444 4444556 99999996543 22 2222232 37899999843322 1 567777777766
Q ss_pred CCCeEEEEcCC--ChhHHHHHHHHHHhh----cCCCEEEEeCC
Q 025860 146 KRVVSVGINCT--PPRFISGLILIIKKV----TAKPILIYPNS 182 (247)
Q Consensus 146 ~~~~avG~NC~--~p~~~~~~l~~l~~~----~~~pl~vyPNa 182 (247)
.|+|.+=+-+. +++....+++..... .+.|++++.-+
T Consensus 140 ~gaDivKia~~a~~~~D~l~ll~~~~~~~~~~~~~P~I~~~MG 182 (231)
T 2ocz_A 140 LAPRVVKIAVMPQSEQDVLDLMNYTRGFKTLNPEQEFATISMG 182 (231)
T ss_dssp TCCSEEEEEECCSSHHHHHHHHHHHHHHHHHCTTCEEEEEECH
T ss_pred cCCCEEEEEeecCCHHHHHHHHHHHHHHhhccCCCCEEEEEcC
Confidence 68898887775 577777777654332 46799887654
No 233
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=71.94 E-value=21 Score=31.07 Aligned_cols=85 Identities=14% Similarity=0.085 Sum_probs=51.9
Q ss_pred HHHHHHHHhcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEEc
Q 025860 75 HRRRVQVLVESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGIN 154 (247)
Q Consensus 75 ~~~q~~~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~N 154 (247)
+.++++.+.+.|+|++.+=. ....| .++.+++. +.|+++.+ .+++.+ +.+.+ .++|+|.+.
T Consensus 77 ~~~~~~~a~~~g~d~V~~~~-g~p~~---~i~~l~~~--g~~v~~~v-----------~~~~~a-~~~~~-~GaD~i~v~ 137 (332)
T 2z6i_A 77 VEDIVDLVIEEGVKVVTTGA-GNPSK---YMERFHEA--GIIVIPVV-----------PSVALA-KRMEK-IGADAVIAE 137 (332)
T ss_dssp HHHHHHHHHHTTCSEEEECS-SCGGG---THHHHHHT--TCEEEEEE-----------SSHHHH-HHHHH-TTCSCEEEE
T ss_pred HHHHHHHHHHCCCCEEEECC-CChHH---HHHHHHHc--CCeEEEEe-----------CCHHHH-HHHHH-cCCCEEEEE
Confidence 34577778889999987643 23333 34556654 58888765 244544 33444 478888774
Q ss_pred C---C---ChhHHHHHHHHHHhhcCCCEEE
Q 025860 155 C---T---PPRFISGLILIIKKVTAKPILI 178 (247)
Q Consensus 155 C---~---~p~~~~~~l~~l~~~~~~pl~v 178 (247)
. . +......+++.+++..+.|+++
T Consensus 138 g~~~GG~~g~~~~~~ll~~i~~~~~iPVia 167 (332)
T 2z6i_A 138 GMEAGGHIGKLTTMTLVRQVATAISIPVIA 167 (332)
T ss_dssp CTTSSEECCSSCHHHHHHHHHHHCSSCEEE
T ss_pred CCCCCCCCCCccHHHHHHHHHHhcCCCEEE
Confidence 3 1 1123347778887777888654
No 234
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=71.68 E-value=28 Score=30.22 Aligned_cols=86 Identities=8% Similarity=-0.006 Sum_probs=55.7
Q ss_pred HHHhcCCC-CEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEEcCCCh
Q 025860 80 QVLVESAP-DLIAFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGINCTPP 158 (247)
Q Consensus 80 ~~l~~~gv-D~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~NC~~p 158 (247)
....++|. ++|..+ ..+.++++..++.+++.. +.|+.+.+...+ ..+.+.++.+.+ .++++|-+++..|
T Consensus 30 ~av~~aG~lG~i~~~-~~~~~~~~~~i~~i~~~~-~~p~gvnl~~~~-------~~~~~~~~~a~~-~g~d~V~~~~g~p 99 (332)
T 2z6i_A 30 GAVSKAGGLGIIGGG-NAPKEVVKANIDKIKSLT-DKPFGVNIMLLS-------PFVEDIVDLVIE-EGVKVVTTGAGNP 99 (332)
T ss_dssp HHHHHHTSBEEEECT-TCCHHHHHHHHHHHHHHC-CSCEEEEECTTS-------TTHHHHHHHHHH-TTCSEEEECSSCG
T ss_pred HHHHhCCCcEEeCCC-CCCHHHHHHHHHHHHHhc-CCCEEEEecCCC-------CCHHHHHHHHHH-CCCCEEEECCCCh
Confidence 33445564 666554 346788887777777764 679988875421 236777877776 5899999999877
Q ss_pred hHHHHHHHHHHhhcCCCEEEE
Q 025860 159 RFISGLILIIKKVTAKPILIY 179 (247)
Q Consensus 159 ~~~~~~l~~l~~~~~~pl~vy 179 (247)
..+.+. +++ .+.|+++.
T Consensus 100 ~~~i~~---l~~-~g~~v~~~ 116 (332)
T 2z6i_A 100 SKYMER---FHE-AGIIVIPV 116 (332)
T ss_dssp GGTHHH---HHH-TTCEEEEE
T ss_pred HHHHHH---HHH-cCCeEEEE
Confidence 544333 333 25666544
No 235
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=71.33 E-value=16 Score=31.28 Aligned_cols=63 Identities=13% Similarity=-0.007 Sum_probs=44.9
Q ss_pred HHHHHhcCCCCEEEEec-CCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEEcC
Q 025860 78 RVQVLVESAPDLIAFET-IPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGINC 155 (247)
Q Consensus 78 q~~~l~~~gvD~i~~ET-~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~NC 155 (247)
|+..+...|+|.+++=+ .-+..+++..++.+++.+ +-+++.+ .+.+++-+.+ . .+++.||+|=
T Consensus 134 qi~ea~~~GAD~VlLi~a~L~~~~l~~l~~~a~~lG--l~~lvev-----------h~~eEl~~A~-~-~ga~iIGinn 197 (272)
T 3tsm_A 134 QVYEARSWGADCILIIMASVDDDLAKELEDTAFALG--MDALIEV-----------HDEAEMERAL-K-LSSRLLGVNN 197 (272)
T ss_dssp HHHHHHHTTCSEEEEETTTSCHHHHHHHHHHHHHTT--CEEEEEE-----------CSHHHHHHHT-T-SCCSEEEEEC
T ss_pred HHHHHHHcCCCEEEEcccccCHHHHHHHHHHHHHcC--CeEEEEe-----------CCHHHHHHHH-h-cCCCEEEECC
Confidence 56666779999988774 555678888888888874 5555554 2556665544 3 5899999995
No 236
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=70.45 E-value=39 Score=29.68 Aligned_cols=102 Identities=9% Similarity=0.071 Sum_probs=62.3
Q ss_pred HHHHHHHHHhcCCCCEEEEec----------------CCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCC---c
Q 025860 74 FHRRRVQVLVESAPDLIAFET----------------IPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGD---S 134 (247)
Q Consensus 74 ~~~~q~~~l~~~gvD~i~~ET----------------~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~---~ 134 (247)
.|.+.++.+.+.|+|.|=+-. +.+.+-+..+++.+++.- +.||.+-+...-+ +.. .
T Consensus 71 ~~~~aA~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v-~~PV~vKiR~g~~----~~~~~~~ 145 (350)
T 3b0p_A 71 SLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAV-RVPVTVKMRLGLE----GKETYRG 145 (350)
T ss_dssp HHHHHHHHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHC-SSCEEEEEESCBT----TCCCHHH
T ss_pred HHHHHHHHHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHh-CCceEEEEecCcC----ccccHHH
Confidence 355567777789999997763 123445566777777654 6898875542111 112 3
Q ss_pred HHHHHHHHHhCCCCeEEEEcCCC------hh-------HHHHHHHHHHhhc-CCCEEEEeCCC
Q 025860 135 LLECASIAESCKRVVSVGINCTP------PR-------FISGLILIIKKVT-AKPILIYPNSG 183 (247)
Q Consensus 135 ~~~~~~~~~~~~~~~avG~NC~~------p~-------~~~~~l~~l~~~~-~~pl~vyPNaG 183 (247)
..+.++.+.+ .|+++|-+.... +. .-..++..+++.. ++||+ .|+|
T Consensus 146 ~~~~a~~l~~-aG~d~I~V~~r~~~~g~~g~~~~~~~~~~~~~i~~ik~~~~~iPVi--anGg 205 (350)
T 3b0p_A 146 LAQSVEAMAE-AGVKVFVVHARSALLALSTKANREIPPLRHDWVHRLKGDFPQLTFV--TNGG 205 (350)
T ss_dssp HHHHHHHHHH-TTCCEEEEECSCBC----------CCCCCHHHHHHHHHHCTTSEEE--EESS
T ss_pred HHHHHHHHHH-cCCCEEEEecCchhcccCcccccCCCcccHHHHHHHHHhCCCCeEE--EECC
Confidence 4556666666 589988887631 11 1245677777776 77854 5555
No 237
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=70.18 E-value=57 Score=29.63 Aligned_cols=141 Identities=19% Similarity=0.156 Sum_probs=82.1
Q ss_pred HHHHHHHHHHHHhcCCCCEEEEec----------CCCHHHHHHHHHHHHhh-------------------CCCCc-EEEE
Q 025860 71 LKDFHRRRVQVLVESAPDLIAFET----------IPNKIEAQAYAELLEEE-------------------NIKIP-AWFS 120 (247)
Q Consensus 71 ~~~~~~~q~~~l~~~gvD~i~~ET----------~~~~~E~~aa~~~~~~~-------------------~~~~p-v~is 120 (247)
..+.|.+-++.|.+. +|+|-+-- +.+.+.+..+++.+++. ..++| |++-
T Consensus 197 ~~~Dy~~~a~~l~~~-ad~ieiNiScPNt~Gl~~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~~~~~~~~~~~~P~V~VK 275 (415)
T 3i65_A 197 IVDDLKYCINKIGRY-ADYIAINVSSPNTPGLRDNQEAGKLKNIILSVKEEIDNLEKNNIMNDEFLWFNTTKKKPLVFVK 275 (415)
T ss_dssp HHHHHHHHHHHHGGG-CSEEEEECCCCC--------CCHHHHHHHHHHHHHHHHHHHHCCSCHHHHCCSSSSSCCEEEEE
T ss_pred cHHHHHHHHHHHHhh-CCEEEEECCCCCCCCcccccCHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCeEEEE
Confidence 345566677777654 89987662 23345566666666553 12578 8877
Q ss_pred EEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEE-cCCC-----------------h---hHHHHHHHHHHhhc--CCCEE
Q 025860 121 FNSKDGVNVVSGDSLLECASIAESCKRVVSVGI-NCTP-----------------P---RFISGLILIIKKVT--AKPIL 177 (247)
Q Consensus 121 ~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~-NC~~-----------------p---~~~~~~l~~l~~~~--~~pl~ 177 (247)
++..- +-+.+.++++.+.+ .++++|-+ |-+. + .....++.++++.. ++||+
T Consensus 276 i~pd~-----~~~~i~~iA~~a~~-aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~v~~~iPII 349 (415)
T 3i65_A 276 LAPDL-----NQEQKKEIADVLLE-TNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPII 349 (415)
T ss_dssp ECSCC-----CHHHHHHHHHHHHH-HTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHHTTTCSCEE
T ss_pred ecCCC-----CHHHHHHHHHHHHH-cCCcEEEEeCCCcccccccccccccCCcCCccchHHHHHHHHHHHHHhCCCCCEE
Confidence 75321 12246777777766 47886543 4331 1 23456777777776 57754
Q ss_pred EEeCCCCcccccccccccCCCCChHHHHHHHHHHHHcCCeEEeecCCC---ChHHHHHHHHHhh
Q 025860 178 IYPNSGEFYDADRKEWVQNTGVSDEDFVSYVSKWCEVGASLVGGCCRT---TPNTIKGIYRTLS 238 (247)
Q Consensus 178 vyPNaG~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~iIGGCCGt---~P~hI~al~~~l~ 238 (247)
.++|. .++++ +.+.+..|++.|.-+-+. +|.-++.|.+.|.
T Consensus 350 --g~GGI--------------~s~eD----a~e~l~aGAd~VqIgra~l~~GP~~~~~i~~~L~ 393 (415)
T 3i65_A 350 --ASGGI--------------FSGLD----ALEKIEAGASVCQLYSCLVFNGMKSAVQIKRELN 393 (415)
T ss_dssp --ECSSC--------------CSHHH----HHHHHHHTEEEEEESHHHHHHGGGHHHHHHHHHH
T ss_pred --EECCC--------------CCHHH----HHHHHHcCCCEEEEcHHHHhcCHHHHHHHHHHHH
Confidence 44442 12433 334556788887765553 5877877776654
No 238
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=70.14 E-value=19 Score=29.40 Aligned_cols=79 Identities=8% Similarity=0.003 Sum_probs=46.4
Q ss_pred HHHHHHhcCCCCEEEEecC-----CCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEE
Q 025860 77 RRVQVLVESAPDLIAFETI-----PNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSV 151 (247)
Q Consensus 77 ~q~~~l~~~gvD~i~~ET~-----~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~av 151 (247)
+.++.+.++|+|.|-+=++ +.... ..++.+++.. ++|+++.-- + .++++ ++.+.. .+++.|
T Consensus 35 ~~a~~~~~~Gad~i~v~~~d~~~~~~~~~--~~i~~i~~~~-~ipv~v~gg------i---~~~~~-~~~~l~-~Gad~V 100 (244)
T 2y88_A 35 DAALGWQRDGAEWIHLVDLDAAFGRGSNH--ELLAEVVGKL-DVQVELSGG------I---RDDES-LAAALA-TGCARV 100 (244)
T ss_dssp HHHHHHHHTTCSEEEEEEHHHHTTSCCCH--HHHHHHHHHC-SSEEEEESS------C---CSHHH-HHHHHH-TTCSEE
T ss_pred HHHHHHHHcCCCEEEEEcCcccccCCChH--HHHHHHHHhc-CCcEEEECC------C---CCHHH-HHHHHH-cCCCEE
Confidence 3566777899999987543 22222 3344444443 689887421 1 23454 344444 478888
Q ss_pred EEcCC---ChhHHHHHHHHHH
Q 025860 152 GINCT---PPRFISGLILIIK 169 (247)
Q Consensus 152 G~NC~---~p~~~~~~l~~l~ 169 (247)
.+... .|+.+..+++.+.
T Consensus 101 ~lg~~~l~~p~~~~~~~~~~g 121 (244)
T 2y88_A 101 NVGTAALENPQWCARVIGEHG 121 (244)
T ss_dssp EECHHHHHCHHHHHHHHHHHG
T ss_pred EECchHhhChHHHHHHHHHcC
Confidence 88774 5666666666654
No 239
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=70.02 E-value=32 Score=28.38 Aligned_cols=109 Identities=11% Similarity=0.055 Sum_probs=63.3
Q ss_pred HHHHHHhcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEEcCC
Q 025860 77 RRVQVLVESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGINCT 156 (247)
Q Consensus 77 ~q~~~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~NC~ 156 (247)
++++..+++|+|++.. |.. -..++++.++. +.|+++.. .++.++.+.. . .|++.|++
T Consensus 89 d~~~~A~~aGAd~v~~---p~~--d~~v~~~~~~~--g~~~i~G~-----------~t~~e~~~A~-~-~Gad~vk~--- 145 (225)
T 1mxs_A 89 SMFAAVEAAGAQFVVT---PGI--TEDILEAGVDS--EIPLLPGI-----------STPSEIMMGY-A-LGYRRFKL--- 145 (225)
T ss_dssp HHHHHHHHHTCSSEEC---SSC--CHHHHHHHHHC--SSCEECEE-----------CSHHHHHHHH-T-TTCCEEEE---
T ss_pred HHHHHHHHCCCCEEEe---CCC--CHHHHHHHHHh--CCCEEEee-----------CCHHHHHHHH-H-CCCCEEEE---
Confidence 4677777788888863 322 13444555555 46666542 2457776654 3 58999999
Q ss_pred Ch-hHH--HHHHHHHHhhc-CCCEEEEeCCCCcccccccccccCCCCChHHHHHHHHHHHH-cCCeEEeecCCCChHH
Q 025860 157 PP-RFI--SGLILIIKKVT-AKPILIYPNSGEFYDADRKEWVQNTGVSDEDFVSYVSKWCE-VGASLVGGCCRTTPNT 229 (247)
Q Consensus 157 ~p-~~~--~~~l~~l~~~~-~~pl~vyPNaG~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~G~~iIGGCCGt~P~h 229 (247)
-| +.+ ...|+.++... +.|+ .|=+|. +++ .+.+|++ .|+..+||--=+..+.
T Consensus 146 FPa~~~~G~~~lk~i~~~~~~ipv--vaiGGI---------------~~~----N~~~~l~~~Ga~~v~gSai~~~~~ 202 (225)
T 1mxs_A 146 FPAEISGGVAAIKAFGGPFGDIRF--CPTGGV---------------NPA----NVRNYMALPNVMCVGTTWMLDSSW 202 (225)
T ss_dssp TTHHHHTHHHHHHHHHTTTTTCEE--EEBSSC---------------CTT----THHHHHHSTTBCCEEECTTSCHHH
T ss_pred ccCccccCHHHHHHHHhhCCCCeE--EEECCC---------------CHH----HHHHHHhccCCEEEEEchhcCchh
Confidence 34 222 56677776654 4554 444442 232 4455888 6888888443344443
No 240
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=70.01 E-value=51 Score=28.09 Aligned_cols=150 Identities=11% Similarity=0.086 Sum_probs=80.0
Q ss_pred CCHHHHHHHHHHHHHHHhcCCCCEEEEecC------CCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHH
Q 025860 66 ITVETLKDFHRRRVQVLVESAPDLIAFETI------PNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECA 139 (247)
Q Consensus 66 ~s~~e~~~~~~~q~~~l~~~gvD~i~~ET~------~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~ 139 (247)
++.++..+ .++.|.+.|||.|=+=++ |.+.+...+++.+++.. +.++.+ + + . ...+ +
T Consensus 24 ~~~e~k~~----i~~~L~~~Gv~~IE~g~~~~~~~~p~~~d~~~~~~~~~~~~-~~~~~~-l-~-~--------~~~~-i 86 (298)
T 2cw6_A 24 VSTPVKIK----LIDMLSEAGLSVIETTSFVSPKWVPQMGDHTEVLKGIQKFP-GINYPV-L-T-P--------NLKG-F 86 (298)
T ss_dssp CCHHHHHH----HHHHHHHTTCSEECCEECCCTTTCGGGTTHHHHHHHSCCCT-TCBCCE-E-C-C--------SHHH-H
T ss_pred CCHHHHHH----HHHHHHHcCcCEEEECCCcCcccccccCCHHHHHHHHhhCC-CCEEEE-E-c-C--------CHHh-H
Confidence 57777666 566677899998855443 43344445555555432 333322 1 1 1 1222 3
Q ss_pred HHHHhCCCCeEEEEcCC-Chh---------------HHHHHHHHHHhhcCCCEEEEeCCCCcccccccccccCCCCChHH
Q 025860 140 SIAESCKRVVSVGINCT-PPR---------------FISGLILIIKKVTAKPILIYPNSGEFYDADRKEWVQNTGVSDED 203 (247)
Q Consensus 140 ~~~~~~~~~~avG~NC~-~p~---------------~~~~~l~~l~~~~~~pl~vyPNaG~~~d~~~~~~~~~~~~~~~~ 203 (247)
+.+.+ .+++.|.+--. +.. .+.+.++..++ ...++.++.-. .+... +.. ..++++
T Consensus 87 ~~a~~-ag~~~v~i~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~-~G~~v~~~l~~--~~~~~---~~~--~~~~~~ 157 (298)
T 2cw6_A 87 EAAVA-AGAKEVVIFGAASELFTKKNINCSIEESFQRFDAILKAAQS-ANISVRGYVSC--ALGCP---YEG--KISPAK 157 (298)
T ss_dssp HHHHH-TTCSEEEEEEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHH-TTCEEEEEEET--TTCBT---TTB--SCCHHH
T ss_pred HHHHH-CCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHH-CCCeEEEEEEE--EeeCC---cCC--CCCHHH
Confidence 33333 36666655332 222 22333333333 24554443321 11110 111 146888
Q ss_pred HHHHHHHHHHcCCeEEeec--C-CCChHHHHHHHHHhhCCC
Q 025860 204 FVSYVSKWCEVGASLVGGC--C-RTTPNTIKGIYRTLSNRS 241 (247)
Q Consensus 204 ~~~~~~~~~~~G~~iIGGC--C-Gt~P~hI~al~~~l~~~~ 241 (247)
+.+.++...+.|+..|.=| - ..+|..+..+-+.+.+..
T Consensus 158 ~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~~ 198 (298)
T 2cw6_A 158 VAEVTKKFYSMGCYEISLGDTIGVGTPGIMKDMLSAVMQEV 198 (298)
T ss_dssp HHHHHHHHHHTTCSEEEEEETTSCCCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHcCCCEEEecCCCCCcCHHHHHHHHHHHHHhC
Confidence 9999999999999987544 1 358999999877776543
No 241
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=69.88 E-value=41 Score=29.97 Aligned_cols=98 Identities=19% Similarity=0.204 Sum_probs=59.2
Q ss_pred HHHHhcCCCCEEEEe-cCCC-------------HHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHh
Q 025860 79 VQVLVESAPDLIAFE-TIPN-------------KIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAES 144 (247)
Q Consensus 79 ~~~l~~~gvD~i~~E-T~~~-------------~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~ 144 (247)
++..+++|+|.+-+= ..++ ++.++.+++.+++.+ ..+-+.|++.+..+. +-+-+.+.++.+.+
T Consensus 80 i~~a~~~g~~~v~i~~~~s~~~~~~~~~s~~e~l~~~~~~v~~ak~~g--~~~~v~~~~ed~~~~-~~~~~~~~~~~~~~ 156 (382)
T 2ztj_A 80 AKVAVETGVQGIDLLFGTSKYLRAPHGRDIPRIIEEAKEVIAYIREAA--PHVEVRFSAEDTFRS-EEQDLLAVYEAVAP 156 (382)
T ss_dssp HHHHHHTTCSEEEEEECC--------CCCHHHHHHHHHHHHHHHHHHC--TTSEEEEEETTTTTS-CHHHHHHHHHHHGG
T ss_pred HHHHHHcCCCEEEEEeccCHHHHHHhCCCHHHHHHHHHHHHHHHHHcC--CCEEEEEEEEeCCCC-CHHHHHHHHHHHHH
Confidence 455667899976432 2222 344667777788775 234555665543321 22234445555555
Q ss_pred CCCCeEEEEcC----CChhHHHHHHHHHHhh--cCCCEEEEeC
Q 025860 145 CKRVVSVGINC----TPPRFISGLILIIKKV--TAKPILIYPN 181 (247)
Q Consensus 145 ~~~~~avG~NC----~~p~~~~~~l~~l~~~--~~~pl~vyPN 181 (247)
. ++.|.+.= ..|..+..+++.+++. .+.||.+...
T Consensus 157 -~-a~~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~~i~~H~H 197 (382)
T 2ztj_A 157 -Y-VDRVGLADTVGVATPRQVYALVREVRRVVGPRVDIEFHGH 197 (382)
T ss_dssp -G-CSEEEEEETTSCCCHHHHHHHHHHHHHHHTTTSEEEEEEB
T ss_pred -h-cCEEEecCCCCCCCHHHHHHHHHHHHHhcCCCCeEEEEeC
Confidence 4 77776642 2499999999999887 6778877663
No 242
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=69.80 E-value=5 Score=34.47 Aligned_cols=41 Identities=22% Similarity=0.217 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHhcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEE
Q 025860 72 KDFHRRRVQVLVESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAW 118 (247)
Q Consensus 72 ~~~~~~q~~~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~ 118 (247)
.+.-.++++++.++|+|.|++|.+|. .+++.+ .++. +.|++
T Consensus 160 a~~~i~rA~a~~eAGA~~ivlE~vp~-~~a~~i---t~~l--~iP~i 200 (264)
T 1m3u_A 160 GDQLLSDALALEAAGAQLLVLECVPV-ELAKRI---TEAL--AIPVI 200 (264)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEESCCH-HHHHHH---HHHC--SSCEE
T ss_pred HHHHHHHHHHHHHCCCcEEEEecCCH-HHHHHH---HHhC--CCCEE
Confidence 35555699999999999999999984 444433 3333 46755
No 243
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=69.59 E-value=43 Score=31.99 Aligned_cols=111 Identities=14% Similarity=0.088 Sum_probs=66.7
Q ss_pred CCHHH---HHHHHHHHHHHHhcCCCCEEEEec----------------------CCCHH-HHH---HHHHHHHhh-CCCC
Q 025860 66 ITVET---LKDFHRRRVQVLVESAPDLIAFET----------------------IPNKI-EAQ---AYAELLEEE-NIKI 115 (247)
Q Consensus 66 ~s~~e---~~~~~~~q~~~l~~~gvD~i~~ET----------------------~~~~~-E~~---aa~~~~~~~-~~~~ 115 (247)
++.+| +.+.|.+-++.+.++|.|.+=+=- =.+++ .++ .+++++++. +.+.
T Consensus 146 ~t~~ei~~~i~~f~~aA~~a~~aGfDgVeih~a~gy~L~~qFlsp~~N~R~D~yGGs~enR~r~~~ei~~avr~~~g~~~ 225 (690)
T 3k30_A 146 MTKQDIDDLRRWHRNAVRRSIEAGYDIVYVYGAHGYSGVHHFLSKRYNQRTDEYGGSLENRMRLLRELLEDTLDECAGRA 225 (690)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTCSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTSS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCEEEEcccccchHHHHhCCCccCCCccccCCCHHHHHHHHHHHHHHHHHHhCCCc
Confidence 55555 556788788888889999985511 12222 233 344455543 4467
Q ss_pred cEEEEEEEcCCCcccCCCcHHHHHHHHHh-CCCCeEEEEcCCCh------------hHHHHHHHHHHhhcCCCEEE
Q 025860 116 PAWFSFNSKDGVNVVSGDSLLECASIAES-CKRVVSVGINCTPP------------RFISGLILIIKKVTAKPILI 178 (247)
Q Consensus 116 pv~is~~~~~~~~l~~G~~~~~~~~~~~~-~~~~~avG~NC~~p------------~~~~~~l~~l~~~~~~pl~v 178 (247)
||.+-++..+.. ..|.++++.++.+.. ..+++.+.+..... ......++.+++..+.|+++
T Consensus 226 ~v~~r~s~~~~~--~~g~~~~~~~~~~~~l~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pvi~ 299 (690)
T 3k30_A 226 AVACRITVEEEI--DGGITREDIEGVLRELGELPDLWDFAMGSWEGDSVTSRFAPEGRQEEFVAGLKKLTTKPVVG 299 (690)
T ss_dssp EEEEEEECCCCS--TTSCCHHHHHHHHHHHTTSSSEEEEECSCHHHHTCCTTTCCTTTTHHHHTTSGGGCSSCEEE
T ss_pred eEEEEECccccC--CCCCCHHHHHHHHHHHHhhcCEEEEecccccccCCCCccCCccccHHHHHHHHHHcCCeEEE
Confidence 888888765432 467777765544431 12578888887421 12245667777778889654
No 244
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=69.33 E-value=55 Score=28.80 Aligned_cols=65 Identities=3% Similarity=-0.068 Sum_probs=42.2
Q ss_pred HHHHHHhcC--CCCEEEEec-CCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEE
Q 025860 77 RRVQVLVES--APDLIAFET-IPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGI 153 (247)
Q Consensus 77 ~q~~~l~~~--gvD~i~~ET-~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~ 153 (247)
++++.+++. |+|++.+.+ ..+.......++.+++..+++|+++.. ..+.+++... .+ .|+|+|-+
T Consensus 121 ~~~~~l~~~~~g~~~i~i~~~~g~~~~~~~~i~~lr~~~~~~~vi~g~----------v~t~e~A~~a-~~-aGaD~I~v 188 (351)
T 2c6q_A 121 EQLEQILEAIPQVKYICLDVANGYSEHFVEFVKDVRKRFPQHTIMAGN----------VVTGEMVEEL-IL-SGADIIKV 188 (351)
T ss_dssp HHHHHHHHHCTTCCEEEEECSCTTBHHHHHHHHHHHHHCTTSEEEEEE----------ECSHHHHHHH-HH-TTCSEEEE
T ss_pred HHHHHHHhccCCCCEEEEEecCCCcHHHHHHHHHHHHhcCCCeEEEEe----------CCCHHHHHHH-HH-hCCCEEEE
Confidence 466777765 999988874 334555666677777764357888543 3356666654 44 48898866
No 245
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=69.13 E-value=40 Score=29.94 Aligned_cols=92 Identities=7% Similarity=-0.045 Sum_probs=57.1
Q ss_pred HHHHHHhCCCCeEEEEcCCC---------h-----------------hHHHHHHHHHHhhcC-CCEEEEeCCCCcccccc
Q 025860 138 CASIAESCKRVVSVGINCTP---------P-----------------RFISGLILIIKKVTA-KPILIYPNSGEFYDADR 190 (247)
Q Consensus 138 ~~~~~~~~~~~~avG~NC~~---------p-----------------~~~~~~l~~l~~~~~-~pl~vyPNaG~~~d~~~ 190 (247)
+++.+.+ .|.|+|=||+.+ | ..+.++++.+++... .||++.-+....+++
T Consensus 166 AA~~A~~-aGfDgVEih~a~GYLl~QFLsp~~N~RtD~yGGslenR~rf~~evv~aVr~~vg~~~v~vRls~~~~~~g-- 242 (361)
T 3gka_A 166 GAENARA-AGFDGVEVHGANGYLLDQFLQDSANRRTDAYGGSIENRARLLLEVVDAAIDVWSAARVGVHLAPRGDAHT-- 242 (361)
T ss_dssp HHHHHHH-TTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHSHHHHHHHHHHHHHHCGGGEEEEECTTCCSSS--
T ss_pred HHHHHHH-cCCCEEEECCcCccHHHhccCcccccccCCCCCChhhcHHHHHHHHHHHHHHcCCCeEEEecccccccCC--
Confidence 3443444 589999999975 3 245667777777653 299998876432211
Q ss_pred cccccCCCCChHHHHHHHHHHHHcCCeEE---eecCCCChHHHHHHHHHhh
Q 025860 191 KEWVQNTGVSDEDFVSYVSKWCEVGASLV---GGCCRTTPNTIKGIYRTLS 238 (247)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~G~~iI---GGCCGt~P~hI~al~~~l~ 238 (247)
+... .+.+++.+.++.+.+.|+.+| +|. .+++.++.+++.++
T Consensus 243 --~~~~--~~~~~~~~la~~l~~~Gvd~i~v~~~~--~~~~~~~~ik~~~~ 287 (361)
T 3gka_A 243 --MGDS--DPAATFGHVARELGRRRIAFLFARESF--GGDAIGQQLKAAFG 287 (361)
T ss_dssp --CCCS--CHHHHHHHHHHHHHHTTCSEEEEECCC--STTCCHHHHHHHHC
T ss_pred --CCCC--CcHHHHHHHHHHHHHcCCCEEEECCCC--CCHHHHHHHHHHcC
Confidence 1100 123567788888888887765 333 34567777777764
No 246
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=69.00 E-value=46 Score=28.65 Aligned_cols=94 Identities=13% Similarity=0.071 Sum_probs=55.0
Q ss_pred HHHHHHHhcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCC------CcccCCCc--HHHHHHH---HHh
Q 025860 76 RRRVQVLVESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDG------VNVVSGDS--LLECASI---AES 144 (247)
Q Consensus 76 ~~q~~~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~------~~l~~G~~--~~~~~~~---~~~ 144 (247)
+.-++.+.++|++.+=+|-.. |+..-++++.+. +.||+--+=+.+. +...-|-+ .+++++. +.+
T Consensus 116 ~na~rl~~eaGa~aVklEdg~---e~~~~I~al~~a--gIpV~gHiGLtPqsv~~~ggf~v~grt~~a~~~i~rA~a~~e 190 (281)
T 1oy0_A 116 AAATRFLKDGGAHAVKLEGGE---RVAEQIACLTAA--GIPVMAHIGFTPQSVNTLGGFRVQGRGDAAEQTIADAIAVAE 190 (281)
T ss_dssp HHHHHHHHTTCCSEEEEEBSG---GGHHHHHHHHHH--TCCEEEEEECCC--------------CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCeEEEECCcH---HHHHHHHHHHHC--CCCEEeeecCCcceecccCCeEEEeCcHHHHHHHHHHHHHHH
Confidence 334555567999999999874 445556666666 4888844433221 11122322 2333333 234
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhhcCCCEEEE
Q 025860 145 CKRVVSVGINCTPPRFISGLILIIKKVTAKPILIY 179 (247)
Q Consensus 145 ~~~~~avG~NC~~p~~~~~~l~~l~~~~~~pl~vy 179 (247)
.|+++|=+-|... ++.+.+.+..++|++..
T Consensus 191 -AGA~~ivlE~vp~----~~a~~it~~l~iP~igI 220 (281)
T 1oy0_A 191 -AGAFAVVMEMVPA----ELATQITGKLTIPTVGI 220 (281)
T ss_dssp -HTCSEEEEESCCH----HHHHHHHHHCSSCEEEE
T ss_pred -cCCcEEEEecCCH----HHHHHHHHhCCCCEEEe
Confidence 5899999999853 35666777778997654
No 247
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=68.79 E-value=56 Score=28.04 Aligned_cols=148 Identities=11% Similarity=0.053 Sum_probs=80.9
Q ss_pred HHHHhcCCCCEEEEec-------------CCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHH---HH
Q 025860 79 VQVLVESAPDLIAFET-------------IPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECAS---IA 142 (247)
Q Consensus 79 ~~~l~~~gvD~i~~ET-------------~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~---~~ 142 (247)
++.+-++|+|+|+.=. .-+++|+..-.+.+.+.. +.|+++ ....-. .-+.+.+++++ .+
T Consensus 30 A~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vTldemi~h~~aV~r~~-~~~~vv-aD~pfg---sy~~s~~~a~~na~rl 104 (275)
T 1o66_A 30 AALMDDAGVEMLLVGDSLGMAVQGRKSTLPVSLRDMCYHTECVARGA-KNAMIV-SDLPFG---AYQQSKEQAFAAAAEL 104 (275)
T ss_dssp HHHHHHTTCCEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHC-SSSEEE-EECCTT---SSSSCHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEECHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhhC-CCCeEE-EECCCC---CccCCHHHHHHHHHHH
Confidence 4455679999998620 124778877777777653 455444 432211 12346777665 34
Q ss_pred HhCCCCeEEEEcCCChhHHHHHHHHHHhhcCCCEEEEeCCCC-ccccc-ccccc-cCCCCChHHHHHHHHHHHHcCCeEE
Q 025860 143 ESCKRVVSVGINCTPPRFISGLILIIKKVTAKPILIYPNSGE-FYDAD-RKEWV-QNTGVSDEDFVSYVSKWCEVGASLV 219 (247)
Q Consensus 143 ~~~~~~~avG~NC~~p~~~~~~l~~l~~~~~~pl~vyPNaG~-~~d~~-~~~~~-~~~~~~~~~~~~~~~~~~~~G~~iI 219 (247)
.+ .|+++|-+--. ..+.+.++.+.+ ..+|++ .+.|. +.... ...|. ..+....++..+-++.+.++|+..|
T Consensus 105 ~k-aGa~aVklEdg--~e~~~~I~al~~-agIpV~--gHiGLtPQs~~~~ggf~v~grt~~a~~~i~rA~a~~eAGA~~i 178 (275)
T 1o66_A 105 MA-AGAHMVKLEGG--VWMAETTEFLQM-RGIPVC--AHIGLTPQSVFAFGGYKVQGRGGKAQALLNDAKAHDDAGAAVV 178 (275)
T ss_dssp HH-TTCSEEEEECS--GGGHHHHHHHHH-TTCCEE--EEEESCGGGTTC-----------CHHHHHHHHHHHHHTTCSEE
T ss_pred HH-cCCcEEEECCc--HHHHHHHHHHHH-cCCCeE--eeeccCceeecccCCeEEEeChHHHHHHHHHHHHHHHcCCcEE
Confidence 44 47776655544 345566666654 367854 33332 11100 01121 1111224667778888999998876
Q ss_pred eecCCCChHHHHHHHHHhh
Q 025860 220 GGCCRTTPNTIKGIYRTLS 238 (247)
Q Consensus 220 GGCCGt~P~hI~al~~~l~ 238 (247)
===| ...+.+++|.+.+.
T Consensus 179 vlE~-vp~~~a~~it~~l~ 196 (275)
T 1o66_A 179 LMEC-VLAELAKKVTETVS 196 (275)
T ss_dssp EEES-CCHHHHHHHHHHCS
T ss_pred EEec-CCHHHHHHHHHhCC
Confidence 5444 44677888887765
No 248
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=68.71 E-value=58 Score=28.26 Aligned_cols=94 Identities=11% Similarity=0.039 Sum_probs=60.8
Q ss_pred HHHHHhcCCCCEEEEecCC--------------CHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHH
Q 025860 78 RVQVLVESAPDLIAFETIP--------------NKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAE 143 (247)
Q Consensus 78 q~~~l~~~gvD~i~~ET~~--------------~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~ 143 (247)
-++.|.++|++.+-+|-.. +.+|+..-++++++.+ .+++|.--.+. .. ...++++++...
T Consensus 109 ~v~~l~~aGaagv~iED~~~~krcGh~~gk~l~~~~e~~~rI~Aa~~A~--~~~~I~ARtda--~~--~~g~~~ai~Ra~ 182 (305)
T 3ih1_A 109 TAVEMVEAKVAAVQIEDQQLPKKCGHLNGKKLVTTEELVQKIKAIKEVA--PSLYIVARTDA--RG--VEGLDEAIERAN 182 (305)
T ss_dssp HHHHHHHTTCSEEEEECBCSSCCTTCTTCCCBCCHHHHHHHHHHHHHHC--TTSEEEEEECC--HH--HHCHHHHHHHHH
T ss_pred HHHHHHHhCCcEEEECCCCCCcccCCCCCCcccCHHHHHHHHHHHHHcC--CCeEEEEeecc--cc--ccCHHHHHHHHH
Confidence 5777888999999999753 3457777777777763 56555544322 11 123677776654
Q ss_pred h--CCCCeEEEEcCC-ChhHHHHHHHHHHhhcCCCEEEEeC
Q 025860 144 S--CKRVVSVGINCT-PPRFISGLILIIKKVTAKPILIYPN 181 (247)
Q Consensus 144 ~--~~~~~avG~NC~-~p~~~~~~l~~l~~~~~~pl~vyPN 181 (247)
. ..|+++|=+-|. .++.+ +.+.+..+.|+++-+-
T Consensus 183 ay~eAGAD~i~~e~~~~~~~~----~~i~~~~~~P~~~n~~ 219 (305)
T 3ih1_A 183 AYVKAGADAIFPEALQSEEEF----RLFNSKVNAPLLANMT 219 (305)
T ss_dssp HHHHHTCSEEEETTCCSHHHH----HHHHHHSCSCBEEECC
T ss_pred HHHHcCCCEEEEcCCCCHHHH----HHHHHHcCCCEEEeec
Confidence 2 248999999997 44544 4444455789866543
No 249
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=68.68 E-value=11 Score=31.27 Aligned_cols=35 Identities=17% Similarity=0.208 Sum_probs=27.3
Q ss_pred HHHHHhcCCCCEEEEecCCCHHHHHHHHHHHHhhC
Q 025860 78 RVQVLVESAPDLIAFETIPNKIEAQAYAELLEEEN 112 (247)
Q Consensus 78 q~~~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~ 112 (247)
.++.+.+.|+|++-+=......-++.+++.+++.+
T Consensus 83 ~~~~~~~~gad~vtvh~~~G~~~l~~~~~~~~~~g 117 (228)
T 3m47_A 83 ICRATFKAGADAIIVHGFPGADSVRACLNVAEEMG 117 (228)
T ss_dssp HHHHHHHTTCSEEEEESTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHhCCCCEEEEeccCCHHHHHHHHHHHHhcC
Confidence 44556678999999877777777888899888765
No 250
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=68.67 E-value=17 Score=30.91 Aligned_cols=135 Identities=13% Similarity=0.107 Sum_probs=84.6
Q ss_pred CCHHHHHHHHHHHHHHHhcCCCCEEEEe----cCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHH
Q 025860 66 ITVETLKDFHRRRVQVLVESAPDLIAFE----TIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASI 141 (247)
Q Consensus 66 ~s~~e~~~~~~~q~~~l~~~gvD~i~~E----T~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~ 141 (247)
++...+++ .++..- ..+|++=|= ++..-+.++.-++.+++. ++++...=|+.+ ..+..| .+.+.++.
T Consensus 23 lg~~~~~d----~Le~~g-~yID~lKfg~Gt~~l~~~~~l~eki~l~~~~--gV~v~~GGTl~E-~~~~qg-~~~~yl~~ 93 (251)
T 1qwg_A 23 LPPKFVED----YLKVCG-DYIDFVKFGWGTSAVIDRDVVKEKINYYKDW--GIKVYPGGTLFE-YAYSKG-KFDEFLNE 93 (251)
T ss_dssp CCHHHHHH----HHHHHG-GGCSEEEECTTGGGGSCHHHHHHHHHHHHTT--TCEEEECHHHHH-HHHHTT-CHHHHHHH
T ss_pred CCHHHHHH----HHHHhh-hhcceEEecCceeeecCHHHHHHHHHHHHHc--CCeEECCcHHHH-HHHHcC-cHHHHHHH
Confidence 35555555 333333 468999776 333344488888999987 456552221111 112234 77788888
Q ss_pred HHhCCCCeEEEEcCC----ChhHHHHHHHHHHhhcCCCEEEEeCCCCcccccccccccCCCCChHHHHHHHHHHHHcCCe
Q 025860 142 AESCKRVVSVGINCT----PPRFISGLILIIKKVTAKPILIYPNSGEFYDADRKEWVQNTGVSDEDFVSYVSKWCEVGAS 217 (247)
Q Consensus 142 ~~~~~~~~avG~NC~----~p~~~~~~l~~l~~~~~~pl~vyPNaG~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 217 (247)
+++ .|.++|=|+-. +.+.-..+++.+++ .-+-|.+.-|..... .....+|+.|.+.+++++++||.
T Consensus 94 ~k~-lGf~~iEiS~G~i~l~~~~~~~~I~~~~~---~G~~v~~EvG~k~~~------~~~~~~~~~~I~~~~~~LeAGA~ 163 (251)
T 1qwg_A 94 CEK-LGFEAVEISDGSSDISLEERNNAIKRAKD---NGFMVLTEVGKKMPD------KDKQLTIDDRIKLINFDLDAGAD 163 (251)
T ss_dssp HHH-HTCCEEEECCSSSCCCHHHHHHHHHHHHH---TTCEEEEEECCSSHH------HHTTCCHHHHHHHHHHHHHHTCS
T ss_pred HHH-cCCCEEEECCCcccCCHHHHHHHHHHHHH---CCCEEeeeccccCCc------ccCCCCHHHHHHHHHHHHHCCCc
Confidence 887 68999999985 24555666666654 335567777752111 11236799999999999999987
Q ss_pred EE
Q 025860 218 LV 219 (247)
Q Consensus 218 iI 219 (247)
.|
T Consensus 164 ~V 165 (251)
T 1qwg_A 164 YV 165 (251)
T ss_dssp EE
T ss_pred EE
Confidence 75
No 251
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=68.66 E-value=64 Score=28.67 Aligned_cols=142 Identities=17% Similarity=0.094 Sum_probs=80.9
Q ss_pred HHHHHHHHHHHhcCCCCEEEEecCCCHH--HHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHh-CCCC
Q 025860 72 KDFHRRRVQVLVESAPDLIAFETIPNKI--EAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAES-CKRV 148 (247)
Q Consensus 72 ~~~~~~q~~~l~~~gvD~i~~ET~~~~~--E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~-~~~~ 148 (247)
.+..+..++...+.|+-+.+=|....++ ++..-.+.+|+..++.|++.++-.. .+..|.+++.+.+.+.. ..++
T Consensus 75 ~~in~~la~~a~~~G~~~~vGs~~~~l~~~~~~~s~~~vr~~ap~~~~~anlg~~---ql~~~~~~~~~~~av~~~~a~a 151 (368)
T 3vkj_A 75 GRINKIIAEVAEKFGIPMGVGSQRVAIEKAEARESFAIVRKVAPTIPIIANLGMP---QLVKGYGLKEFQDAIQMIEADA 151 (368)
T ss_dssp HHHHHHHHHHHHHHTCCEECCCCHHHHHCGGGSHHHHHHHHHCSSSCEEEEEEGG---GGGTTCCHHHHHHHHHHTTCSE
T ss_pred hHHHHHHHHHHHHhCCCeeeecchhccCCHHHHhhHHHHHHhCcCcceecCcCee---ecCCCCCHHHHHHHHHHhcCCC
Confidence 3445555666677888888655533221 2222234455544578999888642 23333556655444432 1355
Q ss_pred eEEEEcCC----Ch--h-----HHHHHHHHHHhhcCCCEEEEeCCCCcccccccccccCCCCChHHHHHHHHHHHHcCCe
Q 025860 149 VSVGINCT----PP--R-----FISGLILIIKKVTAKPILIYPNSGEFYDADRKEWVQNTGVSDEDFVSYVSKWCEVGAS 217 (247)
Q Consensus 149 ~avG~NC~----~p--~-----~~~~~l~~l~~~~~~pl~vyPNaG~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 217 (247)
..|-+|=. .| + .....|+.+++..++|+++.- .| |. .++ +.++...+.|+.
T Consensus 152 l~Ihln~~~~~~~p~g~~~~~~~~~~~i~~i~~~~~vPVivK~-vG---------~g----~s~----~~A~~l~~aGad 213 (368)
T 3vkj_A 152 IAVHLNPAQEVFQPEGEPEYQIYALEKLRDISKELSVPIIVKE-SG---------NG----ISM----ETAKLLYSYGIK 213 (368)
T ss_dssp EEEECCHHHHHHSSSCCCBCBTHHHHHHHHHHTTCSSCEEEEC-SS---------SC----CCH----HHHHHHHHTTCC
T ss_pred eEEEecchhhhhCCCCCchhhHHHHHHHHHHHHHcCCCEEEEe-CC---------CC----CCH----HHHHHHHhCCCC
Confidence 66666631 11 1 267788888888899998874 11 10 233 346678888977
Q ss_pred EE--eecCCCChHHHHHHH
Q 025860 218 LV--GGCCRTTPNTIKGIY 234 (247)
Q Consensus 218 iI--GGCCGt~P~hI~al~ 234 (247)
.| +|-.||+...|+..+
T Consensus 214 ~I~V~g~GGt~~~~iE~~R 232 (368)
T 3vkj_A 214 NFDTSGQGGTNWIAIEMIR 232 (368)
T ss_dssp EEECCCBTSBCHHHHHHHH
T ss_pred EEEEeCCCCCcccchhhhh
Confidence 64 555666555555444
No 252
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=68.53 E-value=21 Score=27.70 Aligned_cols=45 Identities=13% Similarity=0.268 Sum_probs=33.9
Q ss_pred CcHHHHHHHHHhCCCCeEEEEcCC---ChhHHHHHHHHHHhhc--CCCEEE
Q 025860 133 DSLLECASIAESCKRVVSVGINCT---PPRFISGLILIIKKVT--AKPILI 178 (247)
Q Consensus 133 ~~~~~~~~~~~~~~~~~avG~NC~---~p~~~~~~l~~l~~~~--~~pl~v 178 (247)
.+++++++.+.+ .+++.||+.|. ..+.+..+++.+++.. +.++++
T Consensus 56 ~p~e~lv~aa~~-~~~diV~lS~~~~~~~~~~~~~i~~L~~~g~~~i~v~v 105 (161)
T 2yxb_A 56 QTPEQVAMAAVQ-EDVDVIGVSILNGAHLHLMKRLMAKLRELGADDIPVVL 105 (161)
T ss_dssp CCHHHHHHHHHH-TTCSEEEEEESSSCHHHHHHHHHHHHHHTTCTTSCEEE
T ss_pred CCHHHHHHHHHh-cCCCEEEEEeechhhHHHHHHHHHHHHhcCCCCCEEEE
Confidence 688999998887 58999999996 2567788888887752 355544
No 253
>3ru6_A Orotidine 5'-phosphate decarboxylase; structural genomics, center for structural genomics of infec diseases (csgid), TIM-barrel; 1.80A {Campylobacter jejuni subsp}
Probab=68.31 E-value=51 Score=28.62 Aligned_cols=98 Identities=16% Similarity=0.159 Sum_probs=57.7
Q ss_pred HHHHHhcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCC---Cc---ccCCCcHHHHHHHHHh---CCCC
Q 025860 78 RVQVLVESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDG---VN---VVSGDSLLECASIAES---CKRV 148 (247)
Q Consensus 78 q~~~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~---~~---l~~G~~~~~~~~~~~~---~~~~ 148 (247)
.++.+.+.|+|++-+=......-++++++++++.+ +.|-++.++.-.. .. +.+ .++.+.+..+.. ..++
T Consensus 95 av~~~a~lGaD~vTVHa~~G~~~m~aa~e~a~~~~-~~~~llaVtvLTS~s~~~l~~l~~-~~~~e~V~~lA~~a~~~G~ 172 (303)
T 3ru6_A 95 ACEEVSKLGVDMINIHASAGKIAIQEVMTRLSKFS-KRPLVLAVSALTSFDEENFFSIYR-QKIEEAVINFSKISYENGL 172 (303)
T ss_dssp HHHHHHTTTCSEEEEEGGGCHHHHHHHHHHHTTSS-SCCEEEEECSCTTCCHHHHHHHHS-SCHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhcCCCEEEEeccCCHHHHHHHHHHHHhcC-CCceEEEEEEecCCCHHHHHHHHc-CCHHHHHHHHHHHHHHcCC
Confidence 34556778999999988888888888888887764 3566666653221 11 122 345554443321 2354
Q ss_pred eEEEEcCCChhHHHHHHHHHHhhc-CCCEEEEeCCCC
Q 025860 149 VSVGINCTPPRFISGLILIIKKVT-AKPILIYPNSGE 184 (247)
Q Consensus 149 ~avG~NC~~p~~~~~~l~~l~~~~-~~pl~vyPNaG~ 184 (247)
+ |+=|+.-+ ++.+++.. ...+++-|--+.
T Consensus 173 d--GvV~s~~E-----~~~IR~~~~~~fl~VTPGIr~ 202 (303)
T 3ru6_A 173 D--GMVCSVFE-----SKKIKEHTSSNFLTLTPGIRP 202 (303)
T ss_dssp S--EEECCTTT-----HHHHHHHSCTTSEEEECCCCT
T ss_pred C--EEEECHHH-----HHHHHHhCCCccEEECCCcCc
Confidence 4 67786433 23444443 345777885543
No 254
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=67.97 E-value=47 Score=27.16 Aligned_cols=120 Identities=11% Similarity=0.013 Sum_probs=65.5
Q ss_pred HHhcCCCCEEEEe-cCC-----CHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEEc
Q 025860 81 VLVESAPDLIAFE-TIP-----NKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGIN 154 (247)
Q Consensus 81 ~l~~~gvD~i~~E-T~~-----~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~N 154 (247)
..++.|+|.|=+. -++ +..++...++.+++.. + |+++-+-+... .+ +-+.+.++++.+.+ .|+++|=.|
T Consensus 78 ~A~~~Gad~Id~viN~g~~~~~~~~~~~~~i~~v~~a~-~-pv~vKvi~e~~-~l-~~~~~~~~a~~a~e-aGad~I~ts 152 (225)
T 1mzh_A 78 EAVRDGAQELDIVWNLSAFKSEKYDFVVEELKEIFRET-P-SAVHKVIVETP-YL-NEEEIKKAVEICIE-AGADFIKTS 152 (225)
T ss_dssp HHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHTC-T-TSEEEEECCGG-GC-CHHHHHHHHHHHHH-HTCSEEECC
T ss_pred HHHHcCCCEEEEEecHHHHhcCChHHHHHHHHHHHHHh-c-CceEEEEEeCC-CC-CHHHHHHHHHHHHH-hCCCEEEEC
Confidence 3456788887542 122 2344445566666654 3 88776633221 11 22235667776666 589999777
Q ss_pred CCC--hhHHHHHHHHHHhhcCCCEEEEeCCCCcccccccccccCCCCChHHHHHHHHHHHHcCCeEEeecC
Q 025860 155 CTP--PRFISGLILIIKKVTAKPILIYPNSGEFYDADRKEWVQNTGVSDEDFVSYVSKWCEVGASLVGGCC 223 (247)
Q Consensus 155 C~~--p~~~~~~l~~l~~~~~~pl~vyPNaG~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~iIGGCC 223 (247)
..- .......++.+++..+.++-+..|+|.. +++ .+.++++.|+..||-+-
T Consensus 153 tg~~~gga~~~~i~~v~~~v~~~ipVia~GGI~--------------t~~----da~~~l~aGA~~iG~s~ 205 (225)
T 1mzh_A 153 TGFAPRGTTLEEVRLIKSSAKGRIKVKASGGIR--------------DLE----TAISMIEAGADRIGTSS 205 (225)
T ss_dssp CSCSSSCCCHHHHHHHHHHHTTSSEEEEESSCC--------------SHH----HHHHHHHTTCSEEEESC
T ss_pred CCCCCCCCCHHHHHHHHHHhCCCCcEEEECCCC--------------CHH----HHHHHHHhCchHHHHcc
Confidence 631 1112345555655543334456666641 233 33445678999998653
No 255
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=67.74 E-value=62 Score=28.16 Aligned_cols=92 Identities=10% Similarity=-0.010 Sum_probs=59.0
Q ss_pred HHHHHhcCCCCEEEEecCC--------------CHHHH----HHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHH
Q 025860 78 RVQVLVESAPDLIAFETIP--------------NKIEA----QAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECA 139 (247)
Q Consensus 78 q~~~l~~~gvD~i~~ET~~--------------~~~E~----~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~ 139 (247)
-++.|.++|++.+-||-.. +.+|+ ++++++.++. +.+++|.--.+. .. ...+++++
T Consensus 108 ~v~~l~~aGaagv~iEDq~~~k~cgh~~gk~l~~~~e~~~rI~Aa~~A~~~~--~~d~~I~ARTDa--~~--~~gldeAi 181 (307)
T 3lye_A 108 TVEHYIRSGVAGAHLEDQILTKRCGHLSGKKVVSRDEYLVRIRAAVATKRRL--RSDFVLIARTDA--LQ--SLGYEECI 181 (307)
T ss_dssp HHHHHHHTTCCEEEECCBCCCC--------CBCCHHHHHHHHHHHHHHHHHT--TCCCEEEEEECC--HH--HHCHHHHH
T ss_pred HHHHHHHcCCeEEEEcCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhc--CCCeEEEEechh--hh--ccCHHHHH
Confidence 5777888999999999753 44553 3344443333 345665554432 22 23578888
Q ss_pred HHHHh--CCCCeEEEEcCC-ChhHHHHHHHHHHhhcCCCEEE
Q 025860 140 SIAES--CKRVVSVGINCT-PPRFISGLILIIKKVTAKPILI 178 (247)
Q Consensus 140 ~~~~~--~~~~~avG~NC~-~p~~~~~~l~~l~~~~~~pl~v 178 (247)
+.+.. ..|+|+|=+-|. +++.+..+.+.+. ++|+.+
T Consensus 182 ~Ra~ay~eAGAD~ifi~~~~~~~~~~~i~~~~~---~~Pv~~ 220 (307)
T 3lye_A 182 ERLRAARDEGADVGLLEGFRSKEQAAAAVAALA---PWPLLL 220 (307)
T ss_dssp HHHHHHHHTTCSEEEECCCSCHHHHHHHHHHHT---TSCBEE
T ss_pred HHHHHHHHCCCCEEEecCCCCHHHHHHHHHHcc---CCceeE
Confidence 87753 268999999996 6777777776663 477644
No 256
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=67.72 E-value=62 Score=29.49 Aligned_cols=84 Identities=13% Similarity=0.150 Sum_probs=51.7
Q ss_pred HHHHHHHHHh-cCCCCEEEEecC-------CCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhC
Q 025860 74 FHRRRVQVLV-ESAPDLIAFETI-------PNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESC 145 (247)
Q Consensus 74 ~~~~q~~~l~-~~gvD~i~~ET~-------~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~ 145 (247)
.|.+.++.++ +.+||.+++--. .....+..+++++++...++|+++.+. .|+...+..+.+.+
T Consensus 355 ~~~~al~~~l~dp~vd~vlv~~~~~~~Gg~~~~~~a~~i~~al~~~~~~kPvvv~~~--------~g~~~~~~~~~L~~- 425 (457)
T 2csu_A 355 DYYRTAKLLLQDPNVDMLIAICVVPTFAGMTLTEHAEGIIRAVKEVNNEKPVLAMFM--------AGYVSEKAKELLEK- 425 (457)
T ss_dssp HHHHHHHHHHHSTTCSEEEEEEECCCSTTCCSSHHHHHHHHHHHHHCCCCCEEEEEE--------CTTTTHHHHHHHHT-
T ss_pred HHHHHHHHHhcCCCCCEEEEEccccccccCCchhHHHHHHHHHHHhcCCCCEEEEeC--------CCcchHHHHHHHHh-
Confidence 3455666654 588999987432 113445667777776433689988653 35555777777765
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHh
Q 025860 146 KRVVSVGINCTPPRFISGLILIIKK 170 (247)
Q Consensus 146 ~~~~avG~NC~~p~~~~~~l~~l~~ 170 (247)
.++-.+ ..|+....++..+.+
T Consensus 426 ~Gip~~----~spe~Av~al~~l~~ 446 (457)
T 2csu_A 426 NGIPTY----ERPEDVASAAYALVE 446 (457)
T ss_dssp TTCCEE----SSHHHHHHHHHHHHH
T ss_pred CCCCcc----CCHHHHHHHHHHHHH
Confidence 454433 468777777666544
No 257
>3uhf_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich fold, isomerase; HET: DGL; 1.83A {Campylobacter jejuni} PDB: 3uho_A* 3uhp_A
Probab=67.33 E-value=15 Score=31.52 Aligned_cols=34 Identities=15% Similarity=0.219 Sum_probs=28.5
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHhcCCCCEEEEec
Q 025860 60 GNYGDAITVETLKDFHRRRVQVLVESAPDLIAFET 94 (247)
Q Consensus 60 g~y~~~~s~~e~~~~~~~q~~~l~~~gvD~i~~ET 94 (247)
.+|+. -+.+++.++-.+.++.|.+.|+|+|++=+
T Consensus 61 ~PYG~-ks~e~i~~~~~~~~~~L~~~g~d~IVIAC 94 (274)
T 3uhf_A 61 VPYGV-KDKDTIIKFCLEALDFFEQFQIDMLIIAC 94 (274)
T ss_dssp CCCTT-SCHHHHHHHHHHHHHHHTTSCCSEEEECC
T ss_pred CCCCC-CCHHHHHHHHHHHHHHHHHCCCCEEEEeC
Confidence 35654 68899999999999999999999998843
No 258
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=67.33 E-value=23 Score=29.93 Aligned_cols=64 Identities=20% Similarity=0.175 Sum_probs=44.6
Q ss_pred HHHHHhcCCCCEEEEe-cCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCC-CCeEEEEcC
Q 025860 78 RVQVLVESAPDLIAFE-TIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCK-RVVSVGINC 155 (247)
Q Consensus 78 q~~~l~~~gvD~i~~E-T~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~-~~~avG~NC 155 (247)
|+..+...|+|.+++= +.-+..+++..++.+++. ++-+++-+. +.+++-..+ . . +++.||+|=
T Consensus 115 qi~ea~~~GAD~ilLi~a~l~~~~l~~l~~~a~~l--Gl~~lvEv~-----------~~eE~~~A~-~-l~g~~iIGinn 179 (251)
T 1i4n_A 115 QVKLASSVGADAILIIARILTAEQIKEIYEAAEEL--GMDSLVEVH-----------SREDLEKVF-S-VIRPKIIGINT 179 (251)
T ss_dssp HHHHHHHTTCSEEEEEGGGSCHHHHHHHHHHHHTT--TCEEEEEEC-----------SHHHHHHHH-T-TCCCSEEEEEC
T ss_pred HHHHHHHcCCCEEEEecccCCHHHHHHHHHHHHHc--CCeEEEEeC-----------CHHHHHHHH-h-cCCCCEEEEeC
Confidence 4555667999998776 544667888899988887 466665552 445555443 3 5 899999997
Q ss_pred C
Q 025860 156 T 156 (247)
Q Consensus 156 ~ 156 (247)
.
T Consensus 180 r 180 (251)
T 1i4n_A 180 R 180 (251)
T ss_dssp B
T ss_pred c
Confidence 4
No 259
>3ldv_A Orotidine 5'-phosphate decarboxylase; structural genomics, infectious diseases; 1.77A {Vibrio cholerae o1 biovar el tor} PDB: 3uwq_A*
Probab=67.18 E-value=57 Score=27.53 Aligned_cols=123 Identities=10% Similarity=0.125 Sum_probs=72.2
Q ss_pred HHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEEcCC-ChhHHHHHHHHHHhh-cCCCE-
Q 025860 100 EAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGINCT-PPRFISGLILIIKKV-TAKPI- 176 (247)
Q Consensus 100 E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~NC~-~p~~~~~~l~~l~~~-~~~pl- 176 (247)
+-..+++.+++. +.+++.-+-+.|- |.+++.+++.+.+ .+++.+-+++. +++.|.++++..... .+.|.
T Consensus 66 ~G~~~v~~Lk~~--g~~VflDlK~~DI-----pnTv~~a~~~~~~-~gaD~vTVh~~~G~~~~~~a~~~~~~~g~~~~~l 137 (255)
T 3ldv_A 66 FGPDFVRELHKR--GFSVFLDLKFHDI-----PNTCSKAVKAAAE-LGVWMVNVHASGGERMMAASREILEPYGKERPLL 137 (255)
T ss_dssp HHHHHHHHHHHT--TCCEEEEEEECSC-----HHHHHHHHHHHHH-TTCSEEEEEGGGCHHHHHHHHHHHGGGGGGSCEE
T ss_pred hCHHHHHHHHhc--CCCEEEEEecccc-----hhHHHHHHHHHHh-cCCCEEEEeccCCHHHHHHHHHHHhhcCCCCceE
Confidence 344566677765 5899988887663 4556667777766 58999999997 777788887776543 23442
Q ss_pred -EEEeCCCCcccccccccccCC-CCCh-HHHHHHHHHHHHcCCeEEeecCCCChHHHHHHHHHhh
Q 025860 177 -LIYPNSGEFYDADRKEWVQNT-GVSD-EDFVSYVSKWCEVGASLVGGCCRTTPNTIKGIYRTLS 238 (247)
Q Consensus 177 -~vyPNaG~~~d~~~~~~~~~~-~~~~-~~~~~~~~~~~~~G~~iIGGCCGt~P~hI~al~~~l~ 238 (247)
+|.-=... +. ..|.... ..+. +...+.++.+.+.|+ .|=-|+ |.+++.||+.+.
T Consensus 138 i~VtvLTS~--s~--~~l~~~g~~~~~~~~V~~~A~~a~~aG~--~GvV~s--a~e~~~iR~~~g 194 (255)
T 3ldv_A 138 IGVTVLTSM--ES--ADLQGIGILSAPQDHVLRLATLTKNAGL--DGVVCS--AQEASLLKQHLG 194 (255)
T ss_dssp EEECSCTTC--CH--HHHHHTTCCSCHHHHHHHHHHHHHHTTC--SEEECC--HHHHHHHHHHHC
T ss_pred EEEEEEecC--CH--HHHHhcCCCCCHHHHHHHHHHHHHHcCC--CEEEEC--HHHHHHHHHhcC
Confidence 22221111 11 1232111 0122 234455555666665 343455 778888887764
No 260
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=67.12 E-value=39 Score=28.58 Aligned_cols=91 Identities=13% Similarity=0.046 Sum_probs=54.6
Q ss_pred HHHHHHHHhcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHh-CCCCeEEEE
Q 025860 75 HRRRVQVLVESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAES-CKRVVSVGI 153 (247)
Q Consensus 75 ~~~q~~~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~-~~~~~avG~ 153 (247)
+..-++.+.++|||.+++=.+| ++|.....+.+++.+ +..+.-++ .-++. +-++.+.+ ..+... -+
T Consensus 105 ~e~F~~~~~~aGvdG~IipDLP-~eE~~~~~~~~~~~G--l~~I~lva--------P~t~~-eRi~~ia~~a~gFiY-~V 171 (252)
T 3tha_A 105 LEKFVKKAKSLGICALIVPELS-FEESDDLIKECERYN--IALITLVS--------VTTPK-ERVKKLVKHAKGFIY-LL 171 (252)
T ss_dssp HHHHHHHHHHTTEEEEECTTCC-GGGCHHHHHHHHHTT--CEECEEEE--------TTSCH-HHHHHHHTTCCSCEE-EE
T ss_pred HHHHHHHHHHcCCCEEEeCCCC-HHHHHHHHHHHHHcC--CeEEEEeC--------CCCcH-HHHHHHHHhCCCeEE-EE
Confidence 3445555678999999998887 577888888888875 44322221 11222 33333433 233322 23
Q ss_pred cC---CC-----hhHHHHHHHHHHhhcCCCEEE
Q 025860 154 NC---TP-----PRFISGLILIIKKVTAKPILI 178 (247)
Q Consensus 154 NC---~~-----p~~~~~~l~~l~~~~~~pl~v 178 (247)
.- ++ ++.+..+++++++..+.|+++
T Consensus 172 s~~GvTG~~~~~~~~~~~~v~~vr~~~~~Pv~v 204 (252)
T 3tha_A 172 ASIGITGTKSVEEAILQDKVKEIRSFTNLPIFV 204 (252)
T ss_dssp CCSCSSSCSHHHHHHHHHHHHHHHTTCCSCEEE
T ss_pred ecCCCCCcccCCCHHHHHHHHHHHHhcCCcEEE
Confidence 21 22 344677888888888889866
No 261
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=66.76 E-value=53 Score=27.05 Aligned_cols=92 Identities=10% Similarity=0.054 Sum_probs=55.2
Q ss_pred HHHHHHHhcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcC-CCc-ccCCCcHHHHHHHHHhCCCCeEEEE
Q 025860 76 RRRVQVLVESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKD-GVN-VVSGDSLLECASIAESCKRVVSVGI 153 (247)
Q Consensus 76 ~~q~~~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~-~~~-l~~G~~~~~~~~~~~~~~~~~avG~ 153 (247)
.+++++..++|+..|-.. +++++ +.+|+.. ++|++ ...-++ .+. ..-+.+++++-+ +.. .|++.|-+
T Consensus 39 ~~~A~a~~~~Ga~~i~~~---~~~~i----~~ir~~v-~~Pvi-g~~k~d~~~~~~~I~~~~~~i~~-~~~-~Gad~V~l 107 (232)
T 3igs_A 39 AAMALAAEQAGAVAVRIE---GIDNL----RMTRSLV-SVPII-GIIKRDLDESPVRITPFLDDVDA-LAQ-AGAAIIAV 107 (232)
T ss_dssp HHHHHHHHHTTCSEEEEE---SHHHH----HHHHTTC-CSCEE-EECBCCCSSCCCCBSCSHHHHHH-HHH-HTCSEEEE
T ss_pred HHHHHHHHHCCCeEEEEC---CHHHH----HHHHHhc-CCCEE-EEEeecCCCcceEeCccHHHHHH-HHH-cCCCEEEE
Confidence 347777888999998875 34443 3355543 68984 332222 110 112235556544 444 48999999
Q ss_pred cCC---ChhHHHHHHHHHHhhcCCCEEEE
Q 025860 154 NCT---PPRFISGLILIIKKVTAKPILIY 179 (247)
Q Consensus 154 NC~---~p~~~~~~l~~l~~~~~~pl~vy 179 (247)
+++ .|+.+..+++.+++. +.++++-
T Consensus 108 ~~~~~~~p~~l~~~i~~~~~~-g~~v~~~ 135 (232)
T 3igs_A 108 DGTARQRPVAVEALLARIHHH-HLLTMAD 135 (232)
T ss_dssp ECCSSCCSSCHHHHHHHHHHT-TCEEEEE
T ss_pred CccccCCHHHHHHHHHHHHHC-CCEEEEe
Confidence 996 377888888887664 5555543
No 262
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=66.61 E-value=67 Score=28.18 Aligned_cols=109 Identities=18% Similarity=0.136 Sum_probs=65.1
Q ss_pred HHHHHHHHHHHHHHHhcCCCCEEEEecC-C--------------C---HHHHHHHHHHHHhhCCCCcEEEEEEEcCC---
Q 025860 68 VETLKDFHRRRVQVLVESAPDLIAFETI-P--------------N---KIEAQAYAELLEEENIKIPAWFSFNSKDG--- 126 (247)
Q Consensus 68 ~~e~~~~~~~q~~~l~~~gvD~i~~ET~-~--------------~---~~E~~aa~~~~~~~~~~~pv~is~~~~~~--- 126 (247)
.+...++|.++++ .|+-+|+.|-. . + +...+.+.+++++. +.++++++.=...
T Consensus 36 t~~~~~yy~~rA~----gG~Gliite~~~V~~~g~~~~~~~gi~~d~~i~~~~~~~~~vh~~--G~~i~~QL~H~Gr~~~ 109 (343)
T 3kru_A 36 NDWHIVHYATRAI----GGVGLIMQEATAVESRGRITDHDLGIWNDEQVKELKKIVDICKAN--GAVMGIQLAHAGRKCN 109 (343)
T ss_dssp CHHHHHHHHHHHH----TTCSEEEEEEEESSGGGCSSTTSCBCSSHHHHHHHHHHHHHHHHT--TCEEEEEEECCGGGCC
T ss_pred Cceeeeeeehhhc----cceeeeeehhhhhhhcCccccccccccCHHHHHHHHHHHHHHhcC--CceEeeehhhccCccC
Confidence 3788899998876 78888988832 1 1 22344566677766 4677777752110
Q ss_pred --C------------------cccCCCcH-------HHHHHHHHhCCCCeEEEEcCCC---------h------------
Q 025860 127 --V------------------NVVSGDSL-------LECASIAESCKRVVSVGINCTP---------P------------ 158 (247)
Q Consensus 127 --~------------------~l~~G~~~-------~~~~~~~~~~~~~~avG~NC~~---------p------------ 158 (247)
+ +-.+-+.+ .++++.+.+ .|.|+|=|||.+ |
T Consensus 110 ~~g~~~~apS~i~~~~~~~~p~~mt~~eI~~ii~~f~~AA~~a~~-aGfDgVEih~ahGYLl~qFlsp~~N~R~D~yGGs 188 (343)
T 3kru_A 110 ISYEDVVGPSPIKAGDRYKLPRELSVEEIKSIVKAFGEAAKRANL-AGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGNS 188 (343)
T ss_dssp CTTSCCEESSSCCSSTTSCCCEECCHHHHHHHHHHHHHHHHHHHH-HTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSS
T ss_pred cchhhccCCCcCCCCccccCchhcCHHHHHHHHHHHHHHHhhccc-cCCceEEEecccchhHHHhhcccccccchhhccc
Confidence 0 00011112 233444444 589999999531 1
Q ss_pred -----hHHHHHHHHHHhhc--CCCEEEEeCCC
Q 025860 159 -----RFISGLILIIKKVT--AKPILIYPNSG 183 (247)
Q Consensus 159 -----~~~~~~l~~l~~~~--~~pl~vyPNaG 183 (247)
..+.++++.+++.. +.||++.-+..
T Consensus 189 lenR~rf~~eiv~aVr~avg~d~pv~vRls~~ 220 (343)
T 3kru_A 189 IENRARFLIEVIDEVRKNWPENKPIFVRVSAD 220 (343)
T ss_dssp HHHHTHHHHHHHHHHHHTSCTTSCEEEEEECC
T ss_pred hHhHHHHHHHHHHHHHhcCCccCCeEEEeech
Confidence 24466777777776 67999887764
No 263
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=66.56 E-value=25 Score=26.41 Aligned_cols=38 Identities=8% Similarity=-0.106 Sum_probs=24.3
Q ss_pred CcHHHHHHHHHhCCCCeEEEEcCCC---hhHHHHHHHHHHhh
Q 025860 133 DSLLECASIAESCKRVVSVGINCTP---PRFISGLILIIKKV 171 (247)
Q Consensus 133 ~~~~~~~~~~~~~~~~~avG~NC~~---p~~~~~~l~~l~~~ 171 (247)
.+++++++.+.+ .++++||+.|+. ...+.++++.+++.
T Consensus 41 ~p~e~~v~~a~~-~~~d~v~lS~~~~~~~~~~~~~i~~l~~~ 81 (137)
T 1ccw_A 41 SPQELFIKAAIE-TKADAILVSSLYGQGEIDCKGLRQKCDEA 81 (137)
T ss_dssp ECHHHHHHHHHH-HTCSEEEEEECSSTHHHHHTTHHHHHHHT
T ss_pred CCHHHHHHHHHh-cCCCEEEEEecCcCcHHHHHHHHHHHHhc
Confidence 466677776665 467888887752 34456666666654
No 264
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=66.45 E-value=94 Score=32.04 Aligned_cols=151 Identities=10% Similarity=0.027 Sum_probs=80.8
Q ss_pred HHHHHhcCCCCEEEEe-----cCC------CHHHHHHHHHHHHhhCCCCcEEEEEEEcC-C--Cccc-CCCcHHHHHHHH
Q 025860 78 RVQVLVESAPDLIAFE-----TIP------NKIEAQAYAELLEEENIKIPAWFSFNSKD-G--VNVV-SGDSLLECASIA 142 (247)
Q Consensus 78 q~~~l~~~gvD~i~~E-----T~~------~~~E~~aa~~~~~~~~~~~pv~is~~~~~-~--~~l~-~G~~~~~~~~~~ 142 (247)
.++.|.+.|||++-+| |++ +-.+-..+.+ +++.-++.++ ..+ +.. + +.+. .+....+-++.+
T Consensus 578 ia~~L~~~gv~~~~iE~~gga~f~~~~~f~~~~p~e~l~~-~~~~~~~~~~-~~l-~R~~n~vg~~~~~~~~~~~~i~~a 654 (1165)
T 2qf7_A 578 IAGTYSHALPNLLSLECWGGATFDVSMRFLTEDPWERLAL-IREGAPNLLL-QML-LRGANGVGYTNYPDNVVKYFVRQA 654 (1165)
T ss_dssp HHHHHHHHCTTCSEEEEEETTHHHHHHHHHCCCHHHHHHH-HHHHCTTSEE-EEE-EETTTBTCSSCCCHHHHHHHHHHH
T ss_pred HHHHHHHhCCCceEEEeCCCCccHHHHhhcCCCHHHHHHH-HHHHchhhHH-HHH-hccccccccccCCchhHHHHHHHH
Confidence 5666777899998889 544 2222222222 2332223333 222 221 1 1110 111123344444
Q ss_pred HhCCCCeEEEEcCC--ChhHHHHHHHHHHhhcCCCEEEEeCC-CCcccccccccccCCCCChHHHHHHHHHHHHcCCeEE
Q 025860 143 ESCKRVVSVGINCT--PPRFISGLILIIKKVTAKPILIYPNS-GEFYDADRKEWVQNTGVSDEDFVSYVSKWCEVGASLV 219 (247)
Q Consensus 143 ~~~~~~~avG~NC~--~p~~~~~~l~~l~~~~~~pl~vyPNa-G~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~iI 219 (247)
.+ .+++.+.+-.+ ..+.+...++..++.- ..+-++-.. +.+.|+. .+ ..+++++.+.++...+.|+..|
T Consensus 655 ~~-~g~d~irif~sl~~~~~~~~~i~~~~~~g-~~v~~~i~~~~~~~d~~----r~--~~~~~~~~~~~~~~~~~Ga~~i 726 (1165)
T 2qf7_A 655 AK-GGIDLFRVFDCLNWVENMRVSMDAIAEEN-KLCEAAICYTGDILNSA----RP--KYDLKYYTNLAVELEKAGAHII 726 (1165)
T ss_dssp HH-HTCCEEEEECTTCCGGGGHHHHHHHHHTT-CEEEEEEECCSCTTCTT----SG--GGCHHHHHHHHHHHHHTTCSEE
T ss_pred Hh-cCcCEEEEEeeHHHHHHHHHHHHHHHhcc-ceEEEEEEEeccccCCC----CC--CCCHHHHHHHHHHHHHcCCCEE
Confidence 44 36777666443 5667777777776642 322222111 1112221 11 1358889999999999999998
Q ss_pred eecC---CCChHHHHHHHHHhhC
Q 025860 220 GGCC---RTTPNTIKGIYRTLSN 239 (247)
Q Consensus 220 GGCC---Gt~P~hI~al~~~l~~ 239 (247)
.=|= ..+|..+..|-+.|+.
T Consensus 727 ~l~DT~G~~~P~~~~~lv~~l~~ 749 (1165)
T 2qf7_A 727 AVKDMAGLLKPAAAKVLFKALRE 749 (1165)
T ss_dssp EEEETTCCCCHHHHHHHHHHHHH
T ss_pred EEeCccCCcCHHHHHHHHHHHHH
Confidence 7653 4579999888777654
No 265
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=66.18 E-value=9.6 Score=33.26 Aligned_cols=61 Identities=11% Similarity=0.114 Sum_probs=39.3
Q ss_pred HHHHhcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEEcC
Q 025860 79 VQVLVESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGINC 155 (247)
Q Consensus 79 ~~~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~NC 155 (247)
++..+++|+|.|.+.+++ +.+++.+++.++ + +.++.+| .|.+++.+.+.. + .++|.|++-.
T Consensus 222 ~~eAl~aGaD~I~LDn~~-~~~l~~av~~i~--~-~v~ieaS----------GGI~~~~i~~~a-~-tGVD~isvG~ 282 (298)
T 3gnn_A 222 LRTALAHGARSVLLDNFT-LDMMRDAVRVTE--G-RAVLEVS----------GGVNFDTVRAIA-E-TGVDRISIGA 282 (298)
T ss_dssp HHHHHHTTCEEEEEESCC-HHHHHHHHHHHT--T-SEEEEEE----------SSCSTTTHHHHH-H-TTCSEEECGG
T ss_pred HHHHHHcCCCEEEECCCC-HHHHHHHHHHhC--C-CCeEEEE----------cCCCHHHHHHHH-H-cCCCEEEECC
Confidence 333455899999999976 788888877653 1 3333332 345555555543 3 5899988765
No 266
>3ixl_A Amdase, arylmalonate decarboxylase; enantioselective decarboxylation, lyase; HET: CME PAC; 1.45A {Bordetella bronchiseptica} PDB: 3ixm_A 2vlb_A 3dg9_A 3ip8_A* 3dtv_A* 3eis_A*
Probab=65.90 E-value=56 Score=27.00 Aligned_cols=150 Identities=11% Similarity=0.014 Sum_probs=82.3
Q ss_pred CCHHHHHHH---HHHHHHHHhcCCCCEEEEe-cCCCH----HHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHH
Q 025860 66 ITVETLKDF---HRRRVQVLVESAPDLIAFE-TIPNK----IEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLE 137 (247)
Q Consensus 66 ~s~~e~~~~---~~~q~~~l~~~gvD~i~~E-T~~~~----~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~ 137 (247)
.+.+++.++ ..+-++.|.++|+|+|++= |-.+. .-.+.+.+.+++.. ++|++- +...
T Consensus 43 ~t~e~l~~~~~~l~~aa~~L~~ag~d~i~~aCtsas~~~G~~~~~~~~~~l~~~~-~iPv~~--------------~~~A 107 (240)
T 3ixl_A 43 VTPEGYDAVIESVVDHARRLQKQGAAVVSLMCTSLSFYRGAAFNAALTVAMREAT-GLPCTT--------------MSTA 107 (240)
T ss_dssp SSHHHHHHHGGGHHHHHHHHHHTTEEEEEECCHHHHHTTCHHHHHHHHHHHHHHH-SSCEEE--------------HHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhccCCCCEEEECCcHHHHhcccchHHHHHHHHHhcc-CCCEEC--------------HHHH
Confidence 677877776 3556777888999999986 22122 11233444455543 688871 2234
Q ss_pred HHHHHHhCCCCeEEEEcCCChhHHHHHHHHHHhhcCCCEEEEeCCCCcccccccccccCCCCChHHHHHHHHH-H-HHcC
Q 025860 138 CASIAESCKRVVSVGINCTPPRFISGLILIIKKVTAKPILIYPNSGEFYDADRKEWVQNTGVSDEDFVSYVSK-W-CEVG 215 (247)
Q Consensus 138 ~~~~~~~~~~~~avG~NC~~p~~~~~~l~~l~~~~~~pl~vyPNaG~~~d~~~~~~~~~~~~~~~~~~~~~~~-~-~~~G 215 (247)
.+..+.. .++.-||+=.+-...+...++..-...+..+......|. .+.. ..+ ..+++.+.+.+++ . ...|
T Consensus 108 ~~~al~~-~g~~rvglltpy~~~~~~~~~~~l~~~Giev~~~~~~~~-~~~~-~~~----~~~~~~~~~~~~~~l~~~~~ 180 (240)
T 3ixl_A 108 VLNGLRA-LGVRRVALATAYIDDVNERLAAFLAEESLVPTGCRSLGI-TGVE-AMA----RVDTATLVDLCVRAFEAAPD 180 (240)
T ss_dssp HHHHHHH-TTCSEEEEEESSCHHHHHHHHHHHHHTTCEEEEEEECCC-CCHH-HHH----TCCHHHHHHHHHHHHHTSTT
T ss_pred HHHHHHH-hCCCEEEEEeCChHHHHHHHHHHHHHCCCEEeccccCCC-CCcc-hhh----cCCHHHHHHHHHHHhhcCCC
Confidence 4555554 466777777654444444444332233555443333332 2211 011 2468889999888 5 4445
Q ss_pred --CeEEeecCCCChH-HHHHHHHHhh
Q 025860 216 --ASLVGGCCRTTPN-TIKGIYRTLS 238 (247)
Q Consensus 216 --~~iIGGCCGt~P~-hI~al~~~l~ 238 (247)
+-++| |-.-.+- .|..+.+.+.
T Consensus 181 adaivL~-CT~l~~l~~i~~le~~lg 205 (240)
T 3ixl_A 181 SDGILLS-SGGLLTLDAIPEVERRLG 205 (240)
T ss_dssp CSEEEEE-CTTSCCTTHHHHHHHHHS
T ss_pred CCEEEEe-CCCCchhhhHHHHHHHhC
Confidence 45566 7665433 4666666553
No 267
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=65.87 E-value=59 Score=27.38 Aligned_cols=97 Identities=12% Similarity=0.043 Sum_probs=55.8
Q ss_pred HHHHHhcCCCCEEEEecCC--------CHHHHHHHHHHHHhhC--CCCcEEEEEEEcCC--CcccCCCcHHHHHHHHHh-
Q 025860 78 RVQVLVESAPDLIAFETIP--------NKIEAQAYAELLEEEN--IKIPAWFSFNSKDG--VNVVSGDSLLECASIAES- 144 (247)
Q Consensus 78 q~~~l~~~gvD~i~~ET~~--------~~~E~~aa~~~~~~~~--~~~pv~is~~~~~~--~~l~~G~~~~~~~~~~~~- 144 (247)
-++.|.++|++.+-+|-.. +.+|+..-++++++.- .+.|++|.--...- ++....+.++++++....
T Consensus 98 ~~~~l~~aGa~gv~iEd~~~~~~k~l~~~~e~~~~I~a~~~a~~~~g~~~~v~aRtd~~~~g~~~~~~~~~~ai~ra~a~ 177 (255)
T 2qiw_A 98 LIAQILEAGAVGINVEDVVHSEGKRVREAQEHADYIAAARQAADVAGVDVVINGRTDAVKLGADVFEDPMVEAIKRIKLM 177 (255)
T ss_dssp HHHHHHHTTCCEEEECSEEGGGTTEECCHHHHHHHHHHHHHHHHHHTCCCEEEEEECHHHHCTTTSSSHHHHHHHHHHHH
T ss_pred HHHHHHHcCCcEEEECCCCCCCCCcccCHHHHHHHHHHHHHHHHhcCCCeEEEEEechhhccCCcchHHHHHHHHHHHHH
Confidence 4566777999999999874 2345555555444430 03576655544320 100001236777665532
Q ss_pred -CCCCeEEEEcCCC-hhHHHHHHHHHHhhcCCCEEE
Q 025860 145 -CKRVVSVGINCTP-PRFISGLILIIKKVTAKPILI 178 (247)
Q Consensus 145 -~~~~~avG~NC~~-p~~~~~~l~~l~~~~~~pl~v 178 (247)
..|+++|=+-|.. ++ .++.+.+..+.|+.+
T Consensus 178 ~eAGAd~i~~e~~~~~~----~~~~i~~~~~~P~n~ 209 (255)
T 2qiw_A 178 EQAGARSVYPVGLSTAE----QVERLVDAVSVPVNI 209 (255)
T ss_dssp HHHTCSEEEECCCCSHH----HHHHHHTTCSSCBEE
T ss_pred HHcCCcEEEEcCCCCHH----HHHHHHHhCCCCEEE
Confidence 2589999999973 44 445555556788643
No 268
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=65.56 E-value=69 Score=27.94 Aligned_cols=145 Identities=14% Similarity=0.094 Sum_probs=82.3
Q ss_pred CCHHHHHHHHHHHHHHHhcCCCCEEEEec-----CCC---------HHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccC
Q 025860 66 ITVETLKDFHRRRVQVLVESAPDLIAFET-----IPN---------KIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVS 131 (247)
Q Consensus 66 ~s~~e~~~~~~~q~~~l~~~gvD~i~~ET-----~~~---------~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~ 131 (247)
.+.++..+ .++.|.++|+|.| |- +|. ..+.. .++.+++..++.|+.+ +...
T Consensus 27 ~~~e~k~~----i~~~L~~~Gvd~I--EvG~~~g~p~ssp~~g~~~~~~~e-~l~~i~~~~~~~~i~~-l~~p------- 91 (345)
T 1nvm_A 27 YTLDDVRA----IARALDKAKVDSI--EVAHGDGLQGSSFNYGFGRHTDLE-YIEAVAGEISHAQIAT-LLLP------- 91 (345)
T ss_dssp CCHHHHHH----HHHHHHHHTCSEE--ECSCTTSTTCCBTTTBCCSSCHHH-HHHHHHTTCSSSEEEE-EECB-------
T ss_pred CCHHHHHH----HHHHHHHcCCCEE--EEecCCCCCCCCCcccCCCCCHHH-HHHHHHhhCCCCEEEE-EecC-------
Confidence 57777666 5566677899987 76 321 11222 3434444322445443 3222
Q ss_pred CCcHHHHHHHHHhCCCCeEEEEc--CCChhHHHHHHHHHHhhcCCCEEEEeCCCCcccccccccccCCCCChHHHHHHHH
Q 025860 132 GDSLLECASIAESCKRVVSVGIN--CTPPRFISGLILIIKKVTAKPILIYPNSGEFYDADRKEWVQNTGVSDEDFVSYVS 209 (247)
Q Consensus 132 G~~~~~~~~~~~~~~~~~avG~N--C~~p~~~~~~l~~l~~~~~~pl~vyPNaG~~~d~~~~~~~~~~~~~~~~~~~~~~ 209 (247)
|....+-++.+.+ .+++.|-+. |+..+.+.+.++..++. ...+.+++- +. + ..+++.+.+.++
T Consensus 92 ~~~~~~~i~~a~~-aGvd~v~I~~~~s~~~~~~~~i~~ak~~-G~~v~~~~~-----~a------~--~~~~e~~~~ia~ 156 (345)
T 1nvm_A 92 GIGSVHDLKNAYQ-AGARVVRVATHCTEADVSKQHIEYARNL-GMDTVGFLM-----MS------H--MIPAEKLAEQGK 156 (345)
T ss_dssp TTBCHHHHHHHHH-HTCCEEEEEEETTCGGGGHHHHHHHHHH-TCEEEEEEE-----ST------T--SSCHHHHHHHHH
T ss_pred CcccHHHHHHHHh-CCcCEEEEEEeccHHHHHHHHHHHHHHC-CCEEEEEEE-----eC------C--CCCHHHHHHHHH
Confidence 1111334444444 366665544 34456777777776654 444544441 11 0 135788889999
Q ss_pred HHHHcCCeEEeec--CC-CChHHHHHHHHHhhCC
Q 025860 210 KWCEVGASLVGGC--CR-TTPNTIKGIYRTLSNR 240 (247)
Q Consensus 210 ~~~~~G~~iIGGC--CG-t~P~hI~al~~~l~~~ 240 (247)
...+.|+.+|.=| -| .+|..++.+-+.+++.
T Consensus 157 ~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~ 190 (345)
T 1nvm_A 157 LMESYGATCIYMADSGGAMSMNDIRDRMRAFKAV 190 (345)
T ss_dssp HHHHHTCSEEEEECTTCCCCHHHHHHHHHHHHHH
T ss_pred HHHHCCCCEEEECCCcCccCHHHHHHHHHHHHHh
Confidence 9999999887643 22 3699998887777643
No 269
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=65.50 E-value=37 Score=26.79 Aligned_cols=82 Identities=11% Similarity=0.036 Sum_probs=46.0
Q ss_pred HHHHhcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEEcCCCh
Q 025860 79 VQVLVESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGINCTPP 158 (247)
Q Consensus 79 ~~~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~NC~~p 158 (247)
++...+.|+|++ +-.... ..+++.+++. ++|++..+ .+..++...+ + .|++.|.++-..+
T Consensus 76 ~~~a~~~Gad~i-v~~~~~----~~~~~~~~~~--g~~vi~g~-----------~t~~e~~~a~-~-~Gad~vk~~~~~~ 135 (205)
T 1wa3_A 76 CRKAVESGAEFI-VSPHLD----EEISQFCKEK--GVFYMPGV-----------MTPTELVKAM-K-LGHTILKLFPGEV 135 (205)
T ss_dssp HHHHHHHTCSEE-ECSSCC----HHHHHHHHHH--TCEEECEE-----------CSHHHHHHHH-H-TTCCEEEETTHHH
T ss_pred HHHHHHcCCCEE-EcCCCC----HHHHHHHHHc--CCcEECCc-----------CCHHHHHHHH-H-cCCCEEEEcCccc
Confidence 444555799999 443332 2355666766 57887522 2345555544 3 5899999875322
Q ss_pred hHHHHHHHHHHhhc-CCCEEEEeCCC
Q 025860 159 RFISGLILIIKKVT-AKPILIYPNSG 183 (247)
Q Consensus 159 ~~~~~~l~~l~~~~-~~pl~vyPNaG 183 (247)
. -...++.+.... +.| +.+-+|
T Consensus 136 ~-g~~~~~~l~~~~~~~p--via~GG 158 (205)
T 1wa3_A 136 V-GPQFVKAMKGPFPNVK--FVPTGG 158 (205)
T ss_dssp H-HHHHHHHHHTTCTTCE--EEEBSS
T ss_pred c-CHHHHHHHHHhCCCCc--EEEcCC
Confidence 2 235566665544 444 455454
No 270
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=65.33 E-value=57 Score=29.03 Aligned_cols=98 Identities=13% Similarity=0.028 Sum_probs=54.4
Q ss_pred HHHHHhcCCCCEEE-EecCCCH--------------HHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHH
Q 025860 78 RVQVLVESAPDLIA-FETIPNK--------------IEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIA 142 (247)
Q Consensus 78 q~~~l~~~gvD~i~-~ET~~~~--------------~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~ 142 (247)
.++++.++|+|.|- |=..++. +.+..+++.+++.+ .. +.|.+.+.++. +=+-+.++++.+
T Consensus 92 a~~al~~ag~~~v~if~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~a~~~g--~~--v~~~~ed~~r~-~~~~~~~~~~~~ 166 (370)
T 3rmj_A 92 AGEAVAPAPKKRIHTFIATSPIHMEYKLKMKPKQVIEAAVKAVKIAREYT--DD--VEFSCEDALRS-EIDFLAEICGAV 166 (370)
T ss_dssp HHHHHTTSSSEEEEEEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHTTTC--SC--EEEEEETGGGS-CHHHHHHHHHHH
T ss_pred HHHHHhhCCCCEEEEEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHHcC--CE--EEEecCCCCcc-CHHHHHHHHHHH
Confidence 45566667887663 3333332 22333445555543 23 45666654443 223344555555
Q ss_pred HhCCCCeEEEEcCC----ChhHHHHHHHHHHhhcC----CCEEEEeC
Q 025860 143 ESCKRVVSVGINCT----PPRFISGLILIIKKVTA----KPILIYPN 181 (247)
Q Consensus 143 ~~~~~~~avG~NC~----~p~~~~~~l~~l~~~~~----~pl~vyPN 181 (247)
.+ .|++.|.+-=+ .|..+..+++.+++... .||.+...
T Consensus 167 ~~-~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~~~~l~~H~H 212 (370)
T 3rmj_A 167 IE-AGATTINIPDTVGYSIPYKTEEFFRELIAKTPNGGKVVWSAHCH 212 (370)
T ss_dssp HH-HTCCEEEEECSSSCCCHHHHHHHHHHHHHHSTTGGGSEEEEECB
T ss_pred HH-cCCCEEEecCccCCcCHHHHHHHHHHHHHhCCCcCceEEEEEeC
Confidence 55 47777766554 38888888888877653 56766653
No 271
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=65.32 E-value=11 Score=32.07 Aligned_cols=19 Identities=11% Similarity=0.011 Sum_probs=13.0
Q ss_pred cHHHHHHHHHhCCCCeEEEEc
Q 025860 134 SLLECASIAESCKRVVSVGIN 154 (247)
Q Consensus 134 ~~~~~~~~~~~~~~~~avG~N 154 (247)
++.++... .+ .+++.|++|
T Consensus 134 ~~~~~~~a-~~-~Gad~I~v~ 152 (297)
T 2zbt_A 134 NLGEALRR-IA-EGAAMIRTK 152 (297)
T ss_dssp SHHHHHHH-HH-TTCSEEEEC
T ss_pred CHHHHHHH-HH-cCCCEEEEc
Confidence 45666654 34 588999888
No 272
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=65.05 E-value=20 Score=31.43 Aligned_cols=97 Identities=10% Similarity=-0.016 Sum_probs=61.3
Q ss_pred HHHHhcCCCCEEEEec-CCC--------------HHHHHHHHHHHHhhCCCCcEEEEEEEcC---CCcccCCCcHHHHHH
Q 025860 79 VQVLVESAPDLIAFET-IPN--------------KIEAQAYAELLEEENIKIPAWFSFNSKD---GVNVVSGDSLLECAS 140 (247)
Q Consensus 79 ~~~l~~~gvD~i~~ET-~~~--------------~~E~~aa~~~~~~~~~~~pv~is~~~~~---~~~l~~G~~~~~~~~ 140 (247)
++.++++|+|.|-+=. .++ ++.++.+++.+++.+ +.+.++ +.+ .++. +=+-+.+.++
T Consensus 102 i~~a~~~g~~~v~i~~~~s~~~~~~~~~~s~~e~l~~~~~~v~~ak~~G--~~v~~~--~~~~~~~~~~-~~~~~~~~~~ 176 (337)
T 3ble_A 102 VDWIKDSGAKVLNLLTKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKSG--LKINVY--LEDWSNGFRN-SPDYVKSLVE 176 (337)
T ss_dssp HHHHHHHTCCEEEEEEECSHHHHHHHTCCCHHHHHHHHHHHHHHHHHTT--CEEEEE--EETHHHHHHH-CHHHHHHHHH
T ss_pred HHHHHHCCCCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCC--CEEEEE--EEECCCCCcC-CHHHHHHHHH
Confidence 4555668899875433 222 246666777777764 555444 333 2221 2233445666
Q ss_pred HHHhCCCCeEEEEcCC----ChhHHHHHHHHHHhhc-CCCEEEEeC
Q 025860 141 IAESCKRVVSVGINCT----PPRFISGLILIIKKVT-AKPILIYPN 181 (247)
Q Consensus 141 ~~~~~~~~~avG~NC~----~p~~~~~~l~~l~~~~-~~pl~vyPN 181 (247)
.+.+ .+++.|.+.=+ .|..+..+++.+++.. +.||.+...
T Consensus 177 ~~~~-~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~~p~~~i~~H~H 221 (337)
T 3ble_A 177 HLSK-EHIERIFLPDTLGVLSPEETFQGVDSLIQKYPDIHFEFHGH 221 (337)
T ss_dssp HHHT-SCCSEEEEECTTCCCCHHHHHHHHHHHHHHCTTSCEEEECB
T ss_pred HHHH-cCCCEEEEecCCCCcCHHHHHHHHHHHHHhcCCCeEEEEec
Confidence 6666 58888877543 4999999999998886 778877753
No 273
>3sy1_A UPF0001 protein YGGS; engineered protein, structural genomics, PSI-biology, protei structure initiative; HET: MES; 1.47A {Escherichia coli} PDB: 1w8g_A*
Probab=64.45 E-value=23 Score=29.61 Aligned_cols=65 Identities=22% Similarity=0.106 Sum_probs=43.1
Q ss_pred EEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHH---HHHHHHhCCCCeEEEEcCC
Q 025860 91 AFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLE---CASIAESCKRVVSVGINCT 156 (247)
Q Consensus 91 ~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~---~~~~~~~~~~~~avG~NC~ 156 (247)
++.|+.++..++.+-+.+.+.+...+|++.+.... ...+.|.++++ .++.+....++...|+-|.
T Consensus 100 ~i~sVds~~~a~~l~~~a~~~~~~~~V~lqVntG~-e~~R~G~~~ee~~~l~~~i~~~~~l~l~Glmt~ 167 (245)
T 3sy1_A 100 WCITIDRLRIATRLNDQRPAELPPLNVLIQINISD-ENSKSGIQLAELDELAAAVAELPRLRLRGLSAI 167 (245)
T ss_dssp EEEEECCHHHHHHHHHHSCTTSCCEEEEEEBCCSC-TTCCSSBCGGGHHHHHHHHTTCTTEEEEEEECC
T ss_pred EEEecCCHHHHHHHHHHHHHcCCCceEEEEEECCC-CcCCcCCCHHHHHHHHHHHHcCCCCeEEEEEEe
Confidence 35788999988888777776654567777776432 13456755544 4444545567888999774
No 274
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=64.11 E-value=20 Score=30.98 Aligned_cols=56 Identities=21% Similarity=0.254 Sum_probs=39.3
Q ss_pred HhcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEE
Q 025860 82 LVESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGI 153 (247)
Q Consensus 82 l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~ 153 (247)
..++|+|+|.+-.++ ..+.+.+++.++. +.|+.+| .|.+++.+.+.+. .|++.|.+
T Consensus 212 A~~aGaD~I~ld~~~-~~~~k~av~~v~~---~ipi~As----------GGIt~eni~~~a~--tGvD~IsV 267 (286)
T 1x1o_A 212 ALEAGADLILLDNFP-LEALREAVRRVGG---RVPLEAS----------GNMTLERAKAAAE--AGVDYVSV 267 (286)
T ss_dssp HHHHTCSEEEEESCC-HHHHHHHHHHHTT---SSCEEEE----------SSCCHHHHHHHHH--HTCSEEEC
T ss_pred HHHcCCCEEEECCCC-HHHHHHHHHHhCC---CCeEEEE----------cCCCHHHHHHHHH--cCCCEEEE
Confidence 345799999999974 6777777766542 4676653 4778887777554 47888887
No 275
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=64.09 E-value=49 Score=29.99 Aligned_cols=160 Identities=11% Similarity=0.068 Sum_probs=91.1
Q ss_pred HHHHHHHHHHHHHHhcCCCCEEEEecC------------------CCHHHHHHHHHHHHhhCCCCcEEEEEEEcCC----
Q 025860 69 ETLKDFHRRRVQVLVESAPDLIAFETI------------------PNKIEAQAYAELLEEENIKIPAWFSFNSKDG---- 126 (247)
Q Consensus 69 ~e~~~~~~~q~~~l~~~gvD~i~~ET~------------------~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~---- 126 (247)
++..++|.+++ . |+-+|+.|.. ..+.-.+.+.+++++.+ .++++++.=...
T Consensus 61 ~~~~~yy~~rA----~-G~GLiIte~~~V~~~g~~~~~~~gi~~d~~i~~~k~l~~avh~~G--~~i~~QL~H~Gr~~~~ 133 (419)
T 3l5a_A 61 KADLAYAARRS----N-SAGMQVTGAAYIEPYGKLFEYGFNIDHDACIPGLTNMASTMKQHG--SLAIIQLAHAGRFSNQ 133 (419)
T ss_dssp HHHHHHHHHTT----T-SCSEEEEEEEESSGGGCCSTTCEECSSGGGHHHHHHHHHHHHTTS--CEEEEEEECCGGGCHH
T ss_pred HHHHHHHHHHh----c-CCcEEEecceEeCcccccCCCccccccHHHHHHHHHHHHHHHhcC--CEEEEEeccCCCcccc
Confidence 67778888774 2 6778887731 11344566667777653 567777652110
Q ss_pred -----------------------CcccCCC-------cHHHHHHHHHhCCCCeEEEEcCCC---------h---------
Q 025860 127 -----------------------VNVVSGD-------SLLECASIAESCKRVVSVGINCTP---------P--------- 158 (247)
Q Consensus 127 -----------------------~~l~~G~-------~~~~~~~~~~~~~~~~avG~NC~~---------p--------- 158 (247)
.+-.+-+ .+.++++.+.+ .|.|+|=|||.+ |
T Consensus 134 ~~~~~~~~vapS~i~~~~~~~~~pr~mt~~eI~~ii~~F~~AA~rA~~-AGfDgVEIH~ahGYLl~QFlSp~~N~RtD~y 212 (419)
T 3l5a_A 134 AILNFGKVYGPSPMTLHSPIEHVVIAMSHEKINSIIQQYRDATLRAIK-AGFDGVEISIAQRLLIQTFFSTFSNRRTDHY 212 (419)
T ss_dssp HHHHHSEEEESSCEEECSSSSEEEEECCHHHHHHHHHHHHHHHHHHHH-TTCSEEEEECCTTSHHHHHHCTTTCCCCSTT
T ss_pred cccCCCceeCCCCCccccCCCCCCccCCHHHHHHHHHHHHHHHHHHHH-cCCCEEEECCccchHHHHccCCcccccccCC
Confidence 0000111 22234444444 599999999975 3
Q ss_pred ---------hHHHHHHHHHHhhc------CCCEEEEeCCCCcccccccccccCCCCChHHHHHHHHHHHH-cCCeEEeec
Q 025860 159 ---------RFISGLILIIKKVT------AKPILIYPNSGEFYDADRKEWVQNTGVSDEDFVSYVSKWCE-VGASLVGGC 222 (247)
Q Consensus 159 ---------~~~~~~l~~l~~~~------~~pl~vyPNaG~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~G~~iIGGC 222 (247)
..+.++++.+++.. +.||++.-+.....++. .. .+.+++.+.++.+.+ .|+.+|==-
T Consensus 213 GGs~lenR~Rf~~evv~aVr~~v~~~~~~~f~v~vRis~~~~~~~~-~G------~~~ed~~~la~~L~~~~Gvd~I~vs 285 (419)
T 3l5a_A 213 GADSLKNRARLCLEVMRAVQEVIDKEAPDNFILGFRATPEETRGSD-LG------YTIDEFNQLIDWVMDVSNIQYLAIA 285 (419)
T ss_dssp STTCHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEEECSCEEETTE-EE------ECHHHHHHHHHHHHHHSCCCCEEEC
T ss_pred CCchhhhhhHHHHHHHHHHHHHHhhhcCCCeeEEEecccccccCCC-CC------CCHHHHHHHHHHHHhhcCCcEEEEe
Confidence 13455566666554 56899988775422210 01 246778888888888 887765322
Q ss_pred CCC-----------C----hHHHHHHHHHhhCCCCC
Q 025860 223 CRT-----------T----PNTIKGIYRTLSNRSSV 243 (247)
Q Consensus 223 CGt-----------~----P~hI~al~~~l~~~~~~ 243 (247)
.|+ + .+.++.+++.+.+..|+
T Consensus 286 ~g~~~~~~~~~~~~g~~~~~~~a~~Ik~~v~~~iPV 321 (419)
T 3l5a_A 286 SWGRHIYQNTSRTPGDHFGRPVNQIVYEHLAGRIPL 321 (419)
T ss_dssp CTTCCGGGCBCCCSSTTTTSBHHHHHHHHHTTSSCE
T ss_pred eCCccccccccCCCCccccHHHHHHHHHHcCCCCeE
Confidence 221 1 13577777777544444
No 276
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=63.98 E-value=47 Score=29.51 Aligned_cols=92 Identities=11% Similarity=-0.001 Sum_probs=56.8
Q ss_pred HHHHHHhCCCCeEEEEcCCC---------h-----------------hHHHHHHHHHHhhcC-CCEEEEeCCCCcccccc
Q 025860 138 CASIAESCKRVVSVGINCTP---------P-----------------RFISGLILIIKKVTA-KPILIYPNSGEFYDADR 190 (247)
Q Consensus 138 ~~~~~~~~~~~~avG~NC~~---------p-----------------~~~~~~l~~l~~~~~-~pl~vyPNaG~~~d~~~ 190 (247)
+++.+.+ .|.|+|=|||.+ | ..+.++++.+++... .||++.-+....+++..
T Consensus 158 AA~~a~~-aGfDgVEih~a~GYLl~QFLSp~~N~RtD~yGGslenR~rf~~eiv~aVr~~vg~~~v~vRls~~~~~~g~~ 236 (362)
T 4ab4_A 158 GAENAKA-AGFDGVEIHGANGYLLDQFLQSSTNQRTDRYGGSLENRARLLLEVTDAAIEVWGAQRVGVHLAPRADAHDMG 236 (362)
T ss_dssp HHHHHHH-TTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCSSSCC
T ss_pred HHHHHHH-cCCCEEEECCcCccHHHhhcCCccccccCCCCCchhhHHHHHHHHHHHHHHhcCCCceEEEeeccccccccC
Confidence 3444444 589999999975 3 234566667776653 29999888754222110
Q ss_pred cccccCCCCChHHHHHHHHHHHHcCCeEE---eecCCCChHHHHHHHHHhh
Q 025860 191 KEWVQNTGVSDEDFVSYVSKWCEVGASLV---GGCCRTTPNTIKGIYRTLS 238 (247)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~G~~iI---GGCCGt~P~hI~al~~~l~ 238 (247)
. ..+.+++.+.++.+.+.|+.+| +|. .+++.++.+++.++
T Consensus 237 ----~--~~~~~~~~~la~~l~~~Gvd~i~v~~~~--~~~~~~~~ik~~~~ 279 (362)
T 4ab4_A 237 ----D--ADRAETFTYVARELGKRGIAFICSRERE--ADDSIGPLIKEAFG 279 (362)
T ss_dssp ----C--TTHHHHHHHHHHHHHHTTCSEEEEECCC--CTTCCHHHHHHHHC
T ss_pred ----C--CCcHHHHHHHHHHHHHhCCCEEEECCCC--CCHHHHHHHHHHCC
Confidence 0 0123457788888888887765 333 34566777777764
No 277
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=63.96 E-value=73 Score=27.64 Aligned_cols=94 Identities=12% Similarity=0.068 Sum_probs=54.1
Q ss_pred HHHHHHhcCC--CCEEEEec-CCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEE
Q 025860 77 RRVQVLVESA--PDLIAFET-IPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGI 153 (247)
Q Consensus 77 ~q~~~l~~~g--vD~i~~ET-~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~ 153 (247)
++++.+.+.| +|++.+.+ ..+.......++.+++.....|++.. ...+++++.. +.+ .|+++|-+
T Consensus 109 ~~a~~~~~~g~~~~~i~i~~~~G~~~~~~~~i~~lr~~~~~~~vi~G----------~v~s~e~A~~-a~~-aGad~Ivv 176 (336)
T 1ypf_A 109 EFVQQLAAEHLTPEYITIDIAHGHSNAVINMIQHIKKHLPESFVIAG----------NVGTPEAVRE-LEN-AGADATKV 176 (336)
T ss_dssp HHHHHHHHTTCCCSEEEEECSSCCSHHHHHHHHHHHHHCTTSEEEEE----------EECSHHHHHH-HHH-HTCSEEEE
T ss_pred HHHHHHHhcCCCCCEEEEECCCCCcHHHHHHHHHHHHhCCCCEEEEC----------CcCCHHHHHH-HHH-cCCCEEEE
Confidence 3577788888 99987754 22444555667777776423444421 1234555554 444 47888777
Q ss_pred -cCCC------hh-------HHHHHHHHHHhhcCCCEEEEeCCCC
Q 025860 154 -NCTP------PR-------FISGLILIIKKVTAKPILIYPNSGE 184 (247)
Q Consensus 154 -NC~~------p~-------~~~~~l~~l~~~~~~pl~vyPNaG~ 184 (247)
|..+ +. ....+|.++.+..+.|+ .+++|.
T Consensus 177 s~hgG~~~~~~~~~~~g~~g~~~~~l~~v~~~~~ipV--Ia~GGI 219 (336)
T 1ypf_A 177 GIGPGKVCITKIKTGFGTGGWQLAALRWCAKAASKPI--IADGGI 219 (336)
T ss_dssp CSSCSTTCHHHHHHSCSSTTCHHHHHHHHHHTCSSCE--EEESCC
T ss_pred ecCCCceeecccccCcCCchhHHHHHHHHHHHcCCcE--EEeCCC
Confidence 2221 11 03567777777777884 566653
No 278
>3n3m_A Orotidine 5'-phosphate decarboxylase; P. falciparum, 5'-monophosphate decarboxylase, 6- UMP, lyase; HET: PGE NUP; 1.47A {Plasmodium falciparum} SCOP: c.1.2.3 PDB: 2qaf_A* 3bar_A* 2q8z_A* 3mwa_A* 3n2m_A* 3bpw_A* 3n34_A* 3s9y_A* 2f84_A 2q8l_A 2za1_A* 2za2_A 2za3_A* 2zcg_A 3vi2_A*
Probab=63.84 E-value=5.1 Score=35.70 Aligned_cols=147 Identities=8% Similarity=-0.010 Sum_probs=79.7
Q ss_pred HHHHHHhcCCCCEE-----EEecCCC--HHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCe
Q 025860 77 RRVQVLVESAPDLI-----AFETIPN--KIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVV 149 (247)
Q Consensus 77 ~q~~~l~~~gvD~i-----~~ET~~~--~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~ 149 (247)
..++.+.+ -|+++ +||.... +..++.+++.+++. +.+|+.-+-+.|-+ .+...+++.+-...++|
T Consensus 108 ~lvd~l~~-~v~~vKvG~~lf~~~G~~gv~~l~~l~~~l~~~--g~~VflDlK~~DIp-----nTv~~ya~~~~~~lgaD 179 (342)
T 3n3m_A 108 YIINETNK-YALTFKMNFAFYIPYGSVGIDVLKNVFDYLYEL--NIPTILDMKINDIG-----NTVKNYRKFIFEYLKSD 179 (342)
T ss_dssp HHHHHHGG-GCSEEEEEGGGTSTTTHHHHHHHHHHHHHHHHH--TCCEEEEEEECCCH-----HHHHHHHHHHHTTSCCS
T ss_pred HHHHHhcC-cCcEEEecHHHHHhcCHHHHHHHHHHHHHHHhC--CCeEEEEeecCCcH-----HHHHHHHHHHHHhcCCC
Confidence 55565543 35665 3444331 23445555666665 58999999887644 34555565542235899
Q ss_pred EEEEcCC-ChhHHHHHH-HHHHhhcCCC--EEEEeCCCCcccccccccccCC--CCCh--HHHHHHHHHHHH-----cCC
Q 025860 150 SVGINCT-PPRFISGLI-LIIKKVTAKP--ILIYPNSGEFYDADRKEWVQNT--GVSD--EDFVSYVSKWCE-----VGA 216 (247)
Q Consensus 150 avG~NC~-~p~~~~~~l-~~l~~~~~~p--l~vyPNaG~~~d~~~~~~~~~~--~~~~--~~~~~~~~~~~~-----~G~ 216 (247)
++-++.. +++.|.+++ +...+....- |.+.-|.|. ..++... ..++ +...+.+.+|.+ .+.
T Consensus 180 ~vTVh~~~G~~~l~~a~~~~~~~~~~~v~vvt~tSs~~~------~dlq~~~~~~~~~ly~~V~~~a~~~a~~~~~a~~~ 253 (342)
T 3n3m_A 180 SCTVNIYMGTNMLKDICYDEEKNKYYSAFVLVKTTNPDS------AIFQKNLSLDNKQAYVIMAQEALNMSSYLNLEQNN 253 (342)
T ss_dssp EEEECCTTCSGGGGGTSEETTTTEECEEEEEEECCSTTT------HHHHTTCEETTEEHHHHHHHHHHHHHHHTTTGGGT
T ss_pred EEEEcccCCHHHHHHHHHHHHhhcCCcEEEEEeCCCCCH------HHHHHHhccCCChHHHHHHHHHHHHHHhccccccc
Confidence 9999997 666665543 2222111111 223444432 1111100 0111 335667777751 234
Q ss_pred eEEeecCCC-ChHHHHHHHHHh
Q 025860 217 SLVGGCCRT-TPNTIKGIYRTL 237 (247)
Q Consensus 217 ~iIGGCCGt-~P~hI~al~~~l 237 (247)
...|=-||. .|++++.|++.+
T Consensus 254 G~~GvV~GATsp~e~~~iR~~~ 275 (342)
T 3n3m_A 254 EFIGFVVGANSYDEMNYIRTYF 275 (342)
T ss_dssp CCEEEEECTTCHHHHHHHHHHS
T ss_pred CCceEEECCCCHHHHHHHHHhC
Confidence 457777765 599999999876
No 279
>1ypx_A Putative vitamin-B12 independent methionine synth protein; alpha-beta protein; 2.60A {Listeria monocytogenes}
Probab=63.81 E-value=40 Score=29.95 Aligned_cols=144 Identities=8% Similarity=0.072 Sum_probs=76.8
Q ss_pred HHHHHHHHHHHHHHHhcCCCCEEEE-ecC----C-------------CH-HHHHHHHHHHHhhCC----CCcEEEEEEEc
Q 025860 68 VETLKDFHRRRVQVLVESAPDLIAF-ETI----P-------------NK-IEAQAYAELLEEENI----KIPAWFSFNSK 124 (247)
Q Consensus 68 ~~e~~~~~~~q~~~l~~~gvD~i~~-ET~----~-------------~~-~E~~aa~~~~~~~~~----~~pv~is~~~~ 124 (247)
.+++.+.+++-++.|.++|+++|-| |+. . +. .-+..++++++..-. +.++.+-+ |.
T Consensus 162 ~~~la~a~~~ei~~l~~aG~~~IQiDeP~l~~~l~~~~~~~~~~~~~~~~~~~~~~v~~~n~~~~~~~~~~~i~~Hi-C~ 240 (375)
T 1ypx_A 162 ANDLATAYQKAIQAFYDAGCRYLQLDDTSWSYLCSDEQREVVRQRGFDPETLQETYKNLINEAIKHKPADMVITMHI-CR 240 (375)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEEEEECHHHHTTSCC--------CCSTTTHHHHHHHHHHHHTTTCCTTCEEEEEE-CC
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEEecCCchhhhhccchhcccccccCCHHHHHHHHHHHHHHHHhcCCCCCeEEEEE-ec
Confidence 3667889999999999999998854 321 1 11 113455666665322 24555444 32
Q ss_pred CC---CcccCCCcHHHHHHHHH-hCCCCeEEEEcCCChhH-HHHHHHHHHhh-cCCCEEEEeCCCCcccccccccccCCC
Q 025860 125 DG---VNVVSGDSLLECASIAE-SCKRVVSVGINCTPPRF-ISGLILIIKKV-TAKPILIYPNSGEFYDADRKEWVQNTG 198 (247)
Q Consensus 125 ~~---~~l~~G~~~~~~~~~~~-~~~~~~avG~NC~~p~~-~~~~l~~l~~~-~~~pl~vyPNaG~~~d~~~~~~~~~~~ 198 (247)
.+ ....+| .+..++..+. + .+++++.+-+..... -...|+.+... ..+-+++++-. ..+.
T Consensus 241 gn~~s~~~~~g-~~~~i~~~l~~~-~~~d~i~lE~~~~r~g~~e~L~~~~~~~~~v~lGvvd~~--------~~~~---- 306 (375)
T 1ypx_A 241 GNFRSTWIAEG-GYGPVAETLFGK-LNIDGFFLEYDNERSGDFAPLKYVTRPDLKIVLGLITSK--------TGEL---- 306 (375)
T ss_dssp C-----------CCSGGGHHHHTT-CCCSEEEEECCSCC---CCTTCCCCCTTCEEEEEEECSS--------SCC-----
T ss_pred cccCCcccccc-chHHHHHHHHhh-CCCCEEEEEecCCCCCcHHHHHHhhhcCCeEEEeeecCc--------CCCC----
Confidence 22 223233 2345566665 5 689999999863221 11222222110 01112333321 1112
Q ss_pred CChHHHHHHHHHHHHc-CCe--EEeecCCCC
Q 025860 199 VSDEDFVSYVSKWCEV-GAS--LVGGCCRTT 226 (247)
Q Consensus 199 ~~~~~~~~~~~~~~~~-G~~--iIGGCCGt~ 226 (247)
.++++..+.+++..+. |.. +|.=-||-.
T Consensus 307 e~~e~v~~ri~~a~~~v~~e~l~lsPdCGl~ 337 (375)
T 1ypx_A 307 EDEAAIKARIEEASEIVPLSQLRLSPQCGFA 337 (375)
T ss_dssp CCSHHHHHHHHHHHHHSCGGGEEEEESSCCC
T ss_pred CCHHHHHHHHHHHHHhcCccceEecCCCCcc
Confidence 3688888888877765 776 889999866
No 280
>2o0t_A Diaminopimelate decarboxylase; PLP binding enzyme, lysine biosynthesis, STRU genomics, TB structural genomics consortium, TBSGC; HET: LLP; 2.33A {Mycobacterium tuberculosis} PDB: 1hkv_A* 1hkw_A
Probab=63.78 E-value=45 Score=30.35 Aligned_cols=70 Identities=11% Similarity=0.091 Sum_probs=43.7
Q ss_pred cCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEc-----------CCCcccCCCc-----HHHHHHHHHhCCC
Q 025860 84 ESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAWFSFNSK-----------DGVNVVSGDS-----LLECASIAESCKR 147 (247)
Q Consensus 84 ~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~-----------~~~~l~~G~~-----~~~~~~~~~~~~~ 147 (247)
+.|++.+ ++-++.|++.+.+.+++.+...+|++-+... .....+.|.+ +.++++.+.+..+
T Consensus 130 ~~gv~~i---~vds~~el~~l~~~a~~~~~~~~v~lrvn~g~~~~~~~~~~~~~~~srfG~~~~~~e~~~~~~~~~~~~~ 206 (467)
T 2o0t_A 130 KAGVGHI---VVDSMTEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHEDQKFGLSVASGAAMAAVRRVFATDH 206 (467)
T ss_dssp HHTCSEE---EECSHHHHHHHHHHHHHHTCCEEEEEEEECSEEEEETEEEEESSCCSSSSEETTTTHHHHHHHHHHHCSS
T ss_pred HCCCCEE---EECCHHHHHHHHHHHHhhCCCCeEEEEEcCCCCCCCCcccccCCCCCCcCCcCCHHHHHHHHHHHHhCCC
Confidence 3578755 5667888888777777665456777777643 0112345654 4455565655457
Q ss_pred CeEEEEcCC
Q 025860 148 VVSVGINCT 156 (247)
Q Consensus 148 ~~avG~NC~ 156 (247)
+...|+-|-
T Consensus 207 l~l~Gl~~H 215 (467)
T 2o0t_A 207 LRLVGLHSH 215 (467)
T ss_dssp EEEEEEECC
T ss_pred CCEEEEEEE
Confidence 788888884
No 281
>4f2d_A L-arabinose isomerase; structural genomics, PSI-1, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; HET: MSE RB0; 2.30A {Escherichia coli} PDB: 2ajt_A 2hxg_A
Probab=63.74 E-value=35 Score=31.78 Aligned_cols=51 Identities=20% Similarity=0.130 Sum_probs=26.8
Q ss_pred cHHHHHHHHHhCCCCeE-EEEcCC-ChhHH-HHHHHHHHhhcCCCEEE---EeCCCCcccc
Q 025860 134 SLLECASIAESCKRVVS-VGINCT-PPRFI-SGLILIIKKVTAKPILI---YPNSGEFYDA 188 (247)
Q Consensus 134 ~~~~~~~~~~~~~~~~a-vG~NC~-~p~~~-~~~l~~l~~~~~~pl~v---yPNaG~~~d~ 188 (247)
.+.++++.++....+++ |-..|+ +|+.+ .++++. .++|+++ +||...+|+.
T Consensus 59 ~~~~~~~~~n~~~~vdgvi~~~~TFs~a~~~i~~l~~----l~~PvL~~~~q~~~~ip~~~ 115 (500)
T 4f2d_A 59 EITAICRDANYDDRCAGLVVWLHTFSPAKMWINGLTM----LNKPLLQFHTQFNAALPWDS 115 (500)
T ss_dssp HHHHHHHHHHHCTTEEEEEEECCSCCCTHHHHHHHHH----CCSCEEEEECCSCSSCCTTT
T ss_pred HHHHHHHHhccccCCcEEEEeCCcCccHHHHHHHHHh----cCCCEEEEeCCCCCCCCccc
Confidence 34444444421234554 445555 56543 444443 4688776 7777666654
No 282
>2jfz_A Glutamate racemase; cell WALL, isomerase, cell shape, peptidoglycan synthesis, peptidoglycan biosynthesis; HET: 003 DGL; 1.86A {Helicobacter pylori} PDB: 2jfx_A* 2jfy_A* 2w4i_A*
Probab=63.74 E-value=12 Score=31.28 Aligned_cols=53 Identities=19% Similarity=0.244 Sum_probs=37.7
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEE
Q 025860 61 NYGDAITVETLKDFHRRRVQVLVESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAW 118 (247)
Q Consensus 61 ~y~~~~s~~e~~~~~~~q~~~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~ 118 (247)
+|++ -+.+++.++..+.++.|.+.|+|+|++=+.+.- ..+++.+++.. ++||+
T Consensus 38 Pyg~-~s~~~i~~~~~~~~~~L~~~g~d~iviaCNTa~---~~~~~~lr~~~-~iPvi 90 (255)
T 2jfz_A 38 PYGT-KDPTTIKQFGLEALDFFKPHEIELLIVACNTAS---ALALEEMQKYS-KIPIV 90 (255)
T ss_dssp CCTT-SCHHHHHHHHHHHHHHHGGGCCSCEEECCHHHH---HHTHHHHHHHC-SSCEE
T ss_pred CCCC-CCHHHHHHHHHHHHHHHHHCCCCEEEEeCchhh---HHHHHHHHHhC-CCCEE
Confidence 4543 578999999999999999999999997654421 11455566553 57876
No 283
>3out_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, MURI, cell envelope; HET: MSE DGL; 1.65A {Francisella tularensis subsp}
Probab=63.72 E-value=15 Score=31.20 Aligned_cols=33 Identities=18% Similarity=0.385 Sum_probs=28.1
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhcCCCCEEEEec
Q 025860 61 NYGDAITVETLKDFHRRRVQVLVESAPDLIAFET 94 (247)
Q Consensus 61 ~y~~~~s~~e~~~~~~~q~~~l~~~gvD~i~~ET 94 (247)
+|+. -+.+++.++-.+.++.|.+.|+|+|++=+
T Consensus 45 PYG~-~~~~~i~~~~~~~~~~L~~~g~~~iVIAC 77 (268)
T 3out_A 45 PYGT-KSRATIQKFAAQTAKFLIDQEVKAIIIAC 77 (268)
T ss_dssp CCTT-SCHHHHHHHHHHHHHHHHHTTCSEEEECC
T ss_pred CCCC-CCHHHHHHHHHHHHHHHHHCCCCEEEEeC
Confidence 4554 58899999999999999999999999854
No 284
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=63.51 E-value=24 Score=30.81 Aligned_cols=73 Identities=12% Similarity=-0.048 Sum_probs=38.4
Q ss_pred HHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEEcCC----ChhHHHHHHHHHHhhcC----
Q 025860 102 QAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGINCT----PPRFISGLILIIKKVTA---- 173 (247)
Q Consensus 102 ~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~NC~----~p~~~~~~l~~l~~~~~---- 173 (247)
+.+++.+++.+ .. +.|.+.+.++. +=+-+.+.++.+.+ .|++.|.+.=+ .|..+..+++.+++...
T Consensus 125 ~~~v~~a~~~g--~~--v~f~~~d~~~~-~~~~~~~~~~~~~~-~G~~~i~l~DT~G~~~P~~v~~lv~~l~~~~~~~~~ 198 (325)
T 3eeg_A 125 VAAVKQAKKVV--HE--VEFFCEDAGRA-DQAFLARMVEAVIE-AGADVVNIPDTTGYMLPWQYGERIKYLMDNVSNIDK 198 (325)
T ss_dssp HHHHHHHHTTS--SE--EEEEEETGGGS-CHHHHHHHHHHHHH-HTCSEEECCBSSSCCCHHHHHHHHHHHHHHCSCGGG
T ss_pred HHHHHHHHHCC--CE--EEEEccccccc-hHHHHHHHHHHHHh-cCCCEEEecCccCCcCHHHHHHHHHHHHHhCCCCCc
Confidence 34555555543 23 34555554432 22233344454444 36676665443 37777777777776644
Q ss_pred CCEEEEe
Q 025860 174 KPILIYP 180 (247)
Q Consensus 174 ~pl~vyP 180 (247)
.||.+..
T Consensus 199 ~~i~~H~ 205 (325)
T 3eeg_A 199 AILSAHC 205 (325)
T ss_dssp SEEEECB
T ss_pred eEEEEEe
Confidence 5555544
No 285
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=63.43 E-value=22 Score=29.23 Aligned_cols=87 Identities=13% Similarity=0.153 Sum_probs=51.7
Q ss_pred CCCCEEEEecCCCHH----HHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHH---HHHHh-CCCCeEEEEcCC
Q 025860 85 SAPDLIAFETIPNKI----EAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECA---SIAES-CKRVVSVGINCT 156 (247)
Q Consensus 85 ~gvD~i~~ET~~~~~----E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~---~~~~~-~~~~~avG~NC~ 156 (247)
.+.|++++|+-+.+. +.....+.++.. +.|+++-..... .++..+. +.+.. ...+.++-+|..
T Consensus 109 ~~~D~vlIEgaggl~~p~~~~~~~adla~~l--~~pviLV~~~~~-------~~i~~~~~~~~~l~~~~~~i~GvIlN~~ 179 (228)
T 3of5_A 109 QDLDILFIEGAGGLLTPYSDHTTQLDLIKAL--QIPVLLVSAIKV-------GCINHTLLTINELNRHNIKLAGWIANCN 179 (228)
T ss_dssp SSCSEEEEEEEEETTCBSSSSCBHHHHHHHH--TCCEEEEEECST-------THHHHHHHHHHHHHHTTCCEEEEEEEEC
T ss_pred ccCCEEEEECCCccccccccchhHHHHHHHc--CCCEEEEEcCCc-------chHHHHHHHHHHHHhCCCcEEEEEEECc
Confidence 578999999964322 222345666766 579887665432 1233333 33332 234557778997
Q ss_pred Chh--HHHHHHHHHHhhcCCC-EEEEe
Q 025860 157 PPR--FISGLILIIKKVTAKP-ILIYP 180 (247)
Q Consensus 157 ~p~--~~~~~l~~l~~~~~~p-l~vyP 180 (247)
.++ .....++.+++..+.| +++-|
T Consensus 180 ~~~~~~~~~~~~~l~~~~g~pvLG~iP 206 (228)
T 3of5_A 180 DSNIKYIDEQINTIEELSGYKCSAKIS 206 (228)
T ss_dssp CTTCSCHHHHHHHHHHHHSCCCSEEEE
T ss_pred CCcchhhHHHHHHHHHhhCCCEEEECC
Confidence 543 3455667777767778 57778
No 286
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=63.24 E-value=68 Score=27.03 Aligned_cols=117 Identities=10% Similarity=0.046 Sum_probs=63.8
Q ss_pred HHHHHhcCCCCEEEEec----CCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEE-
Q 025860 78 RVQVLVESAPDLIAFET----IPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVG- 152 (247)
Q Consensus 78 q~~~l~~~gvD~i~~ET----~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG- 152 (247)
+++.+++.|+|+|=+-. ++..+|++-++..+++. ..+.+|+... ..+.+-..+....|++.|-
T Consensus 30 ~a~~~v~~GAdiIDIg~g~~~v~~~ee~~rvv~~i~~~---~~~pisIDT~---------~~~v~~aAl~a~~Ga~iINd 97 (262)
T 1f6y_A 30 WARRQEEGGARALDLNVGPAVQDKVSAMEWLVEVTQEV---SNLTLCLDST---------NIKAIEAGLKKCKNRAMINS 97 (262)
T ss_dssp HHHHHHHHTCSEEEEBCC----CHHHHHHHHHHHHHTT---CCSEEEEECS---------CHHHHHHHHHHCSSCEEEEE
T ss_pred HHHHHHHCCCcEEEECCCCCCCChHHHHHHHHHHHHHh---CCCeEEEeCC---------CHHHHHHHHhhCCCCCEEEE
Confidence 56666779999996653 56777888888888864 2344566422 2222222222222555442
Q ss_pred EcCCChhHHHHHHHHHHhhcCCCEEEEeC--CCCcccccccccccCCCCChHHHHHHHHHHHHcCCe
Q 025860 153 INCTPPRFISGLILIIKKVTAKPILIYPN--SGEFYDADRKEWVQNTGVSDEDFVSYVSKWCEVGAS 217 (247)
Q Consensus 153 ~NC~~p~~~~~~l~~l~~~~~~pl~vyPN--aG~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 217 (247)
+|-. .+.+..+++..++ .+.|+++.++ .|.+. ++.. .++.+.+.+....+.|+.
T Consensus 98 vs~~-~d~~~~~~~~~a~-~~~~vvlmh~~~~G~p~-----t~~~----~~~~~~~~~~~a~~~Gi~ 153 (262)
T 1f6y_A 98 TNAE-REKVEKLFPLAVE-HGAALIGLTMNKTGIPK-----DSDT----RLAFAMELVAAADEFGLP 153 (262)
T ss_dssp ECSC-HHHHHHHHHHHHH-TTCEEEEESCCSSCSCS-----SHHH----HHHHHHHHHHHHHHHTCC
T ss_pred CCCC-cccHHHHHHHHHH-hCCcEEEEcCCCCCCCC-----CHHH----HHHHHHHHHHHHHHCCCC
Confidence 4443 3333344444433 4789999997 44321 1111 134455566667778884
No 287
>1ur1_A Endoxylanase; hydrolase, family 10, glycoside hydrolase, hemicellulose, xylan degradation; HET: XYS AHR; 1.43A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uqy_A* 1uqz_A* 1ur2_A* 2cnc_A*
Probab=63.00 E-value=16 Score=32.76 Aligned_cols=50 Identities=8% Similarity=0.112 Sum_probs=39.0
Q ss_pred HHHHHHHHHHhcCC--CCEEEEe-----cCCCHHHHHHHHHHHHhhCCCCcEEEE-EEEc
Q 025860 73 DFHRRRVQVLVESA--PDLIAFE-----TIPNKIEAQAYAELLEEENIKIPAWFS-FNSK 124 (247)
Q Consensus 73 ~~~~~q~~~l~~~g--vD~i~~E-----T~~~~~E~~aa~~~~~~~~~~~pv~is-~~~~ 124 (247)
+.+..+++.|.+.| +|.|-+. ..++..+++.+++.+... ++||+|| +.+.
T Consensus 209 ~~~~~~v~~l~~~g~~iDgiG~Q~H~~~~~p~~~~i~~~l~~~a~~--Gl~i~iTElDi~ 266 (378)
T 1ur1_A 209 EATVEMIERLQKRGMPIHGLGIQGHLGIDTPPIAEIEKSIIAFAKL--GLRVHFTSLDVD 266 (378)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEECCEEESSCSCHHHHHHHHHHHHTT--TCEEEEEEEEEE
T ss_pred HHHHHHHHHHHHCCCCcceEEecCcCCCCCCCHHHHHHHHHHHHhc--CCeEEEEecccC
Confidence 44556888888888 5999886 457889999999988876 5899998 5554
No 288
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=62.91 E-value=64 Score=26.67 Aligned_cols=126 Identities=10% Similarity=0.021 Sum_probs=66.0
Q ss_pred HHHHHhcCCCCEE-----EEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHH---HhCCCCe
Q 025860 78 RVQVLVESAPDLI-----AFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIA---ESCKRVV 149 (247)
Q Consensus 78 q~~~l~~~gvD~i-----~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~---~~~~~~~ 149 (247)
+++.+.+.|+|++ +++.. +..++...+..+++...++|+++++-...+|=-.++. -++-++.+ ....+++
T Consensus 22 ~~~~~~~~~~D~vElRvD~l~~~-~~~~v~~~~~~lr~~~~~~PiI~T~R~~~eGG~~~~~-~~~~~~ll~~~~~~~~~d 99 (238)
T 1sfl_A 22 QKINHRIDAIDVLELRIDQFENV-TVDQVAEMITKLKVMQDSFKLLVTYRTKLQGGYGQFT-NDSYLNLISDLANINGID 99 (238)
T ss_dssp HHHHHTTTTCSEEEEECTTSTTC-CHHHHHHHHHHHC---CCSEEEEECCBGGGTSCBCCC-HHHHHHHHHHGGGCTTCC
T ss_pred HHHHhhhcCCCEEEEEecccccC-CHHHHHHHHHHHHHhccCCCEEEEeeccccCCCCCCC-HHHHHHHHHHHHHhCCCC
Confidence 5555666788887 33444 5677777777777753368999888755433212332 23333333 3323578
Q ss_pred EEEEcCCC--h-hHHHHHHHHHHhhcCCCEEE-EeCCCCcccccccccccCCCCChHHHHHHHHHHHHcCCeEE
Q 025860 150 SVGINCTP--P-RFISGLILIIKKVTAKPILI-YPNSGEFYDADRKEWVQNTGVSDEDFVSYVSKWCEVGASLV 219 (247)
Q Consensus 150 avG~NC~~--p-~~~~~~l~~l~~~~~~pl~v-yPNaG~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~iI 219 (247)
.|=|--.. + +.+..+++..++. +..+++ |=|-. . ..+.+++.+...+..+.|+.|+
T Consensus 100 ~iDvEl~~~~~~~~~~~l~~~~~~~-~~kvI~S~Hdf~-----------~--tp~~~el~~~~~~~~~~gaDiv 159 (238)
T 1sfl_A 100 MIDIEWQADIDIEKHQRIITHLQQY-NKEVIISHHNFE-----------S--TPPLDELQFIFFKMQKFNPEYV 159 (238)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHHT-TCEEEEEEEESS-----------C--CCCHHHHHHHHHHHHTTCCSEE
T ss_pred EEEEEccCCCChHHHHHHHHHHHhc-CCEEEEEecCCC-----------C--CcCHHHHHHHHHHHHHcCCCEE
Confidence 87777653 4 4455555554433 233322 22211 0 0123556666666666776554
No 289
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=62.84 E-value=81 Score=27.79 Aligned_cols=145 Identities=10% Similarity=0.093 Sum_probs=82.1
Q ss_pred HHHHHHHHHHHHHHHhcCCCCEEEEecC----------C------C------HHH---HHHHHHHHHhh-CCCCcEEEEE
Q 025860 68 VETLKDFHRRRVQVLVESAPDLIAFETI----------P------N------KIE---AQAYAELLEEE-NIKIPAWFSF 121 (247)
Q Consensus 68 ~~e~~~~~~~q~~~l~~~gvD~i~~ET~----------~------~------~~E---~~aa~~~~~~~-~~~~pv~is~ 121 (247)
.+++.+.|.+.++.+.++|.|.|=+--- | + ... +..+++++++. +.+ ||.+-+
T Consensus 156 I~~~i~~f~~aA~~a~~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~-~v~vrl 234 (364)
T 1vyr_A 156 IPGIVNDFRQAVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWSAD-RIGIRV 234 (364)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHSCGG-GEEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHHHhcCCC-cEEEEE
Confidence 3556667887888888899999955221 1 1 112 34456666664 324 888877
Q ss_pred EEcCCCc-c-cCCCcHHHH---HHHHHhCCCCeEEEEcCCC----hhHHHHHHHHHHhhcCCCEEEEeCCCCcccccccc
Q 025860 122 NSKDGVN-V-VSGDSLLEC---ASIAESCKRVVSVGINCTP----PRFISGLILIIKKVTAKPILIYPNSGEFYDADRKE 192 (247)
Q Consensus 122 ~~~~~~~-l-~~G~~~~~~---~~~~~~~~~~~avG~NC~~----p~~~~~~l~~l~~~~~~pl~vyPNaG~~~d~~~~~ 192 (247)
+..+... . .++.+++++ ++.+.+ .+++.|-+-... |..-...++.+++..+.|+++ |.|.
T Consensus 235 s~~~~~~~~~~~~~~~~~~~~~a~~l~~-~G~d~i~v~~~~~~~~~~~~~~~~~~v~~~~~iPvi~--~Ggi-------- 303 (364)
T 1vyr_A 235 SPIGTFQNVDNGPNEEADALYLIEELAK-RGIAYLHMSETDLAGGKPYSEAFRQKVRERFHGVIIG--AGAY-------- 303 (364)
T ss_dssp CCSSCBTTBCCCTTHHHHHHHHHHHHHH-TTCSEEEEECCBTTBCCCCCHHHHHHHHHHCCSEEEE--ESSC--------
T ss_pred ccccccccccCCCCCHHHHHHHHHHHHH-hCCCEEEEecCcccCCCcccHHHHHHHHHHCCCCEEE--ECCc--------
Confidence 6543211 0 235566654 555555 588988886631 111135677788888888653 3331
Q ss_pred cccCCCCChHHHHHHHHHHHHcC-CeEEeecCC--CChHHHHHHHH
Q 025860 193 WVQNTGVSDEDFVSYVSKWCEVG-ASLVGGCCR--TTPNTIKGIYR 235 (247)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~G-~~iIGGCCG--t~P~hI~al~~ 235 (247)
+++ .+.+.++.| +.+|+=+=+ ..|+-.+.+++
T Consensus 304 -------t~~----~a~~~l~~g~aD~V~~gR~~l~~P~~~~~~~~ 338 (364)
T 1vyr_A 304 -------TAE----KAEDLIGKGLIDAVAFGRDYIANPDLVARLQK 338 (364)
T ss_dssp -------CHH----HHHHHHHTTSCSEEEESHHHHHCTTHHHHHHH
T ss_pred -------CHH----HHHHHHHCCCccEEEECHHHHhChhHHHHHHc
Confidence 233 334456666 777764332 25666666553
No 290
>3qw3_A Orotidine-5-phosphate decarboxylase/orotate phosphoribosyltransferase, putative (OMPDCASE-OPRTASE,...; orotidine monophosphate decarboxylase; 1.70A {Leishmania infantum}
Probab=62.81 E-value=66 Score=27.05 Aligned_cols=146 Identities=14% Similarity=0.087 Sum_probs=80.1
Q ss_pred HHHHHHHHHHHhcCCCCEE-----EEecCCC--HHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHh
Q 025860 72 KDFHRRRVQVLVESAPDLI-----AFETIPN--KIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAES 144 (247)
Q Consensus 72 ~~~~~~q~~~l~~~gvD~i-----~~ET~~~--~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~ 144 (247)
.++-+..++.+.+ -|+++ +||.... +..++.+++.++ .+.+|+.-+-+.|-+ .+...+++.+..
T Consensus 31 ~~~~~~lv~~l~~-~v~~~Kvg~~lf~~~G~~g~~~l~~l~~~~~---~g~~VflDlK~~DI~-----nTv~~~a~~~~~ 101 (255)
T 3qw3_A 31 VEECKRLIEQTHE-YAAAYKPNAAFFEFFGAEGWAALSEVIRAVP---AGIPVVLDAKRGDIA-----DTADAYATSAFK 101 (255)
T ss_dssp HHHHHHHHHHHGG-GCSEEEEBHHHHHTTTHHHHHHHHHHHHHSC---TTCCBEEEEEECCCH-----HHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCC-cCcEEEEcHHHHHhcCHHHHHHHHHHHHHhc---CCCeEEEEeecCCcH-----HHHHHHHHHHHH
Confidence 4445556665553 35554 4454431 122222333322 268999998886643 345566666642
Q ss_pred CCCCeEEEEcCC-ChhHHHHHHHHHHhhcCCCEEE---EeCCCC--cccccccccccCCCCC-hHHHHHHHHH-HHHcCC
Q 025860 145 CKRVVSVGINCT-PPRFISGLILIIKKVTAKPILI---YPNSGE--FYDADRKEWVQNTGVS-DEDFVSYVSK-WCEVGA 216 (247)
Q Consensus 145 ~~~~~avG~NC~-~p~~~~~~l~~l~~~~~~pl~v---yPNaG~--~~d~~~~~~~~~~~~~-~~~~~~~~~~-~~~~G~ 216 (247)
..++|+|-++.. +.+.|.++++. .+.-+.+ .-|.+. ..+.. . . ..+ .+...+.++. |.+.|.
T Consensus 102 ~lg~d~vTvh~~~G~~~l~~~~~~----~~~gv~vL~~tS~~~~~~~q~~~---~--~-~~~~~~~V~~~a~~~~~~~g~ 171 (255)
T 3qw3_A 102 HLNAHAITASPYMGSDSLQPFMRY----PDKAVFVLCKTSNKGSNDLQCLR---V--G-DRYLYEAVAERAEGPWNVNGN 171 (255)
T ss_dssp TSCCSEEEECCTTCHHHHHHHHTC----TTSEEEEEEECCSGGGGTTTTSE---E--T-TEEHHHHHHHHHHTGGGGGSC
T ss_pred HcCCCEEEEcccCCHHHHHHHHHh----hCCceEEEEeCCCccHHHHHhcc---c--C-CCCHHHHHHHHHHHHhhhhCC
Confidence 268999999997 67777777653 1222322 233321 11100 0 0 001 2445566666 765554
Q ss_pred eEEeecCCCC-hHHHHHHHHHhh
Q 025860 217 SLVGGCCRTT-PNTIKGIYRTLS 238 (247)
Q Consensus 217 ~iIGGCCGt~-P~hI~al~~~l~ 238 (247)
.|=-||.| |++++.|++.+.
T Consensus 172 --~GvV~~at~~~e~~~ir~~~~ 192 (255)
T 3qw3_A 172 --VGLVVGATDPVALARVRARAP 192 (255)
T ss_dssp --EEEEECSSCHHHHHHHHHHCS
T ss_pred --eEEEECCCCHHHHHHHHHHCC
Confidence 67778765 999999987764
No 291
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=62.69 E-value=72 Score=28.14 Aligned_cols=147 Identities=13% Similarity=0.110 Sum_probs=82.4
Q ss_pred CCHHHHH---HHHHHHHHHHhcCCCCEEEEecC---------------------CCH-H---HHHHHHHHHHhh-CCCCc
Q 025860 66 ITVETLK---DFHRRRVQVLVESAPDLIAFETI---------------------PNK-I---EAQAYAELLEEE-NIKIP 116 (247)
Q Consensus 66 ~s~~e~~---~~~~~q~~~l~~~gvD~i~~ET~---------------------~~~-~---E~~aa~~~~~~~-~~~~p 116 (247)
++.+|+. +.|.+.++.+.++|.|.|=+--- .++ . -+..+++++++. +.+ |
T Consensus 151 mt~~eI~~~i~~f~~aA~~a~~aGfDgVeih~a~gYLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~-p 229 (365)
T 2gou_A 151 MTKADIAQVIADYRQAALNAMEAGFDGIELHAANGYLINQFIDSEANNRSDEYGGSLENRLRFLDEVVAALVDAIGAE-R 229 (365)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSGGGCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGG-G
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCEEEEecccchhHhhccCCCccCcCcccCcchhhhHHHHHHHHHHHHHHcCCC-c
Confidence 5665554 56777777778899999865321 111 1 233445566553 334 8
Q ss_pred EEEEEEEcCC-CcccCCCcHHHH---HHHHHhCCCCeEEEEcCC----ChhHHHHHHHHHHhhcCCCEEEEeCCCCcccc
Q 025860 117 AWFSFNSKDG-VNVVSGDSLLEC---ASIAESCKRVVSVGINCT----PPRFISGLILIIKKVTAKPILIYPNSGEFYDA 188 (247)
Q Consensus 117 v~is~~~~~~-~~l~~G~~~~~~---~~~~~~~~~~~avG~NC~----~p~~~~~~l~~l~~~~~~pl~vyPNaG~~~d~ 188 (247)
|.+-++..+. ....+|.+++++ ++.+.+ .+++.|-+-.. .|..-..+++.+++..+.||++ |.|.
T Consensus 230 v~vris~~~~~~~~~~~~~~~~~~~~a~~l~~-~G~d~i~v~~~~~~~~~~~~~~~~~~i~~~~~iPvi~--~Ggi---- 302 (365)
T 2gou_A 230 VGVRLAPLTTLNGTVDADPILTYTAAAALLNK-HRIVYLHIAEVDWDDAPDTPVSFKRALREAYQGVLIY--AGRY---- 302 (365)
T ss_dssp EEEEECSSCCTTSCCCSSHHHHHHHHHHHHHH-TTCSEEEEECCBTTBCCCCCHHHHHHHHHHCCSEEEE--ESSC----
T ss_pred EEEEEccccccCCCCCCCCHHHHHHHHHHHHH-cCCCEEEEeCCCcCCCCCccHHHHHHHHHHCCCcEEE--eCCC----
Confidence 8887765331 112356666654 444555 58888887663 1211135677788888888653 3331
Q ss_pred cccccccCCCCChHHHHHHHHHHHHcC-CeEEeecCC--CChHHHHHHHH
Q 025860 189 DRKEWVQNTGVSDEDFVSYVSKWCEVG-ASLVGGCCR--TTPNTIKGIYR 235 (247)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~G-~~iIGGCCG--t~P~hI~al~~ 235 (247)
+++ .+.+.++.| +.+|+=+=+ ..|+-.+.+++
T Consensus 303 -----------~~~----~a~~~l~~g~aD~V~igR~~i~~P~l~~~~~~ 337 (365)
T 2gou_A 303 -----------NAE----KAEQAINDGLADMIGFGRPFIANPDLPERLRH 337 (365)
T ss_dssp -----------CHH----HHHHHHHTTSCSEEECCHHHHHCTTHHHHHHH
T ss_pred -----------CHH----HHHHHHHCCCcceehhcHHHHhCchHHHHHHc
Confidence 232 334466666 777763322 25666666553
No 292
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=62.69 E-value=25 Score=33.11 Aligned_cols=86 Identities=14% Similarity=0.120 Sum_probs=45.3
Q ss_pred HHHHHHHHhcCCCCEEEE-ecCCCHHHHHH----HHHHHHhhCCCCcEEEEEEEc-------CCCccc-CCCcHHHHHHH
Q 025860 75 HRRRVQVLVESAPDLIAF-ETIPNKIEAQA----YAELLEEENIKIPAWFSFNSK-------DGVNVV-SGDSLLECASI 141 (247)
Q Consensus 75 ~~~q~~~l~~~gvD~i~~-ET~~~~~E~~a----a~~~~~~~~~~~pv~is~~~~-------~~~~l~-~G~~~~~~~~~ 141 (247)
+.++++.++++||++|-+ |--.+..|... +.+..+++ +.|++|.=.++ +.-++. +..++.++ +.
T Consensus 27 l~~~ve~al~~Gv~~vQlR~K~~~~~~~~~~a~~l~~l~~~~--~v~liIND~~dlA~~~gAdGVHLgq~dl~~~~a-r~ 103 (540)
T 3nl6_A 27 LYGQVEAGLQNGVTLVQIREKDADTKFFIEEALQIKELCHAH--NVPLIINDRIDVAMAIGADGIHVGQDDMPIPMI-RK 103 (540)
T ss_dssp HHHHHHHHHHTTCSEEEECCSSSCTTHHHHHHHHHHHHHHHT--TCCEEECSCSHHHHHTTCSEEEECTTSSCHHHH-HH
T ss_pred HHHHHHHHHHCCCCEEEEecCCCCHHHHHHHHHHHHHHHHhc--CCEEEEeCcHHHHHHcCCCEEEEChhhcCHHHH-HH
Confidence 455788888899999977 43334444433 33344444 57887642111 011221 11233333 33
Q ss_pred HHhCCCCeEEEEcCCChhHHHHHH
Q 025860 142 AESCKRVVSVGINCTPPRFISGLI 165 (247)
Q Consensus 142 ~~~~~~~~avG~NC~~p~~~~~~l 165 (247)
+.. .+ .-||+.|..++.+..+.
T Consensus 104 ~lg-~~-~iiG~S~ht~eea~~A~ 125 (540)
T 3nl6_A 104 LVG-PD-MVIGWSVGFPEEVDELS 125 (540)
T ss_dssp HHC-TT-SEEEEEECSHHHHHHHH
T ss_pred HhC-CC-CEEEEECCCHHHHHHHH
Confidence 332 22 46899998777655443
No 293
>2fp4_B Succinyl-COA ligase [GDP-forming] beta-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.23.4.1 d.142.1.4 PDB: 2fpg_B* 2fpi_B* 2fpp_B* 1euc_B* 1eud_B*
Probab=62.14 E-value=54 Score=29.42 Aligned_cols=67 Identities=15% Similarity=0.186 Sum_probs=45.7
Q ss_pred CCHHHHHHHHHHHHHHHhcCCCCEEEEec---CCCHH-HHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHH
Q 025860 66 ITVETLKDFHRRRVQVLVESAPDLIAFET---IPNKI-EAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASI 141 (247)
Q Consensus 66 ~s~~e~~~~~~~q~~~l~~~gvD~i~~ET---~~~~~-E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~ 141 (247)
.+.+.+++.++-. +.+..||.+++-- +.+-. =++.+++++++.+.++|+++.+ .|+..++..+.
T Consensus 300 a~~e~~~~al~~i---l~d~~v~~ilvni~ggi~~~d~vA~gii~a~~~~~~~~Pivvrl---------~G~n~~~g~~~ 367 (395)
T 2fp4_B 300 VKESQVYQAFKLL---TADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRL---------EGTNVHEAQNI 367 (395)
T ss_dssp CCHHHHHHHHHHH---HHCTTCCEEEEEEEESSSCHHHHHHHHHHHHHHHTCCSCEEEEE---------EETTHHHHHHH
T ss_pred CCHHHHHHHHHHH---hCCCCCCEEEEEecCCccCcHHHHHHHHHHHHhcCCCCeEEEEc---------CCCCHHHHHHH
Confidence 4666666644422 3568899998644 34433 3577888888865579999865 57777888887
Q ss_pred HHh
Q 025860 142 AES 144 (247)
Q Consensus 142 ~~~ 144 (247)
+.+
T Consensus 368 L~~ 370 (395)
T 2fp4_B 368 LTN 370 (395)
T ss_dssp HHH
T ss_pred HHH
Confidence 766
No 294
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=62.02 E-value=8.1 Score=33.44 Aligned_cols=41 Identities=15% Similarity=0.135 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHhcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEE
Q 025860 72 KDFHRRRVQVLVESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAW 118 (247)
Q Consensus 72 ~~~~~~q~~~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~ 118 (247)
.+.-.++++++.++|+|.|++|-++. .+++.+ .++. ++|++
T Consensus 178 a~~~i~rA~a~~eAGA~~ivlE~vp~-~~a~~i---t~~l--~iP~i 218 (281)
T 1oy0_A 178 AEQTIADAIAVAEAGAFAVVMEMVPA-ELATQI---TGKL--TIPTV 218 (281)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEESCCH-HHHHHH---HHHC--SSCEE
T ss_pred HHHHHHHHHHHHHcCCcEEEEecCCH-HHHHHH---HHhC--CCCEE
Confidence 35566689999999999999999984 444433 3333 46755
No 295
>1dqu_A Isocitrate lyase; beta barrel; 2.80A {Emericella nidulans} SCOP: c.1.12.7
Probab=61.54 E-value=10 Score=35.83 Aligned_cols=59 Identities=17% Similarity=0.169 Sum_probs=39.0
Q ss_pred cCCCCEEEEecC-CCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCc---ccCCCcHHHHHHHHHh
Q 025860 84 ESAPDLIAFETI-PNKIEAQAYAELLEEENIKIPAWFSFNSKDGVN---VVSGDSLLECASIAES 144 (247)
Q Consensus 84 ~~gvD~i~~ET~-~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~---l~~G~~~~~~~~~~~~ 144 (247)
..++|+||+||= |++.+++...+.+++..+++ ++.+.+.+.-. -.+.+.+......+..
T Consensus 386 ap~aDliW~Et~~P~~~~a~~fa~~i~~~~P~~--~LaYN~SPSFnW~~~~~d~~~~~f~~~l~~ 448 (538)
T 1dqu_A 386 APFADLIWMESKLPDYKQAKEFADGVHAVWPEQ--KLAYNLSPSFNWKKAMPRDEQETYIKRLGA 448 (538)
T ss_dssp TTSCSEEECCCSSCCHHHHHHHHHHHHHHCTTC--EEEEECCSSSCGGGTSCHHHHHSHHHHHHH
T ss_pred CcccceEEeccCCCCHHHHHHHHHHHHHhCCCc--eEEecCCcchhhhhhCCHHHHHHHHHHHHh
Confidence 478999999997 99999999999999876554 34444433211 1344444545444443
No 296
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=61.54 E-value=79 Score=27.27 Aligned_cols=87 Identities=10% Similarity=-0.007 Sum_probs=54.9
Q ss_pred HHHHhcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEEcCCCh
Q 025860 79 VQVLVESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGINCTPP 158 (247)
Q Consensus 79 ~~~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~NC~~p 158 (247)
+.+..++|.-.++.-...+.++++..++.+++.. +.|+-+.+.+.+ ..+.+.++.+.+ .+++.|-++...|
T Consensus 43 a~av~~aGglG~i~~~~~~~~~l~~~i~~i~~~~-~~p~gVnl~~~~-------~~~~~~~~~~~~-~g~d~V~l~~g~p 113 (326)
T 3bo9_A 43 AAAVSEAGGLGIIGSGAMKPDDLRKAISELRQKT-DKPFGVNIILVS-------PWADDLVKVCIE-EKVPVVTFGAGNP 113 (326)
T ss_dssp HHHHHHTTSBEEEECTTCCHHHHHHHHHHHHTTC-SSCEEEEEETTS-------TTHHHHHHHHHH-TTCSEEEEESSCC
T ss_pred HHHHHhCCCcEEeCCCCCCHHHHHHHHHHHHHhc-CCCEEEEEeccC-------CCHHHHHHHHHH-CCCCEEEECCCCc
Confidence 4444556665555555567888888888888753 579988886521 235677777766 5788888888766
Q ss_pred hHHHHHHHHHHhhcCCCEEE
Q 025860 159 RFISGLILIIKKVTAKPILI 178 (247)
Q Consensus 159 ~~~~~~l~~l~~~~~~pl~v 178 (247)
..+ ++.+++. +.++++
T Consensus 114 ~~~---~~~l~~~-g~~v~~ 129 (326)
T 3bo9_A 114 TKY---IRELKEN-GTKVIP 129 (326)
T ss_dssp HHH---HHHHHHT-TCEEEE
T ss_pred HHH---HHHHHHc-CCcEEE
Confidence 433 3434332 445443
No 297
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=61.48 E-value=19 Score=30.50 Aligned_cols=155 Identities=15% Similarity=0.108 Sum_probs=83.0
Q ss_pred HHHHHHHHhcCCCCEEEEe-cCCC-------HHH-----------HHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcH
Q 025860 75 HRRRVQVLVESAPDLIAFE-TIPN-------KIE-----------AQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSL 135 (247)
Q Consensus 75 ~~~q~~~l~~~gvD~i~~E-T~~~-------~~E-----------~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~ 135 (247)
..+.++.|.++|+|+|=+- =+++ +++ ++.+++.+++.-.+.|+++.-.++ .....| +
T Consensus 30 t~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~g~~~~~~~~~~~~~r~~~Pivlm~Y~N--~i~~~G--~ 105 (252)
T 3tha_A 30 SEAFLQRLDQSPIDILELGVAYSDPIADGEIIADAAKIALDQGVDIHSVFELLARIKTKKALVFMVYYN--LIFSYG--L 105 (252)
T ss_dssp HHHHHHTGGGSSCSEEEEECCCSCCCSCCCHHHHHHHHHHHTTCCHHHHHHHHHHCCCSSEEEEECCHH--HHHHHC--H
T ss_pred HHHHHHHHHHcCCCEEEECCCCCCCCCCcHHHHHHHHHHHHCCCCHHHHHHHHHHHhcCCCEEEEeccC--HHHHhh--H
Confidence 3348888999999998322 1111 111 123445555543246877544332 222334 4
Q ss_pred HHHHHHHHhCCCCeEEEEcCCChhHHHHHHHHHHhhc-CCCEEEEeCCCC--c--ccccccccc---cCC---CCC---h
Q 025860 136 LECASIAESCKRVVSVGINCTPPRFISGLILIIKKVT-AKPILIYPNSGE--F--YDADRKEWV---QNT---GVS---D 201 (247)
Q Consensus 136 ~~~~~~~~~~~~~~avG~NC~~p~~~~~~l~~l~~~~-~~pl~vyPNaG~--~--~d~~~~~~~---~~~---~~~---~ 201 (247)
+..++.+.+ .|++++-+.=-.++....+.+..+++- +.-.++-|+... . .......|. +.. ... +
T Consensus 106 e~F~~~~~~-aGvdG~IipDLP~eE~~~~~~~~~~~Gl~~I~lvaP~t~~eRi~~ia~~a~gFiY~Vs~~GvTG~~~~~~ 184 (252)
T 3tha_A 106 EKFVKKAKS-LGICALIVPELSFEESDDLIKECERYNIALITLVSVTTPKERVKKLVKHAKGFIYLLASIGITGTKSVEE 184 (252)
T ss_dssp HHHHHHHHH-TTEEEEECTTCCGGGCHHHHHHHHHTTCEECEEEETTSCHHHHHHHHTTCCSCEEEECCSCSSSCSHHHH
T ss_pred HHHHHHHHH-cCCCEEEeCCCCHHHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHHHHHhCCCeEEEEecCCCCCcccCCC
Confidence 677777777 589999998888887777777666542 222457777631 1 001111221 110 111 2
Q ss_pred HHHHHHHHHHHHc-C-CeEEeecCCCChHHHHHHHH
Q 025860 202 EDFVSYVSKWCEV-G-ASLVGGCCRTTPNTIKGIYR 235 (247)
Q Consensus 202 ~~~~~~~~~~~~~-G-~~iIGGCCGt~P~hI~al~~ 235 (247)
+...+++++.++. . .-++|+- =.+|+|++++.+
T Consensus 185 ~~~~~~v~~vr~~~~~Pv~vGfG-Ist~e~a~~~~~ 219 (252)
T 3tha_A 185 AILQDKVKEIRSFTNLPIFVGFG-IQNNQDVKRMRK 219 (252)
T ss_dssp HHHHHHHHHHHTTCCSCEEEESS-CCSHHHHHHHTT
T ss_pred HHHHHHHHHHHHhcCCcEEEEcC-cCCHHHHHHHHh
Confidence 2344555555543 3 4445542 347999998864
No 298
>3mcm_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase/dihydropteroate...; folate, TIM barrel, synthase, HPPK, DHPS; 2.20A {Francisella tularensis subsp} PDB: 3mcn_A* 3mco_A*
Probab=61.46 E-value=99 Score=28.33 Aligned_cols=159 Identities=14% Similarity=0.090 Sum_probs=75.7
Q ss_pred CCeEEEEecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCEEEEe---c------CCCHHHHHHH---
Q 025860 37 RPILVAASVGSYGAYLADGSEYSGNYGDAITVETLKDFHRRRVQVLVESAPDLIAFE---T------IPNKIEAQAY--- 104 (247)
Q Consensus 37 ~~~~VaGsiGP~g~~l~~g~eY~g~y~~~~s~~e~~~~~~~q~~~l~~~gvD~i~~E---T------~~~~~E~~aa--- 104 (247)
.+.+|-|-+-=+-.++.||. + +.+++.+ +++.+++.|+|+|=+- | ++.-+|++-+
T Consensus 189 ~~~~vMGIlNvTPDSFsDgg-~--------~~~~al~----~A~~mv~~GAdIIDIGgeSTrPGa~~Vs~~EE~~Rv~pv 255 (442)
T 3mcm_A 189 ANTIRMGIVNLSNQSFSDGN-F--------DDNQRKL----NLDELIQSGAEIIDIGAESTKPDAKPISIEEEFNKLNEF 255 (442)
T ss_dssp CSSEEEEEEECSSCC-CCCS-S--------CCCHHHH----HHHHHHHHTCSEEEEECCCCCC----CCHHHHHHHHHHH
T ss_pred CCceEEEEEeCCCCCCCCCC-C--------CHHHHHH----HHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHH
Confidence 46788888776766776654 1 2244444 6777778999999654 2 2334566655
Q ss_pred HHHHHhhCCC--CcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEEcCCChhHHHHHHHHHHhhcCCCEEEEeCC
Q 025860 105 AELLEEENIK--IPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGINCTPPRFISGLILIIKKVTAKPILIYPNS 182 (247)
Q Consensus 105 ~~~~~~~~~~--~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~NC~~p~~~~~~l~~l~~~~~~pl~vyPNa 182 (247)
++.+++..+. ..+.+|+.... -+-++++++.. .|++. -||=..-.....+++.+++ .+.|++++.+.
T Consensus 256 I~~l~~~~~~~~~~vpISIDT~~------~~VaeaAL~~~---aGa~i-~INDVsg~~d~~m~~v~a~-~g~~vVlMh~~ 324 (442)
T 3mcm_A 256 LEYFKSQLANLIYKPLVSIDTRK------LEVMQKILAKH---HDIIW-MINDVECNNIEQKAQLIAK-YNKKYVIIHNL 324 (442)
T ss_dssp HHHHHHHTTTCSSCCEEEEECCC------HHHHHHHHHHH---GGGCC-EEEECCCTTHHHHHHHHHH-HTCEEEEECC-
T ss_pred HHHHHhhccccCCCCeEEEeCCC------HHHHHHHHhhC---CCCCE-EEEcCCCCCChHHHHHHHH-hCCeEEEECCC
Confidence 4555541112 24667775321 11222233211 24432 2344311222334443433 37899999999
Q ss_pred CCcccccccccccCCCCChHHHHHHHHHHHHcCC---eEE
Q 025860 183 GEFYDADRKEWVQNTGVSDEDFVSYVSKWCEVGA---SLV 219 (247)
Q Consensus 183 G~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~---~iI 219 (247)
|.+.+.....|..--..--..+.+.+....++|+ +||
T Consensus 325 G~P~tmq~~~y~dvv~ev~~~l~~~i~~a~~aGI~~~~Ii 364 (442)
T 3mcm_A 325 GITDRNQYLDKENAIDNVCDYIEQKKQILLKHGIAQQNIY 364 (442)
T ss_dssp ---------------CTHHHHHHHHHHHHHHHTCCGGGEE
T ss_pred CCCccccccCcccHHHHHHHHHHHHHHHHHHcCCCHHHEE
Confidence 8643221111111000012345666777888898 455
No 299
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=61.34 E-value=54 Score=28.04 Aligned_cols=63 Identities=19% Similarity=0.215 Sum_probs=28.7
Q ss_pred HHHHHHhcCCCCEEEEe-cC--CCHHHHHHHHHHHHhhCCCCc-EEEEEEEcCCCcccCCCcHHHHHHHHH
Q 025860 77 RRVQVLVESAPDLIAFE-TI--PNKIEAQAYAELLEEENIKIP-AWFSFNSKDGVNVVSGDSLLECASIAE 143 (247)
Q Consensus 77 ~q~~~l~~~gvD~i~~E-T~--~~~~E~~aa~~~~~~~~~~~p-v~is~~~~~~~~l~~G~~~~~~~~~~~ 143 (247)
+.++.+.+.|+|.|.+= |+ ..+.++...++.+++.-++.+ +-++|.+.++ .|..++.++..+.
T Consensus 154 ~~~~~~~~~G~~~i~l~DT~G~~~P~~v~~lv~~l~~~~~~~~~~~l~~H~Hnd----~Gla~AN~laA~~ 220 (293)
T 3ewb_X 154 EAVQTAIDAGATVINIPDTVGYTNPTEFGQLFQDLRREIKQFDDIIFASHCHDD----LGMATANALAAIE 220 (293)
T ss_dssp HHHHHHHHTTCCEEEEECSSSCCCHHHHHHHHHHHHHHCTTGGGSEEEEECBCT----TSCHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEecCCCCCCCHHHHHHHHHHHHHhcCCccCceEEEEeCCC----cChHHHHHHHHHH
Confidence 34444555566555433 32 244455555555554321221 4455555443 3444555544443
No 300
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=61.23 E-value=52 Score=29.61 Aligned_cols=100 Identities=13% Similarity=0.137 Sum_probs=57.8
Q ss_pred HHHHHHHHHHhcCCCCEEEEecCCCHHHHHHHHH-----------------HHHhh-CCCCcEEEEEEEcCCCcccCCCc
Q 025860 73 DFHRRRVQVLVESAPDLIAFETIPNKIEAQAYAE-----------------LLEEE-NIKIPAWFSFNSKDGVNVVSGDS 134 (247)
Q Consensus 73 ~~~~~q~~~l~~~gvD~i~~ET~~~~~E~~aa~~-----------------~~~~~-~~~~pv~is~~~~~~~~l~~G~~ 134 (247)
++|++..+...+.|++++ =|..+...+..+.+ ++++. ..++||++|- |. .+=+.
T Consensus 101 e~~~~L~~~~~~~Gi~~~--stpfD~~svd~l~~~~vd~~KIgS~~~~N~pLL~~va~~gKPViLSt-----Gm-aTl~E 172 (385)
T 1vli_A 101 EWILPLLDYCREKQVIFL--STVCDEGSADLLQSTSPSAFKIASYEINHLPLLKYVARLNRPMIFST-----AG-AEISD 172 (385)
T ss_dssp GGHHHHHHHHHHTTCEEE--CBCCSHHHHHHHHTTCCSCEEECGGGTTCHHHHHHHHTTCSCEEEEC-----TT-CCHHH
T ss_pred HHHHHHHHHHHHcCCcEE--EccCCHHHHHHHHhcCCCEEEECcccccCHHHHHHHHhcCCeEEEEC-----CC-CCHHH
Confidence 345555555556666554 46666666665432 22322 1368999886 22 12233
Q ss_pred HHHHHHHHHhCCCCeEEEEcCCC--h---hH-HHHHHHHHHhhc-CCCEEEEeC
Q 025860 135 LLECASIAESCKRVVSVGINCTP--P---RF-ISGLILIIKKVT-AKPILIYPN 181 (247)
Q Consensus 135 ~~~~~~~~~~~~~~~avG~NC~~--p---~~-~~~~l~~l~~~~-~~pl~vyPN 181 (247)
+..+++.+.....-..+.+-|+. | +. =+..+..|++.. +.|+ .||.
T Consensus 173 i~~Ave~i~~~Gn~~iiLlhc~s~YPtp~~~~nL~aI~~Lk~~f~~lpV-G~Sd 225 (385)
T 1vli_A 173 VHEAWRTIRAEGNNQIAIMHCVAKYPAPPEYSNLSVIPMLAAAFPEAVI-GFSD 225 (385)
T ss_dssp HHHHHHHHHTTTCCCEEEEEECSSSSCCGGGCCTTHHHHHHHHSTTSEE-EEEE
T ss_pred HHHHHHHHHHCCCCcEEEEeccCCCCCChhhcCHHHHHHHHHHcCCCCE-EeCC
Confidence 44567767653233788888963 2 22 255677787777 7898 5776
No 301
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=61.22 E-value=13 Score=33.01 Aligned_cols=74 Identities=15% Similarity=0.174 Sum_probs=45.5
Q ss_pred HHHHHHhCCCCeEEEEcCCC---------h-----------------hHHHHHHHHHHhhc--CCCEEEEeCCCCccccc
Q 025860 138 CASIAESCKRVVSVGINCTP---------P-----------------RFISGLILIIKKVT--AKPILIYPNSGEFYDAD 189 (247)
Q Consensus 138 ~~~~~~~~~~~~avG~NC~~---------p-----------------~~~~~~l~~l~~~~--~~pl~vyPNaG~~~d~~ 189 (247)
+++.+.+ .|.|+|=|||.+ | ..+.++++.+++.. +.||++.-+.....+.
T Consensus 163 aA~~a~~-aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~d~pV~vRis~~~~~~~- 240 (363)
T 3l5l_A 163 AARRARD-AGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREVWPENLPLTARFGVLEYDGR- 240 (363)
T ss_dssp HHHHHHH-HTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTTSCTTSCEEEEEEEECSSSC-
T ss_pred HHHHHHH-cCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHHHHcCCCceEEEEecchhcCCC-
Confidence 3443444 589999999863 2 13456667777665 5789988776432111
Q ss_pred ccccccCCCCChHHHHHHHHHHHHcCCeEEe
Q 025860 190 RKEWVQNTGVSDEDFVSYVSKWCEVGASLVG 220 (247)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~iIG 220 (247)
..| +.+++.+.++.+.+.|+.+|-
T Consensus 241 -G~~------~~~~~~~la~~L~~~Gvd~i~ 264 (363)
T 3l5l_A 241 -DEQ------TLEESIELARRFKAGGLDLLS 264 (363)
T ss_dssp -HHH------HHHHHHHHHHHHHHTTCCEEE
T ss_pred -CCC------CHHHHHHHHHHHHHcCCCEEE
Confidence 002 246677777778888877653
No 302
>2uwf_A Endoxylanase, alkaline active endoxylanase; hydrolase, xylan degradation, xylanase structure, glycosidase, alkaliphilic; 2.10A {Bacillus halodurans} PDB: 2f8q_A 2fgl_A*
Probab=60.78 E-value=17 Score=32.26 Aligned_cols=51 Identities=16% Similarity=0.146 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHhcCC--CCEEEEec-----CCCHHHHHHHHHHHHhhCCCCcEEEE-EEEc
Q 025860 72 KDFHRRRVQVLVESA--PDLIAFET-----IPNKIEAQAYAELLEEENIKIPAWFS-FNSK 124 (247)
Q Consensus 72 ~~~~~~q~~~l~~~g--vD~i~~ET-----~~~~~E~~aa~~~~~~~~~~~pv~is-~~~~ 124 (247)
.+.+...++.|.+.| +|.|-+.. .+++.+++.+++.+... ++||||| +.+.
T Consensus 201 ~~~~~~~v~~l~~~G~~idgiG~Q~H~~~~~p~~~~~~~~l~~~a~~--Gl~i~iTElDi~ 259 (356)
T 2uwf_A 201 RDDLYNLVKDLLEQGVPIDGVGHQSHIQIGWPSIEDTRASFEKFTSL--GLDNQVTELDMS 259 (356)
T ss_dssp HHHHHHHHHHHHHTTCCCCEEEECCEEESSCSCHHHHHHHHHHHHTT--TCEEEEEEEEEE
T ss_pred hHHHHHHHHHHHHCCCcccEEEEEEecCCCCCCHHHHHHHHHHHHhc--CCcEEEEecccc
Confidence 344666888888888 59997754 37889999999988876 5899998 5543
No 303
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=60.53 E-value=3.7 Score=35.86 Aligned_cols=64 Identities=14% Similarity=0.076 Sum_probs=35.7
Q ss_pred HHHHHHHhcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEEcC
Q 025860 76 RRRVQVLVESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGINC 155 (247)
Q Consensus 76 ~~q~~~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~NC 155 (247)
...++.+.++|+|+| -++- .......++.+++...+.++++.. .++.++.+.+. .+++.||+|=
T Consensus 90 ide~qil~aaGAD~I-d~s~--~~~~~~li~~i~~~~~g~~vvv~v-----------~~~~Ea~~a~~--~Gad~I~v~g 153 (297)
T 4adt_A 90 FVEAQILEELKVDML-DESE--VLTMADEYNHINKHKFKTPFVCGC-----------TNLGEALRRIS--EGASMIRTKG 153 (297)
T ss_dssp HHHHHHHHHTTCSEE-EEET--TSCCSCSSCCCCGGGCSSCEEEEE-----------SSHHHHHHHHH--HTCSEEEECC
T ss_pred HHHHHHHHHcCCCEE-EcCC--CCCHHHHHHHHHhcCCCCeEEEEe-----------CCHHHHHHHHh--CCCCEEEECC
Confidence 345566667999999 3321 111111223334422257887743 24566666554 3789999993
No 304
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=60.07 E-value=49 Score=29.49 Aligned_cols=42 Identities=19% Similarity=0.078 Sum_probs=31.4
Q ss_pred HHHHHHHHhCCCCeEEEEcCC--ChhHHHHHHHHHHhhc-CCCEEE
Q 025860 136 LECASIAESCKRVVSVGINCT--PPRFISGLILIIKKVT-AKPILI 178 (247)
Q Consensus 136 ~~~~~~~~~~~~~~avG~NC~--~p~~~~~~l~~l~~~~-~~pl~v 178 (247)
.+.++.+.+ .++++|-+|++ .|....+.++.+++.. +.|+++
T Consensus 155 ~~~a~~~~~-~G~d~i~i~~~~g~~~~~~e~i~~ir~~~~~~pviv 199 (404)
T 1eep_A 155 IERVEELVK-AHVDILVIDSAHGHSTRIIELIKKIKTKYPNLDLIA 199 (404)
T ss_dssp HHHHHHHHH-TTCSEEEECCSCCSSHHHHHHHHHHHHHCTTCEEEE
T ss_pred HHHHHHHHH-CCCCEEEEeCCCCChHHHHHHHHHHHHHCCCCeEEE
Confidence 444455555 58999999986 4777888888888887 788876
No 305
>1r85_A Endo-1,4-beta-xylanase; hydrolase; HET: GOL; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 1hiz_A* 1r87_A* 3mmd_A* 1r86_A
Probab=59.97 E-value=18 Score=32.34 Aligned_cols=51 Identities=14% Similarity=0.135 Sum_probs=39.1
Q ss_pred HHHHHHHHHHhcCCC--CEEEEec-----CCCHHHHHHHHHHHHhhCCCCcEEEE-EEEcC
Q 025860 73 DFHRRRVQVLVESAP--DLIAFET-----IPNKIEAQAYAELLEEENIKIPAWFS-FNSKD 125 (247)
Q Consensus 73 ~~~~~q~~~l~~~gv--D~i~~ET-----~~~~~E~~aa~~~~~~~~~~~pv~is-~~~~~ 125 (247)
+.+..+++.|.+.|+ |.|-+.. .+++.+++..++.+... ++||||| +.+..
T Consensus 212 ~~~~~~v~~l~~~g~piDgIG~Q~H~~~~~p~~~~~~~~l~~~a~l--GlpI~iTElDi~~ 270 (379)
T 1r85_A 212 TALYNLVKQLKEEGVPIDGIGHQSHIQIGWPSEAEIEKTINMFAAL--GLDNQITELDVSM 270 (379)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEECCEECSSSSCHHHHHHHHHHHHHT--TCEEEEEEEEECS
T ss_pred HHHHHHHHHHHHCCCceeEEEEeEEecCCCCCHHHHHHHHHHHHhc--CCeEEEeeccccC
Confidence 455568888888885 9998863 36789999999988877 5899998 55543
No 306
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=59.81 E-value=37 Score=31.22 Aligned_cols=64 Identities=11% Similarity=0.035 Sum_probs=45.6
Q ss_pred HHHHHhcCCCCEEEEe-cCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEEcCC
Q 025860 78 RVQVLVESAPDLIAFE-TIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGINCT 156 (247)
Q Consensus 78 q~~~l~~~gvD~i~~E-T~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~NC~ 156 (247)
|+..+...|+|.+++- |+-+..+++..++.+++. ++-+++-+. +.+++-+.+. .+++.||+|=.
T Consensus 122 Qi~ea~~~GAD~ILLi~a~l~~~~l~~l~~~a~~l--gm~~LvEvh-----------~~eE~~~A~~--lga~iIGinnr 186 (452)
T 1pii_A 122 QIYLARYYQADACLLMLSVLDDDQYRQLAAVAHSL--EMGVLTEVS-----------NEEEQERAIA--LGAKVVGINNR 186 (452)
T ss_dssp HHHHHHHTTCSEEEEETTTCCHHHHHHHHHHHHHT--TCEEEEEEC-----------SHHHHHHHHH--TTCSEEEEESE
T ss_pred HHHHHHHcCCCEEEEEcccCCHHHHHHHHHHHHHc--CCeEEEEeC-----------CHHHHHHHHH--CCCCEEEEeCC
Confidence 4555667999998776 666667888899988887 466665552 4466655443 47999999973
No 307
>3ufx_B Succinyl-COA synthetase beta subunit; ATP-grAsp fold, ligase; HET: GDP; 2.35A {Thermus aquaticus}
Probab=59.81 E-value=45 Score=29.96 Aligned_cols=85 Identities=14% Similarity=0.153 Sum_probs=51.9
Q ss_pred CCHHHHHHHHHHHHHHH-hcCCCCEEEEecC---CCHHH-HHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHH
Q 025860 66 ITVETLKDFHRRRVQVL-VESAPDLIAFETI---PNKIE-AQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECAS 140 (247)
Q Consensus 66 ~s~~e~~~~~~~q~~~l-~~~gvD~i~~ET~---~~~~E-~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~ 140 (247)
.+.+.+++ -++.+ .+.+||.+++-.+ .+..+ ++.+++++++.+.++|+++.|. |+...+..+
T Consensus 284 a~~e~~~~----al~~~l~d~~v~~ilv~i~ggi~~~~~vA~~i~~a~~~~~~~kPvvv~~~---------G~~~~~~~~ 350 (397)
T 3ufx_B 284 AKADVVYN----ALKVVLKDPDVKGVFINIFGGITRADEVAKGVIRALEEGLLTKPVVMRVA---------GTAEEEAKK 350 (397)
T ss_dssp CCHHHHHH----HHHHHHTCTTCCEEEEEEEEEEEESHHHHHHHHHHHTTTCCCSCEEEEEE---------EECHHHHHH
T ss_pred CCHHHHHH----HHHHHHcCCCCCEEEEECCCCCCCHHHHHHHHHHHHHhhCCCCcEEEEcc---------CCCHHHHHH
Confidence 46665444 44444 5678999886332 22233 4677788877655799999883 667777777
Q ss_pred HHHhCCCCeEEEEcCCChhHHHHHHHHH
Q 025860 141 IAESCKRVVSVGINCTPPRFISGLILII 168 (247)
Q Consensus 141 ~~~~~~~~~avG~NC~~p~~~~~~l~~l 168 (247)
.+.+ .+ | -.+..|+.....+-.+
T Consensus 351 ~l~~-~g---i-p~~~~~e~Aa~~~~~l 373 (397)
T 3ufx_B 351 LLEG-KP---V-YMYPTSIEAAKVTVAM 373 (397)
T ss_dssp HTTT-SS---E-EECSSHHHHHHHHHHS
T ss_pred HHHh-CC---C-cccCCHHHHHHHHHHH
Confidence 7765 34 1 2344677655554444
No 308
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=59.33 E-value=86 Score=26.96 Aligned_cols=44 Identities=18% Similarity=0.209 Sum_probs=35.1
Q ss_pred CChHHHHHHHHHHHHcCCeEEeec--C-CCChHHHHHHHHHhhCCCC
Q 025860 199 VSDEDFVSYVSKWCEVGASLVGGC--C-RTTPNTIKGIYRTLSNRSS 242 (247)
Q Consensus 199 ~~~~~~~~~~~~~~~~G~~iIGGC--C-Gt~P~hI~al~~~l~~~~~ 242 (247)
.+++++.+.++...+.|+..|.=| - ..+|..+..+-+.+++..|
T Consensus 154 ~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~~~ 200 (307)
T 1ydo_A 154 VPIEQVIRLSEALFEFGISELSLGDTIGAANPAQVETVLEALLARFP 200 (307)
T ss_dssp CCHHHHHHHHHHHHHHTCSCEEEECSSCCCCHHHHHHHHHHHHTTSC
T ss_pred CCHHHHHHHHHHHHhcCCCEEEEcCCCCCcCHHHHHHHHHHHHHhCC
Confidence 468889999999999999887644 2 3589999999888876544
No 309
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=59.32 E-value=52 Score=27.17 Aligned_cols=104 Identities=13% Similarity=0.086 Sum_probs=58.0
Q ss_pred HHHHHhcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCC------cEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEE
Q 025860 78 RVQVLVESAPDLIAFETIPNKIEAQAYAELLEEENIKI------PAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSV 151 (247)
Q Consensus 78 q~~~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~------pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~av 151 (247)
|++..+++|+|||+- |.+.+ .+++.+++. ++ |++--. .++.|+...+. .|++.|
T Consensus 77 ~a~~ai~AGA~fivs---P~~~~--evi~~~~~~--~v~~~~~~~~~PG~-----------~TptE~~~A~~--~Gad~v 136 (217)
T 3lab_A 77 DFQKAIDAGAQFIVS---PGLTP--ELIEKAKQV--KLDGQWQGVFLPGV-----------ATASEVMIAAQ--AGITQL 136 (217)
T ss_dssp HHHHHHHHTCSEEEE---SSCCH--HHHHHHHHH--HHHCSCCCEEEEEE-----------CSHHHHHHHHH--TTCCEE
T ss_pred HHHHHHHcCCCEEEe---CCCcH--HHHHHHHHc--CCCccCCCeEeCCC-----------CCHHHHHHHHH--cCCCEE
Confidence 555566788888874 43322 334445554 35 555322 47788888665 478988
Q ss_pred EEcCCChhHHHHHHHHHHhhcCCCEEEEeCCCCcccccccccccCCCCChHHHHHHHHHHHHcCCeEEee
Q 025860 152 GINCTPPRFISGLILIIKKVTAKPILIYPNSGEFYDADRKEWVQNTGVSDEDFVSYVSKWCEVGASLVGG 221 (247)
Q Consensus 152 G~NC~~p~~~~~~l~~l~~~~~~pl~vyPNaG~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~iIGG 221 (247)
.+-=..+-.=...|+.++.... .+-+.|-+|. ++ +.+.+|++.|+.+++|
T Consensus 137 K~FPa~~~gG~~~lkal~~p~p-~i~~~ptGGI---------------~~----~N~~~~l~aGa~~~vg 186 (217)
T 3lab_A 137 KCFPASAIGGAKLLKAWSGPFP-DIQFCPTGGI---------------SK----DNYKEYLGLPNVICAG 186 (217)
T ss_dssp EETTTTTTTHHHHHHHHHTTCT-TCEEEEBSSC---------------CT----TTHHHHHHSTTBCCEE
T ss_pred EECccccccCHHHHHHHHhhhc-CceEEEeCCC---------------CH----HHHHHHHHCCCEEEEE
Confidence 8742221111467777765431 1334455542 33 3456689999755433
No 310
>3r79_A Uncharacterized protein; PSI-biology, structural genomics, NEW YORK structural genomi research consortium, TIM barrel; HET: PLP; 1.90A {Agrobacterium tumefaciens}
Probab=59.27 E-value=71 Score=26.65 Aligned_cols=92 Identities=17% Similarity=0.151 Sum_probs=55.7
Q ss_pred EEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHH---HhCCCCeEEEEcCCC-----hhHHH
Q 025860 91 AFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIA---ESCKRVVSVGINCTP-----PRFIS 162 (247)
Q Consensus 91 ~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~---~~~~~~~avG~NC~~-----p~~~~ 162 (247)
++.|+.+++.++.+-+.+++.+..++|++.+.... ...+.|.+.+++...+ ....++...|+-+-. |+..-
T Consensus 100 ~i~sVds~~~a~~L~~~a~~~g~~~~V~LqVdtG~-e~~R~Gv~~ee~~~l~~~i~~l~~L~l~GlmTh~a~~dd~~~~f 178 (244)
T 3r79_A 100 VVESIDREKIARALSEECARQGRSLRFYVQVNTGL-EPQKAGIDPRETVAFVAFCRDELKLPVEGLMCIPPAEENPGPHF 178 (244)
T ss_dssp EEEEECSHHHHHHHHHHHHHHTCCCEEEEEBCTTC-CTTSCSBCHHHHHHHHHHHHHTSCCCCCEEECCCCTTSCSHHHH
T ss_pred EEEeeCCHHHHHHHHHHHHHcCCCceEEEEEECCC-CcCCCCCCHHHHHHHHHHHHcCCCCEEEEEEecCCCCCCHHHHH
Confidence 35899999999988888777765678887776431 1456787777655443 444567777887642 33333
Q ss_pred HHHHHHHhhcCCCEEEEeCCC
Q 025860 163 GLILIIKKVTAKPILIYPNSG 183 (247)
Q Consensus 163 ~~l~~l~~~~~~pl~vyPNaG 183 (247)
..|..+.+....+.+-.-|++
T Consensus 179 ~~l~~l~~~l~~~~lSmGmS~ 199 (244)
T 3r79_A 179 ALLAKLAGQCGLEKLSMGMSG 199 (244)
T ss_dssp HHHHHHHHHHTCCEEECCCTT
T ss_pred HHHHHHHHhCCCCEEEeecch
Confidence 344445444344444444433
No 311
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=59.05 E-value=23 Score=30.14 Aligned_cols=90 Identities=17% Similarity=0.227 Sum_probs=47.0
Q ss_pred HHHHHhcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEE-EEcC-
Q 025860 78 RVQVLVESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSV-GINC- 155 (247)
Q Consensus 78 q~~~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~av-G~NC- 155 (247)
-++.+.++|+|.+++=-++. +|....++.+++.+ ++.+.-+ .+-++.+.+-.......+...+ .++-
T Consensus 111 f~~~~~~aG~dGviv~Dl~~-ee~~~~~~~~~~~g--l~~i~li--------ap~s~~eri~~ia~~~~gfiy~vs~~G~ 179 (271)
T 1ujp_A 111 FFGLFKQAGATGVILPDLPP-DEDPGLVRLAQEIG--LETVFLL--------APTSTDARIATVVRHATGFVYAVSVTGV 179 (271)
T ss_dssp HHHHHHHHTCCEEECTTCCG-GGCHHHHHHHHHHT--CEEECEE--------CTTCCHHHHHHHHTTCCSCEEEECC---
T ss_pred HHHHHHHcCCCEEEecCCCH-HHHHHHHHHHHHcC--CceEEEe--------CCCCCHHHHHHHHHhCCCCEEEEecCcc
Confidence 44556678999777655553 77788888888874 4433211 1223444333333333344422 1111
Q ss_pred CC-----hhHHHHHHHHHHhhcCCCEEE
Q 025860 156 TP-----PRFISGLILIIKKVTAKPILI 178 (247)
Q Consensus 156 ~~-----p~~~~~~l~~l~~~~~~pl~v 178 (247)
++ +.....+++++++..+.|+++
T Consensus 180 TG~~~~~~~~~~~~v~~vr~~~~~Pv~v 207 (271)
T 1ujp_A 180 TGMRERLPEEVKDLVRRIKARTALPVAV 207 (271)
T ss_dssp ---------CCHHHHHHHHTTCCSCEEE
T ss_pred cCCCCCCCccHHHHHHHHHhhcCCCEEE
Confidence 12 223356788888877888643
No 312
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A
Probab=58.63 E-value=90 Score=26.99 Aligned_cols=109 Identities=12% Similarity=0.086 Sum_probs=57.7
Q ss_pred HHHHHHHHHHHHHhcCC--CCEEE--EecCC----------CHHHH----HHHHHHHHhhC--CCCcEEEEEEEcCCCcc
Q 025860 70 TLKDFHRRRVQVLVESA--PDLIA--FETIP----------NKIEA----QAYAELLEEEN--IKIPAWFSFNSKDGVNV 129 (247)
Q Consensus 70 e~~~~~~~q~~~l~~~g--vD~i~--~ET~~----------~~~E~----~aa~~~~~~~~--~~~pv~is~~~~~~~~l 129 (247)
.++++-+..++.|.+.| ||++. -|... +...+ +++.+++|+.. ++.++.+.+. ...
T Consensus 109 ~~~~yt~~v~~~l~~~g~~v~~v~vGNE~~~G~lwp~g~~~~~~~l~~~~~~a~~avr~~~~~p~~~v~~h~~--~~~-- 184 (334)
T 1fob_A 109 QLYNYTLEVCNTFAENDIDIEIISIGNEIRAGLLWPLGETSSYSNIGALLHSGAWGVKDSNLATTPKIMIHLD--DGW-- 184 (334)
T ss_dssp HHHHHHHHHHHHHHHTTCCCSEEEESSSGGGCSSBTTTSTTCHHHHHHHHHHHHHHHHTSCCSSCCEEEEEES--CTT--
T ss_pred HHHHHHHHHHHHHHhCCCCCCEEEEeecCcccccCCCCcchhHHHHHHHHHHHHHHHHHhccCCCCeEEEEcC--CcC--
Confidence 34445556777787776 56652 24322 12222 34455677764 4556555442 210
Q ss_pred cCCCcHHHHHHHHHhCC-----CCeEEEEcCC---C----hhHHHHHHHHHHhhcCCCEEEEeCCC
Q 025860 130 VSGDSLLECASIAESCK-----RVVSVGINCT---P----PRFISGLILIIKKVTAKPILIYPNSG 183 (247)
Q Consensus 130 ~~G~~~~~~~~~~~~~~-----~~~avG~NC~---~----p~~~~~~l~~l~~~~~~pl~vyPNaG 183 (247)
+-..+......+.... ..|.||+|.- . ++.+...|+.+.+.-++||++-=++-
T Consensus 185 -~~~~~~~~~~~~~~~g~~~~~~~DvIG~syYp~w~~~~~~~~l~~~l~~~~~rygKpv~itEtG~ 249 (334)
T 1fob_A 185 -SWDQQNYFYETVLATGELLSTDFDYFGVSYYPFYSASATLASLKTSLANLQSTYDKPVVVVETNW 249 (334)
T ss_dssp -CHHHHHHHHHHHHHTSSSCGGGCCEEEEECCSSSCTTCCHHHHHHHHHHHHHHHCCCEEEEECCC
T ss_pred -chHHHHHHHHHHHHcCCCCCCCcCEEEEeCCCCcCCCCCHHHHHHHHHHHHHHHCCCEEEEEccc
Confidence 1011111222222212 4799999983 2 45667777777555689998766553
No 313
>2fds_A Orotidine-monophosphate-decarboxylase; TIM barrel, structural genomics, structural genomics consortium, SGC, unknown function; 1.72A {Plasmodium berghei} SCOP: c.1.2.3 PDB: 2aqw_A
Probab=58.57 E-value=16 Score=32.63 Aligned_cols=151 Identities=11% Similarity=0.044 Sum_probs=80.8
Q ss_pred HHHHHHHHHHhcCCCCEE-----EEecCC--CHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhC
Q 025860 73 DFHRRRVQVLVESAPDLI-----AFETIP--NKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESC 145 (247)
Q Consensus 73 ~~~~~q~~~l~~~gvD~i-----~~ET~~--~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~ 145 (247)
+|-+..++.+.+ .|+++ +||... -+..++..++.+++. +.+|+.-+-+.|-+ .+...+++.+.+.
T Consensus 106 ~f~~~iida~~~-~v~~vKvg~~lf~~~G~~gv~~L~~~i~~lk~~--g~~VflDlK~~DIg-----nTv~~ya~a~~~~ 177 (352)
T 2fds_A 106 HFCFYIINNTKE-YALIYKMNFAFYIPYGSVGINALKNVFDYLNSM--NIPTMLDMKINDIG-----NTVKNYRKFIFEY 177 (352)
T ss_dssp HHHHHHHHHHGG-GCSEEEEEGGGTGGGTHHHHHHHHHHHHHHHHT--TCCEEEEEEECCCH-----HHHHHHHHHHHTT
T ss_pred HHHHHHHHHhcc-ccCEEEecHHHHHhCCHHHHHHHHHHHHHHHHC--CCeEEEEeecCchH-----HHHHHHHHHHHhh
Confidence 344455565543 35554 233322 233344455667765 68999998887654 4455565555432
Q ss_pred CCCeEEEEcCC-ChhHHHHHHHHHHhhc-CCC-EE-EEeCCCCcccccccccccCC--CCC--hHHHHHHHHHHH-HcCC
Q 025860 146 KRVVSVGINCT-PPRFISGLILIIKKVT-AKP-IL-IYPNSGEFYDADRKEWVQNT--GVS--DEDFVSYVSKWC-EVGA 216 (247)
Q Consensus 146 ~~~~avG~NC~-~p~~~~~~l~~l~~~~-~~p-l~-vyPNaG~~~d~~~~~~~~~~--~~~--~~~~~~~~~~~~-~~G~ 216 (247)
.++|+|-+++. +.+.|.++++...... +.+ ++ +.-|.+. ..+.... .-+ .+.+.+.+.+|. +.|.
T Consensus 178 lgaD~vTVh~~~G~~sl~~a~~~~a~~~gkgv~lLa~TSn~~~------~dlq~~~~~~g~~l~~~v~~~v~~la~~~G~ 251 (352)
T 2fds_A 178 LKSDSCTINVYMGTSMLKDICFDYEKNKYYSAYVLIKTTNKDS------FIFQNELSINDKQAYIVMAEETQKMATDLKI 251 (352)
T ss_dssp SCCSEEEECCTTCSTTHHHHSEETTTTEECEEEEEEECSSGGG------HHHHTTCEETTEEHHHHHHHHHHHHHHHHTT
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHhhccCCceEEEEEeCCcCH------HHHHHhhccCCCcHHHHHHHHHHHHHHHhCC
Confidence 58999999997 6677777764332211 122 22 2244432 0111000 001 122456665664 4455
Q ss_pred e----EEeecCC-CChHHHHHHHHHh
Q 025860 217 S----LVGGCCR-TTPNTIKGIYRTL 237 (247)
Q Consensus 217 ~----iIGGCCG-t~P~hI~al~~~l 237 (247)
. -+|=-|| |.|+.++.|++..
T Consensus 252 d~~~~~~GvVvGaTs~~e~~~iR~~~ 277 (352)
T 2fds_A 252 DQNNEFIGFVVGSNAFEEMKIIRNKF 277 (352)
T ss_dssp GGGTCCEEEEECTTCHHHHHHHHHHS
T ss_pred CccCCcceEEEcCCCHHHHHHHHHhC
Confidence 3 3566566 5789999998765
No 314
>3tjx_A Dihydroorotate dehydrogenase; PYRD, dhodh, lmdhodh, oxidored mutation H174A; HET: FMN; 1.64A {Leishmania major} PDB: 3gz3_A* 3gye_A* 3tro_A*
Probab=58.52 E-value=59 Score=28.36 Aligned_cols=57 Identities=18% Similarity=0.232 Sum_probs=35.1
Q ss_pred CCcEEEEEEEcCCCcccCCCcHHHHHH---HHHh--CCCCeEEEEcCCCh------------hHHHHHHHHHHhhcCCCE
Q 025860 114 KIPAWFSFNSKDGVNVVSGDSLLECAS---IAES--CKRVVSVGINCTPP------------RFISGLILIIKKVTAKPI 176 (247)
Q Consensus 114 ~~pv~is~~~~~~~~l~~G~~~~~~~~---~~~~--~~~~~avG~NC~~p------------~~~~~~l~~l~~~~~~pl 176 (247)
++|+.+++. |.++++.++ .+.+ ...+++|=+|.++| +.+..+++.+++..+.|+
T Consensus 126 ~~pvivsi~---------g~~~~~~~~~~~~~~~~~~~~ad~ielNiScPn~~g~~~l~~~~~~~~~i~~~v~~~~~~pv 196 (354)
T 3tjx_A 126 KKPLFLSMS---------GLSMRENVEMCKRLAAVATEKGVILELNLSCPNVPGKPQVAYDFDAMRQCLTAVSEVYPHSF 196 (354)
T ss_dssp TCCEEEEEC---------CSSHHHHHHHHHHHHHHHHHHCCEEEEECC---------CTTSHHHHHHHHHHHHHHCCSCE
T ss_pred CceEEEEEe---------cCChHHHHHHHHHHHHhhhcCCCEEEeeeCCCCCcchhhhccCHHHHHHHHHHHHHHhhccc
Confidence 689999983 545554332 2221 12567888888754 445666777777788887
Q ss_pred EEE
Q 025860 177 LIY 179 (247)
Q Consensus 177 ~vy 179 (247)
.+.
T Consensus 197 ~vK 199 (354)
T 3tjx_A 197 GVK 199 (354)
T ss_dssp EEE
T ss_pred ccc
Confidence 664
No 315
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=58.35 E-value=60 Score=28.03 Aligned_cols=109 Identities=11% Similarity=0.121 Sum_probs=63.7
Q ss_pred CHHHHHHHHHHHHHHHhcCCCCEEEEecCCCH--HHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHh
Q 025860 67 TVETLKDFHRRRVQVLVESAPDLIAFETIPNK--IEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAES 144 (247)
Q Consensus 67 s~~e~~~~~~~q~~~l~~~gvD~i~~ET~~~~--~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~ 144 (247)
+.+|+... ++.|+.+.+.|+|.|.|=-+..- .......++++..+ .+++ ||...-... .+..++++.+.+
T Consensus 106 s~~E~~~M-~~dI~~~~~~GAdGvVfG~L~~dg~iD~~~~~~Li~~a~-~l~v----TFHRAFD~~--~d~~~Ale~Li~ 177 (287)
T 3iwp_A 106 SDREIEVM-KADIRLAKLYGADGLVFGALTEDGHIDKELCMSLMAICR-PLPV----TFHRAFDMV--HDPMAALETLLT 177 (287)
T ss_dssp CHHHHHHH-HHHHHHHHHTTCSEEEECCBCTTSCBCHHHHHHHHHHHT-TSCE----EECGGGGGC--SCHHHHHHHHHH
T ss_pred CHHHHHHH-HHHHHHHHHcCCCEEEEeeeCCCCCcCHHHHHHHHHHcC-CCcE----EEECchhcc--CCHHHHHHHHHH
Confidence 55666553 34788899999999999853221 22334444444443 3443 443321111 235678888877
Q ss_pred CCCCeEEEEcCCCh--hHHHHHHHHHHhhcCCCEEEEeCCCC
Q 025860 145 CKRVVSVGINCTPP--RFISGLILIIKKVTAKPILIYPNSGE 184 (247)
Q Consensus 145 ~~~~~avG~NC~~p--~~~~~~l~~l~~~~~~pl~vyPNaG~ 184 (247)
. +++-|.-.-..+ ..-.+.|+++.+..+.++.+.|-+|.
T Consensus 178 l-GvdrILTSG~~~~a~~Gl~~Lk~Lv~~a~~rI~ImaGGGV 218 (287)
T 3iwp_A 178 L-GFERVLTSGCDSSALEGLPLIKRLIEQAKGRIVVMPGGGI 218 (287)
T ss_dssp H-TCSEEEECTTSSSTTTTHHHHHHHHHHHTTSSEEEECTTC
T ss_pred c-CCCEEECCCCCCChHHhHHHHHHHHHHhCCCCEEEECCCc
Confidence 3 788887755422 22345566665555556778888885
No 316
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=58.20 E-value=80 Score=27.96 Aligned_cols=107 Identities=9% Similarity=0.060 Sum_probs=62.4
Q ss_pred CCHHH---HHHHHHHHHHHHhcCCCCEEEEecCC---------------------CH-HHHHH---HHHHHHhh-CCCCc
Q 025860 66 ITVET---LKDFHRRRVQVLVESAPDLIAFETIP---------------------NK-IEAQA---YAELLEEE-NIKIP 116 (247)
Q Consensus 66 ~s~~e---~~~~~~~q~~~l~~~gvD~i~~ET~~---------------------~~-~E~~a---a~~~~~~~-~~~~p 116 (247)
+|.+| +.+.|.+-++...++|.|.|=+=--. ++ ..++. +++++++. +.+ |
T Consensus 143 mt~~eI~~ii~~f~~AA~~a~~aGfDgVEih~a~GYLl~QFLSp~~N~RtD~yGGslenR~rf~~eiv~aVr~~vg~~-~ 221 (362)
T 4ab4_A 143 LETEEINDIVEAYRSGAENAKAAGFDGVEIHGANGYLLDQFLQSSTNQRTDRYGGSLENRARLLLEVTDAAIEVWGAQ-R 221 (362)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGG-G
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCcCccHHHhhcCCccccccCCCCCchhhHHHHHHHHHHHHHHhcCCC-c
Confidence 55544 55678888888888999999554321 11 23444 44455553 334 8
Q ss_pred EEEEEEEcCCC-cccCCCcHHH---HHHHHHhCCCCeEEEEcCC--ChhHHHHHHHHHHhhcCCCEEE
Q 025860 117 AWFSFNSKDGV-NVVSGDSLLE---CASIAESCKRVVSVGINCT--PPRFISGLILIIKKVTAKPILI 178 (247)
Q Consensus 117 v~is~~~~~~~-~l~~G~~~~~---~~~~~~~~~~~~avG~NC~--~p~~~~~~l~~l~~~~~~pl~v 178 (247)
|.+-++..+.. ...++.+.++ +++.+.+ .+++.|=+-.. ++ ++++.+++..+.|+++
T Consensus 222 v~vRls~~~~~~g~~~~~~~~~~~~la~~l~~-~Gvd~i~v~~~~~~~----~~~~~ik~~~~iPvi~ 284 (362)
T 4ab4_A 222 VGVHLAPRADAHDMGDADRAETFTYVARELGK-RGIAFICSREREADD----SIGPLIKEAFGGPYIV 284 (362)
T ss_dssp EEEEECTTCCSSSCCCTTHHHHHHHHHHHHHH-TTCSEEEEECCCCTT----CCHHHHHHHHCSCEEE
T ss_pred eEEEeeccccccccCCCCcHHHHHHHHHHHHH-hCCCEEEECCCCCCH----HHHHHHHHHCCCCEEE
Confidence 88888754321 1112333444 4555555 58888776654 23 3566677777888654
No 317
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=58.09 E-value=44 Score=27.22 Aligned_cols=80 Identities=18% Similarity=0.147 Sum_probs=43.0
Q ss_pred HHHHHHhcCCCCEEEEecCC----CHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEE
Q 025860 77 RRVQVLVESAPDLIAFETIP----NKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVG 152 (247)
Q Consensus 77 ~q~~~l~~~gvD~i~~ET~~----~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG 152 (247)
+.++.+.++|+|.|.+=-.. ........++.+++.. ++|+++.--+ . +..++-+.+ . .++++|.
T Consensus 35 ~~a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~~~~-~iPvi~~Ggi------~---~~~~~~~~~-~-~Gad~V~ 102 (252)
T 1ka9_F 35 EAARAYDEAGADELVFLDISATHEERAILLDVVARVAERV-FIPLTVGGGV------R---SLEDARKLL-L-SGADKVS 102 (252)
T ss_dssp HHHHHHHHHTCSCEEEEECCSSTTCHHHHHHHHHHHHTTC-CSCEEEESSC------C---SHHHHHHHH-H-HTCSEEE
T ss_pred HHHHHHHHcCCCEEEEEcCCccccCccccHHHHHHHHHhC-CCCEEEECCc------C---CHHHHHHHH-H-cCCCEEE
Confidence 35666777899987652111 1112222333444432 6899974322 1 234444433 3 3689888
Q ss_pred EcCC---ChhHHHHHHHHH
Q 025860 153 INCT---PPRFISGLILII 168 (247)
Q Consensus 153 ~NC~---~p~~~~~~l~~l 168 (247)
+... .|+.+.++++.+
T Consensus 103 lg~~~l~~p~~~~~~~~~~ 121 (252)
T 1ka9_F 103 VNSAAVRRPELIRELADHF 121 (252)
T ss_dssp ECHHHHHCTHHHHHHHHHH
T ss_pred EChHHHhCcHHHHHHHHHc
Confidence 8774 466566665554
No 318
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=58.08 E-value=72 Score=27.80 Aligned_cols=65 Identities=15% Similarity=0.147 Sum_probs=43.9
Q ss_pred HHHHHHHHHHhcCCCCEEEEe-cC--CCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHH
Q 025860 73 DFHRRRVQVLVESAPDLIAFE-TI--PNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAE 143 (247)
Q Consensus 73 ~~~~~q~~~l~~~gvD~i~~E-T~--~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~ 143 (247)
+++.+.++.+.+.|+|.|.+= |+ ..+.++...++.+++.-++ +-++|.+.++ .|..++.++..+.
T Consensus 169 ~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~~p~--~~i~~H~Hnd----~GlA~AN~laAv~ 236 (337)
T 3ble_A 169 DYVKSLVEHLSKEHIERIFLPDTLGVLSPEETFQGVDSLIQKYPD--IHFEFHGHND----YDLSVANSLQAIR 236 (337)
T ss_dssp HHHHHHHHHHHTSCCSEEEEECTTCCCCHHHHHHHHHHHHHHCTT--SCEEEECBCT----TSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEecCCCCcCHHHHHHHHHHHHHhcCC--CeEEEEecCC----cchHHHHHHHHHH
Confidence 456668888889999998554 54 4577888888888875323 4467777654 4666666666554
No 319
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=57.91 E-value=42 Score=28.47 Aligned_cols=100 Identities=16% Similarity=0.118 Sum_probs=53.5
Q ss_pred cCCCcHHHHHHHHHhCCCCeEEEEcCCChhHHHHHHHHHHhh-cCCCEEE--EeCC----CC--ccccc---ccccccCC
Q 025860 130 VSGDSLLECASIAESCKRVVSVGINCTPPRFISGLILIIKKV-TAKPILI--YPNS----GE--FYDAD---RKEWVQNT 197 (247)
Q Consensus 130 ~~G~~~~~~~~~~~~~~~~~avG~NC~~p~~~~~~l~~l~~~-~~~pl~v--yPNa----G~--~~d~~---~~~~~~~~ 197 (247)
.||..+..+.....+ .| ...+.+..+++.+++. .+.|+++ |-|. |. ..+.- .-...--.
T Consensus 60 aDGp~Iq~a~~~AL~-~G--------~~~~~~~~~v~~ir~~~~~~Pivlm~Y~npv~~~g~e~f~~~~~~aGvdgvii~ 130 (267)
T 3vnd_A 60 ADGPVIQGANLRSLA-AG--------TTSSDCFDIITKVRAQHPDMPIGLLLYANLVFANGIDEFYTKAQAAGVDSVLIA 130 (267)
T ss_dssp TCCHHHHHHHHHHHH-TT--------CCHHHHHHHHHHHHHHCTTCCEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEET
T ss_pred CCCHHHHHHHHHHHH-cC--------CCHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEeC
Confidence 477777776665544 23 3466677777777766 6777544 5564 21 00000 00000001
Q ss_pred CCChHHHHHHHHHHHHcCCeEEeecCCCC-hHHHHHHHHHhh
Q 025860 198 GVSDEDFVSYVSKWCEVGASLVGGCCRTT-PNTIKGIYRTLS 238 (247)
Q Consensus 198 ~~~~~~~~~~~~~~~~~G~~iIGGCCGt~-P~hI~al~~~l~ 238 (247)
++.+++..++.....+.|...|==+--+| ++.|+.+.+...
T Consensus 131 Dlp~ee~~~~~~~~~~~gl~~i~liaP~t~~eri~~i~~~~~ 172 (267)
T 3vnd_A 131 DVPVEESAPFSKAAKAHGIAPIFIAPPNADADTLKMVSEQGE 172 (267)
T ss_dssp TSCGGGCHHHHHHHHHTTCEEECEECTTCCHHHHHHHHHHCC
T ss_pred CCCHhhHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHhCC
Confidence 24455555666666677877666666554 466776665543
No 320
>3txv_A Probable tagatose 6-phosphate kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.80A {Sinorhizobium meliloti}
Probab=57.10 E-value=54 Score=30.19 Aligned_cols=86 Identities=22% Similarity=0.341 Sum_probs=50.6
Q ss_pred cHHHHHHHHHhCCCCeEEEEcCCChhHHHHHHHHHHhhcCCCEEEEeCCCCc-ccccccccccCCCCChHHHHHHHHHHH
Q 025860 134 SLLECASIAESCKRVVSVGINCTPPRFISGLILIIKKVTAKPILIYPNSGEF-YDADRKEWVQNTGVSDEDFVSYVSKWC 212 (247)
Q Consensus 134 ~~~~~~~~~~~~~~~~avG~NC~~p~~~~~~l~~l~~~~~~pl~vyPNaG~~-~d~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (247)
++.+.++..++..+.-+..|||.+++.+..+|+..++ .+.|+++....+.+ +.+ .|. ..+|+.|..+++...
T Consensus 7 ~mkelL~~ak~g~~~gi~av~~~n~e~i~Ail~aAee-~~sPVIIe~t~~qv~~~g---GYt---G~~p~~f~~~V~~~A 79 (450)
T 3txv_A 7 HLIDIARWSERPGPRGIPSICSAHPLVIEAAMLRAHR-EKAPVLIEATCNQVNQDG---GYT---GMTPEDFTRFVGAIA 79 (450)
T ss_dssp --------------CCEEEECCCCHHHHHHHHHHHHH-SCSCEEEEEETTTSCTTC---TTT---TCCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhCCCcEEEEeCcCCHHHHHHHHHHHHH-hCCCEEEEcChhhHhhcC---CCC---CCCHHHHHHHHHHHH
Confidence 3455665554422456677888899998888887665 46898877665543 211 122 146889999998876
Q ss_pred H-cCCe----EEeecCCCC
Q 025860 213 E-VGAS----LVGGCCRTT 226 (247)
Q Consensus 213 ~-~G~~----iIGGCCGt~ 226 (247)
+ .|+. +++|-=|..
T Consensus 80 ~~~~vPv~pV~LhlDHg~~ 98 (450)
T 3txv_A 80 DRIEFPREKILLGGDHLGP 98 (450)
T ss_dssp HHTTCCGGGEEEEEEEESS
T ss_pred HHcCcCcccEEEECCCCCC
Confidence 4 6777 899887754
No 321
>2nq5_A 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; structural genomics, target 6426D, PSI; 1.90A {Streptococcus mutans} PDB: 3l7s_A 3l7r_A 3t0c_A
Probab=57.07 E-value=81 Score=30.87 Aligned_cols=128 Identities=13% Similarity=0.117 Sum_probs=71.7
Q ss_pred HHHHHHHHHHHHHHhcCCCCEEEEec-C-C-CH-HH-HHHHHHHHHhhC---CCCcEEEEEEEcCCCcccCCCcHHHHHH
Q 025860 69 ETLKDFHRRRVQVLVESAPDLIAFET-I-P-NK-IE-AQAYAELLEEEN---IKIPAWFSFNSKDGVNVVSGDSLLECAS 140 (247)
Q Consensus 69 ~e~~~~~~~q~~~l~~~gvD~i~~ET-~-~-~~-~E-~~aa~~~~~~~~---~~~pv~is~~~~~~~~l~~G~~~~~~~~ 140 (247)
+.+...|.++++.|.++|++.|-|.- . . ++ .+ ..++..+.+... .+.++++...|.+ + + ...
T Consensus 177 ~~L~~~y~~~l~~L~~~Ga~~VQiDEP~L~~dl~~~~~~~~~~ay~~l~~~~~~~~v~lhtyfG~---~--~-----~~~ 246 (755)
T 2nq5_A 177 KSLLPLYKQVFTELVKAGASYIQVDEPIFVTDEGKDYLQAAKAVYAYFAKEVPDAKFIFQTYFEG---L--I-----DSQ 246 (755)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEECGGGGSSGGGGGHHHHHHHHHHHHHHSTTCEEEEECCSSC---C--T-----THH
T ss_pred HHHHHHHHHHHHHHHhcCCCEEEEeCCcccCCCCHHHHHHHHHHHHHHHhcccCCcEEEEEeCCC---h--H-----HHH
Confidence 66778899999999999999985431 1 1 11 11 222222333321 0356666543422 1 1 444
Q ss_pred HHHhCCCCeEEEEcCC-Ch-hHHHHHHHHHHhhc--CCC--EEEEeCCCCcccccccccccCCCCChHHHHHHHHHHHHc
Q 025860 141 IAESCKRVVSVGINCT-PP-RFISGLILIIKKVT--AKP--ILIYPNSGEFYDADRKEWVQNTGVSDEDFVSYVSKWCEV 214 (247)
Q Consensus 141 ~~~~~~~~~avG~NC~-~p-~~~~~~l~~l~~~~--~~p--l~vyPNaG~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (247)
.+.+ .++++|++-+. .+ +.+ +.+.+.. ++- +++-+ + .+.|.. +++...+.+++..+.
T Consensus 247 ~l~~-l~vd~l~lD~v~~~~~~l----~~l~~~~~~~k~L~~GvVd-------g-rniw~~----d~e~v~~~l~~~~~~ 309 (755)
T 2nq5_A 247 VLSQ-LPVDAFGLDFVYGLEENL----EAIKTGAFKGKEIFAGVID-------G-RNIWSS----DFVKTSALLETIEEQ 309 (755)
T ss_dssp HHTT-SSCSEEEEESSSSHHHHH----HHHHTTTTTTSEEEEEEEC-------T-TSCBCC----CHHHHHHHHHHHHHT
T ss_pred HHHh-CCCCEEEEEecCCChhhH----HHHHHhcCCCCEEEEEeeC-------C-cccCCC----CHHHHHHHHHHHHhh
Confidence 5555 57999999997 45 333 3333211 222 33333 2 245643 577777777776654
Q ss_pred CCe--EEeecCC
Q 025860 215 GAS--LVGGCCR 224 (247)
Q Consensus 215 G~~--iIGGCCG 224 (247)
.. +|.=-||
T Consensus 310 -~~~l~vsPsCs 320 (755)
T 2nq5_A 310 -SAALTIQPSCS 320 (755)
T ss_dssp -SSEEEEEESSC
T ss_pred -cCCEEEcCCCC
Confidence 44 7888898
No 322
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=56.49 E-value=92 Score=26.40 Aligned_cols=105 Identities=7% Similarity=-0.047 Sum_probs=64.0
Q ss_pred CHHHHHHHHHHHHHHHhcCCCCEEEEecCCC-----HHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHH
Q 025860 67 TVETLKDFHRRRVQVLVESAPDLIAFETIPN-----KIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASI 141 (247)
Q Consensus 67 s~~e~~~~~~~q~~~l~~~gvD~i~~ET~~~-----~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~ 141 (247)
+.+|+... ++-++.+.+.|+|-|+|=.+.. ..-++..+++++ ++|+ ||..--... ....++++.
T Consensus 68 s~~E~~~M-~~Di~~~~~~GadGvV~G~Lt~dg~iD~~~~~~Li~~a~----~~~v----TFHRAfD~~--~d~~~ale~ 136 (256)
T 1twd_A 68 SDGEFAAI-LEDVRTVRELGFPGLVTGVLDVDGNVDMPRMEKIMAAAG----PLAV----TFHRAFDMC--ANPLYTLNN 136 (256)
T ss_dssp CHHHHHHH-HHHHHHHHHTTCSEEEECCBCTTSSBCHHHHHHHHHHHT----TSEE----EECGGGGGC--SCHHHHHHH
T ss_pred CHHHHHHH-HHHHHHHHHcCCCEEEEeeECCCCCcCHHHHHHHHHHhC----CCcE----EEECchhcc--CCHHHHHHH
Confidence 55666664 4477788889999999987743 333333443333 4553 333221111 356778888
Q ss_pred HHhCCCCeEEEEcCCC--hhHHHHHHHHHHhhcCCCEEEEeCCCC
Q 025860 142 AESCKRVVSVGINCTP--PRFISGLILIIKKVTAKPILIYPNSGE 184 (247)
Q Consensus 142 ~~~~~~~~avG~NC~~--p~~~~~~l~~l~~~~~~pl~vyPNaG~ 184 (247)
+.+ .|++-|.-.-.. ...-.+.|+++.+..+ .+.+.|-+|.
T Consensus 137 L~~-lG~~rILTSG~~~~a~~g~~~L~~Lv~~a~-~i~Im~GgGv 179 (256)
T 1twd_A 137 LAE-LGIARVLTSGQKSDALQGLSKIMELIAHRD-APIIMAGAGV 179 (256)
T ss_dssp HHH-HTCCEEEECTTSSSTTTTHHHHHHHHTSSS-CCEEEEESSC
T ss_pred HHH-cCCCEEECCCCCCCHHHHHHHHHHHHHhhC-CcEEEecCCc
Confidence 877 478887754322 2344566777665555 7889998885
No 323
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=56.27 E-value=62 Score=25.99 Aligned_cols=94 Identities=14% Similarity=0.046 Sum_probs=56.9
Q ss_pred HHHHHhcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEEcCCC
Q 025860 78 RVQVLVESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGINCTP 157 (247)
Q Consensus 78 q~~~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~NC~~ 157 (247)
.++.+ +.|+|++=+-+.+++.....+++.+|+..++.|+++-+.+.+.+ ...++.+.+ .|++.|-+-+..
T Consensus 24 ~~~~~-~~~vd~ie~g~~~~~~~G~~~i~~lr~~~~~~~i~ld~~l~d~p--------~~~~~~~~~-aGad~i~vh~~~ 93 (218)
T 3jr2_A 24 VASNV-ASYVDVIEVGTILAFAEGMKAVSTLRHNHPNHILVCDMKTTDGG--------AILSRMAFE-AGADWITVSAAA 93 (218)
T ss_dssp HHHHH-GGGCSEEEECHHHHHHHTTHHHHHHHHHCTTSEEEEEEEECSCH--------HHHHHHHHH-HTCSEEEEETTS
T ss_pred HHHHh-cCCceEEEeCcHHHHhcCHHHHHHHHHhCCCCcEEEEEeecccH--------HHHHHHHHh-cCCCEEEEecCC
Confidence 34444 46899874344445556666777788763367888776654321 234455555 488998888874
Q ss_pred -hhHHHHHHHHHHhhcCCCEEE-EeCC
Q 025860 158 -PRFISGLILIIKKVTAKPILI-YPNS 182 (247)
Q Consensus 158 -p~~~~~~l~~l~~~~~~pl~v-yPNa 182 (247)
.+.+..+++.+++. +...++ .+|.
T Consensus 94 ~~~~~~~~~~~~~~~-g~~~~~d~l~~ 119 (218)
T 3jr2_A 94 HIATIAACKKVADEL-NGEIQIEIYGN 119 (218)
T ss_dssp CHHHHHHHHHHHHHH-TCEEEEECCSS
T ss_pred CHHHHHHHHHHHHHh-CCccceeeeec
Confidence 45567777777664 444444 4443
No 324
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=56.27 E-value=48 Score=30.53 Aligned_cols=64 Identities=16% Similarity=0.131 Sum_probs=45.6
Q ss_pred HHHHHHHHHHhcCCCCEEEE-ecC--CCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHH
Q 025860 73 DFHRRRVQVLVESAPDLIAF-ETI--PNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAE 143 (247)
Q Consensus 73 ~~~~~q~~~l~~~gvD~i~~-ET~--~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~ 143 (247)
+++.+.++.+.+.|+|.|.+ -|. ..+.++..+++.+++.- ++ -+++.+.++ .|..++.++..+.
T Consensus 158 e~~~~~a~~l~~~Gad~I~l~DT~G~~~P~~v~~lv~~l~~~~-~~--~i~~H~Hnd----~GlAvAN~laAv~ 224 (464)
T 2nx9_A 158 QTWVDVAQQLAELGVDSIALKDMAGILTPYAAEELVSTLKKQV-DV--ELHLHCHST----AGLADMTLLKAIE 224 (464)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEETTSCCCHHHHHHHHHHHHHHC-CS--CEEEEECCT----TSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCEEEEcCCCCCcCHHHHHHHHHHHHHhc-CC--eEEEEECCC----CChHHHHHHHHHH
Confidence 45666888888999999865 454 46789999999988753 34 467777654 4666666666554
No 325
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=56.15 E-value=23 Score=30.69 Aligned_cols=57 Identities=11% Similarity=0.116 Sum_probs=34.7
Q ss_pred HhcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEEc
Q 025860 82 LVESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGIN 154 (247)
Q Consensus 82 l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~N 154 (247)
.+++|+|+|.+-++ ++.+++.+++.++. +.|+.+| .|-+++.+.+.. + .|++.|++-
T Consensus 224 A~~aGaD~I~ld~~-~~e~l~~~v~~~~~---~~~I~AS----------GGIt~~~i~~~a-~-~GvD~isvG 280 (296)
T 1qap_A 224 ALKAGADIIMLDNF-NTDQMREAVKRVNG---QARLEVS----------GNVTAETLREFA-E-TGVDFISVG 280 (296)
T ss_dssp HHHTTCSEEEESSC-CHHHHHHHHHTTCT---TCCEEEC----------CCSCHHHHHHHH-H-TTCSEEECS
T ss_pred HHHcCCCEEEECCC-CHHHHHHHHHHhCC---CCeEEEE----------CCCCHHHHHHHH-H-cCCCEEEEe
Confidence 34578888888884 46777766654331 3444432 356666666644 3 478888763
No 326
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=55.90 E-value=57 Score=28.15 Aligned_cols=72 Identities=10% Similarity=0.051 Sum_probs=42.5
Q ss_pred HHHHHHhcCCCCEEEEecC------------CCHHH----HHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHH
Q 025860 77 RRVQVLVESAPDLIAFETI------------PNKIE----AQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECAS 140 (247)
Q Consensus 77 ~q~~~l~~~gvD~i~~ET~------------~~~~E----~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~ 140 (247)
+|++.+.++|+|+|++|-= .++.+ +..+++++++.+++..+++. .+-+ .+.+++-.
T Consensus 174 eeA~amA~agpDiI~~h~glT~gglIG~~~avs~~~~~e~i~~i~~a~~~vnpdvivLc~-----gGpI---stpeDv~~ 245 (286)
T 2p10_A 174 EDAVAMAKAGADILVCHMGLTTGGAIGARSGKSMDDCVSLINECIEAARTIRDDIIILSH-----GGPI---ANPEDARF 245 (286)
T ss_dssp HHHHHHHHHTCSEEEEECSCC---------CCCHHHHHHHHHHHHHHHHHHCSCCEEEEE-----STTC---CSHHHHHH
T ss_pred HHHHHHHHcCCCEEEECCCCCCCCcccCCCcccHHHhHHHHHHHHHHHHHhCCCcEEEec-----CCCC---CCHHHHHH
Confidence 5778888899999999843 15655 33455666776544433321 1112 44556655
Q ss_pred HHHhCCCCeEEEEcCC
Q 025860 141 IAESCKRVVSVGINCT 156 (247)
Q Consensus 141 ~~~~~~~~~avG~NC~ 156 (247)
.++...++++++.-.+
T Consensus 246 ~l~~t~G~~G~~gASs 261 (286)
T 2p10_A 246 ILDSCQGCHGFYGASS 261 (286)
T ss_dssp HHHHCTTCCEEEESHH
T ss_pred HHhcCCCccEEEeehh
Confidence 5554446777766554
No 327
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=55.74 E-value=83 Score=27.83 Aligned_cols=106 Identities=8% Similarity=0.042 Sum_probs=63.2
Q ss_pred CHHHHHHHHHHHHHHHhcCCCCEEEEecCC---------------------CH-HHHH---HHHHHHHhh-CCCCcEEEE
Q 025860 67 TVETLKDFHRRRVQVLVESAPDLIAFETIP---------------------NK-IEAQ---AYAELLEEE-NIKIPAWFS 120 (247)
Q Consensus 67 s~~e~~~~~~~q~~~l~~~gvD~i~~ET~~---------------------~~-~E~~---aa~~~~~~~-~~~~pv~is 120 (247)
+.+++.+.|.+-++...++|.|.|=+=--. ++ ..++ .+++++++. +.+ ||.+-
T Consensus 155 eI~~ii~~f~~AA~~A~~aGfDgVEih~a~GYLl~QFLsp~~N~RtD~yGGslenR~rf~~evv~aVr~~vg~~-~v~vR 233 (361)
T 3gka_A 155 EIPGVVAAFRRGAENARAAGFDGVEVHGANGYLLDQFLQDSANRRTDAYGGSIENRARLLLEVVDAAIDVWSAA-RVGVH 233 (361)
T ss_dssp GHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHSHHHHHHHHHHHHHHCGG-GEEEE
T ss_pred HHHHHHHHHHHHHHHHHHcCCCEEEECCcCccHHHhccCcccccccCCCCCChhhcHHHHHHHHHHHHHHcCCC-eEEEe
Confidence 356677788888888899999999554321 11 1233 345555553 434 88888
Q ss_pred EEEcCCC-cccCCCcHHH---HHHHHHhCCCCeEEEEcCC--ChhHHHHHHHHHHhhcCCCEEE
Q 025860 121 FNSKDGV-NVVSGDSLLE---CASIAESCKRVVSVGINCT--PPRFISGLILIIKKVTAKPILI 178 (247)
Q Consensus 121 ~~~~~~~-~l~~G~~~~~---~~~~~~~~~~~~avG~NC~--~p~~~~~~l~~l~~~~~~pl~v 178 (247)
++..+.. -..++.+.++ +++.+.+ .+++.|=+-.. ++ ++++.+++..+.|+++
T Consensus 234 ls~~~~~~g~~~~~~~~~~~~la~~l~~-~Gvd~i~v~~~~~~~----~~~~~ik~~~~iPvi~ 292 (361)
T 3gka_A 234 LAPRGDAHTMGDSDPAATFGHVARELGR-RRIAFLFARESFGGD----AIGQQLKAAFGGPFIV 292 (361)
T ss_dssp ECTTCCSSSCCCSCHHHHHHHHHHHHHH-TTCSEEEEECCCSTT----CCHHHHHHHHCSCEEE
T ss_pred cccccccCCCCCCCcHHHHHHHHHHHHH-cCCCEEEECCCCCCH----HHHHHHHHHcCCCEEE
Confidence 7754321 1223344444 5555555 58888776654 23 4566677777888654
No 328
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=55.60 E-value=37 Score=31.33 Aligned_cols=64 Identities=9% Similarity=0.089 Sum_probs=43.6
Q ss_pred cHHHHHHHHHhCCCCeEEEEcCC--ChhHHHHHHHHHHhhc-CCCEEEEeCCCCcccccccccccCCCCChHHHHHHHHH
Q 025860 134 SLLECASIAESCKRVVSVGINCT--PPRFISGLILIIKKVT-AKPILIYPNSGEFYDADRKEWVQNTGVSDEDFVSYVSK 210 (247)
Q Consensus 134 ~~~~~~~~~~~~~~~~avG~NC~--~p~~~~~~l~~l~~~~-~~pl~vyPNaG~~~d~~~~~~~~~~~~~~~~~~~~~~~ 210 (247)
...+.++.+.+ .++++|-+|++ .+......++.+++.. +.|+++ |. . .++ +.++.
T Consensus 255 ~~~~~a~~~~~-aG~d~v~i~~~~G~~~~~~~~i~~i~~~~~~~pvi~----~~--------v-----~t~----~~a~~ 312 (514)
T 1jcn_A 255 DDKYRLDLLTQ-AGVDVIVLDSSQGNSVYQIAMVHYIKQKYPHLQVIG----GN--------V-----VTA----AQAKN 312 (514)
T ss_dssp THHHHHHHHHH-TTCSEEEECCSCCCSHHHHHHHHHHHHHCTTCEEEE----EE--------E-----CSH----HHHHH
T ss_pred hhHHHHHHHHH-cCCCEEEeeccCCcchhHHHHHHHHHHhCCCCceEe----cc--------c-----chH----HHHHH
Confidence 34566666666 58999998665 5666778888888876 677764 11 0 122 33566
Q ss_pred HHHcCCeEE
Q 025860 211 WCEVGASLV 219 (247)
Q Consensus 211 ~~~~G~~iI 219 (247)
+.+.|+..|
T Consensus 313 l~~aGad~I 321 (514)
T 1jcn_A 313 LIDAGVDGL 321 (514)
T ss_dssp HHHHTCSEE
T ss_pred HHHcCCCEE
Confidence 778899988
No 329
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=55.49 E-value=20 Score=25.76 Aligned_cols=114 Identities=12% Similarity=0.082 Sum_probs=56.0
Q ss_pred ecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCC-cccCCCcHH--HHHHHHHhCCCCeEEEEcCCChhHHHHHHHHHH
Q 025860 93 ETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGV-NVVSGDSLL--ECASIAESCKRVVSVGINCTPPRFISGLILIIK 169 (247)
Q Consensus 93 ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~-~l~~G~~~~--~~~~~~~~~~~~~avG~NC~~p~~~~~~l~~l~ 169 (247)
++..+..++..++..++.. ++|+++-|...-=+ ....-..+. +....+.. ++..+.+||...+.-..+.+.+.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~--~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~--~~~~~~vd~~~~~~~~~l~~~~~ 85 (133)
T 3fk8_A 10 EHADAWTQVKKALAAGKRT--HKPTLLVFGANWCTDCRALDKSLRNQKNTALIAK--HFEVVKIDVGNFDRNLELSQAYG 85 (133)
T ss_dssp TTCCHHHHHHHHHHHHHHH--TCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHH--HCEEEEEECTTTTSSHHHHHHTT
T ss_pred cccChHhHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcC--CEEEEEEeCCcccchHHHHHHhC
Confidence 4555667777777776665 58999999743211 000001223 34443432 57899999943222233434332
Q ss_pred hh---cCCC-EEEE-eCCCCcccccccccccCCCCChHHHHHHHHHH
Q 025860 170 KV---TAKP-ILIY-PNSGEFYDADRKEWVQNTGVSDEDFVSYVSKW 211 (247)
Q Consensus 170 ~~---~~~p-l~vy-PNaG~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 211 (247)
. ...| ++++ +|+-..+......+......+.+.+.++++++
T Consensus 86 -v~~~~~~Pt~~~~d~~G~~~~~~~g~~~~~~~~~~~~~l~~~l~~l 131 (133)
T 3fk8_A 86 -DPIQDGIPAVVVVNSDGKVRYTTKGGELANARKMSDQGIYDFFAKI 131 (133)
T ss_dssp -CGGGGCSSEEEEECTTSCEEEECCSCTTTTGGGSCHHHHHHHHHHH
T ss_pred -CccCCccceEEEECCCCCEEEEecCCcccccccCCHHHHHHHHHHh
Confidence 2 4678 4555 55433322111112111124566666665554
No 330
>2dep_A Xylanase B, thermostable celloxylanase; glycosidase, xylan degradation, family 10, structural genomics, NPPSFA; 1.80A {Clostridium stercorarium}
Probab=55.44 E-value=23 Score=31.26 Aligned_cols=50 Identities=14% Similarity=0.100 Sum_probs=36.9
Q ss_pred HHHHHHHHHHhcCC--CCEEEEec-----CCCHHHHHHHHHHHHhhCCCCcEEEE-EEEc
Q 025860 73 DFHRRRVQVLVESA--PDLIAFET-----IPNKIEAQAYAELLEEENIKIPAWFS-FNSK 124 (247)
Q Consensus 73 ~~~~~q~~~l~~~g--vD~i~~ET-----~~~~~E~~aa~~~~~~~~~~~pv~is-~~~~ 124 (247)
+.+..+++.|.+.| +|.|-+.. .+++.+++..++.+... ++||+|| +.+.
T Consensus 201 ~~~~~~v~~l~~~G~~idgiG~Q~H~~~~~p~~~~~~~~l~~~a~~--Glpi~iTEldv~ 258 (356)
T 2dep_A 201 DILYELVKNLLEKGVPIDGVGHQTHIDIYNPPVERIIESIKKFAGL--GLDNIITELDMS 258 (356)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEECCEEESSCSCHHHHHHHHHHHHTT--TCEEEEEEEEEE
T ss_pred HHHHHHHHHHHHCCCCccEEEeeeeecCCCCCHHHHHHHHHHHHhC--CCeEEEeeceec
Confidence 45666888787766 59887753 37788999988887766 5899998 4443
No 331
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=55.35 E-value=96 Score=27.39 Aligned_cols=148 Identities=9% Similarity=-0.047 Sum_probs=80.4
Q ss_pred CHHHHHHHHHHHHHHHhcCCCCEEEEecC-CCHHHHHHHHHHHHhh-CCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHh
Q 025860 67 TVETLKDFHRRRVQVLVESAPDLIAFETI-PNKIEAQAYAELLEEE-NIKIPAWFSFNSKDGVNVVSGDSLLECASIAES 144 (247)
Q Consensus 67 s~~e~~~~~~~q~~~l~~~gvD~i~~ET~-~~~~E~~aa~~~~~~~-~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~ 144 (247)
+.+++. ++++.+.+.|.|.|=+-.- .++++....++++|+. +.+.++.+.+ ..|-+++++++.+..
T Consensus 162 ~~e~~~----~~a~~~~~~Gf~~vKik~g~~~~~~~~e~v~avR~avg~d~~l~vDa--------n~~~~~~~a~~~~~~ 229 (393)
T 2og9_A 162 PIDQLM----VNASASIERGIGGIKLKVGQPDGALDIARVTAVRKHLGDAVPLMVDA--------NQQWDRPTAQRMCRI 229 (393)
T ss_dssp CHHHHH----HHHHHHHHTTCCCEEEECCCSCHHHHHHHHHHHHHHHCTTSCEEEEC--------TTCCCHHHHHHHHHH
T ss_pred CHHHHH----HHHHHHHHcCCCEEEEecCCCCHHHHHHHHHHHHHHcCCCCEEEEEC--------CCCCCHHHHHHHHHH
Confidence 455543 4666666788887755322 3677778888888875 5567776532 246677887776643
Q ss_pred --CCCCeEEEEcCCChhHHHHHHHHHHhhcCCCEEEEeCCCCcccccccccccCC-----CCC------hHHHHHHHHHH
Q 025860 145 --CKRVVSVGINCTPPRFISGLILIIKKVTAKPILIYPNSGEFYDADRKEWVQNT-----GVS------DEDFVSYVSKW 211 (247)
Q Consensus 145 --~~~~~avG~NC~~p~~~~~~l~~l~~~~~~pl~vyPNaG~~~d~~~~~~~~~~-----~~~------~~~~~~~~~~~ 211 (247)
..+++.|==-| .++. ...++.+++..+.||++==+...+.+.. .+.... ... ..+..+.+.-.
T Consensus 230 l~~~~i~~iE~P~-~~~~-~~~~~~l~~~~~iPIa~dE~~~~~~~~~--~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A 305 (393)
T 2og9_A 230 FEPFNLVWIEEPL-DAYD-HEGHAALALQFDTPIATGEMLTSAAEHG--DLIRHRAADYLMPDAPRVGGITPFLKIASLA 305 (393)
T ss_dssp HGGGCCSCEECCS-CTTC-HHHHHHHHHHCSSCEEECTTCCSHHHHH--HHHHTTCCSEECCCHHHHTSHHHHHHHHHHH
T ss_pred HHhhCCCEEECCC-Cccc-HHHHHHHHHhCCCCEEeCCCcCCHHHHH--HHHHCCCCCEEeeCccccCCHHHHHHHHHHH
Confidence 12444332222 2222 4456667777788976533222111110 111000 012 22344444555
Q ss_pred HHcCCeEEeecCCCChHHH
Q 025860 212 CEVGASLVGGCCRTTPNTI 230 (247)
Q Consensus 212 ~~~G~~iIGGCCGt~P~hI 230 (247)
.+.|+.+..+||+..--|+
T Consensus 306 ~~~gi~~~~h~~~~~~~~l 324 (393)
T 2og9_A 306 EHAGLMLAPHFAMELHVHL 324 (393)
T ss_dssp HHTTCEECCCSCHHHHHHH
T ss_pred HHcCCEEeccCccHHHHHH
Confidence 5679999988887543333
No 332
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=55.35 E-value=19 Score=30.45 Aligned_cols=96 Identities=10% Similarity=-0.034 Sum_probs=56.2
Q ss_pred HHHHhcCCCCEEEEecC--CC-----HHHHHHHHHHHHhhCCCCcEEEEEEEc---CCC-c--c-----cCCCcHH-HHH
Q 025860 79 VQVLVESAPDLIAFETI--PN-----KIEAQAYAELLEEENIKIPAWFSFNSK---DGV-N--V-----VSGDSLL-ECA 139 (247)
Q Consensus 79 ~~~l~~~gvD~i~~ET~--~~-----~~E~~aa~~~~~~~~~~~pv~is~~~~---~~~-~--l-----~~G~~~~-~~~ 139 (247)
++.++ +|+|-+++-|. .+ ++-++.++ ++++ +..++++++++ +++ . + .+|.++. +.+
T Consensus 90 ~~~~l-~Ga~~Viigs~a~~~~g~~~p~~~~~~~---~~~g-~~~ivv~iD~k~~~~~g~~V~~~gw~~~t~~~~~~e~a 164 (260)
T 2agk_A 90 CLEWL-KWASKVIVTSWLFTKEGHFQLKRLERLT---ELCG-KDRIVVDLSCRKTQDGRWIVAMNKWQTLTDLELNADTF 164 (260)
T ss_dssp HHHHT-TTCSCEEECGGGBCTTCCBCHHHHHHHH---HHHC-GGGEEEEEEEEEEETTEEEEEETTTTEEEEEEESHHHH
T ss_pred HHHHh-cCCCEEEECcHHHhhcCCCCHHHHHHHH---HHhC-cCcEEEEEEeeecCCCceEEEEcCCccccCccHHHHHH
Confidence 44466 89999998875 44 54444444 4443 24677788776 311 1 1 1233444 788
Q ss_pred HHHHhCCCCeEEEEcCCChhH-----HHHHHHHHHhhc----CCCEEEEeCCC
Q 025860 140 SIAESCKRVVSVGINCTPPRF-----ISGLILIIKKVT----AKPILIYPNSG 183 (247)
Q Consensus 140 ~~~~~~~~~~avG~NC~~p~~-----~~~~l~~l~~~~----~~pl~vyPNaG 183 (247)
+.+.+ . +..|-++....+. -..+++.+.+.. +.|++ .|+|
T Consensus 165 ~~~~~-~-a~~il~t~i~~dG~~~G~d~eli~~l~~~~~~~~~iPVI--asGG 213 (260)
T 2agk_A 165 RELRK-Y-TNEFLIHAADVEGLCGGIDELLVSKLFEWTKDYDDLKIV--YAGG 213 (260)
T ss_dssp HHHTT-T-CSEEEEEC-------CCCCHHHHHHHHHHHTTCSSCEEE--EESC
T ss_pred HHHHH-h-cCEEEEEeeccccCcCCCCHHHHHHHHHhhcccCCceEE--EeCC
Confidence 87776 5 7888887743221 156778888777 78864 4444
No 333
>3cpg_A Uncharacterized protein; unknown protein, TIM barrel, monomer, structural genomics, PSI-2, protein structure initiative; 1.71A {Bifidobacterium adolescentis ATCC15703}
Probab=55.16 E-value=27 Score=29.60 Aligned_cols=64 Identities=13% Similarity=0.094 Sum_probs=42.8
Q ss_pred EecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcH---HHHHHHHHhCCCCeEEEEcCC
Q 025860 92 FETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSL---LECASIAESCKRVVSVGINCT 156 (247)
Q Consensus 92 ~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~---~~~~~~~~~~~~~~avG~NC~ 156 (247)
.-|+.++++++.+-+.+++.+...+|++-+....+ ..+.|.+. .++++.+....++...|+-|-
T Consensus 138 ~~~Vds~~~l~~L~~~a~~~~~~~~V~lkVdtGme-~~R~G~~~ee~~~l~~~i~~~~~l~l~Gl~th 204 (282)
T 3cpg_A 138 IESVDSIDLAEKISRRAVARGITVGVLLEVNESGE-ESKSGCDPAHAIRIAQKIGTLDGIELQGLMTI 204 (282)
T ss_dssp EEEECCHHHHHHHHHHHHHHTCCEEEEEEBCCSSC-TTSSSBCGGGHHHHHHHHHTCTTEEEEEEECC
T ss_pred EEEeCCHHHHHHHHHHHHhcCCCceEEEEEECCCC-CCCCCcCHHHHHHHHHHHHhCCCceEEeEEEE
Confidence 46888999999888777766545677777764321 13456554 445555555567888999984
No 334
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=55.06 E-value=1.2e+02 Score=27.43 Aligned_cols=67 Identities=12% Similarity=0.033 Sum_probs=41.1
Q ss_pred HHHHHHHhcCCCCEEEEecC-CCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEEc
Q 025860 76 RRRVQVLVESAPDLIAFETI-PNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGIN 154 (247)
Q Consensus 76 ~~q~~~l~~~gvD~i~~ET~-~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~N 154 (247)
.++++.+.++|+|.|++.+. .+.......++.+++..+++|++... . .+.+.+.. +.+ .++++|-+.
T Consensus 235 ~~~a~~l~~~G~d~ivi~~a~g~~~~~~~~i~~l~~~~p~~pvi~G~-------v---~t~~~a~~-~~~-~Gad~I~vg 302 (491)
T 1zfj_A 235 FERAEALFEAGADAIVIDTAHGHSAGVLRKIAEIRAHFPNRTLIAGN-------I---ATAEGARA-LYD-AGVDVVKVG 302 (491)
T ss_dssp HHHHHHHHHHTCSEEEECCSCTTCHHHHHHHHHHHHHCSSSCEEEEE-------E---CSHHHHHH-HHH-TTCSEEEEC
T ss_pred HHHHHHHHHcCCCeEEEeeecCcchhHHHHHHHHHHHCCCCcEeCCC-------c---cCHHHHHH-HHH-cCCCEEEEC
Confidence 36888899999999999873 23344444555556543368887222 1 12344443 444 578888665
No 335
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=55.04 E-value=87 Score=25.68 Aligned_cols=92 Identities=11% Similarity=0.036 Sum_probs=55.5
Q ss_pred HHHHHHHhcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcC-CC-cccCCCcHHHHHHHHHhCCCCeEEEE
Q 025860 76 RRRVQVLVESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKD-GV-NVVSGDSLLECASIAESCKRVVSVGI 153 (247)
Q Consensus 76 ~~q~~~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~-~~-~l~~G~~~~~~~~~~~~~~~~~avG~ 153 (247)
.+++++..++|+..|-..+ ++++ +.+|+.. ++|++--. -++ .+ ...-+.+++++-+ +.. .|++.|-+
T Consensus 39 ~~~A~a~~~~Ga~~i~~~~---~~~i----~~ir~~v-~~Pvig~~-k~~~~~~~~~I~~~~~~i~~-~~~-aGad~I~l 107 (229)
T 3q58_A 39 AAMAQAAASAGAVAVRIEG---IENL----RTVRPHL-SVPIIGII-KRDLTGSPVRITPYLQDVDA-LAQ-AGADIIAF 107 (229)
T ss_dssp HHHHHHHHHTTCSEEEEES---HHHH----HHHGGGC-CSCEEEEC-BCCCSSCCCCBSCSHHHHHH-HHH-HTCSEEEE
T ss_pred HHHHHHHHHCCCcEEEECC---HHHH----HHHHHhc-CCCEEEEE-eecCCCCceEeCccHHHHHH-HHH-cCCCEEEE
Confidence 3477788889999998754 4443 3455543 78986331 111 11 0111234555544 444 48999999
Q ss_pred cCC---ChhHHHHHHHHHHhhcCCCEEEE
Q 025860 154 NCT---PPRFISGLILIIKKVTAKPILIY 179 (247)
Q Consensus 154 NC~---~p~~~~~~l~~l~~~~~~pl~vy 179 (247)
+++ .|+.+..+++.+++. +.++++-
T Consensus 108 ~~~~~~~p~~l~~~i~~~~~~-g~~v~~~ 135 (229)
T 3q58_A 108 DASFRSRPVDIDSLLTRIRLH-GLLAMAD 135 (229)
T ss_dssp ECCSSCCSSCHHHHHHHHHHT-TCEEEEE
T ss_pred CccccCChHHHHHHHHHHHHC-CCEEEEe
Confidence 997 477888888888764 5555543
No 336
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=54.91 E-value=1e+02 Score=26.44 Aligned_cols=94 Identities=7% Similarity=-0.081 Sum_probs=60.1
Q ss_pred HHHHHhcCCCCEEEEecCC-------------CHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHh
Q 025860 78 RVQVLVESAPDLIAFETIP-------------NKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAES 144 (247)
Q Consensus 78 q~~~l~~~gvD~i~~ET~~-------------~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~ 144 (247)
-++.|.++|++.+-+|-.. +.+|+..-++++++...+.++.|.--.+. . ...++++++....
T Consensus 102 ~v~~l~~aGa~gv~iED~~~pKrcgh~~gkl~~~~e~~~~I~aa~~a~~~~~~~i~aRtda---a--~~gl~~ai~Ra~a 176 (287)
T 3b8i_A 102 TVVELERAGIAALTIEDTLLPAQFGRKSTDLICVEEGVGKIRAALEARVDPALTIIARTNA---E--LIDVDAVIQRTLA 176 (287)
T ss_dssp HHHHHHHHTCSEEEEECBCCSCCTTTCTTCBCCHHHHHHHHHHHHHHCCSTTSEEEEEEET---T--TSCHHHHHHHHHH
T ss_pred HHHHHHHhCCeEEEEcCCCCccccCCCCCCccCHHHHHHHHHHHHHcCCCCCcEEEEechh---h--hcCHHHHHHHHHH
Confidence 4555667999999999764 34577777777776643344555444332 1 2346777665532
Q ss_pred --CCCCeEEEEcCCC-hhHHHHHHHHHHhhcCCCEEEEe
Q 025860 145 --CKRVVSVGINCTP-PRFISGLILIIKKVTAKPILIYP 180 (247)
Q Consensus 145 --~~~~~avG~NC~~-p~~~~~~l~~l~~~~~~pl~vyP 180 (247)
..|+++|=+-|.. ++ .++.+.+..+.|+++-+
T Consensus 177 y~eAGAd~i~~e~~~~~~----~~~~i~~~~~~P~ii~~ 211 (287)
T 3b8i_A 177 YQEAGADGICLVGVRDFA----HLEAIAEHLHIPLMLVT 211 (287)
T ss_dssp HHHTTCSEEEEECCCSHH----HHHHHHTTCCSCEEEEC
T ss_pred HHHcCCCEEEecCCCCHH----HHHHHHHhCCCCEEEeC
Confidence 2589999999973 44 44555555679988544
No 337
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=54.81 E-value=1.1e+02 Score=26.63 Aligned_cols=120 Identities=12% Similarity=0.159 Sum_probs=61.1
Q ss_pred CCeEEEEecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCEEEEecC---CCH------HHHHHHHHH
Q 025860 37 RPILVAASVGSYGAYLADGSEYSGNYGDAITVETLKDFHRRRVQVLVESAPDLIAFETI---PNK------IEAQAYAEL 107 (247)
Q Consensus 37 ~~~~VaGsiGP~g~~l~~g~eY~g~y~~~~s~~e~~~~~~~q~~~l~~~gvD~i~~ET~---~~~------~E~~aa~~~ 107 (247)
.+.+|-|-|-=+-.++.||..| .+.+.+.+ +++.+++.|+|+|=+--- |.. +|++-++.+
T Consensus 8 ~~~~iMGIlNvTPDSFsdgg~~-------~~~~~a~~----~a~~~v~~GAdIIDIGgeSTrPGa~~v~~~eE~~Rv~pv 76 (314)
T 2vef_A 8 AKTVICGIINVTPDSFSDGGQF-------FALEQALQ----QARKLIAEGASMLDIGGESTRPGSSYVEIEEEIQRVVPV 76 (314)
T ss_dssp CCCEEEEEEECCC----------------CHHHHHHH----HHHHHHHTTCSEEEEECCC-----CHHHHHHHHHHHHHH
T ss_pred CCceEEEEEeCCCCCCCCCCCC-------CCHHHHHH----HHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHH
Confidence 4568888877777777776543 24455544 677788899999966543 332 677766555
Q ss_pred HHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEE-EEcCC-ChhHHHHHHHHHHhhcCCCEEEEeCC
Q 025860 108 LEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSV-GINCT-PPRFISGLILIIKKVTAKPILIYPNS 182 (247)
Q Consensus 108 ~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~av-G~NC~-~p~~~~~~l~~l~~~~~~pl~vyPNa 182 (247)
++..-....+.+|+.... .++++...+ .|++.| -++-. ..+.|.+++.. .+.|+++.-+-
T Consensus 77 I~~l~~~~~vpiSIDT~~----------~~Va~aAl~-aGa~iINDVsg~~~d~~m~~v~a~----~~~~vvlmh~~ 138 (314)
T 2vef_A 77 IKAIRKESDVLISIDTWK----------SQVAEAALA-AGADLVNDITGLMGDEKMPHVVAE----ARAQVVIMFNP 138 (314)
T ss_dssp HHHHHHHCCCEEEEECSC----------HHHHHHHHH-TTCCEEEETTTTCSCTTHHHHHHH----HTCEEEEECCH
T ss_pred HHHHHhhCCceEEEeCCC----------HHHHHHHHH-cCCCEEEECCCCCCChHHHHHHHH----cCCCEEEEecC
Confidence 433210124556774321 334444444 256544 23332 12355555543 36898888653
No 338
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=54.71 E-value=27 Score=28.73 Aligned_cols=48 Identities=13% Similarity=0.147 Sum_probs=31.0
Q ss_pred HHHHHHhcCCCCEEEEe-----cCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcC
Q 025860 77 RRVQVLVESAPDLIAFE-----TIPNKIEAQAYAELLEEENIKIPAWFSFNSKD 125 (247)
Q Consensus 77 ~q~~~l~~~gvD~i~~E-----T~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~ 125 (247)
+.++.+.++|+|+|=+- .+|++......++.+++.. ++|+-+-|-+.+
T Consensus 21 ~~i~~~~~~Gad~ihldi~DG~fvp~~~~g~~~v~~lr~~~-~~~~~vhlmv~d 73 (230)
T 1tqj_A 21 EEIKAVDEAGADWIHVDVMDGRFVPNITIGPLIVDAIRPLT-KKTLDVHLMIVE 73 (230)
T ss_dssp HHHHHHHHTTCSEEEEEEEBSSSSSCBCBCHHHHHHHGGGC-CSEEEEEEESSS
T ss_pred HHHHHHHHcCCCEEEEEEEecCCCcchhhhHHHHHHHHhhc-CCcEEEEEEccC
Confidence 47777888999987333 2345544446666777754 578877776543
No 339
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=54.49 E-value=1e+02 Score=26.61 Aligned_cols=36 Identities=14% Similarity=0.034 Sum_probs=25.6
Q ss_pred CCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEEcCC
Q 025860 114 KIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGINCT 156 (247)
Q Consensus 114 ~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~NC~ 156 (247)
+.|||..+.-.+ .|-.....++.+.+ .|+.++ +|-.
T Consensus 94 ~iPV~Agv~~~D-----P~~~~g~~Le~lk~-~Gf~Gv-~N~p 129 (286)
T 2p10_A 94 HTPVLAGVNGTD-----PFMVMSTFLRELKE-IGFAGV-QNFP 129 (286)
T ss_dssp SSCEEEEECTTC-----TTCCHHHHHHHHHH-HTCCEE-EECS
T ss_pred CCCEEEEECCcC-----CCcCHHHHHHHHHH-hCCceE-EECC
Confidence 789999953222 34455666677776 589999 9997
No 340
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=54.41 E-value=37 Score=31.34 Aligned_cols=63 Identities=17% Similarity=0.140 Sum_probs=35.0
Q ss_pred HHHHHhcCCCCEEEEe----c-----------CCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCC-cHHHHHHH
Q 025860 78 RVQVLVESAPDLIAFE----T-----------IPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGD-SLLECASI 141 (247)
Q Consensus 78 q~~~l~~~gvD~i~~E----T-----------~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~-~~~~~~~~ 141 (247)
.++.+.++|+|+|.+- + .|.+.-+..+.+++++. ++|++.+- |- +..++++.
T Consensus 283 ~a~~l~~aGaD~I~vg~g~Gs~~~t~~~~g~g~p~~~~l~~v~~~~~~~--~iPVIa~G----------GI~~~~di~ka 350 (490)
T 4avf_A 283 AAKALAEAGADAVKVGIGPGSICTTRIVAGVGVPQISAIANVAAALEGT--GVPLIADG----------GIRFSGDLAKA 350 (490)
T ss_dssp HHHHHHHTTCSEEEECSSCSTTCHHHHHTCBCCCHHHHHHHHHHHHTTT--TCCEEEES----------CCCSHHHHHHH
T ss_pred HHHHHHHcCCCEEEECCCCCcCCCccccCCCCccHHHHHHHHHHHhccC--CCcEEEeC----------CCCCHHHHHHH
Confidence 4566777888888762 1 23333344444444443 57877542 32 45666665
Q ss_pred HHhCCCCeEEEEc
Q 025860 142 AESCKRVVSVGIN 154 (247)
Q Consensus 142 ~~~~~~~~avG~N 154 (247)
+.. |+++|.+-
T Consensus 351 l~~--GAd~V~vG 361 (490)
T 4avf_A 351 MVA--GAYCVMMG 361 (490)
T ss_dssp HHH--TCSEEEEC
T ss_pred HHc--CCCeeeec
Confidence 543 56776664
No 341
>2yv4_A Hypothetical protein PH0435; alpha and beta proteins (A+B), SUA5 domain, structural genom NPPSFA; 2.00A {Pyrococcus horikoshii}
Probab=54.39 E-value=18 Score=26.22 Aligned_cols=45 Identities=13% Similarity=0.143 Sum_probs=32.6
Q ss_pred CHHHHHHHHHHHHHHHhcCCCCEEEEecCCCHHHHHHHHHHHHhh
Q 025860 67 TVETLKDFHRRRVQVLVESAPDLIAFETIPNKIEAQAYAELLEEE 111 (247)
Q Consensus 67 s~~e~~~~~~~q~~~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~ 111 (247)
+.++........++.|=+.|+|.|++|.+|.-..-.++..-+++.
T Consensus 53 ~~~~~A~~Lf~~LR~~D~~~~~~I~~e~~p~~g~g~Ai~nRL~kA 97 (105)
T 2yv4_A 53 SVEEVAKNLFKALRYMDKAGVDVVIAEGVEERGLGLAVMNRLRKA 97 (105)
T ss_dssp SHHHHHHHHHHHHHHHHHTTCSEEEEEEESGGGHHHHHHHHC---
T ss_pred CHHHHHHHHHHHHHHHHhCCCCEEEEeCCCCcChHHHHHHHHHHh
Confidence 556665555557777777899999999999987778887777765
No 342
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=54.12 E-value=35 Score=31.57 Aligned_cols=65 Identities=14% Similarity=0.119 Sum_probs=36.4
Q ss_pred HHHHHHhcCCCCEEEEe-----c----------CCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCC-CcHHHHHH
Q 025860 77 RRVQVLVESAPDLIAFE-----T----------IPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSG-DSLLECAS 140 (247)
Q Consensus 77 ~q~~~l~~~gvD~i~~E-----T----------~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G-~~~~~~~~ 140 (247)
+.++.+.++|+|+|.+. . .|.+.-+..+.+++++. ++|++.+- | .+..++++
T Consensus 284 e~a~~l~~aGaD~I~Vg~g~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~--~iPVIa~G----------GI~~~~di~k 351 (496)
T 4fxs_A 284 EGARALIEAGVSAVKVGIGPGSICTTRIVTGVGVPQITAIADAAGVANEY--GIPVIADG----------GIRFSGDISK 351 (496)
T ss_dssp HHHHHHHHHTCSEEEECSSCCTTBCHHHHHCCCCCHHHHHHHHHHHHGGG--TCCEEEES----------CCCSHHHHHH
T ss_pred HHHHHHHHhCCCEEEECCCCCcCcccccccCCCccHHHHHHHHHHHhccC--CCeEEEeC----------CCCCHHHHHH
Confidence 34566677888888764 1 33344444445555544 47877543 2 24455665
Q ss_pred HHHhCCCCeEEEEcC
Q 025860 141 IAESCKRVVSVGINC 155 (247)
Q Consensus 141 ~~~~~~~~~avG~NC 155 (247)
.+. .|+++|.+--
T Consensus 352 ala--~GAd~V~iGs 364 (496)
T 4fxs_A 352 AIA--AGASCVMVGS 364 (496)
T ss_dssp HHH--TTCSEEEEST
T ss_pred HHH--cCCCeEEecH
Confidence 554 3677766653
No 343
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=54.00 E-value=95 Score=25.85 Aligned_cols=78 Identities=18% Similarity=0.067 Sum_probs=41.1
Q ss_pred hhHHHHHHHHHHhhc-CCCEEE--EeCC----CC------cccccccccccCCCCChHHHHHHHHHHHHcCCeEEeecCC
Q 025860 158 PRFISGLILIIKKVT-AKPILI--YPNS----GE------FYDADRKEWVQNTGVSDEDFVSYVSKWCEVGASLVGGCCR 224 (247)
Q Consensus 158 p~~~~~~l~~l~~~~-~~pl~v--yPNa----G~------~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~iIGGCCG 224 (247)
.+.+..+++.+++.. +.|+++ |.|. |. ...... ...--.++.+++..++.....+.|..+|=-+.-
T Consensus 78 ~~~~~~~v~~ir~~~~~~Pi~~m~y~n~v~~~g~~~f~~~~~~aG~-dgvii~dl~~ee~~~~~~~~~~~gl~~i~l~~p 156 (262)
T 2ekc_A 78 FEDVLELSETLRKEFPDIPFLLMTYYNPIFRIGLEKFCRLSREKGI-DGFIVPDLPPEEAEELKAVMKKYVLSFVPLGAP 156 (262)
T ss_dssp HHHHHHHHHHHHHHCTTSCEEEECCHHHHHHHCHHHHHHHHHHTTC-CEEECTTCCHHHHHHHHHHHHHTTCEECCEECT
T ss_pred HHHHHHHHHHHHhhcCCCCEEEEecCcHHHHhhHHHHHHHHHHcCC-CEEEECCCCHHHHHHHHHHHHHcCCcEEEEeCC
Confidence 345667788888877 899888 6662 10 000000 111111244566666666666777654433333
Q ss_pred -CChHHHHHHHHH
Q 025860 225 -TTPNTIKGIYRT 236 (247)
Q Consensus 225 -t~P~hI~al~~~ 236 (247)
++++.|+.+++.
T Consensus 157 ~t~~~rl~~ia~~ 169 (262)
T 2ekc_A 157 TSTRKRIKLICEA 169 (262)
T ss_dssp TCCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHh
Confidence 444566666544
No 344
>1n82_A Xylanase, intra-cellular xylanase; hydrolase; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 3mua_A* 2q8x_A* 3msd_A* 3msg_A* 3mui_A* 3ms8_A
Probab=53.78 E-value=26 Score=30.50 Aligned_cols=51 Identities=14% Similarity=0.078 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHhcCC--CCEEEEec-----CCCHHHHHHHHHHHHhhCCCCcEEEE-EEEc
Q 025860 72 KDFHRRRVQVLVESA--PDLIAFET-----IPNKIEAQAYAELLEEENIKIPAWFS-FNSK 124 (247)
Q Consensus 72 ~~~~~~q~~~l~~~g--vD~i~~ET-----~~~~~E~~aa~~~~~~~~~~~pv~is-~~~~ 124 (247)
.+.+..+++.|.+.| +|.|-+.+ .++..+++.+++.+.+. ++||||| +.+.
T Consensus 187 ~~~~~~~v~~l~~~g~~idgiG~Q~H~~~~~~~~~~~~~~l~~~a~~--G~pi~iTEldi~ 245 (331)
T 1n82_A 187 REKIFALVKSLRDKGIPIHGIGMQAHWSLTRPSLDEIRAAIERYASL--GVVLHITELDVS 245 (331)
T ss_dssp HHHHHHHHHHHHHTTCCCCEEEECCEEESSSSCHHHHHHHHHHHHTT--TCEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHCCCccceEEeceecCCCCCCHHHHHHHHHHHHhc--CCeEEEEeceec
Confidence 345666788887778 49987753 36788899888888766 5899998 4443
No 345
>1w32_A Endo-1,4-beta-xylanase A precursor; mutant, calcium ION, thermostable, glycosyle hydrolase, family 10, error prone PCR, hydrolase; 1.2A {Cellvibrio japonicus} SCOP: c.1.8.3 PDB: 1w2p_A 1w2v_A 1w3h_A 1clx_A 1e5n_A* 1xys_A
Probab=53.40 E-value=24 Score=31.08 Aligned_cols=50 Identities=12% Similarity=0.159 Sum_probs=37.8
Q ss_pred HHHHHHHHHHhcCC--CCEEEEec-----CCCHHHHHHHHHHHH--hhCCCCcEEEE-EEEc
Q 025860 73 DFHRRRVQVLVESA--PDLIAFET-----IPNKIEAQAYAELLE--EENIKIPAWFS-FNSK 124 (247)
Q Consensus 73 ~~~~~q~~~l~~~g--vD~i~~ET-----~~~~~E~~aa~~~~~--~~~~~~pv~is-~~~~ 124 (247)
+.+..+++.|.+.| +|.|-+.. .+++.+++.+++.+. .. ++||+|| +.+.
T Consensus 192 ~~~~~~v~~l~~~G~~iDgiG~Q~H~~~~~p~~~~~~~~l~~~a~~~~--Gl~i~ITElDv~ 251 (348)
T 1w32_A 192 TALVNLVQRLLNNGVPIDGVGFQMHVMNDYPSIANIRQAMQKIVALSP--TLKIKITELDVR 251 (348)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEECCEEESSSSCHHHHHHHHHHHHTTCS--SCEEEEEEEEEE
T ss_pred HHHHHHHHHHHHCCCcccEEEeccccCCCCCCHHHHHHHHHHHhcccC--CCeEEEEeCccc
Confidence 44666888888888 59987754 377899999998888 65 5899998 5543
No 346
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=53.33 E-value=1.3e+02 Score=27.00 Aligned_cols=43 Identities=7% Similarity=-0.037 Sum_probs=31.9
Q ss_pred HHHHHHhcCCCCEEEEecCC-----------CHHHHHHHHHHHHhhCCCCcEEEEE
Q 025860 77 RRVQVLVESAPDLIAFETIP-----------NKIEAQAYAELLEEENIKIPAWFSF 121 (247)
Q Consensus 77 ~q~~~l~~~gvD~i~~ET~~-----------~~~E~~aa~~~~~~~~~~~pv~is~ 121 (247)
+.++.+.++|+|++-+-++. ..+.++.+.++.++. ++|++.++
T Consensus 160 ~~a~~~k~aGa~~vk~q~fkprts~~~f~gl~~egl~~L~~~~~~~--Gl~~~te~ 213 (385)
T 3nvt_A 160 AVAESIKAKGLKLIRGGAFKPRTSPYDFQGLGLEGLKILKRVSDEY--GLGVISEI 213 (385)
T ss_dssp HHHHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHH--TCEEEEEC
T ss_pred HHHHHHHHcCCCeEEcccccCCCChHhhcCCCHHHHHHHHHHHHHc--CCEEEEec
Confidence 37777888999999888742 356666666776766 58998766
No 347
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=53.33 E-value=1.1e+02 Score=26.17 Aligned_cols=148 Identities=11% Similarity=0.074 Sum_probs=79.6
Q ss_pred CCHHHHHHHHHHHHHHHhcCCCCEEEEecCC--CHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHH
Q 025860 66 ITVETLKDFHRRRVQVLVESAPDLIAFETIP--NKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAE 143 (247)
Q Consensus 66 ~s~~e~~~~~~~q~~~l~~~gvD~i~~ET~~--~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~ 143 (247)
++.++..+ .++.|.+.|+|.|=+- +| +..+...+....+.. .+.. +..+.-.. -..++.+++.+.
T Consensus 24 ~~~~~K~~----i~~~L~~~Gv~~IE~g-~p~~~~~d~e~v~~i~~~~-~~~~-i~~l~~~~------~~di~~a~~~~~ 90 (293)
T 3ewb_X 24 FDVKEKIQ----IALQLEKLGIDVIEAG-FPISSPGDFECVKAIAKAI-KHCS-VTGLARCV------EGDIDRAEEALK 90 (293)
T ss_dssp CCHHHHHH----HHHHHHHHTCSEEEEE-CGGGCHHHHHHHHHHHHHC-CSSE-EEEEEESS------HHHHHHHHHHHT
T ss_pred CCHHHHHH----HHHHHHHcCCCEEEEe-CCCCCccHHHHHHHHHHhc-CCCE-EEEEecCC------HHHHHHHHHHHh
Confidence 57777666 5666778999987322 33 334544443433332 1222 33332110 113566666665
Q ss_pred hCCCCeEEEEcCC-Ch------------hH---HHHHHHHHHhhcCCCEEEEeCCCCcccccccccccCCCCChHHHHHH
Q 025860 144 SCKRVVSVGINCT-PP------------RF---ISGLILIIKKVTAKPILIYPNSGEFYDADRKEWVQNTGVSDEDFVSY 207 (247)
Q Consensus 144 ~~~~~~avG~NC~-~p------------~~---~~~~l~~l~~~~~~pl~vyPNaG~~~d~~~~~~~~~~~~~~~~~~~~ 207 (247)
. .+++.|.+-.+ +. +. +.+.++..++. ...+.+.+ .|. + ..+++.+.+.
T Consensus 91 ~-ag~~~v~i~~~~Sd~~~~~nl~~s~~e~l~~~~~~v~~a~~~-g~~v~~~~-----~d~------~--~~~~~~~~~~ 155 (293)
T 3ewb_X 91 D-AVSPQIHIFLATSDVHMEYKLKMSRAEVLASIKHHISYARQK-FDVVQFSP-----EDA------T--RSDRAFLIEA 155 (293)
T ss_dssp T-CSSEEEEEEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHHTT-CSCEEEEE-----ETG------G--GSCHHHHHHH
T ss_pred h-cCCCEEEEEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHhC-CCEEEEEe-----ccC------C--CCCHHHHHHH
Confidence 4 46776665332 22 11 22222322222 33333322 111 1 1358888999
Q ss_pred HHHHHHcCCeEEeecC--C-CChHHHHHHHHHhhCCC
Q 025860 208 VSKWCEVGASLVGGCC--R-TTPNTIKGIYRTLSNRS 241 (247)
Q Consensus 208 ~~~~~~~G~~iIGGCC--G-t~P~hI~al~~~l~~~~ 241 (247)
++.+.+.|+..|.=|= | .+|..+..+-+.++..-
T Consensus 156 ~~~~~~~G~~~i~l~DT~G~~~P~~v~~lv~~l~~~~ 192 (293)
T 3ewb_X 156 VQTAIDAGATVINIPDTVGYTNPTEFGQLFQDLRREI 192 (293)
T ss_dssp HHHHHHTTCCEEEEECSSSCCCHHHHHHHHHHHHHHC
T ss_pred HHHHHHcCCCEEEecCCCCCCCHHHHHHHHHHHHHhc
Confidence 9999999998876543 2 59999998877776543
No 348
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=53.22 E-value=80 Score=27.69 Aligned_cols=49 Identities=8% Similarity=-0.138 Sum_probs=37.1
Q ss_pred HHHHHHHHHhCCCCeEEEEcCC-ChhHHHHHHHHHHhhc--CCCEEEEeCCCC
Q 025860 135 LLECASIAESCKRVVSVGINCT-PPRFISGLILIIKKVT--AKPILIYPNSGE 184 (247)
Q Consensus 135 ~~~~~~~~~~~~~~~avG~NC~-~p~~~~~~l~~l~~~~--~~pl~vyPNaG~ 184 (247)
+.+.++.+.+ .+.++|=+++. +++.....++.+++.. +.+|.+-.|.|.
T Consensus 149 ~~~~a~~~~~-~Gf~~iKik~g~~~~~~~e~v~avr~a~g~d~~l~vDan~~~ 200 (379)
T 2rdx_A 149 TRAELARHRA-AGYRQFQIKVGADWQSDIDRIRACLPLLEPGEKAMADANQGW 200 (379)
T ss_dssp HHHHHHHHHH-TTCCEEEEECCSCHHHHHHHHHHHGGGSCTTCEEEEECTTCS
T ss_pred HHHHHHHHHH-cCCCEEEEeccCCHHHHHHHHHHHHHhcCCCCEEEEECCCCC
Confidence 4444555555 58899999997 5777788888888775 588999999874
No 349
>1dbt_A Orotidine 5'-phosphate decarboxylase; UMP, TIM barrel, lyase; HET: U5P; 2.40A {Bacillus subtilis} SCOP: c.1.2.3
Probab=53.21 E-value=65 Score=26.42 Aligned_cols=75 Identities=12% Similarity=0.140 Sum_probs=50.0
Q ss_pred HHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEEcCC-ChhHHHHHHHHHHhh---cCC-C-
Q 025860 102 QAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGINCT-PPRFISGLILIIKKV---TAK-P- 175 (247)
Q Consensus 102 ~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~NC~-~p~~~~~~l~~l~~~---~~~-p- 175 (247)
...++.+++. +.++++-+.+.+. |.+....++.+.+ .+++.|-+++. +++.+.++++.+++. -.. |
T Consensus 44 ~~~v~~l~~~--~~~v~lD~kl~Di-----p~t~~~~~~~~~~-~Gad~vtvH~~~g~~~l~~~~~~~~~~~~~g~~~~~ 115 (239)
T 1dbt_A 44 PSIVKQLKER--NCELFLDLKLHDI-----PTTVNKAMKRLAS-LGVDLVNVHAAGGKKMMQAALEGLEEGTPAGKKRPS 115 (239)
T ss_dssp HHHHHHHHHT--TCEEEEEEEECSC-----HHHHHHHHHHHHT-TTCSEEEEEGGGCHHHHHHHHHHHHHHSCTTSCCCE
T ss_pred HHHHHHHHHC--CCcEEEEeccccc-----hHHHHHHHHHHHh-cCCCEEEEeCcCCHHHHHHHHHHHHhhhccCCCCcc
Confidence 3466677765 4677777766432 4445567777766 68999999996 555567888888765 223 5
Q ss_pred -EEEEeCCCC
Q 025860 176 -ILIYPNSGE 184 (247)
Q Consensus 176 -l~vyPNaG~ 184 (247)
+++-++...
T Consensus 116 ~~~V~~~ts~ 125 (239)
T 1dbt_A 116 LIAVTQLTST 125 (239)
T ss_dssp EEEECSCTTC
T ss_pred EEEEEEcCCC
Confidence 667776543
No 350
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=53.18 E-value=53 Score=26.70 Aligned_cols=113 Identities=10% Similarity=0.069 Sum_probs=62.5
Q ss_pred HHHHHHhcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEEcCC
Q 025860 77 RRVQVLVESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGINCT 156 (247)
Q Consensus 77 ~q~~~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~NC~ 156 (247)
++++..+++|+|++..- .. -..++++.++. +.|++... .++.++.+... .+++.|++==.
T Consensus 79 d~~~~A~~aGAd~v~~p---~~--d~~v~~~~~~~--g~~~i~G~-----------~t~~e~~~A~~--~Gad~v~~Fpa 138 (214)
T 1wbh_A 79 QQLAEVTEAGAQFAISP---GL--TEPLLKAATEG--TIPLIPGI-----------STVSELMLGMD--YGLKEFKFFPA 138 (214)
T ss_dssp HHHHHHHHHTCSCEEES---SC--CHHHHHHHHHS--SSCEEEEE-----------SSHHHHHHHHH--TTCCEEEETTT
T ss_pred HHHHHHHHcCCCEEEcC---CC--CHHHHHHHHHh--CCCEEEec-----------CCHHHHHHHHH--CCCCEEEEecC
Confidence 46667777888888643 21 12344555555 46776542 13667766553 47899988211
Q ss_pred ChhHHHHHHHHHHhhc-CCCEEEEeCCCCcccccccccccCCCCChHHHHHHHHHHHHc-CCeEEeecCCCChHHH
Q 025860 157 PPRFISGLILIIKKVT-AKPILIYPNSGEFYDADRKEWVQNTGVSDEDFVSYVSKWCEV-GASLVGGCCRTTPNTI 230 (247)
Q Consensus 157 ~p~~~~~~l~~l~~~~-~~pl~vyPNaG~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-G~~iIGGCCGt~P~hI 230 (247)
.+-.-...|+.++... +.|+ .|=+|. ++ +.+.+|++. |+..+||--=+..+.|
T Consensus 139 ~~~gG~~~lk~i~~~~~~ipv--vaiGGI---------------~~----~n~~~~l~agg~~~v~gS~i~~~~~~ 193 (214)
T 1wbh_A 139 EANGGVKALQAIAGPFSQVRF--CPTGGI---------------SP----ANYRDYLALKSVLCIGGSWLVPADAL 193 (214)
T ss_dssp TTTTHHHHHHHHHTTCTTCEE--EEBSSC---------------CT----TTHHHHHTSTTBSCEEEGGGSCHHHH
T ss_pred ccccCHHHHHHHhhhCCCCeE--EEECCC---------------CH----HHHHHHHhcCCCeEEEeccccChhhh
Confidence 1111256677776654 4553 444442 33 244558887 7777775443444433
No 351
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=52.32 E-value=92 Score=25.18 Aligned_cols=73 Identities=19% Similarity=0.103 Sum_probs=37.1
Q ss_pred HHHHHhcCCCCEEEEecCCC-----HHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEE
Q 025860 78 RVQVLVESAPDLIAFETIPN-----KIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVG 152 (247)
Q Consensus 78 q~~~l~~~gvD~i~~ET~~~-----~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG 152 (247)
.++.+.+.|+|.|-+-.... ...+. .++.+++. ++|+++.--+ .++.++.+.+ . .++++|.
T Consensus 35 ~a~~~~~~Gad~i~v~d~~~~~~~~~~~~~-~i~~i~~~--~ipvi~~Ggi---------~~~~~~~~~~-~-~Gad~V~ 100 (241)
T 1qo2_A 35 LVEKLIEEGFTLIHVVDLSNAIENSGENLP-VLEKLSEF--AEHIQIGGGI---------RSLDYAEKLR-K-LGYRRQI 100 (241)
T ss_dssp HHHHHHHTTCCCEEEEEHHHHHHCCCTTHH-HHHHGGGG--GGGEEEESSC---------CSHHHHHHHH-H-TTCCEEE
T ss_pred HHHHHHHcCCCEEEEecccccccCCchhHH-HHHHHHhc--CCcEEEECCC---------CCHHHHHHHH-H-CCCCEEE
Confidence 56667789999997632110 00111 22223322 5888864311 3444454433 3 4688887
Q ss_pred EcCC---ChhHHHHH
Q 025860 153 INCT---PPRFISGL 164 (247)
Q Consensus 153 ~NC~---~p~~~~~~ 164 (247)
+... .|+.+..+
T Consensus 101 lg~~~l~~p~~~~~~ 115 (241)
T 1qo2_A 101 VSSKVLEDPSFLKSL 115 (241)
T ss_dssp ECHHHHHCTTHHHHH
T ss_pred ECchHhhChHHHHHH
Confidence 7664 35444444
No 352
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=52.31 E-value=1.1e+02 Score=27.05 Aligned_cols=144 Identities=8% Similarity=0.026 Sum_probs=79.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCCEEEEecC----------C-----------C-HHHH---HHHHHHHHhh-CCCCcEEEEE
Q 025860 68 VETLKDFHRRRVQVLVESAPDLIAFETI----------P-----------N-KIEA---QAYAELLEEE-NIKIPAWFSF 121 (247)
Q Consensus 68 ~~e~~~~~~~q~~~l~~~gvD~i~~ET~----------~-----------~-~~E~---~aa~~~~~~~-~~~~pv~is~ 121 (247)
.+++.+.|.+.++.+.++|.|.|=+--- | + ...+ ..+++++++. +.+ ||.+-+
T Consensus 161 I~~~i~~f~~aA~~a~~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~-~v~vrl 239 (377)
T 2r14_A 161 IPGIVEDYRQAAQRAKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRARFPLEVVDAVAEVFGPE-RVGIRL 239 (377)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGG-GEEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEcCcccchHHhccCCccccCCCccCcchhhchHHHHHHHHHHHHHcCCC-cEEEEe
Confidence 3556677888888888899999855321 1 1 1233 3345556653 334 888888
Q ss_pred EEcCC-CcccCCCcHHHH---HHHHHhCCCCeEEEEcCCC----hh-HHHHHHHHHHhhcCCCEEEEeCCCCcccccccc
Q 025860 122 NSKDG-VNVVSGDSLLEC---ASIAESCKRVVSVGINCTP----PR-FISGLILIIKKVTAKPILIYPNSGEFYDADRKE 192 (247)
Q Consensus 122 ~~~~~-~~l~~G~~~~~~---~~~~~~~~~~~avG~NC~~----p~-~~~~~l~~l~~~~~~pl~vyPNaG~~~d~~~~~ 192 (247)
+..+. ....+|.+++++ ++.+.+ .+++.|-+-... +. .-...++.+++..+.||++ |.|.
T Consensus 240 s~~~~~~~~~~~~~~~~~~~la~~le~-~Gvd~i~v~~~~~~~~~~~~~~~~~~~ik~~~~iPvi~--~Ggi-------- 308 (377)
T 2r14_A 240 TPFLELFGLTDDEPEAMAFYLAGELDR-RGLAYLHFNEPDWIGGDITYPEGFREQMRQRFKGGLIY--CGNY-------- 308 (377)
T ss_dssp CTTCCCTTCCCSCHHHHHHHHHHHHHH-TTCSEEEEECCC------CCCTTHHHHHHHHCCSEEEE--ESSC--------
T ss_pred ccccccCCCCCCCCHHHHHHHHHHHHH-cCCCEEEEeCCcccCCCCcchHHHHHHHHHHCCCCEEE--ECCC--------
Confidence 65321 112245666654 444555 588888775521 10 0134566777777888654 4431
Q ss_pred cccCCCCChHHHHHHHHHHHHcC-CeEEeecCC--CChHHHHHHH
Q 025860 193 WVQNTGVSDEDFVSYVSKWCEVG-ASLVGGCCR--TTPNTIKGIY 234 (247)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~G-~~iIGGCCG--t~P~hI~al~ 234 (247)
++ +.+.+.++.| +.+|+=+=+ ..|+-.+.++
T Consensus 309 -------~~----~~a~~~l~~g~aD~V~igR~~l~~P~l~~k~~ 342 (377)
T 2r14_A 309 -------DA----GRAQARLDDNTADAVAFGRPFIANPDLPERFR 342 (377)
T ss_dssp -------CH----HHHHHHHHTTSCSEEEESHHHHHCTTHHHHHH
T ss_pred -------CH----HHHHHHHHCCCceEEeecHHHHhCchHHHHHH
Confidence 22 2334455555 777663322 3566665554
No 353
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=51.84 E-value=1.1e+02 Score=26.36 Aligned_cols=65 Identities=9% Similarity=-0.102 Sum_probs=41.4
Q ss_pred CCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEEcCCC---hhH---HHHHHHHHHhhc-CCCEEEEeCCC
Q 025860 114 KIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGINCTP---PRF---ISGLILIIKKVT-AKPILIYPNSG 183 (247)
Q Consensus 114 ~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~NC~~---p~~---~~~~l~~l~~~~-~~pl~vyPNaG 183 (247)
++||.++- +.-.+=+.+..+++++....+-..+.+-|+. +.. =+..+..|++.. +.|+++.|.=.
T Consensus 134 gkPVilK~-----G~~~t~~ei~~ave~i~~~Gn~~i~L~erg~~y~~~~~~vdl~~i~~lk~~~~~~pV~~D~sHs 205 (285)
T 3sz8_A 134 GKPVNVKK-----PQFMSPTQLKHVVSKCGEVGNDRVMLCERGSSFGYDNLVVDMLGFRQMAETTGGCPVIFDVTHS 205 (285)
T ss_dssp SSCEEEEC-----CTTSCGGGTHHHHHHHHHTTCCCEEEEECCEECSSSCEECCTTHHHHHHHHTTSCCEEEETTTT
T ss_pred CCcEEEeC-----CCCCCHHHHHHHHHHHHHcCCCcEEEEeCCCCCCCCcCccCHHHHHHHHHhCCCCCEEEeCCCc
Confidence 68999764 2211223557788888764455788888963 222 145666777777 59998877543
No 354
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=51.27 E-value=1.2e+02 Score=26.22 Aligned_cols=94 Identities=7% Similarity=-0.065 Sum_probs=59.1
Q ss_pred HHHHHhcCCCCEEEEecCC--------------CHHHHHHHHHHHHhhC--CCCcEEEEEEEcCCCcccCCCcHHHHHHH
Q 025860 78 RVQVLVESAPDLIAFETIP--------------NKIEAQAYAELLEEEN--IKIPAWFSFNSKDGVNVVSGDSLLECASI 141 (247)
Q Consensus 78 q~~~l~~~gvD~i~~ET~~--------------~~~E~~aa~~~~~~~~--~~~pv~is~~~~~~~~l~~G~~~~~~~~~ 141 (247)
-++.|.++|++.+-||-.. +.+|+..=++++++.- .+.+++|.--.+ ... +..++++++.
T Consensus 100 tv~~l~~aGaagv~iEDq~~~Krcgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d~~I~ARTD--a~~--~~gldeAi~R 175 (302)
T 3fa4_A 100 TTEQYSRSGVAAFHIEDQVQTKRCGHLAGKILVDTDTYVTRIRAAVQARQRIGSDIVVIARTD--SLQ--THGYEESVAR 175 (302)
T ss_dssp HHHHHHHTTCCEEEECSBCCC-------CCCBCCHHHHHHHHHHHHHHHHHHTCCCEEEEEEC--CHH--HHCHHHHHHH
T ss_pred HHHHHHHcCCcEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCEEEEEEec--ccc--cCCHHHHHHH
Confidence 5777888999999999764 3455444333333220 034555554443 222 2458888888
Q ss_pred HHh--CCCCeEEEEcCC-ChhHHHHHHHHHHhhcCCCEEE
Q 025860 142 AES--CKRVVSVGINCT-PPRFISGLILIIKKVTAKPILI 178 (247)
Q Consensus 142 ~~~--~~~~~avG~NC~-~p~~~~~~l~~l~~~~~~pl~v 178 (247)
+.. ..|+|+|=+-+. +++.+..+.+.+. ++|+.+
T Consensus 176 a~ay~eAGAD~ifi~g~~~~~ei~~~~~~~~---~~Pl~~ 212 (302)
T 3fa4_A 176 LRAARDAGADVGFLEGITSREMARQVIQDLA---GWPLLL 212 (302)
T ss_dssp HHHHHTTTCSEEEETTCCCHHHHHHHHHHTT---TSCEEE
T ss_pred HHHHHHcCCCEEeecCCCCHHHHHHHHHHhc---CCceeE
Confidence 753 358999999885 6777776666542 478755
No 355
>2jfn_A Glutamate racemase; cell WALL, isomerase, cell shape, UDP- murnac-Ala, peptidoglycan biosynthesis, peptidoglycan synthesis; HET: GLU UMA; 1.9A {Escherichia coli}
Probab=51.27 E-value=79 Score=26.75 Aligned_cols=54 Identities=15% Similarity=0.067 Sum_probs=38.6
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHhc-CCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEE
Q 025860 60 GNYGDAITVETLKDFHRRRVQVLVE-SAPDLIAFETIPNKIEAQAYAELLEEENIKIPAW 118 (247)
Q Consensus 60 g~y~~~~s~~e~~~~~~~q~~~l~~-~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~ 118 (247)
.+|+. .+.+++.+.-...++.|++ .|+|+|++=+.+.-. .+++.+++.. ++||+
T Consensus 58 ~PyG~-~s~~~i~~~~~~i~~~ll~~~g~d~IviaCNTas~---~~l~~lr~~~-~iPVi 112 (285)
T 2jfn_A 58 FPYGE-KSEAFIVERVVAIVTAVQERYPLALAVVACNTAST---VSLPALREKF-DFPVV 112 (285)
T ss_dssp CCTTT-SCHHHHHHHHHHHHHHHHHHSCCSEEEECCHHHHH---HHHHHHHHHC-SSCEE
T ss_pred CCCcc-CCHHHHHHHHHHHHHHHHHhCCCCEEEEECccccH---HHHHHHHHhC-CCCEE
Confidence 35554 5889999988888887766 899999987644221 2566677654 68987
No 356
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=51.08 E-value=1.2e+02 Score=25.99 Aligned_cols=99 Identities=14% Similarity=0.111 Sum_probs=57.6
Q ss_pred CHHHHHHHHHHHHHHHhcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcC------CCcccCCCcHH---H
Q 025860 67 TVETLKDFHRRRVQVLVESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKD------GVNVVSGDSLL---E 137 (247)
Q Consensus 67 s~~e~~~~~~~q~~~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~------~~~l~~G~~~~---~ 137 (247)
+.++..+ -+..|.++|++.+=+|-..... ..++.+.+. ++|+.--+-+.+ ++...-|.+-+ +
T Consensus 104 s~~~a~~----~a~rl~kaGa~aVklEdg~~~~---~~i~~l~~~--GIpv~gHlgltPq~~~~~gg~~vqgrt~~~a~~ 174 (275)
T 3vav_A 104 TPADAFA----SAVKLMRAGAQMVKFEGGEWLA---ETVRFLVER--AVPVCAHVGLTPQSVHAFGGFKVQGKTEAGAAQ 174 (275)
T ss_dssp SHHHHHH----HHHHHHHTTCSEEEEECCGGGH---HHHHHHHHT--TCCEEEEEESCGGGHHHHC---CCCCSHHHHHH
T ss_pred CHHHHHH----HHHHHHHcCCCEEEECCchhHH---HHHHHHHHC--CCCEEEecCCCceEEeccCCeEEEcCCHHHHHH
Confidence 4555444 2333445799999999875443 344455555 578887665432 12222454433 3
Q ss_pred HHHHH---HhCCCCeEEEEcCCChhHHHHHHHHHHhhcCCCEEEE
Q 025860 138 CASIA---ESCKRVVSVGINCTPPRFISGLILIIKKVTAKPILIY 179 (247)
Q Consensus 138 ~~~~~---~~~~~~~avG~NC~~p~~~~~~l~~l~~~~~~pl~vy 179 (247)
+++.. .+ .|+++|=+-|...+ +++.+.+..++|++-.
T Consensus 175 ~i~rA~a~~e-AGA~~ivlE~vp~~----~a~~It~~l~iP~igI 214 (275)
T 3vav_A 175 LLRDARAVEE-AGAQLIVLEAVPTL----VAAEVTRELSIPTIGI 214 (275)
T ss_dssp HHHHHHHHHH-HTCSEEEEESCCHH----HHHHHHHHCSSCEEEE
T ss_pred HHHHHHHHHH-cCCCEEEecCCCHH----HHHHHHHhCCCCEEEE
Confidence 33322 33 58999999999543 4556666678997544
No 357
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A*
Probab=50.91 E-value=1.2e+02 Score=26.17 Aligned_cols=102 Identities=13% Similarity=0.060 Sum_probs=57.8
Q ss_pred HHHHHHHHHHHHHHhcCC--CCEE--EEecCC----------CHHHH----HHHHHHHHhhC--CCCcEEEEEEEcCCCc
Q 025860 69 ETLKDFHRRRVQVLVESA--PDLI--AFETIP----------NKIEA----QAYAELLEEEN--IKIPAWFSFNSKDGVN 128 (247)
Q Consensus 69 ~e~~~~~~~q~~~l~~~g--vD~i--~~ET~~----------~~~E~----~aa~~~~~~~~--~~~pv~is~~~~~~~~ 128 (247)
+++.++-++.++.|.+.| ++++ ..|+.. +...+ +++.+++|+.. ++.++.+.+.
T Consensus 107 ~~~~~yt~~vl~~l~~~g~~~~~v~vGNEi~~g~~w~~g~~~~~~~~~~l~~~~~~avR~~~~~p~~~v~ih~~------ 180 (332)
T 1hjs_A 107 WKLYNYTLDAANKLQNAGIQPTIVSIGNEIRAGLLWPTGRTENWANIARLLHSAAWGIKDSSLSPKPKIMIHLD------ 180 (332)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCSEEEESSSGGGEETBTTEETTCHHHHHHHHHHHHHHHHTSCCSSCCEEEEEES------
T ss_pred HHHHHHHHHHHHHHHHcCCCCCEEEEeecccccccCcCCCccCHHHHHHHHHHHHHHHHHhccCCCCeEEEEeC------
Confidence 455677778888888766 5654 346442 23333 33455677654 4445655442
Q ss_pred ccCCCc---HHHHHHHHHhCC-----CCeEEEEcCCC-------hhHHHHHHHHHHhhcCCCEEE
Q 025860 129 VVSGDS---LLECASIAESCK-----RVVSVGINCTP-------PRFISGLILIIKKVTAKPILI 178 (247)
Q Consensus 129 l~~G~~---~~~~~~~~~~~~-----~~~avG~NC~~-------p~~~~~~l~~l~~~~~~pl~v 178 (247)
.|.. +.-....+.+.. ..|.||+|.-. ++.+...|+.+.+.-++||++
T Consensus 181 --~~~~~~~~~~~~d~~~~~g~~~~~~~DvIG~syYp~w~~~~~~~~l~~~l~~~~~rygKpv~v 243 (332)
T 1hjs_A 181 --NGWDWGTQNWWYTNVLKQGTLELSDFDMMGVSFYPFYSSSATLSALKSSLDNMAKTWNKEIAV 243 (332)
T ss_dssp --CTTCHHHHHHHHHHHHTTSSSCGGGCCEEEEECCSSSCTTCCHHHHHHHHHHHHHHHCCEEEE
T ss_pred --CccchHHHHHHHHHHHhcCCCCCCCcCEEEEecCcccCCCCCHHHHHHHHHHHHHHHCCCEEE
Confidence 2322 222234343322 57999999832 245556666666555899876
No 358
>2wlt_A L-asparaginase; hydrolase; 1.40A {Helicobacter pylori} PDB: 2wt4_A
Probab=50.78 E-value=34 Score=30.04 Aligned_cols=49 Identities=10% Similarity=-0.079 Sum_probs=33.9
Q ss_pred HHHHHhcCCCCEEEEecCCCH---HHHHHHHHHHHhhCCCCcEEEEEEEcCCCc
Q 025860 78 RVQVLVESAPDLIAFETIPNK---IEAQAYAELLEEENIKIPAWFSFNSKDGVN 128 (247)
Q Consensus 78 q~~~l~~~gvD~i~~ET~~~~---~E~~aa~~~~~~~~~~~pv~is~~~~~~~~ 128 (247)
.++.+++.|++.|++|++..- .++..+++-+.+. ++||+++-.|..+..
T Consensus 234 ~l~~~~~~g~~GiVle~~G~Gn~p~~~~~~l~~a~~~--Gi~VV~~Sr~~~G~v 285 (332)
T 2wlt_A 234 LFQASLNSHAKGVVIAGVGNGNVSAGFLKAMQEASQM--GVVIVRSSRVGSGGV 285 (332)
T ss_dssp HHHHHHHTTCSEEEEEEBTTTBCCHHHHHHHHHHHHT--TCEEEEEESSSSSCC
T ss_pred HHHHHHhCCCCEEEEeeECCCCCCHHHHHHHHHHHHC--CCEEEEECCCCCCCc
Confidence 566777889999999998752 4455545444443 589988887765443
No 359
>3n2b_A Diaminopimelate decarboxylase; LYSA, lyase, structural genom center for structural genomics of infectious diseases, CSGI; 1.80A {Vibrio cholerae}
Probab=50.59 E-value=1.1e+02 Score=27.67 Aligned_cols=70 Identities=17% Similarity=0.210 Sum_probs=42.5
Q ss_pred hcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCC-----------cccCCCcHHHH---HHHHHhCCCC
Q 025860 83 VESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGV-----------NVVSGDSLLEC---ASIAESCKRV 148 (247)
Q Consensus 83 ~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~-----------~l~~G~~~~~~---~~~~~~~~~~ 148 (247)
++.|+..+ ++-|+.|++.+.+.+++.+...++++-+....+. .-+-|.+++++ ++.+....++
T Consensus 140 ~~~gv~~~---~vds~~el~~l~~~a~~~~~~~~V~lRvn~~~~~~~~~~i~tG~~~sKfG~~~~~~~~~~~~~~~~~~l 216 (441)
T 3n2b_A 140 LQLKIKCF---NVESEPELQRLNKVAGELGVKAPISLRINPDVDAKTHPYISTGLRDNKFGITFDRAAQVYRLAHSLPNL 216 (441)
T ss_dssp HHTTCSEE---EECSHHHHHHHHHHHHHHTCCEEEEEEBCCCCCTTTCHHHHHHHHTSSSSBCGGGHHHHHHHHHHCTTE
T ss_pred HHCCCCEE---EEcCHHHHHHHHHHHHhcCCCcEEEEEeccCCCcCCCcccccCCCCCcccCCHHHHHHHHHHHhcCCCe
Confidence 34677655 4567888888888877765456666666432110 13457655544 4444444577
Q ss_pred eEEEEcC
Q 025860 149 VSVGINC 155 (247)
Q Consensus 149 ~avG~NC 155 (247)
...|+-|
T Consensus 217 ~l~Glh~ 223 (441)
T 3n2b_A 217 DVHGIDC 223 (441)
T ss_dssp EEEEEEC
T ss_pred EEEEEEE
Confidence 8888887
No 360
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=50.58 E-value=38 Score=31.47 Aligned_cols=65 Identities=11% Similarity=0.125 Sum_probs=35.6
Q ss_pred HHHHHhcCCCCEEEEe----c-----------CCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHH
Q 025860 78 RVQVLVESAPDLIAFE----T-----------IPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIA 142 (247)
Q Consensus 78 q~~~l~~~gvD~i~~E----T-----------~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~ 142 (247)
.++.+.++|+|+|.+- + .|.+..+..+.+++++. ++|++.+.= + .+..++++.+
T Consensus 310 ~a~~~~~aGad~i~vg~g~gsi~~~~~~~g~g~p~~~~l~~v~~~~~~~--~iPVIa~GG------I---~~~~di~kal 378 (511)
T 3usb_A 310 ATKALIEAGANVVKVGIGPGSICTTRVVAGVGVPQLTAVYDCATEARKH--GIPVIADGG------I---KYSGDMVKAL 378 (511)
T ss_dssp HHHHHHHHTCSEEEECSSCSTTCCHHHHHCCCCCHHHHHHHHHHHHHTT--TCCEEEESC------C---CSHHHHHHHH
T ss_pred HHHHHHHhCCCEEEECCCCccccccccccCCCCCcHHHHHHHHHHHHhC--CCcEEEeCC------C---CCHHHHHHHH
Confidence 3556677888888751 1 34444444444455544 478876531 1 2345555555
Q ss_pred HhCCCCeEEEEcC
Q 025860 143 ESCKRVVSVGINC 155 (247)
Q Consensus 143 ~~~~~~~avG~NC 155 (247)
. .|+++|.+-=
T Consensus 379 a--~GA~~V~vGs 389 (511)
T 3usb_A 379 A--AGAHVVMLGS 389 (511)
T ss_dssp H--TTCSEEEEST
T ss_pred H--hCchhheecH
Confidence 4 3677776653
No 361
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=50.56 E-value=71 Score=28.39 Aligned_cols=66 Identities=12% Similarity=0.142 Sum_probs=43.8
Q ss_pred HHHHHHHHHHhcCCCCEEEEe-cC--CCHHHHHHHHHHHHhhCCCC-cEEEEEEEcCCCcccCCCcHHHHHHHH
Q 025860 73 DFHRRRVQVLVESAPDLIAFE-TI--PNKIEAQAYAELLEEENIKI-PAWFSFNSKDGVNVVSGDSLLECASIA 142 (247)
Q Consensus 73 ~~~~~q~~~l~~~gvD~i~~E-T~--~~~~E~~aa~~~~~~~~~~~-pv~is~~~~~~~~l~~G~~~~~~~~~~ 142 (247)
+++.+.++.+.+.|+|.|.+= |+ ..+.++...++.+++.-++. .+.+++.+.++ .|..++.++..+
T Consensus 157 ~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~~~~l~~H~Hnd----~GlAvAN~laAv 226 (370)
T 3rmj_A 157 DFLAEICGAVIEAGATTINIPDTVGYSIPYKTEEFFRELIAKTPNGGKVVWSAHCHND----LGLAVANSLAAL 226 (370)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECSSSCCCHHHHHHHHHHHHHHSTTGGGSEEEEECBCT----TSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEecCccCCcCHHHHHHHHHHHHHhCCCcCceEEEEEeCCC----CChHHHHHHHHH
Confidence 445557777888999988654 54 45788999998888752121 17788988764 354555555444
No 362
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=50.37 E-value=94 Score=24.69 Aligned_cols=131 Identities=13% Similarity=-0.012 Sum_probs=68.3
Q ss_pred CCCCEEEEecCCCHHHH--HHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEEcCCChhHHH
Q 025860 85 SAPDLIAFETIPNKIEA--QAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGINCTPPRFIS 162 (247)
Q Consensus 85 ~gvD~i~~ET~~~~~E~--~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~NC~~p~~~~ 162 (247)
.|.|.+.++.+..+=+. ...++.+++.. +.++++-+.+.|- +.++...++.+.+ .+++.|-+++.....+
T Consensus 21 ~~~~~~~~kv~~~~f~~~G~~~i~~lr~~~-~~~v~~D~kl~DI-----~~t~~~~v~~~~~-~Gad~vtvh~~~g~~~- 92 (208)
T 2czd_A 21 VKDYISMIKVNWPLILGSGVDIIRRLKEET-GVEIIADLKLADI-----PNTNRLIARKVFG-AGADYVIVHTFVGRDS- 92 (208)
T ss_dssp HGGGCSEEEEEHHHHHHHCTTHHHHHHHHH-CCEEEEEEEECSC-----HHHHHHHHHHHHH-TTCSEEEEESTTCHHH-
T ss_pred hcccccEEEecHHHHHhhCHHHHHHHHHcC-CCEEEEEeeeCch-----HHHHHHHHHHHHh-cCCCEEEEeccCCHHH-
Confidence 34555555554332211 22455566642 3677766665432 4566777777776 5899999999733333
Q ss_pred HHHHHHHhhcCCCEEEEeCCCCcccccccccccCCCCChHHHHHHHHHHHHcCCeEEeecCCCChHHHHHHHHHh
Q 025860 163 GLILIIKKVTAKPILIYPNSGEFYDADRKEWVQNTGVSDEDFVSYVSKWCEVGASLVGGCCRTTPNTIKGIYRTL 237 (247)
Q Consensus 163 ~~l~~l~~~~~~pl~vyPNaG~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~iIGGCCGt~P~hI~al~~~l 237 (247)
++.+++.. -+.+.|.... ..+... . .+.....++.-.+.|...+ =|-.++|+.++.|++.+
T Consensus 93 --i~~~~~~~--gv~vl~~t~~------~~~~~~--~-~~~v~~~~~~a~~~G~~G~-~~~~~~~~~i~~lr~~~ 153 (208)
T 2czd_A 93 --VMAVKELG--EIIMVVEMSH------PGALEF--I-NPLTDRFIEVANEIEPFGV-IAPGTRPERIGYIRDRL 153 (208)
T ss_dssp --HHHHHTTS--EEEEECCCCS------GGGGTT--T-GGGHHHHHHHHHHHCCSEE-ECCCSSTHHHHHHHHHS
T ss_pred --HHHHHHhC--CcEEEEecCC------cchhhH--H-HHHHHHHHHHHHHhCCcEE-EECCCChHHHHHHHHhC
Confidence 44444432 3444443211 111110 0 1122223333445576544 25567788898888775
No 363
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=50.29 E-value=1.1e+02 Score=26.99 Aligned_cols=148 Identities=9% Similarity=0.007 Sum_probs=79.9
Q ss_pred CHHHHHHHHHHHHHHHhcCCCCEEEEecC-CCHHHHHHHHHHHHhh-CCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHh
Q 025860 67 TVETLKDFHRRRVQVLVESAPDLIAFETI-PNKIEAQAYAELLEEE-NIKIPAWFSFNSKDGVNVVSGDSLLECASIAES 144 (247)
Q Consensus 67 s~~e~~~~~~~q~~~l~~~gvD~i~~ET~-~~~~E~~aa~~~~~~~-~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~ 144 (247)
+.+++. ++++.+.+.|.|.|=+-.- +++.+....++++++. +.+.++.+.. + .|-+++++++.+..
T Consensus 175 ~~e~~~----~~a~~~~~~Gf~~vKik~g~~~~~~d~e~v~avR~avG~d~~l~vDa----n----~~~~~~~ai~~~~~ 242 (398)
T 2pp0_A 175 PLDQVL----KNVVISRENGIGGIKLKVGQPNCAEDIRRLTAVREALGDEFPLMVDA----N----QQWDRETAIRMGRK 242 (398)
T ss_dssp CHHHHH----HHHHHHHHTTCSCEEEECCCSCHHHHHHHHHHHHHHHCSSSCEEEEC----T----TCSCHHHHHHHHHH
T ss_pred CHHHHH----HHHHHHHHhCCCeEEEecCCCCHHHHHHHHHHHHHHcCCCCeEEEEC----C----CCCCHHHHHHHHHH
Confidence 455543 3566666788777755322 3677778888888875 5567776533 2 45677877766543
Q ss_pred --CCCCeEEEEcCCChhHHHHHHHHHHhhcCCCEEEEeCCCCcccccccccccCC-----CC------ChHHHHHHHHHH
Q 025860 145 --CKRVVSVGINCTPPRFISGLILIIKKVTAKPILIYPNSGEFYDADRKEWVQNT-----GV------SDEDFVSYVSKW 211 (247)
Q Consensus 145 --~~~~~avG~NC~~p~~~~~~l~~l~~~~~~pl~vyPNaG~~~d~~~~~~~~~~-----~~------~~~~~~~~~~~~ 211 (247)
..+++.|==-| .++. ...++.+++..+.||+.==+.....+. ..+.... .. +..+..+.+.-.
T Consensus 243 l~~~~i~~iEqP~-~~~d-~~~~~~l~~~~~iPIa~dE~~~~~~~~--~~~i~~~~~d~v~ik~~~~GGite~~~i~~~A 318 (398)
T 2pp0_A 243 MEQFNLIWIEEPL-DAYD-IEGHAQLAAALDTPIATGEMLTSFREH--EQLILGNASDFVQPDAPRVGGISPFLKIMDLA 318 (398)
T ss_dssp HGGGTCSCEECCS-CTTC-HHHHHHHHHHCSSCEEECTTCCSHHHH--HHHHHTTCCSEECCCHHHHTSHHHHHHHHHHH
T ss_pred HHHcCCceeeCCC-Chhh-HHHHHHHHhhCCCCEEecCCcCCHHHH--HHHHHcCCCCEEEeCccccCCHHHHHHHHHHH
Confidence 12444332222 2222 345566777778887643222111111 0010000 01 123344555555
Q ss_pred HHcCCeEEeecCCCChHHH
Q 025860 212 CEVGASLVGGCCRTTPNTI 230 (247)
Q Consensus 212 ~~~G~~iIGGCCGt~P~hI 230 (247)
.+.|+.++.+||+.+--|+
T Consensus 319 ~~~gi~~~~h~~~~~~~~l 337 (398)
T 2pp0_A 319 AKHGRKLAPHFAMEVHLHL 337 (398)
T ss_dssp HHTTCEECCCSCHHHHHHH
T ss_pred HHcCCeEeecCccHHHHHH
Confidence 6789999988887654444
No 364
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=50.14 E-value=1.3e+02 Score=26.22 Aligned_cols=97 Identities=8% Similarity=-0.087 Sum_probs=55.8
Q ss_pred HHHHHhcCCCCEEEEecCC--------------CHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHH
Q 025860 78 RVQVLVESAPDLIAFETIP--------------NKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAE 143 (247)
Q Consensus 78 q~~~l~~~gvD~i~~ET~~--------------~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~ 143 (247)
-++.|.++|++.+-||-.. +..|...-++++++.....+++|.--.+. .. ...++++++...
T Consensus 121 tv~~l~~aGaagv~iED~~~~k~cgH~~gk~L~p~~e~~~rI~Aa~~A~~~~~~~I~ARtda--~a--~~gl~~ai~Ra~ 196 (318)
T 1zlp_A 121 FIRELISAGAKGVFLEDQVWPKKCGHMRGKAVVPAEEHALKIAAAREAIGDSDFFLVARTDA--RA--PHGLEEGIRRAN 196 (318)
T ss_dssp HHHHHHHTTCCEEEEECBCSSCCCSSSSCCCBCCHHHHHHHHHHHHHHHTTSCCEEEEEECT--HH--HHHHHHHHHHHH
T ss_pred HHHHHHHcCCcEEEECCCCCCccccCCCCCccCCHHHHHHHHHHHHHhcccCCcEEEEeeHH--hh--hcCHHHHHHHHH
Confidence 4566677999999999753 34465444555554321234544443321 11 122456665543
Q ss_pred h--CCCCeEEEEcCC-ChhHHHHHHHHHHhhcCCCEEEEeCC
Q 025860 144 S--CKRVVSVGINCT-PPRFISGLILIIKKVTAKPILIYPNS 182 (247)
Q Consensus 144 ~--~~~~~avG~NC~-~p~~~~~~l~~l~~~~~~pl~vyPNa 182 (247)
. ..|+++|=+-|. +++.+ +++.+..+.|+++.+-.
T Consensus 197 Ay~eAGAd~i~~e~~~~~e~~----~~i~~~l~~P~lan~~~ 234 (318)
T 1zlp_A 197 LYKEAGADATFVEAPANVDEL----KEVSAKTKGLRIANMIE 234 (318)
T ss_dssp HHHHTTCSEEEECCCCSHHHH----HHHHHHSCSEEEEEECT
T ss_pred HHHHcCCCEEEEcCCCCHHHH----HHHHHhcCCCEEEEecc
Confidence 1 258999999997 34544 44444557998775543
No 365
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=49.92 E-value=1.3e+02 Score=26.22 Aligned_cols=144 Identities=9% Similarity=-0.041 Sum_probs=77.6
Q ss_pred CHHHHHHHHHHHHHHHhcCCCCEEEEecCC-------CHHHHHHHHHHHHh-hCCCCcEEEEEEEcCCCcccCCCcHHHH
Q 025860 67 TVETLKDFHRRRVQVLVESAPDLIAFETIP-------NKIEAQAYAELLEE-ENIKIPAWFSFNSKDGVNVVSGDSLLEC 138 (247)
Q Consensus 67 s~~e~~~~~~~q~~~l~~~gvD~i~~ET~~-------~~~E~~aa~~~~~~-~~~~~pv~is~~~~~~~~l~~G~~~~~~ 138 (247)
+.+++.+ +++.+.+.|.|.|=+=.-. ++++....++++|+ .+.+.++.+.. + .|-++.++
T Consensus 149 ~~e~~~~----~a~~~~~~Gf~~iKik~g~~~~~~~~~~~~~~e~v~avr~a~g~d~~l~vDa--n------~~~~~~~a 216 (382)
T 1rvk_A 149 TPEDYGR----FAETLVKRGYKGIKLHTWMPPVSWAPDVKMDLKACAAVREAVGPDIRLMIDA--F------HWYSRTDA 216 (382)
T ss_dssp SHHHHHH----HHHHHHHHTCSEEEEECCCTTSTTCCCHHHHHHHHHHHHHHHCTTSEEEEEC--C------TTCCHHHH
T ss_pred CHHHHHH----HHHHHHHCCCCEEEEcCCcCccccccchHHHHHHHHHHHHHhCCCCeEEEEC--C------CCCCHHHH
Confidence 4555443 5555666787777543222 67777888888887 45456666533 2 45567777
Q ss_pred HHHHHh--CCCCeEEEEcCCChhHHHHHHHHHHhhcCCCEEEEeCCCC-cccccccccccCCC-----C------ChHHH
Q 025860 139 ASIAES--CKRVVSVGINCTPPRFISGLILIIKKVTAKPILIYPNSGE-FYDADRKEWVQNTG-----V------SDEDF 204 (247)
Q Consensus 139 ~~~~~~--~~~~~avG~NC~~p~~~~~~l~~l~~~~~~pl~vyPNaG~-~~d~~~~~~~~~~~-----~------~~~~~ 204 (247)
++.++. ..+++.|==-|. ++. ...++.+++..+.||+.==+... ..+.. .+..... . +..++
T Consensus 217 ~~~~~~l~~~~i~~iE~P~~-~~~-~~~~~~l~~~~~iPIa~dE~~~~~~~~~~--~~i~~~~~d~v~ik~~~~GGit~~ 292 (382)
T 1rvk_A 217 LALGRGLEKLGFDWIEEPMD-EQS-LSSYKWLSDNLDIPVVGPESAAGKHWHRA--EWIKAGACDILRTGVNDVGGITPA 292 (382)
T ss_dssp HHHHHHHHTTTCSEEECCSC-TTC-HHHHHHHHHHCSSCEEECSSCSSHHHHHH--HHHHTTCCSEEEECHHHHTSHHHH
T ss_pred HHHHHHHHhcCCCEEeCCCC-hhh-HHHHHHHHhhCCCCEEEeCCccCcHHHHH--HHHHcCCCCEEeeCchhcCCHHHH
Confidence 665532 235554432232 222 34566677777889765332222 21110 1110100 1 23344
Q ss_pred HHHHHHHHHcCCeEEeecCCCC
Q 025860 205 VSYVSKWCEVGASLVGGCCRTT 226 (247)
Q Consensus 205 ~~~~~~~~~~G~~iIGGCCGt~ 226 (247)
.+.+.-..+.|+.+.-||.+++
T Consensus 293 ~~i~~~A~~~g~~~~~~~~~~~ 314 (382)
T 1rvk_A 293 LKTMHLAEAFGMECEVHGNTAM 314 (382)
T ss_dssp HHHHHHHHHTTCCEEECCCSHH
T ss_pred HHHHHHHHHcCCeEeecCCCCH
Confidence 5555555678999988866555
No 366
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=49.79 E-value=1.1e+02 Score=25.12 Aligned_cols=105 Identities=13% Similarity=0.117 Sum_probs=60.1
Q ss_pred HHHHHHhcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEEcCC
Q 025860 77 RRVQVLVESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGINCT 156 (247)
Q Consensus 77 ~q~~~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~NC~ 156 (247)
++++..+++|+|++..=. .+ ..+++.+++. +.|+++.. .++.++.+... .+++.|++==.
T Consensus 80 d~~~~A~~aGAd~v~~p~-~d----~~v~~~ar~~--g~~~i~Gv-----------~t~~e~~~A~~--~Gad~vk~Fpa 139 (224)
T 1vhc_A 80 EQVVLAKSSGADFVVTPG-LN----PKIVKLCQDL--NFPITPGV-----------NNPMAIEIALE--MGISAVKFFPA 139 (224)
T ss_dssp HHHHHHHHHTCSEEECSS-CC----HHHHHHHHHT--TCCEECEE-----------CSHHHHHHHHH--TTCCEEEETTT
T ss_pred HHHHHHHHCCCCEEEECC-CC----HHHHHHHHHh--CCCEEecc-----------CCHHHHHHHHH--CCCCEEEEeeC
Confidence 467777788999996431 11 3344556665 46776531 14677766543 58999999211
Q ss_pred ChhHHHHHHHHHHhhc-CCCEEEEeCCCCcccccccccccCCCCChHHHHHHHHHHHHc-CCeEEeec
Q 025860 157 PPRFISGLILIIKKVT-AKPILIYPNSGEFYDADRKEWVQNTGVSDEDFVSYVSKWCEV-GASLVGGC 222 (247)
Q Consensus 157 ~p~~~~~~l~~l~~~~-~~pl~vyPNaG~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-G~~iIGGC 222 (247)
.+-.-...|+.++... +.|+ .|=+|. ++ +.+.+|++. |+..+||-
T Consensus 140 ~~~gG~~~lk~l~~~~~~ipv--vaiGGI---------------~~----~N~~~~l~agga~~v~gS 186 (224)
T 1vhc_A 140 EASGGVKMIKALLGPYAQLQI--MPTGGI---------------GL----HNIRDYLAIPNIVACGGS 186 (224)
T ss_dssp TTTTHHHHHHHHHTTTTTCEE--EEBSSC---------------CT----TTHHHHHTSTTBCCEEEC
T ss_pred ccccCHHHHHHHHhhCCCCeE--EEECCc---------------CH----HHHHHHHhcCCCEEEEEc
Confidence 1111256777777654 4564 444442 23 234557777 77666643
No 367
>2eq5_A 228AA long hypothetical hydantoin racemase; structural genomics, NPPSFA, national project on P structural and functional analyses; 2.20A {Pyrococcus horikoshii}
Probab=49.78 E-value=64 Score=25.89 Aligned_cols=74 Identities=14% Similarity=0.155 Sum_probs=36.5
Q ss_pred CHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCC--------cHHHHHHHHHhCCCCeEEEEcCCChhHHHHHHHHH
Q 025860 97 NKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGD--------SLLECASIAESCKRVVSVGINCTPPRFISGLILII 168 (247)
Q Consensus 97 ~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~--------~~~~~~~~~~~~~~~~avG~NC~~p~~~~~~l~~l 168 (247)
...|.....+.+++..++..+.. ..+........+. .+.++++.+.. .++++|.+.|... ..+..+
T Consensus 19 ~~~e~~~~~~~~~~~~p~~~i~~-~~~p~g~~~~~~~~~~~~~~~~l~~~~~~l~~-~g~d~iviaCnta----~~~~~l 92 (228)
T 2eq5_A 19 DKEILNLHGRIIESAFPELKVVS-RCIEDQPKGIYNEETEREAEPKIIRLAKEFER-EGVDAIIISCAAD----PAVEKV 92 (228)
T ss_dssp CHHHHTHHHHHHHHHCTTEEEEE-EECSSCTTCCSSHHHHHHHHHHHHHHHHHHHH-TTCSEEEECSTTC----TTHHHH
T ss_pred CHHHHHHHHHHHHhhCCCCeEEE-EeCCCCchhccccccHHHhHHHHHHHHHHHHH-CCCCEEEEeCCch----HHHHHH
Confidence 34555555555555543433333 4444433322221 12234445554 5899999999743 233444
Q ss_pred HhhcCCCE
Q 025860 169 KKVTAKPI 176 (247)
Q Consensus 169 ~~~~~~pl 176 (247)
++..+.|+
T Consensus 93 ~~~~~iPv 100 (228)
T 2eq5_A 93 RKLLSIPV 100 (228)
T ss_dssp HHHCSSCE
T ss_pred HHhCCCCE
Confidence 44445554
No 368
>2egz_A 3-dehydroquinate dehydratase; aquifex aeolicus VF5, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: TLA; 1.75A {Aquifex aeolicus} PDB: 2ysw_A
Probab=49.41 E-value=1.1e+02 Score=25.00 Aligned_cols=99 Identities=10% Similarity=-0.012 Sum_probs=60.4
Q ss_pred HHHHHHHHhcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEEc
Q 025860 75 HRRRVQVLVESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGIN 154 (247)
Q Consensus 75 ~~~q~~~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~N 154 (247)
|.+.++.+++. +|++=+|-.. ....+.+.+.++.. +..+++|+.-.+. +++-+.+.+.++.+.. .|+ .+=+-
T Consensus 73 ~~~ll~~~~~~-~d~iDvEl~~-~~~~~~l~~~~~~~--g~kvI~S~Hdf~~--tp~~~el~~~~~~~~~-~ga-ivKia 144 (219)
T 2egz_A 73 REELFEELSPL-SDYTDIELSS-RGLLVKLYNITKEA--GKKLIISYHNFEL--TPPNWIIREVLREGYR-YGG-IPKIA 144 (219)
T ss_dssp HHHHHHHHTTT-SSEEEEETTC-HHHHHHHHHHHHHT--TCEEEEEEEESSC--CCCHHHHHHHHHHHHH-TTS-EEEEE
T ss_pred HHHHHHHHHhc-CCEEEEEccC-CccHHHHHHHHHHc--CCEEEEEecCCCC--CcCHHHHHHHHHHHHH-cCC-EEEEE
Confidence 33445555666 9999999755 22245566666665 4679999874322 2232334455555555 466 55555
Q ss_pred C--CChhHHHHHHHHHHhhcCCCEEEEeCC
Q 025860 155 C--TPPRFISGLILIIKKVTAKPILIYPNS 182 (247)
Q Consensus 155 C--~~p~~~~~~l~~l~~~~~~pl~vyPNa 182 (247)
+ .+++....+++...+. +.|++++.-+
T Consensus 145 ~~a~~~~D~l~ll~~~~~~-~~P~I~~~MG 173 (219)
T 2egz_A 145 VKANSYEDVARLLCISRQV-EGEKILISMG 173 (219)
T ss_dssp EECSSHHHHHHHHHHHTTS-CSCBEEEEES
T ss_pred EccCCHHHHHHHHHHHHhC-CCCEEEEECC
Confidence 5 3677888888766543 7888776554
No 369
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=49.28 E-value=85 Score=27.78 Aligned_cols=100 Identities=14% Similarity=0.067 Sum_probs=60.1
Q ss_pred HHHHHHHHHHhcCCCCEEEEecCCCHHHHHHHHHH-----------------HHhh-CCCCcEEEEEEEcCCCcccCCCc
Q 025860 73 DFHRRRVQVLVESAPDLIAFETIPNKIEAQAYAEL-----------------LEEE-NIKIPAWFSFNSKDGVNVVSGDS 134 (247)
Q Consensus 73 ~~~~~q~~~l~~~gvD~i~~ET~~~~~E~~aa~~~-----------------~~~~-~~~~pv~is~~~~~~~~l~~G~~ 134 (247)
++|++..+...+.|++++ =|..+...+..+.+. +++. ..++||++|- |. .+=+.
T Consensus 91 e~~~~L~~~~~~~Gi~~~--st~~d~~svd~l~~~~v~~~KI~S~~~~n~~LL~~va~~gkPviLst-----Gm-at~~E 162 (349)
T 2wqp_A 91 EDEIKLKEYVESKGMIFI--STLFSRAAALRLQRMDIPAYKIGSGECNNYPLIKLVASFGKPIILST-----GM-NSIES 162 (349)
T ss_dssp HHHHHHHHHHHHTTCEEE--EEECSHHHHHHHHHHTCSCEEECGGGTTCHHHHHHHHTTCSCEEEEC-----TT-CCHHH
T ss_pred HHHHHHHHHHHHhCCeEE--EeeCCHHHHHHHHhcCCCEEEECcccccCHHHHHHHHhcCCeEEEEC-----CC-CCHHH
Confidence 455666666666777655 466777766655432 2332 1368999875 22 11233
Q ss_pred HHHHHHHHHhCCCCeEEEEcCCC--h---hH-HHHHHHHHHhhc-CCCEEEEeCC
Q 025860 135 LLECASIAESCKRVVSVGINCTP--P---RF-ISGLILIIKKVT-AKPILIYPNS 182 (247)
Q Consensus 135 ~~~~~~~~~~~~~~~avG~NC~~--p---~~-~~~~l~~l~~~~-~~pl~vyPNa 182 (247)
+..+++.+... +...+.+-|+. | +. =+..+..|++.. +.|++ ||.=
T Consensus 163 i~~Ave~i~~~-G~~iiLlhc~s~Yp~~~~~~nL~ai~~lk~~f~~lpVg-~sdH 215 (349)
T 2wqp_A 163 IKKSVEIIREA-GVPYALLHCTNIYPTPYEDVRLGGMNDLSEAFPDAIIG-LSDH 215 (349)
T ss_dssp HHHHHHHHHHH-TCCEEEEECCCCSSCCGGGCCTHHHHHHHHHCTTSEEE-EECC
T ss_pred HHHHHHHHHHc-CCCEEEEeccCCCCCChhhcCHHHHHHHHHHCCCCCEE-eCCC
Confidence 44466666653 34888888963 2 22 256677788877 79985 7763
No 370
>3ixl_A Amdase, arylmalonate decarboxylase; enantioselective decarboxylation, lyase; HET: CME PAC; 1.45A {Bordetella bronchiseptica} PDB: 3ixm_A 2vlb_A 3dg9_A 3ip8_A* 3dtv_A* 3eis_A*
Probab=49.26 E-value=13 Score=31.07 Aligned_cols=44 Identities=20% Similarity=0.348 Sum_probs=30.8
Q ss_pred cHHHHHHHHHhCCCCeEEEEcCCChh------HHHHHHHHHHhhcCCCEEE
Q 025860 134 SLLECASIAESCKRVVSVGINCTPPR------FISGLILIIKKVTAKPILI 178 (247)
Q Consensus 134 ~~~~~~~~~~~~~~~~avG~NC~~p~------~~~~~l~~l~~~~~~pl~v 178 (247)
.+.++++.+.. .++++|.++|+... .-..+.+.+++..+.|++-
T Consensus 54 ~l~~aa~~L~~-ag~d~i~~aCtsas~~~G~~~~~~~~~~l~~~~~iPv~~ 103 (240)
T 3ixl_A 54 SVVDHARRLQK-QGAAVVSLMCTSLSFYRGAAFNAALTVAMREATGLPCTT 103 (240)
T ss_dssp GHHHHHHHHHH-TTEEEEEECCHHHHHTTCHHHHHHHHHHHHHHHSSCEEE
T ss_pred HHHHHHHHhcc-CCCCEEEECCcHHHHhcccchHHHHHHHHHhccCCCEEC
Confidence 45667777776 59999999996422 2235667777777888753
No 371
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=49.17 E-value=1.4e+02 Score=26.25 Aligned_cols=143 Identities=10% Similarity=0.049 Sum_probs=76.0
Q ss_pred CHHHHHHHHHHHHHHHhcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEc-----CCCc---ccCCCcHHHH
Q 025860 67 TVETLKDFHRRRVQVLVESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAWFSFNSK-----DGVN---VVSGDSLLEC 138 (247)
Q Consensus 67 s~~e~~~~~~~q~~~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~-----~~~~---l~~G~~~~~~ 138 (247)
+.+.+.+ ++..+...+..+++.|++-----+.- + .....+...|+...-. ..++ .....+++++
T Consensus 48 ~~~~l~~-~K~lv~~~~~~~asaILlD~~~G~~a----~---~~~~~~~GLii~~E~~G~~~~~~gr~p~~l~~~sve~a 119 (332)
T 3iv3_A 48 TVAQMEE-LKVLVSEELTPYASSILLDPEYGLPA----A---QARDREAGLLLAYEKTGYDANTTSRLPDCLVDWSIKRL 119 (332)
T ss_dssp CHHHHHH-HHHHHHHHHGGGSSEEEECTTTCHHH----H---HTSCTTCEEEEECBCCCCCTTSSCCCCCBCTTCCHHHH
T ss_pred ChHHHHH-HHHHHHHHHhcCCcEEEEchhhCHHH----h---ccccCCCcEEEEeccCCCCcCCCCCCCccccccCHHHH
Confidence 5566666 44456556668899999863222221 1 1222367899988421 1111 1223445544
Q ss_pred HHHHHhCCCCeEEEEcC--CC--h-h---HHHHHHHHHHhh---cCCCEEE----EeCCCCcccccccccccCCCCChHH
Q 025860 139 ASIAESCKRVVSVGINC--TP--P-R---FISGLILIIKKV---TAKPILI----YPNSGEFYDADRKEWVQNTGVSDED 203 (247)
Q Consensus 139 ~~~~~~~~~~~avG~NC--~~--p-~---~~~~~l~~l~~~---~~~pl~v----yPNaG~~~d~~~~~~~~~~~~~~~~ 203 (247)
++ .|+|+|-+-+ .. + + .+...|.++... .+.|+++ ||-.. .+.....+. ...|+.
T Consensus 120 ~~-----~GADAVk~lv~~g~d~~~e~~~~q~~~l~rv~~ec~~~GiPlllEil~y~~~~--~~~~~~~~a---~~~p~~ 189 (332)
T 3iv3_A 120 KE-----AGADAVKFLLYYDVDGDPQVNVQKQAYIERIGSECQAEDIPFFLEILTYDETI--SNNSSVEFA---KVKVHK 189 (332)
T ss_dssp HH-----TTCSEEEEEEEECTTSCHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECBTTB--SCTTSHHHH---TTHHHH
T ss_pred HH-----cCCCEEEEEEEcCCCchHHHHHHHHHHHHHHHHHHHHcCCceEEEEeccCCCC--CCCcchhhh---ccCHHH
Confidence 43 4667655544 32 2 2 345555555433 5899776 55321 011111121 124677
Q ss_pred HHHHHHHH--HHcCCeEEeecCCCCh
Q 025860 204 FVSYVSKW--CEVGASLVGGCCRTTP 227 (247)
Q Consensus 204 ~~~~~~~~--~~~G~~iIGGCCGt~P 227 (247)
....++.+ .+.|+.++===.-.++
T Consensus 190 V~~a~R~~~~~elGaDv~Kve~p~~~ 215 (332)
T 3iv3_A 190 VNDAMKVFSAERFGIDVLKVEVPVNM 215 (332)
T ss_dssp HHHHHHHHTSGGGCCSEEEECCSSCG
T ss_pred HHHHHHHHhhcCcCCcEEEEecCCCh
Confidence 88888999 6779999865444444
No 372
>1i1w_A Endo-1,4-beta-xylanase; xylan degradation, hydrolase, glycosidase, enzyme, ultra HIG resolution, cryo temperature, 1; HET: PCA; 0.89A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1i1x_A* 2bnj_A* 1gok_A 1gom_A 1goo_A 1goq_A* 1gor_A* 1k6a_A 3o2l_A 3nyd_A* 1tux_A 1b31_A 1b30_A 1b3v_A* 1b3w_A* 1b3x_A* 1b3y_A* 1b3z_A* 1bg4_A
Probab=49.11 E-value=39 Score=29.00 Aligned_cols=50 Identities=14% Similarity=0.029 Sum_probs=32.8
Q ss_pred HHHHHHHHHHhcCC--CCEEEEec---CCCHHHHHHHHHHHHhhCCCC-cEEEE-EEEc
Q 025860 73 DFHRRRVQVLVESA--PDLIAFET---IPNKIEAQAYAELLEEENIKI-PAWFS-FNSK 124 (247)
Q Consensus 73 ~~~~~q~~~l~~~g--vD~i~~ET---~~~~~E~~aa~~~~~~~~~~~-pv~is-~~~~ 124 (247)
+.+...++.|.+.| +|.|-++. .....+++..++.+... ++ ||||| +.+.
T Consensus 185 ~~~~~~v~~l~~~G~~iDgiG~Q~H~~~~~~~~~~~~l~~~a~~--G~~pi~iTEldi~ 241 (303)
T 1i1w_A 185 QAIVNRVKKWRAAGVPIDGIGSQTHLSAGQGASVLQALPLLASA--GTPEVAITELDVA 241 (303)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEECCEECTTTHHHHHHHHHHHHTT--CCSEEEEEEEEET
T ss_pred HHHHHHHHHHHHCCCcccEEEeccccCCCCHHHHHHHHHHHHHC--CCCeEEEEeCCcc
Confidence 44555777776777 48887765 34456677777766655 46 88887 5554
No 373
>3qw4_B UMP synthase; N-terminal orotidine monophosphate decarboxylase domain C-TE orotate phosphoribosyltransferase domain, transferase, LYAS; HET: U5P; 3.00A {Leishmania donovani}
Probab=48.70 E-value=1.6e+02 Score=26.86 Aligned_cols=148 Identities=15% Similarity=0.090 Sum_probs=82.1
Q ss_pred HHHHHHHHHHHHHHHhcCCCCEE-----EEecCCCHHHHHHHHHHHHh----hCCCCcEEEEEEEcCCCcccCCCcHHHH
Q 025860 68 VETLKDFHRRRVQVLVESAPDLI-----AFETIPNKIEAQAYAELLEE----ENIKIPAWFSFNSKDGVNVVSGDSLLEC 138 (247)
Q Consensus 68 ~~e~~~~~~~q~~~l~~~gvD~i-----~~ET~~~~~E~~aa~~~~~~----~~~~~pv~is~~~~~~~~l~~G~~~~~~ 138 (247)
.+.+.++-+..++.+.+ -|+++ +||... ...++.+++ ...+.||++-+-+.|- |.+...+
T Consensus 28 ~~~~~~~a~~~v~~~~~-~v~~~Kvg~~lf~~~G-----~~~v~~L~~~~~~~~~g~~VflDlK~~DI-----pnT~~~~ 96 (453)
T 3qw4_B 28 AAAAVEECKRLIEQTHE-YAAAYKPNAAFFEFFG-----AEGWAALSEVIRAVPAGIPVVLDAKRGDI-----ADTADAY 96 (453)
T ss_dssp HHHHHHHHHHHHHHHGG-GCSEEEEBHHHHHTTH-----HHHHHHHHHHHHTSCTTSCBEEEEEECCC-----HHHHHHH
T ss_pred ccHHHHHHHHHHHHhCC-cCcEEEEcHHHHHhcC-----HHHHHHHHHHHHhhcCCCeEEEEeecCCh-----HHHHHHH
Confidence 46677777777777764 35555 334322 222222332 1126899998888664 3445666
Q ss_pred HHHHHhCCCCeEEEEcCC-ChhHHHHHHHHHHhhcCCCEEE---EeCCCCcccccccccccC--CCCC-hHHHHHHHH-H
Q 025860 139 ASIAESCKRVVSVGINCT-PPRFISGLILIIKKVTAKPILI---YPNSGEFYDADRKEWVQN--TGVS-DEDFVSYVS-K 210 (247)
Q Consensus 139 ~~~~~~~~~~~avG~NC~-~p~~~~~~l~~l~~~~~~pl~v---yPNaG~~~d~~~~~~~~~--~~~~-~~~~~~~~~-~ 210 (247)
++.+....+++++-+|.. +.+.|.++++.. +.-+.+ .-|.+. ..++.. ...+ .+...+.++ .
T Consensus 97 a~~~~~~lg~d~vTvh~~~G~~~l~~~~~~~----~~~v~vL~~tS~~~~------~~lq~~~~~~~~~~~~V~~~a~~~ 166 (453)
T 3qw4_B 97 ATSAFKHLNAHAITASPYMGSDSLQPFMRYP----DKAVFVLCKTSNKGS------NDLQCLRVGDRYLYEAVAERAEGP 166 (453)
T ss_dssp HHHHHTTSCCSEEEECSTTCHHHHHHHHTCT----TSEEEEEEECSSGGG------GGTTTSEETTEEHHHHHHHHHTTT
T ss_pred HHHHHHHcCCCEEEEcccCCHHHHHHHHHhh----CCcEEEEEeCCCcch------HHHHhcccCCCCHHHHHHHHHHHH
Confidence 665443368999999997 777777766531 222322 233321 011100 0001 133445555 5
Q ss_pred HHHcCCeEEeecCC-CChHHHHHHHHHhh
Q 025860 211 WCEVGASLVGGCCR-TTPNTIKGIYRTLS 238 (247)
Q Consensus 211 ~~~~G~~iIGGCCG-t~P~hI~al~~~l~ 238 (247)
|.+.|. .|=-|| |.|++++.|++.+.
T Consensus 167 ~~~~g~--~GvV~gat~~~e~~~ir~~~~ 193 (453)
T 3qw4_B 167 WNVNGN--VGLVVGATDPVALARVRARAP 193 (453)
T ss_dssp TCTTSC--EEEEECTTCHHHHHHHHHHCS
T ss_pred HhhcCC--eEEEECCCCHHHHHHHHHhCC
Confidence 655554 666676 67999999998764
No 374
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=48.12 E-value=1.4e+02 Score=26.15 Aligned_cols=152 Identities=11% Similarity=0.067 Sum_probs=80.7
Q ss_pred CHHHHHHHHHHHHHHHhcCCCCEEEEecC------------------CCHHHHHHHHHHHHh-hCCCCcEEEEEEEcCCC
Q 025860 67 TVETLKDFHRRRVQVLVESAPDLIAFETI------------------PNKIEAQAYAELLEE-ENIKIPAWFSFNSKDGV 127 (247)
Q Consensus 67 s~~e~~~~~~~q~~~l~~~gvD~i~~ET~------------------~~~~E~~aa~~~~~~-~~~~~pv~is~~~~~~~ 127 (247)
+.+++. ++++.+.+.|.|.|=+-.- .++++....++++|+ .+.+.++.+.+ +
T Consensus 137 ~~~~~~----~~a~~~~~~Gf~~vKik~g~~~~g~~~~~~~~gg~~~~~~~~~~e~v~avr~a~G~d~~l~vD~--n--- 207 (392)
T 2poz_A 137 TPDEFA----RAVERPLKEGYGALKFYPLAQRVGSALQHVTRRSMSAEAIELAYRRVKAVRDAAGPEIELMVDL--S--- 207 (392)
T ss_dssp SHHHHH----HHTHHHHHTTCSEEEECCCCEEETTEEECCBTTBCCHHHHHHHHHHHHHHHHHHCTTSEEEEEC--T---
T ss_pred CHHHHH----HHHHHHHHcCCCEEEEecccccccccccccccCCcchhhHHHHHHHHHHHHHhcCCCCEEEEEC--C---
Confidence 555543 3566666778777744322 245666677777777 45456666433 2
Q ss_pred cccCCCcHHHHHHHHHhC--CCCeEEEEcCCChhHHHHHHHHHHhhcCCCEEEEeCCCCccccc------ccccc-cC--
Q 025860 128 NVVSGDSLLECASIAESC--KRVVSVGINCTPPRFISGLILIIKKVTAKPILIYPNSGEFYDAD------RKEWV-QN-- 196 (247)
Q Consensus 128 ~l~~G~~~~~~~~~~~~~--~~~~avG~NC~~p~~~~~~l~~l~~~~~~pl~vyPNaG~~~d~~------~~~~~-~~-- 196 (247)
.|-++.++++.++.. .+++.|==-| .++. ...++.+++..+.||+.==+...+.+.. .-+.. .+
T Consensus 208 ---~~~~~~~a~~~~~~l~~~~i~~iE~P~-~~~~-~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~ 282 (392)
T 2poz_A 208 ---GGLTTDETIRFCRKIGELDICFVEEPC-DPFD-NGALKVISEQIPLPIAVGERVYTRFGFRKIFELQACGIIQPDIG 282 (392)
T ss_dssp ---TCSCHHHHHHHHHHHGGGCEEEEECCS-CTTC-HHHHHHHHHHCSSCEEECTTCCHHHHHHHHHTTTCCSEECCCTT
T ss_pred ---CCCCHHHHHHHHHHHHhcCCCEEECCC-Cccc-HHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCCEEecCcc
Confidence 456778877766431 2333332222 2333 4456667777788876422221111100 00111 00
Q ss_pred CCCChHHHHHHHHHHHHcCCeEEeecCCCChHHHHHH
Q 025860 197 TGVSDEDFVSYVSKWCEVGASLVGGCCRTTPNTIKGI 233 (247)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~G~~iIGGCCGt~P~hI~al 233 (247)
..-+..+..+.+.-..+.|+.++-+|++ +|=-+.+.
T Consensus 283 ~~GGit~~~~i~~~A~~~g~~~~~h~~~-s~i~~aa~ 318 (392)
T 2poz_A 283 TAGGLMETKKICAMAEAYNMRVAPHVCG-SSLIETAT 318 (392)
T ss_dssp TSSCHHHHHHHHHHHHTTTCEECCCCCS-SHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHcCCeEecCCCC-CHHHHHHH
Confidence 0013445556556666789999999998 66555443
No 375
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=48.03 E-value=1.3e+02 Score=26.11 Aligned_cols=50 Identities=8% Similarity=-0.046 Sum_probs=36.1
Q ss_pred cHHHHH---HHHHhCCCCeEEEEcCC-ChhHHHHHHHHHHhhc--CCCEEEEeCCCC
Q 025860 134 SLLECA---SIAESCKRVVSVGINCT-PPRFISGLILIIKKVT--AKPILIYPNSGE 184 (247)
Q Consensus 134 ~~~~~~---~~~~~~~~~~avG~NC~-~p~~~~~~l~~l~~~~--~~pl~vyPNaG~ 184 (247)
++++.+ +.+.+ .+.++|-+++. +++...+.++.+++.. +.+|.+-.|.+.
T Consensus 146 ~~~~~~~~a~~~~~-~Gf~~iKik~g~~~~~~~e~v~avr~a~g~~~~l~vDan~~~ 201 (371)
T 2ps2_A 146 EPEDMRARVAKYRA-KGYKGQSVKISGEPVTDAKRITAALANQQPDEFFIVDANGKL 201 (371)
T ss_dssp CHHHHHHHHHHHHT-TTCCEEEEECCSCHHHHHHHHHHHTTTCCTTCEEEEECTTBC
T ss_pred CHHHHHHHHHHHHH-hChheEEeecCCCHHHHHHHHHHHHHhcCCCCEEEEECCCCc
Confidence 444443 33344 58899999997 5677778888888764 678999999874
No 376
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=48.01 E-value=64 Score=27.99 Aligned_cols=62 Identities=3% Similarity=-0.120 Sum_probs=39.9
Q ss_pred CCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEEcCCC---hhH---HHHHHHHHHhhcCCCEEEEeC
Q 025860 114 KIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGINCTP---PRF---ISGLILIIKKVTAKPILIYPN 181 (247)
Q Consensus 114 ~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~NC~~---p~~---~~~~l~~l~~~~~~pl~vyPN 181 (247)
++||.++- +.-.+=+.+..+++++....+-..+.+-|+. +.. =+..+..|++ .+.|+++.|.
T Consensus 155 gkPVilK~-----Gms~t~~ei~~ave~i~~~Gn~~iiL~erg~~y~~~~~~vdl~~i~~lk~-~~~PV~~D~s 222 (298)
T 3fs2_A 155 GRVVNVKK-----GQFLAPWDMKNVLAKITESGNPNVLATERGVSFGYNTLVSDMRALPIMAG-LGAPVIFDAT 222 (298)
T ss_dssp TSEEEEEC-----CTTCCGGGHHHHHHHHHTTTCCCEEEEECCEECSSSCEECCTTHHHHHHT-TTSCEEEEHH
T ss_pred CCcEEEeC-----CCCCCHHHHHHHHHHHHHcCCCeEEEEECCCCCCCCCCccCHHHHHHHHH-cCCcEEEcCC
Confidence 68998764 2211234567788888764455788889962 222 1455667777 7899988654
No 377
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=47.86 E-value=1.1e+02 Score=24.75 Aligned_cols=89 Identities=11% Similarity=-0.024 Sum_probs=48.8
Q ss_pred HHHHHHHhcCCCCEEEEecC-----------C-----------CHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCC
Q 025860 76 RRRVQVLVESAPDLIAFETI-----------P-----------NKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGD 133 (247)
Q Consensus 76 ~~q~~~l~~~gvD~i~~ET~-----------~-----------~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~ 133 (247)
.+.++.+.++ +|.|-+-+- + ++......++.+++.. ++|+.+....+. ....
T Consensus 22 ~~~a~~~~~~-ad~iel~~p~sdp~~DG~~~~~~~~~al~~g~~~~~~~~~i~~i~~~~-~~pv~~~~~~~~--~~~~-- 95 (248)
T 1geq_A 22 LNFLLALDEY-AGAIELGIPFSDPIADGKTIQESHYRALKNGFKLREAFWIVKEFRRHS-STPIVLMTYYNP--IYRA-- 95 (248)
T ss_dssp HHHHHHHGGG-BSCEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTC-CCCEEEEECHHH--HHHH--
T ss_pred HHHHHHHHHc-CCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHhhC-CCCEEEEeccch--hhhc--
Confidence 3477888888 999977721 1 3344455666666653 678775321110 0001
Q ss_pred cHHHHHHHHHhCCCCeEEEEcCCChhHHHHHHHHHHhh
Q 025860 134 SLLECASIAESCKRVVSVGINCTPPRFISGLILIIKKV 171 (247)
Q Consensus 134 ~~~~~~~~~~~~~~~~avG~NC~~p~~~~~~l~~l~~~ 171 (247)
.+.+.++.+.+ .|++.|-+.+..++....+++.+++.
T Consensus 96 ~~~~~~~~~~~-~Gad~v~~~~~~~~~~~~~~~~~~~~ 132 (248)
T 1geq_A 96 GVRNFLAEAKA-SGVDGILVVDLPVFHAKEFTEIAREE 132 (248)
T ss_dssp CHHHHHHHHHH-HTCCEEEETTCCGGGHHHHHHHHHHH
T ss_pred CHHHHHHHHHH-CCCCEEEECCCChhhHHHHHHHHHHh
Confidence 12455555555 46777777665555555555555543
No 378
>3u43_A Colicin-E2 immunity protein; protein-protein complex, DNAse, high affinity, protein bindi; 1.72A {Escherichia coli} PDB: 2no8_A 2wpt_A
Probab=47.42 E-value=16 Score=26.37 Aligned_cols=46 Identities=20% Similarity=0.386 Sum_probs=31.4
Q ss_pred CChhHHHHHHHHHHhhcCCC----EEEEeCCCCcccccccccccCCCCChHHHHHHHHHHHHc
Q 025860 156 TPPRFISGLILIIKKVTAKP----ILIYPNSGEFYDADRKEWVQNTGVSDEDFVSYVSKWCEV 214 (247)
Q Consensus 156 ~~p~~~~~~l~~l~~~~~~p----l~vyPNaG~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (247)
..-+....+|..+.+.+.-| |+.||+.+. ..+|+...+.+++|+..
T Consensus 28 ~~E~e~d~ll~~fe~iteHP~gSDLIfyP~~~~-------------e~SPEgIv~~IKeWRa~ 77 (94)
T 3u43_A 28 ATEEDDNKLVREFERLTEHPDGSDLIYYPRDDR-------------EDSPEGIVKEIKEWRAA 77 (94)
T ss_dssp SSHHHHHHHHHHHHHHHCCTTTTHHHHSCCTTS-------------CSSHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCCccCeeeeCCCCC-------------CCCHHHHHHHHHHHHHH
Confidence 34455677777776665444 667776642 14699999999999853
No 379
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=47.27 E-value=59 Score=27.24 Aligned_cols=90 Identities=16% Similarity=0.075 Sum_probs=48.9
Q ss_pred HHHHHhcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCe-EEEEcC-
Q 025860 78 RVQVLVESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVV-SVGINC- 155 (247)
Q Consensus 78 q~~~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~-avG~NC- 155 (247)
-++.+.++|+|.+++=-++ .+|....++.+++.+ ++.+..+ ...++.+.+........+.. .+.++-
T Consensus 114 ~~~~~~~aGadgii~~d~~-~e~~~~~~~~~~~~g--~~~i~l~--------~p~t~~~~i~~i~~~~~g~v~~~s~~G~ 182 (268)
T 1qop_A 114 FYARCEQVGVDSVLVADVP-VEESAPFRQAALRHN--IAPIFIC--------PPNADDDLLRQVASYGRGYTYLLSRSGV 182 (268)
T ss_dssp HHHHHHHHTCCEEEETTCC-GGGCHHHHHHHHHTT--CEEECEE--------CTTCCHHHHHHHHHHCCSCEEEESSSSC
T ss_pred HHHHHHHcCCCEEEEcCCC-HHHHHHHHHHHHHcC--CcEEEEE--------CCCCCHHHHHHHHhhCCCcEEEEecCCc
Confidence 4455667899977765554 356777778888764 4443222 12344443333333323332 334442
Q ss_pred CC-----hhHHHHHHHHHHhhcCCCEEE
Q 025860 156 TP-----PRFISGLILIIKKVTAKPILI 178 (247)
Q Consensus 156 ~~-----p~~~~~~l~~l~~~~~~pl~v 178 (247)
++ +..+...++.+++..+.|+.+
T Consensus 183 tG~~~~~~~~~~~~i~~lr~~~~~pi~v 210 (268)
T 1qop_A 183 TGAENRGALPLHHLIEKLKEYHAAPALQ 210 (268)
T ss_dssp CCSSSCC--CCHHHHHHHHHTTCCCEEE
T ss_pred CCCccCCCchHHHHHHHHHhccCCcEEE
Confidence 22 233467778888777788765
No 380
>3apt_A Methylenetetrahydrofolate reductase; TIM barrel, oxidoreductase, flavin; HET: FAD; 1.85A {Thermus thermophilus} PDB: 3apy_A* 1v93_A*
Probab=46.98 E-value=1.4e+02 Score=25.69 Aligned_cols=52 Identities=17% Similarity=0.169 Sum_probs=39.8
Q ss_pred CHHHHHHHHHHHHHHHhcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEE
Q 025860 67 TVETLKDFHRRRVQVLVESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAWFSFN 122 (247)
Q Consensus 67 s~~e~~~~~~~q~~~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~ 122 (247)
+.+.-.++.++.+ ++|+|+|+=--+.+.+-....++.+++.+.++||+..+.
T Consensus 158 ~~~~d~~~Lk~Kv----~aGAdf~iTQ~ffD~~~~~~f~~~~r~~Gi~vPIi~GIm 209 (310)
T 3apt_A 158 SLEADLRHFKAKV----EAGLDFAITQLFFNNAHYFGFLERARRAGIGIPILPGIM 209 (310)
T ss_dssp CHHHHHHHHHHHH----HHHCSEEEECCCSCHHHHHHHHHHHHHTTCCSCEECEEC
T ss_pred CHHHHHHHHHHHH----HcCCCEEEecccCCHHHHHHHHHHHHHcCCCCeEEEEec
Confidence 4443334344443 489999998888999999999998988877899999886
No 381
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=46.94 E-value=31 Score=28.35 Aligned_cols=41 Identities=12% Similarity=0.035 Sum_probs=24.1
Q ss_pred HHHHHhcCCCCEEEEecC--CCHHHHHHHHHHHHhhCCCCcEEEEE
Q 025860 78 RVQVLVESAPDLIAFETI--PNKIEAQAYAELLEEENIKIPAWFSF 121 (247)
Q Consensus 78 q~~~l~~~gvD~i~~ET~--~~~~E~~aa~~~~~~~~~~~pv~is~ 121 (247)
.++.+.++|+|.+.+=-- +. .+....++.+++. ++.+.+++
T Consensus 77 ~i~~~~~aGadgv~vh~e~~~~-~~~~~~~~~i~~~--g~~~gv~~ 119 (230)
T 1tqj_A 77 YVEDFAKAGADIISVHVEHNAS-PHLHRTLCQIREL--GKKAGAVL 119 (230)
T ss_dssp THHHHHHHTCSEEEEECSTTTC-TTHHHHHHHHHHT--TCEEEEEE
T ss_pred HHHHHHHcCCCEEEECcccccc-hhHHHHHHHHHHc--CCcEEEEE
Confidence 355667788998854322 22 3455666666765 45566555
No 382
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=46.82 E-value=83 Score=27.05 Aligned_cols=16 Identities=19% Similarity=0.194 Sum_probs=11.9
Q ss_pred HHHHHHcCCeEEeecC
Q 025860 208 VSKWCEVGASLVGGCC 223 (247)
Q Consensus 208 ~~~~~~~G~~iIGGCC 223 (247)
.+..+..|++.+||--
T Consensus 286 ~~~~l~~Gan~~~~~~ 301 (350)
T 3t7v_A 286 MVLRLNAGANIVTSIL 301 (350)
T ss_dssp HHHHHHTTCCEEEEEC
T ss_pred HHHHHhcCCceecCCC
Confidence 3445678999999863
No 383
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=46.58 E-value=59 Score=29.33 Aligned_cols=12 Identities=8% Similarity=0.371 Sum_probs=5.6
Q ss_pred CChHHHHHHHHH
Q 025860 225 TTPNTIKGIYRT 236 (247)
Q Consensus 225 t~P~hI~al~~~ 236 (247)
++-..|++|++.
T Consensus 359 ~G~~~i~el~~~ 370 (400)
T 3ffs_A 359 LGSASIEELWKK 370 (400)
T ss_dssp TTCSSHHHHHHH
T ss_pred cCcccHHHHHhC
Confidence 334445555543
No 384
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=46.51 E-value=1.7e+02 Score=28.16 Aligned_cols=110 Identities=13% Similarity=0.078 Sum_probs=64.2
Q ss_pred CCHHH---HHHHHHHHHHHHhcCCCCEEEEecCC---------------------C-HHH---HHHHHHHHHh-hCCCCc
Q 025860 66 ITVET---LKDFHRRRVQVLVESAPDLIAFETIP---------------------N-KIE---AQAYAELLEE-ENIKIP 116 (247)
Q Consensus 66 ~s~~e---~~~~~~~q~~~l~~~gvD~i~~ET~~---------------------~-~~E---~~aa~~~~~~-~~~~~p 116 (247)
+|.+| +.+.|.+-++.+.++|.|.|=+=--. + ... +..+++++++ .+.+.|
T Consensus 139 ~t~~eI~~~i~~f~~aA~~a~~aGfDgVEih~a~gyLl~qFlsp~~N~R~D~yGGs~enR~r~~~eiv~avr~~vg~~~p 218 (729)
T 1o94_A 139 MDLSDIAQVQQFYVDAAKRSRDAGFDIVYVYGAHSYLPLQFLNPYYNKRTDKYGGSLENRARFWLETLEKVKHAVGSDCA 218 (729)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTTSE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHhcCCccCCCcCcCCCCHHHHhHHHHHHHHHHHHHhCCCce
Confidence 45554 55678888888888999998543211 1 122 3344555555 355789
Q ss_pred EEEEEEEcCCCcccCCC----cHHHHHHHHHhCCCCeEEEEcCCC---------hh------HHHHHHHHHHhhcCCCEE
Q 025860 117 AWFSFNSKDGVNVVSGD----SLLECASIAESCKRVVSVGINCTP---------PR------FISGLILIIKKVTAKPIL 177 (247)
Q Consensus 117 v~is~~~~~~~~l~~G~----~~~~~~~~~~~~~~~~avG~NC~~---------p~------~~~~~l~~l~~~~~~pl~ 177 (247)
|++-++..+... ..|. ...+.++.+.+ +++.+.+...+ |. ....+++.+++..+.|++
T Consensus 219 v~vrls~~~~~~-~~G~~~~~~~~~~~~~l~~--~~d~~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pvi 295 (729)
T 1o94_A 219 IATRFGVDTVYG-PGQIEAEVDGQKFVEMADS--LVDMWDITIGDIAEWGEDAGPSRFYQQGHTIPWVKLVKQVSKKPVL 295 (729)
T ss_dssp EEEEEEEECSSC-TTSCCTTTHHHHHHHHHGG--GCSEEEEEECCSTTGGGTSCCTTTCCTTTTHHHHHHHHTTCSSCEE
T ss_pred EEEEEccccCcC-CCCCCchHHHHHHHHHHHh--hcCEEEEeeecccccccccCCccccCccccHHHHHHHHHHCCCEEE
Confidence 999998753210 1132 33445555554 47777665531 11 125677788888889965
Q ss_pred E
Q 025860 178 I 178 (247)
Q Consensus 178 v 178 (247)
+
T Consensus 296 ~ 296 (729)
T 1o94_A 296 G 296 (729)
T ss_dssp C
T ss_pred E
Confidence 3
No 385
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=46.22 E-value=74 Score=29.93 Aligned_cols=66 Identities=11% Similarity=0.061 Sum_probs=44.7
Q ss_pred HHHHHHHHHHhcCCCCEEEEe-cC--CCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHH
Q 025860 73 DFHRRRVQVLVESAPDLIAFE-TI--PNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAE 143 (247)
Q Consensus 73 ~~~~~q~~~l~~~gvD~i~~E-T~--~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~ 143 (247)
+++.+.++.+.+.|+|.|.+= |. ..+.++...++.+++.-+ -.+.+++.+.++ .|..++.++..+.
T Consensus 175 e~~~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p-~~i~I~~H~Hnd----~GlAvAN~laAve 243 (539)
T 1rqb_A 175 EGYVKLAGQLLDMGADSIALKDMAALLKPQPAYDIIKAIKDTYG-QKTQINLHCHST----TGVTEVSLMKAIE 243 (539)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEETTCCCCHHHHHHHHHHHHHHHC-TTCCEEEEEBCT----TSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEeCCCCCCcCHHHHHHHHHHHHHhcC-CCceEEEEeCCC----CChHHHHHHHHHH
Confidence 456668888889999988654 53 457888889998887421 135567777664 3555555555443
No 386
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=45.55 E-value=76 Score=22.25 Aligned_cols=73 Identities=12% Similarity=0.015 Sum_probs=32.5
Q ss_pred CCCEEEEecC-CCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEEcCCChhHHHHH
Q 025860 86 APDLIAFETI-PNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGINCTPPRFISGL 164 (247)
Q Consensus 86 gvD~i~~ET~-~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~NC~~p~~~~~~ 164 (247)
..|+++++.. +.. ....+++.+++..+..|+++- + +-.+.....+.+. .|++.+-.-=..++.+...
T Consensus 51 ~~dlvi~d~~l~~~-~g~~~~~~l~~~~~~~~ii~~-s--------~~~~~~~~~~~~~--~g~~~~l~kP~~~~~l~~~ 118 (137)
T 3hdg_A 51 APDVIITDIRMPKL-GGLEMLDRIKAGGAKPYVIVI-S--------AFSEMKYFIKAIE--LGVHLFLPKPIEPGRLMET 118 (137)
T ss_dssp CCSEEEECSSCSSS-CHHHHHHHHHHTTCCCEEEEC-C--------CCCCHHHHHHHHH--HCCSEECCSSCCHHHHHHH
T ss_pred CCCEEEEeCCCCCC-CHHHHHHHHHhcCCCCcEEEE-e--------cCcChHHHHHHHh--CCcceeEcCCCCHHHHHHH
Confidence 4677777743 332 233344445554434554422 1 1122233333333 2455543333345555555
Q ss_pred HHHHHh
Q 025860 165 ILIIKK 170 (247)
Q Consensus 165 l~~l~~ 170 (247)
|+.+.+
T Consensus 119 i~~~~~ 124 (137)
T 3hdg_A 119 LEDFRH 124 (137)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 555443
No 387
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=45.31 E-value=1e+02 Score=27.28 Aligned_cols=111 Identities=5% Similarity=0.019 Sum_probs=62.6
Q ss_pred CCCHHHHH----HHHHHHHHHHh-cCCCCEEEEecC-----------------C------CH-HHHH---HHHHHHHhh-
Q 025860 65 AITVETLK----DFHRRRVQVLV-ESAPDLIAFETI-----------------P------NK-IEAQ---AYAELLEEE- 111 (247)
Q Consensus 65 ~~s~~e~~----~~~~~q~~~l~-~~gvD~i~~ET~-----------------~------~~-~E~~---aa~~~~~~~- 111 (247)
++|.+|+. +.|.+.++.+. ++|.|.|=+=-- . ++ ..++ .+++++++.
T Consensus 162 ~lt~~eI~~~~i~~f~~AA~~a~~~aGfDgVEih~a~GYLl~QFlsp~~N~R~~D~yGG~slenR~r~~~eiv~aVr~av 241 (379)
T 3aty_A 162 ELTDDEVRDGIIPLFVEGAKNAIFKAGFDGVEIHGANGYLLDAFFRESSNKRQSGPYAGTTIDTRCQLIYDVTKSVCDAV 241 (379)
T ss_dssp ECCHHHHHHTHHHHHHHHHHHHHHTSCCSEEEEEECTTSHHHHHHSTTTCCCCSSTTCTTSHHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEcCcCchHHhhccCCCCCccccCCCCccChhhhHHHHHHHHHHHHHhc
Confidence 35666655 57777788888 899999854211 1 22 2333 344555553
Q ss_pred CCCCcEEEEEEEcCCC-cccCCCcHHHHH---HHHHhCCCCeEEEEcCCC---hhHHHHHHHHHHhhcCCCEEE
Q 025860 112 NIKIPAWFSFNSKDGV-NVVSGDSLLECA---SIAESCKRVVSVGINCTP---PRFISGLILIIKKVTAKPILI 178 (247)
Q Consensus 112 ~~~~pv~is~~~~~~~-~l~~G~~~~~~~---~~~~~~~~~~avG~NC~~---p~~~~~~l~~l~~~~~~pl~v 178 (247)
+ +.||.+-++..+.. ...+|.++++++ +.+.+ .+++.|-+-+.. +..-.. ++.+++..+.||++
T Consensus 242 g-~~~v~vRis~~~~~~~~~~~~~~~~~~~la~~l~~-~Gvd~i~v~~~~~~~~~~~~~-~~~ir~~~~iPvi~ 312 (379)
T 3aty_A 242 G-SDRVGLRISPLNGVHGMIDSNPEALTKHLCKKIEP-LSLAYLHYLRGDMVNQQIGDV-VAWVRGSYSGVKIS 312 (379)
T ss_dssp C-GGGEEEEECTTCCGGGCCCSCHHHHHHHHHHHHGG-GCCSEEEEECSCTTSCCCCCH-HHHHHTTCCSCEEE
T ss_pred C-CCeEEEEECcccccccCCCCCCHHHHHHHHHHHHH-hCCCEEEEcCCCcCCCCccHH-HHHHHHHCCCcEEE
Confidence 3 23776666543311 123466666554 44444 578888776632 100014 67778778888654
No 388
>3emz_A Xylanase, endo-1,4-beta-xylanase; (alpha/beta)8 barrel, GH10 enzyme complex, hydrolase; HET: HXH; 2.08A {Bacillus SP} SCOP: c.1.8.3 PDB: 3emq_A* 3emc_A*
Probab=45.29 E-value=36 Score=29.82 Aligned_cols=47 Identities=13% Similarity=0.040 Sum_probs=36.5
Q ss_pred HHHHHHHHHHhcCC--CCEEEEec-----CCCHHHHHHHHHHHHhhCCCCcEEEEE
Q 025860 73 DFHRRRVQVLVESA--PDLIAFET-----IPNKIEAQAYAELLEEENIKIPAWFSF 121 (247)
Q Consensus 73 ~~~~~q~~~l~~~g--vD~i~~ET-----~~~~~E~~aa~~~~~~~~~~~pv~is~ 121 (247)
+.+..+++.|.+.| +|.|-+.. .++..+++.+++.+... ++||+||=
T Consensus 187 ~~~~~~v~~l~~~GvpidgiG~Q~H~~~~~p~~~~~~~~l~~~a~l--Gl~v~iTE 240 (331)
T 3emz_A 187 EKIYNLVRSLLDQGAPVHGIGMQGHWNIHGPSMDEIRQAIERYASL--DVQLHVTE 240 (331)
T ss_dssp HHHHHHHHHHHHHTCCCCEEEECCEEETTBSCHHHHHHHHHHHHTT--SCEEEEEE
T ss_pred HHHHHHHHHHHHCCCccceEEECceecCCCCCHHHHHHHHHHHHHc--CCcEEEee
Confidence 45566888888877 69998774 36788999999988877 58998874
No 389
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=45.22 E-value=72 Score=26.18 Aligned_cols=105 Identities=10% Similarity=-0.006 Sum_probs=57.6
Q ss_pred HHHHHHHHHHHHHHhcCCCCEEEEecCC--------CHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHH
Q 025860 69 ETLKDFHRRRVQVLVESAPDLIAFETIP--------NKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECAS 140 (247)
Q Consensus 69 ~e~~~~~~~q~~~l~~~gvD~i~~ET~~--------~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~ 140 (247)
+.+.+.+++.++.+.+.||. |.+|+.+ +..++.. .+++.+ .-.+- +.++-......|.++.+.++
T Consensus 128 ~~~~~~l~~l~~~a~~~Gv~-l~lEn~~~~~~~~~~~~~~~~~---l~~~v~-~~~vg--~~~D~~h~~~~g~d~~~~l~ 200 (294)
T 3vni_A 128 ERSVESVREVAKVAEACGVD-FCLEVLNRFENYLINTAQEGVD---FVKQVD-HNNVK--VMLDTFHMNIEEDSIGGAIR 200 (294)
T ss_dssp HHHHHHHHHHHHHHHHTTCE-EEEECCCTTTCSSCCSHHHHHH---HHHHHC-CTTEE--EEEEHHHHHHHCSCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCE-EEEEecCcccCcccCCHHHHHH---HHHHcC-CCCEE--EEEEhhhhHHcCCCHHHHHH
Confidence 44555666666666678996 6679874 4455554 444443 12233 33333333446788888888
Q ss_pred HHHhCCCCeEEEEcCC-------ChhHHHHHHHHHHhh-cCCCEEEEeCC
Q 025860 141 IAESCKRVVSVGINCT-------PPRFISGLILIIKKV-TAKPILIYPNS 182 (247)
Q Consensus 141 ~~~~~~~~~avG~NC~-------~p~~~~~~l~~l~~~-~~~pl~vyPNa 182 (247)
.+.+ .+..|=++=. +.-....+++.+++. .+.++++-+..
T Consensus 201 ~~~~--~i~~vHl~D~~r~~pG~G~id~~~~~~~L~~~gy~g~~~lE~~~ 248 (294)
T 3vni_A 201 TAGS--YLGHLHTGECNRKVPGRGRIPWVEIGEALADIGYNGSVVMEPFV 248 (294)
T ss_dssp HHGG--GEEEEEECCTTSCCTTSSSCCHHHHHHHHHHTTCCSCEEECCCC
T ss_pred Hhhh--hEeEEEeCCCCCCCCCCCCcCHHHHHHHHHHhCCCCcEEEEecc
Confidence 7743 2333333221 122356667766654 35677776554
No 390
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=44.89 E-value=1.6e+02 Score=25.67 Aligned_cols=144 Identities=17% Similarity=0.163 Sum_probs=75.8
Q ss_pred EEEEecCCcc---cCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCEEE--Eec-CCCHHH------HHHHHHH
Q 025860 40 LVAASVGSYG---AYLADGSEYSGNYGDAITVETLKDFHRRRVQVLVESAPDLIA--FET-IPNKIE------AQAYAEL 107 (247)
Q Consensus 40 ~VaGsiGP~g---~~l~~g~eY~g~y~~~~s~~e~~~~~~~q~~~l~~~gvD~i~--~ET-~~~~~E------~~aa~~~ 107 (247)
.|.||++|-| +.+++-+.+++ .+.|++.. .|+|.+- +=. +.+..| +..+.+.
T Consensus 108 tv~gs~~~ggl~g~~~~~d~~~~~-----~sVe~Avr-----------lGADaV~~l~~i~~Gs~~e~~~l~~la~vv~e 171 (307)
T 3fok_A 108 IVVGSMNRGGLRGASFEMDDRYTG-----YNVSSMVD-----------RGVDFAKTLVRINLSDAGTAPTLEATAHAVNE 171 (307)
T ss_dssp EEEEECCCCSCTTCTTTTSCCCCS-----CCHHHHHH-----------HTCCEEEEEEEECTTCTTHHHHHHHHHHHHHH
T ss_pred ccccccCccccccCCCCccccccc-----cCHHHHHH-----------CCCCEEEEEEEECCCChhHHHHHHHHHHHHHH
Confidence 4679999953 33332222222 24444333 4888854 221 223233 3333334
Q ss_pred HHhhCCCCcEEEE-EEEcC-CCcccCCCc---HHHHHHHHHhCCCCe----EEEEcCCChhHHHHHHHHHHhhcCCCEEE
Q 025860 108 LEEENIKIPAWFS-FNSKD-GVNVVSGDS---LLECASIAESCKRVV----SVGINCTPPRFISGLILIIKKVTAKPILI 178 (247)
Q Consensus 108 ~~~~~~~~pv~is-~~~~~-~~~l~~G~~---~~~~~~~~~~~~~~~----avG~NC~~p~~~~~~l~~l~~~~~~pl~v 178 (247)
+.+. ++|+++- |.... ++...+-.+ +..+++...+ .|++ .|=++.+ +. ++++-+....|+++
T Consensus 172 a~~~--GlP~~~ep~~y~r~gg~v~~~~dp~~Va~aaRiAaE-LGADs~~tivK~~y~--e~----f~~Vv~a~~vPVVi 242 (307)
T 3fok_A 172 AAAA--QLPIMLEPFMSNWVNGKVVNDLSTDAVIQSVAIAAG-LGNDSSYTWMKLPVV--EE----MERVMESTTMPTLL 242 (307)
T ss_dssp HHHT--TCCEEEEEEEEEEETTEEEECCSHHHHHHHHHHHHT-CSSCCSSEEEEEECC--TT----HHHHGGGCSSCEEE
T ss_pred HHHc--CCcEEEEeeccccCCCCcCCCCCHHHHHHHHHHHHH-hCCCcCCCEEEeCCc--HH----HHHHHHhCCCCEEE
Confidence 4444 6898885 33322 343322233 4445554444 6899 9999988 33 34444556788766
Q ss_pred EeCCCCcccccccccccCCCCChHHHHHHHHHHHH-cCCeEEeecCC
Q 025860 179 YPNSGEFYDADRKEWVQNTGVSDEDFVSYVSKWCE-VGASLVGGCCR 224 (247)
Q Consensus 179 yPNaG~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~G~~iIGGCCG 224 (247)
- +|..- .++++|.+.++..++ .|+ -|=+-|
T Consensus 243 a--GG~k~------------~~~~e~L~~v~~A~~~aGa--~Gv~vG 273 (307)
T 3fok_A 243 L--GGEGG------------NDPDATFASWEHALTLPGV--RGLTVG 273 (307)
T ss_dssp E--CCSCC--------------CHHHHHHHHHHTTSTTE--EEEEEC
T ss_pred e--CCCCC------------CCHHHHHHHHHHHHHhCCC--eEEeec
Confidence 5 33210 135778888888888 676 344444
No 391
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=44.74 E-value=65 Score=26.07 Aligned_cols=85 Identities=13% Similarity=0.044 Sum_probs=43.6
Q ss_pred HHHHhcCCCCEEEE--ecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCC--CCeEEEEc
Q 025860 79 VQVLVESAPDLIAF--ETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCK--RVVSVGIN 154 (247)
Q Consensus 79 ~~~l~~~gvD~i~~--ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~--~~~avG~N 154 (247)
++.+.+.|+|.+.+ |..... +...++.+++. ++++++++ .+ .++++ .++.+.+ . +++.|++-
T Consensus 80 i~~~~~agad~v~vH~~~~~~~--~~~~~~~i~~~--g~~igv~~--~p------~t~~e-~~~~~~~-~~~~~d~vl~~ 145 (228)
T 1h1y_A 80 VEPLAKAGASGFTFHIEVSRDN--WQELIQSIKAK--GMRPGVSL--RP------GTPVE-EVFPLVE-AENPVELVLVM 145 (228)
T ss_dssp HHHHHHHTCSEEEEEGGGCTTT--HHHHHHHHHHT--TCEEEEEE--CT------TSCGG-GGHHHHH-SSSCCSEEEEE
T ss_pred HHHHHHcCCCEEEECCCCcccH--HHHHHHHHHHc--CCCEEEEE--eC------CCCHH-HHHHHHh-cCCCCCEEEEE
Confidence 55556678999844 433322 14455556655 46777655 21 22332 2333332 2 46777663
Q ss_pred C---C--C---hhHHHHHHHHHHhhc-CCCEE
Q 025860 155 C---T--P---PRFISGLILIIKKVT-AKPIL 177 (247)
Q Consensus 155 C---~--~---p~~~~~~l~~l~~~~-~~pl~ 177 (247)
. + + +....+.++++++.. +.|+.
T Consensus 146 sv~pg~~g~~~~~~~l~~i~~~~~~~~~~pi~ 177 (228)
T 1h1y_A 146 TVEPGFGGQKFMPEMMEKVRALRKKYPSLDIE 177 (228)
T ss_dssp SSCTTCSSCCCCGGGHHHHHHHHHHCTTSEEE
T ss_pred eecCCCCcccCCHHHHHHHHHHHHhcCCCCEE
Confidence 2 2 1 234455667777665 55643
No 392
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=44.64 E-value=21 Score=30.12 Aligned_cols=74 Identities=12% Similarity=0.013 Sum_probs=44.8
Q ss_pred HHHHHhcCCCCEEEEecCC--CHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEEcC
Q 025860 78 RVQVLVESAPDLIAFETIP--NKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGINC 155 (247)
Q Consensus 78 q~~~l~~~gvD~i~~ET~~--~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~NC 155 (247)
.++.+.+.|+|.+.+.-+. +.+-++. ..++. .+|+++. .+. ++ . ++-+.+ .+++-|-+|+
T Consensus 43 ~A~~~~~~Ga~~l~vvDL~~~n~~~i~~---i~~~~--~~pv~vg-----GGi-r~---~-~~~~~l---~Ga~~Viigs 104 (260)
T 2agk_A 43 YAKLYKDRDVQGCHVIKLGPNNDDAARE---ALQES--PQFLQVG-----GGI-ND---T-NCLEWL---KWASKVIVTS 104 (260)
T ss_dssp HHHHHHHTTCTTCEEEEESSSCHHHHHH---HHHHS--TTTSEEE-----SSC-CT---T-THHHHT---TTCSCEEECG
T ss_pred HHHHHHHcCCCEEEEEeCCCCCHHHHHH---HHhcC--CceEEEe-----CCC-CH---H-HHHHHh---cCCCEEEECc
Confidence 3444455789888887666 5443333 33433 5888841 222 11 1 444444 3788888888
Q ss_pred C---C-----hhHHHHHHHHHH
Q 025860 156 T---P-----PRFISGLILIIK 169 (247)
Q Consensus 156 ~---~-----p~~~~~~l~~l~ 169 (247)
. . |+.+.++++.+.
T Consensus 105 ~a~~~~g~~~p~~~~~~~~~~g 126 (260)
T 2agk_A 105 WLFTKEGHFQLKRLERLTELCG 126 (260)
T ss_dssp GGBCTTCCBCHHHHHHHHHHHC
T ss_pred HHHhhcCCCCHHHHHHHHHHhC
Confidence 5 6 888888888775
No 393
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=44.43 E-value=49 Score=29.15 Aligned_cols=15 Identities=33% Similarity=0.445 Sum_probs=9.0
Q ss_pred HHHHHhcCCCCEEEE
Q 025860 78 RVQVLVESAPDLIAF 92 (247)
Q Consensus 78 q~~~l~~~gvD~i~~ 92 (247)
.++.+.++|||+|.+
T Consensus 174 ~A~~a~~aGaD~I~v 188 (351)
T 2c6q_A 174 MVEELILSGADIIKV 188 (351)
T ss_dssp HHHHHHHTTCSEEEE
T ss_pred HHHHHHHhCCCEEEE
Confidence 344455677777755
No 394
>4djd_C C/Fe-SP, corrinoid/iron-sulfur protein large subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_C* 4djf_C*
Probab=44.10 E-value=1e+02 Score=28.29 Aligned_cols=83 Identities=12% Similarity=0.086 Sum_probs=50.7
Q ss_pred CCCCEEEEecC-CCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEEcCCChhHHHH
Q 025860 85 SAPDLIAFETI-PNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGINCTPPRFISG 163 (247)
Q Consensus 85 ~gvD~i~~ET~-~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~NC~~p~~~~~ 163 (247)
-++|+|.+.-. .+.+++..+++.+++.- ++|+.+- . .+-+.++++++...+ ..++..+++=-..+.|.+
T Consensus 126 ~~~D~ial~~~s~dpe~~~~vVk~V~e~~-dvPL~ID--S------~dpevleaALea~a~-~~plI~sat~dn~e~m~~ 195 (446)
T 4djd_C 126 YTIQAIAIRHDADDPAAFKAAVASVAAAT-QLNLVLM--A------DDPDVLKEALAGVAD-RKPLLYAATGANYEAMTA 195 (446)
T ss_dssp ECCCEEEEECCSSSTHHHHHHHHHHHTTC-CSEEEEE--C------SCHHHHHHHHGGGGG-GCCEEEEECTTTHHHHHH
T ss_pred ccCcEEEEEeCCCCHHHHHHHHHHHHHhC-CCCEEEe--c------CCHHHHHHHHHhhcC-cCCeeEecchhhHHHHHH
Confidence 47999999876 56788888898888753 6775432 2 133344455554433 356766666222334444
Q ss_pred HHHHHHhhcCCCEEEEeC
Q 025860 164 LILIIKKVTAKPILIYPN 181 (247)
Q Consensus 164 ~l~~l~~~~~~pl~vyPN 181 (247)
+.. ..+.|+++..|
T Consensus 196 lAa----~y~~pVi~~~~ 209 (446)
T 4djd_C 196 LAK----ENNCPLAVYGN 209 (446)
T ss_dssp HHH----HTTCCEEEECS
T ss_pred HHH----HcCCcEEEEec
Confidence 432 24788888876
No 395
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=44.03 E-value=1.8e+02 Score=26.27 Aligned_cols=121 Identities=20% Similarity=0.115 Sum_probs=0.0
Q ss_pred HHHHhcCCCCEEEEecCCC---------------HHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHH
Q 025860 79 VQVLVESAPDLIAFETIPN---------------KIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAE 143 (247)
Q Consensus 79 ~~~l~~~gvD~i~~ET~~~---------------~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~ 143 (247)
++..+++|+|.+-+=.=.| ++.+..+++.+++. +..|.++.. +..-.+=+-+.++++.+.
T Consensus 116 i~~A~~aG~~~V~i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~--G~~V~~~~e---da~r~d~~~~~~v~~~~~ 190 (423)
T 3ivs_A 116 ARVAVETGVDGVDVVIGTSQYLRKYSHGKDMTYIIDSATEVINFVKSK--GIEVRFSSE---DSFRSDLVDLLSLYKAVD 190 (423)
T ss_dssp HHHHHHTTCSEEEEEEEC-------------CHHHHHHHHHHHHHHTT--TCEEEEEEE---SGGGSCHHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEEeeccHHHHHHHcCCCHHHHHHHHHHHHHHHHHC--CCEEEEEEc---cCcCCCHHHHHHHHHHHH
Q ss_pred hCCCCeEEEEcCC-C---hhHHHHHHHHHHhhcCCCEEEEeCCCCcccccccccccCCCCChHHHHHHHHHHHHcCCeEE
Q 025860 144 SCKRVVSVGINCT-P---PRFISGLILIIKKVTAKPILIYPNSGEFYDADRKEWVQNTGVSDEDFVSYVSKWCEVGASLV 219 (247)
Q Consensus 144 ~~~~~~avG~NC~-~---p~~~~~~l~~l~~~~~~pl~vyPNaG~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~iI 219 (247)
+ .+++.|.+-=+ + |..+..+++.+++..+.||.+.... +..--...+...+++|++.|
T Consensus 191 ~-~Ga~~i~l~DTvG~~~P~~v~~lv~~l~~~~~~~i~~H~Hn-----------------d~GlAvAN~laAv~aGa~~v 252 (423)
T 3ivs_A 191 K-IGVNRVGIADTVGCATPRQVYDLIRTLRGVVSCDIECHFHN-----------------DTGMAIANAYCALEAGATHI 252 (423)
T ss_dssp H-HCCSEEEEEETTSCCCHHHHHHHHHHHHHHCSSEEEEEEBC-----------------TTSCHHHHHHHHHHTTCCEE
T ss_pred H-hCCCccccCCccCcCCHHHHHHHHHHHHhhcCCeEEEEECC-----------------CCchHHHHHHHHHHhCCCEE
Q ss_pred eec
Q 025860 220 GGC 222 (247)
Q Consensus 220 GGC 222 (247)
=||
T Consensus 253 d~t 255 (423)
T 3ivs_A 253 DTS 255 (423)
T ss_dssp EEB
T ss_pred EEe
No 396
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=43.92 E-value=35 Score=31.65 Aligned_cols=96 Identities=16% Similarity=0.062 Sum_probs=56.3
Q ss_pred HHHHHhcCCCCEEEEecCCCHHHHHHHHHHHHh-hCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEEcCC
Q 025860 78 RVQVLVESAPDLIAFETIPNKIEAQAYAELLEE-ENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGINCT 156 (247)
Q Consensus 78 q~~~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~-~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~NC~ 156 (247)
.++..++.|+|+|=+|--. ..+. ++.+.+ .+.+..+++|+.-.+. +++-+.+.+.++.+.. .++|.+=+-+.
T Consensus 84 ll~~~~~~~~~yiDvEl~~-~~~~---~~~~~~~~~~~~kiI~S~H~f~~--tp~~~~~~~~~~~~~~-~gaDivKia~~ 156 (523)
T 2o7s_A 84 VLRLAMELGADYIDVELQV-ASEF---IKSIDGKKPGKFKVIVSSHNYQN--TPSVEDLDGLVARIQQ-TGADIVKIATT 156 (523)
T ss_dssp HHHHHHHHTCSEEEEEHHH-HHHH---HHHTTTCCCTTCEEEEEEECSSC--CCCHHHHHHHHHHHHT-TTCSEEEEEEE
T ss_pred HHHHHHHhCCCEEEEECCC-chHH---HHHHHHhccCCCEEEEEcccCCC--CcCHHHHHHHHHHHHH-hCCCEEEEEec
Confidence 3444455689999999543 2222 222222 1125789999974322 1222344555555554 58888777774
Q ss_pred --ChhHHHHHHHHHHhhcCCCEEEEeC
Q 025860 157 --PPRFISGLILIIKKVTAKPILIYPN 181 (247)
Q Consensus 157 --~p~~~~~~l~~l~~~~~~pl~vyPN 181 (247)
+++....+++...+ .+.|++++.-
T Consensus 157 a~~~~D~~~l~~~~~~-~~~p~i~~~M 182 (523)
T 2o7s_A 157 AVDIADVARMFHITSK-AQVPTIGLVM 182 (523)
T ss_dssp CSSGGGHHHHHHHHHH-CSSCEEEEEE
T ss_pred CCCHHHHHHHHHHHhh-cCCCEEEEEc
Confidence 67788888876544 3678776654
No 397
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=43.92 E-value=1.5e+02 Score=25.30 Aligned_cols=98 Identities=12% Similarity=0.056 Sum_probs=58.6
Q ss_pred HHHHHhcCCCCEEEEecCC----------------CHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHH
Q 025860 78 RVQVLVESAPDLIAFETIP----------------NKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASI 141 (247)
Q Consensus 78 q~~~l~~~gvD~i~~ET~~----------------~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~ 141 (247)
-++.|.++|++.+-||-.. +..|+..-++++++....-+++|.--.+. .+ .+..++++++.
T Consensus 95 ~v~~l~~aGa~gv~iED~~~~k~cgH~~~~~k~l~p~~e~~~kI~Aa~~a~~~~~~~i~aRtda--~~-a~~g~~~ai~R 171 (290)
T 2hjp_A 95 VVPQYEAAGASAIVMEDKTFPKDTSLRTDGRQELVRIEEFQGKIAAATAARADRDFVVIARVEA--LI-AGLGQQEAVRR 171 (290)
T ss_dssp HHHHHHHHTCSEEEEECBCSSCCC-------CCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECT--TT-TTCCHHHHHHH
T ss_pred HHHHHHHhCCeEEEEcCCCCCccccccccCCCcccCHHHHHHHHHHHHHhcccCCcEEEEeehH--hh-ccccHHHHHHH
Confidence 4556667999999999754 23365555666665532234554443322 21 24457887766
Q ss_pred HHh--CCCCeEEEEcC-C-ChhHHHHHHHHHHhhcCCCEEEEe
Q 025860 142 AES--CKRVVSVGINC-T-PPRFISGLILIIKKVTAKPILIYP 180 (247)
Q Consensus 142 ~~~--~~~~~avG~NC-~-~p~~~~~~l~~l~~~~~~pl~vyP 180 (247)
... ..|+++|=+-| . +++.+..+.+.+. .+.|+++-|
T Consensus 172 a~ay~eAGAd~i~~e~~~~~~~~~~~i~~~~~--~~vP~i~n~ 212 (290)
T 2hjp_A 172 GQAYEEAGADAILIHSRQKTPDEILAFVKSWP--GKVPLVLVP 212 (290)
T ss_dssp HHHHHHTTCSEEEECCCCSSSHHHHHHHHHCC--CSSCEEECG
T ss_pred HHHHHHcCCcEEEeCCCCCCHHHHHHHHHHcC--CCCCEEEec
Confidence 542 25899999999 6 3566554444431 128988744
No 398
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=43.90 E-value=51 Score=29.21 Aligned_cols=127 Identities=13% Similarity=0.003 Sum_probs=75.0
Q ss_pred cCCCCEEEEecC-----------CCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCC-CeEE
Q 025860 84 ESAPDLIAFETI-----------PNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKR-VVSV 151 (247)
Q Consensus 84 ~~gvD~i~~ET~-----------~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~-~~av 151 (247)
+.|+|.|-+--- .+.+.+..+++++++.. ++||++-++..- +-..+.++++.+.+ .+ +++|
T Consensus 153 ~~g~d~ielNisCPn~~gg~~l~~~~e~~~~il~av~~~~-~~PV~vKi~p~~-----d~~~~~~~a~~~~~-~Gg~d~I 225 (354)
T 4ef8_A 153 TEKGVILELNLSCPNVPGKPQVAYDFDAMRQCLTAVSEVY-PHSFGVKMPPYF-----DFAHFDAAAEILNE-FPKVQFI 225 (354)
T ss_dssp HHHCCEEEEECSSCCSTTSCCGGGSHHHHHHHHHHHHHHC-CSCEEEEECCCC-----SHHHHHHHHHHHHT-CTTEEEE
T ss_pred hcCCCEEEEeCCCCCCCCchhhccCHHHHHHHHHHHHHhh-CCCeEEEecCCC-----CHHHHHHHHHHHHh-CCCccEE
Confidence 568999876532 35677888888888875 799998876321 22234555665555 45 7776
Q ss_pred EE-cCC-------------------------Ch---hHHHHHHHHHHhhc-CCCEEEEeCCCCcccccccccccCCCCCh
Q 025860 152 GI-NCT-------------------------PP---RFISGLILIIKKVT-AKPILIYPNSGEFYDADRKEWVQNTGVSD 201 (247)
Q Consensus 152 G~-NC~-------------------------~p---~~~~~~l~~l~~~~-~~pl~vyPNaG~~~d~~~~~~~~~~~~~~ 201 (247)
-+ |.+ ++ ......+.++++.. +.|| ..|+|. .++
T Consensus 226 ~~~NT~~~g~~idi~~~~~~~~~~~~~gGlSG~~i~p~a~~~i~~v~~~~~~ipI--I~~GGI--------------~s~ 289 (354)
T 4ef8_A 226 TCINSIGNGLVIDAETESVVIKPKQGFGGLGGRYVLPTALANINAFYRRCPGKLI--FGCGGV--------------YTG 289 (354)
T ss_dssp EECCCEEEEECEETTTTEESCSGGGGEEEEEGGGGHHHHHHHHHHHHHHCTTSEE--EEESCC--------------CSH
T ss_pred EEecccCcceeeeccCCccccccccccCCCCCCCCchHHHHHHHHHHHhCCCCCE--EEECCc--------------CCH
Confidence 42 321 01 23456667777663 5664 345543 124
Q ss_pred HHHHHHHHHHHHcCCeEEeecCCC---ChHHHHHHHHHh
Q 025860 202 EDFVSYVSKWCEVGASLVGGCCRT---TPNTIKGIYRTL 237 (247)
Q Consensus 202 ~~~~~~~~~~~~~G~~iIGGCCGt---~P~hI~al~~~l 237 (247)
++.. +++..|++.|.=+-+. +|..++.|.+.|
T Consensus 290 ~da~----~~l~aGAd~V~vgra~l~~GP~~~~~i~~~l 324 (354)
T 4ef8_A 290 EDAF----LHVLAGASMVQVGTALQEEGPSIFERLTSEL 324 (354)
T ss_dssp HHHH----HHHHHTEEEEEECHHHHHHCTTHHHHHHHHH
T ss_pred HHHH----HHHHcCCCEEEEhHHHHHhCHHHHHHHHHHH
Confidence 3333 3456788888755442 477777776655
No 399
>1eix_A Orotidine 5'-monophosphate decarboxylase; alpha-beta-barrel, protein-inhibitor complex, homodimer, lyase; HET: BMQ; 2.50A {Escherichia coli} SCOP: c.1.2.3 PDB: 1jjk_A* 1l2u_A
Probab=43.75 E-value=88 Score=25.77 Aligned_cols=96 Identities=8% Similarity=0.110 Sum_probs=58.8
Q ss_pred HHHHHhcCC--CCE--EEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEE
Q 025860 78 RVQVLVESA--PDL--IAFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGI 153 (247)
Q Consensus 78 q~~~l~~~g--vD~--i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~ 153 (247)
.++.+.+.| +|+ +=++-+ ...-..+++.+++. +.++++-+.+.+. |.+....++.+.+ .+++.|-+
T Consensus 29 ~~~~~~~~~~~v~~~Kv~~d~~--~~~G~~~v~~lr~~--~~~v~lD~kl~Di-----p~t~~~~i~~~~~-~Gad~vTv 98 (245)
T 1eix_A 29 ALAFVDKIDPRDCRLKVGKEMF--TLFGPQFVRELQQR--GFDIFLDLKFHDI-----PNTAAHAVAAAAD-LGVWMVNV 98 (245)
T ss_dssp HHHHHTTSCTTTCEEEEEHHHH--HHHHHHHHHHHHHT--TCCEEEEEEECSC-----HHHHHHHHHHHHH-HTCSEEEE
T ss_pred HHHHHHHhCccCcEEEEcHHHH--HHhCHHHHHHHHHC--CCcEEEEeecccc-----HHHHHHHHHHHHh-CCCCEEEE
Confidence 344444445 788 443433 33345567777875 4678777766432 3445556766766 58999999
Q ss_pred cCC-ChhHHHHHHHHHHhhcC-CC-E-EEEeCCC
Q 025860 154 NCT-PPRFISGLILIIKKVTA-KP-I-LIYPNSG 183 (247)
Q Consensus 154 NC~-~p~~~~~~l~~l~~~~~-~p-l-~vyPNaG 183 (247)
++. +++.+.++++.+++.-. .| + .+-++..
T Consensus 99 H~~~g~~~l~~~~~~~~~~G~~~~~~l~v~~~ts 132 (245)
T 1eix_A 99 HASGGARMMTAAREALVPFGKDAPLLIAVTVLTS 132 (245)
T ss_dssp BGGGCHHHHHHHHHTTGGGGGGCCEEEEECSCTT
T ss_pred eccCCHHHHHHHHHHHHHcCCCCCcEEEEEecCC
Confidence 996 56557778887765433 45 3 4555554
No 400
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=43.67 E-value=1.5e+02 Score=25.13 Aligned_cols=90 Identities=17% Similarity=0.183 Sum_probs=56.0
Q ss_pred HHHhcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcC------CCcccCCCcHH---HHHHH---HHhCCC
Q 025860 80 QVLVESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKD------GVNVVSGDSLL---ECASI---AESCKR 147 (247)
Q Consensus 80 ~~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~------~~~l~~G~~~~---~~~~~---~~~~~~ 147 (247)
..|.++|++.+=+|-.. |+...++++.+. +.||+--+=+.+ ++...-|.+-+ ++++. +.+ .|
T Consensus 101 ~rl~kaGa~aVklEgg~---e~~~~I~al~~a--gipV~gHiGLtPq~v~~~ggf~v~grt~~~a~~~i~rA~a~~e-AG 174 (264)
T 1m3u_A 101 ATVMRAGANMVKIEGGE---WLVETVQMLTER--AVPVCGHLGLTPQSVNIFGGYKVQGRGDEAGDQLLSDALALEA-AG 174 (264)
T ss_dssp HHHHHTTCSEEECCCSG---GGHHHHHHHHHT--TCCEEEEEESCGGGHHHHTSSCCCCCSHHHHHHHHHHHHHHHH-HT
T ss_pred HHHHHcCCCEEEECCcH---HHHHHHHHHHHC--CCCeEeeecCCceeecccCCeEEEeCCHHHHHHHHHHHHHHHH-CC
Confidence 34555999999999864 445556666665 589885554432 12223454433 33322 233 58
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhhcCCCEEEE
Q 025860 148 VVSVGINCTPPRFISGLILIIKKVTAKPILIY 179 (247)
Q Consensus 148 ~~avG~NC~~p~~~~~~l~~l~~~~~~pl~vy 179 (247)
+++|=+-|... ++.+.+.+..+.|++..
T Consensus 175 A~~ivlE~vp~----~~a~~it~~l~iP~igI 202 (264)
T 1m3u_A 175 AQLLVLECVPV----ELAKRITEALAIPVIGI 202 (264)
T ss_dssp CCEEEEESCCH----HHHHHHHHHCSSCEEEE
T ss_pred CcEEEEecCCH----HHHHHHHHhCCCCEEEe
Confidence 99999999853 35566777778897654
No 401
>1t7l_A 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; TIM barrel, methyltetrahydrofolate, zinc; 2.00A {Thermotoga maritima} PDB: 3bq5_A 3bq6_A 1xdj_A 1xr2_A* 1xpg_A*
Probab=43.45 E-value=83 Score=30.97 Aligned_cols=137 Identities=11% Similarity=0.047 Sum_probs=77.1
Q ss_pred HHHHHHHHHHHHHHHhcCCCCEEEEe------cCCC-----HHHHHHHHHHHHhh---CCCCcEEEEEEEcCCCcccCCC
Q 025860 68 VETLKDFHRRRVQVLVESAPDLIAFE------TIPN-----KIEAQAYAELLEEE---NIKIPAWFSFNSKDGVNVVSGD 133 (247)
Q Consensus 68 ~~e~~~~~~~q~~~l~~~gvD~i~~E------T~~~-----~~E~~aa~~~~~~~---~~~~pv~is~~~~~~~~l~~G~ 133 (247)
.+++...|++.++.|.++|++.|-|. .++. ...++.++++++.. ..+..+.+.+++ +
T Consensus 584 l~dLA~ayreeI~~L~~AGa~~IQIDEPaL~~~L~~~~~d~~~~l~~a~~aln~a~gv~~~~~I~lH~C~-G-------- 654 (766)
T 1t7l_A 584 AYQIALAINEEVKDLEEAGIKIVQIDEPAFREKAPIKKSKWPEYFEWAINAFNLAANARPETQIHAHMCY-S-------- 654 (766)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEEEECTHHHHTSCSSGGGHHHHHHHHHHHHHHHTCCCTTSEEEEECCC-S--------
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEcCCcccccCCCcchhHHHHHHHHHHHHHHhhcCCCCceEEEEEec-C--------
Confidence 46788899999999999999987543 2222 12344555666543 112344433322 2
Q ss_pred cHHHHHHHHHhCCCCeEEEEcCC-ChhHHHHHHHHHHhhcCCCEEEEeCCCCcccccccccccCCCCChHHHHHHHHHHH
Q 025860 134 SLLECASIAESCKRVVSVGINCT-PPRFISGLILIIKKVTAKPILIYPNSGEFYDADRKEWVQNTGVSDEDFVSYVSKWC 212 (247)
Q Consensus 134 ~~~~~~~~~~~~~~~~avG~NC~-~p~~~~~~l~~l~~~~~~pl~vyPNaG~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (247)
++.+.+..+.+ .++++|++-.. +.. .+++.+....+.+-.+.+ | ++|.. ..|.+ ++++..+.+++..
T Consensus 655 ~~~di~~~L~~-l~VD~IsLE~~Rs~~---elL~~l~~~p~~~k~L~l--G-VVD~r-n~~ve----d~EeI~~rI~~a~ 722 (766)
T 1t7l_A 655 DFNEIIEYIHQ-LEFDVISIEASRSKG---EIISAFENFKGWIKQIGV--G-VWDIH-SPAVP----SINEMREIVERVL 722 (766)
T ss_dssp CCTTTHHHHTT-SCCSEEEEECTTTTT---GGGHHHHTSTTCCSEEEE--E-CSCTT-SCSCC----CHHHHHHHHHHHT
T ss_pred chHHHHHHHHc-CCCCEEEEecCCCch---hHHHHHHhccccCCeEEE--E-EECCC-CCCCC----CHHHHHHHHHHHH
Confidence 11244555555 58999999975 433 344444321111111111 1 13332 34543 5888888887776
Q ss_pred Hc-CCe--EEeecCCC
Q 025860 213 EV-GAS--LVGGCCRT 225 (247)
Q Consensus 213 ~~-G~~--iIGGCCGt 225 (247)
+. |.. +|.=-||-
T Consensus 723 ~~Vg~erL~VsPdCGL 738 (766)
T 1t7l_A 723 RVLPKELIWINPDCGL 738 (766)
T ss_dssp TTSCGGGEEEECSSCC
T ss_pred HhcCcccEEEeCCCCC
Confidence 54 655 88999984
No 402
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=43.36 E-value=93 Score=25.72 Aligned_cols=78 Identities=14% Similarity=0.136 Sum_probs=45.4
Q ss_pred CCHHHHHHHHHHHHHHHhcCCCCEEEEecCCCHHH----HHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHH-
Q 025860 66 ITVETLKDFHRRRVQVLVESAPDLIAFETIPNKIE----AQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECAS- 140 (247)
Q Consensus 66 ~s~~e~~~~~~~q~~~l~~~gvD~i~~ET~~~~~E----~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~- 140 (247)
++.+++.+.|++ +. ...|++++|+-..+.+ -....++++.. +.||++-..... | ++..+..
T Consensus 116 i~~~~I~~~~~~----l~-~~~D~vlIEGagGl~~pl~~~~~~adlA~~l--~~pVILV~~~~l------g-~i~~~~lt 181 (242)
T 3qxc_A 116 IDTDNLTQRLHN----FT-KTYDLVIVEGAGGLCVPITLEENMLDFALKL--KAKMLLISHDNL------G-LINDCLLN 181 (242)
T ss_dssp CCHHHHHHHHHH----GG-GTCSEEEEECCSCTTCBSSSSCBHHHHHHHH--TCEEEEEECCST------T-HHHHHHHH
T ss_pred CCHHHHHHHHHH----HH-hcCCEEEEECCCCccccccccchHHHHHHHc--CCCEEEEEcCCC------c-HHHHHHHH
Confidence 455666665543 32 5789999999755543 12345567776 589887664432 3 4444433
Q ss_pred --HHHh-CCCCeEEEEcCCCh
Q 025860 141 --IAES-CKRVVSVGINCTPP 158 (247)
Q Consensus 141 --~~~~-~~~~~avG~NC~~p 158 (247)
.+.. ... .+|-+|+..+
T Consensus 182 ~~~l~~~g~~-~GvIlN~v~~ 201 (242)
T 3qxc_A 182 DFLLKSHQLD-YKIAINLKGN 201 (242)
T ss_dssp HHHHHTSSSC-EEEEECCCTT
T ss_pred HHHHHhCCCC-EEEEEeCCCC
Confidence 3332 234 6777999843
No 403
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=43.15 E-value=1.2e+02 Score=23.95 Aligned_cols=92 Identities=15% Similarity=0.155 Sum_probs=49.5
Q ss_pred HHHHHHhcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcC--CCcccCCCcHHHHHHHHHhCCCCeEEEEc
Q 025860 77 RRVQVLVESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKD--GVNVVSGDSLLECASIAESCKRVVSVGIN 154 (247)
Q Consensus 77 ~q~~~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~--~~~l~~G~~~~~~~~~~~~~~~~~avG~N 154 (247)
+.++.+.++|++.|.+.+ ... ++.+++.. ++|+. .....+ +..+.-+.+..++ +.+.. .+++.|-+.
T Consensus 27 ~~a~~~~~~Ga~~i~~~~---~~~----i~~i~~~~-~~pv~-~~~~~~~~~~~~~i~~~~~~i-~~~~~-~Gad~v~l~ 95 (223)
T 1y0e_A 27 KMALAAYEGGAVGIRANT---KED----ILAIKETV-DLPVI-GIVKRDYDHSDVFITATSKEV-DELIE-SQCEVIALD 95 (223)
T ss_dssp HHHHHHHHHTCSEEEEES---HHH----HHHHHHHC-CSCEE-EECBCCCTTCCCCBSCSHHHH-HHHHH-HTCSEEEEE
T ss_pred HHHHHHHHCCCeeeccCC---HHH----HHHHHHhc-CCCEE-eeeccCCCccccccCCcHHHH-HHHHh-CCCCEEEEe
Confidence 477778889999997753 333 33445543 68883 322111 2222223344443 33433 367777666
Q ss_pred CC---Ch-hHHHHHHHHHHhhc-CCCEEEE
Q 025860 155 CT---PP-RFISGLILIIKKVT-AKPILIY 179 (247)
Q Consensus 155 C~---~p-~~~~~~l~~l~~~~-~~pl~vy 179 (247)
.. .| +.+..+++.+++.. +.++++-
T Consensus 96 ~~~~~~p~~~~~~~i~~~~~~~~~~~v~~~ 125 (223)
T 1y0e_A 96 ATLQQRPKETLDELVSYIRTHAPNVEIMAD 125 (223)
T ss_dssp CSCSCCSSSCHHHHHHHHHHHCTTSEEEEE
T ss_pred eecccCcccCHHHHHHHHHHhCCCceEEec
Confidence 64 24 45567777776653 4455543
No 404
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=42.88 E-value=1.7e+02 Score=25.49 Aligned_cols=95 Identities=9% Similarity=-0.047 Sum_probs=54.8
Q ss_pred HHHHhcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCc----------------------------cc
Q 025860 79 VQVLVESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVN----------------------------VV 130 (247)
Q Consensus 79 ~~~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~----------------------------l~ 130 (247)
+.+..++|.--++.=.+-+.++++..++.+++.. +.|+-+.+.+..... +.
T Consensus 28 a~av~~aGglG~i~~~~~s~~~l~~~i~~~~~~~-~~p~gVnl~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~ 106 (369)
T 3bw2_A 28 AAAVCEAGGLGFLAAGYKTADGMYQEIKRLRGLT-GRPFGVNVFMPQPELAESGAVEVYAHQLAGEAAWYETELGDPDGG 106 (369)
T ss_dssp HHHHHHTTSBEEEECTTSCHHHHHHHHHHHHHHC-CSCEEEEEECCCCCC---CHHHHHHHHTHHHHHHTTCCCCCSCSC
T ss_pred HHHHHHCCCEEEcCCCCCCHHHHHHHHHHHHHhC-CCCeEEEEecCCCCcccHHHHHHHHHHHHHHHHHcCCCcCccccc
Confidence 3344456643333335566888888888777754 568877776543321 01
Q ss_pred CCCcHHHHHHHHHhCCCCeEEEEcCCChhHHHHHHHHHHhhcCCCEEE
Q 025860 131 SGDSLLECASIAESCKRVVSVGINCTPPRFISGLILIIKKVTAKPILI 178 (247)
Q Consensus 131 ~G~~~~~~~~~~~~~~~~~avG~NC~~p~~~~~~l~~l~~~~~~pl~v 178 (247)
....+.+.++.+.+ .+++.|.++...|. .+.++.++. .+.++++
T Consensus 107 ~~~~~~~~~~~~~~-~g~~~V~~~~g~~~--~~~i~~~~~-~g~~v~~ 150 (369)
T 3bw2_A 107 RDDGYDAKLAVLLD-DPVPVVSFHFGVPD--REVIARLRR-AGTLTLV 150 (369)
T ss_dssp SSTTHHHHHHHHHH-SCCSEEEEESSCCC--HHHHHHHHH-TTCEEEE
T ss_pred ccccHHHHHHHHHh-cCCCEEEEeCCCCc--HHHHHHHHH-CCCeEEE
Confidence 12336777777776 58999888876432 234444444 2455543
No 405
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=42.68 E-value=53 Score=30.02 Aligned_cols=14 Identities=14% Similarity=0.437 Sum_probs=9.7
Q ss_pred HHHHhcCCCCEEEE
Q 025860 79 VQVLVESAPDLIAF 92 (247)
Q Consensus 79 ~~~l~~~gvD~i~~ 92 (247)
++.+.++|+|+|.+
T Consensus 292 a~~l~~~G~d~I~v 305 (494)
T 1vrd_A 292 TEALIKAGADAVKV 305 (494)
T ss_dssp HHHHHHTTCSEEEE
T ss_pred HHHHHHcCCCEEEE
Confidence 45566678888776
No 406
>1p1p_A AA-conotoxin PIVA; neurotoxin, acetylcholine receptor binding, transcription regulation; HET: HYP; NMR {Conus purpurascens} SCOP: j.30.1.3
Probab=42.66 E-value=7 Score=20.84 Aligned_cols=8 Identities=63% Similarity=1.647 Sum_probs=6.2
Q ss_pred ecCCCChH
Q 025860 221 GCCRTTPN 228 (247)
Q Consensus 221 GCCGt~P~ 228 (247)
||||.-|.
T Consensus 1 gccg~ypn 8 (26)
T 1p1p_A 1 GCCGSYPN 8 (26)
T ss_dssp CCSTTSCC
T ss_pred CccccCCC
Confidence 79998763
No 407
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=42.61 E-value=1.2e+02 Score=23.68 Aligned_cols=43 Identities=19% Similarity=0.062 Sum_probs=22.9
Q ss_pred cHHHHHHHHHhCCCCeEEEEcCCC--------hhHHHHHHHHHHhhcCCCEEE
Q 025860 134 SLLECASIAESCKRVVSVGINCTP--------PRFISGLILIIKKVTAKPILI 178 (247)
Q Consensus 134 ~~~~~~~~~~~~~~~~avG~NC~~--------p~~~~~~l~~l~~~~~~pl~v 178 (247)
+..++... .. .+++.|.++-.. ...-...++.+++..+.|+++
T Consensus 117 t~~e~~~~-~~-~g~d~i~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~pvia 167 (215)
T 1xi3_A 117 SLEEALEA-EK-KGADYLGAGSVFPTKTKEDARVIGLEGLRKIVESVKIPVVA 167 (215)
T ss_dssp SHHHHHHH-HH-HTCSEEEEECSSCC----CCCCCHHHHHHHHHHHCSSCEEE
T ss_pred CHHHHHHH-Hh-cCCCEEEEcCCccCCCCCCCCCcCHHHHHHHHHhCCCCEEE
Confidence 34554443 33 368888875411 122345666666656777543
No 408
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=42.47 E-value=48 Score=29.40 Aligned_cols=16 Identities=6% Similarity=0.079 Sum_probs=11.6
Q ss_pred HHHHHHhcCCCCEEEE
Q 025860 77 RRVQVLVESAPDLIAF 92 (247)
Q Consensus 77 ~q~~~l~~~gvD~i~~ 92 (247)
+.++.+.++|||.|.+
T Consensus 229 e~A~~a~~~GaD~I~v 244 (352)
T 3sgz_A 229 EDAELAMKHNVQGIVV 244 (352)
T ss_dssp HHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHcCCCEEEE
Confidence 4466677788888876
No 409
>1o7j_A L-asparaginase; atomic resolution, hydrolase; 1.0A {Erwinia chrysanthemi} SCOP: c.88.1.1 PDB: 1hfj_A 1hfk_A* 1hg0_A 1hg1_A 1hfw_A* 1jsr_A* 1jsl_A 2gvn_A 1zcf_A 2hln_A* 2jk0_A
Probab=42.29 E-value=39 Score=29.55 Aligned_cols=49 Identities=10% Similarity=0.063 Sum_probs=33.6
Q ss_pred HHHHHhcCCCCEEEEecCCCH---HHHHHHHHHHHhhCCCCcEEEEEEEcCCCc
Q 025860 78 RVQVLVESAPDLIAFETIPNK---IEAQAYAELLEEENIKIPAWFSFNSKDGVN 128 (247)
Q Consensus 78 q~~~l~~~gvD~i~~ET~~~~---~E~~aa~~~~~~~~~~~pv~is~~~~~~~~ 128 (247)
.++.+++.|++.|++|++..- .++..+++-+.+. ++||+++-.|..+..
T Consensus 233 ~l~~~~~~g~~GiVle~~G~Gn~p~~~~~~l~~a~~~--Gi~VV~~Sr~~~G~v 284 (327)
T 1o7j_A 233 LYDAAIQHGVKGIVYAGMGAGSVSVRGIAGMRKALEK--GVVVMRSTRTGNGIV 284 (327)
T ss_dssp HHHHHHHTTCSEEEEEEBTTTBCCHHHHHHHHHHHHT--TCEEEEEESSSBSCB
T ss_pred HHHHHHhCCCCEEEEeeECCCCCCHHHHHHHHHHHHC--CceEEEECCCCCCCc
Confidence 566677789999999998753 4444445444443 589888877765443
No 410
>1gxg_A Colicin E8 immunity protein; inhibitor, inhibitor protein of DNAse colicin E8, bacteriocin immunity, plasmid,; NMR {Escherichia coli} SCOP: a.28.2.1 PDB: 1gxh_A
Probab=42.25 E-value=15 Score=25.87 Aligned_cols=43 Identities=19% Similarity=0.370 Sum_probs=30.1
Q ss_pred hHHHHHHHHHHhhcCCC----EEEEeCCCCcccccccccccCCCCChHHHHHHHHHHHHc
Q 025860 159 RFISGLILIIKKVTAKP----ILIYPNSGEFYDADRKEWVQNTGVSDEDFVSYVSKWCEV 214 (247)
Q Consensus 159 ~~~~~~l~~l~~~~~~p----l~vyPNaG~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (247)
+.+..+|..+.+.+.-| |+.||+.+. ..+|+...+.+++|+..
T Consensus 30 e~~d~ll~~f~~~teHP~gSDLIfyP~~~~-------------e~spE~Iv~~ik~wRa~ 76 (85)
T 1gxg_A 30 KKQDDNLEHFISVTEHPSGSDLIYYPEGNN-------------DGSPEAVIKEIKEWRAA 76 (85)
T ss_dssp HHHHHHHHHHHHTTCCTTTTHHHHSCCTTC-------------CSSHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHhcCCCCcCceeecCCCCC-------------CCCHHHHHHHHHHHHHH
Confidence 34777888777765544 666666531 25799999999999863
No 411
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=42.23 E-value=44 Score=28.20 Aligned_cols=45 Identities=13% Similarity=0.087 Sum_probs=28.2
Q ss_pred HHHHHHHHHhcCCCCEEEEec--CCCHHHHHHHHHHHHhhCCCCcEEEEE
Q 025860 74 FHRRRVQVLVESAPDLIAFET--IPNKIEAQAYAELLEEENIKIPAWFSF 121 (247)
Q Consensus 74 ~~~~q~~~l~~~gvD~i~~ET--~~~~~E~~aa~~~~~~~~~~~pv~is~ 121 (247)
.|.+++..++++|..+|+ |- -.++.|++.+++++++. ++++++.+
T Consensus 77 ~H~~~~~~al~aGkhVl~-EKPla~~~~ea~~l~~~a~~~--g~~~~~~~ 123 (294)
T 1lc0_A 77 SHEDYIRQFLQAGKHVLV-EYPMTLSFAAAQELWELAAQK--GRVLHEEH 123 (294)
T ss_dssp GHHHHHHHHHHTTCEEEE-ESCSCSCHHHHHHHHHHHHHT--TCCEEEEC
T ss_pred hHHHHHHHHHHCCCcEEE-eCCCCCCHHHHHHHHHHHHHh--CCEEEEEE
Confidence 566777777777766554 73 34577777777777665 35555444
No 412
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus}
Probab=42.18 E-value=1.5e+02 Score=24.85 Aligned_cols=130 Identities=15% Similarity=0.099 Sum_probs=0.0
Q ss_pred HHHHHHHhcCCCCEEEEecCCCHHHHHHHHHHHHhh---CCCCcEEEEE---EEcCCCcc-----cCCCcHHHHHHHHHh
Q 025860 76 RRRVQVLVESAPDLIAFETIPNKIEAQAYAELLEEE---NIKIPAWFSF---NSKDGVNV-----VSGDSLLECASIAES 144 (247)
Q Consensus 76 ~~q~~~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~---~~~~pv~is~---~~~~~~~l-----~~G~~~~~~~~~~~~ 144 (247)
...++.+.+.|+|++-+=...-..-++++++.+++. +.+.|-++.+ |..+...+ .++..-+.+.+....
T Consensus 73 ~~a~~~~~~~gad~vTVh~~~G~~~~~aa~~~~~~~~~~g~~~~~li~Vt~lTS~~~~~l~~~~g~~~~~~e~v~~~A~~ 152 (259)
T 3tfx_A 73 YNGAKALAKLGITFTTVHALGGSQMIKSAKDGLIAGTPAGHSVPKLLAVTELTSISDDVLRNEQNCRLPMAEQVLSLAKM 152 (259)
T ss_dssp HHHHHHHHTTTCSEEEEEGGGCHHHHHHHHHHHHHHSCTTSCCCEEEEECSCTTCCHHHHHHTSCBSSCHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHHHHHhcccCCCCceEEEEEEeCCCCHHHHHHHhCCCCCHHHHHHHHHHH
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhhcCCCEEEEeCCCCcccccccccccCCCCChHHHHHHHHHHHHcCCeEE
Q 025860 145 CKRVVSVGINCTPPRFISGLILIIKKVTAKPILIYPNSGEFYDADRKEWVQNTGVSDEDFVSYVSKWCEVGASLV 219 (247)
Q Consensus 145 ~~~~~avG~NC~~p~~~~~~l~~l~~~~~~pl~vyPNaG~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~iI 219 (247)
....-.-|+=|+ |+.+..+=+.+ ....+++-|--+...+. .+.+.=.....+.+++|+++|
T Consensus 153 a~~~G~dGvV~s-~~e~~~ir~~~---~~~f~~vtPGIr~~g~~----------~gDQ~Rv~T~~~a~~aGad~i 213 (259)
T 3tfx_A 153 AKHSGADGVICS-PLEVKKLHENI---GDDFLYVTPGIRPAGNA----------KDDQSRVATPKMAKEWGSSAI 213 (259)
T ss_dssp HHHTTCCEEECC-GGGHHHHHHHH---CSSSEEEECCCCCC---------------------CHHHHHHTTCSEE
T ss_pred HHHhCCCEEEEC-HHHHHHHHhhc---CCccEEEcCCcCCCCCC----------cCCccccCCHHHHHHcCCCEE
No 413
>1us2_A Xylanase10C, endo-beta-1,4-xylanase; hydrolase, carbohydrate binding module, xylan degradation; HET: XYP; 1.85A {Cellvibrio japonicus} SCOP: b.18.1.11 c.1.8.3 PDB: 1us3_A
Probab=42.14 E-value=47 Score=31.23 Aligned_cols=50 Identities=10% Similarity=0.063 Sum_probs=38.2
Q ss_pred HHHHHHHHHHhcCC--CCEEEEec-----CCCHHHHHHHHHHHHhhCCCCcEEEE-EEEc
Q 025860 73 DFHRRRVQVLVESA--PDLIAFET-----IPNKIEAQAYAELLEEENIKIPAWFS-FNSK 124 (247)
Q Consensus 73 ~~~~~q~~~l~~~g--vD~i~~ET-----~~~~~E~~aa~~~~~~~~~~~pv~is-~~~~ 124 (247)
+.+..+++.|.+.| +|.|-+.. .|++.+++.+++.+... ++||+|+ +.+.
T Consensus 360 ~~~~~lVk~l~~~GvpIDGIG~Q~H~~~~~p~~~~i~~~L~~~a~l--GlpI~ITElDv~ 417 (530)
T 1us2_A 360 TKMVDMVKDFQARSIPIDGVGFQMHVCMNYPSIANISAAMKKVVDL--GLLVKITELDVA 417 (530)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEECCEEESSCSCHHHHHHHHHHHHTT--TCEEEEEEEEEE
T ss_pred HHHHHHHHHHHHCCCceeEEEEeeecCCCCCCHHHHHHHHHHHHhc--CCeEEEEeCccC
Confidence 44666888888778 59987753 47889999999888876 5899998 5543
No 414
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=42.12 E-value=54 Score=24.23 Aligned_cols=58 Identities=17% Similarity=0.125 Sum_probs=35.5
Q ss_pred CCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEEcCCChh
Q 025860 87 PDLIAFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGINCTPPR 159 (247)
Q Consensus 87 vD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~NC~~p~ 159 (247)
+|+..+=+ ..+....+++-+.+.+.+ -+|++ .|..=+++.+.+++ .+...+| ||.+..
T Consensus 59 vDlavi~~--p~~~v~~~v~e~~~~g~k-~v~~~----------~G~~~~e~~~~a~~-~Girvv~-nC~gv~ 116 (122)
T 3ff4_A 59 VDTVTLYI--NPQNQLSEYNYILSLKPK-RVIFN----------PGTENEELEEILSE-NGIEPVI-GCTLVM 116 (122)
T ss_dssp CCEEEECS--CHHHHGGGHHHHHHHCCS-EEEEC----------TTCCCHHHHHHHHH-TTCEEEE-SCHHHH
T ss_pred CCEEEEEe--CHHHHHHHHHHHHhcCCC-EEEEC----------CCCChHHHHHHHHH-cCCeEEC-CcCeEE
Confidence 88887744 234455556655555533 36643 23323577777776 5889999 997543
No 415
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=41.69 E-value=61 Score=26.27 Aligned_cols=48 Identities=13% Similarity=0.135 Sum_probs=28.6
Q ss_pred HHHHHHhcCCCCEEEEe-----cCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcC
Q 025860 77 RRVQVLVESAPDLIAFE-----TIPNKIEAQAYAELLEEENIKIPAWFSFNSKD 125 (247)
Q Consensus 77 ~q~~~l~~~gvD~i~~E-----T~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~ 125 (247)
+.++.+.+.|+|++=+- ++++.......++.+++.. +.|+-+-+-+.+
T Consensus 23 ~~i~~~~~~Gad~i~l~i~Dg~fv~~~~~~~~~~~~lr~~~-~~~~~v~lmv~d 75 (228)
T 1h1y_A 23 AEADRMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKHT-KAYLDCHLMVTN 75 (228)
T ss_dssp HHHHHHHHTTCSEEEEEEEBSSSSSCBCBCHHHHHHHHTTC-CSEEEEEEESSC
T ss_pred HHHHHHHHcCCCEEEEEEecCCcCcchhhCHHHHHHHHhhc-CCcEEEEEEecC
Confidence 47777888999987444 4555322223444455543 467776666544
No 416
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=41.68 E-value=1.2e+02 Score=23.82 Aligned_cols=42 Identities=10% Similarity=0.121 Sum_probs=27.3
Q ss_pred HHHHHHHhcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEE
Q 025860 76 RRRVQVLVESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAWFS 120 (247)
Q Consensus 76 ~~q~~~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is 120 (247)
.+.++.+.++|+|.|-+ +..+...++.+.+..++. +.|+++.
T Consensus 22 ~~~~~~~~~~G~~~i~l-~~~~~~~~~~i~~i~~~~--~~~l~vg 63 (212)
T 2v82_A 22 LAHVGAVIDAGFDAVEI-PLNSPQWEQSIPAIVDAY--GDKALIG 63 (212)
T ss_dssp HHHHHHHHHHTCCEEEE-ETTSTTHHHHHHHHHHHH--TTTSEEE
T ss_pred HHHHHHHHHCCCCEEEE-eCCChhHHHHHHHHHHhC--CCCeEEE
Confidence 44788888899999988 444554455444444444 4677774
No 417
>1eix_A Orotidine 5'-monophosphate decarboxylase; alpha-beta-barrel, protein-inhibitor complex, homodimer, lyase; HET: BMQ; 2.50A {Escherichia coli} SCOP: c.1.2.3 PDB: 1jjk_A* 1l2u_A
Probab=41.65 E-value=1e+02 Score=25.39 Aligned_cols=103 Identities=13% Similarity=0.070 Sum_probs=56.3
Q ss_pred HHHHHhcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCC---CcccC-C--CcHHHHHHHHHh-CCCCeE
Q 025860 78 RVQVLVESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDG---VNVVS-G--DSLLECASIAES-CKRVVS 150 (247)
Q Consensus 78 q~~~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~---~~l~~-G--~~~~~~~~~~~~-~~~~~a 150 (247)
.++.+.+.|+|++-+=.....+-++.+++.+++.+.+.|-.+.++.... ..+.. | .++.+.+..+.. ..++-.
T Consensus 84 ~i~~~~~~Gad~vTvH~~~g~~~l~~~~~~~~~~G~~~~~~l~v~~~ts~~~~~l~~~~~~~~~~d~Vl~ma~~~~~~G~ 163 (245)
T 1eix_A 84 AVAAAADLGVWMVNVHASGGARMMTAAREALVPFGKDAPLLIAVTVLTSMEASDLVDLGMTLSPADYAERLAALTQKCGL 163 (245)
T ss_dssp HHHHHHHHTCSEEEEBGGGCHHHHHHHHHTTGGGGGGCCEEEEECSCTTCCHHHHHTTTCCSCHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhCCCCEEEEeccCCHHHHHHHHHHHHHcCCCCCcEEEEEecCCCCHHHHHHhccCCCHHHHHHHHHHHHHHcCC
Confidence 3555677899999887777666578888888877532454555553222 12211 1 245565544421 112224
Q ss_pred EEEcCCChhHHHHHHHHHHhhcCCCEEEEeCCCC
Q 025860 151 VGINCTPPRFISGLILIIKKVTAKPILIYPNSGE 184 (247)
Q Consensus 151 vG~NC~~p~~~~~~l~~l~~~~~~pl~vyPNaG~ 184 (247)
.||-|+.-+ +. .|+++. .+.++.+-|.-+.
T Consensus 164 ~g~V~~~~e-i~-~lr~~~--~~~~i~v~gGI~~ 193 (245)
T 1eix_A 164 DGVVCSAQE-AV-RFKQVF--GQEFKLVTPGIRP 193 (245)
T ss_dssp SEEECCGGG-HH-HHHHHH--CSSSEEEECCBCC
T ss_pred CeEEeCHHH-HH-HHHHhc--CCCCEEEECCcCC
Confidence 468887533 32 333332 1356778776543
No 418
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=41.64 E-value=1.3e+02 Score=23.88 Aligned_cols=81 Identities=17% Similarity=0.115 Sum_probs=45.6
Q ss_pred HHHHHHHhcCCCCEEEEecCC----CHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEE
Q 025860 76 RRRVQVLVESAPDLIAFETIP----NKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSV 151 (247)
Q Consensus 76 ~~q~~~l~~~gvD~i~~ET~~----~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~av 151 (247)
.+.++.+.+.|+|.|.+-.+. ........++.+++.. ++|+++.-.+ .+++++- .+.. .++++|
T Consensus 36 ~~~a~~~~~~G~d~i~v~~~~~~~~~~~~~~~~i~~i~~~~-~ipvi~~g~i---------~~~~~~~-~~~~-~Gad~V 103 (253)
T 1h5y_A 36 VEMAVRYEEEGADEIAILDITAAPEGRATFIDSVKRVAEAV-SIPVLVGGGV---------RSLEDAT-TLFR-AGADKV 103 (253)
T ss_dssp HHHHHHHHHTTCSCEEEEECCCCTTTHHHHHHHHHHHHHHC-SSCEEEESSC---------CSHHHHH-HHHH-HTCSEE
T ss_pred HHHHHHHHHcCCCEEEEEeCCccccCCcccHHHHHHHHHhc-CCCEEEECCC---------CCHHHHH-HHHH-cCCCEE
Confidence 447777888999977654322 1222223344445443 6898864311 2345553 3444 378999
Q ss_pred EEcCC---ChhHHHHHHHHH
Q 025860 152 GINCT---PPRFISGLILII 168 (247)
Q Consensus 152 G~NC~---~p~~~~~~l~~l 168 (247)
.++.. .|+.+.++.+.+
T Consensus 104 ~i~~~~~~~~~~~~~~~~~~ 123 (253)
T 1h5y_A 104 SVNTAAVRNPQLVALLAREF 123 (253)
T ss_dssp EESHHHHHCTHHHHHHHHHH
T ss_pred EEChHHhhCcHHHHHHHHHc
Confidence 99873 465555555543
No 419
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=41.49 E-value=58 Score=28.30 Aligned_cols=15 Identities=20% Similarity=0.222 Sum_probs=10.1
Q ss_pred HHHHHhcCCCCEEEE
Q 025860 78 RVQVLVESAPDLIAF 92 (247)
Q Consensus 78 q~~~l~~~gvD~i~~ 92 (247)
.++.+.++|||.|.+
T Consensus 162 ~A~~a~~aGad~Ivv 176 (336)
T 1ypf_A 162 AVRELENAGADATKV 176 (336)
T ss_dssp HHHHHHHHTCSEEEE
T ss_pred HHHHHHHcCCCEEEE
Confidence 455566677777777
No 420
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=41.22 E-value=63 Score=26.03 Aligned_cols=42 Identities=14% Similarity=0.206 Sum_probs=26.7
Q ss_pred HHHHHhcCCCCEEEEecC--CCHHHHHHHHHHHHhhCCCCcEEEEEE
Q 025860 78 RVQVLVESAPDLIAFETI--PNKIEAQAYAELLEEENIKIPAWFSFN 122 (247)
Q Consensus 78 q~~~l~~~gvD~i~~ET~--~~~~E~~aa~~~~~~~~~~~pv~is~~ 122 (247)
.++.+.++|+|++.+=-. +. .+...+++.+++. ++.+++++.
T Consensus 83 ~v~~~~~~Gad~v~vh~~~~~~-~~~~~~~~~~~~~--g~~ig~~~~ 126 (230)
T 1rpx_A 83 RVPDFIKAGADIVSVHCEQSST-IHLHRTINQIKSL--GAKAGVVLN 126 (230)
T ss_dssp HHHHHHHTTCSEEEEECSTTTC-SCHHHHHHHHHHT--TSEEEEEEC
T ss_pred HHHHHHHcCCCEEEEEecCccc-hhHHHHHHHHHHc--CCcEEEEeC
Confidence 566667799999965443 32 3445566666665 467777763
No 421
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=41.12 E-value=1.6e+02 Score=24.74 Aligned_cols=24 Identities=25% Similarity=0.423 Sum_probs=18.9
Q ss_pred hhHHHHHHHHHHhhcCCCEEE--EeC
Q 025860 158 PRFISGLILIIKKVTAKPILI--YPN 181 (247)
Q Consensus 158 p~~~~~~l~~l~~~~~~pl~v--yPN 181 (247)
.+.+..+++.+++..+.|+++ |.|
T Consensus 76 ~~~~~~~v~~ir~~~~~Pii~m~y~n 101 (271)
T 1ujp_A 76 VQGALELVREVRALTEKPLFLMTYLN 101 (271)
T ss_dssp HHHHHHHHHHHHHHCCSCEEEECCHH
T ss_pred HHHHHHHHHHHHhcCCCCEEEEecCc
Confidence 455677888888878899888 777
No 422
>1v0l_A Endo-1,4-beta-xylanase A; glycoside hydrolase family 10, xylan degradation, isofagomine, hydrolase; 0.98A {Streptomyces lividans} SCOP: c.1.8.3 PDB: 1e0x_A 1e0w_A* 1od8_A 1v0k_A 1v0m_A 1v0n_A 1e0v_A* 1xas_A 2g3i_A 2g3j_A* 2g4f_A 1v6y_A
Probab=40.97 E-value=28 Score=30.15 Aligned_cols=20 Identities=0% Similarity=-0.097 Sum_probs=8.6
Q ss_pred HHHHHHHHHHHhhCCCCcEEEE
Q 025860 99 IEAQAYAELLEEENIKIPAWFS 120 (247)
Q Consensus 99 ~E~~aa~~~~~~~~~~~pv~is 120 (247)
.+++..++.+.+. ++||+||
T Consensus 216 ~~~~~~l~~~a~~--G~pv~iT 235 (313)
T 1v0l_A 216 SNFRTTLQNFAAL--GVDVAIT 235 (313)
T ss_dssp TTHHHHHHHHHTT--TCEEEEE
T ss_pred HHHHHHHHHHHhc--CCeEEEE
Confidence 4444444444433 2455444
No 423
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=40.48 E-value=1.7e+02 Score=24.72 Aligned_cols=146 Identities=9% Similarity=0.038 Sum_probs=72.5
Q ss_pred CeEEEE-ecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCEEEEecCCC----HHHHHHHHHHHHhhC
Q 025860 38 PILVAA-SVGSYGAYLADGSEYSGNYGDAITVETLKDFHRRRVQVLVESAPDLIAFETIPN----KIEAQAYAELLEEEN 112 (247)
Q Consensus 38 ~~~VaG-siGP~g~~l~~g~eY~g~y~~~~s~~e~~~~~~~q~~~l~~~gvD~i~~ET~~~----~~E~~aa~~~~~~~~ 112 (247)
+..|.| -+-++...+.+|..| .+.+.+.+ +++.+++.|+|+|=+-.-++ ++.+..+++.+++..
T Consensus 9 ~~~iigEilN~Tpdsf~dg~~~-------~~~~~a~~----~a~~~v~~GAdiIDIg~~s~~~eE~~rv~~vi~~l~~~~ 77 (271)
T 2yci_X 9 MFIMIGERINGMFKDIREAILN-------KDPRPIQE----WARRQAEKGAHYLDVNTGPTADDPVRVMEWLVKTIQEVV 77 (271)
T ss_dssp CCEEEEEEEETTSHHHHHHHHT-------TCCHHHHH----HHHHHHHTTCSEEEEECCSCSSCHHHHHHHHHHHHHHHC
T ss_pred CCEEEEEecCCChhhHHHhhhh-------CCHHHHHH----HHHHHHHCCCCEEEEcCCcCchhHHHHHHHHHHHHHHhC
Confidence 345555 444444344444322 12355555 55556679999997776664 344555566666542
Q ss_pred CCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEE-EcCCChhHHHHHHHHHHhhcCCCEEEEeC--CCCccccc
Q 025860 113 IKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVG-INCTPPRFISGLILIIKKVTAKPILIYPN--SGEFYDAD 189 (247)
Q Consensus 113 ~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG-~NC~~p~~~~~~l~~l~~~~~~pl~vyPN--aG~~~d~~ 189 (247)
++|+ |+.. ...+-+-..++...|++.|- +|-.. +.+..+++..++ .+.|+++.++ .|.+.+
T Consensus 78 -~~pi--sIDT---------~~~~v~~aal~a~~Ga~iINdvs~~~-d~~~~~~~~~a~-~~~~vv~m~~d~~G~p~t-- 141 (271)
T 2yci_X 78 -DLPC--CLDS---------TNPDAIEAGLKVHRGHAMINSTSADQ-WKMDIFFPMAKK-YEAAIIGLTMNEKGVPKD-- 141 (271)
T ss_dssp -CCCE--EEEC---------SCHHHHHHHHHHCCSCCEEEEECSCH-HHHHHHHHHHHH-HTCEEEEESCBTTBCCCS--
T ss_pred -CCeE--EEeC---------CCHHHHHHHHHhCCCCCEEEECCCCc-cccHHHHHHHHH-cCCCEEEEecCCCCCCCC--
Confidence 4564 4532 22222222222222555443 55442 333444444433 3789999887 443211
Q ss_pred ccccccCCCCChHHHHHHHHHHHHcCCe
Q 025860 190 RKEWVQNTGVSDEDFVSYVSKWCEVGAS 217 (247)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 217 (247)
.... -+.+.+.+....+.|+.
T Consensus 142 ---~~~~----~~~l~~~~~~a~~~Gi~ 162 (271)
T 2yci_X 142 ---ANDR----SQLAMELVANADAHGIP 162 (271)
T ss_dssp ---HHHH----HHHHHHHHHHHHHTTCC
T ss_pred ---HHHH----HHHHHHHHHHHHHCCCC
Confidence 0000 12344555666778876
No 424
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=40.44 E-value=37 Score=28.32 Aligned_cols=31 Identities=16% Similarity=0.268 Sum_probs=21.4
Q ss_pred HHHHHhcCCCCE--EEEecCCCHHHHHHHHHHHHhh
Q 025860 78 RVQVLVESAPDL--IAFETIPNKIEAQAYAELLEEE 111 (247)
Q Consensus 78 q~~~l~~~gvD~--i~~ET~~~~~E~~aa~~~~~~~ 111 (247)
.++.+.++|+|. +-.|+-.+ ....++.+++.
T Consensus 84 ~i~~~~~aGAd~itvH~ea~~~---~~~~i~~i~~~ 116 (237)
T 3cu2_A 84 VAKAVVANGANLVTLQLEQYHD---FALTIEWLAKQ 116 (237)
T ss_dssp HHHHHHHTTCSEEEEETTCTTS---HHHHHHHHTTC
T ss_pred HHHHHHHcCCCEEEEecCCccc---HHHHHHHHHhc
Confidence 567788899999 66676554 44556666654
No 425
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=40.26 E-value=40 Score=29.00 Aligned_cols=36 Identities=8% Similarity=0.059 Sum_probs=15.3
Q ss_pred HHHHHHHHhcCCCCEEEEec--CCCHHHHHHHHHHHHhh
Q 025860 75 HRRRVQVLVESAPDLIAFET--IPNKIEAQAYAELLEEE 111 (247)
Q Consensus 75 ~~~q~~~l~~~gvD~i~~ET--~~~~~E~~aa~~~~~~~ 111 (247)
|.+++..++++|..++ +|- -.++.|++.+++++++.
T Consensus 94 H~~~~~~al~aGkhVl-~EKP~a~~~~e~~~l~~~a~~~ 131 (330)
T 4ew6_A 94 RYEAAYKALVAGKHVF-LEKPPGATLSEVADLEALANKQ 131 (330)
T ss_dssp HHHHHHHHHHTTCEEE-ECSSSCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCcEE-EeCCCCCCHHHHHHHHHHHHhc
Confidence 4444444444444433 242 22444444444444443
No 426
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=40.10 E-value=50 Score=28.74 Aligned_cols=63 Identities=11% Similarity=0.042 Sum_probs=35.1
Q ss_pred HhcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHH---HHHHHHhCCCCeEEEEcCC
Q 025860 82 LVESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLE---CASIAESCKRVVSVGINCT 156 (247)
Q Consensus 82 l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~---~~~~~~~~~~~~avG~NC~ 156 (247)
|.+..+|++++=| |+..-...+.++++. +++|++ .. + ...++++ +++..++......+|+|.-
T Consensus 84 l~~~~vD~V~I~t-p~~~H~~~~~~al~a---GkhVl~----EK-P---la~~~~ea~~l~~~a~~~g~~l~v~~~~R 149 (361)
T 3u3x_A 84 LEDENIGLIVSAA-VSSERAELAIRAMQH---GKDVLV----DK-P---GMTSFDQLAKLRRVQAETGRIFSILYSEH 149 (361)
T ss_dssp HTCTTCCEEEECC-CHHHHHHHHHHHHHT---TCEEEE----ES-C---SCSSHHHHHHHHHHHHTTCCCEEEECHHH
T ss_pred hcCCCCCEEEEeC-ChHHHHHHHHHHHHC---CCeEEE----eC-C---CCCCHHHHHHHHHHHHHcCCEEEEechHh
Confidence 3446799998766 444556777777764 467663 21 1 2334444 3443444333456777764
No 427
>2nq5_A 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; structural genomics, target 6426D, PSI; 1.90A {Streptococcus mutans} PDB: 3l7s_A 3l7r_A 3t0c_A
Probab=39.99 E-value=1.2e+02 Score=29.62 Aligned_cols=135 Identities=9% Similarity=0.088 Sum_probs=67.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCCEEEEecCCCHHH------------HHHHHHHHHhhCCCC--cEEEEEEEcCCCcccCCC
Q 025860 68 VETLKDFHRRRVQVLVESAPDLIAFETIPNKIE------------AQAYAELLEEENIKI--PAWFSFNSKDGVNVVSGD 133 (247)
Q Consensus 68 ~~e~~~~~~~q~~~l~~~gvD~i~~ET~~~~~E------------~~aa~~~~~~~~~~~--pv~is~~~~~~~~l~~G~ 133 (247)
.+++...+++.++.|.++|+++|-|-- |.+.+ ...++++++..-.++ ...+.+.+. -|.
T Consensus 565 ~~~lA~a~~~ei~~L~~aG~~~IQiDE-P~l~~~l~~~~~~~~~~~~~av~~l~~~~~~v~~~~~i~~HiC------~G~ 637 (755)
T 2nq5_A 565 FNQIGLAIKDEIKLLENAGIAIIQVDE-AALREGLPLRKSKQKAYLDDAVHAFHIATSSVKDETQIHTHMC------YSK 637 (755)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEEEEE-CCHHHHSCSSHHHHHHHHHHHHHHHHHHHSSSCTTSEEEEEEC------CSC
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEcC-CcccccccccCCCHHHHHHHHHHHHHHHHhcCCCCCeEEEEec------cCC
Confidence 356778899999999999999876532 22221 244556665532122 244444332 121
Q ss_pred cHHHHHHHHHhCCCCeEEEEcCCChhHHHHHHHHHHhhc-C--CCEEEEeCCCCcccccccccccCCCCChHHHHHHHHH
Q 025860 134 SLLECASIAESCKRVVSVGINCTPPRFISGLILIIKKVT-A--KPILIYPNSGEFYDADRKEWVQNTGVSDEDFVSYVSK 210 (247)
Q Consensus 134 ~~~~~~~~~~~~~~~~avG~NC~~p~~~~~~l~~l~~~~-~--~pl~vyPNaG~~~d~~~~~~~~~~~~~~~~~~~~~~~ 210 (247)
+..++..+.+ .++++|.+-..-+ . ...|+.+.+.. + +-++++ |... ....++++..+.+++
T Consensus 638 -~~~i~~~L~~-~~aD~islE~~rs-d-~e~L~~~~~~~~~~~v~lGvv-------d~~s-----~~ve~~eeV~~ri~~ 701 (755)
T 2nq5_A 638 -FDEIIDAIRA-LDADVISIETSRS-H-GDIIESFETAVYPLGIGLGVY-------DIHS-----PRVPTKEEVVANIER 701 (755)
T ss_dssp -CSTTHHHHHH-HCCSEEEC---------------------CEEEEECS-------CTTS-----SCCCCHHHHHHHHHG
T ss_pred -cHHHHHHHHh-CCCCEEEEecCCC-C-HHHHHHHHhccCCCeEEEeec-------cCcc-----CCCCCHHHHHHHHHH
Confidence 1123344444 4789999984322 2 23444443210 1 112222 2211 112468888888888
Q ss_pred HHHc-CCe--EEeecCCC
Q 025860 211 WCEV-GAS--LVGGCCRT 225 (247)
Q Consensus 211 ~~~~-G~~--iIGGCCGt 225 (247)
..+. |.. +|.=-||.
T Consensus 702 a~~~v~~e~l~lsPdCGl 719 (755)
T 2nq5_A 702 PLRQLSPTQFWVNPDCGL 719 (755)
T ss_dssp GGGSSCGGGEEEECSSCC
T ss_pred HHHhCCcccEEEeCCCCC
Confidence 7765 665 88888984
No 428
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=39.93 E-value=33 Score=29.66 Aligned_cols=26 Identities=19% Similarity=0.203 Sum_probs=13.7
Q ss_pred hcCCCCEEEEecCCCHHHHHHHHHHHH
Q 025860 83 VESAPDLIAFETIPNKIEAQAYAELLE 109 (247)
Q Consensus 83 ~~~gvD~i~~ET~~~~~E~~aa~~~~~ 109 (247)
.+..+|++++=|=++. -...++++++
T Consensus 91 ~~~~iDaV~IatP~~~-H~~~a~~al~ 116 (393)
T 4fb5_A 91 ADPEVDVVSVTTPNQF-HAEMAIAALE 116 (393)
T ss_dssp HCTTCCEEEECSCGGG-HHHHHHHHHH
T ss_pred cCCCCcEEEECCChHH-HHHHHHHHHh
Confidence 3455666666553333 3455555555
No 429
>1nq6_A XYS1; glycoside hydrolase family 10, xylanase, xylan degradation,, hydrolase; 1.78A {Streptomyces halstedii} SCOP: c.1.8.3
Probab=39.66 E-value=1.7e+02 Score=24.64 Aligned_cols=118 Identities=6% Similarity=0.027 Sum_probs=0.0
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHhc---CCCCEE--EEecCCCH----------------HHHHHHHHHHHhhCCCCc
Q 025860 58 YSGNYGDAITVETLKDFHRRRVQVLVE---SAPDLI--AFETIPNK----------------IEAQAYAELLEEENIKIP 116 (247)
Q Consensus 58 Y~g~y~~~~s~~e~~~~~~~q~~~l~~---~gvD~i--~~ET~~~~----------------~E~~aa~~~~~~~~~~~p 116 (247)
..+.+-...+.+++.+..+..++.++. ..|+.. +-|.+... +=++.+.+.+|+..++.+
T Consensus 87 ~~P~W~~~~~~~~~~~~~~~~i~~v~~ry~g~v~~WdV~NE~~~~~~~g~~r~s~~~~~~g~~~~~~af~~Ar~~dP~a~ 166 (302)
T 1nq6_A 87 QLPGWVSPLAATDLRSAMNNHITQVMTHYKGKIHSWDVVNEAFQDGGSGARRSSPFQDKLGNGFIEEAFRTARTVDADAK 166 (302)
T ss_dssp TCCTTTTTSCHHHHHHHHHHHHHHHHHHTTTSCSEEEEEECCBCSSSCCCBCCCHHHHHHCTTHHHHHHHHHHHHCTTSE
T ss_pred CCChhhhcCCHHHHHHHHHHHHHHHHHHcCCceEEEEeecCccccCCCCccccCHHHHhcCHHHHHHHHHHHHHhCCCCE
Q ss_pred EEEEEEEcCCCcccCCCcHHHHHHHHHhCCC--CeEEEEcCC-C-----hhHHHHHHHHHHhhcCCCEEE
Q 025860 117 AWFSFNSKDGVNVVSGDSLLECASIAESCKR--VVSVGINCT-P-----PRFISGLILIIKKVTAKPILI 178 (247)
Q Consensus 117 v~is~~~~~~~~l~~G~~~~~~~~~~~~~~~--~~avG~NC~-~-----p~~~~~~l~~l~~~~~~pl~v 178 (247)
+++. .......-..-..+.+.++.+.. .+ +|+||+|+- . |+.+...|+.+ ...++||.+
T Consensus 167 L~~N-dy~~~~~~~k~~~~~~~v~~l~~-~G~~iDgIG~q~H~~~~~~~~~~~~~~l~~~-a~~g~pi~i 233 (302)
T 1nq6_A 167 LCYN-DYNTDGQNAKSNAVYEMVKDFKQ-RGVPIDCVGFQSHFNSNSPVPSDFQANLQRF-ADLGVDVQI 233 (302)
T ss_dssp EEEE-ESSCSSSSHHHHHHHHHHHHHHH-HTCCCCEEEECCEEBTTBCCCTTHHHHHHHH-HTTTCEEEE
T ss_pred EEec-ccccccCchHHHHHHHHHHHHHH-CCCCcceEEEEEeecCCCCCHHHHHHHHHHH-HhcCCcEEE
No 430
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=39.62 E-value=1e+02 Score=22.08 Aligned_cols=74 Identities=5% Similarity=-0.064 Sum_probs=32.8
Q ss_pred cCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEEcCCChhHHHH
Q 025860 84 ESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGINCTPPRFISG 163 (247)
Q Consensus 84 ~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~NC~~p~~~~~ 163 (247)
+...|++++.....-.....+++.+++..++.|+++-. +..+.....+.+. .+++.+-..=..++.+..
T Consensus 64 ~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls---------~~~~~~~~~~~~~--~g~~~~l~Kp~~~~~l~~ 132 (150)
T 4e7p_A 64 KESVDIAILDVEMPVKTGLEVLEWIRSEKLETKVVVVT---------TFKRAGYFERAVK--AGVDAYVLKERSIADLMQ 132 (150)
T ss_dssp TSCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEE---------SCCCHHHHHHHHH--TTCSEEEETTSCHHHHHH
T ss_pred ccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEEe---------CCCCHHHHHHHHH--CCCcEEEecCCCHHHHHH
Confidence 34567777764322222333444445443345554322 1122233333332 356655554444555555
Q ss_pred HHHHH
Q 025860 164 LILII 168 (247)
Q Consensus 164 ~l~~l 168 (247)
.|+.+
T Consensus 133 ~i~~~ 137 (150)
T 4e7p_A 133 TLHTV 137 (150)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 54443
No 431
>2zsk_A PH1733, 226AA long hypothetical aspartate racemase; alpha/beta fold, unknown function; 2.55A {Pyrococcus horikoshii}
Probab=39.51 E-value=98 Score=24.89 Aligned_cols=130 Identities=18% Similarity=0.193 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHhcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCC
Q 025860 69 ETLKDFHRRRVQVLVESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRV 148 (247)
Q Consensus 69 ~e~~~~~~~q~~~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~ 148 (247)
+++.....+.++.|.+.|+|+|++=+.+ +-..++.+++.. ++|++ .+.++........+.
T Consensus 56 ~~~~~~l~~~~~~L~~~g~d~iviaCnT----a~~~~~~l~~~~-~iPvi---------------~i~~a~~~~~~~~~~ 115 (226)
T 2zsk_A 56 EGRKKILINAAKALERAGAELIAFAANT----PHLVFDDVQREV-NVPMV---------------SIIDAVAEEILKRGV 115 (226)
T ss_dssp HHHHHHHHHHHHHHHHHTCSEEEESSSG----GGGGHHHHHHHC-SSCBC---------------CHHHHHHHHHHHTTC
T ss_pred chHHHHHHHHHHHHHHcCCCEEEECCCc----HHHHHHHHHHhC-CCCEe---------------ccHHHHHHHHHHcCC
Q ss_pred eEEEEcCCChhHHHHHHHHHHhhcCCCEEEEeCCCCccccccccc--ccCCCC-ChHHHHHHHHHHHH-cCCeEE
Q 025860 149 VSVGINCTPPRFISGLILIIKKVTAKPILIYPNSGEFYDADRKEW--VQNTGV-SDEDFVSYVSKWCE-VGASLV 219 (247)
Q Consensus 149 ~avG~NC~~p~~~~~~l~~l~~~~~~pl~vyPNaG~~~d~~~~~~--~~~~~~-~~~~~~~~~~~~~~-~G~~iI 219 (247)
.-||+=.+....-....+..-...+..+. .|+.+....-....| ...... +.+.+.++++++.+ .|+..|
T Consensus 116 ~rigvlaT~~T~~~~~y~~~l~~~g~~v~-~~~~~~~~~v~~~i~~~~~~g~~~~~~~l~~~~~~l~~~~g~d~i 189 (226)
T 2zsk_A 116 RKVLLLGTKTTMTADFYIKTLEEKGLEVV-VPNDEEKEELNRIIFEELAFGNLKNKEWIVRLIEKYRESEGIEGV 189 (226)
T ss_dssp CEEEEESSTTTTSCHHHHHHHHTTTCEEE-CCCHHHHHHHHHHHHHTGGGTCCTTHHHHHHHHHHHHHHSCCSEE
T ss_pred CeEEEEeCHHHHhhhHHHHHHHHCCCEEE-ccCHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHhhcCCCEE
No 432
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=39.47 E-value=1.2e+02 Score=26.97 Aligned_cols=80 Identities=8% Similarity=-0.112 Sum_probs=47.0
Q ss_pred HHHHHH-hCCCCeEEEEcCCC---------h-------------------hHHHHHHHHHHhhcC-CCEEEEeCCCCccc
Q 025860 138 CASIAE-SCKRVVSVGINCTP---------P-------------------RFISGLILIIKKVTA-KPILIYPNSGEFYD 187 (247)
Q Consensus 138 ~~~~~~-~~~~~~avG~NC~~---------p-------------------~~~~~~l~~l~~~~~-~pl~vyPNaG~~~d 187 (247)
+++.+. + .|.|+|=|||.+ | ..+.++++.+++... .||++.-+....++
T Consensus 179 AA~~a~~~-aGfDgVEih~a~GYLl~QFlsp~~N~R~~D~yGG~slenR~r~~~eiv~aVr~avg~~~v~vRis~~~~~~ 257 (379)
T 3aty_A 179 GAKNAIFK-AGFDGVEIHGANGYLLDAFFRESSNKRQSGPYAGTTIDTRCQLIYDVTKSVCDAVGSDRVGLRISPLNGVH 257 (379)
T ss_dssp HHHHHHHT-SCCSEEEEEECTTSHHHHHHSTTTCCCCSSTTCTTSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCGG
T ss_pred HHHHHHHh-cCCCEEEEcCcCchHHhhccCCCCCccccCCCCccChhhhHHHHHHHHHHHHHhcCCCeEEEEECcccccc
Confidence 344444 4 689999999853 1 134555666666543 37888777642211
Q ss_pred ccccccccCCCCChHHHHHHHHHHHHcCCeEEeecCC
Q 025860 188 ADRKEWVQNTGVSDEDFVSYVSKWCEVGASLVGGCCR 224 (247)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~iIGGCCG 224 (247)
.... ..+.+++.+.++.+.+.|+.+|-=-++
T Consensus 258 ~~~~------~~~~~~~~~la~~l~~~Gvd~i~v~~~ 288 (379)
T 3aty_A 258 GMID------SNPEALTKHLCKKIEPLSLAYLHYLRG 288 (379)
T ss_dssp GCCC------SCHHHHHHHHHHHHGGGCCSEEEEECS
T ss_pred cCCC------CCCHHHHHHHHHHHHHhCCCEEEEcCC
Confidence 1101 123566777888787888777654443
No 433
>3ru6_A Orotidine 5'-phosphate decarboxylase; structural genomics, center for structural genomics of infec diseases (csgid), TIM-barrel; 1.80A {Campylobacter jejuni subsp}
Probab=39.18 E-value=1.1e+02 Score=26.46 Aligned_cols=117 Identities=13% Similarity=0.203 Sum_probs=68.7
Q ss_pred HHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEEcCC-ChhHHHHHHHHHHhhcCCCEE--E
Q 025860 102 QAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGINCT-PPRFISGLILIIKKVTAKPIL--I 178 (247)
Q Consensus 102 ~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~NC~-~p~~~~~~l~~l~~~~~~pl~--v 178 (247)
..+++.+++.. +.+++.-+-+.|- |.+...+++.+.+ .+++.+-+++. +++.|.++++..++..+.|.+ |
T Consensus 65 ~~~V~~Lk~~~-g~~IflDlKl~DI-----pnTv~~av~~~a~-lGaD~vTVHa~~G~~~m~aa~e~a~~~~~~~~llaV 137 (303)
T 3ru6_A 65 FKFIEELKKVD-DFKIFLDLKFHDI-----PNTMADACEEVSK-LGVDMINIHASAGKIAIQEVMTRLSKFSKRPLVLAV 137 (303)
T ss_dssp HHHHHHHHHHC-CCEEEEEEEECSC-----HHHHHHHHHHHHT-TTCSEEEEEGGGCHHHHHHHHHHHTTSSSCCEEEEE
T ss_pred HHHHHHHHHhh-CCCEEEEeeeccC-----chhHHHHHHHHHh-cCCCEEEEeccCCHHHHHHHHHHHHhcCCCceEEEE
Confidence 45566677653 5788888887664 4455667777766 68999999997 788788888777554344532 2
Q ss_pred --EeCCCCcccccccccc--cCCCCChH-HHHHHHHHHHHcCCeEEeecCCCChHHHHHHHHHh
Q 025860 179 --YPNSGEFYDADRKEWV--QNTGVSDE-DFVSYVSKWCEVGASLVGGCCRTTPNTIKGIYRTL 237 (247)
Q Consensus 179 --yPNaG~~~d~~~~~~~--~~~~~~~~-~~~~~~~~~~~~G~~iIGGCCGt~P~hI~al~~~l 237 (247)
....+. ..+. .. .+.. ...+.++.+.+.|+.-+ -| +|.+++.|++.+
T Consensus 138 tvLTS~s~------~~l~~l~~--~~~~e~V~~lA~~a~~~G~dGv--V~--s~~E~~~IR~~~ 189 (303)
T 3ru6_A 138 SALTSFDE------ENFFSIYR--QKIEEAVINFSKISYENGLDGM--VC--SVFESKKIKEHT 189 (303)
T ss_dssp CSCTTCCH------HHHHHHHS--SCHHHHHHHHHHHHHHTTCSEE--EC--CTTTHHHHHHHS
T ss_pred EEecCCCH------HHHHHHHc--CCHHHHHHHHHHHHHHcCCCEE--EE--CHHHHHHHHHhC
Confidence 111110 1110 11 1222 23455666677786432 23 566677777665
No 434
>3mqt_A Mandelate racemase/muconate lactonizing protein; PSI-II, NYSGXRC, muconate lactonizing EN structural genomics, protein structure initiative; 2.10A {Shewanella pealeana}
Probab=39.17 E-value=2e+02 Score=25.32 Aligned_cols=150 Identities=9% Similarity=-0.066 Sum_probs=84.5
Q ss_pred CHHHHHHHHHHHHHHHhcCCCCEEEE-ecC---CCHHHHHHHHHHHHhh-CCCCcEEEEEEEcCCCcccCCC-cHHHHHH
Q 025860 67 TVETLKDFHRRRVQVLVESAPDLIAF-ETI---PNKIEAQAYAELLEEE-NIKIPAWFSFNSKDGVNVVSGD-SLLECAS 140 (247)
Q Consensus 67 s~~e~~~~~~~q~~~l~~~gvD~i~~-ET~---~~~~E~~aa~~~~~~~-~~~~pv~is~~~~~~~~l~~G~-~~~~~~~ 140 (247)
+.+++.+.+.++++.+.+.|...|=+ =.- .++++-...++++|+. +.+.++.+-. ..|- ++.++++
T Consensus 148 ~~~~~i~~~~~~a~~~~~~G~~~~K~~k~g~~~~~~~~d~~~v~avR~a~G~d~~l~vDa--------n~~~~~~~~A~~ 219 (394)
T 3mqt_A 148 TLSEIVEAYKPLIAKAKERGAKAVKVCIIPNDKVSDKEIVAYLRELREVIGWDMDMMVDC--------LYRWTDWQKARW 219 (394)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCSEEEEECCCCTTSCHHHHHHHHHHHHHHHCSSSEEEEEC--------TTCCSCHHHHHH
T ss_pred chhhhHHHHHHHHHHHHHcCCCEEEecccCCCccCHHHHHHHHHHHHHHhCCCCeEEEEC--------CCCCCCHHHHHH
Confidence 56766666777888888889888766 222 3577777788888874 4566766532 2466 7888877
Q ss_pred HHHhC--CCCeEEEEcCCChhHHHHHHHHHHhhcCCCEEEEeCCCCccccc------ccccc-cCC-C-CChHHHHHHHH
Q 025860 141 IAESC--KRVVSVGINCTPPRFISGLILIIKKVTAKPILIYPNSGEFYDAD------RKEWV-QNT-G-VSDEDFVSYVS 209 (247)
Q Consensus 141 ~~~~~--~~~~avG~NC~~p~~~~~~l~~l~~~~~~pl~vyPNaG~~~d~~------~~~~~-~~~-~-~~~~~~~~~~~ 209 (247)
.++.. .+++.|==- ..|+. ...+..+++..+.||++==+....++.. .-+.. .+- . -...++.+.+.
T Consensus 220 ~~~~L~~~~i~~iEeP-~~~~~-~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~~ia~ 297 (394)
T 3mqt_A 220 TFRQLEDIDLYFIEAC-LQHDD-LIGHQKLAAAINTRLCGAEMSTTRFEAQEWLEKTGISVVQSDYNRCGGVTELLRIMD 297 (394)
T ss_dssp HHHHTGGGCCSEEESC-SCTTC-HHHHHHHHHHSSSEEEECTTCCHHHHHHHHHHHHCCSEECCCTTTSSCHHHHHHHHH
T ss_pred HHHHHhhcCCeEEECC-CCccc-HHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCCCCeEecCccccCCHHHHHHHHH
Confidence 66542 233333211 22333 3456777777888876432222111110 00111 000 0 12344555555
Q ss_pred HHHHcCCeEEeecCCCC
Q 025860 210 KWCEVGASLVGGCCRTT 226 (247)
Q Consensus 210 ~~~~~G~~iIGGCCGt~ 226 (247)
-....|+.+..||++++
T Consensus 298 ~A~~~gi~~~~h~~~s~ 314 (394)
T 3mqt_A 298 ICEHHNAQLMPHNWKTG 314 (394)
T ss_dssp HHHHHTCEECCCCCSCH
T ss_pred HHHHcCCEEeccCCCch
Confidence 55567999999998654
No 435
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=39.02 E-value=88 Score=27.95 Aligned_cols=15 Identities=13% Similarity=0.036 Sum_probs=9.4
Q ss_pred HHHHHhcCCCCEEEE
Q 025860 78 RVQVLVESAPDLIAF 92 (247)
Q Consensus 78 q~~~l~~~gvD~i~~ 92 (247)
.++.+.++|||.|.+
T Consensus 265 ~A~~a~~aGad~I~v 279 (392)
T 2nzl_A 265 DAREAVKHGLNGILV 279 (392)
T ss_dssp HHHHHHHTTCCEEEE
T ss_pred HHHHHHHcCCCEEEe
Confidence 455556667777766
No 436
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=38.98 E-value=95 Score=27.54 Aligned_cols=98 Identities=8% Similarity=-0.047 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHHHHhcCCCCEEEEecCCCHHHHH-HHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCC
Q 025860 69 ETLKDFHRRRVQVLVESAPDLIAFETIPNKIEAQ-AYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKR 147 (247)
Q Consensus 69 ~e~~~~~~~q~~~l~~~gvD~i~~ET~~~~~E~~-aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~ 147 (247)
+++...+. ++..+.|+-+.+=|....+++-. .-....+.. ++.|++.++.. +.+.+++.+.++. .+
T Consensus 102 ~~in~~lA---~~a~~~G~~~~vGs~~~~le~~~~~~~~v~r~~-P~~~~ianig~--------~~~~e~~~~~ve~-~~ 168 (365)
T 3sr7_A 102 KEVNEKLA---QVADTCGLLFVTGSYSTALKNPDDTSYQVKKSR-PHLLLATNIGL--------DKPYQAGLQAVRD-LQ 168 (365)
T ss_dssp HHHHHHHH---HHHHHHTCCEEC------------------------CCEEEEEET--------TSCHHHHHHHHHH-HC
T ss_pred hHHHHHHH---HHHHHcCCCeecccccccccCccccceEehhhC-CCCcEEEEeCC--------CCCHHHHHHHHHh-cC
Confidence 44444444 34445566555433333222222 222233444 47889888864 2345556555543 24
Q ss_pred Ce--EEEEcCC----------ChhHHHHHHHHHHhhcCCCEEEE
Q 025860 148 VV--SVGINCT----------PPRFISGLILIIKKVTAKPILIY 179 (247)
Q Consensus 148 ~~--avG~NC~----------~p~~~~~~l~~l~~~~~~pl~vy 179 (247)
++ .+-+|.. ..+.....|+.+++.+++|+++.
T Consensus 169 adal~ihln~~qe~~~p~Gd~~~~~~~~~I~~l~~~~~~PVivK 212 (365)
T 3sr7_A 169 PLFLQVHINLMQELLMPEGEREFRSWKKHLSDYAKKLQLPFILK 212 (365)
T ss_dssp CSCEEEEECHHHHHTSSSSCCCCHHHHHHHHHHHHHCCSCEEEE
T ss_pred CCEEEEeccccccccCCCCCCcHHHHHHHHHHHHHhhCCCEEEE
Confidence 44 4555541 11245678888888899999998
No 437
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=38.93 E-value=40 Score=28.80 Aligned_cols=79 Identities=11% Similarity=-0.017 Sum_probs=42.8
Q ss_pred CHHHHHHHHHHHHHHHhcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHH---HHHHHH
Q 025860 67 TVETLKDFHRRRVQVLVESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLE---CASIAE 143 (247)
Q Consensus 67 s~~e~~~~~~~q~~~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~---~~~~~~ 143 (247)
+.+++.+......+ .+..+|++++=|-+..+ ...+.++++. +++|+ |.. + ...++++ .++..+
T Consensus 55 ~~~~ll~~~~~l~~--~~~~vD~V~I~tP~~~H-~~~~~~al~a---GkhVl----~EK-P---la~~~~ea~~l~~~a~ 120 (312)
T 3o9z_A 55 EPEAFEAYLEDLRD--RGEGVDYLSIASPNHLH-YPQIRMALRL---GANAL----SEK-P---LVLWPEEIARLKELEA 120 (312)
T ss_dssp CHHHHHHHHHHHHH--TTCCCSEEEECSCGGGH-HHHHHHHHHT---TCEEE----ECS-S---SCSCHHHHHHHHHHHH
T ss_pred CHHHHHHHhhhhcc--cCCCCcEEEECCCchhh-HHHHHHHHHC---CCeEE----EEC-C---CCCCHHHHHHHHHHHH
Confidence 55666543322211 46789999988865544 5677777764 46666 222 1 2334444 333333
Q ss_pred hCCCCeEEEEcCC-Chh
Q 025860 144 SCKRVVSVGINCT-PPR 159 (247)
Q Consensus 144 ~~~~~~avG~NC~-~p~ 159 (247)
+......++.|.. .|.
T Consensus 121 ~~g~~~~v~~~~R~~p~ 137 (312)
T 3o9z_A 121 RTGRRVYTVLQLRVHPS 137 (312)
T ss_dssp HHCCCEEECCGGGGCHH
T ss_pred HcCCEEEEEeehhcCHH
Confidence 4333456777775 443
No 438
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=38.80 E-value=1e+02 Score=27.24 Aligned_cols=16 Identities=6% Similarity=0.065 Sum_probs=10.6
Q ss_pred HHHHHHhcCCCCEEEE
Q 025860 77 RRVQVLVESAPDLIAF 92 (247)
Q Consensus 77 ~q~~~l~~~gvD~i~~ 92 (247)
+-++.+.++|||.|.+
T Consensus 241 e~a~~a~~~Gad~I~v 256 (368)
T 2nli_A 241 EDADMAIKRGASGIWV 256 (368)
T ss_dssp HHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHcCCCEEEE
Confidence 3455566677777776
No 439
>1sgj_A Citrate lyase, beta subunit; trimer, TIM barrel, structural genomics, PSI, protein structure initiative; 1.84A {Deinococcus radiodurans} SCOP: c.1.12.5
Probab=38.71 E-value=49 Score=28.01 Aligned_cols=46 Identities=17% Similarity=0.280 Sum_probs=38.0
Q ss_pred HHHHHHHHhcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEE
Q 025860 75 HRRRVQVLVESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAWFSF 121 (247)
Q Consensus 75 ~~~q~~~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~ 121 (247)
+..+++.+++ |+|.|++=-+.+.+|++.+.+.++..+.++++++.+
T Consensus 83 ~~~dl~~~l~-g~~~i~lPkv~s~~~v~~~~~~l~~~g~~~~i~~~I 128 (284)
T 1sgj_A 83 FEDDLSVLTP-ELSGVVVPKLEMGAEARQVAQMLQERSLPLPILAGL 128 (284)
T ss_dssp HHHHGGGCCT-TSSEEEECSCCSHHHHHHHHHHHHHTTCCCCEEEEE
T ss_pred HHHHHHHHhc-cCCEEEeCCCCCHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 5567888888 999999999999999999999888754357777766
No 440
>1v5x_A PRA isomerase, phosphoribosylanthranilate isomerase; alpha-beta barrel, TRPF, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.1.2.4
Probab=38.36 E-value=1.4e+02 Score=23.97 Aligned_cols=73 Identities=15% Similarity=0.159 Sum_probs=42.3
Q ss_pred HHHHHhcCCCCEEEEecCC------CHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEE
Q 025860 78 RVQVLVESAPDLIAFETIP------NKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSV 151 (247)
Q Consensus 78 q~~~l~~~gvD~i~~ET~~------~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~av 151 (247)
.++...++|+|++-|--++ ++++++.+.+.+. ..+-.+.+.. ..+++++.+.+.. .+++.|
T Consensus 13 da~~a~~~GaD~iGfif~~~SpR~V~~~~a~~i~~~~~----~~~~~VgVfv--------n~~~~~i~~~~~~-~~ld~v 79 (203)
T 1v5x_A 13 DALLAEALGAFALGFVLAPGSRRRIAPEAARAIGEALG----PFVVRVGVFR--------DQPPEEVLRLMEE-ARLQVA 79 (203)
T ss_dssp HHHHHHHHTCSEEEEECCTTCTTBCCHHHHHHHHHHSC----SSSEEEEEES--------SCCHHHHHHHHHH-TTCSEE
T ss_pred HHHHHHHcCCCEEEEEecCCCCCcCCHHHHHHHHHhCC----CCCCEEEEEe--------CCCHHHHHHHHHh-hCCCEE
Confidence 3455667899999887544 4455555443332 1222333322 3456777776665 578888
Q ss_pred EEcCC-ChhHHHH
Q 025860 152 GINCT-PPRFISG 163 (247)
Q Consensus 152 G~NC~-~p~~~~~ 163 (247)
=+.-. +|+.+..
T Consensus 80 QLHG~e~~~~~~~ 92 (203)
T 1v5x_A 80 QLHGEEPPEWAEA 92 (203)
T ss_dssp EECSCCCHHHHHH
T ss_pred EECCCCCHHHHHH
Confidence 88654 4665544
No 441
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=38.34 E-value=50 Score=26.26 Aligned_cols=41 Identities=10% Similarity=0.166 Sum_probs=26.4
Q ss_pred HHHHHhcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEE
Q 025860 78 RVQVLVESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAWFSF 121 (247)
Q Consensus 78 q~~~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~ 121 (247)
.++.+.+.|+|.+.+=+... .+...+++.+++. +.++++++
T Consensus 76 ~i~~~~~~gad~v~vh~~~~-~~~~~~~~~~~~~--g~~i~~~~ 116 (220)
T 2fli_A 76 YVEAFAQAGADIMTIHTEST-RHIHGALQKIKAA--GMKAGVVI 116 (220)
T ss_dssp GHHHHHHHTCSEEEEEGGGC-SCHHHHHHHHHHT--TSEEEEEE
T ss_pred HHHHHHHcCCCEEEEccCcc-ccHHHHHHHHHHc--CCcEEEEE
Confidence 35667778999998843332 3344556666665 46777776
No 442
>3gwq_A D-serine deaminase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; HET: MSE; 2.00A {Burkholderia xenovorans LB400}
Probab=37.87 E-value=1.2e+02 Score=27.13 Aligned_cols=67 Identities=7% Similarity=0.102 Sum_probs=45.1
Q ss_pred CCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCc-HHH---HHHHHHhCC-CCeEEEEcCC
Q 025860 85 SAPDLIAFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDS-LLE---CASIAESCK-RVVSVGINCT 156 (247)
Q Consensus 85 ~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~-~~~---~~~~~~~~~-~~~avG~NC~ 156 (247)
.++|+ .-++.++++++.+-+.+++.+...+|++.+... .-+.|.. .++ +++.+.... ++...|+-|-
T Consensus 139 ~~~~l--~~~Vds~~~l~~L~~~a~~~~~~~~V~l~VdtG---~~R~Gv~~~~e~~~l~~~i~~~~~~l~l~Gl~th 210 (426)
T 3gwq_A 139 PEFEF--FCLVDSVEGVEQLGEFFKSVNKQLQVLLELGVP---GGRTGVRDAAQRNAVLEAITRYPDTLKLAGVELY 210 (426)
T ss_dssp TTCEE--EEEECCHHHHHHHHHHHHHTTCCEEEEEEECCT---TSSSSBCSHHHHHHHHHHHHTSTTTEEEEEEEEC
T ss_pred CCccE--EEEeCCHHHHHHHHHHHHHCCCeeEEEEEeCCC---CCcCCCCCHHHHHHHHHHHHcCCCCEEEEeEEEE
Confidence 45665 357888999998888887765556777777542 3456764 344 444455555 7888999984
No 443
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=37.85 E-value=1.1e+02 Score=27.04 Aligned_cols=98 Identities=14% Similarity=0.075 Sum_probs=55.8
Q ss_pred HHHHHHHHHHhcCCCCEEEEecCCCHHHHHHHHH-----------------HHHhh-CCCCcEEEEEEEcCCCcccCCCc
Q 025860 73 DFHRRRVQVLVESAPDLIAFETIPNKIEAQAYAE-----------------LLEEE-NIKIPAWFSFNSKDGVNVVSGDS 134 (247)
Q Consensus 73 ~~~~~q~~~l~~~gvD~i~~ET~~~~~E~~aa~~-----------------~~~~~-~~~~pv~is~~~~~~~~l~~G~~ 134 (247)
++|++..+...+.|++++ =|..+...+..+.+ ++++. ..++||++|- |. .+=+.
T Consensus 78 e~~~~L~~~~~~~Gi~~~--st~fD~~svd~l~~~~v~~~KI~S~~~~N~pLL~~va~~gKPviLst-----Gm-stl~E 149 (350)
T 3g8r_A 78 EQMQKLVAEMKANGFKAI--CTPFDEESVDLIEAHGIEIIKIASCSFTDWPLLERIARSDKPVVAST-----AG-ARRED 149 (350)
T ss_dssp HHHHHHHHHHHHTTCEEE--EEECSHHHHHHHHHTTCCEEEECSSSTTCHHHHHHHHTSCSCEEEEC-----TT-CCHHH
T ss_pred HHHHHHHHHHHHcCCcEE--eccCCHHHHHHHHHcCCCEEEECcccccCHHHHHHHHhhCCcEEEEC-----CC-CCHHH
Confidence 456656666666776655 35555555554432 12322 1368999886 22 12233
Q ss_pred HHHHHHHHHhCCCCeEEEEcCCC--h---hH-HHHHHHHHHhhc-CCCEEEEe
Q 025860 135 LLECASIAESCKRVVSVGINCTP--P---RF-ISGLILIIKKVT-AKPILIYP 180 (247)
Q Consensus 135 ~~~~~~~~~~~~~~~avG~NC~~--p---~~-~~~~l~~l~~~~-~~pl~vyP 180 (247)
+..+++.+... +...+.+-|+. | +. =+..+..|++.. +.|++ |+
T Consensus 150 i~~Ave~i~~~-g~~viLlhC~s~YPt~~~~~nL~aI~~Lk~~fp~lpVG-~S 200 (350)
T 3g8r_A 150 IDKVVSFMLHR-GKDLTIMHCVAEYPTPDDHLHLARIKTLRQQYAGVRIG-YS 200 (350)
T ss_dssp HHHHHHHHHTT-TCCEEEEECCCCSSCCGGGCCTTHHHHHHHHCTTSEEE-EE
T ss_pred HHHHHHHHHHc-CCCEEEEecCCCCCCCcccCCHHHHHHHHHHCCCCCEE-cC
Confidence 44566666653 45788888963 2 22 255677777777 78875 55
No 444
>2xed_A Putative maleate isomerase; nicotinic acid catabolism, cofactor-independent CIS-trans isomerase; 1.95A {Nocardia farcinica} PDB: 2xec_A
Probab=37.85 E-value=41 Score=28.40 Aligned_cols=44 Identities=7% Similarity=-0.022 Sum_probs=31.6
Q ss_pred CcHHHHHHHHHhCCCCeEEEEcCCC------hhHHHHHHHHHHhhc-----CCCEE
Q 025860 133 DSLLECASIAESCKRVVSVGINCTP------PRFISGLILIIKKVT-----AKPIL 177 (247)
Q Consensus 133 ~~~~~~~~~~~~~~~~~avG~NC~~------p~~~~~~l~~l~~~~-----~~pl~ 177 (247)
..+.++++.+.+ .++++|.+.|+. ++.+.++++.+++.. +.|++
T Consensus 77 ~~l~~aa~~L~~-~g~d~IviaCnta~~~~G~~~~~~~~~~l~~~~~~~~~~iPv~ 131 (273)
T 2xed_A 77 AQRERCVLEIAD-AAPEVILYACLVAVMVGGPGEHHRVESAVAEQLATGGSQALVR 131 (273)
T ss_dssp TTHHHHHHHHHT-TCCSEEEECCHHHHHTTCTTHHHHHHHHHHHHHHHTTCCCEEE
T ss_pred HHHHHHHHHHhh-cCCCEEEECCChHHHhcccchhHHHHHHHHHHhhccCCCCCEe
Confidence 345677777776 589999999953 233566777777776 78865
No 445
>2ffc_A Orotidine 5-monophosphate decarboxylase; PV-PF10_0225, SGC, structural genomics, struc genomics consortium, lyase; HET: U5P; 1.70A {Plasmodium vivax} SCOP: c.1.2.3 PDB: 2guu_A*
Probab=37.57 E-value=47 Score=29.56 Aligned_cols=88 Identities=11% Similarity=0.050 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHhcCCCCEE-----EEecCCC--HHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHh
Q 025860 72 KDFHRRRVQVLVESAPDLI-----AFETIPN--KIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAES 144 (247)
Q Consensus 72 ~~~~~~q~~~l~~~gvD~i-----~~ET~~~--~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~ 144 (247)
.+|-+..++.+.+ .|+++ +||.... +..++..++.+++. +.+|+.-+-+.|- |.+...+++.+..
T Consensus 115 ~~f~~~ivdal~~-~v~~vKvg~~lfea~G~~gi~~L~~~v~~lr~~--g~~VflDlK~~DI-----gnTva~ya~a~~~ 186 (353)
T 2ffc_A 115 NHFCFYIINETKE-YALAYKMNFAFYLPYGSLGVDVLKNVFDYLHHL--NVPTILDIKMNDI-----GNTVKHYRKFIFD 186 (353)
T ss_dssp HHHHHHHHHHHGG-GCSEEEEEGGGGSTTTHHHHHHHHHHHHHHHHH--TCCEEEEEEECCC-----HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcc-ccceeeccHHHHHhcCHHHHHHHHHHHHHHHHc--CCcEEEEEecCch-----HHHHHHHHHHHHH
Confidence 6777777777753 46664 3444432 33455557777776 5899998888664 4456667766642
Q ss_pred CCCCeEEEEcCC-ChhHHHHHHHH
Q 025860 145 CKRVVSVGINCT-PPRFISGLILI 167 (247)
Q Consensus 145 ~~~~~avG~NC~-~p~~~~~~l~~ 167 (247)
..++|+|-+++. +.+.|.++++.
T Consensus 187 ~lgaD~vTVhp~~G~dsl~~a~~~ 210 (353)
T 2ffc_A 187 YLRSDSCTANIYMGTQMLRDICLD 210 (353)
T ss_dssp TSCCSEEEECCTTCSTTHHHHHBC
T ss_pred HcCCCEEEEeCCCCHHHHHHHHHH
Confidence 268999999997 67777777743
No 446
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=37.52 E-value=2.2e+02 Score=25.33 Aligned_cols=110 Identities=6% Similarity=-0.014 Sum_probs=62.9
Q ss_pred HHHHHHHHHHHHHHHhcCCCCEEEEecC----------C-----------CH-HHHH---HHHHHHHhhCCCCcEEEEEE
Q 025860 68 VETLKDFHRRRVQVLVESAPDLIAFETI----------P-----------NK-IEAQ---AYAELLEEENIKIPAWFSFN 122 (247)
Q Consensus 68 ~~e~~~~~~~q~~~l~~~gvD~i~~ET~----------~-----------~~-~E~~---aa~~~~~~~~~~~pv~is~~ 122 (247)
.+++.+.|.+-++.+.++|.|.|=+--- | ++ ..++ .+++++++.-.+.||.+-++
T Consensus 166 I~~ii~~f~~AA~~a~~AGfDgVEIh~ahGYLl~QFLsp~~N~RtD~yGGslenR~rf~~Eiv~aVr~avg~~~V~vRls 245 (402)
T 2hsa_B 166 ISQVVEDYRRSALNAIEAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSLANRCKFITQVVQAVVSAIGADRVGVRVS 245 (402)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEECCccchHHHhccCCccCccCCccCcChhhhhHHHHHHHHHHHHHhCCCcEEEEec
Confidence 4566678888888888999999855431 1 11 2333 44555555321238888776
Q ss_pred EcCCC-cccCCCcHHHH---HHHHHhCCC------CeEEEEcCC-------Ch------h-HHHHHHHHHHhhcCCCEEE
Q 025860 123 SKDGV-NVVSGDSLLEC---ASIAESCKR------VVSVGINCT-------PP------R-FISGLILIIKKVTAKPILI 178 (247)
Q Consensus 123 ~~~~~-~l~~G~~~~~~---~~~~~~~~~------~~avG~NC~-------~p------~-~~~~~l~~l~~~~~~pl~v 178 (247)
..+.. ...+|.+++++ ++.+.+ .+ ++.|=+-.. .| . .-...++.+++..+.||++
T Consensus 246 ~~~~~~g~~~~~~~~~~~~la~~le~-~G~~gg~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vk~~~~iPvi~ 324 (402)
T 2hsa_B 246 PAIDHLDAMDSNPLSLGLAVVERLNK-IQLHSGSKLAYLHVTQPRYVAYGQTEAGRLGSEEEEARLMRTLRNAYQGTFIC 324 (402)
T ss_dssp SSCCSTTCCCSCHHHHHHHHHHHHHH-HHHHHTSCCSEEEEECCCCCTTTTSSSTTTTHHHHHHHHHHHHHHHCSSCEEE
T ss_pred cccccCCCCCCCCHHHHHHHHHHHHh-cCCccCCceEEEEEecCccccccCCccccccCCcchHHHHHHHHHHCCCCEEE
Confidence 54321 12345555554 444444 35 776666321 12 1 1245677788888889764
No 447
>1nns_A L-asparaginase II; amidrohydrolase, crystallographic comparison hydrolase; 1.95A {Escherichia coli} SCOP: c.88.1.1 PDB: 3eca_A 1ho3_A 1jaz_A 1ihd_A 1jja_A 4eca_A*
Probab=37.34 E-value=76 Score=27.66 Aligned_cols=49 Identities=14% Similarity=0.024 Sum_probs=33.6
Q ss_pred HHHHHhcCCCCEEEEecCCCH---HHHHHHHHHHHhhCCCCcEEEEEEEcCCCc
Q 025860 78 RVQVLVESAPDLIAFETIPNK---IEAQAYAELLEEENIKIPAWFSFNSKDGVN 128 (247)
Q Consensus 78 q~~~l~~~gvD~i~~ET~~~~---~E~~aa~~~~~~~~~~~pv~is~~~~~~~~ 128 (247)
.++.+++.|++.|++|++..- .++..+++-+.+. ++||+++-.|..+..
T Consensus 227 ~l~~~~~~g~~GiVl~~~G~Gn~p~~~~~~l~~a~~~--gi~VV~~Sr~~~G~v 278 (326)
T 1nns_A 227 PAKALVDAGYDGIVSAGVGNGNLYKSVFDTLATAAKT--GTAVVRSSRVPTGAT 278 (326)
T ss_dssp HHHHHHHTTCSEEEEEEBTTTBCCHHHHHHHHHHHHT--TCEEEEEESSSSSCB
T ss_pred HHHHHHhCCCCEEEEeeECCCCCCHHHHHHHHHHHHC--CCEEEEECCCCCCCc
Confidence 566677789999999998753 4444545444443 589988887765443
No 448
>1vfs_A Alanine racemase; TIM-barrel, greek-KEY motief, isomerase; HET: KCX DCS; 1.90A {Streptomyces lavendulae} SCOP: b.49.2.2 c.1.6.1 PDB: 1vfh_A* 1vft_A*
Probab=36.75 E-value=76 Score=27.88 Aligned_cols=60 Identities=8% Similarity=-0.040 Sum_probs=41.5
Q ss_pred ecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHH------HHHHHhCCCCeEEEEcC
Q 025860 93 ETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLEC------ASIAESCKRVVSVGINC 155 (247)
Q Consensus 93 ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~------~~~~~~~~~~~avG~NC 155 (247)
-++.|+++++.+-+.+++.+...+|++.+.. +.-+.|.+.+++ ++.+....++...|+-|
T Consensus 102 ~~vds~~~l~~l~~~a~~~~~~~~V~l~vdt---G~~R~G~~~~e~~~~~~~~~~i~~~~~l~l~Gl~t 167 (386)
T 1vfs_A 102 VSVSGMWALDEVRAAARAAGRTARIQLKADT---GLGRNGCQPADWAELVGAAVAAQAEGTVQVTGVWS 167 (386)
T ss_dssp EEECSHHHHHHHHHHHHHHTSCEEEEEEBCS---SCCSSSBCHHHHHHHHHHHHHHHHTTSEEEEEEEC
T ss_pred EEECCHHHHHHHHHHHHhcCCceEEEEEEcC---CCCCCCCCHhHHHHHHHHHHHHHhCCCceEEEEEe
Confidence 3788899999888877766544567766643 345678877654 45455545788889876
No 449
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=36.71 E-value=2.2e+02 Score=24.98 Aligned_cols=152 Identities=9% Similarity=0.042 Sum_probs=82.3
Q ss_pred CHHHHHHHHHHHHHHHhcCCCCEEEEecCCC-HHHHHHHHHHHHh-hCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHh
Q 025860 67 TVETLKDFHRRRVQVLVESAPDLIAFETIPN-KIEAQAYAELLEE-ENIKIPAWFSFNSKDGVNVVSGDSLLECASIAES 144 (247)
Q Consensus 67 s~~e~~~~~~~q~~~l~~~gvD~i~~ET~~~-~~E~~aa~~~~~~-~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~ 144 (247)
+.+++. ++++.+.+.|.|.|=+=.-.+ +++....++++|+ .+.+.++.+.. ..|-+++++++.++.
T Consensus 149 ~~~~~~----~~a~~~~~~Gf~~vKik~g~~~~~~~~e~v~avR~a~G~d~~l~vDa--------n~~~~~~~a~~~~~~ 216 (391)
T 2qgy_A 149 DTNDYL----RQIEKFYGKKYGGIKIYPMLDSLSISIQFVEKVREIVGDELPLMLDL--------AVPEDLDQTKSFLKE 216 (391)
T ss_dssp CHHHHH----HHHHHHHHTTCSCEEECCCCSSHHHHHHHHHHHHHHHCSSSCEEEEC--------CCCSCHHHHHHHHHH
T ss_pred CHHHHH----HHHHHHHHcCCCEEEEccCCChHHHHHHHHHHHHHHhCCCCEEEEEc--------CCCCCHHHHHHHHHH
Confidence 455543 356666677877775432223 5777778888887 45567777533 146677877766543
Q ss_pred --CCCCeEEEEcCCChhHHHHHHHHHHhhcCCCEEEEeCCCCccccc------ccccc-cC--CCCChHHHHHHHHHHHH
Q 025860 145 --CKRVVSVGINCTPPRFISGLILIIKKVTAKPILIYPNSGEFYDAD------RKEWV-QN--TGVSDEDFVSYVSKWCE 213 (247)
Q Consensus 145 --~~~~~avG~NC~~p~~~~~~l~~l~~~~~~pl~vyPNaG~~~d~~------~~~~~-~~--~~~~~~~~~~~~~~~~~ 213 (247)
..+++.|==-|. ++. ...++.+++..+.||+.==+...+.+.. .-+.. .+ ..-+..++.+.+.-..+
T Consensus 217 l~~~~i~~iEqP~~-~~d-~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~ 294 (391)
T 2qgy_A 217 VSSFNPYWIEEPVD-GEN-ISLLTEIKNTFNMKVVTGEKQSGLVHFRELISRNAADIFNPDISGMGGLIDIIEISNEASN 294 (391)
T ss_dssp HGGGCCSEEECSSC-TTC-HHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECCBTTTSSCHHHHHHHHHHHHH
T ss_pred HHhcCCCeEeCCCC-hhh-HHHHHHHHhhCCCCEEEcCCcCCHHHHHHHHHcCCCCEEEECcchhCCHHHHHHHHHHHHH
Confidence 134554432222 222 3456667777788976533222111110 00111 10 00134556666666677
Q ss_pred cCCeEEeecCCCChHHHHH
Q 025860 214 VGASLVGGCCRTTPNTIKG 232 (247)
Q Consensus 214 ~G~~iIGGCCGt~P~hI~a 232 (247)
.|+.+.-||+.+++=-+.+
T Consensus 295 ~gi~~~~~~~~~~~i~~aa 313 (391)
T 2qgy_A 295 NGIFISPHCWNSMSVSASA 313 (391)
T ss_dssp TTCEECCBCCSCTTHHHHH
T ss_pred CCCEEeccCCCCcHHHHHH
Confidence 8999999999653544443
No 450
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=36.68 E-value=1.1e+02 Score=21.50 Aligned_cols=77 Identities=8% Similarity=-0.019 Sum_probs=42.4
Q ss_pred hcCCCCEEEEecCCCH--HHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEEcCCChhH
Q 025860 83 VESAPDLIAFETIPNK--IEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGINCTPPRF 160 (247)
Q Consensus 83 ~~~gvD~i~~ET~~~~--~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~NC~~p~~ 160 (247)
.+...|+++++....- .....+++.+++..++.|+++-- .-.+.....+.+. .|++.+-.-=..++.
T Consensus 47 ~~~~~dlvi~D~~l~~~~~~g~~~~~~l~~~~~~~~ii~~s---------~~~~~~~~~~~~~--~ga~~~l~KP~~~~~ 115 (136)
T 3kto_A 47 ISDDAIGMIIEAHLEDKKDSGIELLETLVKRGFHLPTIVMA---------SSSDIPTAVRAMR--ASAADFIEKPFIEHV 115 (136)
T ss_dssp CCTTEEEEEEETTGGGBTTHHHHHHHHHHHTTCCCCEEEEE---------SSCCHHHHHHHHH--TTCSEEEESSBCHHH
T ss_pred hccCCCEEEEeCcCCCCCccHHHHHHHHHhCCCCCCEEEEE---------cCCCHHHHHHHHH--cChHHheeCCCCHHH
Confidence 3455799998854323 33445555666655567766432 1223344444443 367776655445666
Q ss_pred HHHHHHHHHh
Q 025860 161 ISGLILIIKK 170 (247)
Q Consensus 161 ~~~~l~~l~~ 170 (247)
+...++.+..
T Consensus 116 l~~~i~~~~~ 125 (136)
T 3kto_A 116 LVHDVQQIIN 125 (136)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 6666665543
No 451
>2vws_A YFAU, 2-keto-3-deoxy sugar aldolase; lyase, escherichia coli K-12 protein YFAU, 2-keto-3-deoxy SU aldolase, degradation of homoprotocatechuate; 1.39A {Escherichia coli} PDB: 2vwt_A
Probab=36.57 E-value=1.9e+02 Score=24.14 Aligned_cols=78 Identities=5% Similarity=-0.119 Sum_probs=47.9
Q ss_pred HHHHHhcCCCCEEEEec---CCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEEc
Q 025860 78 RVQVLVESAPDLIAFET---IPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGIN 154 (247)
Q Consensus 78 q~~~l~~~gvD~i~~ET---~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~N 154 (247)
.++.+...|.|++++.. ..+..++...+..++.. +.++||-+. +.+..++ +.+.+ .++++|-+-
T Consensus 31 ~~e~a~~~GaD~v~lDlE~~~~~~~~~~~~~~a~~~~--~~~~~VRv~---------~~~~~~i-~~~l~-~g~~~I~~P 97 (267)
T 2vws_A 31 MAEIAATSGYDWLLIDGEHAPNTIQDLYHQLQAVAPY--ASQPVIRPV---------EGSKPLI-KQVLD-IGAQTLLIP 97 (267)
T ss_dssp HHHHHHTTCCSEEEEETTTSCCCHHHHHHHHHHHTTS--SSEEEEECS---------SCCHHHH-HHHHH-TTCCEEEEC
T ss_pred HHHHHHhCCCCEEEEcCCCCCCCHHHHHHHHHHHHhC--CCcEEEEeC---------CCCHHHH-HHHHH-hCCCEEEeC
Confidence 34556678999999874 34444555555544332 467776652 2233444 33444 478888887
Q ss_pred CC-ChhHHHHHHHHH
Q 025860 155 CT-PPRFISGLILII 168 (247)
Q Consensus 155 C~-~p~~~~~~l~~l 168 (247)
-+ +++.+..+++.+
T Consensus 98 ~V~s~ee~~~~~~~~ 112 (267)
T 2vws_A 98 MVDTAEQARQVVSAT 112 (267)
T ss_dssp CCCSHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHH
Confidence 76 788887777665
No 452
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=36.31 E-value=1.6e+02 Score=25.32 Aligned_cols=95 Identities=13% Similarity=0.068 Sum_probs=54.8
Q ss_pred HHHHHHHhCCCCeEEEEcCC--ChhHHHHHHHHHHhhc--CCCEEEEeCCCCccccc----------ccccccCCCCChH
Q 025860 137 ECASIAESCKRVVSVGINCT--PPRFISGLILIIKKVT--AKPILIYPNSGEFYDAD----------RKEWVQNTGVSDE 202 (247)
Q Consensus 137 ~~~~~~~~~~~~~avG~NC~--~p~~~~~~l~~l~~~~--~~pl~vyPNaG~~~d~~----------~~~~~~~~~~~~~ 202 (247)
+.+..+.+ .+.++|=+++. +++.....++.+++.. +.+|.+-.|.|...+.. .-.|..+ .+.++
T Consensus 150 ~~a~~~~~-~Gf~~iKik~g~~~~~~~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iE~-P~~~~ 227 (359)
T 1mdl_A 150 ERAVTAAE-LGFRAVKTRIGYPALDQDLAVVRSIRQAVGDDFGIMVDYNQSLDVPAAIKRSQALQQEGVTWIEE-PTLQH 227 (359)
T ss_dssp HHHHHHHH-TTCSEEEEECCCSSHHHHHHHHHHHHHHHCSSSEEEEECTTCSCHHHHHHHHHHHHHHTCSCEEC-CSCTT
T ss_pred HHHHHHHH-cCCCEEEEecCCCCHHHHHHHHHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHHHHhCCCeEEC-CCChh
Confidence 33444444 47899999886 4677778888887764 68899999987521110 1123322 12232
Q ss_pred HHHHHHHHHHH-cCCeEEeecCCCChHHHHHHH
Q 025860 203 DFVSYVSKWCE-VGASLVGGCCRTTPNTIKGIY 234 (247)
Q Consensus 203 ~~~~~~~~~~~-~G~~iIGGCCGt~P~hI~al~ 234 (247)
.+.. .+++.+ .++.|+++=.=++++.++.+-
T Consensus 228 ~~~~-~~~l~~~~~iPI~~de~~~~~~~~~~~i 259 (359)
T 1mdl_A 228 DYEG-HQRIQSKLNVPVQMGENWLGPEEMFKAL 259 (359)
T ss_dssp CHHH-HHHHHHTCSSCEEECTTCCSHHHHHHHH
T ss_pred hHHH-HHHHHHhCCCCEEeCCCCCCHHHHHHHH
Confidence 2222 223332 367777665556787776653
No 453
>3mwd_A ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_A*
Probab=36.24 E-value=72 Score=29.00 Aligned_cols=70 Identities=11% Similarity=0.139 Sum_probs=50.0
Q ss_pred CCHHHHHHHHHHHHHHHh-cCCCCEEEEecCC---CHHH-H---HHHHHHHHhh-----CCCCcEEEEEEEcCCCcccCC
Q 025860 66 ITVETLKDFHRRRVQVLV-ESAPDLIAFETIP---NKIE-A---QAYAELLEEE-----NIKIPAWFSFNSKDGVNVVSG 132 (247)
Q Consensus 66 ~s~~e~~~~~~~q~~~l~-~~gvD~i~~ET~~---~~~E-~---~aa~~~~~~~-----~~~~pv~is~~~~~~~~l~~G 132 (247)
.+.+.+++..+..++.+. +..|+.+++--+. +-.+ + +.+++++++. ..++|+++-+ .|
T Consensus 311 a~~e~v~~~~~~~l~ii~~d~~vk~i~vnIfGGI~~cd~vA~t~~GIi~A~~~~~~~~~~~~~PivVRl---------~G 381 (425)
T 3mwd_A 311 PSEQQTYDYAKTILSLMTREKHPDGKILIIGGSIANFTNVAATFKGIVRAIRDYQGPLKEHEVTIFVRR---------GG 381 (425)
T ss_dssp CCHHHHHHHHHHHHHHTTSSCCTTCEEEEECBCBCSSSCHHHHHHHHHHHHHHTHHHHHHTTEEEEEEC---------BS
T ss_pred CCHHHHHHHHHHHHHHHhcCCCCCEEEEEecCCcccHHHHHHHHhHHHHHHHHhhhccccCCCcEEEEC---------Cc
Confidence 578888888777777764 4778888765432 2222 3 6788888874 3468998766 68
Q ss_pred CcHHHHHHHHHh
Q 025860 133 DSLLECASIAES 144 (247)
Q Consensus 133 ~~~~~~~~~~~~ 144 (247)
+..++..+.+++
T Consensus 382 tn~~eg~~il~~ 393 (425)
T 3mwd_A 382 PNYQEGLRVMGE 393 (425)
T ss_dssp TTHHHHHHHHHH
T ss_pred CCHHHHHHHHHh
Confidence 999988888775
No 454
>2bmb_A Folic acid synthesis protein FOL1; folate biosynthesis, transferase, ligase, multifunctional enzyme; HET: PMM; 2.3A {Saccharomyces cerevisiae}
Probab=36.17 E-value=2.5e+02 Score=26.41 Aligned_cols=125 Identities=14% Similarity=0.141 Sum_probs=72.0
Q ss_pred CCeEEEEecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCC-----CCEEEEecCC---------CHHHHH
Q 025860 37 RPILVAASVGSYGAYLADGSEYSGNYGDAITVETLKDFHRRRVQVLVESA-----PDLIAFETIP---------NKIEAQ 102 (247)
Q Consensus 37 ~~~~VaGsiGP~g~~l~~g~eY~g~y~~~~s~~e~~~~~~~q~~~l~~~g-----vD~i~~ET~~---------~~~E~~ 102 (247)
.+.+|.|-+--+-.++.||..|.. +.+.+.+ +++.+++.| +|+|=+--.+ .-+|++
T Consensus 223 ~~~~iMGIlNvTPDSFsDGG~~~~------~~~~al~----~a~~mv~~G~~~~~AdIIDIGgeSTRPGa~~vs~eEEl~ 292 (545)
T 2bmb_A 223 SPTYIMAIFNATPDSFSDGGEHFA------DIESQLN----DIIKLCKDALYLHESVIIDVGGCSTRPNSIQASEEEEIR 292 (545)
T ss_dssp SCCEEEEEEECSCSSTTTTTTTTT------CHHHHHH----HHHHHHHHHHTTCSCEEEEEECSCCSTTCCCCCHHHHHH
T ss_pred CCCeEEEEEeCCCCCCcCCCcCcC------CHHHHHH----HHHHHHHcCCCCCCceEEEECCCCCCCCCCCCCHHHHHH
Confidence 346788877777777888765421 4566655 666677789 9998666322 255665
Q ss_pred HHHHHHHhhC----CC-CcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEE-EcCCC-hhHHHHHHHHHHhhcCCC
Q 025860 103 AYAELLEEEN----IK-IPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVG-INCTP-PRFISGLILIIKKVTAKP 175 (247)
Q Consensus 103 aa~~~~~~~~----~~-~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG-~NC~~-p~~~~~~l~~l~~~~~~p 175 (247)
-++.+++..- +. ..+.+|+.... .++++...+ .|++.|- |+... -+.| ++.+++..+.|
T Consensus 293 RvvpvI~~i~~~~~~~~~~vpISIDT~~----------a~VaeaAl~-aGadIINDVsg~~~d~~m---~~vva~~~~~~ 358 (545)
T 2bmb_A 293 RSIPLIKAIRESTELPQDKVILSIDTYR----------SNVAKEAIK-VGVDIINDISGGLFDSNM---FAVIAENPEIC 358 (545)
T ss_dssp HHHHHHHHHHHCSSSCGGGEEEEEECCC----------HHHHHHHHH-TTCCEEEETTTTSSCTTH---HHHHHTCTTSE
T ss_pred HHHHHHHHHHhhccccCCCCeEEEeCCc----------HHHHHHHHH-cCCCEEEeCCCCcCChHH---HHHHHHhCCCe
Confidence 5544444321 01 36788885322 445555544 3666542 33331 2233 33333333789
Q ss_pred EEEEeCCCCc
Q 025860 176 ILIYPNSGEF 185 (247)
Q Consensus 176 l~vyPNaG~~ 185 (247)
+++.-+.|.+
T Consensus 359 vVlmH~rG~p 368 (545)
T 2bmb_A 359 YILSHTRGDI 368 (545)
T ss_dssp EEEECCCSCT
T ss_pred EEEECCCCCC
Confidence 9999887754
No 455
>4gvf_A Beta-hexosaminidase; TIM-barrel, hydrolase; HET: NDG NAG MES; 1.35A {Salmonella enterica subsp} PDB: 4gvg_A* 4gvh_A* 4gvi_A*
Probab=36.16 E-value=44 Score=29.64 Aligned_cols=50 Identities=16% Similarity=0.177 Sum_probs=34.5
Q ss_pred CCCcHHHH-HHHHHhCCCCeEEEE---cCCChhHHHHHHHHHHhhcCCCEEEEeC
Q 025860 131 SGDSLLEC-ASIAESCKRVVSVGI---NCTPPRFISGLILIIKKVTAKPILIYPN 181 (247)
Q Consensus 131 ~G~~~~~~-~~~~~~~~~~~avG~---NC~~p~~~~~~l~~l~~~~~~pl~vyPN 181 (247)
.|+.+.+- .+.+.+ ..+-+|-+ |..+|+.+..+++.+++..+.|+++--+
T Consensus 9 ~G~~l~~~~~~~i~~-~~vGGvilf~rN~~~~~q~~~l~~~lq~~~~iPlli~vD 62 (349)
T 4gvf_A 9 EGCELDAEEREILAH-PLVGGLILFTRNYHDPEQLRELVRQIRAASRNHLVVAVD 62 (349)
T ss_dssp SSSSCCHHHHHHHTC-TTEEEEEECGGGCSCHHHHHHHHHHHHHHCSSCCEEEEC
T ss_pred CCCCCCHHHHHHHHc-CCceEEEEeCCCCCCHHHHHHHHHHHHHhcCCCceeeec
Confidence 45554443 444444 56666655 8889999999999999888888655444
No 456
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=36.07 E-value=45 Score=29.03 Aligned_cols=36 Identities=17% Similarity=0.282 Sum_probs=19.2
Q ss_pred HHHHHHHHhcCCCCEEEEec--CCCHHHHHHHHHHHHhh
Q 025860 75 HRRRVQVLVESAPDLIAFET--IPNKIEAQAYAELLEEE 111 (247)
Q Consensus 75 ~~~q~~~l~~~gvD~i~~ET--~~~~~E~~aa~~~~~~~ 111 (247)
|.+++..++++|.++|+ |- -.++.|++.+++++++.
T Consensus 80 H~~~~~~al~aGk~Vl~-EKPla~~~~e~~~l~~~a~~~ 117 (364)
T 3e82_A 80 HAPLARLALNAGKHVVV-DKPFTLDMQEARELIALAEEK 117 (364)
T ss_dssp HHHHHHHHHHTTCEEEE-CSCSCSSHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHCCCcEEE-eCCCcCCHHHHHHHHHHHHHh
Confidence 45555555555655433 54 44555666655555554
No 457
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=36.05 E-value=52 Score=29.02 Aligned_cols=32 Identities=3% Similarity=0.026 Sum_probs=16.9
Q ss_pred hcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEE
Q 025860 83 VESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAW 118 (247)
Q Consensus 83 ~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~ 118 (247)
.+..+|++++=|=++. -...++++++. +++|+
T Consensus 93 ~~~~vD~V~I~tp~~~-H~~~~~~al~a---GkhVl 124 (412)
T 4gqa_A 93 NDPQVDVVDITSPNHL-HYTMAMAAIAA---GKHVY 124 (412)
T ss_dssp HCTTCCEEEECSCGGG-HHHHHHHHHHT---TCEEE
T ss_pred cCCCCCEEEECCCcHH-HHHHHHHHHHc---CCCeE
Confidence 3456777766554333 34555555553 34544
No 458
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=36.01 E-value=96 Score=23.19 Aligned_cols=59 Identities=14% Similarity=0.199 Sum_probs=36.6
Q ss_pred CCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEEcCCCh
Q 025860 86 APDLIAFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGINCTPP 158 (247)
Q Consensus 86 gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~NC~~p 158 (247)
.+|+.++= +|. ..+..+++.+.+.+. .-+|++ .|..-.++++.+++ .++..+|=||.+.
T Consensus 77 ~vDlvvi~-vp~-~~~~~vv~~~~~~gi-~~i~~~----------~g~~~~~l~~~a~~-~Gi~vvGpnc~gv 135 (144)
T 2d59_A 77 KIEVVDLF-VKP-KLTMEYVEQAIKKGA-KVVWFQ----------YNTYNREASKKADE-AGLIIVANRCMMR 135 (144)
T ss_dssp CCSEEEEC-SCH-HHHHHHHHHHHHHTC-SEEEEC----------TTCCCHHHHHHHHH-TTCEEEESCCHHH
T ss_pred CCCEEEEE-eCH-HHHHHHHHHHHHcCC-CEEEEC----------CCchHHHHHHHHHH-cCCEEEcCCchhh
Confidence 68998874 454 555666655555542 234421 23334667777766 5899999999753
No 459
>3mfq_A TROA, high-affinity zinc uptake system protein ZNUA; metal binding protein; 2.60A {Streptococcus suis} SCOP: c.92.2.0
Probab=36.00 E-value=54 Score=27.77 Aligned_cols=48 Identities=10% Similarity=0.134 Sum_probs=38.1
Q ss_pred CCHHHHHHHHHHHHHHHhcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEE
Q 025860 66 ITVETLKDFHRRRVQVLVESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAWF 119 (247)
Q Consensus 66 ~s~~e~~~~~~~q~~~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~i 119 (247)
.|..++.+ .++.+.+.+|..|++|...+..-++.+.+.+++.+ .|+.+
T Consensus 196 ps~~~l~~----l~~~ik~~~v~~if~e~~~~~~~~~~l~~~a~~~g--~~v~~ 243 (282)
T 3mfq_A 196 VANSDMIE----TVNLIIDHNIKAIFTESTTNPERMKKLQEAVKAKG--GQVEV 243 (282)
T ss_dssp CCHHHHHH----HHHHHHHHTCCEEECBTTSCTHHHHHHHHHHHTTS--CCCEE
T ss_pred CCHHHHHH----HHHHHHHcCCCEEEEeCCCChHHHHHHHHHHHhcC--CceEE
Confidence 47777776 55566678999999999999988999888888874 66654
No 460
>1wsa_A Asparaginase, asparagine amidohydrolase; periplasmic; 2.20A {Wolinella succinogenes} SCOP: c.88.1.1
Probab=35.89 E-value=51 Score=28.87 Aligned_cols=48 Identities=15% Similarity=0.010 Sum_probs=32.8
Q ss_pred HHHHHhcCCCCEEEEecCCCH---HHHHHHHHHHHhhCCCCcEEEEEEEcCCC
Q 025860 78 RVQVLVESAPDLIAFETIPNK---IEAQAYAELLEEENIKIPAWFSFNSKDGV 127 (247)
Q Consensus 78 q~~~l~~~gvD~i~~ET~~~~---~E~~aa~~~~~~~~~~~pv~is~~~~~~~ 127 (247)
.++.+++.|++.|++|++..- .++..+++-+.+. ++||+++-.|..+.
T Consensus 231 ~l~~~~~~g~~GiVle~~G~Gn~p~~~~~~l~~a~~~--gi~VV~~Sr~~~G~ 281 (330)
T 1wsa_A 231 LVNAALQAGAKGIIHAGMGNGNPFPLTQNALEKAAKS--GVVVARSSRVGSGS 281 (330)
T ss_dssp HHHHHHHTTCSEEEEEEBTTTBCCHHHHHHHHHHHHT--TCEEEEEESSSSSC
T ss_pred HHHHHHhCCCCEEEEeeECCCCCCHHHHHHHHHHHHC--CCEEEEECCCCCCC
Confidence 566677789999999998752 4444445444443 58988887776543
No 461
>4f8x_A Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET: NAG BMA; 1.47A {Penicillium canescens}
Probab=35.89 E-value=86 Score=27.45 Aligned_cols=48 Identities=13% Similarity=0.060 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHhcCCC--CEEEEec------CCCHHHHHHHHHHHHhhCCCCcEEEEE
Q 025860 72 KDFHRRRVQVLVESAP--DLIAFET------IPNKIEAQAYAELLEEENIKIPAWFSF 121 (247)
Q Consensus 72 ~~~~~~q~~~l~~~gv--D~i~~ET------~~~~~E~~aa~~~~~~~~~~~pv~is~ 121 (247)
.+.+...++.|.+.|+ |.|-++. .|+..+++..++.+... ++||+||=
T Consensus 190 ~~~~~~lv~~l~~~gvpidgiG~Q~H~~~~~~p~~~~~~~~l~~~a~l--Gl~v~iTE 245 (335)
T 4f8x_A 190 STAVLQLVSNLRKRGIRIDGVGLESHFIVGETPSLADQLATKQAYIKA--NLDVAVTE 245 (335)
T ss_dssp HHHHHHHHHHHHHTTCCCCEEEECCEEETTCCCCHHHHHHHHHHHHHT--TCEEEEEE
T ss_pred HHHHHHHHHHHHHCCCCcceeeeeeeecCCCCCCHHHHHHHHHHHHHc--CCeeEEee
Confidence 3456668888888774 8886653 46788999999888877 58999873
No 462
>3c2e_A Nicotinate-nucleotide pyrophosphorylase; qprtase, prtase, BNA6, mechanism, cytoplasm, glycosyltransferase, nucleus; 1.90A {Saccharomyces cerevisiae} PDB: 3c2f_A* 3c2o_A* 3c2v_A* 3c2r_A*
Probab=35.74 E-value=15 Score=31.81 Aligned_cols=24 Identities=17% Similarity=0.250 Sum_probs=6.6
Q ss_pred CCCCEEEEecCCCHHHHHHHHHHHH
Q 025860 85 SAPDLIAFETIPNKIEAQAYAELLE 109 (247)
Q Consensus 85 ~gvD~i~~ET~~~~~E~~aa~~~~~ 109 (247)
+|+|+|.+.|++ +.+++.+++.++
T Consensus 218 aGaD~I~ld~~~-~~~l~~~v~~l~ 241 (294)
T 3c2e_A 218 AGADVIMLDNFK-GDGLKMCAQSLK 241 (294)
T ss_dssp HTCSEEECCC---------------
T ss_pred cCCCEEEECCCC-HHHHHHHHHHhc
Confidence 466776666643 555555554444
No 463
>3tr2_A Orotidine 5'-phosphate decarboxylase; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.00A {Coxiella burnetii}
Probab=35.53 E-value=1.8e+02 Score=23.96 Aligned_cols=121 Identities=12% Similarity=0.109 Sum_probs=69.5
Q ss_pred HHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEEcCC-ChhHHHHHHHHHHhhc--CCC-
Q 025860 100 EAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGINCT-PPRFISGLILIIKKVT--AKP- 175 (247)
Q Consensus 100 E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~NC~-~p~~~~~~l~~l~~~~--~~p- 175 (247)
+-..+++.+++. +.+++.-+-+.|- |.++..+++.+.+ .+++.+-+++. +++.|.++++...... ..|
T Consensus 47 ~G~~~v~~L~~~--g~~iflDlK~~DI-----~nTv~~~~~~~~~-~gad~vTvh~~~G~~~~~~a~~~~~~~~~~~~~~ 118 (239)
T 3tr2_A 47 YGPAFVEELMQK--GYRIFLDLKFYDI-----PQTVAGACRAVAE-LGVWMMNIHISGGRTMMETVVNALQSITLKEKPL 118 (239)
T ss_dssp HHHHHHHHHHHT--TCCEEEEEEECSC-----HHHHHHHHHHHHH-TTCSEEEEEGGGCHHHHHHHHHHHHTCCCSSCCE
T ss_pred hCHHHHHHHHhc--CCCEEEEeccccc-----chHHHHHHHHHHh-CCCCEEEEeccCCHHHHHHHHHHHHhcCcCCCce
Confidence 344566667765 5899988887664 4556667777776 68999999997 7887878777765431 234
Q ss_pred -EEEEeCCCCcccccccccccCC-CCCh-HHHHHHHHHHHHcCCeEEeecCCCChHHHHHHHHH
Q 025860 176 -ILIYPNSGEFYDADRKEWVQNT-GVSD-EDFVSYVSKWCEVGASLVGGCCRTTPNTIKGIYRT 236 (247)
Q Consensus 176 -l~vyPNaG~~~d~~~~~~~~~~-~~~~-~~~~~~~~~~~~~G~~iIGGCCGt~P~hI~al~~~ 236 (247)
++|.--... + ...|.... ..+. +...+.++.|.+.|+. |=-|+ |.+.+.|++.
T Consensus 119 l~~Vt~LTS~--~--~~~l~~~g~~~~~~~~v~~~A~~a~~~g~~--GvV~s--~~e~~~ir~~ 174 (239)
T 3tr2_A 119 LIGVTILTSL--D--GSDLKTLGIQEKVPDIVCRMATLAKSAGLD--GVVCS--AQEAALLRKQ 174 (239)
T ss_dssp EEEECSCTTC--C--HHHHHHTTCCSCHHHHHHHHHHHHHHHTCC--EEECC--HHHHHHHHTT
T ss_pred EEEEEEEeeC--C--HHHHHhcCCCCCHHHHHHHHHHHHHHcCCC--EEEEC--chhHHHHHHh
Confidence 233222211 1 01232110 0112 3345667777777763 22344 5556666544
No 464
>1fr2_A Colicin E9 immunity protein; protein-protein complex, zinc containing enzyme, HNH-motif, immune system; 1.60A {Escherichia coli} SCOP: a.28.2.1 PDB: 1e0h_A 1emv_A 1imp_A 1imq_A 2k5x_A 2vln_A 2vlp_A 2vlq_A 2vlo_A 2gzf_A 2gzg_A 2gzi_A 2gyk_A 2gzj_A 2gze_A 1bxi_A 3gkl_C 3gjn_A
Probab=35.52 E-value=32 Score=24.24 Aligned_cols=42 Identities=24% Similarity=0.514 Sum_probs=27.9
Q ss_pred HHHHHHHHHHhhcCCC----EEEEeCCCCcccccccccccCCCCChHHHHHHHHHHHHc
Q 025860 160 FISGLILIIKKVTAKP----ILIYPNSGEFYDADRKEWVQNTGVSDEDFVSYVSKWCEV 214 (247)
Q Consensus 160 ~~~~~l~~l~~~~~~p----l~vyPNaG~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (247)
....+|..+.+.+.-| |+.||+.+. ..+|+...+.+++|+..
T Consensus 32 e~d~ll~~f~~~teHP~gSDLIfyP~~~~-------------e~spE~Iv~~ik~wRa~ 77 (86)
T 1fr2_A 32 ELVKLVTHFAEMTEHPSGSDLIYYPKEGD-------------DDSPSGIVNTVKQWRAA 77 (86)
T ss_dssp HHHHHHHHHHHHHCCTTTTHHHHSCCTTC-------------CCSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCcCceeecCCCCC-------------CCCHHHHHHHHHHHHHH
Confidence 3356666666554444 666766532 25799999999999863
No 465
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=35.48 E-value=87 Score=25.78 Aligned_cols=46 Identities=11% Similarity=0.214 Sum_probs=31.0
Q ss_pred HHHHHhcCCCCEEEEe-----cCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcC
Q 025860 78 RVQVLVESAPDLIAFE-----TIPNKIEAQAYAELLEEENIKIPAWFSFNSKD 125 (247)
Q Consensus 78 q~~~l~~~gvD~i~~E-----T~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~ 125 (247)
.++.+ ++|+|++=+- .+|++..-..+++.+|+.. ++|+-+-+-+.+
T Consensus 18 ~i~~~-~~gad~lHvDvmDG~fvpn~t~G~~~v~~lr~~~-~~~~dvhLmv~d 68 (231)
T 3ctl_A 18 QIEFI-DSHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLA-TKPLDCHLMVTR 68 (231)
T ss_dssp HHHHH-HTTCSCEEEEEECSSSSSCCCBCHHHHHHHHTTC-CSCEEEEEESSC
T ss_pred HHHHH-HcCCCEEEEEEEeCccCccchhcHHHHHHHHhcc-CCcEEEEEEecC
Confidence 66777 7898875333 3466655566788888764 688887776654
No 466
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=35.42 E-value=1.2e+02 Score=21.67 Aligned_cols=73 Identities=8% Similarity=0.033 Sum_probs=34.3
Q ss_pred CCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEEcCCChhHHHHH
Q 025860 85 SAPDLIAFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGINCTPPRFISGL 164 (247)
Q Consensus 85 ~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~NC~~p~~~~~~ 164 (247)
...|+++++....-.....+++.+++..+..|+++- + +..+.....+.+. .|++.+-.-=..++.+...
T Consensus 60 ~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~ii~~-s--------~~~~~~~~~~~~~--~g~~~~l~Kp~~~~~l~~~ 128 (152)
T 3eul_A 60 HLPDVALLDYRMPGMDGAQVAAAVRSYELPTRVLLI-S--------AHDEPAIVYQALQ--QGAAGFLLKDSTRTEIVKA 128 (152)
T ss_dssp HCCSEEEEETTCSSSCHHHHHHHHHHTTCSCEEEEE-E--------SCCCHHHHHHHHH--TTCSEEEETTCCHHHHHHH
T ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCeEEEE-E--------ccCCHHHHHHHHH--cCCCEEEecCCCHHHHHHH
Confidence 347888877432222333444555554445565432 2 1122233333332 3566665543445555555
Q ss_pred HHHH
Q 025860 165 ILII 168 (247)
Q Consensus 165 l~~l 168 (247)
++.+
T Consensus 129 i~~~ 132 (152)
T 3eul_A 129 VLDC 132 (152)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5444
No 467
>3u7b_A Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET: NAG BMA MAN; 1.94A {Fusarium oxysporum}
Probab=35.37 E-value=76 Score=27.63 Aligned_cols=47 Identities=11% Similarity=0.145 Sum_probs=36.2
Q ss_pred HHHHHHHHHHhcCC--CCEEEEe-------------cCCCHHHHHHHHHHHHhhCCCCcEEEEE
Q 025860 73 DFHRRRVQVLVESA--PDLIAFE-------------TIPNKIEAQAYAELLEEENIKIPAWFSF 121 (247)
Q Consensus 73 ~~~~~q~~~l~~~g--vD~i~~E-------------T~~~~~E~~aa~~~~~~~~~~~pv~is~ 121 (247)
+.+...++.|.+.| +|.|-+. ..|++.+++..++.+... ++||+||=
T Consensus 184 ~~~~~~v~~l~~~GvpidgiG~Q~H~~~~~~~~~~~~~p~~~~~~~~l~~~a~l--Gl~v~iTE 245 (327)
T 3u7b_A 184 EGAKRIARLVKSYGLRIDGIGLQAHMTSESTPTQNTPTPSRAKLASVLQGLADL--GVDVAYTE 245 (327)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEECCEEESSCCSSCCSCCCCHHHHHHHHHHHHTT--TCEEEEEE
T ss_pred HHHHHHHHHHHHCCCCcceEEEcccccccccccccCCCCCHHHHHHHHHHHHhc--CCceEEEe
Confidence 45667888888877 4888554 247788999999988776 58999874
No 468
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=35.30 E-value=49 Score=28.33 Aligned_cols=47 Identities=13% Similarity=-0.044 Sum_probs=25.8
Q ss_pred CHHHHHHHHHHHHHHHhcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEE
Q 025860 67 TVETLKDFHRRRVQVLVESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAW 118 (247)
Q Consensus 67 s~~e~~~~~~~q~~~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~ 118 (247)
+.+++.++.. .+..+.+..+|++++=|-++.+ ...+.++++. +++|+
T Consensus 55 ~~~~ll~~~~-~l~~~~~~~vD~V~I~tP~~~H-~~~~~~al~a---GkhVl 101 (318)
T 3oa2_A 55 EFEFFLDHAS-NLKRDSATALDYVSICSPNYLH-YPHIAAGLRL---GCDVI 101 (318)
T ss_dssp SHHHHHHHHH-HHTTSTTTSCCEEEECSCGGGH-HHHHHHHHHT---TCEEE
T ss_pred CHHHHHHhhh-hhhhccCCCCcEEEECCCcHHH-HHHHHHHHHC---CCeEE
Confidence 5566554322 1111235678888887755444 5666666663 45655
No 469
>3pzs_A PM kinase, pyridoxamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; HET: MSE; 1.89A {Yersinia pestis} SCOP: c.72.1.5 PDB: 1td2_A* 1vi9_A*
Probab=35.26 E-value=1.1e+02 Score=25.64 Aligned_cols=53 Identities=11% Similarity=0.062 Sum_probs=33.0
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHh-cCCCCEEEEecCCCHHHHHHHHHHHHhh
Q 025860 58 YSGNYGDAITVETLKDFHRRRVQVLV-ESAPDLIAFETIPNKIEAQAYAELLEEE 111 (247)
Q Consensus 58 Y~g~y~~~~s~~e~~~~~~~q~~~l~-~~gvD~i~~ET~~~~~E~~aa~~~~~~~ 111 (247)
|....++.++.+++.+..+. +..+. -..+|.+..-.+++......+.+++++.
T Consensus 49 ~~~~~g~~~~~~~~~~~~~~-~~~~~~l~~~d~v~~G~l~~~~~~~~v~~~l~~~ 102 (289)
T 3pzs_A 49 YGHWTGCVMPASHLTDIVQG-IADIDRLKDCDAVLSGYIGSPEQGSHILAAVAQV 102 (289)
T ss_dssp GSCCCEEECCHHHHHHHHHH-HHHTTCGGGCCEEEECCCSSHHHHHHHHHHHHHH
T ss_pred CCCcccccCCHHHHHHHHHH-HHhcCCccCCCEEEECCCCCHHHHHHHHHHHHHH
Confidence 43333334677777664442 22220 0268999999999988888888777654
No 470
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=35.15 E-value=40 Score=29.43 Aligned_cols=36 Identities=14% Similarity=0.111 Sum_probs=22.9
Q ss_pred HHHHHHHHhcCCCCEEEEec--CCCHHHHHHHHHHHHhh
Q 025860 75 HRRRVQVLVESAPDLIAFET--IPNKIEAQAYAELLEEE 111 (247)
Q Consensus 75 ~~~q~~~l~~~gvD~i~~ET--~~~~~E~~aa~~~~~~~ 111 (247)
|.+++..++++|.++| +|- -.++.|++.+++++++.
T Consensus 96 h~~~~~~al~~Gk~V~-~EKP~a~~~~~~~~l~~~a~~~ 133 (383)
T 3oqb_A 96 RPGLLTQAINAGKHVY-CEKPIATNFEEALEVVKLANSK 133 (383)
T ss_dssp SHHHHHHHHTTTCEEE-ECSCSCSSHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHCCCeEE-EcCCCCCCHHHHHHHHHHHHHc
Confidence 5556666666776655 564 45666777777766654
No 471
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=35.00 E-value=54 Score=28.05 Aligned_cols=24 Identities=25% Similarity=0.433 Sum_probs=11.0
Q ss_pred CCCCEEEEecCCCHHHHHHHHHHHH
Q 025860 85 SAPDLIAFETIPNKIEAQAYAELLE 109 (247)
Q Consensus 85 ~gvD~i~~ET~~~~~E~~aa~~~~~ 109 (247)
..+|++++=| |+..-...++++++
T Consensus 66 ~~vD~V~I~t-p~~~H~~~~~~al~ 89 (337)
T 3ip3_A 66 EKPDILVINT-VFSLNGKILLEALE 89 (337)
T ss_dssp HCCSEEEECS-SHHHHHHHHHHHHH
T ss_pred CCCCEEEEeC-CcchHHHHHHHHHH
Confidence 3456655544 22333344444444
No 472
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=35.00 E-value=32 Score=29.33 Aligned_cols=83 Identities=14% Similarity=0.162 Sum_probs=49.3
Q ss_pred HHHHHHHhCCCCeEEEEcCCC-----hhHHHHHHHHHHhhcCCCEEEEeCCCCc-------ccccccccc-cCCCCChHH
Q 025860 137 ECASIAESCKRVVSVGINCTP-----PRFISGLILIIKKVTAKPILIYPNSGEF-------YDADRKEWV-QNTGVSDED 203 (247)
Q Consensus 137 ~~~~~~~~~~~~~avG~NC~~-----p~~~~~~l~~l~~~~~~pl~vyPNaG~~-------~d~~~~~~~-~~~~~~~~~ 203 (247)
+.++.+.+ .|++.|=||+.+ ++.+.++++.+++..+.||++----..+ +++ .... +-. ...+.
T Consensus 38 ~~a~~~v~-~GAdiIDIg~~s~~~eE~~rv~~vi~~l~~~~~~pisIDT~~~~v~~aal~a~~G--a~iINdvs-~~~d~ 113 (271)
T 2yci_X 38 EWARRQAE-KGAHYLDVNTGPTADDPVRVMEWLVKTIQEVVDLPCCLDSTNPDAIEAGLKVHRG--HAMINSTS-ADQWK 113 (271)
T ss_dssp HHHHHHHH-TTCSEEEEECCSCSSCHHHHHHHHHHHHHHHCCCCEEEECSCHHHHHHHHHHCCS--CCEEEEEC-SCHHH
T ss_pred HHHHHHHH-CCCCEEEEcCCcCchhHHHHHHHHHHHHHHhCCCeEEEeCCCHHHHHHHHHhCCC--CCEEEECC-CCccc
Confidence 33444444 589999999953 5688999999988888998763221110 111 1111 101 11233
Q ss_pred HHHHHHHHHHcCCeEEeecC
Q 025860 204 FVSYVSKWCEVGASLVGGCC 223 (247)
Q Consensus 204 ~~~~~~~~~~~G~~iIGGCC 223 (247)
|.+...-..+.|+.+|.-+.
T Consensus 114 ~~~~~~~~a~~~~~vv~m~~ 133 (271)
T 2yci_X 114 MDIFFPMAKKYEAAIIGLTM 133 (271)
T ss_dssp HHHHHHHHHHHTCEEEEESC
T ss_pred cHHHHHHHHHcCCCEEEEec
Confidence 44444445667999999887
No 473
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=34.97 E-value=50 Score=27.80 Aligned_cols=14 Identities=14% Similarity=0.162 Sum_probs=6.0
Q ss_pred CHHHHHHHHHHHHh
Q 025860 97 NKIEAQAYAELLEE 110 (247)
Q Consensus 97 ~~~E~~aa~~~~~~ 110 (247)
++.|++.+++++++
T Consensus 102 ~~~~~~~l~~~a~~ 115 (308)
T 3uuw_A 102 TVSQGEELIELSTK 115 (308)
T ss_dssp SHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH
Confidence 34444444444443
No 474
>2d1z_A Endo-1,4-beta-D-xylanase; TIM-barrel, retaining enzyme, catalytic-site mutant, chemica hydrolase; 1.60A {Streptomyces olivaceoviridis} PDB: 2d20_A* 2d22_A 2d23_A 2d24_A* 1xyf_A 1isw_A* 1isx_A* 1isy_A* 1isv_A* 1it0_A* 1v6u_A* 1v6v_A* 1v6w_A* 1v6x_A* 1isz_A
Probab=34.89 E-value=35 Score=30.77 Aligned_cols=45 Identities=9% Similarity=0.055 Sum_probs=27.6
Q ss_pred HHHHHHHHHhcCC--CCEEEEecC-----CCHHHHHHHHHHHHhhCCCCcEEEE
Q 025860 74 FHRRRVQVLVESA--PDLIAFETI-----PNKIEAQAYAELLEEENIKIPAWFS 120 (247)
Q Consensus 74 ~~~~q~~~l~~~g--vD~i~~ET~-----~~~~E~~aa~~~~~~~~~~~pv~is 120 (247)
.+...++.|.+.| +|.|-+..- +++.+++..++.+.+. ++||+|+
T Consensus 184 ~~~~~v~~l~~~g~~iDgiG~q~H~~~~~~~~~~~~~~l~~~a~~--g~~v~iT 235 (436)
T 2d1z_A 184 GVYNMVRDFKQRGVPIDCVGFQSHFNSGSPYNSNFRTTLQNFAAL--GVDVAIT 235 (436)
T ss_dssp HHHHHHHHHHHHTCCCCEEEECCEEBTTBCCCTTHHHHHHHHHTT--TCEEEEE
T ss_pred HHHHHHHHHHhCCCcccEEEEeeEEcCCCCCHHHHHHHHHHHHHc--CCeEEEe
Confidence 3445666666655 477766433 3456677777766655 4777776
No 475
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=34.79 E-value=70 Score=26.99 Aligned_cols=45 Identities=20% Similarity=0.265 Sum_probs=26.0
Q ss_pred HHHHHHHHHhcCCCCEEEEec--CCCHHHHHHHHHHHHhhCCCCcEEEEE
Q 025860 74 FHRRRVQVLVESAPDLIAFET--IPNKIEAQAYAELLEEENIKIPAWFSF 121 (247)
Q Consensus 74 ~~~~q~~~l~~~gvD~i~~ET--~~~~~E~~aa~~~~~~~~~~~pv~is~ 121 (247)
.|.+.+..++++|..++ +|. -.+..|++.+++++++. ++.+++.+
T Consensus 77 ~h~~~~~~al~~G~~v~-~eKP~~~~~~~~~~l~~~a~~~--g~~~~~~~ 123 (319)
T 1tlt_A 77 SHFDVVSTLLNAGVHVC-VDKPLAENLRDAERLVELAARK--KLTLMVGF 123 (319)
T ss_dssp HHHHHHHHHHHTTCEEE-EESSSCSSHHHHHHHHHHHHHT--TCCEEEEC
T ss_pred hHHHHHHHHHHcCCeEE-EeCCCCCCHHHHHHHHHHHHHc--CCeEEEee
Confidence 45566666666776555 362 23566777777766654 34444443
No 476
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=34.66 E-value=2.2e+02 Score=24.38 Aligned_cols=146 Identities=13% Similarity=0.074 Sum_probs=77.8
Q ss_pred HHHHHHHhcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHh--CCCCe--EE
Q 025860 76 RRRVQVLVESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAES--CKRVV--SV 151 (247)
Q Consensus 76 ~~q~~~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~--~~~~~--av 151 (247)
.++++.+.+.|-+.|=+-.-.+.++....++++|+.+.+.++.+ .. + .|-++.++++.++. ..+++ -|
T Consensus 144 ~~~a~~~~~~Gf~~iKik~g~~~~~d~~~v~avr~~g~~~~l~v--Da--n----~~~~~~~a~~~~~~l~~~~i~~~~i 215 (345)
T 2zad_A 144 VKEAKKIFEEGFRVIKIKVGENLKEDIEAVEEIAKVTRGAKYIV--DA--N----MGYTQKEAVEFARAVYQKGIDIAVY 215 (345)
T ss_dssp HHHHHHHHHTTCSEEEEECCSCHHHHHHHHHHHHHHSTTCEEEE--EC--T----TCSCHHHHHHHHHHHHHTTCCCSEE
T ss_pred HHHHHHHHHcCcCEEEEeecCCHHHHHHHHHHHHhhCCCCeEEE--EC--C----CCCCHHHHHHHHHHHHhcCCCeeee
Confidence 34666667788888865544467777777888888765566654 33 2 35567777665542 13444 33
Q ss_pred EEcCCChhHHHHHHHHHHhhcCCCEEEEeCCCCcccccccccccCC-----CCChH-----HHHHHHHHHHHcCCeEEee
Q 025860 152 GINCTPPRFISGLILIIKKVTAKPILIYPNSGEFYDADRKEWVQNT-----GVSDE-----DFVSYVSKWCEVGASLVGG 221 (247)
Q Consensus 152 G~NC~~p~~~~~~l~~l~~~~~~pl~vyPNaG~~~d~~~~~~~~~~-----~~~~~-----~~~~~~~~~~~~G~~iIGG 221 (247)
==-| .++. ...++.+++..+.||..==+....++. ..+.... ...+. +..+.+....+.|+.++-|
T Consensus 216 E~P~-~~~~-~~~~~~l~~~~~ipia~dE~~~~~~~~--~~~i~~~~~d~v~ik~~~GGit~~~~i~~~A~~~g~~~~~~ 291 (345)
T 2zad_A 216 EQPV-RRED-IEGLKFVRFHSPFPVAADESARTKFDV--MRLVKEEAVDYVNIKLMKSGISDALAIVEIAESSGLKLMIG 291 (345)
T ss_dssp ECCS-CTTC-HHHHHHHHHHSSSCEEESTTCCSHHHH--HHHHHHTCCSEEEECHHHHHHHHHHHHHHHHHTTTCEEEEC
T ss_pred eCCC-Cccc-HHHHHHHHHhCCCCEEEeCCcCCHHHH--HHHHHhCCCCEEEEecccccHHHHHHHHHHHHHcCCeEEEe
Confidence 2222 2333 455666777778887653222111111 0010000 01122 2223333344579999999
Q ss_pred cCCCChHHHHHH
Q 025860 222 CCRTTPNTIKGI 233 (247)
Q Consensus 222 CCGt~P~hI~al 233 (247)
|+.-++-.+.+.
T Consensus 292 ~~~es~i~~aa~ 303 (345)
T 2zad_A 292 CMGESSLGINQS 303 (345)
T ss_dssp CSSCCHHHHHHH
T ss_pred cCcccHHHHHHH
Confidence 997666555443
No 477
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=34.37 E-value=68 Score=27.35 Aligned_cols=44 Identities=11% Similarity=0.096 Sum_probs=23.0
Q ss_pred HHHHHHHHhcCCCCEEEEec--CCCHHHHHHHHHHHHhhCCCCcEEEEE
Q 025860 75 HRRRVQVLVESAPDLIAFET--IPNKIEAQAYAELLEEENIKIPAWFSF 121 (247)
Q Consensus 75 ~~~q~~~l~~~gvD~i~~ET--~~~~~E~~aa~~~~~~~~~~~pv~is~ 121 (247)
|.+++..++++|..+| +|- -.++.|++.+++++++. ++.+++.+
T Consensus 79 H~~~~~~al~~GkhVl-~EKP~a~~~~e~~~l~~~a~~~--~~~~~v~~ 124 (334)
T 3ohs_X 79 HKAAVMLCLAAGKAVL-CEKPMGVNAAEVREMVTEARSR--GLFLMEAI 124 (334)
T ss_dssp HHHHHHHHHHTTCEEE-EESSSSSSHHHHHHHHHHHHHT--TCCEEEEC
T ss_pred HHHHHHHHHhcCCEEE-EECCCCCCHHHHHHHHHHHHHh--CCEEEEEE
Confidence 5555555566665533 352 23566666666665554 24444433
No 478
>3l52_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, PSI-2, protein structure initiative; 1.35A {Streptomyces avermitilis} PDB: 3v75_A*
Probab=34.30 E-value=52 Score=28.32 Aligned_cols=149 Identities=11% Similarity=0.026 Sum_probs=88.5
Q ss_pred CHHHHHHHHHHHHHHHhcCCCCEE-----EEecCCC--HHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHH
Q 025860 67 TVETLKDFHRRRVQVLVESAPDLI-----AFETIPN--KIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECA 139 (247)
Q Consensus 67 s~~e~~~~~~~q~~~l~~~gvD~i-----~~ET~~~--~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~ 139 (247)
+.+-+.++-+..++.+.+ -|.++ +||.... +..++.+++.+++. +.+|+.-+-+.|-+. +...++
T Consensus 44 ~~~~~~~~~~~ivd~l~~-~v~~~Kvg~~lf~~~G~~G~~~l~~~i~~l~~~--g~~VflDlK~~DIpn-----Tv~~ya 115 (284)
T 3l52_A 44 DVAGLERFSRTVVEALGE-HVAVFKPQSAFFERFGSRGVAVLEKTVAEARAA--GALVVMDAKRGDIGS-----TMAAYA 115 (284)
T ss_dssp SHHHHHHHHHHHHHHHTT-TCSEEEEBHHHHHTTHHHHHHHHHHHHHHHHHT--TCEEEEEEEECCCHH-----HHHHHH
T ss_pred chHHHHHHHHHHHHHhCC-cceEEEeeHHHHHhcCHHHHHHHHHHHHHHHHC--CCcEEEEecccCcHH-----HHHHHH
Confidence 567788888888888764 35554 4454431 23455566777765 589999888877544 455566
Q ss_pred HHHHh---CCCCeEEEEcCC-ChhHHHHHHHHHHhhcCCCEE---EEeCCCC--cccccccccccCCCCC-hHHHHHHHH
Q 025860 140 SIAES---CKRVVSVGINCT-PPRFISGLILIIKKVTAKPIL---IYPNSGE--FYDADRKEWVQNTGVS-DEDFVSYVS 209 (247)
Q Consensus 140 ~~~~~---~~~~~avG~NC~-~p~~~~~~l~~l~~~~~~pl~---vyPNaG~--~~d~~~~~~~~~~~~~-~~~~~~~~~ 209 (247)
+.+.. ..+++++-+|.. +.+.|.++++..... ++-++ -.-|.|. ..+.. ... ..+ -+...+.+.
T Consensus 116 ~~~~~~~~~lg~D~vTvh~~~G~~~l~~~~~~a~~~-~kgvfvL~~tSnpg~~~~q~~~----~~~-g~~l~e~V~~~a~ 189 (284)
T 3l52_A 116 EAFLRKDSPLFSDALTVSPYLGYGSLRPAVELARES-GAGLFVLALTSNPEGGEVQHAV----RTD-GRDVAATMLAHLA 189 (284)
T ss_dssp HHHSSTTSTTCCSEEEECCTTCGGGGHHHHHHHHHH-TCEEEEEEECCSTTTHHHHTCB----CTT-SCBHHHHHHHHHH
T ss_pred HHHhccccccCCcEEEEeccCCHHHHHHHHHHHHhc-CCeEEEEEeCCCCChHHHHhcc----ccC-CCcHHHHHHHHHH
Confidence 55432 257999999997 788888888776554 33332 3344442 11110 000 011 245667777
Q ss_pred HHHH--cCCeEEeecCCCC-hHH
Q 025860 210 KWCE--VGASLVGGCCRTT-PNT 229 (247)
Q Consensus 210 ~~~~--~G~~iIGGCCGt~-P~h 229 (247)
.|-. .+...+|--||.| |+.
T Consensus 190 ~~~~~~~~~g~~G~VvgAT~pe~ 212 (284)
T 3l52_A 190 AENAGEEPLGSFGAVVGATLGDL 212 (284)
T ss_dssp HHTTTCSSCCSEEEEECTTCSCG
T ss_pred HhccccCcCCCeeEEECCCchhh
Confidence 7742 1345588888865 654
No 479
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=34.28 E-value=1.9e+02 Score=23.53 Aligned_cols=118 Identities=4% Similarity=-0.028 Sum_probs=68.2
Q ss_pred HHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEEcCC-ChhHHHHHHHHHHhhcCCCEEEEe
Q 025860 102 QAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGINCT-PPRFISGLILIIKKVTAKPILIYP 180 (247)
Q Consensus 102 ~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~NC~-~p~~~~~~l~~l~~~~~~pl~vyP 180 (247)
..+++.+++.. +.++++-+-+.|. |.++...++.+.+ .+++.|-++.. +++.+.++++.+++... -+.+.-
T Consensus 53 ~~~v~~l~~~~-g~~v~lD~Kl~Di-----pnTv~~~~~~~~~-~gad~vtvh~~~G~~~l~~~~~~~~~~g~-~v~vLt 124 (228)
T 3m47_A 53 MDIIAEFRKRF-GCRIIADFKVADI-----PETNEKICRATFK-AGADAIIVHGFPGADSVRACLNVAEEMGR-EVFLLT 124 (228)
T ss_dssp THHHHHHHHHH-CCEEEEEEEECSC-----HHHHHHHHHHHHH-TTCSEEEEESTTCHHHHHHHHHHHHHHTC-EEEEEC
T ss_pred HHHHHHHHhcC-CCeEEEEEeeccc-----HhHHHHHHHHHHh-CCCCEEEEeccCCHHHHHHHHHHHHhcCC-CeEEEE
Confidence 34566677621 4788887777543 4456667777766 58999999996 67778888887765422 232211
Q ss_pred CCCCcccccccccccCCCCChHHH-HHHHHHHHHcCCeEEeecCC-CChHHHHHHHHHhhC
Q 025860 181 NSGEFYDADRKEWVQNTGVSDEDF-VSYVSKWCEVGASLVGGCCR-TTPNTIKGIYRTLSN 239 (247)
Q Consensus 181 NaG~~~d~~~~~~~~~~~~~~~~~-~~~~~~~~~~G~~iIGGCCG-t~P~hI~al~~~l~~ 239 (247)
-.. + ..+.. ...++ .+.++...+.|. .|=-|+ |.|+.++.|++....
T Consensus 125 ~~s---~---~~~~~----~~~~~~~~~a~~a~~~G~--~GvV~~at~~~e~~~ir~~~~~ 173 (228)
T 3m47_A 125 EMS---H---PGAEM----FIQGAADEIARMGVDLGV--KNYVGPSTRPERLSRLREIIGQ 173 (228)
T ss_dssp CCC---S---GGGGT----THHHHHHHHHHHHHHTTC--CEEECCSSCHHHHHHHHHHHCS
T ss_pred eCC---C---ccHHH----HHHHHHHHHHHHHHHhCC--cEEEECCCChHHHHHHHHhcCC
Confidence 110 0 01110 01122 233334455675 455566 458999999987653
No 480
>3ldv_A Orotidine 5'-phosphate decarboxylase; structural genomics, infectious diseases; 1.77A {Vibrio cholerae o1 biovar el tor} PDB: 3uwq_A*
Probab=34.25 E-value=2.1e+02 Score=23.98 Aligned_cols=99 Identities=12% Similarity=0.097 Sum_probs=57.6
Q ss_pred HHHHhcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEc---CCCccc---CCCcHHHHHHHHHh---CCCCe
Q 025860 79 VQVLVESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAWFSFNSK---DGVNVV---SGDSLLECASIAES---CKRVV 149 (247)
Q Consensus 79 ~~~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~---~~~~l~---~G~~~~~~~~~~~~---~~~~~ 149 (247)
++.+.+.|+|++-+=...-..-++++++.+++.+.+.|-++.+++- ++..+. -+.++.+.+..+.. ..++
T Consensus 98 ~~~~~~~gaD~vTVh~~~G~~~~~~a~~~~~~~g~~~~~li~VtvLTS~s~~~l~~~g~~~~~~~~V~~~A~~a~~aG~- 176 (255)
T 3ldv_A 98 VKAAAELGVWMVNVHASGGERMMAASREILEPYGKERPLLIGVTVLTSMESADLQGIGILSAPQDHVLRLATLTKNAGL- 176 (255)
T ss_dssp HHHHHHTTCSEEEEEGGGCHHHHHHHHHHHGGGGGGSCEEEEECSCTTCCHHHHHHTTCCSCHHHHHHHHHHHHHHTTC-
T ss_pred HHHHHhcCCCEEEEeccCCHHHHHHHHHHHhhcCCCCceEEEEEEEecCCHHHHHhcCCCCCHHHHHHHHHHHHHHcCC-
Confidence 3456678999998888887888888888887653245777766642 111111 23466665555432 1243
Q ss_pred EEEEcCCChhHHHHHHHHHHhhc-CCCEEEEeCCCC
Q 025860 150 SVGINCTPPRFISGLILIIKKVT-AKPILIYPNSGE 184 (247)
Q Consensus 150 avG~NC~~p~~~~~~l~~l~~~~-~~pl~vyPNaG~ 184 (247)
.|+=|+ |.. ++.+++.. ...+++-|--+.
T Consensus 177 -~GvV~s-a~e----~~~iR~~~g~~fl~VtPGIr~ 206 (255)
T 3ldv_A 177 -DGVVCS-AQE----ASLLKQHLGREFKLVTPGIRP 206 (255)
T ss_dssp -SEEECC-HHH----HHHHHHHHCTTSEEEEECCCC
T ss_pred -CEEEEC-HHH----HHHHHHhcCCCcEEEeCCccc
Confidence 566787 332 23333332 345677786553
No 481
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=34.15 E-value=65 Score=28.50 Aligned_cols=76 Identities=13% Similarity=0.100 Sum_probs=49.7
Q ss_pred HHHHHHHHhcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHh--CCCCeEEE
Q 025860 75 HRRRVQVLVESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAES--CKRVVSVG 152 (247)
Q Consensus 75 ~~~q~~~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~--~~~~~avG 152 (247)
|.+.+..++++|.++|+ |-=-+.+|++.+++++++. ++.+++.+...-.. .-..+.++++.+.. ...+..+-
T Consensus 83 ~~~~a~~al~aGkhVl~-EKPl~~~ea~~l~~~A~~~--g~~~~v~~~yr~~p---~vr~~i~~~~~l~~~~~~~~~~i~ 156 (372)
T 4gmf_A 83 GTQLARHFLARGVHVIQ-EHPLHPDDISSLQTLAQEQ--GCCYWINTFYPHTR---AGRTWLRDAQQLRRCLAKTPPVVH 156 (372)
T ss_dssp HHHHHHHHHHTTCEEEE-ESCCCHHHHHHHHHHHHHH--TCCEEEECSGGGSH---HHHHHHHHHHHHHHHHTSCCSEEE
T ss_pred HHHHHHHHHHcCCcEEE-ecCCCHHHHHHHHHHHHHc--CCEEEEcCcccCCH---HHHHHHHHHHHHHhhccCCceEEE
Confidence 46788888889998776 7434789999999999987 58888876432211 11123344444432 23566777
Q ss_pred EcCC
Q 025860 153 INCT 156 (247)
Q Consensus 153 ~NC~ 156 (247)
+.|+
T Consensus 157 ~~~s 160 (372)
T 4gmf_A 157 ATTS 160 (372)
T ss_dssp EEEC
T ss_pred EEec
Confidence 7786
No 482
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=33.95 E-value=2.2e+02 Score=24.24 Aligned_cols=125 Identities=15% Similarity=0.116 Sum_probs=71.8
Q ss_pred CCHHHHHHHHHHHHHHHhcCCCCEEEEecCCC-------HHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHH
Q 025860 66 ITVETLKDFHRRRVQVLVESAPDLIAFETIPN-------KIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLEC 138 (247)
Q Consensus 66 ~s~~e~~~~~~~q~~~l~~~gvD~i~~ET~~~-------~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~ 138 (247)
++.+++.+ +++.+.+.|+.-|.| +-.. ...+..+++.+++.. ++.+ +++ .|....+.
T Consensus 91 ls~eei~~----~~~~~~~~G~~~i~l-~gGe~p~~~~~~~~~~~l~~~ik~~~-~i~i--~~s--------~g~~~~e~ 154 (350)
T 3t7v_A 91 LTMEEIKE----TCKTLKGAGFHMVDL-TMGEDPYYYEDPNRFVELVQIVKEEL-GLPI--MIS--------PGLMDNAT 154 (350)
T ss_dssp CCHHHHHH----HHHHHTTSCCSEEEE-EECCCHHHHHSTHHHHHHHHHHHHHH-CSCE--EEE--------CSSCCHHH
T ss_pred CCHHHHHH----HHHHHHHCCCCEEEE-eeCCCCccccCHHHHHHHHHHHHhhc-CceE--EEe--------CCCCCHHH
Confidence 57888877 566677789998887 3322 345566667676532 3443 332 35455677
Q ss_pred HHHHHhCCCCeEEEEcC--CChhHHHHHHHHHHhhcCCCEEEEeCCCCcccccccccccCCCCChHHHHHHHHHHHHcCC
Q 025860 139 ASIAESCKRVVSVGINC--TPPRFISGLILIIKKVTAKPILIYPNSGEFYDADRKEWVQNTGVSDEDFVSYVSKWCEVGA 216 (247)
Q Consensus 139 ~~~~~~~~~~~avG~NC--~~p~~~~~~l~~l~~~~~~pl~vyPNaG~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 216 (247)
++.+.+ .|++.+.++= .+++ +++.+. | + .+.+++.+.++.+.+.|.
T Consensus 155 l~~L~~-aG~~~i~i~lEt~~~~----~~~~i~-----~-------~---------------~~~~~~l~~i~~a~~~Gi 202 (350)
T 3t7v_A 155 LLKARE-KGANFLALYQETYDTE----LYRKLR-----V-------G---------------QSFDGRVNARRFAKQQGY 202 (350)
T ss_dssp HHHHHH-TTEEEEECCCBCSCHH----HHHHHS-----T-------T---------------CCHHHHHHHHHHHHHHTC
T ss_pred HHHHHH-cCCCEEEEeeecCCHH----HHHHhC-----C-------C---------------CCHHHHHHHHHHHHHcCC
Confidence 777877 5777666543 2232 333331 0 0 123556666666666675
Q ss_pred eE----EeecCCCChHHHHHHHHHhhC
Q 025860 217 SL----VGGCCRTTPNTIKGIYRTLSN 239 (247)
Q Consensus 217 ~i----IGGCCGt~P~hI~al~~~l~~ 239 (247)
.+ +=|- |-|++++..+.+.+.+
T Consensus 203 ~v~~~~i~Gl-get~e~~~~~l~~l~~ 228 (350)
T 3t7v_A 203 CVEDGILTGV-GNDIESTILSLRGMST 228 (350)
T ss_dssp EEEEEEEESS-SCCHHHHHHHHHHHHH
T ss_pred eEccceEeec-CCCHHHHHHHHHHHHh
Confidence 42 2233 6777777777666654
No 483
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=33.94 E-value=1.5e+02 Score=25.18 Aligned_cols=61 Identities=11% Similarity=0.051 Sum_probs=41.4
Q ss_pred HhcCCCCEEEE-ecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEEcCCC
Q 025860 82 LVESAPDLIAF-ETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGINCTP 157 (247)
Q Consensus 82 l~~~gvD~i~~-ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~NC~~ 157 (247)
....|+|.+++ =.+-+..+++...+.+++.+ +-+++-+. +.+++-+.+. .++..||||.-.
T Consensus 122 Ar~~GADaILLI~a~L~~~~l~~l~~~A~~lG--l~~LvEVh-----------~~~El~rAl~--~~a~iIGINNRn 183 (258)
T 4a29_A 122 AYNLGADTVLLIVKILTERELESLLEYARSYG--MEPLILIN-----------DENDLDIALR--IGARFIGIMSRD 183 (258)
T ss_dssp HHHHTCSEEEEEGGGSCHHHHHHHHHHHHHTT--CCCEEEES-----------SHHHHHHHHH--TTCSEEEECSBC
T ss_pred HHHcCCCeeehHHhhcCHHHHHHHHHHHHHHh--HHHHHhcc-----------hHHHHHHHhc--CCCcEEEEeCCC
Confidence 33469999865 45666788899999999885 66665552 2344444343 478999999853
No 484
>3l9c_A 3-dehydroquinate dehydratase; AROD, amino-acid biosynthesis, aromatic amino acid biosynthe schiff base, lyase; 1.60A {Streptococcus mutans}
Probab=33.69 E-value=2.1e+02 Score=23.95 Aligned_cols=93 Identities=15% Similarity=0.124 Sum_probs=55.6
Q ss_pred HHHHHhc-CCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEEcCC
Q 025860 78 RVQVLVE-SAPDLIAFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGINCT 156 (247)
Q Consensus 78 q~~~l~~-~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~NC~ 156 (247)
.++.+++ .|+|+|=+|-... .+ .++-++. ...+++|+.-.+. +++ .+.+.++.+.. .++|.+=+-+.
T Consensus 114 ll~~~~~~~~~dyIDVEl~~~-~~---~~~~l~~---~~kiI~S~Hdf~~--tp~--el~~~~~~~~~-~GaDIvKia~~ 181 (259)
T 3l9c_A 114 IIRDIAALYQPDYIDFEYFSY-RD---VLEEMYD---FSNLILSYHNFEE--TPE--NLMEVFSELTA-LAPRVVKIAVM 181 (259)
T ss_dssp HHHHHHHHHCCSEEEEEHHHH-GG---GGGGGTT---CSSEEEEEEESSC--CCT--THHHHHHHHHH-TCCSEEEEEEC
T ss_pred HHHHHHHhcCCCEEEEECcCC-HH---HHHHHHh---cCeEEEEeccCCC--CHH--HHHHHHHHHHH-cCCCEEEEEec
Confidence 3333333 5799999994321 11 1111222 2478999984332 223 56777777766 57888777664
Q ss_pred --ChhHHHHHHHHHHhh----cCCCEEEEeCC
Q 025860 157 --PPRFISGLILIIKKV----TAKPILIYPNS 182 (247)
Q Consensus 157 --~p~~~~~~l~~l~~~----~~~pl~vyPNa 182 (247)
+++....+++..... .+.|++.+.-+
T Consensus 182 a~s~~Dvl~Ll~~~~~~~~~~~~~PlIa~~MG 213 (259)
T 3l9c_A 182 PKNEQDVLDLMNYTRGFKTLNPNQEYVTMSMS 213 (259)
T ss_dssp CSSHHHHHHHHHHHHHHHHHCTTSEEEEEECT
T ss_pred CCCHHHHHHHHHHHHHHHhccCCCCEEEEECC
Confidence 577777777765432 46899888654
No 485
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=33.68 E-value=67 Score=27.85 Aligned_cols=24 Identities=17% Similarity=0.088 Sum_probs=10.4
Q ss_pred CCCCEEEEecCCCHHHHHHHHHHHH
Q 025860 85 SAPDLIAFETIPNKIEAQAYAELLE 109 (247)
Q Consensus 85 ~gvD~i~~ET~~~~~E~~aa~~~~~ 109 (247)
..+|++++=|-+ ..-...+.++++
T Consensus 64 ~~~D~V~i~tp~-~~h~~~~~~al~ 87 (359)
T 3e18_A 64 EKVDAVLIATPN-DSHKELAISALE 87 (359)
T ss_dssp TTCCEEEECSCG-GGHHHHHHHHHH
T ss_pred CCCCEEEEcCCc-HHHHHHHHHHHH
Confidence 445555544422 223344444443
No 486
>2ox1_A 3-dehydroquinate dehydratase; (beta-alpha)8 barrel, lyase; 2.33A {Archaeoglobus fulgidus}
Probab=33.63 E-value=1.2e+02 Score=24.36 Aligned_cols=94 Identities=10% Similarity=0.063 Sum_probs=56.7
Q ss_pred CHHHHHHHHHHHHHHHhcCCC-CEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhC
Q 025860 67 TVETLKDFHRRRVQVLVESAP-DLIAFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESC 145 (247)
Q Consensus 67 s~~e~~~~~~~q~~~l~~~gv-D~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~ 145 (247)
+.++..+ .++..++.|+ |++=+|-...-.. ++ + +..+++|+.-.+ .+++-+.+.+.++ ..
T Consensus 56 ~~~~~~~----ll~~~~~~g~~d~iDvEl~~~~~~-------i~--~-~~kvI~S~Hdf~--~tp~~~~l~~~~~---~~ 116 (196)
T 2ox1_A 56 DERERIE----KMKRAFDSLNPDYVDLESDLPDSA-------FD--F-NCRIIESYHNFI--RTPDYSELKGIVE---GR 116 (196)
T ss_dssp CHHHHHH----HHHHHHHHHCCSEEEEETTSCGGG-------CC--C-SSEEEEEEEESS--CCCCHHHHHHHHH---TC
T ss_pred CHHHHHH----HHHHHHHhCCCcEEEEECCCCHhH-------Hh--C-CCEEEEEecCCC--CCcCHHHHHHHHH---HH
Confidence 5444444 4444555666 9999996543222 22 2 689999998543 2222223444443 34
Q ss_pred CCCeEEEEcCC--ChhHHHHHHHHHHhhcCCCEEEEeCC
Q 025860 146 KRVVSVGINCT--PPRFISGLILIIKKVTAKPILIYPNS 182 (247)
Q Consensus 146 ~~~~avG~NC~--~p~~~~~~l~~l~~~~~~pl~vyPNa 182 (247)
.+ |.+=+-+. +++....+++..... + |++++.-+
T Consensus 117 ~g-DivKia~~a~~~~D~l~ll~~~~~~-~-p~I~~~MG 152 (196)
T 2ox1_A 117 RG-DLVKIATMGKSKRDVETIVRILTNY-D-DVVAFLMG 152 (196)
T ss_dssp CS-SEEEEEEECCSHHHHHHHHHHHHHC-S-SEEEEEES
T ss_pred cC-CEEEEEEcCCCHHHHHHHHHHHhhC-C-CeEEEEcC
Confidence 67 88777774 678888888876654 2 98877654
No 487
>3qz6_A HPCH/HPAI aldolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.00A {Desulfitobacterium hafniense} SCOP: c.1.12.0
Probab=33.54 E-value=2.1e+02 Score=23.82 Aligned_cols=78 Identities=8% Similarity=0.033 Sum_probs=50.5
Q ss_pred HHHHHhcCCCCEEEEe---cCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEEc
Q 025860 78 RVQVLVESAPDLIAFE---TIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGIN 154 (247)
Q Consensus 78 q~~~l~~~gvD~i~~E---T~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~N 154 (247)
.++.+...|.|++++. ...+...+...+.+++.. +.++||-+. ..++ .++.. +.+ .++++|-+-
T Consensus 29 ~~e~a~~~g~D~vilDlEhav~~~~k~~~~l~a~~~~--~~~~~VRVn--------~~~~-~di~~-~ld-~G~~gI~lP 95 (261)
T 3qz6_A 29 IVRIYAEAGLDYFIVDCEHAAYTFREINHLVSVAKNA--GVSVLVRIP--------QVDR-AHVQR-LLD-IGAEGFMIP 95 (261)
T ss_dssp HHHHHHHTTCSEEEEESSSSCCCHHHHHHHHHHHHHH--TCEEEEECS--------SCCH-HHHHH-HHH-HTCCEEEET
T ss_pred HHHHHhcCCcCEEEEeccCCCCCHHHHHHHHHHHhhc--CCeEEEEeC--------CCCH-HHHHH-HHh-cCCCEEEEC
Confidence 4555666899999986 555666666666665544 466666552 1222 34443 334 478998888
Q ss_pred CC-ChhHHHHHHHHH
Q 025860 155 CT-PPRFISGLILII 168 (247)
Q Consensus 155 C~-~p~~~~~~l~~l 168 (247)
-+ +++.+..+.+.+
T Consensus 96 ~v~saed~~~~~~~~ 110 (261)
T 3qz6_A 96 GVQSAETMRETVRLA 110 (261)
T ss_dssp TCCSHHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHh
Confidence 76 788888887776
No 488
>1ct5_A Protein (yeast hypothetical protein, selenoMet); TIM barrel, pyridoxal-5'-phosphate, selenomethionine, structural genomics, PSI; HET: PLP; 2.00A {Saccharomyces cerevisiae} SCOP: c.1.6.2 PDB: 1b54_A*
Probab=33.44 E-value=84 Score=26.19 Aligned_cols=69 Identities=20% Similarity=0.150 Sum_probs=45.7
Q ss_pred CEEEEecCCCHHHHHHHHHHHHhhCC---CCcEEEEEEEcCCCcccCCCcH-HH---HHHHHH--hCCCCeEEEEcCCC
Q 025860 88 DLIAFETIPNKIEAQAYAELLEEENI---KIPAWFSFNSKDGVNVVSGDSL-LE---CASIAE--SCKRVVSVGINCTP 157 (247)
Q Consensus 88 D~i~~ET~~~~~E~~aa~~~~~~~~~---~~pv~is~~~~~~~~l~~G~~~-~~---~~~~~~--~~~~~~avG~NC~~ 157 (247)
.+=++.|+.+++.++.+-+.+++.+. .++|++.+..-.+ .-+.|.+. ++ .++.+. ...++...|+-|-.
T Consensus 106 ~~~l~~sVds~~~a~~l~~~a~~~~~~~~~l~V~lqVdtG~e-~~R~G~~~~~e~~~l~~~i~~~~~~~L~l~Glmth~ 183 (256)
T 1ct5_A 106 NLYSVETIDSLKKAKKLNESRAKFQPDCNPILCNVQINTSHE-DQKSGLNNEAEIFEVIDFFLSEECKYIKLNGLMTIG 183 (256)
T ss_dssp TEEEEEEECSHHHHHHHHHHHHHHCTTSCCEEEEEEBCCSSS-CCSSSBCCHHHHHHHHHHHHSTTCCSEEEEEEECCC
T ss_pred ccCEEEEECCHHHHHHHHHHHHHcCCCCCCceEEEEEECCCC-CCCcCcCchHHHHHHHHHHHHccCCCeeEEEEEEEC
Confidence 34466899999999988887777654 4577777755321 23467655 44 445555 55677888888754
No 489
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=33.40 E-value=69 Score=27.74 Aligned_cols=36 Identities=11% Similarity=0.238 Sum_probs=17.6
Q ss_pred HHHHHHHHhcCCCCEEEEec--CCCHHHHHHHHHHHHhh
Q 025860 75 HRRRVQVLVESAPDLIAFET--IPNKIEAQAYAELLEEE 111 (247)
Q Consensus 75 ~~~q~~~l~~~gvD~i~~ET--~~~~~E~~aa~~~~~~~ 111 (247)
|.+++..++++|.++|+ |- -.++.|++.+++++++.
T Consensus 78 H~~~~~~al~aGkhVl~-EKPla~~~~e~~~l~~~a~~~ 115 (358)
T 3gdo_A 78 HYEHTMACIQAGKHVVM-EKPMTATAEEGETLKRAADEK 115 (358)
T ss_dssp HHHHHHHHHHTTCEEEE-ESSCCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCeEEE-ecCCcCCHHHHHHHHHHHHHc
Confidence 44455555555554443 52 23455555555555544
No 490
>2dsk_A Chitinase; catalytic domain, active domain, crystalline CHIT barrel, hydrolase; 1.50A {Pyrococcus furiosus} PDB: 3a4w_A* 3a4x_A* 3afb_A
Probab=33.37 E-value=1.4e+02 Score=25.83 Aligned_cols=72 Identities=15% Similarity=0.174 Sum_probs=49.7
Q ss_pred CHHHHHHHHHHHHHHHhcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHH
Q 025860 67 TVETLKDFHRRRVQVLVESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECA 139 (247)
Q Consensus 67 s~~e~~~~~~~q~~~l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~ 139 (247)
+.+++.+.|...++...=.|+|+=+ |.=........+++.+++..+++.+++++.....+...+|..+.+.+
T Consensus 95 ~~~~~a~~~~~~i~~ygldGIDfDi-E~~~~~d~~~~aL~~l~~~~p~~~vs~TL~~~p~gl~~~g~~~l~~a 166 (311)
T 2dsk_A 95 TPEQLAEWYIKVIDTYNATYLDFDI-EAGIDADKLADALLIVQRERPWVKFSFTLPSDPGIGLAGGYGIIETM 166 (311)
T ss_dssp SHHHHHHHHHHHHHHHTCSEEEEEE-CSCCCHHHHHHHHHHHHHHSTTCEEEEEEEEETTTEESTHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhCCCcEEEec-cCCccHHHHHHHHHHHHhhCCCcEEEEEeccCCCCCCcchHHHHHHH
Confidence 6788888888777766556788655 87666666667777777665567777777766666555665444444
No 491
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=33.33 E-value=2.8e+02 Score=25.20 Aligned_cols=100 Identities=14% Similarity=0.077 Sum_probs=54.9
Q ss_pred HHHHHHhcCCCCEEEEecCCCHH---HHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeEEEE
Q 025860 77 RRVQVLVESAPDLIAFETIPNKI---EAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGI 153 (247)
Q Consensus 77 ~q~~~l~~~gvD~i~~ET~~~~~---E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~avG~ 153 (247)
..++.+.+.+.|+++++|-+... +...-+..+.+.. .|..+-|.++. . .|....+.+..+.+..++.+|-+
T Consensus 173 ~al~~a~~~~~DvVIIDTaGrl~~d~~lm~el~~i~~~~--~pd~vlLVvDA--~--~gq~a~~~a~~f~~~~~i~gVIl 246 (443)
T 3dm5_A 173 EGVDYFKSKGVDIIIVDTAGRHKEDKALIEEMKQISNVI--HPHEVILVIDG--T--IGQQAYNQALAFKEATPIGSIIV 246 (443)
T ss_dssp HHHHHHHHTTCSEEEEECCCCSSCCHHHHHHHHHHHHHH--CCSEEEEEEEG--G--GGGGHHHHHHHHHHSCTTEEEEE
T ss_pred HHHHHHHhCCCCEEEEECCCcccchHHHHHHHHHHHHhh--cCceEEEEEeC--C--CchhHHHHHHHHHhhCCCeEEEE
Confidence 34555666789999999987432 2222222222221 23333333321 1 26666666677776567888999
Q ss_pred cCCC-hhHHHHHHHHHHhhcCCCEEEEeCCCC
Q 025860 154 NCTP-PRFISGLILIIKKVTAKPILIYPNSGE 184 (247)
Q Consensus 154 NC~~-p~~~~~~l~~l~~~~~~pl~vyPNaG~ 184 (247)
|=.+ ....-.++. +....+.|+...-+ |.
T Consensus 247 TKlD~~~~gG~~ls-~~~~~g~PI~fig~-Ge 276 (443)
T 3dm5_A 247 TKLDGSAKGGGALS-AVAATGAPIKFIGT-GE 276 (443)
T ss_dssp ECCSSCSSHHHHHH-HHHTTCCCEEEEEC-SS
T ss_pred ECCCCcccccHHHH-HHHHHCCCEEEEEc-CC
Confidence 9863 222222333 33356899865554 54
No 492
>1yx1_A Hypothetical protein PA2260; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.80A {Pseudomonas aeruginosa PAO1} SCOP: c.1.15.7
Probab=33.31 E-value=1.9e+02 Score=23.26 Aligned_cols=59 Identities=12% Similarity=0.013 Sum_probs=24.3
Q ss_pred HHHHhcCCCCEEEEecCCC-----HHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHHHHHHH
Q 025860 79 VQVLVESAPDLIAFETIPN-----KIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLECASIA 142 (247)
Q Consensus 79 ~~~l~~~gvD~i~~ET~~~-----~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~ 142 (247)
++.+.+.||. |++|+.+. +.++..+++.+++.+ -| +.++++-......|.++.+.++.+
T Consensus 118 ~~~a~~~Gv~-l~lEn~~~~~~~~~~~~~~ll~~v~~~~--~~--vg~~~D~g~~~~~~~d~~~~~~~~ 181 (264)
T 1yx1_A 118 GRRLARHGLQ-LLVENDQTPQGGRIEVLERFFRLAERQQ--LD--LAMTFDIGNWRWQEQAADEAALRL 181 (264)
T ss_dssp HHHHTTSSCE-EEEECCSSHHHHCHHHHHHHHHHHHHTT--CS--EEEEEETTGGGGGTCCHHHHHHHH
T ss_pred HHHHHhcCCE-EEEecCCCCCCCCHHHHHHHHHHHHhcC--CC--eEEEEehhhhhhcCCCHHHHHHHh
Confidence 3334445553 34465543 344444444443322 24 233333222223344555555544
No 493
>3kp1_A D-ornithine aminomutase E component; 5 aminomutase (OAM), metal binding protein; HET: PLP B12 5AD; 2.01A {Clostridium sticklandii} PDB: 3kow_A* 3koy_A* 3koz_A* 3kp0_A* 3kox_A*
Probab=33.23 E-value=2.1e+02 Score=27.93 Aligned_cols=94 Identities=6% Similarity=-0.084 Sum_probs=0.0
Q ss_pred cccCCCcHHHHHHHHHhCCCCeEEEEcCC-Ch-----hHHHHHHHHHHhhcC---CCEEEEeCCCCcccccccccccCCC
Q 025860 128 NVVSGDSLLECASIAESCKRVVSVGINCT-PP-----RFISGLILIIKKVTA---KPILIYPNSGEFYDADRKEWVQNTG 198 (247)
Q Consensus 128 ~l~~G~~~~~~~~~~~~~~~~~avG~NC~-~p-----~~~~~~l~~l~~~~~---~pl~vyPNaG~~~d~~~~~~~~~~~ 198 (247)
.|-...+.+++++.+.+ .++++||+.|. .. ..|..+++.+++..- .++++ +|.+.
T Consensus 639 DLGvdVPpEeIVeAA~E-edADVVGLSsLLTt~dihL~~MkevIelLrE~GlrDkIkVIV---GGa~~------------ 702 (763)
T 3kp1_A 639 YLGTSVPVEKLVDAAIE-LKADAILASTIISHDDIHYKNMKRIHELAVEKGIRDKIMIGC---GGTQV------------ 702 (763)
T ss_dssp ECCSSBCHHHHHHHHHH-TTCSEEEEECCCCGGGHHHHHHHHHHHHHHHTTCTTTSEEEE---ECTTC------------
T ss_pred ECCCCCCHHHHHHHHHH-cCCCEEEEeccccCchhhHHHHHHHHHHHHhcCCCCCCEEEE---ECCCC------------
Q ss_pred CChHHHHHHHHHHHHcCCeEEeecCCCChHHHHHHHHHhhCCCCCCC
Q 025860 199 VSDEDFVSYVSKWCEVGASLVGGCCRTTPNTIKGIYRTLSNRSSVLS 245 (247)
Q Consensus 199 ~~~~~~~~~~~~~~~~G~~iIGGCCGt~P~hI~al~~~l~~~~~~~~ 245 (247)
.++|++ +.|+..+.+-.-..++-++.|.+.+.......|
T Consensus 703 --tqd~Ak------eIGADa~f~DATeAVeVA~~Ll~~l~er~~~~s 741 (763)
T 3kp1_A 703 --TPEVAV------KQGVDAGFGRGSKGIHVATFLVKKRREMREGKS 741 (763)
T ss_dssp --CHHHHH------TTTCSEEECTTCCHHHHHHHHHHHHHHHC----
T ss_pred --CHHHHH------HcCCcEEECCcchHHHHHHHHHHHHHHhhhccc
No 494
>4drs_A Pyruvate kinase; glycolysis, allosteric EN transferase; 2.50A {Cryptosporidium parvum} PDB: 3ma8_A*
Probab=33.23 E-value=1.8e+02 Score=27.22 Aligned_cols=67 Identities=10% Similarity=0.118 Sum_probs=46.5
Q ss_pred CCCCeEEEEecCCcccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCEEEEec-CCCHHHHHHHHHHHHhh--
Q 025860 35 KHRPILVAASVGSYGAYLADGSEYSGNYGDAITVETLKDFHRRRVQVLVESAPDLIAFET-IPNKIEAQAYAELLEEE-- 111 (247)
Q Consensus 35 ~~~~~~VaGsiGP~g~~l~~g~eY~g~y~~~~s~~e~~~~~~~q~~~l~~~gvD~i~~ET-~~~~~E~~aa~~~~~~~-- 111 (247)
..|+..|...|||.-. +.+ .++.|+++|+|++=|-. -.+.++-+..++.+|+.
T Consensus 42 ~~RrTKIv~TlGPas~----------------~~e--------~l~~Li~aGmnv~RlNfSHg~~e~h~~~i~~iR~~~~ 97 (526)
T 4drs_A 42 TQRKTQIICTIGPSCN----------------NVE--------SLIGLIDKGMSVARLNFSHGDHESHFKTLQNIREAAK 97 (526)
T ss_dssp CCCCSEEEEECCGGGC----------------SHH--------HHHHHHHHTCCEEEEETTSSCHHHHHHHHHHHHHHHH
T ss_pred ccCCceEEEeeCCCcC----------------CHH--------HHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHH
Confidence 4578899999999631 333 55567789999998873 44566777777766653
Q ss_pred -CCCCcEEEEEEEcC
Q 025860 112 -NIKIPAWFSFNSKD 125 (247)
Q Consensus 112 -~~~~pv~is~~~~~ 125 (247)
..+.|+-+-+....
T Consensus 98 ~~~~~~vaIl~Dl~G 112 (526)
T 4drs_A 98 ARPHSTVGIMLDTKG 112 (526)
T ss_dssp TCTTCCCEEEEECCC
T ss_pred hcCCCceEEEEECCC
Confidence 12578777777654
No 495
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=33.23 E-value=1.5e+02 Score=23.90 Aligned_cols=30 Identities=23% Similarity=0.251 Sum_probs=18.4
Q ss_pred HHHHHhcCCCCEEEEecCC------CHHHHHHHHHH
Q 025860 78 RVQVLVESAPDLIAFETIP------NKIEAQAYAEL 107 (247)
Q Consensus 78 q~~~l~~~gvD~i~~ET~~------~~~E~~aa~~~ 107 (247)
.++...++|+|++-|--++ ++++++.+.+.
T Consensus 14 da~~a~~~GaD~iGfif~~~SpR~V~~~~a~~i~~~ 49 (205)
T 1nsj_A 14 DALFSVESGADAVGFVFYPKSKRYISPEDARRISVE 49 (205)
T ss_dssp HHHHHHHHTCSEEEEECCTTCTTBCCHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEEecCCCCCcCCHHHHHHHHHh
Confidence 3455667899999887544 44555554433
No 496
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=33.11 E-value=2.2e+02 Score=24.62 Aligned_cols=98 Identities=9% Similarity=-0.147 Sum_probs=0.0
Q ss_pred HHHHHHHHHHhcCCCCEEEEecCC-CHHHHHHHHHHHHh-hCCCCcEEEEEEEcCCCcccCCCcHHHHHHHHHhCCCCeE
Q 025860 73 DFHRRRVQVLVESAPDLIAFETIP-NKIEAQAYAELLEE-ENIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVS 150 (247)
Q Consensus 73 ~~~~~q~~~l~~~gvD~i~~ET~~-~~~E~~aa~~~~~~-~~~~~pv~is~~~~~~~~l~~G~~~~~~~~~~~~~~~~~a 150 (247)
+.+.++++.+.+.|.|.|=+-.-. ++++....++++++ .+.+.++.+.. ..|-++.++++.++.......
T Consensus 148 e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~G~d~~l~vDa--------n~~~~~~~a~~~~~~l~~~~i 219 (371)
T 2ovl_A 148 ADLKTQADRFLAGGFRAIKMKVGRPDLKEDVDRVSALREHLGDSFPLMVDA--------NMKWTVDGAIRAARALAPFDL 219 (371)
T ss_dssp HHHHHHHHHHHHTTCSCEEEECCCSSHHHHHHHHHHHHHHHCTTSCEEEEC--------TTCSCHHHHHHHHHHHGGGCC
T ss_pred HHHHHHHHHHHHcCCCEEEECCCCCCHHHHHHHHHHHHHHhCCCCeEEEEC--------CCCCCHHHHHHHHHHHHhcCC
Q ss_pred EEEcCCChhHHHHHHHHHHhhcCCCEEE
Q 025860 151 VGINCTPPRFISGLILIIKKVTAKPILI 178 (247)
Q Consensus 151 vG~NC~~p~~~~~~l~~l~~~~~~pl~v 178 (247)
.-+.=--+..-...++.+++..+.||+.
T Consensus 220 ~~iEqP~~~~d~~~~~~l~~~~~iPI~~ 247 (371)
T 2ovl_A 220 HWIEEPTIPDDLVGNARIVRESGHTIAG 247 (371)
T ss_dssp SEEECCSCTTCHHHHHHHHHHHCSCEEE
T ss_pred CEEECCCCcccHHHHHHHHhhCCCCEEe
No 497
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=32.90 E-value=1.9e+02 Score=24.73 Aligned_cols=66 Identities=18% Similarity=0.086 Sum_probs=38.6
Q ss_pred HhcCCCCEEEEecCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCcHHH---HHHHHHhCCCCeEEEEcCC-C
Q 025860 82 LVESAPDLIAFETIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDSLLE---CASIAESCKRVVSVGINCT-P 157 (247)
Q Consensus 82 l~~~gvD~i~~ET~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~~~~---~~~~~~~~~~~~avG~NC~-~ 157 (247)
|.+..+|++++=| |+-.-...+.++++. +++|++ . .+ ...++++ .++..++......+|.|.. .
T Consensus 63 l~~~~vD~V~i~t-p~~~H~~~~~~al~a---GkhV~~----E-KP---la~~~~e~~~l~~~a~~~g~~~~v~~~~r~~ 130 (352)
T 3kux_A 63 FNDPSIDLIVIPT-PNDTHFPLAQSALAA---GKHVVV----D-KP---FTVTLSQANALKEHADDAGLLLSVFHNRRWD 130 (352)
T ss_dssp HHCSSCCEEEECS-CTTTHHHHHHHHHHT---TCEEEE----C-SS---CCSCHHHHHHHHHHHHHTTCCEEECCGGGGC
T ss_pred hcCCCCCEEEEeC-ChHHHHHHHHHHHHC---CCcEEE----E-CC---CcCCHHHHHHHHHHHHHcCCeEEEEeecccC
Confidence 3456899999888 555556777777764 467764 2 12 2334444 4444444334467777765 5
Q ss_pred hh
Q 025860 158 PR 159 (247)
Q Consensus 158 p~ 159 (247)
|.
T Consensus 131 p~ 132 (352)
T 3kux_A 131 SD 132 (352)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 498
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=32.87 E-value=73 Score=27.26 Aligned_cols=45 Identities=13% Similarity=0.141 Sum_probs=25.8
Q ss_pred HHHHHHHHHhcCCCCEEEEec--CCCHHHHHHHHHHHHhhCCCCcEEEEE
Q 025860 74 FHRRRVQVLVESAPDLIAFET--IPNKIEAQAYAELLEEENIKIPAWFSF 121 (247)
Q Consensus 74 ~~~~q~~~l~~~gvD~i~~ET--~~~~~E~~aa~~~~~~~~~~~pv~is~ 121 (247)
.|.+.+..++++|.++| +|. -.++.|++.+++++++. ++.+++.+
T Consensus 76 ~h~~~~~~al~~gk~v~-~EKP~~~~~~e~~~l~~~a~~~--g~~~~v~~ 122 (344)
T 3ezy_A 76 THSELVIACAKAKKHVF-CEKPLSLNLADVDRMIEETKKA--DVILFTGF 122 (344)
T ss_dssp GHHHHHHHHHHTTCEEE-EESCSCSCHHHHHHHHHHHHHH--TCCEEEEC
T ss_pred chHHHHHHHHhcCCeEE-EECCCCCCHHHHHHHHHHHHHh--CCcEEEee
Confidence 45566666666776654 463 35566777766666654 24444443
No 499
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=32.61 E-value=1e+02 Score=30.46 Aligned_cols=104 Identities=12% Similarity=0.097 Sum_probs=60.2
Q ss_pred CCHHHHHHHHHHHHHHHhc------CCCCEEEEecCCCH-----HHHHHHHHHHHhhCCCCcEEEEEEEcCCCcccCCCc
Q 025860 66 ITVETLKDFHRRRVQVLVE------SAPDLIAFETIPNK-----IEAQAYAELLEEENIKIPAWFSFNSKDGVNVVSGDS 134 (247)
Q Consensus 66 ~s~~e~~~~~~~q~~~l~~------~gvD~i~~ET~~~~-----~E~~aa~~~~~~~~~~~pv~is~~~~~~~~l~~G~~ 134 (247)
++.+++.+.|+..++.+.+ .+.|++++|....+ .+ ....++++.. +.||++-.... .| .
T Consensus 175 ~~~~~i~~~~~~~l~~~a~~~~~~~~~~D~vvVEGaGGl~~p~~~~-~~~adla~~l--~~PVILV~d~~------lG-~ 244 (831)
T 4a0g_A 175 VEDSVVLQMIEKCLKEEMECGVKSEKSDLLCLVETAGGVASPGPSG-TLQCDLYRPF--RLPGILVGDGR------LG-G 244 (831)
T ss_dssp CCHHHHHHHHHHHHHHHC---------CEEEEEECCSSTTCBCTTS-CBHHHHTGGG--CCCEEEECCCS------TT-H
T ss_pred CCHHHHHHHHHHHHHhhhhccccccccCCEEEEECCCCccCCCCCC-ccHHHHHHHc--CCCEEEEECCC------Cc-H
Confidence 4778888888765655432 16899999985521 12 1335677776 68998766442 12 2
Q ss_pred HHHHH---HHHHh-CCCCeEEEEcCCChhHHHHHHHHHHhhcCCCEEEEeC
Q 025860 135 LLECA---SIAES-CKRVVSVGINCTPPRFISGLILIIKKVTAKPILIYPN 181 (247)
Q Consensus 135 ~~~~~---~~~~~-~~~~~avG~NC~~p~~~~~~l~~l~~~~~~pl~vyPN 181 (247)
+..++ +.+.. ...+.+|-+|-.++.....+.+.+.+ ..|+.+.|-
T Consensus 245 i~~~~lt~~~l~~~g~~v~GvI~N~~~~~~~~~l~~~l~~--~~~v~vLg~ 293 (831)
T 4a0g_A 245 ISGTIAAYESLKLRGYDIAAVVFEDHGLVNEVPLTSYLRN--KVPVLVLPP 293 (831)
T ss_dssp HHHHHHHHHHHHTTTCCEEEEEEECCSSCTHHHHHHHTTT--SSCEEEECC
T ss_pred HHHHHHHHHHHHHCCCcEEEEEEeCCchhHHHHHHHHHHh--CCCceeeCC
Confidence 33222 22322 23456788897666666666666654 456555554
No 500
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=32.56 E-value=1.8e+02 Score=23.78 Aligned_cols=86 Identities=9% Similarity=0.030 Sum_probs=51.1
Q ss_pred HHHHHhcCCCCEEEEe-----cCCCHHHHHHHHHHHHhhCCCCcEEEEEEEcCCC-----------ccc---CCC-cHHH
Q 025860 78 RVQVLVESAPDLIAFE-----TIPNKIEAQAYAELLEEENIKIPAWFSFNSKDGV-----------NVV---SGD-SLLE 137 (247)
Q Consensus 78 q~~~l~~~gvD~i~~E-----T~~~~~E~~aa~~~~~~~~~~~pv~is~~~~~~~-----------~l~---~G~-~~~~ 137 (247)
.++.+.++|+|++=+- .+|++..-..+++.+|+..+++|+-+-+-+.+.. .+. ... .+..
T Consensus 23 ~i~~~~~~g~d~iHvDvmDg~fvpn~t~G~~~v~~lr~~~p~~~~dvhLmv~dp~~~i~~~~~Ad~itvH~ea~~~~~~~ 102 (227)
T 1tqx_A 23 ETQRMESLGAEWIHLDVMDMHFVPNLSFGPPVINNLKKYTKSIFFDVHLMVEYPEKYVPLLKTSNQLTFHFEALNEDTER 102 (227)
T ss_dssp HHHHHHHTTCSEEEEEEEBSSSSSCBCCCHHHHHHHGGGCSSCEEEEEEESSCGGGGGGGCTTSSEEEEEGGGGTTCHHH
T ss_pred HHHHHHHcCCCEEEEEEEeCCcCcchhcCHHHHHHHHHhCCCCcEEEEEEEcCHHHHHHHHHhCCEEEEeecCCccCHHH
Confidence 6667777898876333 2356665567778888764468888888776632 111 122 4666
Q ss_pred HHH---HHHhCCCC-eEEEEcCCC-hhHHHHH
Q 025860 138 CAS---IAESCKRV-VSVGINCTP-PRFISGL 164 (247)
Q Consensus 138 ~~~---~~~~~~~~-~avG~NC~~-p~~~~~~ 164 (247)
.++ .+++. |. .+|-+|... .+.+.++
T Consensus 103 ~i~~~~~i~~~-G~k~gvalnp~tp~~~~~~~ 133 (227)
T 1tqx_A 103 CIQLAKEIRDN-NLWCGISIKPKTDVQKLVPI 133 (227)
T ss_dssp HHHHHHHHHTT-TCEEEEEECTTSCGGGGHHH
T ss_pred HHHHHHHHHHc-CCeEEEEeCCCCcHHHHHHH
Confidence 777 77663 44 356666643 3444444
Done!