Query 025863
Match_columns 247
No_of_seqs 143 out of 1138
Neff 7.2
Searched_HMMs 29240
Date Mon Mar 25 19:17:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025863.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025863hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2w1v_A Nitrilase-2, nitrilase 100.0 7.3E-33 2.5E-37 244.0 17.0 159 80-246 1-159 (276)
2 1f89_A 32.5 kDa protein YLR351 100.0 5.5E-32 1.9E-36 239.9 15.1 162 79-246 7-175 (291)
3 3p8k_A Hydrolase, carbon-nitro 100.0 1.2E-31 4E-36 237.6 17.1 158 74-246 12-172 (281)
4 2vhh_A CG3027-PA; hydrolase; 2 100.0 4.7E-31 1.6E-35 245.3 16.5 197 28-246 26-240 (405)
5 3ivz_A Nitrilase; alpha-beta s 100.0 8.1E-30 2.8E-34 223.1 17.9 146 83-246 2-152 (262)
6 2e11_A Hydrolase; dimethylarse 100.0 6.4E-30 2.2E-34 223.8 17.2 148 80-246 1-149 (266)
7 3hkx_A Amidase; alpha-beta-BET 100.0 1.3E-30 4.4E-35 231.1 12.0 154 76-246 14-171 (283)
8 1ems_A Nitfhit, NIT-fragIle hi 100.0 2.7E-29 9.4E-34 235.0 15.3 159 80-246 12-175 (440)
9 1uf5_A N-carbamyl-D-amino acid 100.0 6.5E-28 2.2E-32 214.4 16.8 159 82-246 3-177 (303)
10 3ilv_A Glutamine-dependent NAD 99.9 3.3E-27 1.1E-31 230.5 18.3 151 80-246 3-171 (634)
11 4f4h_A Glutamine dependent NAD 99.9 3.4E-26 1.2E-30 220.7 19.1 150 81-246 5-175 (565)
12 3n05_A NH(3)-dependent NAD(+) 99.9 1.7E-26 5.9E-31 223.7 16.2 149 81-245 3-168 (590)
13 3sdb_A Glutamine-dependent NAD 99.9 3.3E-26 1.1E-30 224.9 15.1 153 81-246 11-183 (680)
14 2dyu_A Formamidase; AMIF, CEK, 99.9 8.7E-26 3E-30 204.7 15.5 147 81-246 12-172 (334)
15 2uxy_A Aliphatic amidase; nitr 99.9 4.7E-26 1.6E-30 207.1 13.7 148 80-246 10-172 (341)
16 3hkx_A Amidase; alpha-beta-BET 87.5 2.7 9.1E-05 36.0 9.0 70 106-192 173-243 (283)
17 3p8k_A Hydrolase, carbon-nitro 81.9 5.9 0.0002 33.7 8.5 70 107-193 175-245 (281)
18 2uxy_A Aliphatic amidase; nitr 79.8 6.3 0.00022 34.7 8.2 71 106-193 174-245 (341)
19 3n05_A NH(3)-dependent NAD(+) 74.9 11 0.00037 35.8 8.8 73 106-193 172-245 (590)
20 3obe_A Sugar phosphate isomera 74.8 14 0.00049 31.5 8.9 73 83-166 90-168 (305)
21 3ivz_A Nitrilase; alpha-beta s 74.7 8.1 0.00028 32.3 7.1 67 107-193 155-222 (262)
22 3cqj_A L-ribulose-5-phosphate 71.7 12 0.00042 31.3 7.6 62 97-166 104-165 (295)
23 2dyu_A Formamidase; AMIF, CEK, 70.7 9.5 0.00032 33.4 6.8 71 106-193 174-245 (334)
24 4f4h_A Glutamine dependent NAD 70.7 8.6 0.0003 36.5 7.0 73 106-193 177-250 (565)
25 1f89_A 32.5 kDa protein YLR351 66.1 11 0.00039 31.8 6.2 70 107-193 178-250 (291)
26 2e11_A Hydrolase; dimethylarse 66.0 29 0.00098 28.8 8.7 63 114-193 165-229 (266)
27 3tva_A Xylose isomerase domain 64.9 21 0.00072 29.7 7.6 62 96-167 97-158 (290)
28 1ems_A Nitfhit, NIT-fragIle hi 64.7 22 0.00076 32.1 8.2 72 106-193 177-250 (440)
29 1uf5_A N-carbamyl-D-amino acid 64.5 36 0.0012 28.6 9.2 43 151-193 217-260 (303)
30 3p94_A GDSL-like lipase; serin 62.0 37 0.0013 26.0 8.2 77 83-165 75-159 (204)
31 2w1v_A Nitrilase-2, nitrilase 60.4 20 0.00068 30.0 6.6 70 107-192 162-233 (276)
32 3ngf_A AP endonuclease, family 60.1 59 0.002 26.6 9.6 63 96-167 88-150 (269)
33 1iuq_A Glycerol-3-phosphate ac 59.5 27 0.00091 31.4 7.5 66 95-165 204-271 (367)
34 3kws_A Putative sugar isomeras 58.8 33 0.0011 28.4 7.7 64 97-167 100-165 (287)
35 1i60_A IOLI protein; beta barr 56.1 28 0.00095 28.4 6.8 61 97-167 80-142 (278)
36 3qc0_A Sugar isomerase; TIM ba 55.0 26 0.00089 28.6 6.4 65 96-167 78-142 (275)
37 1k77_A EC1530, hypothetical pr 53.8 49 0.0017 26.7 7.9 61 96-166 80-142 (260)
38 3l23_A Sugar phosphate isomera 50.4 49 0.0017 27.9 7.6 60 96-166 103-164 (303)
39 4fva_A 5'-tyrosyl-DNA phosphod 49.8 11 0.00039 30.0 3.2 39 83-124 12-54 (256)
40 3cny_A Inositol catabolism pro 49.0 60 0.002 26.8 7.8 65 96-166 85-159 (301)
41 3u0h_A Xylose isomerase domain 48.8 34 0.0012 28.0 6.1 63 96-167 79-141 (281)
42 3g12_A Putative lactoylglutath 48.8 39 0.0013 24.4 5.8 42 150-195 77-119 (128)
43 2q02_A Putative cytoplasmic pr 48.1 75 0.0026 25.7 8.2 71 83-166 65-138 (272)
44 3ey7_A Biphenyl-2,3-DIOL 1,2-d 47.4 53 0.0018 22.9 6.4 46 150-195 84-129 (133)
45 3rjt_A Lipolytic protein G-D-S 47.0 48 0.0016 25.4 6.5 61 96-165 112-172 (216)
46 2o3h_A DNA-(apurinic or apyrim 46.3 43 0.0015 27.4 6.4 39 84-126 28-67 (285)
47 3ayv_A Putative uncharacterize 46.3 30 0.001 28.1 5.4 64 96-166 71-135 (254)
48 3dx5_A Uncharacterized protein 45.0 66 0.0023 26.4 7.4 64 94-167 77-142 (286)
49 3vni_A Xylose isomerase domain 43.9 92 0.0032 25.5 8.2 63 97-167 84-151 (294)
50 2hk0_A D-psicose 3-epimerase; 43.7 1E+02 0.0035 25.7 8.5 66 96-167 102-170 (309)
51 3bdk_A D-mannonate dehydratase 43.4 84 0.0029 28.2 8.2 41 83-123 78-126 (386)
52 3huh_A Virulence protein STM31 42.8 60 0.0021 23.6 6.2 46 150-195 97-142 (152)
53 1vli_A Spore coat polysacchari 41.8 45 0.0015 30.2 6.0 70 97-167 40-120 (385)
54 3ilv_A Glutamine-dependent NAD 41.1 25 0.00084 33.8 4.5 72 107-193 175-247 (634)
55 2vhh_A CG3027-PA; hydrolase; 2 41.0 30 0.001 31.1 4.9 44 108-167 244-287 (405)
56 2j6v_A UV endonuclease, UVDE; 41.0 1.2E+02 0.004 26.0 8.6 64 97-167 57-122 (301)
57 1wdu_A TRAS1 ORF2P; four-layer 40.3 28 0.00095 28.1 4.2 38 85-126 20-57 (245)
58 3hp4_A GDSL-esterase; psychrot 39.9 1.1E+02 0.0038 22.8 7.6 69 84-165 68-141 (185)
59 4f1h_A Tyrosyl-DNA phosphodies 39.7 14 0.00049 28.7 2.3 39 82-123 3-43 (250)
60 2qw5_A Xylose isomerase-like T 38.9 1.2E+02 0.004 25.7 8.2 68 96-166 104-182 (335)
61 1xla_A D-xylose isomerase; iso 36.8 98 0.0034 27.2 7.6 63 97-166 112-179 (394)
62 1k7c_A Rhamnogalacturonan acet 36.6 1.1E+02 0.0038 24.4 7.4 19 147-165 149-167 (233)
63 4gew_A 5'-tyrosyl-DNA phosphod 36.0 24 0.00082 31.1 3.3 41 81-124 116-160 (362)
64 1hd7_A DNA-(apurinic or apyrim 34.6 59 0.002 27.4 5.5 40 83-126 60-100 (318)
65 3zw5_A Glyoxalase domain-conta 34.5 1E+02 0.0036 22.3 6.4 44 150-193 101-144 (147)
66 4hf7_A Putative acylhydrolase; 33.3 1.7E+02 0.0058 22.7 8.3 65 95-165 99-164 (209)
67 1tz9_A Mannonate dehydratase; 33.1 2.4E+02 0.0081 24.3 9.8 38 83-120 69-114 (367)
68 3mil_A Isoamyl acetate-hydroly 33.0 1E+02 0.0034 24.1 6.4 62 95-165 94-167 (240)
69 1vyb_A ORF2 contains A reverse 31.8 84 0.0029 24.4 5.7 39 85-126 8-47 (238)
70 3sk2_A EHPR; antibiotic resist 31.8 1.3E+02 0.0046 21.1 7.1 44 148-195 84-130 (132)
71 3rri_A Glyoxalase/bleomycin re 31.7 1.3E+02 0.0045 21.0 6.5 47 148-195 79-127 (135)
72 3kol_A Oxidoreductase, glyoxal 30.9 1.4E+02 0.0048 21.2 6.6 43 149-195 108-150 (156)
73 2zds_A Putative DNA-binding pr 30.6 83 0.0028 26.4 5.8 67 97-166 107-178 (340)
74 2qul_A D-tagatose 3-epimerase; 30.2 63 0.0022 26.4 4.9 66 96-167 83-152 (290)
75 2ggt_A SCO1 protein homolog, m 30.0 1.3E+02 0.0043 21.9 6.2 105 84-195 24-144 (164)
76 4g6x_A Glyoxalase/bleomycin re 29.7 1.5E+02 0.005 21.7 6.6 41 151-195 110-150 (155)
77 3teb_A Endonuclease/exonucleas 28.9 71 0.0024 25.4 4.9 41 82-125 3-45 (266)
78 4eo3_A Bacterioferritin comigr 28.7 60 0.0021 28.1 4.6 21 179-199 103-123 (322)
79 1ivn_A Thioesterase I; hydrola 28.5 1.7E+02 0.0058 21.9 6.9 69 84-165 64-137 (190)
80 4gz1_A Tyrosyl-DNA phosphodies 28.0 34 0.0012 26.9 2.7 39 82-123 9-49 (256)
81 3ixr_A Bacterioferritin comigr 27.7 26 0.00087 27.2 1.8 28 94-121 65-92 (179)
82 3mpr_A Putative endonuclease/e 27.0 98 0.0033 25.6 5.6 23 102-124 31-53 (298)
83 3gfo_A Cobalt import ATP-bindi 27.0 1.8E+02 0.0062 24.4 7.3 73 107-194 154-226 (275)
84 1g6h_A High-affinity branched- 26.1 2.3E+02 0.008 23.2 7.8 70 107-192 164-233 (257)
85 3qxb_A Putative xylose isomera 26.1 62 0.0021 27.2 4.2 66 97-166 110-177 (316)
86 3r6a_A Uncharacterized protein 26.1 1.9E+02 0.0066 21.1 7.2 42 150-195 76-117 (144)
87 3tui_C Methionine import ATP-b 25.4 83 0.0029 28.0 5.0 70 109-193 176-245 (366)
88 2q0q_A ARYL esterase; SGNH hyd 25.3 1.9E+02 0.0066 22.0 6.8 73 84-165 85-180 (216)
89 3lmz_A Putative sugar isomeras 25.3 2.6E+02 0.0089 22.3 8.6 37 77-119 12-48 (257)
90 2o14_A Hypothetical protein YX 25.0 1.9E+02 0.0065 25.3 7.3 75 84-165 232-313 (375)
91 2eja_A URO-D, UPD, uroporphyri 24.6 68 0.0023 27.6 4.2 53 105-166 183-236 (338)
92 4hc5_A Glyoxalase/bleomycin re 24.4 1.3E+02 0.0044 20.7 5.2 43 150-195 90-132 (133)
93 3dmy_A Protein FDRA; predicted 24.4 1.1E+02 0.0036 28.4 5.6 47 100-167 46-92 (480)
94 2yv1_A Succinyl-COA ligase [AD 23.6 1.8E+02 0.0062 24.7 6.7 45 101-166 81-126 (294)
95 1muw_A Xylose isomerase; atomi 23.6 2.1E+02 0.0071 24.9 7.3 64 96-166 111-179 (386)
96 3g8r_A Probable spore coat pol 22.4 80 0.0027 28.1 4.2 70 98-167 18-97 (350)
97 1j5p_A Aspartate dehydrogenase 22.4 1E+02 0.0035 26.0 4.7 47 101-166 71-117 (253)
98 3tif_A Uncharacterized ABC tra 22.3 2E+02 0.0069 23.3 6.5 73 107-195 156-228 (235)
99 4gym_A Glyoxalase/bleomycin re 21.9 1.8E+02 0.0061 20.9 5.7 43 148-194 89-131 (149)
100 2r91_A 2-keto-3-deoxy-(6-phosp 21.9 1.8E+02 0.0061 24.5 6.3 58 99-172 75-133 (286)
101 1f9z_A Glyoxalase I; beta-alph 21.6 2E+02 0.007 19.7 6.6 45 150-196 82-126 (135)
102 3cpr_A Dihydrodipicolinate syn 21.5 1.7E+02 0.006 24.9 6.2 56 99-171 96-152 (304)
103 3g91_A MTH0212, exodeoxyribonu 21.2 1.2E+02 0.004 24.5 4.8 18 108-125 24-41 (265)
104 2vc6_A MOSA, dihydrodipicolina 21.0 1.8E+02 0.0063 24.5 6.2 55 99-170 80-135 (292)
105 1xky_A Dihydrodipicolinate syn 20.9 1.7E+02 0.0058 24.9 6.0 56 99-171 92-148 (301)
106 3rhe_A NAD-dependent benzaldeh 20.9 2.5E+02 0.0084 20.4 6.9 44 148-195 79-122 (148)
107 2ihy_A ABC transporter, ATP-bi 20.8 2.6E+02 0.0089 23.3 7.1 71 107-193 172-244 (279)
108 2inf_A URO-D, UPD, uroporphyri 20.5 1.1E+02 0.0038 26.6 4.8 52 105-165 197-248 (359)
109 4g1u_C Hemin import ATP-bindin 20.3 1.7E+02 0.0057 24.4 5.7 67 114-195 165-231 (266)
110 3d0c_A Dihydrodipicolinate syn 20.3 2E+02 0.0068 24.7 6.3 51 99-166 91-142 (314)
111 3p6l_A Sugar phosphate isomera 20.2 1.5E+02 0.0051 23.8 5.3 57 83-166 77-133 (262)
112 2yz2_A Putative ABC transporte 20.2 3E+02 0.01 22.6 7.3 72 106-193 148-219 (266)
113 3nav_A Tryptophan synthase alp 20.1 1.1E+02 0.0038 25.9 4.5 41 103-165 114-154 (271)
No 1
>2w1v_A Nitrilase-2, nitrilase homolog 2; hydrolase; 1.49A {Mus musculus}
Probab=100.00 E-value=7.3e-33 Score=243.98 Aligned_cols=159 Identities=48% Similarity=0.769 Sum_probs=142.4
Q ss_pred CCceEEEEEecccccCHHHHHHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCCCcchhhhhhccCCCChHHHHHHHHHHHh
Q 025863 80 VAKFKVGLCQLSVTADKERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARL 159 (247)
Q Consensus 80 ~~~~kValvQ~~i~~d~~~n~~~i~~~i~~Aa~~gadLVVfPE~~l~g~~~~~~~~~~e~~~~~~~~~~~~~~l~~~Ar~ 159 (247)
|++||||++|+++.+|.++|++++.+++++|++.++|||||||++++||..++...+++.++ ++.++.|+++|++
T Consensus 1 M~~~~va~vQ~~~~~d~~~n~~~~~~~i~~a~~~gadlvv~PE~~~~gy~~~~~~~~~~~~~-----~~~~~~l~~~a~~ 75 (276)
T 2w1v_A 1 MSTFRLALIQLQVSSIKSDNLTRACSLVREAAKQGANIVSLPECFNSPYGTTYFPDYAEKIP-----GESTQKLSEVAKE 75 (276)
T ss_dssp CCEEEEEEEECCCCSCHHHHHHHHHHHHHHHHHTTCSEEECCTTTTSCCSTTTHHHHCBCSS-----SHHHHHHHHHHHH
T ss_pred CCccEEEEEeccccCCHHHHHHHHHHHHHHHHHCCCCEEEcCCCcccCCCHHHHHHHhccCC-----CHHHHHHHHHHHH
Confidence 45799999999988999999999999999999999999999999999998766544444432 5899999999999
Q ss_pred cCcEEEEeeeeeecCCeeEEEEEEEccCCcEEEEEeccccCCCCCCCCcccccccccccCCCCeEEEeCCeEEeccccce
Q 025863 160 LKITIVGGSIPERSGDRLYNTCCVFGSDGKLIAKHRKIHLFDIDIPGKITFIESKSLTAGETPTIVDTGLMFLLFYNGLI 239 (247)
Q Consensus 160 ~~i~Iv~Gs~~e~~~~~~yNsa~li~p~G~il~~Y~K~hL~~~~vP~~~~~~E~~~f~~G~~~~vf~~~~grig~~~~lI 239 (247)
+++++++|++++++++++||++++|+|+|+++..|+|+|||+.+||++..+.|..+|++|++..+|+++++|+|+ +|
T Consensus 76 ~~~~iv~G~~~~~~~~~~yNs~~~i~~~G~i~~~y~K~hL~~~~vP~~e~~~E~~~f~~G~~~~v~~~~~~~ig~---~I 152 (276)
T 2w1v_A 76 SSIYLIGGSIPEEDAGKLYNTCSVFGPDGSLLVKHRKIHLFDIDVPGKITFQESKTLSPGDSFSTFDTPYCKVGL---GI 152 (276)
T ss_dssp HTSEEECCCEEEEETTEEEEEEEEECTTSCEEEEEECSSCCEEEETTTEEEEGGGTCCCCCCCCEEECSSCEEEE---CC
T ss_pred cCeEEEecceeecCCCcEEEEEEEECCCCcEEEEEecccccCcccCccccccccccccCCCCceeEEeCCceEEE---EE
Confidence 999999997777778899999999999999999999999998777877778899999999999999999999988 99
Q ss_pred ecccccc
Q 025863 240 SFSQIIH 246 (247)
Q Consensus 240 CyD~~~~ 246 (247)
|||...+
T Consensus 153 CyD~~fp 159 (276)
T 2w1v_A 153 CYDMRFA 159 (276)
T ss_dssp GGGGGCH
T ss_pred EeccccH
Confidence 9998653
No 2
>1f89_A 32.5 kDa protein YLR351C; nitrilase, dimer, structural genomics, four layer sandwich, PSI, protein structure initiative; 2.40A {Saccharomyces cerevisiae} SCOP: d.160.1.1
Probab=99.98 E-value=5.5e-32 Score=239.86 Aligned_cols=162 Identities=46% Similarity=0.690 Sum_probs=131.7
Q ss_pred CCCceEEEEEecc-cccCHHHHHHHHHHHHHHH--HHCCCeEEEcCCCCCCCCCCCCcchhhhhhccCCCC--hHHHHHH
Q 025863 79 PVAKFKVGLCQLS-VTADKERNIAHARRAIEEA--AEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDA--SPSTAML 153 (247)
Q Consensus 79 ~~~~~kValvQ~~-i~~d~~~n~~~i~~~i~~A--a~~gadLVVfPE~~l~g~~~~~~~~~~e~~~~~~~~--~~~~~~l 153 (247)
|.++||||++|++ ..+|.+.|++++.+++++| ++.|+|||||||++++||...++..+++.+. .. ++..+.|
T Consensus 7 m~~~~~va~vQ~~~~~~d~~~n~~~~~~~i~~a~~~~~gadlvv~PE~~~~g~~~~~~~~~~~~~~---~~~~~~~~~~l 83 (291)
T 1f89_A 7 LSQKIKVALVQLSGSSPDKMANLQRAATFIERAMKEQPDTKLVVLPECFNSPYSTDQFRKYSEVIN---PKEPSTSVQFL 83 (291)
T ss_dssp BSSCEEEEEEECCCCCSCHHHHHHHHHHHHHHHHHHCTTEEEEECCTTTTSCSCHHHHHHHTTBCC---SSSCCHHHHHH
T ss_pred ccccceEEEEeccCCcCCHHHHHHHHHHHHHHHhhccCCCeEEEcCCCcccCCChHHHHHHhhhhc---cCCCChHHHHH
Confidence 3456999999999 5689999999999999999 8889999999999999986544333334320 01 4899999
Q ss_pred HHHHHhcCcEEEEeeeeeecC--CeeEEEEEEEccCCcEEEEEeccccCCCCCCCCcccccccccccCCCCeEEEeCCeE
Q 025863 154 SEVARLLKITIVGGSIPERSG--DRLYNTCCVFGSDGKLIAKHRKIHLFDIDIPGKITFIESKSLTAGETPTIVDTGLMF 231 (247)
Q Consensus 154 ~~~Ar~~~i~Iv~Gs~~e~~~--~~~yNsa~li~p~G~il~~Y~K~hL~~~~vP~~~~~~E~~~f~~G~~~~vf~~~~gr 231 (247)
+++|+++++++++|+++++++ +++||++++|+|+|++++.|+|+|||+..+|.+..+.|..+|++|++..+|+++++|
T Consensus 84 ~~~a~~~~~~iv~G~~~~~~~~~~~~yNs~~~i~~~G~i~~~y~K~hLf~e~~P~~~~~~E~~~f~~G~~~~v~~~~~~~ 163 (291)
T 1f89_A 84 SNLANKFKIILVGGTIPELDPKTDKIYNTSIIFNEDGKLIDKHRKVHLFDVDIPNGISFHESETLSPGEKSTTIDTKYGK 163 (291)
T ss_dssp HHHHHHSSCEEECCCEEEECTTTCCEEEEEEEECTTSCEEEEEECCCCC----------HHHHSCCCCCCCEEEEETTEE
T ss_pred HHHHHHcCcEEEeceeecccCCCCceEEEEEEECCCCcEEeEEeeeccCCCccCccccccccccccCCCCCceEecCCee
Confidence 999999999999997777665 789999999999999999999999998778877778899999999999999999999
Q ss_pred Eeccccceecccccc
Q 025863 232 LLFYNGLISFSQIIH 246 (247)
Q Consensus 232 ig~~~~lICyD~~~~ 246 (247)
+|+ +||||...|
T Consensus 164 ig~---~ICyD~~fp 175 (291)
T 1f89_A 164 FGV---GICYDMRFP 175 (291)
T ss_dssp EEE---CCGGGGGCH
T ss_pred EEE---EEecccCch
Confidence 988 999998653
No 3
>3p8k_A Hydrolase, carbon-nitrogen family; HET: PGE; 1.70A {Staphylococcus aureus subsp}
Probab=99.98 E-value=1.2e-31 Score=237.59 Aligned_cols=158 Identities=24% Similarity=0.399 Sum_probs=139.0
Q ss_pred CCCCCCCCceEEEEEecccc-cCHHHHHHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCCCcchhhhhhccCCCChHHHHH
Q 025863 74 PLPTPPVAKFKVGLCQLSVT-ADKERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAM 152 (247)
Q Consensus 74 ~~~~~~~~~~kValvQ~~i~-~d~~~n~~~i~~~i~~Aa~~gadLVVfPE~~l~g~~~~~~~~~~e~~~~~~~~~~~~~~ 152 (247)
+.+.+.+.+||||++|+++. +|.++|++++.+++++|++.|+|||||||++++||..+++...++.. .++.++.
T Consensus 12 ~~~~~~~~~~kva~~Q~~~~~~d~~~Nl~~~~~~i~~A~~~gadlvvfPE~~l~gy~~~~~~~~a~~~-----~~~~~~~ 86 (281)
T 3p8k_A 12 SGLVPRGSHMKVQIYQLPIVFGDSSKNETQITQWFEKNMNAEVDVVVLPEMWNNGYDLEHLNEKADNN-----LGQSFSF 86 (281)
T ss_dssp --CCCTTSEEEEEEEECCCCTTCHHHHHHHHHHHHHHHCCTTCCEEECCSSTTTTTCGGGHHHHSEET-----THHHHHH
T ss_pred ccccccCCCcEEEEEeccCCcCCHHHHHHHHHHHHHHHHhCCCcEEEcCCCccCCCChhHHHHhhhcc-----CcHHHHH
Confidence 34556777899999999986 89999999999999999999999999999999999876554454443 3689999
Q ss_pred HHHHHHhcCcEEEEeeeeeecCCeeEEEEEEEccCCcEEEEEeccccCCCCCCCCcccccccccccCCCC-eEEEe-CCe
Q 025863 153 LSEVARLLKITIVGGSIPERSGDRLYNTCCVFGSDGKLIAKHRKIHLFDIDIPGKITFIESKSLTAGETP-TIVDT-GLM 230 (247)
Q Consensus 153 l~~~Ar~~~i~Iv~Gs~~e~~~~~~yNsa~li~p~G~il~~Y~K~hL~~~~vP~~~~~~E~~~f~~G~~~-~vf~~-~~g 230 (247)
|+++|+++++++++|+..+++++++||++++|+|+|++++.|+|+||+++ |.|..+|++|++. .+|++ +++
T Consensus 87 l~~la~~~~i~iv~G~~~~~~~~~~yNs~~~i~~~G~i~~~y~K~hL~~~-------f~E~~~f~~G~~~~~v~~~~~~~ 159 (281)
T 3p8k_A 87 IKHLAEKYKVDIVAGSVSNIRNNQIFNTAFSVNKSGQLINEYDKVHLVPM-------LREHEFLTAGEYVAEPFQLSDGT 159 (281)
T ss_dssp HHHHHHHHTCEEEEEEEEEEETTEEEEEEEEECTTSCEEEEEECSCCCTT-------TTGGGTCCCCSSCCCCEECTTCC
T ss_pred HHHHHhhCCeEEEEeeeEEccCCcEEEEEEEEcCCCeEEEEEeeEECCCC-------cCccccCcCCCCCceeEEeCCCc
Confidence 99999999999999976677889999999999999999999999999762 5899999999998 99999 999
Q ss_pred EEeccccceecccccc
Q 025863 231 FLLFYNGLISFSQIIH 246 (247)
Q Consensus 231 rig~~~~lICyD~~~~ 246 (247)
|+|+ +||||...|
T Consensus 160 ~ig~---~IC~D~~fp 172 (281)
T 3p8k_A 160 YVTQ---LICYDLRFP 172 (281)
T ss_dssp EEEE---EEGGGGGCT
T ss_pred EEEE---EEecCCCCc
Confidence 9988 999998754
No 4
>2vhh_A CG3027-PA; hydrolase; 2.8A {Drosophila melanogaster} PDB: 2vhi_A
Probab=99.97 E-value=4.7e-31 Score=245.30 Aligned_cols=197 Identities=24% Similarity=0.397 Sum_probs=148.8
Q ss_pred cceeccCCC-CccCChhhhhhcCCCCCCCCCCCCCCCCccCCCCCCCCCCCCCCCceEEEEEecccc--------cCHHH
Q 025863 28 RSIFLGKAK-PVFQSPPLIRTHSSNPNPNPIMASSSKPEQARAPPALPLPTPPVAKFKVGLCQLSVT--------ADKER 98 (247)
Q Consensus 28 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kValvQ~~i~--------~d~~~ 98 (247)
+||+||++. +.+.+|. .. -..+...+|..+....... +....+.++||||++|+++. .+.++
T Consensus 26 ~~~~~~~~~~~~~~~~~---~~-----~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~rVAlvQ~~i~~~~~~~~~~d~~~ 96 (405)
T 2vhh_A 26 KRILYGVEEDQTLELPT---SA-----KDIAEQNGFDIKGYRFTAR-EEQTRKRRIVRVGAIQNSIVIPTTAPIEKQREA 96 (405)
T ss_dssp HHHHSSSSSCCBCCCCH---HH-----HHHHHHTTCEEEEEECCCC-CCSSSCCCEEEEEEEECCCCSCSSSCHHHHHHH
T ss_pred HHHhcCCccCccCCCCH---HH-----HHHhhhcCceEeeeeeccc-hhhhcCCCCCEEEEEeccccccccccccccHHH
Confidence 689999998 8888876 22 1234456777666666443 33344455799999999863 46889
Q ss_pred HHHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCCC-----cchhhhhhccCCCChHHHHHHHHHHHhcCcEEEEeeeeeec
Q 025863 99 NIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDS-----FPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGSIPERS 173 (247)
Q Consensus 99 n~~~i~~~i~~Aa~~gadLVVfPE~~l~g~~~~~-----~~~~~e~~~~~~~~~~~~~~l~~~Ar~~~i~Iv~Gs~~e~~ 173 (247)
|++++.+++++|++.|+|||||||++++||.... +..+++... .++.++.|+++|++++++|++| +.+++
T Consensus 97 nl~~~~~li~~A~~~gadLVVfPE~~l~gy~~~~~~~~~~~~~ae~~~----~~~~~~~l~~lA~~~~i~Iv~G-~~e~~ 171 (405)
T 2vhh_A 97 IWNKVKTMIKAAAEAGCNIVCTQEAWTMPFAFCTREKFPWCEFAEEAE----NGPTTKMLAELAKAYNMVIIHS-ILERD 171 (405)
T ss_dssp HHHHHHHHHHHHHHTTCSEEECCTTTTSCSCC---------CCCBCTT----TSHHHHHHHHHHHHTTCEEEEE-EEEEE
T ss_pred HHHHHHHHHHHHHHCCCCEEEcCCcccccccccccchhhHHHHHhhcc----CCHHHHHHHHHHHHCCEEEEEe-ceecc
Confidence 9999999999999999999999999999985421 123333331 3589999999999999999999 56665
Q ss_pred ---CCeeEEEEEEEccCCcEEEEEeccccCCCCCCCCcccccccccccCCC-CeEEEeCCeEEeccccceecccccc
Q 025863 174 ---GDRLYNTCCVFGSDGKLIAKHRKIHLFDIDIPGKITFIESKSLTAGET-PTIVDTGLMFLLFYNGLISFSQIIH 246 (247)
Q Consensus 174 ---~~~~yNsa~li~p~G~il~~Y~K~hL~~~~vP~~~~~~E~~~f~~G~~-~~vf~~~~grig~~~~lICyD~~~~ 246 (247)
++++||++++|+|+|++++.|+|+||++++ .|.|..+|.+|++ ..+|+++++|+|+ +||||...|
T Consensus 172 ~~~~~~~yNsa~vi~p~G~i~~~YrK~hL~~~g-----~f~E~~~f~~G~~~~~vf~~~~~riG~---~ICyD~~fP 240 (405)
T 2vhh_A 172 MEHGETIWNTAVVISNSGRYLGKHRKNHIPRVG-----DFNESTYYMEGNTGHPVFETEFGKLAV---NICYGRHHP 240 (405)
T ss_dssp TTTTTEEEEEEEEECTTSCEEEEEECSCCCC---------------CCCCSCCCEEEETTEEEEE---CCGGGGGCH
T ss_pred cCCCCcEEEEEEEECCCCeEEEEEecccCCCCC-----CcCcccceeCCCCCCeeEEECCEEEEE---EEeccccCh
Confidence 578999999999999999999999996642 5679999999985 8999999999988 999998654
No 5
>3ivz_A Nitrilase; alpha-beta sandwich, hydrolase; 1.57A {Pyrococcus abyssi} SCOP: d.160.1.2 PDB: 3iw3_A 3ki8_A 3klc_A 1j31_A
Probab=99.97 E-value=8.1e-30 Score=223.08 Aligned_cols=146 Identities=34% Similarity=0.572 Sum_probs=129.8
Q ss_pred eEEEEEecccc-cCHHHHHHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCCCcc---hhhhhhccCCCChHHHHHHHHHHH
Q 025863 83 FKVGLCQLSVT-ADKERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFP---VYAEDIDAGGDASPSTAMLSEVAR 158 (247)
Q Consensus 83 ~kValvQ~~i~-~d~~~n~~~i~~~i~~Aa~~gadLVVfPE~~l~g~~~~~~~---~~~e~~~~~~~~~~~~~~l~~~Ar 158 (247)
||||++|+++. +|.++|++++.+++++|++.|+|||||||++++||...+.. ..++.. .+++.++.++++|+
T Consensus 2 ~rva~~Q~~~~~~d~~~N~~~~~~~i~~A~~~gadlvvfPE~~~~gy~~~~~~~~~~~a~~~----~~~~~~~~l~~~a~ 77 (262)
T 3ivz_A 2 VKVAYVQMNPQILEPDKNYSKAEKLIKEASKQGAQLVVLPELFDTGYNFETREEVFEIAQKI----PEGETTTFLMDVAR 77 (262)
T ss_dssp CEEEEEECCCCTTCHHHHHHHHHHHHHHHHHTTCSEEECCTTTTTCSCCSCHHHHHHHCBCT----TTSHHHHHHHHHHH
T ss_pred eEEEEEeccCCCCCHHHHHHHHHHHHHHHHHCCCCEEEeCCCcccCCCCCCHHHHHHhcCcc----CCCHHHHHHHHHHH
Confidence 89999999987 99999999999999999999999999999999999876532 222221 13589999999999
Q ss_pred hcCcEEEEeeeeeecCCeeEEEEEEEccCCcEEEEEeccccCCCCCCCCcccccccccccCC-CCeEEEeCCeEEecccc
Q 025863 159 LLKITIVGGSIPERSGDRLYNTCCVFGSDGKLIAKHRKIHLFDIDIPGKITFIESKSLTAGE-TPTIVDTGLMFLLFYNG 237 (247)
Q Consensus 159 ~~~i~Iv~Gs~~e~~~~~~yNsa~li~p~G~il~~Y~K~hL~~~~vP~~~~~~E~~~f~~G~-~~~vf~~~~grig~~~~ 237 (247)
++++++++| +++++++++||++++++|+| ++..|+|+||+ +.|..+|++|+ +..+|+++++|+|+
T Consensus 78 ~~~~~iv~G-~~~~~~~~~yNs~~~i~~~G-~~~~y~K~hL~---------~~E~~~f~~G~~~~~v~~~~~~~ig~--- 143 (262)
T 3ivz_A 78 DTGVYIVAG-TAEKDGDVLYNSAVVVGPRG-FIGKYRKIHLF---------YREKFFFEPGDLGFRVFDLGFMKVGV--- 143 (262)
T ss_dssp HHCCEEEEE-EEEEETTEEEEEEEEEETTE-EEEEEECSSCC---------GGGGGTCBCCCSCSCEEECSSCEEEE---
T ss_pred HcCcEEEEe-EEEeeCCcEEEEEEEEcCCe-eEEEEeecccC---------CchhceEeCCCCCceEEEECCEEEEE---
Confidence 999999999 78888999999999999999 99999999993 47999999999 79999999999988
Q ss_pred ceecccccc
Q 025863 238 LISFSQIIH 246 (247)
Q Consensus 238 lICyD~~~~ 246 (247)
+||||...|
T Consensus 144 ~IC~D~~fp 152 (262)
T 3ivz_A 144 MICFDWFFP 152 (262)
T ss_dssp CCGGGGGSH
T ss_pred EEecCCCch
Confidence 999997643
No 6
>2e11_A Hydrolase; dimethylarsenic inhibi complex, cacodylate; 1.73A {Xanthomonas campestris PV}
Probab=99.97 E-value=6.4e-30 Score=223.85 Aligned_cols=148 Identities=23% Similarity=0.245 Sum_probs=128.6
Q ss_pred CCceEEEEEecccc-cCHHHHHHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCCCcchhhhhhccCCCChHHHHHHHHHHH
Q 025863 80 VAKFKVGLCQLSVT-ADKERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVAR 158 (247)
Q Consensus 80 ~~~~kValvQ~~i~-~d~~~n~~~i~~~i~~Aa~~gadLVVfPE~~l~g~~~~~~~~~~e~~~~~~~~~~~~~~l~~~Ar 158 (247)
|++||||++|+++. +|.++|++++.+++++| +.|+|||||||++++||... ....++.. .++..+.++++|+
T Consensus 1 M~~~kva~~Q~~~~~~d~~~n~~~~~~~i~~a-~~gadlvv~PE~~~~gy~~~-~~~~a~~~-----~~~~~~~l~~~a~ 73 (266)
T 2e11_A 1 MHDLRISLVQGSTRWHDPAGNRDYYGALLEPL-AGQSDLVILPETFTSGFSNE-AIDKAEDM-----DGPTVAWIRTQAA 73 (266)
T ss_dssp CCCEEEEEEECCCCTTCHHHHHHHHHHHHGGG-TTTCSEEECCTTTTTCSCSG-GGGGCEET-----TSHHHHHHHHHHH
T ss_pred CCccEEEEEeCCCCcCCHHHHHHHHHHHHHHh-cCCCCEEECCCCccccCChh-HHHhhccC-----CCHHHHHHHHHHH
Confidence 45699999999986 89999999999999999 88999999999999999532 22233332 3589999999999
Q ss_pred hcCcEEEEeeeeeecCCeeEEEEEEEccCCcEEEEEeccccCCCCCCCCcccccccccccCCCCeEEEeCCeEEeccccc
Q 025863 159 LLKITIVGGSIPERSGDRLYNTCCVFGSDGKLIAKHRKIHLFDIDIPGKITFIESKSLTAGETPTIVDTGLMFLLFYNGL 238 (247)
Q Consensus 159 ~~~i~Iv~Gs~~e~~~~~~yNsa~li~p~G~il~~Y~K~hL~~~~vP~~~~~~E~~~f~~G~~~~vf~~~~grig~~~~l 238 (247)
++++++++| ..+++++++||++++++|+|+++ .|+|+||+++ +.|..+|.+|++..+|+++++|+|+ +
T Consensus 74 ~~~~~iv~G-~~~~~~~~~yNs~~~i~~~G~i~-~y~K~hL~~~-------~~E~~~f~~G~~~~v~~~~~~~ig~---~ 141 (266)
T 2e11_A 74 RLGAAITGS-VQLRTEHGVFNRLLWATPDGALQ-YYDKRHLFRF-------GNEHLRYAAGRERLCVEWKGWRINP---Q 141 (266)
T ss_dssp HHTSEEEEE-EEEEETTEEEEEEEEECTTSCEE-EEECSSCCGG-------GTTTTTSBCCCSCCCEEETTEEEEE---E
T ss_pred HhCCEEEEe-eeEccCCcEEEEEEEECCCCCEE-EEeeeccCCC-------cChhhhccCCCCceEEEECCEEEEE---E
Confidence 999999999 56667889999999999999999 9999999763 3689999999999999999999988 9
Q ss_pred eecccccc
Q 025863 239 ISFSQIIH 246 (247)
Q Consensus 239 ICyD~~~~ 246 (247)
||||...|
T Consensus 142 ICyD~~fp 149 (266)
T 2e11_A 142 VCYDLRFP 149 (266)
T ss_dssp EGGGGGCT
T ss_pred EEeccCCH
Confidence 99998754
No 7
>3hkx_A Amidase; alpha-beta-BETA-alpha:alpha-beta-BETA-alpha dimeric sandwich hydrolase; 1.66A {Nesterenkonia SP}
Probab=99.97 E-value=1.3e-30 Score=231.15 Aligned_cols=154 Identities=21% Similarity=0.318 Sum_probs=132.7
Q ss_pred CCCCCCceEEEEEecccc-cCHHHHHHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCCCcc-hhhhhhccCCCChHHHHHH
Q 025863 76 PTPPVAKFKVGLCQLSVT-ADKERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFP-VYAEDIDAGGDASPSTAML 153 (247)
Q Consensus 76 ~~~~~~~~kValvQ~~i~-~d~~~n~~~i~~~i~~Aa~~gadLVVfPE~~l~g~~~~~~~-~~~e~~~~~~~~~~~~~~l 153 (247)
+.....+||||++|+++. +|.++|++++.+++++|++.|+|||||||++++||...++. .+++..+ ++.++.+
T Consensus 14 ~~~~~~~~rva~~Q~~~~~~d~~~N~~~~~~~i~~A~~~gadlvvfPE~~l~gy~~~d~~~~~a~~~~-----~~~~~~l 88 (283)
T 3hkx_A 14 LVIRGSHMRIALMQHTARPLDPQHNLDLIDDAAARASEQGAQLLLTPELFGFGYVPSQICAQVSAEQV-----DAARSRL 88 (283)
T ss_dssp SCCTTEEEEEEEEEBCCCTTCHHHHHHHHHHHHHHHHHTTCSEEECCTTGGGCSCHHHHHHHCCHHHH-----HHHHHHH
T ss_pred ceecCCccEEEEEeCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEcCCCcccCCChHHHHHHhccccC-----CHHHHHH
Confidence 445566799999999987 69999999999999999999999999999999999765322 3344332 5899999
Q ss_pred HHHHHhcCcEEEEeeeeeecC-CeeEEEEEEEccCCcEEEEEeccccCCCCCCCCcccccccccccCCC-CeEEEeCCeE
Q 025863 154 SEVARLLKITIVGGSIPERSG-DRLYNTCCVFGSDGKLIAKHRKIHLFDIDIPGKITFIESKSLTAGET-PTIVDTGLMF 231 (247)
Q Consensus 154 ~~~Ar~~~i~Iv~Gs~~e~~~-~~~yNsa~li~p~G~il~~Y~K~hL~~~~vP~~~~~~E~~~f~~G~~-~~vf~~~~gr 231 (247)
+++|+++++++++| .+++++ +++||++++|+|+|++++.|+|+|||++ .|..+|++|++ ..+|+++++|
T Consensus 89 ~~~a~~~~i~iv~G-~~~~~~~~~~yNs~~~i~~~G~i~~~y~K~hL~~~--------~E~~~f~~G~~~~~v~~~~~~~ 159 (283)
T 3hkx_A 89 RGIARDRGIALVWS-LPGPEGPEQRGITAELADEHGEVLASYQKVQLYGP--------EEKAAFVPGEQPPPVLSWGGRQ 159 (283)
T ss_dssp HHHHHHTTSEEEEC-CBCSSCTTTCCBEEEEECTTSCEEEEEECSSCCHH--------HHHHHSCCCCSCCCEEEETTEE
T ss_pred HHHHHHhCCEEEEE-EEEEcCCCCEEEEEEEEcCCCcEEEEEccccCCCc--------CchhhccCCCCCceEEEECCEE
Confidence 99999999999999 567665 7899999999999999999999999652 58899999998 6899999999
Q ss_pred Eeccccceecccccc
Q 025863 232 LLFYNGLISFSQIIH 246 (247)
Q Consensus 232 ig~~~~lICyD~~~~ 246 (247)
+|+ +||||...|
T Consensus 160 ig~---~IC~D~~fp 171 (283)
T 3hkx_A 160 LSL---LVCYDVEFP 171 (283)
T ss_dssp EEE---CCGGGGGSH
T ss_pred EEE---EEecCcCCH
Confidence 988 999998643
No 8
>1ems_A Nitfhit, NIT-fragIle histidine triad fusion protein; WORM, nitrilase, nucleotide-binding protein, cancer; 2.80A {Caenorhabditis elegans} SCOP: d.13.1.1 d.160.1.1
Probab=99.96 E-value=2.7e-29 Score=234.95 Aligned_cols=159 Identities=28% Similarity=0.388 Sum_probs=136.2
Q ss_pred CCceEEEEEecccccCHHHHHHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCCC-cchhhhhhccCCCChHHHHHHHHHHH
Q 025863 80 VAKFKVGLCQLSVTADKERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDS-FPVYAEDIDAGGDASPSTAMLSEVAR 158 (247)
Q Consensus 80 ~~~~kValvQ~~i~~d~~~n~~~i~~~i~~Aa~~gadLVVfPE~~l~g~~~~~-~~~~~e~~~~~~~~~~~~~~l~~~Ar 158 (247)
|.++|||++|+++..|.++|++++.+++++|++.|+|||||||+++++|...+ ....++..+ ++..+.|+++|+
T Consensus 12 ~~~~kVa~vQ~~~~~d~~~nl~~~~~li~~A~~~gadlvv~PE~~~~~~~~~~~~~~~a~~~~-----~~~~~~l~~~A~ 86 (440)
T 1ems_A 12 TGRHFIAVCQMTSDNDLEKNFQAAKNMIERAGEKKCEMVFLPECFDFIGLNKNEQIDLAMATD-----CEYMEKYRELAR 86 (440)
T ss_dssp CSEEEEEEECBCCCSCHHHHHHHHHHHHHHHHHTTCSEEEECTTCSCCCSSHHHHHHHHHHHH-----HHHHHHHHHHHH
T ss_pred cCCceEEEEecCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCcccccCcchhHHHHhhccCC-----CHHHHHHHHHHH
Confidence 35799999999998999999999999999999999999999999998875421 112233332 588999999999
Q ss_pred hcCcEEEEeeee--ee-cCCeeEEEEEEEccCCcEEEEEeccccCCCCCCCCcccccccccccCCCCeE-EEeCCeEEec
Q 025863 159 LLKITIVGGSIP--ER-SGDRLYNTCCVFGSDGKLIAKHRKIHLFDIDIPGKITFIESKSLTAGETPTI-VDTGLMFLLF 234 (247)
Q Consensus 159 ~~~i~Iv~Gs~~--e~-~~~~~yNsa~li~p~G~il~~Y~K~hL~~~~vP~~~~~~E~~~f~~G~~~~v-f~~~~grig~ 234 (247)
++++++++|+.. ++ +++++||++++|+++|++++.|+|+||++.++|++..|.|..+|++|++..+ |+++++|+|+
T Consensus 87 ~~~i~iv~G~~~~~e~~~~~~~yNs~~~i~~~G~i~~~yrK~hL~~~~~P~~~~~~E~~~f~~G~~~~~~~~~~~~~iG~ 166 (440)
T 1ems_A 87 KHNIWLSLGGLHHKDPSDAAHPWNTHLIIDSDGVTRAEYNKLHLFDLEIPGKVRLMESEFSKAGTEMIPPVDTPIGRLGL 166 (440)
T ss_dssp HTTCEEEEEEEEEEETTEEEEEEEEEEEECTTSCEEEEEECCCCCEEEETTTEEEEGGGTCCCCCSCCCCEEETTEEECC
T ss_pred HcCeEEEeccccccccCCCCcEEEEEEEECCCCcEEEEEeeeeecCccCCCCCcccccccccCCCCCceeEECCCeeEEE
Confidence 999999999665 54 3578999999999999999999999999866787778899999999999887 9999999977
Q ss_pred cccceecccccc
Q 025863 235 YNGLISFSQIIH 246 (247)
Q Consensus 235 ~~~lICyD~~~~ 246 (247)
+||||...|
T Consensus 167 ---~ICyD~~fp 175 (440)
T 1ems_A 167 ---SICYDVRFP 175 (440)
T ss_dssp ---CCGGGGGCH
T ss_pred ---EEeccccCh
Confidence 999998754
No 9
>1uf5_A N-carbamyl-D-amino acid amidohydrolase; HET: CDT; 1.60A {Agrobacterium SP} SCOP: d.160.1.2 PDB: 1uf4_A* 1uf7_A* 1uf8_A* 1erz_A 1fo6_A 2ggl_A 2ggk_A
Probab=99.95 E-value=6.5e-28 Score=214.42 Aligned_cols=159 Identities=21% Similarity=0.237 Sum_probs=127.8
Q ss_pred ceEEEEEecccc---cCHHHHHHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCCCcchh----hhhhccCCCChHHHHHHH
Q 025863 82 KFKVGLCQLSVT---ADKERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFPVY----AEDIDAGGDASPSTAMLS 154 (247)
Q Consensus 82 ~~kValvQ~~i~---~d~~~n~~~i~~~i~~Aa~~gadLVVfPE~~l~g~~~~~~~~~----~e~~~~~~~~~~~~~~l~ 154 (247)
+||||++|+++. +|.++|++++.+++++|++.|+|||||||++++||...++... ....+ ....++.++.++
T Consensus 3 ~~~va~~Q~~~~~~~~d~~~n~~~~~~~i~~a~~~gadlvv~PE~~~~gy~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~ 81 (303)
T 1uf5_A 3 QMILAVGQQGPIARAETREQVVVRLLDMLTKAASRGANFIVFPELALTTFFPRWHFTDEAELDSFYE-TEMPGPVVRPLF 81 (303)
T ss_dssp EEEEEEEEBCCCCTTCCHHHHHHHHHHHHHHHHHTTCSEEECCTTTTSCCGGGSCCCCHHHHHTTSB-SSSSCTTTHHHH
T ss_pred cEEEEEEEecCcccccCHHHHHHHHHHHHHHHHhcCCCEEEeccccccCCCccccccchhhhHHHHh-hcCCCHHHHHHH
Confidence 599999999976 6999999999999999999999999999999999964321000 01111 001357889999
Q ss_pred HHHHhcCcEEEEeeeeeec-CC---eeEEEEEEEccCCcEEEEEeccccCCCC--CCCCccc--ccccccccCC-CCeEE
Q 025863 155 EVARLLKITIVGGSIPERS-GD---RLYNTCCVFGSDGKLIAKHRKIHLFDID--IPGKITF--IESKSLTAGE-TPTIV 225 (247)
Q Consensus 155 ~~Ar~~~i~Iv~Gs~~e~~-~~---~~yNsa~li~p~G~il~~Y~K~hL~~~~--vP~~~~~--~E~~~f~~G~-~~~vf 225 (247)
++|+++++++++| +++++ ++ ++||++++++++|+++..|+|+||++++ +|.. .| .|..+|++|+ +..+|
T Consensus 82 ~~a~~~~~~iv~G-~~~~~~~~~~~~~yNs~~~i~~~G~i~~~y~K~hL~~~~e~~p~~-~~~~~E~~~f~~G~~~~~v~ 159 (303)
T 1uf5_A 82 EKAAELGIGFNLG-YAELVVEGGVKRRFNTSILVDKSGKIVGKYRKIHLPGHKEYEAYR-PFQHLEKRYFEPGDLGFPVY 159 (303)
T ss_dssp HHHHHHTCEEEEE-EEEEEEETTEEEEEEEEEEECTTSCEEEEEECCCCCSCSSCCTTC-SSCCCHHHHCCCCSSCSCEE
T ss_pred HHHHHhCeEEEEe-eeEecCCCCCcceeeEEEEECCCCCEeeeEeeeecCCcccccccc-cccccchhhccCCCCCCceE
Confidence 9999999999999 55654 45 7999999999999999999999996332 3321 23 6888999999 88999
Q ss_pred EeCCeEEeccccceecccccc
Q 025863 226 DTGLMFLLFYNGLISFSQIIH 246 (247)
Q Consensus 226 ~~~~grig~~~~lICyD~~~~ 246 (247)
+++++|+|+ +||||...+
T Consensus 160 ~~~~~~ig~---~ICyD~~fp 177 (303)
T 1uf5_A 160 DVDAAKMGM---FIANDRRWP 177 (303)
T ss_dssp EETTEEEEE---CCGGGGGCH
T ss_pred ecCCceEEE---EEecCccCH
Confidence 999999988 999998653
No 10
>3ilv_A Glutamine-dependent NAD(+) synthetase; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.79A {Cytophaga hutchinsonii atcc 33406}
Probab=99.95 E-value=3.3e-27 Score=230.51 Aligned_cols=151 Identities=21% Similarity=0.258 Sum_probs=129.4
Q ss_pred CCceEEEEEecccc-cCHHHHHHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCCCcchhhhhhccCCCChHHHHHHHHHHH
Q 025863 80 VAKFKVGLCQLSVT-ADKERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVAR 158 (247)
Q Consensus 80 ~~~~kValvQ~~i~-~d~~~n~~~i~~~i~~Aa~~gadLVVfPE~~l~g~~~~~~~~~~e~~~~~~~~~~~~~~l~~~Ar 158 (247)
|+.||||++|+++. +|.+.|++++.+++++|+++|+|||||||++++||...++.. .+... ++..+.++++|+
T Consensus 3 M~~~rVA~~Q~~~~~~d~~~N~~~i~~~i~~A~~~gadLvVfPEl~ltGY~~~dl~~-~~~~~-----~~~~~~l~~la~ 76 (634)
T 3ilv_A 3 LSTIRIGGAAVNQTPIDWENNVKNILDAIEEAKNANVEILCLPELCITGYGCEDLFL-TDWVA-----ETAIEYCFEIAA 76 (634)
T ss_dssp -CEEEEEEEEECCCTTCHHHHHHHHHHHHHHHHHTTCSEEECCTTTTTCSCCGGGGG-SHHHH-----HHHHHHHHHHHT
T ss_pred CCCeEEEEEeCCCCCCCHHHHHHHHHHHHHHHHHCCCcEEEcCCCccccCChHHHhh-Chhhh-----HHHHHHHHHHHH
Confidence 56899999999987 799999999999999999999999999999999998876432 22222 477889999999
Q ss_pred hc-CcEEEEeeeeeecCCeeEEEEEEEccCCcEEEEEeccccCCCCCCCCcccccccccccCCCC---------------
Q 025863 159 LL-KITIVGGSIPERSGDRLYNTCCVFGSDGKLIAKHRKIHLFDIDIPGKITFIESKSLTAGETP--------------- 222 (247)
Q Consensus 159 ~~-~i~Iv~Gs~~e~~~~~~yNsa~li~p~G~il~~Y~K~hL~~~~vP~~~~~~E~~~f~~G~~~--------------- 222 (247)
++ ++++++| ++++.++++||+++++ ++|++++.|+|+||+++ ..|.|..+|++|+..
T Consensus 77 ~~~~i~ivvG-~p~~~~~~lyNsa~vi-~~G~il~~y~K~hL~~~-----~~f~E~r~f~pG~~~~~~~~~~~g~~~p~g 149 (634)
T 3ilv_A 77 SCTDITVSLG-LPMRIAGITYNCVCLV-ENGIVKGFSAKQFLANE-----GVHYETRWFTAWPRNHTTTFLYNDVKYPFG 149 (634)
T ss_dssp TCTTSEEEEE-EEEEETTEEEEEEEEE-ETTEEEEEEECSSCCCS-----TTCCGGGTCCCCCTTCEEEEEETTEEEEEE
T ss_pred hCCCCEEEEe-eeEeeCCCccEEEEEE-ECCeEEEEEcCEeCCCC-----CCcChhhhcCCCCccccceecccCcccccC
Confidence 96 9999999 7888899999999999 89999999999999665 367899999999875
Q ss_pred -eEEEeCCeEEeccccceecccccc
Q 025863 223 -TIVDTGLMFLLFYNGLISFSQIIH 246 (247)
Q Consensus 223 -~vf~~~~grig~~~~lICyD~~~~ 246 (247)
.+|+++++++|+ .||||.+-|
T Consensus 150 ~~vf~~~g~~iG~---~IC~D~~fP 171 (634)
T 3ilv_A 150 DVLYNVKDARIGF---EICEDAWRT 171 (634)
T ss_dssp SCCEEETTEEEEE---CCTTC----
T ss_pred CeEEEECCEEEEE---EEeccccCC
Confidence 689999999988 999998754
No 11
>4f4h_A Glutamine dependent NAD+ synthetase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, ligase; 1.75A {Burkholderia thailandensis}
Probab=99.94 E-value=3.4e-26 Score=220.66 Aligned_cols=150 Identities=24% Similarity=0.320 Sum_probs=122.1
Q ss_pred CceEEEEEecccc-cCHHHHHHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCCCcchhhhhhccCCCChHHHHHHHHHH--
Q 025863 81 AKFKVGLCQLSVT-ADKERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVA-- 157 (247)
Q Consensus 81 ~~~kValvQ~~i~-~d~~~n~~~i~~~i~~Aa~~gadLVVfPE~~l~g~~~~~~~~~~e~~~~~~~~~~~~~~l~~~A-- 157 (247)
.+||||++|+++. +|++.|++++++++++|+++|||||||||++++||.+.++........ ...+.+.+++
T Consensus 5 MkmKIAlaQln~~vGD~~~N~~~i~~~i~~Aa~~GAdLvvfPEL~ltGY~~~Dl~~~~~~~~------~~~~~l~~la~~ 78 (565)
T 4f4h_A 5 MKTRIALAQLNVTVGDFAGNVAKIVAAAQAAHDAGAHFLIAPELALSGYPPEDLLLRPAFYA------ASDAALAELAAQ 78 (565)
T ss_dssp -CEEEEEEECCCCTTCHHHHHHHHHHHHHHHHHTTCSEEECCTTTTTCSCCGGGGGCHHHHH------HHHHHHHHHHHH
T ss_pred cceEEEEEECCCCcccHHHHHHHHHHHHHHHHHCCCcEEECCCCcccCCChHHhhhCHHHHH------HHHHHHHHHHHH
Confidence 3699999999987 899999999999999999999999999999999999877533222221 2223333433
Q ss_pred --HhcCcEEEEeeeeeecC----------------CeeEEEEEEEccCCcEEEEEeccccCCCCCCCCcccccccccccC
Q 025863 158 --RLLKITIVGGSIPERSG----------------DRLYNTCCVFGSDGKLIAKHRKIHLFDIDIPGKITFIESKSLTAG 219 (247)
Q Consensus 158 --r~~~i~Iv~Gs~~e~~~----------------~~~yNsa~li~p~G~il~~Y~K~hL~~~~vP~~~~~~E~~~f~~G 219 (247)
+..++++++| .+.+.. +++||+++++. +|++++.|+|+|| |++..|.|+++|.+|
T Consensus 79 ~~~~~~i~ivvG-~p~~~~~~~~~~~~~~~~~~~~~~lyNsa~vi~-~G~i~~~y~K~hL-----p~~~~f~E~r~f~~G 151 (565)
T 4f4h_A 79 LKPFAGLAVLVG-HPLRAPSADGNANRAIERGVPPVDTYNAASLIV-GGEVAGTYRKQDL-----PNTEVFDEKRYFATD 151 (565)
T ss_dssp HTTSTTCEEEEE-EEEECC-----CCCCCCTTSCCCSEEEEEEEEE-TTEEEEEEECCSC-----CCSTTCCGGGTCCCC
T ss_pred hhhcCCcEEEEe-eeeeecccccccccceecccCCCceEEEEEEEE-CCEEEEEEeeeec-----CCCcccceeccccCC
Confidence 3358999999 565432 35999999996 6999999999999 445678999999999
Q ss_pred CCCeEEEeCCeEEeccccceecccccc
Q 025863 220 ETPTIVDTGLMFLLFYNGLISFSQIIH 246 (247)
Q Consensus 220 ~~~~vf~~~~grig~~~~lICyD~~~~ 246 (247)
+...+|+++++++|+ .||||.+-|
T Consensus 152 ~~~~v~~~~g~~iGv---~IC~Dlwfp 175 (565)
T 4f4h_A 152 AAPYVFELNGVKFGV---VICEDVWHA 175 (565)
T ss_dssp CCCCEEEETTEEEEE---CCGGGGGSS
T ss_pred CcceeEEecCcEEEE---EEeehhccc
Confidence 999999999999988 999998643
No 12
>3n05_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, protein structure initiative, P nysgrc; 2.35A {Streptomyces avermitilis}
Probab=99.94 E-value=1.7e-26 Score=223.74 Aligned_cols=149 Identities=23% Similarity=0.294 Sum_probs=129.7
Q ss_pred CceEEEEEecccc-cCHHHHHHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCCCcchhhhhhccCCCChHHHHHHHHHHHh
Q 025863 81 AKFKVGLCQLSVT-ADKERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARL 159 (247)
Q Consensus 81 ~~~kValvQ~~i~-~d~~~n~~~i~~~i~~Aa~~gadLVVfPE~~l~g~~~~~~~~~~e~~~~~~~~~~~~~~l~~~Ar~ 159 (247)
.+||||++|+++. +|.+.|++++.+++++|+++|+|||||||++++||...++....+.. ++..+.++++|++
T Consensus 3 ~~~rvA~~Q~~~~~~d~~~N~~~i~~~i~~A~~~gadLvvfPEl~ltGy~~~dl~~~~~~~------~~~~~~l~~la~~ 76 (590)
T 3n05_A 3 LQLRLALNQIDSTVGDIAGNAEAILRWTRHSAEQGAHLVAFPEMALTGYPVEDLALRSSFV------EASRTALRELAAR 76 (590)
T ss_dssp EEEEEEEEECCCCTTCHHHHHHHHHHHHHHHHTTTCSEEECCTTTTTCSCCGGGGGCHHHH------HHHHHHHHHHHHH
T ss_pred CccEEEEEeCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEcCcccccCCChHHHhhCHHHH------HHHHHHHHHHHHh
Confidence 4799999999987 89999999999999999999999999999999999887654433332 3778889999998
Q ss_pred c--C----cEEEEeeeeeec-C---------CeeEEEEEEEccCCcEEEEEeccccCCCCCCCCcccccccccccCCCCe
Q 025863 160 L--K----ITIVGGSIPERS-G---------DRLYNTCCVFGSDGKLIAKHRKIHLFDIDIPGKITFIESKSLTAGETPT 223 (247)
Q Consensus 160 ~--~----i~Iv~Gs~~e~~-~---------~~~yNsa~li~p~G~il~~Y~K~hL~~~~vP~~~~~~E~~~f~~G~~~~ 223 (247)
+ + +++++|+ +++. + +++||++++|+ +|++++.|+|+||++++ .|.|..+|++|++..
T Consensus 77 ~~~~~~~~i~ivvG~-~~~~~~~~~~~~~~~~~lyNsa~vi~-~G~i~~~y~K~~L~~~~-----~f~E~r~f~~G~~~~ 149 (590)
T 3n05_A 77 LAEEGFGELPVLVGY-LDRSESAQPKYGQPAGAPRNAAAVLH-RGRVALTFAKHHLPNYG-----VFDEFRYFVPGDTMP 149 (590)
T ss_dssp HHHTTCTTSCEEEEE-EEECSSCBTTTTBCTTCEEEEEEEEE-TTEEEEEEECCCCCSSS-----SCCHHHHCCCCCEEE
T ss_pred hhhccCCceEEEEee-EEEEcCcccccccccCCeeEEEEEEe-CCEEEEEEeCccCCCCC-----ccCccccccCCCcce
Confidence 8 6 9999994 5554 2 37999999998 99999999999996653 578999999999999
Q ss_pred EEEeCCeEEeccccceeccccc
Q 025863 224 IVDTGLMFLLFYNGLISFSQII 245 (247)
Q Consensus 224 vf~~~~grig~~~~lICyD~~~ 245 (247)
+|+++++|+|+ +||||.+.
T Consensus 150 v~~~~g~~iG~---~IC~D~~f 168 (590)
T 3n05_A 150 IVRLHGVDIAL---AICEDLWQ 168 (590)
T ss_dssp EEEETTEEEEE---EEGGGGGS
T ss_pred EEEECCEEEEE---Eeehhhcc
Confidence 99999999988 99999876
No 13
>3sdb_A Glutamine-dependent NAD(+) synthetase; glutamine-amidotransferase, glutaminase, glutamine-dependent synthetase, ligase; 2.00A {Mycobacterium tuberculosis} PDB: 3seq_A* 3sez_A* 3szg_A* 3dla_A* 3syt_A*
Probab=99.94 E-value=3.3e-26 Score=224.86 Aligned_cols=153 Identities=24% Similarity=0.280 Sum_probs=131.4
Q ss_pred CceEEEEEecccc-cCHHHHHHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCCCcchhhhhhccCCCChHHHHHHHHHHHh
Q 025863 81 AKFKVGLCQLSVT-ADKERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARL 159 (247)
Q Consensus 81 ~~~kValvQ~~i~-~d~~~n~~~i~~~i~~Aa~~gadLVVfPE~~l~g~~~~~~~~~~e~~~~~~~~~~~~~~l~~~Ar~ 159 (247)
..||||++|+++. +|++.|++++.+++++|++.|+|||||||++++||...++....+.++. ..+.++.|.++|++
T Consensus 11 g~~rVAl~Q~~~~~~D~~~N~~~i~~~i~~A~~~gadLvVfPEl~ltGY~~~dl~~~~~~~~~---~~~~l~~l~~~a~~ 87 (680)
T 3sdb_A 11 GFVRVAACTHHTTIGDPAANAASVLDMARACHDDGAALAVFPELTLSGYSIEDVLLQDSLLDA---VEDALLDLVTESAD 87 (680)
T ss_dssp TEEEEEEEECCCCTTCHHHHHHHHHHHHHHHHHTTCSEEECCTTTTTCGGGGGGGGCHHHHHH---HHHHHHHHHHHHTT
T ss_pred CCeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEcCCCcccCCChHHHhhCHHHHHh---hHHHHHHHHHHhhc
Confidence 4699999999987 9999999999999999999999999999999999987664333222221 24788999999999
Q ss_pred cCcEEEEeeeeeecCCeeEEEEEEEccCCcEEEEEeccccCCCCCCCCcccccccccccCCCCe----------------
Q 025863 160 LKITIVGGSIPERSGDRLYNTCCVFGSDGKLIAKHRKIHLFDIDIPGKITFIESKSLTAGETPT---------------- 223 (247)
Q Consensus 160 ~~i~Iv~Gs~~e~~~~~~yNsa~li~p~G~il~~Y~K~hL~~~~vP~~~~~~E~~~f~~G~~~~---------------- 223 (247)
+++++++| .+++.++++||++++++ +|++++.|+|+||+++ ..|.|.++|++|++..
T Consensus 88 ~~i~ivvG-~p~~~~~~lyNsa~vi~-~G~il~~y~K~hL~~~-----~~f~E~r~F~~G~~~~~~i~~~g~~vpfg~~~ 160 (680)
T 3sdb_A 88 LLPVLVVG-APLRHRHRIYNTAVVIH-RGAVLGVVPKSYLPTY-----REFYERRQMAPGDGERGTIRIGGADVAFGTDL 160 (680)
T ss_dssp CSSEEEEE-EEEEETTEEEEEEEEEE-TTEEEEEEECSCCCEE-----TTEEGGGTEECCTTCCSEEEETTEEEEBSSCE
T ss_pred CCcEEEEe-ceEEeCCCceEEEEEEe-CCCEEEEEeeecCCCC-----CccChhhhcCCCCCCCceeeecCcccccCCce
Confidence 99999999 68888899999999998 8999999999999765 3678999999998752
Q ss_pred EE---EeCCeEEeccccceecccccc
Q 025863 224 IV---DTGLMFLLFYNGLISFSQIIH 246 (247)
Q Consensus 224 vf---~~~~grig~~~~lICyD~~~~ 246 (247)
+| +++++++|+ .||||.+-|
T Consensus 161 vf~~~~~~g~riGv---~IC~Dl~fP 183 (680)
T 3sdb_A 161 LFAASDLPGFVLHV---EIAEDMFVP 183 (680)
T ss_dssp EEEETTCTTCEEEE---EEGGGGGSS
T ss_pred eEeeeccCCeEEEE---EEecccccc
Confidence 46 678999988 999998765
No 14
>2dyu_A Formamidase; AMIF, CEK, catalytic triad, helicobacter pylori aliphatic amidase, hydrolase; 1.75A {Helicobacter pylori} PDB: 2dyv_A 2e2l_A 2e2k_A
Probab=99.93 E-value=8.7e-26 Score=204.68 Aligned_cols=147 Identities=22% Similarity=0.303 Sum_probs=120.4
Q ss_pred CceEEEEEecccc-----cCHHHHHHHHHHHHHHHHH--CCCeEEEcCCCCCCCCCCCC--cchhhhhhccCCCChHHHH
Q 025863 81 AKFKVGLCQLSVT-----ADKERNIAHARRAIEEAAE--KGAKLILLPEIWNSPYSHDS--FPVYAEDIDAGGDASPSTA 151 (247)
Q Consensus 81 ~~~kValvQ~~i~-----~d~~~n~~~i~~~i~~Aa~--~gadLVVfPE~~l~g~~~~~--~~~~~e~~~~~~~~~~~~~ 151 (247)
.+||||++|+++. +|.++|++++.+++++|++ .++|||||||++++||..+. ..+.++.. .++.++
T Consensus 12 ~~~~Va~vQ~~i~~~~~~~d~~~nl~~~~~li~~A~~~~~gadLVVfPE~~l~G~~~~~~~~~~~a~~~-----~~~~~~ 86 (334)
T 2dyu_A 12 EGFLVAAIQFPVPIVNSRKDIDHNIESIIRTLHATKAGYPGVELIIFPEYSTQGLNTAKWLSEEFLLDV-----PGKETE 86 (334)
T ss_dssp -CEEEEEECCBCCCCCSHHHHHHHHHHHHHHHHHHHHHCTTEEEEECCTTTTTCCCTTTTTSGGGCBCS-----SSHHHH
T ss_pred CccEEEEEecCCccCCchhhHHHHHHHHHHHHHHHHhcCCCCcEEEcCCCccccCCCChhHHHHhhccC-----CCHHHH
Confidence 4699999999852 6899999999999999987 79999999999999975433 22333332 358999
Q ss_pred HHHHHHHhcCcEEEEeeeeeec-CCe--eEEEEEEEccCCcEEEEEeccccCCCCCCCCcccccccccccCCCCe-EEEe
Q 025863 152 MLSEVARLLKITIVGGSIPERS-GDR--LYNTCCVFGSDGKLIAKHRKIHLFDIDIPGKITFIESKSLTAGETPT-IVDT 227 (247)
Q Consensus 152 ~l~~~Ar~~~i~Iv~Gs~~e~~-~~~--~yNsa~li~p~G~il~~Y~K~hL~~~~vP~~~~~~E~~~f~~G~~~~-vf~~ 227 (247)
.|+++|+++++++++| +++++ +++ +||++++|+|+|+++..|+|+|||. |...|.+|++.. +|++
T Consensus 87 ~l~~~a~~~~i~iv~G-~~e~~~~~~~~~yNsa~vi~p~G~i~~~YrK~hlf~----------e~~~f~~G~~~~~v~~~ 155 (334)
T 2dyu_A 87 LYAKACKEAKVYGVFS-IMERNPDSNKNPYNTAIIIDPQGEIILKYRKLFPWN----------PIEPWYPGDLGMPVCEG 155 (334)
T ss_dssp HHHHHHHHHTCEEEEE-EEECCSSTTSCCEEEEEEECTTSCEEEEEECSSCCT----------TTCCCCCCCSCCCCEEC
T ss_pred HHHHHHHHhCeEEEEe-eEEECCCCCceeEEEEEEECCCCCEEEEEeeccCCC----------CcccCcCCCCCceeEEC
Confidence 9999999999999999 56665 344 9999999999999999999999853 456789998754 9998
Q ss_pred C-CeEEeccccceecccccc
Q 025863 228 G-LMFLLFYNGLISFSQIIH 246 (247)
Q Consensus 228 ~-~grig~~~~lICyD~~~~ 246 (247)
+ +.|+|+ +||||...|
T Consensus 156 ~~g~~iG~---~ICyD~~fp 172 (334)
T 2dyu_A 156 PGGSKLAV---CICHDGMIP 172 (334)
T ss_dssp GGGCEEEE---EEGGGGGCH
T ss_pred CCCCEEEE---EEECCCCch
Confidence 5 559988 999998643
No 15
>2uxy_A Aliphatic amidase; nitrilase superfamily, hydrolase, acyl transfer, thiol enzymes, hydroxamic acid; HET: C3Y; 1.25A {Pseudomonas aeruginosa} PDB: 2plq_A
Probab=99.93 E-value=4.7e-26 Score=207.07 Aligned_cols=148 Identities=19% Similarity=0.191 Sum_probs=121.7
Q ss_pred CCceEEEEEeccc-----ccCHHHHHHHHHHHHHHHHH--CCCeEEEcCCCCCCCCCCCC--cchhhhhhccCCCChHHH
Q 025863 80 VAKFKVGLCQLSV-----TADKERNIAHARRAIEEAAE--KGAKLILLPEIWNSPYSHDS--FPVYAEDIDAGGDASPST 150 (247)
Q Consensus 80 ~~~~kValvQ~~i-----~~d~~~n~~~i~~~i~~Aa~--~gadLVVfPE~~l~g~~~~~--~~~~~e~~~~~~~~~~~~ 150 (247)
..+||||++|+++ .+|.++|++++.+++++|++ .++|||||||++++||.... +...++.+ .++.+
T Consensus 10 ~~~~kValvQ~~i~~~~~~~d~~~Nl~~i~~~i~~A~~~~~gadLVVfPE~~l~G~~~~~~~~~~~a~~~-----~~~~~ 84 (341)
T 2uxy_A 10 NDTVGVAVVNYKMPRLHTAAEVLDNARKIAEMIVGMKQGLPGMDLVVFPEYSLQGIMYDPAEMMETAVAI-----PGEET 84 (341)
T ss_dssp TTEEEEEEECCBCCBCCSHHHHHHHHHHHHHHHHHHHHHCTTEEEEECCTTTTTBCCCSHHHHHHHCBCS-----SSHHH
T ss_pred CCccEEEEEECCcccCCCccCHHHHHHHHHHHHHHHHhcCCCCcEEEeCCCcccccCCCHHHHHHHhccC-----CCHHH
Confidence 3579999999995 26899999999999999987 79999999999999975432 22222222 36899
Q ss_pred HHHHHHHHhcCcEEEEeeee-eecC----CeeEEEEEEEccCCcEEEEEeccccCCCCCCCCcccccccccccCCCCeEE
Q 025863 151 AMLSEVARLLKITIVGGSIP-ERSG----DRLYNTCCVFGSDGKLIAKHRKIHLFDIDIPGKITFIESKSLTAGETPTIV 225 (247)
Q Consensus 151 ~~l~~~Ar~~~i~Iv~Gs~~-e~~~----~~~yNsa~li~p~G~il~~Y~K~hL~~~~vP~~~~~~E~~~f~~G~~~~vf 225 (247)
+.|+++|+++++++++| +. ++.+ +++||++++|+|+|+++..|+|+|||. |..+|.+|++..+|
T Consensus 85 ~~l~~~a~~~~i~iv~G-~~ge~~~~~~~~~~yNsa~vi~p~G~i~~~Y~K~hlf~----------e~~~f~pG~~~~v~ 153 (341)
T 2uxy_A 85 EIFSRACRKANVWGVFS-LTGERHEEHPRKAPYNTLVLIDNNGEIVQKYRKIIPWC----------PIEGWYPGGQTYVS 153 (341)
T ss_dssp HHHHHHHHHHTCEEEEE-EEEECCTTTTSSCCEEEEEEECTTSCEEEEEECSSCCT----------TTCCCBCCCCCCCE
T ss_pred HHHHHHHHHhCcEEEEE-eeeeEcCCCCCCceEEEEEEECCCCcEEEEEEeeccCC----------CccceeCCCCceEE
Confidence 99999999999999999 55 6542 349999999999999999999999953 55679999998899
Q ss_pred EeC-CeEEeccccceecccccc
Q 025863 226 DTG-LMFLLFYNGLISFSQIIH 246 (247)
Q Consensus 226 ~~~-~grig~~~~lICyD~~~~ 246 (247)
+++ +.|+|+ +||||...|
T Consensus 154 ~~~~G~riG~---~ICyD~~fp 172 (341)
T 2uxy_A 154 EGPKGMKISL---IIXDDGNYP 172 (341)
T ss_dssp ECGGGCEEEE---EEGGGGGSH
T ss_pred ECCCCCEEEE---EEccCCcCc
Confidence 995 559988 999998653
No 16
>3hkx_A Amidase; alpha-beta-BETA-alpha:alpha-beta-BETA-alpha dimeric sandwich hydrolase; 1.66A {Nesterenkonia SP}
Probab=87.53 E-value=2.7 Score=35.97 Aligned_cols=70 Identities=23% Similarity=0.314 Sum_probs=44.0
Q ss_pred HHHHHHHCCCeEEEcCCCCCCCCCCCCcchhhhhhccCCCChHHHHHHHHHHHhcCcEEEEeeeeeecCCeeE-EEEEEE
Q 025863 106 AIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGSIPERSGDRLY-NTCCVF 184 (247)
Q Consensus 106 ~i~~Aa~~gadLVVfPE~~l~g~~~~~~~~~~e~~~~~~~~~~~~~~l~~~Ar~~~i~Iv~Gs~~e~~~~~~y-Nsa~li 184 (247)
..+..+..|+|+|+.|=.|..++. ..+...++.-|.+++++++.-...-.+++..| =.+.++
T Consensus 173 ~~r~l~~~Ga~li~~ps~~~~~~~-----------------~~~~~~~~~rA~en~~~vv~~n~~G~~~~~~~~G~S~ii 235 (283)
T 3hkx_A 173 MVRAAAARGAQLVLVPTALAGDET-----------------SVPGILLPARAVENGITLAYANHCGPEGGLVFDGGSVVV 235 (283)
T ss_dssp HHHHHHHTTCSEEEEECCCBSCCT-----------------HHHHTHHHHHHHHHTCEEEEECBEEEETTEEEECCCEEE
T ss_pred HHHHHHHCCCCEEEECCCCCCccc-----------------HHHHHHHHHHHHHhCCEEEEEccccCCCCeEEeeEEEEE
Confidence 445556789999999976543221 12334566778899999986532222333222 235889
Q ss_pred ccCCcEEE
Q 025863 185 GSDGKLIA 192 (247)
Q Consensus 185 ~p~G~il~ 192 (247)
+|+|+++.
T Consensus 236 ~p~G~vl~ 243 (283)
T 3hkx_A 236 GPAGQPLG 243 (283)
T ss_dssp CTTSCEEE
T ss_pred CCCCCEEE
Confidence 99999875
No 17
>3p8k_A Hydrolase, carbon-nitrogen family; HET: PGE; 1.70A {Staphylococcus aureus subsp}
Probab=81.90 E-value=5.9 Score=33.71 Aligned_cols=70 Identities=17% Similarity=0.269 Sum_probs=43.4
Q ss_pred HHHHHHCCCeEEEcCCCCCCCCCCCCcchhhhhhccCCCChHHHHHHHHHHHhcCcEEEEeeeeeecCC-eeEEEEEEEc
Q 025863 107 IEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGSIPERSGD-RLYNTCCVFG 185 (247)
Q Consensus 107 i~~Aa~~gadLVVfPE~~l~g~~~~~~~~~~e~~~~~~~~~~~~~~l~~~Ar~~~i~Iv~Gs~~e~~~~-~~yNsa~li~ 185 (247)
.+..+..|+|+|+.|=.|.. .. . ..+...++.-|.+++++++.-...-.+++ .++=.+.+++
T Consensus 175 ~r~~~~~Gadli~~psa~~~--------~~-~--------~~~~~~~~arA~en~~~vv~~n~~G~~~~~~~~G~S~ii~ 237 (281)
T 3p8k_A 175 LRYPARSGAKIAFYVAQWPM--------SR-L--------QHWHSLLKARAIENNMFVIGTNSTGFDGNTEYAGHSIVIN 237 (281)
T ss_dssp HHHHHHTTCCEEEEEECCBG--------GG-H--------HHHHHHHHHHHHHHTSEEEEEECEEECSSCEEECCCEEEC
T ss_pred HHHHHHCCCCEEEECCCCCC--------cc-H--------HHHHHHHHHHHHHcCCEEEEEccCcCCCCcEEeeeEEEEC
Confidence 34455689999999964421 00 1 13444567778899999986432222333 3333468899
Q ss_pred cCCcEEEE
Q 025863 186 SDGKLIAK 193 (247)
Q Consensus 186 p~G~il~~ 193 (247)
|+|+++..
T Consensus 238 p~G~vl~~ 245 (281)
T 3p8k_A 238 PNGDLVGE 245 (281)
T ss_dssp TTSCEEEE
T ss_pred CCCCEEEe
Confidence 99998764
No 18
>2uxy_A Aliphatic amidase; nitrilase superfamily, hydrolase, acyl transfer, thiol enzymes, hydroxamic acid; HET: C3Y; 1.25A {Pseudomonas aeruginosa} PDB: 2plq_A
Probab=79.79 E-value=6.3 Score=34.66 Aligned_cols=71 Identities=18% Similarity=0.281 Sum_probs=44.5
Q ss_pred HHHHHHHCCCeEEEcCCCCCCCCCCCCcchhhhhhccCCCChHHHHHHHHHHHhcCcEEEEeeeeeecCC-eeEEEEEEE
Q 025863 106 AIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGSIPERSGD-RLYNTCCVF 184 (247)
Q Consensus 106 ~i~~Aa~~gadLVVfPE~~l~g~~~~~~~~~~e~~~~~~~~~~~~~~l~~~Ar~~~i~Iv~Gs~~e~~~~-~~yNsa~li 184 (247)
..+.++..|+|+|+.|=.|. +. . . ..+...++.-|.+++++++.-...-.+++ .++=.+.++
T Consensus 174 ~~r~l~~~Gadlll~psa~~--~~--~-----~--------~~~~~l~~arA~En~~~vv~an~~G~~~~~~~~G~S~Ii 236 (341)
T 2uxy_A 174 IWRDCAMKGAELIVRCQGYM--YP--A-----K--------DQQVMMAKAMAWANNCYVAVANAAGFDGVYSYFGHSAII 236 (341)
T ss_dssp HHHHHHHTTCSEEEEEECCB--TT--C-----H--------HHHHHHHHHHHHHHTCEEEEEECEEECSSCEEECCCEEE
T ss_pred HHHHHHHcCCCEEEEcCCCC--CC--c-----H--------HHHHHHHHHHHHhCCcEEEEECCCCCCCCceeeeEEEEE
Confidence 44555668999999996542 11 0 0 14555677788899999876432212222 233356889
Q ss_pred ccCCcEEEE
Q 025863 185 GSDGKLIAK 193 (247)
Q Consensus 185 ~p~G~il~~ 193 (247)
+|+|+++..
T Consensus 237 dp~G~vla~ 245 (341)
T 2uxy_A 237 GFDGRTLGE 245 (341)
T ss_dssp CTTSCEEEE
T ss_pred CCCCCEEEE
Confidence 999998763
No 19
>3n05_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, protein structure initiative, P nysgrc; 2.35A {Streptomyces avermitilis}
Probab=74.89 E-value=11 Score=35.84 Aligned_cols=73 Identities=18% Similarity=0.255 Sum_probs=46.1
Q ss_pred HHHHHHHCCCeEEEcCCCCCCCCCCCCcchhhhhhccCCCChHHHHHHHHHHHhcCcEEEEeeeeeecCCeeEE-EEEEE
Q 025863 106 AIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGSIPERSGDRLYN-TCCVF 184 (247)
Q Consensus 106 ~i~~Aa~~gadLVVfPE~~l~g~~~~~~~~~~e~~~~~~~~~~~~~~l~~~Ar~~~i~Iv~Gs~~e~~~~~~yN-sa~li 184 (247)
..+.++..|||+++.|=.+. |.... .......++..|.+++++++.-...-.+++..|. .++++
T Consensus 172 ~~~~la~~Ga~ii~~psa~p--~~~gk-------------~~~~~~l~~~rA~e~~~~vv~an~~G~~~~~~f~G~S~ii 236 (590)
T 3n05_A 172 RVPAARSAGAGLLLSVNASP--YERDK-------------DDTRLELVRKRAQEAGCTTAYLAMIGGQDELVFDGDSIVV 236 (590)
T ss_dssp HHHHHHHTTCSEEEEEECCB--CCCCS-------------SCHHHHHHHHHHHHHTSEEEEEECEEEETTEEEEBCCEEE
T ss_pred HHHHHHHcCCCEEEEecCCc--cccCc-------------HHHHHHHHHHHHHHhCCEEEEEecccCCCCeEEeCcEEEE
Confidence 33445568999999986543 21110 0244566788899999999764332233444444 45888
Q ss_pred ccCCcEEEE
Q 025863 185 GSDGKLIAK 193 (247)
Q Consensus 185 ~p~G~il~~ 193 (247)
+|+|+++..
T Consensus 237 dp~G~vla~ 245 (590)
T 3n05_A 237 DRDGEVVAR 245 (590)
T ss_dssp CTTSCEEEE
T ss_pred CCCCcEEEE
Confidence 999998764
No 20
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=74.83 E-value=14 Score=31.48 Aligned_cols=73 Identities=12% Similarity=0.064 Sum_probs=46.4
Q ss_pred eEEEEEeccc------ccCHHHHHHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCCCcchhhhhhccCCCChHHHHHHHHH
Q 025863 83 FKVGLCQLSV------TADKERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEV 156 (247)
Q Consensus 83 ~kValvQ~~i------~~d~~~n~~~i~~~i~~Aa~~gadLVVfPE~~l~g~~~~~~~~~~e~~~~~~~~~~~~~~l~~~ 156 (247)
+++..+.... ....++..+.+++.++.|..-|++.|++|- ... ......+ +.. -+.+..+.+.
T Consensus 90 L~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~A~~lG~~~v~~~~--~~~--~~~~~~~-~~~------~~~l~~l~~~ 158 (305)
T 3obe_A 90 LRISSSHLTPSLREYTKENMPKFDEFWKKATDIHAELGVSCMVQPS--LPR--IENEDDA-KVV------SEIFNRAGEI 158 (305)
T ss_dssp CEEEEEBCCCSCCCCCGGGHHHHHHHHHHHHHHHHHHTCSEEEECC--CCC--CSSHHHH-HHH------HHHHHHHHHH
T ss_pred CeEEEeeccccccccchhhHHHHHHHHHHHHHHHHHcCCCEEEeCC--CCC--CCCHHHH-HHH------HHHHHHHHHH
Confidence 5665554433 123567788899999999999999999872 111 1111111 111 2566778888
Q ss_pred HHhcCcEEEE
Q 025863 157 ARLLKITIVG 166 (247)
Q Consensus 157 Ar~~~i~Iv~ 166 (247)
|+++|+.+.+
T Consensus 159 a~~~Gv~l~l 168 (305)
T 3obe_A 159 TKKAGILWGY 168 (305)
T ss_dssp HHTTTCEEEE
T ss_pred HHHcCCEEEE
Confidence 8999998865
No 21
>3ivz_A Nitrilase; alpha-beta sandwich, hydrolase; 1.57A {Pyrococcus abyssi} SCOP: d.160.1.2 PDB: 3iw3_A 3ki8_A 3klc_A 1j31_A
Probab=74.66 E-value=8.1 Score=32.29 Aligned_cols=67 Identities=15% Similarity=0.098 Sum_probs=41.3
Q ss_pred HHHHHHCCCeEEEcCCCCCCCCCCCCcchhhhhhccCCCChHHHHHHHHHHHhcCcEEEEeeeeeecCCe-eEEEEEEEc
Q 025863 107 IEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGSIPERSGDR-LYNTCCVFG 185 (247)
Q Consensus 107 i~~Aa~~gadLVVfPE~~l~g~~~~~~~~~~e~~~~~~~~~~~~~~l~~~Ar~~~i~Iv~Gs~~e~~~~~-~yNsa~li~ 185 (247)
.+..+..|+|+++.|=.|... .+...++.-|.+++++++.-...-.+++. ++=.+.+++
T Consensus 155 ~r~~~~~ga~li~~ps~~~~~--------------------~~~~~~~~rA~en~~~vv~~n~~G~~~~~~~~G~S~ii~ 214 (262)
T 3ivz_A 155 ARTLALKGADVIAHPANLVMP--------------------YAPRAMPIRALENKVYTVTADRVGEERGLKFIGKSLIAS 214 (262)
T ss_dssp HHHHHHTTCSEEEEEECCCSS--------------------CHHHHHHHHHHHHTCEEEEEECCSEETTEECCCCCEEEC
T ss_pred HHHHHHCCCCEEEEcCCCCch--------------------HHHHHHHHHHHhcCcEEEEECCCCcCCCceEeeeEEEEC
Confidence 445567899999999775321 11234566788999999765321122222 222358899
Q ss_pred cCCcEEEE
Q 025863 186 SDGKLIAK 193 (247)
Q Consensus 186 p~G~il~~ 193 (247)
|+|+++..
T Consensus 215 p~G~il~~ 222 (262)
T 3ivz_A 215 PKAEVLSM 222 (262)
T ss_dssp TTSCEEEE
T ss_pred CCCCEeec
Confidence 99998753
No 22
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=71.67 E-value=12 Score=31.26 Aligned_cols=62 Identities=18% Similarity=0.210 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCCCcchhhhhhccCCCChHHHHHHHHHHHhcCcEEEE
Q 025863 97 ERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVG 166 (247)
Q Consensus 97 ~~n~~~i~~~i~~Aa~~gadLVVfPE~~l~g~~~~~~~~~~e~~~~~~~~~~~~~~l~~~Ar~~~i~Iv~ 166 (247)
++.++.+++.++.|..-|++.|+++ .. ..+......+..+.. -+.++.+.+.|+++|+.+.+
T Consensus 104 ~~~~~~~~~~i~~A~~lG~~~v~~~-~~-~~~~~~~~~~~~~~~------~~~l~~l~~~a~~~Gv~l~l 165 (295)
T 3cqj_A 104 AQGLEIMRKAIQFAQDVGIRVIQLA-GY-DVYYQEANNETRRRF------RDGLKESVEMASRAQVTLAM 165 (295)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEEC-CC-SCSSSCCCHHHHHHH------HHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEC-CC-CCCcCcCHHHHHHHH------HHHHHHHHHHHHHhCCEEEE
Confidence 4567889999999999999999987 11 111111111111111 25567777888899998765
No 23
>2dyu_A Formamidase; AMIF, CEK, catalytic triad, helicobacter pylori aliphatic amidase, hydrolase; 1.75A {Helicobacter pylori} PDB: 2dyv_A 2e2l_A 2e2k_A
Probab=70.68 E-value=9.5 Score=33.37 Aligned_cols=71 Identities=13% Similarity=0.055 Sum_probs=43.9
Q ss_pred HHHHHHHCCCeEEEcCCCCCCCCCCCCcchhhhhhccCCCChHHHHHHHHHHHhcCcEEEEeeeeeecC-CeeEEEEEEE
Q 025863 106 AIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGSIPERSG-DRLYNTCCVF 184 (247)
Q Consensus 106 ~i~~Aa~~gadLVVfPE~~l~g~~~~~~~~~~e~~~~~~~~~~~~~~l~~~Ar~~~i~Iv~Gs~~e~~~-~~~yNsa~li 184 (247)
..+.++..|+|+|+.|=.|... . . ......++.-|.+++++++.-...-.++ ..++=.+.++
T Consensus 174 ~~r~~~~~Gadlil~psaw~~~----~-----~--------~~~~~~~~arA~En~~~vv~an~~G~~~~~~~~G~S~Ii 236 (334)
T 2dyu_A 174 LAREAAYKGCNVYIRISGYSTQ----V-----N--------DQWILTNRSNAWHNLMYTVSVNLAGYDNVFYYFGEGQIC 236 (334)
T ss_dssp HHHHHHHTTCSEEEEEESSCTT----S-----H--------HHHHHHHHHHHHHHTCEEEEEECSBSSSSCCCCCEEEEE
T ss_pred HHHHHHHcCCCEEEEeCCCCCC----c-----H--------HHHHHHHHHHHHhCCCEEEEECCCcCCCCeeeeeEEEEE
Confidence 4455556899999999654211 0 0 1345556777889999987642211112 2334456788
Q ss_pred ccCCcEEEE
Q 025863 185 GSDGKLIAK 193 (247)
Q Consensus 185 ~p~G~il~~ 193 (247)
+|+|+++..
T Consensus 237 dp~G~vla~ 245 (334)
T 2dyu_A 237 NFDGTTLVQ 245 (334)
T ss_dssp CTTSCEEEE
T ss_pred CCCCCEeee
Confidence 999998764
No 24
>4f4h_A Glutamine dependent NAD+ synthetase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, ligase; 1.75A {Burkholderia thailandensis}
Probab=70.67 E-value=8.6 Score=36.47 Aligned_cols=73 Identities=18% Similarity=0.233 Sum_probs=47.4
Q ss_pred HHHHHHHCCCeEEEcCCCCCCCCCCCCcchhhhhhccCCCChHHHHHHHHHHHhcCcEEEEeeeeeecCC-eeEEEEEEE
Q 025863 106 AIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGSIPERSGD-RLYNTCCVF 184 (247)
Q Consensus 106 ~i~~Aa~~gadLVVfPE~~l~g~~~~~~~~~~e~~~~~~~~~~~~~~l~~~Ar~~~i~Iv~Gs~~e~~~~-~~yNsa~li 184 (247)
..+.++..||++++.|=.+.... . .. ......++..|.+++++++.-...-.+++ .++-.++++
T Consensus 177 ~~r~la~~GA~ii~~psAs~~~~--g-----k~--------~~r~~ll~arA~e~~~~vvy~N~vG~~~~~~f~G~S~ii 241 (565)
T 4f4h_A 177 AAQLAKAAGAQVLIVPNGSPYHM--N-----KD--------AVRIDILRARIRETGLPMVYVNLVGGQDELVFDGGSFVL 241 (565)
T ss_dssp HHHHHHHTTCSEEEEEECCBCCT--T-----HH--------HHHHHHHHHHHHHHCCCEEEEECEEEETTEEEEBCCEEE
T ss_pred hhHHHHhCCCeeeeccccccccc--C-----cH--------HHHHHHHHHHHHHhCCcEEEeeeecCCCCeEEECCccee
Confidence 34455678999999996543211 0 01 13455678889999999876432223444 355677999
Q ss_pred ccCCcEEEE
Q 025863 185 GSDGKLIAK 193 (247)
Q Consensus 185 ~p~G~il~~ 193 (247)
+|+|+++..
T Consensus 242 dp~G~vla~ 250 (565)
T 4f4h_A 242 DGAGELVAK 250 (565)
T ss_dssp CTTSCEEEE
T ss_pred cCCCcEEEE
Confidence 999998764
No 25
>1f89_A 32.5 kDa protein YLR351C; nitrilase, dimer, structural genomics, four layer sandwich, PSI, protein structure initiative; 2.40A {Saccharomyces cerevisiae} SCOP: d.160.1.1
Probab=66.10 E-value=11 Score=31.77 Aligned_cols=70 Identities=21% Similarity=0.242 Sum_probs=42.1
Q ss_pred HHHHHHCCCeEEEcCCCCCCCCCCCCcchhhhhhccCCCChHHHHHHHHHHHhcCcEEEEeeeeee-c--CCeeEEEEEE
Q 025863 107 IEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGSIPER-S--GDRLYNTCCV 183 (247)
Q Consensus 107 i~~Aa~~gadLVVfPE~~l~g~~~~~~~~~~e~~~~~~~~~~~~~~l~~~Ar~~~i~Iv~Gs~~e~-~--~~~~yNsa~l 183 (247)
.+..+..|+|+++.|-.|.. .... ..+...++.-|.+++++++.-. ... . +..++=.+.+
T Consensus 178 ~r~l~~~Ga~ll~~ps~~~~---------~~~~-------~~~~~~~~~rA~en~~~vv~~n-~~G~~~~~~~~~G~S~i 240 (291)
T 1f89_A 178 AMLSARKGAFAMIYPSAFNT---------VTGP-------LHWHLLARSRAVDNQVYVMLCS-PARNLQSSYHAYGHSIV 240 (291)
T ss_dssp HHHHHHTTEEEEEEECCCBT---------THHH-------HHHHHHHHHHHHHHTSEEEEEC-CCCCTTSSSCBCCCCEE
T ss_pred HHHHHhhCCCEEEECCcCCC---------CCcH-------HHHHHHHHHHHHHcCCEEEEec-CccCCCCCCeeeeEEEE
Confidence 44445689999999953321 0011 1344556677889999987642 221 1 1223335688
Q ss_pred EccCCcEEEE
Q 025863 184 FGSDGKLIAK 193 (247)
Q Consensus 184 i~p~G~il~~ 193 (247)
++|+|+++..
T Consensus 241 i~p~G~vl~~ 250 (291)
T 1f89_A 241 VDPRGKIVAE 250 (291)
T ss_dssp ECTTSCEEEE
T ss_pred ECCCCCEEEe
Confidence 9999998753
No 26
>2e11_A Hydrolase; dimethylarsenic inhibi complex, cacodylate; 1.73A {Xanthomonas campestris PV}
Probab=65.96 E-value=29 Score=28.75 Aligned_cols=63 Identities=14% Similarity=0.060 Sum_probs=39.9
Q ss_pred CCeEEEcCCCCCCCCCCCCcchhhhhhccCCCChHHHHHHHHHHHhcCcEEEEeeeeeecCC--eeEEEEEEEccCCcEE
Q 025863 114 GAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGSIPERSGD--RLYNTCCVFGSDGKLI 191 (247)
Q Consensus 114 gadLVVfPE~~l~g~~~~~~~~~~e~~~~~~~~~~~~~~l~~~Ar~~~i~Iv~Gs~~e~~~~--~~yNsa~li~p~G~il 191 (247)
|+|+++.|=.|... . . ..+...++.-|.+++++++.-...-.+++ .++=.+.+++|+|+++
T Consensus 165 ga~~i~~~s~w~~~--------~-~--------~~~~~~~~~rA~en~~~vv~an~~G~~~~~~~~~G~S~ii~p~G~v~ 227 (266)
T 2e11_A 165 DFDLQLFVANWPSA--------R-A--------YAWKTLLRARAIENLCFVAAVNRVGVDGNQLHYAGDSAVIDFLGQPQ 227 (266)
T ss_dssp SCSEEEEEECCCGG--------G-H--------HHHHHHHHHHHHHTTSEEEEEECEEECTTSCEEEEEEEEECTTSCEE
T ss_pred CCcEEEEeCCCCCC--------c-h--------HHHHHHHHHHHHhcCcEEEEEcCCcCCCCCceEeeeEEEECCCCcee
Confidence 89999998775310 0 0 13445566778899999976422212222 3344578999999987
Q ss_pred EE
Q 025863 192 AK 193 (247)
Q Consensus 192 ~~ 193 (247)
..
T Consensus 228 ~~ 229 (266)
T 2e11_A 228 VE 229 (266)
T ss_dssp EE
T ss_pred ee
Confidence 53
No 27
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=64.90 E-value=21 Score=29.65 Aligned_cols=62 Identities=15% Similarity=-0.001 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCCCcchhhhhhccCCCChHHHHHHHHHHHhcCcEEEEe
Q 025863 96 KERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGG 167 (247)
Q Consensus 96 ~~~n~~~i~~~i~~Aa~~gadLVVfPE~~l~g~~~~~~~~~~e~~~~~~~~~~~~~~l~~~Ar~~~i~Iv~G 167 (247)
.++.++.+++.++.|..-|++.|++.= |+.........+.. -+.++.+.+.|+++|+.+.+=
T Consensus 97 r~~~~~~~~~~i~~a~~lG~~~v~~~~----G~~~~~~~~~~~~~------~~~l~~l~~~a~~~Gv~l~lE 158 (290)
T 3tva_A 97 RASRVAEMKEISDFASWVGCPAIGLHI----GFVPESSSPDYSEL------VRVTQDLLTHAANHGQAVHLE 158 (290)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSEEEECC----CCCCCTTSHHHHHH------HHHHHHHHHHHHTTTCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEcC----CCCcccchHHHHHH------HHHHHHHHHHHHHcCCEEEEe
Confidence 467788999999999999999988742 33222211111111 255677888888999988764
No 28
>1ems_A Nitfhit, NIT-fragIle histidine triad fusion protein; WORM, nitrilase, nucleotide-binding protein, cancer; 2.80A {Caenorhabditis elegans} SCOP: d.13.1.1 d.160.1.1
Probab=64.72 E-value=22 Score=32.05 Aligned_cols=72 Identities=17% Similarity=0.179 Sum_probs=42.7
Q ss_pred HHHHHHHCCCeEEEcCCCCCCCCCCCCcchhhhhhccCCCChHHHHHHHHHHHhcCcEEEEeeeeeec-CCee-EEEEEE
Q 025863 106 AIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGSIPERS-GDRL-YNTCCV 183 (247)
Q Consensus 106 ~i~~Aa~~gadLVVfPE~~l~g~~~~~~~~~~e~~~~~~~~~~~~~~l~~~Ar~~~i~Iv~Gs~~e~~-~~~~-yNsa~l 183 (247)
..+..+..|+|+++.|=.|. + .... ..+...++.-|.+++++++.-+..-.+ ++.. +=.+.+
T Consensus 177 ~~r~l~~~Ga~il~~psa~~--~-------~~~~-------~~~~~~~~arA~En~~~vv~an~~G~~~~~~~~~G~S~i 240 (440)
T 1ems_A 177 LSLWNRKRGAQLLSFPSAFT--L-------NTGL-------AHWETLLRARAIENQCYVVAAAQTGAHNPKRQSYGHSMV 240 (440)
T ss_dssp HHHHHHHTTCSEEECCBCCC--H-------HHHH-------HHHHHHHHHHHHHHTCEEEECBBEEEEETTEEEECCCEE
T ss_pred HHHHHHHcCCcEEEECCcCC--C-------CCcH-------HHHHHHHHHHHHhcCcEEEEecccccCCCCceeeeeeEE
Confidence 34444567999999986431 1 0000 133445666788999999865321112 2222 224688
Q ss_pred EccCCcEEEE
Q 025863 184 FGSDGKLIAK 193 (247)
Q Consensus 184 i~p~G~il~~ 193 (247)
++|+|+++..
T Consensus 241 i~P~G~vla~ 250 (440)
T 1ems_A 241 VDPWGAVVAQ 250 (440)
T ss_dssp ECTTSCEEEE
T ss_pred ECCCCCeecc
Confidence 9999998764
No 29
>1uf5_A N-carbamyl-D-amino acid amidohydrolase; HET: CDT; 1.60A {Agrobacterium SP} SCOP: d.160.1.2 PDB: 1uf4_A* 1uf7_A* 1uf8_A* 1erz_A 1fo6_A 2ggl_A 2ggk_A
Probab=64.46 E-value=36 Score=28.63 Aligned_cols=43 Identities=9% Similarity=0.122 Sum_probs=26.9
Q ss_pred HHHHHHHHhcCcEEEEeeeeeecCC-eeEEEEEEEccCCcEEEE
Q 025863 151 AMLSEVARLLKITIVGGSIPERSGD-RLYNTCCVFGSDGKLIAK 193 (247)
Q Consensus 151 ~~l~~~Ar~~~i~Iv~Gs~~e~~~~-~~yNsa~li~p~G~il~~ 193 (247)
..++.-|.+++++++.-...-.+++ .++=.+.+++|+|+++..
T Consensus 217 ~~~~~rA~en~~~vv~~n~~G~~~~~~~~G~S~ii~p~G~vl~~ 260 (303)
T 1uf5_A 217 LSMQAGSYQNGAWSAAAGKAGMEENCMLLGHSCIVAPTGEIVAL 260 (303)
T ss_dssp HHHHHHHHHHTCEEEEEEBCEEETTEEECCCCEEECTTSCEEEE
T ss_pred HHHHhhhhcCCcEEEEECcccccCCccccceeEEECCCCCEecc
Confidence 3456678899999986532212222 233336789999998763
No 30
>3p94_A GDSL-like lipase; serine hydrolase, catalytic triad, flavodo structural genomics, joint center for structural genomics; HET: MSE PG4; 1.93A {Parabacteroides distasonis}
Probab=61.97 E-value=37 Score=26.03 Aligned_cols=77 Identities=14% Similarity=0.021 Sum_probs=44.9
Q ss_pred eEEEEEecccc--------cCHHHHHHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCCCcchhhhhhccCCCChHHHHHHH
Q 025863 83 FKVGLCQLSVT--------ADKERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLS 154 (247)
Q Consensus 83 ~kValvQ~~i~--------~d~~~n~~~i~~~i~~Aa~~gadLVVfPE~~l~g~~~~~~~~~~e~~~~~~~~~~~~~~l~ 154 (247)
-.+.++++..- .+.+...+.+.++++.+.+.++.+|+.--...............+.+ ..+-+.++
T Consensus 75 pd~vvi~~G~ND~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~vil~~~~p~~~~~~~~~~~~~~~~------~~~n~~l~ 148 (204)
T 3p94_A 75 PKAVVILAGINDIAHNNGVIALENVFGNLVSMAELAKANHIKVIFCSVLPAYDFPWRPGMQPADKV------IQLNKWIK 148 (204)
T ss_dssp EEEEEEECCHHHHTTTTSCCCHHHHHHHHHHHHHHHHHTTCEEEEECCCCCSCBTTBTTCCCHHHH------HHHHHHHH
T ss_pred CCEEEEEeecCccccccCCCCHHHHHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCccccHHHHH------HHHHHHHH
Confidence 35667776531 25566677777788777778999988742221111100000111122 25667889
Q ss_pred HHHHhcCcEEE
Q 025863 155 EVARLLKITIV 165 (247)
Q Consensus 155 ~~Ar~~~i~Iv 165 (247)
++|+++++.++
T Consensus 149 ~~a~~~~v~~i 159 (204)
T 3p94_A 149 EYADKNGLTYV 159 (204)
T ss_dssp HHHHHTTCEEE
T ss_pred HHHHHcCCcEE
Confidence 99999998775
No 31
>2w1v_A Nitrilase-2, nitrilase homolog 2; hydrolase; 1.49A {Mus musculus}
Probab=60.44 E-value=20 Score=30.02 Aligned_cols=70 Identities=13% Similarity=0.175 Sum_probs=41.5
Q ss_pred HHHHHHCCCeEEEcCCCCCCCCCCCCcchhhhhhccCCCChHHHHHHHHHHHhcCcEEEEeeeeeecC--CeeEEEEEEE
Q 025863 107 IEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGSIPERSG--DRLYNTCCVF 184 (247)
Q Consensus 107 i~~Aa~~gadLVVfPE~~l~g~~~~~~~~~~e~~~~~~~~~~~~~~l~~~Ar~~~i~Iv~Gs~~e~~~--~~~yNsa~li 184 (247)
.+..+..|+|+++.|-.|. .. ... ..+...++.-|.+++++++.-...-.++ ..++=.+.++
T Consensus 162 ~r~~~~~ga~ll~~ps~~~--~~-------~~~-------~~~~~~~~~rA~en~~~vv~~n~~G~~~~~~~~~G~S~ii 225 (276)
T 2w1v_A 162 AQIYAQRGCQLLVYPGAFN--LT-------TGP-------AHWELLQRARAVDNQVYVATASPARDDKASYVAWGHSTVV 225 (276)
T ss_dssp HHHHHHTTEEEEEEECCCC--TT-------HHH-------HHHHHHHHHHHHHHTCEEEEECCCCCTTSSSCCCCCCEEE
T ss_pred HHHHHHcCCCEEEECCcCC--Cc-------CCH-------HHHHHHHHHHHHHcCcEEEEecccccCCCCceeeeEeEEE
Confidence 4445567999999996432 10 000 1344456667889999998642211111 1233346789
Q ss_pred ccCCcEEE
Q 025863 185 GSDGKLIA 192 (247)
Q Consensus 185 ~p~G~il~ 192 (247)
+|+|+++.
T Consensus 226 ~p~G~v~~ 233 (276)
T 2w1v_A 226 DPWGQVLT 233 (276)
T ss_dssp CTTSCEEE
T ss_pred CCCCCEeE
Confidence 99999875
No 32
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=60.06 E-value=59 Score=26.57 Aligned_cols=63 Identities=8% Similarity=-0.096 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCCCcchhhhhhccCCCChHHHHHHHHHHHhcCcEEEEe
Q 025863 96 KERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGG 167 (247)
Q Consensus 96 ~~~n~~~i~~~i~~Aa~~gadLVVfPE~~l~g~~~~~~~~~~e~~~~~~~~~~~~~~l~~~Ar~~~i~Iv~G 167 (247)
.++.++.+++.++.|..-|++.|++.=. .+ . ..+..+..+.. -+.++.+.+.|+++|+.+.+=
T Consensus 88 r~~~~~~~~~~i~~A~~lGa~~v~~~~g-~~-~-~~~~~~~~~~~------~~~l~~l~~~a~~~Gv~l~lE 150 (269)
T 3ngf_A 88 EQEFRDNVDIALHYALALDCRTLHAMSG-IT-E-GLDRKACEETF------IENFRYAADKLAPHGITVLVE 150 (269)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEECCBC-BC-T-TSCHHHHHHHH------HHHHHHHHHHHGGGTCEEEEC
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEccC-CC-C-CCCHHHHHHHH------HHHHHHHHHHHHHcCCEEEEe
Confidence 5677888999999999999999887322 11 0 00111111221 256677888889999988763
No 33
>1iuq_A Glycerol-3-phosphate acyltransferase; open twisted alpha/beta, four helix bundle; 1.55A {Cucurbita moschata} SCOP: c.112.1.1 PDB: 1k30_A
Probab=59.54 E-value=27 Score=31.44 Aligned_cols=66 Identities=6% Similarity=0.026 Sum_probs=41.8
Q ss_pred CHHHHHHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCCCcchhhhhhccCCCChHHHHHHHHHHHhcCcE--EE
Q 025863 95 DKERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKIT--IV 165 (247)
Q Consensus 95 d~~~n~~~i~~~i~~Aa~~gadLVVfPE~~l~g~~~~~~~~~~e~~~~~~~~~~~~~~l~~~Ar~~~i~--Iv 165 (247)
+..+|.+.+.+.++...+.|..++||||..=.--...+-.-...+. .....+.+..+|.+.++. |+
T Consensus 204 ~~r~n~ksl~~~~~~Lk~GG~sI~IFPEGTRsR~~~~~g~l~~~~F-----k~gs~~~~~~LA~ksg~P~hIv 271 (367)
T 1iuq_A 204 KRKANTRSLKEMALLLRGGSQLIWIAPSGGRDRPDPSTGEWYPAPF-----DASSVDNMRRLIQHSDVPGHLF 271 (367)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCEEEECTTCSCCCBCTTTCCBCCCCC-----CHHHHHHHHHHHHTSSSCEEEE
T ss_pred hhHHHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCCCCCCccccccc-----cchhhhHHHHHHHHcCCCceEE
Confidence 3446677777777776667899999999864321110000011112 246888999999999998 65
No 34
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=58.77 E-value=33 Score=28.42 Aligned_cols=64 Identities=9% Similarity=0.060 Sum_probs=40.2
Q ss_pred HHHHHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCC--CcchhhhhhccCCCChHHHHHHHHHHHhcCcEEEEe
Q 025863 97 ERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHD--SFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGG 167 (247)
Q Consensus 97 ~~n~~~i~~~i~~Aa~~gadLVVfPE~~l~g~~~~--~~~~~~e~~~~~~~~~~~~~~l~~~Ar~~~i~Iv~G 167 (247)
++.++.+++.++.|..-|++.|+++=.+. .+... +.....+.. -+.++.+.+.|+++|+.+.+=
T Consensus 100 ~~~~~~~~~~i~~a~~lGa~~v~~~~g~~-~~~~~~p~~~~~~~~~------~~~l~~l~~~a~~~Gv~l~lE 165 (287)
T 3kws_A 100 KECMDTMKEIIAAAGELGSTGVIIVPAFN-GQVPALPHTMETRDFL------CEQFNEMGTFAAQHGTSVIFE 165 (287)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEECSCCT-TCCSBCCSSHHHHHHH------HHHHHHHHHHHHHTTCCEEEC
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEecCcC-CcCCCCCCHHHHHHHH------HHHHHHHHHHHHHcCCEEEEE
Confidence 56778899999999999999888752221 11100 111111221 256677888889999988653
No 35
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=56.11 E-value=28 Score=28.38 Aligned_cols=61 Identities=13% Similarity=0.129 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCCCc--chhhhhhccCCCChHHHHHHHHHHHhcCcEEEEe
Q 025863 97 ERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSF--PVYAEDIDAGGDASPSTAMLSEVARLLKITIVGG 167 (247)
Q Consensus 97 ~~n~~~i~~~i~~Aa~~gadLVVfPE~~l~g~~~~~~--~~~~e~~~~~~~~~~~~~~l~~~Ar~~~i~Iv~G 167 (247)
++.++.+++.++.|..-|++.|++. +|+..... .+..+.. -+.++.+.+.|+++|+.+.+=
T Consensus 80 ~~~~~~~~~~i~~a~~lG~~~v~~~----~g~~~~~~~~~~~~~~~------~~~l~~l~~~a~~~gv~l~lE 142 (278)
T 1i60_A 80 NEIITEFKGMMETCKTLGVKYVVAV----PLVTEQKIVKEEIKKSS------VDVLTELSDIAEPYGVKIALE 142 (278)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEEE----CCBCSSCCCHHHHHHHH------HHHHHHHHHHHGGGTCEEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEe----cCCCCCCCCHHHHHHHH------HHHHHHHHHHHHhcCCEEEEE
Confidence 4567888999999998899988872 22221111 1111111 255667777888889987653
No 36
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=55.03 E-value=26 Score=28.58 Aligned_cols=65 Identities=23% Similarity=0.202 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCCCcchhhhhhccCCCChHHHHHHHHHHHhcCcEEEEe
Q 025863 96 KERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGG 167 (247)
Q Consensus 96 ~~~n~~~i~~~i~~Aa~~gadLVVfPE~~l~g~~~~~~~~~~e~~~~~~~~~~~~~~l~~~Ar~~~i~Iv~G 167 (247)
.++.++.+++.++.|..-|++.|+++=...+.. ..+..+..+.. -+.++.+.+.|+++|+.+.+=
T Consensus 78 r~~~~~~~~~~i~~a~~lG~~~v~~~~g~~~~~-~~~~~~~~~~~------~~~l~~l~~~a~~~gv~l~lE 142 (275)
T 3qc0_A 78 REKAIDDNRRAVDEAAELGADCLVLVAGGLPGG-SKNIDAARRMV------VEGIAAVLPHARAAGVPLAIE 142 (275)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSCEEEECBCCCTT-CCCHHHHHHHH------HHHHHHHHHHHHHHTCCEEEC
T ss_pred HHHHHHHHHHHHHHHHHhCCCEEEEeeCCCCCC-CcCHHHHHHHH------HHHHHHHHHHHHHcCCEEEEe
Confidence 356678899999999999999887753222111 01111111221 256677888888999988764
No 37
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=53.79 E-value=49 Score=26.68 Aligned_cols=61 Identities=10% Similarity=-0.051 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCCCc--chhhhhhccCCCChHHHHHHHHHHHhcCcEEEE
Q 025863 96 KERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSF--PVYAEDIDAGGDASPSTAMLSEVARLLKITIVG 166 (247)
Q Consensus 96 ~~~n~~~i~~~i~~Aa~~gadLVVfPE~~l~g~~~~~~--~~~~e~~~~~~~~~~~~~~l~~~Ar~~~i~Iv~ 166 (247)
.++.++.+++.++.|.+-|++.|++. +|...... .+..+.. -+.++.+.+.|+++|+.+.+
T Consensus 80 ~~~~~~~~~~~i~~a~~lG~~~v~~~----~g~~~~~~~~~~~~~~~------~~~l~~l~~~a~~~gv~l~~ 142 (260)
T 1k77_A 80 EHEAHADIDLALEYALALNCEQVHVM----AGVVPAGEDAERYRAVF------IDNIRYAADRFAPHGKRILV 142 (260)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEECC----CCBCCTTSCHHHHHHHH------HHHHHHHHHHHGGGTCEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEC----cCCCCCCCCHHHHHHHH------HHHHHHHHHHHHHcCCEEEE
Confidence 46778899999999999999998873 23221111 1111111 25667777888899998876
No 38
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=50.40 E-value=49 Score=27.93 Aligned_cols=60 Identities=12% Similarity=0.079 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCCCcchhhhhhccCCCChHHHHHHHHHHHhcCcE--EEE
Q 025863 96 KERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKIT--IVG 166 (247)
Q Consensus 96 ~~~n~~~i~~~i~~Aa~~gadLVVfPE~~l~g~~~~~~~~~~e~~~~~~~~~~~~~~l~~~Ar~~~i~--Iv~ 166 (247)
.++.++.+++.++.|..-|++.|++|-. + .. .....+ +.. -+.++.+.+.|+++|+. +.+
T Consensus 103 ~~~~~~~~~~~i~~A~~lG~~~v~~~~~--~-~~-~~~~~~-~~~------~~~l~~l~~~a~~~Gv~~~l~~ 164 (303)
T 3l23_A 103 TPKIMEYWKATAADHAKLGCKYLIQPMM--P-TI-TTHDEA-KLV------CDIFNQASDVIKAEGIATGFGY 164 (303)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEECSC--C-CC-CSHHHH-HHH------HHHHHHHHHHHHHTTCTTCEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEECCC--C-CC-CCHHHH-HHH------HHHHHHHHHHHHHCCCcceEEE
Confidence 3667888999999999999999999732 1 11 111111 111 25677788888999998 754
No 39
>4fva_A 5'-tyrosyl-DNA phosphodiesterase; 5'-phosphotyrosyl-DNA diesterase, hydrolase; HET: EDO; 2.07A {Caenorhabditis elegans}
Probab=49.82 E-value=11 Score=29.97 Aligned_cols=39 Identities=10% Similarity=0.278 Sum_probs=23.9
Q ss_pred eEEEEEecccc----cCHHHHHHHHHHHHHHHHHCCCeEEEcCCCC
Q 025863 83 FKVGLCQLSVT----ADKERNIAHARRAIEEAAEKGAKLILLPEIW 124 (247)
Q Consensus 83 ~kValvQ~~i~----~d~~~n~~~i~~~i~~Aa~~gadLVVfPE~~ 124 (247)
+++-++-.|+. .+.....+.+.+.|+ +.++|||+|.|..
T Consensus 12 ~~l~v~s~Ni~g~~~~~~~~r~~~i~~~i~---~~~pDIi~LQEv~ 54 (256)
T 4fva_A 12 FEVSVMSWNIDGLDGRSLLTRMKAVAHIVK---NVNPDILFLQEVV 54 (256)
T ss_dssp CEEEEEEEECCTTCCTTHHHHHHHHHHHHH---HHCCSEEEEEEEC
T ss_pred CEEEEEEEecCCCCCcCHHHHHHHHHHHHH---HcCCCEEEEEecC
Confidence 45555555654 234444455555554 4589999999974
No 40
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=49.02 E-value=60 Score=26.75 Aligned_cols=65 Identities=8% Similarity=-0.004 Sum_probs=40.2
Q ss_pred HHHHHHHHHHHHHHHHHCCCeEEEcCCC--CCCCCCCCC--------cchhhhhhccCCCChHHHHHHHHHHHhcCcEEE
Q 025863 96 KERNIAHARRAIEEAAEKGAKLILLPEI--WNSPYSHDS--------FPVYAEDIDAGGDASPSTAMLSEVARLLKITIV 165 (247)
Q Consensus 96 ~~~n~~~i~~~i~~Aa~~gadLVVfPE~--~l~g~~~~~--------~~~~~e~~~~~~~~~~~~~~l~~~Ar~~~i~Iv 165 (247)
.++.++.+++.++.|..-|++.|+++.. +..|..... .....+.. -+.++.+.+.|+++|+.+.
T Consensus 85 ~~~~~~~~~~~i~~a~~lG~~~v~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~------~~~l~~l~~~a~~~gv~l~ 158 (301)
T 3cny_A 85 IEKASEAFEKHCQYLKAINAPVAVVSEQTYTIQRSDTANIFKDKPYFTDKEWDEV------CKGLNHYGEIAAKYGLKVA 158 (301)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEEEEECTTCCTTCSSCCTTTCCCCCCHHHHHHH------HHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEecCCCccccCcccCCcccccccCcHHHHHHH------HHHHHHHHHHHHHcCCEEE
Confidence 4456788899999999999999887642 111221110 11111111 2566778888889999876
Q ss_pred E
Q 025863 166 G 166 (247)
Q Consensus 166 ~ 166 (247)
+
T Consensus 159 l 159 (301)
T 3cny_A 159 Y 159 (301)
T ss_dssp E
T ss_pred E
Confidence 5
No 41
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=48.85 E-value=34 Score=27.96 Aligned_cols=63 Identities=10% Similarity=-0.014 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCCCcchhhhhhccCCCChHHHHHHHHHHHhcCcEEEEe
Q 025863 96 KERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGG 167 (247)
Q Consensus 96 ~~~n~~~i~~~i~~Aa~~gadLVVfPE~~l~g~~~~~~~~~~e~~~~~~~~~~~~~~l~~~Ar~~~i~Iv~G 167 (247)
.++.++.+++.++.|..-|++.|+++ ..++.. .......+.. -+.++.+.+.|+++|+.+.+=
T Consensus 79 ~~~~~~~~~~~i~~A~~lG~~~v~~~--~~p~~~-~~~~~~~~~~------~~~l~~l~~~a~~~Gv~l~lE 141 (281)
T 3u0h_A 79 FLRELSLLPDRARLCARLGARSVTAF--LWPSMD-EEPVRYISQL------ARRIRQVAVELLPLGMRVGLE 141 (281)
T ss_dssp HHHHHHTHHHHHHHHHHTTCCEEEEE--CCSEES-SCHHHHHHHH------HHHHHHHHHHHGGGTCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEe--ecCCCC-CcchhhHHHH------HHHHHHHHHHHHHcCCEEEEE
Confidence 34567788889999999999999843 111111 1111111111 255667777888999988764
No 42
>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}
Probab=48.82 E-value=39 Score=24.37 Aligned_cols=42 Identities=14% Similarity=0.045 Sum_probs=27.8
Q ss_pred HHHHHHHHHhcCcE-EEEeeeeeecCCeeEEEEEEEccCCcEEEEEe
Q 025863 150 TAMLSEVARLLKIT-IVGGSIPERSGDRLYNTCCVFGSDGKLIAKHR 195 (247)
Q Consensus 150 ~~~l~~~Ar~~~i~-Iv~Gs~~e~~~~~~yNsa~li~p~G~il~~Y~ 195 (247)
++...+.+++.|+. ++.+ +.....+.+ +++.+|+|..+..+.
T Consensus 77 vd~~~~~l~~~G~~~~~~~--p~~~~~G~~--~~~~DPdGn~iel~~ 119 (128)
T 3g12_A 77 LEKTVQELVKIPGAMCILD--PTDMPDGKK--AIVLDPDGHSIELCE 119 (128)
T ss_dssp HHHHHHHHTTSTTCEEEEE--EEECC-CEE--EEEECTTCCEEEEEC
T ss_pred HHHHHHHHHHCCCceeccC--ceeCCCccE--EEEECCCCCEEEEEE
Confidence 55666677888988 6544 333333333 889999999877654
No 43
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=48.08 E-value=75 Score=25.67 Aligned_cols=71 Identities=13% Similarity=0.065 Sum_probs=41.6
Q ss_pred eEEEEEecc--cccCHHHHHHHHHHHHHHHHHCCCeEEEcCCCCCCCCCC-CCcchhhhhhccCCCChHHHHHHHHHHHh
Q 025863 83 FKVGLCQLS--VTADKERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSH-DSFPVYAEDIDAGGDASPSTAMLSEVARL 159 (247)
Q Consensus 83 ~kValvQ~~--i~~d~~~n~~~i~~~i~~Aa~~gadLVVfPE~~l~g~~~-~~~~~~~e~~~~~~~~~~~~~~l~~~Ar~ 159 (247)
+++..+... .....++..+.+++.++.|..-|++.|++- +|+.. +.+... . -+.++.+.+.|++
T Consensus 65 l~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~v~~~----~g~~~~~~~~~~---~------~~~l~~l~~~a~~ 131 (272)
T 2q02_A 65 LEIVTINAVYPFNQLTEEVVKKTEGLLRDAQGVGARALVLC----PLNDGTIVPPEV---T------VEAIKRLSDLFAR 131 (272)
T ss_dssp CEEEEEEEETTTTSCCHHHHHHHHHHHHHHHHHTCSEEEEC----CCCSSBCCCHHH---H------HHHHHHHHHHHHT
T ss_pred CeEEechhhhccCCcHHHHHHHHHHHHHHHHHhCCCEEEEc----cCCCchhHHHHH---H------HHHHHHHHHHHHH
Confidence 666555432 211124456888999999988899988751 22211 111111 0 1456677778888
Q ss_pred cCcEEEE
Q 025863 160 LKITIVG 166 (247)
Q Consensus 160 ~~i~Iv~ 166 (247)
+|+.+.+
T Consensus 132 ~gv~l~~ 138 (272)
T 2q02_A 132 YDIQGLV 138 (272)
T ss_dssp TTCEEEE
T ss_pred cCCEEEE
Confidence 8988765
No 44
>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*
Probab=47.45 E-value=53 Score=22.90 Aligned_cols=46 Identities=15% Similarity=0.164 Sum_probs=30.0
Q ss_pred HHHHHHHHHhcCcEEEEeeeeeecCCeeEEEEEEEccCCcEEEEEe
Q 025863 150 TAMLSEVARLLKITIVGGSIPERSGDRLYNTCCVFGSDGKLIAKHR 195 (247)
Q Consensus 150 ~~~l~~~Ar~~~i~Iv~Gs~~e~~~~~~yNsa~li~p~G~il~~Y~ 195 (247)
++.+.+.+++.|+.++.+.......+..+..+++.+|+|..+..+.
T Consensus 84 ~~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~ 129 (133)
T 3ey7_A 84 LSDAMKHVEDQGVTIMEGPVKRTGAQGAITSFYFRDPDGNLIEVST 129 (133)
T ss_dssp HHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEE
T ss_pred HHHHHHHHHHCCCccccCCccccCCCCCeEEEEEECCCCCEEEEEe
Confidence 4555556677788887652222233355567889999998876654
No 45
>3rjt_A Lipolytic protein G-D-S-L family; PSI-biology, midwest center for structural genomics, MCSG, H; 1.50A {Alicyclobacillus acidocaldarius subsp}
Probab=47.03 E-value=48 Score=25.43 Aligned_cols=61 Identities=10% Similarity=0.130 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCCCcchhhhhhccCCCChHHHHHHHHHHHhcCcEEE
Q 025863 96 KERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIV 165 (247)
Q Consensus 96 ~~~n~~~i~~~i~~Aa~~gadLVVfPE~~l~g~~~~~~~~~~e~~~~~~~~~~~~~~l~~~Ar~~~i~Iv 165 (247)
.++..+.+.++++.+.+.++.+|++--...+ .. ....+.+.+ ..+-+.++++|+++++.++
T Consensus 112 ~~~~~~~l~~~i~~~~~~~~~vil~~p~~~~-~~--~~~~~~~~~------~~~n~~~~~~a~~~~~~~v 172 (216)
T 3rjt_A 112 IDEYRDTLRHLVATTKPRVREMFLLSPFYLE-PN--RSDPMRKTV------DAYIEAMRDVAASEHVPFV 172 (216)
T ss_dssp HHHHHHHHHHHHHHHGGGSSEEEEECCCCCC-CC--TTSHHHHHH------HHHHHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHHHHHHHHhcCCeEEEECCCcCC-CC--cchHHHHHH------HHHHHHHHHHHHHcCCeEE
Confidence 5666777788888777779999888311111 11 111122222 2677888999999998664
No 46
>2o3h_A DNA-(apurinic or apyrimidinic site) lyase; APE, endonuclease; 1.90A {Homo sapiens} PDB: 1bix_A 1dew_A* 1de8_B* 1de9_A* 2o3c_A
Probab=46.34 E-value=43 Score=27.42 Aligned_cols=39 Identities=15% Similarity=0.151 Sum_probs=22.2
Q ss_pred EEEEEecccccCHHHHHHH-HHHHHHHHHHCCCeEEEcCCCCCC
Q 025863 84 KVGLCQLSVTADKERNIAH-ARRAIEEAAEKGAKLILLPEIWNS 126 (247)
Q Consensus 84 kValvQ~~i~~d~~~n~~~-i~~~i~~Aa~~gadLVVfPE~~l~ 126 (247)
.+.++..|+.+. .....+ +.+.++ +.++|||++.|....
T Consensus 28 ~l~v~t~Ni~~~-~~~~~~~i~~~i~---~~~~DIi~LQE~~~~ 67 (285)
T 2o3h_A 28 TLKIASWNVDGL-RAWIKKKGLDWVK---EEAPDILCLQETKCS 67 (285)
T ss_dssp CEEEEEEECSSH-HHHHHTTHHHHHH---HHCCSEEEEECCCCC
T ss_pred ceEEEEEecccC-hhhhhhhHHHHHH---hcCCCEEEEEEeecc
Confidence 344555555432 112222 444443 468999999998764
No 47
>3ayv_A Putative uncharacterized protein TTHB071; structural genomics, riken structural genomics/proteomics in RSGI, TIM barrel, unknown function; 1.85A {Thermus thermophilus} PDB: 3ayt_A
Probab=46.33 E-value=30 Score=28.08 Aligned_cols=64 Identities=17% Similarity=0.184 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCCCcc-hhhhhhccCCCChHHHHHHHHHHHhcCcEEEE
Q 025863 96 KERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFP-VYAEDIDAGGDASPSTAMLSEVARLLKITIVG 166 (247)
Q Consensus 96 ~~~n~~~i~~~i~~Aa~~gadLVVfPE~~l~g~~~~~~~-~~~e~~~~~~~~~~~~~~l~~~Ar~~~i~Iv~ 166 (247)
.++.++.+++.++.|..-|++.|++.= |+...... ...+..+. .-+.+..+.+.|+++|+.+.+
T Consensus 71 r~~~~~~~~~~i~~A~~lGa~~v~~~~----g~~~~~~~~~~~~~~~~---~~~~l~~l~~~a~~~gv~l~l 135 (254)
T 3ayv_A 71 RGLTLRRLLFGLDRAAELGADRAVFHS----GIPHGRTPEEALERALP---LAEALGLVVRRARTLGVRLLL 135 (254)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEEEC----CCCTTCCHHHHHHTHHH---HHHHTHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHHHHHHHHhCCCEEEECC----CCCcccccccHHHHHHH---HHHHHHHHHHHHhhcCCEEEE
Confidence 456678899999999999999887642 22222111 01111110 024556677778888998765
No 48
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=44.99 E-value=66 Score=26.36 Aligned_cols=64 Identities=13% Similarity=-0.010 Sum_probs=40.7
Q ss_pred cCHHHHHHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCCC--cchhhhhhccCCCChHHHHHHHHHHHhcCcEEEEe
Q 025863 94 ADKERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDS--FPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGG 167 (247)
Q Consensus 94 ~d~~~n~~~i~~~i~~Aa~~gadLVVfPE~~l~g~~~~~--~~~~~e~~~~~~~~~~~~~~l~~~Ar~~~i~Iv~G 167 (247)
...++.++.+++.++.|..-|++.|++. +|+.... .....+.. -+.++.+.+.|+++|+.+.+=
T Consensus 77 ~~~~~~~~~~~~~i~~A~~lG~~~v~~~----~g~~~~~~~~~~~~~~~------~~~l~~l~~~a~~~Gv~l~lE 142 (286)
T 3dx5_A 77 ADFEKTIEKCEQLAILANWFKTNKIRTF----AGQKGSADFSQQERQEY------VNRIRMICELFAQHNMYVLLE 142 (286)
T ss_dssp SCHHHHHHHHHHHHHHHHHHTCCEEEEC----SCSSCGGGSCHHHHHHH------HHHHHHHHHHHHHTTCEEEEE
T ss_pred hhHHHHHHHHHHHHHHHHHhCCCEEEEc----CCCCCcccCcHHHHHHH------HHHHHHHHHHHHHhCCEEEEe
Confidence 4567788999999999999999988541 2221110 01111111 256677888888999988653
No 49
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=43.92 E-value=92 Score=25.54 Aligned_cols=63 Identities=13% Similarity=-0.054 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHHHHHCCCeEEEcCCCCCCCC----CC-CCcchhhhhhccCCCChHHHHHHHHHHHhcCcEEEEe
Q 025863 97 ERNIAHARRAIEEAAEKGAKLILLPEIWNSPY----SH-DSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGG 167 (247)
Q Consensus 97 ~~n~~~i~~~i~~Aa~~gadLVVfPE~~l~g~----~~-~~~~~~~e~~~~~~~~~~~~~~l~~~Ar~~~i~Iv~G 167 (247)
++.++.+++.++.|..-|++.|+.+ ..+|+ .. .+..+..+.. -+.++.+.+.|+++|+.+.+=
T Consensus 84 ~~~~~~~~~~i~~a~~lG~~~v~~~--~~~~~~~~~~~~~~~~~~~~~~------~~~l~~l~~~a~~~Gv~l~lE 151 (294)
T 3vni_A 84 KNAKAFYTDLLKRLYKLDVHLIGGA--LYSYWPIDYTKTIDKKGDWERS------VESVREVAKVAEACGVDFCLE 151 (294)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEES--TTSCSSCCTTSCCCHHHHHHHH------HHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHHHHHhCCCeeecc--ccCCCCCcCCCCCCHHHHHHHH------HHHHHHHHHHHHHcCCEEEEE
Confidence 4567888999999999999999632 11122 10 1111111221 256677778888999987653
No 50
>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*
Probab=43.69 E-value=1e+02 Score=25.67 Aligned_cols=66 Identities=12% Similarity=-0.060 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCC---CcchhhhhhccCCCChHHHHHHHHHHHhcCcEEEEe
Q 025863 96 KERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHD---SFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGG 167 (247)
Q Consensus 96 ~~~n~~~i~~~i~~Aa~~gadLVVfPE~~l~g~~~~---~~~~~~e~~~~~~~~~~~~~~l~~~Ar~~~i~Iv~G 167 (247)
.++.++.+++.++.|..-|++.|+.|=....|.... ......+.. -+.++.+.+.|+++|+.+.+=
T Consensus 102 r~~~~~~~~~~i~~A~~lG~~~v~~~~~~~~g~~~~~~~~~~~~~~~~------~~~l~~l~~~a~~~gv~l~lE 170 (309)
T 2hk0_A 102 RAAGKAFFERTLSNVAKLDIHTIGGALHSYWPIDYSQPVDKAGDYARG------VEGINGIADFANDLGINLCIE 170 (309)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEEECTTSCSSCCTTSCCCHHHHHHHH------HHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEeeccccccccCCCcCChHHHHHHH------HHHHHHHHHHHHHcCCEEEEe
Confidence 356678899999999999999988542111122111 111111111 256677778888999988653
No 51
>3bdk_A D-mannonate dehydratase; xylose isomerase-like TIM barrel, lyase; HET: DNO; 2.50A {Streptococcus suis} PDB: 3ban_A* 3dbn_A* 3fvm_A
Probab=43.38 E-value=84 Score=28.16 Aligned_cols=41 Identities=10% Similarity=0.245 Sum_probs=31.4
Q ss_pred eEEEEEecc-c-------ccCHHHHHHHHHHHHHHHHHCCCeEEEcCCC
Q 025863 83 FKVGLCQLS-V-------TADKERNIAHARRAIEEAAEKGAKLILLPEI 123 (247)
Q Consensus 83 ~kValvQ~~-i-------~~d~~~n~~~i~~~i~~Aa~~gadLVVfPE~ 123 (247)
+++..++.. + ..+.++.++.+++.++.|++.|+.+|+...+
T Consensus 78 L~i~~i~s~~~~~~i~~~~~~r~~~ie~~k~~i~~aa~lGi~~v~~nf~ 126 (386)
T 3bdk_A 78 LEITVIESIPVHEDIKQGKPNRDALIENYKTSIRNVGAAGIPVVCYNFM 126 (386)
T ss_dssp CEEEEEECCCCCHHHHTTCTTHHHHHHHHHHHHHHHHTTTCCEEEECCC
T ss_pred CEEEEEeccccccccccCcHHHHHHHHHHHHHHHHHHHcCCCEEEEcCc
Confidence 777776532 1 1457888999999999999999999997444
No 52
>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygen virulence, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A
Probab=42.76 E-value=60 Score=23.65 Aligned_cols=46 Identities=17% Similarity=0.176 Sum_probs=29.6
Q ss_pred HHHHHHHHHhcCcEEEEeeeeeecCCeeEEEEEEEccCCcEEEEEe
Q 025863 150 TAMLSEVARLLKITIVGGSIPERSGDRLYNTCCVFGSDGKLIAKHR 195 (247)
Q Consensus 150 ~~~l~~~Ar~~~i~Iv~Gs~~e~~~~~~yNsa~li~p~G~il~~Y~ 195 (247)
++.+.+.+++.|+.++.+........+..-.+++.+|+|..+..+.
T Consensus 97 l~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdG~~iEl~~ 142 (152)
T 3huh_A 97 INDVVSEILQAGISIVEGPVERTGATGEIMSIYIRDPDGNLIEISQ 142 (152)
T ss_dssp HHHHHHHHHHTTCCCSEEEEEEEETTEEEEEEEEECTTCCEEEEEE
T ss_pred HHHHHHHHHHCCCeEecCCccccCCCCcEEEEEEECCCCCEEEEEe
Confidence 4455556677888877652222233445567789999998877654
No 53
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=41.78 E-value=45 Score=30.16 Aligned_cols=70 Identities=13% Similarity=0.101 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHHHHHHCCCeEEEc----CCCCCCCCCCCCcc-------hhhhhhccCCCChHHHHHHHHHHHhcCcEEE
Q 025863 97 ERNIAHARRAIEEAAEKGAKLILL----PEIWNSPYSHDSFP-------VYAEDIDAGGDASPSTAMLSEVARLLKITIV 165 (247)
Q Consensus 97 ~~n~~~i~~~i~~Aa~~gadLVVf----PE~~l~g~~~~~~~-------~~~e~~~~~~~~~~~~~~l~~~Ar~~~i~Iv 165 (247)
...++.+.++++.|++.|||.|=| |+..++.+. ..+. .+-+.........+.++.|.+.+++.|+.++
T Consensus 40 ~Gsle~A~~li~~Ak~aGAdavKfQ~~k~~tl~s~~~-~~fq~~~~~~~~~ye~~~~~~l~~e~~~~L~~~~~~~Gi~~~ 118 (385)
T 1vli_A 40 DGKLDQAFALIDAAAEAGADAVKFQMFQADRMYQKDP-GLYKTAAGKDVSIFSLVQSMEMPAEWILPLLDYCREKQVIFL 118 (385)
T ss_dssp TTCHHHHHHHHHHHHHHTCSEEEECCBCGGGGTSCCC----------CCCHHHHGGGBSSCGGGHHHHHHHHHHTTCEEE
T ss_pred cccHHHHHHHHHHHHHhCCCEEeeeeeccCcccCcch-hhhccCCCCCccHHHHHHhcCCCHHHHHHHHHHHHHcCCcEE
Confidence 345888999999999999999988 444333332 1111 0001111112245778999999999999987
Q ss_pred Ee
Q 025863 166 GG 167 (247)
Q Consensus 166 ~G 167 (247)
.-
T Consensus 119 st 120 (385)
T 1vli_A 119 ST 120 (385)
T ss_dssp CB
T ss_pred Ec
Confidence 53
No 54
>3ilv_A Glutamine-dependent NAD(+) synthetase; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.79A {Cytophaga hutchinsonii atcc 33406}
Probab=41.08 E-value=25 Score=33.78 Aligned_cols=72 Identities=21% Similarity=0.266 Sum_probs=40.8
Q ss_pred HHHHHHCCCeEEEcCCCCCCCCCCCCcchhhhhhccCCCChHHHHHHHHHHHhcCcEEEEeeeeeec-CCeeEEEEEEEc
Q 025863 107 IEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGSIPERS-GDRLYNTCCVFG 185 (247)
Q Consensus 107 i~~Aa~~gadLVVfPE~~l~g~~~~~~~~~~e~~~~~~~~~~~~~~l~~~Ar~~~i~Iv~Gs~~e~~-~~~~yNsa~li~ 185 (247)
.+.++..|||+++.|=.+.... . .. ......++..|.+++++++.-...-.+ ++..|...-++.
T Consensus 175 ~r~la~~GAdii~~psas~~~~--g-----k~--------~~~~~l~~~rA~e~~~~vv~aN~~G~~~~~~~f~G~S~I~ 239 (634)
T 3ilv_A 175 GIRHYEKGATLVLNPSASHFAF--G-----KS--------AIRYDLVIGGSERFDCTYVYANLLGNEAGRMIYDGEVLIA 239 (634)
T ss_dssp ---CGGGTCSEEEEEECCBCCT--T-----HH--------HHHHHHHHHHHHHTTSEEEEEECEEESSSSCEEECCEEEE
T ss_pred HHHHHHCCCcEEEEecCCcccc--C-----cH--------HHHHHHHHHHHHHhCCEEEEEcCccCCCCceEEcceEEEE
Confidence 3444567999999986653211 0 00 134456777889999999854222122 334454433344
Q ss_pred cCCcEEEE
Q 025863 186 SDGKLIAK 193 (247)
Q Consensus 186 p~G~il~~ 193 (247)
|+|+++..
T Consensus 240 p~G~vla~ 247 (634)
T 3ilv_A 240 HKGKLIQR 247 (634)
T ss_dssp ETTEEEEE
T ss_pred cCCeEEEE
Confidence 99998764
No 55
>2vhh_A CG3027-PA; hydrolase; 2.8A {Drosophila melanogaster} PDB: 2vhi_A
Probab=41.03 E-value=30 Score=31.08 Aligned_cols=44 Identities=14% Similarity=-0.035 Sum_probs=27.9
Q ss_pred HHHHHCCCeEEEcCCCCCCCCCCCCcchhhhhhccCCCChHHHHHHHHHHHhcCcEEEEe
Q 025863 108 EEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGG 167 (247)
Q Consensus 108 ~~Aa~~gadLVVfPE~~l~g~~~~~~~~~~e~~~~~~~~~~~~~~l~~~Ar~~~i~Iv~G 167 (247)
+..+..|||+|+.|=.|.... .. ..+...++.-|.+++++++.-
T Consensus 244 r~la~~GAdill~psa~~~~~--------~~--------~~w~~l~raRAiEn~~~Vv~a 287 (405)
T 2vhh_A 244 MMFGLNGAEIVFNPSATIGRL--------SE--------PLWSIEARNAAIANSYFTVPI 287 (405)
T ss_dssp HHHHHTTCSEEEEEECCBCTT--------TH--------HHHHHHHHHHHHHHTSEEEEE
T ss_pred HHHHHcCCCEEEEcccCCCCC--------CH--------HHHHHHHHHHHHHcCceEEEe
Confidence 334567999999998764211 01 133344666778999999754
No 56
>2j6v_A UV endonuclease, UVDE; plasmid, TIM barrel, DNA repair, DNA binding protein, lyase; HET: KCX ALY; 1.55A {Thermus thermophilus} PDB: 3bzg_A 3c0s_A* 3c0l_A 3c0q_A* 3bzj_A
Probab=40.96 E-value=1.2e+02 Score=25.99 Aligned_cols=64 Identities=17% Similarity=0.147 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCC--CcchhhhhhccCCCChHHHHHHHHHHHhcCcEEEEe
Q 025863 97 ERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHD--SFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGG 167 (247)
Q Consensus 97 ~~n~~~i~~~i~~Aa~~gadLVVfPE~~l~g~~~~--~~~~~~e~~~~~~~~~~~~~~l~~~Ar~~~i~Iv~G 167 (247)
..|++.+.+.++.+.+.|.+++=+.=-.++-|... .|.. .+.. ...++.+++.++++|+.+++.
T Consensus 57 ~~nl~~l~~~l~~~~~~gi~~~ri~s~~f~~ft~~~~~w~~-~~~~------~~~~~~~~~~~~~~gi~i~~H 122 (301)
T 2j6v_A 57 AENLRDLERILRFNADHGFALFRIGQHLIPFASHPLFPYDW-EGAY------EEELARLGALARAFGQRLSMH 122 (301)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEECCGGGSTTTTSTTCCSCH-HHHH------HHHHHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEeccCcccccCCCcccCCc-CCCC------HHHHHHHHHHHHHcCCeEEEe
Confidence 67999999999999999988887743333333221 1111 1111 256778999999999977654
No 57
>1wdu_A TRAS1 ORF2P; four-layered alpha/beta sandwich, RNA binding protein; 2.40A {Bombyx mori} SCOP: d.151.1.1
Probab=40.35 E-value=28 Score=28.06 Aligned_cols=38 Identities=21% Similarity=0.183 Sum_probs=23.2
Q ss_pred EEEEecccccCHHHHHHHHHHHHHHHHHCCCeEEEcCCCCCC
Q 025863 85 VGLCQLSVTADKERNIAHARRAIEEAAEKGAKLILLPEIWNS 126 (247)
Q Consensus 85 ValvQ~~i~~d~~~n~~~i~~~i~~Aa~~gadLVVfPE~~l~ 126 (247)
+-++|.|+..... ..+.+.+. ..+.++|||++.|....
T Consensus 20 lri~s~Nv~~~~~-~~~~l~~~---i~~~~~DIv~lQE~~~~ 57 (245)
T 1wdu_A 20 YRVLQANLQRKKL-ATAELAIE---AATRKAAIALIQEPYVG 57 (245)
T ss_dssp EEEEEEECTTCHH-HHHHHHHH---HHHHTCSEEEEESCCC-
T ss_pred eeeeeeeccccHH-HHHHHHHH---HhhcCCCEEEEEccccc
Confidence 4566777764432 23334444 44568999999998764
No 58
>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0
Probab=39.93 E-value=1.1e+02 Score=22.79 Aligned_cols=69 Identities=10% Similarity=0.111 Sum_probs=42.0
Q ss_pred EEEEEecccc-----cCHHHHHHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCCCcchhhhhhccCCCChHHHHHHHHHHH
Q 025863 84 KVGLCQLSVT-----ADKERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVAR 158 (247)
Q Consensus 84 kValvQ~~i~-----~d~~~n~~~i~~~i~~Aa~~gadLVVfPE~~l~g~~~~~~~~~~e~~~~~~~~~~~~~~l~~~Ar 158 (247)
.+.+++...- .+.++..+.+.++++.+.+.++.+|++-= .++... . . +.. ..+-+.++++|+
T Consensus 68 d~vvi~~G~ND~~~~~~~~~~~~~~~~~i~~~~~~~~~vvl~~~-~~p~~~--~-~---~~~------~~~~~~~~~~a~ 134 (185)
T 3hp4_A 68 THVLIELGANDGLRGFPVKKMQTNLTALVKKSQAANAMTALMEI-YIPPNY--G-P---RYS------KMFTSSFTQISE 134 (185)
T ss_dssp SEEEEECCHHHHHTTCCHHHHHHHHHHHHHHHHHTTCEEEEECC-CCCSTT--C-H---HHH------HHHHHHHHHHHH
T ss_pred CEEEEEeecccCCCCcCHHHHHHHHHHHHHHHHHcCCeEEEEeC-CCCCcc--c-H---HHH------HHHHHHHHHHHH
Confidence 4556665431 35666677777788877777899877621 111110 0 1 111 256678899999
Q ss_pred hcCcEEE
Q 025863 159 LLKITIV 165 (247)
Q Consensus 159 ~~~i~Iv 165 (247)
++++.++
T Consensus 135 ~~~~~~v 141 (185)
T 3hp4_A 135 DTNAHLM 141 (185)
T ss_dssp HHCCEEE
T ss_pred HcCCEEE
Confidence 9998875
No 59
>4f1h_A Tyrosyl-DNA phosphodiesterase 2; hydrolase-DNA complex; HET: DNA; 1.66A {Danio rerio} PDB: 4fpv_A* 4f1h_B*
Probab=39.74 E-value=14 Score=28.70 Aligned_cols=39 Identities=8% Similarity=0.038 Sum_probs=22.7
Q ss_pred ceEEEEEecccc--cCHHHHHHHHHHHHHHHHHCCCeEEEcCCC
Q 025863 82 KFKVGLCQLSVT--ADKERNIAHARRAIEEAAEKGAKLILLPEI 123 (247)
Q Consensus 82 ~~kValvQ~~i~--~d~~~n~~~i~~~i~~Aa~~gadLVVfPE~ 123 (247)
+|||.....+-. .+.....+.+.+.|+ +.++|||+|.|.
T Consensus 3 ~l~v~t~Ni~g~~~~~~~~r~~~i~~~i~---~~~pDIi~LQEv 43 (250)
T 4f1h_A 3 KLSIISWNVDGLDTLNLADRARGLCSYLA---LYTPDVVFLQEL 43 (250)
T ss_dssp CEEEEEEECCTTCCTTHHHHHHHHHHHHH---HHCCSEEEEEEE
T ss_pred eEEEEEEEeCCCCCcCHHHHHHHHHHHHH---HcCCCEEEEEeC
Confidence 455554444311 234444555555554 458999999995
No 60
>2qw5_A Xylose isomerase-like TIM barrel; putative sugar phosphate isomerase/epimerase; 1.78A {Anabaena variabilis atcc 29413}
Probab=38.92 E-value=1.2e+02 Score=25.70 Aligned_cols=68 Identities=13% Similarity=0.128 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCCCcc------h-----hhhhhccCCCChHHHHHHHHHHHhcCcEE
Q 025863 96 KERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFP------V-----YAEDIDAGGDASPSTAMLSEVARLLKITI 164 (247)
Q Consensus 96 ~~~n~~~i~~~i~~Aa~~gadLVVfPE~~l~g~~~~~~~------~-----~~e~~~~~~~~~~~~~~l~~~Ar~~~i~I 164 (247)
.++.++.+++.++.|..-|++.|+.|=.+..|....... . ..+..+. .-+.++.+.+.|+++|+.+
T Consensus 104 r~~~~~~~~~~i~~A~~lG~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~l~~~a~~~Gv~l 180 (335)
T 2qw5_A 104 RQEALEYLKSRVDITAALGGEIMMGPIVIPYGVFPTTDFNEPIWSDELQEHLKVRYAN---AQPILDKLGEYAEIKKVKL 180 (335)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEECCSSCTTCCCBCTTCCBCCHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHTCEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEeccccCccccccCCcccccccccchhhhHHHHHHH---HHHHHHHHHHHHHHcCCEE
Confidence 345678899999999999999996553211121111000 0 1111110 1245667777888899988
Q ss_pred EE
Q 025863 165 VG 166 (247)
Q Consensus 165 v~ 166 (247)
.+
T Consensus 181 ~l 182 (335)
T 2qw5_A 181 AI 182 (335)
T ss_dssp EE
T ss_pred EE
Confidence 76
No 61
>1xla_A D-xylose isomerase; isomerase(intramolecular oxidoreductase); 2.30A {Arthrobacter SP} SCOP: c.1.15.3 PDB: 1die_A* 1did_A 1xlb_A 1xlc_A* 1xld_A* 1xle_A 1xlf_A* 1xlg_A* 1xlh_A 1xli_A* 1xlj_A* 1xlk_A 1xll_A 1xlm_A* 4xia_A* 5xia_A*
Probab=36.78 E-value=98 Score=27.23 Aligned_cols=63 Identities=13% Similarity=0.054 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHHHHHCCCeEEEcCCCCCCCCC---CCCcchhhhhhccCCCChHHHHHHHHHHHhcC--cEEEE
Q 025863 97 ERNIAHARRAIEEAAEKGAKLILLPEIWNSPYS---HDSFPVYAEDIDAGGDASPSTAMLSEVARLLK--ITIVG 166 (247)
Q Consensus 97 ~~n~~~i~~~i~~Aa~~gadLVVfPE~~l~g~~---~~~~~~~~e~~~~~~~~~~~~~~l~~~Ar~~~--i~Iv~ 166 (247)
++.++.+++.++.|..-|++.|++.=.. .|+. ..+.....+.+ -+.++.+.+.|+++| +.+.+
T Consensus 112 ~~~i~~~~~~i~~A~~LGa~~vvv~~G~-~g~~~~~~~~~~~~~~~~------~e~L~~l~~~A~~~G~~v~l~l 179 (394)
T 1xla_A 112 RFALAKVLHNIDLAAEMGAETFVMWGGR-EGSEYDGSKDLAAALDRM------REGVDTAAGYIKDKGYNLRIAL 179 (394)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEECCTT-CEESSGGGCCHHHHHHHH------HHHHHHHHHHHHHHTCCCEEEE
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEECCCC-CccccccccCHHHHHHHH------HHHHHHHHHHHHhcCCCeEEEE
Confidence 5678889999999999999988762111 1110 01111111111 255667777788899 87765
No 62
>1k7c_A Rhamnogalacturonan acetylesterase; N-linked glycosylation, SGNH-hydrolase, hydrolase; HET: NAG MAN; 1.12A {Aspergillus aculeatus} SCOP: c.23.10.4 PDB: 1dex_A* 1deo_A* 1pp4_A* 3c1u_A*
Probab=36.64 E-value=1.1e+02 Score=24.43 Aligned_cols=19 Identities=11% Similarity=0.036 Sum_probs=16.5
Q ss_pred hHHHHHHHHHHHhcCcEEE
Q 025863 147 SPSTAMLSEVARLLKITIV 165 (247)
Q Consensus 147 ~~~~~~l~~~Ar~~~i~Iv 165 (247)
..+.+.++++|+++++.++
T Consensus 149 ~~y~~~~~~vA~~~~v~~i 167 (233)
T 1k7c_A 149 TRFVEYAELAAEVAGVEYV 167 (233)
T ss_dssp CHHHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHHHHHhCCeEE
Confidence 4788899999999999886
No 63
>4gew_A 5'-tyrosyl-DNA phosphodiesterase; 5'-phosphotyrosyl-DNA diesterase, hydrolase; 2.35A {Caenorhabditis elegans} PDB: 4f1i_A
Probab=36.05 E-value=24 Score=31.07 Aligned_cols=41 Identities=10% Similarity=0.261 Sum_probs=24.0
Q ss_pred CceEEEEEeccccc----CHHHHHHHHHHHHHHHHHCCCeEEEcCCCC
Q 025863 81 AKFKVGLCQLSVTA----DKERNIAHARRAIEEAAEKGAKLILLPEIW 124 (247)
Q Consensus 81 ~~~kValvQ~~i~~----d~~~n~~~i~~~i~~Aa~~gadLVVfPE~~ 124 (247)
+..++-++-.|+.+ +..+..+.+.++|+ +.++|||+|.|..
T Consensus 116 ~~~~lkVlSWNI~Gl~~~~~~~R~~~I~~~I~---~~~PDIV~LQEv~ 160 (362)
T 4gew_A 116 KGFEVSVMSWNIDGLDGRSLLTRMKAVAHIVK---NVNPDILFLQEVV 160 (362)
T ss_dssp TTCEEEEEEEECCTTCCTTHHHHHHHHHHHHH---HHCCSEEEEEEEC
T ss_pred CCCeEEEEEEEeCCCCCcCHHHHHHHHHHHHH---HcCCCEEEEEcCC
Confidence 33444455555542 33444444555554 5689999999963
No 64
>1hd7_A DNA-(apurinic or apyrimidinic site) lyase; DNA repair, endonuclease, APE1, HAP1, REF-1; 1.95A {Homo sapiens} SCOP: d.151.1.1 PDB: 1e9n_A 3u8u_A 2isi_A
Probab=34.56 E-value=59 Score=27.45 Aligned_cols=40 Identities=18% Similarity=0.225 Sum_probs=23.4
Q ss_pred eEEEEEecccccCHHHHHHH-HHHHHHHHHHCCCeEEEcCCCCCC
Q 025863 83 FKVGLCQLSVTADKERNIAH-ARRAIEEAAEKGAKLILLPEIWNS 126 (247)
Q Consensus 83 ~kValvQ~~i~~d~~~n~~~-i~~~i~~Aa~~gadLVVfPE~~l~ 126 (247)
..+.++..|+.+.. ....+ +.+++ .+.++|||+|.|....
T Consensus 60 ~~lrv~t~Nv~g~~-~~~~~~i~~~i---~~~~~DIi~LQE~~~~ 100 (318)
T 1hd7_A 60 ATLKICSWNVDGLR-AWIKKKGLDWV---KEEAPDILCLQETKCS 100 (318)
T ss_dssp CCEEEEEEECSSHH-HHHHTTHHHHH---HHHCCSEEEEECCCCC
T ss_pred CceEEEEEecCcch-hhhhhhHHHHH---HhhCCCEEEEEEccCc
Confidence 34556666765321 11222 44444 3568999999998754
No 65
>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens}
Probab=34.52 E-value=1e+02 Score=22.31 Aligned_cols=44 Identities=14% Similarity=0.172 Sum_probs=27.6
Q ss_pred HHHHHHHHHhcCcEEEEeeeeeecCCeeEEEEEEEccCCcEEEE
Q 025863 150 TAMLSEVARLLKITIVGGSIPERSGDRLYNTCCVFGSDGKLIAK 193 (247)
Q Consensus 150 ~~~l~~~Ar~~~i~Iv~Gs~~e~~~~~~yNsa~li~p~G~il~~ 193 (247)
++.+.+.+++.|+.+..+...........-++++.+|+|..+..
T Consensus 101 l~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdGn~iEl 144 (147)
T 3zw5_A 101 LEEMIQHLKACDVPIEEGPVPRTGAKGPIMSIYFRDPDRNLIEV 144 (147)
T ss_dssp HHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEE
T ss_pred HHHHHHHHHHcCCceeeCcccccCCCCceEEEEEECCCCCEEEE
Confidence 45555666788888765522222233444577899999987653
No 66
>4hf7_A Putative acylhydrolase; PF13472 family, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: OSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=33.25 E-value=1.7e+02 Score=22.68 Aligned_cols=65 Identities=17% Similarity=0.189 Sum_probs=36.3
Q ss_pred CHHHHHHHHHHHHHHHHHCCCeEEEcCCCCCCCCC-CCCcchhhhhhccCCCChHHHHHHHHHHHhcCcEEE
Q 025863 95 DKERNIAHARRAIEEAAEKGAKLILLPEIWNSPYS-HDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIV 165 (247)
Q Consensus 95 d~~~n~~~i~~~i~~Aa~~gadLVVfPE~~l~g~~-~~~~~~~~e~~~~~~~~~~~~~~l~~~Ar~~~i~Iv 165 (247)
+.+...+.+.++++.+...++.+|+..=.-...+. ........+.+ ..+-+.++++|+++++.++
T Consensus 99 ~~~~~~~~l~~ii~~~~~~~~~iil~~~~P~~~~~~~~~~~~~~~~i------~~~n~~i~~~a~~~~v~~i 164 (209)
T 4hf7_A 99 NEDYTFGNIASMAELAKANKIKVILTSVLPAAEFPWRREIKDAPQKI------QSLNARIEAYAKANKIPFV 164 (209)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCEEEEECCCCCSCCTTCTTCCCHHHHH------HHHHHHHHHHHHHTTCCEE
T ss_pred cHHHHHHHHHHhhHHHhccCceEEEEeeeccCcccccccccchhHHH------HHHHHHHHHHHHhcCCeEe
Confidence 45566666777777777788998875211111010 01111112222 2556778899999998765
No 67
>1tz9_A Mannonate dehydratase; alpha-beta protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium; 2.90A {Enterococcus faecalis} SCOP: c.1.15.6
Probab=33.06 E-value=2.4e+02 Score=24.32 Aligned_cols=38 Identities=13% Similarity=0.201 Sum_probs=28.7
Q ss_pred eEEEEEeccc--------ccCHHHHHHHHHHHHHHHHHCCCeEEEc
Q 025863 83 FKVGLCQLSV--------TADKERNIAHARRAIEEAAEKGAKLILL 120 (247)
Q Consensus 83 ~kValvQ~~i--------~~d~~~n~~~i~~~i~~Aa~~gadLVVf 120 (247)
+++..++... ....++.++.+++.++.|++.|+++|++
T Consensus 69 L~i~~~~~~~~~~~~~~~~~~r~~~i~~~~~~i~~a~~lG~~~v~~ 114 (367)
T 1tz9_A 69 LALLGIESVAIHDAIKAGTDQRDHYIDNYRQTLRNLGKCGISLVCY 114 (367)
T ss_dssp CEEEEECSCCCCHHHHHTCSTHHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CeEEEEecCCCcHHHhcCCcCHHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 6666655332 1345778889999999999999999998
No 68
>3mil_A Isoamyl acetate-hydrolyzing esterase; SGNH-hydrolase, hydrolase; 1.60A {Saccharomyces cerevisiae}
Probab=32.96 E-value=1e+02 Score=24.05 Aligned_cols=62 Identities=13% Similarity=0.101 Sum_probs=36.3
Q ss_pred CHHHHHHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCCCc------------chhhhhhccCCCChHHHHHHHHHHHhcCc
Q 025863 95 DKERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSF------------PVYAEDIDAGGDASPSTAMLSEVARLLKI 162 (247)
Q Consensus 95 d~~~n~~~i~~~i~~Aa~~gadLVVfPE~~l~g~~~~~~------------~~~~e~~~~~~~~~~~~~~l~~~Ar~~~i 162 (247)
+.++..+.+.++++.+.+.++.+|+.--. ......+ ....+.+ ..+-+.++++|+++++
T Consensus 94 ~~~~~~~~l~~~i~~~~~~~~~vil~~~~---p~~~~~~~~~~~~~~~~~~~~~~~~~------~~~n~~~~~~a~~~~v 164 (240)
T 3mil_A 94 PLPEFIDNIRQMVSLMKSYHIRPIIIGPG---LVDREKWEKEKSEEIALGYFRTNENF------AIYSDALAKLANEEKV 164 (240)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCEEEEECCC---CCCHHHHHHHCHHHHHTTCCCCHHHH------HHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHHHHHcCCeEEEEcCC---CCCchhhhhhccccccccccchHHHH------HHHHHHHHHHHHHhCC
Confidence 45566667777777777778998876421 1110000 0001111 2566788899999998
Q ss_pred EEE
Q 025863 163 TIV 165 (247)
Q Consensus 163 ~Iv 165 (247)
.++
T Consensus 165 ~~v 167 (240)
T 3mil_A 165 PFV 167 (240)
T ss_dssp CEE
T ss_pred eEE
Confidence 775
No 69
>1vyb_A ORF2 contains A reverse transcriptase domain; endonuclease, APE-1 type, retrotransposition, retrotransposon, transferase; 1.8A {Homo sapiens} SCOP: d.151.1.1 PDB: 2v0s_A 2v0r_A
Probab=31.84 E-value=84 Score=24.44 Aligned_cols=39 Identities=8% Similarity=0.128 Sum_probs=21.7
Q ss_pred EEEEeccccc-CHHHHHHHHHHHHHHHHHCCCeEEEcCCCCCC
Q 025863 85 VGLCQLSVTA-DKERNIAHARRAIEEAAEKGAKLILLPEIWNS 126 (247)
Q Consensus 85 ValvQ~~i~~-d~~~n~~~i~~~i~~Aa~~gadLVVfPE~~l~ 126 (247)
+.+++.|+.+ ......+.+.+.++ +.++|||++.|....
T Consensus 8 lri~t~Nv~g~~~~~~~~~~~~~i~---~~~~DIv~LQE~~~~ 47 (238)
T 1vyb_A 8 ITILTLNINGLNSAIKRHRLASWIK---SQDPSVCCIQETHLT 47 (238)
T ss_dssp EEEEEEECSCCCSHHHHHHHHHHHH---HHCCSEEEEECCCCC
T ss_pred ceEEEEecccCCchhhHHHHHHHHH---HcCCCEEEEecccCC
Confidence 3445555542 21112234444444 458999999998653
No 70
>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*
Probab=31.77 E-value=1.3e+02 Score=21.09 Aligned_cols=44 Identities=16% Similarity=0.092 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHh---cCcEEEEeeeeeecCCeeEEEEEEEccCCcEEEEEe
Q 025863 148 PSTAMLSEVARL---LKITIVGGSIPERSGDRLYNTCCVFGSDGKLIAKHR 195 (247)
Q Consensus 148 ~~~~~l~~~Ar~---~~i~Iv~Gs~~e~~~~~~yNsa~li~p~G~il~~Y~ 195 (247)
+-++.+.+.+++ .|+.++.+ +.....+ -.+++.+|+|..+..+.
T Consensus 84 ~dv~~~~~~l~~~~~~G~~~~~~--p~~~~~g--~~~~~~DPdGn~iel~~ 130 (132)
T 3sk2_A 84 EDVDKLFNEWTKQKSHQIIVIKE--PYTDVFG--RTFLISDPDGHIIRVCP 130 (132)
T ss_dssp HHHHHHHHHHHHCSSSCCEEEEE--EEEETTE--EEEEEECTTCCEEEEEE
T ss_pred HHHHHHHHHHHhhhcCCCEEeeC--CcccCce--EEEEEECCCCCEEEEEe
Confidence 345566666677 89988765 2323333 45788999999877654
No 71
>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp}
Probab=31.69 E-value=1.3e+02 Score=21.01 Aligned_cols=47 Identities=15% Similarity=0.097 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHhcCcEEEEeeeeee-cC-CeeEEEEEEEccCCcEEEEEe
Q 025863 148 PSTAMLSEVARLLKITIVGGSIPER-SG-DRLYNTCCVFGSDGKLIAKHR 195 (247)
Q Consensus 148 ~~~~~l~~~Ar~~~i~Iv~Gs~~e~-~~-~~~yNsa~li~p~G~il~~Y~ 195 (247)
+-++.+.+.+++.|+.++.+. ..+ .+ ....-++++.+|+|..+..+.
T Consensus 79 ~d~~~~~~~l~~~G~~~~~~p-~~~~~~~~~~~~~~~~~DPdGn~iel~~ 127 (135)
T 3rri_A 79 KHFDNLYKLAKQRGIPFYHDL-SRRFEGLIEEHETFFLIDPSNNLLEFKY 127 (135)
T ss_dssp HHHHHHHHHHHHTTCCEEEEE-EEESTTSTTCEEEEEEECTTCCEEEEEE
T ss_pred HhHHHHHHHHHHcCCceecCc-ccccCCCCCceEEEEEECCCCCEEEEEE
Confidence 456667777788899887762 222 22 223347788999998876654
No 72
>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}
Probab=30.85 E-value=1.4e+02 Score=21.21 Aligned_cols=43 Identities=21% Similarity=0.160 Sum_probs=27.7
Q ss_pred HHHHHHHHHHhcCcEEEEeeeeeecCCeeEEEEEEEccCCcEEEEEe
Q 025863 149 STAMLSEVARLLKITIVGGSIPERSGDRLYNTCCVFGSDGKLIAKHR 195 (247)
Q Consensus 149 ~~~~l~~~Ar~~~i~Iv~Gs~~e~~~~~~yNsa~li~p~G~il~~Y~ 195 (247)
-++.+.+.+++.|+.++.+ +...... + .+++.+|+|..+..+.
T Consensus 108 d~~~~~~~l~~~G~~~~~~--~~~~~~g-~-~~~~~DPdG~~iel~~ 150 (156)
T 3kol_A 108 LFDRAVTVIGENKIAIAHG--PVTRPTG-R-GVYFYDPDGFMIEIRC 150 (156)
T ss_dssp GHHHHHHHHHHTTCCEEEE--EEEC-CC-E-EEEEECTTSCEEEEEE
T ss_pred HHHHHHHHHHHCCCccccC--ceecCCc-c-EEEEECCCCCEEEEEe
Confidence 3455666667888888765 2222222 2 7789999999877654
No 73
>2zds_A Putative DNA-binding protein; TIM-barrel fold, structural genomics, NPPSFA; 2.30A {Streptomyces coelicolor}
Probab=30.56 E-value=83 Score=26.43 Aligned_cols=67 Identities=9% Similarity=0.002 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHHHHCCCeEEEcCCCCCC-----CCCCCCcchhhhhhccCCCChHHHHHHHHHHHhcCcEEEE
Q 025863 97 ERNIAHARRAIEEAAEKGAKLILLPEIWNS-----PYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVG 166 (247)
Q Consensus 97 ~~n~~~i~~~i~~Aa~~gadLVVfPE~~l~-----g~~~~~~~~~~e~~~~~~~~~~~~~~l~~~Ar~~~i~Iv~ 166 (247)
++.++.+++.++.|..-|++.|++.=.... ++.........+.... .-+.++.+.+.|+++|+.+.+
T Consensus 107 ~~~~~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~l~~~a~~~Gv~l~l 178 (340)
T 2zds_A 107 QRAAAEIKDTARAAARLGVDTVIGFTGSAIWHLVAMFPPAPESMIERGYQD---FADRWNPILDVFDAEGVRFAH 178 (340)
T ss_dssp HHHHHHHHHHHHHHHHHTCSEEEECCCCSSGGGTTCCSCCCHHHHHHHHHH---HHHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEecCCcCcccccccCCCcccchHHHHHH---HHHHHHHHHHHHHHcCCEEEE
Confidence 456788888999998889998876421110 0110000001111110 124566777788889998765
No 74
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=30.24 E-value=63 Score=26.44 Aligned_cols=66 Identities=14% Similarity=0.073 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHHHHHHCCCeEEEcCCCCCCCC---CCC-CcchhhhhhccCCCChHHHHHHHHHHHhcCcEEEEe
Q 025863 96 KERNIAHARRAIEEAAEKGAKLILLPEIWNSPY---SHD-SFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGG 167 (247)
Q Consensus 96 ~~~n~~~i~~~i~~Aa~~gadLVVfPE~~l~g~---~~~-~~~~~~e~~~~~~~~~~~~~~l~~~Ar~~~i~Iv~G 167 (247)
.++.++.+++.++.|..-|++.|+.|=....|. ... ......+.. -+.++.+.+.|+++|+.+.+=
T Consensus 83 r~~~~~~~~~~i~~a~~lG~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~------~~~l~~l~~~a~~~gv~l~lE 152 (290)
T 2qul_A 83 RDAGTEYVKRLLDDCHLLGAPVFAGLTFCAWPQSPPLDMKDKRPYVDRA------IESVRRVIKVAEDYGIIYALE 152 (290)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSEEEEEEEEESSCCCCTTCCCCHHHHHHH------HHHHHTTHHHHHHHTCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEeeccccCCcccCCCcccHHHHHHHH------HHHHHHHHHHHHHcCCEEEEE
Confidence 345678899999999889999988531000122 111 111111111 245666777888889887653
No 75
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=30.03 E-value=1.3e+02 Score=21.94 Aligned_cols=105 Identities=14% Similarity=0.193 Sum_probs=51.3
Q ss_pred EEEEEeccc-c-cC-HHHHHHHHHHHHHHHHH----CCCeEEEcCCCCCCCCCCCCcchhhhhhccCCCChH----HHHH
Q 025863 84 KVGLCQLSV-T-AD-KERNIAHARRAIEEAAE----KGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASP----STAM 152 (247)
Q Consensus 84 kValvQ~~i-~-~d-~~~n~~~i~~~i~~Aa~----~gadLVVfPE~~l~g~~~~~~~~~~e~~~~~~~~~~----~~~~ 152 (247)
|+.++-+-. + .+ +...+..+.++.++..+ .++.+|...-- -..+......+........-+ ..+.
T Consensus 24 k~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d----~~~d~~~~~~~~~~~~~~~~~~l~~~~d~ 99 (164)
T 2ggt_A 24 QWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISID----PERDTKEAIANYVKEFSPKLVGLTGTREE 99 (164)
T ss_dssp CEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESC----TTTCCHHHHHHHHHTTCSSCEEEECCHHH
T ss_pred CEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeC----CCCCCHHHHHHHHHHcCCCeEEEeCCHHH
Confidence 345555542 2 66 88888888887777655 36666554210 000111111110000000000 0244
Q ss_pred HHHHHHhcCcEEEEeeeeeecCCeeE-----EEEEEEccCCcEEEEEe
Q 025863 153 LSEVARLLKITIVGGSIPERSGDRLY-----NTCCVFGSDGKLIAKHR 195 (247)
Q Consensus 153 l~~~Ar~~~i~Iv~Gs~~e~~~~~~y-----Nsa~li~p~G~il~~Y~ 195 (247)
..++++.+++..+-. . ...+.-| ++.++++++|+++..|.
T Consensus 100 ~~~~~~~~~v~~~p~--~-~~~~~~~~~~~~~~~~lid~~G~i~~~~~ 144 (164)
T 2ggt_A 100 VDQVARAYRVYYSPG--P-KDEDEDYIVDHTIIMYLIGPDGEFLDYFG 144 (164)
T ss_dssp HHHHHHTTTCCEEEE--E-ECTTSCEEEEECCEEEEECTTSCEEEEEE
T ss_pred HHHHHHhcCeEEEec--C-CCCCCCeeEeccceEEEECCCCeEEEEeC
Confidence 566777888754432 1 1122222 26899999999987664
No 76
>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}
Probab=29.66 E-value=1.5e+02 Score=21.72 Aligned_cols=41 Identities=22% Similarity=0.160 Sum_probs=26.4
Q ss_pred HHHHHHHHhcCcEEEEeeeeeecCCeeEEEEEEEccCCcEEEEEe
Q 025863 151 AMLSEVARLLKITIVGGSIPERSGDRLYNTCCVFGSDGKLIAKHR 195 (247)
Q Consensus 151 ~~l~~~Ar~~~i~Iv~Gs~~e~~~~~~yNsa~li~p~G~il~~Y~ 195 (247)
+...+.+++.|+.++.. +...++. -.+++-+|+|+.+..+.
T Consensus 110 da~~~~l~~~Gv~~~~~--p~~~~~g--~~~~f~DPdGn~iel~q 150 (155)
T 4g6x_A 110 AAEYERLSALGVRFTQE--PTDMGPV--VTAILDDTCGNLIQLMQ 150 (155)
T ss_dssp HHHHHHHHHTTCCEEEE--EEECSSC--EEEEEECSSSCEEEEEE
T ss_pred hhhhhHHhcCCcEEeeC--CEEcCCe--EEEEEECCCCCEEEEEE
Confidence 34445556788888765 3333333 24678899999887764
No 77
>3teb_A Endonuclease/exonuclease/phosphatase; PSI-biology, MCSG, midwest center for structural genomics; 2.99A {Leptotrichia buccalis c-1013-b}
Probab=28.89 E-value=71 Score=25.43 Aligned_cols=41 Identities=20% Similarity=0.227 Sum_probs=25.6
Q ss_pred ceEEEEEecccc--cCHHHHHHHHHHHHHHHHHCCCeEEEcCCCCC
Q 025863 82 KFKVGLCQLSVT--ADKERNIAHARRAIEEAAEKGAKLILLPEIWN 125 (247)
Q Consensus 82 ~~kValvQ~~i~--~d~~~n~~~i~~~i~~Aa~~gadLVVfPE~~l 125 (247)
+|||+.....-. .+....++++.+.+++ .++|||+|.|...
T Consensus 3 ~l~v~t~Ni~~~~~~~~~~~~~~i~~~i~~---~~~DIi~LQEv~~ 45 (266)
T 3teb_A 3 AMKILTVNVHAWLEENQMEKIDILARTIAE---KQYDVIAMQEVNQ 45 (266)
T ss_dssp CEEEEEEECCTTCSTTHHHHHHHHHHHHHH---HTCSEEEEEEEEE
T ss_pred ceEEEEEecccccCcchhHHHHHHHHHHHh---cCCCEEEEEEccc
Confidence 356555544322 3445556666666653 5899999999854
No 78
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=28.72 E-value=60 Score=28.08 Aligned_cols=21 Identities=10% Similarity=0.218 Sum_probs=18.3
Q ss_pred EEEEEEccCCcEEEEEecccc
Q 025863 179 NTCCVFGSDGKLIAKHRKIHL 199 (247)
Q Consensus 179 Nsa~li~p~G~il~~Y~K~hL 199 (247)
=+.|+|+++|.|...|+|+..
T Consensus 103 r~tfiId~~G~i~~~~~~v~~ 123 (322)
T 4eo3_A 103 RSTFLIDRWGFVRKEWRRVKV 123 (322)
T ss_dssp CEEEEECTTSBEEEEEESCCS
T ss_pred cEEEEECCCCEEEEEEeCCCc
Confidence 367999999999999999875
No 79
>1ivn_A Thioesterase I; hydrolase, protease; 1.90A {Escherichia coli} SCOP: c.23.10.5 PDB: 1u8u_A* 1j00_A* 1jrl_A 1v2g_A*
Probab=28.48 E-value=1.7e+02 Score=21.94 Aligned_cols=69 Identities=10% Similarity=0.163 Sum_probs=41.6
Q ss_pred EEEEEecccc-----cCHHHHHHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCCCcchhhhhhccCCCChHHHHHHHHHHH
Q 025863 84 KVGLCQLSVT-----ADKERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVAR 158 (247)
Q Consensus 84 kValvQ~~i~-----~d~~~n~~~i~~~i~~Aa~~gadLVVfPE~~l~g~~~~~~~~~~e~~~~~~~~~~~~~~l~~~Ar 158 (247)
.+.++++..- .+.++..+.+.++++.+.+.++.+|+.--. .+.. +. .+.. ..+-+.++++|+
T Consensus 64 d~Vii~~G~ND~~~~~~~~~~~~~l~~li~~~~~~~~~vil~~~~-~p~~----~~--~~~~------~~~n~~~~~~a~ 130 (190)
T 1ivn_A 64 RWVLVELGGNDGLRGFQPQQTEQTLRQILQDVKAANAEPLLMQIR-LPAN----YG--RRYN------EAFSAIYPKLAK 130 (190)
T ss_dssp SEEEEECCTTTTSSSCCHHHHHHHHHHHHHHHHHTTCEEEEECCC-CCGG----GC--HHHH------HHHHHHHHHHHH
T ss_pred CEEEEEeeccccccCCCHHHHHHHHHHHHHHHHHcCCCEEEEecc-CCcc----hh--HHHH------HHHHHHHHHHHH
Confidence 4556665432 256666777777777777778998876321 1110 00 0111 256677889999
Q ss_pred hcCcEEE
Q 025863 159 LLKITIV 165 (247)
Q Consensus 159 ~~~i~Iv 165 (247)
++++.++
T Consensus 131 ~~~v~~i 137 (190)
T 1ivn_A 131 EFDVPLL 137 (190)
T ss_dssp HTTCCEE
T ss_pred HcCCeEE
Confidence 9998775
No 80
>4gz1_A Tyrosyl-DNA phosphodiesterase 2; protein-DNA complex, DNA repair, 5'-DNA END processing, endonuclease/exonuclease/phosphatase domain; HET: DNA EPE; 1.50A {Mus musculus} PDB: 4gyz_A* 4gz0_A* 4gz2_A*
Probab=27.99 E-value=34 Score=26.95 Aligned_cols=39 Identities=5% Similarity=0.059 Sum_probs=22.1
Q ss_pred ceEEEEEecccc--cCHHHHHHHHHHHHHHHHHCCCeEEEcCCC
Q 025863 82 KFKVGLCQLSVT--ADKERNIAHARRAIEEAAEKGAKLILLPEI 123 (247)
Q Consensus 82 ~~kValvQ~~i~--~d~~~n~~~i~~~i~~Aa~~gadLVVfPE~ 123 (247)
+|||.....+-. .+..+..+.+.+.|+ +.++|||+|.|.
T Consensus 9 ~l~v~swNi~g~~~~~~~~r~~~i~~~i~---~~~pDIi~LQEv 49 (256)
T 4gz1_A 9 TISFITWNIDGLDGCNLPERARGVCSCLA---LYSPDVVFLQEV 49 (256)
T ss_dssp EEEEEEEECCTTCCTTHHHHHHHHHHHHH---HHCCSEEEEEEE
T ss_pred cEEEEEEEcCCCcCcCHHHHHHHHHHHHH---HcCCCEEEEEcC
Confidence 355544444311 234444455555554 458999999995
No 81
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=27.72 E-value=26 Score=27.16 Aligned_cols=28 Identities=4% Similarity=-0.029 Sum_probs=20.8
Q ss_pred cCHHHHHHHHHHHHHHHHHCCCeEEEcC
Q 025863 94 ADKERNIAHARRAIEEAAEKGAKLILLP 121 (247)
Q Consensus 94 ~d~~~n~~~i~~~i~~Aa~~gadLVVfP 121 (247)
..+...+..+.++.++-.+.++++|...
T Consensus 65 ~~C~~el~~l~~l~~~~~~~~~~vv~Vs 92 (179)
T 3ixr_A 65 PGSSTEGLEFNLLLPQFEQINATVLGVS 92 (179)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTEEEEEEE
T ss_pred CchHHHHHHHHHHHHHHHHCCCEEEEEc
Confidence 4566777888888887777788887663
No 82
>3mpr_A Putative endonuclease/exonuclease/phosphatase FAM protein; structural genomics, PSI-2, protein structure initiative; HET: MSE PEG; 1.90A {Bacteroides thetaiotaomicron}
Probab=27.00 E-value=98 Score=25.64 Aligned_cols=23 Identities=4% Similarity=-0.088 Sum_probs=15.4
Q ss_pred HHHHHHHHHHHCCCeEEEcCCCC
Q 025863 102 HARRAIEEAAEKGAKLILLPEIW 124 (247)
Q Consensus 102 ~i~~~i~~Aa~~gadLVVfPE~~ 124 (247)
+...+++...+.++|||+|.|..
T Consensus 31 r~~~i~~~i~~~~~DIv~LQEv~ 53 (298)
T 3mpr_A 31 RYPVIAQMVQYHDFDIFGTQECF 53 (298)
T ss_dssp HHHHHHHHHHHTTCSEEEEESBC
T ss_pred HHHHHHHHHHHcCCCEEEEeCCC
Confidence 33444444445699999999974
No 83
>3gfo_A Cobalt import ATP-binding protein CBIO 1; structural genomics, cell membrane, cobalt transport, hydrolase, ION transport; 2.30A {Clostridium perfringens atcc 13124}
Probab=26.97 E-value=1.8e+02 Score=24.39 Aligned_cols=73 Identities=19% Similarity=0.173 Sum_probs=41.4
Q ss_pred HHHHHHCCCeEEEcCCCCCCCCCCCCcchhhhhhccCCCChHHHHHHHHHHHhcCcEEEEeeeeeecCCeeEEEEEEEcc
Q 025863 107 IEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGSIPERSGDRLYNTCCVFGS 186 (247)
Q Consensus 107 i~~Aa~~gadLVVfPE~~l~g~~~~~~~~~~e~~~~~~~~~~~~~~l~~~Ar~~~i~Iv~Gs~~e~~~~~~yNsa~li~p 186 (247)
+..|...+++++++=|=+.. . +.... ..+.+.+.++.++.|.++++-+.....-..+.+..+++.
T Consensus 154 iAraL~~~P~lLlLDEPts~-L-----D~~~~--------~~i~~~l~~l~~~~g~tvi~vtHdl~~~~~~~drv~~l~- 218 (275)
T 3gfo_A 154 IAGVLVMEPKVLILDEPTAG-L-----DPMGV--------SEIMKLLVEMQKELGITIIIATHDIDIVPLYCDNVFVMK- 218 (275)
T ss_dssp HHHHHTTCCSEEEEECTTTT-C-----CHHHH--------HHHHHHHHHHHHHHCCEEEEEESCCSSGGGGCSEEEEEE-
T ss_pred HHHHHHcCCCEEEEECcccc-C-----CHHHH--------HHHHHHHHHHHhhCCCEEEEEecCHHHHHHhCCEEEEEE-
Confidence 34444568999999885431 1 11111 256677888874447777765432222223455667774
Q ss_pred CCcEEEEE
Q 025863 187 DGKLIAKH 194 (247)
Q Consensus 187 ~G~il~~Y 194 (247)
+|+++..-
T Consensus 219 ~G~i~~~g 226 (275)
T 3gfo_A 219 EGRVILQG 226 (275)
T ss_dssp TTEEEEEE
T ss_pred CCEEEEEC
Confidence 79887543
No 84
>1g6h_A High-affinity branched-chain amino acid transport ATP-binding protein; beta-core domain; HET: ADP; 1.60A {Methanocaldococcus jannaschii} SCOP: c.37.1.12 PDB: 1gaj_A 1g9x_A*
Probab=26.11 E-value=2.3e+02 Score=23.18 Aligned_cols=70 Identities=17% Similarity=0.038 Sum_probs=40.5
Q ss_pred HHHHHHCCCeEEEcCCCCCCCCCCCCcchhhhhhccCCCChHHHHHHHHHHHhcCcEEEEeeeeeecCCeeEEEEEEEcc
Q 025863 107 IEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGSIPERSGDRLYNTCCVFGS 186 (247)
Q Consensus 107 i~~Aa~~gadLVVfPE~~l~g~~~~~~~~~~e~~~~~~~~~~~~~~l~~~Ar~~~i~Iv~Gs~~e~~~~~~yNsa~li~p 186 (247)
+..|...+++++++=|-+.. . +.... ....+.+.+++++ +.++++-+.....-..+.+..+++.
T Consensus 164 iAraL~~~p~lllLDEPts~-L-----D~~~~--------~~l~~~l~~l~~~-g~tvi~vtHd~~~~~~~~d~v~~l~- 227 (257)
T 1g6h_A 164 IGRALMTNPKMIVMDEPIAG-V-----APGLA--------HDIFNHVLELKAK-GITFLIIEHRLDIVLNYIDHLYVMF- 227 (257)
T ss_dssp HHHHHHTCCSEEEEESTTTT-C-----CHHHH--------HHHHHHHHHHHHT-TCEEEEECSCCSTTGGGCSEEEEEE-
T ss_pred HHHHHHcCCCEEEEeCCccC-C-----CHHHH--------HHHHHHHHHHHHC-CCEEEEEecCHHHHHHhCCEEEEEE-
Confidence 34455678999999995432 2 11111 2566777777655 7777665432222234556667774
Q ss_pred CCcEEE
Q 025863 187 DGKLIA 192 (247)
Q Consensus 187 ~G~il~ 192 (247)
+|+++.
T Consensus 228 ~G~i~~ 233 (257)
T 1g6h_A 228 NGQIIA 233 (257)
T ss_dssp TTEEEE
T ss_pred CCEEEE
Confidence 788764
No 85
>3qxb_A Putative xylose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 1.90A {Rhodospirillum rubrum}
Probab=26.09 E-value=62 Score=27.21 Aligned_cols=66 Identities=17% Similarity=-0.011 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHHHHHCCCeEEEcCCCCCC-CCCCCCcchhhhhhccCCCChHHHHHHHHHHHhcCcE-EEE
Q 025863 97 ERNIAHARRAIEEAAEKGAKLILLPEIWNS-PYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKIT-IVG 166 (247)
Q Consensus 97 ~~n~~~i~~~i~~Aa~~gadLVVfPE~~l~-g~~~~~~~~~~e~~~~~~~~~~~~~~l~~~Ar~~~i~-Iv~ 166 (247)
++.++.+++.++.|+.-|++.|+.|=.... +.. .......+..+. .-+.+..+.+.|+++|+. +.+
T Consensus 110 ~~~~~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~-~~~~~~~~~~~~---~~~~l~~l~~~a~~~Gv~~l~l 177 (316)
T 3qxb_A 110 SLGYQHLKRAIDMTAAMEVPATGMPFGSYSAADA-LNPARREEIYAI---ARDMWIELAAYAKRQGLSMLYV 177 (316)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEECCBBCCHHHH-TCHHHHHHHHHH---HHHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEecCCCcCcccc-CCcccHHHHHHH---HHHHHHHHHHHHHhcCCeEEEE
Confidence 456788899999999999999987643211 000 000011111110 125566777788899998 754
No 86
>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}
Probab=26.09 E-value=1.9e+02 Score=21.05 Aligned_cols=42 Identities=19% Similarity=0.192 Sum_probs=27.8
Q ss_pred HHHHHHHHHhcCcEEEEeeeeeecCCeeEEEEEEEccCCcEEEEEe
Q 025863 150 TAMLSEVARLLKITIVGGSIPERSGDRLYNTCCVFGSDGKLIAKHR 195 (247)
Q Consensus 150 ~~~l~~~Ar~~~i~Iv~Gs~~e~~~~~~yNsa~li~p~G~il~~Y~ 195 (247)
++.+.+.+++.|+.++.+ +.....+ -.+++.+|+|..+..+.
T Consensus 76 ~d~~~~~l~~~G~~v~~~--p~~~~~G--~~~~~~DPdG~~iel~~ 117 (144)
T 3r6a_A 76 LDKFKTFLEENGAEIIRG--PSKVPTG--RNMTVRHSDGSVIEYVE 117 (144)
T ss_dssp HHHHHHHHHHTTCEEEEE--EEEETTE--EEEEEECTTSCEEEEEE
T ss_pred HHHHHHHHHHcCCEEecC--CccCCCc--eEEEEECCCCCEEEEEE
Confidence 445566667889988765 2222333 24688999999887765
No 87
>3tui_C Methionine import ATP-binding protein METN; ABC-transporter, type I ABC type importer, methionine uptake transporter, membrane protein; HET: ADP; 2.90A {Escherichia coli} PDB: 3tuj_C 3tuz_C* 3dhw_C
Probab=25.36 E-value=83 Score=28.00 Aligned_cols=70 Identities=19% Similarity=0.242 Sum_probs=41.0
Q ss_pred HHHHCCCeEEEcCCCCCCCCCCCCcchhhhhhccCCCChHHHHHHHHHHHhcCcEEEEeeeeeecCCeeEEEEEEEccCC
Q 025863 109 EAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGSIPERSGDRLYNTCCVFGSDG 188 (247)
Q Consensus 109 ~Aa~~gadLVVfPE~~l~g~~~~~~~~~~e~~~~~~~~~~~~~~l~~~Ar~~~i~Iv~Gs~~e~~~~~~yNsa~li~p~G 188 (247)
.|...+++++++=|-+.. . +.... ..+.+.++++.++.|+++++-+.....-..+.+..+++. +|
T Consensus 176 rAL~~~P~lLLlDEPTs~-L-----D~~~~--------~~i~~lL~~l~~~~g~Tii~vTHdl~~~~~~aDrv~vl~-~G 240 (366)
T 3tui_C 176 RALASNPKVLLCDQATSA-L-----DPATT--------RSILELLKDINRRLGLTILLITHEMDVVKRICDCVAVIS-NG 240 (366)
T ss_dssp HHTTTCCSEEEEESTTTT-S-----CHHHH--------HHHHHHHHHHHHHSCCEEEEEESCHHHHHHHCSEEEEEE-TT
T ss_pred HHHhcCCCEEEEECCCcc-C-----CHHHH--------HHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEE-CC
Confidence 333457888888885431 1 11111 367788888888889888875432222123445566774 78
Q ss_pred cEEEE
Q 025863 189 KLIAK 193 (247)
Q Consensus 189 ~il~~ 193 (247)
+++..
T Consensus 241 ~iv~~ 245 (366)
T 3tui_C 241 ELIEQ 245 (366)
T ss_dssp EEEEC
T ss_pred EEEEE
Confidence 87654
No 88
>2q0q_A ARYL esterase; SGNH hydrolase, oligomeric enzyme, acyl transfer, ARYL ester hydrolase; 1.50A {Mycobacterium smegmatis} PDB: 2q0s_A*
Probab=25.27 E-value=1.9e+02 Score=21.95 Aligned_cols=73 Identities=10% Similarity=0.174 Sum_probs=41.6
Q ss_pred EEEEEecccc-------cCHHHHHHHHHHHHHHHHHCC---------CeEEEcCCCCCCCCCCCCcchh-------hhhh
Q 025863 84 KVGLCQLSVT-------ADKERNIAHARRAIEEAAEKG---------AKLILLPEIWNSPYSHDSFPVY-------AEDI 140 (247)
Q Consensus 84 kValvQ~~i~-------~d~~~n~~~i~~~i~~Aa~~g---------adLVVfPE~~l~g~~~~~~~~~-------~e~~ 140 (247)
.+.++++..- .+.++..+.+.++++.+.+.+ +.+|+. ..+.........+ .+..
T Consensus 85 d~vvi~~G~ND~~~~~~~~~~~~~~~l~~li~~~~~~~~~~~~~~P~~~iil~---~~p~~~~~~~~~~~~~~~~~~~~~ 161 (216)
T 2q0q_A 85 DLVIIMLGTNDTKAYFRRTPLDIALGMSVLVTQVLTSAGGVGTTYPAPKVLVV---SPPPLAPMPHPWFQLIFEGGEQKT 161 (216)
T ss_dssp SEEEEECCTGGGSGGGCCCHHHHHHHHHHHHHHHHTCTTTTTBCCCCCEEEEE---ECCCCCCCCSHHHHHHTTTHHHHH
T ss_pred CEEEEEecCcccchhcCCCHHHHHHHHHHHHHHHHHhcccccccCCCCeEEEE---eCCCcCcccCCcchhhhccHHHHH
Confidence 5566666431 245666777778888777766 788776 1111111000011 1111
Q ss_pred ccCCCChHHHHHHHHHHHhcCcEEE
Q 025863 141 DAGGDASPSTAMLSEVARLLKITIV 165 (247)
Q Consensus 141 ~~~~~~~~~~~~l~~~Ar~~~i~Iv 165 (247)
..+-+.++++|+++++.++
T Consensus 162 ------~~~n~~~~~~a~~~~v~~i 180 (216)
T 2q0q_A 162 ------TELARVYSALASFMKVPFF 180 (216)
T ss_dssp ------TTHHHHHHHHHHHHTCCEE
T ss_pred ------HHHHHHHHHHHHHcCCcEE
Confidence 2566788899999998765
No 89
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=25.26 E-value=2.6e+02 Score=22.30 Aligned_cols=37 Identities=8% Similarity=0.172 Sum_probs=22.6
Q ss_pred CCCCCceEEEEEecccccCHHHHHHHHHHHHHHHHHCCCeEEE
Q 025863 77 TPPVAKFKVGLCQLSVTADKERNIAHARRAIEEAAEKGAKLIL 119 (247)
Q Consensus 77 ~~~~~~~kValvQ~~i~~d~~~n~~~i~~~i~~Aa~~gadLVV 119 (247)
.....+||+++........ .+.+.++.+++.|.|-|=
T Consensus 12 ~~~~~~~klg~~~~~~~~~------~~~~~l~~~~~~G~~~vE 48 (257)
T 3lmz_A 12 PKAVNPFHLGMAGYTFVNF------DLDTTLKTLERLDIHYLC 48 (257)
T ss_dssp CCCCCSSEEEECGGGGTTS------CHHHHHHHHHHTTCCEEE
T ss_pred ccCCCceEEEEEEEeecCC------CHHHHHHHHHHhCCCEEE
Confidence 3344568999866655431 345566666677877663
No 90
>2o14_A Hypothetical protein YXIM; NESG, X-RAY, SR595, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacillus subtilis} SCOP: b.18.1.32 c.23.10.8
Probab=24.99 E-value=1.9e+02 Score=25.30 Aligned_cols=75 Identities=17% Similarity=0.109 Sum_probs=43.7
Q ss_pred EEEEEecccc-------cCHHHHHHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCCCcchhhhhhccCCCChHHHHHHHHH
Q 025863 84 KVGLCQLSVT-------ADKERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEV 156 (247)
Q Consensus 84 kValvQ~~i~-------~d~~~n~~~i~~~i~~Aa~~gadLVVfPE~~l~g~~~~~~~~~~e~~~~~~~~~~~~~~l~~~ 156 (247)
.+.++++..- .+.++..+.++++++++.+.++.+|+.-= ... ...+... .... .....+.+.++++
T Consensus 232 d~VvI~~G~ND~~~~~~~~~~~~~~~l~~ii~~lr~~~a~vilvtP--~~~--~~~~~~~-~~~~--~~~~~~~~~i~~l 304 (375)
T 2o14_A 232 DYFMLQLGINDTNPKHKESEAEFKEVMRDMIRQVKAKGADVILSTP--QGR--ATDFTSE-GIHS--SVNRWYRASILAL 304 (375)
T ss_dssp CEEEEECCTGGGCGGGCCCHHHHHHHHHHHHHHHHTTTCEEEEECC--CCC--TTCBCTT-SCBC--CTTSTTHHHHHHH
T ss_pred CEEEEEEEccCCCccCCCCHHHHHHHHHHHHHHHHHCCCEEEEECC--CCc--ccccCcc-cchh--HHHHHHHHHHHHH
Confidence 5677777542 14666677788888888777888887631 111 1101100 0000 0123566778899
Q ss_pred HHhcCcEEE
Q 025863 157 ARLLKITIV 165 (247)
Q Consensus 157 Ar~~~i~Iv 165 (247)
|+++++.++
T Consensus 305 A~~~~v~~i 313 (375)
T 2o14_A 305 AEEEKTYLI 313 (375)
T ss_dssp HHHTTCEEE
T ss_pred HHHcCCeEE
Confidence 999998775
No 91
>2eja_A URO-D, UPD, uroporphyrinogen decarboxylase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 1.90A {Aquifex aeolicus}
Probab=24.64 E-value=68 Score=27.64 Aligned_cols=53 Identities=17% Similarity=0.278 Sum_probs=31.1
Q ss_pred HHHHHHHHCCCeEEEcCCCCCCCCCCCCcchhhhhhccCCCChHHHHHHHHHHHhc-CcEEEE
Q 025863 105 RAIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLL-KITIVG 166 (247)
Q Consensus 105 ~~i~~Aa~~gadLVVfPE~~l~g~~~~~~~~~~e~~~~~~~~~~~~~~l~~~Ar~~-~i~Iv~ 166 (247)
++++...+.|+|.|.+.+.|.+-... ..+.+.. -++.+++.+..++. ++.++.
T Consensus 183 ~~~~~~~~aGad~i~i~d~~~~~lsp---~~f~ef~------~p~~k~i~~~i~~~~g~~~i~ 236 (338)
T 2eja_A 183 AYLKEQIKAGADVVQIFDSWVNNLSL---EDYGEYV------YPYVNYLISELKDFSDTPVIY 236 (338)
T ss_dssp HHHHHHHHTTCSEEEEEETTGGGSCH---HHHHHHT------HHHHHHHHHHHHHHCCCCEEE
T ss_pred HHHHHHHHhCCCEEEEecCccccCCH---HHHHHHh------HHHHHHHHHHHhhcCCCCEEE
Confidence 33344446799999988876542222 2233332 26677777777665 665543
No 92
>4hc5_A Glyoxalase/bleomycin resistance protein/dioxygena; MCSG, GEBA genomes, structural genomics, midwest center for structural genomics; HET: MSE GOL; 1.45A {Sphaerobacter thermophilus}
Probab=24.43 E-value=1.3e+02 Score=20.72 Aligned_cols=43 Identities=7% Similarity=-0.109 Sum_probs=26.5
Q ss_pred HHHHHHHHHhcCcEEEEeeeeeecCCeeEEEEEEEccCCcEEEEEe
Q 025863 150 TAMLSEVARLLKITIVGGSIPERSGDRLYNTCCVFGSDGKLIAKHR 195 (247)
Q Consensus 150 ~~~l~~~Ar~~~i~Iv~Gs~~e~~~~~~yNsa~li~p~G~il~~Y~ 195 (247)
++.+.+.+++.|+.++.+ ......+. -.+++.+|+|..+..+.
T Consensus 90 ~~~~~~~l~~~G~~~~~~-~~~~~~g~--~~~~~~DP~G~~~el~e 132 (133)
T 4hc5_A 90 IDEAYKTLTERGVTFTKP-PEMMPWGQ--RATWFSDPDGNQFFLVE 132 (133)
T ss_dssp HHHHHHHHHHTTCEESSS-CEECTTSC--EEEEEECTTCEEEEEEE
T ss_pred HHHHHHHHHHCCCEeecC-CCcCCCCC--EEEEEECCCCCEEEEEe
Confidence 444555566778877643 22222232 56788999998876654
No 93
>3dmy_A Protein FDRA; predicted actyl-COA synthetase, nysgrc, PSI-II, STRU genomics, protein structure initiative; 2.07A {Escherichia coli}
Probab=24.37 E-value=1.1e+02 Score=28.44 Aligned_cols=47 Identities=13% Similarity=0.141 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCCCcchhhhhhccCCCChHHHHHHHHHHHhcCcEEEEe
Q 025863 100 IAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGG 167 (247)
Q Consensus 100 ~~~i~~~i~~Aa~~gadLVVfPE~~l~g~~~~~~~~~~e~~~~~~~~~~~~~~l~~~Ar~~~i~Iv~G 167 (247)
.+...+.+++|.+.|+.+||+.|.+- . ...+++.+.|+++|+.+++.
T Consensus 46 a~~v~~~v~e~~~~Gv~~viis~Gf~------------~---------~~~~~l~~~A~~~g~rliGP 92 (480)
T 3dmy_A 46 GEYAAELANQALDRNLNVMMFSDNVT------------L---------EDEIQLKTRAREKGLLVMGP 92 (480)
T ss_dssp HHHHHHHHHHHHHTTCEEEECCCCCC------------H---------HHHHHHHHHHHHTTCCEECS
T ss_pred HHHHHHHHHHHHhcCCCEEEECCCCC------------H---------HHHHHHHHHHHHcCCEEEec
Confidence 45667788888889999888877542 0 33467889999999988653
No 94
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=23.61 E-value=1.8e+02 Score=24.68 Aligned_cols=45 Identities=22% Similarity=0.344 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHCCCe-EEEcCCCCCCCCCCCCcchhhhhhccCCCChHHHHHHHHHHHhcCcEEEE
Q 025863 101 AHARRAIEEAAEKGAK-LILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVG 166 (247)
Q Consensus 101 ~~i~~~i~~Aa~~gad-LVVfPE~~l~g~~~~~~~~~~e~~~~~~~~~~~~~~l~~~Ar~~~i~Iv~ 166 (247)
+...+.+++|.+.|+. +|++.+.+ . + .-.+.+.+.|+++++.+++
T Consensus 81 ~~~~~~v~ea~~~Gi~~vVi~t~G~----~--------~---------~~~~~l~~~A~~~gi~viG 126 (294)
T 2yv1_A 81 PFAKDAVFEAIDAGIELIVVITEHI----P--------V---------HDTMEFVNYAEDVGVKIIG 126 (294)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCSCC----C--------H---------HHHHHHHHHHHHHTCEEEC
T ss_pred HHHHHHHHHHHHCCCCEEEEECCCC----C--------H---------HHHHHHHHHHHHcCCEEEc
Confidence 4566777788888999 66666643 1 1 2245688899999997653
No 95
>1muw_A Xylose isomerase; atomic resolution, disorder; 0.86A {Streptomyces olivochromogenes} SCOP: c.1.15.3 PDB: 1s5m_A* 1s5n_A* 2gyi_A* 1xyb_A* 1xyc_A* 1xya_A* 1xyl_A 1xym_A* 1dxi_A 3gnx_A* 1gw9_A* 1xib_A 1xic_A* 1xid_A* 1xie_A* 1xif_A* 1xig_A* 1xih_A* 1xii_A* 1xij_A ...
Probab=23.60 E-value=2.1e+02 Score=24.95 Aligned_cols=64 Identities=17% Similarity=0.093 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHHHHHHCCCeEEEcCCCCCCCCC---CCCcchhhhhhccCCCChHHHHHHHHHHHhcC--cEEEE
Q 025863 96 KERNIAHARRAIEEAAEKGAKLILLPEIWNSPYS---HDSFPVYAEDIDAGGDASPSTAMLSEVARLLK--ITIVG 166 (247)
Q Consensus 96 ~~~n~~~i~~~i~~Aa~~gadLVVfPE~~l~g~~---~~~~~~~~e~~~~~~~~~~~~~~l~~~Ar~~~--i~Iv~ 166 (247)
.++.++.+++.++.|..-|++.|++.=.. .++. ..+.....+.+ -+.++.+.+.|+++| +.+.+
T Consensus 111 r~~~i~~~~~~i~~A~~LGa~~vvv~~g~-~~~~~~~~~~~~~~~~~~------~e~L~~l~~~A~~~G~~v~l~l 179 (386)
T 1muw_A 111 RRYALRKTIRNIDLAVELGAKTYVAWGGR-EGAESGAAKDVRVALDRM------KEAFDLLGEYVTSQGYDIRFAI 179 (386)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSEEEECCTT-CEESSTTSCCHHHHHHHH------HHHHHHHHHHHHHHTCCCEEEE
T ss_pred HHHHHHHHHHHHHHHHHhCCCEEEECCCC-CcccccccCCHHHHHHHH------HHHHHHHHHHHHhcCCCeEEEE
Confidence 35677889999999998899887753111 1111 01111111111 255667777788888 87765
No 96
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=22.42 E-value=80 Score=28.07 Aligned_cols=70 Identities=10% Similarity=0.058 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHHHHHCCCe-----EEEcC----CCCCCC-CCCCCcchhhhhhccCCCChHHHHHHHHHHHhcCcEEEEe
Q 025863 98 RNIAHARRAIEEAAEKGAK-----LILLP----EIWNSP-YSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGG 167 (247)
Q Consensus 98 ~n~~~i~~~i~~Aa~~gad-----LVVfP----E~~l~g-~~~~~~~~~~e~~~~~~~~~~~~~~l~~~Ar~~~i~Iv~G 167 (247)
..+++.+++|+.|++.|+| -|=|. |..... |...+...+.+.........+..+.|.+.+++.|+.++.-
T Consensus 18 Gdle~Ak~lI~~A~~aGad~~~d~avKfQt~~~d~l~~~~~~~~~~~~~~~~~~~~el~~e~~~~L~~~~~~~Gi~~~st 97 (350)
T 3g8r_A 18 GNVEHGVALIRAIRESCQGFDFDFGFKLQYRNLDTFIHSSFKGRDDVKYVKRFEETRLQPEQMQKLVAEMKANGFKAICT 97 (350)
T ss_dssp TCSHHHHHHHHHHHHHTTTCCSEEEEEEEECCHHHHBCGGGTTCCSSSSHHHHHHTCCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred CcHHHHHHHHHHHHHhCCcccCCeeEEccccchhhhcChhccCccHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCcEEec
Confidence 4578889999998877776 77775 211111 1000000111111111124578899999999999999754
No 97
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=22.36 E-value=1e+02 Score=26.00 Aligned_cols=47 Identities=2% Similarity=-0.098 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHCCCeEEEcCCCCCCCCCCCCcchhhhhhccCCCChHHHHHHHHHHHhcCcEEEE
Q 025863 101 AHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVG 166 (247)
Q Consensus 101 ~~i~~~i~~Aa~~gadLVVfPE~~l~g~~~~~~~~~~e~~~~~~~~~~~~~~l~~~Ar~~~i~Iv~ 166 (247)
+.+.+.+.++.+.|.|+|+.-..++. + .+..++|.++|++.|..+.+
T Consensus 71 ~av~e~~~~iL~aG~dvv~~S~gaLa-----------d--------~~l~~~L~~aA~~gg~~l~v 117 (253)
T 1j5p_A 71 EAVKEYSLQILKNPVNYIIISTSAFA-----------D--------EVFRERFFSELKNSPARVFF 117 (253)
T ss_dssp HHHHHHHHHHTTSSSEEEECCGGGGG-----------S--------HHHHHHHHHHHHTCSCEEEC
T ss_pred HHHHHHHHHHHHCCCCEEEcChhhhc-----------C--------HHHHHHHHHHHHHCCCeEEe
Confidence 35666677777889999999876652 1 26678899999999888754
No 98
>3tif_A Uncharacterized ABC transporter ATP-binding prote; nucleotide-binding domain, ABC transporter ATPase; HET: ADP; 1.80A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID} PDB: 1l2t_A* 1f3o_A*
Probab=22.32 E-value=2e+02 Score=23.27 Aligned_cols=73 Identities=14% Similarity=0.071 Sum_probs=42.7
Q ss_pred HHHHHHCCCeEEEcCCCCCCCCCCCCcchhhhhhccCCCChHHHHHHHHHHHhcCcEEEEeeeeeecCCeeEEEEEEEcc
Q 025863 107 IEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGSIPERSGDRLYNTCCVFGS 186 (247)
Q Consensus 107 i~~Aa~~gadLVVfPE~~l~g~~~~~~~~~~e~~~~~~~~~~~~~~l~~~Ar~~~i~Iv~Gs~~e~~~~~~yNsa~li~p 186 (247)
+..|...+++++++=|-+.. . +.... ....+.+.++.++.+.++++-+..... -.+.+..+++.
T Consensus 156 iAral~~~p~llllDEPts~-L-----D~~~~--------~~i~~~l~~l~~~~g~tvi~vtHd~~~-~~~~d~i~~l~- 219 (235)
T 3tif_A 156 IARALANNPPIILADQPTWA-L-----DSKTG--------EKIMQLLKKLNEEDGKTVVVVTHDINV-ARFGERIIYLK- 219 (235)
T ss_dssp HHHHHTTCCSEEEEESTTTT-S-----CHHHH--------HHHHHHHHHHHHHHCCEEEEECSCHHH-HTTSSEEEEEE-
T ss_pred HHHHHHcCCCEEEEeCCccc-C-----CHHHH--------HHHHHHHHHHHHHcCCEEEEEcCCHHH-HHhCCEEEEEE-
Confidence 34455568899999885432 1 11111 266777888877767777665432212 13455666774
Q ss_pred CCcEEEEEe
Q 025863 187 DGKLIAKHR 195 (247)
Q Consensus 187 ~G~il~~Y~ 195 (247)
+|+++....
T Consensus 220 ~G~i~~~~~ 228 (235)
T 3tif_A 220 DGEVEREEK 228 (235)
T ss_dssp TTEEEEEEE
T ss_pred CCEEEEEcC
Confidence 788765433
No 99
>4gym_A Glyoxalase/bleomycin resistance protein/dioxygena; PSI-biology, midwest center for structural genomics, MCSG, oxidoreductase; HET: MSE; 1.56A {Conexibacter woesei}
Probab=21.94 E-value=1.8e+02 Score=20.89 Aligned_cols=43 Identities=16% Similarity=0.058 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHhcCcEEEEeeeeeecCCeeEEEEEEEccCCcEEEEE
Q 025863 148 PSTAMLSEVARLLKITIVGGSIPERSGDRLYNTCCVFGSDGKLIAKH 194 (247)
Q Consensus 148 ~~~~~l~~~Ar~~~i~Iv~Gs~~e~~~~~~yNsa~li~p~G~il~~Y 194 (247)
+-++.+.+.+++.++.++.+ +...++ +-++++.+|+|..+...
T Consensus 89 ~~vd~~~~~~~~~g~~~~~~--p~~~~~--~~~~~f~DPDGn~iEi~ 131 (149)
T 4gym_A 89 DDVDRFADTALGAGGTVARD--PMDYGF--MYGRSFHDLDGHLWEVM 131 (149)
T ss_dssp HHHHHHHHHHHHTTCEECSC--CEECSS--EEEEEEECTTCCEEEEE
T ss_pred HHHHHHHHHHHhcCceeecc--ccccCC--EEEEEEEcCCCCEEEEE
Confidence 44556666677888877644 332232 34678899999887654
No 100
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=21.87 E-value=1.8e+02 Score=24.54 Aligned_cols=58 Identities=17% Similarity=0.238 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHHHHCCCeEE-EcCCCCCCCCCCCCcchhhhhhccCCCChHHHHHHHHHHHhcCcEEEEeeeeee
Q 025863 99 NIAHARRAIEEAAEKGAKLI-LLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGSIPER 172 (247)
Q Consensus 99 n~~~i~~~i~~Aa~~gadLV-VfPE~~l~g~~~~~~~~~~e~~~~~~~~~~~~~~l~~~Ar~~~i~Iv~Gs~~e~ 172 (247)
+.+...++.+.|.+.|+|-+ +.|=++.... .+ ....+.++++|...++.+++-.+|.+
T Consensus 75 ~t~~ai~la~~A~~~Gadavlv~~P~y~~~~--------s~--------~~l~~~f~~va~a~~lPiilYn~P~~ 133 (286)
T 2r91_A 75 NADEAIALAKYAESRGAEAVASLPPYYFPRL--------SE--------RQIAKYFRDLCSAVSIPVFLYNYPAA 133 (286)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECCSCSSTTC--------CH--------HHHHHHHHHHHHHCSSCEEEEECHHH
T ss_pred CHHHHHHHHHHHHhcCCCEEEEcCCcCCCCC--------CH--------HHHHHHHHHHHHhcCCCEEEEeChhh
Confidence 35666778888888899954 4444432100 11 36788899999888888887545543
No 101
>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A
Probab=21.56 E-value=2e+02 Score=19.73 Aligned_cols=45 Identities=16% Similarity=-0.034 Sum_probs=27.7
Q ss_pred HHHHHHHHHhcCcEEEEeeeeeecCCeeEEEEEEEccCCcEEEEEec
Q 025863 150 TAMLSEVARLLKITIVGGSIPERSGDRLYNTCCVFGSDGKLIAKHRK 196 (247)
Q Consensus 150 ~~~l~~~Ar~~~i~Iv~Gs~~e~~~~~~yNsa~li~p~G~il~~Y~K 196 (247)
++.+.+.+++.|+.++.. +........-.+++.+|+|..+..+..
T Consensus 82 ~~~~~~~l~~~G~~~~~~--~~~~~~g~~~~~~~~DPdG~~iel~~~ 126 (135)
T 1f9z_A 82 AAEACEKIRQNGGNVTRE--AGPVKGGTTVIAFVEDPDGYKIELIEE 126 (135)
T ss_dssp HHHHHHHHHHTTCEEEEE--EEECTTSCCEEEEEECTTSCEEEEEEC
T ss_pred HHHHHHHHHHCCCEEecC--CccCCCCceeEEEEECCCCCEEEEEec
Confidence 344555667788888754 222222222346788999998877654
No 102
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=21.54 E-value=1.7e+02 Score=24.89 Aligned_cols=56 Identities=21% Similarity=0.277 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHHHCCCeEE-EcCCCCCCCCCCCCcchhhhhhccCCCChHHHHHHHHHHHhcCcEEEEeeeee
Q 025863 99 NIAHARRAIEEAAEKGAKLI-LLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGSIPE 171 (247)
Q Consensus 99 n~~~i~~~i~~Aa~~gadLV-VfPE~~l~g~~~~~~~~~~e~~~~~~~~~~~~~~l~~~Ar~~~i~Iv~Gs~~e 171 (247)
+.+...++.+.|.+.|+|-+ +.|=++..+ .+ ....+.++++|...++.+++-.+|.
T Consensus 96 st~~ai~la~~A~~~Gadavlv~~P~y~~~---------~~--------~~l~~~f~~ia~a~~lPiilYn~P~ 152 (304)
T 3cpr_A 96 NTRTSVELAEAAASAGADGLLVVTPYYSKP---------SQ--------EGLLAHFGAIAAATEVPICLYDIPG 152 (304)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCCSSCC---------CH--------HHHHHHHHHHHHHCCSCEEEEECHH
T ss_pred CHHHHHHHHHHHHhcCCCEEEECCCCCCCC---------CH--------HHHHHHHHHHHHhcCCCEEEEeCcc
Confidence 45667778888888898853 444443311 01 2677888888888888887654443
No 103
>3g91_A MTH0212, exodeoxyribonuclease; double-strand specific 3'-5' exonuclease, AP endonuclease; HET: PG4; 1.23A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fzi_A 3g0a_A 3g1k_A 3g2c_A 3g3c_A* 3g3y_A* 3g4t_A* 3g00_A 3g0r_A* 3g2d_A* 3g38_A 3g8v_A* 3ga6_A
Probab=21.17 E-value=1.2e+02 Score=24.47 Aligned_cols=18 Identities=22% Similarity=0.189 Sum_probs=13.3
Q ss_pred HHHHHCCCeEEEcCCCCC
Q 025863 108 EEAAEKGAKLILLPEIWN 125 (247)
Q Consensus 108 ~~Aa~~gadLVVfPE~~l 125 (247)
+...+.++|||++.|...
T Consensus 24 ~~i~~~~~DIv~LQEt~~ 41 (265)
T 3g91_A 24 KWFMEEKPDILCLQEIKA 41 (265)
T ss_dssp HHHHHHCCSEEEEECCCS
T ss_pred HHHHhcCCCEEEEEeccc
Confidence 333456899999999854
No 104
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=20.98 E-value=1.8e+02 Score=24.50 Aligned_cols=55 Identities=20% Similarity=0.290 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHHHCCCeEE-EcCCCCCCCCCCCCcchhhhhhccCCCChHHHHHHHHHHHhcCcEEEEeeee
Q 025863 99 NIAHARRAIEEAAEKGAKLI-LLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGSIP 170 (247)
Q Consensus 99 n~~~i~~~i~~Aa~~gadLV-VfPE~~l~g~~~~~~~~~~e~~~~~~~~~~~~~~l~~~Ar~~~i~Iv~Gs~~ 170 (247)
+.+...++.+.|.+.|+|-| +.|=++..+ .+ ....+.++++|...++.+++-.+|
T Consensus 80 ~t~~ai~la~~A~~~Gadavlv~~P~y~~~---------s~--------~~l~~~f~~ia~a~~lPiilYn~P 135 (292)
T 2vc6_A 80 STAEAIAFVRHAQNAGADGVLIVSPYYNKP---------TQ--------EGIYQHFKAIDAASTIPIIVYNIP 135 (292)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEECCCSSCC---------CH--------HHHHHHHHHHHHHCSSCEEEEECH
T ss_pred cHHHHHHHHHHHHHcCCCEEEEcCCCCCCC---------CH--------HHHHHHHHHHHHhCCCCEEEEeCc
Confidence 35667778888888898854 444443321 01 267778888888878888764344
No 105
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=20.94 E-value=1.7e+02 Score=24.93 Aligned_cols=56 Identities=16% Similarity=0.274 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHHHCCCeEE-EcCCCCCCCCCCCCcchhhhhhccCCCChHHHHHHHHHHHhcCcEEEEeeeee
Q 025863 99 NIAHARRAIEEAAEKGAKLI-LLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGSIPE 171 (247)
Q Consensus 99 n~~~i~~~i~~Aa~~gadLV-VfPE~~l~g~~~~~~~~~~e~~~~~~~~~~~~~~l~~~Ar~~~i~Iv~Gs~~e 171 (247)
+.+...++.+.|.+.|+|-+ +.|=++..+ .+ ....+.++++|...++.+++-.+|.
T Consensus 92 ~t~~ai~la~~A~~~Gadavlv~~P~y~~~---------s~--------~~l~~~f~~va~a~~lPiilYn~P~ 148 (301)
T 1xky_A 92 NTHASIDLTKKATEVGVDAVMLVAPYYNKP---------SQ--------EGMYQHFKAIAESTPLPVMLYNVPG 148 (301)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCCSSCC---------CH--------HHHHHHHHHHHHTCSSCEEEEECHH
T ss_pred CHHHHHHHHHHHHhcCCCEEEEcCCCCCCC---------CH--------HHHHHHHHHHHHhcCCCEEEEeCcc
Confidence 35667778888888899854 444443211 11 2677888888888888887644443
No 106
>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila}
Probab=20.90 E-value=2.5e+02 Score=20.44 Aligned_cols=44 Identities=11% Similarity=-0.009 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHhcCcEEEEeeeeeecCCeeEEEEEEEccCCcEEEEEe
Q 025863 148 PSTAMLSEVARLLKITIVGGSIPERSGDRLYNTCCVFGSDGKLIAKHR 195 (247)
Q Consensus 148 ~~~~~l~~~Ar~~~i~Iv~Gs~~e~~~~~~yNsa~li~p~G~il~~Y~ 195 (247)
+-++.+.+.+++.|+.++.+ +.....+ -.+++.+|+|..+..+.
T Consensus 79 ~dvd~~~~~l~~~G~~i~~~--p~~~~~G--~~~~~~DPdG~~iel~~ 122 (148)
T 3rhe_A 79 EMVDEIHRQWSDKEISIIQP--PTQMDFG--YTFVGVDPDEHRLRIFC 122 (148)
T ss_dssp HHHHHHHHHHHHTTCCEEEE--EEEETTE--EEEEEECTTCCEEEEEE
T ss_pred HHHHHHHHHHHhCCCEEEeC--CeecCCC--cEEEEECCCCCEEEEEE
Confidence 34566666677889988765 2222323 45788899998877654
No 107
>2ihy_A ABC transporter, ATP-binding protein; ATPase, ABC cassette, hydrolase; HET: MSE; 1.90A {Staphylococcus aureus}
Probab=20.82 E-value=2.6e+02 Score=23.35 Aligned_cols=71 Identities=14% Similarity=0.110 Sum_probs=39.6
Q ss_pred HHHHHHCCCeEEEcCCCCCCCCCCCCcchhhhhhccCCCChHHHHHHHHHHHhcCcEE--EEeeeeeecCCeeEEEEEEE
Q 025863 107 IEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITI--VGGSIPERSGDRLYNTCCVF 184 (247)
Q Consensus 107 i~~Aa~~gadLVVfPE~~l~g~~~~~~~~~~e~~~~~~~~~~~~~~l~~~Ar~~~i~I--v~Gs~~e~~~~~~yNsa~li 184 (247)
+..|...+++++++=|-+.. . +.... ....+.+.+++++ +.++ ++-+.....-..+.+..+++
T Consensus 172 lAraL~~~p~lLlLDEPts~-L-----D~~~~--------~~l~~~l~~l~~~-g~tv~~iivtHd~~~~~~~~d~v~~l 236 (279)
T 2ihy_A 172 IARALMGQPQVLILDEPAAG-L-----DFIAR--------ESLLSILDSLSDS-YPTLAMIYVTHFIEEITANFSKILLL 236 (279)
T ss_dssp HHHHHHTCCSEEEEESTTTT-C-----CHHHH--------HHHHHHHHHHHHH-CTTCEEEEEESCGGGCCTTCCEEEEE
T ss_pred HHHHHhCCCCEEEEeCCccc-c-----CHHHH--------HHHHHHHHHHHHC-CCEEEEEEEecCHHHHHHhCCEEEEE
Confidence 34455678999999995432 1 11111 2566677777666 5444 44333222223455667777
Q ss_pred ccCCcEEEE
Q 025863 185 GSDGKLIAK 193 (247)
Q Consensus 185 ~p~G~il~~ 193 (247)
. +|+++..
T Consensus 237 ~-~G~i~~~ 244 (279)
T 2ihy_A 237 K-DGQSIQQ 244 (279)
T ss_dssp E-TTEEEEE
T ss_pred E-CCEEEEE
Confidence 4 7887643
No 108
>2inf_A URO-D, UPD, uroporphyrinogen decarboxylase; (alpha-beta)8 barrel, eight parallel beta strands surrounded by eight alpha helices, lyase; 2.30A {Bacillus subtilis}
Probab=20.54 E-value=1.1e+02 Score=26.55 Aligned_cols=52 Identities=15% Similarity=0.200 Sum_probs=30.2
Q ss_pred HHHHHHHHCCCeEEEcCCCCCCCCCCCCcchhhhhhccCCCChHHHHHHHHHHHhcCcEEE
Q 025863 105 RAIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIV 165 (247)
Q Consensus 105 ~~i~~Aa~~gadLVVfPE~~l~g~~~~~~~~~~e~~~~~~~~~~~~~~l~~~Ar~~~i~Iv 165 (247)
++++...+.|+|.|-+.+.|.+ +. +...+.+.. -++..++.+..++.++.++
T Consensus 197 ~~~~~~~~aGad~i~i~D~~~~-~l--sp~~f~ef~------~p~~~~i~~~i~~~g~~~i 248 (359)
T 2inf_A 197 VYVKAQIKAGAKAIQIFDSWVG-AL--NQADYRTYI------KPVMNRIFSELAKENVPLI 248 (359)
T ss_dssp HHHHHHHHTTCSEEEEECTTGG-GS--CHHHHHHHT------HHHHHHHHHHHGGGCSCEE
T ss_pred HHHHHHHHhCCCEEEEeCCccc-cC--CHHHHHHHh------HHHHHHHHHHHHHcCCcEE
Confidence 3334444679999999998654 21 112333332 2666777777766665543
No 109
>4g1u_C Hemin import ATP-binding protein HMUV; membrane transporter, type II ABC importer, HMUT, plasma MEM transport protein-hydrolase complex; 3.01A {Yersinia pestis}
Probab=20.33 E-value=1.7e+02 Score=24.38 Aligned_cols=67 Identities=13% Similarity=0.177 Sum_probs=39.5
Q ss_pred CCeEEEcCCCCCCCCCCCCcchhhhhhccCCCChHHHHHHHHHHHhcCcEEEEeeeeeecCCeeEEEEEEEccCCcEEEE
Q 025863 114 GAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGSIPERSGDRLYNTCCVFGSDGKLIAK 193 (247)
Q Consensus 114 gadLVVfPE~~l~g~~~~~~~~~~e~~~~~~~~~~~~~~l~~~Ar~~~i~Iv~Gs~~e~~~~~~yNsa~li~p~G~il~~ 193 (247)
+++++++=|=+.. . +.... ....+.++++.++.++++++-+.....-..+.+..+++. +|+++..
T Consensus 165 ~p~lLllDEPts~-L-----D~~~~--------~~i~~~l~~l~~~~~~tvi~vtHdl~~~~~~~d~v~vl~-~G~i~~~ 229 (266)
T 4g1u_C 165 TPRWLFLDEPTSA-L-----DLYHQ--------QHTLRLLRQLTRQEPLAVCCVLHDLNLAALYADRIMLLA-QGKLVAC 229 (266)
T ss_dssp CCEEEEECCCCSS-C-----CHHHH--------HHHHHHHHHHHHHSSEEEEEECSCHHHHHHHCSEEEEEE-TTEEEEE
T ss_pred CCCEEEEeCcccc-C-----CHHHH--------HHHHHHHHHHHHcCCCEEEEEEcCHHHHHHhCCEEEEEE-CCEEEEE
Confidence 8999999995431 1 11111 266778888887777666654332222123445566774 7987654
Q ss_pred Ee
Q 025863 194 HR 195 (247)
Q Consensus 194 Y~ 195 (247)
-.
T Consensus 230 g~ 231 (266)
T 4g1u_C 230 GT 231 (266)
T ss_dssp EC
T ss_pred cC
Confidence 33
No 110
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=20.32 E-value=2e+02 Score=24.68 Aligned_cols=51 Identities=10% Similarity=0.124 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHHCCCeEE-EcCCCCCCCCCCCCcchhhhhhccCCCChHHHHHHHHHHHhcCcEEEE
Q 025863 99 NIAHARRAIEEAAEKGAKLI-LLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVG 166 (247)
Q Consensus 99 n~~~i~~~i~~Aa~~gadLV-VfPE~~l~g~~~~~~~~~~e~~~~~~~~~~~~~~l~~~Ar~~~i~Iv~ 166 (247)
+.+...++.+.|.+.|+|-| +.|=++..+ .+ ....+.++++|...++.+++
T Consensus 91 st~~ai~la~~A~~~Gadavlv~~P~y~~~---------s~--------~~l~~~f~~va~a~~lPiil 142 (314)
T 3d0c_A 91 SVDTAIELGKSAIDSGADCVMIHQPVHPYI---------TD--------AGAVEYYRNIIEALDAPSII 142 (314)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECCCCCSCC---------CH--------HHHHHHHHHHHHHSSSCEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCCCCC---------CH--------HHHHHHHHHHHHhCCCCEEE
Confidence 35566778888888899964 444433211 11 26788899999888888765
No 111
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=20.17 E-value=1.5e+02 Score=23.83 Aligned_cols=57 Identities=11% Similarity=0.087 Sum_probs=35.7
Q ss_pred eEEEEEecccccCHHHHHHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCCCcchhhhhhccCCCChHHHHHHHHHHHhcCc
Q 025863 83 FKVGLCQLSVTADKERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKI 162 (247)
Q Consensus 83 ~kValvQ~~i~~d~~~n~~~i~~~i~~Aa~~gadLVVfPE~~l~g~~~~~~~~~~e~~~~~~~~~~~~~~l~~~Ar~~~i 162 (247)
+++..+...... ..+.+++.++.|..-|++.|+++- |. +..+.+.+.|+++|+
T Consensus 77 l~i~~~~~~~~~----~~~~~~~~i~~A~~lGa~~v~~~~----~~-------------------~~~~~l~~~a~~~gv 129 (262)
T 3p6l_A 77 IKIVGTGVYVAE----KSSDWEKMFKFAKAMDLEFITCEP----AL-------------------SDWDLVEKLSKQYNI 129 (262)
T ss_dssp CEEEEEEEECCS----STTHHHHHHHHHHHTTCSEEEECC----CG-------------------GGHHHHHHHHHHHTC
T ss_pred CeEEEEeccCCc----cHHHHHHHHHHHHHcCCCEEEecC----CH-------------------HHHHHHHHHHHHhCC
Confidence 555555443221 244577888888889999988862 10 123456777788888
Q ss_pred EEEE
Q 025863 163 TIVG 166 (247)
Q Consensus 163 ~Iv~ 166 (247)
.+.+
T Consensus 130 ~l~~ 133 (262)
T 3p6l_A 130 KISV 133 (262)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7654
No 112
>2yz2_A Putative ABC transporter ATP-binding protein TM_0; cobalt transport, TM02 hydrolase, inner membrane, membrane, nucleotide-binding; 2.30A {Thermotoga maritima}
Probab=20.16 E-value=3e+02 Score=22.62 Aligned_cols=72 Identities=14% Similarity=0.075 Sum_probs=41.3
Q ss_pred HHHHHHHCCCeEEEcCCCCCCCCCCCCcchhhhhhccCCCChHHHHHHHHHHHhcCcEEEEeeeeeecCCeeEEEEEEEc
Q 025863 106 AIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGSIPERSGDRLYNTCCVFG 185 (247)
Q Consensus 106 ~i~~Aa~~gadLVVfPE~~l~g~~~~~~~~~~e~~~~~~~~~~~~~~l~~~Ar~~~i~Iv~Gs~~e~~~~~~yNsa~li~ 185 (247)
.+..|...+++++++=|-+.. . +.... ....+.+.++.++ +.++++-+.....-..+.+..+++.
T Consensus 148 ~lAraL~~~p~lllLDEPts~-L-----D~~~~--------~~l~~~l~~l~~~-g~tii~vtHd~~~~~~~~d~v~~l~ 212 (266)
T 2yz2_A 148 AIASVIVHEPDILILDEPLVG-L-----DREGK--------TDLLRIVEKWKTL-GKTVILISHDIETVINHVDRVVVLE 212 (266)
T ss_dssp HHHHHHTTCCSEEEEESTTTT-C-----CHHHH--------HHHHHHHHHHHHT-TCEEEEECSCCTTTGGGCSEEEEEE
T ss_pred HHHHHHHcCCCEEEEcCcccc-C-----CHHHH--------HHHHHHHHHHHHc-CCEEEEEeCCHHHHHHhCCEEEEEE
Confidence 344455678999999995432 2 11111 2566777777666 7777664432222223455666774
Q ss_pred cCCcEEEE
Q 025863 186 SDGKLIAK 193 (247)
Q Consensus 186 p~G~il~~ 193 (247)
+|+++..
T Consensus 213 -~G~i~~~ 219 (266)
T 2yz2_A 213 -KGKKVFD 219 (266)
T ss_dssp -TTEEEEE
T ss_pred -CCEEEEe
Confidence 7887643
No 113
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=20.08 E-value=1.1e+02 Score=25.93 Aligned_cols=41 Identities=10% Similarity=0.171 Sum_probs=28.1
Q ss_pred HHHHHHHHHHCCCeEEEcCCCCCCCCCCCCcchhhhhhccCCCChHHHHHHHHHHHhcCcEEE
Q 025863 103 ARRAIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIV 165 (247)
Q Consensus 103 i~~~i~~Aa~~gadLVVfPE~~l~g~~~~~~~~~~e~~~~~~~~~~~~~~l~~~Ar~~~i~Iv 165 (247)
++++++++++.|+|-|+.|-+.. +..+.+.+.++++++..+
T Consensus 114 ~~~f~~~~~~aGvdGvIipDlp~----------------------ee~~~~~~~~~~~gl~~I 154 (271)
T 3nav_A 114 IDDFYQRCQKAGVDSVLIADVPT----------------------NESQPFVAAAEKFGIQPI 154 (271)
T ss_dssp HHHHHHHHHHHTCCEEEETTSCG----------------------GGCHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHCCCCEEEECCCCH----------------------HHHHHHHHHHHHcCCeEE
Confidence 46777777778899888886533 112347778888887654
Done!