Query 025864
Match_columns 247
No_of_seqs 201 out of 1418
Neff 8.1
Searched_HMMs 46136
Date Fri Mar 29 10:22:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025864.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/025864hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0223 Aquaporin (major intri 100.0 8.3E-53 1.8E-57 355.2 22.6 229 9-242 2-235 (238)
2 PLN00166 aquaporin TIP2; Provi 100.0 1.6E-49 3.5E-54 340.3 26.3 243 4-246 4-250 (250)
3 PLN00027 aquaporin TIP; Provis 100.0 1.8E-49 3.9E-54 341.0 25.7 240 7-247 9-252 (252)
4 PLN00184 aquaporin NIP1; Provi 100.0 1.4E-48 3.1E-53 340.7 25.2 221 14-238 50-278 (296)
5 PLN00182 putative aquaporin NI 100.0 3.5E-47 7.7E-52 330.0 25.7 214 16-233 40-254 (283)
6 PLN00026 aquaporin NIP; Provi 100.0 1.9E-47 4.1E-52 333.0 24.0 223 14-241 67-290 (298)
7 PLN00167 aquaporin TIP5; Provi 100.0 6.7E-47 1.5E-51 325.0 26.0 230 9-239 13-246 (256)
8 PF00230 MIP: Major intrinsic 100.0 3.8E-47 8.3E-52 323.0 20.2 218 11-228 1-227 (227)
9 PTZ00016 aquaglyceroporin; Pro 100.0 3.1E-46 6.8E-51 326.7 25.1 219 15-236 47-293 (294)
10 PRK05420 aquaporin Z; Provisio 100.0 9.3E-46 2E-50 314.2 25.0 213 18-234 2-229 (231)
11 KOG0224 Aquaporin (major intri 100.0 2.6E-47 5.6E-52 324.3 13.8 223 13-237 27-279 (316)
12 COG0580 GlpF Glycerol uptake f 100.0 7.4E-46 1.6E-50 312.1 21.0 216 16-233 3-240 (241)
13 PLN00183 putative aquaporin NI 100.0 1.6E-43 3.5E-48 306.1 24.3 221 13-238 40-261 (274)
14 cd00333 MIP Major intrinsic pr 100.0 1.2E-42 2.7E-47 295.4 21.5 211 19-231 1-228 (228)
15 TIGR00861 MIP MIP family chann 100.0 7.8E-41 1.7E-45 282.2 20.8 205 23-228 1-216 (216)
16 PLN00026 aquaporin NIP; Provi 99.7 1.3E-16 2.7E-21 139.7 8.6 105 130-234 65-173 (298)
17 PLN00184 aquaporin NIP1; Provi 99.7 2.1E-16 4.6E-21 138.4 9.7 103 132-234 50-156 (296)
18 PLN00167 aquaporin TIP5; Provi 99.6 7.2E-15 1.6E-19 126.6 10.7 103 132-234 18-129 (256)
19 PLN00183 putative aquaporin NI 99.6 9.4E-15 2E-19 126.9 10.6 112 16-135 159-271 (274)
20 PLN00166 aquaporin TIP2; Provi 99.6 6.2E-15 1.3E-19 126.7 8.5 101 133-233 15-124 (250)
21 cd00333 MIP Major intrinsic pr 99.6 1.2E-14 2.6E-19 123.7 9.2 99 14-117 126-227 (228)
22 PLN00182 putative aquaporin NI 99.6 1.1E-14 2.3E-19 127.0 9.0 102 132-233 38-143 (283)
23 PLN00027 aquaporin TIP; Provis 99.5 2.5E-14 5.5E-19 123.2 9.0 99 134-232 18-125 (252)
24 PRK05420 aquaporin Z; Provisio 99.5 2.6E-14 5.7E-19 121.6 8.9 99 136-234 2-105 (231)
25 PTZ00016 aquaglyceroporin; Pro 99.5 2.2E-14 4.8E-19 126.0 7.9 102 134-235 48-153 (294)
26 COG0580 GlpF Glycerol uptake f 99.5 2.1E-13 4.5E-18 115.5 8.5 107 134-240 3-116 (241)
27 TIGR00861 MIP MIP family chann 99.5 1.4E-13 3.1E-18 116.1 7.2 95 141-235 1-104 (216)
28 KOG0223 Aquaporin (major intri 99.4 1.2E-13 2.6E-18 117.1 4.5 103 11-122 125-228 (238)
29 KOG0224 Aquaporin (major intri 99.4 2.8E-13 6E-18 116.4 5.7 105 134-238 30-139 (316)
30 PF00230 MIP: Major intrinsic 99.2 1.6E-10 3.5E-15 98.1 10.4 100 10-115 127-227 (227)
31 PRK11562 nitrite transporter N 90.5 11 0.00024 32.9 13.4 99 54-155 59-170 (268)
32 PRK09713 focB putative formate 82.5 34 0.00073 30.1 13.9 98 54-155 68-180 (282)
33 COG2116 FocA Formate/nitrite f 82.0 34 0.00073 29.8 14.3 101 52-155 63-178 (265)
34 PRK10805 formate transporter; 73.4 64 0.0014 28.4 17.7 98 54-155 69-181 (285)
35 PF01226 Form_Nir_trans: Forma 52.0 1.5E+02 0.0033 25.4 12.1 102 52-155 56-170 (250)
36 PF03033 Glyco_transf_28: Glyc 44.4 6.9 0.00015 29.6 -0.2 20 72-91 6-25 (139)
37 PRK12446 undecaprenyldiphospho 35.0 16 0.00035 32.9 0.7 19 72-90 9-27 (352)
38 PF04632 FUSC: Fusaric acid re 30.9 5E+02 0.011 25.1 12.8 121 79-233 371-491 (650)
39 PF09622 DUF2391: Putative int 24.7 4.7E+02 0.01 22.8 9.2 60 92-151 93-156 (267)
40 PF14034 Spore_YtrH: Sporulati 24.0 2.5E+02 0.0054 20.8 5.1 47 75-121 53-101 (102)
41 KOG3030 Lipid phosphate phosph 23.4 1.7E+02 0.0036 26.3 5.0 71 166-236 183-266 (317)
42 PRK09979 putative rho operon l 23.2 34 0.00074 19.1 0.4 14 72-85 5-18 (33)
43 PF09163 Form-deh_trans: Forma 20.3 1.6E+02 0.0034 18.3 3.0 21 218-238 20-40 (44)
No 1
>KOG0223 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=8.3e-53 Score=355.18 Aligned_cols=229 Identities=49% Similarity=0.845 Sum_probs=208.0
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCcchHHHHHHHHHHHHHHHHHHh-hcCCCCCchHHHHHHH
Q 025864 9 HREATQPDCIKALVVEFITTFLFVFVGVGSAMAADKLVGNALVGLFFVAVAHAFVVAVMISAG-HISGGHLNPAVTLGLL 87 (247)
Q Consensus 9 ~~~~~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~-~iSG~h~NPavTla~~ 87 (247)
.++..+.+.+|++++||++|++++|++|++...... .+.+.+.+.+++++|+.+++.++.. ++||||+|||||++++
T Consensus 2 ~~~~~~~~~~~~~~aEF~~T~~~vf~g~~~~~~~~~--~~~~~~l~~ial~~Gl~v~v~i~~~g~iSGaH~NPAVT~a~~ 79 (238)
T KOG0223|consen 2 SGELLSVSFLRALIAEFLATFLFVFAGCGSVVVNPK--YGGPVGLLGIALAFGLAVFVLVYSTGHISGAHFNPAVTLAFA 79 (238)
T ss_pred ccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhccc--cCCCchhHHHHHHHHHHHHHHHhhhccccccccCHHHHHHHH
Confidence 356678899999999999999999999998866543 3456778899999999999999999 9999999999999999
Q ss_pred HhcCcchhHHHHHHHHHHHHHHHHHHHHHHHhCCC----CCCeeecCCCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCC
Q 025864 88 FGGHITFFRSILYWIDQLLASSAACFLLSYLTGGL----STPVHTLASGVGYFQGIIWEIILTFSLLFTVYATIVDPKKG 163 (247)
Q Consensus 88 l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~E~~~T~~l~~~v~~~~~~~~~~ 163 (247)
+.|++++.++..|+++|++|+++|+.+++.+.+++ ......++++.+..|+++.|++.||.|+++++.+.+|+|+.
T Consensus 80 ~~~~isl~~~~~Y~vaQ~lGa~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~E~ilTf~Lv~~v~~~a~d~~~~ 159 (238)
T KOG0223|consen 80 VGGKISLFRAVAYIVAQLLGAIAGAALLKVVTPGQYNRKGLGLTGLAPGLSTGQGLVIEIILTFILVFTVFATATDPRRS 159 (238)
T ss_pred HhCCCcHHHhHHHHHHHHHHHHHHHHHHheecCcccccCCcceeccCCCCCcchhHHHHHHHHHHHhheeEEEeecCCCc
Confidence 99999999999999999999999999999998874 23345677889999999999999999999999988999875
Q ss_pred CCCChhHHHHHHHHHHHHHhcCCCCCCCcchhhhHHHHHcccCCCcceeccchhhHHHHHHHHHHHHhhhcCcCCCCCC
Q 025864 164 SIDGLGPLLTGFVVGANILAGGPFSGASMNPARSFGPALVSGDWTDHWVYWVGPLIGGGLAGFIYEHFFIVRSHVPIPY 242 (247)
Q Consensus 164 ~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~~~~~~wvy~v~p~~Ga~~a~~~~~~~~~~~~~~~~~~ 242 (247)
.+.|+.||+++...+++++++||++|||||+|||++..+.|+++|+||++|++|+++++++|+.++.|+.+++.++
T Consensus 160 ---~~a~l~IG~~v~~~~l~~g~~TG~sMNPArSfGpAvv~~~w~~hwiYwvgP~~Ga~~a~~~y~~v~~~~~~~~~~~ 235 (238)
T KOG0223|consen 160 ---ELAPLAIGFSVGLNILAAGPFTGASMNPARSFGPAVVYGSWDDHWIYWVGPLLGAILAALIYRLVFIPDESEPTKS 235 (238)
T ss_pred ---ccHHHHHHHHHHHHHHeecCcCcCccCcHHHhhHHHHhcCCCcEEEEEhhHHHHHHHHHHHHHHhccCccccccCc
Confidence 7899999999999999999999999999999999999999999999999999999999999999998884444433
No 2
>PLN00166 aquaporin TIP2; Provisional
Probab=100.00 E-value=1.6e-49 Score=340.35 Aligned_cols=243 Identities=54% Similarity=0.944 Sum_probs=204.1
Q ss_pred cccCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHhhccccccC---CcchHHHHHHHHHHHHHHHHHHh-hcCCCCCc
Q 025864 4 IALGSHREATQPDCIKALVVEFITTFLFVFVGVGSAMAADKLVGN---ALVGLFFVAVAHAFVVAVMISAG-HISGGHLN 79 (247)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~---~~~~~~~~~l~~g~~~~~~i~~~-~iSG~h~N 79 (247)
+...+.+|..+.+.+|++++||++|++++|+++++.....+..++ ...+++.+++++|+++.+.++++ ++||+|+|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~aEfigTf~lv~~g~g~~~~~~~~~~~~~~~~~~~~~ial~~Gl~v~~~i~~~g~iSGah~N 83 (250)
T PLN00166 4 IEFGSLGDSFSVASLKAYLSEFIATLLFVFAGVGSAIAFAKLTSDAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLN 83 (250)
T ss_pred cccCchHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCccHHHHHHHHHHHHHHHHHHhcccccccC
Confidence 333444555567889999999999999999999987542121111 12356778899999999999999 99999999
Q ss_pred hHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCeeecCCCCchHHHHHHHHHHHHHHHHHHHHHhcC
Q 025864 80 PAVTLGLLFGGHITFFRSILYWIDQLLASSAACFLLSYLTGGLSTPVHTLASGVGYFQGIIWEIILTFSLLFTVYATIVD 159 (247)
Q Consensus 80 PavTla~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~l~~~v~~~~~~ 159 (247)
||||+++++.|+++|.+.+.|+++|++|+++|+.+.+.+.+++........++.+..++++.|+++|++|+++++.+..|
T Consensus 84 PAvt~~~~l~g~~~~~~~~~y~~aq~lGa~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~v~Tf~Lv~~i~~~~~~ 163 (250)
T PLN00166 84 PAVTLGLAIGGNITIITGFFYWIAQCLGSIVACLLLVFVTNGESVPTHGVAAGLGAIEGVVMEIVVTFALVYTVYATAAD 163 (250)
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcccccCCCCcHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 99999999999999999999999999999999999998876543333334456788999999999999999999986566
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHhcCCCCCCCcchhhhHHHHHcccCCCcceeccchhhHHHHHHHHHHHHhhhcCcCCC
Q 025864 160 PKKGSIDGLGPLLTGFVVGANILAGGPFSGASMNPARSFGPALVSGDWTDHWVYWVGPLIGGGLAGFIYEHFFIVRSHVP 239 (247)
Q Consensus 160 ~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~~~~~~wvy~v~p~~Ga~~a~~~~~~~~~~~~~~~ 239 (247)
+|+...+...|+.+|+.+...++..+++||+++||||+|||++.+++|+++|+||++|++|+++++++|+.++.+..++.
T Consensus 164 ~~~~~~~~~~p~~iGl~v~~~~~~~~~~tG~~~NPAR~~gPal~~~~~~~~wvywvgPi~Ga~~aa~~y~~l~~~~~~~~ 243 (250)
T PLN00166 164 PKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGDFSQIWIYWVGPLVGGALAGLIYGDVFIGSYAAA 243 (250)
T ss_pred ccccccccchhHHHHHHHHHHHHcccCCCCCccCchHhhHHHHhcCCCcccchhhHHHHHHHHHHHHHHHHHhcccCCCC
Confidence 55443446789999999999999999999999999999999999999999999999999999999999998877666666
Q ss_pred CCCCCCC
Q 025864 240 IPYEEAR 246 (247)
Q Consensus 240 ~~~~~~~ 246 (247)
+.+|||.
T Consensus 244 ~~~~~~~ 250 (250)
T PLN00166 244 PTSEDYA 250 (250)
T ss_pred CCCcccC
Confidence 6677763
No 3
>PLN00027 aquaporin TIP; Provisional
Probab=100.00 E-value=1.8e-49 Score=341.00 Aligned_cols=240 Identities=55% Similarity=1.009 Sum_probs=204.0
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHhhccccc-cC--CcchHHHHHHHHHHHHHHHHHHh-hcCCCCCchHH
Q 025864 7 GSHREATQPDCIKALVVEFITTFLFVFVGVGSAMAADKLV-GN--ALVGLFFVAVAHAFVVAVMISAG-HISGGHLNPAV 82 (247)
Q Consensus 7 ~~~~~~~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~-~~--~~~~~~~~~l~~g~~~~~~i~~~-~iSG~h~NPav 82 (247)
++.+|..+++.+|++++||++|++|+++++++.+...... ++ ...+.+.+++++|+++.+.++++ ++||+|+|||+
T Consensus 9 ~~~~~~~~~~~~~~~~aEfigTf~lv~~g~g~~~~~~~~~~~~~~~~~~~l~~~l~~Gl~v~~~i~~~~~iSGah~NPAv 88 (252)
T PLN00027 9 GTPGEASHPDALKAALAEFISTLIFVFAGEGSGMAFNKLTDNGSTTPAGLVAAALAHAFALFVAVSVGANISGGHVNPAV 88 (252)
T ss_pred CchHhhhcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCcchHHHHHHHHHHHHHHHHHHcccCccccChHH
Confidence 3444555678899999999999999999999865432211 11 13456778999999999999999 99999999999
Q ss_pred HHHHHHhcCcchhHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCeeecCCCCchHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 025864 83 TLGLLFGGHITFFRSILYWIDQLLASSAACFLLSYLTGGLSTPVHTLASGVGYFQGIIWEIILTFSLLFTVYATIVDPKK 162 (247)
Q Consensus 83 Tla~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~l~~~v~~~~~~~~~ 162 (247)
|+++++.|+++|.+.+.|+++|++|+++|+.+.+.+.++.....+...++.+..++++.|+++|++|+++++.+..|+++
T Consensus 89 tl~~~~~g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~i~Tf~Lv~~i~~~~~~~~~ 168 (252)
T PLN00027 89 TFGAFIGGNITLLRGILYWIAQLLGSVVACLLLKFSTGGLETSAFSLSSGVGVWNAFVFEIVMTFGLVYTVYATAVDPKK 168 (252)
T ss_pred HHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCCccHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 99999999999999999999999999999999998876654455666678899999999999999999999986667665
Q ss_pred CCCCChhHHHHHHHHHHHHHhcCCCCCCCcchhhhHHHHHcccCCCcceeccchhhHHHHHHHHHHHHhhhcCcCCCCCC
Q 025864 163 GSIDGLGPLLTGFVVGANILAGGPFSGASMNPARSFGPALVSGDWTDHWVYWVGPLIGGGLAGFIYEHFFIVRSHVPIPY 242 (247)
Q Consensus 163 ~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~~~~~~wvy~v~p~~Ga~~a~~~~~~~~~~~~~~~~~~ 242 (247)
.+.+...|+.+|+.+...+++.+++||+++||||+|||++.+++|+++|+||+||++|+++++++|++++.+++ ..++.
T Consensus 169 ~~~~~~~p~~iGl~v~~~~~~~g~~TG~~~NPAR~~gPal~~~~~~~~wvy~vgP~~Ga~laa~~y~~l~~~~~-~~~~~ 247 (252)
T PLN00027 169 GDLGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWTNHWVYWAGPLIGGGIAGLVYELIFIGST-THEQL 247 (252)
T ss_pred CCccchHHHHHHHHHHHHHHhcccccccccCcchhHHHHHHhhcchhhhHHHHHHHHHHHHHHHHHHHHhcCCc-ccccc
Confidence 44456889999999999999999999999999999999999999999999999999999999999999986533 34555
Q ss_pred CCCCC
Q 025864 243 EEARF 247 (247)
Q Consensus 243 ~~~~~ 247 (247)
++|||
T Consensus 248 ~~~~~ 252 (252)
T PLN00027 248 PTTDY 252 (252)
T ss_pred CCCCC
Confidence 56654
No 4
>PLN00184 aquaporin NIP1; Provisional
Probab=100.00 E-value=1.4e-48 Score=340.66 Aligned_cols=221 Identities=30% Similarity=0.466 Sum_probs=188.3
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCcchHHHHHHHHHHHHHHHHHHh-hcCCCCCchHHHHHHHHhcCc
Q 025864 14 QPDCIKALVVEFITTFLFVFVGVGSAMAADKLVGNALVGLFFVAVAHAFVVAVMISAG-HISGGHLNPAVTLGLLFGGHI 92 (247)
Q Consensus 14 ~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~-~iSG~h~NPavTla~~l~g~~ 92 (247)
+.+.+|++++||+||++|+|+++++...... .+...++..++++||+++++.++++ ++||+|+|||||+++++.|++
T Consensus 50 ~~~~~~~~~aEfiGTflLvf~g~g~~~~~~~--~~~~~~~~~iai~~Gl~v~~~i~~~g~iSGaH~NPAVTla~al~g~~ 127 (296)
T PLN00184 50 SVPFLQKLIAEVLGTYFLVFTGCASVVVNMQ--NDNVVTLPGIAIVWGLTIMVLIYSLGHISGAHINPAVTIAFASCGRF 127 (296)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHhhccc--CCCccccHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHhCCC
Confidence 4467899999999999999999987654321 1222357778899999999999999 999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHhCCCCC------C-eeecCCCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC
Q 025864 93 TFFRSILYWIDQLLASSAACFLLSYLTGGLST------P-VHTLASGVGYFQGIIWEIILTFSLLFTVYATIVDPKKGSI 165 (247)
Q Consensus 93 ~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~------~-~~~~~~~~~~~~~~~~E~~~T~~l~~~v~~~~~~~~~~~~ 165 (247)
+|.+.+.|+++|++|+++|+.+++.+++.... . .+...+..+..++++.|+++|++|+++++++..|+++ .
T Consensus 128 ~~~~~~~YiiaQllGA~lga~~~~~l~~~~~~~~~~~~~~~~~t~p~~s~~~af~~E~i~TfvLv~~il~~~~~~~~--~ 205 (296)
T PLN00184 128 PLKQVPAYVISQVIGSTLAAATLRLLFGLDHDVCSGKHDVFIGSSPVGSDLQAFVMEFIVTFYLMFIISGVATDNRA--I 205 (296)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhccccccceeeccCcCCcHHHHHHHHHHHHHHHHHHHHheeccCcC--C
Confidence 99999999999999999999999988753211 1 1223344588999999999999999999986455432 3
Q ss_pred CChhHHHHHHHHHHHHHhcCCCCCCCcchhhhHHHHHcccCCCcceeccchhhHHHHHHHHHHHHhhhcCcCC
Q 025864 166 DGLGPLLTGFVVGANILAGGPFSGASMNPARSFGPALVSGDWTDHWVYWVGPLIGGGLAGFIYEHFFIVRSHV 238 (247)
Q Consensus 166 ~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~~~~~~wvy~v~p~~Ga~~a~~~~~~~~~~~~~~ 238 (247)
+...++.||+++.+.++..+++||++|||||||||+++.+.|+++||||+||++|+++++++|++++.++.+.
T Consensus 206 ~~~~~l~IG~~v~~~~~~~g~~TG~smNPAR~~GPal~~~~~~~~WVy~vgPilGa~laal~y~~l~~~~~~~ 278 (296)
T PLN00184 206 GELAGLAIGSTVLLNVLIAAPVSSASMNPGRSLGPAMVYGCYKGIWIYIVAPTLGAIAGAWVYNTVRYTDKPL 278 (296)
T ss_pred CcchHHHHHHHHHHHHHHhcccCccccCchhhHHHHHHhhcccccchHHhHHHHHHHHHHHHHHHHhcCCCcc
Confidence 4578999999999999999999999999999999999999999999999999999999999999998655443
No 5
>PLN00182 putative aquaporin NIP4; Provisional
Probab=100.00 E-value=3.5e-47 Score=330.00 Aligned_cols=214 Identities=32% Similarity=0.528 Sum_probs=185.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCcchHHHHHHHHHHHHHHHHHHh-hcCCCCCchHHHHHHHHhcCcch
Q 025864 16 DCIKALVVEFITTFLFVFVGVGSAMAADKLVGNALVGLFFVAVAHAFVVAVMISAG-HISGGHLNPAVTLGLLFGGHITF 94 (247)
Q Consensus 16 ~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~-~iSG~h~NPavTla~~l~g~~~~ 94 (247)
+.+|++++||+||++|+|+++++..... .. +...+...+++++|+++.+.++++ ++||||+|||||+++++.|+++|
T Consensus 40 ~~~~~~~aEflgTflLvf~g~g~~~~~~-~~-~~~~~~~~iala~Gl~v~~~i~~~g~iSGah~NPAVTla~~~~~~~~~ 117 (283)
T PLN00182 40 CLTQKLIAEMIGTYFIIFSGCGVVVVNV-LY-GGTITFPGICVTWGLIVMVMIYSTGHISGAHFNPAVTVTFAIFRRFPW 117 (283)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhh-cc-CCCcchHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHHcCCCH
Confidence 5679999999999999999999765432 11 122356677889999999999999 99999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCeeecCCCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 025864 95 FRSILYWIDQLLASSAACFLLSYLTGGLSTPVHTLASGVGYFQGIIWEIILTFSLLFTVYATIVDPKKGSIDGLGPLLTG 174 (247)
Q Consensus 95 ~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~l~~~v~~~~~~~~~~~~~~~~~~~ig 174 (247)
.+.+.|+++|++|+++|+.+++.+++......+...++.+..++++.|+++|++|+++++.+..|+++ .+...++.+|
T Consensus 118 ~~~~~Yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~~p~~s~~~a~~~E~l~TfiLv~~i~~~~~~~~~--~~~~~~l~iG 195 (283)
T PLN00182 118 YQVPLYIGAQLTGSLLASLTLRLMFNVTPEAFFGTTPTDSSGQALVAEIIISFLLMFVISGVATDSRA--VGELAGIAVG 195 (283)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccccceeeCCCCcchHHHHHHHHHHHHHHHHHHHhheecccc--CCcchhHHHH
Confidence 99999999999999999999999885433333445556788999999999999999999985455432 3346799999
Q ss_pred HHHHHHHHhcCCCCCCCcchhhhHHHHHcccCCCcceeccchhhHHHHHHHHHHHHhhh
Q 025864 175 FVVGANILAGGPFSGASMNPARSFGPALVSGDWTDHWVYWVGPLIGGGLAGFIYEHFFI 233 (247)
Q Consensus 175 ~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~~~~~~wvy~v~p~~Ga~~a~~~~~~~~~ 233 (247)
+.+.+.+++.+++||+++||||+|+|+++.+.|+++|+||++|++|+++++++|+++..
T Consensus 196 l~V~~~~~~~g~~SGa~lNPARt~gpal~~~~~~~~wvY~vap~lGA~lgally~~l~~ 254 (283)
T PLN00182 196 MTIILNVFVAGPISGASMNPARSLGPAIVMGRYKGIWVYIVGPFVGIIAGGFVYNLIRF 254 (283)
T ss_pred HHHHHHHHHccccCccccChHHHHHHHHHhccccceeHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999889999999999999999999999999974
No 6
>PLN00026 aquaporin NIP; Provisional
Probab=100.00 E-value=1.9e-47 Score=333.00 Aligned_cols=223 Identities=29% Similarity=0.444 Sum_probs=189.7
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCcchHHHHHHHHHHHHHHHHHHh-hcCCCCCchHHHHHHHHhcCc
Q 025864 14 QPDCIKALVVEFITTFLFVFVGVGSAMAADKLVGNALVGLFFVAVAHAFVVAVMISAG-HISGGHLNPAVTLGLLFGGHI 92 (247)
Q Consensus 14 ~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~-~iSG~h~NPavTla~~l~g~~ 92 (247)
+.+.+|++++||+||++|+|+++++.+.... . +...+++.+++++|+++.+.++++ ++||||+|||||+++++.+++
T Consensus 67 ~~~~~r~~laEfiGTflLvf~g~~~~~~~~~-~-~~~~~~~~ial~~GlaV~~~i~~~g~ISGaHlNPAVTla~al~g~~ 144 (298)
T PLN00026 67 DVSLTRKLGAEFVGTFILIFAATAGPIVNQK-Y-DGAETLIGNAACAGLAVMIVILSTGHISGAHLNPSLTIAFAALRHF 144 (298)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHhccc-c-CCccchHHHHHHHHHHHHHHHHHhhccCccccCHHHHHHHHHhCCC
Confidence 4467899999999999999999976543221 1 112356677899999999999999 999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCeeecCCCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCChhHHH
Q 025864 93 TFFRSILYWIDQLLASSAACFLLSYLTGGLSTPVHTLASGVGYFQGIIWEIILTFSLLFTVYATIVDPKKGSIDGLGPLL 172 (247)
Q Consensus 93 ~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~l~~~v~~~~~~~~~~~~~~~~~~~ 172 (247)
+|.+.+.|+++|++|+++|+++++.++++...... ..++.+..++++.|+++|++|+++++.+..|+++ .+...++.
T Consensus 145 ~~~~~~~YiiaQilGAi~aa~~~~~~~~~~~~~g~-t~p~~s~~~a~~~Efi~TfiLv~vi~~v~~~~~~--~~~~~~l~ 221 (298)
T PLN00026 145 PWKHVPAYIAAQVSASICASFALKGVFHPFMSGGV-TVPSVSTGQAFALEFIITFNLLFVVTAVATDTRA--VGELAGIA 221 (298)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCce-eeecccHHHHHHHHHHHHHHHHHhheeeecCCCC--cCCccchH
Confidence 99999999999999999999999998865322222 2246789999999999999999999986455543 33467899
Q ss_pred HHHHHHHHHHhcCCCCCCCcchhhhHHHHHcccCCCcceeccchhhHHHHHHHHHHHHhhhcCcCCCCC
Q 025864 173 TGFVVGANILAGGPFSGASMNPARSFGPALVSGDWTDHWVYWVGPLIGGGLAGFIYEHFFIVRSHVPIP 241 (247)
Q Consensus 173 ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~~~~~~wvy~v~p~~Ga~~a~~~~~~~~~~~~~~~~~ 241 (247)
+|+.+...++..++.||+++||||||+|++..++|+++|+||+||++|+++++++|+.+..+++++.++
T Consensus 222 iGl~V~~~~l~~g~~TGa~mNPARtlgPal~~~~~~~~wVy~vaPilGAilga~ly~~~~~~~~~~~~~ 290 (298)
T PLN00026 222 VGATVMLNILVAGPSTGGSMNPVRTLGPAVAAGNYRAIWIYLVAPTLGALAGAGTYTAVKLREEDGDPP 290 (298)
T ss_pred HHHHHHHHHHHhcccCccccChHHHHHHHHhcCCchheeHHHHHHHHHHHHHHHHHHHHhCccccccCh
Confidence 999999999999999999999999999999999999999999999999999999999997666655443
No 7
>PLN00167 aquaporin TIP5; Provisional
Probab=100.00 E-value=6.7e-47 Score=324.97 Aligned_cols=230 Identities=43% Similarity=0.819 Sum_probs=195.2
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc-C--CcchHHHHHHHHHHHHHHHHHHh-hcCCCCCchHHHH
Q 025864 9 HREATQPDCIKALVVEFITTFLFVFVGVGSAMAADKLVG-N--ALVGLFFVAVAHAFVVAVMISAG-HISGGHLNPAVTL 84 (247)
Q Consensus 9 ~~~~~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~-~--~~~~~~~~~l~~g~~~~~~i~~~-~iSG~h~NPavTl 84 (247)
.++..+++.+|++++||+||++++++++++........+ + .+.+++.+++++|+++.+.++++ ++||+|+|||||+
T Consensus 13 ~~~~~~~~~~~~~laEflgTf~lv~~~~g~~~~~~~~~~~~~~~~~~~~~i~l~~Gl~v~~~i~~~g~iSGah~NPAvtl 92 (256)
T PLN00167 13 FQQSVTRNALRSYLAEFISTFFFVFAAVGSAMSSRKLMPDAASDPSSLLIVAIANAFALSSAVYIAANISGGHVNPAVTF 92 (256)
T ss_pred hhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccCCCCcchHHHHHHHHHHHHHHHHhhcccccccCHHHHH
Confidence 344457789999999999999999999998764322111 1 23457889999999999999999 9999999999999
Q ss_pred HHHHhcCcchhHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCeeecCCCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCC
Q 025864 85 GLLFGGHITFFRSILYWIDQLLASSAACFLLSYLTGGLSTPVHTLASGVGYFQGIIWEIILTFSLLFTVYATIVDPKKGS 164 (247)
Q Consensus 85 a~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~l~~~v~~~~~~~~~~~ 164 (247)
+.++.|+++|++.+.|+++|++|+++|+.+++.++++...+.....++.+..++++.|+++|++|+++++. ..|+++..
T Consensus 93 ~~~~~g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~i~T~~L~~~i~~-~~~~~~~~ 171 (256)
T PLN00167 93 GMAVGGHISVPTAMFYWISQMLASVMACLFLKVTTVGQHVPTYKIAEEMTGFGASVLEGVLTFGLVYTVYA-AGDPRRGL 171 (256)
T ss_pred HHHHhCCCcHhhhhHHHHHHHHHHHHHHHHHHHhhccccccccccCcccchHHHHHHHHHHHHHHHHHHHH-hccccccC
Confidence 99999999999999999999999999999999887553323333334567789999999999999999998 46766544
Q ss_pred CCChhHHHHHHHHHHHHHhcCCCCCCCcchhhhHHHHHcccCCCcceeccchhhHHHHHHHHHHHHhhhcCcCCC
Q 025864 165 IDGLGPLLTGFVVGANILAGGPFSGASMNPARSFGPALVSGDWTDHWVYWVGPLIGGGLAGFIYEHFFIVRSHVP 239 (247)
Q Consensus 165 ~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~~~~~~wvy~v~p~~Ga~~a~~~~~~~~~~~~~~~ 239 (247)
.+...|+.+|+.+....+..+++||+++||||||||+++.+.|+++|+||+||++|+++++++|++++.|...++
T Consensus 172 ~~~~~pl~iGl~v~~~~~~~g~~TG~a~NPAR~~gPal~~~~~~~~wvywvgP~~Ga~l~a~~y~~l~~~~~~~~ 246 (256)
T PLN00167 172 LGAIGPLAIGLVAGANVLAAGPFSGGSMNPACAFGSAVVAGSFKNQAVYWVGPLLGGAVAGLLYDNVVFPTQDDR 246 (256)
T ss_pred CCCcchHHHHHHHHHHHHhccCCCCcccCcccchHHHHhccCccCcEEEeHHHHHHHHHHHHHHHHHhCCCcCCC
Confidence 445789999999999999999999999999999999999989999999999999999999999999986655443
No 8
>PF00230 MIP: Major intrinsic protein; InterPro: IPR000425 A number of transmembrane (TM) channel proteins can be grouped together on the basis of sequence similarities [, , , , ]. These include: Mammalian major intrinsic protein (MIP). MIP is the major component of lens fibre gap junctions. Mammalian aquaporins []. These proteins form water- specific channels that provide the plasma membranes of red cells and kidney prox imal and collecting tubules with high permeability to water, thereby permitting water to move in the direction of an osmotic gradient. Soybean nodulin-26, a major component of the peribacteroid membrane induced during nodulation in legume roots after Rhizobium infection. Plants tonoplast intrinsic proteins (TIP). There are various isoforms of TIP : alpha (seed), gamma, Rt (root), and Wsi (water-stress induced). These proteins may allow the diffusion of water, amino acids and/or peptides from the tonoplas t interior to the cytoplasm. Bacterial glycerol facilitator protein (gene glpF), which facilitates the mo vement of glycerol across the cytoplasmic membrane. Salmonella typhimurium propanediol diffusion fac ilitator (gene pduF). Yeast FPS1, a glycerol uptake/efflux facilitator protein. Drosophila neurogenic protein 'big brain' (bib). This protein may mediate in tercellular communication; it may functions by allowing the transport of certain molecules(s) and thereby sending a signal for an exodermal cell to become an ep idermoblast instead of a neuroblast. Yeast hypothetical protein YFL054c. A hypothetical protein from the pepX region of Lactococcus lactis. The structures of various members of the MIP family have been determined by means of X-ray diffraction [, , ], revealing the fold to comprise a right-handed bundle of 6 transmembrane (TM) alpha-helices [, , ]. Similarities in the N-and C-terminal halves of the molecule suggest that the proteins may have arisen through tandem, intragenic duplication of an ancestral protein that contained 3 TM domains []. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins []. Aquaporin-CHIP (Aquaporin 1) belongs to the Colton blood group system and is associated with Co(a/b) antigen.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3NE2_A 2C32_A 1YMG_A 2B6P_A 3C02_A 2B5F_D 3CN6_A 3CN5_A 1Z98_M 3CLL_A ....
Probab=100.00 E-value=3.8e-47 Score=322.96 Aligned_cols=218 Identities=40% Similarity=0.670 Sum_probs=187.0
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHHHHHHHhhccccccC----CcchHHHHHHHHHHHHHHHHHHh-hcCCCCCchHHHHH
Q 025864 11 EATQPDCIKALVVEFITTFLFVFVGVGSAMAADKLVGN----ALVGLFFVAVAHAFVVAVMISAG-HISGGHLNPAVTLG 85 (247)
Q Consensus 11 ~~~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~----~~~~~~~~~l~~g~~~~~~i~~~-~iSG~h~NPavTla 85 (247)
|.++++++|++++||+||++++|+++++.........+ ...++..+++++|+++...++.+ ++||+|+||+||++
T Consensus 1 ~~~~~~~~r~~~aEfigT~~lvf~~~~~~~~~~~~~~~~~~~~~~~~~~ial~~g~~~~~~i~~~~~iSGaH~NPaVTla 80 (227)
T PF00230_consen 1 ELKSPSLWRKFLAEFIGTFLLVFFGCGSVAALNGSTSSSGSDVSGGWLQIALAWGLALAALIYAFGPISGAHFNPAVTLA 80 (227)
T ss_dssp GCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSTTSTTSSHHHHHHHHHHHHHHHHHHHHHHHHHTSS-SHHHHHH
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccHHHHHHHHHHhhhhhhhhhhhccccccccchhhh
Confidence 45678999999999999999999999876543322211 22467888999999999999998 99999999999999
Q ss_pred HHHhcCcchhHHHHHHHHHHHHHHHHHHHHHHHhCCC--CCC--eeecCCCCchHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 025864 86 LLFGGHITFFRSILYWIDQLLASSAACFLLSYLTGGL--STP--VHTLASGVGYFQGIIWEIILTFSLLFTVYATIVDPK 161 (247)
Q Consensus 86 ~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~~E~~~T~~l~~~v~~~~~~~~ 161 (247)
.++.|++++++.+.|+++|++|+++|+.+.+.++++. ... ...+.++.+..++++.|+++|++|+++++.+..|++
T Consensus 81 ~~l~g~~~~~~~~~Yi~aQ~lGa~~g~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~~~t~il~~~i~~~~~~~~ 160 (227)
T PF00230_consen 81 FALTGRISWKKAIVYIIAQFLGAFLGALLVYALYPDSNSAAGIFATTPPPGISLGQAFFSEFIGTFILVLVILAVADDKR 160 (227)
T ss_dssp HHHTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHSTHHHTCTTTTSCGSTTTSSHHHHHHHHHHHHHHHHHHHHHHTSTTS
T ss_pred eeeeeeecccceeeEEeeccccccccccchhhcccCcccccccccccccccchhhhhhhhhhhhhhHHHhhhhhhccccc
Confidence 9999999999999999999999999999999998763 222 234667789999999999999999999999654444
Q ss_pred CCCCCChhHHHHHHHHHHHHHhcCCCCCCCcchhhhHHHHHcccCCCcceeccchhhHHHHHHHHHH
Q 025864 162 KGSIDGLGPLLTGFVVGANILAGGPFSGASMNPARSFGPALVSGDWTDHWVYWVGPLIGGGLAGFIY 228 (247)
Q Consensus 162 ~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~~~~~~wvy~v~p~~Ga~~a~~~~ 228 (247)
+...+...|+.||+.+.+..+..++.||+++||||+++++++...|+++|+||++|++|+++|+++|
T Consensus 161 ~~~~~~~~p~~ig~~v~~~~~~~~~~tG~~~NPAr~~g~~l~~~~~~~~wvy~~~P~~Ga~~a~~~Y 227 (227)
T PF00230_consen 161 KFPLGPLAPLAIGLTVGALVLAGGPYTGASLNPARALGPALFSGIWDYFWVYWVGPFIGAILAALLY 227 (227)
T ss_dssp SSTSSGGHHHHHHHHHHHHHHHHHHHHST-SSHHHHHHHHHHHTHHTTTTHHHHHHHHHHHHHHHHH
T ss_pred ccccccccceeEEEEEeecccccccccccccCchhhcCceeecccCCeEEEEEehHHHHHHHHHhhC
Confidence 4333557899999999999999999999999999999999999999999999999999999999987
No 9
>PTZ00016 aquaglyceroporin; Provisional
Probab=100.00 E-value=3.1e-46 Score=326.71 Aligned_cols=219 Identities=30% Similarity=0.439 Sum_probs=186.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCcchHHHHHHHHHHHHHHHHHHh-hcCCCCCchHHHHHHHHhcCcc
Q 025864 15 PDCIKALVVEFITTFLFVFVGVGSAMAADKLVGNALVGLFFVAVAHAFVVAVMISAG-HISGGHLNPAVTLGLLFGGHIT 93 (247)
Q Consensus 15 ~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~-~iSG~h~NPavTla~~l~g~~~ 93 (247)
++++|++++||+||++++|+++++...... . +...+...+++++|+++.+.++++ ++||+|+|||||+++++.|+++
T Consensus 47 ~~~~~~~laEfigT~llvf~g~g~~~~~~~-~-~~~~~~~~ial~~Glav~~~i~~~g~iSG~h~NPAVTla~~l~g~i~ 124 (294)
T PTZ00016 47 RPNVREYVAEFLGTFVLLFFGEGVVATTHT-V-GNNGDYLAITIGWGLGVTFGLLVSAGISGGHLNPAVTLGNAVFGKFP 124 (294)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcccc-c-CCCCCcHHHHHHHHHHHHHHHHHhcccCcCccCHHHHHHHHHhccCC
Confidence 678899999999999999999987654321 1 123456678899999999999999 9999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhCCC----C-------------CCeeecCCCCchHHHHHHHHHHHHHHHHHHHHH
Q 025864 94 FFRSILYWIDQLLASSAACFLLSYLTGGL----S-------------TPVHTLASGVGYFQGIIWEIILTFSLLFTVYAT 156 (247)
Q Consensus 94 ~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~----~-------------~~~~~~~~~~~~~~~~~~E~~~T~~l~~~v~~~ 156 (247)
|.+.+.|+++|++|+++|+++++.++++. + ...+.+.|+.+..++++.|+++|++|+++++.+
T Consensus 125 ~~~~~~YiiaQ~lGa~~ga~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t~p~~s~~~a~~~E~i~T~iLv~~ila~ 204 (294)
T PTZ00016 125 WKKLPGYFVAQLLGAFVGAACVYGLYYGFFKDHGIPELPWETMANGFAGVFATYPREGNFYAIFSELILTAILLLVILAI 204 (294)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhhcCcccccccccccccceeeCCCCccHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999876531 0 012344556788999999999999999999984
Q ss_pred hcCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCCcchhhhHHHHHcc------cCCC----cceeccchhhHHHHHHHH
Q 025864 157 IVDPKKGSIDGLGPLLTGFVVGANILAGGPFSGASMNPARSFGPALVS------GDWT----DHWVYWVGPLIGGGLAGF 226 (247)
Q Consensus 157 ~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~------~~~~----~~wvy~v~p~~Ga~~a~~ 226 (247)
+|+|+.......|+.||+.+....++.++.||+++||||||||+++. ..|+ ++|+||+||++|++++++
T Consensus 205 -~d~~~~~~~~~~pl~IGl~v~~i~~~~g~~TG~smNPAR~fGPal~~~~~~g~~~~~~~~~~~WVy~vgP~vGa~~aal 283 (294)
T PTZ00016 205 -TDPNNCPAFNYLPVAVGLLVFVIGISFGGNTGYALNPARDLGPRLFSAILWGSEVFTKDNYYFWVPLVAPFVGAVLGMF 283 (294)
T ss_pred -ccCccCCCcCcccHHHHHHHHHHHHhccCCCCCcccchhhHHHHHHHHHhccccccCcCCceeeeeehHHHHHHHHHHH
Confidence 77766544457899999999999999999999999999999999985 2454 689999999999999999
Q ss_pred HHHHhhhcCc
Q 025864 227 IYEHFFIVRS 236 (247)
Q Consensus 227 ~~~~~~~~~~ 236 (247)
+|++++.|..
T Consensus 284 ly~~ll~~~~ 293 (294)
T PTZ00016 284 LYDKFIPPLI 293 (294)
T ss_pred HHHHHhCCCC
Confidence 9999986654
No 10
>PRK05420 aquaporin Z; Provisional
Probab=100.00 E-value=9.3e-46 Score=314.23 Aligned_cols=213 Identities=33% Similarity=0.581 Sum_probs=180.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccccccCCcchHHHHHHHHHHHHHHHHHHh-hcCCCCCchHHHHHHHHhcCcchhH
Q 025864 18 IKALVVEFITTFLFVFVGVGSAMAADKLVGNALVGLFFVAVAHAFVVAVMISAG-HISGGHLNPAVTLGLLFGGHITFFR 96 (247)
Q Consensus 18 ~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~-~iSG~h~NPavTla~~l~g~~~~~~ 96 (247)
+|++++||+||++++|+++++....... ++...+.+.+++++|+++...++++ ++||+|+|||||+++++.|+++|++
T Consensus 2 ~~~~laEfigT~~lv~~g~~~~~~~~~~-~~~~~~~~~ial~~Gl~v~~~i~~~g~iSG~h~NPAvtl~~~~~~~i~~~~ 80 (231)
T PRK05420 2 FKKLAAEFFGTFWLVFGGCGSAVLAAAF-PELGIGFLGVALAFGLTVLTMAYAVGHISGGHFNPAVSVGLWAGGRFPAKE 80 (231)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHhhccc-CCCCCchHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHhCCCCHHH
Confidence 6899999999999999999976432211 1223356778999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCC---C--ee------e-cCCCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCC
Q 025864 97 SILYWIDQLLASSAACFLLSYLTGGLST---P--VH------T-LASGVGYFQGIIWEIILTFSLLFTVYATIVDPKKGS 164 (247)
Q Consensus 97 ~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~---~--~~------~-~~~~~~~~~~~~~E~~~T~~l~~~v~~~~~~~~~~~ 164 (247)
.+.|+++|++|+++|+.+++.++++... . .+ . .+...+..++++.|+++|++|+++++.. .|+|+
T Consensus 81 ~~~Y~~aQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~v~T~iLv~~i~~~-~~~~~-- 157 (231)
T PRK05420 81 LVPYIIAQVVGGIAAAAVLYLIASGKAGFDLAGSGFASNGYGEHSPGGYSLLAALVCEVVLTAFFLLVILGA-TDKRA-- 157 (231)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhCCccccccccccccccccccCCCCcccHHHHHHHHHHHHHHHHHHHHHH-hCCCC--
Confidence 9999999999999999999987754211 0 01 0 1123578899999999999999999984 67654
Q ss_pred CCChhHHHHHHHHHHHHHhcCCCCCCCcchhhhHHHHHcccCC--CcceeccchhhHHHHHHHHHHHHhhhc
Q 025864 165 IDGLGPLLTGFVVGANILAGGPFSGASMNPARSFGPALVSGDW--TDHWVYWVGPLIGGGLAGFIYEHFFIV 234 (247)
Q Consensus 165 ~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~~~--~~~wvy~v~p~~Ga~~a~~~~~~~~~~ 234 (247)
.....|+.+|+.+....+..+++||+++||||||+|++++++| +++|+||++|++|+++++++|++++.+
T Consensus 158 ~~~~~p~~iGl~v~~~~~~~~~~TG~s~NPAR~~gpal~~g~~~~~~~wvy~vgP~~Ga~laa~~y~~l~~~ 229 (231)
T PRK05420 158 PAGFAPIAIGLALTLIHLISIPVTNTSVNPARSTGVALFVGGWALEQLWLFWVAPIVGAIIGGLIYRLLLEK 229 (231)
T ss_pred CCcchHHHHHHHHHHHHHHhhccCCCccCcHHHHHHHHHhCCCCccceEEeehHHHHHHHHHHHHHHHHhcc
Confidence 3457899999999999999999999999999999999997755 589999999999999999999998654
No 11
>KOG0224 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.6e-47 Score=324.26 Aligned_cols=223 Identities=30% Similarity=0.468 Sum_probs=195.8
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCcchHHHHHHHHHHHHHHHHHHh-hcCCCCCchHHHHHHHHhcC
Q 025864 13 TQPDCIKALVVEFITTFLFVFVGVGSAMAADKLVGNALVGLFFVAVAHAFVVAVMISAG-HISGGHLNPAVTLGLLFGGH 91 (247)
Q Consensus 13 ~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~-~iSG~h~NPavTla~~l~g~ 91 (247)
.++++.|++++||+||++|++++++++.+. .++.++..+++.+.++||+++++.++++ ++||||+|||||++.++.||
T Consensus 27 i~~~l~Re~LAEFlGT~vL~~~G~g~v~Q~-vls~g~~g~~~~vnlgwg~av~~gVyvag~iSGgHlNPAVS~a~~~~g~ 105 (316)
T KOG0224|consen 27 IRNELLREFLAEFLGTFVLVVFGLGSVAQA-VLSGGTGGSFIGVNLGWGFAVMMGVYVAGRISGGHLNPAVSLAMCILGR 105 (316)
T ss_pred HHHHHHHHHHHHHHhHHHHHhhccceeEEE-EeccCCCCceEEEEehHhHHHHHHHHhhccccccccCHHHHHHHHHhcC
Confidence 366889999999999999999999987554 3444566677888899999999999999 99999999999999999999
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHhCC---------------CCC-Cee--ecCCCCchHHHHHHHHHHHHHHHHHH
Q 025864 92 ITFFRSILYWIDQLLASSAACFLLSYLTGG---------------LST-PVH--TLASGVGYFQGIIWEIILTFSLLFTV 153 (247)
Q Consensus 92 ~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~---------------~~~-~~~--~~~~~~~~~~~~~~E~~~T~~l~~~v 153 (247)
++|+|.++|+++|++||++|++..|.++.+ +.+ ..+ .|+|.++.+++|+.|+++|.+|+..+
T Consensus 106 ~p~~k~p~Y~~aQ~iGAF~gaa~~y~~y~d~i~~f~Gg~~~vtgp~aTAgiFaTyP~p~ls~~n~F~DqfigTa~L~~~l 185 (316)
T KOG0224|consen 106 LPWKKFPVYVLAQFIGAFLGAATVYGLYYDAINEFDGGNRTVTGPKATAGIFATYPAPHLSLWNGFFDQFIGTAMLVLCL 185 (316)
T ss_pred CChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEecCCccceEEEeecCchHhhhhHHHHHHHHHHHHHHhhe
Confidence 999999999999999999999999887632 111 122 46778999999999999999999999
Q ss_pred HHHhcCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCCcchhhhHHHHHccc----C-------CCcceeccchhhHHHH
Q 025864 154 YATIVDPKKGSIDGLGPLLTGFVVGANILAGGPFSGASMNPARSFGPALVSG----D-------WTDHWVYWVGPLIGGG 222 (247)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~----~-------~~~~wvy~v~p~~Ga~ 222 (247)
++ .+|+|++.+.++.|+.+|+.+.+...+.+.++|..+||||||+||++.. . -.++|+.|++|++|++
T Consensus 186 ~a-I~D~rN~~p~g~~p~~iG~lv~~Ig~s~G~N~GyaiNPARDlgPRlF~~~aGyG~~vF~~~~~~~WvPivgPl~Gai 264 (316)
T KOG0224|consen 186 FA-ITDKRNPIPTGLHPLVIGILVVAIGMSLGYNTGYAINPARDLGPRLFTSIAGYGPEVFSAGHNWWWVPIVGPLIGAI 264 (316)
T ss_pred eE-EecCCCCCCcchhHHHHHHHHHHHHHHhhcccCcccCcccccchHHHHHHHhcchhhcccCCceeeeeehhhhhhhh
Confidence 99 6999997788899999999999999999999999999999999999832 1 1578899999999999
Q ss_pred HHHHHHHHhhhcCcC
Q 025864 223 LAGFIYEHFFIVRSH 237 (247)
Q Consensus 223 ~a~~~~~~~~~~~~~ 237 (247)
+++++|++++.-+.+
T Consensus 265 ~G~~iY~~~Ig~h~~ 279 (316)
T KOG0224|consen 265 LGGWIYDFFIGFHIP 279 (316)
T ss_pred hhhhhheeeeeccCC
Confidence 999999999866555
No 12
>COG0580 GlpF Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=7.4e-46 Score=312.07 Aligned_cols=216 Identities=33% Similarity=0.478 Sum_probs=185.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccccc-cCCcchHHHHHHHHHHHHHHHHHHh-hcCCCCCchHHHHHHHHhcCcc
Q 025864 16 DCIKALVVEFITTFLFVFVGVGSAMAADKLV-GNALVGLFFVAVAHAFVVAVMISAG-HISGGHLNPAVTLGLLFGGHIT 93 (247)
Q Consensus 16 ~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~-~~~~~~~~~~~l~~g~~~~~~i~~~-~iSG~h~NPavTla~~l~g~~~ 93 (247)
+..|++++||+||++|+++++++........ ++...++..++++||+++.+.++.. ++||+|+|||||++.++.|+++
T Consensus 3 ~~~~~~~aEflGT~~Li~~G~G~~a~~~l~~~~~~~~~~~~i~~~wGl~V~~~iy~~g~iSGaHlNPAVTi~la~~g~fp 82 (241)
T COG0580 3 TLTKKLLAEFLGTFLLIFFGNGSVAAVALKGSKALGGGWLGIALAWGLGVLVAIYAFGGISGAHLNPAVTIALAVRGRFP 82 (241)
T ss_pred cHHHHHHHHHHHHHHHHHhhccHHHHHHhccccccccceeehhHHHHHHHHHHHHhccCcCccccChHHHHHHHHhCCCC
Confidence 4578889999999999999999887664332 3456678889999999999999999 9999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhCCC----C------CCeeecCCC-CchHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 025864 94 FFRSILYWIDQLLASSAACFLLSYLTGGL----S------TPVHTLASG-VGYFQGIIWEIILTFSLLFTVYATIVDPKK 162 (247)
Q Consensus 94 ~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~----~------~~~~~~~~~-~~~~~~~~~E~~~T~~l~~~v~~~~~~~~~ 162 (247)
|++.+.||++|++|+++|+.+++.++.+. + ...+++.|. .+..++++.|+++|++|++.++++.+|++.
T Consensus 83 ~~~v~~YivAQ~lGA~~ga~l~~~~~~~~~~~~~~~~~~~~g~~~t~p~~~~~~~~fl~E~v~T~~L~~~Ila~~~~~~~ 162 (241)
T COG0580 83 WRKVLPYIVAQVLGAFAGAALLYLLYYGKILETEGDPLASLGAFSTSPGGYSLGQAFLIEFVGTFVLVLGILALTDDGNA 162 (241)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhcCCchhhccccccCCCcccHHHHHHHHHHHHHHHHHHHHHhhccCcc
Confidence 99999999999999999999999887541 1 122344443 478999999999999999999996444443
Q ss_pred CCCCChhHHHHHHHHHHHHHhcCCCCCCCcchhhhHHHHHccc---------CCCcceeccchhhHHHHHHHHHHHHhhh
Q 025864 163 GSIDGLGPLLTGFVVGANILAGGPFSGASMNPARSFGPALVSG---------DWTDHWVYWVGPLIGGGLAGFIYEHFFI 233 (247)
Q Consensus 163 ~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~---------~~~~~wvy~v~p~~Ga~~a~~~~~~~~~ 233 (247)
.....|+.||+.+....++.++.||..+|||||+||++... +++|+|+||++|++|+++++++|+.++.
T Consensus 163 --~~~~apl~iGllv~~i~~s~g~~TG~aiNPARdlGprl~~~~~g~~~~~g~~~y~wipvigpiiGa~lg~~~~~~~~~ 240 (241)
T COG0580 163 --NAGFAPLAIGLLVTAIGLSLGPTTGTAINPARDLGPRLAHSLAGWAANKGDSSYFWIPVIGPIVGAILGALLYKLLLG 240 (241)
T ss_pred --cccchHHHHHHHHHHHHHHhcCCCCCccChHHHHHHHHHHHhcCcccCCCCCCeEeeeehHHHHHHHHHHHHHHHHcc
Confidence 34589999999999999999999999999999999999532 2258999999999999999999998754
No 13
>PLN00183 putative aquaporin NIP7; Provisional
Probab=100.00 E-value=1.6e-43 Score=306.07 Aligned_cols=221 Identities=28% Similarity=0.455 Sum_probs=187.5
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCcchHHHHHHHHHHHHHHHHHHh-hcCCCCCchHHHHHHHHhcC
Q 025864 13 TQPDCIKALVVEFITTFLFVFVGVGSAMAADKLVGNALVGLFFVAVAHAFVVAVMISAG-HISGGHLNPAVTLGLLFGGH 91 (247)
Q Consensus 13 ~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~-~iSG~h~NPavTla~~l~g~ 91 (247)
.+.+.+|++++||++|++++|+++++...... .....++..+++++|+++.+.++++ ++||+|+|||||+++++.|+
T Consensus 40 ~~~~~~~~~laEfigTfllvf~~~g~~~~~~~--~~~~~~~~~~al~~Gl~V~~~i~~~g~vSGah~NPAvTla~~l~g~ 117 (274)
T PLN00183 40 MDLNPARMVLAEMVGTFILMFCVCGIIASTQL--SGGEVGLLEYAATAGLTVVVVVFSIGSISGAHVNPSVTIAFATFGH 117 (274)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHhhccc--cCCccchHHHHHHHHHHHHHHHHHhhccCccccCHHHHHHHHHhcC
Confidence 34567899999999999999999987654321 1122356667899999999999999 99999999999999999999
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCeeecCCCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCChhHH
Q 025864 92 ITFFRSILYWIDQLLASSAACFLLSYLTGGLSTPVHTLASGVGYFQGIIWEIILTFSLLFTVYATIVDPKKGSIDGLGPL 171 (247)
Q Consensus 92 ~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~l~~~v~~~~~~~~~~~~~~~~~~ 171 (247)
++|.+.+.|+++|++|+++|+.+++.+++... ....+.+..+..++++.|+++|++|+++++.+ .++++. .+...++
T Consensus 118 i~~~~~~~Yi~aQ~lGa~~ga~l~~~~~~~~~-~~~~~~p~~~~~~~~~~E~v~T~iLv~~i~~~-~~~~~~-~~~~~~l 194 (274)
T PLN00183 118 FPWSKVPLYITAQTVGSVLATYVGVSVYGVKA-DLMTTKPAQGCSSAFWVEFIATFIVMFLAASL-TSQPQS-LGHLSGF 194 (274)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-ccccCCCcccHHHHHHHHHHHHHHHHHhhhee-eccccC-CCCceeh
Confidence 99999999999999999999999988876532 23334455677899999999999999999985 444322 3345789
Q ss_pred HHHHHHHHHHHhcCCCCCCCcchhhhHHHHHcccCCCcceeccchhhHHHHHHHHHHHHhhhcCcCC
Q 025864 172 LTGFVVGANILAGGPFSGASMNPARSFGPALVSGDWTDHWVYWVGPLIGGGLAGFIYEHFFIVRSHV 238 (247)
Q Consensus 172 ~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~~~~~~wvy~v~p~~Ga~~a~~~~~~~~~~~~~~ 238 (247)
.+|+.+++.+++.+++||+++||||+|+|++.+.+|+++|+||++|++|+++++++|+.++.+....
T Consensus 195 ~iGl~v~~~v~~~g~~TG~~~NPArtlgpai~~~~~~~~wvy~vapilGailaa~l~~~l~~~~~~~ 261 (274)
T PLN00183 195 VIGIAIGLAVLITGPVSGGSMNPARSLGPAIVSWDFKDIWIYITAPTIGAVAGALMFHLLRLRTQPC 261 (274)
T ss_pred HHHHHHHHHHHhccCCCCCEeCHHHHHHHHHhCCChhheehHHHHHHHHHHHHHHHHHHHhccCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999998766543
No 14
>cd00333 MIP Major intrinsic protein (MIP) superfamily. Members of the MIP superfamily function as membrane channels that selectively transport water, small neutral molecules, and ions out of and between cells. The channel proteins share a common fold: the N-terminal cytosolic portion followed by six transmembrane helices, which might have arisen through gene duplication. On the basis of sequence similarity and functional characteristics, the superfamily can be subdivided into two major groups: water-selective channels called aquaporins (AQPs) and glycerol uptake facilitators (GlpFs). AQPs are found in all three kingdoms of life, while GlpFs have been characterized only within microorganisms.
Probab=100.00 E-value=1.2e-42 Score=295.43 Aligned_cols=211 Identities=46% Similarity=0.750 Sum_probs=179.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccccCCcchHHHHHHHHHHHHHHHHHHh-hcCCCCCchHHHHHHHHhcCcchhHH
Q 025864 19 KALVVEFITTFLFVFVGVGSAMAADKLVGNALVGLFFVAVAHAFVVAVMISAG-HISGGHLNPAVTLGLLFGGHITFFRS 97 (247)
Q Consensus 19 ~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~-~iSG~h~NPavTla~~l~g~~~~~~~ 97 (247)
|++++||+||+++++.++++..... ..++...++..+++++|+++.+.++.+ ++||+|+|||+|++.++.|+++|.+.
T Consensus 1 r~~~~E~~gT~~lv~~~~~~~~~~~-~~~~~~~~~~~~~~~~gl~v~~~~~~~~~~sga~~NPa~t~~~~~~~~~~~~~~ 79 (228)
T cd00333 1 RKYLAEFLGTFLLVFFGCGSVLAVK-LAGGASGGLLGIALAWGFAIFVLVYAVGHISGGHINPAVTLALAVGGRFPLIRV 79 (228)
T ss_pred ChhhHHHHHHHHHHHHHhHHHhhcc-ccCCCCCcHHHHHHHHHHHHHHHHHHhccCCCCeEcHHHHHHHHHhCCCCHHHH
Confidence 5789999999999999999875432 222223456778999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCC----C------e--eecCCCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCC-C
Q 025864 98 ILYWIDQLLASSAACFLLSYLTGGLST----P------V--HTLASGVGYFQGIIWEIILTFSLLFTVYATIVDPKKG-S 164 (247)
Q Consensus 98 ~~yi~aQ~~Ga~~g~~~~~~~~~~~~~----~------~--~~~~~~~~~~~~~~~E~~~T~~l~~~v~~~~~~~~~~-~ 164 (247)
+.|+++|++|+++|+.+.+.++++... . . ..++++.+..++++.|+++|++|+++++.+ .++++. .
T Consensus 80 ~~y~~aq~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~v~T~~Lv~~i~~~-~~~~~~~~ 158 (228)
T cd00333 80 IPYIIAQLLGAILGAALLYGLYYGLYLEFLGANNIVAGIFGTYPSPGVSNGNAFFVEFIGTFILVLVVFAT-TDDPNGPP 158 (228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHhhcCCccccccceeccCCCCCccHHHHHHHHHHHHHHHHHHHHHH-ccccccCC
Confidence 999999999999999999888654211 1 1 123456789999999999999999999985 454432 2
Q ss_pred CCChhHHHHHHHHHHHHHhcCCCCCCCcchhhhHHHHHcccC---CCcceeccchhhHHHHHHHHHHHHh
Q 025864 165 IDGLGPLLTGFVVGANILAGGPFSGASMNPARSFGPALVSGD---WTDHWVYWVGPLIGGGLAGFIYEHF 231 (247)
Q Consensus 165 ~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~~---~~~~wvy~v~p~~Ga~~a~~~~~~~ 231 (247)
.....++.+|+.+.+.++..++.||+++|||||+++++.++. |+++|+||++|++|+++++++|+++
T Consensus 159 ~~~~~~~~iGl~v~~~~~~~g~~sG~~~NPAr~~g~~i~~~~~~~~~~~~vy~vap~lGai~aa~l~~~~ 228 (228)
T cd00333 159 PGGLAPLAIGLLVAAIGLAGGPITGASMNPARSLGPALFTGLARHWHYFWVYWVGPLIGAIAGALVYDYV 228 (228)
T ss_pred CCCcHHHHHHHHHHHHHHHhhcccccccCHhhchHHHHHhccccccceeehhhhHHHHHHHHHHHHHHhC
Confidence 345789999999999999999999999999999999999875 9999999999999999999999864
No 15
>TIGR00861 MIP MIP family channel proteins. processes. Some members of the family, including the yeast FPS protein (TC #1.A.8.5.1) and tobacco NtTIPA may transport both water and small solutes.
Probab=100.00 E-value=7.8e-41 Score=282.20 Aligned_cols=205 Identities=42% Similarity=0.703 Sum_probs=172.7
Q ss_pred HHHHHHHHHHHHHHHHHhhccccc--cC-CcchHHHHHHHHHHHHHHHHHHh-hcCCCCCchHHHHHHHHhcCcchhHHH
Q 025864 23 VEFITTFLFVFVGVGSAMAADKLV--GN-ALVGLFFVAVAHAFVVAVMISAG-HISGGHLNPAVTLGLLFGGHITFFRSI 98 (247)
Q Consensus 23 ~EfigT~~lv~~~~~~~~~~~~~~--~~-~~~~~~~~~l~~g~~~~~~i~~~-~iSG~h~NPavTla~~l~g~~~~~~~~ 98 (247)
+||+||++++++++++........ ++ .+.+...+++++|+++...++.. ++||+|+|||||++.++.|+++|.+.+
T Consensus 1 aEf~gT~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~Gl~v~~~~~~~~~~sg~h~NPavt~~~~l~~~~~~~~~~ 80 (216)
T TIGR00861 1 AEFLGTFLLVFFGVGSALGVNVAGAYGAVGGGQFLGVALAFGLAVATLVYCVGGISGAHLNPAVTIALLLGRRFPLKRVP 80 (216)
T ss_pred CcHHHHHHHHHHHHHHHHhhhcccccCCCCCcchHHHHHHHHHHHHHHHHHHhcccccccCHHHHHHHHHhCCCCHHHHH
Confidence 599999999999999876532211 11 11256788999999999999998 999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCC---Cee-ecCCCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCC-CCCChhHHHH
Q 025864 99 LYWIDQLLASSAACFLLSYLTGGLST---PVH-TLASGVGYFQGIIWEIILTFSLLFTVYATIVDPKKG-SIDGLGPLLT 173 (247)
Q Consensus 99 ~yi~aQ~~Ga~~g~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~E~~~T~~l~~~v~~~~~~~~~~-~~~~~~~~~i 173 (247)
.|+++|++|+++|+.+.+.++++... ... .++++.+..++++.|+++|++++++++.. .++++. ......++.+
T Consensus 81 ~y~~aQ~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~i~T~~lv~~~~~~-~~~~~~~~~~~~~~~~i 159 (216)
T TIGR00861 81 VYIVAQLIGAILGAALLYGLTSGLFPGNLAVNGSGAAGVSSGQAFFVEFIGTAILVLVIFAT-TDPRNRVPRGGFAPLAI 159 (216)
T ss_pred HHHHHHHHHHHHHHHHHHHHccccccCCccccCCCCCcccHHHHHHHHHHHHHHHHHHHhee-ecCCCCCCCCccHHHHH
Confidence 99999999999999999988765311 111 12345788999999999999999999984 554433 2233789999
Q ss_pred HHHHHHHHHhcCCCCCCCcchhhhHHHHHccc--CCCcceeccchhhHHHHHHHHHH
Q 025864 174 GFVVGANILAGGPFSGASMNPARSFGPALVSG--DWTDHWVYWVGPLIGGGLAGFIY 228 (247)
Q Consensus 174 g~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~--~~~~~wvy~v~p~~Ga~~a~~~~ 228 (247)
|+.+...++..+++||+++||||++++++.++ +|+++|+||++|++|+++++.+|
T Consensus 160 G~~v~~~~~~~g~~sG~~~NPAr~l~~~l~~~~~~~~~~~vy~vap~~Ga~~a~~~y 216 (216)
T TIGR00861 160 GLLVFLIHLSMGPYTGTGMNPARSLGPALFAGLAGWGNHWVYWVGPIIGAILGALVY 216 (216)
T ss_pred HHHHHHHHHhCCCCcccccCchhhhhHHHHhccccccceeHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999987 89999999999999999998865
No 16
>PLN00026 aquaporin NIP; Provisional
Probab=99.67 E-value=1.3e-16 Score=139.69 Aligned_cols=105 Identities=24% Similarity=0.296 Sum_probs=87.5
Q ss_pred CCCCchHHHHHHHHHHHHHHHHHHHHHhcCCCC-CCCCCh--hHHHHHHHHHHHHHhcCCCCCCCcchhhhHHHHHccc-
Q 025864 130 ASGVGYFQGIIWEIILTFSLLFTVYATIVDPKK-GSIDGL--GPLLTGFVVGANILAGGPFSGASMNPARSFGPALVSG- 205 (247)
Q Consensus 130 ~~~~~~~~~~~~E~~~T~~l~~~v~~~~~~~~~-~~~~~~--~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~- 205 (247)
.++.+.++.++.|+++|++|++++++....+++ ...... .++.+|+.+++.+++.+++||+|+||||++++++.+.
T Consensus 65 ~~~~~~~r~~laEfiGTflLvf~g~~~~~~~~~~~~~~~~~~ial~~GlaV~~~i~~~g~ISGaHlNPAVTla~al~g~~ 144 (298)
T PLN00026 65 PPDVSLTRKLGAEFVGTFILIFAATAGPIVNQKYDGAETLIGNAACAGLAVMIVILSTGHISGAHLNPSLTIAFAALRHF 144 (298)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHhccccCCccchHHHHHHHHHHHHHHHHHhhccCccccCHHHHHHHHHhCCC
Confidence 345678899999999999999999874332211 111122 3578999999999999999999999999999999876
Q ss_pred CCCcceeccchhhHHHHHHHHHHHHhhhc
Q 025864 206 DWTDHWVYWVGPLIGGGLAGFIYEHFFIV 234 (247)
Q Consensus 206 ~~~~~wvy~v~p~~Ga~~a~~~~~~~~~~ 234 (247)
+|.+.|+||++|++|+++|+++++.++.+
T Consensus 145 ~~~~~~~YiiaQilGAi~aa~~~~~~~~~ 173 (298)
T PLN00026 145 PWKHVPAYIAAQVSASICASFALKGVFHP 173 (298)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 79999999999999999999999998765
No 17
>PLN00184 aquaporin NIP1; Provisional
Probab=99.67 E-value=2.1e-16 Score=138.43 Aligned_cols=103 Identities=26% Similarity=0.328 Sum_probs=85.4
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHhcCCC-CCCCCCh--hHHHHHHHHHHHHHhcCCCCCCCcchhhhHHHHHccc-CC
Q 025864 132 GVGYFQGIIWEIILTFSLLFTVYATIVDPK-KGSIDGL--GPLLTGFVVGANILAGGPFSGASMNPARSFGPALVSG-DW 207 (247)
Q Consensus 132 ~~~~~~~~~~E~~~T~~l~~~v~~~~~~~~-~~~~~~~--~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~-~~ 207 (247)
+.+..+.++.|+++|++|++++++...... +...... .++.+|+.+++.+++.+++||+|+||||++++++.+. +|
T Consensus 50 ~~~~~~~~~aEfiGTflLvf~g~g~~~~~~~~~~~~~~~~iai~~Gl~v~~~i~~~g~iSGaH~NPAVTla~al~g~~~~ 129 (296)
T PLN00184 50 SVPFLQKLIAEVLGTYFLVFTGCASVVVNMQNDNVVTLPGIAIVWGLTIMVLIYSLGHISGAHINPAVTIAFASCGRFPL 129 (296)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCccccHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHhCCCCH
Confidence 345789999999999999999988543221 1111223 3556699999999999999999999999999999887 89
Q ss_pred CcceeccchhhHHHHHHHHHHHHhhhc
Q 025864 208 TDHWVYWVGPLIGGGLAGFIYEHFFIV 234 (247)
Q Consensus 208 ~~~wvy~v~p~~Ga~~a~~~~~~~~~~ 234 (247)
.+.|+||++|++|+++|+++++.++..
T Consensus 130 ~~~~~YiiaQllGA~lga~~~~~l~~~ 156 (296)
T PLN00184 130 KQVPAYVISQVIGSTLAAATLRLLFGL 156 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999999998754
No 18
>PLN00167 aquaporin TIP5; Provisional
Probab=99.59 E-value=7.2e-15 Score=126.64 Aligned_cols=103 Identities=17% Similarity=0.321 Sum_probs=86.4
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHhcCCCC----CC----CCChhHHHHHHHHHHHHHhcCCCCCCCcchhhhHHHHHc
Q 025864 132 GVGYFQGIIWEIILTFSLLFTVYATIVDPKK----GS----IDGLGPLLTGFVVGANILAGGPFSGASMNPARSFGPALV 203 (247)
Q Consensus 132 ~~~~~~~~~~E~~~T~~l~~~v~~~~~~~~~----~~----~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~ 203 (247)
..+.++.++.|+++|++|+++.++...+.+. .+ .....++.+|+.+.+.+++.+++||+|+|||+++++.+.
T Consensus 18 ~~~~~~~~laEflgTf~lv~~~~g~~~~~~~~~~~~~~~~~~~~~i~l~~Gl~v~~~i~~~g~iSGah~NPAvtl~~~~~ 97 (256)
T PLN00167 18 TRNALRSYLAEFISTFFFVFAAVGSAMSSRKLMPDAASDPSSLLIVAIANAFALSSAVYIAANISGGHVNPAVTFGMAVG 97 (256)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccCCCCcchHHHHHHHHHHHHHHHHhhcccccccCHHHHHHHHHh
Confidence 3467899999999999999999886543221 11 112478999999999999999999999999999999998
Q ss_pred cc-CCCcceeccchhhHHHHHHHHHHHHhhhc
Q 025864 204 SG-DWTDHWVYWVGPLIGGGLAGFIYEHFFIV 234 (247)
Q Consensus 204 ~~-~~~~~wvy~v~p~~Ga~~a~~~~~~~~~~ 234 (247)
+. .|.+.|+||++|++|+++++.+++.++..
T Consensus 98 g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~ 129 (256)
T PLN00167 98 GHISVPTAMFYWISQMLASVMACLFLKVTTVG 129 (256)
T ss_pred CCCcHhhhhHHHHHHHHHHHHHHHHHHHhhcc
Confidence 76 79999999999999999999999887543
No 19
>PLN00183 putative aquaporin NIP7; Provisional
Probab=99.58 E-value=9.4e-15 Score=126.88 Aligned_cols=112 Identities=20% Similarity=0.319 Sum_probs=89.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCcchHHHHHHHHHHHHHHHHHHh-hcCCCCCchHHHHHHHHhcCcch
Q 025864 16 DCIKALVVEFITTFLFVFVGVGSAMAADKLVGNALVGLFFVAVAHAFVVAVMISAG-HISGGHLNPAVTLGLLFGGHITF 94 (247)
Q Consensus 16 ~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~-~iSG~h~NPavTla~~l~g~~~~ 94 (247)
+.++.++.|+++|+++++.+++...... +... ..++.+|+.+.+.+++. ++||+|+|||+|++.++.+ .+|
T Consensus 159 ~~~~~~~~E~v~T~iLv~~i~~~~~~~~-----~~~~--~~~l~iGl~v~~~v~~~g~~TG~~~NPArtlgpai~~-~~~ 230 (274)
T PLN00183 159 GCSSAFWVEFIATFIVMFLAASLTSQPQ-----SLGH--LSGFVIGIAIGLAVLITGPVSGGSMNPARSLGPAIVS-WDF 230 (274)
T ss_pred cHHHHHHHHHHHHHHHHHhhheeecccc-----CCCC--ceehHHHHHHHHHHHhccCCCCCEeCHHHHHHHHHhC-CCh
Confidence 4678999999999999999887643221 1111 23578899999988888 9999999999999999987 489
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCeeecCCCCch
Q 025864 95 FRSILYWIDQLLASSAACFLLSYLTGGLSTPVHTLASGVGY 135 (247)
Q Consensus 95 ~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~~~ 135 (247)
.+.|+|+++|++|+++|+.+.+.+..+........+|+.|.
T Consensus 231 ~~~wvy~vapilGailaa~l~~~l~~~~~~~~~~~~~~~~~ 271 (274)
T PLN00183 231 KDIWIYITAPTIGAVAGALMFHLLRLRTQPCSPNSSPNTSL 271 (274)
T ss_pred hheehHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCchhh
Confidence 99999999999999999999999987655444444555543
No 20
>PLN00166 aquaporin TIP2; Provisional
Probab=99.57 E-value=6.2e-15 Score=126.71 Aligned_cols=101 Identities=18% Similarity=0.300 Sum_probs=84.5
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHhcCC--C-C-CC--CCC--hhHHHHHHHHHHHHHhcCCCCCCCcchhhhHHHHHcc
Q 025864 133 VGYFQGIIWEIILTFSLLFTVYATIVDP--K-K-GS--IDG--LGPLLTGFVVGANILAGGPFSGASMNPARSFGPALVS 204 (247)
Q Consensus 133 ~~~~~~~~~E~~~T~~l~~~v~~~~~~~--~-~-~~--~~~--~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~ 204 (247)
.+..++++.|+++|++|+++.+++..+. . + .. ... ..++.+|+.+++.+++.+++||+|+||||++++++.+
T Consensus 15 ~~~~~~~~aEfigTf~lv~~g~g~~~~~~~~~~~~~~~~~~~~~ial~~Gl~v~~~i~~~g~iSGah~NPAvt~~~~l~g 94 (250)
T PLN00166 15 VASLKAYLSEFIATLLFVFAGVGSAIAFAKLTSDAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAIGG 94 (250)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCccHHHHHHHHHHHHHHHHHHhcccccccCHHHHHHHHHhC
Confidence 4667899999999999999999864431 1 1 10 112 3567799999999999999999999999999999986
Q ss_pred c-CCCcceeccchhhHHHHHHHHHHHHhhh
Q 025864 205 G-DWTDHWVYWVGPLIGGGLAGFIYEHFFI 233 (247)
Q Consensus 205 ~-~~~~~wvy~v~p~~Ga~~a~~~~~~~~~ 233 (247)
. +|.+.|+||++|++|+++++.+++.++.
T Consensus 95 ~~~~~~~~~y~~aq~lGa~~~a~~~~~~~~ 124 (250)
T PLN00166 95 NITIITGFFYWIAQCLGSIVACLLLVFVTN 124 (250)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 5 6889999999999999999999998864
No 21
>cd00333 MIP Major intrinsic protein (MIP) superfamily. Members of the MIP superfamily function as membrane channels that selectively transport water, small neutral molecules, and ions out of and between cells. The channel proteins share a common fold: the N-terminal cytosolic portion followed by six transmembrane helices, which might have arisen through gene duplication. On the basis of sequence similarity and functional characteristics, the superfamily can be subdivided into two major groups: water-selective channels called aquaporins (AQPs) and glycerol uptake facilitators (GlpFs). AQPs are found in all three kingdoms of life, while GlpFs have been characterized only within microorganisms.
Probab=99.56 E-value=1.2e-14 Score=123.65 Aligned_cols=99 Identities=26% Similarity=0.391 Sum_probs=83.0
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCcchHHHHHHHHHHHHHHHHHHh-hcCCCCCchHHHHHHHHhcCc
Q 025864 14 QPDCIKALVVEFITTFLFVFVGVGSAMAADKLVGNALVGLFFVAVAHAFVVAVMISAG-HISGGHLNPAVTLGLLFGGHI 92 (247)
Q Consensus 14 ~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~-~iSG~h~NPavTla~~l~g~~ 92 (247)
+.+.+|.++.|+++|+++++.++........ ..+....++.+|+.+...++.. ++||+|+|||+|++..+.++.
T Consensus 126 ~~~~~~~~~~E~v~T~~Lv~~i~~~~~~~~~-----~~~~~~~~~~iGl~v~~~~~~~g~~sG~~~NPAr~~g~~i~~~~ 200 (228)
T cd00333 126 GVSNGNAFFVEFIGTFILVLVVFATTDDPNG-----PPPGGLAPLAIGLLVAAIGLAGGPITGASMNPARSLGPALFTGL 200 (228)
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHcccccc-----CCCCCcHHHHHHHHHHHHHHHhhcccccccCHhhchHHHHHhcc
Confidence 4478899999999999999999876532211 1122245788999999999988 999999999999999999987
Q ss_pred --chhHHHHHHHHHHHHHHHHHHHHHH
Q 025864 93 --TFFRSILYWIDQLLASSAACFLLSY 117 (247)
Q Consensus 93 --~~~~~~~yi~aQ~~Ga~~g~~~~~~ 117 (247)
+|.+.|+|+++|++|+++|+.+.+.
T Consensus 201 ~~~~~~~~vy~vap~lGai~aa~l~~~ 227 (228)
T cd00333 201 ARHWHYFWVYWVGPLIGAIAGALVYDY 227 (228)
T ss_pred ccccceeehhhhHHHHHHHHHHHHHHh
Confidence 7999999999999999999998764
No 22
>PLN00182 putative aquaporin NIP4; Provisional
Probab=99.56 E-value=1.1e-14 Score=127.02 Aligned_cols=102 Identities=25% Similarity=0.250 Sum_probs=85.1
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHhcCCCCC-CCCCh--hHHHHHHHHHHHHHhcCCCCCCCcchhhhHHHHHccc-CC
Q 025864 132 GVGYFQGIIWEIILTFSLLFTVYATIVDPKKG-SIDGL--GPLLTGFVVGANILAGGPFSGASMNPARSFGPALVSG-DW 207 (247)
Q Consensus 132 ~~~~~~~~~~E~~~T~~l~~~v~~~~~~~~~~-~~~~~--~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~-~~ 207 (247)
..+..+.++.|+++|++|+++.++++...+.. ..... ..+.+|+.+.+.+++.+++||+|+|||++++.++.+. +|
T Consensus 38 ~~~~~~~~~aEflgTflLvf~g~g~~~~~~~~~~~~~~~~iala~Gl~v~~~i~~~g~iSGah~NPAVTla~~~~~~~~~ 117 (283)
T PLN00182 38 IVCLTQKLIAEMIGTYFIIFSGCGVVVVNVLYGGTITFPGICVTWGLIVMVMIYSTGHISGAHFNPAVTVTFAIFRRFPW 117 (283)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcchHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHHcCCCH
Confidence 34677999999999999999998854432211 11122 3557899999999999999999999999999999987 89
Q ss_pred CcceeccchhhHHHHHHHHHHHHhhh
Q 025864 208 TDHWVYWVGPLIGGGLAGFIYEHFFI 233 (247)
Q Consensus 208 ~~~wvy~v~p~~Ga~~a~~~~~~~~~ 233 (247)
.+.|+||++|++|+++|+++.+.++.
T Consensus 118 ~~~~~Yi~aQ~lGa~~ga~~~~~~~~ 143 (283)
T PLN00182 118 YQVPLYIGAQLTGSLLASLTLRLMFN 143 (283)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999988874
No 23
>PLN00027 aquaporin TIP; Provisional
Probab=99.54 E-value=2.5e-14 Score=123.22 Aligned_cols=99 Identities=21% Similarity=0.360 Sum_probs=82.6
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhc------CCCCCCCCC--hhHHHHHHHHHHHHHhcCCCCCCCcchhhhHHHHHccc
Q 025864 134 GYFQGIIWEIILTFSLLFTVYATIV------DPKKGSIDG--LGPLLTGFVVGANILAGGPFSGASMNPARSFGPALVSG 205 (247)
Q Consensus 134 ~~~~~~~~E~~~T~~l~~~v~~~~~------~~~~~~~~~--~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~ 205 (247)
+..+.++.|+++|++|+++.++... ++++..... ..++.+|+.+.+.+++.++.||+|+||||++++.+.++
T Consensus 18 ~~~~~~~aEfigTf~lv~~g~g~~~~~~~~~~~~~~~~~~~l~~~l~~Gl~v~~~i~~~~~iSGah~NPAvtl~~~~~g~ 97 (252)
T PLN00027 18 DALKAALAEFISTLIFVFAGEGSGMAFNKLTDNGSTTPAGLVAAALAHAFALFVAVSVGANISGGHVNPAVTFGAFIGGN 97 (252)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCcchHHHHHHHHHHHHHHHHHHcccCccccChHHHHHHHHhCC
Confidence 4678999999999999999887532 111111112 46889999999999999999999999999999998765
Q ss_pred -CCCcceeccchhhHHHHHHHHHHHHhh
Q 025864 206 -DWTDHWVYWVGPLIGGGLAGFIYEHFF 232 (247)
Q Consensus 206 -~~~~~wvy~v~p~~Ga~~a~~~~~~~~ 232 (247)
+|.+.|+||++|++|+++++.+++.+.
T Consensus 98 ~~~~~~~~yi~aQ~lGa~~ga~~~~~~~ 125 (252)
T PLN00027 98 ITLLRGILYWIAQLLGSVVACLLLKFST 125 (252)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 688999999999999999999998775
No 24
>PRK05420 aquaporin Z; Provisional
Probab=99.53 E-value=2.6e-14 Score=121.59 Aligned_cols=99 Identities=24% Similarity=0.183 Sum_probs=81.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCC--CCCCCCh--hHHHHHHHHHHHHHhcCCCCCCCcchhhhHHHHHccc-CCCcc
Q 025864 136 FQGIIWEIILTFSLLFTVYATIVDPK--KGSIDGL--GPLLTGFVVGANILAGGPFSGASMNPARSFGPALVSG-DWTDH 210 (247)
Q Consensus 136 ~~~~~~E~~~T~~l~~~v~~~~~~~~--~~~~~~~--~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~-~~~~~ 210 (247)
.|.++.|+++|++|+++.+......+ +...... .++.+|+.+.+.+++.+++||+|+|||+++++.+.+. +|.+.
T Consensus 2 ~~~~laEfigT~~lv~~g~~~~~~~~~~~~~~~~~~~ial~~Gl~v~~~i~~~g~iSG~h~NPAvtl~~~~~~~i~~~~~ 81 (231)
T PRK05420 2 FKKLAAEFFGTFWLVFGGCGSAVLAAAFPELGIGFLGVALAFGLTVLTMAYAVGHISGGHFNPAVSVGLWAGGRFPAKEL 81 (231)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHhhcccCCCCCchHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHhCCCCHHHh
Confidence 47899999999999998877533211 1111122 4788999999999999999999999999999999976 79999
Q ss_pred eeccchhhHHHHHHHHHHHHhhhc
Q 025864 211 WVYWVGPLIGGGLAGFIYEHFFIV 234 (247)
Q Consensus 211 wvy~v~p~~Ga~~a~~~~~~~~~~ 234 (247)
|+||++|++|+++|+.+.+.++.+
T Consensus 82 ~~Y~~aQ~lGa~~ga~l~~~~~~~ 105 (231)
T PRK05420 82 VPYIIAQVVGGIAAAAVLYLIASG 105 (231)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999999877776643
No 25
>PTZ00016 aquaglyceroporin; Provisional
Probab=99.52 E-value=2.2e-14 Score=125.96 Aligned_cols=102 Identities=22% Similarity=0.279 Sum_probs=85.0
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhcCCCC-CCCCC--hhHHHHHHHHHHHHHhcCCCCCCCcchhhhHHHHHccc-CCCc
Q 025864 134 GYFQGIIWEIILTFSLLFTVYATIVDPKK-GSIDG--LGPLLTGFVVGANILAGGPFSGASMNPARSFGPALVSG-DWTD 209 (247)
Q Consensus 134 ~~~~~~~~E~~~T~~l~~~v~~~~~~~~~-~~~~~--~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~-~~~~ 209 (247)
+..+.++.|+++|++++++.++...+... ..... ..++.+|+.+.+.+++.+++||+|+|||+++++++.+. +|.+
T Consensus 48 ~~~~~~laEfigT~llvf~g~g~~~~~~~~~~~~~~~~ial~~Glav~~~i~~~g~iSG~h~NPAVTla~~l~g~i~~~~ 127 (294)
T PTZ00016 48 PNVREYVAEFLGTFVLLFFGEGVVATTHTVGNNGDYLAITIGWGLGVTFGLLVSAGISGGHLNPAVTLGNAVFGKFPWKK 127 (294)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcHHHHHHHHHHHHHHHHHhcccCcCccCHHHHHHHHHhccCCHHH
Confidence 45689999999999999998885433211 11112 35678899999999999999999999999999999988 8999
Q ss_pred ceeccchhhHHHHHHHHHHHHhhhcC
Q 025864 210 HWVYWVGPLIGGGLAGFIYEHFFIVR 235 (247)
Q Consensus 210 ~wvy~v~p~~Ga~~a~~~~~~~~~~~ 235 (247)
.|.||++|++|+++|+.+.+.++.+.
T Consensus 128 ~~~YiiaQ~lGa~~ga~ll~~~~~~~ 153 (294)
T PTZ00016 128 LPGYFVAQLLGAFVGAACVYGLYYGF 153 (294)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 99999999999999999988887653
No 26
>COG0580 GlpF Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism]
Probab=99.46 E-value=2.1e-13 Score=115.49 Aligned_cols=107 Identities=21% Similarity=0.193 Sum_probs=87.4
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhcC----CCCCC-CC-ChhHHHHHHHHHHHHHhcCCCCCCCcchhhhHHHHHccc-C
Q 025864 134 GYFQGIIWEIILTFSLLFTVYATIVD----PKKGS-ID-GLGPLLTGFVVGANILAGGPFSGASMNPARSFGPALVSG-D 206 (247)
Q Consensus 134 ~~~~~~~~E~~~T~~l~~~v~~~~~~----~~~~~-~~-~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~-~ 206 (247)
+..+.++.|+++|++|++...+.... +.+.. .+ ....+.+|+.|.+.+++.+++||+|+|||++++.++.++ +
T Consensus 3 ~~~~~~~aEflGT~~Li~~G~G~~a~~~l~~~~~~~~~~~~i~~~wGl~V~~~iy~~g~iSGaHlNPAVTi~la~~g~fp 82 (241)
T COG0580 3 TLTKKLLAEFLGTFLLIFFGNGSVAAVALKGSKALGGGWLGIALAWGLGVLVAIYAFGGISGAHLNPAVTIALAVRGRFP 82 (241)
T ss_pred cHHHHHHHHHHHHHHHHHhhccHHHHHHhccccccccceeehhHHHHHHHHHHHHhccCcCccccChHHHHHHHHhCCCC
Confidence 34567899999999999976554221 11111 11 236788999999999999999999999999999999987 8
Q ss_pred CCcceeccchhhHHHHHHHHHHHHhhhcCcCCCC
Q 025864 207 WTDHWVYWVGPLIGGGLAGFIYEHFFIVRSHVPI 240 (247)
Q Consensus 207 ~~~~wvy~v~p~~Ga~~a~~~~~~~~~~~~~~~~ 240 (247)
|++...|+++|++|+++++.+...++.++..+.+
T Consensus 83 ~~~v~~YivAQ~lGA~~ga~l~~~~~~~~~~~~~ 116 (241)
T COG0580 83 WRKVLPYIVAQVLGAFAGAALLYLLYYGKILETE 116 (241)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhc
Confidence 9999999999999999999999889888776655
No 27
>TIGR00861 MIP MIP family channel proteins. processes. Some members of the family, including the yeast FPS protein (TC #1.A.8.5.1) and tobacco NtTIPA may transport both water and small solutes.
Probab=99.45 E-value=1.4e-13 Score=116.15 Aligned_cols=95 Identities=24% Similarity=0.186 Sum_probs=80.5
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCC----CC----CChhHHHHHHHHHHHHHhcCCCCCCCcchhhhHHHHHccc-CCCcce
Q 025864 141 WEIILTFSLLFTVYATIVDPKKG----SI----DGLGPLLTGFVVGANILAGGPFSGASMNPARSFGPALVSG-DWTDHW 211 (247)
Q Consensus 141 ~E~~~T~~l~~~v~~~~~~~~~~----~~----~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~-~~~~~w 211 (247)
.|+++|++++++.+.+..+.+.. .. ....++.+|+.+...+++.++.||+|+|||+++++.+.++ +|.+.|
T Consensus 1 aEf~gT~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~Gl~v~~~~~~~~~~sg~h~NPavt~~~~l~~~~~~~~~~ 80 (216)
T TIGR00861 1 AEFLGTFLLVFFGVGSALGVNVAGAYGAVGGGQFLGVALAFGLAVATLVYCVGGISGAHLNPAVTIALLLGRRFPLKRVP 80 (216)
T ss_pred CcHHHHHHHHHHHHHHHHhhhcccccCCCCCcchHHHHHHHHHHHHHHHHHHhcccccccCHHHHHHHHHhCCCCHHHHH
Confidence 49999999999999876552111 11 1236788999999999999999999999999999999987 899999
Q ss_pred eccchhhHHHHHHHHHHHHhhhcC
Q 025864 212 VYWVGPLIGGGLAGFIYEHFFIVR 235 (247)
Q Consensus 212 vy~v~p~~Ga~~a~~~~~~~~~~~ 235 (247)
+||++|++|+++++.+++.++.++
T Consensus 81 ~y~~aQ~~Ga~~~~~~~~~~~~~~ 104 (216)
T TIGR00861 81 VYIVAQLIGAILGAALLYGLTSGL 104 (216)
T ss_pred HHHHHHHHHHHHHHHHHHHHcccc
Confidence 999999999999999999887664
No 28
>KOG0223 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=99.42 E-value=1.2e-13 Score=117.13 Aligned_cols=103 Identities=24% Similarity=0.328 Sum_probs=87.1
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCcchHHHHHHHHHHHHHHHHHHh-hcCCCCCchHHHHHHHHh
Q 025864 11 EATQPDCIKALVVEFITTFLFVFVGVGSAMAADKLVGNALVGLFFVAVAHAFVVAVMISAG-HISGGHLNPAVTLGLLFG 89 (247)
Q Consensus 11 ~~~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~-~iSG~h~NPavTla~~l~ 89 (247)
...+.+..|.++.|++.||.+|+..++...... .+ ...++.+|+.+.+.+.++ ++||+++|||+|++.++.
T Consensus 125 ~~~~~~~~q~~~~E~ilTf~Lv~~v~~~a~d~~-------~~-~~a~l~IG~~v~~~~l~~g~~TG~sMNPArSfGpAvv 196 (238)
T KOG0223|consen 125 LAPGLSTGQGLVIEIILTFILVFTVFATATDPR-------RS-ELAPLAIGFSVGLNILAAGPFTGASMNPARSFGPAVV 196 (238)
T ss_pred cCCCCCcchhHHHHHHHHHHHhheeEEEeecCC-------Cc-ccHHHHHHHHHHHHHHeecCcCcCccCcHHHhhHHHH
Confidence 344557789999999999999999876332111 11 456799999999999999 999999999999999998
Q ss_pred cCcchhHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 025864 90 GHITFFRSILYWIDQLLASSAACFLLSYLTGGL 122 (247)
Q Consensus 90 g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~ 122 (247)
.+ +|.+.|+||++|++|+++++++.+.+..++
T Consensus 197 ~~-~w~~hwiYwvgP~~Ga~~a~~~y~~v~~~~ 228 (238)
T KOG0223|consen 197 YG-SWDDHWIYWVGPLLGAILAALIYRLVFIPD 228 (238)
T ss_pred hc-CCCcEEEEEhhHHHHHHHHHHHHHHhccCc
Confidence 87 499999999999999999999999987664
No 29
>KOG0224 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=99.40 E-value=2.8e-13 Score=116.40 Aligned_cols=105 Identities=21% Similarity=0.288 Sum_probs=86.1
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhcCC--CCCCCCC--hhHHHHHHHHHHHHHhcCCCCCCCcchhhhHHHHHccc-CCC
Q 025864 134 GYFQGIIWEIILTFSLLFTVYATIVDP--KKGSIDG--LGPLLTGFVVGANILAGGPFSGASMNPARSFGPALVSG-DWT 208 (247)
Q Consensus 134 ~~~~~~~~E~~~T~~l~~~v~~~~~~~--~~~~~~~--~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~-~~~ 208 (247)
...|.+++||++|++|++..++..... .+.+.+. ...+.+|+.++..++.++.+||+|+|||++++..++++ .|.
T Consensus 30 ~l~Re~LAEFlGT~vL~~~G~g~v~Q~vls~g~~g~~~~vnlgwg~av~~gVyvag~iSGgHlNPAVS~a~~~~g~~p~~ 109 (316)
T KOG0224|consen 30 ELLREFLAEFLGTFVLVVFGLGSVAQAVLSGGTGGSFIGVNLGWGFAVMMGVYVAGRISGGHLNPAVSLAMCILGRLPWK 109 (316)
T ss_pred HHHHHHHHHHHhHHHHHhhccceeEEEEeccCCCCceEEEEehHhHHHHHHHHhhccccccccCHHHHHHHHHhcCCChh
Confidence 578899999999999999877743321 1112222 34678899999999999999999999999999999987 899
Q ss_pred cceeccchhhHHHHHHHHHHHHhhhcCcCC
Q 025864 209 DHWVYWVGPLIGGGLAGFIYEHFFIVRSHV 238 (247)
Q Consensus 209 ~~wvy~v~p~~Ga~~a~~~~~~~~~~~~~~ 238 (247)
++.+|.++|++|+++|+.....+|.+...+
T Consensus 110 k~p~Y~~aQ~iGAF~gaa~~y~~y~d~i~~ 139 (316)
T KOG0224|consen 110 KFPVYVLAQFIGAFLGAATVYGLYYDAINE 139 (316)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999998887777655443
No 30
>PF00230 MIP: Major intrinsic protein; InterPro: IPR000425 A number of transmembrane (TM) channel proteins can be grouped together on the basis of sequence similarities [, , , , ]. These include: Mammalian major intrinsic protein (MIP). MIP is the major component of lens fibre gap junctions. Mammalian aquaporins []. These proteins form water- specific channels that provide the plasma membranes of red cells and kidney prox imal and collecting tubules with high permeability to water, thereby permitting water to move in the direction of an osmotic gradient. Soybean nodulin-26, a major component of the peribacteroid membrane induced during nodulation in legume roots after Rhizobium infection. Plants tonoplast intrinsic proteins (TIP). There are various isoforms of TIP : alpha (seed), gamma, Rt (root), and Wsi (water-stress induced). These proteins may allow the diffusion of water, amino acids and/or peptides from the tonoplas t interior to the cytoplasm. Bacterial glycerol facilitator protein (gene glpF), which facilitates the mo vement of glycerol across the cytoplasmic membrane. Salmonella typhimurium propanediol diffusion fac ilitator (gene pduF). Yeast FPS1, a glycerol uptake/efflux facilitator protein. Drosophila neurogenic protein 'big brain' (bib). This protein may mediate in tercellular communication; it may functions by allowing the transport of certain molecules(s) and thereby sending a signal for an exodermal cell to become an ep idermoblast instead of a neuroblast. Yeast hypothetical protein YFL054c. A hypothetical protein from the pepX region of Lactococcus lactis. The structures of various members of the MIP family have been determined by means of X-ray diffraction [, , ], revealing the fold to comprise a right-handed bundle of 6 transmembrane (TM) alpha-helices [, , ]. Similarities in the N-and C-terminal halves of the molecule suggest that the proteins may have arisen through tandem, intragenic duplication of an ancestral protein that contained 3 TM domains []. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins []. Aquaporin-CHIP (Aquaporin 1) belongs to the Colton blood group system and is associated with Co(a/b) antigen.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3NE2_A 2C32_A 1YMG_A 2B6P_A 3C02_A 2B5F_D 3CN6_A 3CN5_A 1Z98_M 3CLL_A ....
Probab=99.18 E-value=1.6e-10 Score=98.11 Aligned_cols=100 Identities=27% Similarity=0.376 Sum_probs=77.9
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCcchHHHHHHHHHHHHHHHHHHh-hcCCCCCchHHHHHHHH
Q 025864 10 REATQPDCIKALVVEFITTFLFVFVGVGSAMAADKLVGNALVGLFFVAVAHAFVVAVMISAG-HISGGHLNPAVTLGLLF 88 (247)
Q Consensus 10 ~~~~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~-~iSG~h~NPavTla~~l 88 (247)
.+..+.+..+.++.|+++|+++++........... ....+ ..++.+|+.+....... +.||+.+|||++++..+
T Consensus 127 ~~~~~~s~~~~~~~E~~~t~il~~~i~~~~~~~~~---~~~~~--~~p~~ig~~v~~~~~~~~~~tG~~~NPAr~~g~~l 201 (227)
T PF00230_consen 127 TPPPGISLGQAFFSEFIGTFILVLVILAVADDKRK---FPLGP--LAPLAIGLTVGALVLAGGPYTGASLNPARALGPAL 201 (227)
T ss_dssp GSTTTSSHHHHHHHHHHHHHHHHHHHHHHTSTTSS---STSSG--GHHHHHHHHHHHHHHHHHHHHST-SSHHHHHHHHH
T ss_pred cccccchhhhhhhhhhhhhhHHHhhhhhhcccccc---ccccc--ccceeEEEEEeecccccccccccccCchhhcCcee
Confidence 34445678999999999999999988766533221 11112 24577888888888877 99999999999999988
Q ss_pred hcCcchhHHHHHHHHHHHHHHHHHHHH
Q 025864 89 GGHITFFRSILYWIDQLLASSAACFLL 115 (247)
Q Consensus 89 ~g~~~~~~~~~yi~aQ~~Ga~~g~~~~ 115 (247)
.... |...|+|+++|++|+++|+.++
T Consensus 202 ~~~~-~~~~wvy~~~P~~Ga~~a~~~Y 227 (227)
T PF00230_consen 202 FSGI-WDYFWVYWVGPFIGAILAALLY 227 (227)
T ss_dssp HHTH-HTTTTHHHHHHHHHHHHHHHHH
T ss_pred eccc-CCeEEEEEehHHHHHHHHHhhC
Confidence 8774 8999999999999999998763
No 31
>PRK11562 nitrite transporter NirC; Provisional
Probab=90.51 E-value=11 Score=32.88 Aligned_cols=99 Identities=10% Similarity=0.117 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHHHHHHHh--hcCCCCCchHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHHHHHHHhC---CCCCC---
Q 025864 54 FFVAVAHAFVVAVMISAG--HISGGHLNPAVTLGLLFGGHITFFRSILYWIDQLLASSAACFLLSYLTG---GLSTP--- 125 (247)
Q Consensus 54 ~~~~l~~g~~~~~~i~~~--~iSG~h~NPavTla~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~---~~~~~--- 125 (247)
+..+..+++++.+.+... =.|| |-.......+.||.++++.+--|.-=.+|-++|+.+.-++.. +...+
T Consensus 59 li~g~~F~~GLilVi~~G~eLFTg---n~~~~~~~~~~~~~s~~~~lr~w~iv~~GNliGa~~~A~l~~~~~~~~~~~~~ 135 (268)
T PRK11562 59 LVMGATFGIALTLVIIAGSELFTG---HTMFLTFGVKAGTISHGQMWAILPQTWLGNLVGSVFVALLYSWGGGSLLPVDT 135 (268)
T ss_pred HHHHHHHHHHHHHHHHhCcccccc---chHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchh
Confidence 334556666666665554 3333 333333456678889888887777777777777776554431 11110
Q ss_pred ee-----ecCCCCchHHHHHHHHHHHHHHHHHHHH
Q 025864 126 VH-----TLASGVGYFQGIIWEIILTFSLLFTVYA 155 (247)
Q Consensus 126 ~~-----~~~~~~~~~~~~~~E~~~T~~l~~~v~~ 155 (247)
.. .-.-+.+..+.|+-=.+|-++..+.+..
T Consensus 136 ~~~~~ia~~K~~~~~~~~f~~gI~CNwLVclavw~ 170 (268)
T PRK11562 136 SIVHSVALAKTTAPAMVLFFKGALCNWLVCLAIWM 170 (268)
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 00 0011234566666666777666666654
No 32
>PRK09713 focB putative formate transporter; Provisional
Probab=82.46 E-value=34 Score=30.11 Aligned_cols=98 Identities=8% Similarity=0.031 Sum_probs=51.0
Q ss_pred HHHHHHHHHHHHHHHHHh--hcCCCCCchHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHHHHHHHhCCCC-----CCe
Q 025864 54 FFVAVAHAFVVAVMISAG--HISGGHLNPAVTLGLLFGGHITFFRSILYWIDQLLASSAACFLLSYLTGGLS-----TPV 126 (247)
Q Consensus 54 ~~~~l~~g~~~~~~i~~~--~iSG~h~NPavTla~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~-----~~~ 126 (247)
+..++.+.+++.+.+... =.||-. . ++.....||.++++..-.+.-=.+|-++|+.+.-++..... ...
T Consensus 68 ll~g~~F~vGLilIv~~g~ELfTgN~---~-~~~~~~~~~i~~~~~l~~w~iv~~GNlvGal~~A~l~~~s~~~~~~~~~ 143 (282)
T PRK09713 68 LVGGLCFTLGFILLAVCGTSLFTSSV---M-TVMAKSRGVISWRTWLINALLVACGNLAGIACFSLLIWFSGLVMSENAM 143 (282)
T ss_pred HHHHHHHHHHHHHHHHhCccccHHHH---H-HHHHHHhCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccchh
Confidence 444556666666666654 333322 2 22335688888888775444444555555444333221100 000
Q ss_pred e--------ecCCCCchHHHHHHHHHHHHHHHHHHHH
Q 025864 127 H--------TLASGVGYFQGIIWEIILTFSLLFTVYA 155 (247)
Q Consensus 127 ~--------~~~~~~~~~~~~~~E~~~T~~l~~~v~~ 155 (247)
. .-.-+.+..+.|+--++|-++..+.+..
T Consensus 144 ~~~~~~~ia~~K~~~~~~~~F~~gI~CN~lVclaV~~ 180 (282)
T PRK09713 144 WGVAVLHCAEGKMHHTFTESVSLGIMCNLMVCLALWM 180 (282)
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0011346777777777888777777665
No 33
>COG2116 FocA Formate/nitrite family of transporters [Inorganic ion transport and metabolism]
Probab=82.03 E-value=34 Score=29.83 Aligned_cols=101 Identities=10% Similarity=0.200 Sum_probs=56.4
Q ss_pred hHHHHHHHHHHHHHHHHHHh--hcCCCCCchHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHHHHHHHh--CC---CCC
Q 025864 52 GLFFVAVAHAFVVAVMISAG--HISGGHLNPAVTLGLLFGGHITFFRSILYWIDQLLASSAACFLLSYLT--GG---LST 124 (247)
Q Consensus 52 ~~~~~~l~~g~~~~~~i~~~--~iSG~h~NPavTla~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~--~~---~~~ 124 (247)
..+.-++++++++.+.++.. =.+| |--........+++++++.+--|.-=.+|-++|+.++-++. .+ ...
T Consensus 63 ~~lvg~~~F~~GLilVv~~g~ELfT~---n~m~~t~~~~~k~Is~~~ll~~w~~v~lgNliGa~~~a~l~~~~g~~~~~~ 139 (265)
T COG2116 63 AKLVGGLVFSLGLILVVIAGSELFTS---NTMLLTVGVLSKKISWGQLLRNWLVVYLGNLIGALFVALLFHLSGFNLTAN 139 (265)
T ss_pred HHHHHHHHHHHHHHHhhhhCcccccc---chhHHHHHHHhCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccc
Confidence 44555666766666666665 2222 22233334567889999888777777777777777655543 11 111
Q ss_pred Cee-----ec---CCCCchHHHHHHHHHHHHHHHHHHHH
Q 025864 125 PVH-----TL---ASGVGYFQGIIWEIILTFSLLFTVYA 155 (247)
Q Consensus 125 ~~~-----~~---~~~~~~~~~~~~E~~~T~~l~~~v~~ 155 (247)
+.+ .. .-+.+..+.|.--.+|-.+..+.+..
T Consensus 140 ~~~~~~~~~~a~~K~~~t~~~~F~~GI~cN~lVclAvwm 178 (265)
T COG2116 140 GQWGLFVLGVAEHKLHHTFLEAFAKGILCNWLVCLAVWM 178 (265)
T ss_pred chhHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHH
Confidence 111 00 11234566666666666666666655
No 34
>PRK10805 formate transporter; Provisional
Probab=73.44 E-value=64 Score=28.40 Aligned_cols=98 Identities=10% Similarity=0.239 Sum_probs=53.3
Q ss_pred HHHHHHHHHHHHHHHHHh--hcCCCCCchHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHHHHHHHh---CCCC--CCe
Q 025864 54 FFVAVAHAFVVAVMISAG--HISGGHLNPAVTLGLLFGGHITFFRSILYWIDQLLASSAACFLLSYLT---GGLS--TPV 126 (247)
Q Consensus 54 ~~~~l~~g~~~~~~i~~~--~iSG~h~NPavTla~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~---~~~~--~~~ 126 (247)
+..++.+.+++.+.+... =.|| |--.+++ .+.||.++.+..-.|.-=.+|-++|+.+.-++. +... .+.
T Consensus 69 ll~~~~F~vGlilIvl~g~eLFTg---n~l~~~~-~~~~~~~~~~~lr~w~iv~~GNliGal~~a~l~~~s~~~~~~~~~ 144 (285)
T PRK10805 69 LVGGICFSLGLILCVVCGADLFTS---TVLIVVA-KASGRITWGQLAKNWLNVYFGNLVGALLFVLLMWLSGEYMTANGQ 144 (285)
T ss_pred HHHHHHHHHHHHHHHHhCcccchh---hHHHHHH-HHcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccCccH
Confidence 444566666666666665 4455 5555544 578888998887555555555555555543322 1100 000
Q ss_pred e-----e---cCCCCchHHHHHHHHHHHHHHHHHHHH
Q 025864 127 H-----T---LASGVGYFQGIIWEIILTFSLLFTVYA 155 (247)
Q Consensus 127 ~-----~---~~~~~~~~~~~~~E~~~T~~l~~~v~~ 155 (247)
. . ..-+.+..+.|+-=++|-++..+.+..
T Consensus 145 ~~~~~~~~a~~K~~~~~~~~f~~gI~CN~lVclaV~~ 181 (285)
T PRK10805 145 WGLNVLQTADHKVHHTFIEAVCLGILANLMVCLAVWM 181 (285)
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0 011235666676667777766666654
No 35
>PF01226 Form_Nir_trans: Formate/nitrite transporter; InterPro: IPR000292 Proteins in this entry belong to the Formate-Nitrite Transporter (FNT) family (TC 2.A.44). The prokaryotic proteins of the FNT family probably function in the transport of the structurally related compounds, formate and nitrite. The homologous yeast protein may function as a short chain aliphatic carboxylate H+ symporter, transporting formate, acetate and propionate, and functioning primarily as an acetate uptake permease.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3Q7K_H 3KLY_E 3KLZ_A 3TDX_C 3TE2_B 3TDS_B 3TDR_E 3TDO_C 3TE1_B 3TDP_C ....
Probab=51.98 E-value=1.5e+02 Score=25.37 Aligned_cols=102 Identities=13% Similarity=0.189 Sum_probs=59.6
Q ss_pred hHHHHHHHHHHHHHHHHHHh-hcCCCCCchHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHHHHHHHhCCCC----CCe
Q 025864 52 GLFFVAVAHAFVVAVMISAG-HISGGHLNPAVTLGLLFGGHITFFRSILYWIDQLLASSAACFLLSYLTGGLS----TPV 126 (247)
Q Consensus 52 ~~~~~~l~~g~~~~~~i~~~-~iSG~h~NPavTla~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~----~~~ 126 (247)
..+..++.+++++.+.+... ..- --|-.......+.||.++++.+--+.-=.+|-++|+.+.-++..... .+.
T Consensus 56 ~~l~~g~~F~~Gl~lIv~~g~eLf--Tgn~~~~~~~~~~~~~~~~~~l~~w~~v~~gNliG~~~~a~l~~~~~~~~~~~~ 133 (250)
T PF01226_consen 56 AKLVGGLVFPIGLVLIVFLGGELF--TGNMMVMTLALLNKRISWKKLLRNWGIVYLGNLIGALLFAYLFAFSGGFMSSPA 133 (250)
T ss_dssp HHHHHHHHHTHHHHHHHHHT---T--TTTCHHHHHHHCTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTGGGTTTH
T ss_pred HHHHHHHHHHHHHHHHHHhcchhc--ccchHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccHH
Confidence 34455666666666666554 221 23555555567788999998877777777777777776554432111 010
Q ss_pred e--------ecCCCCchHHHHHHHHHHHHHHHHHHHH
Q 025864 127 H--------TLASGVGYFQGIIWEIILTFSLLFTVYA 155 (247)
Q Consensus 127 ~--------~~~~~~~~~~~~~~E~~~T~~l~~~v~~ 155 (247)
. ...-+.+.++.|+-=.+|-++..+.+..
T Consensus 134 ~~~~~~~~a~~K~~~~~~~~f~~gI~cN~lVclav~~ 170 (250)
T PF01226_consen 134 MGEYLISVAEHKVSHTFWELFFRGILCNWLVCLAVWL 170 (250)
T ss_dssp HHHHHHHHHHCCSSS-HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 0 1112346777777777888777777766
No 36
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=44.45 E-value=6.9 Score=29.59 Aligned_cols=20 Identities=20% Similarity=0.285 Sum_probs=16.9
Q ss_pred hcCCCCCchHHHHHHHHhcC
Q 025864 72 HISGGHLNPAVTLGLLFGGH 91 (247)
Q Consensus 72 ~iSG~h~NPavTla~~l~g~ 91 (247)
.-|+||+||.+.++..+.++
T Consensus 6 ~Gt~Ghv~P~lala~~L~~r 25 (139)
T PF03033_consen 6 GGTRGHVYPFLALARALRRR 25 (139)
T ss_dssp ESSHHHHHHHHHHHHHHHHT
T ss_pred cCChhHHHHHHHHHHHHhcc
Confidence 34789999999999999764
No 37
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=35.02 E-value=16 Score=32.91 Aligned_cols=19 Identities=21% Similarity=0.308 Sum_probs=16.8
Q ss_pred hcCCCCCchHHHHHHHHhc
Q 025864 72 HISGGHLNPAVTLGLLFGG 90 (247)
Q Consensus 72 ~iSG~h~NPavTla~~l~g 90 (247)
.-||||+.||+.++-.+..
T Consensus 9 GGTGGHi~Pala~a~~l~~ 27 (352)
T PRK12446 9 GGSAGHVTPNLAIIPYLKE 27 (352)
T ss_pred CCcHHHHHHHHHHHHHHHh
Confidence 6789999999999988864
No 38
>PF04632 FUSC: Fusaric acid resistance protein family; InterPro: IPR006726 This entry represents the p-hydroxybenzoic acid efflux pump subunit AaeB (pHBA efflux pump protein B) whose substrates are p-hydroxybenzoic acid (pHBA), 6-hydroxy-2-naphthoic and 2-hydroxycinnamate. It could function as a metabolic relief valve, allowing to eliminate certain compounds when they accumulate to high levels in the cell []. This family also includes fusaric acid resistance proteins [], which are likely to be membrane transporter proteins, and uncharacterised transporter YdhK.; GO: 0006810 transport, 0005886 plasma membrane
Probab=30.89 E-value=5e+02 Score=25.13 Aligned_cols=121 Identities=20% Similarity=0.135 Sum_probs=65.0
Q ss_pred chHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCeeecCCCCchHHHHHHHHHHHHHHHHHHHHHhc
Q 025864 79 NPAVTLGLLFGGHITFFRSILYWIDQLLASSAACFLLSYLTGGLSTPVHTLASGVGYFQGIIWEIILTFSLLFTVYATIV 158 (247)
Q Consensus 79 NPavTla~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~l~~~v~~~~~ 158 (247)
..+|+.+.+-....+.+....++.+.++|+.+|......+.+... .+ ..+.=++.-+++...+.. .
T Consensus 371 ~~~v~~~lfa~~~~P~~~~~~~~~G~l~~~~~a~~~~~~vlP~~~-----------~f-~~L~l~l~~~l~~~~~~~--~ 436 (650)
T PF04632_consen 371 MAAVVSSLFATLDNPAPALRLFLIGALLGAVLAFLYLFFVLPHLD-----------GF-PLLALVLAPFLFLGGLLM--A 436 (650)
T ss_pred HHHHHHHHHcCCcChHHHHHHHHHHHHHHHHHHHHHHHHhhhccC-----------cH-HHHHHHHHHHHHHHHHHH--c
Confidence 334444444445568888999999999999999988887764311 11 111112222222222221 2
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCCcchhhhHHHHHcccCCCcceeccchhhHHHHHHHHHHHHhhh
Q 025864 159 DPKKGSIDGLGPLLTGFVVGANILAGGPFSGASMNPARSFGPALVSGDWTDHWVYWVGPLIGGGLAGFIYEHFFI 233 (247)
Q Consensus 159 ~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~~~~~~wvy~v~p~~Ga~~a~~~~~~~~~ 233 (247)
++ .......++.+.......-. .....|++.- .-=.++.++|.+++.+.++.+..
T Consensus 437 ~p------~~~~~g~~~~v~f~~~~~~~-n~~~~d~~~f-------------~n~~la~l~G~~~a~l~~~li~p 491 (650)
T PF04632_consen 437 RP------RTAYIGLGFAVFFLLLLGPG-NPYSYDFATF-------------LNRALAILLGIVIAALVFRLIRP 491 (650)
T ss_pred Cc------hHHHHHHHHHHHHHHHhcCC-CCCCCCHHHH-------------HHHHHHHHHHHHHHHHHHHHHCC
Confidence 22 23445555555544443221 2233444332 22246788899999888887753
No 39
>PF09622 DUF2391: Putative integral membrane protein (DUF2391); InterPro: IPR024464 Members of this protein family are found in archaea and bacteria. Their function is unknown.
Probab=24.70 E-value=4.7e+02 Score=22.83 Aligned_cols=60 Identities=20% Similarity=0.091 Sum_probs=39.5
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCee----ecCCCCchHHHHHHHHHHHHHHHH
Q 025864 92 ITFFRSILYWIDQLLASSAACFLLSYLTGGLSTPVH----TLASGVGYFQGIIWEIILTFSLLF 151 (247)
Q Consensus 92 ~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~E~~~T~~l~~ 151 (247)
.++.+.+..++-|..=+-+|+.+.+...+++....- ...+....+..+..|+++.+++-+
T Consensus 93 ~~~~e~lgkiiv~~vP~siGa~la~~~L~~~~~~~~~~~~~~~~~~~~~~Dl~q~~vGA~~lA~ 156 (267)
T PF09622_consen 93 TPPREALGKIIVQSVPASIGAALARSQLGGDSDEEEEEEEEDKPERGYLADLGQMIVGALFLAF 156 (267)
T ss_pred CCHHHHhHhheeeEecHHHHHHHHHHHcCCCCCcccccccccccccccHHHHHHHHHHHHHHhc
Confidence 367788888888998889999999988765432211 112334456667777777665543
No 40
>PF14034 Spore_YtrH: Sporulation protein YtrH
Probab=24.01 E-value=2.5e+02 Score=20.78 Aligned_cols=47 Identities=26% Similarity=0.611 Sum_probs=36.8
Q ss_pred CCCCchHHHHHHHH-hcCc-chhHHHHHHHHHHHHHHHHHHHHHHHhCC
Q 025864 75 GGHLNPAVTLGLLF-GGHI-TFFRSILYWIDQLLASSAACFLLSYLTGG 121 (247)
Q Consensus 75 G~h~NPavTla~~l-~g~~-~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~ 121 (247)
||.++|-..+--=+ .|.. +..|=.+|+++-++|+=.|..+.+++.++
T Consensus 53 GGTfd~~~~iE~g~~~G~~~~~~KQ~l~Il~Af~GA~~g~~lI~wl~~~ 101 (102)
T PF14034_consen 53 GGTFDTFRSIEKGFFEGELSDIIKQLLYILSAFLGAHTGYILIRWLTGG 101 (102)
T ss_pred hcCchHHHHHHhHhcCCchHHHHHHHHHHHHHHHhHHHHHHHHHHHHcC
Confidence 78888887777533 4433 56688999999999999999999988653
No 41
>KOG3030 consensus Lipid phosphate phosphatase and related enzymes of the PAP2 family [Lipid transport and metabolism]
Probab=23.45 E-value=1.7e+02 Score=26.29 Aligned_cols=71 Identities=24% Similarity=0.383 Sum_probs=43.3
Q ss_pred CChhHHHHHHHHHHHHHhcCC---C-CCCCcchhhhHHHHHcc--------cCCCccee-ccchhhHHHHHHHHHHHHhh
Q 025864 166 DGLGPLLTGFVVGANILAGGP---F-SGASMNPARSFGPALVS--------GDWTDHWV-YWVGPLIGGGLAGFIYEHFF 232 (247)
Q Consensus 166 ~~~~~~~ig~~v~~~~~~~~~---~-sG~~lNPA~~l~~~~~~--------~~~~~~wv-y~v~p~~Ga~~a~~~~~~~~ 232 (247)
.+...++.-..+++..+..+. . .+-.+.|-..|.+.... .+++++|. -+.|-++|..+|...++.++
T Consensus 183 SGHsS~s~y~~~flalyl~~~~~~~~~~rllr~~l~f~~l~~A~~v~lSRV~DYkHHwsDV~aG~liG~~~A~~~~~~v~ 262 (317)
T KOG3030|consen 183 SGHSSFSFYAMGFLALYLQARLFWFGRGRLLRPLLQFLPLMLALLVGLSRVSDYKHHWSDVLAGALIGAFVAYFLYRYVF 262 (317)
T ss_pred CccHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHeeehhcccccccHHHHHHHHHHHHHHHHHHhhhc
Confidence 344445444444444333221 1 24556777777666542 26788886 45788999999999998887
Q ss_pred hcCc
Q 025864 233 IVRS 236 (247)
Q Consensus 233 ~~~~ 236 (247)
.+..
T Consensus 263 ~~f~ 266 (317)
T KOG3030|consen 263 PNFK 266 (317)
T ss_pred chhh
Confidence 5444
No 42
>PRK09979 putative rho operon leader peptide; Provisional
Probab=23.16 E-value=34 Score=19.05 Aligned_cols=14 Identities=43% Similarity=0.783 Sum_probs=11.1
Q ss_pred hcCCCCCchHHHHH
Q 025864 72 HISGGHLNPAVTLG 85 (247)
Q Consensus 72 ~iSG~h~NPavTla 85 (247)
.+||..+||..-+.
T Consensus 5 qisgsslnpscrfs 18 (33)
T PRK09979 5 QISGSSLNPSCRFS 18 (33)
T ss_pred cccCCcCCcccccc
Confidence 68999999986544
No 43
>PF09163 Form-deh_trans: Formate dehydrogenase N, transmembrane; InterPro: IPR015246 The transmembrane domain of the beta subunit of formate dehydrogenase consists of a single transmembrane helix. This domain acts as a transmembrane anchor, allowing the conduction of electrons within the protein []. ; PDB: 1KQG_B 1KQF_B.
Probab=20.32 E-value=1.6e+02 Score=18.29 Aligned_cols=21 Identities=14% Similarity=-0.081 Sum_probs=9.6
Q ss_pred hHHHHHHHHHHHHhhhcCcCC
Q 025864 218 LIGGGLAGFIYEHFFIVRSHV 238 (247)
Q Consensus 218 ~~Ga~~a~~~~~~~~~~~~~~ 238 (247)
+.++++++++.+....|+..+
T Consensus 20 ~~~~~~~~~~Hyi~vGPn~v~ 40 (44)
T PF09163_consen 20 MGATAAAGFFHYITVGPNRVE 40 (44)
T ss_dssp HHHHHHHHHHHHHHH--B-S-
T ss_pred HHHHHHHHHHHHhhcCCCCCC
Confidence 455556666555555565544
Done!