Query 025864
Match_columns 247
No_of_seqs 201 out of 1418
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 19:19:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025864.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025864hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3gd8_A Aquaporin-4; proton exc 100.0 5.5E-53 1.9E-57 355.7 21.7 219 15-234 1-223 (223)
2 3iyz_A Aquaporin-4; water tran 100.0 1.6E-52 5.6E-57 368.2 22.1 223 14-237 48-274 (340)
3 2zz9_A Aquaporin-4; water tran 100.0 3.7E-52 1.3E-56 363.0 21.7 227 9-236 4-234 (301)
4 2w2e_A AQY1, aquaporin, aquapo 100.0 2.2E-51 7.5E-56 355.8 24.4 230 15-246 42-278 (279)
5 2b6o_A Aquaporin-0, lens fiber 100.0 2.7E-51 9.1E-56 353.1 24.3 222 10-236 2-227 (263)
6 1j4n_A Aquaporin 1; membrane p 100.0 1.5E-51 5.3E-56 356.1 22.6 227 9-236 2-237 (271)
7 3d9s_A Aquaporin-5, AQP-5; aqu 100.0 2.1E-51 7.2E-56 353.9 22.0 224 10-238 4-232 (266)
8 3cn5_A Aquaporin; membrane pro 100.0 6.1E-52 2.1E-56 362.4 17.4 226 9-235 52-290 (304)
9 2o9g_A Aquaporin Z; integral m 100.0 1.8E-49 6.2E-54 336.7 21.5 215 16-234 3-232 (234)
10 3llq_A Aquaporin Z 2; aquapori 100.0 1.2E-49 4.2E-54 340.2 20.2 216 13-232 25-253 (256)
11 1ldf_A Glycerol uptake facilit 100.0 2.4E-49 8.4E-54 344.3 20.8 221 14-237 4-260 (281)
12 2f2b_A Aquaporin AQPM; protein 100.0 8.8E-49 3E-53 335.0 22.1 216 16-233 3-245 (246)
13 3c02_A Aquaglyceroporin; membr 100.0 2.2E-49 7.5E-54 340.7 15.1 222 14-238 6-248 (258)
14 2f2b_A Aquaporin AQPM; protein 99.6 4E-15 1.4E-19 126.7 11.1 101 13-120 139-245 (246)
15 2b6o_A Aquaporin-0, lens fiber 99.6 2E-15 6.9E-20 129.5 8.4 101 134-235 8-111 (263)
16 3llq_A Aquaporin Z 2; aquapori 99.5 2.7E-14 9.2E-19 121.7 7.4 100 134-233 28-132 (256)
17 2zz9_A Aquaporin-4; water tran 99.5 7.3E-14 2.5E-18 121.6 9.7 103 133-235 10-118 (301)
18 3d9s_A Aquaporin-5, AQP-5; aqu 99.5 2.6E-14 9E-19 122.7 6.7 100 134-234 10-112 (266)
19 2o9g_A Aquaporin Z; integral m 99.5 5.8E-14 2E-18 118.6 7.3 100 135-234 4-108 (234)
20 3iyz_A Aquaporin-4; water tran 99.5 6.4E-14 2.2E-18 123.2 7.0 102 134-235 50-157 (340)
21 3c02_A Aquaglyceroporin; membr 99.5 5.9E-14 2E-18 120.2 6.2 102 134-236 8-114 (258)
22 3cn5_A Aquaporin; membrane pro 99.4 8.2E-14 2.8E-18 121.5 6.9 102 134-235 59-167 (304)
23 3gd8_A Aquaporin-4; proton exc 99.4 8.1E-14 2.8E-18 116.8 6.5 101 134-234 2-108 (223)
24 1j4n_A Aquaporin 1; membrane p 99.4 1.3E-13 4.4E-18 118.8 7.5 101 134-234 9-120 (271)
25 1ldf_A Glycerol uptake facilit 99.4 1.4E-13 4.9E-18 119.2 6.6 102 134-235 6-111 (281)
26 2w2e_A AQY1, aquaporin, aquapo 99.4 5.5E-13 1.9E-17 115.2 9.8 102 134-235 43-155 (279)
27 3kcu_A Probable formate transp 86.3 14 0.00049 31.2 14.4 99 53-155 68-181 (285)
28 3tds_E Formate/nitrite transpo 77.3 31 0.0011 28.9 12.6 102 51-155 62-176 (268)
29 3s2u_A UDP-N-acetylglucosamine 47.1 3.8 0.00013 35.6 -0.2 20 72-91 10-29 (365)
30 4fc4_A Nitrite transporter NIR 43.6 73 0.0025 26.4 7.3 100 53-155 58-170 (261)
31 3kly_A Putative formate transp 30.7 2.3E+02 0.008 23.5 13.5 99 53-155 67-180 (280)
No 1
>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens}
Probab=100.00 E-value=5.5e-53 Score=355.72 Aligned_cols=219 Identities=35% Similarity=0.638 Sum_probs=192.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCcchHHHHHHHHHHHHHHHHHHh-hcCCCCCchHHHHHHHHhcCcc
Q 025864 15 PDCIKALVVEFITTFLFVFVGVGSAMAADKLVGNALVGLFFVAVAHAFVVAVMISAG-HISGGHLNPAVTLGLLFGGHIT 93 (247)
Q Consensus 15 ~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~-~iSG~h~NPavTla~~l~g~~~ 93 (247)
++++|++++||+||++|+++++++..+..+..+....+++.+++++|+++.+.++++ ++||+|+|||||++.++.|+++
T Consensus 1 ~~~~r~~~aEfiGT~~lv~~g~g~~~~~~~~~~~~~~~~~~ia~~~Gl~v~~~v~~~g~iSGaHlNPAVTla~~~~g~~~ 80 (223)
T 3gd8_A 1 QAFWKAVTAEFLAMLIFVLLSLGSTINWGGTEKPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKIS 80 (223)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHTCCTTTTTSCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCcchHHHHHHHHHHHHHHHheecccccceEcHHHHHHHHHcCCCC
Confidence 468999999999999999999998875422222345678899999999999999999 9999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhCCC---CCCeeecCCCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCChhH
Q 025864 94 FFRSILYWIDQLLASSAACFLLSYLTGGL---STPVHTLASGVGYFQGIIWEIILTFSLLFTVYATIVDPKKGSIDGLGP 170 (247)
Q Consensus 94 ~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~E~~~T~~l~~~v~~~~~~~~~~~~~~~~~ 170 (247)
|++.+.|+++|++|+++|+.+++.++++. ....+.+.++.+..++++.|+++|++|+++++.+ .|+|+.......|
T Consensus 81 ~~~~~~Yi~AQ~lGA~~ga~lv~~~~~~~~~~~lg~~~~~~~~s~~~~~~~E~i~Tf~Lv~~i~~~-~~~~~~~~~~~~p 159 (223)
T 3gd8_A 81 IAKSVFYIAAQCLGAIIGAGILYLVTPPSVVGGLGVTMVHGNLTAGHGLLVELIITFQLVFTIFAS-CDSKRTDVTGSIA 159 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHTTTTCCCCCTTSCHHHHHHHHHHHHHHHHHHHHHH-TCTTCSCCCSCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcccccccceeeccCCCccCHHHHHHHHHHHHHHHHHHHHHH-hccccCCccCCcc
Confidence 99999999999999999999999887642 2234456677899999999999999999999995 6666544456789
Q ss_pred HHHHHHHHHHHHhcCCCCCCCcchhhhHHHHHcccCCCcceeccchhhHHHHHHHHHHHHhhhc
Q 025864 171 LLTGFVVGANILAGGPFSGASMNPARSFGPALVSGDWTDHWVYWVGPLIGGGLAGFIYEHFFIV 234 (247)
Q Consensus 171 ~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~~~~~~wvy~v~p~~Ga~~a~~~~~~~~~~ 234 (247)
+.||+.+...+..+++.||+++||||||||++..++|+++|+||++|++|+++++++|++++.|
T Consensus 160 l~iGl~v~~~~~~g~~~TG~a~NPAR~~GP~l~~~~w~~~Wvy~vgP~~Ga~la~~~y~~~~~p 223 (223)
T 3gd8_A 160 LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGGLYEYVFCP 223 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTCCTTTTHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHhccCCccccccHHHHHHHHHHhcCCCcEEeehhHHHHHHHHHHHHHHHHcCC
Confidence 9999999888888888899999999999999999999999999999999999999999998764
No 2
>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus}
Probab=100.00 E-value=1.6e-52 Score=368.24 Aligned_cols=223 Identities=35% Similarity=0.638 Sum_probs=194.8
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCcchHHHHHHHHHHHHHHHHHHh-hcCCCCCchHHHHHHHHhcCc
Q 025864 14 QPDCIKALVVEFITTFLFVFVGVGSAMAADKLVGNALVGLFFVAVAHAFVVAVMISAG-HISGGHLNPAVTLGLLFGGHI 92 (247)
Q Consensus 14 ~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~-~iSG~h~NPavTla~~l~g~~ 92 (247)
.++++|++++||+||++|+|++++++++..........+++.++++||++++++++++ ++||||+|||||+++++.|++
T Consensus 48 ~~~l~r~~lAEflGT~lLV~~G~Gs~a~~~~~~~~~~~g~l~Iala~GlaV~~~v~~~g~ISGAHlNPAVTlal~l~G~~ 127 (340)
T 3iyz_A 48 TQAFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKI 127 (340)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCcchHHHHHHHHHHHHHheeEeeccCcCeeChHHHHHHHHcCCC
Confidence 3577999999999999999999999875422222334678899999999999999999 999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHhCCCCC---CeeecCCCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCChh
Q 025864 93 TFFRSILYWIDQLLASSAACFLLSYLTGGLST---PVHTLASGVGYFQGIIWEIILTFSLLFTVYATIVDPKKGSIDGLG 169 (247)
Q Consensus 93 ~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~E~~~T~~l~~~v~~~~~~~~~~~~~~~~ 169 (247)
+|.+++.||++|++||++|+.+++.++++... ..+.+.++.+..++++.|+++||+|+++++.+ .|+++.......
T Consensus 128 ~~~~~~~YiiAQ~lGA~~GA~lv~~~~~~~~~~~lg~~~~~~~~s~~~~f~~E~i~Tf~Lv~~Ila~-~d~~~~~~~~~~ 206 (340)
T 3iyz_A 128 SIAKSVFYITAQCLGAIIGAGILYLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFAS-CDDKRTDVTGSV 206 (340)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhcchhhcCceeeccCCCccCHHHHHHHHHHHHHHHHHHHHHh-hcCccCCcccch
Confidence 99999999999999999999999998865322 23345667889999999999999999999995 666554345678
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCcchhhhHHHHHcccCCCcceeccchhhHHHHHHHHHHHHhhhcCcC
Q 025864 170 PLLTGFVVGANILAGGPFSGASMNPARSFGPALVSGDWTDHWVYWVGPLIGGGLAGFIYEHFFIVRSH 237 (247)
Q Consensus 170 ~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~~~~~~wvy~v~p~~Ga~~a~~~~~~~~~~~~~ 237 (247)
|+.||+++.+.+..+++.||+++||||||||+++.++|+++|+||+||++|+++|+++|++++.|..+
T Consensus 207 pl~IGl~v~i~~~~g~~~TG~amNPARdlGPal~~~~w~~~WVywvgPiiGailaallY~~l~~p~~~ 274 (340)
T 3iyz_A 207 ALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGALYEYVFCPDVE 274 (340)
T ss_pred hhHHHHHHHHHHHhccCCccccccHHHHHHHHHHccCCCcEeehhHHHHHHHHHHHHHHHHHhCCChh
Confidence 99999999888888889999999999999999999999999999999999999999999999876553
No 3
>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A
Probab=100.00 E-value=3.7e-52 Score=363.04 Aligned_cols=227 Identities=35% Similarity=0.622 Sum_probs=194.3
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCcchHHHHHHHHHHHHHHHHHHh-hcCCCCCchHHHHHHH
Q 025864 9 HREATQPDCIKALVVEFITTFLFVFVGVGSAMAADKLVGNALVGLFFVAVAHAFVVAVMISAG-HISGGHLNPAVTLGLL 87 (247)
Q Consensus 9 ~~~~~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~-~iSG~h~NPavTla~~ 87 (247)
.+|..+++++|++++||+||++|+++++++.++......+...+++.+++++|++++++++++ ++||||+|||||++++
T Consensus 4 ~~~~~~~~~~r~~lAEflGT~lLv~~g~Gs~~~~~~~~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~ 83 (301)
T 2zz9_A 4 FKGVWTQAFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMV 83 (301)
T ss_dssp ----CCHHHHHHHHHHHHHHHHHHHHHHTTSCCTTCC-CCCCCCHHHHHHHHHHHHHHHHHHHGGGTCCCCSHHHHHHHH
T ss_pred ccccccHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHhhheeccCCcceeChHHHHHHH
Confidence 356678899999999999999999999998765432222335578889999999999999999 9999999999999999
Q ss_pred HhcCcchhHHHHHHHHHHHHHHHHHHHHHHHhCCCC---CCeeecCCCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCC
Q 025864 88 FGGHITFFRSILYWIDQLLASSAACFLLSYLTGGLS---TPVHTLASGVGYFQGIIWEIILTFSLLFTVYATIVDPKKGS 164 (247)
Q Consensus 88 l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~E~~~T~~l~~~v~~~~~~~~~~~ 164 (247)
+.|+++|++++.|+++|++||++|+.+++.++++.. ...+.+.++.+..++++.|+++||+|+++++.+ .|+++..
T Consensus 84 ~~g~~~~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~~~~~~~g~~~~~~~~s~~~~f~~E~i~Tf~Lv~~Il~~-~d~~~~~ 162 (301)
T 2zz9_A 84 CTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFAS-CDDKRTD 162 (301)
T ss_dssp HTSSSCTTTTHHHHHHHHHHHHHHHHHHHTTSCSCGGGTSSCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHH-SCSSSSC
T ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCceeeecCCcccchHHHHHHHHHHHHHHHHHHHHh-cCCCCCC
Confidence 999999999999999999999999999999986532 223345567889999999999999999999985 6665544
Q ss_pred CCChhHHHHHHHHHHHHHhcCCCCCCCcchhhhHHHHHcccCCCcceeccchhhHHHHHHHHHHHHhhhcCc
Q 025864 165 IDGLGPLLTGFVVGANILAGGPFSGASMNPARSFGPALVSGDWTDHWVYWVGPLIGGGLAGFIYEHFFIVRS 236 (247)
Q Consensus 165 ~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~~~~~~wvy~v~p~~Ga~~a~~~~~~~~~~~~ 236 (247)
.....|+.||+.+.+.++.+++.||+++||||||||+++.++|.++|+||++|++|+++|+++|++++.|+.
T Consensus 163 ~~~~~pl~IGl~v~i~~~~g~~~TG~a~NPAR~~GPal~~~~w~~~WVy~vgPiiGailaa~ly~~l~~~~~ 234 (301)
T 2zz9_A 163 VTGSVALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGALYEYVFCPDV 234 (301)
T ss_dssp CSSCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCTTTTHHHHHHHHHHHHHHHHHHTTTC---
T ss_pred ccchHhHHHHHHHHHHHHHhcCCcccccCcHHHHHHHHHhCCCcceeeeeeHHHHHHHHHHHHHHHHhCCch
Confidence 456889999999988888888899999999999999999999999999999999999999999999986543
No 4
>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A*
Probab=100.00 E-value=2.2e-51 Score=355.78 Aligned_cols=230 Identities=30% Similarity=0.463 Sum_probs=194.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhh-cccc----ccCCcchHHHHHHHHHHHHHHHHHHh-hcCCCCCchHHHHHHHH
Q 025864 15 PDCIKALVVEFITTFLFVFVGVGSAMA-ADKL----VGNALVGLFFVAVAHAFVVAVMISAG-HISGGHLNPAVTLGLLF 88 (247)
Q Consensus 15 ~~~~~~~~~EfigT~~lv~~~~~~~~~-~~~~----~~~~~~~~~~~~l~~g~~~~~~i~~~-~iSG~h~NPavTla~~l 88 (247)
++.+|++++||+||++|+|+++++... .... .++...+++.++++||++++++++++ ++||||+|||||+++++
T Consensus 42 ~~~~r~~laEfiGT~~Lv~~g~g~~~~~~~~~~~~~~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~~ 121 (279)
T 2w2e_A 42 RNHFIAMSGEFVGTFLFLWSAFVIAQIANQAPETPDGGSNPAQLIMISFGFGFGVMVGVFITYRVSGGNLNPAVTLALVL 121 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCGGGCCCHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCccHHHHHHHHHHHHHHHHHHHhhcCccccChHHHHHHHH
Confidence 477899999999999999999986422 1111 12234568889999999999999999 99999999999999999
Q ss_pred hcCcchhHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCeeecCCCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCh
Q 025864 89 GGHITFFRSILYWIDQLLASSAACFLLSYLTGGLSTPVHTLASGVGYFQGIIWEIILTFSLLFTVYATIVDPKKGSIDGL 168 (247)
Q Consensus 89 ~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~l~~~v~~~~~~~~~~~~~~~ 168 (247)
.|+++|++++.|+++|++||++|+.+++.++++.......+.++.+..++++.|+++|++|+++++.+..++++ .+.+
T Consensus 122 ~g~~~~~~~~~YiiAQ~lGA~~ga~lv~~~~~~~~~~~t~~~~~~s~~~~~~~E~i~Tf~Lv~~Il~~~~~~~~--~~~~ 199 (279)
T 2w2e_A 122 ARAIPPFRGILMAFTQIVAGMAAAGAASAMTPGEIAFANALGGGASRTRGLFLEAFGTAILCLTVLMLAVEKHR--ATWF 199 (279)
T ss_dssp TTSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCSSCCCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHTTSCST--TGGG
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHccccceeeccCCccccHHHHHHHHHHHHHHHHHHHHHHccCCCC--CcCc
Confidence 99999999999999999999999999999987654322334456789999999999999999999986544443 3458
Q ss_pred hHHHHHHHHHHHHHhcCCCCCCCcchhhhHHHHHcccCC-CcceeccchhhHHHHHHHHHHHHhhhcCcCCCCCCCCCC
Q 025864 169 GPLLTGFVVGANILAGGPFSGASMNPARSFGPALVSGDW-TDHWVYWVGPLIGGGLAGFIYEHFFIVRSHVPIPYEEAR 246 (247)
Q Consensus 169 ~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~~~-~~~wvy~v~p~~Ga~~a~~~~~~~~~~~~~~~~~~~~~~ 246 (247)
.|+.||+.+.+..++.++.||+++||||||||+++++.| +++|+||++|++|+++|+++|+++...+.++.++.+|-+
T Consensus 200 ~pl~IGl~v~~~~l~~g~~TG~s~NPAR~~GPal~~~~~~~~~WVy~vgPiiGa~la~~ly~~l~~~~~~~~~p~~d~~ 278 (279)
T 2w2e_A 200 APFVIGIALLIAHLICIYYTGAGLNPARSFGPAVAARSFPNYHWIYWLGPILGAFLAYSIWQMWKWLNYQTTNPGQDSD 278 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHHTCCCTTTTHHHHHHHHHHHHHHHHHHHHHHTTTTCSCC-----
T ss_pred HHHHHHHHHHHHHHhcccccccccChHHHHHHHHHhccchhhhhHHHHHHHHHHHHHHHHHHHHHccCCCcCCCCCCCC
Confidence 999999999999999999999999999999999998754 689999999999999999999999988888777777654
No 5
>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A*
Probab=100.00 E-value=2.7e-51 Score=353.15 Aligned_cols=222 Identities=36% Similarity=0.651 Sum_probs=196.0
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCcchHHHHHHHHHHHHHHHHHHh-hcCCCCCchHHHHHHHH
Q 025864 10 REATQPDCIKALVVEFITTFLFVFVGVGSAMAADKLVGNALVGLFFVAVAHAFVVAVMISAG-HISGGHLNPAVTLGLLF 88 (247)
Q Consensus 10 ~~~~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~-~iSG~h~NPavTla~~l 88 (247)
+|..+++.+|++++||+||++|+++++++.... ++...+++.+++++|+++.+.++++ ++||+|+|||||+++++
T Consensus 2 ~e~~~~~~~~~~laEfiGT~~Lv~~g~g~~~~~----~~~~~~~l~i~l~~Gl~v~~~i~~~g~iSGahlNPAVTla~~~ 77 (263)
T 2b6o_A 2 WELRSASFWRAIFAEFFATLFYVFFGLGASLRW----APGPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLV 77 (263)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHHHHHHSCC----CSSSCHHHHHHHHHHHHHHHHHHHGGGTTCCCCSHHHHHHHHH
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCCCcchHHHHHHHHHHHHHHHHHhhccCcCeeChHHHHHHHH
Confidence 466678899999999999999999999987532 2334578889999999999999999 99999999999999999
Q ss_pred hcCcchhHHHHHHHHHHHHHHHHHHHHHHHhCCCC---CCeeecCCCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC
Q 025864 89 GGHITFFRSILYWIDQLLASSAACFLLSYLTGGLS---TPVHTLASGVGYFQGIIWEIILTFSLLFTVYATIVDPKKGSI 165 (247)
Q Consensus 89 ~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~E~~~T~~l~~~v~~~~~~~~~~~~ 165 (247)
.|+++|.+.+.|+++|++|+++|+.+++.++++.. ...+.+.++.+..++++.|+++|++|+++++.+ .|+++...
T Consensus 78 ~g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~i~Tf~Lv~~il~~-~d~~~~~~ 156 (263)
T 2b6o_A 78 GSQMSLLRAICYVVAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHPGVSVGQATIVEIFLTLQFVLCIFAT-YDERRNGR 156 (263)
T ss_dssp TTCSCHHHHHHHHHHHHHHHHHHHHHHHHHSCTTTCSSCSCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-SCTTSCSS
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccCCccccHHHHHHHHHHHHHHHHHHHHHH-hcccCCCC
Confidence 99999999999999999999999999999987532 233455677889999999999999999999995 77665444
Q ss_pred CChhHHHHHHHHHHHHHhcCCCCCCCcchhhhHHHHHcccCCCcceeccchhhHHHHHHHHHHHHhhhcCc
Q 025864 166 DGLGPLLTGFVVGANILAGGPFSGASMNPARSFGPALVSGDWTDHWVYWVGPLIGGGLAGFIYEHFFIVRS 236 (247)
Q Consensus 166 ~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~~~~~~wvy~v~p~~Ga~~a~~~~~~~~~~~~ 236 (247)
....|+.||+.+.+.++.++++||+++||||||||++++++|+++|+||++|++|+++|+++|++++.|+.
T Consensus 157 ~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~~~~Wvy~vgP~~Ga~la~~~y~~l~~~~~ 227 (263)
T 2b6o_A 157 LGSVALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRNFTNHWVYWVGPVIGAGLGSLLYDFLLFPRL 227 (263)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTTSTTCCCHHHHHHHHHHHTCCTTCTHHHHHHHHHHHHHHHHHHTTTSCCS
T ss_pred cccHHHHHHHHHHHHHHhccCCCcccccHHHHHHHHHHcCCccceeHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 56899999999999999999999999999999999999999999999999999999999999999987654
No 6
>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A
Probab=100.00 E-value=1.5e-51 Score=356.05 Aligned_cols=227 Identities=38% Similarity=0.647 Sum_probs=196.0
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHHHHHHHHHhhcccc-----ccCCcchHHHHHHHHHHHHHHHHHHh-hcCCCCCchHH
Q 025864 9 HREATQPDCIKALVVEFITTFLFVFVGVGSAMAADKL-----VGNALVGLFFVAVAHAFVVAVMISAG-HISGGHLNPAV 82 (247)
Q Consensus 9 ~~~~~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~g~~~~~~i~~~-~iSG~h~NPav 82 (247)
.+|..+++++|++++||+||++|+|+++++....... ..+...+++.+++++|+++.+.++++ ++||||+||||
T Consensus 2 ~~e~~~~~~~r~~~aEflGT~llv~~g~g~~~~~~~~~~~~~~~g~~~~~~~ial~~Gl~v~~~i~~~g~iSGaHlNPAV 81 (271)
T 1j4n_A 2 ASEFKKKLFWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAV 81 (271)
T ss_dssp CSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCCCSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
T ss_pred ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCcccchHHHHHHHHHHHHHHHHHHhcCCcceEcHHH
Confidence 3566778899999999999999999999987654211 11122357889999999999999998 99999999999
Q ss_pred HHHHHHhcCcchhHHHHHHHHHHHHHHHHHHHHHHHhCCCC---CCeeecCCCCchHHHHHHHHHHHHHHHHHHHHHhcC
Q 025864 83 TLGLLFGGHITFFRSILYWIDQLLASSAACFLLSYLTGGLS---TPVHTLASGVGYFQGIIWEIILTFSLLFTVYATIVD 159 (247)
Q Consensus 83 Tla~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~E~~~T~~l~~~v~~~~~~ 159 (247)
|+++++.|+++|++.+.|+++|++|+++|+.+++.++.+.. ...+.+.++.+..++++.|+++|++|+++++.+ .|
T Consensus 82 Tla~~~~g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~E~i~T~~Lv~~i~~~-~d 160 (271)
T 1j4n_A 82 TLGLLLSCQISVLRAIMYIIAQCVGAIVATAILSGITSSLPDNSLGLNALAPGVNSGQGLGIEIIGTLQLVLCVLAT-TD 160 (271)
T ss_dssp HHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHTTTCTTCCTTCCCCCTTCCTTGGGHHHHHHHHHHHHHHHHH-TC
T ss_pred HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHccCCcccccccccCCCccchHHHHHHHHHHHHHHHHHHHhh-cc
Confidence 99999999999999999999999999999999999875422 223345567788999999999999999999984 67
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHhcCCCCCCCcchhhhHHHHHcccCCCcceeccchhhHHHHHHHHHHHHhhhcCc
Q 025864 160 PKKGSIDGLGPLLTGFVVGANILAGGPFSGASMNPARSFGPALVSGDWTDHWVYWVGPLIGGGLAGFIYEHFFIVRS 236 (247)
Q Consensus 160 ~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~~~~~~wvy~v~p~~Ga~~a~~~~~~~~~~~~ 236 (247)
+++.......|+.||+.+.+.++.+++.||+++||||||||++++++|+++|+||++|++|+++++++|++++.++.
T Consensus 161 ~~~~~~~~~~pl~IGl~v~~~~~~~~~~TG~a~NPAR~~Gpal~~~~~~~~wv~~vgP~~Ga~la~~~y~~~~~~~~ 237 (271)
T 1j4n_A 161 RRRRDLGGSGPLAIGFSVALGHLLAIDYTGCGINPARSFGSSVITHNFQDHWIFWVGPFIGAALAVLIYDFILAPRS 237 (271)
T ss_dssp SSCCCCCSCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHTTCCTTTTHHHHHHHHHHHHHHHHHHTTTSCCS
T ss_pred ccCCCccccHHHHHHHHHHHHHHhccCCCccccChHHHHHHHHHhCCCcceeHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 66544456899999999998888888899999999999999999999999999999999999999999999987654
No 7
>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.1e-51 Score=353.89 Aligned_cols=224 Identities=36% Similarity=0.612 Sum_probs=197.1
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCcchHHHHHHHHHHHHHHHHHHh-hcCCCCCchHHHHHHHH
Q 025864 10 REATQPDCIKALVVEFITTFLFVFVGVGSAMAADKLVGNALVGLFFVAVAHAFVVAVMISAG-HISGGHLNPAVTLGLLF 88 (247)
Q Consensus 10 ~~~~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~-~iSG~h~NPavTla~~l 88 (247)
+|..+++++|++++||+||++|+|+++++.... .+...+++.+++++|+++++.++++ ++||||+|||||+++++
T Consensus 4 ~e~~~~~~~r~~laEfiGT~~lv~~g~g~~~~~----~~~~~~~l~ial~~Glav~~~i~~~g~iSGaHlNPAVTla~~~ 79 (266)
T 3d9s_A 4 KEVCSVAFLKAVFAEFLATLIFVFFGLGSALKW----PSALPTILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLV 79 (266)
T ss_dssp HHHTSHHHHHHHHHHHHHHHHHHHHHHHHHSCC----SSSCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
T ss_pred hhhhChHHHHHHHHHHHHHHHHHHHHHHHHhCC----CCCCccHHHHHHHHHHHHHHHHHHHcccCcceECHHHHHHHHH
Confidence 466788999999999999999999999987532 1233578889999999999999999 99999999999999999
Q ss_pred hcCcchhHHHHHHHHHHHHHHHHHHHHHHHhCCC---CCCeeecCCCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC
Q 025864 89 GGHITFFRSILYWIDQLLASSAACFLLSYLTGGL---STPVHTLASGVGYFQGIIWEIILTFSLLFTVYATIVDPKKGSI 165 (247)
Q Consensus 89 ~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~E~~~T~~l~~~v~~~~~~~~~~~~ 165 (247)
.|+++|++.+.|+++|++|+++|+.+++.++++. ....+.+.++.+..++++.|+++|++|+++++.+ .|+++...
T Consensus 80 ~g~~~~~~~~~Yi~AQ~lGA~~ga~l~~~~~~~~~~~~~g~~~~~~~~s~~~~~~~E~i~Tf~Lv~~il~~-~d~~~~~~ 158 (266)
T 3d9s_A 80 GNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNARGNLAVNALNNNTTQGQAMVVELILTFQLALCIFAS-TDSRRTSP 158 (266)
T ss_dssp TSSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHTTTTCCCCCTTSCHHHHHHHHHHHHHHHHHHHHHH-HCTTCCSC
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHccccccCceeeccCCccccHHHHHHHHHHHHHHHHHHHHHH-hcccCCCc
Confidence 9999999999999999999999999999988642 1223344567789999999999999999999995 67665444
Q ss_pred CChhHHHHHHHHHHHHHhcCCCCCCCcchhhhHHHHHcccCCCc-ceeccchhhHHHHHHHHHHHHhhhcCcCC
Q 025864 166 DGLGPLLTGFVVGANILAGGPFSGASMNPARSFGPALVSGDWTD-HWVYWVGPLIGGGLAGFIYEHFFIVRSHV 238 (247)
Q Consensus 166 ~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~~~~~-~wvy~v~p~~Ga~~a~~~~~~~~~~~~~~ 238 (247)
....|+.||+.+.+.++.++++||+++||||||||++++++|++ +|+||++|++|+++|+++|++++.|+.++
T Consensus 159 ~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~~~~~Wvy~vgP~~Ga~la~~~y~~l~~~~~~~ 232 (266)
T 3d9s_A 159 VGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILYFYLLFPNSLS 232 (266)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHTCCCTTHHHHHHHHHHHHHHHHHHHHHTTSCCSCC
T ss_pred cchHHHHHHHHHHHHHHHhhccccccccHHHHHHHHHHcCCcccCEeeeehHHHHHHHHHHHHHHHHhCCCchh
Confidence 56899999999999999999999999999999999999999998 99999999999999999999998765543
No 8
>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A
Probab=100.00 E-value=6.1e-52 Score=362.44 Aligned_cols=226 Identities=34% Similarity=0.565 Sum_probs=193.5
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHHHHHHHHHhhccccc-cCCcchHHHHHHHHHHHHHHHHHHh-hcCCCCCchHHHHHH
Q 025864 9 HREATQPDCIKALVVEFITTFLFVFVGVGSAMAADKLV-GNALVGLFFVAVAHAFVVAVMISAG-HISGGHLNPAVTLGL 86 (247)
Q Consensus 9 ~~~~~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~-~~~~~~~~~~~l~~g~~~~~~i~~~-~iSG~h~NPavTla~ 86 (247)
.+|..+++++|++++||+||++|+|+++++.+...... +....+++.++++||++++++++++ ++||||+|||||+++
T Consensus 52 ~~e~~~~~~~r~~lAEfiGT~lLv~~g~gsv~~~~~~~~~~~~~g~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~ 131 (304)
T 3cn5_A 52 LGELKLWSFWRAAIAEFIATLLFLYITVATVIGHSKETVVCGSVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGL 131 (304)
T ss_dssp ---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSTTCSCHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHH
T ss_pred ccccccHHHHHHHHHHHHHHHHHHHHHhHHHeEeccccCCCCCCCceeehhhhhhhhheeeeEeeccCCCccCcHHHHHH
Confidence 45666778999999999999999999999886543222 2345678899999999999999999 999999999999999
Q ss_pred HHhcCcchhHHHHHHHHHHHHHHHHHHHHHHHhCCC----CCCeeecCCCCchHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 025864 87 LFGGHITFFRSILYWIDQLLASSAACFLLSYLTGGL----STPVHTLASGVGYFQGIIWEIILTFSLLFTVYATIVDPKK 162 (247)
Q Consensus 87 ~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~E~~~T~~l~~~v~~~~~~~~~ 162 (247)
++.|+++|++++.|+++|++||++|+.+++.++++. ......+.++.+..++++.|+++|++|+++++. .+|+++
T Consensus 132 ~l~g~~~~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~~~~~~~~g~~~~~~~~s~~~~f~~E~i~TfiLv~~Il~-~~d~~~ 210 (304)
T 3cn5_A 132 FLARKVELLRALVYMIAQCLGAICGVGLVKAFMKGPYNQFGGGANSVALGYNKGTALGAEIIGTFVLVYTVFS-ATDPKR 210 (304)
T ss_dssp HHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHTTTTCCCCCTTCCHHHHHHHHHHHHHHHHHHHHH-TEEEEE
T ss_pred HHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcccccCCCccHHHHHHHHHHHHHHHHHHHhh-eecCcc
Confidence 999999999999999999999999999999887531 111223456678999999999999999999996 677554
Q ss_pred CCCCC----hhHHHHHHHHHHHHHhcCCCCCCCcchhhhHHHHHc---ccCCCcceeccchhhHHHHHHHHHHHHhhhcC
Q 025864 163 GSIDG----LGPLLTGFVVGANILAGGPFSGASMNPARSFGPALV---SGDWTDHWVYWVGPLIGGGLAGFIYEHFFIVR 235 (247)
Q Consensus 163 ~~~~~----~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~---~~~~~~~wvy~v~p~~Ga~~a~~~~~~~~~~~ 235 (247)
...+. +.|+.||++|++..++.++.||+++||||||||+++ +++|+++|+||++|++|+++|+++|++++.++
T Consensus 211 ~~~~~~~~~lapl~IGl~V~~~~l~~g~~TG~amNPAR~~GPal~~~~~~~w~~~WvywvgPiiGa~laa~~y~~l~~~~ 290 (304)
T 3cn5_A 211 SARDSHVPILAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIFNSNKVWDDQWIFWVGPFIGAAVAAAYHQYVLRAA 290 (304)
T ss_dssp ESTTSCCEEECHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHCCHHHHHHTTHHHHHHHHHHHHHHHHHHTTSCCC
T ss_pred CCCCcccccchHHHHHHHHHHHHHhccCCCccccChHHHHHHHHHHccCCCcCceEEEeehHHHHHHHHHHHHHHHhCCC
Confidence 32222 789999999999999999999999999999999999 56899999999999999999999999997654
No 9
>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A*
Probab=100.00 E-value=1.8e-49 Score=336.67 Aligned_cols=215 Identities=31% Similarity=0.503 Sum_probs=185.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCcchHHHHHHHHHHHHHHHHHHh-hcCCCCCchHHHHHHHHhcCcch
Q 025864 16 DCIKALVVEFITTFLFVFVGVGSAMAADKLVGNALVGLFFVAVAHAFVVAVMISAG-HISGGHLNPAVTLGLLFGGHITF 94 (247)
Q Consensus 16 ~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~-~iSG~h~NPavTla~~l~g~~~~ 94 (247)
+++|++++||+||++|+++++++...... .++...+++.+++++|+++.+.+++. ++||+|+|||||++.++.|+++|
T Consensus 3 ~l~r~~~aEf~GT~~lv~~g~g~~~~~~~-~~~~~~~~l~ia~~~Gl~v~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~ 81 (234)
T 2o9g_A 3 HMFRKLAAESFGTFWLVFGGSGSAVLAAG-FPELGIGFAGVALAFGLTVLTMAFAVGHISGGHFNPAVTIGLWAGGRFPA 81 (234)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHTTT-CTTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcccC-CCCCCcChHHHHHHHHHHHHHHHHHhhccCcceeCHHHHHHHHHhCCCCH
Confidence 36899999999999999999998754322 22334578899999999999999999 99999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCCCC----------C-Ceee-cCCCCchHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 025864 95 FRSILYWIDQLLASSAACFLLSYLTGGLS----------T-PVHT-LASGVGYFQGIIWEIILTFSLLFTVYATIVDPKK 162 (247)
Q Consensus 95 ~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~----------~-~~~~-~~~~~~~~~~~~~E~~~T~~l~~~v~~~~~~~~~ 162 (247)
++.+.|+++|++|+++|+.+++.++++.. . .... .+.+.+..++++.|+++|++|+++++. ..|+|+
T Consensus 82 ~~~~~Yi~aQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~t~p~~~~~~~~~~~E~i~T~~Lv~~i~~-~~d~~~ 160 (234)
T 2o9g_A 82 KEVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGYGEHSPGGYSMLSALVVELVLSAGFLLVIHG-ATDKFA 160 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCCHHHHCTTCCCCGGGSTTCCCHHHHHHHHHHHHHHHHHHHHH-HTSTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccccceeeecCCCccchHHHHHHHHHHHHHHHHHHHH-hcCCCC
Confidence 99999999999999999999999886431 0 1111 223568899999999999999999998 467654
Q ss_pred CCCCChhHHHHHHHHHHHHHhcCCCCCCCcchhhhHHHHHcccC--CCcceeccchhhHHHHHHHHHHHHhhhc
Q 025864 163 GSIDGLGPLLTGFVVGANILAGGPFSGASMNPARSFGPALVSGD--WTDHWVYWVGPLIGGGLAGFIYEHFFIV 234 (247)
Q Consensus 163 ~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~~--~~~~wvy~v~p~~Ga~~a~~~~~~~~~~ 234 (247)
.+...|+.||+.+....+..++.||+++||||||||++++++ |+++|+||++|++|+++++++|++++.+
T Consensus 161 --~~~~~pl~IGl~v~~~~~~~g~~TG~s~NPAR~lGPal~~g~~~~~~~Wv~~vgP~~Ga~la~~~y~~~~~~ 232 (234)
T 2o9g_A 161 --PAGFAPIAIGLACTLIHLISIPVTNTSVNPARSTAVAIFQGGWALEQLWFFWVVPIVGGIIGGLIYRTLLEK 232 (234)
T ss_dssp --CTTCHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHCSHHHHSHHHHHHHHHHHHHHHHHHHHHHTSC
T ss_pred --ccchHHHHHHHHHHHHHHHccCCCccccChHHHHHHHHHhCCCCCceeeeeehHHhHHHHHHHHHHHHHcCC
Confidence 346899999999999999999999999999999999999775 5599999999999999999999998654
No 10
>3llq_A Aquaporin Z 2; aquaporin tetramer, membrane protein, water channel, structu genomics, PSI-2, protein structure initiative; 2.01A {Agrobacterium tumefaciens str}
Probab=100.00 E-value=1.2e-49 Score=340.20 Aligned_cols=216 Identities=31% Similarity=0.465 Sum_probs=184.1
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCcchHHHHHHHHHHHHHHHHHHh-hcCCCCCchHHHHHHHHhcC
Q 025864 13 TQPDCIKALVVEFITTFLFVFVGVGSAMAADKLVGNALVGLFFVAVAHAFVVAVMISAG-HISGGHLNPAVTLGLLFGGH 91 (247)
Q Consensus 13 ~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~-~iSG~h~NPavTla~~l~g~ 91 (247)
..++++|++++||+||++|+++++++.+.... .++...+++.++++||+++++.++++ ++||||+|||||+++++.|+
T Consensus 25 ~~~~l~r~~laEflGT~lLv~~G~G~~~~~~~-~~~~~~~~l~iala~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~ 103 (256)
T 3llq_A 25 QSYVMGRKLLAEFFGTFWLVFGGCGSAVFAAA-FPELGIGFTGVALAFGLTVLTMAYAVGGISGGHFNPAVSVGLTVAGR 103 (256)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHHHHHTT-CTTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTS
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCCCccHHHHHHHHHHHHHHHHheeeccccceEchHHHHHHHHhcC
Confidence 35678999999999999999999998754432 22345688999999999999999999 99999999999999999999
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHhCCCC------C---Ceee-cCCCCchHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 025864 92 ITFFRSILYWIDQLLASSAACFLLSYLTGGLS------T---PVHT-LASGVGYFQGIIWEIILTFSLLFTVYATIVDPK 161 (247)
Q Consensus 92 ~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~------~---~~~~-~~~~~~~~~~~~~E~~~T~~l~~~v~~~~~~~~ 161 (247)
++|++.+.|+++|++|+++|+.+++.++++.. . .... .+.+.+..++++.|+++|++|+++++. ..|++
T Consensus 104 ~~~~~~~~YiiAQ~lGA~~ga~lv~~~~~~~~~~~~~~~~~~~~~~t~p~~~s~~~~f~~E~i~Tf~Lv~~il~-~~d~~ 182 (256)
T 3llq_A 104 FPASSLVPYVIAQVAGAIVAAAALYVIATGKAGIDLGGFASNGYGEHSPGGYSLVSALLIEIILTAFFLIVILG-STHGR 182 (256)
T ss_dssp SCGGGHHHHHHHHHHHHHHHHHHHHHHHTTBTTCCCTTTTCCCCGGGSTTCCCHHHHHHHHHHHHHHHHHHHHH-HHSTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccccccccccccccccCCcccCHHHHHHHHHHHHHHHHHHHHH-hcCCC
Confidence 99999999999999999999999999874321 0 1111 223568899999999999999999998 47766
Q ss_pred CCCCCChhHHHHHHHHHHHHHhcCCCCCCCcchhhhHHHHHcccC--CCcceeccchhhHHHHHHHHHHHHhh
Q 025864 162 KGSIDGLGPLLTGFVVGANILAGGPFSGASMNPARSFGPALVSGD--WTDHWVYWVGPLIGGGLAGFIYEHFF 232 (247)
Q Consensus 162 ~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~~--~~~~wvy~v~p~~Ga~~a~~~~~~~~ 232 (247)
+ .....|+.||+++....+..++.||+++||||||||+++.++ |+++|+||++|++|+++|+++|+++.
T Consensus 183 ~--~~~~~pl~IGl~v~~i~~~~g~~TG~a~NPAR~lGPal~~g~~~~~~~WVy~vgPi~Ga~la~~~y~~l~ 253 (256)
T 3llq_A 183 V--PAGFAPIAIGLALTLIHLISIPVTNTSVNPARSTGQALFVGGWALQQLWLFWLAPIVGGAAGAVIWKLFG 253 (256)
T ss_dssp S--CTTCHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHCHHHHHHTTHHHHHHHHHHHHHHHHHHHHT
T ss_pred C--CccchhHHHHHHHHHHHHHhccccccccChHHHHHHHHHcCCCcccceeeeeeHHHHHHHHHHHHHHHhc
Confidence 4 346889999999999999999999999999999999998764 66999999999999999999999883
No 11
>1ldf_A Glycerol uptake facilitator protein; glycerol-conducting membrane channel protein, transport PROT; HET: BOG; 2.10A {Escherichia coli} SCOP: f.19.1.1 PDB: 1fx8_A* 1lda_A* 1ldi_A*
Probab=100.00 E-value=2.4e-49 Score=344.27 Aligned_cols=221 Identities=28% Similarity=0.403 Sum_probs=184.5
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCcchHHHHHHHHHHHHHHHHHHh-hcCCCCCchHHHHHHHHhcCc
Q 025864 14 QPDCIKALVVEFITTFLFVFVGVGSAMAADKLVGNALVGLFFVAVAHAFVVAVMISAG-HISGGHLNPAVTLGLLFGGHI 92 (247)
Q Consensus 14 ~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~-~iSG~h~NPavTla~~l~g~~ 92 (247)
+++++|++++||+||++|+++++++..... ..+ ...+...++++||+++.+.++++ ++||||+|||||+++++.|++
T Consensus 4 ~~~~~~~~laEflGT~~Lv~~G~g~~~~~~-l~~-~~~g~~~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~ 81 (281)
T 1ldf_A 4 TSTLKGQCIAEFLGTGLLIFFGVGCVAALK-VAG-ASFGQWEISVIFGLGVAMAIYLTAGVSGAHLNPAVTIALWLFACF 81 (281)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHHH-HSC-CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHSCC
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-ccC-CCCchHHHHHHHHHHHHHHhheecccCcCeeChHHHHHHHHcCCC
Confidence 457899999999999999999998875432 222 22344458999999999999999 999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHhCCCC-------------------CCee--ecCCCCchHHHHHHHHHHHHHHHH
Q 025864 93 TFFRSILYWIDQLLASSAACFLLSYLTGGLS-------------------TPVH--TLASGVGYFQGIIWEIILTFSLLF 151 (247)
Q Consensus 93 ~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~-------------------~~~~--~~~~~~~~~~~~~~E~~~T~~l~~ 151 (247)
+|++.+.|+++|++|+++|+.+++.++++.. ...+ .+.++.+..++++.|+++|++|++
T Consensus 82 ~~~~~~~Yi~AQ~lGA~~ga~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~f~t~p~~~~s~~~~~~~E~i~Tf~Lv~ 161 (281)
T 1ldf_A 82 DKRKVIPFIVSQVAGAFCAAALVYGLYYNLFFDFEQTHHIVRGSVESVDLAGTFSTYPNPHINFVQAFAVEMVITAILMG 161 (281)
T ss_dssp CTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTSGGGHHHHTTTSCCCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccccccccccccccccceeeccCCccccHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999998874310 0112 234457899999999999999999
Q ss_pred HHHHHhcCCCCCC-CCChhHHHHHHHHHHHHHhcCCCCCCCcchhhhHHHHHccc-------CC------Ccceeccchh
Q 025864 152 TVYATIVDPKKGS-IDGLGPLLTGFVVGANILAGGPFSGASMNPARSFGPALVSG-------DW------TDHWVYWVGP 217 (247)
Q Consensus 152 ~v~~~~~~~~~~~-~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~-------~~------~~~wvy~v~p 217 (247)
+++.+ .|+++.. .+.+.|+.||+.+.+..+..++.||+++||||||||++++. .| .++||||++|
T Consensus 162 ~il~~-~d~~~~~~~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~g~g~~~~~~~~~~~~~WVy~vgP 240 (281)
T 1ldf_A 162 LILAL-TDDGNGVPRGPLAPLLIGLLIAVIGASMGPLTGTAMNPARDFGPKVFAWLAGWGNVAFTGGRDIPYFLVPLFGP 240 (281)
T ss_dssp HHHHH-HCTTSSSCCGGGHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHTTTTTHHHHTTCSSCTTHHHHHHH
T ss_pred HHHHH-hccCCCCcccchHHHHHHHHHHHHHHhcccccccccCcHhhHHHHHHHHhcccccccccccCCCceeeHHhHHH
Confidence 99995 6665543 34689999999999999999999999999999999999851 12 2799999999
Q ss_pred hHHHHHHHHHHHHhhhcCcC
Q 025864 218 LIGGGLAGFIYEHFFIVRSH 237 (247)
Q Consensus 218 ~~Ga~~a~~~~~~~~~~~~~ 237 (247)
++|+++|+++|++++.++.+
T Consensus 241 i~Ga~la~~~y~~l~~~~~~ 260 (281)
T 1ldf_A 241 IVGAIVGAFAYRKLIGRHLP 260 (281)
T ss_dssp HHHHHHHHHHHHHHTGGGC-
T ss_pred HHHHHHHHHHHHHHhCccCC
Confidence 99999999999999876554
No 12
>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A*
Probab=100.00 E-value=8.8e-49 Score=335.04 Aligned_cols=216 Identities=32% Similarity=0.512 Sum_probs=185.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcccccc----------C-----CcchHHHHHHHHHHHHHHHHHHh-hcCCCCCc
Q 025864 16 DCIKALVVEFITTFLFVFVGVGSAMAADKLVG----------N-----ALVGLFFVAVAHAFVVAVMISAG-HISGGHLN 79 (247)
Q Consensus 16 ~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~----------~-----~~~~~~~~~l~~g~~~~~~i~~~-~iSG~h~N 79 (247)
+++|++++||+||++|+|+++++......+.+ + ...+++.+++++|+++.+.++++ ++||||+|
T Consensus 3 ~~~~~~~aEfiGT~~lv~~g~g~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~ia~~~Gl~v~~~v~~~g~iSGaH~N 82 (246)
T 2f2b_A 3 SLTKRCIAEFIGTFILVFFGAGSAAVTLMIASGGTSPNPFNIGIGLLGGLGDWVAIGLAFGFAIAASIYALGNISGCHIN 82 (246)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSSTTCCSTTTTTTHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCS
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCccccccccccccccccccchhHHHHHHHHHHHHHhheecccccceeC
Confidence 57899999999999999999998766432211 1 23356779999999999999999 99999999
Q ss_pred hHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHHHHHHHhCCC---CCCee--ecCCCCchHHHHHHHHHHHHHHHHHHH
Q 025864 80 PAVTLGLLFGGHITFFRSILYWIDQLLASSAACFLLSYLTGGL---STPVH--TLASGVGYFQGIIWEIILTFSLLFTVY 154 (247)
Q Consensus 80 PavTla~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~---~~~~~--~~~~~~~~~~~~~~E~~~T~~l~~~v~ 154 (247)
||||++.++.|+++|++.+.|+++|++|+++|+.+++.+++++ ....+ .+.++.+..++++.|+++|++|+++++
T Consensus 83 PAVTla~~~~g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~~~~~t~p~~~~~~~~~~~~E~i~Tf~Lv~~i~ 162 (246)
T 2f2b_A 83 PAVTIGLWSVKKFPGREVVPYIIAQLLGAAFGSFIFLQCAGIGAATVGGLGATAPFPGISYWQAMLAEVVGTFLLMITIM 162 (246)
T ss_dssp HHHHHHHHHTTSSCGGGHHHHHHHHHHHHHHHHHHHHHHHCTHHHHTTGGGCCCCCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhcceeeeccCccccchHHHHHHHHHHHHHHHheee
Confidence 9999999999999999999999999999999999999998762 12222 233567899999999999999999999
Q ss_pred HHhcCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCCcchhhhHHHHHc------ccCCCcceeccchhhHHHHHHHHHH
Q 025864 155 ATIVDPKKGSIDGLGPLLTGFVVGANILAGGPFSGASMNPARSFGPALV------SGDWTDHWVYWVGPLIGGGLAGFIY 228 (247)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~------~~~~~~~wvy~v~p~~Ga~~a~~~~ 228 (247)
.+..|+++. ....|+.+|+.+...+++.++.||+++||||||||++. +.+|++.|+||++|++|+++++++|
T Consensus 163 ~~~~~~~~~--~~~~pl~iGl~v~~~~~~~g~~TG~~iNPAr~lgp~l~~~~~g~~~~w~~~~vy~vap~~Ga~laa~~y 240 (246)
T 2f2b_A 163 GIAVDERAP--KGFAGIIIGLTVAGIITTLGNISGSSLNPARTFGPYLNDMIFAGTDLWNYYSIYVIGPIVGAVLAALTY 240 (246)
T ss_dssp HHTTSTTSC--TTCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCGGGTTHHHHHHHHHHHHHHHHH
T ss_pred EEecCCCCC--CceeeHHHHHHHHHHHhcccccCCCccCHHHHHHHHHHHHHcCCCCCcceEEEeeeHHHHHHHHHHHHH
Confidence 865555542 46789999999999999999999999999999999992 2378899999999999999999999
Q ss_pred HHhhh
Q 025864 229 EHFFI 233 (247)
Q Consensus 229 ~~~~~ 233 (247)
++++.
T Consensus 241 ~~l~~ 245 (246)
T 2f2b_A 241 QYLTS 245 (246)
T ss_dssp HHHTC
T ss_pred HHHcC
Confidence 98853
No 13
>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum}
Probab=100.00 E-value=2.2e-49 Score=340.68 Aligned_cols=222 Identities=22% Similarity=0.327 Sum_probs=185.1
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCcchHHHHHHHHHHHHHHHHHHh-hcCCCCCchHHHHHHHHhcCc
Q 025864 14 QPDCIKALVVEFITTFLFVFVGVGSAMAADKLVGNALVGLFFVAVAHAFVVAVMISAG-HISGGHLNPAVTLGLLFGGHI 92 (247)
Q Consensus 14 ~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~-~iSG~h~NPavTla~~l~g~~ 92 (247)
.++++|++++||+||++|+|+++++..+... .+...+++.+++++|+++.+.++++ ++||||+|||||++.++.|++
T Consensus 6 ~~~~~~~~~aEflGT~~lv~~G~g~~~~~~~--~~~~~~~l~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~ 83 (258)
T 3c02_A 6 YKSYVREFIGEFLGTFVLMFLGEGATANFHT--TGLSGDWYKLCLGWGLAVFFGILVSAKLSGAHLNLAVSIGLSSINKF 83 (258)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHHHH--SSSTTCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccc--CCCCccHHHHHHHHHHHHHHHHheecccCcCeeChHHHHHHHHhCCC
Confidence 3578999999999999999999998765432 1224578889999999999999999 999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHhCCC----CCC----eeecCCCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCC-
Q 025864 93 TFFRSILYWIDQLLASSAACFLLSYLTGGL----STP----VHTLASGVGYFQGIIWEIILTFSLLFTVYATIVDPKKG- 163 (247)
Q Consensus 93 ~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~----~~~----~~~~~~~~~~~~~~~~E~~~T~~l~~~v~~~~~~~~~~- 163 (247)
+|++.+.|+++|++|+++|+.+++.++++. ..+ ........+..++++.|+++|++|+++++.+ .|+|+.
T Consensus 84 ~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~t~p~~~~~~~E~i~Tf~Lv~~i~~~-~d~~~~~ 162 (258)
T 3c02_A 84 DLKKIPVYFFAQLLGAFVGTSTVYGLYHGFISNSKIPQFAWETSRNPSISLTGAFFNELILTGILLLVILVV-VDENICG 162 (258)
T ss_dssp CGGGHHHHHHHHHHHHHHHHHHHHHHTHHHHHTTCSCTTCSSCCCCTTSCHHHHHHHHHHHHHHHHHHHHHH-HCHHHHC
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHcchhhhhccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHHH-hCcccCC
Confidence 999999999999999999999999887531 100 1111123455679999999999999999995 565542
Q ss_pred CCCChh-HHHHHHHHHHHHHhcCCCCCCCcchhhhHHHHHccc------CC----CcceeccchhhHHHHHHHHHHHHhh
Q 025864 164 SIDGLG-PLLTGFVVGANILAGGPFSGASMNPARSFGPALVSG------DW----TDHWVYWVGPLIGGGLAGFIYEHFF 232 (247)
Q Consensus 164 ~~~~~~-~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~------~~----~~~wvy~v~p~~Ga~~a~~~~~~~~ 232 (247)
..+... |+.||+.+....++.++.||+++||||||||+++++ .| +++|+||++|++|+++++++|++++
T Consensus 163 ~~~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~~g~~~~~~~~~y~Wv~~vgP~~Ga~la~~~y~~~~ 242 (258)
T 3c02_A 163 KFHILKLSSVVGLIILCIGITFGGNTGFALNPSRDLGSRFLSLIAYGKDTFTKDNFYFWVPLVAPCVGSVVFCQFYDKVI 242 (258)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCTHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTH
T ss_pred cccccHHHHHHHHHHHHHHHhccCccCCCcChHHHHHHHHHHhccccccccccCCceeehHHHHHHHHHHHHHHHHHHHh
Confidence 234577 999999999999999999999999999999999862 34 6799999999999999999999998
Q ss_pred hcCcCC
Q 025864 233 IVRSHV 238 (247)
Q Consensus 233 ~~~~~~ 238 (247)
.++.++
T Consensus 243 ~~~~~~ 248 (258)
T 3c02_A 243 CPLVDL 248 (258)
T ss_dssp HHHHHH
T ss_pred cccCCC
Confidence 776554
No 14
>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A*
Probab=99.60 E-value=4e-15 Score=126.68 Aligned_cols=101 Identities=29% Similarity=0.418 Sum_probs=83.2
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCcchHHHHHHHHHHHHHHHHHHh-hcCCCCCchHHHHHHHH---
Q 025864 13 TQPDCIKALVVEFITTFLFVFVGVGSAMAADKLVGNALVGLFFVAVAHAFVVAVMISAG-HISGGHLNPAVTLGLLF--- 88 (247)
Q Consensus 13 ~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~-~iSG~h~NPavTla~~l--- 88 (247)
...+.++.++.|+++|++|++..+++..... .+.+ ..++.+|+.+...++.. ++||+|+|||+|+++.+
T Consensus 139 ~~~~~~~~~~~E~i~Tf~Lv~~i~~~~~~~~-----~~~~--~~pl~iGl~v~~~~~~~g~~TG~~iNPAr~lgp~l~~~ 211 (246)
T 2f2b_A 139 PGISYWQAMLAEVVGTFLLMITIMGIAVDER-----APKG--FAGIIIGLTVAGIITTLGNISGSSLNPARTFGPYLNDM 211 (246)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHHHHHHTTSTT-----SCTT--CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
T ss_pred cccchHHHHHHHHHHHHHHHheeeEEecCCC-----CCCc--eeeHHHHHHHHHHHhcccccCCCccCHHHHHHHHHHHH
Confidence 4567889999999999999999887643221 1112 34688999999999888 99999999999999888
Q ss_pred --hcCcchhHHHHHHHHHHHHHHHHHHHHHHHhC
Q 025864 89 --GGHITFFRSILYWIDQLLASSAACFLLSYLTG 120 (247)
Q Consensus 89 --~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~ 120 (247)
.++..|.+.|+||++|++|+++|+.+++.+.+
T Consensus 212 ~~g~~~~w~~~~vy~vap~~Ga~laa~~y~~l~~ 245 (246)
T 2f2b_A 212 IFAGTDLWNYYSIYVIGPIVGAVLAALTYQYLTS 245 (246)
T ss_dssp HHHCCCCGGGTTHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HcCCCCCcceEEEeeeHHHHHHHHHHHHHHHHcC
Confidence 34667889999999999999999999988754
No 15
>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A*
Probab=99.59 E-value=2e-15 Score=129.55 Aligned_cols=101 Identities=21% Similarity=0.203 Sum_probs=86.5
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCC--hhHHHHHHHHHHHHHhcCCCCCCCcchhhhHHHHHccc-CCCcc
Q 025864 134 GYFQGIIWEIILTFSLLFTVYATIVDPKKGSIDG--LGPLLTGFVVGANILAGGPFSGASMNPARSFGPALVSG-DWTDH 210 (247)
Q Consensus 134 ~~~~~~~~E~~~T~~l~~~v~~~~~~~~~~~~~~--~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~-~~~~~ 210 (247)
+..+.++.|+++|++|+++.+.+....+.. ... ...+.+|+.+++.++..+++||+|+|||++++.++.+. +|.+.
T Consensus 8 ~~~~~~laEfiGT~~Lv~~g~g~~~~~~~~-~~~~l~i~l~~Gl~v~~~i~~~g~iSGahlNPAVTla~~~~g~~~~~~~ 86 (263)
T 2b6o_A 8 SFWRAIFAEFFATLFYVFFGLGASLRWAPG-PLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRA 86 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCCCSS-SCHHHHHHHHHHHHHHHHHHHGGGTTCCCCSHHHHHHHHHTTCSCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCC-CcchHHHHHHHHHHHHHHHHHhhccCcCeeChHHHHHHHHhcCCCHHHH
Confidence 568899999999999999999865432221 222 25788899999999999999999999999999999876 89999
Q ss_pred eeccchhhHHHHHHHHHHHHhhhcC
Q 025864 211 WVYWVGPLIGGGLAGFIYEHFFIVR 235 (247)
Q Consensus 211 wvy~v~p~~Ga~~a~~~~~~~~~~~ 235 (247)
|+|+++|++|+++|+.+.+.++.++
T Consensus 87 ~~Yi~AQ~lGa~~ga~l~~~~~~~~ 111 (263)
T 2b6o_A 87 ICYVVAQLLGAVAGAAVLYSVTPPA 111 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHcccc
Confidence 9999999999999999999997653
No 16
>3llq_A Aquaporin Z 2; aquaporin tetramer, membrane protein, water channel, structu genomics, PSI-2, protein structure initiative; 2.01A {Agrobacterium tumefaciens str}
Probab=99.50 E-value=2.7e-14 Score=121.75 Aligned_cols=100 Identities=22% Similarity=0.125 Sum_probs=82.8
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhcC-CC-CCCCCC--hhHHHHHHHHHHHHHhcCCCCCCCcchhhhHHHHHccc-CCC
Q 025864 134 GYFQGIIWEIILTFSLLFTVYATIVD-PK-KGSIDG--LGPLLTGFVVGANILAGGPFSGASMNPARSFGPALVSG-DWT 208 (247)
Q Consensus 134 ~~~~~~~~E~~~T~~l~~~v~~~~~~-~~-~~~~~~--~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~-~~~ 208 (247)
+..+.++.|+++|++|++..++++.. .. +....+ ...+.+|+.|++.+++.+++||+++|||++++.++.+. +|.
T Consensus 28 ~l~r~~laEflGT~lLv~~G~G~~~~~~~~~~~~~~~l~iala~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~ 107 (256)
T 3llq_A 28 VMGRKLLAEFFGTFWLVFGGCGSAVFAAAFPELGIGFTGVALAFGLTVLTMAYAVGGISGGHFNPAVSVGLTVAGRFPAS 107 (256)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCccHHHHHHHHHHHHHHHHheeeccccceEchHHHHHHHHhcCCCHH
Confidence 56899999999999999988775331 11 111112 24577899999999999999999999999999999977 899
Q ss_pred cceeccchhhHHHHHHHHHHHHhhh
Q 025864 209 DHWVYWVGPLIGGGLAGFIYEHFFI 233 (247)
Q Consensus 209 ~~wvy~v~p~~Ga~~a~~~~~~~~~ 233 (247)
+.+.|+++|++|+++|+.+.+.++.
T Consensus 108 ~~~~YiiAQ~lGA~~ga~lv~~~~~ 132 (256)
T 3llq_A 108 SLVPYVIAQVAGAIVAAAALYVIAT 132 (256)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 9999999999999999999988874
No 17
>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A
Probab=99.49 E-value=7.3e-14 Score=121.61 Aligned_cols=103 Identities=13% Similarity=0.136 Sum_probs=86.3
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHhcCCCCC---CCCC--hhHHHHHHHHHHHHHhcCCCCCCCcchhhhHHHHHccc-C
Q 025864 133 VGYFQGIIWEIILTFSLLFTVYATIVDPKKG---SIDG--LGPLLTGFVVGANILAGGPFSGASMNPARSFGPALVSG-D 206 (247)
Q Consensus 133 ~~~~~~~~~E~~~T~~l~~~v~~~~~~~~~~---~~~~--~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~-~ 206 (247)
.+.++.++.|+++|++|++..+++....... .... ...+.+|+.+++.+++.+++||+|+|||++++.++.+. +
T Consensus 10 ~~~~r~~lAEflGT~lLv~~g~Gs~~~~~~~~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~~~g~~~ 89 (301)
T 2zz9_A 10 QAFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKIS 89 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSCCTTCC-CCCCCCHHHHHHHHHHHHHHHHHHHGGGTCCCCSHHHHHHHHHTSSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHhhheeccCCcceeChHHHHHHHHhcCCC
Confidence 3678999999999999999988754432211 1112 35678899999999999999999999999999999987 8
Q ss_pred CCcceeccchhhHHHHHHHHHHHHhhhcC
Q 025864 207 WTDHWVYWVGPLIGGGLAGFIYEHFFIVR 235 (247)
Q Consensus 207 ~~~~wvy~v~p~~Ga~~a~~~~~~~~~~~ 235 (247)
|.+...|+++|++|+++|+.+.+.++.+.
T Consensus 90 ~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~~ 118 (301)
T 2zz9_A 90 IAKSVFYITAQCLGAIIGAGILYLVTPPS 118 (301)
T ss_dssp TTTTHHHHHHHHHHHHHHHHHHHTTSCSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 99999999999999999999999887653
No 18
>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens}
Probab=99.49 E-value=2.6e-14 Score=122.70 Aligned_cols=100 Identities=18% Similarity=0.233 Sum_probs=85.6
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCC--hhHHHHHHHHHHHHHhcCCCCCCCcchhhhHHHHHccc-CCCcc
Q 025864 134 GYFQGIIWEIILTFSLLFTVYATIVDPKKGSIDG--LGPLLTGFVVGANILAGGPFSGASMNPARSFGPALVSG-DWTDH 210 (247)
Q Consensus 134 ~~~~~~~~E~~~T~~l~~~v~~~~~~~~~~~~~~--~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~-~~~~~ 210 (247)
+..+.++.|+++|++|++...++.....+.. .. ...+.+|+.+++.+++.+++||+|+|||++++.++.+. +|.+.
T Consensus 10 ~~~r~~laEfiGT~~lv~~g~g~~~~~~~~~-~~~l~ial~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~~~ 88 (266)
T 3d9s_A 10 AFLKAVFAEFLATLIFVFFGLGSALKWPSAL-PTILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRA 88 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCCSSSC-CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHTSSSCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCCC-ccHHHHHHHHHHHHHHHHHHHcccCcceECHHHHHHHHHhcCCCHHHH
Confidence 5678999999999999999988665332221 22 35678899999999999999999999999999999987 79999
Q ss_pred eeccchhhHHHHHHHHHHHHhhhc
Q 025864 211 WVYWVGPLIGGGLAGFIYEHFFIV 234 (247)
Q Consensus 211 wvy~v~p~~Ga~~a~~~~~~~~~~ 234 (247)
+.|+++|++|+++|+.+.+.++.+
T Consensus 89 ~~Yi~AQ~lGA~~ga~l~~~~~~~ 112 (266)
T 3d9s_A 89 FFYVAAQLVGAIAGAGILYGVAPL 112 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHccc
Confidence 999999999999999999988743
No 19
>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A*
Probab=99.47 E-value=5.8e-14 Score=118.58 Aligned_cols=100 Identities=23% Similarity=0.146 Sum_probs=83.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCCCCC--CCC--hhHHHHHHHHHHHHHhcCCCCCCCcchhhhHHHHHccc-CCCc
Q 025864 135 YFQGIIWEIILTFSLLFTVYATIVDPKKGS--IDG--LGPLLTGFVVGANILAGGPFSGASMNPARSFGPALVSG-DWTD 209 (247)
Q Consensus 135 ~~~~~~~E~~~T~~l~~~v~~~~~~~~~~~--~~~--~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~-~~~~ 209 (247)
..+.++.|+++|++|++..++...-.+..+ ..+ ...+.+|+.+++.+++.+++||+|+|||++++.++.++ +|.+
T Consensus 4 l~r~~~aEf~GT~~lv~~g~g~~~~~~~~~~~~~~~l~ia~~~Gl~v~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~~ 83 (234)
T 2o9g_A 4 MFRKLAAESFGTFWLVFGGSGSAVLAAGFPELGIGFAGVALAFGLTVLTMAFAVGHISGGHFNPAVTIGLWAGGRFPAKE 83 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTTCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcccCCCCCCcChHHHHHHHHHHHHHHHHHhhccCcceeCHHHHHHHHHhCCCCHHH
Confidence 578899999999999998876543222111 112 25678899999999999999999999999999999987 8999
Q ss_pred ceeccchhhHHHHHHHHHHHHhhhc
Q 025864 210 HWVYWVGPLIGGGLAGFIYEHFFIV 234 (247)
Q Consensus 210 ~wvy~v~p~~Ga~~a~~~~~~~~~~ 234 (247)
...|+++|++|+++|+.+.+.++.+
T Consensus 84 ~~~Yi~aQ~lGa~~ga~l~~~~~~~ 108 (234)
T 2o9g_A 84 VVGYVIAQVVGGIVAAALLYLIASG 108 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999888764
No 20
>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus}
Probab=99.46 E-value=6.4e-14 Score=123.20 Aligned_cols=102 Identities=13% Similarity=0.135 Sum_probs=84.4
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhcCCCC---CCCCC--hhHHHHHHHHHHHHHhcCCCCCCCcchhhhHHHHHccc-CC
Q 025864 134 GYFQGIIWEIILTFSLLFTVYATIVDPKK---GSIDG--LGPLLTGFVVGANILAGGPFSGASMNPARSFGPALVSG-DW 207 (247)
Q Consensus 134 ~~~~~~~~E~~~T~~l~~~v~~~~~~~~~---~~~~~--~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~-~~ 207 (247)
+.++.+++|+++|++|++..++++....+ ....+ ...+.+|++|++.+++.+++||+|+|||++++.++.+. +|
T Consensus 50 ~l~r~~lAEflGT~lLV~~G~Gs~a~~~~~~~~~~~g~l~Iala~GlaV~~~v~~~g~ISGAHlNPAVTlal~l~G~~~~ 129 (340)
T 3iyz_A 50 AFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISI 129 (340)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCcchHHHHHHHHHHHHHheeEeeccCcCeeChHHHHHHHHcCCCCH
Confidence 45899999999999999988876442211 11112 35677899999999999999999999999999999977 79
Q ss_pred CcceeccchhhHHHHHHHHHHHHhhhcC
Q 025864 208 TDHWVYWVGPLIGGGLAGFIYEHFFIVR 235 (247)
Q Consensus 208 ~~~wvy~v~p~~Ga~~a~~~~~~~~~~~ 235 (247)
.....|+++|++|+++|+.+.+.++.+.
T Consensus 130 ~~~~~YiiAQ~lGA~~GA~lv~~~~~~~ 157 (340)
T 3iyz_A 130 AKSVFYITAQCLGAIIGAGILYLVTPPS 157 (340)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcchh
Confidence 9999999999999999999988876543
No 21
>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum}
Probab=99.45 E-value=5.9e-14 Score=120.16 Aligned_cols=102 Identities=24% Similarity=0.207 Sum_probs=84.4
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhcC--CCCCCCCCh--hHHHHHHHHHHHHHhcCCCCCCCcchhhhHHHHHccc-CCC
Q 025864 134 GYFQGIIWEIILTFSLLFTVYATIVD--PKKGSIDGL--GPLLTGFVVGANILAGGPFSGASMNPARSFGPALVSG-DWT 208 (247)
Q Consensus 134 ~~~~~~~~E~~~T~~l~~~v~~~~~~--~~~~~~~~~--~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~-~~~ 208 (247)
+..+.++.|+++|++|++...++... +.+. ...+ ..+.+|+.+.+.+++.+++||+|+|||++++.++.++ +|.
T Consensus 8 ~~~~~~~aEflGT~~lv~~G~g~~~~~~~~~~-~~~~l~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~ 86 (258)
T 3c02_A 8 SYVREFIGEFLGTFVLMFLGEGATANFHTTGL-SGDWYKLCLGWGLAVFFGILVSAKLSGAHLNLAVSIGLSSINKFDLK 86 (258)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSS-TTCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCC-CccHHHHHHHHHHHHHHHHheecccCcCeeChHHHHHHHHhCCCcHH
Confidence 56789999999999999986654321 1111 1223 5677899999999999999999999999999999987 899
Q ss_pred cceeccchhhHHHHHHHHHHHHhhhcCc
Q 025864 209 DHWVYWVGPLIGGGLAGFIYEHFFIVRS 236 (247)
Q Consensus 209 ~~wvy~v~p~~Ga~~a~~~~~~~~~~~~ 236 (247)
+...|+++|++|+++|+.+.+.++.++.
T Consensus 87 ~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~ 114 (258)
T 3c02_A 87 KIPVYFFAQLLGAFVGTSTVYGLYHGFI 114 (258)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHHHTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcchhh
Confidence 9999999999999999999998886643
No 22
>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A
Probab=99.45 E-value=8.2e-14 Score=121.54 Aligned_cols=102 Identities=21% Similarity=0.247 Sum_probs=84.3
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhcC---CC-CCCCCC--hhHHHHHHHHHHHHHhcCCCCCCCcchhhhHHHHHccc-C
Q 025864 134 GYFQGIIWEIILTFSLLFTVYATIVD---PK-KGSIDG--LGPLLTGFVVGANILAGGPFSGASMNPARSFGPALVSG-D 206 (247)
Q Consensus 134 ~~~~~~~~E~~~T~~l~~~v~~~~~~---~~-~~~~~~--~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~-~ 206 (247)
+..+.++.|+++|++|++...++... .+ +....+ ...+.+|+.+++.+++.+++||+|+|||++++.++.+. +
T Consensus 59 ~~~r~~lAEfiGT~lLv~~g~gsv~~~~~~~~~~~~~g~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~l~g~~~ 138 (304)
T 3cn5_A 59 SFWRAAIAEFIATLLFLYITVATVIGHSKETVVCGSVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVE 138 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSTTCSCHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHHHHTTSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHeEeccccCCCCCCCceeehhhhhhhhheeeeEeeccCCCccCcHHHHHHHHhCCCC
Confidence 56889999999999999988764332 11 111112 24677899999999999999999999999999999987 7
Q ss_pred CCcceeccchhhHHHHHHHHHHHHhhhcC
Q 025864 207 WTDHWVYWVGPLIGGGLAGFIYEHFFIVR 235 (247)
Q Consensus 207 ~~~~wvy~v~p~~Ga~~a~~~~~~~~~~~ 235 (247)
|.+...|+++|++|+++|+.+.+.++.++
T Consensus 139 ~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~~ 167 (304)
T 3cn5_A 139 LLRALVYMIAQCLGAICGVGLVKAFMKGP 167 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 99999999999999999999999887654
No 23
>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens}
Probab=99.45 E-value=8.1e-14 Score=116.82 Aligned_cols=101 Identities=13% Similarity=0.141 Sum_probs=83.7
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhcCCCC---CCCCC--hhHHHHHHHHHHHHHhcCCCCCCCcchhhhHHHHHccc-CC
Q 025864 134 GYFQGIIWEIILTFSLLFTVYATIVDPKK---GSIDG--LGPLLTGFVVGANILAGGPFSGASMNPARSFGPALVSG-DW 207 (247)
Q Consensus 134 ~~~~~~~~E~~~T~~l~~~v~~~~~~~~~---~~~~~--~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~-~~ 207 (247)
+.+|.++.|+++|++|++...++.....+ .+..+ ...+.+|+.+.+.+++.+++||+|+|||++++..+.++ +|
T Consensus 2 ~~~r~~~aEfiGT~~lv~~g~g~~~~~~~~~~~~~~~~~~ia~~~Gl~v~~~v~~~g~iSGaHlNPAVTla~~~~g~~~~ 81 (223)
T 3gd8_A 2 AFWKAVTAEFLAMLIFVLLSLGSTINWGGTEKPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISI 81 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCTTTTTSCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCcchHHHHHHHHHHHHHHHheecccccceEcHHHHHHHHHcCCCCH
Confidence 35789999999999999988886543211 11122 35677899999999999999999999999999999877 79
Q ss_pred CcceeccchhhHHHHHHHHHHHHhhhc
Q 025864 208 TDHWVYWVGPLIGGGLAGFIYEHFFIV 234 (247)
Q Consensus 208 ~~~wvy~v~p~~Ga~~a~~~~~~~~~~ 234 (247)
.+...|+++|++|+++++.+.+.++.+
T Consensus 82 ~~~~~Yi~AQ~lGA~~ga~lv~~~~~~ 108 (223)
T 3gd8_A 82 AKSVFYIAAQCLGAIIGAGILYLVTPP 108 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 999999999999999999998887654
No 24
>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A
Probab=99.44 E-value=1.3e-13 Score=118.78 Aligned_cols=101 Identities=18% Similarity=0.283 Sum_probs=83.3
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhcCC------CC--CCCCC--hhHHHHHHHHHHHHHhcCCCCCCCcchhhhHHHHHc
Q 025864 134 GYFQGIIWEIILTFSLLFTVYATIVDP------KK--GSIDG--LGPLLTGFVVGANILAGGPFSGASMNPARSFGPALV 203 (247)
Q Consensus 134 ~~~~~~~~E~~~T~~l~~~v~~~~~~~------~~--~~~~~--~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~ 203 (247)
+.++.++.|+++|++|++..+++.... ++ ..... ...+.+|+.+++.+++.+++||+|+|||++++.++.
T Consensus 9 ~~~r~~~aEflGT~llv~~g~g~~~~~~~~~~~~~~~g~~~~~~~ial~~Gl~v~~~i~~~g~iSGaHlNPAVTla~~~~ 88 (271)
T 1j4n_A 9 LFWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLS 88 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHGGGCCCSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCcccchHHHHHHHHHHHHHHHHHHhcCCcceEcHHHHHHHHHc
Confidence 467899999999999999877754311 11 11112 356788999999999999999999999999999999
Q ss_pred cc-CCCcceeccchhhHHHHHHHHHHHHhhhc
Q 025864 204 SG-DWTDHWVYWVGPLIGGGLAGFIYEHFFIV 234 (247)
Q Consensus 204 ~~-~~~~~wvy~v~p~~Ga~~a~~~~~~~~~~ 234 (247)
+. +|.+...|+++|++|+++|+.+.+.++.+
T Consensus 89 g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~ 120 (271)
T 1j4n_A 89 CQISVLRAIMYIIAQCVGAIVATAILSGITSS 120 (271)
T ss_dssp TSSCHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 77 89999999999999999999999888743
No 25
>1ldf_A Glycerol uptake facilitator protein; glycerol-conducting membrane channel protein, transport PROT; HET: BOG; 2.10A {Escherichia coli} SCOP: f.19.1.1 PDB: 1fx8_A* 1lda_A* 1ldi_A*
Probab=99.42 E-value=1.4e-13 Score=119.17 Aligned_cols=102 Identities=20% Similarity=0.108 Sum_probs=83.8
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhcC--CCCCCCC-ChhHHHHHHHHHHHHHhcCCCCCCCcchhhhHHHHHccc-CCCc
Q 025864 134 GYFQGIIWEIILTFSLLFTVYATIVD--PKKGSID-GLGPLLTGFVVGANILAGGPFSGASMNPARSFGPALVSG-DWTD 209 (247)
Q Consensus 134 ~~~~~~~~E~~~T~~l~~~v~~~~~~--~~~~~~~-~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~-~~~~ 209 (247)
+..+.++.|+++|++|++...++... ..+.+.+ ....+.+|+.+.+.+++.+++||+|+|||++++..+.+. +|.+
T Consensus 6 ~~~~~~laEflGT~~Lv~~G~g~~~~~~l~~~~~g~~~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~~ 85 (281)
T 1ldf_A 6 TLKGQCIAEFLGTGLLIFFGVGCVAALKVAGASFGQWEISVIFGLGVAMAIYLTAGVSGAHLNPAVTIALWLFACFDKRK 85 (281)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHSCCCTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHhheecccCcCeeChHHHHHHHHcCCCCHHH
Confidence 56889999999999999977654321 0111111 135778899999999999999999999999999999987 8999
Q ss_pred ceeccchhhHHHHHHHHHHHHhhhcC
Q 025864 210 HWVYWVGPLIGGGLAGFIYEHFFIVR 235 (247)
Q Consensus 210 ~wvy~v~p~~Ga~~a~~~~~~~~~~~ 235 (247)
...|+++|++|+++|+.+.+.++.++
T Consensus 86 ~~~Yi~AQ~lGA~~ga~l~~~~~~~~ 111 (281)
T 1ldf_A 86 VIPFIVSQVAGAFCAAALVYGLYYNL 111 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 99999999999999999998887653
No 26
>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A*
Probab=99.42 E-value=5.5e-13 Score=115.17 Aligned_cols=102 Identities=17% Similarity=0.164 Sum_probs=82.7
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHh--cCCCC----CCCC--C--hhHHHHHHHHHHHHHhcCCCCCCCcchhhhHHHHHc
Q 025864 134 GYFQGIIWEIILTFSLLFTVYATI--VDPKK----GSID--G--LGPLLTGFVVGANILAGGPFSGASMNPARSFGPALV 203 (247)
Q Consensus 134 ~~~~~~~~E~~~T~~l~~~v~~~~--~~~~~----~~~~--~--~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~ 203 (247)
+..+.++.|+++|++|++..++.+ ..... .... . ...+.+|+.+++.+++.+++||+|+|||++++..+.
T Consensus 43 ~~~r~~laEfiGT~~Lv~~g~g~~~~~~~~~~~~~~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~~~ 122 (279)
T 2w2e_A 43 NHFIAMSGEFVGTFLFLWSAFVIAQIANQAPETPDGGSNPAQLIMISFGFGFGVMVGVFITYRVSGGNLNPAVTLALVLA 122 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCGGGCCCHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCccHHHHHHHHHHHHHHHHHHHhhcCccccChHHHHHHHHc
Confidence 567889999999999998876532 11110 0111 1 256778999999999999999999999999999999
Q ss_pred cc-CCCcceeccchhhHHHHHHHHHHHHhhhcC
Q 025864 204 SG-DWTDHWVYWVGPLIGGGLAGFIYEHFFIVR 235 (247)
Q Consensus 204 ~~-~~~~~wvy~v~p~~Ga~~a~~~~~~~~~~~ 235 (247)
+. +|.+...|+++|++|+++|+.+.+.++.+.
T Consensus 123 g~~~~~~~~~YiiAQ~lGA~~ga~lv~~~~~~~ 155 (279)
T 2w2e_A 123 RAIPPFRGILMAFTQIVAGMAAAGAASAMTPGE 155 (279)
T ss_dssp TSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCSS
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHcccc
Confidence 87 899999999999999999999999887543
No 27
>3kcu_A Probable formate transporter 1; TCDB ID 2.A.44.1.1, channel, cell inner membrane, cell membrane, membrane, transmembrane; HET: MA5; 2.24A {Escherichia coli O157} PDB: 3kcv_A 3q7k_A
Probab=86.30 E-value=14 Score=31.22 Aligned_cols=99 Identities=10% Similarity=0.239 Sum_probs=54.7
Q ss_pred HHHHHHHHHHHHHHHHHHh--hcCCCCCchHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHHHHHHHh---CCC--CCC
Q 025864 53 LFFVAVAHAFVVAVMISAG--HISGGHLNPAVTLGLLFGGHITFFRSILYWIDQLLASSAACFLLSYLT---GGL--STP 125 (247)
Q Consensus 53 ~~~~~l~~g~~~~~~i~~~--~iSG~h~NPavTla~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~---~~~--~~~ 125 (247)
.+..++.+.+++.+.+... =.|| |--.++ ..+.||.+|.+.+--|.-=.+|-++|+.+.-++. +.. ..+
T Consensus 68 ~ll~g~~F~vGL~lVvl~G~ELFTg---n~l~~~-a~~~~~is~~~~lr~W~~v~~gNliGal~~a~l~~~s~~~~~~~~ 143 (285)
T 3kcu_A 68 KLVGGICFSLGLILCVVCGADLFTS---TVLIVV-AKASGRITWGQLAKNWLNVYFGNLVGALLFVLLMWLSGEYMTANG 143 (285)
T ss_dssp HHHHHHHHTHHHHHHHHHTCCCTTT---THHHHH-HHTTTCCCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHTGGGTTTT
T ss_pred HHHHHHHHHHHHHHHHHhCcccccc---chHHHH-HHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccCch
Confidence 4455677777777777665 4444 322333 3568888988766555555566666655544331 110 000
Q ss_pred e---e-----ecCCCCchHHHHHHHHHHHHHHHHHHHH
Q 025864 126 V---H-----TLASGVGYFQGIIWEIILTFSLLFTVYA 155 (247)
Q Consensus 126 ~---~-----~~~~~~~~~~~~~~E~~~T~~l~~~v~~ 155 (247)
. . .-.-+.+..+.|+-=.+|-++..+.+..
T Consensus 144 ~~~~~~~~ia~~K~~~~~~~~f~~GIlcN~lVclaVw~ 181 (285)
T 3kcu_A 144 QWGLNVLQTADHKVHHTFIEAVCLGILANLMVCLAVWM 181 (285)
T ss_dssp HHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0 0112346677777777777777666665
No 28
>3tds_E Formate/nitrite transporter; membrane protein; HET: PG4 BOG; 1.98A {Clostridium difficile} PDB: 3tdo_A* 3tdr_A* 3te0_A* 3tdx_A* 3te2_A* 3te1_A* 3tdp_A*
Probab=77.29 E-value=31 Score=28.86 Aligned_cols=102 Identities=12% Similarity=0.201 Sum_probs=56.7
Q ss_pred chHHHHHHHHHHHHHHHHHHh--hcCCCCCchHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHHHHHHHhC--CCC-CC
Q 025864 51 VGLFFVAVAHAFVVAVMISAG--HISGGHLNPAVTLGLLFGGHITFFRSILYWIDQLLASSAACFLLSYLTG--GLS-TP 125 (247)
Q Consensus 51 ~~~~~~~l~~g~~~~~~i~~~--~iSG~h~NPavTla~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~--~~~-~~ 125 (247)
...+..++.+.+++.+.+... =.|| |-.......+.||.+|.+.+--|.-=.+|-++|+.+.-++.. +.. .+
T Consensus 62 ~~~ll~g~~F~~Gl~lVvl~g~eLfTg---n~l~~~~~~~~~~~s~~~~lr~W~~v~~gNliGa~~~a~l~~~sg~~~~~ 138 (268)
T 3tds_E 62 MTKIVMGLSFAIALSLVIMTGTELFTG---NNMVMSAGMLNKGVSIKDTSKIWAYSWVGNLIGALVLGIIFVGTGLVDKG 138 (268)
T ss_dssp THHHHHHHTCTHHHHHHHHHTCCCHHH---HHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSSS
T ss_pred HHHHHHHHHHHHHHHHHHHhCcccccc---chHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCCCc
Confidence 344555666666666666554 2222 433222345788999988877777667777777766544431 111 11
Q ss_pred ee-----ec---CCCCchHHHHHHHHHHHHHHHHHHHH
Q 025864 126 VH-----TL---ASGVGYFQGIIWEIILTFSLLFTVYA 155 (247)
Q Consensus 126 ~~-----~~---~~~~~~~~~~~~E~~~T~~l~~~v~~ 155 (247)
.. .. .-+.+..+.|+-=.+|-++..+.+..
T Consensus 139 ~~~~~~~~ia~~K~~~~~~~~f~~gIlcN~lVclaVw~ 176 (268)
T 3tds_E 139 PVAEFFANTAASKASMPFTALFFRGILCNILVCVSVLC 176 (268)
T ss_dssp HHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 00 00 11235566676667777766666665
No 29
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=47.13 E-value=3.8 Score=35.55 Aligned_cols=20 Identities=30% Similarity=0.451 Sum_probs=16.7
Q ss_pred hcCCCCCchHHHHHHHHhcC
Q 025864 72 HISGGHLNPAVTLGLLFGGH 91 (247)
Q Consensus 72 ~iSG~h~NPavTla~~l~g~ 91 (247)
.-||||++|+++++-.+..+
T Consensus 10 GGTgGHi~palala~~L~~~ 29 (365)
T 3s2u_A 10 GGTGGHVFPALACAREFQAR 29 (365)
T ss_dssp CSSHHHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHHHhC
Confidence 44789999999999888654
No 30
>4fc4_A Nitrite transporter NIRC; alpha-helical inner membrane protein, ION channel, cytoplasm membrane, transport protein; HET: BOG; 2.40A {Salmonella enterica subsp}
Probab=43.63 E-value=73 Score=26.42 Aligned_cols=100 Identities=12% Similarity=0.141 Sum_probs=51.5
Q ss_pred HHHHHHHHHHHHHHHHHHh--hcCCCCCchHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHHHHHHHhC--C-CCCCe-
Q 025864 53 LFFVAVAHAFVVAVMISAG--HISGGHLNPAVTLGLLFGGHITFFRSILYWIDQLLASSAACFLLSYLTG--G-LSTPV- 126 (247)
Q Consensus 53 ~~~~~l~~g~~~~~~i~~~--~iSG~h~NPavTla~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~--~-~~~~~- 126 (247)
.+..++.+++++.+.+... =.|| |-.......+.||.+|.+.+--|.-=.+|-++|+.+.-++.. + ...+.
T Consensus 58 ~ll~g~~F~vGl~lVvl~g~eLfTg---n~l~~~~~~~~~~~s~~~~lr~W~~v~~gNliGa~~~a~l~~~~g~~~~~~~ 134 (261)
T 4fc4_A 58 PLVMGATFGIALTLVIIAGSELFTG---HTMFLTLGVKAGTISHGQMWAILPQTWLGNLVGSVFVALLYSWGGGSLLPVD 134 (261)
T ss_dssp HHHHHHHTTHHHHHHHHTCCCCHHH---HHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTSSCT
T ss_pred HHHHHHHHHHHHHHHHHcCCccccc---chHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccCchH
Confidence 3445566666655555543 2222 433333345678899988877776666666666665443321 1 10100
Q ss_pred --e--ecC---CCCchHHHHHHHHHHHHHHHHHHHH
Q 025864 127 --H--TLA---SGVGYFQGIIWEIILTFSLLFTVYA 155 (247)
Q Consensus 127 --~--~~~---~~~~~~~~~~~E~~~T~~l~~~v~~ 155 (247)
. ... -+.+..+.|+-=.+|-++..+.+..
T Consensus 135 ~~~~~~ia~~K~~~~~~~~f~~gIlcN~lVclaVw~ 170 (261)
T 4fc4_A 135 TSIVHSVALAKTTAPATVLFFKGALCNWLVCLAIWM 170 (261)
T ss_dssp TSHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHH
Confidence 0 000 0124456666666666666665555
No 31
>3kly_A Putative formate transporter 1; membrane protein, channel, structural genomics, PSI-2, protein structure initiative; HET: BOG; 2.10A {Vibrio cholerae} PDB: 3klz_A*
Probab=30.66 E-value=2.3e+02 Score=23.53 Aligned_cols=99 Identities=9% Similarity=0.200 Sum_probs=57.6
Q ss_pred HHHHHHHHHHHHHHHHHHh--hcCCCCCchHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHHHHHHHh---CCC--CCC
Q 025864 53 LFFVAVAHAFVVAVMISAG--HISGGHLNPAVTLGLLFGGHITFFRSILYWIDQLLASSAACFLLSYLT---GGL--STP 125 (247)
Q Consensus 53 ~~~~~l~~g~~~~~~i~~~--~iSG~h~NPavTla~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~---~~~--~~~ 125 (247)
.+..++.+.+++.+.+... =.||--+- ++ ..+.||.+|.+.+--|.-=.+|-++|+.+.-++. +.. ..+
T Consensus 67 ~ll~g~~F~vGL~lVvl~g~ELFTgn~l~---~~-~~~~~~is~~~~lr~W~~v~~gNliGal~~a~l~~~s~~~~~~~~ 142 (280)
T 3kly_A 67 KLLGGLAFSLGLILVVITGGELFTSSVLI---LV-AKASGKISWKELVRNWTVVYFGNLCGSIILVFIMLATRQFMEDGG 142 (280)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCCTTTTCCC---CS-SSSSSSCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGTTTT
T ss_pred HHHHHHHHHHHHHHHHHccccccccchHH---HH-HHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccCCch
Confidence 4455677777777777776 55554442 22 3457888888877666666667777666554432 110 010
Q ss_pred e---e-----ecCCCCchHHHHHHHHHHHHHHHHHHHH
Q 025864 126 V---H-----TLASGVGYFQGIIWEIILTFSLLFTVYA 155 (247)
Q Consensus 126 ~---~-----~~~~~~~~~~~~~~E~~~T~~l~~~v~~ 155 (247)
. . .-.-+.+..+.|+-=.+|-++..+.+..
T Consensus 143 ~~~~~~~~ia~~K~~~~~~~~f~~GIlcN~lVclaVw~ 180 (280)
T 3kly_A 143 QLGLNAMAISQHKLHHTFLQAFALGLMCNILVCLAVWM 180 (280)
T ss_dssp HHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0 1112346677777777777777766665
Done!