Query 025865
Match_columns 247
No_of_seqs 212 out of 1413
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 19:20:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025865.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025865hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3gd8_A Aquaporin-4; proton exc 100.0 1.2E-53 4.2E-58 358.5 20.9 220 14-237 1-223 (223)
2 3iyz_A Aquaporin-4; water tran 100.0 5.2E-53 1.8E-57 370.1 22.0 225 11-239 46-273 (340)
3 2w2e_A AQY1, aquaporin, aquapo 100.0 1.6E-52 5.5E-57 361.7 23.5 231 13-245 41-274 (279)
4 1j4n_A Aquaporin 1; membrane p 100.0 1.1E-52 3.8E-57 362.0 21.7 230 9-239 3-237 (271)
5 2zz9_A Aquaporin-4; water tran 100.0 1.8E-52 6.1E-57 363.8 21.3 227 8-238 4-233 (301)
6 2b6o_A Aquaporin-0, lens fiber 100.0 9.3E-52 3.2E-56 354.8 24.3 223 9-239 2-227 (263)
7 3d9s_A Aquaporin-5, AQP-5; aqu 100.0 3E-52 1E-56 358.0 20.6 224 9-240 4-231 (266)
8 3cn5_A Aquaporin; membrane pro 100.0 3.7E-52 1.3E-56 362.6 15.8 227 9-238 53-290 (304)
9 1ldf_A Glycerol uptake facilit 100.0 1.8E-50 6E-55 350.3 20.4 223 12-240 3-260 (281)
10 2o9g_A Aquaporin Z; integral m 100.0 2.2E-50 7.4E-55 341.2 20.3 216 15-237 3-232 (234)
11 3llq_A Aquaporin Z 2; aquapori 100.0 2E-50 6.9E-55 343.8 19.8 217 12-235 25-253 (256)
12 2f2b_A Aquaporin AQPM; protein 100.0 4.9E-50 1.7E-54 341.7 21.3 220 15-236 3-245 (246)
13 3c02_A Aquaglyceroporin; membr 100.0 8.4E-51 2.9E-55 348.4 11.8 224 13-242 6-249 (258)
14 2f2b_A Aquaporin AQPM; protein 99.7 3.4E-16 1.1E-20 132.9 11.8 102 12-123 139-245 (246)
15 2b6o_A Aquaporin-0, lens fiber 99.6 2.6E-15 8.9E-20 128.5 7.3 102 137-239 8-112 (263)
16 3llq_A Aquaporin Z 2; aquapori 99.5 2.6E-14 8.8E-19 121.4 7.4 100 137-236 28-132 (256)
17 2zz9_A Aquaporin-4; water tran 99.5 9.7E-14 3.3E-18 120.4 8.7 103 136-238 10-118 (301)
18 3c02_A Aquaglyceroporin; membr 99.4 3E-14 1E-18 121.6 3.8 102 137-239 8-114 (258)
19 2o9g_A Aquaporin Z; integral m 99.4 3.8E-13 1.3E-17 113.2 9.7 101 13-124 131-232 (234)
20 1j4n_A Aquaporin 1; membrane p 99.4 1.6E-13 5.5E-18 117.8 7.2 101 137-237 9-120 (271)
21 3d9s_A Aquaporin-5, AQP-5; aqu 99.4 7.7E-13 2.6E-17 113.2 11.4 102 12-123 125-227 (266)
22 3gd8_A Aquaporin-4; proton exc 99.4 1.1E-12 3.6E-17 109.7 10.5 101 12-122 121-221 (223)
23 2w2e_A AQY1, aquaporin, aquapo 99.4 1.5E-12 5.1E-17 112.1 11.1 101 13-123 165-265 (279)
24 3cn5_A Aquaporin; membrane pro 99.4 1.8E-13 6.1E-18 119.0 5.4 102 137-238 59-167 (304)
25 1ldf_A Glycerol uptake facilit 99.4 2.1E-13 7.1E-18 117.8 5.4 102 137-238 6-111 (281)
26 3iyz_A Aquaporin-4; water tran 99.4 1.5E-12 5.3E-17 114.0 10.5 101 13-123 170-270 (340)
27 3kcu_A Probable formate transp 89.9 6 0.0002 33.5 12.5 141 13-159 28-182 (285)
28 3tds_E Formate/nitrite transpo 76.4 32 0.0011 28.7 11.7 105 53-159 62-177 (268)
29 4fc4_A Nitrite transporter NIR 71.5 43 0.0015 27.8 11.3 101 56-159 59-171 (261)
30 3kly_A Putative formate transp 65.9 59 0.002 27.2 11.1 140 14-159 28-181 (280)
31 3s2u_A UDP-N-acetylglucosamine 47.2 4 0.00014 35.3 -0.0 19 76-94 11-29 (365)
No 1
>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.2e-53 Score=358.48 Aligned_cols=220 Identities=41% Similarity=0.698 Sum_probs=192.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCchHHHHHHHHHHHHHHHHHHhcCCCcccchHHHHHHHHhC
Q 025865 14 LGSFKAYLAEFISTLLFVFAGVGSAIAFNKVTADAALDPSGLVAIAICHGFALFVAVAVGANISGGHVNPAVTFGLALGG 93 (247)
Q Consensus 14 ~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSG~h~NPavTl~~~l~g 93 (247)
+++||++++||+||++|++++++++.... ++.+....+++.+++++|+++++.+++++++||+|+|||||+++++.|
T Consensus 1 ~~~~r~~~aEfiGT~~lv~~g~g~~~~~~---~~~~~~~~~~~~ia~~~Gl~v~~~v~~~g~iSGaHlNPAVTla~~~~g 77 (223)
T 3gd8_A 1 QAFWKAVTAEFLAMLIFVLLSLGSTINWG---GTEKPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTR 77 (223)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHTCCTT---TTTSCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcc---cCCCCCCcchHHHHHHHHHHHHHHHheecccccceEcHHHHHHHHHcC
Confidence 46799999999999999999999886431 111224567899999999999999999999999999999999999999
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHHHHHHhcCC---CCceeccCCCCchhHHHHHHHHHHHHHHHHHHHhccCCCCCCCCC
Q 025865 94 QITILTGIFYWIAQLLGSIVASFLLKVVTGGL---AVPTHNVAAGVGAIEGVVMEIIITFGLVYTVYATAADPKKGSLGT 170 (247)
Q Consensus 94 ~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~E~~~T~~l~~~i~~~~~~~~~~~~~~ 170 (247)
+++|++.+.|+++|++|+++|+.+++.++++. ..+.+.+.++.+..++++.|+++||+|+++++.+. |+++...+.
T Consensus 78 ~~~~~~~~~Yi~AQ~lGA~~ga~lv~~~~~~~~~~~lg~~~~~~~~s~~~~~~~E~i~Tf~Lv~~i~~~~-~~~~~~~~~ 156 (223)
T 3gd8_A 78 KISIAKSVFYIAAQCLGAIIGAGILYLVTPPSVVGGLGVTMVHGNLTAGHGLLVELIITFQLVFTIFASC-DSKRTDVTG 156 (223)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHTTTTCCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHT-CTTCSCCCS
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHhhcccccccceeeccCCCccCHHHHHHHHHHHHHHHHHHHHHHh-ccccCCccC
Confidence 99999999999999999999999999887632 23445566778899999999999999999999984 444433445
Q ss_pred hhHHHHHHHHHHHHHhhcCCCCCCcChhhhHHHHhccCCCCceeeeeccccHHHHHHHHHHHHHhcC
Q 025865 171 IAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWVGPLIGGGLAGLIYGNVFMH 237 (247)
Q Consensus 171 ~~~~~ig~~v~~~~~~~~~~sG~~lNPAr~lg~~~~~~~~~~~wvy~~~p~~Ga~~a~~~~~~~~~~ 237 (247)
..|+.||+.+......+++.||++||||||||||++.++|+++|+||++|++|+++++++|++++.|
T Consensus 157 ~~pl~iGl~v~~~~~~g~~~TG~a~NPAR~~GP~l~~~~w~~~Wvy~vgP~~Ga~la~~~y~~~~~p 223 (223)
T 3gd8_A 157 SIALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGGLYEYVFCP 223 (223)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTCCTTTTHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CccHHHHHHHHHHHHhccCCccccccHHHHHHHHHHhcCCCcEEeehhHHHHHHHHHHHHHHHHcCC
Confidence 7899999999888888878899999999999999999999999999999999999999999998754
No 2
>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus}
Probab=100.00 E-value=5.2e-53 Score=370.08 Aligned_cols=225 Identities=40% Similarity=0.698 Sum_probs=195.2
Q ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCchHHHHHHHHHHHHHHHHHHhcCCCcccchHHHHHHH
Q 025865 11 SFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKVTADAALDPSGLVAIAICHGFALFVAVAVGANISGGHVNPAVTFGLA 90 (247)
Q Consensus 11 ~~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSG~h~NPavTl~~~ 90 (247)
..+++++|++++||+|||+|+|++++++.... ......+.+++.+++++|+++++.+++++++||||+|||||++++
T Consensus 46 ~~~~~l~r~~lAEflGT~lLV~~G~Gs~a~~~---~~~~~~~~g~l~Iala~GlaV~~~v~~~g~ISGAHlNPAVTlal~ 122 (340)
T 3iyz_A 46 VWTQAFWKAVTAEFLAMLIFVLLSVGSTINWG---GSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMV 122 (340)
T ss_pred hchHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---cCCCCCCcchHHHHHHHHHHHHHheeEeeccCcCeeChHHHHHHH
Confidence 34457899999999999999999999987431 111223467889999999999999999999999999999999999
Q ss_pred HhCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCC---CceeccCCCCchhHHHHHHHHHHHHHHHHHHHhccCCCCCC
Q 025865 91 LGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLA---VPTHNVAAGVGAIEGVVMEIIITFGLVYTVYATAADPKKGS 167 (247)
Q Consensus 91 l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~E~~~T~~l~~~i~~~~~~~~~~~ 167 (247)
+.|+++|.+++.|+++|++||++|+.+++.++++.. .+.+.+.++.+..++++.|+++||+|+++++.+. |+++..
T Consensus 123 l~G~~~~~~~~~YiiAQ~lGA~~GA~lv~~~~~~~~~~~lg~~~~~~~~s~~~~f~~E~i~Tf~Lv~~Ila~~-d~~~~~ 201 (340)
T 3iyz_A 123 CTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASC-DDKRTD 201 (340)
T ss_pred HcCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcchhhcCceeeccCCCccCHHHHHHHHHHHHHHHHHHHHHhh-cCccCC
Confidence 999999999999999999999999999999886432 2344556678899999999999999999999984 444333
Q ss_pred CCChhHHHHHHHHHHHHHhhcCCCCCCcChhhhHHHHhccCCCCceeeeeccccHHHHHHHHHHHHHhcCCC
Q 025865 168 LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWVGPLIGGGLAGLIYGNVFMHSE 239 (247)
Q Consensus 168 ~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPAr~lg~~~~~~~~~~~wvy~~~p~~Ga~~a~~~~~~~~~~~~ 239 (247)
.....|+.||+++.+....++++||++|||||||||+++.++|.++||||++|++|+++|+++|++++.|..
T Consensus 202 ~~~~~pl~IGl~v~i~~~~g~~~TG~amNPARdlGPal~~~~w~~~WVywvgPiiGailaallY~~l~~p~~ 273 (340)
T 3iyz_A 202 VTGSVALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGALYEYVFCPDV 273 (340)
T ss_pred cccchhhHHHHHHHHHHHhccCCccccccHHHHHHHHHHccCCCcEeehhHHHHHHHHHHHHHHHHHhCCCh
Confidence 345789999999988888888999999999999999999999999999999999999999999999987654
No 3
>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A*
Probab=100.00 E-value=1.6e-52 Score=361.66 Aligned_cols=231 Identities=30% Similarity=0.469 Sum_probs=195.7
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHhhh-cccc-ccCCCCCCCchHHHHHHHHHHHHHHHHHHhcCCCcccchHHHHHHH
Q 025865 13 SLGSFKAYLAEFISTLLFVFAGVGSAIA-FNKV-TADAALDPSGLVAIAICHGFALFVAVAVGANISGGHVNPAVTFGLA 90 (247)
Q Consensus 13 ~~~~~~~~~~EfigT~~lv~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSG~h~NPavTl~~~ 90 (247)
-++.+|++++||+|||+|+|+++++... .... .++......+++.+++++|+++++.+++++++||||+|||||++++
T Consensus 41 ~~~~~r~~laEfiGT~~Lv~~g~g~~~~~~~~~~~~~~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~ 120 (279)
T 2w2e_A 41 VRNHFIAMSGEFVGTFLFLWSAFVIAQIANQAPETPDGGSNPAQLIMISFGFGFGVMVGVFITYRVSGGNLNPAVTLALV 120 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCGGGCCCHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCccHHHHHHHHHHHHHHHHHHHhhcCccccChHHHHHHH
Confidence 3467899999999999999999986422 2111 1111123346788999999999999999999999999999999999
Q ss_pred HhCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCCCceeccCCCCchhHHHHHHHHHHHHHHHHHHHhccCCCCCCCCC
Q 025865 91 LGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNVAAGVGAIEGVVMEIIITFGLVYTVYATAADPKKGSLGT 170 (247)
Q Consensus 91 l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~l~~~i~~~~~~~~~~~~~~ 170 (247)
+.|+++|++++.|+++|++|+++|+.+++.++++.......+.++.+..++++.|+++||+|+++++.++.++++ .+.
T Consensus 121 ~~g~~~~~~~~~YiiAQ~lGA~~ga~lv~~~~~~~~~~~t~~~~~~s~~~~~~~E~i~Tf~Lv~~Il~~~~~~~~--~~~ 198 (279)
T 2w2e_A 121 LARAIPPFRGILMAFTQIVAGMAAAGAASAMTPGEIAFANALGGGASRTRGLFLEAFGTAILCLTVLMLAVEKHR--ATW 198 (279)
T ss_dssp HTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCSSCCCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHTTSCST--TGG
T ss_pred HcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHccccceeeccCCccccHHHHHHHHHHHHHHHHHHHHHHccCCCC--CcC
Confidence 999999999999999999999999999999987654333344556788999999999999999999998655543 345
Q ss_pred hhHHHHHHHHHHHHHhhcCCCCCCcChhhhHHHHhccCCC-CceeeeeccccHHHHHHHHHHHHHhcCCCCCCCCC
Q 025865 171 IAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNF-QDNWIYWVGPLIGGGLAGLIYGNVFMHSEHAPLSN 245 (247)
Q Consensus 171 ~~~~~ig~~v~~~~~~~~~~sG~~lNPAr~lg~~~~~~~~-~~~wvy~~~p~~Ga~~a~~~~~~~~~~~~~~~~~~ 245 (247)
+.|+.||+.+....++.++.||+++|||||||||++.+.| +++|+||++|++|+++++++|+++...+.++..|.
T Consensus 199 ~~pl~IGl~v~~~~l~~g~~TG~s~NPAR~~GPal~~~~~~~~~WVy~vgPiiGa~la~~ly~~l~~~~~~~~~p~ 274 (279)
T 2w2e_A 199 FAPFVIGIALLIAHLICIYYTGAGLNPARSFGPAVAARSFPNYHWIYWLGPILGAFLAYSIWQMWKWLNYQTTNPG 274 (279)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHHTCCCTTTTHHHHHHHHHHHHHHHHHHHHHHTTTTCSCC-
T ss_pred cHHHHHHHHHHHHHHhcccccccccChHHHHHHHHHhccchhhhhHHHHHHHHHHHHHHHHHHHHHccCCCcCCCC
Confidence 8999999999999999999999999999999999998765 68999999999999999999999998877765554
No 4
>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A
Probab=100.00 E-value=1.1e-52 Score=362.00 Aligned_cols=230 Identities=39% Similarity=0.644 Sum_probs=197.3
Q ss_pred CCcCChhHHHHHHHHHHHHHHHHHHHHHHhhhccccc--cCCCCCCCchHHHHHHHHHHHHHHHHHHhcCCCcccchHHH
Q 025865 9 DDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKVT--ADAALDPSGLVAIAICHGFALFVAVAVGANISGGHVNPAVT 86 (247)
Q Consensus 9 ~~~~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSG~h~NPavT 86 (247)
+|.++++++|++++||+||++|+|++++++....... +.......+++.+++++|+++++.+++++++||||+|||||
T Consensus 3 ~e~~~~~~~r~~~aEflGT~llv~~g~g~~~~~~~~~~~~~~~g~~~~~~~ial~~Gl~v~~~i~~~g~iSGaHlNPAVT 82 (271)
T 1j4n_A 3 SEFKKKLFWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVT 82 (271)
T ss_dssp STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCCCSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCcccchHHHHHHHHHHHHHHHHHHhcCCcceEcHHHH
Confidence 5667788999999999999999999999886543211 11111234688899999999999999999999999999999
Q ss_pred HHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCC---CCceeccCCCCchhHHHHHHHHHHHHHHHHHHHhccCC
Q 025865 87 FGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGL---AVPTHNVAAGVGAIEGVVMEIIITFGLVYTVYATAADP 163 (247)
Q Consensus 87 l~~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~E~~~T~~l~~~i~~~~~~~ 163 (247)
+++++.|+++|++++.|+++|++|+++|+.+++.++++. ..+.+.+.++.+..++++.|+++|++|+++++++ .|+
T Consensus 83 la~~~~g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~E~i~T~~Lv~~i~~~-~d~ 161 (271)
T 1j4n_A 83 LGLLLSCQISVLRAIMYIIAQCVGAIVATAILSGITSSLPDNSLGLNALAPGVNSGQGLGIEIIGTLQLVLCVLAT-TDR 161 (271)
T ss_dssp HHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHTTTCTTCCTTCCCCCTTCCTTGGGHHHHHHHHHHHHHHHHH-TCS
T ss_pred HHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHccCCcccccccccCCCccchHHHHHHHHHHHHHHHHHHHhh-ccc
Confidence 999999999999999999999999999999999988532 2334455667788899999999999999999987 455
Q ss_pred CCCCCCChhHHHHHHHHHHHHHhhcCCCCCCcChhhhHHHHhccCCCCceeeeeccccHHHHHHHHHHHHHhcCCC
Q 025865 164 KKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWVGPLIGGGLAGLIYGNVFMHSE 239 (247)
Q Consensus 164 ~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPAr~lg~~~~~~~~~~~wvy~~~p~~Ga~~a~~~~~~~~~~~~ 239 (247)
++...+...|+.||+.+....+.+++.||+++||||||||+++.++|+++|+||++|++|+++++++|++++.++.
T Consensus 162 ~~~~~~~~~pl~IGl~v~~~~~~~~~~TG~a~NPAR~~Gpal~~~~~~~~wv~~vgP~~Ga~la~~~y~~~~~~~~ 237 (271)
T 1j4n_A 162 RRRDLGGSGPLAIGFSVALGHLLAIDYTGCGINPARSFGSSVITHNFQDHWIFWVGPFIGAALAVLIYDFILAPRS 237 (271)
T ss_dssp SCCCCCSCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHTTCCTTTTHHHHHHHHHHHHHHHHHHTTTSCCS
T ss_pred cCCCccccHHHHHHHHHHHHHHhccCCCccccChHHHHHHHHHhCCCcceeHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 4433456899999999998888888899999999999999999999999999999999999999999999987654
No 5
>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A
Probab=100.00 E-value=1.8e-52 Score=363.79 Aligned_cols=227 Identities=41% Similarity=0.703 Sum_probs=194.0
Q ss_pred cCCcCChhHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCchHHHHHHHHHHHHHHHHHHhcCCCcccchHHHH
Q 025865 8 FDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKVTADAALDPSGLVAIAICHGFALFVAVAVGANISGGHVNPAVTF 87 (247)
Q Consensus 8 ~~~~~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSG~h~NPavTl 87 (247)
.++..+++++|++++||+|||+|+|+++++++.... .......+++.+++++|+++++.+++++++||||+|||||+
T Consensus 4 ~~~~~~~~~~r~~lAEflGT~lLv~~g~Gs~~~~~~---~~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTl 80 (301)
T 2zz9_A 4 FKGVWTQAFWKAVTAEFLAMLIFVLLSVGSTINWGG---SENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTV 80 (301)
T ss_dssp ----CCHHHHHHHHHHHHHHHHHHHHHHTTSCCTTC---C-CCCCCCHHHHHHHHHHHHHHHHHHHGGGTCCCCSHHHHH
T ss_pred ccccccHHHHHHHHHHHHHHHHHHHHHHHHHhcccc---CCCCCCcchHHHHHHHHHHHHHhhheeccCCcceeChHHHH
Confidence 457778999999999999999999999998764331 11223457888999999999999999999999999999999
Q ss_pred HHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCC---CceeccCCCCchhHHHHHHHHHHHHHHHHHHHhccCCC
Q 025865 88 GLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLA---VPTHNVAAGVGAIEGVVMEIIITFGLVYTVYATAADPK 164 (247)
Q Consensus 88 ~~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~E~~~T~~l~~~i~~~~~~~~ 164 (247)
++++.|+++|++++.|+++|++|+++|+.+++.++++.. ...+.+.++.+..++++.|+++||+|+++++.+. |++
T Consensus 81 a~~~~g~~~~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~~~~~~~g~~~~~~~~s~~~~f~~E~i~Tf~Lv~~Il~~~-d~~ 159 (301)
T 2zz9_A 81 AMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASC-DDK 159 (301)
T ss_dssp HHHHTSSSCTTTTHHHHHHHHHHHHHHHHHHHTTSCSCGGGTSSCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHS-CSS
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCceeeecCCcccchHHHHHHHHHHHHHHHHHHHHhc-CCC
Confidence 999999999999999999999999999999999886432 2334455677889999999999999999999984 444
Q ss_pred CCCCCChhHHHHHHHHHHHHHhhcCCCCCCcChhhhHHHHhccCCCCceeeeeccccHHHHHHHHHHHHHhcCC
Q 025865 165 KGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWVGPLIGGGLAGLIYGNVFMHS 238 (247)
Q Consensus 165 ~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPAr~lg~~~~~~~~~~~wvy~~~p~~Ga~~a~~~~~~~~~~~ 238 (247)
+.......|+.||+.+....+.+++.||+++|||||||||++.++|.++|+||++|++|+++|+++|++++.+.
T Consensus 160 ~~~~~~~~pl~IGl~v~i~~~~g~~~TG~a~NPAR~~GPal~~~~w~~~WVy~vgPiiGailaa~ly~~l~~~~ 233 (301)
T 2zz9_A 160 RTDVTGSVALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGALYEYVFCPD 233 (301)
T ss_dssp SSCCSSCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCTTTTHHHHHHHHHHHHHHHHHHTTTC--
T ss_pred CCCccchHhHHHHHHHHHHHHHhcCCcccccCcHHHHHHHHHhCCCcceeeeeeHHHHHHHHHHHHHHHHhCCc
Confidence 33345689999999998888888889999999999999999999999999999999999999999999998654
No 6
>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A*
Probab=100.00 E-value=9.3e-52 Score=354.81 Aligned_cols=223 Identities=35% Similarity=0.646 Sum_probs=196.0
Q ss_pred CCcCChhHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCchHHHHHHHHHHHHHHHHHHhcCCCcccchHHHHH
Q 025865 9 DDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKVTADAALDPSGLVAIAICHGFALFVAVAVGANISGGHVNPAVTFG 88 (247)
Q Consensus 9 ~~~~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSG~h~NPavTl~ 88 (247)
+|.++++++|++++||+|||+|+++++++.... + ....+++.+++++|+++++.+++++++||+|+|||||++
T Consensus 2 ~e~~~~~~~~~~laEfiGT~~Lv~~g~g~~~~~----~---~~~~~~l~i~l~~Gl~v~~~i~~~g~iSGahlNPAVTla 74 (263)
T 2b6o_A 2 WELRSASFWRAIFAEFFATLFYVFFGLGASLRW----A---PGPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFA 74 (263)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHHHHHHSCC----C---SSSCHHHHHHHHHHHHHHHHHHHGGGTTCCCCSHHHHHH
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHHHHhcC----C---CCCcchHHHHHHHHHHHHHHHHHhhccCcCeeChHHHHH
Confidence 466778899999999999999999999987432 1 123467889999999999999999999999999999999
Q ss_pred HHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCC---CCceeccCCCCchhHHHHHHHHHHHHHHHHHHHhccCCCC
Q 025865 89 LALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGL---AVPTHNVAAGVGAIEGVVMEIIITFGLVYTVYATAADPKK 165 (247)
Q Consensus 89 ~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~E~~~T~~l~~~i~~~~~~~~~ 165 (247)
+++.|+++|++.+.|+++|++|+++|+.+++.++++. ..+.+.+.++.+..++++.|+++||+|+++++.+ .|+++
T Consensus 75 ~~~~g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~i~Tf~Lv~~il~~-~d~~~ 153 (263)
T 2b6o_A 75 FLVGSQMSLLRAICYVVAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHPGVSVGQATIVEIFLTLQFVLCIFAT-YDERR 153 (263)
T ss_dssp HHHTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHSCTTTCSSCSCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-SCTTS
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccCCccccHHHHHHHHHHHHHHHHHHHHHH-hcccC
Confidence 9999999999999999999999999999999998743 2344556677888999999999999999999998 55554
Q ss_pred CCCCChhHHHHHHHHHHHHHhhcCCCCCCcChhhhHHHHhccCCCCceeeeeccccHHHHHHHHHHHHHhcCCC
Q 025865 166 GSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWVGPLIGGGLAGLIYGNVFMHSE 239 (247)
Q Consensus 166 ~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPAr~lg~~~~~~~~~~~wvy~~~p~~Ga~~a~~~~~~~~~~~~ 239 (247)
.......|+.||+.+....+.++++||+++||||||||+++.++|+++|+||++|++|+++++++|++++.++.
T Consensus 154 ~~~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~~~~Wvy~vgP~~Ga~la~~~y~~l~~~~~ 227 (263)
T 2b6o_A 154 NGRLGSVALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRNFTNHWVYWVGPVIGAGLGSLLYDFLLFPRL 227 (263)
T ss_dssp CSSCCCHHHHHHHHHHHHHHHHTTTSTTCCCHHHHHHHHHHHTCCTTCTHHHHHHHHHHHHHHHHHHTTTSCCS
T ss_pred CCCcccHHHHHHHHHHHHHHhccCCCcccccHHHHHHHHHHcCCccceeHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 34456899999999999999999999999999999999999999999999999999999999999999987654
No 7
>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens}
Probab=100.00 E-value=3e-52 Score=357.98 Aligned_cols=224 Identities=35% Similarity=0.610 Sum_probs=197.0
Q ss_pred CCcCChhHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCchHHHHHHHHHHHHHHHHHHhcCCCcccchHHHHH
Q 025865 9 DDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKVTADAALDPSGLVAIAICHGFALFVAVAVGANISGGHVNPAVTFG 88 (247)
Q Consensus 9 ~~~~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSG~h~NPavTl~ 88 (247)
+|.++++++|++++||+||++|+|++++++... . ....+++.+++++|+++++.+++++++||||+|||||++
T Consensus 4 ~e~~~~~~~r~~laEfiGT~~lv~~g~g~~~~~---~----~~~~~~l~ial~~Glav~~~i~~~g~iSGaHlNPAVTla 76 (266)
T 3d9s_A 4 KEVCSVAFLKAVFAEFLATLIFVFFGLGSALKW---P----SALPTILQIALAFGLAIGTLAQALGPVSGGHINPAITLA 76 (266)
T ss_dssp HHHTSHHHHHHHHHHHHHHHHHHHHHHHHHSCC---S----SSCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
T ss_pred hhhhChHHHHHHHHHHHHHHHHHHHHHHHHhCC---C----CCCccHHHHHHHHHHHHHHHHHHHcccCcceECHHHHHH
Confidence 466788999999999999999999999987421 1 123468889999999999999999999999999999999
Q ss_pred HHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCC---CCceeccCCCCchhHHHHHHHHHHHHHHHHHHHhccCCCC
Q 025865 89 LALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGL---AVPTHNVAAGVGAIEGVVMEIIITFGLVYTVYATAADPKK 165 (247)
Q Consensus 89 ~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~E~~~T~~l~~~i~~~~~~~~~ 165 (247)
+++.|+++|++++.|+++|++|+++|+.+++.+++++ ..+.+.+.++.+..++++.|+++||+|+++++.+. |+++
T Consensus 77 ~~~~g~~~~~~~~~Yi~AQ~lGA~~ga~l~~~~~~~~~~~~~g~~~~~~~~s~~~~~~~E~i~Tf~Lv~~il~~~-d~~~ 155 (266)
T 3d9s_A 77 LLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNARGNLAVNALNNNTTQGQAMVVELILTFQLALCIFAST-DSRR 155 (266)
T ss_dssp HHHTSSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHTTTTCCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHH-CTTC
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHccccccCceeeccCCccccHHHHHHHHHHHHHHHHHHHHHHh-cccC
Confidence 9999999999999999999999999999999988632 23334455677889999999999999999999984 5554
Q ss_pred CCCCChhHHHHHHHHHHHHHhhcCCCCCCcChhhhHHHHhccCCCCc-eeeeeccccHHHHHHHHHHHHHhcCCCC
Q 025865 166 GSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGNFQD-NWIYWVGPLIGGGLAGLIYGNVFMHSEH 240 (247)
Q Consensus 166 ~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPAr~lg~~~~~~~~~~-~wvy~~~p~~Ga~~a~~~~~~~~~~~~~ 240 (247)
.......|+.||+.+....+.++++||+++||||||||+++.++|++ +|+||++|++|+++|+++|++++.++.+
T Consensus 156 ~~~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~~~~~Wvy~vgP~~Ga~la~~~y~~l~~~~~~ 231 (266)
T 3d9s_A 156 TSPVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILYFYLLFPNSL 231 (266)
T ss_dssp CSCCCCHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHTCCCTTHHHHHHHHHHHHHHHHHHHHHTTSCCSC
T ss_pred CCccchHHHHHHHHHHHHHHHhhccccccccHHHHHHHHHHcCCcccCEeeeehHHHHHHHHHHHHHHHHhCCCch
Confidence 44456899999999999999999999999999999999999999998 9999999999999999999999876544
No 8
>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A
Probab=100.00 E-value=3.7e-52 Score=362.55 Aligned_cols=227 Identities=41% Similarity=0.637 Sum_probs=193.2
Q ss_pred CCcCChhHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCchHHHHHHHHHHHHHHHHHHhcCCCcccchHHHHH
Q 025865 9 DDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKVTADAALDPSGLVAIAICHGFALFVAVAVGANISGGHVNPAVTFG 88 (247)
Q Consensus 9 ~~~~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSG~h~NPavTl~ 88 (247)
+|..+++++|++++||+|||+|+|++++++........ .....+++.+++++|+++++.+|+++++||||+|||||++
T Consensus 53 ~e~~~~~~~r~~lAEfiGT~lLv~~g~gsv~~~~~~~~--~~~~~g~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla 130 (304)
T 3cn5_A 53 GELKLWSFWRAAIAEFIATLLFLYITVATVIGHSKETV--VCGSVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFG 130 (304)
T ss_dssp --CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCS--TTCSCHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHH
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHHhHHHeEeccccC--CCCCCCceeehhhhhhhhheeeeEeeccCCCccCcHHHHH
Confidence 55567788999999999999999999998865432221 1234578899999999999999999999999999999999
Q ss_pred HHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCC----CCceeccCCCCchhHHHHHHHHHHHHHHHHHHHhccCCC
Q 025865 89 LALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGL----AVPTHNVAAGVGAIEGVVMEIIITFGLVYTVYATAADPK 164 (247)
Q Consensus 89 ~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~E~~~T~~l~~~i~~~~~~~~ 164 (247)
+++.|+++|++++.|+++|++|+++|+.+++.++++. ..+...+.++.+..++++.|+++||+|+++++.. .|++
T Consensus 131 ~~l~g~~~~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~~~~~~~~g~~~~~~~~s~~~~f~~E~i~TfiLv~~Il~~-~d~~ 209 (304)
T 3cn5_A 131 LFLARKVELLRALVYMIAQCLGAICGVGLVKAFMKGPYNQFGGGANSVALGYNKGTALGAEIIGTFVLVYTVFSA-TDPK 209 (304)
T ss_dssp HHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHTTTTCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHT-EEEE
T ss_pred HHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcccccCCCccHHHHHHHHHHHHHHHHHHHhhe-ecCc
Confidence 9999999999999999999999999999999887531 1122334566788999999999999999999976 4443
Q ss_pred CCCCCC----hhHHHHHHHHHHHHHhhcCCCCCCcChhhhHHHHhc---cCCCCceeeeeccccHHHHHHHHHHHHHhcC
Q 025865 165 KGSLGT----IAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVA---SGNFQDNWIYWVGPLIGGGLAGLIYGNVFMH 237 (247)
Q Consensus 165 ~~~~~~----~~~~~ig~~v~~~~~~~~~~sG~~lNPAr~lg~~~~---~~~~~~~wvy~~~p~~Ga~~a~~~~~~~~~~ 237 (247)
+...+. +.|+.||+++++..++++++||+++|||||||||++ .++|+++|+||++|++|+++|+++|++++.+
T Consensus 210 ~~~~~~~~~~lapl~IGl~V~~~~l~~g~~TG~amNPAR~~GPal~~~~~~~w~~~WvywvgPiiGa~laa~~y~~l~~~ 289 (304)
T 3cn5_A 210 RSARDSHVPILAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIFNSNKVWDDQWIFWVGPFIGAAVAAAYHQYVLRA 289 (304)
T ss_dssp EESTTSCCEEECHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHCCHHHHHHTTHHHHHHHHHHHHHHHHHHTTSCC
T ss_pred cCCCCcccccchHHHHHHHHHHHHHhccCCCccccChHHHHHHHHHHccCCCcCceEEEeehHHHHHHHHHHHHHHHhCC
Confidence 322222 789999999999999999999999999999999998 5689999999999999999999999999776
Q ss_pred C
Q 025865 238 S 238 (247)
Q Consensus 238 ~ 238 (247)
.
T Consensus 290 ~ 290 (304)
T 3cn5_A 290 A 290 (304)
T ss_dssp C
T ss_pred C
Confidence 4
No 9
>1ldf_A Glycerol uptake facilitator protein; glycerol-conducting membrane channel protein, transport PROT; HET: BOG; 2.10A {Escherichia coli} SCOP: f.19.1.1 PDB: 1fx8_A* 1lda_A* 1ldi_A*
Probab=100.00 E-value=1.8e-50 Score=350.32 Aligned_cols=223 Identities=27% Similarity=0.407 Sum_probs=184.3
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCchHHHHHHHHHHHHHHHHHHhcCCCcccchHHHHHHHH
Q 025865 12 FSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKVTADAALDPSGLVAIAICHGFALFVAVAVGANISGGHVNPAVTFGLAL 91 (247)
Q Consensus 12 ~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSG~h~NPavTl~~~l 91 (247)
++++++|++++||+|||+|+|++++++..... .+ ...+...+++++|+++++.+++++++||||+|||||+++++
T Consensus 3 ~~~~~~~~~laEflGT~~Lv~~G~g~~~~~~l-~~----~~~g~~~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~ 77 (281)
T 1ldf_A 3 QTSTLKGQCIAEFLGTGLLIFFGVGCVAALKV-AG----ASFGQWEISVIFGLGVAMAIYLTAGVSGAHLNPAVTIALWL 77 (281)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHHHHHHHH-SC----CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cC----CCCchHHHHHHHHHHHHHHhheecccCcCeeChHHHHHHHH
Confidence 45678999999999999999999988754332 11 11234458999999999999999999999999999999999
Q ss_pred hCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCC-------------------Cceec--cCCCCchhHHHHHHHHHHH
Q 025865 92 GGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLA-------------------VPTHN--VAAGVGAIEGVVMEIIITF 150 (247)
Q Consensus 92 ~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~-------------------~~~~~--~~~~~~~~~~~~~E~~~T~ 150 (247)
.|+++|++++.|+++|++|+++|+.+++.++++.. .+.+. +.++.+..++++.|+++||
T Consensus 78 ~g~~~~~~~~~Yi~AQ~lGA~~ga~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~f~t~p~~~~s~~~~~~~E~i~Tf 157 (281)
T 1ldf_A 78 FACFDKRKVIPFIVSQVAGAFCAAALVYGLYYNLFFDFEQTHHIVRGSVESVDLAGTFSTYPNPHINFVQAFAVEMVITA 157 (281)
T ss_dssp HSCCCTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTSGGGHHHHTTTSCCCCTTCCHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccccccccccccccccceeeccCCccccHHHHHHHHHHHHH
Confidence 99999999999999999999999999998874210 01122 3445788999999999999
Q ss_pred HHHHHHHHhccCCCCCC-CCChhHHHHHHHHHHHHHhhcCCCCCCcChhhhHHHHhccC-------CC------Cceeee
Q 025865 151 GLVYTVYATAADPKKGS-LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASG-------NF------QDNWIY 216 (247)
Q Consensus 151 ~l~~~i~~~~~~~~~~~-~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPAr~lg~~~~~~-------~~------~~~wvy 216 (247)
+|+++++.+. |+++.. .+.+.|+.||+.+....+..++.||+++|||||||||++.. .| .++|||
T Consensus 158 ~Lv~~il~~~-d~~~~~~~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~g~g~~~~~~~~~~~~~WVy 236 (281)
T 1ldf_A 158 ILMGLILALT-DDGNGVPRGPLAPLLIGLLIAVIGASMGPLTGTAMNPARDFGPKVFAWLAGWGNVAFTGGRDIPYFLVP 236 (281)
T ss_dssp HHHHHHHHHH-CTTSSSCCGGGHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHTTTTTHHHHTTCSSCTTHHH
T ss_pred HHHHHHHHHh-ccCCCCcccchHHHHHHHHHHHHHHhcccccccccCcHhhHHHHHHHHhcccccccccccCCCceeeHH
Confidence 9999999985 444322 34689999999999999999999999999999999999751 12 279999
Q ss_pred eccccHHHHHHHHHHHHHhcCCCC
Q 025865 217 WVGPLIGGGLAGLIYGNVFMHSEH 240 (247)
Q Consensus 217 ~~~p~~Ga~~a~~~~~~~~~~~~~ 240 (247)
|++|++|+++++++|++++.++.+
T Consensus 237 ~vgPi~Ga~la~~~y~~l~~~~~~ 260 (281)
T 1ldf_A 237 LFGPIVGAIVGAFAYRKLIGRHLP 260 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHTGGGC-
T ss_pred hHHHHHHHHHHHHHHHHHhCccCC
Confidence 999999999999999999876543
No 10
>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A*
Probab=100.00 E-value=2.2e-50 Score=341.20 Aligned_cols=216 Identities=32% Similarity=0.534 Sum_probs=185.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCchHHHHHHHHHHHHHHHHHHhcCCCcccchHHHHHHHHhCC
Q 025865 15 GSFKAYLAEFISTLLFVFAGVGSAIAFNKVTADAALDPSGLVAIAICHGFALFVAVAVGANISGGHVNPAVTFGLALGGQ 94 (247)
Q Consensus 15 ~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSG~h~NPavTl~~~l~g~ 94 (247)
+++|++++||+||++|+|++++++...... +....+++.+++++|+++++.+++++++||+|+|||||+++++.|+
T Consensus 3 ~l~r~~~aEf~GT~~lv~~g~g~~~~~~~~----~~~~~~~l~ia~~~Gl~v~~~i~~~g~iSGaHlNPAVTla~~~~g~ 78 (234)
T 2o9g_A 3 HMFRKLAAESFGTFWLVFGGSGSAVLAAGF----PELGIGFAGVALAFGLTVLTMAFAVGHISGGHFNPAVTIGLWAGGR 78 (234)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHTTTC----TTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcccCC----CCCCcChHHHHHHHHHHHHHHHHHhhccCcceeCHHHHHHHHHhCC
Confidence 468999999999999999999987433211 1123468889999999999999999999999999999999999999
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHHHHHhcCCC-----------Cceecc-CCCCchhHHHHHHHHHHHHHHHHHHHhccC
Q 025865 95 ITILTGIFYWIAQLLGSIVASFLLKVVTGGLA-----------VPTHNV-AAGVGAIEGVVMEIIITFGLVYTVYATAAD 162 (247)
Q Consensus 95 ~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~-----------~~~~~~-~~~~~~~~~~~~E~~~T~~l~~~i~~~~~~ 162 (247)
++|++++.|+++|++|+++|+.+++.++++.. ...... +.+.+..++++.|+++|++|+++++.+ .|
T Consensus 79 ~~~~~~~~Yi~aQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~t~p~~~~~~~~~~~E~i~T~~Lv~~i~~~-~d 157 (234)
T 2o9g_A 79 FPAKEVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGYGEHSPGGYSMLSALVVELVLSAGFLLVIHGA-TD 157 (234)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCCHHHHCTTCCCCGGGSTTCCCHHHHHHHHHHHHHHHHHHHHHH-TS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccccceeeecCCCccchHHHHHHHHHHHHHHHHHHHHh-cC
Confidence 99999999999999999999999999886421 011111 225678899999999999999999997 45
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHhhcCCCCCCcChhhhHHHHhccCC--CCceeeeeccccHHHHHHHHHHHHHhcC
Q 025865 163 PKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGN--FQDNWIYWVGPLIGGGLAGLIYGNVFMH 237 (247)
Q Consensus 163 ~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPAr~lg~~~~~~~--~~~~wvy~~~p~~Ga~~a~~~~~~~~~~ 237 (247)
+++ .+...|+.||+.+....+..++.||+++|||||||||++.++ |+++|+||++|++|+++++++|++++.+
T Consensus 158 ~~~--~~~~~pl~IGl~v~~~~~~~g~~TG~s~NPAR~lGPal~~g~~~~~~~Wv~~vgP~~Ga~la~~~y~~~~~~ 232 (234)
T 2o9g_A 158 KFA--PAGFAPIAIGLACTLIHLISIPVTNTSVNPARSTAVAIFQGGWALEQLWFFWVVPIVGGIIGGLIYRTLLEK 232 (234)
T ss_dssp TTS--CTTCHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHCSHHHHSHHHHHHHHHHHHHHHHHHHHHHTSC
T ss_pred CCC--ccchHHHHHHHHHHHHHHHccCCCccccChHHHHHHHHHhCCCCCceeeeeehHHhHHHHHHHHHHHHHcCC
Confidence 543 345899999999999999999999999999999999999875 4599999999999999999999999754
No 11
>3llq_A Aquaporin Z 2; aquaporin tetramer, membrane protein, water channel, structu genomics, PSI-2, protein structure initiative; 2.01A {Agrobacterium tumefaciens str}
Probab=100.00 E-value=2e-50 Score=343.84 Aligned_cols=217 Identities=31% Similarity=0.499 Sum_probs=183.9
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCchHHHHHHHHHHHHHHHHHHhcCCCcccchHHHHHHHH
Q 025865 12 FSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKVTADAALDPSGLVAIAICHGFALFVAVAVGANISGGHVNPAVTFGLAL 91 (247)
Q Consensus 12 ~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSG~h~NPavTl~~~l 91 (247)
.+++++|++++||+||++|++++++++....... ....+++.+++++|+++++.+++++++||||+|||||+++++
T Consensus 25 ~~~~l~r~~laEflGT~lLv~~G~G~~~~~~~~~----~~~~~~l~iala~Glav~~~i~~~g~iSGaHlNPAVTla~~~ 100 (256)
T 3llq_A 25 QSYVMGRKLLAEFFGTFWLVFGGCGSAVFAAAFP----ELGIGFTGVALAFGLTVLTMAYAVGGISGGHFNPAVSVGLTV 100 (256)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHHHHHTTCT----TTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC----CCCccHHHHHHHHHHHHHHHHheeeccccceEchHHHHHHHH
Confidence 3567899999999999999999999875433221 134578899999999999999999999999999999999999
Q ss_pred hCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCC---------CceeccC-CCCchhHHHHHHHHHHHHHHHHHHHhcc
Q 025865 92 GGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLA---------VPTHNVA-AGVGAIEGVVMEIIITFGLVYTVYATAA 161 (247)
Q Consensus 92 ~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~---------~~~~~~~-~~~~~~~~~~~E~~~T~~l~~~i~~~~~ 161 (247)
.|+++|++++.|+++|++|+++|+.+++.++++.. ....... ...+..++++.|+++|++|+++++.+ .
T Consensus 101 ~g~~~~~~~~~YiiAQ~lGA~~ga~lv~~~~~~~~~~~~~~~~~~~~~~t~p~~~s~~~~f~~E~i~Tf~Lv~~il~~-~ 179 (256)
T 3llq_A 101 AGRFPASSLVPYVIAQVAGAIVAAAALYVIATGKAGIDLGGFASNGYGEHSPGGYSLVSALLIEIILTAFFLIVILGS-T 179 (256)
T ss_dssp TTSSCGGGHHHHHHHHHHHHHHHHHHHHHHHTTBTTCCCTTTTCCCCGGGSTTCCCHHHHHHHHHHHHHHHHHHHHHH-H
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccccccccccccccccCCcccCHHHHHHHHHHHHHHHHHHHHHh-c
Confidence 99999999999999999999999999999875321 0111222 24678899999999999999999987 4
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHhhcCCCCCCcChhhhHHHHhccCC--CCceeeeeccccHHHHHHHHHHHHHh
Q 025865 162 DPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGN--FQDNWIYWVGPLIGGGLAGLIYGNVF 235 (247)
Q Consensus 162 ~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPAr~lg~~~~~~~--~~~~wvy~~~p~~Ga~~a~~~~~~~~ 235 (247)
|+++ .+.+.|+.||+.+....+..++.||+++|||||||||++.++ |+++|+||++|++|+++|+++|+++.
T Consensus 180 d~~~--~~~~~pl~IGl~v~~i~~~~g~~TG~a~NPAR~lGPal~~g~~~~~~~WVy~vgPi~Ga~la~~~y~~l~ 253 (256)
T 3llq_A 180 HGRV--PAGFAPIAIGLALTLIHLISIPVTNTSVNPARSTGQALFVGGWALQQLWLFWLAPIVGGAAGAVIWKLFG 253 (256)
T ss_dssp STTS--CTTCHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHCHHHHHHTTHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCC--CccchhHHHHHHHHHHHHHhccccccccChHHHHHHHHHcCCCcccceeeeeeHHHHHHHHHHHHHHHhc
Confidence 5553 345899999999999999999999999999999999998764 56899999999999999999999984
No 12
>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A*
Probab=100.00 E-value=4.9e-50 Score=341.70 Aligned_cols=220 Identities=34% Similarity=0.459 Sum_probs=187.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCC-------C-----CCCchHHHHHHHHHHHHHHHHHHhcCCCcccc
Q 025865 15 GSFKAYLAEFISTLLFVFAGVGSAIAFNKVTADAA-------L-----DPSGLVAIAICHGFALFVAVAVGANISGGHVN 82 (247)
Q Consensus 15 ~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~-------~-----~~~~~~~~~l~~g~~~~~~i~~~~~iSG~h~N 82 (247)
+++|++++||+||++|+|++++++.......++.. . ...+++.+++++|+++++.+++++++||+|+|
T Consensus 3 ~~~~~~~aEfiGT~~lv~~g~g~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~ia~~~Gl~v~~~v~~~g~iSGaH~N 82 (246)
T 2f2b_A 3 SLTKRCIAEFIGTFILVFFGAGSAAVTLMIASGGTSPNPFNIGIGLLGGLGDWVAIGLAFGFAIAASIYALGNISGCHIN 82 (246)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSSTTCCSTTTTTTHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCS
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCccccccccccccccccccchhHHHHHHHHHHHHHhheecccccceeC
Confidence 57899999999999999999998865442221100 0 22356779999999999999999999999999
Q ss_pred hHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCC---CCc--eeccCCCCchhHHHHHHHHHHHHHHHHHH
Q 025865 83 PAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGL---AVP--THNVAAGVGAIEGVVMEIIITFGLVYTVY 157 (247)
Q Consensus 83 PavTl~~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~---~~~--~~~~~~~~~~~~~~~~E~~~T~~l~~~i~ 157 (247)
||||+++++.|+++|+|.+.|+++|++|+++|+.+++.+++++ ... ...+.++.+..++++.|+++|++|+++++
T Consensus 83 PAVTla~~~~g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~~~~~t~p~~~~~~~~~~~~E~i~Tf~Lv~~i~ 162 (246)
T 2f2b_A 83 PAVTIGLWSVKKFPGREVVPYIIAQLLGAAFGSFIFLQCAGIGAATVGGLGATAPFPGISYWQAMLAEVVGTFLLMITIM 162 (246)
T ss_dssp HHHHHHHHHTTSSCGGGHHHHHHHHHHHHHHHHHHHHHHHCTHHHHTTGGGCCCCCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhcceeeeccCccccchHHHHHHHHHHHHHHHheee
Confidence 9999999999999999999999999999999999999998752 122 22333567889999999999999999999
Q ss_pred HhccCCCCCCCCChhHHHHHHHHHHHHHhhcCCCCCCcChhhhHHHHh--cc----CCCCceeeeeccccHHHHHHHHHH
Q 025865 158 ATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAV--AS----GNFQDNWIYWVGPLIGGGLAGLIY 231 (247)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPAr~lg~~~--~~----~~~~~~wvy~~~p~~Ga~~a~~~~ 231 (247)
.+..|+++. ....|+.+|+.+...+++.++.||+++||||||||++ .. .+|+++|+||++|++|+++++++|
T Consensus 163 ~~~~~~~~~--~~~~pl~iGl~v~~~~~~~g~~TG~~iNPAr~lgp~l~~~~~g~~~~w~~~~vy~vap~~Ga~laa~~y 240 (246)
T 2f2b_A 163 GIAVDERAP--KGFAGIIIGLTVAGIITTLGNISGSSLNPARTFGPYLNDMIFAGTDLWNYYSIYVIGPIVGAVLAALTY 240 (246)
T ss_dssp HHTTSTTSC--TTCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCGGGTTHHHHHHHHHHHHHHHHH
T ss_pred EEecCCCCC--CceeeHHHHHHHHHHHhcccccCCCccCHHHHHHHHHHHHHcCCCCCcceEEEeeeHHHHHHHHHHHHH
Confidence 976665532 4579999999999999999999999999999999999 22 368889999999999999999999
Q ss_pred HHHhc
Q 025865 232 GNVFM 236 (247)
Q Consensus 232 ~~~~~ 236 (247)
++++.
T Consensus 241 ~~l~~ 245 (246)
T 2f2b_A 241 QYLTS 245 (246)
T ss_dssp HHHTC
T ss_pred HHHcC
Confidence 99864
No 13
>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum}
Probab=100.00 E-value=8.4e-51 Score=348.37 Aligned_cols=224 Identities=23% Similarity=0.380 Sum_probs=185.5
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCchHHHHHHHHHHHHHHHHHHhcCCCcccchHHHHHHHHh
Q 025865 13 SLGSFKAYLAEFISTLLFVFAGVGSAIAFNKVTADAALDPSGLVAIAICHGFALFVAVAVGANISGGHVNPAVTFGLALG 92 (247)
Q Consensus 13 ~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSG~h~NPavTl~~~l~ 92 (247)
.++++|++++||+||++|+|+++++...... . + ...+++.+++++|+++++.+++++++||||+|||||+++++.
T Consensus 6 ~~~~~~~~~aEflGT~~lv~~G~g~~~~~~~-~-~---~~~~~l~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~ 80 (258)
T 3c02_A 6 YKSYVREFIGEFLGTFVLMFLGEGATANFHT-T-G---LSGDWYKLCLGWGLAVFFGILVSAKLSGAHLNLAVSIGLSSI 80 (258)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHHHH-S-S---STTCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-C-C---CCccHHHHHHHHHHHHHHHHheecccCcCeeChHHHHHHHHh
Confidence 4678999999999999999999998764331 1 1 134688899999999999999999999999999999999999
Q ss_pred CCCCcchhHHHHHHHHHHHHHHHHHHHHHhcCC----CCc----eeccCCCCchhHHHHHHHHHHHHHHHHHHHhccCCC
Q 025865 93 GQITILTGIFYWIAQLLGSIVASFLLKVVTGGL----AVP----THNVAAGVGAIEGVVMEIIITFGLVYTVYATAADPK 164 (247)
Q Consensus 93 g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~----~~~----~~~~~~~~~~~~~~~~E~~~T~~l~~~i~~~~~~~~ 164 (247)
|+++|++++.|+++|++|+++|+.+++.++++. ..+ ........+..++++.|+++|++|+++++.+. |++
T Consensus 81 g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~t~p~~~~~~~E~i~Tf~Lv~~i~~~~-d~~ 159 (258)
T 3c02_A 81 NKFDLKKIPVYFFAQLLGAFVGTSTVYGLYHGFISNSKIPQFAWETSRNPSISLTGAFFNELILTGILLLVILVVV-DEN 159 (258)
T ss_dssp TSSCGGGHHHHHHHHHHHHHHHHHHHHHHTHHHHHTTCSCTTCSSCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHH-CHH
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHHcchhhhhccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHHHh-Ccc
Confidence 999999999999999999999999999887521 100 11111233455699999999999999999984 444
Q ss_pred CC-CCCChh-HHHHHHHHHHHHHhhcCCCCCCcChhhhHHHHhccC------CC----CceeeeeccccHHHHHHHHHHH
Q 025865 165 KG-SLGTIA-PIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASG------NF----QDNWIYWVGPLIGGGLAGLIYG 232 (247)
Q Consensus 165 ~~-~~~~~~-~~~ig~~v~~~~~~~~~~sG~~lNPAr~lg~~~~~~------~~----~~~wvy~~~p~~Ga~~a~~~~~ 232 (247)
+. ..+.+. |+.||+.+....++.++.||+++|||||||||++.. +| +++|+||++|++|+++++++|+
T Consensus 160 ~~~~~~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~~g~~~~~~~~~y~Wv~~vgP~~Ga~la~~~y~ 239 (258)
T 3c02_A 160 ICGKFHILKLSSVVGLIILCIGITFGGNTGFALNPSRDLGSRFLSLIAYGKDTFTKDNFYFWVPLVAPCVGSVVFCQFYD 239 (258)
T ss_dssp HHCSCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCTHHHHHHHHTTHHHHHHHHHHHHHHHHHHH
T ss_pred cCCcccccHHHHHHHHHHHHHHHhccCccCCCcChHHHHHHHHHHhccccccccccCCceeehHHHHHHHHHHHHHHHHH
Confidence 32 234577 999999999999999999999999999999999862 34 6699999999999999999999
Q ss_pred HHhcCCCCCC
Q 025865 233 NVFMHSEHAP 242 (247)
Q Consensus 233 ~~~~~~~~~~ 242 (247)
+++.++.+++
T Consensus 240 ~~~~~~~~~~ 249 (258)
T 3c02_A 240 KVICPLVDLA 249 (258)
T ss_dssp HTHHHHHHHC
T ss_pred HHhcccCCCc
Confidence 9987765443
No 14
>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A*
Probab=99.67 E-value=3.4e-16 Score=132.90 Aligned_cols=102 Identities=26% Similarity=0.346 Sum_probs=85.3
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCchHHHHHHHHHHHHHHHHHHhcCCCcccchHHHHHHHH
Q 025865 12 FSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKVTADAALDPSGLVAIAICHGFALFVAVAVGANISGGHVNPAVTFGLAL 91 (247)
Q Consensus 12 ~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSG~h~NPavTl~~~l 91 (247)
...+.++.++.|+++||+|++.+++.....+.. . ...++.+|+.+...++..+++||+|+|||+|+++.+
T Consensus 139 ~~~~~~~~~~~E~i~Tf~Lv~~i~~~~~~~~~~--------~--~~~pl~iGl~v~~~~~~~g~~TG~~iNPAr~lgp~l 208 (246)
T 2f2b_A 139 PGISYWQAMLAEVVGTFLLMITIMGIAVDERAP--------K--GFAGIIIGLTVAGIITTLGNISGSSLNPARTFGPYL 208 (246)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHHHHHHTTSTTSC--------T--TCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
T ss_pred cccchHHHHHHHHHHHHHHHheeeEEecCCCCC--------C--ceeeHHHHHHHHHHHhcccccCCCccCHHHHHHHHH
Confidence 355678999999999999999988764321110 1 135789999999999999999999999999999888
Q ss_pred -----hCCCCcchhHHHHHHHHHHHHHHHHHHHHHhc
Q 025865 92 -----GGQITILTGIFYWIAQLLGSIVASFLLKVVTG 123 (247)
Q Consensus 92 -----~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~ 123 (247)
.++..|.+.|+||++|++|+++|+.+++.+..
T Consensus 209 ~~~~~g~~~~w~~~~vy~vap~~Ga~laa~~y~~l~~ 245 (246)
T 2f2b_A 209 NDMIFAGTDLWNYYSIYVIGPIVGAVLAALTYQYLTS 245 (246)
T ss_dssp HHHHHHCCCCGGGTTHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHcCCCCCcceEEEeeeHHHHHHHHHHHHHHHHcC
Confidence 45678999999999999999999999887753
No 15
>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A*
Probab=99.57 E-value=2.6e-15 Score=128.46 Aligned_cols=102 Identities=20% Similarity=0.205 Sum_probs=87.0
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhccCCCCCCCCC--hhHHHHHHHHHHHHHhhcCCCCCCcChhhhHHHHhccC-CCCce
Q 025865 137 GAIEGVVMEIIITFGLVYTVYATAADPKKGSLGT--IAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASG-NFQDN 213 (247)
Q Consensus 137 ~~~~~~~~E~~~T~~l~~~i~~~~~~~~~~~~~~--~~~~~ig~~v~~~~~~~~~~sG~~lNPAr~lg~~~~~~-~~~~~ 213 (247)
+..+.++.|+++|++|+++.+++....+. .... ..++.+|+++++.++..++.||+|+|||++++.++.++ +|.+.
T Consensus 8 ~~~~~~laEfiGT~~Lv~~g~g~~~~~~~-~~~~~l~i~l~~Gl~v~~~i~~~g~iSGahlNPAVTla~~~~g~~~~~~~ 86 (263)
T 2b6o_A 8 SFWRAIFAEFFATLFYVFFGLGASLRWAP-GPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRA 86 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCCCS-SSCHHHHHHHHHHHHHHHHHHHGGGTTCCCCSHHHHHHHHHTTCSCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCC-CCcchHHHHHHHHHHHHHHHHHhhccCcCeeChHHHHHHHHhcCCCHHHH
Confidence 56789999999999999999987543221 2222 35788999999999999999999999999999999866 78999
Q ss_pred eeeeccccHHHHHHHHHHHHHhcCCC
Q 025865 214 WIYWVGPLIGGGLAGLIYGNVFMHSE 239 (247)
Q Consensus 214 wvy~~~p~~Ga~~a~~~~~~~~~~~~ 239 (247)
|+|+++|++|+++++.+.+.++.++.
T Consensus 87 ~~Yi~AQ~lGa~~ga~l~~~~~~~~~ 112 (263)
T 2b6o_A 87 ICYVVAQLLGAVAGAAVLYSVTPPAV 112 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHccccc
Confidence 99999999999999999999987654
No 16
>3llq_A Aquaporin Z 2; aquaporin tetramer, membrane protein, water channel, structu genomics, PSI-2, protein structure initiative; 2.01A {Agrobacterium tumefaciens str}
Probab=99.50 E-value=2.6e-14 Score=121.43 Aligned_cols=100 Identities=24% Similarity=0.164 Sum_probs=82.7
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhccC-CC-CCCCCC--hhHHHHHHHHHHHHHhhcCCCCCCcChhhhHHHHhccC-CCC
Q 025865 137 GAIEGVVMEIIITFGLVYTVYATAAD-PK-KGSLGT--IAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASG-NFQ 211 (247)
Q Consensus 137 ~~~~~~~~E~~~T~~l~~~i~~~~~~-~~-~~~~~~--~~~~~ig~~v~~~~~~~~~~sG~~lNPAr~lg~~~~~~-~~~ 211 (247)
+..|.+++|+++|++|++..+++... +. +..... ...+.+|+++++.+++.+++||+++|||++++.++.++ +|+
T Consensus 28 ~l~r~~laEflGT~lLv~~G~G~~~~~~~~~~~~~~~l~iala~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~ 107 (256)
T 3llq_A 28 VMGRKLLAEFFGTFWLVFGGCGSAVFAAAFPELGIGFTGVALAFGLTVLTMAYAVGGISGGHFNPAVSVGLTVAGRFPAS 107 (256)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCccHHHHHHHHHHHHHHHHheeeccccceEchHHHHHHHHhcCCCHH
Confidence 56789999999999999988876321 11 111112 35688899999999999999999999999999999876 799
Q ss_pred ceeeeeccccHHHHHHHHHHHHHhc
Q 025865 212 DNWIYWVGPLIGGGLAGLIYGNVFM 236 (247)
Q Consensus 212 ~~wvy~~~p~~Ga~~a~~~~~~~~~ 236 (247)
+.+.|+++|++|+++|+.+.+.++.
T Consensus 108 ~~~~YiiAQ~lGA~~ga~lv~~~~~ 132 (256)
T 3llq_A 108 SLVPYVIAQVAGAIVAAAALYVIAT 132 (256)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 9999999999999999999888874
No 17
>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A
Probab=99.47 E-value=9.7e-14 Score=120.43 Aligned_cols=103 Identities=16% Similarity=0.172 Sum_probs=86.0
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHhccCCCCC---CCCC--hhHHHHHHHHHHHHHhhcCCCCCCcChhhhHHHHhccC-C
Q 025865 136 VGAIEGVVMEIIITFGLVYTVYATAADPKKG---SLGT--IAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASG-N 209 (247)
Q Consensus 136 ~~~~~~~~~E~~~T~~l~~~i~~~~~~~~~~---~~~~--~~~~~ig~~v~~~~~~~~~~sG~~lNPAr~lg~~~~~~-~ 209 (247)
.+.+|.+++|+++|++|++..+++.....+. .... ...+.+|+++++.+++.+++||+|+|||++++.++.+. .
T Consensus 10 ~~~~r~~lAEflGT~lLv~~g~Gs~~~~~~~~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~~~g~~~ 89 (301)
T 2zz9_A 10 QAFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKIS 89 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSCCTTCC-CCCCCCHHHHHHHHHHHHHHHHHHHGGGTCCCCSHHHHHHHHHTSSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHhhheeccCCcceeChHHHHHHHHhcCCC
Confidence 3578999999999999999988764322111 1112 36788899999999999999999999999999999876 7
Q ss_pred CCceeeeeccccHHHHHHHHHHHHHhcCC
Q 025865 210 FQDNWIYWVGPLIGGGLAGLIYGNVFMHS 238 (247)
Q Consensus 210 ~~~~wvy~~~p~~Ga~~a~~~~~~~~~~~ 238 (247)
|.+...|+++|++|+++|+.+.+.++.++
T Consensus 90 ~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~~ 118 (301)
T 2zz9_A 90 IAKSVFYITAQCLGAIIGAGILYLVTPPS 118 (301)
T ss_dssp TTTTHHHHHHHHHHHHHHHHHHHTTSCSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 99999999999999999999998887654
No 18
>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum}
Probab=99.44 E-value=3e-14 Score=121.61 Aligned_cols=102 Identities=19% Similarity=0.210 Sum_probs=84.0
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhccC--CCCCCCCC--hhHHHHHHHHHHHHHhhcCCCCCCcChhhhHHHHhccC-CCC
Q 025865 137 GAIEGVVMEIIITFGLVYTVYATAAD--PKKGSLGT--IAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASG-NFQ 211 (247)
Q Consensus 137 ~~~~~~~~E~~~T~~l~~~i~~~~~~--~~~~~~~~--~~~~~ig~~v~~~~~~~~~~sG~~lNPAr~lg~~~~~~-~~~ 211 (247)
+..|.++.|+++|++|++..+++... +.+. ... ...+.+|+++++.+++.+++||+|+|||++++.++.++ +|+
T Consensus 8 ~~~~~~~aEflGT~~lv~~G~g~~~~~~~~~~-~~~~l~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~ 86 (258)
T 3c02_A 8 SYVREFIGEFLGTFVLMFLGEGATANFHTTGL-SGDWYKLCLGWGLAVFFGILVSAKLSGAHLNLAVSIGLSSINKFDLK 86 (258)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSS-TTCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCC-CccHHHHHHHHHHHHHHHHheecccCcCeeChHHHHHHHHhCCCcHH
Confidence 56789999999999999987654321 1111 122 35678899999999999999999999999999999876 899
Q ss_pred ceeeeeccccHHHHHHHHHHHHHhcCCC
Q 025865 212 DNWIYWVGPLIGGGLAGLIYGNVFMHSE 239 (247)
Q Consensus 212 ~~wvy~~~p~~Ga~~a~~~~~~~~~~~~ 239 (247)
+...|+++|++|+++|+.+.+.++.++.
T Consensus 87 ~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~ 114 (258)
T 3c02_A 87 KIPVYFFAQLLGAFVGTSTVYGLYHGFI 114 (258)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHHHTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcchhh
Confidence 9999999999999999999888876543
No 19
>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A*
Probab=99.43 E-value=3.8e-13 Score=113.18 Aligned_cols=101 Identities=19% Similarity=0.365 Sum_probs=83.6
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCchHHHHHHHHHHHHHHHHHHhcCCCcccchHHHHHHHHh
Q 025865 13 SLGSFKAYLAEFISTLLFVFAGVGSAIAFNKVTADAALDPSGLVAIAICHGFALFVAVAVGANISGGHVNPAVTFGLALG 92 (247)
Q Consensus 13 ~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSG~h~NPavTl~~~l~ 92 (247)
..+.++.++.|+++||+|++..++... ++. +.+ ..++.+|+.+.......++.||+.+|||+++++.+.
T Consensus 131 ~~~~~~~~~~E~i~T~~Lv~~i~~~~d--~~~-------~~~--~~pl~IGl~v~~~~~~~g~~TG~s~NPAR~lGPal~ 199 (234)
T 2o9g_A 131 GYSMLSALVVELVLSAGFLLVIHGATD--KFA-------PAG--FAPIAIGLACTLIHLISIPVTNTSVNPARSTAVAIF 199 (234)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHTS--TTS-------CTT--CHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHhcC--CCC-------ccc--hHHHHHHHHHHHHHHHccCCCccccChHHHHHHHHH
Confidence 345789999999999999999886542 111 111 357889999999999999999999999999999886
Q ss_pred -CCCCcchhHHHHHHHHHHHHHHHHHHHHHhcC
Q 025865 93 -GQITILTGIFYWIAQLLGSIVASFLLKVVTGG 124 (247)
Q Consensus 93 -g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~ 124 (247)
|+..|.+.|+||++|++|+++|+++++.+..+
T Consensus 200 ~g~~~~~~~Wv~~vgP~~Ga~la~~~y~~~~~~ 232 (234)
T 2o9g_A 200 QGGWALEQLWFFWVVPIVGGIIGGLIYRTLLEK 232 (234)
T ss_dssp HCSHHHHSHHHHHHHHHHHHHHHHHHHHHHTSC
T ss_pred hCCCCCceeeeeehHHhHHHHHHHHHHHHHcCC
Confidence 44467799999999999999999999888754
No 20
>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A
Probab=99.43 E-value=1.6e-13 Score=117.82 Aligned_cols=101 Identities=18% Similarity=0.301 Sum_probs=82.8
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhccC-------CC-CCCCCC--hhHHHHHHHHHHHHHhhcCCCCCCcChhhhHHHHhc
Q 025865 137 GAIEGVVMEIIITFGLVYTVYATAAD-------PK-KGSLGT--IAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVA 206 (247)
Q Consensus 137 ~~~~~~~~E~~~T~~l~~~i~~~~~~-------~~-~~~~~~--~~~~~ig~~v~~~~~~~~~~sG~~lNPAr~lg~~~~ 206 (247)
+..|.+++|+++|++|++..+++... ++ +..... ...+.+|+++++.+++.+++||+|+|||++++.++.
T Consensus 9 ~~~r~~~aEflGT~llv~~g~g~~~~~~~~~~~~~~~g~~~~~~~ial~~Gl~v~~~i~~~g~iSGaHlNPAVTla~~~~ 88 (271)
T 1j4n_A 9 LFWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLS 88 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHGGGCCCSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCcccchHHHHHHHHHHHHHHHHHHhcCCcceEcHHHHHHHHHc
Confidence 46789999999999999987765321 11 111111 457888999999999999999999999999999998
Q ss_pred cC-CCCceeeeeccccHHHHHHHHHHHHHhcC
Q 025865 207 SG-NFQDNWIYWVGPLIGGGLAGLIYGNVFMH 237 (247)
Q Consensus 207 ~~-~~~~~wvy~~~p~~Ga~~a~~~~~~~~~~ 237 (247)
++ +|.+...|+++|++|+++|+.+.+.++.+
T Consensus 89 g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~ 120 (271)
T 1j4n_A 89 CQISVLRAIMYIIAQCVGAIVATAILSGITSS 120 (271)
T ss_dssp TSSCHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 76 78999999999999999999998888754
No 21
>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens}
Probab=99.43 E-value=7.7e-13 Score=113.17 Aligned_cols=102 Identities=22% Similarity=0.357 Sum_probs=83.2
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCchHHHHHHHHHHHHHHHHHHhcCCCcccchHHHHHHHH
Q 025865 12 FSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKVTADAALDPSGLVAIAICHGFALFVAVAVGANISGGHVNPAVTFGLAL 91 (247)
Q Consensus 12 ~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSG~h~NPavTl~~~l 91 (247)
...+..+.++.|+++||+|++.+++.... ++.. +.+ ..++.+|+.+.+.....++.||+.+|||++++..+
T Consensus 125 ~~~s~~~~~~~E~i~Tf~Lv~~il~~~d~-~~~~------~~~--~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal 195 (266)
T 3d9s_A 125 NNTTQGQAMVVELILTFQLALCIFASTDS-RRTS------PVG--SPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAV 195 (266)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHHHHHHHCT-TCCS------CCC--CHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHhcc-cCCC------ccc--hHHHHHHHHHHHHHHHhhccccccccHHHHHHHHH
Confidence 34467899999999999999999876421 1110 011 35788899999999999999999999999999999
Q ss_pred hCCCCcch-hHHHHHHHHHHHHHHHHHHHHHhc
Q 025865 92 GGQITILT-GIFYWIAQLLGSIVASFLLKVVTG 123 (247)
Q Consensus 92 ~g~~~~~~-~~~yi~aQ~~Ga~~g~~~~~~~~~ 123 (247)
... .|.+ .|+||++|++|+++|+++++.+..
T Consensus 196 ~~~-~~~~~~Wvy~vgP~~Ga~la~~~y~~l~~ 227 (266)
T 3d9s_A 196 VMN-RFSPAHWVFWVGPIVGAVLAAILYFYLLF 227 (266)
T ss_dssp HHT-CCCTTHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred HcC-CcccCEeeeehHHHHHHHHHHHHHHHHhC
Confidence 765 7888 999999999999999999988765
No 22
>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens}
Probab=99.41 E-value=1.1e-12 Score=109.67 Aligned_cols=101 Identities=28% Similarity=0.411 Sum_probs=80.3
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCchHHHHHHHHHHHHHHHHHHhcCCCcccchHHHHHHHH
Q 025865 12 FSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKVTADAALDPSGLVAIAICHGFALFVAVAVGANISGGHVNPAVTFGLAL 91 (247)
Q Consensus 12 ~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSG~h~NPavTl~~~l 91 (247)
.+.+..+.++.|+++||+|++..+......+. ...+ ..++.+|+.+.+.....++.||+.+|||++++..+
T Consensus 121 ~~~s~~~~~~~E~i~Tf~Lv~~i~~~~~~~~~-------~~~~--~~pl~iGl~v~~~~~~g~~~TG~a~NPAR~~GP~l 191 (223)
T 3gd8_A 121 GNLTAGHGLLVELIITFQLVFTIFASCDSKRT-------DVTG--SIALAIGFSVAIGHLFAINYTGASMNPARSFGPAV 191 (223)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHHHHHHTCTTCS-------CCCS--CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
T ss_pred CccCHHHHHHHHHHHHHHHHHHHHHHhccccC-------CccC--CccHHHHHHHHHHHHhccCCccccccHHHHHHHHH
Confidence 34467899999999999999998765421111 0011 24678888887777777789999999999999999
Q ss_pred hCCCCcchhHHHHHHHHHHHHHHHHHHHHHh
Q 025865 92 GGQITILTGIFYWIAQLLGSIVASFLLKVVT 122 (247)
Q Consensus 92 ~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~ 122 (247)
... .|.+.|+||++|++|+++|+.+++.++
T Consensus 192 ~~~-~w~~~Wvy~vgP~~Ga~la~~~y~~~~ 221 (223)
T 3gd8_A 192 IMG-NWENHWIYWVGPIIGAVLAGGLYEYVF 221 (223)
T ss_dssp HHT-CCTTTTHHHHHHHHHHHHHHHHHHHTT
T ss_pred Hhc-CCCcEEeehhHHHHHHHHHHHHHHHHc
Confidence 765 799999999999999999999988765
No 23
>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A*
Probab=99.40 E-value=1.5e-12 Score=112.09 Aligned_cols=101 Identities=19% Similarity=0.285 Sum_probs=83.6
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCchHHHHHHHHHHHHHHHHHHhcCCCcccchHHHHHHHHh
Q 025865 13 SLGSFKAYLAEFISTLLFVFAGVGSAIAFNKVTADAALDPSGLVAIAICHGFALFVAVAVGANISGGHVNPAVTFGLALG 92 (247)
Q Consensus 13 ~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSG~h~NPavTl~~~l~ 92 (247)
..+..+.++.|+++||+|++.+++....... . ....++.+|+.+.......++.||+.+|||++++..+.
T Consensus 165 ~~s~~~~~~~E~i~Tf~Lv~~Il~~~~~~~~--------~--~~~~pl~IGl~v~~~~l~~g~~TG~s~NPAR~~GPal~ 234 (279)
T 2w2e_A 165 GASRTRGLFLEAFGTAILCLTVLMLAVEKHR--------A--TWFAPFVIGIALLIAHLICIYYTGAGLNPARSFGPAVA 234 (279)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHHHTTSCST--------T--GGGHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHccCCCC--------C--cCcHHHHHHHHHHHHHHhcccccccccChHHHHHHHHH
Confidence 3467889999999999999998876432111 0 11457889999999999999999999999999999998
Q ss_pred CCCCcchhHHHHHHHHHHHHHHHHHHHHHhc
Q 025865 93 GQITILTGIFYWIAQLLGSIVASFLLKVVTG 123 (247)
Q Consensus 93 g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~ 123 (247)
...-+.+.|+||++|++|+++|+++++.+..
T Consensus 235 ~~~~~~~~WVy~vgPiiGa~la~~ly~~l~~ 265 (279)
T 2w2e_A 235 ARSFPNYHWIYWLGPILGAFLAYSIWQMWKW 265 (279)
T ss_dssp HTCCCTTTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hccchhhhhHHHHHHHHHHHHHHHHHHHHHc
Confidence 7644567999999999999999999888764
No 24
>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A
Probab=99.40 E-value=1.8e-13 Score=119.01 Aligned_cols=102 Identities=19% Similarity=0.205 Sum_probs=83.7
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhccC---CC-CCCCCC--hhHHHHHHHHHHHHHhhcCCCCCCcChhhhHHHHhccC-C
Q 025865 137 GAIEGVVMEIIITFGLVYTVYATAAD---PK-KGSLGT--IAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASG-N 209 (247)
Q Consensus 137 ~~~~~~~~E~~~T~~l~~~i~~~~~~---~~-~~~~~~--~~~~~ig~~v~~~~~~~~~~sG~~lNPAr~lg~~~~~~-~ 209 (247)
+..|.+++|+++|++|++..+++... ++ +..... ...+.+|+++++.+++.+++||+|+|||++++.++.+. +
T Consensus 59 ~~~r~~lAEfiGT~lLv~~g~gsv~~~~~~~~~~~~~g~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~l~g~~~ 138 (304)
T 3cn5_A 59 SFWRAAIAEFIATLLFLYITVATVIGHSKETVVCGSVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVE 138 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSTTCSCHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHHHHTTSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHeEeccccCCCCCCCceeehhhhhhhhheeeeEeeccCCCccCcHHHHHHHHhCCCC
Confidence 56789999999999999988765321 11 111112 35678899999999999999999999999999999876 7
Q ss_pred CCceeeeeccccHHHHHHHHHHHHHhcCC
Q 025865 210 FQDNWIYWVGPLIGGGLAGLIYGNVFMHS 238 (247)
Q Consensus 210 ~~~~wvy~~~p~~Ga~~a~~~~~~~~~~~ 238 (247)
|.+...|+++|++|+++|+.+.+.++.++
T Consensus 139 ~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~~ 167 (304)
T 3cn5_A 139 LLRALVYMIAQCLGAICGVGLVKAFMKGP 167 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 88999999999999999999988887653
No 25
>1ldf_A Glycerol uptake facilitator protein; glycerol-conducting membrane channel protein, transport PROT; HET: BOG; 2.10A {Escherichia coli} SCOP: f.19.1.1 PDB: 1fx8_A* 1lda_A* 1ldi_A*
Probab=99.39 E-value=2.1e-13 Score=117.78 Aligned_cols=102 Identities=17% Similarity=0.149 Sum_probs=83.2
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhccC--CCCCCCCC-hhHHHHHHHHHHHHHhhcCCCCCCcChhhhHHHHhccC-CCCc
Q 025865 137 GAIEGVVMEIIITFGLVYTVYATAAD--PKKGSLGT-IAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASG-NFQD 212 (247)
Q Consensus 137 ~~~~~~~~E~~~T~~l~~~i~~~~~~--~~~~~~~~-~~~~~ig~~v~~~~~~~~~~sG~~lNPAr~lg~~~~~~-~~~~ 212 (247)
+..+.++.|+++|++|++..+++... ..+...+. ...+.+|+++++.+++.+++||+|+|||++++..+.++ +|.+
T Consensus 6 ~~~~~~laEflGT~~Lv~~G~g~~~~~~l~~~~~g~~~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~~ 85 (281)
T 1ldf_A 6 TLKGQCIAEFLGTGLLIFFGVGCVAALKVAGASFGQWEISVIFGLGVAMAIYLTAGVSGAHLNPAVTIALWLFACFDKRK 85 (281)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHSCCCTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHhheecccCcCeeChHHHHHHHHcCCCCHHH
Confidence 56789999999999999987654211 01111111 36788899999999999999999999999999999876 8999
Q ss_pred eeeeeccccHHHHHHHHHHHHHhcCC
Q 025865 213 NWIYWVGPLIGGGLAGLIYGNVFMHS 238 (247)
Q Consensus 213 ~wvy~~~p~~Ga~~a~~~~~~~~~~~ 238 (247)
...|+++|++|+++|+.+.+.++.++
T Consensus 86 ~~~Yi~AQ~lGA~~ga~l~~~~~~~~ 111 (281)
T 1ldf_A 86 VIPFIVSQVAGAFCAAALVYGLYYNL 111 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 99999999999999999888887643
No 26
>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus}
Probab=99.38 E-value=1.5e-12 Score=114.04 Aligned_cols=101 Identities=26% Similarity=0.398 Sum_probs=81.5
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCchHHHHHHHHHHHHHHHHHHhcCCCcccchHHHHHHHHh
Q 025865 13 SLGSFKAYLAEFISTLLFVFAGVGSAIAFNKVTADAALDPSGLVAIAICHGFALFVAVAVGANISGGHVNPAVTFGLALG 92 (247)
Q Consensus 13 ~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSG~h~NPavTl~~~l~ 92 (247)
..+..+.++.|+++||+|++.+++........ ..+ ..++.+|+.+.+.....++.||+.+|||++++..+.
T Consensus 170 ~~s~~~~f~~E~i~Tf~Lv~~Ila~~d~~~~~-------~~~--~~pl~IGl~v~i~~~~g~~~TG~amNPARdlGPal~ 240 (340)
T 3iyz_A 170 NLTAGHGLLVELIITFQLVFTIFASCDDKRTD-------VTG--SVALAIGFSVAIGHLFAINYTGASMNPARSFGPAVI 240 (340)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHhhcCccCC-------ccc--chhhHHHHHHHHHHHhccCCccccccHHHHHHHHHH
Confidence 44678899999999999999988754211110 011 246788888877777777999999999999999998
Q ss_pred CCCCcchhHHHHHHHHHHHHHHHHHHHHHhc
Q 025865 93 GQITILTGIFYWIAQLLGSIVASFLLKVVTG 123 (247)
Q Consensus 93 g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~ 123 (247)
.. .|.+.|+||++|++|+++|+++++.++.
T Consensus 241 ~~-~w~~~WVywvgPiiGailaallY~~l~~ 270 (340)
T 3iyz_A 241 MG-NWENHWIYWVGPIIGAVLAGALYEYVFC 270 (340)
T ss_pred cc-CCCcEeehhHHHHHHHHHHHHHHHHHhC
Confidence 65 6899999999999999999999988874
No 27
>3kcu_A Probable formate transporter 1; TCDB ID 2.A.44.1.1, channel, cell inner membrane, cell membrane, membrane, transmembrane; HET: MA5; 2.24A {Escherichia coli O157} PDB: 3kcv_A 3q7k_A
Probab=89.88 E-value=6 Score=33.49 Aligned_cols=141 Identities=16% Similarity=0.218 Sum_probs=75.5
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCchHHHHHHHHHHHHHHHHHHhcC-CCcccchHHHHHHHH
Q 025865 13 SLGSFKAYLAEFISTLLFVFAGVGSAIAFNKVTADAALDPSGLVAIAICHGFALFVAVAVGANI-SGGHVNPAVTFGLAL 91 (247)
Q Consensus 13 ~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~i-SG~h~NPavTl~~~l 91 (247)
+++..|-++.-+++-+.+-+.............+. ......+..++.+.+++.+.+..-+.. || |--.++ ..+
T Consensus 28 ~~~~~~~~~~~ilAG~~I~~g~~~~~~v~~~~~~~--~~g~~~ll~g~~F~vGL~lVvl~G~ELFTg---n~l~~~-a~~ 101 (285)
T 3kcu_A 28 TKHPLKTFYLAITAGVFISIAFVFYITATTGTGTM--PFGMAKLVGGICFSLGLILCVVCGADLFTS---TVLIVV-AKA 101 (285)
T ss_dssp -CCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSS--CHHHHHHHHHHHHTHHHHHHHHHTCCCTTT---THHHHH-HHT
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc--cccHHHHHHHHHHHHHHHHHHHhCcccccc---chHHHH-HHH
Confidence 34445555666666555555443322211111110 001123455777777777777766664 44 322333 355
Q ss_pred hCCCCcchhHHHHHHHHHHHHHHHHHHHHHh--cCCC---Ccee--------ccCCCCchhHHHHHHHHHHHHHHHHHHH
Q 025865 92 GGQITILTGIFYWIAQLLGSIVASFLLKVVT--GGLA---VPTH--------NVAAGVGAIEGVVMEIIITFGLVYTVYA 158 (247)
Q Consensus 92 ~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~--~~~~---~~~~--------~~~~~~~~~~~~~~E~~~T~~l~~~i~~ 158 (247)
.||.+|++.+--|.-=.+|-++|++++-++. .+.. .+.. .-..+.+..+.|+-=++|-++.++.+..
T Consensus 102 ~~~is~~~~lr~W~~v~~gNliGal~~a~l~~~s~~~~~~~~~~~~~~~~ia~~K~~~~~~~~f~~GIlcN~lVclaVw~ 181 (285)
T 3kcu_A 102 SGRITWGQLAKNWLNVYFGNLVGALLFVLLMWLSGEYMTANGQWGLNVLQTADHKVHHTFIEAVCLGILANLMVCLAVWM 181 (285)
T ss_dssp TTCCCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHTGGGTTTTHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccCchHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 7889998877776666777777766554442 1110 0000 0112346678888888888888887776
Q ss_pred h
Q 025865 159 T 159 (247)
Q Consensus 159 ~ 159 (247)
.
T Consensus 182 ~ 182 (285)
T 3kcu_A 182 S 182 (285)
T ss_dssp H
T ss_pred H
Confidence 5
No 28
>3tds_E Formate/nitrite transporter; membrane protein; HET: PG4 BOG; 1.98A {Clostridium difficile} PDB: 3tdo_A* 3tdr_A* 3te0_A* 3tdx_A* 3te2_A* 3te1_A* 3tdp_A*
Probab=76.44 E-value=32 Score=28.66 Aligned_cols=105 Identities=15% Similarity=0.225 Sum_probs=62.4
Q ss_pred CchHHHHHHHHHHHHHHHHHHhcCCCcccchHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHhc--CCC-Cce
Q 025865 53 SGLVAIAICHGFALFVAVAVGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTG--GLA-VPT 129 (247)
Q Consensus 53 ~~~~~~~l~~g~~~~~~i~~~~~iSG~h~NPavTl~~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~--~~~-~~~ 129 (247)
...+..++.+.+++...+..-+..-=+ |-.......+.||.+|++.+--|.-=.+|-++|++++-++.. +.. .+.
T Consensus 62 ~~~ll~g~~F~~Gl~lVvl~g~eLfTg--n~l~~~~~~~~~~~s~~~~lr~W~~v~~gNliGa~~~a~l~~~sg~~~~~~ 139 (268)
T 3tds_E 62 MTKIVMGLSFAIALSLVIMTGTELFTG--NNMVMSAGMLNKGVSIKDTSKIWAYSWVGNLIGALVLGIIFVGTGLVDKGP 139 (268)
T ss_dssp THHHHHHHTCTHHHHHHHHHTCCCHHH--HHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSSSH
T ss_pred HHHHHHHHHHHHHHHHHHHhCcccccc--chHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCCCcH
Confidence 344556677777776666654443111 433222455788999999888888888888888776555432 111 100
Q ss_pred ec-----c---CCCCchhHHHHHHHHHHHHHHHHHHHh
Q 025865 130 HN-----V---AAGVGAIEGVVMEIIITFGLVYTVYAT 159 (247)
Q Consensus 130 ~~-----~---~~~~~~~~~~~~E~~~T~~l~~~i~~~ 159 (247)
.. . ..+.+..+.|+-=++|-++..+.+...
T Consensus 140 ~~~~~~~ia~~K~~~~~~~~f~~gIlcN~lVclaVw~~ 177 (268)
T 3tds_E 140 VAEFFANTAASKASMPFTALFFRGILCNILVCVSVLCS 177 (268)
T ss_dssp HHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 0 113456777777778888877777654
No 29
>4fc4_A Nitrite transporter NIRC; alpha-helical inner membrane protein, ION channel, cytoplasm membrane, transport protein; HET: BOG; 2.40A {Salmonella enterica subsp}
Probab=71.51 E-value=43 Score=27.79 Aligned_cols=101 Identities=16% Similarity=0.221 Sum_probs=56.9
Q ss_pred HHHHHHHHHHHHHHHHHHhcC-CCcccchHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHhc--CCC-Ccee-
Q 025865 56 VAIAICHGFALFVAVAVGANI-SGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTG--GLA-VPTH- 130 (247)
Q Consensus 56 ~~~~l~~g~~~~~~i~~~~~i-SG~h~NPavTl~~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~--~~~-~~~~- 130 (247)
+..++.+.+++...+..-+.. || |-.......+.||.+|++.+--|.-=.+|-++|++++-++.. +.. .+..
T Consensus 59 ll~g~~F~vGl~lVvl~g~eLfTg---n~l~~~~~~~~~~~s~~~~lr~W~~v~~gNliGa~~~a~l~~~~g~~~~~~~~ 135 (261)
T 4fc4_A 59 LVMGATFGIALTLVIIAGSELFTG---HTMFLTLGVKAGTISHGQMWAILPQTWLGNLVGSVFVALLYSWGGGSLLPVDT 135 (261)
T ss_dssp HHHHHHTTHHHHHHHHTCCCCHHH---HHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTSSCTT
T ss_pred HHHHHHHHHHHHHHHHcCCccccc---chHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccCchHH
Confidence 455666666666555533332 22 433232345578899999888887777787777766554432 110 0100
Q ss_pred ----ccC---CCCchhHHHHHHHHHHHHHHHHHHHh
Q 025865 131 ----NVA---AGVGAIEGVVMEIIITFGLVYTVYAT 159 (247)
Q Consensus 131 ----~~~---~~~~~~~~~~~E~~~T~~l~~~i~~~ 159 (247)
... ...+..+.|+-=++|-++..+.+...
T Consensus 136 ~~~~~ia~~K~~~~~~~~f~~gIlcN~lVclaVw~~ 171 (261)
T 4fc4_A 136 SIVHSVALAKTTAPATVLFFKGALCNWLVCLAIWMA 171 (261)
T ss_dssp SHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 000 01245666777777777777776654
No 30
>3kly_A Putative formate transporter 1; membrane protein, channel, structural genomics, PSI-2, protein structure initiative; HET: BOG; 2.10A {Vibrio cholerae} PDB: 3klz_A*
Probab=65.85 E-value=59 Score=27.22 Aligned_cols=140 Identities=11% Similarity=0.140 Sum_probs=77.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCchHHHHHHHHHHHHHHHHHHhcC-CCcccchHHHHHHHHh
Q 025865 14 LGSFKAYLAEFISTLLFVFAGVGSAIAFNKVTADAALDPSGLVAIAICHGFALFVAVAVGANI-SGGHVNPAVTFGLALG 92 (247)
Q Consensus 14 ~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~i-SG~h~NPavTl~~~l~ 92 (247)
++..|-++.-+++-+.+-+.............+. ......+..++.+.+++.+.+..-+.. ||--+ .++ ..+.
T Consensus 28 ~~~~~~~~~~~~AG~~I~~g~~~~~~v~~~~~~~--~~g~~~ll~g~~F~vGL~lVvl~g~ELFTgn~l---~~~-~~~~ 101 (280)
T 3kly_A 28 KAAYKSFLLAISAGIQIGIAFVFYTVVTTGAHDM--PYGVTKLLGGLAFSLGLILVVITGGELFTSSVL---ILV-AKAS 101 (280)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTS--CHHHHHHHHHHHHHHHHHHHHHHTCCCTTTTCC---CCS-SSSS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC--CccHHHHHHHHHHHHHHHHHHHccccccccchH---HHH-HHHc
Confidence 3444555556666555555443322211111110 001123456777777777777766664 45433 222 3457
Q ss_pred CCCCcchhHHHHHHHHHHHHHHHHHHHHHh--cCCC---Ccee--------ccCCCCchhHHHHHHHHHHHHHHHHHHHh
Q 025865 93 GQITILTGIFYWIAQLLGSIVASFLLKVVT--GGLA---VPTH--------NVAAGVGAIEGVVMEIIITFGLVYTVYAT 159 (247)
Q Consensus 93 g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~--~~~~---~~~~--------~~~~~~~~~~~~~~E~~~T~~l~~~i~~~ 159 (247)
||.+|++.+--|.-=.+|-++|++++-++. .+.. .+.. ....+.+..+.|+-=++|-++.++.+...
T Consensus 102 ~~is~~~~lr~W~~v~~gNliGal~~a~l~~~s~~~~~~~~~~~~~~~~ia~~K~~~~~~~~f~~GIlcN~lVclaVw~~ 181 (280)
T 3kly_A 102 GKISWKELVRNWTVVYFGNLCGSIILVFIMLATRQFMEDGGQLGLNAMAISQHKLHHTFLQAFALGLMCNILVCLAVWMT 181 (280)
T ss_dssp SSCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGTTTTHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccCCchHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 888999988888888888888877655542 1110 0000 01123466788888888888888877765
No 31
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=47.22 E-value=4 Score=35.32 Aligned_cols=19 Identities=32% Similarity=0.517 Sum_probs=16.0
Q ss_pred CCCcccchHHHHHHHHhCC
Q 025865 76 ISGGHVNPAVTFGLALGGQ 94 (247)
Q Consensus 76 iSG~h~NPavTl~~~l~g~ 94 (247)
=||||++||++++-.+..+
T Consensus 11 GTgGHi~palala~~L~~~ 29 (365)
T 3s2u_A 11 GTGGHVFPALACAREFQAR 29 (365)
T ss_dssp SSHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHhC
Confidence 3789999999999888743
Done!