Query 025868
Match_columns 247
No_of_seqs 137 out of 1219
Neff 7.0
Searched_HMMs 29240
Date Mon Mar 25 19:24:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025868.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025868hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2jig_A Prolyl-4 hydroxylase; h 100.0 3.4E-36 1.2E-40 259.4 15.6 178 40-245 10-216 (224)
2 3itq_A Prolyl 4-hydroxylase, a 100.0 4.2E-36 1.4E-40 258.2 15.4 176 38-245 27-211 (216)
3 3dkq_A PKHD-type hydroxylase S 100.0 1.9E-33 6.6E-38 245.4 13.1 176 47-245 17-194 (243)
4 2hbt_A EGL nine homolog 1; pro 99.9 3E-24 1E-28 187.9 15.4 177 42-245 19-212 (247)
5 3kt7_A PKHD-type hydroxylase T 99.4 5.5E-12 1.9E-16 121.1 14.6 171 50-245 35-227 (633)
6 2rg4_A Uncharacterized protein 98.9 3.1E-09 1.1E-13 90.7 9.6 86 131-246 104-207 (216)
7 2a1x_A Phytanoyl-COA dioxygena 98.0 3.8E-05 1.3E-09 67.8 11.6 196 41-242 26-250 (308)
8 2fct_A Syringomycin biosynthes 98.0 3.1E-05 1.1E-09 68.4 10.0 31 42-72 14-44 (313)
9 2opw_A Phyhd1 protein; double- 97.8 2.7E-05 9.1E-10 68.1 6.9 31 42-72 8-38 (291)
10 3emr_A ECTD; double stranded b 97.8 4E-06 1.4E-10 74.9 1.4 33 41-73 38-70 (310)
11 3gja_A CYTC3; halogenase, beta 97.7 8.2E-05 2.8E-09 66.5 8.0 194 42-242 16-258 (319)
12 2rdq_A 1-deoxypentalenic acid 97.6 0.00027 9.2E-09 61.4 9.5 30 43-72 25-54 (288)
13 3nnf_A CURA; non-HAEM Fe(II)/a 96.4 0.0091 3.1E-07 53.0 7.9 128 37-170 24-164 (344)
14 2iuw_A Alkylated repair protei 95.4 0.21 7.2E-06 42.5 12.0 27 50-76 41-68 (238)
15 3tht_A Alkylated DNA repair pr 95.1 0.037 1.3E-06 50.0 6.5 76 131-235 199-276 (345)
16 3s57_A Alpha-ketoglutarate-dep 93.3 0.58 2E-05 38.8 9.8 26 50-75 11-37 (204)
17 3pl0_A Uncharacterized protein 88.6 0.4 1.4E-05 41.4 4.3 43 190-234 183-226 (254)
18 3i3q_A Alpha-ketoglutarate-dep 88.0 1.6 5.6E-05 36.4 7.6 77 131-235 106-185 (211)
19 1dcs_A Deacetoxycephalosporin 86.7 3.8 0.00013 35.9 9.7 81 129-241 156-262 (311)
20 1w9y_A 1-aminocyclopropane-1-c 80.1 4.7 0.00016 35.5 7.4 78 131-241 156-248 (319)
21 3rcq_A Aspartyl/asparaginyl be 78.0 13 0.00046 30.5 9.1 80 131-245 103-182 (197)
22 1odm_A Isopenicillin N synthas 74.1 14 0.00046 32.5 8.7 77 130-241 180-283 (331)
23 3on7_A Oxidoreductase, iron/as 69.2 14 0.00049 31.6 7.5 78 130-240 150-248 (280)
24 1gp6_A Leucoanthocyanidin diox 68.1 18 0.0006 32.2 8.1 77 131-241 211-302 (356)
25 3oox_A Putative 2OG-Fe(II) oxy 67.2 29 0.001 30.0 9.2 78 130-240 169-265 (312)
26 1nx8_A CARC, carbapenem syntha 66.4 6 0.00021 33.4 4.5 39 205-245 231-271 (273)
27 3nsw_A Excretory-secretory pro 64.2 2.5 8.6E-05 29.9 1.3 47 17-66 43-104 (106)
28 2wbq_A L-arginine beta-hydroxy 62.9 6.7 0.00023 34.7 4.2 39 205-245 296-338 (358)
29 2og5_A Putative oxygenase; non 61.4 7.1 0.00024 34.6 4.2 39 205-245 291-333 (357)
30 3lwc_A Uncharacterized protein 57.4 54 0.0018 24.0 7.9 23 207-232 78-100 (119)
31 2ozj_A Cupin 2, conserved barr 56.5 44 0.0015 23.5 7.2 30 207-240 77-106 (114)
32 1otj_A Alpha-ketoglutarate-dep 55.6 12 0.00042 31.6 4.5 39 205-245 235-274 (283)
33 1ds1_A Clavaminate synthase 1; 55.6 9.8 0.00034 33.1 4.0 39 205-245 259-301 (324)
34 3o2g_A Gamma-butyrobetaine dio 54.7 10 0.00034 34.2 4.0 38 205-244 328-368 (388)
35 1otj_A Alpha-ketoglutarate-dep 47.9 17 0.00059 30.7 4.2 35 144-200 97-131 (283)
36 1oih_A Putative alkylsulfatase 46.2 20 0.0007 30.6 4.4 39 140-200 102-140 (301)
37 1yhf_A Hypothetical protein SP 43.9 79 0.0027 22.0 7.9 22 209-233 81-102 (115)
38 3pvj_A Alpha-ketoglutarate-dep 43.9 21 0.00071 30.5 4.1 37 141-199 92-128 (277)
39 3eat_X Pyoverdine biosynthesis 43.1 25 0.00086 30.1 4.5 39 205-245 241-280 (293)
40 2q4a_A Clavaminate synthase-li 40.0 21 0.00071 30.9 3.5 40 139-200 113-152 (330)
41 1nx8_A CARC, carbapenem syntha 39.8 16 0.00055 30.7 2.7 38 141-200 96-135 (273)
42 2wbq_A L-arginine beta-hydroxy 38.5 31 0.0011 30.2 4.5 37 141-200 163-199 (358)
43 3r1j_A Alpha-ketoglutarate-dep 38.1 30 0.001 30.0 4.2 37 141-199 98-134 (301)
44 3eat_X Pyoverdine biosynthesis 37.8 31 0.0011 29.5 4.3 39 142-200 108-146 (293)
45 3o2g_A Gamma-butyrobetaine dio 36.8 32 0.0011 30.8 4.4 37 142-200 199-235 (388)
46 1oih_A Putative alkylsulfatase 36.8 30 0.001 29.5 4.0 39 205-245 244-283 (301)
47 2og5_A Putative oxygenase; non 35.3 26 0.0009 30.9 3.5 37 141-199 174-210 (357)
48 2dbn_A Hypothetical protein YB 34.8 17 0.00057 33.9 2.1 31 42-72 118-148 (461)
49 4aiv_A Probable nitrite reduct 33.0 1.4E+02 0.0049 21.8 7.0 45 188-235 18-62 (119)
50 3ktp_B Trinucleotide repeat-co 32.1 18 0.00062 19.1 1.1 12 28-39 2-14 (22)
51 3rns_A Cupin 2 conserved barre 31.1 2E+02 0.007 23.1 8.2 31 208-241 193-223 (227)
52 2q1z_B Anti-sigma factor CHRR, 29.4 1.7E+02 0.0059 23.2 7.2 20 130-149 125-144 (195)
53 2q4a_A Clavaminate synthase-li 26.3 34 0.0012 29.5 2.6 33 206-241 294-326 (330)
54 1jr7_A GABT protein, hypotheti 26.1 74 0.0025 27.9 4.7 40 205-246 258-300 (311)
55 3fjs_A Uncharacterized protein 25.9 1.8E+02 0.006 20.6 7.7 28 208-239 76-103 (114)
56 1dgw_A Canavalin; duplicated s 24.6 1.7E+02 0.006 22.6 6.4 24 209-235 86-109 (178)
57 3es4_A Uncharacterized protein 24.1 45 0.0015 24.9 2.5 26 208-233 82-107 (116)
58 3d82_A Cupin 2, conserved barr 23.1 86 0.0029 21.1 3.8 20 210-232 72-91 (102)
59 1ds1_A Clavaminate synthase 1; 22.4 94 0.0032 26.6 4.6 38 140-199 138-176 (324)
60 1vm9_A Toluene-4-monooxygenase 21.9 2.1E+02 0.0072 20.1 5.9 44 189-235 11-54 (111)
61 4e2g_A Cupin 2 conserved barre 20.9 2.2E+02 0.0076 19.9 8.4 24 208-234 81-104 (126)
62 4e2q_A Ureidoglycine aminohydr 20.9 3.8E+02 0.013 22.6 8.9 31 211-244 230-261 (266)
63 3dgp_A RNA polymerase II trans 20.7 73 0.0025 22.2 2.8 29 46-74 18-46 (80)
64 3ksc_A LEGA class, prolegumin; 20.4 1.4E+02 0.0049 27.8 5.7 28 210-240 407-434 (496)
No 1
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=100.00 E-value=3.4e-36 Score=259.40 Aligned_cols=178 Identities=22% Similarity=0.286 Sum_probs=140.8
Q ss_pred cceeeeec-CCCEEEEcCCCCHHHHHHHHHHHHhCCceeccC----CCCccCCceeecceEEecC--HHHHHHHHHHhhh
Q 025868 40 DLRVSRLK-DTDLFTVQNFFTSAESKGFVKAAEAMGFVHQGS----LGPLKGEAYRDNDRISVND--PVLAETVWESGLS 112 (247)
Q Consensus 40 ~l~v~~~~-~~~i~vi~~fLs~~EC~~Li~~~e~~~~~~~~~----~~~~~~~~~R~~~~~~~~~--~~~~~~l~~ri~~ 112 (247)
..++|.|+ ++.|++++||||++||++||++++. .+.++.. .+......+|++...|++. ..+++.|++|+..
T Consensus 10 ~~k~e~ls~~P~i~~~~~fLs~~Ec~~li~~~~~-~~~~s~v~~~~~g~~~~~~~R~s~~~~l~~~~~~~~~~i~~ri~~ 88 (224)
T 2jig_A 10 RGEVVHLSWSPRAFLLKNFLSDEECDYIVEKARP-KMVKSSVVDNESGKSVDSEIRTSTGTWFAKGEDSVISKIEKRVAQ 88 (224)
T ss_dssp CCCEEEEETTTTEEEETTCSCHHHHHHHHHHHGG-GCEECEEEETTTTEEEECSSBCSEEEECCTTCSHHHHHHHHHHHH
T ss_pred CcceEEEeCCCCEEEEcccCCHHHHHHHHHHhhc-cCeeeeeecCCCCcccccCCEEEeeeEecCCCCHHHHHHHHHHHH
Confidence 35678887 6799999999999999999999987 3554432 1222345689998899874 5688889988633
Q ss_pred hhhhhhhhhcccccccCCceEEEecCCCCcccccccCCccC-----CCCceeEEEEEEEecCccccccccccCCCCCCCC
Q 025868 113 KLFTDIKIRGKLAVGLNPNIRFYRYKVGQRFGQHIDESVNL-----GDGKRTHYTLLIYLSGGLKAKAKNDLSIHNDSSP 187 (247)
Q Consensus 113 ~~~~~~~~~~~~~~~l~e~~q~~rY~~G~~f~~H~D~~~~~-----~~~~~r~~T~llYLN~~~~~~~~~~~~~~~~~~~ 187 (247)
+. ..+...+|.+||+||.+|++|++|+|.+... ..+.+|++|+|+|||
T Consensus 89 -~~-------gl~~~~~e~~qv~rY~~G~~y~~H~D~~~~~~~~~~~~~~~R~~T~l~YLn------------------- 141 (224)
T 2jig_A 89 -VT-------MIPLENHEGLQVLHYHDGQKYEPHYDYFHDPVNAGPEHGGQRVVTMLMYLT------------------- 141 (224)
T ss_dssp -HH-------TCCGGGBCCCEEEEEETTCCEEEECCSSCCTTSSSCCCCSCEEEEEEEECS-------------------
T ss_pred -Hh-------CCCcccccceEEEecCCCccccCcccCCCCccccccccCCCeEEEEEEEec-------------------
Confidence 21 1334567899999999999999999997643 234578999999999
Q ss_pred CCCcCcceEEecCCC-----------ceeeEEecCCCcEEEEec------CCCCCcccccccccccEEEEEEeee
Q 025868 188 EPLVGGETVFYGSRN-----------KLLAEVAPIEGMALIHIH------GDKCMLHEARNVIKGVKYIFRSDVV 245 (247)
Q Consensus 188 d~~eGGeT~F~~~~~-----------~~~~~V~P~~G~aviF~~------~d~~~lH~g~PV~~G~Kyiirtdv~ 245 (247)
|+++||||+|+.... +..+.|+|++|+||||++ .|.+++|+||||++|+||+++.|+-
T Consensus 142 d~~~GGeT~Fp~~~~~~~~~~~~~c~~~~~~V~P~~G~al~f~~~~~~g~~d~~~lH~~~PV~~G~K~~~~~Wi~ 216 (224)
T 2jig_A 142 TVEEGGETVLPNAEQKVTGDGWSECAKRGLAVKPIKGDALMFYSLKPDGSNDPASLHGSCPTLKGDKWSATKWIH 216 (224)
T ss_dssp CCSEECCEEETTSSSCCCSTTSCTTGGGSEEECCCTTCEEEEESBCTTSCBCGGGCEEECCEEESEEEEEEEEEE
T ss_pred CCCCCCceeCCCcccccccccccccccCceEEecccCcEEEEEeeCCCCCCCCCCcccCCccccceEEEEEEeEE
Confidence 788999999997531 125899999999999987 1457999999999999999999984
No 2
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=100.00 E-value=4.2e-36 Score=258.23 Aligned_cols=176 Identities=19% Similarity=0.255 Sum_probs=140.4
Q ss_pred CCcceeeeec-CCCEEEEcCCCCHHHHHHHHHHHHhCCceeccCCCCccCCceeecceEEecCHHHHHHHHHHhhhhhhh
Q 025868 38 KQDLRVSRLK-DTDLFTVQNFFTSAESKGFVKAAEAMGFVHQGSLGPLKGEAYRDNDRISVNDPVLAETVWESGLSKLFT 116 (247)
Q Consensus 38 ~~~l~v~~~~-~~~i~vi~~fLs~~EC~~Li~~~e~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~~l~~ri~~~~~~ 116 (247)
...++++.+. +|.|++++||||++||++||++++.. +.++..........+|++..+|+++.++++.|++|+ ..+.
T Consensus 27 ~r~v~v~~l~~~P~i~~~~~fLs~~Ec~~Li~~a~~~-l~~s~v~~~~~~~~~RtS~~~wl~~~~~v~~i~~Ri-~~~~- 103 (216)
T 3itq_A 27 DREIQIISKFEEPLIVVLGNVLSDEECDELIELSKSK-LARSKVGSSRDVNDIRTSSGAFLDDNELTAKIEKRI-SSIM- 103 (216)
T ss_dssp SCEEEEEEEETTTTEEEEESCSCHHHHHHHHHHHHHH-HC--------CCCCGGGTTCEECCCCHHHHHHHHHH-HHHH-
T ss_pred CceEEEEEeeCCCCEEEECCcCCHHHHHHHHHHhhcc-cccceeccCCccCCcEeeeeEEeCCcHHHHHHHHHH-HHhc-
Confidence 4567777776 68999999999999999999999874 655543222345679999999998888899999996 3322
Q ss_pred hhhhhcccccccCCceEEEecCCCCcccccccCCccCC--CCceeEEEEEEEecCccccccccccCCCCCCCCCCCcCcc
Q 025868 117 DIKIRGKLAVGLNPNIRFYRYKVGQRFGQHIDESVNLG--DGKRTHYTLLIYLSGGLKAKAKNDLSIHNDSSPEPLVGGE 194 (247)
Q Consensus 117 ~~~~~~~~~~~l~e~~q~~rY~~G~~f~~H~D~~~~~~--~~~~r~~T~llYLN~~~~~~~~~~~~~~~~~~~d~~eGGe 194 (247)
| .+...+|.+|++||++|++|++|+|.+.... ..++|++|+++||| |+++|||
T Consensus 104 -----g-l~~~~~E~lqv~~Y~~G~~y~~H~D~~~~~~~~~~~~R~~T~l~YLn-------------------d~~~GGe 158 (216)
T 3itq_A 104 -----N-VPASHGEGLHILNYEVDQQYKAHYDYFAEHSRSAANNRISTLVMYLN-------------------DVEEGGE 158 (216)
T ss_dssp -----T-SCGGGBCCCEEEEECBTCCEEEECSSCCTTSGGGGGCEEEEEEEECS-------------------CCSEECC
T ss_pred -----C-ceeccccceeEEEeCCCCccccccCCCcCCCcccCCceEEEEEEecc-------------------cCCcCce
Confidence 2 2334568999999999999999999986421 13578999999999 7899999
Q ss_pred eEEecCCCceeeEEecCCCcEEEEecC------CCCCcccccccccccEEEEEEeee
Q 025868 195 TVFYGSRNKLLAEVAPIEGMALIHIHG------DKCMLHEARNVIKGVKYIFRSDVV 245 (247)
Q Consensus 195 T~F~~~~~~~~~~V~P~~G~aviF~~~------d~~~lH~g~PV~~G~Kyiirtdv~ 245 (247)
|.|+.. +++|+|++|+||+|+|. |.+++|+||||++|+||++..|+-
T Consensus 159 T~Fp~~----~~~V~P~~G~al~f~~~~~~g~~d~~~lH~~~PV~~G~K~v~~~W~~ 211 (216)
T 3itq_A 159 TFFPKL----NLSVHPRKGMAVYFEYFYQDQSLNELTLHGGAPVTKGEKWIATQWVR 211 (216)
T ss_dssp EEETTT----TEEECCCTTCEEEEECCCSSHHHHHTTCEEECCEEESCEEEEEEEEE
T ss_pred eEecCC----CCEEecCCCeEEEEeccCCCCCCCCccccccceeccccEEEEEeeEe
Confidence 999864 48999999999999983 246899999999999999999974
No 3
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=100.00 E-value=1.9e-33 Score=245.43 Aligned_cols=176 Identities=18% Similarity=0.218 Sum_probs=136.0
Q ss_pred cCCCEEEEcCCCCHHHHHHHHHHHHhCCceeccCCCCccCCceeecceEEecCHHHHHHHHHHhhhhhhhhhhhhccccc
Q 025868 47 KDTDLFTVQNFFTSAESKGFVKAAEAMGFVHQGSLGPLKGEAYRDNDRISVNDPVLAETVWESGLSKLFTDIKIRGKLAV 126 (247)
Q Consensus 47 ~~~~i~vi~~fLs~~EC~~Li~~~e~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~~l~~ri~~~~~~~~~~~~~~~~ 126 (247)
-+..+++|+||||++||++||++++..+|.++..........+|++.++..++ .+++.|++++...+-....+....+.
T Consensus 17 ~~~~i~~i~dvLs~~Ec~~li~~~e~~~~~dg~~t~g~~~~~vr~n~~l~~d~-~~~~~l~~~i~~~l~~~~~f~~~~L~ 95 (243)
T 3dkq_A 17 FQGMLIEIPNVFSKQEVSHLREQLDARRWIDGNQTSGAMATTRKRNQQLDKDD-PVAVALGQQIMDRLLAHPQFVSAALP 95 (243)
T ss_dssp CBTTBEEECCSSCHHHHHHHHHHHHTSCCEEECCCSSBSSCCCEEEEECCTTC-HHHHHHHHHHHHHHHTCHHHHHHHCE
T ss_pred cCCCEEEECCCCCHHHHHHHHHHHhhCCCccCcccCCCccccceeeeEECCCC-HHHHHHHHHHHHHHccCcchhhcccc
Confidence 46799999999999999999999999888876544444456788887766444 58899999864433221111110011
Q ss_pred ccCCceEEEecCCCCcccccccCCccCCC--CceeEEEEEEEecCccccccccccCCCCCCCCCCCcCcceEEecCCCce
Q 025868 127 GLNPNIRFYRYKVGQRFGQHIDESVNLGD--GKRTHYTLLIYLSGGLKAKAKNDLSIHNDSSPEPLVGGETVFYGSRNKL 204 (247)
Q Consensus 127 ~l~e~~q~~rY~~G~~f~~H~D~~~~~~~--~~~r~~T~llYLN~~~~~~~~~~~~~~~~~~~d~~eGGeT~F~~~~~~~ 204 (247)
...+.+||+||++|++|++|+|.+..... +.+|.+|+++|||++ ++++||||+|+...+
T Consensus 96 ~~~e~~~~~rY~~G~~y~~H~D~~~~~~~~~~~~r~~T~~lYLndp-----------------~~~~GGetvf~~~~~-- 156 (243)
T 3dkq_A 96 LQFYPPLFNRYQGGETFGYHIDNAIRSTPDGMIRTDLSATLFLSEP-----------------ENYQGGELVIQDTYG-- 156 (243)
T ss_dssp EEEEEEEEEEECTTCEEEEECBCSEEEETTEEEECCEEEEEECSCG-----------------GGEEECCEEEEETTE--
T ss_pred cccccceEEEECCCCeeccCCCCCCCCCCCccccceEEEEEEeCCC-----------------CCCCCceEEEeeCCC--
Confidence 11356999999999999999999865432 246799999999943 489999999997542
Q ss_pred eeEEecCCCcEEEEecCCCCCcccccccccccEEEEEEeee
Q 025868 205 LAEVAPIEGMALIHIHGDKCMLHEARNVIKGVKYIFRSDVV 245 (247)
Q Consensus 205 ~~~V~P~~G~aviF~~~d~~~lH~g~PV~~G~Kyiirtdv~ 245 (247)
...|+|++|++|+|++. ++|+|+||++|.||++..|+-
T Consensus 157 ~~~V~P~~G~~v~F~s~---~lH~v~pV~~G~R~~~~~Wi~ 194 (243)
T 3dkq_A 157 QQSIKLSAGSLVLYPSS---SLHQVTPVLSGERTAAFMWLQ 194 (243)
T ss_dssp EEEECCCTTCEEEEETT---SEEEECCEEEECEEEEEEEEE
T ss_pred cEEEecCCCEEEEECCC---CeEcCccccccCEEEEEEehh
Confidence 47899999999999997 899999999999999999973
No 4
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=99.92 E-value=3e-24 Score=187.87 Aligned_cols=177 Identities=15% Similarity=0.232 Sum_probs=126.6
Q ss_pred eeeeecCCCEEEEcCCCCHHHHHHHHHHHHhC----CceeccCCC--CccCCceeecceEEecCHH--H--HHHHHHHhh
Q 025868 42 RVSRLKDTDLFTVQNFFTSAESKGFVKAAEAM----GFVHQGSLG--PLKGEAYRDNDRISVNDPV--L--AETVWESGL 111 (247)
Q Consensus 42 ~v~~~~~~~i~vi~~fLs~~EC~~Li~~~e~~----~~~~~~~~~--~~~~~~~R~~~~~~~~~~~--~--~~~l~~ri~ 111 (247)
.++.|...++++++|||+++||+.|++.++.. .|.++.... ......+|++...|++... . ...++++ +
T Consensus 19 i~~~L~~~g~~Vid~fLs~ee~~~L~~~~~~~~~~g~~~~a~i~~~~~~~~~~iR~d~i~wl~~~~~~~~~~~~l~~~-i 97 (247)
T 2hbt_A 19 IVPCMNKHGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRGDKITWIEGKEPGCETIGLLMSS-M 97 (247)
T ss_dssp HHHHHHHTSEEEESSSSCHHHHHHHHHHHHHHHHTTCSCSCCEEECCSSSTTCEECCEEEEECSCSTTCHHHHHHHHH-H
T ss_pred HHHHhccCCEEEECCCCCHHHHHHHHHHHHhhhhcCCccccccccccccccccccccceeeecccccchhHHHHHHHH-H
Confidence 45567778999999999999999999999862 244432211 2235678988888887532 1 1123343 2
Q ss_pred hhhhhhhhhhccccccc-----CCceEEEecCC-CCcccccccCCccCCCCceeEEEEEEEecCccccccccccCCCCCC
Q 025868 112 SKLFTDIKIRGKLAVGL-----NPNIRFYRYKV-GQRFGQHIDESVNLGDGKRTHYTLLIYLSGGLKAKAKNDLSIHNDS 185 (247)
Q Consensus 112 ~~~~~~~~~~~~~~~~l-----~e~~q~~rY~~-G~~f~~H~D~~~~~~~~~~r~~T~llYLN~~~~~~~~~~~~~~~~~ 185 (247)
..+... ++.. .++ ...+|+++|.+ |++|.+|.|... +..|.+|+++|||+.|
T Consensus 98 ~~l~~~--ln~~--lGl~~i~~~~e~~~~~Y~~~G~~y~~H~D~~~----~~~R~~T~vlYLN~~w-------------- 155 (247)
T 2hbt_A 98 DDLIRH--CNGK--LGSYKINGRTKAMVACYPGNGTGYVRHVDNPN----GDGRCVTCIYYLNKDW-------------- 155 (247)
T ss_dssp HHHHHH--TTTT--STTCCEEEECCEEEEEECSSSCCEEEECSSCS----CCSEEEEEEEECBTTC--------------
T ss_pred HHHHHH--Hhhh--cCcccccccceEEEEEecCCCCcccccccCCC----CCCceEEEEEEeCCCC--------------
Confidence 333321 1111 122 14589999996 999999999942 2357899999999776
Q ss_pred CCC-CCcCcceEEecCCCceeeEEecCCCcEEEEecCCCCCcccccccccccEEEEEEeee
Q 025868 186 SPE-PLVGGETVFYGSRNKLLAEVAPIEGMALIHIHGDKCMLHEARNVIKGVKYIFRSDVV 245 (247)
Q Consensus 186 ~~d-~~eGGeT~F~~~~~~~~~~V~P~~G~aviF~~~d~~~lH~g~PV~~G~Kyiirtdv~ 245 (247)
+ +.+||+|.|+.........|.|+.|++|+|++. .+++|+|+|+ .|.||+|..|+.
T Consensus 156 --~~~~~GG~l~~~~~~~~~~~~v~P~~grlv~F~s~-~~~~H~V~p~-~~~R~sit~W~~ 212 (247)
T 2hbt_A 156 --DAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSD-RRNPHEVQPA-YATRYAITVWYF 212 (247)
T ss_dssp --CHHHHBCCEEECCTTCSSCEEECCBTTEEEEEECS-TTCCEEECCB-SSCEEEEEEEEE
T ss_pred --CCCCCceeEEEecCCCCceEEEEcCCCEEEEEecC-CCceeeeccC-CCEEEEEEEEEc
Confidence 6 589999998865443457899999999999975 3479999995 689999999873
No 5
>3kt7_A PKHD-type hydroxylase TPA1; double-stranded beta helix fold, dioxygenase, iron, mRNP complex, prolyl hydroxylase; HET: AKG; 1.77A {Saccharomyces cerevisiae} PDB: 3kt1_A 3kt4_A 3mgu_A
Probab=99.37 E-value=5.5e-12 Score=121.13 Aligned_cols=171 Identities=14% Similarity=0.156 Sum_probs=108.6
Q ss_pred CEEEEcCCCCHHHHHHHHHHHH-hCCceeccCCCCccCCceeecceEEec---------CHHHHHHHHHHhh----hhhh
Q 025868 50 DLFTVQNFFTSAESKGFVKAAE-AMGFVHQGSLGPLKGEAYRDNDRISVN---------DPVLAETVWESGL----SKLF 115 (247)
Q Consensus 50 ~i~vi~~fLs~~EC~~Li~~~e-~~~~~~~~~~~~~~~~~~R~~~~~~~~---------~~~~~~~l~~ri~----~~~~ 115 (247)
+.++|+|||+++..+.|.+.+. ...|..... .. -+.+++.+...++ .+.+ ..|...+. ..++
T Consensus 35 pH~VIdnfl~d~lle~V~~Efp~~i~f~~Ket--Dl-Yk~~QsgdLanl~~l~~e~l~~lp~l-~~Lr~~L~S~~Fr~~L 110 (633)
T 3kt7_A 35 NWGTIHELVNDDLLRAVRKEIETEIHFTKKET--DI-YRVNQSGDLANLSGLDWDDLSRLPNL-FKLRQILYSKQYRDFF 110 (633)
T ss_dssp CCEEESSCBCHHHHHHHHHHHHHHCCCEEEEC--SS-EEEEECCCTTCTTSCCTTCCTTCHHH-HHHHHHHTSHHHHHHH
T ss_pred ceEEECCCCCHHHHHHHHHHhhhccCcccccc--cc-cceeccccccccccCChhhhccChHH-HHHHHHHhcHHHHHHH
Confidence 7889999999999999998886 345543210 00 0001111110111 1221 22222211 1122
Q ss_pred hhhhhhcc-cccccCCceEEEecCCCCcccccccCCccCCCCceeEEEEEEEecCccccccccccCCCCCCCCCCCcCcc
Q 025868 116 TDIKIRGK-LAVGLNPNIRFYRYKVGQRFGQHIDESVNLGDGKRTHYTLLIYLSGGLKAKAKNDLSIHNDSSPEPLVGGE 194 (247)
Q Consensus 116 ~~~~~~~~-~~~~l~e~~q~~rY~~G~~f~~H~D~~~~~~~~~~r~~T~llYLN~~~~~~~~~~~~~~~~~~~d~~eGGe 194 (247)
. .+.|- .+.+....+++.+|.+|.+|..|.|.. +. |.+|+++|||+. +..|....||+
T Consensus 111 s--~iTGi~~Lsg~~~D~~~a~Y~~G~fL~~H~D~~-----~~-RrvS~VLYLN~p-------------d~~W~~e~GGe 169 (633)
T 3kt7_A 111 G--YVTKAGKLSGSKTDMSINTYTKGCHLLTHDDVI-----GS-RRISFILYLPDP-------------DRKWKSHYGGG 169 (633)
T ss_dssp H--HHHTCCCCCSSCCCEEEEEECTTCEEEEECCCC-----TT-EEEEEEEECSCT-------------TSCCCGGGBCC
T ss_pred H--HHhCCcccCCCceeEEEEEeCCCCeeeecCCCC-----CC-eEEEEEEEcCCC-------------CCCCCccCCce
Confidence 2 12232 233333468999999999999999974 12 669999999962 00137889999
Q ss_pred eEEecCC------CceeeEEecCCCcEEEEecCCCCCccccccccc-ccEEEEEEeee
Q 025868 195 TVFYGSR------NKLLAEVAPIEGMALIHIHGDKCMLHEARNVIK-GVKYIFRSDVV 245 (247)
Q Consensus 195 T~F~~~~------~~~~~~V~P~~G~aviF~~~d~~~lH~g~PV~~-G~Kyiirtdv~ 245 (247)
+.++..+ .....+|.|.-|++|||......++|++.+|.. ..|+.|..|+.
T Consensus 170 L~Lyd~d~~~~P~~d~~~~I~P~fNrLV~F~vsp~~S~H~V~eV~~~~~RlSItGWF~ 227 (633)
T 3kt7_A 170 LRLFPSILPNVPHSDPSAKLVPQFNQIAFFKVLPGFSFHDXEEVKVDKHRLSIQGWYH 227 (633)
T ss_dssp EEECCEEETTEECSSCSEEECCCTTEEEEEECCTTTCCEEECCBCSSCCEEEEEEEEE
T ss_pred EEEecCCCcCCCCCCceEEEecCCCeEEEEEcCCCCCcCCCCccCCCCCEEEEEEEec
Confidence 9998754 224568999999999998752258999999984 56999999974
No 6
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=98.94 E-value=3.1e-09 Score=90.69 Aligned_cols=86 Identities=17% Similarity=0.165 Sum_probs=70.5
Q ss_pred ceEEEecCCCCcccccccCCccCCCCceeEEEEEEEecCccccccccccCCCCCCCCCCCcCcceEEecCCC--------
Q 025868 131 NIRFYRYKVGQRFGQHIDESVNLGDGKRTHYTLLIYLSGGLKAKAKNDLSIHNDSSPEPLVGGETVFYGSRN-------- 202 (247)
Q Consensus 131 ~~q~~rY~~G~~f~~H~D~~~~~~~~~~r~~T~llYLN~~~~~~~~~~~~~~~~~~~d~~eGGeT~F~~~~~-------- 202 (247)
..-+++|.+|+++.+|.|.. +.+|.++||| .+..||++.|+....
T Consensus 104 ~~W~~~~~~G~~~~~H~H~~--------~~lSgV~Yl~-------------------~p~~~G~L~f~~p~~~~~~~~~~ 156 (216)
T 2rg4_A 104 DIWINILPEGGVHGSHIHPH--------SVISGTTYVA-------------------MPEGTSALKLEDPRLPFMMAAPT 156 (216)
T ss_dssp EEEEEEECTTCCEEEECCTT--------CSEEEEEEEE-------------------CCSCSCCEEEECTTGGGCSSSCC
T ss_pred eEEEEEcCCCCcccCccCCC--------CeEEEEEEEE-------------------CCCCCccEEEeCCccccccccCc
Confidence 35578999999999999952 4699999999 455799999986420
Q ss_pred ---------ceeeEEecCCCcEEEEecCCCCCccccccccc-ccEEEEEEeeee
Q 025868 203 ---------KLLAEVAPIEGMALIHIHGDKCMLHEARNVIK-GVKYIFRSDVVF 246 (247)
Q Consensus 203 ---------~~~~~V~P~~G~aviF~~~d~~~lH~g~PV~~-G~Kyiirtdv~y 246 (247)
.....|+|+.|++||||+. +.|+|.|... +.|++|--++++
T Consensus 157 ~~~~~~~~~~~~~~i~P~~G~lvlFpS~---l~H~V~p~~~~~~RiSIsFN~~~ 207 (216)
T 2rg4_A 157 RRKGAREELRTFRSVAPKVGDVLLWESW---LRHEVPMNMAEEDRISVSFNYAW 207 (216)
T ss_dssp CCCCSCGGGCSEEEECCCTTEEEEEETT---SCEEECCCCSSSCEEEEEEEEEC
T ss_pred ccccCcccCCCeeEecCCCCeEEEECCC---CEEeccCCCCCCCEEEEEEEeec
Confidence 1224789999999999986 9999999886 689999988875
No 7
>2a1x_A Phytanoyl-COA dioxygenase; beta jelly roll, double-stranded beta-helix, structural GENO structural genomics consortium, SGC, oxidoreductase; HET: AKG; 2.50A {Homo sapiens} SCOP: b.82.2.9
Probab=98.04 E-value=3.8e-05 Score=67.81 Aligned_cols=196 Identities=12% Similarity=0.053 Sum_probs=89.0
Q ss_pred ceeeeecCCCEEEEcCCCCHHHHHHHHHHHHhC---CceeccCC--------CCccCCceeecceE--EecCHHHHHHHH
Q 025868 41 LRVSRLKDTDLFTVQNFFTSAESKGFVKAAEAM---GFVHQGSL--------GPLKGEAYRDNDRI--SVNDPVLAETVW 107 (247)
Q Consensus 41 l~v~~~~~~~i~vi~~fLs~~EC~~Li~~~e~~---~~~~~~~~--------~~~~~~~~R~~~~~--~~~~~~~~~~l~ 107 (247)
-+++.+...+++++++||++++|+.|.+.++.. .....+.. ........+.-.++ +..++.+.+.+.
T Consensus 26 e~~~~f~~dGyvvl~~~l~~e~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 105 (308)
T 2a1x_A 26 EQRKFYEENGFLVIKNLVPDADIQRFRNEFEKICRKEVKPLGLTVMRDVTISKSEYAPSEKMITKVQDFQEDKELFRYCT 105 (308)
T ss_dssp THHHHHHHHSEEEETTCSCHHHHHHHHHHHHHHHTTSCCCSSCEEECCEEECCCE-----EECCEEECCTTSHHHHHHHH
T ss_pred HHHHHHHhCCEEEccCCCCHHHHHHHHHHHHHHHhccccCCCccccccccccccccCchHHHHhhhhhhhhCHHHHHHHh
Confidence 345667788999999999999999999988773 11100000 00000000111111 223444433222
Q ss_pred HHhhhhhhhhhhhhcccccccCCceEEEecCC-CCc---ccccccCCccCCCCceeEEEEEEEecCcccccc--ccccCC
Q 025868 108 ESGLSKLFTDIKIRGKLAVGLNPNIRFYRYKV-GQR---FGQHIDESVNLGDGKRTHYTLLIYLSGGLKAKA--KNDLSI 181 (247)
Q Consensus 108 ~ri~~~~~~~~~~~~~~~~~l~e~~q~~rY~~-G~~---f~~H~D~~~~~~~~~~r~~T~llYLN~~~~~~~--~~~~~~ 181 (247)
...+..++.. +.|..+. +....-+.+... |+. ..+|.|..+-......+.+|+.++|.|....+- .-.-++
T Consensus 106 ~p~l~~~~~~--llG~~~~-~~~~~~~~k~P~~g~~~~~~~wHqD~~~~~~~p~~~~v~~wiaL~D~~~enG~l~~vPGS 182 (308)
T 2a1x_A 106 LPEILKYVEC--FTGPNIM-AMHTMLINKPPDSGKKTSRHPLHQDLHYFPFRPSDLIVCAWTAMEHISRNNGCLVVLPGT 182 (308)
T ss_dssp CHHHHHHHHH--HHCSSEE-EEEEEEEEECCC--------CCBCGGGGCCEECGGGEEEEEEESSCBCTTBTCEEECTTG
T ss_pred CHHHHHHHHH--hcCCCcc-eecceEEEcCCCCCCCccCCCCccCCccccCCCCCCeEEEEEEeeccCCCCCcEEEEcCC
Confidence 2111122211 2221111 111122334332 322 479999865321112357999999997632220 000011
Q ss_pred CCCCCC----CCCcCcce-EEec---C-CCceeeEEecCCCcEEEEecCCCCCccccccccc-ccEEEEEE
Q 025868 182 HNDSSP----EPLVGGET-VFYG---S-RNKLLAEVAPIEGMALIHIHGDKCMLHEARNVIK-GVKYIFRS 242 (247)
Q Consensus 182 ~~~~~~----d~~eGGeT-~F~~---~-~~~~~~~V~P~~G~aviF~~~d~~~lH~g~PV~~-G~Kyiirt 242 (247)
+..+.. ....+|.. .|.. . .....+.+.-++|++|||... ++|++.|-.+ ..|+++..
T Consensus 183 H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~aGd~vlf~~~---~~H~s~~N~s~~~R~~~~~ 250 (308)
T 2a1x_A 183 HKGSLKPHDYPKWEGGVNKMFHGIQDYEENKARVHLVMEKGDTVFFHPL---LIHGSGQNKTQGFRKAISC 250 (308)
T ss_dssp GGSCCCCCCC-----------CCCCC-CCCSCCEEECBCTTCEEEECTT---CCEEECCBCSSSCEEEEEE
T ss_pred CCCccccccccccccCccccccCCccccccCCeEEccCCCccEEEECCC---ccccCCCCCCCCceEEEEE
Confidence 111100 00111110 0100 0 011235677789999999764 9999999876 45777654
No 8
>2fct_A Syringomycin biosynthesis enzyme 2; mononuclear iron, cupin, halogenase, biosynthetic protein; HET: DSU AKG; 1.60A {Pseudomonas syringae PV} SCOP: b.82.2.9 PDB: 2fcu_A* 2fcv_A*
Probab=97.98 E-value=3.1e-05 Score=68.39 Aligned_cols=31 Identities=10% Similarity=0.124 Sum_probs=26.2
Q ss_pred eeeeecCCCEEEEcCCCCHHHHHHHHHHHHh
Q 025868 42 RVSRLKDTDLFTVQNFFTSAESKGFVKAAEA 72 (247)
Q Consensus 42 ~v~~~~~~~i~vi~~fLs~~EC~~Li~~~e~ 72 (247)
+++.+...+++++++||++++|+.|.+.+..
T Consensus 14 ~~~~f~~dGyvvl~~~l~~e~v~~l~~~~~~ 44 (313)
T 2fct_A 14 QRASFEKNGFIGPFDAYSPEEMKETWKRTRL 44 (313)
T ss_dssp HHHHHHHHSEEEEEESSCHHHHHHHHHHHHH
T ss_pred HHHHHHhCCEEECCCCCCHHHHHHHHHHHHH
Confidence 3456678899999999999999999977754
No 9
>2opw_A Phyhd1 protein; double-stranded beta helix, oxygenase, structural GE structural genomics consortium, SGC, oxidoreductase; 1.90A {Homo sapiens} PDB: 3obz_A*
Probab=97.84 E-value=2.7e-05 Score=68.07 Aligned_cols=31 Identities=6% Similarity=0.346 Sum_probs=26.9
Q ss_pred eeeeecCCCEEEEcCCCCHHHHHHHHHHHHh
Q 025868 42 RVSRLKDTDLFTVQNFFTSAESKGFVKAAEA 72 (247)
Q Consensus 42 ~v~~~~~~~i~vi~~fLs~~EC~~Li~~~e~ 72 (247)
+++.+...+++++++||++++|+.|.+.++.
T Consensus 8 ~~~~f~~dGyvvl~~~l~~e~v~~l~~~~~~ 38 (291)
T 2opw_A 8 QLQKFQQDGFLVLEGFLSAEECVAMQQRIGE 38 (291)
T ss_dssp HHHHHHHHSEEEETTSSCHHHHHHHHHHHHH
T ss_pred HHHHHHhCCEEEecCCCCHHHHHHHHHHHHH
Confidence 3456677899999999999999999998876
No 10
>3emr_A ECTD; double stranded beta helix, oxidoreductase; HET: MSE; 1.85A {Virgibacillus salexigens}
Probab=97.83 E-value=4e-06 Score=74.90 Aligned_cols=33 Identities=18% Similarity=0.358 Sum_probs=27.9
Q ss_pred ceeeeecCCCEEEEcCCCCHHHHHHHHHHHHhC
Q 025868 41 LRVSRLKDTDLFTVQNFFTSAESKGFVKAAEAM 73 (247)
Q Consensus 41 l~v~~~~~~~i~vi~~fLs~~EC~~Li~~~e~~ 73 (247)
-+++.+...+++++++|||++||+.|.+.++..
T Consensus 38 eqi~~f~~dGyvvi~~~ls~eev~~lr~~i~~~ 70 (310)
T 3emr_A 38 EQLDSYEKNGFLQIKNFFSEDEVIDMQKAIFEL 70 (310)
T ss_dssp HHHHHHHHHSEEEETTCSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCEEEccCCCCHHHHHHHHHHHHHH
Confidence 345566788999999999999999999988763
No 11
>3gja_A CYTC3; halogenase, beta barrel, biosynthetic protein; 2.20A {Streptomyces} PDB: 3gjb_A*
Probab=97.71 E-value=8.2e-05 Score=66.53 Aligned_cols=194 Identities=13% Similarity=0.120 Sum_probs=90.6
Q ss_pred eeeeecCCCEEEEcCCCCHHHHHHHHHHHHhCCcee-cc-CCCCccCCceeecceEEecCHHHHHHHHHHhhhhhhhhhh
Q 025868 42 RVSRLKDTDLFTVQNFFTSAESKGFVKAAEAMGFVH-QG-SLGPLKGEAYRDNDRISVNDPVLAETVWESGLSKLFTDIK 119 (247)
Q Consensus 42 ~v~~~~~~~i~vi~~fLs~~EC~~Li~~~e~~~~~~-~~-~~~~~~~~~~R~~~~~~~~~~~~~~~l~~ri~~~~~~~~~ 119 (247)
+++.+...++++++++|+++||++|.+.++.. +.. .. ......+...|.....+..++.+.+.+....+..++..
T Consensus 16 q~~~f~~~Gyv~i~~~l~~~~v~~l~~~i~~~-l~~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~l~~~p~l~~~~~~-- 92 (319)
T 3gja_A 16 EVARFERDGYIGPVKIFEPEEMTRRWNIIRRQ-LLDRSLAIYPDSNGKANISNYDRHLDIDLLAEHIMRPEIVDRVGS-- 92 (319)
T ss_dssp HHHHHHHHSEEEEEESSCHHHHHHHHHHHHHH-HHCCTTCSSCSCSSHHHHTTTTGGGTCHHHHHHHHCHHHHHHHHH--
T ss_pred HHHHHHHCCEEECcCCCCHHHHHHHHHHHHHH-hhcCccccccCCCccchhhhhhhcccCHHHHHHHcChHHHHHHHH--
Confidence 45566778999999999999999999888762 111 00 00000011122221122234444443332212222221
Q ss_pred hhcccccccCCceEEEecCCCCcccccccCCccCCCC---------c---e--eEEEEEEEecCcccccc--ccccCCCC
Q 025868 120 IRGKLAVGLNPNIRFYRYKVGQRFGQHIDESVNLGDG---------K---R--THYTLLIYLSGGLKAKA--KNDLSIHN 183 (247)
Q Consensus 120 ~~~~~~~~l~e~~q~~rY~~G~~f~~H~D~~~~~~~~---------~---~--r~~T~llYLN~~~~~~~--~~~~~~~~ 183 (247)
+.|..+. +....-+.+...++...+|.|..+...++ . . +.+|+.++|.+....+- .-.-++++
T Consensus 93 llG~~~~-~~~s~~~~k~Pg~~~~~wHqD~~y~~~~g~p~~~~P~~~~~p~~~~~v~~wiaL~d~t~enG~l~vvPGSH~ 171 (319)
T 3gja_A 93 LIGRNLL-CWRSEFFPKYQGDEGTDWHQAATFAHATGKPQIIWPSDEGRPAFIGTITVWTAFTHSTEQNGCLQLMPGTHT 171 (319)
T ss_dssp HHCSSEE-EEEEEEEEECTTCCCEEEEEECCBCTTTCCBSEECCCCSSSCEECCCEEEEEESSCBCTTTTCEEECSCC--
T ss_pred HcCCceE-EeeeeEeecCCCCCCCCcccCCcccccCCCccccCccccccccccceEEEEEEeccCCCcCcCEEEEeCCcc
Confidence 1221111 11111234554334488999976532221 0 0 24899999997643321 00011222
Q ss_pred CCC----------C----CCCcCcc-eEEecC-------------CCceeeEEecCCCcEEEEecCCCCCcccccccc--
Q 025868 184 DSS----------P----EPLVGGE-TVFYGS-------------RNKLLAEVAPIEGMALIHIHGDKCMLHEARNVI-- 233 (247)
Q Consensus 184 ~~~----------~----d~~eGGe-T~F~~~-------------~~~~~~~V~P~~G~aviF~~~d~~~lH~g~PV~-- 233 (247)
... + +...+|. ..|... +....+.+.-++|++|||... ++|++.|-.
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~f~~~d~~~l~~~~~~~~~~~~~v~~~~~aGd~v~f~~~---~~H~s~~N~~t 248 (319)
T 3gja_A 172 SMNYDESKGMDYDADAINQREKDGIKRGFFGYDYRSLQKDPDWKPDESQAYPMVLKPGEAVIFWSN---TMHASLPHTGS 248 (319)
T ss_dssp -CEECCC------------------------------------------CCBCCBCTTEEEEEETT---SCEEECCCCSC
T ss_pred CcccCcccccccCchhhhhhccccccccccccchhhhccccccccccCceeEeeECCCeEEEEcCC---ccccCCCCCCC
Confidence 110 0 0011221 111100 011224455678999999765 999999998
Q ss_pred cc-cEEEEEE
Q 025868 234 KG-VKYIFRS 242 (247)
Q Consensus 234 ~G-~Kyiirt 242 (247)
+. .|+++..
T Consensus 249 s~~~R~a~~~ 258 (319)
T 3gja_A 249 KTDYRMGFAA 258 (319)
T ss_dssp TTCCEEEEEE
T ss_pred CCCcEEEEEE
Confidence 54 4766543
No 12
>2rdq_A 1-deoxypentalenic acid 11-beta hydroxylase; Fe(II ketoglutarate dependent hydroxylase...; double stranded barrel helix, dioxygenase; HET: AKG; 1.31A {Streptomyces avermitilis} PDB: 2rdn_A* 2rdr_A* 2rds_A*
Probab=97.59 E-value=0.00027 Score=61.43 Aligned_cols=30 Identities=10% Similarity=0.086 Sum_probs=27.1
Q ss_pred eeeecCCCEEEEcCCCCHHHHHHHHHHHHh
Q 025868 43 VSRLKDTDLFTVQNFFTSAESKGFVKAAEA 72 (247)
Q Consensus 43 v~~~~~~~i~vi~~fLs~~EC~~Li~~~e~ 72 (247)
++.+...+++++++||++++|+.|.+.++.
T Consensus 25 ~~~f~~dGyvvl~~~l~~e~v~~l~~~~~~ 54 (288)
T 2rdq_A 25 DSFYEEHGYLFLRNVLDRDLVKTVAEQMRE 54 (288)
T ss_dssp HHHHHHHSEEEECSCSCHHHHHHHHHHHHH
T ss_pred HHHHHhCCEEEEeCCCCHHHHHHHHHHHHH
Confidence 567778899999999999999999998886
No 13
>3nnf_A CURA; non-HAEM Fe(II)/alpha-ketoglutarate-dependent enzymes, catal cryptic chlorination, biosynthetic protein; HET: AKG; 2.20A {Lyngbya majuscula} PDB: 3nnj_A 3nnl_A* 3nnm_A
Probab=96.41 E-value=0.0091 Score=53.05 Aligned_cols=128 Identities=12% Similarity=0.056 Sum_probs=67.1
Q ss_pred CCCcceeee----ecCCCEEEEcCCCCHHHHHHHHHHHHhCCceeccCCCC------ccCCceeecce-EEecCHHHHHH
Q 025868 37 PKQDLRVSR----LKDTDLFTVQNFFTSAESKGFVKAAEAMGFVHQGSLGP------LKGEAYRDNDR-ISVNDPVLAET 105 (247)
Q Consensus 37 p~~~l~v~~----~~~~~i~vi~~fLs~~EC~~Li~~~e~~~~~~~~~~~~------~~~~~~R~~~~-~~~~~~~~~~~ 105 (247)
|-..-+|++ +...+.++++||+|++|.+.|.+.++...-... ..+. .....+|+... ...-.-.+...
T Consensus 24 ~l~~~qve~~~~~fE~eGYLvlk~vFs~eEv~~l~~el~~~~~d~~-~~k~~~~i~~~~s~~lrs~~H~~~~f~~h~~s~ 102 (344)
T 3nnf_A 24 AMNREQVEQLKQEYEEKGYCQIKKIFDFSAIKTIQKTLDQAKQESQ-ISKEKVTLKLGGIDDIDTNDHAYDLVKYDFVSS 102 (344)
T ss_dssp -CCSHHHHHHHHHHHHHSEEEETTCSCHHHHHHHHHHHHHHHHHCC-CCSHHHHHHTTSCCCCBCSEEEECSSCHHHHHH
T ss_pred cCCHHHHHHHHhhhccCceEEEcCCCCHHHHHHHHHHHHHHhhchh-hhcccceecCCCccchhcccccchhHHHHHHHH
Confidence 444456777 677899999999999999999999988521111 1110 01233443211 11111223344
Q ss_pred HHHHhhhhhhhhhhhhcccccccCCceEEEecCCCC-cccccccCCccCCC-CceeEEEEEEEecCc
Q 025868 106 VWESGLSKLFTDIKIRGKLAVGLNPNIRFYRYKVGQ-RFGQHIDESVNLGD-GKRTHYTLLIYLSGG 170 (247)
Q Consensus 106 l~~ri~~~~~~~~~~~~~~~~~l~e~~q~~rY~~G~-~f~~H~D~~~~~~~-~~~r~~T~llYLN~~ 170 (247)
+..|++. ++.. +.|.... .-.-++..+.||+ .|.||.|..+.... ...+-+|+-+-|.+.
T Consensus 103 l~~rll~-vl~~--LlG~el~--i~qs~~fe~kPG~KGFpWH~D~~~F~~~~~eD~a~S~WIpLd~i 164 (344)
T 3nnf_A 103 FIQEKLA-LLNY--ITGKNLM--IMHNALFSVEPNHKGLPWHVGVGSFSFTKTEDFGASIWIPLDKI 164 (344)
T ss_dssp HHGGGHH-HHHH--HHTSCEE--EEEEEEEEECBTCCBSCSBCTTTTTTTBCTTSCEEEEEEESSCB
T ss_pred HHHHHHH-HHHH--HhCCcee--eeecceEeeCCCCCCCCceecccccccccCCCCeEEEEEECCCC
Confidence 5555432 2211 1222110 0113456677775 69999995421110 123557888888854
No 14
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=95.39 E-value=0.21 Score=42.52 Aligned_cols=27 Identities=7% Similarity=0.084 Sum_probs=22.9
Q ss_pred CEEEEcCCCCHHHHHHHHHHHH-hCCce
Q 025868 50 DLFTVQNFFTSAESKGFVKAAE-AMGFV 76 (247)
Q Consensus 50 ~i~vi~~fLs~~EC~~Li~~~e-~~~~~ 76 (247)
.+.++++||+++|.+.|++... +..|.
T Consensus 41 gl~~~~~fl~~~e~~~Ll~~l~~~~~w~ 68 (238)
T 2iuw_A 41 RVCLYPGFVDVKEADWILEQLCQDVPWK 68 (238)
T ss_dssp EEEEETTSSCHHHHHHHHHHHHHHSCCB
T ss_pred cEEEECCCCCHHHHHHHHHHHHHhCCCc
Confidence 6899999999999999999884 45554
No 15
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=95.06 E-value=0.037 Score=49.97 Aligned_cols=76 Identities=18% Similarity=0.176 Sum_probs=45.4
Q ss_pred ceEEEecCCCCcccccccCCccCCCCceeEEEEEEEecCccccccccccCCCCCCCCCCCcCcceEEecCC-CceeeEEe
Q 025868 131 NIRFYRYKVGQRFGQHIDESVNLGDGKRTHYTLLIYLSGGLKAKAKNDLSIHNDSSPEPLVGGETVFYGSR-NKLLAEVA 209 (247)
Q Consensus 131 ~~q~~rY~~G~~f~~H~D~~~~~~~~~~r~~T~llYLN~~~~~~~~~~~~~~~~~~~d~~eGGeT~F~~~~-~~~~~~V~ 209 (247)
...++.|.+|+...+|.|..... + ..++-|| -|+...|.... .+..+.|.
T Consensus 199 ~~lvN~Y~~G~~I~~H~D~~~~~--~-----~~I~slS----------------------LG~~~~f~f~~~~~~~~~l~ 249 (345)
T 3tht_A 199 QMTINQYEPGQGIPAHIDTHSAF--E-----DEIVSLS----------------------LGSEIVMDFKHPDGIAVPVM 249 (345)
T ss_dssp EEEEEEECTTCCEEEECCCTTTB--C-----SCEEEEE----------------------ESSCEEEEEECTTSCEEEEE
T ss_pred EEEEEEecCCCCEeeccCCchhc--C-----CeEEEEE----------------------CCCceeEEEccCCCceEEEE
Confidence 46688999999999999996421 1 1222333 33333443211 11235777
Q ss_pred cCCCcEEEEecCC-CCCcccccccccc
Q 025868 210 PIEGMALIHIHGD-KCMLHEARNVIKG 235 (247)
Q Consensus 210 P~~G~aviF~~~d-~~~lH~g~PV~~G 235 (247)
...|+++|+.... ..+.|++.+...+
T Consensus 250 L~~gsLlvM~G~~r~~w~H~I~~~~~d 276 (345)
T 3tht_A 250 LPRRSLLVMTGESRYLWTHGITCRKFD 276 (345)
T ss_dssp ECTTEEEEECTHHHHTSEEEECCCSEE
T ss_pred cCCCcEEEEChHHhhceEccCCcccCC
Confidence 7899999996421 1355777666544
No 16
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=93.26 E-value=0.58 Score=38.80 Aligned_cols=26 Identities=12% Similarity=0.139 Sum_probs=21.2
Q ss_pred CEEEEcCCCCHHHHHHHHHHH-HhCCc
Q 025868 50 DLFTVQNFFTSAESKGFVKAA-EAMGF 75 (247)
Q Consensus 50 ~i~vi~~fLs~~EC~~Li~~~-e~~~~ 75 (247)
-.+.+++||+++|+++|.+.. ++..|
T Consensus 11 ~~~~~~~~l~~~~a~~l~~~l~~~~~w 37 (204)
T 3s57_A 11 LDSSYTVLFGKAEADEIFQELEKEVEY 37 (204)
T ss_dssp EEEEEEECSCHHHHHHHHHHHHHHCCC
T ss_pred ceEEecCcCCHHHHHHHHHHHHHhCCC
Confidence 467799999999999999876 44566
No 17
>3pl0_A Uncharacterized protein; quorum sensing, biofilm formation, double-stranded beta-HELI structural genomics; HET: MSE; 1.91A {Methylibium petroleiphilum}
Probab=88.64 E-value=0.4 Score=41.42 Aligned_cols=43 Identities=16% Similarity=0.213 Sum_probs=33.6
Q ss_pred CcCcceEEecCCCceeeEEec-CCCcEEEEecCCCCCccccccccc
Q 025868 190 LVGGETVFYGSRNKLLAEVAP-IEGMALIHIHGDKCMLHEARNVIK 234 (247)
Q Consensus 190 ~eGGeT~F~~~~~~~~~~V~P-~~G~aviF~~~d~~~lH~g~PV~~ 234 (247)
-.||+|.++..+++....++- ..|.++++.. .+++|.+.||..
T Consensus 183 i~GGet~I~~~~~~~~~~~~l~~p~d~llv~D--~~~~H~vTpI~~ 226 (254)
T 3pl0_A 183 VRGGETRVFDAAGPQGVRFTLEQPWTVLLLDD--QQVIHESTPLLP 226 (254)
T ss_dssp EEECCEEEEETTSSEEEEECCCSTTCEEEEET--TTEEEEECCEEE
T ss_pred cccceEEEEcCCCCccceeEecCCCcEEEEeC--CcccCCCCcccc
Confidence 479999999876655555544 6899999963 468999999985
No 18
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=88.00 E-value=1.6 Score=36.37 Aligned_cols=77 Identities=18% Similarity=0.202 Sum_probs=46.9
Q ss_pred ceEEEecCCCCcccccccCCccCCCCceeEEEEEEEecCccccccccccCCCCCCCCCCCcCcceEEecC---CCceeeE
Q 025868 131 NIRFYRYKVGQRFGQHIDESVNLGDGKRTHYTLLIYLSGGLKAKAKNDLSIHNDSSPEPLVGGETVFYGS---RNKLLAE 207 (247)
Q Consensus 131 ~~q~~rY~~G~~f~~H~D~~~~~~~~~~r~~T~llYLN~~~~~~~~~~~~~~~~~~~d~~eGGeT~F~~~---~~~~~~~ 207 (247)
..-++.|.+|+.-.+|.|..... .+ ..++|+ | -|++..|.-. ..+....
T Consensus 106 ~~LvN~Y~~G~~i~~H~D~~e~~-~~-~pI~sv----S----------------------LG~~~~f~f~~~~~~~~~~~ 157 (211)
T 3i3q_A 106 ACLINRYAPGAKLSLHQDKDEPD-LR-APIVSV----S----------------------LGLPAIFQFGGLKRNDPLKR 157 (211)
T ss_dssp EEEEEEECTTCCEEEECCCCCSC-TT-SCEEEE----E----------------------EESCEEEEECCSSTTSCCEE
T ss_pred EEEEEEEcCCCCcccccCCCccc-cC-CCEEEE----E----------------------CCCCeEEEEecccCCCceEE
Confidence 45688999999999999952211 11 123333 2 2233333221 1122367
Q ss_pred EecCCCcEEEEecCCCCCcccccccccc
Q 025868 208 VAPIEGMALIHIHGDKCMLHEARNVIKG 235 (247)
Q Consensus 208 V~P~~G~aviF~~~d~~~lH~g~PV~~G 235 (247)
|....|++||+........|++.++..+
T Consensus 158 i~L~~GsllvM~G~~r~~~H~I~~~~~~ 185 (211)
T 3i3q_A 158 LLLEHGDVVVWGGESRLFYHGIQPLKAG 185 (211)
T ss_dssp EEECTTCEEEECGGGTTCCEEECCCCCC
T ss_pred EECCCCCEEEECchHHceEeccCcccCC
Confidence 8888999999975433468999998863
No 19
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=86.73 E-value=3.8 Score=35.87 Aligned_cols=81 Identities=17% Similarity=0.122 Sum_probs=52.7
Q ss_pred CCceEEEecCCC---------C-cccccccCCccCCCCceeEEEEEEEecCccccccccccCCCCCCCCCCCcCc--ceE
Q 025868 129 NPNIRFYRYKVG---------Q-RFGQHIDESVNLGDGKRTHYTLLIYLSGGLKAKAKNDLSIHNDSSPEPLVGG--ETV 196 (247)
Q Consensus 129 ~e~~q~~rY~~G---------~-~f~~H~D~~~~~~~~~~r~~T~llYLN~~~~~~~~~~~~~~~~~~~d~~eGG--eT~ 196 (247)
...+|+++|.+- + ...+|+|.. .+|+|+-=+ ..|| .+.
T Consensus 156 ~~~lrl~~YPp~~~~~~~~~~~~g~~~HtD~g---------~lTlL~qd~---------------------~v~G~~~Lq 205 (311)
T 1dcs_A 156 EPLLRFRYFPQVPEHRSAEEQPLRMAPHYDLS---------MVTLIQQTP---------------------CANGFVSLQ 205 (311)
T ss_dssp CCEEEEEEECC-----------CCEEEEEECS---------SEEEEEEEC---------------------CTTCCCCEE
T ss_pred chhhheecCCCCCcccccCccccccccccCCC---------eEEEEecCC---------------------CCCCceeEE
Confidence 446899999742 1 167899986 378886421 2344 266
Q ss_pred EecCCCceeeEEecCCCcEEEEec-------C--CCCCcccccccc-----cccEEEEE
Q 025868 197 FYGSRNKLLAEVAPIEGMALIHIH-------G--DKCMLHEARNVI-----KGVKYIFR 241 (247)
Q Consensus 197 F~~~~~~~~~~V~P~~G~aviF~~-------~--d~~~lH~g~PV~-----~G~Kyiir 241 (247)
+.. .+.-+.|.|.+|.+||--. + .+..+|+|.... ...||.+-
T Consensus 206 V~~--~g~W~~V~p~pg~lvVNiGD~l~~~TnG~~kS~~HRVv~~~~~~~~~~~R~Si~ 262 (311)
T 1dcs_A 206 AEV--GGAFTDLPYRPDAVLVFCGAIATLVTGGQVKAPRHHVAAPRRDQIAGSSRTSSV 262 (311)
T ss_dssp EEE--TTEEEECCCCTTCEEEEECHHHHHHTTSCSCCCCEEECCC----CTTCCEEEEE
T ss_pred EEe--CCEEEeCcCCCCeEEEEHHHHHHHHhCCcccCCCceEeCCCcccCCCCCeEEEE
Confidence 654 2457889999999988742 1 156899997655 44688764
No 20
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=80.08 E-value=4.7 Score=35.46 Aligned_cols=78 Identities=17% Similarity=0.261 Sum_probs=52.1
Q ss_pred ceEEEecCCCC------cccccccCCccCCCCceeEEEEEEEecCccccccccccCCCCCCCCCCCcCcceEEecCCCce
Q 025868 131 NIRFYRYKVGQ------RFGQHIDESVNLGDGKRTHYTLLIYLSGGLKAKAKNDLSIHNDSSPEPLVGGETVFYGSRNKL 204 (247)
Q Consensus 131 ~~q~~rY~~G~------~f~~H~D~~~~~~~~~~r~~T~llYLN~~~~~~~~~~~~~~~~~~~d~~eGGeT~F~~~~~~~ 204 (247)
.+|+++|.+-. -..+|.|.+ .+|+|+.= +..|| +.+.. .+.
T Consensus 156 ~lrl~~YPp~~~~~~~~g~~~HtD~g---------~lTlL~qd---------------------~~v~G-LQV~~--~g~ 202 (319)
T 1w9y_A 156 GTKVSNYPPCPKPDLIKGLRAHTDAG---------GIILLFQD---------------------DKVSG-LQLLK--DGQ 202 (319)
T ss_dssp EEEEEECCCCSCGGGGSSCCCBCCSS---------SEEEEEES---------------------SSCCC-EEEEE--TTE
T ss_pred eeEEEecCCCcccccccccccccCCC---------ceEEEEec---------------------CCCCe-eeEee--CCe
Confidence 48999998532 357888885 37888532 22344 44432 235
Q ss_pred eeEEecCCCcEEEEec--------C-CCCCcccccccccccEEEEE
Q 025868 205 LAEVAPIEGMALIHIH--------G-DKCMLHEARNVIKGVKYIFR 241 (247)
Q Consensus 205 ~~~V~P~~G~aviF~~--------~-d~~~lH~g~PV~~G~Kyiir 241 (247)
-+.|.|.+|..||--. + .+..+|+|.....+.||.+-
T Consensus 203 Wi~V~p~pgalvVNiGD~l~~~SnG~~kS~~HRVv~~~~~~R~Sia 248 (319)
T 1w9y_A 203 WIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQKDGARMSLA 248 (319)
T ss_dssp EEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSSCCEEEE
T ss_pred EEEcccCCCcEEEEhHHHHHHHhCCeeecccceecCCCCCCceEEE
Confidence 7889999999988742 1 15689999876666788763
No 21
>3rcq_A Aspartyl/asparaginyl beta-hydroxylase; structural genomics, structural genomics consortium, SGC, oxidoreductase, human; HET: OGA; 2.05A {Homo sapiens}
Probab=77.96 E-value=13 Score=30.48 Aligned_cols=80 Identities=19% Similarity=0.167 Sum_probs=56.7
Q ss_pred ceEEEecCCCCcccccccCCccCCCCceeEEEEEEEecCccccccccccCCCCCCCCCCCcCcceEEecCCCceeeEEec
Q 025868 131 NIRFYRYKVGQRFGQHIDESVNLGDGKRTHYTLLIYLSGGLKAKAKNDLSIHNDSSPEPLVGGETVFYGSRNKLLAEVAP 210 (247)
Q Consensus 131 ~~q~~rY~~G~~f~~H~D~~~~~~~~~~r~~T~llYLN~~~~~~~~~~~~~~~~~~~d~~eGGeT~F~~~~~~~~~~V~P 210 (247)
...|.+-.+|.+-.+|+|... -.+++.|=|--+ + +|-. |.-.+ ....=
T Consensus 103 ~a~fs~L~pG~~I~pH~g~~n-------~~lR~HL~L~~p-----------------~--~~~~--i~V~~----~~~~w 150 (197)
T 3rcq_A 103 QIKYSIMHPGTHVWPHTGPTN-------CRLRMHLGLVIP-----------------K--EGCK--IRCAN----ETKTW 150 (197)
T ss_dssp EEEEEEECTTEEEEEECCSCT-------TEEEEEEEEECC-----------------S--SSEE--EEETT----EEECC
T ss_pred eEEEEEeCCCCCcCCeeCCCC-------CeEEEEEEEEeC-----------------C--CCcE--EEECC----EEEEe
Confidence 467889999999999999742 146788878721 1 2222 22111 23334
Q ss_pred CCCcEEEEecCCCCCcccccccccccEEEEEEeee
Q 025868 211 IEGMALIHIHGDKCMLHEARNVIKGVKYIFRSDVV 245 (247)
Q Consensus 211 ~~G~aviF~~~d~~~lH~g~PV~~G~Kyiirtdv~ 245 (247)
+.|.+++|... ..|++---..+.|+++--|+.
T Consensus 151 ~eGe~~~fDds---~~Hev~N~~d~~RvvL~~D~~ 182 (197)
T 3rcq_A 151 EEGKVLIFDDS---FEHEVWQDASSFRLIFIVDVW 182 (197)
T ss_dssp CBTCEEEECTT---SCEEEEECSSSCEEEEEEEEE
T ss_pred eCCcEEEEcCC---eEEEEEECCCCCEEEEEEeee
Confidence 68999999765 899999888899999998874
No 22
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=74.15 E-value=14 Score=32.52 Aligned_cols=77 Identities=19% Similarity=0.149 Sum_probs=50.1
Q ss_pred CceE--EEecC------C-------CC---cccccccCCccCCCCceeEEEEEEEecCccccccccccCCCCCCCCCCCc
Q 025868 130 PNIR--FYRYK------V-------GQ---RFGQHIDESVNLGDGKRTHYTLLIYLSGGLKAKAKNDLSIHNDSSPEPLV 191 (247)
Q Consensus 130 e~~q--~~rY~------~-------G~---~f~~H~D~~~~~~~~~~r~~T~llYLN~~~~~~~~~~~~~~~~~~~d~~e 191 (247)
..+| +++|. + .. -..+|.|.+ .+|+|+- + . .
T Consensus 180 ~~lr~~l~~YP~~~~~~p~~~~~~~~~~~~g~~~HtD~g---------~lTlL~q-d--------------------~-v 228 (331)
T 1odm_A 180 TLASVVLIRYPYLDPYPEAAIKTAADGTKLSFEWHEDVS---------LITVLYQ-S--------------------N-V 228 (331)
T ss_dssp CCCEEEEEEECCCSSCCGGGCEECTTSCEEEEEEECCSS---------SEEEEEE-C--------------------S-S
T ss_pred HHHHHHHhhCCCcccccccccCCCccccccccccccCCC---------eEEEEee-C--------------------C-C
Confidence 3588 99998 5 11 257899885 3788753 2 2 3
Q ss_pred CcceEEecCCCceeeEEecCCCcEEEEec-------C--CCCCcccccccccccEEEEE
Q 025868 192 GGETVFYGSRNKLLAEVAPIEGMALIHIH-------G--DKCMLHEARNVIKGVKYIFR 241 (247)
Q Consensus 192 GGeT~F~~~~~~~~~~V~P~~G~aviF~~-------~--d~~~lH~g~PV~~G~Kyiir 241 (247)
|.+.+...+ + .+.|.|.+|.+||--. + .+...|+|... ...||.+-
T Consensus 229 -~GLQV~~~~-g-Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~-~~~R~Sia 283 (331)
T 1odm_A 229 -QNLQVETAA-G-YQDIEADDTGYLINCGSYMAHLTNNYYKAPIHRVKWV-NAERQSLP 283 (331)
T ss_dssp -CCEEEEETT-E-EEECCCCTTSEEEEECHHHHHHTTTSSCCCCEEEECC-CSCEEEEE
T ss_pred -CCEEEEcCC-C-eEECCCCCCeEEEEccHHHHHHhCCEeeCCCceeCCC-CCCEEEEE
Confidence 345555333 3 7889999999988742 1 15689999642 44688764
No 23
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=69.23 E-value=14 Score=31.59 Aligned_cols=78 Identities=17% Similarity=0.062 Sum_probs=49.8
Q ss_pred CceEEEecCCCC--------cccccccCCccCCCCceeEEEEEEEecCccccccccccCCCCCCCCCCCcCcceEEecCC
Q 025868 130 PNIRFYRYKVGQ--------RFGQHIDESVNLGDGKRTHYTLLIYLSGGLKAKAKNDLSIHNDSSPEPLVGGETVFYGSR 201 (247)
Q Consensus 130 e~~q~~rY~~G~--------~f~~H~D~~~~~~~~~~r~~T~llYLN~~~~~~~~~~~~~~~~~~~d~~eGGeT~F~~~~ 201 (247)
..+|+++|.+-. ...+|+|.. .+|+|+ . | ..| .+.+...+
T Consensus 150 ~~lr~~~YP~~~~~~~~~~~g~~~HtD~g---------~lTlL~--q-------------------d-~~~-GLqV~~~~ 197 (280)
T 3on7_A 150 TLLRILHYPPMTGDEEMGAIRAAAHEDIN---------LITVLP--T-------------------A-NEP-GLQVKAKD 197 (280)
T ss_dssp CEEEEEEECCCCTTCCCCSEEEEEECCCS---------SEEEEE--C-------------------C-SCC-CEEEECTT
T ss_pred ceEEEEECCCCCCccccCcccccCCCCCC---------eEEEEE--e-------------------c-CCC-CeEEEcCC
Confidence 358999997431 256899985 378775 3 2 133 35554322
Q ss_pred CceeeEEecCCCcEEEEec-------C--CCCCcccccccc----cccEEEE
Q 025868 202 NKLLAEVAPIEGMALIHIH-------G--DKCMLHEARNVI----KGVKYIF 240 (247)
Q Consensus 202 ~~~~~~V~P~~G~aviF~~-------~--d~~~lH~g~PV~----~G~Kyii 240 (247)
+.-+.|.|.+|.+||--. + .+..+|+|.... ...||.+
T Consensus 198 -g~W~~V~p~pg~~vVNiGD~l~~~Tng~~kS~~HRVv~~~~~~~~~~R~Si 248 (280)
T 3on7_A 198 -GSWLDVPSDFGNIIINIGDMLQEASDGYFPSTSHRVINPEGTDKTKSRISL 248 (280)
T ss_dssp -SCEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEEECCTTCCTTSCEEEC
T ss_pred -CCEEECcCCCCEEEEEcChHHHHHhCCcccCCCceEeCCCCCCCCCCeEEE
Confidence 346889999999998742 1 156899986542 2367765
No 24
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=68.10 E-value=18 Score=32.20 Aligned_cols=77 Identities=18% Similarity=0.235 Sum_probs=51.5
Q ss_pred ceEEEecCCC------CcccccccCCccCCCCceeEEEEEEEecCccccccccccCCCCCCCCCCCcCcceEEecCCCce
Q 025868 131 NIRFYRYKVG------QRFGQHIDESVNLGDGKRTHYTLLIYLSGGLKAKAKNDLSIHNDSSPEPLVGGETVFYGSRNKL 204 (247)
Q Consensus 131 ~~q~~rY~~G------~~f~~H~D~~~~~~~~~~r~~T~llYLN~~~~~~~~~~~~~~~~~~~d~~eGGeT~F~~~~~~~ 204 (247)
.+|+++|.+- --..+|+|.+ .+|+|+- + . .|| +.+.. .+.
T Consensus 211 ~lrl~~YPp~~~~~~~~g~~~HtD~g---------~lTlL~q-d--------------------~-v~G-LQV~~--~g~ 256 (356)
T 1gp6_A 211 QMKINYYPKCPQPELALGVEAHTDVS---------ALTFILH-N--------------------M-VPG-LQLFY--EGK 256 (356)
T ss_dssp EEEEEEECCCSSTTTCCSEEEECCCS---------SEEEEEE-C--------------------S-CCC-EEEEE--TTE
T ss_pred eeeeeecCCCCCcccccCcCCccCCC---------eEEEEEE-c--------------------C-CCC-eEEec--CCc
Confidence 4889999743 1367899986 3788753 2 2 344 44443 235
Q ss_pred eeEEecCCCcEEEEec--------C-CCCCcccccccccccEEEEE
Q 025868 205 LAEVAPIEGMALIHIH--------G-DKCMLHEARNVIKGVKYIFR 241 (247)
Q Consensus 205 ~~~V~P~~G~aviF~~--------~-d~~~lH~g~PV~~G~Kyiir 241 (247)
.+.|.|.+|.+||--. + .+..+|+|.......||.+-
T Consensus 257 Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~~~~~R~Sia 302 (356)
T 1gp6_A 257 WVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWA 302 (356)
T ss_dssp EEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEE
T ss_pred EEECcCCCCeEEEEeccHHHHhcCCEeeccCceecCCCCCCEEEEE
Confidence 7889999999988742 1 15689999765556788764
No 25
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=67.24 E-value=29 Score=30.02 Aligned_cols=78 Identities=23% Similarity=0.284 Sum_probs=49.5
Q ss_pred CceEEEecCCCC------cccccccCCccCCCCceeEEEEEEEecCccccccccccCCCCCCCCCCCcCcceEEecCCCc
Q 025868 130 PNIRFYRYKVGQ------RFGQHIDESVNLGDGKRTHYTLLIYLSGGLKAKAKNDLSIHNDSSPEPLVGGETVFYGSRNK 203 (247)
Q Consensus 130 e~~q~~rY~~G~------~f~~H~D~~~~~~~~~~r~~T~llYLN~~~~~~~~~~~~~~~~~~~d~~eGGeT~F~~~~~~ 203 (247)
..+++++|.+-. -..+|+|.. .+|+|+ . |. .|| +.+...+ +
T Consensus 169 ~~lr~~~Ypp~~~~~~~~g~~~HtD~g---------~lTlL~--q-------------------d~-v~G-LqV~~~~-g 215 (312)
T 3oox_A 169 SVLRLLHYPPIPKDATGVRAGAHGDIN---------TITLLL--G-------------------AE-EGG-LEVLDRD-G 215 (312)
T ss_dssp CEEEEEEECCCSSCCC--CEEEECCCS---------SEEEEE--C-------------------CT-TSC-EEEECTT-S
T ss_pred ceeeeEecCCCCCCcCCcCccceecCc---------eEEEEe--E-------------------cC-cCc-eEEECCC-C
Confidence 358999998531 256899985 378873 4 22 333 5554333 3
Q ss_pred eeeEEecCCCcEEEEec-------CC--CCCcccccccc----cccEEEE
Q 025868 204 LLAEVAPIEGMALIHIH-------GD--KCMLHEARNVI----KGVKYIF 240 (247)
Q Consensus 204 ~~~~V~P~~G~aviF~~-------~d--~~~lH~g~PV~----~G~Kyii 240 (247)
.-+.|.|.+|.+||--. ++ +.++|+|.... ...||.+
T Consensus 216 ~W~~V~p~pg~~vVNiGD~l~~~TnG~~kS~~HRVv~~~~~~~~~~R~Si 265 (312)
T 3oox_A 216 QWLPINPPPGCLVINIGDMLERLTNNVLPSTVHRVVNPPPERRGVPRYST 265 (312)
T ss_dssp CEEECCCCSSCEEEEECHHHHHHTTTSSCCCCEEECCCCGGGTTSCEEEC
T ss_pred cEEECCCCCCeEEEEhHHHHHHHhCCeecCCCceEeCCCccCCCCCEEEE
Confidence 46889999999988742 11 56789986432 2347765
No 26
>1nx8_A CARC, carbapenem synthase; jelly roll, unknown function; HET: AKG N7P; 2.30A {Pectobacterium carotovorum} SCOP: b.82.2.8 PDB: 1nx4_A*
Probab=66.43 E-value=6 Score=33.37 Aligned_cols=39 Identities=18% Similarity=0.167 Sum_probs=32.7
Q ss_pred eeEEecCCCcEEEEecCCCCCccccccccc--ccEEEEEEeee
Q 025868 205 LAEVAPIEGMALIHIHGDKCMLHEARNVIK--GVKYIFRSDVV 245 (247)
Q Consensus 205 ~~~V~P~~G~aviF~~~d~~~lH~g~PV~~--G~Kyiirtdv~ 245 (247)
.+.++=++|++|||.|. +++|+..+-.. +.|+..|..|.
T Consensus 231 ~~~~~w~~GD~~i~DN~--~vlH~R~~f~~~~~~R~l~R~~i~ 271 (273)
T 1nx8_A 231 YYKHFWEDGDLLIMDNR--RVIHEREEFNDDDIVRRLYRGQTA 271 (273)
T ss_dssp EEEECCCTTCEEEEETT--TEEEEECCCCCTTCEEEEEEEEEE
T ss_pred EEEeEecCCCEEEEECC--eeeeccccCCCCCCCeEEEEeecc
Confidence 46777789999999884 79999999874 57999999874
No 27
>3nsw_A Excretory-secretory protein 2; hookworm, excretory-secretory protei merohedral twinning, immunomodulator, netrin domain, immune; HET: EPE; 1.75A {Ancylostoma ceylanicum}
Probab=64.23 E-value=2.5 Score=29.89 Aligned_cols=47 Identities=15% Similarity=0.290 Sum_probs=26.7
Q ss_pred ccccccCCCCCCCCC-CCCCCC----CCcceee---ee-----c--CCCEEEEcCCCCHHHHHHH
Q 025868 17 RREADAKKSTTTTSN-WPIIKP----KQDLRVS---RL-----K--DTDLFTVQNFFTSAESKGF 66 (247)
Q Consensus 17 ~~~~~~~~~~~~~~~-~p~~~p----~~~l~v~---~~-----~--~~~i~vi~~fLs~~EC~~L 66 (247)
-|-||++| |+|| ||.|-- -.++++. .+ . .+-.+-+++=||..|-+.|
T Consensus 43 wrlydvpk---tapsqwpsfgtlrddcgniqltadtdyvlgcksgnqdcfvklhdglsqkekdll 104 (106)
T 3nsw_A 43 WRLYDVPK---TAPSQWPSFGTLRDDCGNIQLTADTDYVLGCKSGNQDCFVKLHDGLSQKEKDLL 104 (106)
T ss_dssp EEECCCSS---CCCSCCCSEEEEECSSCSCCCCTTEEEEEEEETTTEEEEEEEGGGCCHHHHHHH
T ss_pred EEEecCCC---CCcccCCcccccccccCceEEecccCEEEeecCCCcceEEEeccchhhhHHHHh
Confidence 36789999 6666 998762 1222221 11 1 1244557777787776544
No 28
>2wbq_A L-arginine beta-hydroxylase; oxidoreductase, non-heme Fe(II) hydroxylase, cbeta- hydroxylation, L-arginine oxygenase, NRPS, viomycin; HET: ZZU; 1.10A {Streptomyces vinaceus} PDB: 2wbp_A* 2wbo_A*
Probab=62.88 E-value=6.7 Score=34.69 Aligned_cols=39 Identities=18% Similarity=0.219 Sum_probs=31.8
Q ss_pred eeEEecCCCcEEEEecCCCCCcccccccc---cc-cEEEEEEeee
Q 025868 205 LAEVAPIEGMALIHIHGDKCMLHEARNVI---KG-VKYIFRSDVV 245 (247)
Q Consensus 205 ~~~V~P~~G~aviF~~~d~~~lH~g~PV~---~G-~Kyiirtdv~ 245 (247)
.+.++-++|++|||.|. +++|+..+.. .| .|+..|.+|.
T Consensus 296 ~~~~~w~pGDv~i~DNr--~vlH~R~~f~~~~~~~~R~L~R~~i~ 338 (358)
T 2wbq_A 296 LYELVLDQGDVAFIDNR--RAVHGRRAFQPRYDGRDRWLKRINIT 338 (358)
T ss_dssp CEEEECCTTCEEEEETT--TEEEEECCCCCCCSSCCCEEEEEEEE
T ss_pred ceEEeecCCCEEEEeCc--ccccCCCCCCCCCCCCCceEEEEEEe
Confidence 46778889999999884 7999988875 34 6999999874
No 29
>2og5_A Putative oxygenase; non-ribosomal peptide synthesis, iron(II)/alpha-ketoglutarat dependent hydroxylase, jelly-roll fold; 1.45A {Streptomyces coelicolor} PDB: 2og6_A 2og7_A*
Probab=61.44 E-value=7.1 Score=34.63 Aligned_cols=39 Identities=13% Similarity=0.106 Sum_probs=32.1
Q ss_pred eeEEecCCCcEEEEecCCCCCccccccccc----ccEEEEEEeee
Q 025868 205 LAEVAPIEGMALIHIHGDKCMLHEARNVIK----GVKYIFRSDVV 245 (247)
Q Consensus 205 ~~~V~P~~G~aviF~~~d~~~lH~g~PV~~----G~Kyiirtdv~ 245 (247)
.+.++-++|++|||.|. +++|+..+... +.|+..|.+|.
T Consensus 291 ~~~~~w~pGDivi~DN~--~vlH~R~~f~d~~~~~~R~L~R~~i~ 333 (357)
T 2og5_A 291 AVTHRLLPGELAIVDNR--VTVHGRTEFTPRYDGTDRWLQRTFVL 333 (357)
T ss_dssp CEEECCCTTCEEEEETT--TEEEEECCCCCCCSSCSCEEEEEEEE
T ss_pred eEEEeeCCCCEEEEeCC--ccccCCCCCCCCCCCCCcEEEEEEEc
Confidence 46778889999999884 79999988863 47999999874
No 30
>3lwc_A Uncharacterized protein; structural genomics, unknown function, joint center for STRU genomics, JCSG, protein structure initiative; HET: MSE; 1.40A {Rhizobium leguminosarum}
Probab=57.36 E-value=54 Score=24.00 Aligned_cols=23 Identities=17% Similarity=0.072 Sum_probs=17.3
Q ss_pred EEecCCCcEEEEecCCCCCccccccc
Q 025868 207 EVAPIEGMALIHIHGDKCMLHEARNV 232 (247)
Q Consensus 207 ~V~P~~G~aviF~~~d~~~lH~g~PV 232 (247)
.+..++|++++|+.+ ..|.-.-.
T Consensus 78 ~~~l~~GD~v~ip~g---~~H~~~~~ 100 (119)
T 3lwc_A 78 TVTAGPGEIVYMPKG---ETVTIRSH 100 (119)
T ss_dssp EEEECTTCEEEECTT---CEEEEEEE
T ss_pred EEEECCCCEEEECCC---CEEEEEcC
Confidence 345568999999987 67876644
No 31
>2ozj_A Cupin 2, conserved barrel; cupin superfamily protein, struct genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Desulfitobacterium hafniense}
Probab=56.54 E-value=44 Score=23.54 Aligned_cols=30 Identities=10% Similarity=0.071 Sum_probs=21.1
Q ss_pred EEecCCCcEEEEecCCCCCcccccccccccEEEE
Q 025868 207 EVAPIEGMALIHIHGDKCMLHEARNVIKGVKYIF 240 (247)
Q Consensus 207 ~V~P~~G~aviF~~~d~~~lH~g~PV~~G~Kyii 240 (247)
.+.-.+|++++++.+ ..|..... .+.+|++
T Consensus 77 ~~~l~~Gd~i~i~~~---~~H~~~~~-~~~~~~~ 106 (114)
T 2ozj_A 77 KIDLVPEDVLMVPAH---KIHAIAGK-GRFKMLQ 106 (114)
T ss_dssp EEEECTTCEEEECTT---CCBEEEEE-EEEEEEE
T ss_pred EEEecCCCEEEECCC---CcEEEEeC-CCcEEEE
Confidence 344568999999987 78987765 3445543
No 32
>1otj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, alpha ketoglutarate-dependent dioxygenase, oxidoreductase; 1.90A {Escherichia coli} SCOP: b.82.2.5 PDB: 1gqw_A* 1os7_A* 1gy9_A
Probab=55.60 E-value=12 Score=31.61 Aligned_cols=39 Identities=10% Similarity=-0.055 Sum_probs=31.8
Q ss_pred eeEEecCCCcEEEEecCCCCCccccccccc-ccEEEEEEeee
Q 025868 205 LAEVAPIEGMALIHIHGDKCMLHEARNVIK-GVKYIFRSDVV 245 (247)
Q Consensus 205 ~~~V~P~~G~aviF~~~d~~~lH~g~PV~~-G~Kyiirtdv~ 245 (247)
.+.++=++|++|||.|. +++|+..+-.. +.|+..|..|.
T Consensus 235 ~~~~~w~~GDv~i~DN~--~~lH~r~~f~~~~~R~l~R~~i~ 274 (283)
T 1otj_A 235 QVRWRWQPNDIAIWDNR--VTQHYANADYLPQRRIMHRATIL 274 (283)
T ss_dssp EEEECCCTTCEEEEETT--SEEEEECCCCTTSCEEEEEEEEE
T ss_pred EEEeeEcCCCEEEEECc--ceeecccCCCCCCceEEEEEEEe
Confidence 45677789999999884 79999999764 57999998773
No 33
>1ds1_A Clavaminate synthase 1; oxygenase, trifunctional enzyme, oxidoreductase,lyase; HET: AKG; 1.08A {Streptomyces clavuligerus} SCOP: b.82.2.2 PDB: 1drt_A* 1ds0_A 1dry_A* 1gvg_A*
Probab=55.56 E-value=9.8 Score=33.07 Aligned_cols=39 Identities=18% Similarity=0.071 Sum_probs=31.9
Q ss_pred eeEEecCCCcEEEEecCCCCCccccccccc---c-cEEEEEEeee
Q 025868 205 LAEVAPIEGMALIHIHGDKCMLHEARNVIK---G-VKYIFRSDVV 245 (247)
Q Consensus 205 ~~~V~P~~G~aviF~~~d~~~lH~g~PV~~---G-~Kyiirtdv~ 245 (247)
.+.++-++|++|||.|. +++|+-.+... | .|+..|.+|.
T Consensus 259 ~~~~~w~~GDv~i~DN~--~~lH~R~~f~~~~~~~~R~L~R~~v~ 301 (324)
T 1ds1_A 259 TEAVYLEPGDLLIVDNF--RTTHARTPFSPRWDGKDRWLHRVYIR 301 (324)
T ss_dssp CEEECCCTTCEEEEETT--TEEEEECCCCCCCSSCCCEEEEEEEE
T ss_pred cEEEeeCCCCEEEEeCC--ceeecCCccCCCCCCCCcEEEEEEEe
Confidence 46778889999999884 68999888764 3 7999999873
No 34
>3o2g_A Gamma-butyrobetaine dioxygenase; gamma-butyrobetaine hydroxylase, 2-OXOG dioxygenase 1, oxidoreductase, structural genomics; HET: OGA NM2; 1.78A {Homo sapiens} PDB: 3ms5_A* 3n6w_A
Probab=54.67 E-value=10 Score=34.19 Aligned_cols=38 Identities=11% Similarity=-0.047 Sum_probs=32.0
Q ss_pred eeEEecCCCcEEEEecCCCCCccccccccc--c-cEEEEEEee
Q 025868 205 LAEVAPIEGMALIHIHGDKCMLHEARNVIK--G-VKYIFRSDV 244 (247)
Q Consensus 205 ~~~V~P~~G~aviF~~~d~~~lH~g~PV~~--G-~Kyiirtdv 244 (247)
.+.++-++|++|||.|. +++|+...... | .|+..|++|
T Consensus 328 ~~~~~~~pGd~vi~DNr--~~lH~R~~f~~~~~~~R~L~r~yi 368 (388)
T 3o2g_A 328 KFTFKMNPGDVITFDNW--RLLHGRRSYEAGTEISRHLEGAYA 368 (388)
T ss_dssp CEEECCCTTCEEEEETT--TEEEEECCCCCCSSCSCEEEEEEE
T ss_pred EEEEEcCCCcEEEEeCc--EEeeCCCCcCCCCCCCEEEEEEEE
Confidence 36778889999999884 69999998874 4 799999987
No 35
>1otj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, alpha ketoglutarate-dependent dioxygenase, oxidoreductase; 1.90A {Escherichia coli} SCOP: b.82.2.5 PDB: 1gqw_A* 1os7_A* 1gy9_A
Probab=47.86 E-value=17 Score=30.68 Aligned_cols=35 Identities=20% Similarity=0.222 Sum_probs=25.8
Q ss_pred cccccCCccCCCCceeEEEEEEEecCccccccccccCCCCCCCCCCCcCcceEEecC
Q 025868 144 GQHIDESVNLGDGKRTHYTLLIYLSGGLKAKAKNDLSIHNDSSPEPLVGGETVFYGS 200 (247)
Q Consensus 144 ~~H~D~~~~~~~~~~r~~T~llYLN~~~~~~~~~~~~~~~~~~~d~~eGGeT~F~~~ 200 (247)
.+|.|..+... .-.+++|.-+. -+..||+|.|-+.
T Consensus 97 ~wHtD~sy~~~---pp~~~~L~c~~-------------------~p~~GG~T~~~d~ 131 (283)
T 1otj_A 97 NWHTDVTFIET---PPAGAILAAKE-------------------LPSTGGDTLWTSG 131 (283)
T ss_dssp SCBCTTTTSSS---CEEEEEEEEEE-------------------CCSSCCCEEEEEH
T ss_pred CcEeeccCccC---CCceEEEEEEe-------------------cCCCCCcceeeeH
Confidence 59999987542 23467777777 4568999999864
No 36
>1oih_A Putative alkylsulfatase ATSK; non-heme Fe(II) alphaketoglutarate dependent dioxygenase, jelly roll, oxidoreductase; 1.89A {Pseudomonas putida} SCOP: b.82.2.5 PDB: 1oii_A* 1oij_B* 1vz4_A 1vz5_A 1oik_A* 1oij_A* 1oij_C*
Probab=46.20 E-value=20 Score=30.60 Aligned_cols=39 Identities=21% Similarity=0.265 Sum_probs=27.0
Q ss_pred CCcccccccCCccCCCCceeEEEEEEEecCccccccccccCCCCCCCCCCCcCcceEEecC
Q 025868 140 GQRFGQHIDESVNLGDGKRTHYTLLIYLSGGLKAKAKNDLSIHNDSSPEPLVGGETVFYGS 200 (247)
Q Consensus 140 G~~f~~H~D~~~~~~~~~~r~~T~llYLN~~~~~~~~~~~~~~~~~~~d~~eGGeT~F~~~ 200 (247)
+....+|.|..+.... -.+++|.-+. -+..||+|.|-+.
T Consensus 102 ~~~~~wHtD~sy~~~p---P~~~~L~c~~-------------------~p~~GG~T~~ad~ 140 (301)
T 1oih_A 102 QRANSWHTDVTFVEAY---PKASILRSVV-------------------APASGGDTVWANT 140 (301)
T ss_dssp -CCCSCBCTTTTSSSC---CSEEEEEEEE-------------------CCSSCCCEEEEEH
T ss_pred CcCcCCEecccCcCCC---CceEEEEEee-------------------cCCCCCccccccH
Confidence 3456799999986432 2367776777 4568999999753
No 37
>1yhf_A Hypothetical protein SPY1581; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; 2.00A {Streptococcus pyogenes} SCOP: b.82.1.9
Probab=43.92 E-value=79 Score=21.99 Aligned_cols=22 Identities=23% Similarity=0.274 Sum_probs=17.1
Q ss_pred ecCCCcEEEEecCCCCCcccccccc
Q 025868 209 APIEGMALIHIHGDKCMLHEARNVI 233 (247)
Q Consensus 209 ~P~~G~aviF~~~d~~~lH~g~PV~ 233 (247)
.-.+|++++++.+ ..|......
T Consensus 81 ~l~~Gd~~~ip~~---~~H~~~~~~ 102 (115)
T 1yhf_A 81 RVAEGQTIVMPAG---IPHALYAVE 102 (115)
T ss_dssp EEETTCEEEECTT---SCEEEEESS
T ss_pred EECCCCEEEECCC---CCEEEEECC
Confidence 3447999999987 789887654
No 38
>3pvj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, Fe(II) binding, oxidoreductas; 1.85A {Pseudomonas putida KT2440} SCOP: b.82.2.5 PDB: 3v15_A 3v17_A*
Probab=43.86 E-value=21 Score=30.47 Aligned_cols=37 Identities=19% Similarity=0.140 Sum_probs=26.1
Q ss_pred CcccccccCCccCCCCceeEEEEEEEecCccccccccccCCCCCCCCCCCcCcceEEec
Q 025868 141 QRFGQHIDESVNLGDGKRTHYTLLIYLSGGLKAKAKNDLSIHNDSSPEPLVGGETVFYG 199 (247)
Q Consensus 141 ~~f~~H~D~~~~~~~~~~r~~T~llYLN~~~~~~~~~~~~~~~~~~~d~~eGGeT~F~~ 199 (247)
....+|.|..+.... ..+++|.-+. -+..||+|.|-+
T Consensus 92 ~~~~wH~D~sy~~~p---p~~~~l~~~~-------------------~p~~GG~T~~~d 128 (277)
T 3pvj_A 92 DNAVWHTDVTFLPTP---ALGAVLSAKQ-------------------LPAYGGDTLWAS 128 (277)
T ss_dssp GGSSCBCTTTTSSSC---CCEEEEEEEE-------------------CCSSCCCEEEEE
T ss_pred cCCCceeeCCCcCCC---CceEEEEeec-------------------cCCCCCCcEeee
Confidence 456799999876432 2367776666 456899999974
No 39
>3eat_X Pyoverdine biosynthesis protein PVCB; paerucumarin, Fe/alpha-ketoglutarate dependent hydroxylase, 2-isocyano-6,7-dihydroxycoumarin; 2.50A {Pseudomonas aeruginosa}
Probab=43.10 E-value=25 Score=30.14 Aligned_cols=39 Identities=10% Similarity=-0.054 Sum_probs=30.3
Q ss_pred eeEEecCCCcEEEEecCCCCCcccccccccc-cEEEEEEeee
Q 025868 205 LAEVAPIEGMALIHIHGDKCMLHEARNVIKG-VKYIFRSDVV 245 (247)
Q Consensus 205 ~~~V~P~~G~aviF~~~d~~~lH~g~PV~~G-~Kyiirtdv~ 245 (247)
.+..+=++|++|||.|. +++|...+-..+ .|+.-|+.|.
T Consensus 241 ~~~~~w~~GDlviwDNr--~vlH~r~~~~~~~~R~l~R~~i~ 280 (293)
T 3eat_X 241 HYAHRWRSDDLVIADNL--TLLHGREAFAHRAPRHLRRVHIH 280 (293)
T ss_dssp EEEECCCTTCEEEEETT--TEEEEECCBSSCCCEEEEEEEEE
T ss_pred EEEEEcCCCCEEEEeCC--ceEEcccCCCCCCceEEEEEEEc
Confidence 45667789999999884 799999887654 5888887764
No 40
>2q4a_A Clavaminate synthase-like protein AT3G21360; ensemble refinement, refinement methodology development, AT3 structural genomics; 2.39A {Arabidopsis thaliana} SCOP: b.82.2.8 PDB: 1y0z_A
Probab=39.98 E-value=21 Score=30.93 Aligned_cols=40 Identities=23% Similarity=0.118 Sum_probs=27.7
Q ss_pred CCCcccccccCCccCCCCceeEEEEEEEecCccccccccccCCCCCCCCCCCcCcceEEecC
Q 025868 139 VGQRFGQHIDESVNLGDGKRTHYTLLIYLSGGLKAKAKNDLSIHNDSSPEPLVGGETVFYGS 200 (247)
Q Consensus 139 ~G~~f~~H~D~~~~~~~~~~r~~T~llYLN~~~~~~~~~~~~~~~~~~~d~~eGGeT~F~~~ 200 (247)
......+|.|..+.... -.+++|.-+. -+.+||+|.|-+.
T Consensus 113 ~~~~~~~HtD~sy~~~p---P~~~~L~c~~-------------------~p~~GG~T~~ad~ 152 (330)
T 2q4a_A 113 PDQKIPFHHEMAQVREF---PSKLFFYCEI-------------------EPKCGGETPIVLS 152 (330)
T ss_dssp TTSCEEEECTTTTSTTC---CSEEEEEEEE-------------------CCSEECCCCEEEH
T ss_pred CccccccccccCCCCCC---CceEEEECcC-------------------CCCcCCceeeecH
Confidence 34567799999875422 2366776666 4567999999763
No 41
>1nx8_A CARC, carbapenem synthase; jelly roll, unknown function; HET: AKG N7P; 2.30A {Pectobacterium carotovorum} SCOP: b.82.2.8 PDB: 1nx4_A*
Probab=39.80 E-value=16 Score=30.66 Aligned_cols=38 Identities=16% Similarity=0.126 Sum_probs=26.3
Q ss_pred CcccccccCCccCCCCceeEEEEEEEecCccccccccccCCCCCCCCCCC--cCcceEEecC
Q 025868 141 QRFGQHIDESVNLGDGKRTHYTLLIYLSGGLKAKAKNDLSIHNDSSPEPL--VGGETVFYGS 200 (247)
Q Consensus 141 ~~f~~H~D~~~~~~~~~~r~~T~llYLN~~~~~~~~~~~~~~~~~~~d~~--eGGeT~F~~~ 200 (247)
....+|.|..+.... -.+++|.-+. .+. +||+|.|-+.
T Consensus 96 ~~~~~HtD~sy~~~p---p~~~~L~c~~-------------------~p~~~~GG~T~~~d~ 135 (273)
T 1nx8_A 96 GQLPFHADGGLLLSQ---VDQVFLYAAE-------------------IKNVKFRGATTVCDH 135 (273)
T ss_dssp SCEEEECTTTTTTCC---CCEEEEEEEE-------------------EESCSSSSCEEEEEH
T ss_pred cCCCCcCCCCCccCC---CeeEEEEeEe-------------------CCCCCCCCcchhhhH
Confidence 456799999875422 2366666666 344 8999999864
No 42
>2wbq_A L-arginine beta-hydroxylase; oxidoreductase, non-heme Fe(II) hydroxylase, cbeta- hydroxylation, L-arginine oxygenase, NRPS, viomycin; HET: ZZU; 1.10A {Streptomyces vinaceus} PDB: 2wbp_A* 2wbo_A*
Probab=38.48 E-value=31 Score=30.24 Aligned_cols=37 Identities=27% Similarity=0.398 Sum_probs=25.9
Q ss_pred CcccccccCCccCCCCceeEEEEEEEecCccccccccccCCCCCCCCCCCcCcceEEecC
Q 025868 141 QRFGQHIDESVNLGDGKRTHYTLLIYLSGGLKAKAKNDLSIHNDSSPEPLVGGETVFYGS 200 (247)
Q Consensus 141 ~~f~~H~D~~~~~~~~~~r~~T~llYLN~~~~~~~~~~~~~~~~~~~d~~eGGeT~F~~~ 200 (247)
+...+|.|..+.... -.+++|.-|. .+. ||+|.|-..
T Consensus 163 ~~l~~HtD~sy~~~p---p~~~~L~cl~-------------------~p~-gG~T~~ad~ 199 (358)
T 2wbq_A 163 QELGWHTEDAFSPYR---ADYVGLLSLR-------------------NPD-GVATTLAGV 199 (358)
T ss_dssp SCEEEECTTTTCTTC---CSEEEEEEEE-------------------CTT-CCEEEEEEC
T ss_pred CCccccccCCCCCCC---CCeEEEEeEe-------------------cCC-CCCceEEec
Confidence 446799999875432 2367777777 344 899999864
No 43
>3r1j_A Alpha-ketoglutarate-dependent taurine dioxygenase; ssgcid, oxidoreductase, structural genomics; 2.05A {Mycobacterium avium} SCOP: b.82.2.0 PDB: 3swt_A
Probab=38.08 E-value=30 Score=29.97 Aligned_cols=37 Identities=19% Similarity=0.237 Sum_probs=25.7
Q ss_pred CcccccccCCccCCCCceeEEEEEEEecCccccccccccCCCCCCCCCCCcCcceEEec
Q 025868 141 QRFGQHIDESVNLGDGKRTHYTLLIYLSGGLKAKAKNDLSIHNDSSPEPLVGGETVFYG 199 (247)
Q Consensus 141 ~~f~~H~D~~~~~~~~~~r~~T~llYLN~~~~~~~~~~~~~~~~~~~d~~eGGeT~F~~ 199 (247)
....+|.|..+.... ..+++|.-+. -+..||+|.|-+
T Consensus 98 ~~~~wH~D~s~~~~p---p~~~~l~~~~-------------------~p~~GG~T~fad 134 (301)
T 3r1j_A 98 KATRWHTDVTFAANY---PAASILRAVT-------------------LPSYGGSTLWAS 134 (301)
T ss_dssp -CCSCBCTTTTSSSC---CSEEEEEEEE-------------------CCSSCCCEEEEE
T ss_pred CCCCCccccCCccCC---CceeEEEEee-------------------cCCCCCCCeeEc
Confidence 446799999986432 2366666666 456899999974
No 44
>3eat_X Pyoverdine biosynthesis protein PVCB; paerucumarin, Fe/alpha-ketoglutarate dependent hydroxylase, 2-isocyano-6,7-dihydroxycoumarin; 2.50A {Pseudomonas aeruginosa}
Probab=37.76 E-value=31 Score=29.52 Aligned_cols=39 Identities=15% Similarity=0.152 Sum_probs=25.8
Q ss_pred cccccccCCccCCCCceeEEEEEEEecCccccccccccCCCCCCCCCCCcCcceEEecC
Q 025868 142 RFGQHIDESVNLGDGKRTHYTLLIYLSGGLKAKAKNDLSIHNDSSPEPLVGGETVFYGS 200 (247)
Q Consensus 142 ~f~~H~D~~~~~~~~~~r~~T~llYLN~~~~~~~~~~~~~~~~~~~d~~eGGeT~F~~~ 200 (247)
...+|.|..+.. ..-.+++|.-+.-. ....||+|.|-+.
T Consensus 108 ~~~wHtD~sy~~---~pp~~~~L~c~~~p-----------------~~~~GG~T~~~d~ 146 (293)
T 3eat_X 108 YVPLHWDGMYLE---TVPEFQVFHCVDAP-----------------GDSDGGRTTFSST 146 (293)
T ss_dssp CEEEECTTTTSS---EEEEEEEEEEEECC-----------------SCCSBCCEEEEEH
T ss_pred CccceECCCCcC---CCCceEEEEeEeCC-----------------CCCCCCceEEeeH
Confidence 456999998753 23346777666621 2238999999753
No 45
>3o2g_A Gamma-butyrobetaine dioxygenase; gamma-butyrobetaine hydroxylase, 2-OXOG dioxygenase 1, oxidoreductase, structural genomics; HET: OGA NM2; 1.78A {Homo sapiens} PDB: 3ms5_A* 3n6w_A
Probab=36.79 E-value=32 Score=30.77 Aligned_cols=37 Identities=16% Similarity=0.260 Sum_probs=26.1
Q ss_pred cccccccCCccCCCCceeEEEEEEEecCccccccccccCCCCCCCCCCCcCcceEEecC
Q 025868 142 RFGQHIDESVNLGDGKRTHYTLLIYLSGGLKAKAKNDLSIHNDSSPEPLVGGETVFYGS 200 (247)
Q Consensus 142 ~f~~H~D~~~~~~~~~~r~~T~llYLN~~~~~~~~~~~~~~~~~~~d~~eGGeT~F~~~ 200 (247)
...+|.|..+.... ..+++|.-+. .+.+||+|.|-..
T Consensus 199 ~l~~HtD~sy~~~p---p~~~~L~c~~-------------------~~~~GG~T~~~d~ 235 (388)
T 3o2g_A 199 KLSFHTDYPALHHP---PGVQLLHCIK-------------------QTVTGGDSEIVDG 235 (388)
T ss_dssp CEEEECSCTTSSSC---CSEEEEEEEE-------------------CCSSSCCEEEEEH
T ss_pred CcccccCCCccCCC---CcEEEEEEEe-------------------cCCCCCcCeeecH
Confidence 34699999876432 2367777777 4569999999753
No 46
>1oih_A Putative alkylsulfatase ATSK; non-heme Fe(II) alphaketoglutarate dependent dioxygenase, jelly roll, oxidoreductase; 1.89A {Pseudomonas putida} SCOP: b.82.2.5 PDB: 1oii_A* 1oij_B* 1vz4_A 1vz5_A 1oik_A* 1oij_A* 1oij_C*
Probab=36.78 E-value=30 Score=29.54 Aligned_cols=39 Identities=13% Similarity=-0.043 Sum_probs=30.9
Q ss_pred eeEEecCCCcEEEEecCCCCCccccccccc-ccEEEEEEeee
Q 025868 205 LAEVAPIEGMALIHIHGDKCMLHEARNVIK-GVKYIFRSDVV 245 (247)
Q Consensus 205 ~~~V~P~~G~aviF~~~d~~~lH~g~PV~~-G~Kyiirtdv~ 245 (247)
.+.++=++|++|||.|. +++|...+-.. +.|+..|..|.
T Consensus 244 ~~~~~w~~GDvvi~DNr--~~lH~r~~f~~~~~R~l~R~~i~ 283 (301)
T 1oih_A 244 TVRWRWEAGDVAIWDNR--ATQHYAVDDYGTQPRIVRRVTLA 283 (301)
T ss_dssp EEEECCCTTCEEEEETT--SEEEEECCCCTTSCCEEEEEEEC
T ss_pred eEEEEEcCCCEEEEEcc--ceeecccCCCCCCceEEEEEEEe
Confidence 46677789999999884 79999998764 36888887763
No 47
>2og5_A Putative oxygenase; non-ribosomal peptide synthesis, iron(II)/alpha-ketoglutarat dependent hydroxylase, jelly-roll fold; 1.45A {Streptomyces coelicolor} PDB: 2og6_A 2og7_A*
Probab=35.25 E-value=26 Score=30.86 Aligned_cols=37 Identities=11% Similarity=0.164 Sum_probs=26.1
Q ss_pred CcccccccCCccCCCCceeEEEEEEEecCccccccccccCCCCCCCCCCCcCcceEEec
Q 025868 141 QRFGQHIDESVNLGDGKRTHYTLLIYLSGGLKAKAKNDLSIHNDSSPEPLVGGETVFYG 199 (247)
Q Consensus 141 ~~f~~H~D~~~~~~~~~~r~~T~llYLN~~~~~~~~~~~~~~~~~~~d~~eGGeT~F~~ 199 (247)
....+|.|..+.... -.+++|.-|. .+.+||+|.|..
T Consensus 174 ~~l~~HtD~sy~~~p---P~~~~L~cl~-------------------~~~~GG~t~~~~ 210 (357)
T 2og5_A 174 TLLTFHNENAFHEHR---PDFVMLLCLR-------------------ADPTGRAGLRTA 210 (357)
T ss_dssp SCEEEECTTTTCTTC---CSEEEEEEEE-------------------CCTTSCCCEEEE
T ss_pred ccccccccCCCCCCC---CCeEEEEEEc-------------------cCCCCCccEEEe
Confidence 456799999875422 2367777777 567899988764
No 48
>2dbn_A Hypothetical protein YBIU; alpha/beta structure, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Escherichia coli} PDB: 2dbi_A 2csg_A*
Probab=34.77 E-value=17 Score=33.85 Aligned_cols=31 Identities=10% Similarity=0.234 Sum_probs=24.4
Q ss_pred eeeeecCCCEEEEcCCCCHHHHHHHHHHHHh
Q 025868 42 RVSRLKDTDLFTVQNFFTSAESKGFVKAAEA 72 (247)
Q Consensus 42 ~v~~~~~~~i~vi~~fLs~~EC~~Li~~~e~ 72 (247)
..+.|+..+++||.|+++.+++....+.+.+
T Consensus 118 ~~~~ir~rG~vVIRgvvp~e~A~~~~~~~~~ 148 (461)
T 2dbn_A 118 QREQIKRRGCAVIKGHFPREQALGWDQSMLD 148 (461)
T ss_dssp HHHHHHHHSEEEEETSSCHHHHHHHHHHHHH
T ss_pred HHHHHHhccEEEECCCCCHHHHHHHHHHHHH
Confidence 3356677899999999999999877665544
No 49
>4aiv_A Probable nitrite reductase [NAD(P)H] small subuni; oxidoreductase, nitrite metabolism; 2.00A {Mycobacterium tuberculosis}
Probab=32.99 E-value=1.4e+02 Score=21.76 Aligned_cols=45 Identities=9% Similarity=-0.099 Sum_probs=28.3
Q ss_pred CCCcCcceEEecCCCceeeEEecCCCcEEEEecCCCCCcccccccccc
Q 025868 188 EPLVGGETVFYGSRNKLLAEVAPIEGMALIHIHGDKCMLHEARNVIKG 235 (247)
Q Consensus 188 d~~eGGeT~F~~~~~~~~~~V~P~~G~aviF~~~d~~~lH~g~PV~~G 235 (247)
|-..|+...+...+++...-++...|.+-.+.+. -.|.+.|+.+|
T Consensus 18 dL~~g~~~~~~~~~G~~v~l~r~~dG~v~A~~n~---CpH~ga~L~~~ 62 (119)
T 4aiv_A 18 HLIPGRGVGVLLDDGSQVALFRLDDGSVHAVGNV---DPFSGAAVMSR 62 (119)
T ss_dssp GSCTTCCEEEECTTSCEEEEEECTTSCEEEEESB---CTTTCCBCGGG
T ss_pred HcCCCCceEEEEcCCcEEEEEEcCCCeEEEEECC---CCCCCCccccC
Confidence 4455655555543333223346667888777764 69999998776
No 50
>3ktp_B Trinucleotide repeat-containing gene 6C protein; protein-protein complex, methylation, mRNA processing, mRNA nucleus, phosphoprotein, RNA-binding; 1.50A {Homo sapiens}
Probab=32.09 E-value=18 Score=19.14 Aligned_cols=12 Identities=33% Similarity=0.853 Sum_probs=8.3
Q ss_pred CCCCC-CCCCCCC
Q 025868 28 TTSNW-PIIKPKQ 39 (247)
Q Consensus 28 ~~~~~-p~~~p~~ 39 (247)
.+.|| |.|+|..
T Consensus 2 s~~sWpPef~pg~ 14 (22)
T 3ktp_B 2 SSINWPPEFHPGV 14 (26)
T ss_pred CcccCCcccccCC
Confidence 46789 5888754
No 51
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=31.09 E-value=2e+02 Score=23.06 Aligned_cols=31 Identities=10% Similarity=0.113 Sum_probs=21.1
Q ss_pred EecCCCcEEEEecCCCCCcccccccccccEEEEE
Q 025868 208 VAPIEGMALIHIHGDKCMLHEARNVIKGVKYIFR 241 (247)
Q Consensus 208 V~P~~G~aviF~~~d~~~lH~g~PV~~G~Kyiir 241 (247)
..-++|+++++|.+ ..|+........|+++.
T Consensus 193 ~~l~~Gd~i~ip~~---~~H~~~~~~~~~~~ll~ 223 (227)
T 3rns_A 193 FIVKKGESAVLPAN---IPHAVEAETENFKMLLI 223 (227)
T ss_dssp EEEETTEEEEECTT---SCEEEECCSSCEEEEEE
T ss_pred EEECCCCEEEECCC---CcEEEEeCCCCEEEEEE
Confidence 33457999999987 88987662334566553
No 52
>2q1z_B Anti-sigma factor CHRR, transcriptional activator; ECF sigma factor, cupin fold, zinc bindin transcription factor; 2.40A {Rhodobacter sphaeroides} PDB: 2z2s_B
Probab=29.37 E-value=1.7e+02 Score=23.24 Aligned_cols=20 Identities=20% Similarity=0.129 Sum_probs=14.5
Q ss_pred CceEEEecCCCCcccccccC
Q 025868 130 PNIRFYRYKVGQRFGQHIDE 149 (247)
Q Consensus 130 e~~q~~rY~~G~~f~~H~D~ 149 (247)
+.+.++||.+|..+..|.=.
T Consensus 125 ~~v~l~~~~pG~~~p~H~H~ 144 (195)
T 2q1z_B 125 AIARLLWIPGGQAVPDHGHR 144 (195)
T ss_dssp SEEEEEEECTTCBCCCCCCS
T ss_pred cEEEEEEECCCCCCCCcCCC
Confidence 45677888888888777653
No 53
>2q4a_A Clavaminate synthase-like protein AT3G21360; ensemble refinement, refinement methodology development, AT3 structural genomics; 2.39A {Arabidopsis thaliana} SCOP: b.82.2.8 PDB: 1y0z_A
Probab=26.32 E-value=34 Score=29.52 Aligned_cols=33 Identities=18% Similarity=0.175 Sum_probs=25.1
Q ss_pred eEEecCCCcEEEEecCCCCCcccccccccccEEEEE
Q 025868 206 AEVAPIEGMALIHIHGDKCMLHEARNVIKGVKYIFR 241 (247)
Q Consensus 206 ~~V~P~~G~aviF~~~d~~~lH~g~PV~~G~Kyiir 241 (247)
+.++=++|++|||.|. +++|+..+. .|.+-++.
T Consensus 294 ~~~~w~~GDv~i~DN~--~~lH~R~~f-~g~rR~l~ 326 (330)
T 2q4a_A 294 VAVPWQRGDVLLIDNW--AVLHSRRPF-DPPRRVLA 326 (330)
T ss_dssp BCCCCCTTCEEEEETT--TEEEEECCE-ESCCEEEE
T ss_pred eecCCCCCCEEEEecc--cccccCCCC-CCCceEEE
Confidence 4566679999999884 699999995 56654443
No 54
>1jr7_A GABT protein, hypothetical 37.4 kDa protein in ILEY-GABD interg region; gamma amino-butyric acid metabolism, GABA; 2.00A {Escherichia coli} SCOP: b.82.2.3 PDB: 2r6s_A*
Probab=26.12 E-value=74 Score=27.91 Aligned_cols=40 Identities=18% Similarity=0.168 Sum_probs=31.0
Q ss_pred eeEEecCCCcEEEEecCCCCCccccccccc--cc-EEEEEEeeee
Q 025868 205 LAEVAPIEGMALIHIHGDKCMLHEARNVIK--GV-KYIFRSDVVF 246 (247)
Q Consensus 205 ~~~V~P~~G~aviF~~~d~~~lH~g~PV~~--G~-Kyiirtdv~y 246 (247)
.+.++-++|.+|||.|. ++||+-..... |. |+.+|---.|
T Consensus 258 ~~~~kL~pGd~vifDN~--RvLHGR~aF~~~~g~~R~L~R~~G~Y 300 (311)
T 1jr7_A 258 ILSVPVPVGKFLLINNL--FWLHGRDRFTPHPDLRRELMRQRGYF 300 (311)
T ss_dssp CEEECCCTTCEEEEETT--TEEEEECCBCCCTTCEEEEEEEEEEE
T ss_pred EEEEEcCCCcEEEEeCC--ccccCcCCcCCCCCCceEEecccEEE
Confidence 46788889999999874 79999998874 54 8887654444
No 55
>3fjs_A Uncharacterized protein with RMLC-like cupin fold; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha JMP134}
Probab=25.89 E-value=1.8e+02 Score=20.56 Aligned_cols=28 Identities=14% Similarity=0.150 Sum_probs=20.1
Q ss_pred EecCCCcEEEEecCCCCCcccccccccccEEE
Q 025868 208 VAPIEGMALIHIHGDKCMLHEARNVIKGVKYI 239 (247)
Q Consensus 208 V~P~~G~aviF~~~d~~~lH~g~PV~~G~Kyi 239 (247)
..-++|++++++.+ ..|+..... ..++.
T Consensus 76 ~~l~~Gd~i~ip~~---~~H~~~~~~-~~~~~ 103 (114)
T 3fjs_A 76 RRLHQGDLLYLGAG---AAHDVNAIT-NTSLL 103 (114)
T ss_dssp EEECTTEEEEECTT---CCEEEEESS-SEEEE
T ss_pred EEECCCCEEEECCC---CcEEEEeCC-CcEEE
Confidence 44567999999987 899887663 33443
No 56
>1dgw_A Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_A 1cau_A 1cav_A 1caw_A 1cax_A
Probab=24.58 E-value=1.7e+02 Score=22.64 Aligned_cols=24 Identities=17% Similarity=-0.085 Sum_probs=17.9
Q ss_pred ecCCCcEEEEecCCCCCcccccccccc
Q 025868 209 APIEGMALIHIHGDKCMLHEARNVIKG 235 (247)
Q Consensus 209 ~P~~G~aviF~~~d~~~lH~g~PV~~G 235 (247)
.-++|++++||.+ ..|.-.-.-.+
T Consensus 86 ~l~~GDv~~~P~g---~~H~~~N~g~~ 109 (178)
T 1dgw_A 86 KLDQGDAIKIQAG---TPFYLINPDNN 109 (178)
T ss_dssp EEETTEEEEECTT---CCEEEEECCSS
T ss_pred EECCCCEEEECCC---CeEEEEeCCCC
Confidence 4457999999987 78877665544
No 57
>3es4_A Uncharacterized protein DUF861 with A RMLC-like C; 17741406, protein of unknown function (DUF861) with A RMLC-L fold; HET: MSE; 1.64A {Agrobacterium tumefaciens str}
Probab=24.14 E-value=45 Score=24.87 Aligned_cols=26 Identities=15% Similarity=-0.026 Sum_probs=18.2
Q ss_pred EecCCCcEEEEecCCCCCcccccccc
Q 025868 208 VAPIEGMALIHIHGDKCMLHEARNVI 233 (247)
Q Consensus 208 V~P~~G~aviF~~~d~~~lH~g~PV~ 233 (247)
+.-.+|++++|+.+....++-..+|.
T Consensus 82 ~~l~aGD~~~~P~G~~gtWev~e~vr 107 (116)
T 3es4_A 82 VKIGPGSIVSIAKGVPSRLEILSSFR 107 (116)
T ss_dssp EEECTTEEEEECTTCCEEEEECSCEE
T ss_pred EEECCCCEEEECCCCeEEEEEeEEEe
Confidence 44457999999988655665555554
No 58
>3d82_A Cupin 2, conserved barrel domain protein; structural genomics, joint center for structural genomics; 2.05A {Shewanella frigidimarina ncimb 400}
Probab=23.14 E-value=86 Score=21.08 Aligned_cols=20 Identities=15% Similarity=0.132 Sum_probs=16.4
Q ss_pred cCCCcEEEEecCCCCCccccccc
Q 025868 210 PIEGMALIHIHGDKCMLHEARNV 232 (247)
Q Consensus 210 P~~G~aviF~~~d~~~lH~g~PV 232 (247)
-.+|++++++.+ ..|.....
T Consensus 72 l~~Gd~~~ip~~---~~H~~~~~ 91 (102)
T 3d82_A 72 LQAGEMYVIPKG---VEHKPMAK 91 (102)
T ss_dssp EETTEEEEECTT---CCBEEEEE
T ss_pred EcCCCEEEECCC---CeEeeEcC
Confidence 346999999987 79988775
No 59
>1ds1_A Clavaminate synthase 1; oxygenase, trifunctional enzyme, oxidoreductase,lyase; HET: AKG; 1.08A {Streptomyces clavuligerus} SCOP: b.82.2.2 PDB: 1drt_A* 1ds0_A 1dry_A* 1gvg_A*
Probab=22.36 E-value=94 Score=26.64 Aligned_cols=38 Identities=11% Similarity=0.064 Sum_probs=24.9
Q ss_pred CCcccccccCCccCCCCceeEEEEEEEecCccccccccccCCCCCCCCCCCc-CcceEEec
Q 025868 140 GQRFGQHIDESVNLGDGKRTHYTLLIYLSGGLKAKAKNDLSIHNDSSPEPLV-GGETVFYG 199 (247)
Q Consensus 140 G~~f~~H~D~~~~~~~~~~r~~T~llYLN~~~~~~~~~~~~~~~~~~~d~~e-GGeT~F~~ 199 (247)
.....+|.|..+.... -.+++|.-|. .+.+ ||+|.|-.
T Consensus 138 ~~~l~~HtD~sy~~~p---P~~~~L~c~~-------------------~~~~GGg~T~~~~ 176 (324)
T 1ds1_A 138 ETLLEFHTEMAYHRLQ---PNYVMLACSR-------------------ADHERTAATLVAS 176 (324)
T ss_dssp SSCEEEECTTTTBTTC---CSEEEEEEEE-------------------CCTTCCCCEEEEE
T ss_pred cCcccccccCCCCCCC---CCeEEEEEee-------------------cCccCCceEEEee
Confidence 3456799999876432 2367777777 3445 78888853
No 60
>1vm9_A Toluene-4-monooxygenase system protein C; structural genomics, CESG, protein structure initiative, PSI, ferredoxin, FES, [2Fe-2S] cluster; 1.48A {Pseudomonas mendocina} SCOP: b.33.1.1 PDB: 2q3w_A 1sjg_A
Probab=21.91 E-value=2.1e+02 Score=20.10 Aligned_cols=44 Identities=18% Similarity=0.000 Sum_probs=27.9
Q ss_pred CCcCcceEEecCCCceeeEEecCCCcEEEEecCCCCCcccccccccc
Q 025868 189 PLVGGETVFYGSRNKLLAEVAPIEGMALIHIHGDKCMLHEARNVIKG 235 (247)
Q Consensus 189 ~~eGGeT~F~~~~~~~~~~V~P~~G~aviF~~~d~~~lH~g~PV~~G 235 (247)
..+|+-..|....+...+-++-..|.+..|.+. -.|.++|+..|
T Consensus 11 l~~g~~~~~~~~~g~~v~v~r~~~g~~~A~~~~---CpH~g~~L~~g 54 (111)
T 1vm9_A 11 IWVGEMETFETSDGTEVLIVNSEEHGVKAYQAM---CPHQEILLSEG 54 (111)
T ss_dssp SCTTCEEEEECTTCCEEEEEEETTTEEEEEESB---CSSSSCBGGGS
T ss_pred CCCCCeEEEEEcCCCEEEEEEeCCCeEEEEeCc---CCCCCcCCCCc
Confidence 344555555431222233446568998889875 79999999877
No 61
>4e2g_A Cupin 2 conserved barrel domain protein; MCSG, PSI-biology, structural genomics, GEBA, midwest center structural genomics; HET: MSE; 1.86A {Sphaerobacter thermophilus}
Probab=20.90 E-value=2.2e+02 Score=19.90 Aligned_cols=24 Identities=29% Similarity=0.242 Sum_probs=18.4
Q ss_pred EecCCCcEEEEecCCCCCccccccccc
Q 025868 208 VAPIEGMALIHIHGDKCMLHEARNVIK 234 (247)
Q Consensus 208 V~P~~G~aviF~~~d~~~lH~g~PV~~ 234 (247)
+.-.+|++++++.+ ..|.......
T Consensus 81 ~~l~~Gd~~~ip~~---~~H~~~~~~~ 104 (126)
T 4e2g_A 81 RVLRPGMAYTIPGG---VRHRARTFED 104 (126)
T ss_dssp EEECTTEEEEECTT---CCEEEECCTT
T ss_pred EEeCCCCEEEECCC---CcEEeEECCC
Confidence 44467999999987 7898876644
No 62
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=20.88 E-value=3.8e+02 Score=22.61 Aligned_cols=31 Identities=16% Similarity=0.084 Sum_probs=24.6
Q ss_pred CCCcEEEEecCCCCCcccccccccc-cEEEEEEee
Q 025868 211 IEGMALIHIHGDKCMLHEARNVIKG-VKYIFRSDV 244 (247)
Q Consensus 211 ~~G~aviF~~~d~~~lH~g~PV~~G-~Kyiirtdv 244 (247)
++|++++...+ ..|+-..+-.+ -+|++--|+
T Consensus 230 ~~GD~i~~~~~---~~h~~~n~G~e~~~yl~ykd~ 261 (266)
T 4e2q_A 230 QAGDVIWMAPF---VPQWYAALGKTRSRYLLYKDV 261 (266)
T ss_dssp ETTCEEEECTT---CCEEEEEESSSCEEEEEEEEC
T ss_pred cCCCEEEECCC---CcEEEEeCCCCCEEEEEEccc
Confidence 47999999877 78988888655 499987775
No 63
>3dgp_A RNA polymerase II transcription factor B subunit; protein-protein complex, beta-alpha-beta spilt, heterodimer, damage, DNA excision; 1.80A {Saccharomyces cerevisiae}
Probab=20.65 E-value=73 Score=22.25 Aligned_cols=29 Identities=24% Similarity=0.162 Sum_probs=24.5
Q ss_pred ecCCCEEEEcCCCCHHHHHHHHHHHHhCC
Q 025868 46 LKDTDLFTVQNFFTSAESKGFVKAAEAMG 74 (247)
Q Consensus 46 ~~~~~i~vi~~fLs~~EC~~Li~~~e~~~ 74 (247)
|.-..-+++++|.|.+|-+.+.+.|++.+
T Consensus 18 l~~~~g~Ly~~F~s~~efe~~~~yA~e~g 46 (80)
T 3dgp_A 18 VITYEGSLYSDFETSQEYNLLSKYAQDIG 46 (80)
T ss_dssp CEEEEEEEEECCSCHHHHHHHHHHHHHTT
T ss_pred eeccceEEEecCCCHHHHHHHHHHHHHcC
Confidence 33345788999999999999999999975
No 64
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=20.44 E-value=1.4e+02 Score=27.81 Aligned_cols=28 Identities=18% Similarity=0.164 Sum_probs=19.4
Q ss_pred cCCCcEEEEecCCCCCcccccccccccEEEE
Q 025868 210 PIEGMALIHIHGDKCMLHEARNVIKGVKYIF 240 (247)
Q Consensus 210 P~~G~aviF~~~d~~~lH~g~PV~~G~Kyii 240 (247)
-++|++.+||.+ +.|.-.....|..|+.
T Consensus 407 l~~GDV~v~P~G---~~H~~~a~~e~~~~l~ 434 (496)
T 3ksc_A 407 LEAGRALTVPQN---YAVAAKSLSDRFSYVA 434 (496)
T ss_dssp EETTCEEEECTT---CEEEEEECSSEEEEEE
T ss_pred ecCCeEEEECCC---CEEEEEeCCCCEEEEE
Confidence 347999999988 7886554444555554
Done!