BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025869
(247 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FM04|GDL88_ARATH GDSL esterase/lipase At5g62930 OS=Arabidopsis thaliana GN=At5g62930
PE=2 SV=3
Length = 242
Score = 382 bits (980), Expect = e-105, Method: Compositional matrix adjust.
Identities = 179/243 (73%), Positives = 206/243 (84%), Gaps = 1/243 (0%)
Query: 1 MRPQIVLFGDSITQQSFGSAGWGAALADAYCRKADVLLRGYGGYNTRWALFLLHHIFPLD 60
MRP+IVLFGDSIT QSF S GWG+ALADAY RKADV++RGYGGYNTRWALFLLHHIFPL
Sbjct: 1 MRPEIVLFGDSITAQSFRSGGWGSALADAYSRKADVVVRGYGGYNTRWALFLLHHIFPLG 60
Query: 61 NSNPPVATTIFFGANDAALFGRTSERQHVPVEEYGDNLKIMVQHLKRLSPIMLVVLITPP 120
+S+PPVATTIFFGANDAAL GRTS+RQHVPVEEY DN++ +VQHLK+ SP ML+VLITPP
Sbjct: 61 SSSPPVATTIFFGANDAALKGRTSDRQHVPVEEYTDNVRKIVQHLKKCSPTMLIVLITPP 120
Query: 121 PVDEDGRMEYAKSLYGEKAMKLPERTNEMTGVYARQCIETAKDLGVPFIDLWSKMQETEG 180
P+DE GR YA+S+YGEKAMK PERTNE TGVYA+ C+ A++LG+ ++LWSKMQET
Sbjct: 121 PIDEAGRQSYAESIYGEKAMKEPERTNETTGVYAQHCVALAEELGLRCVNLWSKMQETND 180
Query: 181 WQKKFLSDGLHLTEEGNAVVHKEVVEVFSVAGLSSEEMPYDFPHHSQIDAKNPEKTFQQQ 240
WQKK+LSDGLHLT EGN VV EV VF A LS EEMP+DFPHHS ID KNP K F ++
Sbjct: 181 WQKKYLSDGLHLTPEGNGVVFDEVSRVFREAWLSPEEMPFDFPHHSHIDGKNPSKAF-EE 239
Query: 241 QCL 243
+CL
Sbjct: 240 RCL 242
>sp|Q6NMR9|GDL84_ARATH GDSL esterase/lipase At5g45920 OS=Arabidopsis thaliana GN=At5g45920
PE=2 SV=1
Length = 241
Score = 243 bits (619), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 118/242 (48%), Positives = 157/242 (64%), Gaps = 6/242 (2%)
Query: 1 MRPQIVLFGDSITQQSFGSAGWGAALADAYCRKADVLLRGYGGYNTRWALFLLHHIFPL- 59
MR +I LFGDSIT++SF GWGA+LAD RKAD++LRGY GYNTRWAL ++ +FP+
Sbjct: 2 MRRKIFLFGDSITEESFSDGGWGASLADLLRRKADMVLRGYSGYNTRWALKVVERVFPVA 61
Query: 60 --DNSNPPVATTIFFGANDAALFGRTSERQHVPVEEYGDNLKIMVQHLKRLSPIMLVVLI 117
D + P A T+FFGANDA L R S QHVP+ EY NL+ +V LK P ++LI
Sbjct: 62 EEDGGDSPAAVTVFFGANDACLPERCSGFQHVPLHEYKQNLRSIVSFLKNRWPQTAIILI 121
Query: 118 TPPPVDEDGRMEYAKSLYGEKAMKLPERTNEMTGVYARQCIETAKDLGVPFIDLWSKMQE 177
TPPP+DE+ R+ Y Y E LPERTNE+ G+YA+ CI A++ + DLWSKMQ+
Sbjct: 122 TPPPIDEEARLRYP---YIENTTGLPERTNEVAGLYAKACIAVAEECQISVTDLWSKMQQ 178
Query: 178 TEGWQKKFLSDGLHLTEEGNAVVHKEVVEVFSVAGLSSEEMPYDFPHHSQIDAKNPEKTF 237
WQ + L DGLHL+ GN VV +EV + G+ +E++ D P +D K+P K+F
Sbjct: 179 IPNWQTECLWDGLHLSRVGNKVVFEEVAKKLKEEGIGAEDLAVDLPLIEDVDPKDPLKSF 238
Query: 238 QQ 239
+
Sbjct: 239 DE 240
>sp|Q2TAA2|IAH1_HUMAN Isoamyl acetate-hydrolyzing esterase 1 homolog OS=Homo sapiens
GN=IAH1 PE=1 SV=1
Length = 248
Score = 172 bits (436), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 100/239 (41%), Positives = 140/239 (58%), Gaps = 12/239 (5%)
Query: 1 MRPQIVLFGDSITQQSFGSAGWGAALADAYCRKADVLLRGYGGYNTRWALFLLHHIFPLD 60
+ P+++LFGDSITQ SF GWGA+LAD RK DVL RG+ GYNTRWA +L +
Sbjct: 14 LWPRLLLFGDSITQFSFQQGGWGASLADRLVRKCDVLNRGFSGYNTRWAKIILPRLIRKG 73
Query: 61 NS-NPPVATTIFFGANDAALFGRTSERQHVPVEEYGDNLKIMVQHLKRLS-PIMLVVLIT 118
NS + PVA TIFFGAND+AL + +QH+P+EEY NLK MVQ+LK + P V+LIT
Sbjct: 74 NSLDIPVAVTIFFGANDSAL-KDENPKQHIPLEEYAANLKSMVQYLKSVDIPENRVILIT 132
Query: 119 PPPVDEDGRMEYAKSLYGEKAMKLPERTNEMTGVYARQCIETAKDLGVPFIDLWSKMQET 178
P P+ E E + KL R N + G YA C++ A+D G +DLW+ MQ++
Sbjct: 133 PTPLCETAWEEQCII----QGCKL-NRLNSVVGEYANACLQVAQDCGTDVLDLWTLMQDS 187
Query: 179 EGWQKKFLSDGLHLTEEGNAVVHKEVVEVFSVAGLSSEEMPYDFPHHSQIDAKNPEKTF 237
+ + +LSDGLHL+ +GN + ++ + +P P+ + PE +
Sbjct: 188 QDF-SSYLSDGLHLSPKGNEFLFS---HLWPLIEKKVSSLPLLLPYWRDVAEAKPELSL 242
>sp|Q9SRM5|CPR49_ARATH GDSL esterase/lipase CPRD49 OS=Arabidopsis thaliana GN=CPRD49 PE=2
SV=1
Length = 256
Score = 172 bits (435), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 87/232 (37%), Positives = 136/232 (58%), Gaps = 9/232 (3%)
Query: 2 RPQIVLFGDSITQQSFGSAGWGAALADAYCRKADVLLRGYGGYNTRWALFLLHHIFPLDN 61
RPQIVLFG SI Q SFG GWGA L++ Y RKAD++LRGY G+N+ AL ++ +FP D
Sbjct: 6 RPQIVLFGSSIVQMSFGHGGWGAILSEVYARKADIILRGYYGWNSSRALEVVDQVFPKDA 65
Query: 62 SNPPVATTIFFGANDAALFGRTSERQHVPVEEYGDNLKIMVQHLKRLSPIMLVVLITPPP 121
+ P ++FG ND+ + HVP+ EY DN+K + HL+ LS ++ ++ PP
Sbjct: 66 AVQPSLVIVYFGGNDSMAPHSSGLGPHVPLTEYVDNMKKIALHLQSLSDFTRIIFLSSPP 125
Query: 122 VDEDGRMEYAKSLYGEKAMKLPERTNEMTGVYARQCIETAKDLGVPFIDLWSKMQETEGW 181
VDE ++ +S Y + + RTN++ Y+ C+E ++LG+ +DL+S Q+ + W
Sbjct: 126 VDE-AKVRQNQSPYLSEVI----RTNDLCKTYSDACVELCQELGLEVVDLFSTFQKADDW 180
Query: 182 QKKFLSDGLHLTEEGNAVVHKEVVEVFSVA----GLSSEEMPYDFPHHSQID 229
+ +DG+HL+ +G+ +V E++ V A L + MP +F S D
Sbjct: 181 KTVCFTDGIHLSAQGSKIVAGEILRVVKEAEWHPSLHWKSMPTEFADDSPYD 232
>sp|Q3SZ16|IAH1_BOVIN Isoamyl acetate-hydrolyzing esterase 1 homolog OS=Bos taurus
GN=IAH1 PE=2 SV=1
Length = 249
Score = 170 bits (431), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 99/237 (41%), Positives = 141/237 (59%), Gaps = 11/237 (4%)
Query: 3 PQIVLFGDSITQQSFGSAGWGAALADAYCRKADVLLRGYGGYNTRWALFLLHHIFPLDNS 62
P+++LFGDSITQ SF GWGA+LAD RK DVL RG+ GYNTRWA +L + +
Sbjct: 16 PRVLLFGDSITQFSFQQGGWGASLADMLVRKCDVLNRGFSGYNTRWAKIILPRLVRKGSG 75
Query: 63 -NPPVATTIFFGANDAALFGRTSERQHVPVEEYGDNLKIMVQHLKRLS-PIMLVVLITPP 120
+ PVA TIFFGAND+AL + +QHVP+EE+ NL+ MV++L+ + P ++LITPP
Sbjct: 76 LDSPVAVTIFFGANDSAL-KDENPKQHVPLEEFVANLRSMVRYLRSVDVPEGRLILITPP 134
Query: 121 PVDEDGRMEYAKSLYGEKAMKLPERTNEMTGVYARQCIETAKDLGVPFIDLWSKMQETEG 180
P+ E +A+ ++ KL R N + G YAR C++ A+D G +DLWS MQ+
Sbjct: 135 PLCE---AAWAQECL-QQGCKL-NRLNSVVGEYARACLQVAQDCGADALDLWSLMQKDGQ 189
Query: 181 WQKKFLSDGLHLTEEGNAVVHKEVVEVFSVAGLSSEEMPYDFPHHSQIDAKNPEKTF 237
+LSDGLHL+ +GN V ++ + +P+ P+ I PE +
Sbjct: 190 DFSSYLSDGLHLSPKGNEFVFS---HLWPLIEKKVSSLPFLLPYWRDIAEARPELSL 243
>sp|Q9DB29|IAH1_MOUSE Isoamyl acetate-hydrolyzing esterase 1 homolog OS=Mus musculus
GN=Iah1 PE=2 SV=1
Length = 249
Score = 167 bits (424), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 97/240 (40%), Positives = 136/240 (56%), Gaps = 17/240 (7%)
Query: 3 PQIVLFGDSITQQSFGSAGWGAALADAYCRKADVLLRGYGGYNTRWALFLLHHIFP---- 58
P+++LFGDSITQ SF GWG+ LAD RK DVL RG+ GYNTRWA +L +
Sbjct: 16 PRVLLFGDSITQFSFQQGGWGSLLADRLVRKCDVLNRGFSGYNTRWAKIILPRLIRKGPG 75
Query: 59 LDNSNPPVATTIFFGANDAALFGRTSERQHVPVEEYGDNLKIMVQHLKRLS-PIMLVVLI 117
++N PVA TIFFGAND++L + +QHVP++EY NL+ MVQ+L+ + P V+LI
Sbjct: 76 MEN---PVAVTIFFGANDSSL-KDENPKQHVPLDEYSANLRDMVQYLRSVDVPRERVILI 131
Query: 118 TPPPVDEDGRMEYAKSLYGEKAMKLPERTNEMTGVYARQCIETAKDLGVPFIDLWSKMQE 177
TPPP+ E E L G K R N + G YA C++ A+D G +DLW+ MQ+
Sbjct: 132 TPPPLCE-AAWEKECVLKGCKL----NRLNSVVGEYANACLQVARDCGTDVLDLWTLMQK 186
Query: 178 TEGWQKKFLSDGLHLTEEGNAVVHKEVVEVFSVAGLSSEEMPYDFPHHSQIDAKNPEKTF 237
+LSDGLHL+ GN + + + +P+ P+ ++ PE +
Sbjct: 187 DSQDFSSYLSDGLHLSPMGNEFLFLNLCPLLDK---KVSSLPWLLPYWKDVEEAKPELSL 243
>sp|O80443|GDL46_ARATH GDSL esterase/lipase At2g38180 OS=Arabidopsis thaliana GN=At2g38180
PE=2 SV=1
Length = 312
Score = 167 bits (422), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 88/236 (37%), Positives = 140/236 (59%), Gaps = 13/236 (5%)
Query: 1 MRPQIVLFGDSITQQSFGSAGWGAALADAYCRKADVLLRGYGGYNTRWALFLLHHIFPLD 60
+RPQIVLFG SI Q SF GWGA LAD Y R AD++LRGY G+N+R+AL +LH +FP D
Sbjct: 5 VRPQIVLFGSSIVQYSFTDRGWGATLADLYSRTADIILRGYAGWNSRFALKVLHQVFPKD 64
Query: 61 NSNPPVATTIFFGANDAALFGRTSERQHVPVEEYGDNLKIMVQHLKRLSPIMLVVLITPP 120
P ++FG ND+ + HVP+ E+ +N++ + +HL LS V+ +TPP
Sbjct: 65 AVIQPSLVIVYFGGNDSTHPHPSGHGPHVPLSEFIENMRKIGEHLLSLSDKTRVIFLTPP 124
Query: 121 PVDEDGRMEYAKSLYGEKAMKLPERTNEMTGVYARQCIETAKDLGVPFIDLWSKMQETEG 180
P++E + + ++G+ A+K R+NE+ YA + + +++ V ID+W+ +Q+ +
Sbjct: 125 PMNE----KQIEIVFGD-AIK--GRSNELCRPYAEELLNLCREINVKGIDIWTAIQQQDD 177
Query: 181 WQKKFLSDGLHLTEEGNAVVHKEVVEVFSVA----GLSSEEMPYDFPHHSQIDAKN 232
W +DG+H T + + +V KE+++V A L + +P +FP DA N
Sbjct: 178 WLNSCFTDGIHFTAKASEIVVKEILKVLRGADWKPSLYWKSLPVEFPF--DFDAPN 231
>sp|Q711G3|IAH1_RAT Isoamyl acetate-hydrolyzing esterase 1 homolog OS=Rattus norvegicus
GN=Iah1 PE=2 SV=2
Length = 249
Score = 164 bits (415), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 99/240 (41%), Positives = 133/240 (55%), Gaps = 17/240 (7%)
Query: 3 PQIVLFGDSITQQSFGSAGWGAALADAYCRKADVLLRGYGGYNTRWALFLLHHIFP---- 58
P+++LFGDSITQ SF GWG LAD RK DVL RG+ GYNTRWA +L I
Sbjct: 16 PRVLLFGDSITQFSFQQGGWGTLLADRLVRKCDVLNRGFSGYNTRWAKIILPRIIRKGAG 75
Query: 59 LDNSNPPVATTIFFGANDAALFGRTSERQHVPVEEYGDNLKIMVQHLKRLS-PIMLVVLI 117
L+N PVA TIFFGAND+ L + +QHVP++EY NL+ MVQ+L+ + P V+LI
Sbjct: 76 LEN---PVAVTIFFGANDSTL-KDENPKQHVPLDEYSANLRDMVQYLRSVDIPKERVILI 131
Query: 118 TPPPVDEDGRMEYAKSLYGEKAMKLPERTNEMTGVYARQCIETAKDLGVPFIDLWSKMQE 177
TPPP+ E E L G K R N G YA+ C++ A+D G +DLW+ MQ+
Sbjct: 132 TPPPLCE-AAWEKECILKGCKL----NRLNVAVGEYAKACLQVARDCGTDVLDLWTLMQK 186
Query: 178 TEGWQKKFLSDGLHLTEEGNAVVHKEVVEVFSVAGLSSEEMPYDFPHHSQIDAKNPEKTF 237
+LSDGLHL+ GN + ++ + +P P ++ PE +
Sbjct: 187 DNQDFSSYLSDGLHLSPLGNEFLF---FHLWPLLDKKVSSLPRLLPDWKDVEETKPELSL 243
>sp|Q503L4|IAH1_DANRE Isoamyl acetate-hydrolyzing esterase 1 homolog OS=Danio rerio
GN=iah1 PE=2 SV=2
Length = 238
Score = 158 bits (400), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 94/237 (39%), Positives = 139/237 (58%), Gaps = 13/237 (5%)
Query: 3 PQIVLFGDSITQQSFGSAGWGAALADAYCRKADVLLRGYGGYNTRWALFLLHHIFPLDNS 62
PQI+LFGDSITQ +F + GWG+ L RK DV+ RG GYNTRWA +L I P+ ++
Sbjct: 10 PQIILFGDSITQFAFQANGWGSELCHKLERKCDVINRGLSGYNTRWAKIVLPRIVPVSDA 69
Query: 63 NPPVATTIFFGANDAALFGRTSERQHVPVEEYGDNLKIMVQHL--KRLSPIMLVVLITPP 120
P A T+FFGAND AL + + QHVP++E+ +NLK +V+ L K +S ++ ITPP
Sbjct: 70 -PISAVTVFFGANDCALEDK-NPTQHVPLQEFSENLKDIVRFLVSKGVSNDN-IIFITPP 126
Query: 121 PVDEDGRMEYAKSLYGEKAMKLPERTNEMTGVYARQCIETAKDLGVPFIDLWSKMQETEG 180
P+ E E L G R N + G YA+ C++ A + GV +DLW+ MQ+
Sbjct: 127 PLLE-ADWEKECLLKGSPL----NRLNSVAGQYAQACVQAAGESGVDVLDLWTLMQKDGQ 181
Query: 181 WQKKFLSDGLHLTEEGNAVVHKEVVEVFSVAGLSSEEMPYDFPHHSQIDAKNPEKTF 237
+LSDGLHL+++GN V + ++++ ++P+ P+ +D K PE +
Sbjct: 182 DFSVYLSDGLHLSDKGNQFVAE---HLWTLLERRVSDLPFILPYWGDVDPKCPESSL 235
>sp|P41734|IAH1_YEAST Isoamyl acetate-hydrolyzing esterase OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=IAH1 PE=1 SV=1
Length = 238
Score = 104 bits (260), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 79/217 (36%), Positives = 117/217 (53%), Gaps = 28/217 (12%)
Query: 4 QIVLFGDSITQQSFGSA---------GWGAALADAYCRKADVLLRGYGGYNTRWALFLLH 54
+ +LFGDSIT+ +F + GAAL + Y RK D+L RG+ GY +RWAL +L
Sbjct: 5 KFLLFGDSITEFAFNTRPIEDGKDQYALGAALVNEYTRKMDILQRGFKGYTSRWALKILP 64
Query: 55 HIFPLDNSNPPVATTIFFGANDAALFGRTSERQHVPVEEYGDNLKIMVQHLK--RLSPIM 112
I L + + V TIF GANDA ++ Q VP+ E+ DN++ MV +K + PI
Sbjct: 65 EI--LKHESNIVMATIFLGANDAC----SAGPQSVPLPEFIDNIRQMVSLMKSYHIRPI- 117
Query: 113 LVVLITPPPVDEDGRMEYAKSLYGEKAMKLPERTNEMTGVYARQCIETAKDLGVPFIDLW 172
+I P VD R ++ K E A+ RTNE +Y+ + A + VPF+ L
Sbjct: 118 ---IIGPGLVD---REKWEKEKSEEIALGY-FRTNENFAIYSDALAKLANEEKVPFVALN 170
Query: 173 SKMQETEG--WQKKFLSDGLHLTEEGNAVVHKEVVEV 207
Q+ G WQ + L+DGLH + +G + H E+++V
Sbjct: 171 KAFQQEGGDAWQ-QLLTDGLHFSGKGYKIFHDELLKV 206
>sp|O74648|IAH1_SCHPO Isoamyl acetate-hydrolyzing esterase OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=iah1 PE=2 SV=1
Length = 246
Score = 67.8 bits (164), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 103/227 (45%), Gaps = 24/227 (10%)
Query: 4 QIVLFGDSITQQSFGSAGWGAALADAYCRKADVLLRGYGGYNTRWALFLLHHIFPLDNSN 63
++ + GDSITQ+ F G+ A L + Y R+ V + G+ GY +R L L I PL+ +
Sbjct: 39 RLTIIGDSITQKGFTPGGYCAELMNFYQRRLRVDVWGFSGYTSRHVLRYLPEI-PLEIDS 97
Query: 64 PPVATTIFFGANDAALFGRTSERQHVPVEEYGDNLKIMVQHLKRLSPIMLVVLITPPPVD 123
+ +F G ND L T PV+E+ +NL L R P +++++P
Sbjct: 98 TKLL-IVFLGTNDCQL---TETGYMCPVDEFKNNL----LALTRPFPHSKIIIVSPGICT 149
Query: 124 EDGRMEYAKSLYGEKAMKLPERTNEMTGVYARQCIETAKDLGVPFIDLWSKMQETEGWQK 183
+D + + Y A + N+ +K I+L+ ++ ++ +
Sbjct: 150 KDICFKREQEPYVIAASETVNTLNK------------SKANSAGLINLY-EITKSYPTPE 196
Query: 184 KFLSDGLHLTEEGNAVVHKEVVEVFSVA--GLSSEEMPYDFPHHSQI 228
+DGLH + G +++ E+V S A L +P FPH S+I
Sbjct: 197 LLFTDGLHFSSLGYSLLFNEIVATISKAWPELLPNNLPLQFPHWSEI 243
>sp|P54451|YQEF_BACSU Uncharacterized lipoprotein YqeF OS=Bacillus subtilis (strain 168)
GN=yqeF PE=4 SV=1
Length = 243
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 91/219 (41%), Gaps = 27/219 (12%)
Query: 5 IVLFGDSITQQSF-------GSAGWGAALADAYCRKADVLLRGYGGYNTRWALFLLHHIF 57
+V FGDS T+ S + W L A D+L G GG T A L
Sbjct: 25 VVAFGDSNTRGSNWDYRDYPKAQQWVNILKTAERGNLDILNAGIGGQTTEDAR-LRFQTD 83
Query: 58 PLDNSNPPVATTIFFGANDAALFGRTSERQHVPVEEYGDNLKIMVQHLKR--LSPIMLVV 115
LD P I FG NDAA+ T + V + + +NL ++ ++ + PI++
Sbjct: 84 VLDQK--PKYLFIMFGTNDAAIL--TEGKPRVSKQRFRENLVYFIEESRKHGIKPILMTC 139
Query: 116 LITPPPVDEDGRME-YAKSLYGEKAMKLPERTNEMTGVYARQCIETAKDLGVPFIDLWSK 174
+ P ++ +G+ + S Y A + + Y + +K L VP +D W
Sbjct: 140 I---PIIEGNGKHHLFYYSRYQAAAFEPKGGARKWHNSYNDITRDVSKRLDVPLVDNWKH 196
Query: 175 MQETEGWQ---KKFLSDGL------HLTEEGNAVVHKEV 204
E +G + + + GL H+T +G +V++ +
Sbjct: 197 FIEADGGKATDEALIQSGLIDPSGNHMTPKGARIVYEGI 235
>sp|Q3IT24|RLME_NATPD Ribosomal RNA large subunit methyltransferase E OS=Natronomonas
pharaonis (strain DSM 2160 / ATCC 35678) GN=rlmE PE=3
SV=1
Length = 252
Score = 32.7 bits (73), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 44/100 (44%), Gaps = 11/100 (11%)
Query: 88 HVPVEEYGDNLKIMVQHLKRLSPIMLVVLITPPPVDEDGRMEYAKSLYGEKAMKLPERTN 147
V E G+ ++ L+R+ PI V + + ED E ++L GE + + +
Sbjct: 52 QVANELAGEAGTVVGVDLQRIDPIEGVETVRGD-MTEDATREKVRALVGEADVVISDMAP 110
Query: 148 EMTGVY----------ARQCIETAKDLGVPFIDLWSKMQE 177
MTG Y AR ETA DL P DL +K+ E
Sbjct: 111 NMTGEYSLDHARSVHLARMAFETALDLLAPNGDLVAKVFE 150
>sp|Q9JM83|CALM4_MOUSE Calmodulin-4 OS=Mus musculus GN=Calm4 PE=2 SV=2
Length = 148
Score = 32.7 bits (73), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 5/78 (6%)
Query: 78 ALFGRTSERQ--HVPVEEYGDNLKIMVQHLKRLSPIMLVVLITPPPVDEDGRMEYAKSLY 135
A F R + + H+ VEE GD +M Q K L L LI+ D DG++ + + L
Sbjct: 15 AAFNRFDKNKDGHISVEELGD---VMKQLGKNLPEKDLKALISKLDTDGDGKISFEEFLT 71
Query: 136 GEKAMKLPERTNEMTGVY 153
+ K R E+ V+
Sbjct: 72 AIEKYKKGHRAGELRAVF 89
>sp|Q96DN5|WDR67_HUMAN WD repeat-containing protein 67 OS=Homo sapiens GN=WDR67 PE=2 SV=2
Length = 1066
Score = 30.8 bits (68), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 27/48 (56%)
Query: 32 RKADVLLRGYGGYNTRWALFLLHHIFPLDNSNPPVATTIFFGANDAAL 79
++ +LL+GYG Y T++ +F+ + L ++ +T I G + A L
Sbjct: 413 KRLQILLKGYGEYPTKYRMFIWRSLLQLPENHTAFSTLIDKGTHVAFL 460
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.136 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 97,271,777
Number of Sequences: 539616
Number of extensions: 4065289
Number of successful extensions: 9136
Number of sequences better than 100.0: 16
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 9094
Number of HSP's gapped (non-prelim): 16
length of query: 247
length of database: 191,569,459
effective HSP length: 114
effective length of query: 133
effective length of database: 130,053,235
effective search space: 17297080255
effective search space used: 17297080255
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)