Your job contains 1 sequence.
>025874
MILKLNKLKLPLKWEHVAKIAGKGVAPGRLHVARAMVEAGHVENLKQAFARYLYDGGPAY
STGSEPLAEVAVQLIHRTGGLAVLAHPWALKNPAAIIRKLKDVGLHGLEVYRSDGKLVAY
TDLADTYGLLKLGGSDYHGRGGHGESELGSVKLPVLVLNDFLKVARPIWCGAIKEILESY
ADEPSDSNLSHITRYGRGKMLKRNYPLNCGKGLVDECLSLWLTNEERQSAEFEAIKLKLS
HVSINQG
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 025874
(247 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2043738 - symbol:AT2G13840 species:3702 "Arabi... 784 6.2e-78 1
UNIPROTKB|Q3Z644 - symbol:DET1610 "PHP domain N-terminal ... 215 1.2e-17 1
TIGR_CMR|DET_1610 - symbol:DET_1610 "PHP domain N-termina... 215 1.2e-17 1
UNIPROTKB|Q3A9Z4 - symbol:CHY_2227 "PHP domain protein" s... 166 3.0e-12 1
TIGR_CMR|CHY_2227 - symbol:CHY_2227 "PHP domain protein" ... 166 3.0e-12 1
UNIPROTKB|Q74D71 - symbol:GSU1448 "Metal-dependent phosph... 141 7.8e-08 1
TIGR_CMR|GSU_1448 - symbol:GSU_1448 "PHP domain protein" ... 141 7.8e-08 1
UNIPROTKB|Q8ECV6 - symbol:trpH "PHP family metal-dependen... 138 1.9e-07 1
TIGR_CMR|SO_3017 - symbol:SO_3017 "TrpH family protein" s... 138 1.9e-07 1
UNIPROTKB|Q9KSS9 - symbol:VC_1177 "Putative uncharacteriz... 118 5.8e-05 1
TIGR_CMR|VC_1177 - symbol:VC_1177 "conserved hypothetical... 118 5.8e-05 1
UNIPROTKB|P77766 - symbol:yciV "conserved protein" specie... 116 0.00010 1
UNIPROTKB|Q47YC5 - symbol:CPS_3521 "PHP domain protein" s... 116 0.00011 1
TIGR_CMR|CPS_3521 - symbol:CPS_3521 "PHP domain protein" ... 116 0.00011 1
UNIPROTKB|Q60BV5 - symbol:MCA0359 "PHP domain protein" sp... 113 0.00020 1
>TAIR|locus:2043738 [details] [associations]
symbol:AT2G13840 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0006260 "DNA replication" evidence=IEA;ISS] InterPro:IPR003141
InterPro:IPR004013 InterPro:IPR016195 Pfam:PF02811 SMART:SM00481
EMBL:CP002685 GO:GO:0003677 GO:GO:0006260 EMBL:AC006218
EMBL:AC006436 GO:GO:0003887 SUPFAM:SSF89550 KO:K07053
IPI:IPI00546711 PIR:C84511 RefSeq:NP_565360.1 UniGene:At.26505
ProteinModelPortal:Q9ZQI9 SMR:Q9ZQI9 STRING:Q9ZQI9
EnsemblPlants:AT2G13840.1 GeneID:815867 KEGG:ath:AT2G13840
TAIR:At2g13840 HOGENOM:HOG000239493 InParanoid:Q9ZQI9 OMA:MEYIAIC
PhylomeDB:Q9ZQI9 ProtClustDB:CLSN2688093 ArrayExpress:Q9ZQI9
Genevestigator:Q9ZQI9 Uniprot:Q9ZQI9
Length = 434
Score = 784 (281.0 bits), Expect = 6.2e-78, P = 6.2e-78
Identities = 146/231 (63%), Positives = 183/231 (79%)
Query: 14 WEHVAKIAGKGVAPGRLHVARAMVEAGHVENLKQAFARYLYDGGPAYSTGSEPLAEVAVQ 73
WEHV +IAGK VAPGR+HVARA++EAG+VENL+QAF +YL+DGGPAY+TG+EP+AE AV+
Sbjct: 193 WEHVTRIAGKDVAPGRMHVARALLEAGYVENLRQAFTKYLHDGGPAYATGTEPMAEEAVK 252
Query: 74 LIHRTGGLAVLAHPWALKNPAAIIRKLKDVGLHGLEVYRSDGKLVAYTDLADTYGLLKLX 133
LI +TGG+AVLAHPWALKN IIR+LKD GLHG+EVYRSDGKL +++LADTY LLKL
Sbjct: 253 LICKTGGVAVLAHPWALKNHVGIIRRLKDAGLHGVEVYRSDGKLEVFSELADTYNLLKLG 312
Query: 134 XXXXXXXXXXXESELGSVKLPVLVLNDFLKVARPIWCGAIKEILESYADEPSDSNLSHIT 193
ESELGSV LPV L DFL V RPIWC AIK + ++ D+PSDSNLS+I
Sbjct: 313 GSDYHGKGGRNESELGSVNLPVTALQDFLNVGRPIWCEAIKATMRAFLDQPSDSNLSNIL 372
Query: 194 RYGRGKMLKRNYPLNCGKGLVDECLSLWLTNEERQSAEFEAIKLKLSHVSI 244
R+ + ++LK N +CGK L+D CL++WLT++ER S +FEA++LKLS V I
Sbjct: 373 RFDKARILKGNSAWSCGKELMDRCLAIWLTSDERNSNDFEALRLKLSFVPI 423
>UNIPROTKB|Q3Z644 [details] [associations]
symbol:DET1610 "PHP domain N-terminal region family
protein" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003141
InterPro:IPR004013 InterPro:IPR016195 Pfam:PF02811 SMART:SM00481
GO:GO:0003677 GO:GO:0006260 EMBL:CP000027 GenomeReviews:CP000027_GR
GO:GO:0003887 SUPFAM:SSF89550 eggNOG:COG0613 KO:K07053 OMA:MEYIAIC
HOGENOM:HOG000248105 RefSeq:YP_182305.1 ProteinModelPortal:Q3Z644
STRING:Q3Z644 GeneID:3229067 KEGG:det:DET1610 PATRIC:21610232
ProtClustDB:CLSK836789 BioCyc:DETH243164:GJNF-1611-MONOMER
Uniprot:Q3Z644
Length = 287
Score = 215 (80.7 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 51/168 (30%), Positives = 87/168 (51%)
Query: 14 WEHVAKIAGKGVAPGRLHVARAMVEAGHVENLKQAFARYLYDGGPAYSTGSEPLAEVAVQ 73
W+ V++IAG+G GR H+A AM+E G+++N+ +AF +Y+ GGPAY + E AV+
Sbjct: 121 WQRVSEIAGEGTV-GRPHIATAMLEKGYIQNMGEAFDKYIGRGGPAYVERIKMNPEEAVR 179
Query: 74 LIHRTGGLAVLAHPWALKNPAAIIRKLKDVGLHGLEVYR---SDGKLVAYTDLADTYGLL 130
L+ GG+ V+AHP + + ++ +L GL GLE + + ++ LA + LL
Sbjct: 180 LVLSCGGIPVMAHPLTIMDHEPMVERLVQAGLMGLECHYGGFNPQQIDGLVKLAGKHHLL 239
Query: 131 KLXXXXXXXXXXXXESELGSVKLPVLVLNDFLKVARPIWCGAIKEILE 178
E+ +G ++P+ + AR I + E +E
Sbjct: 240 TTGGSDYHGLDELTETPIGGAEVPLQDAKKLIAKARQIKAKGLAEDME 287
>TIGR_CMR|DET_1610 [details] [associations]
symbol:DET_1610 "PHP domain N-terminal region family
protein" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003141
InterPro:IPR004013 InterPro:IPR016195 Pfam:PF02811 SMART:SM00481
GO:GO:0003677 GO:GO:0006260 EMBL:CP000027 GenomeReviews:CP000027_GR
GO:GO:0003887 SUPFAM:SSF89550 eggNOG:COG0613 KO:K07053 OMA:MEYIAIC
HOGENOM:HOG000248105 RefSeq:YP_182305.1 ProteinModelPortal:Q3Z644
STRING:Q3Z644 GeneID:3229067 KEGG:det:DET1610 PATRIC:21610232
ProtClustDB:CLSK836789 BioCyc:DETH243164:GJNF-1611-MONOMER
Uniprot:Q3Z644
Length = 287
Score = 215 (80.7 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 51/168 (30%), Positives = 87/168 (51%)
Query: 14 WEHVAKIAGKGVAPGRLHVARAMVEAGHVENLKQAFARYLYDGGPAYSTGSEPLAEVAVQ 73
W+ V++IAG+G GR H+A AM+E G+++N+ +AF +Y+ GGPAY + E AV+
Sbjct: 121 WQRVSEIAGEGTV-GRPHIATAMLEKGYIQNMGEAFDKYIGRGGPAYVERIKMNPEEAVR 179
Query: 74 LIHRTGGLAVLAHPWALKNPAAIIRKLKDVGLHGLEVYR---SDGKLVAYTDLADTYGLL 130
L+ GG+ V+AHP + + ++ +L GL GLE + + ++ LA + LL
Sbjct: 180 LVLSCGGIPVMAHPLTIMDHEPMVERLVQAGLMGLECHYGGFNPQQIDGLVKLAGKHHLL 239
Query: 131 KLXXXXXXXXXXXXESELGSVKLPVLVLNDFLKVARPIWCGAIKEILE 178
E+ +G ++P+ + AR I + E +E
Sbjct: 240 TTGGSDYHGLDELTETPIGGAEVPLQDAKKLIAKARQIKAKGLAEDME 287
>UNIPROTKB|Q3A9Z4 [details] [associations]
symbol:CHY_2227 "PHP domain protein" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003141 InterPro:IPR004013
InterPro:IPR016195 Pfam:PF02811 SMART:SM00481 GO:GO:0003677
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0006260 GO:GO:0003887
SUPFAM:SSF89550 eggNOG:COG0613 KO:K07053 RefSeq:YP_361040.1
ProteinModelPortal:Q3A9Z4 STRING:Q3A9Z4 GeneID:3726733
KEGG:chy:CHY_2227 PATRIC:21277521 HOGENOM:HOG000248105 OMA:TRAHYAR
ProtClustDB:CLSK2772296 BioCyc:CHYD246194:GJCN-2226-MONOMER
Uniprot:Q3A9Z4
Length = 278
Score = 166 (63.5 bits), Expect = 3.0e-12, P = 3.0e-12
Identities = 42/123 (34%), Positives = 67/123 (54%)
Query: 15 EHVAKIAGKGVAPGRLHVARAMVEAGHVENLKQAFARYLYDGGPAYSTGSEPLAEVAVQL 74
E V AG + GR H+AR +++ G+V ++++AF++YL G PAY + + A+ +
Sbjct: 118 EEVIAEAGGDIV-GRPHMARVLLKKGYVSSIEEAFSKYLGKGCPAYVPKEKLTPKQAINI 176
Query: 75 IHRTGGLAVLAHPWALKNP----AAIIRKLKDVGLHGLEVY---RSDGKLVAYTDLADTY 127
I + GGL LAHP L+ I+ +L GL G+E Y ++ + Y +LA Y
Sbjct: 177 IKKAGGLTFLAHPVYLEKDDEGLKKILEELISYGLDGIEAYYTYHNEEQTRLYLELAGKY 236
Query: 128 GLL 130
LL
Sbjct: 237 NLL 239
>TIGR_CMR|CHY_2227 [details] [associations]
symbol:CHY_2227 "PHP domain protein" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003141 InterPro:IPR004013
InterPro:IPR016195 Pfam:PF02811 SMART:SM00481 GO:GO:0003677
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0006260 GO:GO:0003887
SUPFAM:SSF89550 eggNOG:COG0613 KO:K07053 RefSeq:YP_361040.1
ProteinModelPortal:Q3A9Z4 STRING:Q3A9Z4 GeneID:3726733
KEGG:chy:CHY_2227 PATRIC:21277521 HOGENOM:HOG000248105 OMA:TRAHYAR
ProtClustDB:CLSK2772296 BioCyc:CHYD246194:GJCN-2226-MONOMER
Uniprot:Q3A9Z4
Length = 278
Score = 166 (63.5 bits), Expect = 3.0e-12, P = 3.0e-12
Identities = 42/123 (34%), Positives = 67/123 (54%)
Query: 15 EHVAKIAGKGVAPGRLHVARAMVEAGHVENLKQAFARYLYDGGPAYSTGSEPLAEVAVQL 74
E V AG + GR H+AR +++ G+V ++++AF++YL G PAY + + A+ +
Sbjct: 118 EEVIAEAGGDIV-GRPHMARVLLKKGYVSSIEEAFSKYLGKGCPAYVPKEKLTPKQAINI 176
Query: 75 IHRTGGLAVLAHPWALKNP----AAIIRKLKDVGLHGLEVY---RSDGKLVAYTDLADTY 127
I + GGL LAHP L+ I+ +L GL G+E Y ++ + Y +LA Y
Sbjct: 177 IKKAGGLTFLAHPVYLEKDDEGLKKILEELISYGLDGIEAYYTYHNEEQTRLYLELAGKY 236
Query: 128 GLL 130
LL
Sbjct: 237 NLL 239
>UNIPROTKB|Q74D71 [details] [associations]
symbol:GSU1448 "Metal-dependent phosphoesterase, PHP
family" species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003141 InterPro:IPR004013
InterPro:IPR016195 Pfam:PF02811 SMART:SM00481 GO:GO:0003677
GO:GO:0006260 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0003887
SUPFAM:SSF89550 KO:K07053 HOGENOM:HOG000248105 RefSeq:NP_952499.1
ProteinModelPortal:Q74D71 DNASU:2687782 GeneID:2687782
KEGG:gsu:GSU1448 PATRIC:22025739 OMA:GVPVTWE ProtClustDB:CLSK828358
BioCyc:GSUL243231:GH27-1427-MONOMER Uniprot:Q74D71
Length = 288
Score = 141 (54.7 bits), Expect = 7.8e-08, P = 7.8e-08
Identities = 44/128 (34%), Positives = 68/128 (53%)
Query: 14 WEHVAKIAGKGVAPGRLHVARAMVEAGHVENLKQAFARYLYDGG-PA-YSTGSEPLAEVA 71
++ V +AG V GR H+ R +V+ G+ +++ AF RYL P Y E +AE
Sbjct: 125 YDEVLSMAGGAV--GRPHIGRVLVDNGYARDMEDAFRRYLIPCNVPKRYMPAGEAIAE-- 180
Query: 72 VQLIHRTGGLAVLAHPWALKNPAA----IIRKLKDVGLHGLEVYRS----DGKLVAYTD- 122
I R GG++VLAHP + + ++ +L +GL GLEV+ + D L Y +
Sbjct: 181 ---IRRIGGVSVLAHPPTITDDRRRLRQVVEQLAQLGLDGLEVFNNLCFKDDML--YLER 235
Query: 123 LADTYGLL 130
LA+ +GLL
Sbjct: 236 LAEEFGLL 243
>TIGR_CMR|GSU_1448 [details] [associations]
symbol:GSU_1448 "PHP domain protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR003141 InterPro:IPR004013 InterPro:IPR016195
Pfam:PF02811 SMART:SM00481 GO:GO:0003677 GO:GO:0006260
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0003887
SUPFAM:SSF89550 KO:K07053 HOGENOM:HOG000248105 RefSeq:NP_952499.1
ProteinModelPortal:Q74D71 DNASU:2687782 GeneID:2687782
KEGG:gsu:GSU1448 PATRIC:22025739 OMA:GVPVTWE ProtClustDB:CLSK828358
BioCyc:GSUL243231:GH27-1427-MONOMER Uniprot:Q74D71
Length = 288
Score = 141 (54.7 bits), Expect = 7.8e-08, P = 7.8e-08
Identities = 44/128 (34%), Positives = 68/128 (53%)
Query: 14 WEHVAKIAGKGVAPGRLHVARAMVEAGHVENLKQAFARYLYDGG-PA-YSTGSEPLAEVA 71
++ V +AG V GR H+ R +V+ G+ +++ AF RYL P Y E +AE
Sbjct: 125 YDEVLSMAGGAV--GRPHIGRVLVDNGYARDMEDAFRRYLIPCNVPKRYMPAGEAIAE-- 180
Query: 72 VQLIHRTGGLAVLAHPWALKNPAA----IIRKLKDVGLHGLEVYRS----DGKLVAYTD- 122
I R GG++VLAHP + + ++ +L +GL GLEV+ + D L Y +
Sbjct: 181 ---IRRIGGVSVLAHPPTITDDRRRLRQVVEQLAQLGLDGLEVFNNLCFKDDML--YLER 235
Query: 123 LADTYGLL 130
LA+ +GLL
Sbjct: 236 LAEEFGLL 243
>UNIPROTKB|Q8ECV6 [details] [associations]
symbol:trpH "PHP family metal-dependent phosphoesterases
TrpH" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003141
InterPro:IPR004013 InterPro:IPR016195 Pfam:PF02811 SMART:SM00481
GO:GO:0003677 GO:GO:0006260 EMBL:AE014299 GenomeReviews:AE014299_GR
GO:GO:0003887 SUPFAM:SSF89550 HOGENOM:HOG000248104 KO:K07053
OMA:TRAHYAR RefSeq:NP_718585.1 ProteinModelPortal:Q8ECV6
GeneID:1170705 KEGG:son:SO_3017 PATRIC:23525670
ProtClustDB:CLSK906959 Uniprot:Q8ECV6
Length = 286
Score = 138 (53.6 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 36/101 (35%), Positives = 51/101 (50%)
Query: 14 WEHVAKIAGKGVAPGRLHVARAMVEAGHVENLKQAFARYLYDGGPAYSTGSEPLAEVAVQ 73
+E K+A G A R H AR + + GH ++ F RYL G Y + A++
Sbjct: 125 YEGAKKLAA-GAALSRGHYARWLADNGHAVDMPSVFKRYLARGKTGYVPNNWGDMASAIK 183
Query: 74 LIHRTGGLAVLAHPWALKNPAA----IIRKLKDVGLHGLEV 110
+IH GGLAVLAHP K A ++R+ K+ G +EV
Sbjct: 184 VIHNAGGLAVLAHPSGYKLSAKWLKRLVREFKEAGGDAMEV 224
>TIGR_CMR|SO_3017 [details] [associations]
symbol:SO_3017 "TrpH family protein" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] [GO:0008081 "phosphoric diester hydrolase activity"
evidence=ISS] InterPro:IPR003141 InterPro:IPR004013
InterPro:IPR016195 Pfam:PF02811 SMART:SM00481 GO:GO:0003677
GO:GO:0006260 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0003887
SUPFAM:SSF89550 HOGENOM:HOG000248104 KO:K07053 OMA:TRAHYAR
RefSeq:NP_718585.1 ProteinModelPortal:Q8ECV6 GeneID:1170705
KEGG:son:SO_3017 PATRIC:23525670 ProtClustDB:CLSK906959
Uniprot:Q8ECV6
Length = 286
Score = 138 (53.6 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 36/101 (35%), Positives = 51/101 (50%)
Query: 14 WEHVAKIAGKGVAPGRLHVARAMVEAGHVENLKQAFARYLYDGGPAYSTGSEPLAEVAVQ 73
+E K+A G A R H AR + + GH ++ F RYL G Y + A++
Sbjct: 125 YEGAKKLAA-GAALSRGHYARWLADNGHAVDMPSVFKRYLARGKTGYVPNNWGDMASAIK 183
Query: 74 LIHRTGGLAVLAHPWALKNPAA----IIRKLKDVGLHGLEV 110
+IH GGLAVLAHP K A ++R+ K+ G +EV
Sbjct: 184 VIHNAGGLAVLAHPSGYKLSAKWLKRLVREFKEAGGDAMEV 224
>UNIPROTKB|Q9KSS9 [details] [associations]
symbol:VC_1177 "Putative uncharacterized protein"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003141 InterPro:IPR004013
InterPro:IPR016195 Pfam:PF02811 SMART:SM00481 GO:GO:0003677
GO:GO:0006260 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0003887
SUPFAM:SSF89550 KO:K07053 OMA:QAWEQPQ PIR:D82233 RefSeq:NP_230822.1
ProteinModelPortal:Q9KSS9 DNASU:2614610 GeneID:2614610
KEGG:vch:VC1177 PATRIC:20081444 ProtClustDB:CLSK874244
Uniprot:Q9KSS9
Length = 290
Score = 118 (46.6 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 31/86 (36%), Positives = 42/86 (48%)
Query: 15 EHVAKIAGKGVAPGRLHVARAMVEAGHVENLKQAFARYLYDGGPAYSTGSEPLAEVAVQL 74
E V IA G R H A+ +V+ G+ N++Q F +YL P Y + AV
Sbjct: 121 EEVQHIAD-GAPITRAHFAKWLVDNGYATNMQQVFKKYLTRDNPGYVPPNWCSMSEAVSA 179
Query: 75 IHRTGGLAVLAHPWALKNPAAIIRKL 100
IH GG AVLAHP A +++L
Sbjct: 180 IHAAGGQAVLAHPGRYDLTAKWLKRL 205
>TIGR_CMR|VC_1177 [details] [associations]
symbol:VC_1177 "conserved hypothetical protein" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR003141
InterPro:IPR004013 InterPro:IPR016195 Pfam:PF02811 SMART:SM00481
GO:GO:0003677 GO:GO:0006260 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0003887 SUPFAM:SSF89550 KO:K07053 OMA:QAWEQPQ PIR:D82233
RefSeq:NP_230822.1 ProteinModelPortal:Q9KSS9 DNASU:2614610
GeneID:2614610 KEGG:vch:VC1177 PATRIC:20081444
ProtClustDB:CLSK874244 Uniprot:Q9KSS9
Length = 290
Score = 118 (46.6 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 31/86 (36%), Positives = 42/86 (48%)
Query: 15 EHVAKIAGKGVAPGRLHVARAMVEAGHVENLKQAFARYLYDGGPAYSTGSEPLAEVAVQL 74
E V IA G R H A+ +V+ G+ N++Q F +YL P Y + AV
Sbjct: 121 EEVQHIAD-GAPITRAHFAKWLVDNGYATNMQQVFKKYLTRDNPGYVPPNWCSMSEAVSA 179
Query: 75 IHRTGGLAVLAHPWALKNPAAIIRKL 100
IH GG AVLAHP A +++L
Sbjct: 180 IHAAGGQAVLAHPGRYDLTAKWLKRL 205
>UNIPROTKB|P77766 [details] [associations]
symbol:yciV "conserved protein" species:83333 "Escherichia
coli K-12" [GO:0006260 "DNA replication" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR003141 InterPro:IPR004013
InterPro:IPR016195 Pfam:PF02811 SMART:SM00481 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
GO:GO:0003677 GO:GO:0006260 GO:GO:0003887 SUPFAM:SSF89550
PIR:E64874 RefSeq:NP_415782.1 RefSeq:YP_489534.1
ProteinModelPortal:P77766 SMR:P77766 IntAct:P77766 PRIDE:P77766
EnsemblBacteria:EBESCT00000001903 EnsemblBacteria:EBESCT00000017316
GeneID:12931131 GeneID:945857 KEGG:ecj:Y75_p1240 KEGG:eco:b1266
PATRIC:32117790 EchoBASE:EB4005 EcoGene:EG14257 eggNOG:COG0613
HOGENOM:HOG000248104 KO:K07053 OMA:QAWEQPQ ProtClustDB:CLSK880131
BioCyc:EcoCyc:G6634-MONOMER BioCyc:ECOL316407:JW1258-MONOMER
Genevestigator:P77766 Uniprot:P77766
Length = 293
Score = 116 (45.9 bits), Expect = 0.00010, P = 0.00010
Identities = 29/83 (34%), Positives = 41/83 (49%)
Query: 18 AKIAGKGVAPGRLHVARAMVEAGHVENLKQAFARYLYDGGPAYSTGSEPLAEVAVQLIHR 77
A+ +G A R H AR +VE G ++ F +YL G Y E A+ +IH
Sbjct: 130 AQRLAQGGAVTRGHFARFLVECGKASSMADVFKKYLARGKTGYVPPQWCTIEQAIDVIHH 189
Query: 78 TGGLAVLAHPWALKNPAAIIRKL 100
+GG AVLAHP A +++L
Sbjct: 190 SGGKAVLAHPGRYNLSAKWLKRL 212
>UNIPROTKB|Q47YC5 [details] [associations]
symbol:CPS_3521 "PHP domain protein" species:167879
"Colwellia psychrerythraea 34H" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR003141 InterPro:IPR004013 InterPro:IPR016195
Pfam:PF02811 SMART:SM00481 GO:GO:0003677 GO:GO:0006260
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0003887
SUPFAM:SSF89550 eggNOG:COG0613 HOGENOM:HOG000248104 KO:K07053
OMA:TRAHYAR RefSeq:YP_270195.1 ProteinModelPortal:Q47YC5
STRING:Q47YC5 GeneID:3519891 KEGG:cps:CPS_3521 PATRIC:21469979
BioCyc:CPSY167879:GI48-3549-MONOMER Uniprot:Q47YC5
Length = 301
Score = 116 (45.9 bits), Expect = 0.00011, P = 0.00011
Identities = 35/99 (35%), Positives = 51/99 (51%)
Query: 20 IAGKGVAPGRLHVARAMVEAGHVENLKQAFARYLYDGGP----AYSTGSEPLAEVAVQLI 75
+AG+G R H A+ + + GHV ++QAF +Y+ G AY + E A+ I
Sbjct: 147 MAGEGSIT-RAHFAKVLHQQGHVSTMQQAFDKYIGKKGSKGQRAYVKPNWCSIEEAIVAI 205
Query: 76 HRTGGLAVLAHPWALKNPAAIIRKL----KDVGLHGLEV 110
H+ GG AV+AHP A +R+L +V GLEV
Sbjct: 206 HQAGGSAVMAHPIRYDLSAKWLRRLIVHFSEVSGDGLEV 244
>TIGR_CMR|CPS_3521 [details] [associations]
symbol:CPS_3521 "PHP domain protein" species:167879
"Colwellia psychrerythraea 34H" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR003141 InterPro:IPR004013 InterPro:IPR016195
Pfam:PF02811 SMART:SM00481 GO:GO:0003677 GO:GO:0006260
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0003887
SUPFAM:SSF89550 eggNOG:COG0613 HOGENOM:HOG000248104 KO:K07053
OMA:TRAHYAR RefSeq:YP_270195.1 ProteinModelPortal:Q47YC5
STRING:Q47YC5 GeneID:3519891 KEGG:cps:CPS_3521 PATRIC:21469979
BioCyc:CPSY167879:GI48-3549-MONOMER Uniprot:Q47YC5
Length = 301
Score = 116 (45.9 bits), Expect = 0.00011, P = 0.00011
Identities = 35/99 (35%), Positives = 51/99 (51%)
Query: 20 IAGKGVAPGRLHVARAMVEAGHVENLKQAFARYLYDGGP----AYSTGSEPLAEVAVQLI 75
+AG+G R H A+ + + GHV ++QAF +Y+ G AY + E A+ I
Sbjct: 147 MAGEGSIT-RAHFAKVLHQQGHVSTMQQAFDKYIGKKGSKGQRAYVKPNWCSIEEAIVAI 205
Query: 76 HRTGGLAVLAHPWALKNPAAIIRKL----KDVGLHGLEV 110
H+ GG AV+AHP A +R+L +V GLEV
Sbjct: 206 HQAGGSAVMAHPIRYDLSAKWLRRLIVHFSEVSGDGLEV 244
>UNIPROTKB|Q60BV5 [details] [associations]
symbol:MCA0359 "PHP domain protein" species:243233
"Methylococcus capsulatus str. Bath" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003141 InterPro:IPR004013
InterPro:IPR016195 Pfam:PF02811 SMART:SM00481 GO:GO:0003677
GO:GO:0006260 EMBL:AE017282 GenomeReviews:AE017282_GR GO:GO:0003887
SUPFAM:SSF89550 HOGENOM:HOG000248104 KO:K07053 OMA:TRAHYAR
RefSeq:YP_112891.1 ProteinModelPortal:Q60BV5 GeneID:3104707
KEGG:mca:MCA0359 PATRIC:22604461 Uniprot:Q60BV5
Length = 277
Score = 113 (44.8 bits), Expect = 0.00020, P = 0.00020
Identities = 37/118 (31%), Positives = 54/118 (45%)
Query: 20 IAGKGVAPGRLHVARAMVEAGHVENLKQAFARYLYDGGPAYSTGSEPLAEVAVQLIHRTG 79
+AG G+ R H ARA+V+ G ++ F ++L G P + AV I G
Sbjct: 123 LAGAGMVT-RTHFARALVQLGQAATVRDVFDKFLTQGKPGHVPTVWAEMTAAVGWIIEAG 181
Query: 80 GLAVLAHPWALKNPAAIIRKL----KDVGLHGLEVYRSDGK---LVAYTDLADTYGLL 130
G+AVLAHP K + I +L K G +EV + + A +A +GLL
Sbjct: 182 GVAVLAHPQRYKMTGSWIGRLAGDFKAAGGEAIEVVSGNATSSDIQANAAIARRHGLL 239
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.136 0.407 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 247 224 0.00099 112 3 11 22 0.41 33
32 0.40 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 15
No. of states in DFA: 604 (64 KB)
Total size of DFA: 176 KB (2102 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 17.17u 0.18s 17.35t Elapsed: 00:00:01
Total cpu time: 17.17u 0.18s 17.35t Elapsed: 00:00:01
Start: Sat May 11 06:14:04 2013 End: Sat May 11 06:14:05 2013