Query 025874
Match_columns 247
No_of_seqs 217 out of 1176
Neff 5.6
Searched_HMMs 29240
Date Mon Mar 25 19:32:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025874.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025874hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3o0f_A Putative metal-dependen 100.0 2E-40 6.8E-45 303.2 16.2 160 1-163 117-286 (301)
2 2yb1_A Amidohydrolase; HET: AM 100.0 4.7E-33 1.6E-37 251.3 13.1 163 1-172 106-276 (292)
3 3e38_A Two-domain protein cont 99.2 1.3E-11 4.4E-16 114.4 8.3 107 59-165 110-234 (343)
4 1m65_A Hypothetical protein YC 99.2 3.9E-11 1.3E-15 103.3 8.7 82 58-141 103-197 (245)
5 2wje_A CPS4B, tyrosine-protein 99.0 2.3E-10 7.9E-15 99.9 6.9 74 67-141 121-208 (247)
6 2yxo_A Histidinol phosphatase; 98.9 1.9E-09 6.4E-14 93.7 7.9 72 68-141 137-229 (267)
7 3qy7_A Tyrosine-protein phosph 98.9 1.3E-09 4.5E-14 97.1 7.0 75 66-141 116-199 (262)
8 2anu_A Hypothetical protein TM 98.6 2.9E-08 9.9E-13 86.9 5.1 72 65-141 131-210 (255)
9 2w9m_A Polymerase X; SAXS, DNA 98.0 8.5E-06 2.9E-10 79.8 6.4 70 69-141 440-521 (578)
10 3b0x_A DNA polymerase beta fam 97.2 0.00055 1.9E-08 66.8 7.2 71 69-141 452-534 (575)
11 3dcp_A Histidinol-phosphatase; 95.5 0.042 1.4E-06 48.9 8.2 76 70-151 162-268 (283)
12 1v77_A PH1877P, hypothetical p 93.6 0.15 5.1E-06 43.3 6.8 72 67-141 85-173 (212)
13 3ngf_A AP endonuclease, family 84.1 2.1 7.1E-05 36.2 6.4 42 92-133 24-66 (269)
14 3f4w_A Putative hexulose 6 pho 75.2 6.9 0.00024 31.9 6.6 63 70-132 42-107 (211)
15 4gbu_A NADPH dehydrogenase 1; 74.9 4.2 0.00014 37.6 5.8 23 67-89 97-121 (400)
16 3kws_A Putative sugar isomeras 74.8 5.8 0.0002 33.6 6.3 42 92-133 39-82 (287)
17 1k77_A EC1530, hypothetical pr 74.2 3.9 0.00013 33.9 4.9 41 93-133 17-58 (260)
18 3p6l_A Sugar phosphate isomera 73.7 6.9 0.00024 32.6 6.4 42 93-134 24-82 (262)
19 3lmz_A Putative sugar isomeras 73.5 6.4 0.00022 32.8 6.1 41 93-133 32-79 (257)
20 3dx5_A Uncharacterized protein 72.4 4.2 0.00015 34.3 4.8 42 93-134 17-67 (286)
21 2q02_A Putative cytoplasmic pr 71.1 13 0.00045 30.7 7.5 14 66-79 19-32 (272)
22 3vni_A Xylose isomerase domain 70.0 5.4 0.00019 33.7 4.9 41 93-133 19-65 (294)
23 2d73_A Alpha-glucosidase SUSB; 69.6 16 0.00056 36.8 8.9 77 62-143 414-512 (738)
24 2qul_A D-tagatose 3-epimerase; 69.1 6.8 0.00023 32.9 5.3 42 93-134 19-66 (290)
25 4e38_A Keto-hydroxyglutarate-a 68.8 17 0.00059 31.3 7.9 59 68-127 24-83 (232)
26 3a24_A Alpha-galactosidase; gl 68.4 16 0.00055 36.2 8.5 78 62-143 343-429 (641)
27 3l23_A Sugar phosphate isomera 67.4 8 0.00027 33.5 5.5 42 93-134 31-78 (303)
28 2zvr_A Uncharacterized protein 65.8 9.7 0.00033 32.3 5.7 40 93-132 43-85 (290)
29 1qwg_A PSL synthase;, (2R)-pho 65.5 12 0.0004 33.1 6.1 65 68-132 57-131 (251)
30 3qc0_A Sugar isomerase; TIM ba 65.4 4.3 0.00015 33.8 3.3 40 93-132 20-62 (275)
31 3cny_A Inositol catabolism pro 64.8 6.8 0.00023 33.1 4.5 64 65-130 30-105 (301)
32 3ktc_A Xylose isomerase; putat 64.5 8.2 0.00028 33.8 5.1 41 93-133 35-79 (333)
33 2g0w_A LMO2234 protein; putati 64.1 16 0.00056 31.1 6.9 40 94-133 39-86 (296)
34 1i60_A IOLI protein; beta barr 64.1 11 0.00038 31.1 5.6 14 66-79 14-27 (278)
35 1z41_A YQJM, probable NADH-dep 63.7 14 0.00046 33.1 6.5 22 68-89 85-108 (338)
36 3gr7_A NADPH dehydrogenase; fl 62.0 11 0.00038 34.0 5.5 24 66-89 83-108 (340)
37 3tva_A Xylose isomerase domain 61.6 12 0.0004 31.6 5.4 46 94-139 24-76 (290)
38 4ab4_A Xenobiotic reductase B; 60.7 14 0.00049 33.7 6.1 23 67-89 80-104 (362)
39 3cqj_A L-ribulose-5-phosphate 60.6 12 0.00042 31.6 5.4 42 92-133 31-84 (295)
40 1icp_A OPR1, 12-oxophytodienoa 60.4 14 0.00049 33.7 6.1 22 68-89 93-116 (376)
41 4a3u_A NCR, NADH\:flavin oxido 59.5 12 0.00041 33.9 5.3 23 67-89 80-104 (358)
42 3obe_A Sugar phosphate isomera 59.4 13 0.00045 32.2 5.4 42 93-134 38-95 (305)
43 2zds_A Putative DNA-binding pr 59.2 24 0.00081 30.3 7.0 42 92-133 16-69 (340)
44 3gka_A N-ethylmaleimide reduct 59.2 16 0.00054 33.4 6.1 23 67-89 88-112 (361)
45 3l5a_A NADH/flavin oxidoreduct 58.4 13 0.00044 34.7 5.5 24 66-89 104-129 (419)
46 3k30_A Histamine dehydrogenase 57.0 16 0.00054 35.6 6.1 23 67-89 90-114 (690)
47 3kru_A NADH:flavin oxidoreduct 56.7 18 0.00062 32.7 6.1 23 67-89 82-106 (343)
48 3aam_A Endonuclease IV, endoiv 56.4 14 0.00049 30.8 5.0 41 93-133 16-68 (270)
49 3tjl_A NADPH dehydrogenase; OL 55.5 22 0.00075 33.2 6.5 23 67-89 93-117 (407)
50 2x7v_A Probable endonuclease 4 55.0 15 0.00051 30.6 4.9 40 92-131 13-63 (287)
51 3u0h_A Xylose isomerase domain 55.0 9.9 0.00034 31.6 3.7 40 93-132 18-64 (281)
52 2hk0_A D-psicose 3-epimerase; 53.2 12 0.00042 32.0 4.1 43 93-136 39-87 (309)
53 3aal_A Probable endonuclease 4 53.1 26 0.00089 29.9 6.2 41 93-133 20-72 (303)
54 1vhc_A Putative KHG/KDPG aldol 53.1 69 0.0024 27.0 8.8 65 66-131 5-71 (224)
55 1ps9_A 2,4-dienoyl-COA reducta 52.3 18 0.0006 35.1 5.5 23 67-89 82-106 (671)
56 3l5l_A Xenobiotic reductase A; 52.2 25 0.00085 31.8 6.2 44 68-111 82-178 (363)
57 1o94_A Tmadh, trimethylamine d 52.2 18 0.0006 35.7 5.5 23 67-89 85-109 (729)
58 1yx1_A Hypothetical protein PA 51.6 14 0.00048 30.8 4.2 38 95-132 27-68 (264)
59 1qtw_A Endonuclease IV; DNA re 50.7 24 0.00083 29.3 5.5 40 92-131 13-63 (285)
60 3hgj_A Chromate reductase; TIM 49.6 23 0.00079 31.8 5.5 44 68-111 83-172 (349)
61 2qw5_A Xylose isomerase-like T 49.5 27 0.00093 30.2 5.8 40 95-134 35-87 (335)
62 1o66_A 3-methyl-2-oxobutanoate 48.3 1.1E+02 0.0038 27.0 9.6 96 40-139 89-210 (275)
63 3qxb_A Putative xylose isomera 47.8 26 0.0009 30.0 5.4 40 95-134 39-89 (316)
64 1m3u_A 3-methyl-2-oxobutanoate 45.3 1.6E+02 0.0053 25.9 10.0 95 40-139 89-210 (264)
65 3kts_A Glycerol uptake operon 42.9 79 0.0027 26.5 7.4 77 49-131 22-104 (192)
66 2hnh_A DNA polymerase III alph 41.6 23 0.0008 36.4 4.6 64 77-140 125-205 (910)
67 2ftp_A Hydroxymethylglutaryl-C 41.1 64 0.0022 28.2 6.9 92 30-132 33-141 (302)
68 1u83_A Phosphosulfolactate syn 40.2 54 0.0018 29.2 6.2 63 68-131 82-154 (276)
69 1bxb_A Xylose isomerase; xylos 40.1 30 0.001 31.1 4.7 42 92-133 34-87 (387)
70 1xla_A D-xylose isomerase; iso 39.4 21 0.00073 32.2 3.6 42 93-134 35-88 (394)
71 2hpi_A DNA polymerase III alph 39.4 23 0.0008 37.7 4.3 72 66-140 127-216 (1220)
72 1muw_A Xylose isomerase; atomi 38.7 28 0.00097 31.2 4.3 42 93-134 35-88 (386)
73 1mxs_A KDPG aldolase; 2-keto-3 38.6 1.3E+02 0.0043 25.4 8.2 59 68-127 16-75 (225)
74 3inp_A D-ribulose-phosphate 3- 38.1 66 0.0022 27.8 6.4 70 59-130 65-136 (246)
75 1xim_A D-xylose isomerase; iso 38.1 28 0.00095 31.4 4.2 40 93-132 35-86 (393)
76 3ks6_A Glycerophosphoryl diest 37.5 20 0.00067 30.5 2.9 43 68-114 193-235 (250)
77 1wbh_A KHG/KDPG aldolase; lyas 36.5 1E+02 0.0035 25.7 7.2 61 70-131 8-70 (214)
78 2hsa_B 12-oxophytodienoate red 36.3 57 0.002 30.0 6.0 22 68-89 95-118 (402)
79 1vkf_A Glycerol uptake operon 35.3 1.2E+02 0.0042 25.2 7.4 60 66-131 43-105 (188)
80 1vyr_A Pentaerythritol tetrani 35.1 63 0.0022 29.2 6.1 22 68-89 83-106 (364)
81 2r14_A Morphinone reductase; H 34.1 62 0.0021 29.5 5.8 21 68-88 87-109 (377)
82 2eja_A URO-D, UPD, uroporphyri 33.9 42 0.0014 29.5 4.5 64 66-136 217-280 (338)
83 2ktl_A Tyrosyl-tRNA synthetase 33.8 25 0.00087 28.9 2.8 30 32-63 52-81 (164)
84 2czd_A Orotidine 5'-phosphate 33.6 62 0.0021 26.4 5.3 92 44-136 66-165 (208)
85 2gou_A Oxidoreductase, FMN-bin 33.5 54 0.0019 29.6 5.3 23 67-89 82-106 (365)
86 1xx1_A Smase I, sphingomyelina 32.8 26 0.00088 30.0 2.9 27 81-110 7-33 (285)
87 2d59_A Hypothetical protein PH 32.7 58 0.002 25.2 4.7 50 81-133 80-129 (144)
88 3t7v_A Methylornithine synthas 31.3 39 0.0013 29.7 3.9 63 69-133 129-206 (350)
89 3kbb_A Phosphorylated carbohyd 31.3 61 0.0021 25.2 4.7 119 4-129 26-155 (216)
90 3d3a_A Beta-galactosidase; pro 31.0 58 0.002 31.9 5.4 50 86-135 30-96 (612)
91 1m5w_A Pyridoxal phosphate bio 30.2 1.7E+02 0.0058 25.5 7.6 68 69-140 117-198 (243)
92 4e8d_A Glycosyl hydrolase, fam 30.2 64 0.0022 31.7 5.5 50 85-134 24-90 (595)
93 1nvm_A HOA, 4-hydroxy-2-oxoval 29.9 1.7E+02 0.0056 26.0 7.9 102 29-139 32-145 (345)
94 3thd_A Beta-galactosidase; TIM 29.8 77 0.0026 31.5 6.0 50 85-134 32-98 (654)
95 2p10_A MLL9387 protein; putati 29.6 71 0.0024 28.6 5.2 65 66-133 80-168 (286)
96 3ctl_A D-allulose-6-phosphate 28.4 96 0.0033 26.2 5.8 69 60-130 38-108 (231)
97 2vc7_A Aryldialkylphosphatase; 28.3 62 0.0021 27.4 4.6 49 56-105 164-217 (314)
98 2ekc_A AQ_1548, tryptophan syn 28.0 2.2E+02 0.0074 24.2 8.0 20 95-114 35-54 (262)
99 1oy0_A Ketopantoate hydroxymet 27.9 2.9E+02 0.0098 24.4 8.9 97 40-139 106-228 (281)
100 2f6k_A Metal-dependent hydrola 27.4 1.3E+02 0.0046 25.0 6.5 63 70-132 79-152 (307)
101 3flu_A DHDPS, dihydrodipicolin 27.2 3E+02 0.01 23.7 9.2 67 65-131 56-136 (297)
102 3ajx_A 3-hexulose-6-phosphate 27.1 1.8E+02 0.0061 23.1 7.0 67 70-138 42-111 (207)
103 3i5g_C Myosin catalytic light 26.5 2.1E+02 0.0073 21.7 7.7 70 4-79 36-115 (159)
104 4h3v_A Oxidoreductase domain p 26.5 1.1E+02 0.0037 26.4 5.9 58 47-104 90-154 (390)
105 3tha_A Tryptophan synthase alp 26.3 1E+02 0.0035 26.7 5.6 74 45-129 61-142 (252)
106 3ff4_A Uncharacterized protein 25.9 68 0.0023 24.5 3.9 91 31-139 22-114 (122)
107 3qze_A DHDPS, dihydrodipicolin 25.7 3.2E+02 0.011 23.9 8.9 67 65-131 72-152 (314)
108 3na8_A Putative dihydrodipicol 25.3 3.3E+02 0.011 23.9 8.9 88 65-161 73-174 (315)
109 3jr2_A Hexulose-6-phosphate sy 24.6 1.9E+02 0.0065 23.5 6.8 58 70-129 48-110 (218)
110 3og2_A Beta-galactosidase; TIM 24.6 71 0.0024 33.3 4.8 51 84-134 46-114 (1003)
111 3tak_A DHDPS, dihydrodipicolin 24.0 3.2E+02 0.011 23.5 8.5 68 65-132 50-131 (291)
112 2oog_A Glycerophosphoryl diest 24.0 81 0.0028 27.0 4.5 41 69-113 231-271 (287)
113 3gk0_A PNP synthase, pyridoxin 23.5 2.4E+02 0.0082 25.1 7.4 69 68-140 144-226 (278)
114 3gna_A RAG-1, V(D)J recombinat 23.5 32 0.0011 25.3 1.5 27 209-235 55-86 (96)
115 3l12_A Putative glycerophospho 23.4 1.1E+02 0.0039 26.5 5.4 53 69-129 258-310 (313)
116 1uas_A Alpha-galactosidase; TI 23.3 1.7E+02 0.0058 26.0 6.7 49 64-112 71-131 (362)
117 3si9_A DHDPS, dihydrodipicolin 23.1 3.8E+02 0.013 23.4 9.4 66 66-131 72-151 (315)
118 3bdk_A D-mannonate dehydratase 23.1 61 0.0021 29.8 3.7 17 118-134 107-123 (386)
119 2dvt_A Thermophilic reversible 23.0 2E+02 0.0069 24.1 6.9 64 69-132 82-162 (327)
120 3l21_A DHDPS, dihydrodipicolin 22.6 3.8E+02 0.013 23.3 8.8 67 65-131 64-144 (304)
121 3daq_A DHDPS, dihydrodipicolin 22.5 3.7E+02 0.013 23.1 8.9 53 79-131 70-131 (292)
122 3ch0_A Glycerophosphodiester p 21.6 1.1E+02 0.0038 25.7 4.9 41 69-113 226-266 (272)
123 2o55_A Putative glycerophospho 21.6 98 0.0034 25.9 4.5 43 69-114 202-247 (258)
124 3qvq_A Phosphodiesterase OLEI0 21.4 80 0.0027 26.5 3.9 42 69-114 200-241 (252)
125 3lab_A Putative KDPG (2-keto-3 21.2 2.1E+02 0.0071 24.3 6.4 52 76-128 11-63 (217)
126 3ovp_A Ribulose-phosphate 3-ep 21.2 1.6E+02 0.0054 24.7 5.7 68 60-129 43-113 (228)
127 2r8w_A AGR_C_1641P; APC7498, d 20.9 3.7E+02 0.013 23.8 8.4 67 65-131 83-163 (332)
128 1tqj_A Ribulose-phosphate 3-ep 20.8 2E+02 0.0067 23.9 6.2 69 60-130 43-114 (230)
129 2gwg_A 4-oxalomesaconate hydra 20.7 3E+02 0.01 23.6 7.7 62 71-132 96-176 (350)
130 4ggi_A UDP-2,3-diacylglucosami 20.7 1.5E+02 0.0052 25.7 5.6 40 94-133 234-276 (283)
131 3mz2_A Glycerophosphoryl diest 20.4 2E+02 0.0068 24.9 6.4 47 67-114 216-269 (292)
132 1tz9_A Mannonate dehydratase; 20.4 72 0.0025 28.2 3.5 17 118-134 98-114 (367)
133 3eb2_A Putative dihydrodipicol 20.3 3.7E+02 0.013 23.2 8.2 89 65-162 53-155 (300)
134 3nav_A Tryptophan synthase alp 20.1 2.8E+02 0.0095 24.0 7.2 63 45-129 7-79 (271)
135 2ffi_A 2-pyrone-4,6-dicarboxyl 20.1 2.2E+02 0.0075 23.5 6.4 60 69-132 70-141 (288)
No 1
>3o0f_A Putative metal-dependent phosphoesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: AMP; 1.94A {Bifidobacterium adolescentis} PDB: 3e0f_A*
Probab=100.00 E-value=2e-40 Score=303.23 Aligned_cols=160 Identities=28% Similarity=0.430 Sum_probs=143.8
Q ss_pred ChHHHhhCCCCCCHHHHHHHhCCC--CCCCHHHHHHHHHHcCCCCCHHHHHHHHhhCCCCceeCCCCCCHHHHHHHHHHc
Q 025874 1 MILKLNKLKLPLKWEHVAKIAGKG--VAPGRLHVARAMVEAGHVENLKQAFARYLYDGGPAYSTGSEPLAEVAVQLIHRT 78 (247)
Q Consensus 1 ii~kL~~~G~~I~~eev~~~a~~~--~~igRpHIA~aLv~~G~v~~~~eaF~~yL~~g~payv~~~~~~~~EaI~~Ih~a 78 (247)
|+++|+++ ++|+||+|++.++++ ..+||||||++||++||+++++++|++||++|+|+|||..+++++|+|++||++
T Consensus 117 i~~~L~~~-~~i~~e~v~~~a~~~~~~~igR~HiA~~Lv~~G~~~~~~~aF~~~l~~g~~~yV~~~~~~~~eaI~~I~~a 195 (301)
T 3o0f_A 117 MVERLSQD-FPITWDDVLAQVKEGERTTIGRPHIADALVAAGVYETRSDAFADAVSAKSKYYIPTPSPSTHEVIAAVKGA 195 (301)
T ss_dssp HHHHHHHH-SSCCHHHHHTTCTTGGGSCCCHHHHHHHHHHTTSCSSHHHHHTTTTSTTSTTCCCCCCCBHHHHHHHHHHT
T ss_pred HHHHHHHH-CCCCHHHHHHHhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHcCCCccccCccCCCHHHHHHHHHHC
Confidence 68899999 999999999887532 369999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEecCCcCCC-----ChHHHHHHHHHcCCcEEEEecCcc---cHHHHHHHHHHcCCceeecCCCCCCCCCCCccccC
Q 025874 79 GGLAVLAHPWALK-----NPAAIIRKLKDVGLHGLEVYRSDG---KLVAYTDLADTYGLLKLGGSDYHGRGGHGESELGS 150 (247)
Q Consensus 79 GGvaVLAHP~~~~-----~~~~li~~l~~~GlDGIEv~~~~~---~~~~~~~lA~~~gLl~TGGSDfHG~~~~~~~~lG~ 150 (247)
||++|||||+++. ...+++.+|++.|+|||||||+++ +++++.++|+++||++||||||||+. + +..+|.
T Consensus 196 GGvaVLAHP~r~~~~r~~~~~~~l~~l~~~GldgIEv~~~~~~~~~~~~~~~lA~~~gL~~tgGSD~Hg~~-~-~~~lG~ 273 (301)
T 3o0f_A 196 GGVVVAAHAGDPQRNRRLLSDEQLDAMIADGLDGLEVWHRGNPPEQRERLLTIAARHDLLVTGGSDWHGKG-K-PNGLGE 273 (301)
T ss_dssp TCEEEECSTTCTTTCSSCCCHHHHHHHHHHTCCEEEEESTTSCHHHHHHHHHHHHHHTCEEEECCCBCGGG-S-SCCTTS
T ss_pred CCEEEecChhhhccccccCcHHHHHHHHHCCCCEEEEeCCCCCHHHHHHHHHHHHHcCCceEEEcCCCCCC-C-CCcCCC
Confidence 9999999997653 246789999999999999999876 56899999999999999999999974 3 468999
Q ss_pred ccCCHHHHHHHhc
Q 025874 151 VKLPVLVLNDFLK 163 (247)
Q Consensus 151 ~~ip~~~l~~i~~ 163 (247)
+.+|++.++.|++
T Consensus 274 ~~~~~~~~~~l~~ 286 (301)
T 3o0f_A 274 NLTDDDTVREILC 286 (301)
T ss_dssp SCBCHHHHHHHHH
T ss_pred cCCCHHHHHHHHH
Confidence 9999987776654
No 2
>2yb1_A Amidohydrolase; HET: AMP; 1.90A {Chromobacterium violaceum} PDB: 2yb4_A
Probab=100.00 E-value=4.7e-33 Score=251.35 Aligned_cols=163 Identities=29% Similarity=0.488 Sum_probs=139.7
Q ss_pred ChHHHhhCCCCCCHHHHHHHhCCCCCCCHHHHHHHHHHcCCCCCHHHHHHHHhhCCCCceeCCCCCCHHHHHHHHHHcCC
Q 025874 1 MILKLNKLKLPLKWEHVAKIAGKGVAPGRLHVARAMVEAGHVENLKQAFARYLYDGGPAYSTGSEPLAEVAVQLIHRTGG 80 (247)
Q Consensus 1 ii~kL~~~G~~I~~eev~~~a~~~~~igRpHIA~aLv~~G~v~~~~eaF~~yL~~g~payv~~~~~~~~EaI~~Ih~aGG 80 (247)
|+++|++.|++++++++.+.+.++..+||||||++|++.||+++..++|++||+.++|+|+|..+++++++|++|+++||
T Consensus 106 ~~~~l~~~g~~~~~~~v~~~a~~~~~igr~H~a~~lv~~g~~~~~~~~f~~yl~~~~~~~v~~~~~~~~~~i~~i~~~Gg 185 (292)
T 2yb1_A 106 MGASLEAAGIAGCFDGAMRWCDNPEMISRTHFARHLVDSGAVKDMRTVFRKYLTPGKPGYVSHQWASLEDAVGWIVGAGG 185 (292)
T ss_dssp HHHHHHHTTCTTHHHHHHTTCSSGGGCCHHHHHHHHHHTTSSSSHHHHHHHSSSTTSTTCCCCCCBCHHHHHHHHHHTTC
T ss_pred HHHHHHHcCCCcCHHHHHHhccCCCCcCHHHHHHHHHHcCCcCCHHHHHHHHHccCCceeccCCCCCHHHHHHHHHHcCC
Confidence 45788999999999999988655457899999999999999999999999999999999999999999999999999999
Q ss_pred eEEecCCcCCCC----hHHHHHHHHHcCCcEEEEecCcc---cHHHHHHHHHHcCCceeecCCCCCCCCCCCccccCcc-
Q 025874 81 LAVLAHPWALKN----PAAIIRKLKDVGLHGLEVYRSDG---KLVAYTDLADTYGLLKLGGSDYHGRGGHGESELGSVK- 152 (247)
Q Consensus 81 vaVLAHP~~~~~----~~~li~~l~~~GlDGIEv~~~~~---~~~~~~~lA~~~gLl~TGGSDfHG~~~~~~~~lG~~~- 152 (247)
++|+|||+++.. ..++++++++.|++||||+++++ ++..+.++|+++||++|+|||||++. +++..+|...
T Consensus 186 ~~VlAHP~r~~~~~~~~~~~l~~l~~~g~~giEv~~~~~~~~~~~~~~~~a~~~gl~~t~GSDaH~~~-~~~~~lG~~~~ 264 (292)
T 2yb1_A 186 MAVIAHPGRYDMGRTLIERLILDFQAAGGQGIEVASGSHSLDDMHKFALHADRHGLYASSGSDFHAPG-EGGRDVGHTED 264 (292)
T ss_dssp EEEECCGGGSSCCHHHHHHHHHHHHHTTCCEEEEEETTCCHHHHHHHHHHHHHHTCEEEEECCBCSTT-C---CTTCCCC
T ss_pred EEEEECcCccccchhhHHHHHHHHHhCCCCEEEEeCCCCCHHHHHHHHHHHHHcCCceEEeeCCCCcC-CCCCcCCCCCC
Confidence 999999998763 24678888889999999999876 36789999999999999999999985 3566899874
Q ss_pred CCHHHHHHHhccccccchhH
Q 025874 153 LPVLVLNDFLKVARPIWCGA 172 (247)
Q Consensus 153 ip~~~l~~i~~~~~piw~~~ 172 (247)
+|. ...++|..|
T Consensus 265 ~~~--------~~~~~~~~~ 276 (292)
T 2yb1_A 265 LPP--------ICRPIWREL 276 (292)
T ss_dssp CCT--------TCCBHHHHS
T ss_pred ChH--------HHHHHHHHH
Confidence 343 346666554
No 3
>3e38_A Two-domain protein containing predicted PHP-like dependent phosphoesterase; structural genomics; 2.20A {Bacteroides vulgatus atcc 8482}
Probab=99.24 E-value=1.3e-11 Score=114.44 Aligned_cols=107 Identities=15% Similarity=0.028 Sum_probs=77.3
Q ss_pred ceeCCCCCCHHHHHHHHHHcCCeEEecCCcCCCC-h-----HHHHHHHH-HcCCcEEEEecCcccHHHHHHHHHHcCCce
Q 025874 59 AYSTGSEPLAEVAVQLIHRTGGLAVLAHPWALKN-P-----AAIIRKLK-DVGLHGLEVYRSDGKLVAYTDLADTYGLLK 131 (247)
Q Consensus 59 ayv~~~~~~~~EaI~~Ih~aGGvaVLAHP~~~~~-~-----~~li~~l~-~~GlDGIEv~~~~~~~~~~~~lA~~~gLl~ 131 (247)
.+.|....+++++++.+++.||++|+|||++... . ..-++++. ..++|||||||+...+.++.++|+.++|..
T Consensus 110 ~~~~~~~~~~~eli~~v~~~Ggl~iiAHP~r~~~~~~g~~~~~~~~e~l~~~~iDaIEv~N~~~~n~~A~~la~~~~l~~ 189 (343)
T 3e38_A 110 DSNPLEQKDYKDAFREAKKQGAFMFWNHPGWDSQQPDTTKWWPEHTALYQEGCMHGIEVANGHLYMPEAIQWCLDKNLTM 189 (343)
T ss_dssp CSGGGCCSSHHHHHHHHHHTTCEEEECCTTCTTTSSSCCCCCHHHHHHHHTTCCSEEEEEETTEECTHHHHHHHHHTCEE
T ss_pred CCCCCcccCHHHHHHHHHHCCCEEEEeCCCCcccCccccccccchHHHhcccCccEEEEcCCCCccHHHHHHHhhCCCce
Confidence 3455557899999999999999999999998531 0 01134444 378999999998865667789999999999
Q ss_pred eecCCCCCCCCC---CCccccCc--------cCCHHHHHHHhccc
Q 025874 132 LGGSDYHGRGGH---GESELGSV--------KLPVLVLNDFLKVA 165 (247)
Q Consensus 132 TGGSDfHG~~~~---~~~~lG~~--------~ip~~~l~~i~~~~ 165 (247)
+||||+|++... .+..+|+. ..+.+++++|+++.
T Consensus 190 ~~GSDaH~~~~~~y~~~~~iGr~~T~v~~~~~S~e~ll~ALr~Gr 234 (343)
T 3e38_A 190 IGTSDIHQPIQTDYDFEKGEHRTMTFVFAKERSLQGIREALDNRR 234 (343)
T ss_dssp EEECCBCSCHHHHCCGGGTCCCCEEEEEESSSSHHHHHHHHHTTC
T ss_pred EeECCCCCCcccccccccccccceEEEecCCCCHHHHHHHHHcCC
Confidence 999999997200 11234543 13566788888743
No 4
>1m65_A Hypothetical protein YCDX; structural genomics, beta-alpha-barrel, metallo-enzyme, STRU function project, S2F, unknown function; 1.57A {Escherichia coli} SCOP: c.6.3.1 PDB: 1m68_A 1pb0_A
Probab=99.19 E-value=3.9e-11 Score=103.28 Aligned_cols=82 Identities=18% Similarity=0.199 Sum_probs=65.1
Q ss_pred CceeCCCC-CCHHHHHHHHHHcCCeEEecCCcCCC---ChHHHHHHHHHcCCcEEEEecCcc---------cHHHHHHHH
Q 025874 58 PAYSTGSE-PLAEVAVQLIHRTGGLAVLAHPWALK---NPAAIIRKLKDVGLHGLEVYRSDG---------KLVAYTDLA 124 (247)
Q Consensus 58 payv~~~~-~~~~EaI~~Ih~aGGvaVLAHP~~~~---~~~~li~~l~~~GlDGIEv~~~~~---------~~~~~~~lA 124 (247)
++|.|... ..+++++++++ +||++|+|||.++. ....+++.+++.| ++||+++++. ....+.++|
T Consensus 103 ~~~~~~~~~~~~~~~~~~i~-~g~~~vlaHp~~~~~~~~~~~~~~~~~~~g-~~iEvn~~~~~~~~~g~~~~~~~~~~~~ 180 (245)
T 1m65_A 103 PVFAPHDKATNTQAMIATIA-SGNVHIISHPGNPKYEIDVKAVAEAAAKHQ-VALEINNSSFLHSRKGSEDNCREVAAAV 180 (245)
T ss_dssp TTSCCCCHHHHHHHHHHHHH-TSCCSEECCTTCTTSCCCHHHHHHHHHHHT-CEEEEETTC----------CHHHHHHHH
T ss_pred CccCcchHHHHHHHHHHHHh-CCCCCEEECCCCccchhHHHHHHHHHHHcC-CEEEEECCCCcccCCCCCCchHHHHHHH
Confidence 34544432 45678899898 99999999998754 2356788898999 7999998753 357888999
Q ss_pred HHcCCceeecCCCCCCC
Q 025874 125 DTYGLLKLGGSDYHGRG 141 (247)
Q Consensus 125 ~~~gLl~TGGSDfHG~~ 141 (247)
+++|+.+|+|||+|++.
T Consensus 181 ~~~g~~~~~gSDaH~~~ 197 (245)
T 1m65_A 181 RDAGGWVALGSDSHTAF 197 (245)
T ss_dssp HHHTCCEEEECCBSSGG
T ss_pred HHcCCEEEEECCCCChH
Confidence 99999999999999974
No 5
>2wje_A CPS4B, tyrosine-protein phosphatase CPSB; capsule biogenesis/degradation, manganese, hydrolase, exopolysaccharide synthesis; 1.90A {Streptococcus pneumoniae} PDB: 2wjd_A 2wjf_A 3qy8_A
Probab=99.04 E-value=2.3e-10 Score=99.88 Aligned_cols=74 Identities=22% Similarity=0.122 Sum_probs=62.1
Q ss_pred CHHHHHHHHHHcCCeEEecCCcCCCC---hHHHHHHHHHcCCcEEEEecCcc-----------cHHHHHHHHHHcCCcee
Q 025874 67 LAEVAVQLIHRTGGLAVLAHPWALKN---PAAIIRKLKDVGLHGLEVYRSDG-----------KLVAYTDLADTYGLLKL 132 (247)
Q Consensus 67 ~~~EaI~~Ih~aGGvaVLAHP~~~~~---~~~li~~l~~~GlDGIEv~~~~~-----------~~~~~~~lA~~~gLl~T 132 (247)
.+.+++..++++|+++|+|||.++.. ..+++..+++.|+. +|+.+++. ....+.+++.++|++.|
T Consensus 121 ~~~~~i~~i~~~g~~~vlaHp~r~~~~~~~~~~l~~l~~~G~~-lEiN~~s~~~~~~~g~~~~~~~~~~~~~~~~gl~~~ 199 (247)
T 2wje_A 121 DIHSALSKILMLGITPVIAHIERYDALENNEKRVRELIDMGCY-TQVNSSHVLKPKLFGERYKFMKKRAQYFLEQDLVHV 199 (247)
T ss_dssp HHHHHHHHHHTTTCEEEETTGGGCGGGTTCHHHHHHHHHTTCE-EEEEHHHHSCCCSSCCSCHHHHHHHHHHHHTTCCSE
T ss_pred HHHHHHHHHHHCCCcEEEEehhhHHHHhhCHHHHHHHHHCCCE-EEEecHhhHhcCCCCCcChHHHHHHHHHHHCCCeEE
Confidence 35779999999999999999998752 35788999999997 99987543 23678888899999999
Q ss_pred ecCCCCCCC
Q 025874 133 GGSDYHGRG 141 (247)
Q Consensus 133 GGSDfHG~~ 141 (247)
.|||+|++.
T Consensus 200 ~GSDaH~~~ 208 (247)
T 2wje_A 200 IASDMHNLD 208 (247)
T ss_dssp EECCBCCSS
T ss_pred EEeCCCCCc
Confidence 999999984
No 6
>2yxo_A Histidinol phosphatase; metal-dependent, hydrolase; 1.60A {Thermus thermophilus} PDB: 2yz5_A 2z4g_A
Probab=98.93 E-value=1.9e-09 Score=93.67 Aligned_cols=72 Identities=19% Similarity=0.139 Sum_probs=58.2
Q ss_pred HHHHHHHHHHcCCeEEecCCcCCC---C----------hHHHHHHHHHcCCcEEEEecCcc--------cHHHHHHHHHH
Q 025874 68 AEVAVQLIHRTGGLAVLAHPWALK---N----------PAAIIRKLKDVGLHGLEVYRSDG--------KLVAYTDLADT 126 (247)
Q Consensus 68 ~~EaI~~Ih~aGGvaVLAHP~~~~---~----------~~~li~~l~~~GlDGIEv~~~~~--------~~~~~~~lA~~ 126 (247)
.++++++|+. ||++|+|||.++. . ...+++.+++.| .+||+.+++. ....+.++|++
T Consensus 137 ~~~~~~~i~~-g~~~vlaHp~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g-~~iEvn~~~~~~~~~~~~~~~~~~~~~~~ 214 (267)
T 2yxo_A 137 FQEVEKAARS-GLFHAIGHLDLPKKFGHRLPEEALLELAEPALRAVAEAG-LFLDVNTAGLRRPAKEVYPAPALLRRARE 214 (267)
T ss_dssp HHHHHHHHTS-SCCSEESCTTGGGTTSCCCCHHHHHHHHHHHHHHHHHHT-CEEEEEGGGGGSTTCSCBSCHHHHHHHHH
T ss_pred HHHHHHHHhc-CCCCEEeCccHHHHhCCCCChHHHHHHHHHHHHHHHHcC-CEEEEEchHhcCCCCCCCCCHHHHHHHHH
Confidence 3678899986 9999999998742 1 235677888888 6999987642 35889999999
Q ss_pred cCCceeecCCCCCCC
Q 025874 127 YGLLKLGGSDYHGRG 141 (247)
Q Consensus 127 ~gLl~TGGSDfHG~~ 141 (247)
+|+.+|+|||+|++.
T Consensus 215 ~g~~~~~gSDaH~~~ 229 (267)
T 2yxo_A 215 LGIGLVLGSDAHRPE 229 (267)
T ss_dssp HTCCEEEECCBSSGG
T ss_pred cCCCEEEecCCCCHH
Confidence 999999999999974
No 7
>3qy7_A Tyrosine-protein phosphatase YWQE; TIM barrel, polymerase and histindinol phosphatase(PHP)-like phosphatase, hydrolase; 1.62A {Bacillus subtilis} PDB: 3qy6_A
Probab=98.92 E-value=1.3e-09 Score=97.09 Aligned_cols=75 Identities=20% Similarity=0.218 Sum_probs=63.1
Q ss_pred CCHHHHHHHHHHcCCeEEecCCcCCCC---hHHHHHHHHHcCCcEEEEecCcc------cHHHHHHHHHHcCCceeecCC
Q 025874 66 PLAEVAVQLIHRTGGLAVLAHPWALKN---PAAIIRKLKDVGLHGLEVYRSDG------KLVAYTDLADTYGLLKLGGSD 136 (247)
Q Consensus 66 ~~~~EaI~~Ih~aGGvaVLAHP~~~~~---~~~li~~l~~~GlDGIEv~~~~~------~~~~~~~lA~~~gLl~TGGSD 136 (247)
..+.++|..|..+|+++|||||.+|.. ..+.+.++++.|. ++|+..++. ....+.+.|.++|++.|.|||
T Consensus 116 ~~~~~~l~~i~~~g~v~ILAHPeRy~~~~~~~~~l~~l~~~G~-~iEiN~~s~~g~~g~~~~~~~~~~~~~gl~~~igSD 194 (262)
T 3qy7_A 116 RYAEQLFYDLQLKGYIPVIAHPERNREIRENPSLLYHLVEKGA-ASQITSGSLAGIFGKQLKAFSLRLVEANLIHFVASD 194 (262)
T ss_dssp TTHHHHHHHHHHTTCEEEEECGGGCHHHHHCTHHHHHHHHTTC-EEEEEHHHHHTTTCHHHHHHHHHHHHTTCCCEEECC
T ss_pred HHHHHHHHHHHHCCCcEEEECCCccccccccHHHHHHHHHCCC-EEEEECCccCcccchHHHHHHHHHHhCCCeEEEEcc
Confidence 468899999999999999999998752 1257889999995 899987542 356788888999999999999
Q ss_pred CCCCC
Q 025874 137 YHGRG 141 (247)
Q Consensus 137 fHG~~ 141 (247)
+|++.
T Consensus 195 aH~~~ 199 (262)
T 3qy7_A 195 AHNVK 199 (262)
T ss_dssp BCSSS
T ss_pred CCCCC
Confidence 99985
No 8
>2anu_A Hypothetical protein TM0559; predicted metal-dependent phosphoesterase (PHP famil structural genomics, joint center for structural genomics; 2.40A {Thermotoga maritima} SCOP: c.6.3.1
Probab=98.61 E-value=2.9e-08 Score=86.88 Aligned_cols=72 Identities=17% Similarity=0.198 Sum_probs=53.8
Q ss_pred CCCHHHHHHHHHHcCCeEEecCCcCCCChHH-----H---HHHHHHcCCcEEEEecCcccHHHHHHHHHHcCCceeecCC
Q 025874 65 EPLAEVAVQLIHRTGGLAVLAHPWALKNPAA-----I---IRKLKDVGLHGLEVYRSDGKLVAYTDLADTYGLLKLGGSD 136 (247)
Q Consensus 65 ~~~~~EaI~~Ih~aGGvaVLAHP~~~~~~~~-----l---i~~l~~~GlDGIEv~~~~~~~~~~~~lA~~~gLl~TGGSD 136 (247)
...++++++.+++.|+++|+|||.++..... . .+.+ ...+++||++++..- .++|+++|+.+|+|||
T Consensus 131 ~~~~~~~l~~i~~~g~~~ilaHp~~~~~~~~~~~~~~~~~~~~~-~~~~~aiEin~~~~~----~~~~~~~g~~~~~gSD 205 (255)
T 2anu_A 131 SLPVEEIVEKLKEQNALVIAAHPDRKKQDEEHLSWYLWANMERF-KDTFDAWEIANRDDL----FNSVGVKKYRYVANSD 205 (255)
T ss_dssp TSCHHHHHHHHHHTTCEEEECCCCTTC-----CCCHHHHSTTTT-TTTCSEEEEEETTEE----CHHHHHTTCCEEEECC
T ss_pred CCCHHHHHHHHHHCCCeEEEeCCCccccccccccccccchhhhh-hccCcEEEEcCCCch----hhHHHHcCCceEeccC
Confidence 3589999999999999999999997653211 0 1122 236899999997632 1368899999999999
Q ss_pred CCCCC
Q 025874 137 YHGRG 141 (247)
Q Consensus 137 fHG~~ 141 (247)
+|.+.
T Consensus 206 AH~~~ 210 (255)
T 2anu_A 206 FHELW 210 (255)
T ss_dssp BCSGG
T ss_pred CCCCc
Confidence 99974
No 9
>2w9m_A Polymerase X; SAXS, DNA repair, DNA polymerase, DNA replication; 2.46A {Deinococcus radiodurans}
Probab=97.96 E-value=8.5e-06 Score=79.80 Aligned_cols=70 Identities=16% Similarity=0.036 Sum_probs=54.5
Q ss_pred HHHHHHHHHcCCeEEecCCcCC---------CChHHHHHHHHHcCCcEEEEecCcc---cHHHHHHHHHHcCCceeecCC
Q 025874 69 EVAVQLIHRTGGLAVLAHPWAL---------KNPAAIIRKLKDVGLHGLEVYRSDG---KLVAYTDLADTYGLLKLGGSD 136 (247)
Q Consensus 69 ~EaI~~Ih~aGGvaVLAHP~~~---------~~~~~li~~l~~~GlDGIEv~~~~~---~~~~~~~lA~~~gLl~TGGSD 136 (247)
++.+++++ .|++.|+|||... .+.+.+++.+++.| .+||+.+++. .+..+.++|++ |+.+|.|||
T Consensus 440 ~~~~~ai~-~g~v~IlaHP~~~~~~~~~~~~~~~~~il~~~~e~g-~~lEIN~~~~r~~~~~~~~~~a~e-Gl~i~igSD 516 (578)
T 2w9m_A 440 ERLIRAVS-HPLVTVLGHATGRLLLRRPGYALDLDAVLGACEANG-TVVEINANAARLDLDWREALRWRE-RLKFAINTD 516 (578)
T ss_dssp HHHHHHHT-CSSCCEECSTTCCBTTTBCCCCCCHHHHHHHHHHHT-CEEEEECSTTTCBSCHHHHHHHTT-TCCEEEECC
T ss_pred HHHHHHHh-cCCCeEEECcchhhcCCCcCchhhHHHHHHHHHHCC-CEEEEECCCCCcCcHHHHHHHHHc-CCEEEEECC
Confidence 34555554 5999999999742 13456788888887 4999988753 46788999999 999999999
Q ss_pred CCCCC
Q 025874 137 YHGRG 141 (247)
Q Consensus 137 fHG~~ 141 (247)
+|.+.
T Consensus 517 AH~~~ 521 (578)
T 2w9m_A 517 AHVPG 521 (578)
T ss_dssp CSSGG
T ss_pred CCChh
Confidence 99974
No 10
>3b0x_A DNA polymerase beta family (X family); structural genomics, riken structural genomics/proteomics in RSGI, polxc, PHP, DRP lyase; HET: DNA DGT; 1.36A {Thermus thermophilus} PDB: 3au2_A* 3au6_A* 3auo_A* 3b0y_A*
Probab=97.19 E-value=0.00055 Score=66.80 Aligned_cols=71 Identities=24% Similarity=0.212 Sum_probs=52.4
Q ss_pred HHHHHHHHHcCCeEEecCCcC-C-----C---ChHHHHHHHHHcCCcEEEEecCcc---cHHHHHHHHHHcCCceeecCC
Q 025874 69 EVAVQLIHRTGGLAVLAHPWA-L-----K---NPAAIIRKLKDVGLHGLEVYRSDG---KLVAYTDLADTYGLLKLGGSD 136 (247)
Q Consensus 69 ~EaI~~Ih~aGGvaVLAHP~~-~-----~---~~~~li~~l~~~GlDGIEv~~~~~---~~~~~~~lA~~~gLl~TGGSD 136 (247)
++.+++++ .|++.|+|||.. + . ..+.+++.+++.| .+||+-.++. ....+.++|.++|+..+.|||
T Consensus 452 ~~l~~~i~-~g~v~IlaHp~~r~~~~r~~~~~~~~~il~~~~~~g-~~lEIN~~~~~~~~~~~~~~~a~e~G~~~vigSD 529 (575)
T 3b0x_A 452 KRLLKALE-NPFVHVLAHPTARLLGRRAPIEADWEAVFQKAKEKG-VAVEIDGYYDRMDLPDDLARMAYGMGLWISLSTD 529 (575)
T ss_dssp HHHHHHTT-CTTCCEECSTTCCBTTTBCCCCCCHHHHHHHHHHHT-CEEEEECCTTTCBSCHHHHHHHHHTTCCEEEECC
T ss_pred HHHHHHHh-cCCCeEEECCchhhcCCCcCchHHHHHHHHHHHHcC-CEEEEeCCCCcCCchHHHHHHHHHcCCeEEEECC
Confidence 34455554 799999999972 1 1 2345777777766 6999965432 346788999999999999999
Q ss_pred CCCCC
Q 025874 137 YHGRG 141 (247)
Q Consensus 137 fHG~~ 141 (247)
.|.+.
T Consensus 530 AH~~~ 534 (575)
T 3b0x_A 530 AHQTD 534 (575)
T ss_dssp BSSGG
T ss_pred CCChH
Confidence 99974
No 11
>3dcp_A Histidinol-phosphatase; HISK, histidine biosynthesis, NESG, LMR141, structural genomics, PSI-2, protein structure initiative; 2.10A {Listeria monocytogenes str}
Probab=95.50 E-value=0.042 Score=48.87 Aligned_cols=76 Identities=20% Similarity=0.145 Sum_probs=51.7
Q ss_pred HHHHHHHHc-C--CeEEecCCcCC---C----------C------hHHHHHHHHHcCCcEEEEecCcc---------cHH
Q 025874 70 VAVQLIHRT-G--GLAVLAHPWAL---K----------N------PAAIIRKLKDVGLHGLEVYRSDG---------KLV 118 (247)
Q Consensus 70 EaI~~Ih~a-G--GvaVLAHP~~~---~----------~------~~~li~~l~~~GlDGIEv~~~~~---------~~~ 118 (247)
..+++|... | -+-|++||... . . .+++++.+++.|+ +||+-.++. ...
T Consensus 162 ~~~~~i~~~l~~~~~dilgH~Dlir~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~g~-~lEiN~~~l~~~~~~~~yp~~ 240 (283)
T 3dcp_A 162 GVKQSIEADLGLFKPRRMGHISLCQKFQQFFGEDTSDFSEEVMEKFRVILALVKKRDY-ELDFNTAGLFKPLCGETYPPK 240 (283)
T ss_dssp HHHHHHHCCCCTTCCSEECCTTGGGTTGGGGTCCGGGCCHHHHHHHHHHHHHHHHHTC-EEEEECGGGGSTTCCSCBSCH
T ss_pred HHHHHHHhCccccCCCEEECCcHHHHcCcccccccccccHHHHHHHHHHHHHHHHcCC-EEEEechHhcCCCCCCcCCHH
Confidence 445555542 1 33699999731 1 1 2355666666664 899987531 247
Q ss_pred HHHHHHHHcCCceeecCCCCCCCCCCCccccCc
Q 025874 119 AYTDLADTYGLLKLGGSDYHGRGGHGESELGSV 151 (247)
Q Consensus 119 ~~~~lA~~~gLl~TGGSDfHG~~~~~~~~lG~~ 151 (247)
.+.++|+++|..++-|||.|.+. .+|..
T Consensus 241 ~~~~~~~~~g~~i~igSDAH~~~-----~vg~~ 268 (283)
T 3dcp_A 241 KIVTLASELQIPFVYGSDSHGVQ-----DIGRG 268 (283)
T ss_dssp HHHHHHHHTTCCEEEECCBSSGG-----GTTTT
T ss_pred HHHHHHHHcCCCEEEEcCCCCHH-----HHhCh
Confidence 88999999999999999999974 57753
No 12
>1v77_A PH1877P, hypothetical protein PH1877; RNAse P protein, TIM-barrel, RNA binding protein; 1.80A {Pyrococcus horikoshii} SCOP: c.6.3.2 PDB: 2czv_A*
Probab=93.65 E-value=0.15 Score=43.27 Aligned_cols=72 Identities=13% Similarity=0.177 Sum_probs=51.7
Q ss_pred CHHHHHHHHHHcCCeEEecCCcCCC---C-hHHHHHHHHHcCCcEEEEecCcc---c----------HHHHHHHHHHcCC
Q 025874 67 LAEVAVQLIHRTGGLAVLAHPWALK---N-PAAIIRKLKDVGLHGLEVYRSDG---K----------LVAYTDLADTYGL 129 (247)
Q Consensus 67 ~~~EaI~~Ih~aGGvaVLAHP~~~~---~-~~~li~~l~~~GlDGIEv~~~~~---~----------~~~~~~lA~~~gL 129 (247)
+.+.--.++ +. .|=|++||+..+ . ...+++..++.|+ .+|+-+++. . ...+.++|++||.
T Consensus 85 ~~~~n~~a~-~~-~vDII~Hp~~~~~~~~~~~~~a~~A~e~gv-~lEIn~s~~~~~~~~~R~~~~~~~~~il~l~k~~g~ 161 (212)
T 1v77_A 85 DLRVIRYSI-EK-GVDAIISPWVNRKDPGIDHVLAKLMVKKNV-ALGFSLRPLLYSNPYERANLLRFMMKAWKLVEKYKV 161 (212)
T ss_dssp CHHHHHHHH-HT-TCSEEECTTTTSSSCSCCHHHHHHHHHHTC-EEEEESHHHHHSCHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHH-hC-CCCEEecccccccCCCCCHHHHHHHHHCCe-EEEEECcHHhcCCcchHHHHHHHHHHHHHHHHhcCC
Confidence 444444444 45 799999998542 1 2466776777775 899988652 1 1367899999999
Q ss_pred ceeecCCCCCCC
Q 025874 130 LKLGGSDYHGRG 141 (247)
Q Consensus 130 l~TGGSDfHG~~ 141 (247)
.++-|||.|.+.
T Consensus 162 ~ivisSDAh~~~ 173 (212)
T 1v77_A 162 RRFLTSSAQEKW 173 (212)
T ss_dssp CEEEECCCSSGG
T ss_pred CEEEeCCCCChh
Confidence 999999999974
No 13
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=84.05 E-value=2.1 Score=36.21 Aligned_cols=42 Identities=12% Similarity=-0.018 Sum_probs=35.7
Q ss_pred ChHHHHHHHHHcCCcEEEEecCc-ccHHHHHHHHHHcCCceee
Q 025874 92 NPAAIIRKLKDVGLHGLEVYRSD-GKLVAYTDLADTYGLLKLG 133 (247)
Q Consensus 92 ~~~~li~~l~~~GlDGIEv~~~~-~~~~~~~~lA~~~gLl~TG 133 (247)
..++.++.+.+.|+||||+..+. .+.+.+.++++++||-+++
T Consensus 24 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~l~~~gl~~~~ 66 (269)
T 3ngf_A 24 PFLERFRLAAEAGFGGVEFLFPYDFDADVIARELKQHNLTQVL 66 (269)
T ss_dssp CHHHHHHHHHHTTCSEEECSCCTTSCHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHHHcCCCEEEecCCccCCHHHHHHHHHHcCCcEEE
Confidence 35688999999999999998765 3678999999999998775
No 14
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=75.16 E-value=6.9 Score=31.94 Aligned_cols=63 Identities=17% Similarity=0.096 Sum_probs=46.0
Q ss_pred HHHHHHHHc-CCeEEecCCcCCCChHHHHHHHHHcCCcEEEEecCcc--cHHHHHHHHHHcCCcee
Q 025874 70 VAVQLIHRT-GGLAVLAHPWALKNPAAIIRKLKDVGLHGLEVYRSDG--KLVAYTDLADTYGLLKL 132 (247)
Q Consensus 70 EaI~~Ih~a-GGvaVLAHP~~~~~~~~li~~l~~~GlDGIEv~~~~~--~~~~~~~lA~~~gLl~T 132 (247)
+.|+.+++. .+++|.+|+......+..++.++++|.|+|=+..... +...+.+.++++|+.+.
T Consensus 42 ~~i~~ir~~~~~~~i~~~~~~~~~~~~~~~~~~~~Gad~v~v~~~~~~~~~~~~~~~~~~~g~~~~ 107 (211)
T 3f4w_A 42 NAIKAIKEKYPHKEVLADAKIMDGGHFESQLLFDAGADYVTVLGVTDVLTIQSCIRAAKEAGKQVV 107 (211)
T ss_dssp HHHHHHHHHCTTSEEEEEEEECSCHHHHHHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHhCCCCEEEEEEEeccchHHHHHHHHhcCCCEEEEeCCCChhHHHHHHHHHHHcCCeEE
Confidence 578888877 4788999986544444458888899999998865432 34778888999987543
No 15
>4gbu_A NADPH dehydrogenase 1; alpha/beta barrel, enenone reductase, alkene reductase, NADP oxidoreductase, carvone, enenatioselectivity; HET: 0WV 1PE FMN; 1.18A {Saccharomyces pastorianus} PDB: 4ge8_A* 1oya_A* 1oyb_A* 1oyc_A* 3tx9_A* 3rnd_A* 1k02_A* 1k03_A* 1bwk_A* 1bwl_A*
Probab=74.93 E-value=4.2 Score=37.57 Aligned_cols=23 Identities=17% Similarity=-0.078 Sum_probs=18.4
Q ss_pred CHHHHHHHHHHcCCeEE--ecCCcC
Q 025874 67 LAEVAVQLIHRTGGLAV--LAHPWA 89 (247)
Q Consensus 67 ~~~EaI~~Ih~aGGvaV--LAHP~~ 89 (247)
....+++.||+.|+.++ |.|+++
T Consensus 97 ~~k~l~davH~~G~~i~~QL~H~Gr 121 (400)
T 4gbu_A 97 EWTKIFNAIHEKKSFVWVQLAVLGW 121 (400)
T ss_dssp HHHHHHHHHHHTTCEEEEEEECCGG
T ss_pred HHHHHHHHHHhcCCceEEeeeecCc
Confidence 45678999999999876 478764
No 16
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=74.84 E-value=5.8 Score=33.58 Aligned_cols=42 Identities=10% Similarity=0.144 Sum_probs=33.4
Q ss_pred ChHHHHHHHHHcCCcEEEEecCc--ccHHHHHHHHHHcCCceee
Q 025874 92 NPAAIIRKLKDVGLHGLEVYRSD--GKLVAYTDLADTYGLLKLG 133 (247)
Q Consensus 92 ~~~~li~~l~~~GlDGIEv~~~~--~~~~~~~~lA~~~gLl~TG 133 (247)
..++.++.+.+.|+||||++... .+...+.++++++||-+++
T Consensus 39 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~gl~v~~ 82 (287)
T 3kws_A 39 SLNEKLDFMEKLGVVGFEPGGGGLAGRVNEIKQALNGRNIKVSA 82 (287)
T ss_dssp SHHHHHHHHHHTTCCEEECBSTTCGGGHHHHHHHHTTSSCEECE
T ss_pred CHHHHHHHHHHcCCCEEEecCCchHHHHHHHHHHHHHcCCeEEE
Confidence 35678888888999999998763 3577888899999998764
No 17
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=74.17 E-value=3.9 Score=33.87 Aligned_cols=41 Identities=7% Similarity=-0.056 Sum_probs=34.0
Q ss_pred hHHHHHHHHHcCCcEEEEecCc-ccHHHHHHHHHHcCCceee
Q 025874 93 PAAIIRKLKDVGLHGLEVYRSD-GKLVAYTDLADTYGLLKLG 133 (247)
Q Consensus 93 ~~~li~~l~~~GlDGIEv~~~~-~~~~~~~~lA~~~gLl~TG 133 (247)
.++.++.+.+.|++|||+..+. .+...+.+.++++||-+++
T Consensus 17 ~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~l~~~gl~~~~ 58 (260)
T 1k77_A 17 FIERFAAARKAGFDAVEFLFPYNYSTLQIQKQLEQNHLTLAL 58 (260)
T ss_dssp GGGHHHHHHHHTCSEEECSCCTTSCHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHhCCCEEEecCCCCCCHHHHHHHHHHcCCceEE
Confidence 4567888889999999998764 3678889999999998875
No 18
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=73.68 E-value=6.9 Score=32.59 Aligned_cols=42 Identities=21% Similarity=0.357 Sum_probs=26.7
Q ss_pred hHHHHHHHHHcCCcEEEEecCc--------------c---cHHHHHHHHHHcCCceeec
Q 025874 93 PAAIIRKLKDVGLHGLEVYRSD--------------G---KLVAYTDLADTYGLLKLGG 134 (247)
Q Consensus 93 ~~~li~~l~~~GlDGIEv~~~~--------------~---~~~~~~~lA~~~gLl~TGG 134 (247)
..+.++.+.+.|++|||++... . +.+.+.+.++++||-+++.
T Consensus 24 ~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~ 82 (262)
T 3p6l_A 24 LTEALDKTQELGLKYIEIYPGHKLGGKWGDKVFDFNLDAQTQKEIKELAASKGIKIVGT 82 (262)
T ss_dssp HHHHHHHHHHTTCCEEEECTTEECCGGGTTCEESTTCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHcCCCEEeecCCcccccccccccccccCCHHHHHHHHHHHHHcCCeEEEE
Confidence 4566777777777777776321 1 2456677777777766543
No 19
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=73.51 E-value=6.4 Score=32.84 Aligned_cols=41 Identities=12% Similarity=0.186 Sum_probs=26.5
Q ss_pred hHHHHHHHHHcCCcEEEEecCc-------ccHHHHHHHHHHcCCceee
Q 025874 93 PAAIIRKLKDVGLHGLEVYRSD-------GKLVAYTDLADTYGLLKLG 133 (247)
Q Consensus 93 ~~~li~~l~~~GlDGIEv~~~~-------~~~~~~~~lA~~~gLl~TG 133 (247)
.++.++.+.+.|+||||++... .+.+.+.+.++++||-+++
T Consensus 32 ~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~ 79 (257)
T 3lmz_A 32 LDTTLKTLERLDIHYLCIKDFHLPLNSTDEQIRAFHDKCAAHKVTGYA 79 (257)
T ss_dssp HHHHHHHHHHTTCCEEEECTTTSCTTCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHhCCCEEEEecccCCCCCCHHHHHHHHHHHHHcCCeEEE
Confidence 4566777777777777776431 1235667777777776654
No 20
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=72.37 E-value=4.2 Score=34.26 Aligned_cols=42 Identities=12% Similarity=0.049 Sum_probs=23.7
Q ss_pred hHHHHHHHHHcCCcEEEEecCc---------ccHHHHHHHHHHcCCceeec
Q 025874 93 PAAIIRKLKDVGLHGLEVYRSD---------GKLVAYTDLADTYGLLKLGG 134 (247)
Q Consensus 93 ~~~li~~l~~~GlDGIEv~~~~---------~~~~~~~~lA~~~gLl~TGG 134 (247)
.++.++.+++.|+||||++.+. .....+.+.++++||-+++-
T Consensus 17 ~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~ 67 (286)
T 3dx5_A 17 FTDIVQFAYENGFEGIELWGTHAQNLYMQEYETTERELNCLKDKTLEITMI 67 (286)
T ss_dssp HHHHHHHHHHTTCCEEEEEHHHHHHHHHHCHHHHHHHHHHTGGGTCCEEEE
T ss_pred HHHHHHHHHHhCCCEEEEcccccccccccCHHHHHHHHHHHHHcCCeEEEE
Confidence 3456666666677777765321 12345556666666666543
No 21
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=71.11 E-value=13 Score=30.74 Aligned_cols=14 Identities=21% Similarity=0.195 Sum_probs=7.5
Q ss_pred CCHHHHHHHHHHcC
Q 025874 66 PLAEVAVQLIHRTG 79 (247)
Q Consensus 66 ~~~~EaI~~Ih~aG 79 (247)
.+++++++.++++|
T Consensus 19 ~~~~~~l~~~~~~G 32 (272)
T 2q02_A 19 LSIEAFFRLVKRLE 32 (272)
T ss_dssp SCHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHcC
Confidence 34555555555554
No 22
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=70.04 E-value=5.4 Score=33.73 Aligned_cols=41 Identities=20% Similarity=0.135 Sum_probs=33.8
Q ss_pred hHHHHHHHHHcCCcEEEEecCc------ccHHHHHHHHHHcCCceee
Q 025874 93 PAAIIRKLKDVGLHGLEVYRSD------GKLVAYTDLADTYGLLKLG 133 (247)
Q Consensus 93 ~~~li~~l~~~GlDGIEv~~~~------~~~~~~~~lA~~~gLl~TG 133 (247)
.++.++.+.+.|+||||+.... .+...+.++++++||-+++
T Consensus 19 ~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~i~~ 65 (294)
T 3vni_A 19 YKYYIEKVAKLGFDILEIAASPLPFYSDIQINELKACAHGNGITLTV 65 (294)
T ss_dssp HHHHHHHHHHHTCSEEEEESTTGGGCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHcCCCEEEecCcccCCcCHHHHHHHHHHHHHcCCeEEE
Confidence 5678888999999999998432 2457888999999999887
No 23
>2d73_A Alpha-glucosidase SUSB; glycoside hydrolase family 97, TIM barrel; 1.60A {Bacteroides thetaiotaomicron vpi-5482} PDB: 2zq0_A* 2jke_A* 2jka_A* 2jkp_A*
Probab=69.58 E-value=16 Score=36.83 Aligned_cols=77 Identities=12% Similarity=0.116 Sum_probs=53.3
Q ss_pred CCCCCCHHHHHHHHHHcCCeEEecC-CcCC-----C-ChHHHHHHHHHcCCcEEEEecC-----cc-----c--H---HH
Q 025874 62 TGSEPLAEVAVQLIHRTGGLAVLAH-PWAL-----K-NPAAIIRKLKDVGLHGLEVYRS-----DG-----K--L---VA 119 (247)
Q Consensus 62 ~~~~~~~~EaI~~Ih~aGGvaVLAH-P~~~-----~-~~~~li~~l~~~GlDGIEv~~~-----~~-----~--~---~~ 119 (247)
|.+..+++|+++-.++-| |=++-| -..- . ..++.++.+.+.|+.||=+=+= +. + + ..
T Consensus 414 p~pd~Dl~eL~~YA~sKG-V~iilw~~t~~~~~n~e~~~d~~f~~~~~~Gv~GVKvdF~g~~~~r~~~h~~Q~~v~~Y~~ 492 (738)
T 2d73_A 414 PYPDFDVKEIHRYAARKG-IKMMMHHETSASVRNYERHMDKAYQFMADNGYNSVKSGYVGNIIPRGEHHYGQWMNNHYLY 492 (738)
T ss_dssp BCTTCCHHHHHHHHHHTT-CEEEEEEECTTBHHHHHHHHHHHHHHHHHTTCCEEEEECCSSCBSTTCCTTSHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHhCC-CEEEEEEcCCCchhhHHHHHHHHHHHHHHcCCCEEEeCccccCcCCcccccchHHHHHHHH
Confidence 345678999999999876 544444 3321 1 1346778888999999988543 21 1 2 45
Q ss_pred HHHHHHHcCCceeecCCCCCCCCC
Q 025874 120 YTDLADTYGLLKLGGSDYHGRGGH 143 (247)
Q Consensus 120 ~~~lA~~~gLl~TGGSDfHG~~~~ 143 (247)
+.+-|.+|+|++ ||||..++
T Consensus 493 i~~~AA~~~LmV----nfHg~~kP 512 (738)
T 2d73_A 493 AVKKAADYKIMV----NAHEATRP 512 (738)
T ss_dssp HHHHHHHTTCEE----EETTSCCC
T ss_pred HHHHHHHcCcEE----EccCCcCC
Confidence 567788999999 99998543
No 24
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=69.12 E-value=6.8 Score=32.89 Aligned_cols=42 Identities=19% Similarity=0.279 Sum_probs=34.0
Q ss_pred hHHHHHHHHHcCCcEEEEecCc------ccHHHHHHHHHHcCCceeec
Q 025874 93 PAAIIRKLKDVGLHGLEVYRSD------GKLVAYTDLADTYGLLKLGG 134 (247)
Q Consensus 93 ~~~li~~l~~~GlDGIEv~~~~------~~~~~~~~lA~~~gLl~TGG 134 (247)
..+.++.+.+.|+||||+.... .+...+.++++++||-+++.
T Consensus 19 ~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~ 66 (290)
T 2qul_A 19 FPATAKRIAGLGFDLMEISLGEFHNLSDAKKRELKAVADDLGLTVMCC 66 (290)
T ss_dssp HHHHHHHHHHTTCSEEEEESTTGGGSCHHHHHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHHHHhCCCEEEEecCCccccchhhHHHHHHHHHHcCCceEEe
Confidence 5678888889999999998653 23567889999999988874
No 25
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=68.79 E-value=17 Score=31.33 Aligned_cols=59 Identities=17% Similarity=0.113 Sum_probs=43.9
Q ss_pred HHHHHHHHHHcCCeEEecCCcCCCChHHHHHHHHHcCCcEEEEecC-cccHHHHHHHHHHc
Q 025874 68 AEVAVQLIHRTGGLAVLAHPWALKNPAAIIRKLKDVGLHGLEVYRS-DGKLVAYTDLADTY 127 (247)
Q Consensus 68 ~~EaI~~Ih~aGGvaVLAHP~~~~~~~~li~~l~~~GlDGIEv~~~-~~~~~~~~~lA~~~ 127 (247)
+.+..+.+.+.+=++|+...-. ....++.+.+.+.|++.||+-.. ....+...++++++
T Consensus 24 m~~~~~~l~~~~vv~Vir~~~~-~~a~~~a~al~~gGi~~iEvt~~t~~a~e~I~~l~~~~ 83 (232)
T 4e38_A 24 MSTINNQLKALKVIPVIAIDNA-EDIIPLGKVLAENGLPAAEITFRSDAAVEAIRLLRQAQ 83 (232)
T ss_dssp HHHHHHHHHHHCEEEEECCSSG-GGHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHC
T ss_pred HHHHHHHHHhCCEEEEEEcCCH-HHHHHHHHHHHHCCCCEEEEeCCCCCHHHHHHHHHHhC
Confidence 4578899999999999987532 23457788899999999999654 34455666677776
No 26
>3a24_A Alpha-galactosidase; glycoside hydrolase family 97, retaining glycosidase; HET: MES; 2.30A {Bacteroides thetaiotaomicron}
Probab=68.39 E-value=16 Score=36.22 Aligned_cols=78 Identities=17% Similarity=0.217 Sum_probs=53.4
Q ss_pred CCCCCCHHHHHHHHHHcCCeEEecCCc-CC-CChHHHHHHHHHcCCcEEEEecC-cc-c--H---HHHHHHHHHcCCcee
Q 025874 62 TGSEPLAEVAVQLIHRTGGLAVLAHPW-AL-KNPAAIIRKLKDVGLHGLEVYRS-DG-K--L---VAYTDLADTYGLLKL 132 (247)
Q Consensus 62 ~~~~~~~~EaI~~Ih~aGGvaVLAHP~-~~-~~~~~li~~l~~~GlDGIEv~~~-~~-~--~---~~~~~lA~~~gLl~T 132 (247)
|.+..+++|+++-.|+-|=-.++=|-. .+ ...++.++.+.+.|++||=+-+- +. + . ....+-|.+|+|++
T Consensus 343 ~~p~~di~~l~~Ya~~kgV~i~lw~~~~~~~~~~~~~~~~~~~~Gv~gvK~Df~~~~~Q~~v~~y~~i~~~aA~~~l~V- 421 (641)
T 3a24_A 343 VVKEIDLKELVDYAASKNVGIILWAGYHAFERDMENVCRHYAEMGVKGFKVDFMDRDDQEMTAFNYRAAEMCAKYKLIL- 421 (641)
T ss_dssp BCTTCCHHHHHHHHHHTTCEEEEEEEHHHHHTSHHHHHHHHHHHTCCEEEEECCCCCSHHHHHHHHHHHHHHHHTTCEE-
T ss_pred cCCcCCHHHHHHHHHhcCCEEEEEeeCcchHHHHHHHHHHHHHcCCCEEEECCCCCCcHHHHHHHHHHHHHHHHcCCEE-
Confidence 334578999999999977333333322 22 23466888899999999988653 22 1 2 34567778999997
Q ss_pred ecCCCCCCCCC
Q 025874 133 GGSDYHGRGGH 143 (247)
Q Consensus 133 GGSDfHG~~~~ 143 (247)
||||..++
T Consensus 422 ---~fHg~~~P 429 (641)
T 3a24_A 422 ---DLHGTHKP 429 (641)
T ss_dssp ---EECSCCCC
T ss_pred ---EcCCCcCC
Confidence 99998543
No 27
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=67.40 E-value=8 Score=33.50 Aligned_cols=42 Identities=29% Similarity=0.427 Sum_probs=34.3
Q ss_pred hHHHHHHHHHcCCcEEEEec-----C-cccHHHHHHHHHHcCCceeec
Q 025874 93 PAAIIRKLKDVGLHGLEVYR-----S-DGKLVAYTDLADTYGLLKLGG 134 (247)
Q Consensus 93 ~~~li~~l~~~GlDGIEv~~-----~-~~~~~~~~~lA~~~gLl~TGG 134 (247)
..+.++.+.++|++|||++. . ..+.+.+.+.++++||-+++.
T Consensus 31 ~~~~l~~~a~~G~~~VEl~~~~~~~~~~~~~~~~~~~l~~~GL~v~~~ 78 (303)
T 3l23_A 31 VAANLRKVKDMGYSKLELAGYGKGAIGGVPMMDFKKMAEDAGLKIISS 78 (303)
T ss_dssp HHHHHHHHHHTTCCEEEECCEETTEETTEEHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHcCCCEEEeccccCcccCCCCHHHHHHHHHHcCCeEEEE
Confidence 46788899999999999975 1 236788999999999988653
No 28
>2zvr_A Uncharacterized protein TM_0416; hyperthermophIle, ketohexose 3-epimeras tagatose 3-epimerase, isomerase; 2.20A {Thermotoga maritima}
Probab=65.78 E-value=9.7 Score=32.27 Aligned_cols=40 Identities=18% Similarity=0.093 Sum_probs=32.8
Q ss_pred hHHHHHHHHHcCCcEEEEecCc---ccHHHHHHHHHHcCCcee
Q 025874 93 PAAIIRKLKDVGLHGLEVYRSD---GKLVAYTDLADTYGLLKL 132 (247)
Q Consensus 93 ~~~li~~l~~~GlDGIEv~~~~---~~~~~~~~lA~~~gLl~T 132 (247)
.++.++.+.+.|+||||+.... .+...+.++++++||-++
T Consensus 43 ~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~l~~~gl~~~ 85 (290)
T 2zvr_A 43 LRKGMELAKRVGYQAVEIAVRDPSIVDWNEVKILSEELNLPIC 85 (290)
T ss_dssp HHHHHHHHHHHTCSEEEEECSCGGGSCHHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHHhCCCEEEEcCCCcchhhHHHHHHHHHHcCCeEE
Confidence 3567888889999999998753 367889999999999884
No 29
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=65.45 E-value=12 Score=33.06 Aligned_cols=65 Identities=9% Similarity=0.106 Sum_probs=47.4
Q ss_pred HHHHHHHHHHcCCeEEecCCc-----CCCChHHHHHHHHHcCCcEEEEecCcc-----cHHHHHHHHHHcCCcee
Q 025874 68 AEVAVQLIHRTGGLAVLAHPW-----ALKNPAAIIRKLKDVGLHGLEVYRSDG-----KLVAYTDLADTYGLLKL 132 (247)
Q Consensus 68 ~~EaI~~Ih~aGGvaVLAHP~-----~~~~~~~li~~l~~~GlDGIEv~~~~~-----~~~~~~~lA~~~gLl~T 132 (247)
++|-|++.|++|=-+..-..+ .....++.+++.++.|+|.||+-...- +..++.+.++++|+.+-
T Consensus 57 l~eki~l~~~~gV~v~~GGTl~E~~~~qg~~~~yl~~~k~lGf~~iEiS~G~i~l~~~~~~~~I~~~~~~G~~v~ 131 (251)
T 1qwg_A 57 VKEKINYYKDWGIKVYPGGTLFEYAYSKGKFDEFLNECEKLGFEAVEISDGSSDISLEERNNAIKRAKDNGFMVL 131 (251)
T ss_dssp HHHHHHHHHTTTCEEEECHHHHHHHHHTTCHHHHHHHHHHHTCCEEEECCSSSCCCHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHcCCeEECCcHHHHHHHHcCcHHHHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHHCCCEEe
Confidence 788999999988443322211 013456889999999999999998752 45678899999998763
No 30
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=65.38 E-value=4.3 Score=33.79 Aligned_cols=40 Identities=15% Similarity=0.107 Sum_probs=23.6
Q ss_pred hHHHHHHHHHcCCcEEEEecCc---ccHHHHHHHHHHcCCcee
Q 025874 93 PAAIIRKLKDVGLHGLEVYRSD---GKLVAYTDLADTYGLLKL 132 (247)
Q Consensus 93 ~~~li~~l~~~GlDGIEv~~~~---~~~~~~~~lA~~~gLl~T 132 (247)
..+.++.+.+.|+||||++.+. .+.+.+.+.++++||-++
T Consensus 20 ~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~l~~~gl~~~ 62 (275)
T 3qc0_A 20 FAEAVDICLKHGITAIAPWRDQVAAIGLGEAGRIVRANGLKLT 62 (275)
T ss_dssp HHHHHHHHHHTTCCEEECBHHHHHHHCHHHHHHHHHHHTCEES
T ss_pred HHHHHHHHHHcCCCEEEeccccccccCHHHHHHHHHHcCCceE
Confidence 3455666666677777765531 244566666666666554
No 31
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=64.76 E-value=6.8 Score=33.09 Aligned_cols=64 Identities=11% Similarity=-0.025 Sum_probs=38.1
Q ss_pred CCCHHHHHHHHHHcCCeEE-ecCCcCCCChHHHHHHHHHcCCcEEEEecCcc-----------cHHHHHHHHHHcCCc
Q 025874 65 EPLAEVAVQLIHRTGGLAV-LAHPWALKNPAAIIRKLKDVGLHGLEVYRSDG-----------KLVAYTDLADTYGLL 130 (247)
Q Consensus 65 ~~~~~EaI~~Ih~aGGvaV-LAHP~~~~~~~~li~~l~~~GlDGIEv~~~~~-----------~~~~~~~lA~~~gLl 130 (247)
..+++++++.++++|--.| +.+++. ....+-+.+.+.|+.=.-++.+.. ......++|++.|.-
T Consensus 30 ~~~~~~~l~~~~~~G~~~vEl~~~~~--~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~ 105 (301)
T 3cny_A 30 DNNLQQLLSDIVVAGFQGTEVGGFFP--GPEKLNYELKLRNLEIAGQWFSSYIIRDGIEKASEAFEKHCQYLKAINAP 105 (301)
T ss_dssp TCCHHHHHHHHHHHTCCEECCCTTCC--CHHHHHHHHHHTTCEECEEEEEECHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CCCHHHHHHHHHHhCCCEEEecCCCC--CHHHHHHHHHHCCCeEEEEeccCCCChhhHHHHHHHHHHHHHHHHHcCCC
Confidence 4689999999999885444 235543 444555556567765332222211 135667888888853
No 32
>3ktc_A Xylose isomerase; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.54A {Pectobacterium atrosepticum SCRI1043}
Probab=64.50 E-value=8.2 Score=33.78 Aligned_cols=41 Identities=22% Similarity=0.183 Sum_probs=33.9
Q ss_pred hHHHHHHHHHc-CCcEEEEecCc---ccHHHHHHHHHHcCCceee
Q 025874 93 PAAIIRKLKDV-GLHGLEVYRSD---GKLVAYTDLADTYGLLKLG 133 (247)
Q Consensus 93 ~~~li~~l~~~-GlDGIEv~~~~---~~~~~~~~lA~~~gLl~TG 133 (247)
..+.++.+.+. |++|||+..+. .+.+.+.++++++||-+++
T Consensus 35 ~~e~l~~aa~~~G~~~VEl~~~~~~~~~~~~l~~~l~~~Gl~i~~ 79 (333)
T 3ktc_A 35 TIDQINAAKEVGELSYVDLPYPFTPGVTLSEVKDALKDAGLKAIG 79 (333)
T ss_dssp HHHHHHHHHHHSSEEEEEEEESCSTTCCHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHhCCCCEEEecCCCcchhHHHHHHHHHHHcCCeEEE
Confidence 46788888899 99999997664 3678899999999998764
No 33
>2g0w_A LMO2234 protein; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE PG4; 1.70A {Listeria monocytogenes} SCOP: c.1.15.4
Probab=64.10 E-value=16 Score=31.10 Aligned_cols=40 Identities=8% Similarity=0.059 Sum_probs=20.4
Q ss_pred HHHHHHHHHcCCcEEEEecC--------cccHHHHHHHHHHcCCceee
Q 025874 94 AAIIRKLKDVGLHGLEVYRS--------DGKLVAYTDLADTYGLLKLG 133 (247)
Q Consensus 94 ~~li~~l~~~GlDGIEv~~~--------~~~~~~~~~lA~~~gLl~TG 133 (247)
.+.++.+.+.|+||||++.. ..+.+.+.+.++++||-+++
T Consensus 39 ~~~l~~a~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~ 86 (296)
T 2g0w_A 39 PKRVKVAAENGFDGIGLRAENYVDALAAGLTDEDMLRILDEHNMKVTE 86 (296)
T ss_dssp HHHHHHHHHTTCSEEEEEHHHHHHHHHTTCCHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHcCCCEEEeCHHHHHHHHhcCCcHHHHHHHHHHcCCceEe
Confidence 34555555556666665532 12344555555666655443
No 34
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=64.06 E-value=11 Score=31.14 Aligned_cols=14 Identities=14% Similarity=0.351 Sum_probs=7.1
Q ss_pred CCHHHHHHHHHHcC
Q 025874 66 PLAEVAVQLIHRTG 79 (247)
Q Consensus 66 ~~~~EaI~~Ih~aG 79 (247)
.+++++++.++++|
T Consensus 14 ~~~~~~l~~~~~~G 27 (278)
T 1i60_A 14 SNLKLDLELCEKHG 27 (278)
T ss_dssp CCHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHhC
Confidence 34555555555554
No 35
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=63.69 E-value=14 Score=33.11 Aligned_cols=22 Identities=18% Similarity=0.122 Sum_probs=16.8
Q ss_pred HHHHHHHHHHcCCeEE--ecCCcC
Q 025874 68 AEVAVQLIHRTGGLAV--LAHPWA 89 (247)
Q Consensus 68 ~~EaI~~Ih~aGGvaV--LAHP~~ 89 (247)
....++.||+.|+.++ |.|+++
T Consensus 85 ~~~~~~~vh~~g~~i~~QL~h~Gr 108 (338)
T 1z41_A 85 FAKLTEQVKEQGSKIGIQLAHAGR 108 (338)
T ss_dssp HHHHHHHHHHTTCEEEEEEECCGG
T ss_pred HHHHHHHHHhcCCEEEEEecCCCc
Confidence 5678889999999644 788654
No 36
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=61.99 E-value=11 Score=33.98 Aligned_cols=24 Identities=21% Similarity=0.153 Sum_probs=18.5
Q ss_pred CCHHHHHHHHHHcCCeEEe--cCCcC
Q 025874 66 PLAEVAVQLIHRTGGLAVL--AHPWA 89 (247)
Q Consensus 66 ~~~~EaI~~Ih~aGGvaVL--AHP~~ 89 (247)
.....+++.||+.|+.+++ .|+++
T Consensus 83 ~~~~~~~~~vh~~G~~i~~QL~H~Gr 108 (340)
T 3gr7_A 83 AGLRELVGLVKEHGAAIGIQLAHAGR 108 (340)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEECCGG
T ss_pred HHHHHHHHHHHhCCCeEEEEeccCCC
Confidence 3567899999999998664 67654
No 37
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=61.57 E-value=12 Score=31.59 Aligned_cols=46 Identities=13% Similarity=0.180 Sum_probs=35.2
Q ss_pred HHHHHHHHHcCCcEEEEecCcc------cHHHHHHHHHHcCCceeec-CCCCC
Q 025874 94 AAIIRKLKDVGLHGLEVYRSDG------KLVAYTDLADTYGLLKLGG-SDYHG 139 (247)
Q Consensus 94 ~~li~~l~~~GlDGIEv~~~~~------~~~~~~~lA~~~gLl~TGG-SDfHG 139 (247)
++.++.+++.|+||||+..... +.+.+.+.++++||-+++. +.+++
T Consensus 24 ~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~g 76 (290)
T 3tva_A 24 GVHLEVAQDLKVPTVQVHAPHPHTRTREHAQAFRAKCDAAGIQVTVIFGGFDG 76 (290)
T ss_dssp SBCHHHHHHTTCSEEEEECCCGGGCSHHHHHHHHHHHHHTTCEEEEEECCCTT
T ss_pred HHHHHHHHHcCCCEEEecCCCCCcCCHHHHHHHHHHHHHcCCEEEEEeeccCC
Confidence 3577888899999999996432 3678889999999987764 34554
No 38
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=60.68 E-value=14 Score=33.74 Aligned_cols=23 Identities=22% Similarity=0.154 Sum_probs=17.6
Q ss_pred CHHHHHHHHHHcCCeEE--ecCCcC
Q 025874 67 LAEVAVQLIHRTGGLAV--LAHPWA 89 (247)
Q Consensus 67 ~~~EaI~~Ih~aGGvaV--LAHP~~ 89 (247)
....+++.||+.|+.++ |.|+++
T Consensus 80 ~~k~l~~avH~~G~~i~~QL~H~Gr 104 (362)
T 4ab4_A 80 GWNNVTKAVHAAGGRIFLQLWHVGR 104 (362)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECCTT
T ss_pred HHHHHHHHHHhcCCEEEEEeccCcc
Confidence 45678899999999866 567654
No 39
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=60.59 E-value=12 Score=31.60 Aligned_cols=42 Identities=12% Similarity=0.052 Sum_probs=32.5
Q ss_pred ChHHHHHHHHHcCCcEEEEecCc------------ccHHHHHHHHHHcCCceee
Q 025874 92 NPAAIIRKLKDVGLHGLEVYRSD------------GKLVAYTDLADTYGLLKLG 133 (247)
Q Consensus 92 ~~~~li~~l~~~GlDGIEv~~~~------------~~~~~~~~lA~~~gLl~TG 133 (247)
...+.++.+.+.|+||||+.... .+...+.++++++||-+++
T Consensus 31 ~~~~~l~~~~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~ 84 (295)
T 3cqj_A 31 CWLERLQLAKTLGFDFVEMSVDETDERLSRLDWSREQRLALVNAIVETGVRVPS 84 (295)
T ss_dssp CHHHHHHHHHHTTCSEEEEECCSSHHHHGGGGCCHHHHHHHHHHHHHHCCEEEE
T ss_pred CHHHHHHHHHhcCCCEEEEecCCcccccCcccCCHHHHHHHHHHHHHcCCeEEE
Confidence 35678888889999999998542 1245788899999998864
No 40
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=60.38 E-value=14 Score=33.74 Aligned_cols=22 Identities=23% Similarity=0.294 Sum_probs=16.1
Q ss_pred HHHHHHHHHHcCCeEE--ecCCcC
Q 025874 68 AEVAVQLIHRTGGLAV--LAHPWA 89 (247)
Q Consensus 68 ~~EaI~~Ih~aGGvaV--LAHP~~ 89 (247)
...+++.||+.|+.++ |.|+++
T Consensus 93 ~k~l~~avh~~G~~i~~QL~H~Gr 116 (376)
T 1icp_A 93 WKPIVDAVHAKGGIFFCQIWHVGR 116 (376)
T ss_dssp HHHHHHHHHHTTCEEEEEEECCTT
T ss_pred HHHHHHHHHhcCCeEEEEeecCCC
Confidence 4567788999999755 677543
No 41
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis}
Probab=59.48 E-value=12 Score=33.95 Aligned_cols=23 Identities=30% Similarity=0.242 Sum_probs=18.0
Q ss_pred CHHHHHHHHHHcCCeEE--ecCCcC
Q 025874 67 LAEVAVQLIHRTGGLAV--LAHPWA 89 (247)
Q Consensus 67 ~~~EaI~~Ih~aGGvaV--LAHP~~ 89 (247)
.....++.||+.|+.++ |.|+++
T Consensus 80 ~~k~l~~avh~~G~~i~~QL~H~Gr 104 (358)
T 4a3u_A 80 AWLPITQAVHDAGGLIFAQLWHMGR 104 (358)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECCGG
T ss_pred HHHHHHHHHHhcCCceeeccccccc
Confidence 45688999999999866 467764
No 42
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=59.38 E-value=13 Score=32.19 Aligned_cols=42 Identities=21% Similarity=0.298 Sum_probs=32.3
Q ss_pred hHHHHHHHHHcCCcEEEEecC--------cc--------cHHHHHHHHHHcCCceeec
Q 025874 93 PAAIIRKLKDVGLHGLEVYRS--------DG--------KLVAYTDLADTYGLLKLGG 134 (247)
Q Consensus 93 ~~~li~~l~~~GlDGIEv~~~--------~~--------~~~~~~~lA~~~gLl~TGG 134 (247)
..+.++.+.++|++|||++.. .. +.+.+.++++++||-+++.
T Consensus 38 l~~~l~~aa~~G~~~VEl~~~~~~~~~~~~~~p~~~~~~~~~~l~~~l~~~GL~i~~~ 95 (305)
T 3obe_A 38 MPNGLNRLAKAGYTDLEIFGYREDTGKFGDYNPKNTTFIASKDYKKMVDDAGLRISSS 95 (305)
T ss_dssp HHHHHHHHHHHTCCEEEECCBCTTTCCBCCC----CCCBCHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHcCCCEEEecccccccccccCcCcccccccCHHHHHHHHHHCCCeEEEe
Confidence 356788888999999999842 11 5678889999999987654
No 43
>2zds_A Putative DNA-binding protein; TIM-barrel fold, structural genomics, NPPSFA; 2.30A {Streptomyces coelicolor}
Probab=59.24 E-value=24 Score=30.27 Aligned_cols=42 Identities=29% Similarity=0.379 Sum_probs=32.5
Q ss_pred ChHHHHHHHHHcCCcEEEEec-Ccc-----------cHHHHHHHHHHcCCceee
Q 025874 92 NPAAIIRKLKDVGLHGLEVYR-SDG-----------KLVAYTDLADTYGLLKLG 133 (247)
Q Consensus 92 ~~~~li~~l~~~GlDGIEv~~-~~~-----------~~~~~~~lA~~~gLl~TG 133 (247)
..++.++.+.+.|++|||+.. +.+ ....+.+.++++||-+++
T Consensus 16 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~ 69 (340)
T 2zds_A 16 PLEEVCRLARDFGYDGLELACWGDHFEVDKALADPSYVDSRHQLLDKYGLKCWA 69 (340)
T ss_dssp CHHHHHHHHHHHTCSEEEEESSTTTCCHHHHHHCTTHHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHHHcCCCEEEeccccccCCccccccCHHHHHHHHHHHHHcCCeEEE
Confidence 346788889999999999975 211 246788999999998864
No 44
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=59.20 E-value=16 Score=33.45 Aligned_cols=23 Identities=22% Similarity=0.196 Sum_probs=17.6
Q ss_pred CHHHHHHHHHHcCCeEE--ecCCcC
Q 025874 67 LAEVAVQLIHRTGGLAV--LAHPWA 89 (247)
Q Consensus 67 ~~~EaI~~Ih~aGGvaV--LAHP~~ 89 (247)
....+++.||+.|+.++ |.|+++
T Consensus 88 ~~k~l~~avH~~G~~i~~QL~H~Gr 112 (361)
T 3gka_A 88 GWRLVTDAVHAAGGRIFLQLWHVGR 112 (361)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECCTT
T ss_pred HHHHHHHHHHhcCCeEEEeeccCCc
Confidence 45678899999999866 467664
No 45
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=58.43 E-value=13 Score=34.68 Aligned_cols=24 Identities=25% Similarity=0.358 Sum_probs=19.2
Q ss_pred CCHHHHHHHHHHcCCeEEe--cCCcC
Q 025874 66 PLAEVAVQLIHRTGGLAVL--AHPWA 89 (247)
Q Consensus 66 ~~~~EaI~~Ih~aGGvaVL--AHP~~ 89 (247)
+....+++.||+.|+.+++ .|+++
T Consensus 104 ~~~k~l~~avh~~G~~i~~QL~H~Gr 129 (419)
T 3l5a_A 104 PGLTNMASTMKQHGSLAIIQLAHAGR 129 (419)
T ss_dssp HHHHHHHHHHHTTSCEEEEEEECCGG
T ss_pred HHHHHHHHHHHhcCCEEEEEeccCCC
Confidence 4567899999999998764 78765
No 46
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=57.00 E-value=16 Score=35.65 Aligned_cols=23 Identities=39% Similarity=0.410 Sum_probs=17.6
Q ss_pred CHHHHHHHHHHcCCeEE--ecCCcC
Q 025874 67 LAEVAVQLIHRTGGLAV--LAHPWA 89 (247)
Q Consensus 67 ~~~EaI~~Ih~aGGvaV--LAHP~~ 89 (247)
...+.++.||+.|+.++ |.|+++
T Consensus 90 ~~~~~~~~vh~~g~~i~~Ql~h~Gr 114 (690)
T 3k30_A 90 ALKRIADAIHEGGGLAGIELAHNGM 114 (690)
T ss_dssp HHHHHHHHHHHTTCEEEEEEECCGG
T ss_pred HHHHHHHHHHhcCCEEEEEccCCcc
Confidence 45688999999999755 478654
No 47
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=56.69 E-value=18 Score=32.70 Aligned_cols=23 Identities=17% Similarity=0.190 Sum_probs=17.7
Q ss_pred CHHHHHHHHHHcCCeEEe--cCCcC
Q 025874 67 LAEVAVQLIHRTGGLAVL--AHPWA 89 (247)
Q Consensus 67 ~~~EaI~~Ih~aGGvaVL--AHP~~ 89 (247)
....+++.||+.|+.+++ .|+++
T Consensus 82 ~~~~~~~~vh~~G~~i~~QL~H~Gr 106 (343)
T 3kru_A 82 ELKKIVDICKANGAVMGIQLAHAGR 106 (343)
T ss_dssp HHHHHHHHHHHTTCEEEEEEECCGG
T ss_pred HHHHHHHHHhcCCceEeeehhhccC
Confidence 456789999999998664 67664
No 48
>3aam_A Endonuclease IV, endoiv; DNA repair, base excision repair, BER, TIM barrel, endonucle hydrolase, structural genomics, NPPSFA; 1.58A {Thermus thermophilus}
Probab=56.41 E-value=14 Score=30.77 Aligned_cols=41 Identities=15% Similarity=0.313 Sum_probs=31.0
Q ss_pred hHHHHHHHHHcCCcEEEEecCc-----------ccHHHHHHHHHHcCC-ceee
Q 025874 93 PAAIIRKLKDVGLHGLEVYRSD-----------GKLVAYTDLADTYGL-LKLG 133 (247)
Q Consensus 93 ~~~li~~l~~~GlDGIEv~~~~-----------~~~~~~~~lA~~~gL-l~TG 133 (247)
..+.++.+.+.|+||||++... .+...+.++++++|| .++.
T Consensus 16 ~~~~~~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~ 68 (270)
T 3aam_A 16 VAGAVEEATALGLTAFQIFAKSPRSWRPRALSPAEVEAFRALREASGGLPAVI 68 (270)
T ss_dssp HHHHHHHHHHHTCSCEEEESSCTTCCSCCCCCHHHHHHHHHHHHHTTCCCEEE
T ss_pred HHHHHHHHHHcCCCEEEEeCCCCCcCcCCCCCHHHHHHHHHHHHHcCCceEEE
Confidence 4567888889999999997521 135678889999999 6554
No 49
>3tjl_A NADPH dehydrogenase; OLD yellow enzyme, flavin mononucleotide, TIM barrel, NADPH oxidoreductase, enone reductase; HET: FMN; 1.50A {Scheffersomyces stipitis cbs 6054} PDB: 3upw_A* 4df2_A*
Probab=55.50 E-value=22 Score=33.20 Aligned_cols=23 Identities=13% Similarity=0.086 Sum_probs=17.7
Q ss_pred CHHHHHHHHHHcCCeEEe--cCCcC
Q 025874 67 LAEVAVQLIHRTGGLAVL--AHPWA 89 (247)
Q Consensus 67 ~~~EaI~~Ih~aGGvaVL--AHP~~ 89 (247)
....+++.||+.|+.+++ .|+++
T Consensus 93 ~~k~l~~avH~~G~~i~~QL~H~Gr 117 (407)
T 3tjl_A 93 AWKVITDKVHANGSFVSTQLIFLGR 117 (407)
T ss_dssp HHHHHHHHHHHTTCEEEEEEECCGG
T ss_pred HHHHHHHHHHhcCCEEEEEeccCCC
Confidence 356789999999998664 67664
No 50
>2x7v_A Probable endonuclease 4; DNA repair protein, metal-binding, hydrolase, DNA damage, DN; 2.30A {Thermotoga maritima MSB8} PDB: 2x7w_A*
Probab=55.04 E-value=15 Score=30.64 Aligned_cols=40 Identities=5% Similarity=0.137 Sum_probs=30.5
Q ss_pred ChHHHHHHHHHcCCcEEEEecCc-----------ccHHHHHHHHHHcCCce
Q 025874 92 NPAAIIRKLKDVGLHGLEVYRSD-----------GKLVAYTDLADTYGLLK 131 (247)
Q Consensus 92 ~~~~li~~l~~~GlDGIEv~~~~-----------~~~~~~~~lA~~~gLl~ 131 (247)
...+.++.+.+.|++|||++... .+...+.+.++++||-+
T Consensus 13 ~~~~~l~~~~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~ 63 (287)
T 2x7v_A 13 GFDRVPQDTVNIGGNSFQIFPHNARSWSAKLPSDEAATKFKREMKKHGIDW 63 (287)
T ss_dssp CGGGHHHHHHHTTCSEEEECSCCCSSSCCCCCCHHHHHHHHHHHHHHTCCG
T ss_pred CHHHHHHHHHHcCCCEEEEeCCCcccccccCCCHHHHHHHHHHHHHcCCCc
Confidence 34577888899999999997421 13567889999999973
No 51
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=54.97 E-value=9.9 Score=31.61 Aligned_cols=40 Identities=13% Similarity=0.027 Sum_probs=24.3
Q ss_pred hHHHHHHHHHcCCcEEEEecCc-------ccHHHHHHHHHHcCCcee
Q 025874 93 PAAIIRKLKDVGLHGLEVYRSD-------GKLVAYTDLADTYGLLKL 132 (247)
Q Consensus 93 ~~~li~~l~~~GlDGIEv~~~~-------~~~~~~~~lA~~~gLl~T 132 (247)
.++.++.+.+.|+||||+.... .+...+.+.++++||-++
T Consensus 18 ~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~gl~~~ 64 (281)
T 3u0h_A 18 LVLYLDLARETGYRYVDVPFHWLEAEAERHGDAAVEAMFQRRGLVLA 64 (281)
T ss_dssp HHHHHHHHHHTTCSEECCCHHHHHHHHHHHCHHHHHHHHHTTTCEEC
T ss_pred HHHHHHHHHHcCCCEEEecHHHHHHHhcccCHHHHHHHHHHcCCceE
Confidence 3456666666777777776432 234566666677776654
No 52
>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*
Probab=53.24 E-value=12 Score=31.99 Aligned_cols=43 Identities=21% Similarity=0.305 Sum_probs=33.8
Q ss_pred hHHHHHHHHHcCCcEEEEecCc------ccHHHHHHHHHHcCCceeecCC
Q 025874 93 PAAIIRKLKDVGLHGLEVYRSD------GKLVAYTDLADTYGLLKLGGSD 136 (247)
Q Consensus 93 ~~~li~~l~~~GlDGIEv~~~~------~~~~~~~~lA~~~gLl~TGGSD 136 (247)
.+. ++.+.+.|+||||+.... .+...+.++++++||-+++.+.
T Consensus 39 l~~-l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~l~~~gl~i~~~~~ 87 (309)
T 2hk0_A 39 GPY-IEKVAKLGFDIIEVAAHHINEYSDAELATIRKSAKDNGIILTAGIG 87 (309)
T ss_dssp HHH-HHHHHHTTCSEEEEEHHHHTTSCHHHHHHHHHHHHHTTCEEEEECC
T ss_pred HHH-HHHHHHhCCCEEEeccCCccccchhhHHHHHHHHHHcCCeEEEecC
Confidence 456 888889999999998532 2357788999999999887543
No 53
>3aal_A Probable endonuclease 4; endoiv, DNA repair, base excision repair, TIM barrel, DNA DA endonuclease, hydrolase, metal-binding; 1.60A {Geobacillus kaustophilus} PDB: 1xp3_A
Probab=53.12 E-value=26 Score=29.86 Aligned_cols=41 Identities=12% Similarity=0.068 Sum_probs=31.8
Q ss_pred hHHHHHHHHHcCCcEEEEecCc-----------ccHHHHHHHHHHcCC-ceee
Q 025874 93 PAAIIRKLKDVGLHGLEVYRSD-----------GKLVAYTDLADTYGL-LKLG 133 (247)
Q Consensus 93 ~~~li~~l~~~GlDGIEv~~~~-----------~~~~~~~~lA~~~gL-l~TG 133 (247)
..+.++.+.+.|+||||++... .+.+.+.+.++++|| .++.
T Consensus 20 ~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~ 72 (303)
T 3aal_A 20 LLAASEEAASYGANTFMIYTGAPQNTKRKSIEELNIEAGRQHMQAHGIEEIVV 72 (303)
T ss_dssp HHHHHHHHHHTTCSEEEEESSCTTCCCCCCSGGGCHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHcCCCEEEEcCCCCCccCCCCCCHHHHHHHHHHHHHcCCceEEE
Confidence 5678888889999999995321 246788999999999 5554
No 54
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=53.06 E-value=69 Score=27.00 Aligned_cols=65 Identities=15% Similarity=0.058 Sum_probs=47.2
Q ss_pred CCHHHHHHHHHHcCCeEEecCCcCCCChHHHHHHHHHcCCcEEEEecCcc-cHHHHHHHHHHc-CCce
Q 025874 66 PLAEVAVQLIHRTGGLAVLAHPWALKNPAAIIRKLKDVGLHGLEVYRSDG-KLVAYTDLADTY-GLLK 131 (247)
Q Consensus 66 ~~~~EaI~~Ih~aGGvaVLAHP~~~~~~~~li~~l~~~GlDGIEv~~~~~-~~~~~~~lA~~~-gLl~ 131 (247)
++..+.++.+.+.+=++|+-.... ....++++.+.+.|++-||+-.... ..+.+.++++++ ++++
T Consensus 5 ~~~~~~~~~l~~~~ii~vir~~~~-~~~~~~~~al~~gGv~~iel~~k~~~~~~~i~~l~~~~~~l~v 71 (224)
T 1vhc_A 5 YTTQQIIEKLRELKIVPVIALDNA-DDILPLADTLAKNGLSVAEITFRSEAAADAIRLLRANRPDFLI 71 (224)
T ss_dssp CCHHHHHHHHHHHCEEEEECCSSG-GGHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHCTTCEE
T ss_pred cchHHHHHHHHHCCeEEEEeCCCH-HHHHHHHHHHHHcCCCEEEEeccCchHHHHHHHHHHhCcCcEE
Confidence 466788999999999999876422 2334678889999999999986543 345566688887 4443
No 55
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=52.32 E-value=18 Score=35.11 Aligned_cols=23 Identities=17% Similarity=0.312 Sum_probs=17.3
Q ss_pred CHHHHHHHHHHcCCeEE--ecCCcC
Q 025874 67 LAEVAVQLIHRTGGLAV--LAHPWA 89 (247)
Q Consensus 67 ~~~EaI~~Ih~aGGvaV--LAHP~~ 89 (247)
.....++.+|+.|+.++ |.|+++
T Consensus 82 ~~~~~~~~vh~~g~~i~~Ql~h~Gr 106 (671)
T 1ps9_A 82 HHRTITEAVHQEGGKIALQILHTGR 106 (671)
T ss_dssp HHHHHHHHHHHTTCCEEEEECCCGG
T ss_pred HHHHHHHHHHhcCCEEEEEeccCCc
Confidence 45678889999999644 788654
No 56
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=52.24 E-value=25 Score=31.81 Aligned_cols=44 Identities=23% Similarity=0.258 Sum_probs=0.0
Q ss_pred HHHHHHHHHHcCCeEEe--cCCcCCCC---------------------------------------------------hH
Q 025874 68 AEVAVQLIHRTGGLAVL--AHPWALKN---------------------------------------------------PA 94 (247)
Q Consensus 68 ~~EaI~~Ih~aGGvaVL--AHP~~~~~---------------------------------------------------~~ 94 (247)
...+++.||+.|+.+++ .|+++... ..
T Consensus 82 ~~~~~~~vh~~G~~i~~QL~H~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~pS~~~~~~~~~~~p~~mt~~eI~~ii~~f~ 161 (363)
T 3l5l_A 82 FVPVVQAIKAAGSVPGIQIAHAGRKASANRPWEGDDHIAADDTRGWETIAPSAIAFGAHLPKVPREMTLDDIARVKQDFV 161 (363)
T ss_dssp HHHHHHHHHHTTCEEEEEEECCGGGCSBCCGGGTSSBCCTTCTTCCCCEESSSCCCBTTBCCCCEECCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCEEEEEeccCCccccccccccccccccccccCCCcccCCCCCccCCCCCCCCccCCHHHHHHHHHHHH
Q ss_pred HHHHHHHHcCCcEEEEe
Q 025874 95 AIIRKLKDVGLHGLEVY 111 (247)
Q Consensus 95 ~li~~l~~~GlDGIEv~ 111 (247)
...+..+++|+||||+.
T Consensus 162 ~aA~~a~~aGfDgVEih 178 (363)
T 3l5l_A 162 DAARRARDAGFEWIELH 178 (363)
T ss_dssp HHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHcCCCEEEEc
No 57
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=52.18 E-value=18 Score=35.70 Aligned_cols=23 Identities=26% Similarity=0.141 Sum_probs=16.8
Q ss_pred CHHHHHHHHHHcCCeEE--ecCCcC
Q 025874 67 LAEVAVQLIHRTGGLAV--LAHPWA 89 (247)
Q Consensus 67 ~~~EaI~~Ih~aGGvaV--LAHP~~ 89 (247)
...+.++.||+.|+.++ |.|+++
T Consensus 85 ~~~~~~~~vh~~g~~i~~Ql~h~Gr 109 (729)
T 1o94_A 85 NLKAMTDEVHKYGALAGVELWYGGA 109 (729)
T ss_dssp HHHHHHHHHHTTTCEEEEEEECCGG
T ss_pred HHHHHHHHHHhCCCeEEEEecCCCc
Confidence 35677889999999654 678544
No 58
>1yx1_A Hypothetical protein PA2260; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.80A {Pseudomonas aeruginosa PAO1} SCOP: c.1.15.7
Probab=51.63 E-value=14 Score=30.80 Aligned_cols=38 Identities=18% Similarity=0.118 Sum_probs=23.2
Q ss_pred HHHHHHHHcCCcEEEEecCc----ccHHHHHHHHHHcCCcee
Q 025874 95 AIIRKLKDVGLHGLEVYRSD----GKLVAYTDLADTYGLLKL 132 (247)
Q Consensus 95 ~li~~l~~~GlDGIEv~~~~----~~~~~~~~lA~~~gLl~T 132 (247)
+.++.+.+.|++|||++... .+...+.+.++++||-++
T Consensus 27 ~~l~~a~~~G~~~vEl~~~~~~~~~~~~~~~~~l~~~gl~i~ 68 (264)
T 1yx1_A 27 SFLPLLAMAGAQRVELREELFAGPPDTEALTAAIQLQGLECV 68 (264)
T ss_dssp GGHHHHHHHTCSEEEEEGGGCSSCCCHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHcCCCEEEEEHHhcCCCHHHHHHHHHHHHcCCEEE
Confidence 35566666777777775321 145666677777777554
No 59
>1qtw_A Endonuclease IV; DNA repair enzyme, TIM barrel, trinuclear Zn cluster, hydrolase; 1.02A {Escherichia coli} SCOP: c.1.15.1 PDB: 1qum_A* 2nqh_A 2nqj_A* 2nq9_A*
Probab=50.70 E-value=24 Score=29.27 Aligned_cols=40 Identities=5% Similarity=0.184 Sum_probs=30.6
Q ss_pred ChHHHHHHHHHcCCcEEEEecC--c---------ccHHHHHHHHHHcCCce
Q 025874 92 NPAAIIRKLKDVGLHGLEVYRS--D---------GKLVAYTDLADTYGLLK 131 (247)
Q Consensus 92 ~~~~li~~l~~~GlDGIEv~~~--~---------~~~~~~~~lA~~~gLl~ 131 (247)
...+.++.+.+.|+||||++.. . .+...+.+.++++||-+
T Consensus 13 ~l~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~ 63 (285)
T 1qtw_A 13 GLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTS 63 (285)
T ss_dssp CHHHHHHHHHHTTCSEEECCSSCSSCSSCCCCCHHHHHHHHHHHHHTTCCG
T ss_pred CHHHHHHHHHHcCCCEEEeeCCCCCcCcCCCCCHHHHHHHHHHHHHcCCCc
Confidence 3567888899999999999632 1 13467888999999974
No 60
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=49.61 E-value=23 Score=31.80 Aligned_cols=44 Identities=18% Similarity=0.200 Sum_probs=0.0
Q ss_pred HHHHHHHHHHcCCeEEe--cCCcCCCChH--------------------------------------------HHHHHHH
Q 025874 68 AEVAVQLIHRTGGLAVL--AHPWALKNPA--------------------------------------------AIIRKLK 101 (247)
Q Consensus 68 ~~EaI~~Ih~aGGvaVL--AHP~~~~~~~--------------------------------------------~li~~l~ 101 (247)
...+++.||+.|+.+++ .|+++..... ...+..+
T Consensus 83 ~~~~~~~vh~~G~~i~~Ql~H~Gr~~~~~~~~~~~~~~~~~~~~pS~~~~~~~~~~p~~mt~~eI~~ii~~f~~aA~~a~ 162 (349)
T 3hgj_A 83 LKELARRIREAGAVPGIQLAHAGRKAGTARPWEGGKPLGWRVVGPSPIPFDEGYPVPEPLDEAGMERILQAFVEGARRAL 162 (349)
T ss_dssp HHHHHHHHHHTTCEEEEEEECCGGGCCBCCGGGTCCBCCCCCEESSSCCSSTTCCCCEECCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCeEEEEeccCCccccccccccccccCCCcccCCCcccccCCCCCCccCCHHHHHHHHHHHHHHHHHHH
Q ss_pred HcCCcEEEEe
Q 025874 102 DVGLHGLEVY 111 (247)
Q Consensus 102 ~~GlDGIEv~ 111 (247)
++|+||||+.
T Consensus 163 ~aGfDgVEih 172 (349)
T 3hgj_A 163 RAGFQVIELH 172 (349)
T ss_dssp HTTCCEEEEE
T ss_pred HcCCCEEEEC
No 61
>2qw5_A Xylose isomerase-like TIM barrel; putative sugar phosphate isomerase/epimerase; 1.78A {Anabaena variabilis atcc 29413}
Probab=49.47 E-value=27 Score=30.20 Aligned_cols=40 Identities=25% Similarity=0.286 Sum_probs=31.9
Q ss_pred HHHHHHHHcCCcEEEEecCc----------ccHHHHHHHHHHcCCc---eeec
Q 025874 95 AIIRKLKDVGLHGLEVYRSD----------GKLVAYTDLADTYGLL---KLGG 134 (247)
Q Consensus 95 ~li~~l~~~GlDGIEv~~~~----------~~~~~~~~lA~~~gLl---~TGG 134 (247)
+.++.+.+.|+||||+.... .+...+.++++++||- +++.
T Consensus 35 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~l~~~gL~~~~i~~~ 87 (335)
T 2qw5_A 35 AHIKKLQRFGYSGFEFPIAPGLPENYAQDLENYTNLRHYLDSEGLENVKISTN 87 (335)
T ss_dssp HHHHHHHHTTCCEEEEECCCCCGGGHHHHHHHHHHHHHHHHHTTCTTCEEEEE
T ss_pred HHHHHHHHhCCCEEEEecCCCcccccccchHHHHHHHHHHHHCCCCcceeEEE
Confidence 68888889999999998542 2346788899999998 7764
No 62
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=48.30 E-value=1.1e+02 Score=27.00 Aligned_cols=96 Identities=20% Similarity=0.231 Sum_probs=61.7
Q ss_pred CCCCCHHHHHH---HHhhCCCCc-eeCCCCCCHHHHHHHHHHcCCeEEecCCcCC----------C---C---hHHHHHH
Q 025874 40 GHVENLKQAFA---RYLYDGGPA-YSTGSEPLAEVAVQLIHRTGGLAVLAHPWAL----------K---N---PAAIIRK 99 (247)
Q Consensus 40 G~v~~~~eaF~---~yL~~g~pa-yv~~~~~~~~EaI~~Ih~aGGvaVLAHP~~~----------~---~---~~~li~~ 99 (247)
+|-.|..++++ +++.-|.-+ .++. .-...+.|+.+.++ |++|.+|=+.. . . .++++++
T Consensus 89 sy~~s~~~a~~na~rl~kaGa~aVklEd-g~e~~~~I~al~~a-gIpV~gHiGLtPQs~~~~ggf~v~grt~~a~~~i~r 166 (275)
T 1o66_A 89 AYQQSKEQAFAAAAELMAAGAHMVKLEG-GVWMAETTEFLQMR-GIPVCAHIGLTPQSVFAFGGYKVQGRGGKAQALLND 166 (275)
T ss_dssp SSSSCHHHHHHHHHHHHHTTCSEEEEEC-SGGGHHHHHHHHHT-TCCEEEEEESCGGGTTC-----------CHHHHHHH
T ss_pred CccCCHHHHHHHHHHHHHcCCcEEEECC-cHHHHHHHHHHHHc-CCCeEeeeccCceeecccCCeEEEeChHHHHHHHHH
Confidence 34457888876 788755433 3333 23467888988876 58999885421 0 1 1344443
Q ss_pred ---HHHcCCcEEEEecCcccHHHHHHHHHHcCCceee---cCCCCC
Q 025874 100 ---LKDVGLHGLEVYRSDGKLVAYTDLADTYGLLKLG---GSDYHG 139 (247)
Q Consensus 100 ---l~~~GlDGIEv~~~~~~~~~~~~lA~~~gLl~TG---GSDfHG 139 (247)
+.++|.|+|-+-... ...+.+++++..++..| |.++-|
T Consensus 167 A~a~~eAGA~~ivlE~vp--~~~a~~it~~l~iP~igIGaG~~~dg 210 (275)
T 1o66_A 167 AKAHDDAGAAVVLMECVL--AELAKKVTETVSCPTIGIGAGADCDG 210 (275)
T ss_dssp HHHHHHTTCSEEEEESCC--HHHHHHHHHHCSSCEEEESSCSCSSE
T ss_pred HHHHHHcCCcEEEEecCC--HHHHHHHHHhCCCCEEEECCCCCCCc
Confidence 447899998665533 35677899999987776 667666
No 63
>3qxb_A Putative xylose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 1.90A {Rhodospirillum rubrum}
Probab=47.76 E-value=26 Score=30.00 Aligned_cols=40 Identities=18% Similarity=0.079 Sum_probs=29.9
Q ss_pred HHHHHHHHcCCcEEEEecCcc-----------cHHHHHHHHHHcCCceeec
Q 025874 95 AIIRKLKDVGLHGLEVYRSDG-----------KLVAYTDLADTYGLLKLGG 134 (247)
Q Consensus 95 ~li~~l~~~GlDGIEv~~~~~-----------~~~~~~~lA~~~gLl~TGG 134 (247)
..++.+.+.|+||||+..... +.+.+.+.++++||-+++.
T Consensus 39 ~~~~~a~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~i~~~ 89 (316)
T 3qxb_A 39 LAGLVRDDLGLEYVQYTYDLTDPWWPDIERDRRAIAYAKAFRKAGLTIEST 89 (316)
T ss_dssp HHHHHHHTSCCCEEEEETTTSCTTSCHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHcCCCEEEeeccccCccccccchhhHHHHHHHHHHHcCCeEEEe
Confidence 445666789999999986421 3567889999999988753
No 64
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=45.29 E-value=1.6e+02 Score=25.87 Aligned_cols=95 Identities=16% Similarity=0.175 Sum_probs=61.7
Q ss_pred CCCCCHHHHHH---HHhhCCCCceeCCC-CCCHHHHHHHHHHcCCeEEecCCcCC----------C---Ch----HHHHH
Q 025874 40 GHVENLKQAFA---RYLYDGGPAYSTGS-EPLAEVAVQLIHRTGGLAVLAHPWAL----------K---NP----AAIIR 98 (247)
Q Consensus 40 G~v~~~~eaF~---~yL~~g~payv~~~-~~~~~EaI~~Ih~aGGvaVLAHP~~~----------~---~~----~~li~ 98 (247)
+|. |..++++ +++.-|.-+ |.-+ .-...+.|+.+.++| ++|.+|=+.. . .. +++++
T Consensus 89 sy~-~~~~a~~~a~rl~kaGa~a-VklEgg~e~~~~I~al~~ag-ipV~gHiGLtPq~v~~~ggf~v~grt~~~a~~~i~ 165 (264)
T 1m3u_A 89 AYA-TPEQAFENAATVMRAGANM-VKIEGGEWLVETVQMLTERA-VPVCGHLGLTPQSVNIFGGYKVQGRGDEAGDQLLS 165 (264)
T ss_dssp SSS-SHHHHHHHHHHHHHTTCSE-EECCCSGGGHHHHHHHHHTT-CCEEEEEESCGGGHHHHTSSCCCCCSHHHHHHHHH
T ss_pred CcC-CHHHHHHHHHHHHHcCCCE-EEECCcHHHHHHHHHHHHCC-CCeEeeecCCceeecccCCeEEEeCCHHHHHHHHH
Confidence 455 8888886 788755433 3322 235678899998875 9999984422 1 11 23444
Q ss_pred ---HHHHcCCcEEEEecCcccHHHHHHHHHHcCCceee---cCCCCC
Q 025874 99 ---KLKDVGLHGLEVYRSDGKLVAYTDLADTYGLLKLG---GSDYHG 139 (247)
Q Consensus 99 ---~l~~~GlDGIEv~~~~~~~~~~~~lA~~~gLl~TG---GSDfHG 139 (247)
.+.++|.|+|-+-... ...+.+++++..++..| |.++-|
T Consensus 166 rA~a~~eAGA~~ivlE~vp--~~~a~~it~~l~iP~igIGag~~~dg 210 (264)
T 1m3u_A 166 DALALEAAGAQLLVLECVP--VELAKRITEALAIPVIGIGAGNVTDG 210 (264)
T ss_dssp HHHHHHHHTCCEEEEESCC--HHHHHHHHHHCSSCEEEESSCTTSSE
T ss_pred HHHHHHHCCCcEEEEecCC--HHHHHHHHHhCCCCEEEeCCCCCCCc
Confidence 3446899998665533 35677899999987765 667666
No 65
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=42.94 E-value=79 Score=26.46 Aligned_cols=77 Identities=16% Similarity=0.017 Sum_probs=50.8
Q ss_pred HHHHhhCCCC-ceeCC-CCCCHHHHHHHHHHcCCeEEecCCcCC---CChHHHHHHHHH-cCCcEEEEecCcccHHHHHH
Q 025874 49 FARYLYDGGP-AYSTG-SEPLAEVAVQLIHRTGGLAVLAHPWAL---KNPAAIIRKLKD-VGLHGLEVYRSDGKLVAYTD 122 (247)
Q Consensus 49 F~~yL~~g~p-ayv~~-~~~~~~EaI~~Ih~aGGvaVLAHP~~~---~~~~~li~~l~~-~GlDGIEv~~~~~~~~~~~~ 122 (247)
+++.+..... .++-. .-.++++.++.+|++|=.+++ ||... ...+..++.|+. .+.|||=- +......
T Consensus 22 l~~al~s~~~~ifll~g~i~~l~~~v~~lk~~~K~v~V-h~Dli~Gls~d~~ai~fL~~~~~pdGIIs-----Tk~~~i~ 95 (192)
T 3kts_A 22 MEKILELDLTYMVMLETHVAQLKALVKYAQAGGKKVLL-HADLVNGLKNDDYAIDFLCTEICPDGIIS-----TRGNAIM 95 (192)
T ss_dssp HHHHTTSSCCEEEECSEETTTHHHHHHHHHHTTCEEEE-EGGGEETCCCSHHHHHHHHHTTCCSEEEE-----SCHHHHH
T ss_pred HHHHHcCCCCEEEEecCcHHHHHHHHHHHHHcCCeEEE-ecCchhccCCcHHHHHHHHhCCCCCEEEe-----CcHHHHH
Confidence 5676655433 23322 447899999999999998888 99753 234456666665 36777533 2346667
Q ss_pred HHHHcCCce
Q 025874 123 LADTYGLLK 131 (247)
Q Consensus 123 lA~~~gLl~ 131 (247)
.|++.||..
T Consensus 96 ~Ak~~gL~t 104 (192)
T 3kts_A 96 KAKQHKMLA 104 (192)
T ss_dssp HHHHTTCEE
T ss_pred HHHHCCCeE
Confidence 788888765
No 66
>2hnh_A DNA polymerase III alpha subunit; DNA replication, nucleotidyltransferase, beta, PHP, transferase; HET: DNA; 2.30A {Escherichia coli} PDB: 2hqa_A*
Probab=41.55 E-value=23 Score=36.39 Aligned_cols=64 Identities=20% Similarity=0.177 Sum_probs=40.9
Q ss_pred HcCCeEEecCCcC-C------CChHHH---HHHHHH-cC-CcEEEEecCc--c---cHHHHHHHHHHcCCceeecCCCCC
Q 025874 77 RTGGLAVLAHPWA-L------KNPAAI---IRKLKD-VG-LHGLEVYRSD--G---KLVAYTDLADTYGLLKLGGSDYHG 139 (247)
Q Consensus 77 ~aGGvaVLAHP~~-~------~~~~~l---i~~l~~-~G-lDGIEv~~~~--~---~~~~~~~lA~~~gLl~TGGSDfHG 139 (247)
..|.+++++||.. . ...+.. +..+.+ .| ---+|+.+.. . .+..+.++|+++|+.++++||.|-
T Consensus 125 ~~glI~isg~~~G~v~~~l~~~~~e~a~~~a~~~~~~f~~~~yLEi~~~~~~~~~~~n~~l~~lA~~~giplVAtnDvHy 204 (910)
T 2hnh_A 125 NEGLILLSGGRMGDVGRSLLRGNSALVDECVAFYEEHFPDRYFLELIRTGRPDEESYLHAAVELAEARGLPVVATNDVRF 204 (910)
T ss_dssp CTTEEEECCGGGSHHHHHHHHTCHHHHHHHHHHHHHHCTTSEEEEECCSSCTTHHHHHHHHHHHHHHHTCCEEECCCBCB
T ss_pred CCCCEEEECCCcchHHHHHhcCCHHHHHHHHHHHHHhcCCCEEEEEcCCCChhHHHHHHHHHHHHHHhCCCEEEeCCccc
Confidence 4577888999942 1 122222 222221 12 1257887643 1 357889999999999999999997
Q ss_pred C
Q 025874 140 R 140 (247)
Q Consensus 140 ~ 140 (247)
.
T Consensus 205 ~ 205 (910)
T 2hnh_A 205 I 205 (910)
T ss_dssp S
T ss_pred C
Confidence 5
No 67
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=41.05 E-value=64 Score=28.20 Aligned_cols=92 Identities=12% Similarity=0.125 Sum_probs=57.0
Q ss_pred HHHHHHHHHcCCCCCHHHHHHHHhhCCCCceeCCCCCCHHHHHHHHHHcCCeEEecCCcCCCChHHHHHHHHHcCCcEEE
Q 025874 30 LHVARAMVEAGHVENLKQAFARYLYDGGPAYSTGSEPLAEVAVQLIHRTGGLAVLAHPWALKNPAAIIRKLKDVGLHGLE 109 (247)
Q Consensus 30 pHIA~aLv~~G~v~~~~eaF~~yL~~g~payv~~~~~~~~EaI~~Ih~aGGvaVLAHP~~~~~~~~li~~l~~~GlDGIE 109 (247)
..|+++|.+.|+-. +.-.| + -.|..+|.- -+.+++++.+.+..++.+.+|- .+ .+.++...+.|++.|-
T Consensus 33 ~~i~~~L~~~Gv~~-IE~g~---~--~~~~~~~~~-~d~~~~~~~~~~~~~~~~~~l~---~~-~~~i~~a~~aG~~~v~ 101 (302)
T 2ftp_A 33 IRLVDDLSAAGLDY-IEVGS---F--VSPKWVPQM-AGSAEVFAGIRQRPGVTYAALA---PN-LKGFEAALESGVKEVA 101 (302)
T ss_dssp HHHHHHHHHTTCSE-EEEEE---C--SCTTTCGGG-TTHHHHHHHSCCCTTSEEEEEC---CS-HHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHcCcCE-EEECC---C--cCccccccc-cCHHHHHHHhhhcCCCEEEEEe---CC-HHHHHHHHhCCcCEEE
Confidence 45788888888621 11100 1 012223321 2566777777666788887774 23 3567778889999999
Q ss_pred EecCccc-----------------HHHHHHHHHHcCCcee
Q 025874 110 VYRSDGK-----------------LVAYTDLADTYGLLKL 132 (247)
Q Consensus 110 v~~~~~~-----------------~~~~~~lA~~~gLl~T 132 (247)
++-+..+ .....++|+++|+-+.
T Consensus 102 i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~V~ 141 (302)
T 2ftp_A 102 VFAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVR 141 (302)
T ss_dssp EEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred EEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEE
Confidence 8755421 2466789999999873
No 68
>1u83_A Phosphosulfolactate synthase; structural genomics, phosphosulfolactate PSI, protein structure initiative, midwest center for struc genomics; 2.20A {Bacillus subtilis} SCOP: c.1.27.1
Probab=40.21 E-value=54 Score=29.21 Aligned_cols=63 Identities=13% Similarity=0.019 Sum_probs=43.8
Q ss_pred HHHHHHHHHHcCCeEEecCCcC-----CCChHHHHHHHHHcCCcEEEEecCcc-----cHHHHHHHHHHcCCce
Q 025874 68 AEVAVQLIHRTGGLAVLAHPWA-----LKNPAAIIRKLKDVGLHGLEVYRSDG-----KLVAYTDLADTYGLLK 131 (247)
Q Consensus 68 ~~EaI~~Ih~aGGvaVLAHP~~-----~~~~~~li~~l~~~GlDGIEv~~~~~-----~~~~~~~lA~~~gLl~ 131 (247)
++|-|++.|++|=-+..-..+. ....++.+++.++.|+|.||+-...- +...+.+.|++. +.+
T Consensus 82 l~ekI~l~~~~gV~v~~GGTlfE~~l~qg~~~~yl~~~k~lGF~~IEISdGti~l~~~~~~~lI~~a~~~-f~V 154 (276)
T 1u83_A 82 LEEKISTLKEHDITFFFGGTLFEKYVSQKKVNEFHRYCTYFGCEYIEISNGTLPMTNKEKAAYIADFSDE-FLV 154 (276)
T ss_dssp HHHHHHHHHHTTCEEEECHHHHHHHHHTTCHHHHHHHHHHTTCSEEEECCSSSCCCHHHHHHHHHHHTTT-SEE
T ss_pred HHHHHHHHHHcCCeEeCCcHHHHHHHHcCcHHHHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHhh-cEE
Confidence 9999999999984444322110 12456889999999999999998752 345566667666 533
No 69
>1bxb_A Xylose isomerase; xylose metabolism; 2.20A {Thermus thermophilus} SCOP: c.1.15.3 PDB: 1bxc_A
Probab=40.07 E-value=30 Score=31.11 Aligned_cols=42 Identities=21% Similarity=0.369 Sum_probs=32.2
Q ss_pred ChHHHHHHHHHcCCcEEEEe----cCcc--------cHHHHHHHHHHcCCceee
Q 025874 92 NPAAIIRKLKDVGLHGLEVY----RSDG--------KLVAYTDLADTYGLLKLG 133 (247)
Q Consensus 92 ~~~~li~~l~~~GlDGIEv~----~~~~--------~~~~~~~lA~~~gLl~TG 133 (247)
...+.++.+.+.|++|||+. .+.. ....+.++++++||-+++
T Consensus 34 ~~~e~l~~aa~~G~~~vEl~~~~~~p~~~~~~e~~~~~~~l~~~l~~~GL~i~~ 87 (387)
T 1bxb_A 34 DPVYVVHKLAELGAYGVNLHDEDLIPRGTPPQERDQIVRRFKKALDETGLKVPM 87 (387)
T ss_dssp CHHHHHHHHHHHTCSEEEEEHHHHSCTTCCTTHHHHHHHHHHHHHHHHTCBCCE
T ss_pred CHHHHHHHHHHhCCCEEEecCcccCCCCCChhhhHHHHHHHHHHHHHhCCEEEE
Confidence 34577888888999999998 5432 356788999999998753
No 70
>1xla_A D-xylose isomerase; isomerase(intramolecular oxidoreductase); 2.30A {Arthrobacter SP} SCOP: c.1.15.3 PDB: 1die_A* 1did_A 1xlb_A 1xlc_A* 1xld_A* 1xle_A 1xlf_A* 1xlg_A* 1xlh_A 1xli_A* 1xlj_A* 1xlk_A 1xll_A 1xlm_A* 4xia_A* 5xia_A*
Probab=39.40 E-value=21 Score=32.18 Aligned_cols=42 Identities=19% Similarity=0.208 Sum_probs=32.6
Q ss_pred hHHHHHHHHHcCCcEEEEecC----c--------ccHHHHHHHHHHcCCceeec
Q 025874 93 PAAIIRKLKDVGLHGLEVYRS----D--------GKLVAYTDLADTYGLLKLGG 134 (247)
Q Consensus 93 ~~~li~~l~~~GlDGIEv~~~----~--------~~~~~~~~lA~~~gLl~TGG 134 (247)
..+.++.+.+.|++|||+... . .....+.+.++++||-+++-
T Consensus 35 l~e~l~~aa~~G~d~VEl~~~~~~~~~~~~~~~~~~~~~l~~~l~~~GL~i~~~ 88 (394)
T 1xla_A 35 PVEAVHKLAELGAYGITFHDNDLIPFDATEAEREKILGDFNQALKDTGLKVPMV 88 (394)
T ss_dssp HHHHHHHHHHHTCCEEEEEHHHHSCTTCCHHHHHHHHHHHHHHHHHHCCBCCEE
T ss_pred HHHHHHHHHHcCCCEEEecCCccCcccCCchhhHHHHHHHHHHHHHcCCeEEEE
Confidence 567888888999999999852 1 13567888999999987653
No 71
>2hpi_A DNA polymerase III alpha subunit; POL-beta-like nucleotidyltransferase fold, transferase; HET: DNA; 3.00A {Thermus aquaticus} PDB: 2hpm_A* 3e0d_A*
Probab=39.37 E-value=23 Score=37.68 Aligned_cols=72 Identities=18% Similarity=0.093 Sum_probs=45.6
Q ss_pred CCHHHHHHHHHHcCCeEEecCCcCC-------CChHHH---HHHHHH-cCCc--EEEEecCcc-----cHHHHHHHHHHc
Q 025874 66 PLAEVAVQLIHRTGGLAVLAHPWAL-------KNPAAI---IRKLKD-VGLH--GLEVYRSDG-----KLVAYTDLADTY 127 (247)
Q Consensus 66 ~~~~EaI~~Ih~aGGvaVLAHP~~~-------~~~~~l---i~~l~~-~GlD--GIEv~~~~~-----~~~~~~~lA~~~ 127 (247)
++.+...+ |..|.+++.+||... .+.+.. +..+.+ .| | -||+-.... -+..+.++|+++
T Consensus 127 i~~e~L~~--~~eGlI~lsg~~~Gev~~~l~~g~~e~a~~~a~~~~~~Fg-~~~yLEIq~~g~~~~~~~n~~l~~LA~e~ 203 (1220)
T 2hpi_A 127 IDREILRE--HAQGLIALSGCLGAEIPQFILQDRLDLAEARLNEDLSIFG-DRFFIEIQNHGLPEQKKVNQVLKEFARKY 203 (1220)
T ss_dssp ECHHHHHH--TCTTEEEECCSTTBHHHHHHHTTCHHHHHHHHHHHHHHHG-GGEEEEECCSSCHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHh--hcCCcEEEECCccchHHHHHhcCCHHHHHHHHHHHHHHhC-CCEEEEEeCCCCchHHHHHHHHHHHHHHc
Confidence 45444333 556778888998421 122222 222322 23 4 789976532 357889999999
Q ss_pred CCceeecCCCCCC
Q 025874 128 GLLKLGGSDYHGR 140 (247)
Q Consensus 128 gLl~TGGSDfHG~ 140 (247)
|+.+.++||.|-.
T Consensus 204 glPlVATnDvHy~ 216 (1220)
T 2hpi_A 204 GLGMVATNDGHYV 216 (1220)
T ss_dssp TCCEEECCCBSBS
T ss_pred CCCEEeecCcccc
Confidence 9999999999964
No 72
>1muw_A Xylose isomerase; atomic resolution, disorder; 0.86A {Streptomyces olivochromogenes} SCOP: c.1.15.3 PDB: 1s5m_A* 1s5n_A* 2gyi_A* 1xyb_A* 1xyc_A* 1xya_A* 1xyl_A 1xym_A* 1dxi_A 3gnx_A* 1gw9_A* 1xib_A 1xic_A* 1xid_A* 1xie_A* 1xif_A* 1xig_A* 1xih_A* 1xii_A* 1xij_A ...
Probab=38.70 E-value=28 Score=31.19 Aligned_cols=42 Identities=17% Similarity=0.359 Sum_probs=32.5
Q ss_pred hHHHHHHHHHcCCcEEEEec----Cc--------ccHHHHHHHHHHcCCceeec
Q 025874 93 PAAIIRKLKDVGLHGLEVYR----SD--------GKLVAYTDLADTYGLLKLGG 134 (247)
Q Consensus 93 ~~~li~~l~~~GlDGIEv~~----~~--------~~~~~~~~lA~~~gLl~TGG 134 (247)
..+.++.+.+.|++|||++. +. .....+.++++++||-+++-
T Consensus 35 ~~e~l~~aa~~G~~~VEl~~~~~~p~~~~~~~~~~~~~~l~~~l~~~GL~i~~~ 88 (386)
T 1muw_A 35 PVETVQRLAELGAHGVTFHDDDLIPFGSSDTERESHIKRFRQALDATGMTVPMA 88 (386)
T ss_dssp HHHHHHHHHHHTCCEEEEEHHHHSCTTCCHHHHHHHHHHHHHHHHHHTCBCCEE
T ss_pred HHHHHHHHHHcCCCEEEeeCCCCCcccCcccccHHHHHHHHHHHHHhCCeEEEE
Confidence 56788888899999999985 21 13567889999999987653
No 73
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=38.62 E-value=1.3e+02 Score=25.38 Aligned_cols=59 Identities=19% Similarity=0.141 Sum_probs=42.5
Q ss_pred HHHHHHHHHHcCCeEEecCCcCCCChHHHHHHHHHcCCcEEEEecCcc-cHHHHHHHHHHc
Q 025874 68 AEVAVQLIHRTGGLAVLAHPWALKNPAAIIRKLKDVGLHGLEVYRSDG-KLVAYTDLADTY 127 (247)
Q Consensus 68 ~~EaI~~Ih~aGGvaVLAHP~~~~~~~~li~~l~~~GlDGIEv~~~~~-~~~~~~~lA~~~ 127 (247)
..+.++.+.+.+=++|+-.... ....++++.+.+.|++-||+-.... ..+.+.++++++
T Consensus 16 ~~~~~~~l~~~~ii~V~r~~~~-~~~~~~~~al~~gGv~~iel~~k~~~~~~~i~~l~~~~ 75 (225)
T 1mxs_A 16 AARIDAICEKARILPVITIARE-EDILPLADALAAGGIRTLEVTLRSQHGLKAIQVLREQR 75 (225)
T ss_dssp HHHHHHHHHHHSEEEEECCSCG-GGHHHHHHHHHHTTCCEEEEESSSTHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHCCEEEEEeCCCH-HHHHHHHHHHHHCCCCEEEEecCCccHHHHHHHHHHhC
Confidence 4567888999998899876422 2334678889999999999986443 334555577777
No 74
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=38.13 E-value=66 Score=27.76 Aligned_cols=70 Identities=13% Similarity=0.186 Sum_probs=50.5
Q ss_pred ceeCCCCCCHHHHHHHHHHcC-CeEEecCCcCCCChHHHHHHHHHcCCcEEEEecCc-ccHHHHHHHHHHcCCc
Q 025874 59 AYSTGSEPLAEVAVQLIHRTG-GLAVLAHPWALKNPAAIIRKLKDVGLHGLEVYRSD-GKLVAYTDLADTYGLL 130 (247)
Q Consensus 59 ayv~~~~~~~~EaI~~Ih~aG-GvaVLAHP~~~~~~~~li~~l~~~GlDGIEv~~~~-~~~~~~~~lA~~~gLl 130 (247)
-|||--...+ ++|+.|++.. -+.+-+|=. ..+++..++.+.++|.|.|=+..-. .+..+..+.++++|+.
T Consensus 65 ~FVpnit~G~-~~v~~lr~~~p~~~ldvHLm-v~~p~~~i~~~~~aGAd~itvH~Ea~~~~~~~i~~ir~~G~k 136 (246)
T 3inp_A 65 HYVPNLTFGP-MVLKALRDYGITAGMDVHLM-VKPVDALIESFAKAGATSIVFHPEASEHIDRSLQLIKSFGIQ 136 (246)
T ss_dssp SSSSCBCCCH-HHHHHHHHHTCCSCEEEEEE-CSSCHHHHHHHHHHTCSEEEECGGGCSCHHHHHHHHHTTTSE
T ss_pred CcCcchhcCH-HHHHHHHHhCCCCeEEEEEe-eCCHHHHHHHHHHcCCCEEEEccccchhHHHHHHHHHHcCCe
Confidence 4666555554 5888888887 788888854 3456678888999999999776532 3567778888888763
No 75
>1xim_A D-xylose isomerase; isomerase(intramolecular oxidoreductse); HET: XYL; 2.20A {Actinoplanes missouriensis} SCOP: c.1.15.3 PDB: 4xim_A 5xim_A* 6xim_A* 7xim_A 8xim_A* 9xim_A* 3xin_A 2xim_A* 5xin_A* 1xin_A* 1bhw_A* 2xin_A* 3xim_A*
Probab=38.06 E-value=28 Score=31.38 Aligned_cols=40 Identities=23% Similarity=0.424 Sum_probs=30.8
Q ss_pred hHHHHHHHHHcCCcEEEEe----cCcc--------cHHHHHHHHHHcCCcee
Q 025874 93 PAAIIRKLKDVGLHGLEVY----RSDG--------KLVAYTDLADTYGLLKL 132 (247)
Q Consensus 93 ~~~li~~l~~~GlDGIEv~----~~~~--------~~~~~~~lA~~~gLl~T 132 (247)
..+.++.+.+.|++|||+. .+.. ....+.+.++++||-++
T Consensus 35 ~~e~l~~aa~~G~~~VEl~~~~l~p~~~~~~~~~~~~~~l~~~l~~~GL~i~ 86 (393)
T 1xim_A 35 PVEAVHKLAEIGAYGITFHDDDLVPFGSDAQTRDGIIAGFKKALDETGLIVP 86 (393)
T ss_dssp HHHHHHHHHHHTCSEEECBHHHHSCTTCCHHHHHHHHHHHHHHHHHHTCBCC
T ss_pred HHHHHHHHHHhCCCEEEeecccCCCccccccccHHHHHHHHHHHHHhCCEEE
Confidence 4567888888899999997 5532 34678889999999874
No 76
>3ks6_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Agrobacterium tumefaciens str} PDB: 3ks5_A*
Probab=37.49 E-value=20 Score=30.47 Aligned_cols=43 Identities=21% Similarity=0.298 Sum_probs=30.1
Q ss_pred HHHHHHHHHHcCCeEEecCCcCCCChHHHHHHHHHcCCcEEEEecCc
Q 025874 68 AEVAVQLIHRTGGLAVLAHPWALKNPAAIIRKLKDVGLHGLEVYRSD 114 (247)
Q Consensus 68 ~~EaI~~Ih~aGGvaVLAHP~~~~~~~~li~~l~~~GlDGIEv~~~~ 114 (247)
..+.|+.+|++| +.|. +|..+. .+.++.+.+.|+|||=.-+|.
T Consensus 193 ~~~~v~~~~~~G-~~V~--~WTvn~-~~~~~~l~~~GVDgIiTD~P~ 235 (250)
T 3ks6_A 193 DAGLMAQVQAAG-LDFG--CWAAHT-PSQITKALDLGVKVFTTDRPT 235 (250)
T ss_dssp CHHHHHHHHHTT-CEEE--EECCCS-HHHHHHHHHHTCSEEEESCHH
T ss_pred CHHHHHHHHHCC-CEEE--EEeCCC-HHHHHHHHHcCCCEEEcCCHH
Confidence 356888888875 5564 444444 467788889999998766553
No 77
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=36.51 E-value=1e+02 Score=25.67 Aligned_cols=61 Identities=13% Similarity=0.100 Sum_probs=43.2
Q ss_pred HHHHHHHHcCCeEEecCCcCCCChHHHHHHHHHcCCcEEEEecCcc-cHHHHHHHHHHc-CCce
Q 025874 70 VAVQLIHRTGGLAVLAHPWALKNPAAIIRKLKDVGLHGLEVYRSDG-KLVAYTDLADTY-GLLK 131 (247)
Q Consensus 70 EaI~~Ih~aGGvaVLAHP~~~~~~~~li~~l~~~GlDGIEv~~~~~-~~~~~~~lA~~~-gLl~ 131 (247)
+.++.+.+.+=++|+-.... ....++++.+.+.|++-||+-.... ..+.+.++++++ ++++
T Consensus 8 ~~~~~l~~~~~i~v~r~~~~-~~~~~~~~al~~gGv~~iel~~k~~~~~~~i~~l~~~~~~~~v 70 (214)
T 1wbh_A 8 SAESILTTGPVVPVIVVKKL-EHAVPMAKALVAGGVRVLNVTLRTECAVDAIRAIAKEVPEAIV 70 (214)
T ss_dssp CHHHHHHSCSEEEEECCSSG-GGHHHHHHHHHHTTCCEEEEESCSTTHHHHHHHHHHHCTTSEE
T ss_pred HHHHHHHHCCEEEEEECCCH-HHHHHHHHHHHHcCCCEEEEeCCChhHHHHHHHHHHHCcCCEE
Confidence 46778888998999977432 2334678889999999999986543 345556688877 3443
No 78
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=36.34 E-value=57 Score=30.01 Aligned_cols=22 Identities=23% Similarity=0.274 Sum_probs=15.7
Q ss_pred HHHHHHHHHHcCCeEE--ecCCcC
Q 025874 68 AEVAVQLIHRTGGLAV--LAHPWA 89 (247)
Q Consensus 68 ~~EaI~~Ih~aGGvaV--LAHP~~ 89 (247)
...+++.||+.|+.++ |.|+++
T Consensus 95 ~k~l~~avh~~G~~i~~QL~H~Gr 118 (402)
T 2hsa_B 95 WKKIVDVVHAKGAVIFCQLWHVGR 118 (402)
T ss_dssp HHHHHHHHHHTTCEEEEEEECCTT
T ss_pred HHHHHHHHHhcCCeEEEEeccCCc
Confidence 4567889999999754 567543
No 79
>1vkf_A Glycerol uptake operon antiterminator-related Pro; struc genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: CIT; 1.65A {Thermotoga maritima} SCOP: c.1.29.1
Probab=35.29 E-value=1.2e+02 Score=25.23 Aligned_cols=60 Identities=13% Similarity=0.109 Sum_probs=42.4
Q ss_pred CCHHHHHHHHHHcCCeEEecCCcCCC---ChHHHHHHHHHcCCcEEEEecCcccHHHHHHHHHHcCCce
Q 025874 66 PLAEVAVQLIHRTGGLAVLAHPWALK---NPAAIIRKLKDVGLHGLEVYRSDGKLVAYTDLADTYGLLK 131 (247)
Q Consensus 66 ~~~~EaI~~Ih~aGGvaVLAHP~~~~---~~~~li~~l~~~GlDGIEv~~~~~~~~~~~~lA~~~gLl~ 131 (247)
.+++++++.+|++ |..|.-||.... ..+..++.+...+.|||=- +.......|+++||..
T Consensus 43 ~~L~~iv~~ik~~-gK~vivh~DlI~GLs~d~~ai~fL~~~~pdGIIs-----Tk~~~i~~Akk~GL~t 105 (188)
T 1vkf_A 43 LNLKFHLKILKDR-GKTVFVDMDFVNGLGEGEEAILFVKKAGADGIIT-----IKPKNYVVAKKNGIPA 105 (188)
T ss_dssp TTHHHHHHHHHHT-TCEEEEEGGGEETCCSSHHHHHHHHHHTCSEEEE-----SCHHHHHHHHHTTCCE
T ss_pred HHHHHHHHHHHHC-CCeEEEecCcccccCCCHHHHHHHHhcCCCEEEc-----CcHHHHHHHHHcCCEE
Confidence 5699999999999 799999997542 2344555554567777532 2346677888888765
No 80
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=35.12 E-value=63 Score=29.17 Aligned_cols=22 Identities=18% Similarity=0.072 Sum_probs=15.7
Q ss_pred HHHHHHHHHHcCCeEE--ecCCcC
Q 025874 68 AEVAVQLIHRTGGLAV--LAHPWA 89 (247)
Q Consensus 68 ~~EaI~~Ih~aGGvaV--LAHP~~ 89 (247)
...+++.||+.|+.++ |.|+++
T Consensus 83 ~~~l~~~vh~~g~~i~~QL~H~Gr 106 (364)
T 1vyr_A 83 WKKITAGVHAEDGRIAVQLWHTGR 106 (364)
T ss_dssp HHHHHHHHHHTTCCEEEEEECCTT
T ss_pred HHHHHHHHHhcCCeEEEEeccCCc
Confidence 5667888999998644 567543
No 81
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=34.14 E-value=62 Score=29.47 Aligned_cols=21 Identities=29% Similarity=0.284 Sum_probs=15.3
Q ss_pred HHHHHHHHHHcCCeEE--ecCCc
Q 025874 68 AEVAVQLIHRTGGLAV--LAHPW 88 (247)
Q Consensus 68 ~~EaI~~Ih~aGGvaV--LAHP~ 88 (247)
...+++.||+.|+.++ |.|++
T Consensus 87 ~k~l~~avh~~G~~i~~QL~H~G 109 (377)
T 2r14_A 87 WKGVVEAVHAKGGRIALQLWHVG 109 (377)
T ss_dssp HHHHHHHHHHTTCCEEEEEECCT
T ss_pred HHHHHHHHhhcCCeEEEEccCCc
Confidence 5667888999998644 56754
No 82
>2eja_A URO-D, UPD, uroporphyrinogen decarboxylase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 1.90A {Aquifex aeolicus}
Probab=33.86 E-value=42 Score=29.54 Aligned_cols=64 Identities=13% Similarity=0.083 Sum_probs=42.8
Q ss_pred CCHHHHHHHHHHcCCeEEecCCcCCCChHHHHHHHHHcCCcEEEEecCcccHHHHHHHHHHcCCceeecCC
Q 025874 66 PLAEVAVQLIHRTGGLAVLAHPWALKNPAAIIRKLKDVGLHGLEVYRSDGKLVAYTDLADTYGLLKLGGSD 136 (247)
Q Consensus 66 ~~~~EaI~~Ih~aGGvaVLAHP~~~~~~~~li~~l~~~GlDGIEv~~~~~~~~~~~~lA~~~gLl~TGGSD 136 (247)
|...+.++.+++.+|+.++-|.... ...++.+.+.|+|++-+-+ ..+...+.+. +++.+.||=|
T Consensus 217 p~~k~i~~~i~~~~g~~~i~~~~g~---~~~l~~l~~~g~d~~~~d~-~~dl~~~~~~---~~~~l~Gn~d 280 (338)
T 2eja_A 217 PYVNYLISELKDFSDTPVIYFFRGS---SSFIDLAVDYRADALSVDW-SVDIPELFKI---YDKGFQGNLE 280 (338)
T ss_dssp HHHHHHHHHHHHHCCCCEEEEESSH---HHHHHHHTTSCCSEEECCT-TSCHHHHHHH---CCSEEECCBC
T ss_pred HHHHHHHHHHhhcCCCCEEEEcCCc---HHHHHHHHHcCCCEEEeCC-CCCHHHHHHh---CCeEEEECCC
Confidence 4455778899887568899997532 4688889999999887643 2344433332 2566666655
No 83
>2ktl_A Tyrosyl-tRNA synthetase; S4 fold, aminoacyl-tRNA synthetase, ligase; NMR {Aspergillus nidulans fgsc A4}
Probab=33.84 E-value=25 Score=28.93 Aligned_cols=30 Identities=23% Similarity=0.433 Sum_probs=25.2
Q ss_pred HHHHHHHcCCCCCHHHHHHHHhhCCCCceeCC
Q 025874 32 VARAMVEAGHVENLKQAFARYLYDGGPAYSTG 63 (247)
Q Consensus 32 IA~aLv~~G~v~~~~eaF~~yL~~g~payv~~ 63 (247)
|.++|++.|++.|..|| +|.+.+|+ +||-.
T Consensus 52 ivdlLv~aGLa~SKsEA-RRlI~qGG-v~VNg 81 (164)
T 2ktl_A 52 FSKVLWSAGLVASKSEG-QRIINNNG-AYVGS 81 (164)
T ss_dssp HHHHHHHHTSCSTHHHH-HHHHHHTC-EEEEE
T ss_pred HHHHHHHhCcccCHHHH-HHHHHhCC-EEECC
Confidence 99999999999999998 78887776 56644
No 84
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=33.64 E-value=62 Score=26.38 Aligned_cols=92 Identities=8% Similarity=-0.048 Sum_probs=46.6
Q ss_pred CHHHHHHHHhhCCCCceeCCCCCCHHHHHHHHHHcCCeEEecCCcC-------CCChHHHHHHHHHcCCcEEEEecCcc-
Q 025874 44 NLKQAFARYLYDGGPAYSTGSEPLAEVAVQLIHRTGGLAVLAHPWA-------LKNPAAIIRKLKDVGLHGLEVYRSDG- 115 (247)
Q Consensus 44 ~~~eaF~~yL~~g~payv~~~~~~~~EaI~~Ih~aGGvaVLAHP~~-------~~~~~~li~~l~~~GlDGIEv~~~~~- 115 (247)
+.....+.++.-|.....-..... .+.++.+++.||+++++.=-. ....+.+.....+.|++|+-+....-
T Consensus 66 t~~~~v~~~~~~Gad~vtvh~~~g-~~~i~~~~~~~gv~vl~~t~~~~~~~~~~~~v~~~~~~a~~~G~~G~~~~~~~~~ 144 (208)
T 2czd_A 66 TNRLIARKVFGAGADYVIVHTFVG-RDSVMAVKELGEIIMVVEMSHPGALEFINPLTDRFIEVANEIEPFGVIAPGTRPE 144 (208)
T ss_dssp HHHHHHHHHHHTTCSEEEEESTTC-HHHHHHHHTTSEEEEECCCCSGGGGTTTGGGHHHHHHHHHHHCCSEEECCCSSTH
T ss_pred HHHHHHHHHHhcCCCEEEEeccCC-HHHHHHHHHhCCcEEEEecCCcchhhHHHHHHHHHHHHHHHhCCcEEEECCCChH
Confidence 333333455555543221112233 457999999999999987211 01122344455678999985554322
Q ss_pred cHHHHHHHHHHcCCceeecCC
Q 025874 116 KLVAYTDLADTYGLLKLGGSD 136 (247)
Q Consensus 116 ~~~~~~~lA~~~gLl~TGGSD 136 (247)
..+.+++.+...-++++||=.
T Consensus 145 ~i~~lr~~~~~~~~iv~gGI~ 165 (208)
T 2czd_A 145 RIGYIRDRLKEGIKILAPGIG 165 (208)
T ss_dssp HHHHHHHHSCTTCEEEECCCC
T ss_pred HHHHHHHhCCCCeEEEECCCC
Confidence 233344433211135666643
No 85
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=33.46 E-value=54 Score=29.63 Aligned_cols=23 Identities=17% Similarity=0.109 Sum_probs=16.1
Q ss_pred CHHHHHHHHHHcCCeEE--ecCCcC
Q 025874 67 LAEVAVQLIHRTGGLAV--LAHPWA 89 (247)
Q Consensus 67 ~~~EaI~~Ih~aGGvaV--LAHP~~ 89 (247)
....+++.||+.|+.++ |.|+++
T Consensus 82 ~~~~l~~~vh~~g~~i~~QL~H~Gr 106 (365)
T 2gou_A 82 GWRIVTEAVHAKGCAIFAQLWHVGR 106 (365)
T ss_dssp HHHHHHHHHHHHSCEEEEEEECCTT
T ss_pred HHHHHHHHHHhcCCeEEEEeecCCC
Confidence 35667888999999744 567443
No 86
>1xx1_A Smase I, sphingomyelinase I; structure, quick cryo-soaking, activity, smase D, hydrolase; HET: EPE; 1.75A {Loxosceles laeta} PDB: 2f9r_A*
Probab=32.80 E-value=26 Score=30.01 Aligned_cols=27 Identities=37% Similarity=0.420 Sum_probs=20.1
Q ss_pred eEEecCCcCCCChHHHHHHHHHcCCcEEEE
Q 025874 81 LAVLAHPWALKNPAAIIRKLKDVGLHGLEV 110 (247)
Q Consensus 81 vaVLAHP~~~~~~~~li~~l~~~GlDGIEv 110 (247)
+.|+||+- |.-..++...+.|.|+||+
T Consensus 7 ~~iiaHrE---NTl~Af~~A~~~Gad~IE~ 33 (285)
T 1xx1_A 7 IWNLAHMV---NAVAQIPDFLDLGANALEA 33 (285)
T ss_dssp EEEEESCC---CSTTHHHHHHHHTCSEEEE
T ss_pred cEEEEehh---ccHHHHHHHHHhCCCEEEE
Confidence 35899983 3335566777899999998
No 87
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=32.68 E-value=58 Score=25.17 Aligned_cols=50 Identities=12% Similarity=0.040 Sum_probs=36.8
Q ss_pred eEEecCCcCCCChHHHHHHHHHcCCcEEEEecCcccHHHHHHHHHHcCCceee
Q 025874 81 LAVLAHPWALKNPAAIIRKLKDVGLHGLEVYRSDGKLVAYTDLADTYGLLKLG 133 (247)
Q Consensus 81 vaVLAHP~~~~~~~~li~~l~~~GlDGIEv~~~~~~~~~~~~lA~~~gLl~TG 133 (247)
++|++=|-. ...++++++.+.|+.++ ++.+....+.+.+.|+++|+-+.|
T Consensus 80 lvvi~vp~~--~~~~vv~~~~~~gi~~i-~~~~g~~~~~l~~~a~~~Gi~vvG 129 (144)
T 2d59_A 80 VVDLFVKPK--LTMEYVEQAIKKGAKVV-WFQYNTYNREASKKADEAGLIIVA 129 (144)
T ss_dssp EEEECSCHH--HHHHHHHHHHHHTCSEE-EECTTCCCHHHHHHHHHTTCEEEE
T ss_pred EEEEEeCHH--HHHHHHHHHHHcCCCEE-EECCCchHHHHHHHHHHcCCEEEc
Confidence 466665531 23467888889999987 666655678888999999988766
No 88
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=31.30 E-value=39 Score=29.70 Aligned_cols=63 Identities=22% Similarity=0.278 Sum_probs=33.8
Q ss_pred HHHHHHHHHcCCeEEecCCcCCCChHHHHHHHHHcCCcEE----EEecCc--------c---cHHHHHHHHHHcCCceee
Q 025874 69 EVAVQLIHRTGGLAVLAHPWALKNPAAIIRKLKDVGLHGL----EVYRSD--------G---KLVAYTDLADTYGLLKLG 133 (247)
Q Consensus 69 ~EaI~~Ih~aGGvaVLAHP~~~~~~~~li~~l~~~GlDGI----Ev~~~~--------~---~~~~~~~lA~~~gLl~TG 133 (247)
.+.++.|++..|+.|-..|+.. ..+.++.|+++|++.+ |.+++. + +.....+.|++.|+.++.
T Consensus 129 ~~l~~~ik~~~~i~i~~s~g~~--~~e~l~~L~~aG~~~i~i~lEt~~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~ 206 (350)
T 3t7v_A 129 VELVQIVKEELGLPIMISPGLM--DNATLLKAREKGANFLALYQETYDTELYRKLRVGQSFDGRVNARRFAKQQGYCVED 206 (350)
T ss_dssp HHHHHHHHHHHCSCEEEECSSC--CHHHHHHHHHTTEEEEECCCBCSCHHHHHHHSTTCCHHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHhhcCceEEEeCCCC--CHHHHHHHHHcCCCEEEEeeecCCHHHHHHhCCCCCHHHHHHHHHHHHHcCCeEcc
Confidence 3445555543344444444321 2467788888888765 333221 1 233456777888876443
No 89
>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}
Probab=31.26 E-value=61 Score=25.23 Aligned_cols=119 Identities=13% Similarity=0.093 Sum_probs=58.8
Q ss_pred HHhhCCCCCCHHHHHHHhCCCCCCCHHHHHHHHHH-cCCCCCHHHHHHHHhhCCCC--ceeCCCCCCHHHHHHHHHHcCC
Q 025874 4 KLNKLKLPLKWEHVAKIAGKGVAPGRLHVARAMVE-AGHVENLKQAFARYLYDGGP--AYSTGSEPLAEVAVQLIHRTGG 80 (247)
Q Consensus 4 kL~~~G~~I~~eev~~~a~~~~~igRpHIA~aLv~-~G~v~~~~eaF~~yL~~g~p--ayv~~~~~~~~EaI~~Ih~aGG 80 (247)
-+++.|++++.+......+ .......+...+ .+......+...++...-.. .......+.+.++++.+++.|-
T Consensus 26 ~~~~~g~~~~~~~~~~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~ 101 (216)
T 3kbb_A 26 VAESYGKPYTEDLHRRIMG----VPEREGLPILMEALEIKDSLENFKKRVHEEKKRVFSELLKENPGVREALEFVKSKRI 101 (216)
T ss_dssp HHHHTTCCCCHHHHHHHTT----SCHHHHHHHHHHHTTCCSCHHHHHHHHHHHHHHHHHHHCCBCTTHHHHHHHHHHTTC
T ss_pred HHHHcCCCCCHHHHHHHhc----cchhhhhhhhhhcccchhhHHHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHcCC
Confidence 3567899999887766643 234455555554 33333433322221110000 0011235788899999998885
Q ss_pred eEEecCCcCCCChHHHHHHHHHcCCcE-EEE-ecCc------ccHHHHHHHHHHcCC
Q 025874 81 LAVLAHPWALKNPAAIIRKLKDVGLHG-LEV-YRSD------GKLVAYTDLADTYGL 129 (247)
Q Consensus 81 vaVLAHP~~~~~~~~li~~l~~~GlDG-IEv-~~~~------~~~~~~~~lA~~~gL 129 (247)
...++ ...........+...|++. ++. +.+. -+...+...++++|+
T Consensus 102 ~~~i~---tn~~~~~~~~~l~~~~l~~~fd~~~~~~~~~~~KP~p~~~~~a~~~lg~ 155 (216)
T 3kbb_A 102 KLALA---TSTPQREALERLRRLDLEKYFDVMVFGDQVKNGKPDPEIYLLVLERLNV 155 (216)
T ss_dssp EEEEE---CSSCHHHHHHHHHHTTCGGGCSEEECGGGSSSCTTSTHHHHHHHHHHTC
T ss_pred Ccccc---cCCcHHHHHHHHHhcCCCccccccccccccCCCcccHHHHHHHHHhhCC
Confidence 54443 1112222333344456432 111 2211 135667777777764
No 90
>3d3a_A Beta-galactosidase; protein structure initiative II, PSI II, NYSGXRC, 11092F, structural genomics; 2.15A {Bacteroides thetaiotaomicron vpi-5482}
Probab=30.98 E-value=58 Score=31.89 Aligned_cols=50 Identities=18% Similarity=0.262 Sum_probs=36.4
Q ss_pred CCcCCC--ChHHHHHHHHHcCCcEEEEe-----cCcc----------cHHHHHHHHHHcCCceeecC
Q 025874 86 HPWALK--NPAAIIRKLKDVGLHGLEVY-----RSDG----------KLVAYTDLADTYGLLKLGGS 135 (247)
Q Consensus 86 HP~~~~--~~~~li~~l~~~GlDGIEv~-----~~~~----------~~~~~~~lA~~~gLl~TGGS 135 (247)
|+.+.. ..++.++.++++|++.|.++ +-.. +...+.++|+++||.+.-.-
T Consensus 30 Hy~r~~~e~w~~dl~~mK~~G~N~Vrt~v~W~~hEP~~G~ydf~gl~~l~~fl~la~e~GL~VIl~~ 96 (612)
T 3d3a_A 30 HYPRIPKEYWEHRIKMCKALGMNTICLYVFWNFHEPEEGRYDFAGQKDIAAFCRLAQENGMYVIVRP 96 (612)
T ss_dssp CGGGSCGGGHHHHHHHHHHHTCCEEEEECCHHHHCSSTTCCCCSGGGCHHHHHHHHHHTTCEEEEEC
T ss_pred cCccCCHHHHHHHHHHHHHcCCCEEEEcChHHhcCCCCCccChhHHHHHHHHHHHHHHCCCEEEEec
Confidence 555432 23567888999999999998 4221 35788999999999876543
No 91
>1m5w_A Pyridoxal phosphate biosynthetic protein PDXJ; TIM barrel, protein-substrate complex, multi-binding states; HET: DXP; 1.96A {Escherichia coli} SCOP: c.1.24.1 PDB: 1ho1_A 1ho4_A* 1ixn_A* 1ixo_A* 1ixp_A 1ixq_A 3f4n_A*
Probab=30.21 E-value=1.7e+02 Score=25.50 Aligned_cols=68 Identities=16% Similarity=0.114 Sum_probs=49.7
Q ss_pred HHHHHHHHHcCCeEEecCCcCCCChHHHHHHHHHcCCcEEEEecCcc-------c-------HHHHHHHHHHcCCceeec
Q 025874 69 EVAVQLIHRTGGLAVLAHPWALKNPAAIIRKLKDVGLHGLEVYRSDG-------K-------LVAYTDLADTYGLLKLGG 134 (247)
Q Consensus 69 ~EaI~~Ih~aGGvaVLAHP~~~~~~~~li~~l~~~GlDGIEv~~~~~-------~-------~~~~~~lA~~~gLl~TGG 134 (247)
.++|+..+++|--+.|- --.. .+.++..++.|.|-||.|.+.+ + .....++|.++||-+-+|
T Consensus 117 ~~~i~~L~~~GIrVSLF---IDpd-~~qi~aA~~~GA~~IELhTG~Ya~a~~~~~~~~el~~i~~aa~~A~~lGL~VnAG 192 (243)
T 1m5w_A 117 RDACKRLADAGIQVSLF---IDAD-EEQIKAAAEVGAPFIEIHTGCYADAKTDAEQAQELARIAKAATFAASLGLKVNAG 192 (243)
T ss_dssp HHHHHHHHHTTCEEEEE---ECSC-HHHHHHHHHTTCSEEEEECHHHHHCCSHHHHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHCCCEEEEE---eCCC-HHHHHHHHHhCcCEEEEechhhhcCCCchhHHHHHHHHHHHHHHHHHcCCEEecC
Confidence 78999999998766552 1112 3678888899999999997531 1 134568889999999999
Q ss_pred CCCCCC
Q 025874 135 SDYHGR 140 (247)
Q Consensus 135 SDfHG~ 140 (247)
-|-+-.
T Consensus 193 HgL~y~ 198 (243)
T 1m5w_A 193 HGLTYH 198 (243)
T ss_dssp SSCCTT
T ss_pred CCCCHH
Confidence 665543
No 92
>4e8d_A Glycosyl hydrolase, family 35; TIM barrel, beta-propeller, glycohydrolase; 1.80A {Streptococcus pneumoniae} PDB: 4e8c_A
Probab=30.20 E-value=64 Score=31.66 Aligned_cols=50 Identities=20% Similarity=0.297 Sum_probs=37.2
Q ss_pred cCCcCCC--ChHHHHHHHHHcCCcEEEEecC------c---------ccHHHHHHHHHHcCCceeec
Q 025874 85 AHPWALK--NPAAIIRKLKDVGLHGLEVYRS------D---------GKLVAYTDLADTYGLLKLGG 134 (247)
Q Consensus 85 AHP~~~~--~~~~li~~l~~~GlDGIEv~~~------~---------~~~~~~~~lA~~~gLl~TGG 134 (247)
-||.+.. ..++.++.++++|++.|++|-+ . .+...+.++|+++||.+.-.
T Consensus 24 ~Hy~r~p~~~W~d~l~kmKa~G~NtV~~yv~W~~hEP~~G~fdF~g~~dL~~fl~~a~~~Gl~Vilr 90 (595)
T 4e8d_A 24 IHYFRVPPEDWYHSLYNLKALGFNTVETYVAWNLHEPCEGEFHFEGDLDLEKFLQIAQDLGLYAIVR 90 (595)
T ss_dssp ECGGGSCGGGHHHHHHHHHHTTCCEEEEECCHHHHCSBTTBCCCSGGGCHHHHHHHHHHTTCEEEEE
T ss_pred eChhhCCHHHHHHHHHHHHHcCCCEEEEeccHHHcCCCCCeecccchhhHHHHHHHHHHcCCEEEEe
Confidence 4666543 2357788999999999999632 1 14789999999999977654
No 93
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=29.94 E-value=1.7e+02 Score=26.03 Aligned_cols=102 Identities=15% Similarity=0.043 Sum_probs=62.0
Q ss_pred HHHHHHHHHHcCCCCCHHHH-HHHHhhCCC----CceeCCCCCCHHHHHHHHHHc-CCeEE--ecCCcCCCChHHHHHHH
Q 025874 29 RLHVARAMVEAGHVENLKQA-FARYLYDGG----PAYSTGSEPLAEVAVQLIHRT-GGLAV--LAHPWALKNPAAIIRKL 100 (247)
Q Consensus 29 RpHIA~aLv~~G~v~~~~ea-F~~yL~~g~----payv~~~~~~~~EaI~~Ih~a-GGvaV--LAHP~~~~~~~~li~~l 100 (247)
+..|+++|.+.|+-. -|+ | ++|- |-+.| ...+..|.++.+++. .++.+ +.-|.+ .. .+.++..
T Consensus 32 k~~i~~~L~~~Gvd~--IEvG~----~~g~p~ssp~~g~-~~~~~~e~l~~i~~~~~~~~i~~l~~p~~-~~-~~~i~~a 102 (345)
T 1nvm_A 32 VRAIARALDKAKVDS--IEVAH----GDGLQGSSFNYGF-GRHTDLEYIEAVAGEISHAQIATLLLPGI-GS-VHDLKNA 102 (345)
T ss_dssp HHHHHHHHHHHTCSE--EECSC----TTSTTCCBTTTBC-CSSCHHHHHHHHHTTCSSSEEEEEECBTT-BC-HHHHHHH
T ss_pred HHHHHHHHHHcCCCE--EEEec----CCCCCCCCCcccC-CCCCHHHHHHHHHhhCCCCEEEEEecCCc-cc-HHHHHHH
Confidence 345788888877521 111 1 1111 22223 234677888777664 34443 334542 22 4678888
Q ss_pred HHcCCcEEEEecCcc---cHHHHHHHHHHcCCceeec-CCCCC
Q 025874 101 KDVGLHGLEVYRSDG---KLVAYTDLADTYGLLKLGG-SDYHG 139 (247)
Q Consensus 101 ~~~GlDGIEv~~~~~---~~~~~~~lA~~~gLl~TGG-SDfHG 139 (247)
.++|+|++=++.+.. ......++|+++|+-+.+. +|.+.
T Consensus 103 ~~aGvd~v~I~~~~s~~~~~~~~i~~ak~~G~~v~~~~~~a~~ 145 (345)
T 1nvm_A 103 YQAGARVVRVATHCTEADVSKQHIEYARNLGMDTVGFLMMSHM 145 (345)
T ss_dssp HHHTCCEEEEEEETTCGGGGHHHHHHHHHHTCEEEEEEESTTS
T ss_pred HhCCcCEEEEEEeccHHHHHHHHHHHHHHCCCEEEEEEEeCCC
Confidence 889999999886543 4567788999999876655 67654
No 94
>3thd_A Beta-galactosidase; TIM-barrel domain, glycosyl hydrolase, glycosylation, hydrolase; HET: NAG DGJ; 1.79A {Homo sapiens} PDB: 3thc_A*
Probab=29.76 E-value=77 Score=31.49 Aligned_cols=50 Identities=22% Similarity=0.214 Sum_probs=37.5
Q ss_pred cCCcCCC--ChHHHHHHHHHcCCcEEEEecC------c---------ccHHHHHHHHHHcCCceeec
Q 025874 85 AHPWALK--NPAAIIRKLKDVGLHGLEVYRS------D---------GKLVAYTDLADTYGLLKLGG 134 (247)
Q Consensus 85 AHP~~~~--~~~~li~~l~~~GlDGIEv~~~------~---------~~~~~~~~lA~~~gLl~TGG 134 (247)
-||.+.. ..++.+..++++|++.|++|-+ . .+...+.++|+++||.+.-.
T Consensus 32 ~Hy~r~p~~~W~d~l~kmKa~G~NtV~~yv~W~~hEP~~G~fdF~g~~DL~~fl~~a~~~GL~ViLr 98 (654)
T 3thd_A 32 IHYSRVPRFYWKDRLLKMKMAGLNAIQTYVPWNFHEPWPGQYQFSEDHDVEYFLRLAHELGLLVILR 98 (654)
T ss_dssp CCGGGSCGGGHHHHHHHHHHTTCSEEEEECCHHHHCSBTTBCCCSGGGCHHHHHHHHHHTTCEEEEE
T ss_pred cccccCCHHHHHHHHHHHHHcCCCEEEEEechhhcCCCCCccCccchHHHHHHHHHHHHcCCEEEec
Confidence 4666543 2357888999999999999643 1 14689999999999987654
No 95
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=29.58 E-value=71 Score=28.56 Aligned_cols=65 Identities=22% Similarity=0.300 Sum_probs=45.3
Q ss_pred CCHHHHHHHHHHcCCeEEecC-----CcCCCChHHHHHHHHHcCCcEEEEecCc--------------c-----cHHHHH
Q 025874 66 PLAEVAVQLIHRTGGLAVLAH-----PWALKNPAAIIRKLKDVGLHGLEVYRSD--------------G-----KLVAYT 121 (247)
Q Consensus 66 ~~~~EaI~~Ih~aGGvaVLAH-----P~~~~~~~~li~~l~~~GlDGIEv~~~~--------------~-----~~~~~~ 121 (247)
+..+-+-+.+-....++|+|= |++ ....+++.++++|+.|+ .-||. + +...+.
T Consensus 80 iv~e~~~evlp~v~~iPV~Agv~~~DP~~--~~g~~Le~lk~~Gf~Gv-~N~ptvglidG~fr~~LEE~gm~~~~eve~I 156 (286)
T 2p10_A 80 IVVDMAREVLPVVRHTPVLAGVNGTDPFM--VMSTFLRELKEIGFAGV-QNFPTVGLIDGLFRQNLEETGMSYAQEVEMI 156 (286)
T ss_dssp HHHHHHHHHGGGCSSSCEEEEECTTCTTC--CHHHHHHHHHHHTCCEE-EECSCGGGCCHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHhhhccCCCCCEEEEECCcCCCc--CHHHHHHHHHHhCCceE-EECCCcccccchhhhhHhhcCCCHHHHHHHH
Confidence 334444456666667888874 332 45678899999999999 88882 1 245677
Q ss_pred HHHHHcCCceee
Q 025874 122 DLADTYGLLKLG 133 (247)
Q Consensus 122 ~lA~~~gLl~TG 133 (247)
+.|++.||+.+.
T Consensus 157 ~~A~~~gL~Ti~ 168 (286)
T 2p10_A 157 AEAHKLDLLTTP 168 (286)
T ss_dssp HHHHHTTCEECC
T ss_pred HHHHHCCCeEEE
Confidence 899999997654
No 96
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=28.38 E-value=96 Score=26.21 Aligned_cols=69 Identities=12% Similarity=0.112 Sum_probs=46.3
Q ss_pred eeCCCCCCHHHHHHHHHHcCCeEEecCCcCCCChHHHHHHHHHcCCcEEEEecCc--ccHHHHHHHHHHcCCc
Q 025874 60 YSTGSEPLAEVAVQLIHRTGGLAVLAHPWALKNPAAIIRKLKDVGLHGLEVYRSD--GKLVAYTDLADTYGLL 130 (247)
Q Consensus 60 yv~~~~~~~~EaI~~Ih~aGGvaVLAHP~~~~~~~~li~~l~~~GlDGIEv~~~~--~~~~~~~~lA~~~gLl 130 (247)
|||--...+ ++|+.|++.-...+.+|=.-. +++..++.+.++|.|+|=+..-. .+...+.+.++++|..
T Consensus 38 fvpn~t~G~-~~v~~lr~~~~~~~dvhLmv~-dp~~~i~~~~~aGAd~itvh~Ea~~~~~~~~i~~i~~~G~k 108 (231)
T 3ctl_A 38 FVPNLTLSP-FFVSQVKKLATKPLDCHLMVT-RPQDYIAQLARAGADFITLHPETINGQAFRLIDEIRRHDMK 108 (231)
T ss_dssp SSSCCCBCH-HHHHHHHTTCCSCEEEEEESS-CGGGTHHHHHHHTCSEEEECGGGCTTTHHHHHHHHHHTTCE
T ss_pred cCccchhcH-HHHHHHHhccCCcEEEEEEec-CHHHHHHHHHHcCCCEEEECcccCCccHHHHHHHHHHcCCe
Confidence 556433334 477888876567788886543 45566788888999998665422 2456778888888864
No 97
>2vc7_A Aryldialkylphosphatase; phosphotriesterase, promiscuous activities, enzyme evolution, hyperthermophilic, lactonase, hydrolase; HET: KCX GOL HT5; 2.05A {Sulfolobus solfataricus} PDB: 2vc5_A*
Probab=28.35 E-value=62 Score=27.42 Aligned_cols=49 Identities=16% Similarity=0.194 Sum_probs=30.4
Q ss_pred CCCceeCCC--CCCHHHHHHHHHHcCC---eEEecCCcCCCChHHHHHHHHHcCC
Q 025874 56 GGPAYSTGS--EPLAEVAVQLIHRTGG---LAVLAHPWALKNPAAIIRKLKDVGL 105 (247)
Q Consensus 56 g~payv~~~--~~~~~EaI~~Ih~aGG---vaVLAHP~~~~~~~~li~~l~~~Gl 105 (247)
|.|-.+-.. .....++++++++.|- -.+++|++..... +.+.++++.|+
T Consensus 164 ~~pv~iH~~~~~~~~~~~~~~l~~~~~~~~~~~i~H~~~~~~~-~~~~~~~~~G~ 217 (314)
T 2vc7_A 164 KVPIITHSNAHNNTGLEQQRILTEEGVDPGKILIGHLGDTDNI-DYIKKIADKGS 217 (314)
T ss_dssp CCCEEEECCTTTTHHHHHHHHHHHTTCCGGGEEETTGGGCCCH-HHHHHHHHTTC
T ss_pred CCEEEEeCCCcccChHHHHHHHHHcCCCcccEEEECCCCCCCH-HHHHHHHHcCC
Confidence 666544332 1445688888888763 2378998763333 55667777763
No 98
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=27.99 E-value=2.2e+02 Score=24.17 Aligned_cols=20 Identities=15% Similarity=0.041 Sum_probs=15.8
Q ss_pred HHHHHHHHcCCcEEEEecCc
Q 025874 95 AIIRKLKDVGLHGLEVYRSD 114 (247)
Q Consensus 95 ~li~~l~~~GlDGIEv~~~~ 114 (247)
++++.|.+.|.|+||+=.|.
T Consensus 35 ~~~~~l~~~G~D~IElG~P~ 54 (262)
T 2ekc_A 35 KAFKEVLKNGTDILEIGFPF 54 (262)
T ss_dssp HHHHHHHHTTCSEEEEECCC
T ss_pred HHHHHHHHcCCCEEEECCCC
Confidence 56777888999999996653
No 99
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=27.90 E-value=2.9e+02 Score=24.37 Aligned_cols=97 Identities=18% Similarity=0.235 Sum_probs=59.7
Q ss_pred CCCCCHHHHHH---HHhhCCCCceeCCC-CCCHHHHHHHHHHcCCeEEecCCcCCC-------------C---hHHHHHH
Q 025874 40 GHVENLKQAFA---RYLYDGGPAYSTGS-EPLAEVAVQLIHRTGGLAVLAHPWALK-------------N---PAAIIRK 99 (247)
Q Consensus 40 G~v~~~~eaF~---~yL~~g~payv~~~-~~~~~EaI~~Ih~aGGvaVLAHP~~~~-------------~---~~~li~~ 99 (247)
+|..|..++++ +.+.+.+-.=|.-+ .-...+.|+.+.++| ++|.+|=+... . .++++++
T Consensus 106 sy~~s~~~a~~na~rl~~eaGa~aVklEdg~e~~~~I~al~~ag-IpV~gHiGLtPqsv~~~ggf~v~grt~~a~~~i~r 184 (281)
T 1oy0_A 106 SYEAGPTAALAAATRFLKDGGAHAVKLEGGERVAEQIACLTAAG-IPVMAHIGFTPQSVNTLGGFRVQGRGDAAEQTIAD 184 (281)
T ss_dssp SSTTCHHHHHHHHHHHHHTTCCSEEEEEBSGGGHHHHHHHHHHT-CCEEEEEECCC--------------CHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHhCCeEEEECCcHHHHHHHHHHHHCC-CCEEeeecCCcceecccCCeEEEeCcHHHHHHHHH
Confidence 34457777654 56653333323221 234678899998875 99998854221 0 1234443
Q ss_pred ---HHHcCCcEEEEecCcccHHHHHHHHHHcCCceee---cCCCCC
Q 025874 100 ---LKDVGLHGLEVYRSDGKLVAYTDLADTYGLLKLG---GSDYHG 139 (247)
Q Consensus 100 ---l~~~GlDGIEv~~~~~~~~~~~~lA~~~gLl~TG---GSDfHG 139 (247)
+.++|.|+|-+-... ...+.+++++..++..| |.++-|
T Consensus 185 A~a~~eAGA~~ivlE~vp--~~~a~~it~~l~iP~igIGaG~~~dg 228 (281)
T 1oy0_A 185 AIAVAEAGAFAVVMEMVP--AELATQITGKLTIPTVGIGAGPNCDG 228 (281)
T ss_dssp HHHHHHHTCSEEEEESCC--HHHHHHHHHHCSSCEEEESSCSCSSE
T ss_pred HHHHHHcCCcEEEEecCC--HHHHHHHHHhCCCCEEEeCCCCCCCc
Confidence 446899998665543 35677899999987765 667766
No 100
>2f6k_A Metal-dependent hydrolase; metal dependent hydrolyse, aminohydro_2, ACMDS, ACMS, trypto metabolism, quinolinic acid, QUIN; 2.50A {Lactobacillus plantarum} SCOP: c.1.9.15
Probab=27.40 E-value=1.3e+02 Score=24.98 Aligned_cols=63 Identities=13% Similarity=0.071 Sum_probs=38.2
Q ss_pred HHHHHHHHcCC--eEEecCCcCC-CChHHHHHHHH-HcCCcEEEEecCc-----c--cHHHHHHHHHHcCCcee
Q 025874 70 VAVQLIHRTGG--LAVLAHPWAL-KNPAAIIRKLK-DVGLHGLEVYRSD-----G--KLVAYTDLADTYGLLKL 132 (247)
Q Consensus 70 EaI~~Ih~aGG--vaVLAHP~~~-~~~~~li~~l~-~~GlDGIEv~~~~-----~--~~~~~~~lA~~~gLl~T 132 (247)
.+.+++....+ .++..||... ....+.+++++ ..|+.|||+.... . .-....++|+++|+.+.
T Consensus 79 ~~~~~~~~~p~r~~~~~~~p~~~~~~~~~el~~~~~~~g~~gi~~~~~~~~~~~~~~~~~~~~~~a~~~~lpv~ 152 (307)
T 2f6k_A 79 DGKSLAQQYPDQLGYLASLPIPYELDAVKTVQQALDQDGALGVTVPTNSRGLYFGSPVLERVYQELDARQAIVA 152 (307)
T ss_dssp HHHHHHHHCTTTEEEEECCCTTCHHHHHHHHHHHHHTSCCSEEEEESEETTEETTCGGGHHHHHHHHTTTCEEE
T ss_pred HHHHHHHhCccceeEEEeCCCCCHHHHHHHHHHHHhccCCcEEEEeccCCCCCCCcHhHHHHHHHHHHcCCeEE
Confidence 35556665544 3555677321 11123455555 4699999886432 1 23677889999999885
No 101
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=27.23 E-value=3e+02 Score=23.73 Aligned_cols=67 Identities=12% Similarity=0.063 Sum_probs=41.6
Q ss_pred CCCHHHHHHHHH---H--cCCeEEecCCcCCCC--hHHHHHHHHHcCCcEEEEecCcc----c---HHHHHHHHHHcCCc
Q 025874 65 EPLAEVAVQLIH---R--TGGLAVLAHPWALKN--PAAIIRKLKDVGLHGLEVYRSDG----K---LVAYTDLADTYGLL 130 (247)
Q Consensus 65 ~~~~~EaI~~Ih---~--aGGvaVLAHP~~~~~--~~~li~~l~~~GlDGIEv~~~~~----~---~~~~~~lA~~~gLl 130 (247)
.++.+|=.++++ + .|.++|+||=+...- ..++.+...+.|.||+=+..|++ + .+++.++|+.-++.
T Consensus 56 ~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~lP 135 (297)
T 3flu_A 56 TLSVEEHTAVIEAVVKHVAKRVPVIAGTGANNTVEAIALSQAAEKAGADYTLSVVPYYNKPSQEGIYQHFKTIAEATSIP 135 (297)
T ss_dssp GSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCCSC
T ss_pred cCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCC
Confidence 356665444442 2 366889988654321 12455566678999998877653 1 35777888876665
Q ss_pred e
Q 025874 131 K 131 (247)
Q Consensus 131 ~ 131 (247)
+
T Consensus 136 i 136 (297)
T 3flu_A 136 M 136 (297)
T ss_dssp E
T ss_pred E
Confidence 4
No 102
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=27.12 E-value=1.8e+02 Score=23.10 Aligned_cols=67 Identities=10% Similarity=-0.009 Sum_probs=39.2
Q ss_pred HHHHHHHHcC-CeEEecCCcCCCChHHHHHHHHHcCCcEEEEecCc--ccHHHHHHHHHHcCCceeecCCCC
Q 025874 70 VAVQLIHRTG-GLAVLAHPWALKNPAAIIRKLKDVGLHGLEVYRSD--GKLVAYTDLADTYGLLKLGGSDYH 138 (247)
Q Consensus 70 EaI~~Ih~aG-GvaVLAHP~~~~~~~~li~~l~~~GlDGIEv~~~~--~~~~~~~~lA~~~gLl~TGGSDfH 138 (247)
+.|+.+++.- ++.+..|=..++-+...++.+.+.|.|||=+.-.. .....+.+.++++|+.+ |-+.|
T Consensus 42 ~~i~~l~~~~~~~~i~~~l~~~di~~~~~~~a~~~Gad~v~vh~~~~~~~~~~~~~~~~~~g~~~--gv~~~ 111 (207)
T 3ajx_A 42 SVITAVKKAHPDKIVFADMKTMDAGELEADIAFKAGADLVTVLGSADDSTIAGAVKAAQAHNKGV--VVDLI 111 (207)
T ss_dssp HHHHHHHHHSTTSEEEEEEEECSCHHHHHHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHHTCEE--EEECT
T ss_pred HHHHHHHHhCCCCeEEEEEEecCccHHHHHHHHhCCCCEEEEeccCChHHHHHHHHHHHHcCCce--EEEEe
Confidence 3566666653 66777765543213445677777888887654322 23456667777777654 33444
No 103
>3i5g_C Myosin catalytic light chain LC-1, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_C 3i5h_C 3i5i_C
Probab=26.52 E-value=2.1e+02 Score=21.71 Aligned_cols=70 Identities=14% Similarity=0.081 Sum_probs=43.2
Q ss_pred HHhhCCCCCCHHHHHHHhC----CCCCCCHHHHHHHHHHcC---CCCC---HHHHHHHHhhCCCCceeCCCCCCHHHHHH
Q 025874 4 KLNKLKLPLKWEHVAKIAG----KGVAPGRLHVARAMVEAG---HVEN---LKQAFARYLYDGGPAYSTGSEPLAEVAVQ 73 (247)
Q Consensus 4 kL~~~G~~I~~eev~~~a~----~~~~igRpHIA~aLv~~G---~v~~---~~eaF~~yL~~g~payv~~~~~~~~EaI~ 73 (247)
-|+.+|+..+.+++.+... +...+.-..+...+.... ...+ +.+||+.| ...+..|+ +.+|...
T Consensus 36 ~lr~lG~~~t~~el~~~~~~d~~~~g~i~f~eFl~~~~~~~~~~~~~~~~~l~~aF~~f-D~d~~G~I-----~~~el~~ 109 (159)
T 3i5g_C 36 LLRCLGMNPTEAQVHQHGGTKKMGEKAYKLEEILPIYEEMSSKDTGTAADEFMEAFKTF-DREGQGLI-----SSAEIRN 109 (159)
T ss_dssp HHHHTTCCCCHHHHHTTTCCSSTTSCEECHHHHHHHHHHHTTCCTTCCHHHHHHHHHHH-CTTSSSEE-----CHHHHHH
T ss_pred HHHHcCCCCCHHHHHHHHcccccCCCcccHHHHHHHHHHhhcccccchHHHHHHHHHHH-hcCCCCcC-----cHHHHHH
Confidence 4678899999999876542 122355566666554321 1222 56788555 45555555 6788877
Q ss_pred HHHHcC
Q 025874 74 LIHRTG 79 (247)
Q Consensus 74 ~Ih~aG 79 (247)
+++..|
T Consensus 110 ~l~~~g 115 (159)
T 3i5g_C 110 VLKMLG 115 (159)
T ss_dssp HHHHSS
T ss_pred HHHHhC
Confidence 777765
No 104
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=26.46 E-value=1.1e+02 Score=26.45 Aligned_cols=58 Identities=16% Similarity=0.082 Sum_probs=41.1
Q ss_pred HHHHHHhhCCCCceeCCCC-CCHHHHHHH------HHHcCCeEEecCCcCCCChHHHHHHHHHcC
Q 025874 47 QAFARYLYDGGPAYSTGSE-PLAEVAVQL------IHRTGGLAVLAHPWALKNPAAIIRKLKDVG 104 (247)
Q Consensus 47 eaF~~yL~~g~payv~~~~-~~~~EaI~~------Ih~aGGvaVLAHP~~~~~~~~li~~l~~~G 104 (247)
+.-..-|..|+.-++.++. .+++|+-++ .++.|-+...+|..++.-....++++++.|
T Consensus 90 ~~~~~al~aGkhVl~EKPla~t~~ea~~l~~~~~~~~~~g~~~~v~~~~R~~p~~~~~k~~i~~g 154 (390)
T 4h3v_A 90 EIAIAALEAGKHVLCEKPLANTVAEAEAMAAAAAKAAAGGIRSMVGFTYRRVPAIALARKLVADG 154 (390)
T ss_dssp HHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHHHHTTCCEEEECGGGGSHHHHHHHHHHHTT
T ss_pred HHHHHHHHcCCCceeecCcccchhHHHHHHHHHHHHHhcCCceEEEeeeccCchHHHHHHHHHcC
Confidence 3344567788888998764 788888555 444788888999988764345567777766
No 105
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=26.27 E-value=1e+02 Score=26.70 Aligned_cols=74 Identities=19% Similarity=0.174 Sum_probs=51.5
Q ss_pred HHHHHHHHhhCCCCceeCCCCCCHHHHHHHHHHcCC-eEEecCCcCCCC------hHHHHHHHHHcCCcEEEEec-Cccc
Q 025874 45 LKQAFARYLYDGGPAYSTGSEPLAEVAVQLIHRTGG-LAVLAHPWALKN------PAAIIRKLKDVGLHGLEVYR-SDGK 116 (247)
Q Consensus 45 ~~eaF~~yL~~g~payv~~~~~~~~EaI~~Ih~aGG-vaVLAHP~~~~~------~~~li~~l~~~GlDGIEv~~-~~~~ 116 (247)
+|+|-.+=|..| .+++++.+++++.-. ++++- +.|.| .+..+++++++|+||+=+-. |..+
T Consensus 61 Iq~a~~rAL~~g---------~~~~~~~~~~~~~r~~~Pivl--m~Y~N~i~~~G~e~F~~~~~~aGvdG~IipDLP~eE 129 (252)
T 3tha_A 61 IADAAKIALDQG---------VDIHSVFELLARIKTKKALVF--MVYYNLIFSYGLEKFVKKAKSLGICALIVPELSFEE 129 (252)
T ss_dssp HHHHHHHHHHTT---------CCHHHHHHHHHHCCCSSEEEE--ECCHHHHHHHCHHHHHHHHHHTTEEEEECTTCCGGG
T ss_pred HHHHHHHHHHCC---------CCHHHHHHHHHHHhcCCCEEE--EeccCHHHHhhHHHHHHHHHHcCCCEEEeCCCCHHH
Confidence 577777778766 377888888887653 22221 12332 45788889999999976554 3456
Q ss_pred HHHHHHHHHHcCC
Q 025874 117 LVAYTDLADTYGL 129 (247)
Q Consensus 117 ~~~~~~lA~~~gL 129 (247)
...+.+.|++|||
T Consensus 130 ~~~~~~~~~~~Gl 142 (252)
T 3tha_A 130 SDDLIKECERYNI 142 (252)
T ss_dssp CHHHHHHHHHTTC
T ss_pred HHHHHHHHHHcCC
Confidence 7888999999997
No 106
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=25.90 E-value=68 Score=24.51 Aligned_cols=91 Identities=10% Similarity=0.019 Sum_probs=55.7
Q ss_pred HHHHHHHHcCCCCCH--HHHHHHHhhCCCCceeCCCCCCHHHHHHHHHHcCCeEEecCCcCCCChHHHHHHHHHcCCcEE
Q 025874 31 HVARAMVEAGHVENL--KQAFARYLYDGGPAYSTGSEPLAEVAVQLIHRTGGLAVLAHPWALKNPAAIIRKLKDVGLHGL 108 (247)
Q Consensus 31 HIA~aLv~~G~v~~~--~eaF~~yL~~g~payv~~~~~~~~EaI~~Ih~aGGvaVLAHP~~~~~~~~li~~l~~~GlDGI 108 (247)
.+++.|.+.|| +-. ..-.+.. .|.++|-.-..++ + +| +++++=|-. ...++++++.+.|..+|
T Consensus 22 ~v~~~L~~~g~-~V~pVnP~~~~i--~G~~~y~sl~dlp--~-vD-------lavi~~p~~--~v~~~v~e~~~~g~k~v 86 (122)
T 3ff4_A 22 LAAERLKSHGH-EFIPVGRKKGEV--LGKTIINERPVIE--G-VD-------TVTLYINPQ--NQLSEYNYILSLKPKRV 86 (122)
T ss_dssp HHHHHHHHHTC-CEEEESSSCSEE--TTEECBCSCCCCT--T-CC-------EEEECSCHH--HHGGGHHHHHHHCCSEE
T ss_pred HHHHHHHHCCC-eEEEECCCCCcC--CCeeccCChHHCC--C-CC-------EEEEEeCHH--HHHHHHHHHHhcCCCEE
Confidence 58889999887 100 0001111 2445664333222 3 43 677776642 12357888889999985
Q ss_pred EEecCcccHHHHHHHHHHcCCceeecCCCCC
Q 025874 109 EVYRSDGKLVAYTDLADTYGLLKLGGSDYHG 139 (247)
Q Consensus 109 Ev~~~~~~~~~~~~lA~~~gLl~TGGSDfHG 139 (247)
++.+...++.+.++|+++|+-+. | .+-|
T Consensus 87 -~~~~G~~~~e~~~~a~~~Girvv-~-nC~g 114 (122)
T 3ff4_A 87 -IFNPGTENEELEEILSENGIEPV-I-GCTL 114 (122)
T ss_dssp -EECTTCCCHHHHHHHHHTTCEEE-E-SCHH
T ss_pred -EECCCCChHHHHHHHHHcCCeEE-C-CcCe
Confidence 56665667889999999999877 4 5543
No 107
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=25.71 E-value=3.2e+02 Score=23.91 Aligned_cols=67 Identities=18% Similarity=0.192 Sum_probs=41.0
Q ss_pred CCCHHHHHHHHHH-----cCCeEEecCCcCCCC--hHHHHHHHHHcCCcEEEEecCcc----c---HHHHHHHHHHcCCc
Q 025874 65 EPLAEVAVQLIHR-----TGGLAVLAHPWALKN--PAAIIRKLKDVGLHGLEVYRSDG----K---LVAYTDLADTYGLL 130 (247)
Q Consensus 65 ~~~~~EaI~~Ih~-----aGGvaVLAHP~~~~~--~~~li~~l~~~GlDGIEv~~~~~----~---~~~~~~lA~~~gLl 130 (247)
.++.+|=.++++. .|.++|+|+=+...- ..++.+...+.|.||+=+..|++ + .+++.++|+.-++.
T Consensus 72 ~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lP 151 (314)
T 3qze_A 72 TLDVEEHIQVIRRVVDQVKGRIPVIAGTGANSTREAVALTEAAKSGGADACLLVTPYYNKPTQEGMYQHFRHIAEAVAIP 151 (314)
T ss_dssp GCCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHSCSC
T ss_pred hCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCC
Confidence 4666664444432 356788887654321 12445566678999988877643 1 35777888876665
Q ss_pred e
Q 025874 131 K 131 (247)
Q Consensus 131 ~ 131 (247)
+
T Consensus 152 i 152 (314)
T 3qze_A 152 Q 152 (314)
T ss_dssp E
T ss_pred E
Confidence 4
No 108
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=25.34 E-value=3.3e+02 Score=23.87 Aligned_cols=88 Identities=9% Similarity=0.138 Sum_probs=52.1
Q ss_pred CCCHHHHHHHHH---H--cCCeEEecCCcCCCC--hHHHHHHHHHcCCcEEEEecCcc----c---HHHHHHHHHHcCCc
Q 025874 65 EPLAEVAVQLIH---R--TGGLAVLAHPWALKN--PAAIIRKLKDVGLHGLEVYRSDG----K---LVAYTDLADTYGLL 130 (247)
Q Consensus 65 ~~~~~EaI~~Ih---~--aGGvaVLAHP~~~~~--~~~li~~l~~~GlDGIEv~~~~~----~---~~~~~~lA~~~gLl 130 (247)
.++.+|=.++++ + .|.++|+|+=+...- ..++.+...+.|.||+=+..|++ + .++|.++|+.-++.
T Consensus 73 ~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lP 152 (315)
T 3na8_A 73 YLSDPEWDEVVDFTLKTVAHRVPTIVSVSDLTTAKTVRRAQFAESLGAEAVMVLPISYWKLNEAEVFQHYRAVGEAIGVP 152 (315)
T ss_dssp GSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEECCCCSSCCCHHHHHHHHHHHHHHCSSC
T ss_pred hCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCc
Confidence 467776444442 2 466889998654321 22455566678999999887653 1 36778888876665
Q ss_pred eeecCCCCCCCCCCCccccCccCCHHHHHHH
Q 025874 131 KLGGSDYHGRGGHGESELGSVKLPVLVLNDF 161 (247)
Q Consensus 131 ~TGGSDfHG~~~~~~~~lG~~~ip~~~l~~i 161 (247)
+.- |+-|. .-.+.++.+.+.++
T Consensus 153 iil---Yn~P~------~tg~~l~~~~~~~L 174 (315)
T 3na8_A 153 VML---YNNPG------TSGIDMSVELILRI 174 (315)
T ss_dssp EEE---EECHH------HHSCCCCHHHHHHH
T ss_pred EEE---EeCcc------hhCcCCCHHHHHHH
Confidence 531 33221 11234566777776
No 109
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=24.62 E-value=1.9e+02 Score=23.54 Aligned_cols=58 Identities=16% Similarity=0.130 Sum_probs=36.4
Q ss_pred HHHHHHHHc-CCeEEe--cCCcCCCChHHHHHHHHHcCCcEEEEecCcc--cHHHHHHHHHHcCC
Q 025874 70 VAVQLIHRT-GGLAVL--AHPWALKNPAAIIRKLKDVGLHGLEVYRSDG--KLVAYTDLADTYGL 129 (247)
Q Consensus 70 EaI~~Ih~a-GGvaVL--AHP~~~~~~~~li~~l~~~GlDGIEv~~~~~--~~~~~~~lA~~~gL 129 (247)
+.|+.+++. .+..+. -|.. ..+...++.+.++|.|+|=+..... ....+.+.++++|+
T Consensus 48 ~~i~~lr~~~~~~~i~ld~~l~--d~p~~~~~~~~~aGad~i~vh~~~~~~~~~~~~~~~~~~g~ 110 (218)
T 3jr2_A 48 KAVSTLRHNHPNHILVCDMKTT--DGGAILSRMAFEAGADWITVSAAAHIATIAACKKVADELNG 110 (218)
T ss_dssp HHHHHHHHHCTTSEEEEEEEEC--SCHHHHHHHHHHHTCSEEEEETTSCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHhCCCCcEEEEEeec--ccHHHHHHHHHhcCCCEEEEecCCCHHHHHHHHHHHHHhCC
Confidence 567777776 454443 3433 2334566778888888887765433 24667777888776
No 110
>3og2_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family 35, glycoprot hydrolase; HET: NAG BMA MAN GLC; 1.20A {Trichoderma reesei} PDB: 3ogr_A* 3ogs_A* 3ogv_A*
Probab=24.61 E-value=71 Score=33.34 Aligned_cols=51 Identities=22% Similarity=0.364 Sum_probs=38.7
Q ss_pred ecCCcCCC---ChHHHHHHHHHcCCcEEEEecC------c---------ccHHHHHHHHHHcCCceeec
Q 025874 84 LAHPWALK---NPAAIIRKLKDVGLHGLEVYRS------D---------GKLVAYTDLADTYGLLKLGG 134 (247)
Q Consensus 84 LAHP~~~~---~~~~li~~l~~~GlDGIEv~~~------~---------~~~~~~~~lA~~~gLl~TGG 134 (247)
--||++.. ..++.++.++++|++.|++|-+ . .+..++.++|+++||.+.-.
T Consensus 46 eiHy~R~p~pe~W~d~l~kmKa~GlNtV~tYV~Wn~hEP~eG~fdFsg~~dL~~fl~la~e~GL~VILR 114 (1003)
T 3og2_A 46 EVHPFRLPVPSLYLDVFHKIKALGFNTVSFYVDWALLEGKPGRFRADGIFSLEPFFEAATKAGIYLLAR 114 (1003)
T ss_dssp EECGGGCCCGGGHHHHHHHHHTTTCCEEEEECCHHHHCSBTTBCCCCGGGCSHHHHHHHHHHTCEEEEE
T ss_pred EECCccCCCHHHHHHHHHHHHHcCCCEEEEecchhhcCCCCCEecccchhhHHHHHHHHHHcCCEEEec
Confidence 35888763 2457889999999999999843 1 13589999999999977553
No 111
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=24.02 E-value=3.2e+02 Score=23.50 Aligned_cols=68 Identities=18% Similarity=0.192 Sum_probs=41.6
Q ss_pred CCCHHHHHHHHH---H--cCCeEEecCCcCCCC--hHHHHHHHHHcCCcEEEEecCcc----c---HHHHHHHHHHcCCc
Q 025874 65 EPLAEVAVQLIH---R--TGGLAVLAHPWALKN--PAAIIRKLKDVGLHGLEVYRSDG----K---LVAYTDLADTYGLL 130 (247)
Q Consensus 65 ~~~~~EaI~~Ih---~--aGGvaVLAHP~~~~~--~~~li~~l~~~GlDGIEv~~~~~----~---~~~~~~lA~~~gLl 130 (247)
.++.+|=.++++ + .|.++|+||=+...- ..++.+...+.|.||+=+..|++ + .+++.++|+.-++.
T Consensus 50 ~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~~lP 129 (291)
T 3tak_A 50 TLSMEEHTQVIKEIIRVANKRIPIIAGTGANSTREAIELTKAAKDLGADAALLVTPYYNKPTQEGLYQHYKAIAEAVELP 129 (291)
T ss_dssp GSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCCSC
T ss_pred cCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCC
Confidence 356665444443 2 366888888654321 12445566678999998877653 1 36777888876665
Q ss_pred ee
Q 025874 131 KL 132 (247)
Q Consensus 131 ~T 132 (247)
+.
T Consensus 130 ii 131 (291)
T 3tak_A 130 LI 131 (291)
T ss_dssp EE
T ss_pred EE
Confidence 53
No 112
>2oog_A Glycerophosphoryl diester phosphodiesterase; phosphatase, ST genomics, protein structure initiative, PSI; 2.20A {Staphylococcus aureus subsp} PDB: 2p76_A
Probab=24.00 E-value=81 Score=27.00 Aligned_cols=41 Identities=22% Similarity=0.417 Sum_probs=28.1
Q ss_pred HHHHHHHHHcCCeEEecCCcCCCChHHHHHHHHHcCCcEEEEecC
Q 025874 69 EVAVQLIHRTGGLAVLAHPWALKNPAAIIRKLKDVGLHGLEVYRS 113 (247)
Q Consensus 69 ~EaI~~Ih~aGGvaVLAHP~~~~~~~~li~~l~~~GlDGIEv~~~ 113 (247)
.+.|+.+|++| +.| ++|..++ ...+..+...|+|||=.-+|
T Consensus 231 ~~~v~~~~~~G-~~v--~~wTvn~-~~~~~~l~~~GVdgIiTD~P 271 (287)
T 2oog_A 231 EQNTHHLKDLG-FIV--HPYTVNE-KADMLRLNKYGVDGVFTNFA 271 (287)
T ss_dssp HHHHHHHHHTT-CEE--CCBCCCS-HHHHHHHHHHTCSEEEESCH
T ss_pred HHHHHHHHHCC-CeE--EEEeCCC-HHHHHHHHHcCCCEEEeCCH
Confidence 46778888876 555 4555554 45677888999999865554
No 113
>3gk0_A PNP synthase, pyridoxine 5'-phosphate synthase; decode, ssgcid, niaid, SBRI, cytoplasm, pyridoxine biosynthesis, transferase; HET: DXP; 2.28A {Burkholderia pseudomallei}
Probab=23.51 E-value=2.4e+02 Score=25.06 Aligned_cols=69 Identities=19% Similarity=0.163 Sum_probs=48.9
Q ss_pred HHHHHHHHHHcCCeEEecCCcCCCChHHHHHHHHHcCCcEEEEecCcc--------------cHHHHHHHHHHcCCceee
Q 025874 68 AEVAVQLIHRTGGLAVLAHPWALKNPAAIIRKLKDVGLHGLEVYRSDG--------------KLVAYTDLADTYGLLKLG 133 (247)
Q Consensus 68 ~~EaI~~Ih~aGGvaVLAHP~~~~~~~~li~~l~~~GlDGIEv~~~~~--------------~~~~~~~lA~~~gLl~TG 133 (247)
+.++|+..+++|-.+.|- --.+ .+.++..++.|.|-||.|.+.+ ......++|.++||-+-+
T Consensus 144 L~~~i~~L~~~GIrVSLF---IDpd-~~qI~aA~~~GAd~IELhTG~YA~a~~~~~~~~el~rl~~aA~~A~~lGL~VnA 219 (278)
T 3gk0_A 144 VRAACKQLADAGVRVSLF---IDPD-EAQIRAAHETGAPVIELHTGRYADAHDAAEQQREFERIATGVDAGIALGLKVNA 219 (278)
T ss_dssp HHHHHHHHHHTTCEEEEE---ECSC-HHHHHHHHHHTCSEEEECCHHHHTCSSHHHHHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHCCCEEEEE---eCCC-HHHHHHHHHhCcCEEEEecchhhccCCchhHHHHHHHHHHHHHHHHHcCCEEec
Confidence 678999999988655442 1112 3678888899999999987521 113446788999999999
Q ss_pred cCCCCCC
Q 025874 134 GSDYHGR 140 (247)
Q Consensus 134 GSDfHG~ 140 (247)
|-|-+-.
T Consensus 220 GHGL~y~ 226 (278)
T 3gk0_A 220 GHGLHYT 226 (278)
T ss_dssp CTTCCTT
T ss_pred CCCCCHH
Confidence 9665543
No 114
>3gna_A RAG-1, V(D)J recombination-activating protein 1; DNA recombination, DNA-binding, endonucle hydrolase; 2.40A {Mus musculus} PDB: 3gnb_A
Probab=23.46 E-value=32 Score=25.34 Aligned_cols=27 Identities=48% Similarity=0.747 Sum_probs=23.0
Q ss_pred Cchhhhhhhhhccc-----ChhhhhhhHHHHH
Q 025874 209 CGKGLVDECLSLWL-----TNEERQSAEFEAI 235 (247)
Q Consensus 209 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 235 (247)
-|.|+-..||..+| .||-++..|+||+
T Consensus 55 egGDvksvCltLfLlalRa~NeHrqAdELeA~ 86 (96)
T 3gna_A 55 EGGDVKAVCLTLFLLALRARNEHRQADELEAI 86 (96)
T ss_dssp STTCHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred hCCcHHHHHHHHHHHHHHccccccchHHHHHH
Confidence 46788999998876 6889999999986
No 115
>3l12_A Putative glycerophosphoryl diester phosphodiester; struct genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.60A {Silicibacter pomeroyi}
Probab=23.43 E-value=1.1e+02 Score=26.46 Aligned_cols=53 Identities=25% Similarity=0.365 Sum_probs=36.0
Q ss_pred HHHHHHHHHcCCeEEecCCcCCCChHHHHHHHHHcCCcEEEEecCcccHHHHHHHHHHcCC
Q 025874 69 EVAVQLIHRTGGLAVLAHPWALKNPAAIIRKLKDVGLHGLEVYRSDGKLVAYTDLADTYGL 129 (247)
Q Consensus 69 ~EaI~~Ih~aGGvaVLAHP~~~~~~~~li~~l~~~GlDGIEv~~~~~~~~~~~~lA~~~gL 129 (247)
.+.|+.+|++| +.|. +|..++ ...++.+.+.|+|||=.-+ ...+.++-++.||
T Consensus 258 ~~~v~~~~~~G-l~V~--~WTVn~-~~~~~~l~~~GVDgIiTD~----P~~~~~~l~~~g~ 310 (313)
T 3l12_A 258 PELVAEAHDLG-LIVL--TWTVNE-PEDIRRMATTGVDGIVTDY----PGRTQRILIDMGL 310 (313)
T ss_dssp HHHHHHHHHTT-CEEE--EBCCCS-HHHHHHHHHHTCSEEEESC----HHHHHHHHHHTTC
T ss_pred HHHHHHHHHCC-CEEE--EEcCCC-HHHHHHHHHcCCCEEEeCC----HHHHHHHHHhcCc
Confidence 56788888774 6563 455444 4677888999999986544 3456666667776
No 116
>1uas_A Alpha-galactosidase; TIM-barrel, beta-alpha-barrel, greek KEY motif, hydrolase; HET: GLA; 1.50A {Oryza sativa} SCOP: b.71.1.1 c.1.8.1
Probab=23.27 E-value=1.7e+02 Score=26.01 Aligned_cols=49 Identities=14% Similarity=0.181 Sum_probs=35.4
Q ss_pred CCCC-HHHHHHHHHHcCCeEEe-----------cCCcCCCChHHHHHHHHHcCCcEEEEec
Q 025874 64 SEPL-AEVAVQLIHRTGGLAVL-----------AHPWALKNPAAIIRKLKDVGLHGLEVYR 112 (247)
Q Consensus 64 ~~~~-~~EaI~~Ih~aGGvaVL-----------AHP~~~~~~~~li~~l~~~GlDGIEv~~ 112 (247)
.+|+ +++.++.||+.|=...+ .||+.+...+...+.+.+.|+|+|=+-+
T Consensus 71 ~FP~Gl~~l~~~ih~~Glk~Giw~~~~~~~~~~~~pg~~~~~~~~~~~~~~wGvdyvK~D~ 131 (362)
T 1uas_A 71 TFPSGIKALADYVHAKGLKLGIYSDAGSQTCSNKMPGSLDHEEQDVKTFASWGVDYLKYDN 131 (362)
T ss_dssp TCTTCHHHHHHHHHHTTCEEEEEEESSSBCTTSSSBCCTTCHHHHHHHHHHHTCCEEEEEC
T ss_pred ccCccHHHHHHHHHHCCCEeEEEeeCCCccccCCCCCchhHHHHHHHHHHHcCCCEEEECc
Confidence 3566 99999999997744322 3454444556677888899999998865
No 117
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=23.10 E-value=3.8e+02 Score=23.45 Aligned_cols=66 Identities=11% Similarity=0.129 Sum_probs=37.0
Q ss_pred CCHHHHHHHHH---H--cCCeEEecCCcCCCC--hHHHHHHHHHcCCcEEEEecCcc----c---HHHHHHHHHHcCCce
Q 025874 66 PLAEVAVQLIH---R--TGGLAVLAHPWALKN--PAAIIRKLKDVGLHGLEVYRSDG----K---LVAYTDLADTYGLLK 131 (247)
Q Consensus 66 ~~~~EaI~~Ih---~--aGGvaVLAHP~~~~~--~~~li~~l~~~GlDGIEv~~~~~----~---~~~~~~lA~~~gLl~ 131 (247)
++.+|=.++++ + .|.++|+|+=+...- ..++.+...+.|.||+=+..|++ + .++|..+|+.-++.+
T Consensus 72 Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~lPi 151 (315)
T 3si9_A 72 LTHEEHKRIIELCVEQVAKRVPVVAGAGSNSTSEAVELAKHAEKAGADAVLVVTPYYNRPNQRGLYTHFSSIAKAISIPI 151 (315)
T ss_dssp SCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCSSCE
T ss_pred cCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHcCCCCE
Confidence 56665444332 2 356778877554221 12344555567888887776543 1 356677777655544
No 118
>3bdk_A D-mannonate dehydratase; xylose isomerase-like TIM barrel, lyase; HET: DNO; 2.50A {Streptococcus suis} PDB: 3ban_A* 3dbn_A* 3fvm_A
Probab=23.09 E-value=61 Score=29.77 Aligned_cols=17 Identities=6% Similarity=-0.136 Sum_probs=13.1
Q ss_pred HHHHHHHHHcCCceeec
Q 025874 118 VAYTDLADTYGLLKLGG 134 (247)
Q Consensus 118 ~~~~~lA~~~gLl~TGG 134 (247)
+...+.|.+.|.-+.+.
T Consensus 107 k~~i~~aa~lGi~~v~~ 123 (386)
T 3bdk_A 107 KTSIRNVGAAGIPVVCY 123 (386)
T ss_dssp HHHHHHHHTTTCCEEEE
T ss_pred HHHHHHHHHcCCCEEEE
Confidence 45567788888888887
No 119
>2dvt_A Thermophilic reversible gamma-resorcylate decarbo; TIM barrel, lyase; 1.70A {Rhizobium SP} SCOP: c.1.9.15 PDB: 2dvu_A* 2dvx_A* 3s4t_A*
Probab=23.04 E-value=2e+02 Score=24.12 Aligned_cols=64 Identities=9% Similarity=0.038 Sum_probs=36.9
Q ss_pred HHHHHHHHHcCC-e-E-EecCCcCCCChHHHHHHHH-HcCCcEEEEecCc---------c----cHHHHHHHHHHcCCce
Q 025874 69 EVAVQLIHRTGG-L-A-VLAHPWALKNPAAIIRKLK-DVGLHGLEVYRSD---------G----KLVAYTDLADTYGLLK 131 (247)
Q Consensus 69 ~EaI~~Ih~aGG-v-a-VLAHP~~~~~~~~li~~l~-~~GlDGIEv~~~~---------~----~~~~~~~lA~~~gLl~ 131 (247)
+.+.+++++..+ + . +.-||.......+.+++++ ..|+.||++.... . .-..+.++|.++|+.+
T Consensus 82 ~~~~~~~~~~p~r~~~~~~v~p~~~~~~~~el~~~~~~~g~~gi~i~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~lpv 161 (327)
T 2dvt_A 82 DVLAEECAKRPDRFLAFAALPLQDPDAATEELQRCVNDLGFVGALVNGFSQEGDGQTPLYYDLPQYRPFWGEVEKLDVPF 161 (327)
T ss_dssp HHHHHHHHHCTTTEEEEECCCTTSHHHHHHHHHHHHHTTCCCEEEEESSBCCTTCCSCBCTTSGGGHHHHHHHHHHTCCE
T ss_pred HHHHHHHhhCCCceEEEeecCcCCHHHHHHHHHHHHhcCCceEEEECCCCCCCcccCCCCCCCcchHHHHHHHHHcCCeE
Confidence 345666666654 2 1 2236642211224455665 4599999975321 1 1357788999999987
Q ss_pred e
Q 025874 132 L 132 (247)
Q Consensus 132 T 132 (247)
.
T Consensus 162 ~ 162 (327)
T 2dvt_A 162 Y 162 (327)
T ss_dssp E
T ss_pred E
Confidence 4
No 120
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=22.64 E-value=3.8e+02 Score=23.25 Aligned_cols=67 Identities=18% Similarity=0.185 Sum_probs=42.9
Q ss_pred CCCHHHHHHHHH---H--cCCeEEecCCcCCCC--hHHHHHHHHHcCCcEEEEecCcc----c---HHHHHHHHHHcCCc
Q 025874 65 EPLAEVAVQLIH---R--TGGLAVLAHPWALKN--PAAIIRKLKDVGLHGLEVYRSDG----K---LVAYTDLADTYGLL 130 (247)
Q Consensus 65 ~~~~~EaI~~Ih---~--aGGvaVLAHP~~~~~--~~~li~~l~~~GlDGIEv~~~~~----~---~~~~~~lA~~~gLl 130 (247)
.++.+|=.++++ + .|.++|+||=+...- ..++.+...+.|.||+=+..|++ + .++|.++|+.-++.
T Consensus 64 ~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lP 143 (304)
T 3l21_A 64 TTTDGEKIELLRAVLEAVGDRARVIAGAGTYDTAHSIRLAKACAAEGAHGLLVVTPYYSKPPQRGLQAHFTAVADATELP 143 (304)
T ss_dssp GSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHTSCSSC
T ss_pred hCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCC
Confidence 467776544443 2 466899998654321 22455666678999999987753 1 35777888876655
Q ss_pred e
Q 025874 131 K 131 (247)
Q Consensus 131 ~ 131 (247)
+
T Consensus 144 i 144 (304)
T 3l21_A 144 M 144 (304)
T ss_dssp E
T ss_pred E
Confidence 4
No 121
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=22.49 E-value=3.7e+02 Score=23.09 Aligned_cols=53 Identities=13% Similarity=0.107 Sum_probs=27.9
Q ss_pred CCeEEecCCcCCCC--hHHHHHHHHHcCCcEEEEecCcc----c---HHHHHHHHHHcCCce
Q 025874 79 GGLAVLAHPWALKN--PAAIIRKLKDVGLHGLEVYRSDG----K---LVAYTDLADTYGLLK 131 (247)
Q Consensus 79 GGvaVLAHP~~~~~--~~~li~~l~~~GlDGIEv~~~~~----~---~~~~~~lA~~~gLl~ 131 (247)
|.++|+||=+...- ..++.+...+.|.||+=+..|++ + .+++..+|+.-++.+
T Consensus 70 grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~~lPi 131 (292)
T 3daq_A 70 KRVPVIAGTGTNDTEKSIQASIQAKALGADAIMLITPYYNKTNQRGLVKHFEAIADAVKLPV 131 (292)
T ss_dssp TSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHHCSCE
T ss_pred CCCcEEEeCCcccHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCE
Confidence 55677776543221 11334445556777777665542 1 245666666555544
No 122
>3ch0_A Glycerophosphodiester phosphodiesterase; YP_677622.1, glycerophosphoryl diester phosphodiesterase, ST genomics; HET: MSE CIT GOL; 1.50A {Cytophaga hutchinsonii atcc 33406}
Probab=21.60 E-value=1.1e+02 Score=25.68 Aligned_cols=41 Identities=22% Similarity=0.495 Sum_probs=26.6
Q ss_pred HHHHHHHHHcCCeEEecCCcCCCChHHHHHHHHHcCCcEEEEecC
Q 025874 69 EVAVQLIHRTGGLAVLAHPWALKNPAAIIRKLKDVGLHGLEVYRS 113 (247)
Q Consensus 69 ~EaI~~Ih~aGGvaVLAHP~~~~~~~~li~~l~~~GlDGIEv~~~ 113 (247)
.+.|+.+|++| +.| |+|..++. ..+..+.+.|+|||-.-+|
T Consensus 226 ~~~v~~~~~~G-l~v--~~wTvn~~-~~~~~l~~~GvdgIiTD~P 266 (272)
T 3ch0_A 226 KKDIDAAHKLG-MRV--IPWTVNTK-EEIETLISLGVDGIITDYP 266 (272)
T ss_dssp HHHHHHHHHTT-CEE--CCBCCCSH-HHHHHHHHHTCSEEEESCG
T ss_pred HHHHHHHHHcC-CEE--EEeccCCH-HHHHHHHHcCCCEEEeCCH
Confidence 45777788765 444 45554443 4567777888888866554
No 123
>2o55_A Putative glycerophosphodiester phosphodiesterase; beta barrel, structural genomics, protein structure initiati 2; 2.81A {Galdieria sulphuraria}
Probab=21.58 E-value=98 Score=25.90 Aligned_cols=43 Identities=16% Similarity=0.174 Sum_probs=27.3
Q ss_pred HHHHHHHHHcCCeEEecCCcCC---CChHHHHHHHHHcCCcEEEEecCc
Q 025874 69 EVAVQLIHRTGGLAVLAHPWAL---KNPAAIIRKLKDVGLHGLEVYRSD 114 (247)
Q Consensus 69 ~EaI~~Ih~aGGvaVLAHP~~~---~~~~~li~~l~~~GlDGIEv~~~~ 114 (247)
.+.|+.+|++| +.|.+ |.. .+....+..+.+.|+|||-.-+|.
T Consensus 202 ~~~v~~~~~~G-~~v~~--wTv~~~~n~~~~~~~l~~~GvdgI~TD~p~ 247 (258)
T 2o55_A 202 KEQVCTAHEKG-LSVTV--WMPWIFDDSEEDWKKCLELQVDLICSNYPF 247 (258)
T ss_dssp HHHHHHHHHTT-CEEEE--ECCTTCCCCHHHHHHHHHHTCSEEEESCHH
T ss_pred HHHHHHHHHCC-CEEEE--eeCCCCCCCHHHHHHHHHcCCCEEEeCCHH
Confidence 46778888765 55543 333 133456777888888887765543
No 124
>3qvq_A Phosphodiesterase OLEI02445; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase, hydrolase; HET: MSE G3P; 1.60A {Oleispira antarctica}
Probab=21.45 E-value=80 Score=26.53 Aligned_cols=42 Identities=24% Similarity=0.306 Sum_probs=27.4
Q ss_pred HHHHHHHHHcCCeEEecCCcCCCChHHHHHHHHHcCCcEEEEecCc
Q 025874 69 EVAVQLIHRTGGLAVLAHPWALKNPAAIIRKLKDVGLHGLEVYRSD 114 (247)
Q Consensus 69 ~EaI~~Ih~aGGvaVLAHP~~~~~~~~li~~l~~~GlDGIEv~~~~ 114 (247)
++.|+.+|++| +.|.+ |..+. ...+..+.+.|+|||-.-+|.
T Consensus 200 ~~~v~~~~~~G-~~v~~--WTvn~-~~~~~~l~~~GVdgIiTD~P~ 241 (252)
T 3qvq_A 200 VQQVSDIKAAG-YKVLA--FTIND-ESLALKLYNQGLDAVFSDYPQ 241 (252)
T ss_dssp HHHHHHHHHTT-CEEEE--ECCCC-HHHHHHHHHTTCCEEEESSHH
T ss_pred HHHHHHHHHCC-CEEEE--EcCCC-HHHHHHHHHcCCCEEEeCCHH
Confidence 45677777764 45543 34343 466788889999998776653
No 125
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=21.23 E-value=2.1e+02 Score=24.27 Aligned_cols=52 Identities=17% Similarity=0.155 Sum_probs=35.0
Q ss_pred HHcCCeEEecCCcCCCChHHHHHHHHHcCCcEEEEecC-cccHHHHHHHHHHcC
Q 025874 76 HRTGGLAVLAHPWALKNPAAIIRKLKDVGLHGLEVYRS-DGKLVAYTDLADTYG 128 (247)
Q Consensus 76 h~aGGvaVLAHP~~~~~~~~li~~l~~~GlDGIEv~~~-~~~~~~~~~lA~~~g 128 (247)
.+.+=++|+-..-. .....+.+.+.+.|++.||+-.. ....+....+.+++.
T Consensus 11 ~~~~vi~Vir~~~~-~~a~~~a~al~~gGi~~iEvt~~t~~a~~~I~~l~~~~p 63 (217)
T 3lab_A 11 NTKPLIPVIVIDDL-VHAIPMAKALVAGGVHLLEVTLRTEAGLAAISAIKKAVP 63 (217)
T ss_dssp TSCSEEEEECCSCG-GGHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHCT
T ss_pred hhCCEEEEEEcCCH-HHHHHHHHHHHHcCCCEEEEeCCCccHHHHHHHHHHHCC
Confidence 44566788765422 22346788888999999999654 344566667777764
No 126
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=21.22 E-value=1.6e+02 Score=24.69 Aligned_cols=68 Identities=9% Similarity=0.030 Sum_probs=39.2
Q ss_pred eeCCCCCCHHHHHHHHHHc--CCeEEecCCcCCCChHHHHHHHHHcCCcEEEEecCc-ccHHHHHHHHHHcCC
Q 025874 60 YSTGSEPLAEVAVQLIHRT--GGLAVLAHPWALKNPAAIIRKLKDVGLHGLEVYRSD-GKLVAYTDLADTYGL 129 (247)
Q Consensus 60 yv~~~~~~~~EaI~~Ih~a--GGvaVLAHP~~~~~~~~li~~l~~~GlDGIEv~~~~-~~~~~~~~lA~~~gL 129 (247)
|||--...+ ++|+.|++. -.+.+-+|=.- .+++..++.+.++|.|.|=+..-. .+...+.+.++++|.
T Consensus 43 Fvpn~~~G~-~~v~~ir~~~~~~~~~dvhLmv-~~p~~~i~~~~~aGad~itvH~Ea~~~~~~~i~~i~~~G~ 113 (228)
T 3ovp_A 43 FVPNITFGH-PVVESLRKQLGQDPFFDMHMMV-SKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGM 113 (228)
T ss_dssp SSSCBCBCH-HHHHHHHHHHCSSSCEEEEEEC-SCGGGGHHHHHHHTCSEEEEEGGGCSCHHHHHHHHHHTTC
T ss_pred cCcccccCH-HHHHHHHHhhCCCCcEEEEEEe-CCHHHHHHHHHHcCCCEEEEccCCchhHHHHHHHHHHcCC
Confidence 555444443 366777666 24556666432 334456667777788877665422 245566666777664
No 127
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=20.88 E-value=3.7e+02 Score=23.76 Aligned_cols=67 Identities=16% Similarity=0.120 Sum_probs=37.9
Q ss_pred CCCHHHHHHHHH----H-cCCeEEecCCcCCCC--hHHHHHHHHHcCCcEEEEecCcc----c---HHHHHHHHHHcCCc
Q 025874 65 EPLAEVAVQLIH----R-TGGLAVLAHPWALKN--PAAIIRKLKDVGLHGLEVYRSDG----K---LVAYTDLADTYGLL 130 (247)
Q Consensus 65 ~~~~~EaI~~Ih----~-aGGvaVLAHP~~~~~--~~~li~~l~~~GlDGIEv~~~~~----~---~~~~~~lA~~~gLl 130 (247)
.++.+|=.++++ . .|.++|+|+=+...- ..++.+...+.|.||+=+..|++ + .++|..+|+.-++.
T Consensus 83 ~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~Y~~~s~~~l~~~f~~VA~a~~lP 162 (332)
T 2r8w_A 83 YLTREERRRAIEAAATILRGRRTLMAGIGALRTDEAVALAKDAEAAGADALLLAPVSYTPLTQEEAYHHFAAVAGATALP 162 (332)
T ss_dssp GSCHHHHHHHHHHHHHHHTTSSEEEEEECCSSHHHHHHHHHHHHHHTCSEEEECCCCSSCCCHHHHHHHHHHHHHHCSSC
T ss_pred hCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCC
Confidence 366665444433 2 345788887554221 12344555567888887766643 1 35667777765554
Q ss_pred e
Q 025874 131 K 131 (247)
Q Consensus 131 ~ 131 (247)
+
T Consensus 163 i 163 (332)
T 2r8w_A 163 L 163 (332)
T ss_dssp E
T ss_pred E
Confidence 4
No 128
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=20.79 E-value=2e+02 Score=23.95 Aligned_cols=69 Identities=12% Similarity=0.039 Sum_probs=45.0
Q ss_pred eeCCCCCCHHHHHHHHHHcCCeEEecCCcCCCChHHHHHHHHHcCCcEEEEecC--c-ccHHHHHHHHHHcCCc
Q 025874 60 YSTGSEPLAEVAVQLIHRTGGLAVLAHPWALKNPAAIIRKLKDVGLHGLEVYRS--D-GKLVAYTDLADTYGLL 130 (247)
Q Consensus 60 yv~~~~~~~~EaI~~Ih~aGGvaVLAHP~~~~~~~~li~~l~~~GlDGIEv~~~--~-~~~~~~~~lA~~~gLl 130 (247)
|||.-...+ +.++.+++.-...+.+|=.- .+++..++.+.++|.|||=+..- . .......+.++++|+.
T Consensus 43 fvp~~~~g~-~~v~~lr~~~~~~~~vhlmv-~dp~~~i~~~~~aGadgv~vh~e~~~~~~~~~~~~~i~~~g~~ 114 (230)
T 1tqj_A 43 FVPNITIGP-LIVDAIRPLTKKTLDVHLMI-VEPEKYVEDFAKAGADIISVHVEHNASPHLHRTLCQIRELGKK 114 (230)
T ss_dssp SSSCBCBCH-HHHHHHGGGCCSEEEEEEES-SSGGGTHHHHHHHTCSEEEEECSTTTCTTHHHHHHHHHHTTCE
T ss_pred CCcchhhhH-HHHHHHHhhcCCcEEEEEEc-cCHHHHHHHHHHcCCCEEEECcccccchhHHHHHHHHHHcCCc
Confidence 444333333 67788887655677777544 34555678888899999966654 2 3456677777888764
No 129
>2gwg_A 4-oxalomesaconate hydratase; TIM-barrel like protein, structural genomics, PSI, protein S initiative; 1.80A {Rhodopseudomonas palustris} SCOP: c.1.9.15
Probab=20.73 E-value=3e+02 Score=23.63 Aligned_cols=62 Identities=6% Similarity=0.021 Sum_probs=37.4
Q ss_pred HHHHHHHcCC--eEEecCCcCC----CChHHHHHHHH-HcCCcEEEEecC---------c-c--cHHHHHHHHHHcCCce
Q 025874 71 AVQLIHRTGG--LAVLAHPWAL----KNPAAIIRKLK-DVGLHGLEVYRS---------D-G--KLVAYTDLADTYGLLK 131 (247)
Q Consensus 71 aI~~Ih~aGG--vaVLAHP~~~----~~~~~li~~l~-~~GlDGIEv~~~---------~-~--~~~~~~~lA~~~gLl~ 131 (247)
+.++++...+ +++..||... ....+.+++++ ..|+.|||+... . . .-..+.+.|.++|+.+
T Consensus 96 ~~~~~~~~p~rf~~~~~~p~~~~~~~~~a~~eL~r~~~~~g~~Gv~l~~~~~~~~~~~~~l~d~~~~p~~~~a~e~~lpv 175 (350)
T 2gwg_A 96 CYRVSQLFPDNFIGAAMLPQSPGVDPKTCIPELEKCVKEYGFVAINLNPDPSGGHWTSPPLTDRIWYPIYEKMVELEIPA 175 (350)
T ss_dssp HHHHHHHSTTTEEEEEECCCCTTSCGGGGHHHHHHHHHTSCCCEEEECSCTTSSCCCSCCTTSGGGHHHHHHHHHHTCCE
T ss_pred HHHHHHhCCCcEEEEEeCCCCCCCCHHHHHHHHHHHHhccCCeEEEECCCCCCccCCCCCCCCHHHHHHHHHHHHcCCeE
Confidence 4555665544 3455566421 12234566666 579999998421 0 1 2357788999999987
Q ss_pred e
Q 025874 132 L 132 (247)
Q Consensus 132 T 132 (247)
.
T Consensus 176 ~ 176 (350)
T 2gwg_A 176 M 176 (350)
T ss_dssp E
T ss_pred E
Confidence 4
No 130
>4ggi_A UDP-2,3-diacylglucosamine pyrophosphatase LPXI; structural genomics, PSI-biology; HET: UDG; 2.52A {Caulobacter crescentus} PDB: 4ggm_X*
Probab=20.69 E-value=1.5e+02 Score=25.73 Aligned_cols=40 Identities=30% Similarity=0.318 Sum_probs=32.2
Q ss_pred HHHHHHHHHcCCcEEEEecCcc---cHHHHHHHHHHcCCceee
Q 025874 94 AAIIRKLKDVGLHGLEVYRSDG---KLVAYTDLADTYGLLKLG 133 (247)
Q Consensus 94 ~~li~~l~~~GlDGIEv~~~~~---~~~~~~~lA~~~gLl~TG 133 (247)
.+.++.+.++|+.||=+-.... +.+...+.|++||+.+.|
T Consensus 234 ~dti~~~~~ag~~~ivi~~g~si~~~~~~~i~~a~~~gi~~~~ 276 (283)
T 4ggi_A 234 VATIHRAARAGLAGIVGEAGRLLVVDREAVIAAADDLGLFVLG 276 (283)
T ss_dssp HHHHHHHHHTTCCEEEEETTBCEETTHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHcCCeEEEEcCCCcEEeCHHHHHHHHHHcCCEEEE
Confidence 4678889999999985544433 678889999999999876
No 131
>3mz2_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics; HET: MSE PE4; 1.55A {Parabacteroides distasonis}
Probab=20.43 E-value=2e+02 Score=24.91 Aligned_cols=47 Identities=15% Similarity=0.145 Sum_probs=30.3
Q ss_pred CHHHHHHHHHHcCCeEEecC-CcCCCC------hHHHHHHHHHcCCcEEEEecCc
Q 025874 67 LAEVAVQLIHRTGGLAVLAH-PWALKN------PAAIIRKLKDVGLHGLEVYRSD 114 (247)
Q Consensus 67 ~~~EaI~~Ih~aGGvaVLAH-P~~~~~------~~~li~~l~~~GlDGIEv~~~~ 114 (247)
...+.|+.+|+.|= .|.+. +...+. ....+..+++.|+|||-.-+|.
T Consensus 216 ~~~~~V~~ah~~G~-~V~vWTv~t~d~~~~~~~~~~~~~~L~~~GVDgIiTD~P~ 269 (292)
T 3mz2_A 216 EVREVIDMLHERGV-MCMISTAPSDDKLSTPESRAEAYRMIIRQGVDIIESDRPI 269 (292)
T ss_dssp HHHHHHHHHHHTTB-CEEEECTTTGGGSSSHHHHHHHHHHHHHTTCCEEEESCHH
T ss_pred cCHHHHHHHHHCCC-EEEEEeCCCcchhhhccccHHHHHHHHHcCCCEEEeCCHH
Confidence 34578999999874 34332 211110 1357888999999999877754
No 132
>1tz9_A Mannonate dehydratase; alpha-beta protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium; 2.90A {Enterococcus faecalis} SCOP: c.1.15.6
Probab=20.36 E-value=72 Score=28.20 Aligned_cols=17 Identities=6% Similarity=-0.177 Sum_probs=13.3
Q ss_pred HHHHHHHHHcCCceeec
Q 025874 118 VAYTDLADTYGLLKLGG 134 (247)
Q Consensus 118 ~~~~~lA~~~gLl~TGG 134 (247)
....+.|++.|+-..+-
T Consensus 98 ~~~i~~a~~lG~~~v~~ 114 (367)
T 1tz9_A 98 RQTLRNLGKCGISLVCY 114 (367)
T ss_dssp HHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHcCCCEEEE
Confidence 45667888999988876
No 133
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=20.29 E-value=3.7e+02 Score=23.24 Aligned_cols=89 Identities=11% Similarity=0.068 Sum_probs=54.8
Q ss_pred CCCHHHHHHHHH---H--cCCeEEecCCcCCC--ChHHHHHHHHHcCCcEEEEecCcc----c---HHHHHHHHHHcCCc
Q 025874 65 EPLAEVAVQLIH---R--TGGLAVLAHPWALK--NPAAIIRKLKDVGLHGLEVYRSDG----K---LVAYTDLADTYGLL 130 (247)
Q Consensus 65 ~~~~~EaI~~Ih---~--aGGvaVLAHP~~~~--~~~~li~~l~~~GlDGIEv~~~~~----~---~~~~~~lA~~~gLl 130 (247)
.++.+|=.++++ + .|.++|+|+=+... ...++.+...+.|.||+=+..|++ + .+++..+|+.-++.
T Consensus 53 ~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~lP 132 (300)
T 3eb2_A 53 YLGTAQREAVVRATIEAAQRRVPVVAGVASTSVADAVAQAKLYEKLGADGILAILEAYFPLKDAQIESYFRAIADAVEIP 132 (300)
T ss_dssp GCCHHHHHHHHHHHHHHHTTSSCBEEEEEESSHHHHHHHHHHHHHHTCSEEEEEECCSSCCCHHHHHHHHHHHHHHCSSC
T ss_pred ccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHHCCCC
Confidence 467776444443 2 46689999865432 122455666688999999987753 1 36788999887765
Q ss_pred eeecCCCCCCCCCCCccccCccCCHHHHHHHh
Q 025874 131 KLGGSDYHGRGGHGESELGSVKLPVLVLNDFL 162 (247)
Q Consensus 131 ~TGGSDfHG~~~~~~~~lG~~~ip~~~l~~i~ 162 (247)
+.- |+-|. .- .+.++.+.+.++.
T Consensus 133 iil---Yn~P~-----~t-g~~l~~~~~~~La 155 (300)
T 3eb2_A 133 VVI---YTNPQ-----FQ-RSDLTLDVIARLA 155 (300)
T ss_dssp EEE---EECTT-----TC-SSCCCHHHHHHHH
T ss_pred EEE---EECcc-----cc-CCCCCHHHHHHHH
Confidence 542 44432 11 2446667777764
No 134
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=20.13 E-value=2.8e+02 Score=24.03 Aligned_cols=63 Identities=21% Similarity=0.142 Sum_probs=0.0
Q ss_pred HHHHHHHHhhCCCCceeCC---CCCCHHHHHHHHHHcCCeEEecCCcCCCChHHHHHHHHHcCCcEEEEecCccc-----
Q 025874 45 LKQAFARYLYDGGPAYSTG---SEPLAEVAVQLIHRTGGLAVLAHPWALKNPAAIIRKLKDVGLHGLEVYRSDGK----- 116 (247)
Q Consensus 45 ~~eaF~~yL~~g~payv~~---~~~~~~EaI~~Ih~aGGvaVLAHP~~~~~~~~li~~l~~~GlDGIEv~~~~~~----- 116 (247)
.++.|.+.-.+++++++|. -+|+++. ..+++..|.+.|.|.||+=-|..+
T Consensus 7 i~~~f~~~~~~~~~ali~yi~aGdP~~~~----------------------~~~~~~~l~~~GaD~iElGiPfSDP~aDG 64 (271)
T 3nav_A 7 YQALFQRLSAAQQGAFVPFVTIGDPNPEQ----------------------SLAIMQTLIDAGADALELGMPFSDPLADG 64 (271)
T ss_dssp HHHHHHHHHHTTBCEEEEEEETTSSCHHH----------------------HHHHHHHHHHTTCSSEEEECCCCCGGGCC
T ss_pred HHHHHHHHHhcCCCeEEEEEeCCCCCHHH----------------------HHHHHHHHHHcCCCEEEECCCCCCCCCCC
Q ss_pred --HHHHHHHHHHcCC
Q 025874 117 --LVAYTDLADTYGL 129 (247)
Q Consensus 117 --~~~~~~lA~~~gL 129 (247)
.+.+..-|-+.|.
T Consensus 65 pvIq~a~~rAL~~G~ 79 (271)
T 3nav_A 65 PTIQGANLRALAAKT 79 (271)
T ss_dssp SHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHcCC
No 135
>2ffi_A 2-pyrone-4,6-dicarboxylic acid hydrolase, putativ; TIM-barrel protein., structural genomics, PSI, protein struc initiative; 2.61A {Pseudomonas putida} SCOP: c.1.9.15
Probab=20.06 E-value=2.2e+02 Score=23.49 Aligned_cols=60 Identities=8% Similarity=0.117 Sum_probs=37.4
Q ss_pred HHHHHHHHHcC----CeEEecCCcCCCChHHHHHHHHHcCCcEEEEecCcc--------cHHHHHHHHHHcCCcee
Q 025874 69 EVAVQLIHRTG----GLAVLAHPWALKNPAAIIRKLKDVGLHGLEVYRSDG--------KLVAYTDLADTYGLLKL 132 (247)
Q Consensus 69 ~EaI~~Ih~aG----GvaVLAHP~~~~~~~~li~~l~~~GlDGIEv~~~~~--------~~~~~~~lA~~~gLl~T 132 (247)
+.+++++.+.. |++ ..||... .+.++++.+.|+.|||+..... .-....++|+++|+.+.
T Consensus 70 ~~~~~~~~~~p~r~~~~~-~v~p~~~---~~el~~~~~~g~~Gi~~~~~~~~~~~~~~~~~~~~~~~a~~~~lpv~ 141 (288)
T 2ffi_A 70 RYLLSALQTVPGQLRGVV-MLERDVE---QATLAEMARLGVRGVRLNLMGQDMPDLTGAQWRPLLERIGEQGWHVE 141 (288)
T ss_dssp HHHHHHHHHSTTTBCCBB-CCCSSCC---HHHHHHHHTTTCCEEECCCSSSCCCCTTSTTTHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHCCCCEEEEE-EeCCCCC---HHHHHHHHHCCCeEEEEecccCCCCCcccHHHHHHHHHHHHCCCeEE
Confidence 45666666544 333 3477432 3556777778999998753211 13567788889998874
Done!