Query 025879
Match_columns 247
No_of_seqs 107 out of 1269
Neff 6.8
Searched_HMMs 29240
Date Mon Mar 25 19:39:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025879.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025879hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hb7_A Isochorismatase hydrola 100.0 1.6E-40 5.6E-45 284.0 16.4 174 27-241 5-182 (204)
2 3o94_A Nicotinamidase; hydrola 100.0 2.1E-40 7.1E-45 285.2 14.5 182 22-240 15-206 (211)
3 3lqy_A Putative isochorismatas 100.0 5.1E-40 1.7E-44 277.8 16.6 181 27-242 5-187 (190)
4 3r2j_A Alpha/beta-hydrolase-li 100.0 5.6E-40 1.9E-44 285.4 16.7 188 17-242 23-221 (227)
5 4h17_A Hydrolase, isochorismat 100.0 1E-39 3.5E-44 277.8 17.1 196 2-242 2-197 (197)
6 3irv_A Cysteine hydrolase; str 100.0 7.7E-40 2.6E-44 285.3 16.7 191 22-242 16-214 (233)
7 3eef_A N-carbamoylsarcosine am 100.0 5.1E-40 1.7E-44 275.9 14.4 169 28-241 1-171 (182)
8 3kl2_A Putative isochorismatas 100.0 6.7E-41 2.3E-45 290.7 7.7 200 6-242 3-215 (226)
9 3hu5_A Isochorismatase family 100.0 3.4E-39 1.2E-43 275.6 15.1 177 26-242 5-190 (204)
10 3v8e_A Nicotinamidase; hydrola 100.0 2.3E-39 7.7E-44 279.4 13.5 176 30-237 2-215 (216)
11 3gbc_A Pyrazinamidase/nicotina 100.0 2.4E-39 8.1E-44 273.2 11.5 173 29-238 1-185 (186)
12 3tg2_A Vibriobactin-specific i 100.0 2.3E-39 7.9E-44 280.8 11.0 183 14-241 14-201 (223)
13 1im5_A 180AA long hypothetical 100.0 3.4E-38 1.2E-42 264.0 17.6 167 28-237 2-179 (180)
14 1nf9_A Phenazine biosynthesis 100.0 2.4E-39 8.3E-44 276.7 9.9 185 14-242 17-206 (207)
15 3mcw_A Putative hydrolase; iso 100.0 4.9E-38 1.7E-42 267.4 16.1 182 22-241 6-187 (198)
16 2wt9_A Nicotinamidase; hydrola 100.0 1.5E-37 5E-42 271.0 16.5 177 27-242 28-232 (235)
17 3ot4_A Putative isochorismatas 100.0 1.2E-37 4E-42 272.2 14.4 180 24-244 39-226 (236)
18 1j2r_A Hypothetical isochorism 100.0 4.8E-37 1.6E-41 260.6 16.9 173 27-242 17-196 (199)
19 3oqp_A Putative isochorismatas 100.0 4.2E-37 1.4E-41 264.5 16.3 180 27-242 4-183 (211)
20 2a67_A Isochorismatase family 100.0 1.1E-36 3.7E-41 252.4 18.0 165 28-238 3-167 (167)
21 1nba_A N-carbamoylsarcosine am 100.0 9.2E-37 3.2E-41 270.6 14.8 177 25-241 40-227 (264)
22 2fq1_A Isochorismatase; ENTB, 100.0 4.1E-37 1.4E-41 275.1 12.4 189 13-243 17-210 (287)
23 3txy_A Isochorismatase family 100.0 2.6E-36 8.9E-41 257.0 13.3 176 22-242 8-190 (199)
24 1yac_A Ycacgp, YCAC gene produ 100.0 3.9E-32 1.3E-36 232.7 16.1 157 27-241 10-168 (208)
25 1yzv_A Hypothetical protein; s 100.0 8.5E-32 2.9E-36 230.3 9.5 166 17-245 9-182 (204)
26 2b34_A F35G2.2, MAR1 ribonucle 100.0 1.4E-31 4.6E-36 228.0 10.4 153 27-241 12-164 (199)
27 1x9g_A Putative MAR1; structur 100.0 1.5E-30 5.1E-35 221.9 14.9 159 22-245 14-178 (200)
28 1j0a_A 1-aminocyclopropane-1-c 53.3 23 0.0008 30.7 6.0 40 149-197 66-106 (325)
29 1f2d_A 1-aminocyclopropane-1-c 41.3 53 0.0018 28.6 6.4 42 148-198 62-104 (341)
30 3h7i_A Ribonuclease H, RNAse H 36.3 14 0.00048 32.7 1.8 43 143-193 111-153 (305)
31 4d9b_A D-cysteine desulfhydras 35.4 60 0.002 28.4 5.8 41 149-198 77-118 (342)
32 1tzj_A ACC deaminase, 1-aminoc 32.9 77 0.0026 27.3 6.1 40 149-197 63-103 (338)
33 2f9i_B Acetyl-coenzyme A carbo 25.4 1.3E+02 0.0043 26.0 6.0 44 31-85 122-165 (285)
34 3pdw_A Uncharacterized hydrola 23.4 1.1E+02 0.0039 24.6 5.2 39 31-83 7-45 (266)
35 1vp8_A Hypothetical protein AF 20.9 3.2E+02 0.011 22.4 7.2 64 147-237 38-103 (201)
36 1v77_A PH1877P, hypothetical p 20.6 75 0.0026 25.8 3.4 30 60-89 144-173 (212)
No 1
>3hb7_A Isochorismatase hydrolase; PS structural genomics, midwest center for structural genomics structure initiative; 2.30A {Alkaliphilus metalliredigens}
Probab=100.00 E-value=1.6e-40 Score=283.95 Aligned_cols=174 Identities=22% Similarity=0.298 Sum_probs=156.1
Q ss_pred CCceEEEEEecccccccCCCCCCCCCCCchhHHHHHHHHHHHHHHHH---hCCCcEEEEeecCCCCCCC-CCCCCCccCC
Q 025879 27 DVKTGLVLVDVVNGFCTVGSGNLAPSQPDGQISEMVDESVRLARVFC---EKKWPVFAFLDTHYPDVPE-PPYPPHCISG 102 (247)
Q Consensus 27 ~~~tALvvID~Qn~F~~~~~g~l~~~~~~~~~~~il~~i~~l~~~ar---~~g~pVi~~~~~h~~~~~~-~~wp~~~~~g 102 (247)
..++|||||||||+|++++ |.++.++ .+.+++++++|++.|| ..|+||||++++|.+.+++ ..||.||..|
T Consensus 5 m~~tALlvID~Q~~f~~~~-g~l~~~~----~~~ii~~i~~Ll~~ar~~~~~g~pVi~t~~~~~~~~~~~~~~~~~~~~g 79 (204)
T 3hb7_A 5 MAKHAILVIDMLNDFVGEK-APLRCPG----GETIIPDLQKIFEWVRGREGDDIHLVHIQEAHRKNDADFRVRPLHAVKG 79 (204)
T ss_dssp SCCEEEEEECCBTTTSSTT-CTTCCGG----GGGGHHHHHHHHHHHHHSSSSSEEEEEEEECBCCCSCCSSSSCSSCBTT
T ss_pred CCCeEEEEEcCchhhcCCC-CcccCcc----HHHHHHHHHHHHHHHHhhhhcCCEEEEEEccCCCCChhhhhcchhccCC
Confidence 3579999999999999874 6666443 3578999999999999 9999999999999877665 4799999999
Q ss_pred CCCCccccccccccCCcceEEEecCCcccccccccCCCcchHHHHHHhCCCCEEEEEeeecCcccccchhhHHHHHHCCC
Q 025879 103 TDESNLVPELQWLENETNVTLRRKDCIDGFLGSVEKDGSNVFVNWVKSNQIKNVLVLGICTDVCVLDFVCSTLSARNRGF 182 (247)
Q Consensus 103 t~g~~l~~~l~~~~~~~~~~vv~K~~~saF~~t~~~~~~t~L~~~L~~~~i~~lvi~G~~Td~CV~~~~~Ta~~A~~~Gy 182 (247)
++|++++++|.|.+++ .++.|++||+|++ |+|+.+|+++|+++|+|||++||+||. +|+++|+++||
T Consensus 80 t~g~~i~~~l~~~~~~---~vi~K~~~saF~~-------t~L~~~L~~~gi~~lvi~G~~T~~CV~---~Ta~dA~~~Gy 146 (204)
T 3hb7_A 80 TWGSDFIPELYPQEDE---YIVQKRRHSGFAH-------TDLDLYLKEEGIDTVVLTGVWTNVCVR---STATDALANAY 146 (204)
T ss_dssp STTTSBCGGGCCCTTC---EEEEESSSSTTTT-------SSHHHHHHHTTCCEEEEEEECTTTHHH---HHHHHHHHTTC
T ss_pred CchhhcCHhhCCCCCC---EEEeCCccCCccC-------ccHHHHHHHCCCCEEEEEeecccHHHH---HHHHHHHHCCC
Confidence 9999999999998754 7999999999999 599999999999999999999999999 99999999999
Q ss_pred CCCCCcEEEecCCCccCCcchhhhhcccccCCCchhhHHHHHHHHHhhCCcEEeecccc
Q 025879 183 LAPLEDVIVYSRGCATYDFPVHVAKNIKDALPHPQDLMHHIGLFIAKGRGAKVVSGVSF 241 (247)
Q Consensus 183 ~~~~~~ViVv~Da~as~~~~~h~a~~~~~~~~~~~~~~~~~~l~~~~~~~a~v~~~~~~ 241 (247)
+|+|++|||++++.+.| +.+|..|. .|+.|++++++
T Consensus 147 -----~V~vv~Da~as~~~~~h-----------------~~al~~l~-~~a~v~tt~~v 182 (204)
T 3hb7_A 147 -----KVITLSDGTASKTEEMH-----------------EYGLNDLS-IFTKVMTVDQY 182 (204)
T ss_dssp -----EEEEEEEEEECSSHHHH-----------------HHHHHHHH-HHSEEECHHHH
T ss_pred -----EEEEechhccCCCHHHH-----------------HHHHHHHH-hCCEEeeHHHH
Confidence 99999999999987654 66787888 89999998876
No 2
>3o94_A Nicotinamidase; hydrolase; 1.60A {Streptococcus pneumoniae} PDB: 3o90_A 3o91_A* 3o92_A* 3o93_A* 3s2s_A
Probab=100.00 E-value=2.1e-40 Score=285.23 Aligned_cols=182 Identities=23% Similarity=0.319 Sum_probs=153.7
Q ss_pred cccCCCCceEEEEEecccccccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHhCCCcEEEEeecCCCCCCC----CCCCC
Q 025879 22 LFLSGDVKTGLVLVDVVNGFCTVGSGNLAPSQPDGQISEMVDESVRLARVFCEKKWPVFAFLDTHYPDVPE----PPYPP 97 (247)
Q Consensus 22 ~~~~~~~~tALvvID~Qn~F~~~~~g~l~~~~~~~~~~~il~~i~~l~~~ar~~g~pVi~~~~~h~~~~~~----~~wp~ 97 (247)
++-..+|++|||||||||+|+.++ |+++.+. ..++++++|++|++.||+.|.||||++++|+++++. ..||+
T Consensus 15 ~~~~~~m~~ALlVID~QndF~~p~-G~l~~~~---~~~~ii~~i~~Li~~aR~~g~pVi~t~d~h~~~~~~~~~~~~~p~ 90 (211)
T 3o94_A 15 VPRGSHMTKALISIDYTEDFVADS-GKLTAGA---PAQAISDAISKVTRLAFERGDYIFFTIDAHEENDCFHPESKLFPP 90 (211)
T ss_dssp ------CCCEEEEESCBHHHHSTT-CTTCCCH---HHHTTHHHHHHHHHHHHHTTCEEEEEEECBCTTCTTCGGGGTSCS
T ss_pred ccCCCCCCeEEEEEcCchhhhCCC-CcccCCc---cHHHHHHHHHHHHHHHHHcCCeEEEEEeecCCCCccCcccccccc
Confidence 344457899999999999999864 6776542 235789999999999999999999999999877642 36999
Q ss_pred CccCCCCCCccccccccc-----cCCcceEEEecCCcccccccccCCCcchHHHHHHhCCCCEEEEEeeecCcccccchh
Q 025879 98 HCISGTDESNLVPELQWL-----ENETNVTLRRKDCIDGFLGSVEKDGSNVFVNWVKSNQIKNVLVLGICTDVCVLDFVC 172 (247)
Q Consensus 98 ~~~~gt~g~~l~~~l~~~-----~~~~~~~vv~K~~~saF~~t~~~~~~t~L~~~L~~~~i~~lvi~G~~Td~CV~~~~~ 172 (247)
||++||+|++++++|.+. +. +.+.++.|.+||+|++ |+|.++|+++|+++|+|||++||+||+ +
T Consensus 91 hcv~gt~G~el~~~L~~~~~~~~p~-~~d~vi~K~~~saF~~-------t~L~~~L~~~gi~~lvi~G~~T~~CV~---~ 159 (211)
T 3o94_A 91 HNLIGTSGRNLYGDLGIFYQEHGSD-SRVFWMDKRHYSAFSG-------TDLDIRLRERRVSTVILTGVLTDISVL---H 159 (211)
T ss_dssp CSBTTSGGGSBCTHHHHHHHHHTTS-TTEEEEEESSSSSSTT-------SSHHHHHHHTTCCEEEEEEECTTTHHH---H
T ss_pred cccCCChhHhhcHHHHHhhhhcCCC-CCcEEEEecccCcCCC-------chHHHHHHhCCCCeEEEEeeccChHHH---H
Confidence 999999999999999742 11 2358999999999999 599999999999999999999999999 9
Q ss_pred hHHHHHHCCCCCCCCcEEEecCCCccCCcchhhhhcccccCCCchhhHHHHHHHHHhh-CCcEEeeccc
Q 025879 173 STLSARNRGFLAPLEDVIVYSRGCATYDFPVHVAKNIKDALPHPQDLMHHIGLFIAKG-RGAKVVSGVS 240 (247)
Q Consensus 173 Ta~~A~~~Gy~~~~~~ViVv~Da~as~~~~~h~a~~~~~~~~~~~~~~~~~~l~~~~~-~~a~v~~~~~ 240 (247)
|+++|.++|| +|+|++|||++++.+.| ..+|..|+. .|+.|+++.-
T Consensus 160 Ta~~a~~~Gy-----~v~vv~Da~~~~~~~~h-----------------~~aL~~m~~~~G~~i~ts~~ 206 (211)
T 3o94_A 160 TAIDAYNLGY-----DIEIVKPAVASIWPENH-----------------QFALGHFKNTLGAKLVDENL 206 (211)
T ss_dssp HHHHHHHTTC-----EEEEEEEEEECSCHHHH-----------------HHHHHHHHHTSCCEEECTTS
T ss_pred HHHHHHHCCC-----EEEEechhhcCCCHHHH-----------------HHHHHHHHHHCCcEEechhh
Confidence 9999999999 99999999999998755 667878887 8999998653
No 3
>3lqy_A Putative isochorismatase hydrolase; structural genomics, PSI-2, PROT structure initiative, midwest center for structural genomic; 1.75A {Oleispira antarctica} SCOP: c.33.1.0
Probab=100.00 E-value=5.1e-40 Score=277.78 Aligned_cols=181 Identities=20% Similarity=0.275 Sum_probs=158.6
Q ss_pred CCceEEEEEeccccccc--CCCCCCCCCCCchhHHHHHHHHHHHHHHHHhCCCcEEEEeecCCCCCCCCCCCCCccCCCC
Q 025879 27 DVKTGLVLVDVVNGFCT--VGSGNLAPSQPDGQISEMVDESVRLARVFCEKKWPVFAFLDTHYPDVPEPPYPPHCISGTD 104 (247)
Q Consensus 27 ~~~tALvvID~Qn~F~~--~~~g~l~~~~~~~~~~~il~~i~~l~~~ar~~g~pVi~~~~~h~~~~~~~~wp~~~~~gt~ 104 (247)
+.++|||||||||+|++ ++ |.++.++ .+++++++++|++.||..|+||||+++.|+. .|++||..|++
T Consensus 5 ~~~~aLlvID~Q~~f~~~~~~-g~l~~~~----~~~~i~~i~~l~~~ar~~g~pVi~t~~~~~~-----~~~~~~~~gt~ 74 (190)
T 3lqy_A 5 ENTTALLLIDFQNDYFSTYNG-AKNPLVG----TEAAAEQGAKLLAKFRQQGLPVVHVRHEFPT-----DEAPFFLPGSD 74 (190)
T ss_dssp SCCEEEEEECCBGGGCTTSTT-CSSCCBT----HHHHHHHHHHHHHHHHHTTCCEEEEEECC-C-----TTCSSSCTTCG
T ss_pred CCCEEEEEEcCchhhhCcCCC-CccCcCC----HHHHHHHHHHHHHHHHHCCCeEEEEEEecCC-----CCCCcccCCCC
Confidence 67899999999999997 33 6676543 3588999999999999999999999987653 25679999999
Q ss_pred CCccccccccccCCcceEEEecCCcccccccccCCCcchHHHHHHhCCCCEEEEEeeecCcccccchhhHHHHHHCCCCC
Q 025879 105 ESNLVPELQWLENETNVTLRRKDCIDGFLGSVEKDGSNVFVNWVKSNQIKNVLVLGICTDVCVLDFVCSTLSARNRGFLA 184 (247)
Q Consensus 105 g~~l~~~l~~~~~~~~~~vv~K~~~saF~~t~~~~~~t~L~~~L~~~~i~~lvi~G~~Td~CV~~~~~Ta~~A~~~Gy~~ 184 (247)
|++++++|.|.+++ .++.|++||+|++ |+|.++|+++|+++|+|||++||+||. +|+++|.++||
T Consensus 75 g~~i~~~l~~~~~~---~vi~K~~~saF~~-------t~L~~~L~~~gi~~lii~G~~T~~CV~---~Ta~da~~~Gy-- 139 (190)
T 3lqy_A 75 GAKIHPSVAAQEGE---AVVLKHQINSFRD-------TDLKKVLDDAGIKKLVIVGAMTHMAID---AVTRAAEDLGY-- 139 (190)
T ss_dssp GGSBCGGGCCCTTS---CEEEESSSSTTTT-------SSHHHHHHHC-CCEEEEEEECTTTHHH---HHHHHHHHHTC--
T ss_pred ccccCcccCCCCCC---EEEECCCCCcccc-------chHHHHHHhCCCCEEEEEecCcChHHH---HHHHHHHHCCC--
Confidence 99999999998654 7899999999999 599999999999999999999999999 99999999999
Q ss_pred CCCcEEEecCCCccCCcchhhhhcccccCCCchhhHHHHHHHHHhhCCcEEeeccccc
Q 025879 185 PLEDVIVYSRGCATYDFPVHVAKNIKDALPHPQDLMHHIGLFIAKGRGAKVVSGVSFG 242 (247)
Q Consensus 185 ~~~~ViVv~Da~as~~~~~h~a~~~~~~~~~~~~~~~~~~l~~~~~~~a~v~~~~~~~ 242 (247)
+|+|++|||++++.+. .+. .++++..|+.+|..+...+|.|++++++.
T Consensus 140 ---~v~vv~Da~~s~~~~~-~~~------~~~a~~~h~~~L~~l~~~~a~V~tt~~~l 187 (190)
T 3lqy_A 140 ---ECAVAHDACATLDLEF-NGI------TVPAAQVHAAFMSALSFAYANVASADELI 187 (190)
T ss_dssp ---EEEEEEEEEEBCCEEE-TTE------EECHHHHHHHHHHHHBTTTBEEECHHHHH
T ss_pred ---EEEEechhhccCCccc-cCc------cCCHHHHHHHHHHHHhhCcEEEEEHHHHH
Confidence 9999999999999863 222 24788999999999999999999999874
No 4
>3r2j_A Alpha/beta-hydrolase-like protein; nicotinamidase, cytoplasmic; 2.68A {Leishmania infantum}
Probab=100.00 E-value=5.6e-40 Score=285.37 Aligned_cols=188 Identities=21% Similarity=0.285 Sum_probs=160.3
Q ss_pred CCccccccCCCCceEEEEEecccccccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHhCCCcEEEEeecCCCCCCC----
Q 025879 17 VEQESLFLSGDVKTGLVLVDVVNGFCTVGSGNLAPSQPDGQISEMVDESVRLARVFCEKKWPVFAFLDTHYPDVPE---- 92 (247)
Q Consensus 17 ~~~~~~~~~~~~~tALvvID~Qn~F~~~~~g~l~~~~~~~~~~~il~~i~~l~~~ar~~g~pVi~~~~~h~~~~~~---- 92 (247)
+++.++.++ ++++|||||||||+|++++ |++++++. ++++++|++|++.+|. .||||++++|++++..
T Consensus 23 ~~~~~~~l~-~~~~ALlVIDmQndF~~p~-G~l~~~~~----~~iv~~i~~Li~~ar~--~pVi~t~d~h~~~~~~f~~~ 94 (227)
T 3r2j_A 23 PPTLCVTVS-STTDVLIIADMQVDFLAPG-GSLHVKGG----EALLDGINAVSSQLPF--RYQVATQDWHPENHCSFVTH 94 (227)
T ss_dssp --CCCEECC-TTTEEEEEECCBHHHHSTT-CSSCCTTC----GGGHHHHHHHHHHSCC--SEEEEEEECBCTTCTTBGGG
T ss_pred CCCCCcccC-CCCeEEEEEcCchHhhCCC-CccCCCCH----HHHHHHHHHHHHHcCC--CeEEEEEeeCCCCccchhhh
Confidence 345668886 8899999999999999654 77877654 3789999999998875 5999999999876543
Q ss_pred -CCCCCCccCCCCCCccccccccccCCcceEEEecC------CcccccccccCCCcchHHHHHHhCCCCEEEEEeeecCc
Q 025879 93 -PPYPPHCISGTDESNLVPELQWLENETNVTLRRKD------CIDGFLGSVEKDGSNVFVNWVKSNQIKNVLVLGICTDV 165 (247)
Q Consensus 93 -~~wp~~~~~gt~g~~l~~~l~~~~~~~~~~vv~K~------~~saF~~t~~~~~~t~L~~~L~~~~i~~lvi~G~~Td~ 165 (247)
..||.||++|++|++|+++|.+.+++ .++.|+ +||+|+.... ..|+|..+|+++||++|+|||++||+
T Consensus 95 ~g~wp~h~~~gt~G~ei~~~L~~~~~d---~vi~K~~~~~~~~~SaF~~~~~--~~t~L~~~L~~~gi~~lvv~G~~T~~ 169 (227)
T 3r2j_A 95 GGPWPPHCVQGSAGAQLHAGLHTQRIN---AVIRKGVTQQADSYSAFVEDNG--VSTGLAGLLHSIGARRVFVCGVAYDF 169 (227)
T ss_dssp TSSBCSCSBTTSGGGSBCTTSCCTTCC---EEEEESCSTTCCCSSSSBCTTS--CBCSHHHHHHHHTCCEEEEEESCTTT
T ss_pred cCcCcccccCCCchhHHhHhhcccCCC---EEEECCCcccccccchhccCCC--CCCcHHHHHHHcCCCEEEEEEeccch
Confidence 46999999999999999999988654 789999 9999942100 11699999999999999999999999
Q ss_pred ccccchhhHHHHHHCCCCCCCCcEEEecCCCccCCcchhhhhcccccCCCchhhHHHHHHHHHhhCCcEEeeccccc
Q 025879 166 CVLDFVCSTLSARNRGFLAPLEDVIVYSRGCATYDFPVHVAKNIKDALPHPQDLMHHIGLFIAKGRGAKVVSGVSFG 242 (247)
Q Consensus 166 CV~~~~~Ta~~A~~~Gy~~~~~~ViVv~Da~as~~~~~h~a~~~~~~~~~~~~~~~~~~l~~~~~~~a~v~~~~~~~ 242 (247)
||+ +|+++|.++|| +|+|++|||++++.+.| ..++..|...|++|++++++.
T Consensus 170 CV~---~Ta~dA~~~Gy-----~V~Vv~Da~as~~~~~h-----------------~~aL~~m~~~g~~v~~s~~vl 221 (227)
T 3r2j_A 170 CVF---FTAMDARKNGF-----SVVLLEDLTAAVDDAAW-----------------SARTAELKDAGVVLLKSSALV 221 (227)
T ss_dssp HHH---HHHHHHHHTTC-----EEEEEEEEECCSCGGGH-----------------HHHHHHHHTTTCEEECGGGEE
T ss_pred HHH---HHHHHHHHCCC-----EEEEEhHhhCCCCHHHH-----------------HHHHHHHHHcCCEEEEHHHHH
Confidence 999 99999999999 99999999999998755 567888999999999998873
No 5
>4h17_A Hydrolase, isochorismatase family; rossmann-like fold, structural genomics, joint center for ST genomics, JCSG; 1.60A {Pseudomonas putida KT2440}
Probab=100.00 E-value=1e-39 Score=277.83 Aligned_cols=196 Identities=17% Similarity=0.174 Sum_probs=169.2
Q ss_pred CchhhHHhhhhccCCCCccccccCCCCceEEEEEecccccccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHhCCCcEEE
Q 025879 2 MMTSKTIDLLRNELPVEQESLFLSGDVKTGLVLVDVVNGFCTVGSGNLAPSQPDGQISEMVDESVRLARVFCEKKWPVFA 81 (247)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~tALvvID~Qn~F~~~~~g~l~~~~~~~~~~~il~~i~~l~~~ar~~g~pVi~ 81 (247)
|..++|++++.-.-+. .++ +.++|||||||||+|++ |++..+ ..+++++++++|++.||..|+||||
T Consensus 2 ~~~~~~~~~~~g~~~~-----~~~-~~~tALlvID~Q~~f~~---g~l~~~----~~~~~i~~i~~l~~~ar~~g~pVi~ 68 (197)
T 4h17_A 2 MSVPTTMFRLTGRDYP-----PAK-LSHASLIIIDAQKEYLS---GPLKLS----GMDEAVANIARLLDAARKSGRPIIH 68 (197)
T ss_dssp CCCCCCHHHHHTCCCC-----CCC-GGGEEEEEECCBGGGGS---STTCCT----THHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred CCcchhHHHHhCCCCC-----CCC-CCCeEEEEEcccchhhC---CccCCc----CHHHHHHHHHHHHHHHHHCCCeEEE
Confidence 5568899998543221 233 56899999999999998 456543 2458999999999999999999999
Q ss_pred EeecCCCCCCCCCCCCCccCCCCCCccccccccccCCcceEEEecCCcccccccccCCCcchHHHHHHhCCCCEEEEEee
Q 025879 82 FLDTHYPDVPEPPYPPHCISGTDESNLVPELQWLENETNVTLRRKDCIDGFLGSVEKDGSNVFVNWVKSNQIKNVLVLGI 161 (247)
Q Consensus 82 ~~~~h~~~~~~~~wp~~~~~gt~g~~l~~~l~~~~~~~~~~vv~K~~~saF~~t~~~~~~t~L~~~L~~~~i~~lvi~G~ 161 (247)
+++.|.++. .+|..|++| +++++|++.+++ .++.|+++|+|++ |+|+++|+++|+++|+|||+
T Consensus 69 t~~~~~~~~------~~~~~g~~g-~~~~~l~~~~~~---~vi~K~~~saF~~-------t~L~~~L~~~gi~~lvi~G~ 131 (197)
T 4h17_A 69 VRHLGTVGG------RFDPQGPAG-QFIPGLEPLEGE---IVIEKRMPNAFKN-------TKLHETLQELGHLDLIVCGF 131 (197)
T ss_dssp EEECCCTTS------TTCTTSGGG-SBCTTCCCCTTC---EEEEESSSSTTTT-------TCHHHHHHHHTCSEEEEEEE
T ss_pred EEEecCCCC------ccccCCCCc-cCCHhhCCCCCC---EEEeCCcCCCccc-------chHHHHHHhcCCCEEEEEee
Confidence 998876532 468889999 999999988754 7899999999999 59999999999999999999
Q ss_pred ecCcccccchhhHHHHHHCCCCCCCCcEEEecCCCccCCcchhhhhcccccCCCchhhHHHHHHHHHhhCCcEEeecccc
Q 025879 162 CTDVCVLDFVCSTLSARNRGFLAPLEDVIVYSRGCATYDFPVHVAKNIKDALPHPQDLMHHIGLFIAKGRGAKVVSGVSF 241 (247)
Q Consensus 162 ~Td~CV~~~~~Ta~~A~~~Gy~~~~~~ViVv~Da~as~~~~~h~a~~~~~~~~~~~~~~~~~~l~~~~~~~a~v~~~~~~ 241 (247)
+||+||+ +|+++|.++|| +|+|++|||++++.+.+.. .++++++|+.+|..+..++|+|++++++
T Consensus 132 ~T~~CV~---~Ta~da~~~Gy-----~V~vv~Da~as~~~~~~~~-------~~~a~~~h~~aL~~l~~~~a~V~tt~e~ 196 (197)
T 4h17_A 132 MSHSSVS---TTVRRAKDYGY-----RCTLVEDASATRDLAFKDG-------VIPAAQIHQCEMAVMADNFACVAPTASL 196 (197)
T ss_dssp CTTTHHH---HHHHHHHHTTC-----EEEEEEEEEECCCEEETTE-------EECHHHHHHHHHHHHHHHTCEEECGGGT
T ss_pred CcCHHHH---HHHHHHHHCCC-----EEEEeCccccccCcccccC-------CCCHHHHHHHHHHHHHhcceEEeEHHHc
Confidence 9999999 99999999999 9999999999999887643 3588999999999999999999999987
Q ss_pred c
Q 025879 242 G 242 (247)
Q Consensus 242 ~ 242 (247)
+
T Consensus 197 i 197 (197)
T 4h17_A 197 I 197 (197)
T ss_dssp C
T ss_pred C
Confidence 4
No 6
>3irv_A Cysteine hydrolase; structural genomics, PSI-2, protein structure initiative, CY hydrolase; 1.60A {Pseudomonas syringae PV}
Probab=100.00 E-value=7.7e-40 Score=285.26 Aligned_cols=191 Identities=17% Similarity=0.218 Sum_probs=166.5
Q ss_pred cccCCCCceEEEEEecccccccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHhCCCcEEEEeecCCCCCCCC-----CCC
Q 025879 22 LFLSGDVKTGLVLVDVVNGFCTVGSGNLAPSQPDGQISEMVDESVRLARVFCEKKWPVFAFLDTHYPDVPEP-----PYP 96 (247)
Q Consensus 22 ~~~~~~~~tALvvID~Qn~F~~~~~g~l~~~~~~~~~~~il~~i~~l~~~ar~~g~pVi~~~~~h~~~~~~~-----~wp 96 (247)
+.++ +.++|||||||||+|++++ |++..++ .+++++++++|++.||..|+||||+++.|.++.++. .||
T Consensus 16 ~~l~-~~~tALlvID~Q~~f~~~~-g~l~~~~----~~~vv~~i~~Ll~~ar~~g~pVi~t~~~~~~~~~~~~~~~~~~p 89 (233)
T 3irv_A 16 WPIN-PLRTAVIVVDMQKVFCEPT-GALYVKS----TADIVQPIQKLLQAARAAQVMVIYLRHIVRGDGSDTGRMRDLYP 89 (233)
T ss_dssp CCCC-GGGEEEEEECCBHHHHSTT-STTCCGG----GGGGHHHHHHHHHHHHHTTCEEEEEEECBCSSSTTCSHHHHHST
T ss_pred CCCC-CCCeEEEEECCchhhhCCC-CcccCCC----HHHHHHHHHHHHHHHHHcCCeEEEEEeecCCCccchhhhhhhcC
Confidence 5675 7899999999999999864 5665443 357899999999999999999999999887765542 477
Q ss_pred C---CccCCCCCCccccccccccCCcceEEEecCCcccccccccCCCcchHHHHHHhCCCCEEEEEeeecCcccccchhh
Q 025879 97 P---HCISGTDESNLVPELQWLENETNVTLRRKDCIDGFLGSVEKDGSNVFVNWVKSNQIKNVLVLGICTDVCVLDFVCS 173 (247)
Q Consensus 97 ~---~~~~gt~g~~l~~~l~~~~~~~~~~vv~K~~~saF~~t~~~~~~t~L~~~L~~~~i~~lvi~G~~Td~CV~~~~~T 173 (247)
. +|..|++|++++++|.|.+++ .++.|++||+|++ |+|+++|+++||++|+|||++||+||+ +|
T Consensus 90 ~~~~~~~~gt~g~ei~~~l~p~~~d---~vi~K~~~saF~~-------t~L~~~L~~~gi~~lvi~G~~T~~CV~---~T 156 (233)
T 3irv_A 90 NVDQILARHDPDVEVIEALAPQSDD---VIVDKLFYSGFHN-------TDLDTVLRARDVDTIIVCGTVTNVCCE---TT 156 (233)
T ss_dssp THHHHSBTTCGGGSBCGGGCCCTTS---EEEEESSSCSSTT-------STHHHHHHHTTCCEEEEEEECTTTHHH---HH
T ss_pred cccccccCCCCccccchhhCCCCCC---EEEECCccCCCcC-------CcHHHHHHhCCCCeEEEEeecccHHHH---HH
Confidence 6 899999999999999997654 7899999999999 599999999999999999999999999 99
Q ss_pred HHHHHHCCCCCCCCcEEEecCCCccCCcchhhhhcccccCCCchhhHHHHHHHHHhhCCcEEeeccccc
Q 025879 174 TLSARNRGFLAPLEDVIVYSRGCATYDFPVHVAKNIKDALPHPQDLMHHIGLFIAKGRGAKVVSGVSFG 242 (247)
Q Consensus 174 a~~A~~~Gy~~~~~~ViVv~Da~as~~~~~h~a~~~~~~~~~~~~~~~~~~l~~~~~~~a~v~~~~~~~ 242 (247)
+++|+++|| +|+|++|||++++.+.... -.++.+..|..+|..+...|+.|++++++.
T Consensus 157 a~dA~~~Gy-----~V~vv~Da~as~d~~~~~~------~~~~~~~~h~~aL~~l~~~~a~V~tt~evl 214 (233)
T 3irv_A 157 IRDGVHREY-----KVIALSDANAAMDYPDVGF------GAVSAADVQRISLTTIAYEFGEVTTTAEVI 214 (233)
T ss_dssp HHHHHHTTC-----EEEEEEEEEECCCBCCSSS------CCBCHHHHHHHHHHHHHHHTSEEECHHHHH
T ss_pred HHHHHHCCC-----EEEEechhhccCccccccc------ccCChHHHHHHHHHHHHhcCcEEeEHHHHH
Confidence 999999999 9999999999998764321 234678899999999999999999988873
No 7
>3eef_A N-carbamoylsarcosine amidase related protein; structural genomics, protein structure initiative, midwest center for structural genomics; 2.35A {Thermoplasma acidophilum}
Probab=100.00 E-value=5.1e-40 Score=275.86 Aligned_cols=169 Identities=27% Similarity=0.416 Sum_probs=149.6
Q ss_pred CceEEEEEecccccccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHhCCCcEEEEeecCCCCCCC-CCCCCCccCCCCCC
Q 025879 28 VKTGLVLVDVVNGFCTVGSGNLAPSQPDGQISEMVDESVRLARVFCEKKWPVFAFLDTHYPDVPE-PPYPPHCISGTDES 106 (247)
Q Consensus 28 ~~tALvvID~Qn~F~~~~~g~l~~~~~~~~~~~il~~i~~l~~~ar~~g~pVi~~~~~h~~~~~~-~~wp~~~~~gt~g~ 106 (247)
||+|||||||||+|.+ |+++.+ ..+.+++++++|++.||..|+||||++++|++++++ ..||+||..|++|+
T Consensus 1 mk~ALlvID~Q~~f~~---g~~~~~----~~~~~i~~i~~l~~~ar~~g~pVi~t~~~~~~~~~~~~~~~~~~~~g~~g~ 73 (182)
T 3eef_A 1 MKPALVVVDMVNEFIH---GRLATP----EAMKTVGPARKVIETFRRSGLPVVYVNDSHYPDDPEIRIWGRHSMKGDDGS 73 (182)
T ss_dssp CCEEEEEECCBHHHHT---STTCCH----HHHHHHHHHHHHHHHHHHTTCCEEEEEECBCTTSTTHHHHCSCSBTTSGGG
T ss_pred CCEEEEEEcCCCcCCC---CccCCc----cHHHHHHHHHHHHHHHHHcCCeEEEEecccCCCChhhhhcchhhcCCCchh
Confidence 6899999999999965 556543 346899999999999999999999999999887765 36999999999999
Q ss_pred ccccccccccCCcceEEEecCCcccccccccCCCcchHHHHHHhCCCCEEEEEeeecCcccccchhhHHHHHHCCCCCCC
Q 025879 107 NLVPELQWLENETNVTLRRKDCIDGFLGSVEKDGSNVFVNWVKSNQIKNVLVLGICTDVCVLDFVCSTLSARNRGFLAPL 186 (247)
Q Consensus 107 ~l~~~l~~~~~~~~~~vv~K~~~saF~~t~~~~~~t~L~~~L~~~~i~~lvi~G~~Td~CV~~~~~Ta~~A~~~Gy~~~~ 186 (247)
+++++|.|.+++ .++.|++||+|++ |+|.++|+++|+++|+|||++||+||+ +|+++|+++||
T Consensus 74 ~~~~~l~~~~~~---~vi~K~~~saF~~-------t~L~~~L~~~gi~~lii~G~~T~~CV~---~Ta~da~~~Gy---- 136 (182)
T 3eef_A 74 EVIDEIRPSAGD---YVLEKHAYSGFYG-------TNLDMILRANGIDTVVLIGLDADICVR---HTAADALYRNY---- 136 (182)
T ss_dssp SBCGGGCCCTTC---EEEEESSSSTTTT-------SSHHHHHHHTTCCEEEEEEECTTTHHH---HHHHHHHHTTC----
T ss_pred hhhhhhCCCCCc---EEEeecccCCCCC-------CCHHHHHHhcCCCeEEEEEeccCHHHH---HHHHHHHHCCC----
Confidence 999999988754 7899999999999 599999999999999999999999999 99999999999
Q ss_pred CcEEEecCCCccCCcchhhhhcccccCCCchhhHHHHHHHHHhh-CCcEEeecccc
Q 025879 187 EDVIVYSRGCATYDFPVHVAKNIKDALPHPQDLMHHIGLFIAKG-RGAKVVSGVSF 241 (247)
Q Consensus 187 ~~ViVv~Da~as~~~~~h~a~~~~~~~~~~~~~~~~~~l~~~~~-~~a~v~~~~~~ 241 (247)
+|+|++|||++ ++.| +.+ ..|.. .|+.|++++++
T Consensus 137 -~V~vv~Da~as--~~~~-----------------~~a-~~m~~~~ga~v~~~~~v 171 (182)
T 3eef_A 137 -RIIVVEDAVAA--RIDP-----------------NWK-DYFTRVYGATVKRSDEI 171 (182)
T ss_dssp -EEEEEEEEEEC--SSCT-----------------THH-HHHHHHHCCEEECTTCC
T ss_pred -EEEEehhhcCC--HHHH-----------------HHH-HHHHHhcCcEEeEHHHH
Confidence 99999999999 4444 334 56777 69999998876
No 8
>3kl2_A Putative isochorismatase; structural genomics, unknown function, PSI-2, protein struct initiative; 2.30A {Streptomyces avermitilis} SCOP: c.33.1.0
Probab=100.00 E-value=6.7e-41 Score=290.72 Aligned_cols=200 Identities=19% Similarity=0.179 Sum_probs=157.4
Q ss_pred hHHhhhhccCCCCccccccCCCCceEEEEEecccccccCCCCCCCCCCC-chhHHHHHHHHHHHHHHHHhCCCcEEEEee
Q 025879 6 KTIDLLRNELPVEQESLFLSGDVKTGLVLVDVVNGFCTVGSGNLAPSQP-DGQISEMVDESVRLARVFCEKKWPVFAFLD 84 (247)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~tALvvID~Qn~F~~~~~g~l~~~~~-~~~~~~il~~i~~l~~~ar~~g~pVi~~~~ 84 (247)
-|++.+++.+|.-..++.++ +.++|||||||||+|++++ |.+..... ....+++++++++|++.||+.|+||||+++
T Consensus 3 ~~~~~~~~~~~~m~~~~~l~-~~~tALlVID~Qndf~~~~-g~l~~~~~~~~~~~~vv~~i~~Ll~~ar~~g~pVi~~~~ 80 (226)
T 3kl2_A 3 LTTSKTRKSGVAMTEKLELD-PARTAIVLIEYQNEFTSDG-GVLHGAVADVMQHTGMLANTVAVVDAARQAGVPIMHAPI 80 (226)
T ss_dssp --------------CCCCCC-GGGEEEEEECCBHHHHSTT-CTTHHHHHHHHHHHTHHHHHHHHHHHHHHHTCCEEEECC
T ss_pred ccHHHHHhhccccCcCccCC-CCCeEEEEEcCchhhhCCC-ccccccccccccHHHHHHHHHHHHHHHHHcCCeEEEEEe
Confidence 35688999888645557776 7899999999999999974 55531100 012457999999999999999999999999
Q ss_pred cCCCCCCCCC-----------CCCCccCCCCCCccccccccccCCcceEEEecCC-cccccccccCCCcchHHHHHHhCC
Q 025879 85 THYPDVPEPP-----------YPPHCISGTDESNLVPELQWLENETNVTLRRKDC-IDGFLGSVEKDGSNVFVNWVKSNQ 152 (247)
Q Consensus 85 ~h~~~~~~~~-----------wp~~~~~gt~g~~l~~~l~~~~~~~~~~vv~K~~-~saF~~t~~~~~~t~L~~~L~~~~ 152 (247)
.|.+++++.. |+.+|..|++|++++++|+|.+++ .++.|.+ ||+|++ |+|.++|+++|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~g~ei~~~L~p~~~d---~vi~Kk~~~SaF~~-------t~L~~~L~~~g 150 (226)
T 3kl2_A 81 TFAEGYGELTRHPYGILKGVVDGKAFVKGTWGAAIVDELAPVNGD---IVIEGKRGLDTFAS-------TNLDFILRSKG 150 (226)
T ss_dssp CBCTTCTTSCSSCCTHHHHHHHHTCSBTTSTTTSBCGGGCCCTTC---EECCCCCSSSHHHH-------SSHHHHHHHHT
T ss_pred eeCCCccccccccchhhhcccCCCcccCCCcccccCHhhCCCCCC---EEEecCCccCCccC-------chHHHHHhCCC
Confidence 9888777532 578999999999999999998764 6777665 999999 59999999999
Q ss_pred CCEEEEEeeecCcccccchhhHHHHHHCCCCCCCCcEEEecCCCccCCcchhhhhcccccCCCchhhHHHHHHHHHhhCC
Q 025879 153 IKNVLVLGICTDVCVLDFVCSTLSARNRGFLAPLEDVIVYSRGCATYDFPVHVAKNIKDALPHPQDLMHHIGLFIAKGRG 232 (247)
Q Consensus 153 i~~lvi~G~~Td~CV~~~~~Ta~~A~~~Gy~~~~~~ViVv~Da~as~~~~~h~a~~~~~~~~~~~~~~~~~~l~~~~~~~ 232 (247)
+++|+|||++||+||+ +|+++|+++|| +|+|++|||++++.+.| +.+|..+...+
T Consensus 151 i~~lii~G~~T~~CV~---~Ta~da~~~Gy-----~v~vv~Da~~s~~~~~h-----------------~~aL~~~~~~~ 205 (226)
T 3kl2_A 151 VDTIVLGGFLTNCCVE---STMRTGYERGF-----RVITLTDCVAATSQEEH-----------------NNAISYDFPMF 205 (226)
T ss_dssp CCEEEEEEECTTTHHH---HHHHHHHHTTC-----EEEEEEEEEECSCHHHH-----------------HHHHHHTHHHH
T ss_pred CCcEEEeccCcchHHH---HHHHHHHHCCC-----EEEEechhhcCCCHHHH-----------------HHHHHHHHHhc
Confidence 9999999999999999 99999999999 99999999999998765 56776566678
Q ss_pred cEEeeccccc
Q 025879 233 AKVVSGVSFG 242 (247)
Q Consensus 233 a~v~~~~~~~ 242 (247)
+.|++++++.
T Consensus 206 a~v~tt~e~l 215 (226)
T 3kl2_A 206 SVPMTSADVI 215 (226)
T ss_dssp SEEECHHHHH
T ss_pred eEEeeHHHHH
Confidence 8898988773
No 9
>3hu5_A Isochorismatase family protein; structural genomics, protein structure INI NEW YORK structural genomix research consortium, nysgxrc; 1.50A {Desulfovibrio vulgaris}
Probab=100.00 E-value=3.4e-39 Score=275.63 Aligned_cols=177 Identities=19% Similarity=0.273 Sum_probs=152.0
Q ss_pred CCCceEEEEEecccccccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHhCCCcEEEEeecCCCCCCC------CCCC---
Q 025879 26 GDVKTGLVLVDVVNGFCTVGSGNLAPSQPDGQISEMVDESVRLARVFCEKKWPVFAFLDTHYPDVPE------PPYP--- 96 (247)
Q Consensus 26 ~~~~tALvvID~Qn~F~~~~~g~l~~~~~~~~~~~il~~i~~l~~~ar~~g~pVi~~~~~h~~~~~~------~~wp--- 96 (247)
.+.++|||||||||+|+.++ |++..++ .+++++++++|++.||..|+||||+...|.++..+ ..|+
T Consensus 5 ~~~~tALlvID~Q~~f~~~~-g~l~~~~----~~~iv~~i~~L~~~ar~~g~pVi~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (204)
T 3hu5_A 5 RNRTVALAIIDMQNDFVLPG-APACVEG----AMGTVPVIAGLLAKARAEGWMVLHVVRAHRADGSDAEKSREHLFLEGG 79 (204)
T ss_dssp -CCCEEEEEECCBHHHHSTT-STTCCTT----HHHHHHHHHHHHHHHHHHTCEEEEEECCBCTTSTTSCGGGGGGGSSSC
T ss_pred CCCCeEEEEECCchhhhCCC-CcccccC----HHHHHHHHHHHHHHHHHCCCeEEEEEcccCCCcccccccccccCCccc
Confidence 36799999999999999764 6666543 35889999999999999999999975444444322 2354
Q ss_pred CCccCCCCCCccccccccccCCcceEEEecCCcccccccccCCCcchHHHHHHhCCCCEEEEEeeecCcccccchhhHHH
Q 025879 97 PHCISGTDESNLVPELQWLENETNVTLRRKDCIDGFLGSVEKDGSNVFVNWVKSNQIKNVLVLGICTDVCVLDFVCSTLS 176 (247)
Q Consensus 97 ~~~~~gt~g~~l~~~l~~~~~~~~~~vv~K~~~saF~~t~~~~~~t~L~~~L~~~~i~~lvi~G~~Td~CV~~~~~Ta~~ 176 (247)
++|+.||+|++|+++|.|.+++ .++.|++||+|++ |+|+.+|+++||++|+|||++||+||+ +|+++
T Consensus 80 ~~~~~gt~g~ei~~~l~~~~~~---~vi~K~~~saF~~-------t~L~~~L~~~gi~~lvi~G~~T~~CV~---~Ta~d 146 (204)
T 3hu5_A 80 GLCVAGTPGAEIVAGLEPASGE---TVLVKTRFSAFMG-------TECDMLLRRRGVDTLLVSGTQYPNCIR---GTAVD 146 (204)
T ss_dssp CSSBTTSGGGSBCTTCCCCTTC---EEEECSSSSTTTT-------SSHHHHHHHTTCCEEEEEEECTTTHHH---HHHHH
T ss_pred ccccCCCcccccccccCCCCCC---EEEECCccCCCCC-------cCHHHHHHhCCCCeEEEeeeccchHHH---HHHHH
Confidence 4699999999999999998754 7899999999999 599999999999999999999999999 99999
Q ss_pred HHHCCCCCCCCcEEEecCCCccCCcchhhhhcccccCCCchhhHHHHHHHHHhhCCcEEeeccccc
Q 025879 177 ARNRGFLAPLEDVIVYSRGCATYDFPVHVAKNIKDALPHPQDLMHHIGLFIAKGRGAKVVSGVSFG 242 (247)
Q Consensus 177 A~~~Gy~~~~~~ViVv~Da~as~~~~~h~a~~~~~~~~~~~~~~~~~~l~~~~~~~a~v~~~~~~~ 242 (247)
|.++|| +|+|++|||++++++.| ..++..|...|++|++++++.
T Consensus 147 a~~~Gy-----~V~vv~Da~as~~~~~h-----------------~~al~~m~~~g~~v~tt~e~l 190 (204)
T 3hu5_A 147 AFALDY-----DVVVVTDACSARTPGVA-----------------ESNINDMRAMGITCVPLTALD 190 (204)
T ss_dssp HHHTTC-----EEEEEEEEEECSSHHHH-----------------HHHHHHHHHHTCEEECGGGHH
T ss_pred HHHCCC-----EEEEehhhhCCCCHHHH-----------------HHHHHHHHHhCCEEEEHHHHH
Confidence 999999 99999999999887654 667888899999999999884
No 10
>3v8e_A Nicotinamidase; hydrolase; HET: JJJ; 2.71A {Saccharomyces cerevisiae} PDB: 2h0r_A
Probab=100.00 E-value=2.3e-39 Score=279.42 Aligned_cols=176 Identities=17% Similarity=0.195 Sum_probs=149.5
Q ss_pred eEEEEEecccccccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHhCCCcEEEEeecCCCCCCC-----------------
Q 025879 30 TGLVLVDVVNGFCTVGSGNLAPSQPDGQISEMVDESVRLARVFCEKKWPVFAFLDTHYPDVPE----------------- 92 (247)
Q Consensus 30 tALvvID~Qn~F~~~~~g~l~~~~~~~~~~~il~~i~~l~~~ar~~g~pVi~~~~~h~~~~~~----------------- 92 (247)
+|||||||||||++++ |+|++++. ++++++|++|++.||..|.||||++|+|++++..
T Consensus 2 ~ALlvID~QndF~~p~-G~l~v~~~----~~iv~~i~~ll~~~r~~~~~Vi~t~d~H~~~h~sf~~~~~g~~~f~~~~~~ 76 (216)
T 3v8e_A 2 KTLIVVDMQNDFISPL-GSLTVPKG----EELINPISDLMQDADRDWHRIVVTRDWHPSRHISFAKNHKDKEPYSTYTYH 76 (216)
T ss_dssp EEEEEECCBHHHHSTT-STTCCTTG----GGGHHHHHHHHHCGGGCEEEEEEEEECBCTTCTTBGGGSTTCCTTCEEEEE
T ss_pred cEEEEEcCcccccCCC-CcccCCCH----HHHHHHHHHHHHHHhhcCCEEEEecccCCCcCcchHhcCCCCCCcceeecc
Confidence 7999999999999764 78887654 4789999999999999999999999999876421
Q ss_pred ------------CCCCCCccCCCCCCccccccccc---cCCcceEEEec------CCcccccccccCCCcchHHHHHHhC
Q 025879 93 ------------PPYPPHCISGTDESNLVPELQWL---ENETNVTLRRK------DCIDGFLGSVEKDGSNVFVNWVKSN 151 (247)
Q Consensus 93 ------------~~wp~~~~~gt~g~~l~~~l~~~---~~~~~~~vv~K------~~~saF~~t~~~~~~t~L~~~L~~~ 151 (247)
..||.||++||+|++|+++|.+. +. +.++.| .+||+|+... ...+|+|..+|+++
T Consensus 77 ~p~~~~~~~~~~~~wp~hcv~gt~G~ei~~~l~~~~~~~~---~~vi~K~~~~~~~~ySaF~~~~-~~~~t~L~~~L~~~ 152 (216)
T 3v8e_A 77 SPRPGDDSTQEGILWPVHCVKNTWGSQLVDQIMDQVVTKH---IKIVDKGFLTDREYYSAFHDIW-NFHKTDMNKYLEKH 152 (216)
T ss_dssp CSSTTCCCEEEEECBCSCCBTTSGGGSBCHHHHHHHHHHT---CEEEEECCSTTSCCCSSSBCTT-SCSBCSHHHHHHHT
T ss_pred ccccccccccccccCchhhcCCCCccccCHhHHhhhccCc---cEEEECCccCCCccccccccCC-cCCCchHHHHHHhC
Confidence 15999999999999999999984 33 378899 5689996310 01127999999999
Q ss_pred CCCEEEEEeeecCcccccchhhHHHHHHCCCCCCCCcEEEecCCCccCCcchhhhhcccccCCCchhhHHHHHHHHHhhC
Q 025879 152 QIKNVLVLGICTDVCVLDFVCSTLSARNRGFLAPLEDVIVYSRGCATYDFPVHVAKNIKDALPHPQDLMHHIGLFIAKGR 231 (247)
Q Consensus 152 ~i~~lvi~G~~Td~CV~~~~~Ta~~A~~~Gy~~~~~~ViVv~Da~as~~~~~h~a~~~~~~~~~~~~~~~~~~l~~~~~~ 231 (247)
||++|+|||++||+||. +|+++|.++|| +|+|++|||++++.+.+ .|+.++..|+..
T Consensus 153 gi~~l~i~G~~t~~CV~---~Ta~~a~~~g~-----~v~v~~Da~~~~~~~~~---------------~~~~al~~m~~~ 209 (216)
T 3v8e_A 153 HTDEVYIVGVALEYXVK---ATAISAAELGY-----KTTVLLDYTRPISDDPE---------------VINKVKEELKAH 209 (216)
T ss_dssp TCCEEEEEEECTTTHHH---HHHHHHHHTTC-----EEEEEEEEEECSSCCHH---------------HHHHHHHHHHHT
T ss_pred CCCEEEEEEeccccHHH---HHHHHHHHCCC-----EEEEeccccCCCCcccH---------------HHHHHHHHHHHc
Confidence 99999999999999999 99999999999 99999999999998721 146778889999
Q ss_pred CcEEee
Q 025879 232 GAKVVS 237 (247)
Q Consensus 232 ~a~v~~ 237 (247)
|+.|++
T Consensus 210 Gv~i~~ 215 (216)
T 3v8e_A 210 NINVVD 215 (216)
T ss_dssp TCEEEC
T ss_pred CCEEeC
Confidence 999875
No 11
>3gbc_A Pyrazinamidase/nicotinamidas PNCA; nicotinamidase - pyrazinamidase, resistance to pyrazinamide, hydrolase; 2.20A {Mycobacterium tuberculosis} PDB: 3pl1_A
Probab=100.00 E-value=2.4e-39 Score=273.19 Aligned_cols=173 Identities=28% Similarity=0.418 Sum_probs=148.2
Q ss_pred ceEEEEEecccccccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHhCCCcEEEEeecCC-C-C----CCC--CCCCCCcc
Q 025879 29 KTGLVLVDVVNGFCTVGSGNLAPSQPDGQISEMVDESVRLARVFCEKKWPVFAFLDTHY-P-D----VPE--PPYPPHCI 100 (247)
Q Consensus 29 ~tALvvID~Qn~F~~~~~g~l~~~~~~~~~~~il~~i~~l~~~ar~~g~pVi~~~~~h~-~-~----~~~--~~wp~~~~ 100 (247)
++|||||||||+|++. |++++++ .++++++|++|++.||+ +.|||+++++|. + + .++ ..||.||+
T Consensus 1 ~~ALlvID~Q~df~~~--g~l~~~~----~~~vv~~i~~li~~~r~-~~~Vi~t~d~h~~p~~~~~~~~~~~~~wp~hc~ 73 (186)
T 3gbc_A 1 MRALIIVDVQNDFCEG--GSLAVTG----GAALARAISDYLAEAAD-YHHVVATKDFHIDPGDHFSGTPDYSSSWPPHCV 73 (186)
T ss_dssp CEEEEEECCBGGGSTT--STTCCTT----HHHHHHHHTTSSSSCCC-CSEEEEEEECBSCCGGGBCSSCCSSSCBCCCSB
T ss_pred CeEEEEEcCCCcCCCC--CcccCCC----HHHHHHHHHHHHHHhcc-CCEEEEEEEEcCCCCcccccCccccccCccccc
Confidence 3799999999999963 6787654 35889999999999999 999999999984 2 2 122 36999999
Q ss_pred CCCCCCccccccccccCCcceEEEecCC----cccccccccCCCcchHHHHHHhCCCCEEEEEeeecCcccccchhhHHH
Q 025879 101 SGTDESNLVPELQWLENETNVTLRRKDC----IDGFLGSVEKDGSNVFVNWVKSNQIKNVLVLGICTDVCVLDFVCSTLS 176 (247)
Q Consensus 101 ~gt~g~~l~~~l~~~~~~~~~~vv~K~~----~saF~~t~~~~~~t~L~~~L~~~~i~~lvi~G~~Td~CV~~~~~Ta~~ 176 (247)
.||+|++++++|.+.+.+ .++.|++ ||+|+++.. ..|+|.++|+++||++|+|||++||+||. +|+++
T Consensus 74 ~gt~g~~~~~~l~~~~~d---~vi~K~~~~~~ysaF~~~~~--~~t~L~~~L~~~gi~~lvv~G~~t~~CV~---~Ta~d 145 (186)
T 3gbc_A 74 SGTPGADFHPSLDTSAIE---AVFYKGAYTGAYSGFEGVDE--NGTPLLNWLRQRGVDEVDVVGIATDHCVR---QTAED 145 (186)
T ss_dssp TTSGGGSBCSSSCCTTCC---EEEEECSSSCCCCGGGCBCS--SSCBHHHHHHHTTCCEEEEEEECTTTHHH---HHHHH
T ss_pred CCCCcccCChhhhccCCc---EEEECCCCCccccccccCCC--CCCcHHHHHHhcCCCEEEEEEecccHHHH---HHHHH
Confidence 999999999999988654 7899988 699983210 01699999999999999999999999999 99999
Q ss_pred HHHCCCCCCCCcEEEecCCCccCCcchhhhhcccccCCCchhhHHHHHHHHHhhCCcEEeec
Q 025879 177 ARNRGFLAPLEDVIVYSRGCATYDFPVHVAKNIKDALPHPQDLMHHIGLFIAKGRGAKVVSG 238 (247)
Q Consensus 177 A~~~Gy~~~~~~ViVv~Da~as~~~~~h~a~~~~~~~~~~~~~~~~~~l~~~~~~~a~v~~~ 238 (247)
|.++|| +|+|++|||++++++.| ..++..|+..|+.|++|
T Consensus 146 a~~~G~-----~v~v~~Da~~~~~~~~~-----------------~~al~~m~~~G~~i~~s 185 (186)
T 3gbc_A 146 AVRNGL-----ATRVLVDLTAGVSADTT-----------------VAALEEMRTASVELVCS 185 (186)
T ss_dssp HHHTTC-----EEEEEEEEEECSCHHHH-----------------HHHHHHHHHTTCEEECC
T ss_pred HHHCCC-----eEEEEhhhcCCCCHHHH-----------------HHHHHHHHHcCCEEeec
Confidence 999999 99999999999987655 66788899999999886
No 12
>3tg2_A Vibriobactin-specific isochorismatase; hydrolase; HET: ISC PGE; 1.10A {Vibrio cholerae} PDB: 3tb4_A*
Probab=100.00 E-value=2.3e-39 Score=280.79 Aligned_cols=183 Identities=16% Similarity=0.222 Sum_probs=155.2
Q ss_pred cCCCCccccccCCCCceEEEEEecccccccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHhCCCcEEEEeecCCCCCCCC
Q 025879 14 ELPVEQESLFLSGDVKTGLVLVDVVNGFCTVGSGNLAPSQPDGQISEMVDESVRLARVFCEKKWPVFAFLDTHYPDVPEP 93 (247)
Q Consensus 14 ~~~~~~~~~~~~~~~~tALvvID~Qn~F~~~~~g~l~~~~~~~~~~~il~~i~~l~~~ar~~g~pVi~~~~~h~~~~~~~ 93 (247)
++|.+.-.|.++ +.++|||||||||+|+++. + ... +...++++||++|++.||..|+||||++++|.++.++.
T Consensus 14 ~~p~~~~~w~ld-p~rtALlVIDmQ~~F~~~~-~-~~~----~~~~~vv~~i~~Li~~ar~~g~pVi~t~~~~~~~~~~~ 86 (223)
T 3tg2_A 14 SLPTNKVDWRID-ASRAVLLIHNMQEYFVHYF-D-SQA----EPIPSLIKHIQQLKAHAKQAGIPVVYTAQPANQDPAER 86 (223)
T ss_dssp SCCCCSSCCCCC-TTTEEEEEECCBHHHHTTB-C-TTS----TTHHHHHHHHHHHHHHHHHHTCCEEEEECCSSCCHHHH
T ss_pred ccCCCCCCCcCC-CCCeEEEEEcCchhhhCcc-c-ccc----ccHHHHHHHHHHHHHHHHHcCCeEEEEEEeCCCCchhh
Confidence 445444567887 8899999999999999853 1 211 13468999999999999999999999999887665431
Q ss_pred -----CCCCCccCCCCCCccccccccccCCcceEEEecCCcccccccccCCCcchHHHHHHhCCCCEEEEEeeecCcccc
Q 025879 94 -----PYPPHCISGTDESNLVPELQWLENETNVTLRRKDCIDGFLGSVEKDGSNVFVNWVKSNQIKNVLVLGICTDVCVL 168 (247)
Q Consensus 94 -----~wp~~~~~gt~g~~l~~~l~~~~~~~~~~vv~K~~~saF~~t~~~~~~t~L~~~L~~~~i~~lvi~G~~Td~CV~ 168 (247)
.|+.+ +++|++++++|.|.+++ .++.|.+||+|++ |+|+.+|+++|+++|+|||++||+||.
T Consensus 87 ~~~~~~~~~~---~~~~~~i~~eL~p~~~d---~vi~K~~~saF~~-------t~L~~~L~~~gi~~lii~G~~t~~CV~ 153 (223)
T 3tg2_A 87 ALLSDFWGPG---LSEETAIIAPLAPESGD---VQLTKWRYSAFKK-------SPLLDWLRETGRDQLIITGVYAHIGIL 153 (223)
T ss_dssp TTHHHHHCSC---CSSCCSBCGGGCCCTTS---EEEECCSSSTTTT-------SSHHHHHHHHTCCEEEEEEECTTTHHH
T ss_pred cccccccCCC---CCcccccChhhCCCCCC---EEEECCccccccc-------ccHHHHHHhcCcCceEEeecccChHHH
Confidence 24443 36788999999998765 8999999999999 599999999999999999999999999
Q ss_pred cchhhHHHHHHCCCCCCCCcEEEecCCCccCCcchhhhhcccccCCCchhhHHHHHHHHHhhCCcEEeecccc
Q 025879 169 DFVCSTLSARNRGFLAPLEDVIVYSRGCATYDFPVHVAKNIKDALPHPQDLMHHIGLFIAKGRGAKVVSGVSF 241 (247)
Q Consensus 169 ~~~~Ta~~A~~~Gy~~~~~~ViVv~Da~as~~~~~h~a~~~~~~~~~~~~~~~~~~l~~~~~~~a~v~~~~~~ 241 (247)
+|+++|+++|| +|+|++|||++++.+.| +.+|..|...|+.|++++++
T Consensus 154 ---~Ta~da~~~Gy-----~v~vv~Da~as~~~~~h-----------------~~aL~~~~~~~a~v~tte~~ 201 (223)
T 3tg2_A 154 ---STALDAFMFDI-----QPFVIGDGVADFSLSDH-----------------EFSLRYISGRTGAVKSTQQA 201 (223)
T ss_dssp ---HHHHHHHHTTC-----EEEEEEEEEECSSHHHH-----------------HHHHHHHHHHTCEEECHHHH
T ss_pred ---HHHHHHHHCCC-----EEEEeCcccCCCCHHHH-----------------HHHHHHHHHcCCEEecHHHH
Confidence 99999999999 99999999999988755 67888999999999998776
No 13
>1im5_A 180AA long hypothetical pyrazinamidase/nicotinamidase; pyrazinamide, tuberculosis, PZA resistance, drug resistance, metal ION catalysis; 1.65A {Pyrococcus horikoshii} SCOP: c.33.1.3 PDB: 1ilw_A
Probab=100.00 E-value=3.4e-38 Score=263.96 Aligned_cols=167 Identities=25% Similarity=0.401 Sum_probs=146.7
Q ss_pred CceEEEEEecccccccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHhCCCcEEEEeecCCCCCCC-----CCCCCCccCC
Q 025879 28 VKTGLVLVDVVNGFCTVGSGNLAPSQPDGQISEMVDESVRLARVFCEKKWPVFAFLDTHYPDVPE-----PPYPPHCISG 102 (247)
Q Consensus 28 ~~tALvvID~Qn~F~~~~~g~l~~~~~~~~~~~il~~i~~l~~~ar~~g~pVi~~~~~h~~~~~~-----~~wp~~~~~g 102 (247)
+++|||||||||+|++. |.++.++. +++++++++|++.||..|+||||++++|+++.+. ..||.||..|
T Consensus 2 ~~~aLlvID~Q~~f~~~--g~l~~~~~----~~~v~~i~~l~~~ar~~g~pVi~t~~~~~~~~~~f~~~~~~~p~~~~~g 75 (180)
T 1im5_A 2 PEEALIVVDMQRDFMPG--GALPVPEG----DKIIPKVNEYIRKFKEKGALIVATRDWHPENHISFRERGGPWPRHCVQN 75 (180)
T ss_dssp CCEEEEEECCBGGGSTT--SSSCCTTG----GGGHHHHHHHHHHHHHTTCEEEEEEECBCTTCTTBGGGTCSBCSCSBTT
T ss_pred CccEEEEEcCCCccCCC--CcccCCCH----HHHHHHHHHHHHHHHHcCCEEEEEecccCCCCcChhhcCCCCchhhcCC
Confidence 47999999999999942 66765433 4789999999999999999999999999876553 3699999999
Q ss_pred CCCCccccccccccCCcceEEEecCC------cccccccccCCCcchHHHHHHhCCCCEEEEEeeecCcccccchhhHHH
Q 025879 103 TDESNLVPELQWLENETNVTLRRKDC------IDGFLGSVEKDGSNVFVNWVKSNQIKNVLVLGICTDVCVLDFVCSTLS 176 (247)
Q Consensus 103 t~g~~l~~~l~~~~~~~~~~vv~K~~------~saF~~t~~~~~~t~L~~~L~~~~i~~lvi~G~~Td~CV~~~~~Ta~~ 176 (247)
++|++++ |.+... +.++.|++ ||+|++ |+|..+|+++|+++|+|||++||+||+ +|+++
T Consensus 76 t~g~~i~--l~~~~~---~~vi~K~~~~~~~~~saF~~-------t~L~~~L~~~gi~~lvi~G~~t~~CV~---~Ta~d 140 (180)
T 1im5_A 76 TPGAEFV--VDLPED---AVIISKATEPDKEAYSGFEG-------TDLAKILRGNGVKRVYICGVATEYCVR---ATALD 140 (180)
T ss_dssp SGGGSBC--SCCCTT---CEEEEECCSTTCCCCSTTTT-------SSHHHHHHHTTCCEEEEEEECTTTHHH---HHHHH
T ss_pred CCCeEEE--EecCCC---cEEEECCCCCCCccccCccC-------CCHHHHHHhCCCCEEEEEEeecCHHHH---HHHHH
Confidence 9999998 765433 37899999 999999 599999999999999999999999999 99999
Q ss_pred HHHCCCCCCCCcEEEecCCCccCCcchhhhhcccccCCCchhhHHHHHHHHHhhCCcEEee
Q 025879 177 ARNRGFLAPLEDVIVYSRGCATYDFPVHVAKNIKDALPHPQDLMHHIGLFIAKGRGAKVVS 237 (247)
Q Consensus 177 A~~~Gy~~~~~~ViVv~Da~as~~~~~h~a~~~~~~~~~~~~~~~~~~l~~~~~~~a~v~~ 237 (247)
|.++|| +|+|++|||++++.+.| +.++..|...|++|++
T Consensus 141 a~~~Gy-----~v~vv~Da~~~~~~~~h-----------------~~al~~m~~~g~~v~~ 179 (180)
T 1im5_A 141 ALKHGF-----EVYLLRDAVKGIKPEDE-----------------ERALEEMKSRGIKIVQ 179 (180)
T ss_dssp HHHTTC-----EEEEEEEEEECSCHHHH-----------------HHHHHHHHHTTCEEEC
T ss_pred HHHCCC-----EEEEehhhccCCCHHHH-----------------HHHHHHHHHcCCEEEe
Confidence 999999 99999999999987654 6778889999999875
No 14
>1nf9_A Phenazine biosynthesis protein PHZD; isochorismatase, enzyme, phenazine pathway, hydrolase; HET: BOG; 1.50A {Pseudomonas aeruginosa} SCOP: c.33.1.3 PDB: 1nf8_A* 3r77_A*
Probab=100.00 E-value=2.4e-39 Score=276.72 Aligned_cols=185 Identities=18% Similarity=0.166 Sum_probs=159.2
Q ss_pred cCCCCccccccCCCCceEEEEEecccccccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHhCCCcEEEEeecCCCCCCC-
Q 025879 14 ELPVEQESLFLSGDVKTGLVLVDVVNGFCTVGSGNLAPSQPDGQISEMVDESVRLARVFCEKKWPVFAFLDTHYPDVPE- 92 (247)
Q Consensus 14 ~~~~~~~~~~~~~~~~tALvvID~Qn~F~~~~~g~l~~~~~~~~~~~il~~i~~l~~~ar~~g~pVi~~~~~h~~~~~~- 92 (247)
++|.++.++.++ ++++|||||||||+|+++. | .....++++++++|++.||..|+||||++++|..+..+
T Consensus 17 ~~~~~~~~~~l~-~~~tALlvID~Q~~f~~~~-~-------~~~~~~~i~~i~~l~~~ar~~g~pVi~t~~~~~~~~~~~ 87 (207)
T 1nf9_A 17 QLPANLARWSLE-PRRAVLLVHDMQRYFLRPL-P-------ESLRAGLVANAARLRRWCVEQGVQIAYTAQPGSMTEEQR 87 (207)
T ss_dssp GSCCCSSCCCCC-GGGEEEEEESCBHHHHTTS-C-------HHHHHHHHHHHHHHHHHHHHHTCEEEEEECCSSCCHHHH
T ss_pred cCCCCCcCcccC-CCCeEEEEECChHHhcCCC-C-------cccHHHHHHHHHHHHHHHHHcCCeEEEEeecCCCChhhh
Confidence 466666678886 7899999999999999852 1 12346899999999999999999999999876543211
Q ss_pred ----CCCCCCccCCCCCCccccccccccCCcceEEEecCCcccccccccCCCcchHHHHHHhCCCCEEEEEeeecCcccc
Q 025879 93 ----PPYPPHCISGTDESNLVPELQWLENETNVTLRRKDCIDGFLGSVEKDGSNVFVNWVKSNQIKNVLVLGICTDVCVL 168 (247)
Q Consensus 93 ----~~wp~~~~~gt~g~~l~~~l~~~~~~~~~~vv~K~~~saF~~t~~~~~~t~L~~~L~~~~i~~lvi~G~~Td~CV~ 168 (247)
..|+.||..|++|++++++|.+.+++ .++.|++||+|++ |+|+.+|+++|+++|+|||++||+||.
T Consensus 88 ~~~~~~~~~~~~~g~~g~~i~~~l~p~~~~---~vi~K~~~saF~~-------t~L~~~L~~~gi~~lvi~G~~T~~CV~ 157 (207)
T 1nf9_A 88 GLLKDFWGPGMRASPADREVVEELAPGPDD---WLLTKWRYSAFFH-------SDLLQRMRAAGRDQLVLCGVYAHVGVL 157 (207)
T ss_dssp TTHHHHHTTCCCSSHHHHSBCGGGCCCTTS---EEEECCSSSTTTT-------SSHHHHHHHTTCCEEEEEEECTTTHHH
T ss_pred hhhhhhcCCCCCCCCchhhhchhhCCCCCC---EEEecCCCCCcCC-------CcHHHHHHHcCCCEEEEEeeecChHHH
Confidence 24788999999999999999987654 7899999999999 599999999999999999999999999
Q ss_pred cchhhHHHHHHCCCCCCCCcEEEecCCCccCCcchhhhhcccccCCCchhhHHHHHHHHHhhCCcEEeeccccc
Q 025879 169 DFVCSTLSARNRGFLAPLEDVIVYSRGCATYDFPVHVAKNIKDALPHPQDLMHHIGLFIAKGRGAKVVSGVSFG 242 (247)
Q Consensus 169 ~~~~Ta~~A~~~Gy~~~~~~ViVv~Da~as~~~~~h~a~~~~~~~~~~~~~~~~~~l~~~~~~~a~v~~~~~~~ 242 (247)
+|+++|+++|| +|+|++|||++++.+. |+.+|..+...|+.|++++++.
T Consensus 158 ---~Ta~dA~~~Gy-----~V~vv~Da~as~~~~~-----------------h~~al~~~~~~~~~v~~t~~~l 206 (207)
T 1nf9_A 158 ---ISTVDAYSNDI-----QPFLVADAIADFSEAH-----------------HRMALEYAASRCAMVVTTDEVL 206 (207)
T ss_dssp ---HHHHHHHHTTC-----EEEEEEEEEECSSHHH-----------------HHHHHHHHHHHTCEEECHHHHH
T ss_pred ---HHHHHHHHCCC-----EEEEeCcccCCCCHHH-----------------HHHHHHHHHHhCcEEccHHHHh
Confidence 99999999999 9999999999998764 4667888889999999988764
No 15
>3mcw_A Putative hydrolase; isochorismatase family, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.06A {Chromobacterium violaceum}
Probab=100.00 E-value=4.9e-38 Score=267.42 Aligned_cols=182 Identities=20% Similarity=0.265 Sum_probs=156.1
Q ss_pred cccCCCCceEEEEEecccccccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHhCCCcEEEEeecCCCCCCCCCCCCCccC
Q 025879 22 LFLSGDVKTGLVLVDVVNGFCTVGSGNLAPSQPDGQISEMVDESVRLARVFCEKKWPVFAFLDTHYPDVPEPPYPPHCIS 101 (247)
Q Consensus 22 ~~~~~~~~tALvvID~Qn~F~~~~~g~l~~~~~~~~~~~il~~i~~l~~~ar~~g~pVi~~~~~h~~~~~~~~wp~~~~~ 101 (247)
..++ ++++|||||||||+|+++. +...+. .++++++++|++.||..|+||||+++.|..... .+..
T Consensus 6 ~~~~-~~~~ALlvID~Q~~f~~~~---~~~~~~----~~~i~~i~~l~~~ar~~g~pVi~~~~~~~~~~~------~~~~ 71 (198)
T 3mcw_A 6 LRFS-SDKPLLLLIDMQQAVDDPS---WGPRNH----PQAEQACAGLLQAWRARGLPLIHIRHDSVEPNS------TYRP 71 (198)
T ss_dssp CCCS-SSCCEEEEECCBGGGGSGG---GCCBSC----TTHHHHHHHHHHHHHHHTCCEEEEEECCCCTTC------TTCT
T ss_pred cccC-CCCCEEEEEeCchhhcCCC---ccccCh----HHHHHHHHHHHHHHHHCCCEEEEEEEecCCCCC------CCCC
Confidence 4554 7899999999999999742 322222 368999999999999999999999987654221 1235
Q ss_pred CCCCCccccccccccCCcceEEEecCCcccccccccCCCcchHHHHHHhCCCCEEEEEeeecCcccccchhhHHHHHHCC
Q 025879 102 GTDESNLVPELQWLENETNVTLRRKDCIDGFLGSVEKDGSNVFVNWVKSNQIKNVLVLGICTDVCVLDFVCSTLSARNRG 181 (247)
Q Consensus 102 gt~g~~l~~~l~~~~~~~~~~vv~K~~~saF~~t~~~~~~t~L~~~L~~~~i~~lvi~G~~Td~CV~~~~~Ta~~A~~~G 181 (247)
|++|++++++|+|.+++ .++.|++||+|++ |+|+++|+++|+++|+|||++||+||. +|+++|+++|
T Consensus 72 g~~g~~i~~~l~~~~~~---~vi~K~~~saF~~-------t~L~~~L~~~gi~~lvi~G~~T~~CV~---~Ta~da~~~G 138 (198)
T 3mcw_A 72 GQPGHAFKPEVEPRPGE---TVIAKQTNSAFIG-------TGLEALLRANGWLELVVAGVSTSNSVE---ATVRMAGNLG 138 (198)
T ss_dssp TSGGGSBCGGGCCCTTC---EEEEESSSSTTTT-------SSHHHHHHHHTCCEEEEEEECTTTHHH---HHHHHHHHTT
T ss_pred cCCccccCcccCCCCCC---EEEEcCccCcccc-------chHHHHHHcCCCCeEEEEEcCcChHHH---HHHHHHHHCC
Confidence 89999999999998654 7899999999999 599999999999999999999999999 9999999999
Q ss_pred CCCCCCcEEEecCCCccCCcchhhhhcccccCCCchhhHHHHHHHHHhhCCcEEeecccc
Q 025879 182 FLAPLEDVIVYSRGCATYDFPVHVAKNIKDALPHPQDLMHHIGLFIAKGRGAKVVSGVSF 241 (247)
Q Consensus 182 y~~~~~~ViVv~Da~as~~~~~h~a~~~~~~~~~~~~~~~~~~l~~~~~~~a~v~~~~~~ 241 (247)
| +|+|++|||++++.+.+.+..+ +.+..|+.+|..+...|+.|++++++
T Consensus 139 y-----~v~vv~Da~~s~~~~~~~g~~~------~~~~~h~~al~~l~~~~a~v~tt~~~ 187 (198)
T 3mcw_A 139 F-----AVCLAEDGCFTFDKTDWHGRRR------SADEVHAMSLANLDGEYCRVCGSADI 187 (198)
T ss_dssp C-----EEEEEEEEEECBCEECTTSCEE------CHHHHHHHHHHHHBTTTBEEECHHHH
T ss_pred C-----EEEEeCcccccccccccccccC------CHHHHHHHHHHHHHhccEEEeeHHHH
Confidence 9 9999999999999977655443 77899999999999999999998877
No 16
>2wt9_A Nicotinamidase; hydrolase, pyrazinamidase; HET: GOL; 1.65A {Acinetobacter baumannii} PDB: 2wta_A*
Probab=100.00 E-value=1.5e-37 Score=270.97 Aligned_cols=177 Identities=26% Similarity=0.403 Sum_probs=148.1
Q ss_pred CCceEEEEEecccccccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHhCCCcEEEEeecCCCCCCC--------------
Q 025879 27 DVKTGLVLVDVVNGFCTVGSGNLAPSQPDGQISEMVDESVRLARVFCEKKWPVFAFLDTHYPDVPE-------------- 92 (247)
Q Consensus 27 ~~~tALvvID~Qn~F~~~~~g~l~~~~~~~~~~~il~~i~~l~~~ar~~g~pVi~~~~~h~~~~~~-------------- 92 (247)
++++|||||||||+|++. |++++++. ++++++|++|++. +.||||++++|++++..
T Consensus 28 ~~~~ALlVID~Qndf~~~--g~l~~~~~----~~vv~~i~~Li~~----~~pVi~t~~~h~~~~~~f~~~~~~~~~~~~~ 97 (235)
T 2wt9_A 28 PQNSALVVVDVQNGFTPG--GNLAVADA----DTIIPTINQLAGC----FENVVLTQDWHPDNHISFAANHPGKQPFETI 97 (235)
T ss_dssp CTTEEEEEECCBGGGSTT--STTCCTTG----GGGHHHHHHHHTT----CSCEEEEEECBCTTCTTBGGGSTTCCTTCEE
T ss_pred CCCeEEEEEcCCcCcCCC--CccCCCCH----HHHHHHHHHHHHc----CCEEEEEeccCCCcchhhHhcCCCCCccccc
Confidence 678999999999999952 67776543 4789999999976 47999999998776321
Q ss_pred -------CCCCCCccCCCCCCccccccccccCCcceEEEecC------CcccccccccCCCcchHHHHHHhCCCCEEEEE
Q 025879 93 -------PPYPPHCISGTDESNLVPELQWLENETNVTLRRKD------CIDGFLGSVEKDGSNVFVNWVKSNQIKNVLVL 159 (247)
Q Consensus 93 -------~~wp~~~~~gt~g~~l~~~l~~~~~~~~~~vv~K~------~~saF~~t~~~~~~t~L~~~L~~~~i~~lvi~ 159 (247)
..||.||++||+|++|+++|.+.+++ .++.|. +||+|++. .....|+|+.+|+++||++|+||
T Consensus 98 ~~~~~~~~~wp~hcv~gt~g~~i~~~L~~~~~d---~vi~K~~~~~~~~~SaF~~~-~~~~~T~L~~~L~~~gi~~lvv~ 173 (235)
T 2wt9_A 98 ELDYGSQVLWPKHCIQGTHDAEFHPDLNIPTAQ---LIIRKGFHAHIDSYSAFMEA-DHTTMTGLTGYLKERGIDTVYVV 173 (235)
T ss_dssp EETTEEEECBCSCCBTTSGGGSBCTTCCCTTCC---EEEEECCSTTCCCSSSSBCT-TSCCBCSHHHHHHHTTCCEEEEE
T ss_pred ccccccccCCcchhcCCCchhHhChhhcccCCC---EEEECCCCCCCccccccccC-CccCCCcHHHHHHHCCCCEEEEE
Confidence 24999999999999999999988654 788886 69999831 00112699999999999999999
Q ss_pred eeecCcccccchhhHHHHHHCCCCCCCCcEEEecCCCccCC-cchhhhhcccccCCCchhhHHHHHHHHHhhCCcEEeec
Q 025879 160 GICTDVCVLDFVCSTLSARNRGFLAPLEDVIVYSRGCATYD-FPVHVAKNIKDALPHPQDLMHHIGLFIAKGRGAKVVSG 238 (247)
Q Consensus 160 G~~Td~CV~~~~~Ta~~A~~~Gy~~~~~~ViVv~Da~as~~-~~~h~a~~~~~~~~~~~~~~~~~~l~~~~~~~a~v~~~ 238 (247)
|++||+||+ +|+++|.++|| +|+|++|||++++ ++.| +.+|..|...|+.|+++
T Consensus 174 G~~T~~CV~---~Ta~dA~~~Gy-----~V~Vv~Da~as~~~~~~~-----------------~~aL~~m~~~g~~v~tt 228 (235)
T 2wt9_A 174 GIATDFCVA---WTALDAVKQGF-----KTLVIEDACKGIDLNGSL-----------------EQAWQTMQQQGVVRIQS 228 (235)
T ss_dssp EECTTTHHH---HHHHHHHHTTC-----EEEEEEEEEECCCSTTHH-----------------HHHHHHHHHTTCEEECH
T ss_pred EeCccHHHH---HHHHHHHhCCC-----EEEEechhccCCChhHHH-----------------HHHHHHHHHcCCEEEEH
Confidence 999999999 99999999999 9999999999998 5544 56788889999999998
Q ss_pred cccc
Q 025879 239 VSFG 242 (247)
Q Consensus 239 ~~~~ 242 (247)
+++.
T Consensus 229 ~~vl 232 (235)
T 2wt9_A 229 TDLL 232 (235)
T ss_dssp HHHC
T ss_pred HHHH
Confidence 8763
No 17
>3ot4_A Putative isochorismatase; NICF, maleamate hydrolase, hydrol; 2.40A {Bordetella bronchiseptica} PDB: 3uao_A
Probab=100.00 E-value=1.2e-37 Score=272.22 Aligned_cols=180 Identities=23% Similarity=0.316 Sum_probs=154.1
Q ss_pred cCCCCceEEEEEecccccccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHhCCCcEEEEeecCCCCCCCC-CC----C--
Q 025879 24 LSGDVKTGLVLVDVVNGFCTVGSGNLAPSQPDGQISEMVDESVRLARVFCEKKWPVFAFLDTHYPDVPEP-PY----P-- 96 (247)
Q Consensus 24 ~~~~~~tALvvID~Qn~F~~~~~g~l~~~~~~~~~~~il~~i~~l~~~ar~~g~pVi~~~~~h~~~~~~~-~w----p-- 96 (247)
+..+.++|||||||||+|++++ +.+ .. ..+++++++++|++.||..|+||||+++.|+++..+. .| |
T Consensus 39 ~~~~~~tALlVID~Qn~f~~~~-~~~-~~----~~~~vv~~i~~Ll~~aR~~g~pVI~t~~~~~~~~~~~~~~~~~~~~~ 112 (236)
T 3ot4_A 39 LPLKAPYGLLIVDFVNGFADPA-QFG-GG----NIAAAIETTRTVLAAARERGWAVAHSRIVYADDDADGNIFSIKVPGM 112 (236)
T ss_dssp CCCCSSEEEEEECCBHHHHSTT-TSC-CS----SHHHHHHHHHHHHHHHHHHTCEEEEEEECBCTTCTTCCHHHHHSGGG
T ss_pred CCCCCCeEEEEEeCchhhcCCC-Ccc-cc----CHHHHHHHHHHHHHHHHHcCCeEEEEEeccCCCccccchhhhcCCcc
Confidence 3346899999999999999863 222 11 2468999999999999999999999999887765442 23 3
Q ss_pred CCccCCCCCCccccccccccCCcceEEEecCCcccccccccCCCcchHHHHHHhCCCCEEEEEeeecCcccccchhhHHH
Q 025879 97 PHCISGTDESNLVPELQWLENETNVTLRRKDCIDGFLGSVEKDGSNVFVNWVKSNQIKNVLVLGICTDVCVLDFVCSTLS 176 (247)
Q Consensus 97 ~~~~~gt~g~~l~~~l~~~~~~~~~~vv~K~~~saF~~t~~~~~~t~L~~~L~~~~i~~lvi~G~~Td~CV~~~~~Ta~~ 176 (247)
.+|.+||+|++++++|+|.+++ .++.|++||+|++ |+|..+|+++|+++|+|||++|++||. +|+++
T Consensus 113 ~~~~~gt~g~ei~~eL~p~~~d---~vi~K~~~saF~~-------t~L~~~L~~~gi~~lvi~G~~T~~CV~---~Ta~d 179 (236)
T 3ot4_A 113 LTLKEHAPASAIVPQLAPQAGE---YVVRKSTPSAFYG-------TMLAAWLAQRGVQTLLVAGATTSGCVR---ASVVD 179 (236)
T ss_dssp TTCBTTCGGGSBCGGGCCCTTC---EEEEESSSSTTTT-------SSHHHHHHHTTCCEEEEEESCTTTHHH---HHHHH
T ss_pred ccccCCCCccccCHhhcccCCc---eEEECCccCcccC-------chHHHHHHHCCCCEEEEeCccCcHHHH---HHHHH
Confidence 6999999999999999998754 7899999999999 599999999999999999999999999 99999
Q ss_pred HHHCCCCCCCCcEEEecCCCccCCcchhhhhcccccCCCchhhHHHHHHHHHhhCCcEEeecccc-ccC
Q 025879 177 ARNRGFLAPLEDVIVYSRGCATYDFPVHVAKNIKDALPHPQDLMHHIGLFIAKGRGAKVVSGVSF-GAL 244 (247)
Q Consensus 177 A~~~Gy~~~~~~ViVv~Da~as~~~~~h~a~~~~~~~~~~~~~~~~~~l~~~~~~~a~v~~~~~~-~~~ 244 (247)
|.++|| +|+|++|||++++.+.| ..++..|...|+.|++++++ .+|
T Consensus 180 a~~~Gy-----~V~vv~Da~as~~~~~h-----------------~~aL~~m~~~~a~v~tt~evl~~L 226 (236)
T 3ot4_A 180 AMSAGF-----RPLVLSDCVGDRALGPH-----------------EANLFDMRQKYAAVMTHDEALAKT 226 (236)
T ss_dssp HHHHTC-----EEEEEEEEECCSCHHHH-----------------HHHHHHHHHHTSEEECHHHHHC--
T ss_pred HHHCCC-----EEEEechhcCCCCHHHH-----------------HHHHHHHHhcCCEEeeHHHHHHHH
Confidence 999999 99999999999887654 66788889999999998887 444
No 18
>1j2r_A Hypothetical isochorismatase family protein YECD; parallel beta-sheet 3-2-1-4-5-6, alpha-beta-alpha motif, TET structural genomics; 1.30A {Escherichia coli} SCOP: c.33.1.3
Probab=100.00 E-value=4.8e-37 Score=260.64 Aligned_cols=173 Identities=21% Similarity=0.268 Sum_probs=146.3
Q ss_pred CCceEEEEEecccccccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHhCCCcEEEEeecCCCCCC-------CCCCCCCc
Q 025879 27 DVKTGLVLVDVVNGFCTVGSGNLAPSQPDGQISEMVDESVRLARVFCEKKWPVFAFLDTHYPDVP-------EPPYPPHC 99 (247)
Q Consensus 27 ~~~tALvvID~Qn~F~~~~~g~l~~~~~~~~~~~il~~i~~l~~~ar~~g~pVi~~~~~h~~~~~-------~~~wp~~~ 99 (247)
++++|||||||||+|++++ + ... ...++++++++|++.||..|+||||+++.|.++.. ...||.||
T Consensus 17 ~~~~ALlvID~Q~~f~~~~-~--~~~----~~~~~i~~i~~ll~~ar~~g~pVi~t~~~~~~~~~~~~~~~~~~~~~~~~ 89 (199)
T 1j2r_A 17 AKTTALVVIDLQEGILPFA-G--GPH----TADEVVNRAGKLAAKFRASGQPVFLVRVGWSADYAEALKQPVDAPSPAKV 89 (199)
T ss_dssp GGGEEEEEECCSTTTGGGC-C--BSS----CHHHHHHHHHHHHHHHHHTTCCEEEEEECCCTTCTTSCCCCCSSCCCCCC
T ss_pred CCCeEEEEEecchhhhCCC-c--ccc----cHHHHHHHHHHHHHHHHHcCCcEEEEEeeeCCCccccccCcccccCCCcC
Confidence 6789999999999999853 1 111 23579999999999999999999999943444322 23588888
Q ss_pred cCCCCCCccccccccccCCcceEEEecCCcccccccccCCCcchHHHHHHhCCCCEEEEEeeecCcccccchhhHHHHHH
Q 025879 100 ISGTDESNLVPELQWLENETNVTLRRKDCIDGFLGSVEKDGSNVFVNWVKSNQIKNVLVLGICTDVCVLDFVCSTLSARN 179 (247)
Q Consensus 100 ~~gt~g~~l~~~l~~~~~~~~~~vv~K~~~saF~~t~~~~~~t~L~~~L~~~~i~~lvi~G~~Td~CV~~~~~Ta~~A~~ 179 (247)
..+++ ++++++|.+.+++ .++.|++||+|++ |+|+.+|+++|+++|+|||++||+||+ +|+++|.+
T Consensus 90 ~~~~~-~~~~~~l~~~~~~---~vi~K~~~saF~~-------t~L~~~L~~~gi~~lvi~G~~T~~CV~---~Ta~da~~ 155 (199)
T 1j2r_A 90 LPENW-WQHPAALGTTDSD---IEIIKRQWGAFYG-------TDLELQLRRRGIDTIVLCGISTNIGVE---STARNAWE 155 (199)
T ss_dssp CCTTT-TCCCGGGCCCTTS---EEEEESSSSSSTT-------SSHHHHHHHTTCCEEEEEEECTTTHHH---HHHHHHHH
T ss_pred cCCCh-hHhChhhCCCCCC---EEEeCCCcCCcCC-------CCHHHHHHHCCCCEEEEEeeeccHHHH---HHHHHHHH
Confidence 76654 4999999987654 7899999999999 599999999999999999999999999 99999999
Q ss_pred CCCCCCCCcEEEecCCCccCCcchhhhhcccccCCCchhhHHHHHHHHHhhCCcEEeeccccc
Q 025879 180 RGFLAPLEDVIVYSRGCATYDFPVHVAKNIKDALPHPQDLMHHIGLFIAKGRGAKVVSGVSFG 242 (247)
Q Consensus 180 ~Gy~~~~~~ViVv~Da~as~~~~~h~a~~~~~~~~~~~~~~~~~~l~~~~~~~a~v~~~~~~~ 242 (247)
+|| +|+|++|||++++.+.| +.+|..+...|+.|++++++.
T Consensus 156 ~Gy-----~v~vv~Da~as~~~~~h-----------------~~al~~~~~~~~~v~~t~~~l 196 (199)
T 1j2r_A 156 LGF-----NLVIAEDACSAASAEQH-----------------NNSINHIYPRIARVRSVEEIL 196 (199)
T ss_dssp TTC-----EEEEEEEEEEBSSHHHH-----------------HHHHHHTHHHHSEEECHHHHH
T ss_pred CCC-----EEEEehhhcCCCCHHHH-----------------HHHHHHHHHheeEEeeHHHHH
Confidence 999 99999999999987644 667888888899999988763
No 19
>3oqp_A Putative isochorismatase; catalytic triad, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; 1.22A {Burkholderia xenovorans}
Probab=100.00 E-value=4.2e-37 Score=264.48 Aligned_cols=180 Identities=17% Similarity=0.228 Sum_probs=155.3
Q ss_pred CCceEEEEEecccccccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHhCCCcEEEEeecCCCCCCCCCCCCCccCCCCCC
Q 025879 27 DVKTGLVLVDVVNGFCTVGSGNLAPSQPDGQISEMVDESVRLARVFCEKKWPVFAFLDTHYPDVPEPPYPPHCISGTDES 106 (247)
Q Consensus 27 ~~~tALvvID~Qn~F~~~~~g~l~~~~~~~~~~~il~~i~~l~~~ar~~g~pVi~~~~~h~~~~~~~~wp~~~~~gt~g~ 106 (247)
+.++|||||||||+|+++ .++... +..+.+++++++|++.||..|+||||++++|+.+.+ +|..|++|+
T Consensus 4 ~~~tALlvID~Q~~f~~~---~~~~~~--~~~~~~i~~i~~Ll~~ar~~g~pVi~t~~~~p~~~~------~~~~gs~g~ 72 (211)
T 3oqp_A 4 TPRRALIVIDVQNEYVTG---DLPIEY--PDVQSSLANIARAMDAARAAGVPVVIVQNFAPAGSP------LFARGSNGA 72 (211)
T ss_dssp CCCEEEEEECCBGGGTTS---SSCCCB--SCHHHHHHHHHHHHHHHHHHTCCEEEEEECBCTTCS------SSBTTSGGG
T ss_pred CCCEEEEEEcCCHhhcCC---ccccCC--cCHHHHHHHHHHHHHHHHHCCCeEEEEEecCCCCCc------cccCCCCcc
Confidence 568999999999999973 343211 134689999999999999999999999987655432 467899999
Q ss_pred ccccccccccCCcceEEEecCCcccccccccCCCcchHHHHHHhCCCCEEEEEeeecCcccccchhhHHHHHHCCCCCCC
Q 025879 107 NLVPELQWLENETNVTLRRKDCIDGFLGSVEKDGSNVFVNWVKSNQIKNVLVLGICTDVCVLDFVCSTLSARNRGFLAPL 186 (247)
Q Consensus 107 ~l~~~l~~~~~~~~~~vv~K~~~saF~~t~~~~~~t~L~~~L~~~~i~~lvi~G~~Td~CV~~~~~Ta~~A~~~Gy~~~~ 186 (247)
+++++|.+.+++ .++.|++||+|++ |+|+.+|+++|+++|+|||++||+||. +|+++|+++||
T Consensus 73 ~i~~~l~~~~~d---~vi~K~~~saF~~-------t~L~~~L~~~gi~~lvi~G~~T~~CV~---~Ta~dA~~~Gy---- 135 (211)
T 3oqp_A 73 ELHPVVSERARD---HYVEKSLPSAFTG-------TDLAGWLAARQIDTLTVTGYMTHNCDA---STINHAVHSGL---- 135 (211)
T ss_dssp SBCHHHHTSCCS---EEEEESSSCSSTT-------SSHHHHHHTTTCCEEEEEEECTTTHHH---HHHHHHHHTTC----
T ss_pred ccccccCCCCCc---EEEECCccCCCcc-------cHHHHHHHhCCCCEEEEEeeccCHHHH---HHHHHHHHCCC----
Confidence 999999998654 7999999999999 599999999999999999999999999 99999999999
Q ss_pred CcEEEecCCCccCCcchhhhhcccccCCCchhhHHHHHHHHHhhCCcEEeeccccc
Q 025879 187 EDVIVYSRGCATYDFPVHVAKNIKDALPHPQDLMHHIGLFIAKGRGAKVVSGVSFG 242 (247)
Q Consensus 187 ~~ViVv~Da~as~~~~~h~a~~~~~~~~~~~~~~~~~~l~~~~~~~a~v~~~~~~~ 242 (247)
+|+|++|||++++.+.+.. . .+.+++|...+..+..+++.|++++++.
T Consensus 136 -~V~vv~Da~as~~~~~~~g-----~--~~a~~~h~~~l~~l~~~~a~V~tt~e~l 183 (211)
T 3oqp_A 136 -AVEFLHDATGSVPYENSAG-----F--ASAEEIHRVFSVVLQSRFAAVASTDEWI 183 (211)
T ss_dssp -EEEEEEEEEEBCCEEETTE-----E--ECHHHHHHHHHHHHHHHTCEEECHHHHH
T ss_pred -eEEEechheeccccccccC-----C--CCHHHHHHHHHHHHHhccEEEeEHHHHH
Confidence 9999999999999876522 1 1678899999999999999999988873
No 20
>2a67_A Isochorismatase family protein; structural genomics, PSI, protein structure initiative, MIDW center for structural genomics, MCSG; 2.00A {Enterococcus faecalis}
Probab=100.00 E-value=1.1e-36 Score=252.43 Aligned_cols=165 Identities=16% Similarity=0.204 Sum_probs=146.1
Q ss_pred CceEEEEEecccccccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHhCCCcEEEEeecCCCCCCCCCCCCCccCCCCCCc
Q 025879 28 VKTGLVLVDVVNGFCTVGSGNLAPSQPDGQISEMVDESVRLARVFCEKKWPVFAFLDTHYPDVPEPPYPPHCISGTDESN 107 (247)
Q Consensus 28 ~~tALvvID~Qn~F~~~~~g~l~~~~~~~~~~~il~~i~~l~~~ar~~g~pVi~~~~~h~~~~~~~~wp~~~~~gt~g~~ 107 (247)
|++|||||||||+|++++ ++.. ..+.+++++++|++.||..|+||||+++.+ ++|..|++|++
T Consensus 3 m~~aLlvID~Q~~f~~~~---~~~~----~~~~~~~~i~~li~~ar~~g~pVi~t~~~~----------~~~~~g~~g~~ 65 (167)
T 2a67_A 3 KNRALLLIDFQKGIESPT---QQLY----RLPAVLDKVNQRIAVYRQHHAPIIFVQHEE----------TELPFGSDSWQ 65 (167)
T ss_dssp SSEEEEEECCBTTSCCSS---CCCT----THHHHHHHHHHHHHHHHHTTCCEEEEEECB----------TTBCTTSTTTS
T ss_pred CCcEEEEEcCcHHhcCCC---Cccc----CHHHHHHHHHHHHHHHHHCCCeEEEEEeCC----------CCccCCCCcce
Confidence 579999999999999852 3322 235789999999999999999999999641 36888999999
Q ss_pred cccccccccCCcceEEEecCCcccccccccCCCcchHHHHHHhCCCCEEEEEeeecCcccccchhhHHHHHHCCCCCCCC
Q 025879 108 LVPELQWLENETNVTLRRKDCIDGFLGSVEKDGSNVFVNWVKSNQIKNVLVLGICTDVCVLDFVCSTLSARNRGFLAPLE 187 (247)
Q Consensus 108 l~~~l~~~~~~~~~~vv~K~~~saF~~t~~~~~~t~L~~~L~~~~i~~lvi~G~~Td~CV~~~~~Ta~~A~~~Gy~~~~~ 187 (247)
++++|.|.+++ .++.|++||+|++ |+|.++|+++|+++|+|||++||+||+ +|+++|.++||
T Consensus 66 i~~~l~~~~~~---~vi~K~~~saF~~-------t~L~~~L~~~gi~~lvv~G~~T~~CV~---~Ta~da~~~Gy----- 127 (167)
T 2a67_A 66 LFEKLDTQPTD---FFIRKTHANAFYQ-------TNLNDLLTEQAVQTLEIAGVQTEFCVD---TTIRMAHGLGY----- 127 (167)
T ss_dssp BCTTSCCCTTS---EEEEESSSSTTTT-------SSHHHHHHHTTCCEEEEEEECTTTHHH---HHHHHHHHHTC-----
T ss_pred echhhCCCCCC---EEEECCCCCCCCC-------CcHHHHHHHCCCCEEEEEecccChHHH---HHHHHHHHCCC-----
Confidence 99999988654 7899999999999 599999999999999999999999999 99999999999
Q ss_pred cEEEecCCCccCCcchhhhhcccccCCCchhhHHHHHHHHHhhCCcEEeec
Q 025879 188 DVIVYSRGCATYDFPVHVAKNIKDALPHPQDLMHHIGLFIAKGRGAKVVSG 238 (247)
Q Consensus 188 ~ViVv~Da~as~~~~~h~a~~~~~~~~~~~~~~~~~~l~~~~~~~a~v~~~ 238 (247)
+|+|++|||++++.+.+ +++.+|...+..+..++|+|.++
T Consensus 128 ~v~v~~Da~~s~~~~~~-----------~a~~~~~~~l~~l~~~~a~v~~t 167 (167)
T 2a67_A 128 TCLMTPKTTSTLDNGHL-----------TAAQIIQHHEAIWAGRFLTFLSL 167 (167)
T ss_dssp EEEECTTCEECCCCSSS-----------CHHHHHHHHHHHHBTTTBEECC-
T ss_pred EEEEechhhcCCCcccC-----------CHHHHHHHHHHHHhccceEEEeC
Confidence 99999999999998754 66788999999999999999863
No 21
>1nba_A N-carbamoylsarcosine amidohydrolase; hydrolase(IN linear amides); 2.00A {Arthrobacter SP} SCOP: c.33.1.3
Probab=100.00 E-value=9.2e-37 Score=270.58 Aligned_cols=177 Identities=16% Similarity=0.187 Sum_probs=151.7
Q ss_pred CCCCceEEEEEecccccccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHhCCCcEEEEeecCCCCC-----CC-C----C
Q 025879 25 SGDVKTGLVLVDVVNGFCTVGSGNLAPSQPDGQISEMVDESVRLARVFCEKKWPVFAFLDTHYPDV-----PE-P----P 94 (247)
Q Consensus 25 ~~~~~tALvvID~Qn~F~~~~~g~l~~~~~~~~~~~il~~i~~l~~~ar~~g~pVi~~~~~h~~~~-----~~-~----~ 94 (247)
+.+.++|||||||||+|++++ |.++.++ ...+++++++|++.||..|+||||++++|.++. .+ . .
T Consensus 40 ~~~~~tALLVIDmQndf~~~~-g~l~~~~----~~~vi~~i~~Ll~~aR~~g~pVI~t~~~~~~~~~~s~l~~~~~~~~~ 114 (264)
T 1nba_A 40 GYGNRPAVIHIDLANAWTQPG-HPFSCPG----METIIPNVQRINEAARAKGVPVFYTTNVYRNRDASSGTNDMGLWYSK 114 (264)
T ss_dssp CCCSSEEEEEESCBHHHHSSS-STTCCSC----HHHHHHHHHHHHHHHHHHTCCEEEEEECBSCCCTTSTTCSCGGGGGT
T ss_pred CCCCCeEEEEEcCcHhHhCCC-cccCCCC----HHHHHHHHHHHHHHHHHcCCEEEEEEeccCCCccccccccccccccc
Confidence 446789999999999999864 5565432 357999999999999999999999999986654 22 2 2
Q ss_pred CCCC-ccCCCCCCccccccccccCCcceEEEecCCcccccccccCCCcchHHHHHHhCCCCEEEEEeeecCcccccchhh
Q 025879 95 YPPH-CISGTDESNLVPELQWLENETNVTLRRKDCIDGFLGSVEKDGSNVFVNWVKSNQIKNVLVLGICTDVCVLDFVCS 173 (247)
Q Consensus 95 wp~~-~~~gt~g~~l~~~l~~~~~~~~~~vv~K~~~saF~~t~~~~~~t~L~~~L~~~~i~~lvi~G~~Td~CV~~~~~T 173 (247)
||.+ |..|++|++++++|.+.+++ .++.|++||+|++ |+|..+|+++||++|+|||++||+||+ +|
T Consensus 115 ~p~~~~~~gt~g~ei~~~L~p~~~d---~vi~K~~~SaF~~-------T~L~~~Lr~~gi~~lvI~Gv~T~~CV~---~T 181 (264)
T 1nba_A 115 IPTETLPADSYWAQIDDRIAPADGE---VVIEKNRASAFPG-------TNLELFLTSNRIDTLIVTGATAAGCVR---HT 181 (264)
T ss_dssp SCGGGCBTTSGGGSBCGGGCCCTTC---EEEEESSSSSSTT-------SSHHHHHHHTTCCEEEEEEECTTTHHH---HH
T ss_pred cccccccCCCCccccccccCCCCCC---EEEeCCcCCCccc-------chHHHHHHhCCCCEEEEEecCcCCHHH---HH
Confidence 4533 67899999999999988654 7899999999999 599999999999999999999999999 99
Q ss_pred HHHHHHCCCCCCCCcEEEecCCCccCCcchhhhhcccccCCCchhhHHHHHHHHHhhCCcEEeecccc
Q 025879 174 TLSARNRGFLAPLEDVIVYSRGCATYDFPVHVAKNIKDALPHPQDLMHHIGLFIAKGRGAKVVSGVSF 241 (247)
Q Consensus 174 a~~A~~~Gy~~~~~~ViVv~Da~as~~~~~h~a~~~~~~~~~~~~~~~~~~l~~~~~~~a~v~~~~~~ 241 (247)
+++|+++|| +|+|++|||++++.+.| +.+|..|...++.|+++.++
T Consensus 182 a~dA~~~Gy-----~V~Vv~DA~as~~~~~h-----------------~~aL~~m~~~~~~vitt~e~ 227 (264)
T 1nba_A 182 VEDAIAKGF-----RPIIPRETIGDRVPGVV-----------------QWNLYDIDNKFGDVESTDSV 227 (264)
T ss_dssp HHHHHHHTC-----EEEEEGGGEECSSSSHH-----------------HHHHHHHHHHTCEEECHHHH
T ss_pred HHHHHHCCC-----EEEEeccccCCCCHHHH-----------------HHHHHHHHhcCcEEeEHHHH
Confidence 999999999 99999999999877544 66788888888899987766
No 22
>2fq1_A Isochorismatase; ENTB, NRPS, multi-domain, ACP, hydrolase; 2.30A {Escherichia coli}
Probab=100.00 E-value=4.1e-37 Score=275.08 Aligned_cols=189 Identities=13% Similarity=0.182 Sum_probs=160.9
Q ss_pred ccCCCCccccccCCCCceEEEEEecccccccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHhCCCcEEEEeecCCCCCCC
Q 025879 13 NELPVEQESLFLSGDVKTGLVLVDVVNGFCTVGSGNLAPSQPDGQISEMVDESVRLARVFCEKKWPVFAFLDTHYPDVPE 92 (247)
Q Consensus 13 ~~~~~~~~~~~~~~~~~tALvvID~Qn~F~~~~~g~l~~~~~~~~~~~il~~i~~l~~~ar~~g~pVi~~~~~h~~~~~~ 92 (247)
.++|.+.-++.++ ++++|||||||||+|+++. .... ....++++++++|++.||..|+||||++++|.++..+
T Consensus 17 ~~~~~~~~~~~l~-~~~~ALlvID~Q~~f~~~~--~~~~----~~~~~~i~~i~~L~~~ar~~g~pVi~t~~~~~~~~~~ 89 (287)
T 2fq1_A 17 HDIPQNKVDWAFE-PQRAALLIHDMQDYFVSFW--GENC----PMMEQVIANIAALRDYCKQHNIPVYYTAQPKEQSDED 89 (287)
T ss_dssp GGSCCCSCCCCCC-GGGEEEEEECCBHHHHTTS--CTTC----HHHHHHHHHHHHHHHHHHHTTCCEEEEECCSCCCHHH
T ss_pred hhcCCCCCCCcCC-CCCEEEEEECCchHhhCcc--cccc----chHHHHHHHHHHHHHHHHHcCCeEEEEeecCCCChhh
Confidence 3466666778886 8899999999999999852 1211 2346899999999999999999999999877543211
Q ss_pred -----CCCCCCccCCCCCCccccccccccCCcceEEEecCCcccccccccCCCcchHHHHHHhCCCCEEEEEeeecCccc
Q 025879 93 -----PPYPPHCISGTDESNLVPELQWLENETNVTLRRKDCIDGFLGSVEKDGSNVFVNWVKSNQIKNVLVLGICTDVCV 167 (247)
Q Consensus 93 -----~~wp~~~~~gt~g~~l~~~l~~~~~~~~~~vv~K~~~saF~~t~~~~~~t~L~~~L~~~~i~~lvi~G~~Td~CV 167 (247)
..|+.+|..|++|++++++|.|.+++ .++.|++||+|++ |+|..+|+++|+++|+|||+.||+||
T Consensus 90 ~~~~~~~~~~~~~~g~~g~ei~~~l~p~~~d---~vi~K~~~saF~~-------t~L~~~L~~~gi~~lvi~Gv~T~~CV 159 (287)
T 2fq1_A 90 RALLNDMWGPGLTRSPEQQKVVDRLTPDADD---TVLVKWRYSAFHR-------SPLEQMLKESGRNQLIITGVYAHIGC 159 (287)
T ss_dssp HTTHHHHHTTGGGGCGGGCSBCGGGCCCTTS---EEEECCSSSTTTT-------SSHHHHHHHTTCCEEEEEEECTTTHH
T ss_pred hhhhhhhccCCCCCCCchhhcccccCCCCCC---EEEeCCccCCcCC-------CcHHHHHHHCCCCEEEEEEeCcchHH
Confidence 24788999999999999999988654 7889999999999 59999999999999999999999999
Q ss_pred ccchhhHHHHHHCCCCCCCCcEEEecCCCccCCcchhhhhcccccCCCchhhHHHHHHHHHhhCCcEEeecccccc
Q 025879 168 LDFVCSTLSARNRGFLAPLEDVIVYSRGCATYDFPVHVAKNIKDALPHPQDLMHHIGLFIAKGRGAKVVSGVSFGA 243 (247)
Q Consensus 168 ~~~~~Ta~~A~~~Gy~~~~~~ViVv~Da~as~~~~~h~a~~~~~~~~~~~~~~~~~~l~~~~~~~a~v~~~~~~~~ 243 (247)
. +|+++|+++|| +|+|++|||++++.+.| +.++..+...|+.|++++++..
T Consensus 160 ~---~Ta~dA~~~Gy-----~V~vv~Da~as~~~~~h-----------------~~al~~m~~~~~~v~~t~~v~~ 210 (287)
T 2fq1_A 160 M---TTATDAFMRDI-----KPFMVADALADFSRDEH-----------------LMSLKYVAGRSGRVVMTEELLP 210 (287)
T ss_dssp H---HHHHHHHHTTC-----EEEEEEEEEECSSHHHH-----------------HHHHHHHHHHTCEEECHHHHSS
T ss_pred H---HHHHHHHHCCC-----EEEEechhccCCCHHHH-----------------HHHHHHHHHhCcEEeeHHHHHh
Confidence 9 99999999999 99999999999988654 6678888899999999887743
No 23
>3txy_A Isochorismatase family protein family; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.70A {Burkholderia thailandensis} SCOP: c.33.1.0
Probab=100.00 E-value=2.6e-36 Score=256.97 Aligned_cols=176 Identities=20% Similarity=0.301 Sum_probs=149.0
Q ss_pred cccCCCCceEEEEEecccccccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHhCCCcEEEEeecCCCCCCC-------CC
Q 025879 22 LFLSGDVKTGLVLVDVVNGFCTVGSGNLAPSQPDGQISEMVDESVRLARVFCEKKWPVFAFLDTHYPDVPE-------PP 94 (247)
Q Consensus 22 ~~~~~~~~tALvvID~Qn~F~~~~~g~l~~~~~~~~~~~il~~i~~l~~~ar~~g~pVi~~~~~h~~~~~~-------~~ 94 (247)
..++ + ++|||||||||+|+.. .+... ..+.+++++++|++.||..|+||||+++.|.+++.+ ..
T Consensus 8 ~~l~-~-~tALlvID~Q~~f~~~---~~~~~----~~~~~i~~i~~Li~~ar~~g~pVi~t~~~~~~d~~~~~~~~~~~~ 78 (199)
T 3txy_A 8 PTLN-P-TVALVAIDLQNGIVVL---PMVPQ----SGGDVVAKTAELANAFRARKLPVIFVHTSYQPDGAVALKVKTDVP 78 (199)
T ss_dssp CCCC-S-SEEEEEECCBHHHHTS---CCBSS----CHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTSTTSCCCCCSSC
T ss_pred cCcC-C-CeEEEEEcCchhhhCC---CcCCC----CHHHHHHHHHHHHHHHHHcCCcEEEEEeeecCCccccccccccCC
Confidence 4565 6 9999999999999983 23222 235899999999999999999999999877765432 23
Q ss_pred CCCCccCCCCCCccccccccccCCcceEEEecCCcccccccccCCCcchHHHHHHhCCCCEEEEEeeecCcccccchhhH
Q 025879 95 YPPHCISGTDESNLVPELQWLENETNVTLRRKDCIDGFLGSVEKDGSNVFVNWVKSNQIKNVLVLGICTDVCVLDFVCST 174 (247)
Q Consensus 95 wp~~~~~gt~g~~l~~~l~~~~~~~~~~vv~K~~~saF~~t~~~~~~t~L~~~L~~~~i~~lvi~G~~Td~CV~~~~~Ta 174 (247)
|+.+|.. +.+++++++|.+.+++ .++.|++||+|++ |+|..+|+++|+++|+|||++||+||. +|+
T Consensus 79 ~~~~~~~-~~~~~i~~~L~~~~~~---~vi~K~~~saf~~-------t~L~~~L~~~gi~~lvi~G~~t~~CV~---~Ta 144 (199)
T 3txy_A 79 PSPPNLD-PEWSAFAPALGVQPLD---VVVTKHQWGAFTG-------TDLDVQLRRRGITDIVLTGIATNIGVE---STA 144 (199)
T ss_dssp CCCCCCC-HHHHSBCGGGCCCTTS---EEEEESSSSSSTT-------SSHHHHHHHTTCCEEEEEEECTTTHHH---HHH
T ss_pred CcccCCC-CcHHhhChhhCCCCCe---EEEECCCcCcccc-------CcHHHHHHhCCCCEEEEEeeccCHHHH---HHH
Confidence 5566653 4468999999998654 7899999999999 599999999999999999999999999 999
Q ss_pred HHHHHCCCCCCCCcEEEecCCCccCCcchhhhhcccccCCCchhhHHHHHHHHHhhCCcEEeeccccc
Q 025879 175 LSARNRGFLAPLEDVIVYSRGCATYDFPVHVAKNIKDALPHPQDLMHHIGLFIAKGRGAKVVSGVSFG 242 (247)
Q Consensus 175 ~~A~~~Gy~~~~~~ViVv~Da~as~~~~~h~a~~~~~~~~~~~~~~~~~~l~~~~~~~a~v~~~~~~~ 242 (247)
++|.++|| +|+|++|||++++.+.| ..++..+...|+.|++++++.
T Consensus 145 ~~a~~~G~-----~v~v~~Da~~~~~~~~~-----------------~~al~~~~~~~~~v~tt~~~l 190 (199)
T 3txy_A 145 REAYENNY-----NVVVVSDAVSTWSTDAQ-----------------TFALTQIFPKLGQVATAADVE 190 (199)
T ss_dssp HHHHHTTC-----EEEEEEEEEEBSCHHHH-----------------HHHHHHTHHHHSEEECHHHHH
T ss_pred HHHHHCCC-----EEEEecHhhcCCCHHHH-----------------HHHHHHHHhhceEEeeHHHHH
Confidence 99999999 99999999999998655 567778888999999988873
No 24
>1yac_A Ycacgp, YCAC gene product; unknown bacterial hydrolase, three layer alpha-beta-alpha SA topology, ENTB homolog, cshase homolog; 1.80A {Escherichia coli} SCOP: c.33.1.3
Probab=99.98 E-value=3.9e-32 Score=232.72 Aligned_cols=157 Identities=22% Similarity=0.300 Sum_probs=132.6
Q ss_pred CCceEEEEEecccccccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHhCCCcEEEEeecCCCCCCCCCCCCCccCCCCCC
Q 025879 27 DVKTGLVLVDVVNGFCTVGSGNLAPSQPDGQISEMVDESVRLARVFCEKKWPVFAFLDTHYPDVPEPPYPPHCISGTDES 106 (247)
Q Consensus 27 ~~~tALvvID~Qn~F~~~~~g~l~~~~~~~~~~~il~~i~~l~~~ar~~g~pVi~~~~~h~~~~~~~~wp~~~~~gt~g~ 106 (247)
++++|||||||||+|+++. ... ....+++++++|++.||..|+||||+++.+. .+++
T Consensus 10 ~~~tALlvID~Q~~f~~~~----~~~----~~~~~i~~i~~l~~~ar~~g~pVi~t~~~~~---------------~~~~ 66 (208)
T 1yac_A 10 KNDAAVLLVDHQAGLLSLV----RDI----EPDKFKNNVLALGDLAKYFNLPTILTTSAET---------------GPNG 66 (208)
T ss_dssp TTSEEEEEECCBTTGGGGC----CSS----CHHHHHHHHHHHHHHHHHTTCCEEEEEESTT---------------TTTC
T ss_pred CCCeEEEEEcCchhhhccc----ccc----cHHHHHHHHHHHHHHHHHcCCcEEEEEecCC---------------CCCC
Confidence 7799999999999999852 111 2357899999999999999999999995321 1355
Q ss_pred ccccccccc-cCCcceEEEecC-CcccccccccCCCcchHHHHHHhCCCCEEEEEeeecCcccccchhhHHHHHHCCCCC
Q 025879 107 NLVPELQWL-ENETNVTLRRKD-CIDGFLGSVEKDGSNVFVNWVKSNQIKNVLVLGICTDVCVLDFVCSTLSARNRGFLA 184 (247)
Q Consensus 107 ~l~~~l~~~-~~~~~~~vv~K~-~~saF~~t~~~~~~t~L~~~L~~~~i~~lvi~G~~Td~CV~~~~~Ta~~A~~~Gy~~ 184 (247)
++++++.+. +++ .++.|. +||+|++ |+|..+|+++|+++|+|||++||+||. +|+++|.++||
T Consensus 67 ~~~~~l~~~~~~~---~vi~K~~~~saF~~-------t~L~~~L~~~gi~~lvi~Gv~T~~CV~---~Ta~dA~~~Gy-- 131 (208)
T 1yac_A 67 PLVPELKAQFPDA---PYIARPGNINAWDN-------EDFVKAVKATGKKQLIIAGVVTEVCVA---FPALSAIEEGF-- 131 (208)
T ss_dssp CBCHHHHHHCTTS---CEEEESSCSSGGGS-------HHHHHHHHHTTCSEEEEEEBSCCCCCH---HHHHHHHHTTC--
T ss_pred cccHHHHhhCCCC---eEEeeCCccCCCCC-------chHHHHHHhcCCCEEEEEEeccchhHH---HHHHHHHHCCC--
Confidence 788888764 433 466766 8999999 599999999999999999999999999 99999999999
Q ss_pred CCCcEEEecCCCccCCcchhhhhcccccCCCchhhHHHHHHHHHhhCCcEEeecccc
Q 025879 185 PLEDVIVYSRGCATYDFPVHVAKNIKDALPHPQDLMHHIGLFIAKGRGAKVVSGVSF 241 (247)
Q Consensus 185 ~~~~ViVv~Da~as~~~~~h~a~~~~~~~~~~~~~~~~~~l~~~~~~~a~v~~~~~~ 241 (247)
+|+|++|||++++.+.| ..++..|...|+.|++++++
T Consensus 132 ---~V~vv~Da~as~~~~~h-----------------~~al~~m~~~g~~v~~t~~~ 168 (208)
T 1yac_A 132 ---DVFVVTDASGTFNEITR-----------------HSAWDRMSQAGAQLMTWFGV 168 (208)
T ss_dssp ---EEEEETTSCBCSSHHHH-----------------HHHHHHHHHHTCEEECHHHH
T ss_pred ---EEEEECcccCCCCHHHH-----------------HHHHHHHHHcCCEEeeHHHH
Confidence 99999999999988654 66788888999999997665
No 25
>1yzv_A Hypothetical protein; structural genomics, PSI, protein structure initiative, STRU genomics of pathogenic protozoa consortium, SGPP; 2.00A {Trypanosoma cruzi}
Probab=99.97 E-value=8.5e-32 Score=230.29 Aligned_cols=166 Identities=16% Similarity=0.195 Sum_probs=136.9
Q ss_pred CCccccccCCCCceEEEEEecccccccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHhCCCc---EEEEeecCCCCCCCC
Q 025879 17 VEQESLFLSGDVKTGLVLVDVVNGFCTVGSGNLAPSQPDGQISEMVDESVRLARVFCEKKWP---VFAFLDTHYPDVPEP 93 (247)
Q Consensus 17 ~~~~~~~~~~~~~tALvvID~Qn~F~~~~~g~l~~~~~~~~~~~il~~i~~l~~~ar~~g~p---Vi~~~~~h~~~~~~~ 93 (247)
++.....++ ++++|||||||||+|++. .+ ...++++++++|++.||..|+| ||+++++++.
T Consensus 9 ~~~~~~~~~-~~~tALlvID~Q~~f~~~----~~------~~~~vi~~i~~Ll~~ar~~g~p~~~Vi~t~~~~~~----- 72 (204)
T 1yzv_A 9 MSRLLKHYG-SCKTAFFCCDIQEKFMGR----IA------NSANCVFVANRFAGLHTALGTAHSVYIVTEQYPKG----- 72 (204)
T ss_dssp -CCSCCCTT-TSEEEEEEECCBHHHHTT----ST------THHHHHHHHHHHHHHHHHHCTTTEEEEEEEESHHH-----
T ss_pred hccccccCC-CCCeEEEEEcCHhHhhhc----cC------CHHHHHHHHHHHHHHHHHcCCCcceEEEEEecCCc-----
Confidence 344455665 778999999999999972 21 2357899999999999999999 9999754321
Q ss_pred CCCCCccCCCCCCccccccccccCCcceEEEecCCcccccccccCCCcchHHHHHHhCCCCEEEEEeeecCcccccchhh
Q 025879 94 PYPPHCISGTDESNLVPELQWLENETNVTLRRKDCIDGFLGSVEKDGSNVFVNWVKSNQIKNVLVLGICTDVCVLDFVCS 173 (247)
Q Consensus 94 ~wp~~~~~gt~g~~l~~~l~~~~~~~~~~vv~K~~~saF~~t~~~~~~t~L~~~L~~~~i~~lvi~G~~Td~CV~~~~~T 173 (247)
.| .++++|.+.+++ .++.|++||+|++ +|..+|+++|+++|+|||++||+||. +|
T Consensus 73 -------~G----~~~~eL~~~~~d---~vi~K~~~SaF~~--------~L~~~L~~~gi~~lvi~Gv~T~~CV~---~T 127 (204)
T 1yzv_A 73 -------LG----ATSADIRLPPDA---HVFSKKRFAMLVP--------QVMPLVDLPEVEQVVLWGFETHVCIL---QT 127 (204)
T ss_dssp -------HC----SBCTTSCCCTTC---EEEEESSSSSCCT--------TTHHHHSSTTEEEEEEEEECTTTHHH---HH
T ss_pred -------CC----CChHHhcCCCCC---EEEECCcCCCchh--------HHHHHHHhCCCCEEEEEEeccCHHHH---HH
Confidence 02 277888887653 7899999999986 79999999999999999999999999 99
Q ss_pred HHHHHHCCCCCCCCcEEEecCCCccCCcchhhhhcccccCCCchhhHHHHHHHHHh---hCCcEEeeccc--cccCC
Q 025879 174 TLSARNRGFLAPLEDVIVYSRGCATYDFPVHVAKNIKDALPHPQDLMHHIGLFIAK---GRGAKVVSGVS--FGALK 245 (247)
Q Consensus 174 a~~A~~~Gy~~~~~~ViVv~Da~as~~~~~h~a~~~~~~~~~~~~~~~~~~l~~~~---~~~a~v~~~~~--~~~~~ 245 (247)
+++|.++|| +|+|++|||++++.+.| ..++..|. ..|+.|+++++ |.||.
T Consensus 128 a~dA~~~Gy-----~V~vv~Da~as~~~~~h-----------------~~aL~~m~~~~~~g~~v~t~e~vl~~ll~ 182 (204)
T 1yzv_A 128 AAALLDMKK-----KVVIAVDGCGSQSQGDH-----------------CTAIQLMQSWSGDGCYISTSESILMQLLK 182 (204)
T ss_dssp HHHHHHTTC-----EEEEEEEEEECSSHHHH-----------------HHHHHHHHTTGGGTEEEECHHHHHHHHHC
T ss_pred HHHHHHCCC-----EEEEECCccCCCCHHHH-----------------HHHHHHHHHHhcCCeEEeCHHHHHHHHHH
Confidence 999999999 99999999999988655 56777787 88999998774 45554
No 26
>2b34_A F35G2.2, MAR1 ribonuclease; isochorismatase family, structural genomics, PSI, protein structure initiative; 2.14A {Caenorhabditis elegans}
Probab=99.97 E-value=1.4e-31 Score=228.02 Aligned_cols=153 Identities=19% Similarity=0.232 Sum_probs=130.8
Q ss_pred CCceEEEEEecccccccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHhCCCcEEEEeecCCCCCCCCCCCCCccCCCCCC
Q 025879 27 DVKTGLVLVDVVNGFCTVGSGNLAPSQPDGQISEMVDESVRLARVFCEKKWPVFAFLDTHYPDVPEPPYPPHCISGTDES 106 (247)
Q Consensus 27 ~~~tALvvID~Qn~F~~~~~g~l~~~~~~~~~~~il~~i~~l~~~ar~~g~pVi~~~~~h~~~~~~~~wp~~~~~gt~g~ 106 (247)
++++|||||||||+|+++ .+ ....+++++++|++.||..|+||||+++++.. .|++++
T Consensus 12 ~~~~ALlvID~Q~~f~~~----~~------~~~~~i~~i~~l~~~ar~~g~pVi~t~~~~~~------------~g~~~~ 69 (199)
T 2b34_A 12 PTNSALFVCDLQEKFASN----IK------YFPEIITTSRRLIDAARILSIPTIVTEQYPKG------------LGHTVP 69 (199)
T ss_dssp TTTEEEEEECCBGGGTTS----ST------THHHHHHHHHHHHHHHHHTTCCEEEEEESHHH------------HCCBCH
T ss_pred CCCEEEEEEeCHhHHhhh----cC------CHHHHHHHHHHHHHHHHHCCCcEEEEEecCCC------------CCCChH
Confidence 678999999999999973 21 23579999999999999999999999864210 267788
Q ss_pred ccccccccccCCcceEEEecCCcccccccccCCCcchHHHHHHhCCCCEEEEEeeecCcccccchhhHHHHHHCCCCCCC
Q 025879 107 NLVPELQWLENETNVTLRRKDCIDGFLGSVEKDGSNVFVNWVKSNQIKNVLVLGICTDVCVLDFVCSTLSARNRGFLAPL 186 (247)
Q Consensus 107 ~l~~~l~~~~~~~~~~vv~K~~~saF~~t~~~~~~t~L~~~L~~~~i~~lvi~G~~Td~CV~~~~~Ta~~A~~~Gy~~~~ 186 (247)
+|.+++ | +. +.++.|++||+|++ + |..+|++ +++|+|||++||+||. +|+++|.++||
T Consensus 70 el~~~l-~--~~--~~vi~K~~~saF~~-------t-L~~~L~~--i~~lvi~G~~T~~CV~---~Ta~da~~~Gy---- 127 (199)
T 2b34_A 70 TLKEGL-A--EN--TPIFDKTKFSMCIP-------P-TEDTLKK--VQNVILVGIEAHVCVL---QTTYDLLERGL---- 127 (199)
T ss_dssp HHHHHS-C--TT--CCEEEESBSSSCCG-------G-GHHHHTT--CSEEEEEEECTTTHHH---HHHHHHHHTTC----
T ss_pred HHHhhC-C--CC--CeeeecCccCCccc-------H-HHHHHcC--CCEEEEEEEecCHHHH---HHHHHHHHCCC----
Confidence 888877 2 21 26889999999987 6 9999988 9999999999999999 99999999999
Q ss_pred CcEEEecCCCccCCcchhhhhcccccCCCchhhHHHHHHHHHhhCCcEEeecccc
Q 025879 187 EDVIVYSRGCATYDFPVHVAKNIKDALPHPQDLMHHIGLFIAKGRGAKVVSGVSF 241 (247)
Q Consensus 187 ~~ViVv~Da~as~~~~~h~a~~~~~~~~~~~~~~~~~~l~~~~~~~a~v~~~~~~ 241 (247)
+|+|++|||++++.+.| +.++..+...|+.|++++++
T Consensus 128 -~V~vv~Da~as~~~~~h-----------------~~al~~m~~~g~~v~~t~~~ 164 (199)
T 2b34_A 128 -NVHVVVDAVSSRSHTDR-----------------HFAFKQMEQAGAILTTSEAT 164 (199)
T ss_dssp -EEEEEEEEEECSSHHHH-----------------HHHHHHHHHHTCEEECHHHH
T ss_pred -EEEEeCcccCCCCHHHH-----------------HHHHHHHHHCCCEEecHHHH
Confidence 99999999999998654 66788888899999998765
No 27
>1x9g_A Putative MAR1; structural genomics, protein structure initiative, SGPP, PSI structural genomics of pathogenic protozoa consortium; 2.41A {Leishmania donovani} SCOP: c.33.1.3 PDB: 1xn4_A
Probab=99.97 E-value=1.5e-30 Score=221.91 Aligned_cols=159 Identities=18% Similarity=0.202 Sum_probs=131.6
Q ss_pred cccCCCCceEEEEEecccccccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHhCC--CcEEEEeecCCCCCCCCCCCCCc
Q 025879 22 LFLSGDVKTGLVLVDVVNGFCTVGSGNLAPSQPDGQISEMVDESVRLARVFCEKK--WPVFAFLDTHYPDVPEPPYPPHC 99 (247)
Q Consensus 22 ~~~~~~~~tALvvID~Qn~F~~~~~g~l~~~~~~~~~~~il~~i~~l~~~ar~~g--~pVi~~~~~h~~~~~~~~wp~~~ 99 (247)
..+. ++++|||||||||+|++. .+ ....+++++++|++.||..| +||||+++++.. |
T Consensus 14 ~~~~-~~~tALlvID~Q~~f~~~----~~------~~~~vi~~i~~ll~~ar~~g~~~pVi~t~~~~~~------~---- 72 (200)
T 1x9g_A 14 PHYS-KGKTAFLCVDLQEAFSKR----IE------NFANCVFVANRLARLHEVVPENTKYIVTEHYPKG------L---- 72 (200)
T ss_dssp CCTT-SSCEEEEEECCBTTTTTT----ST------THHHHHHHHHHHHHHHHHSTTSEEEEEEEESCSS------S----
T ss_pred hccC-CCCEEEEEECChHHHhhc----cC------CHHHHHHHHHHHHHHHHHhCCCceEEEEeecCCc------c----
Confidence 4444 778999999999999972 21 23578999999999999999 999999864211 1
Q ss_pred cCCCCCCccccccccccCCcceEEEecCCcccccccccCCCcchHHHHHHhCCCCEEEEEeeecCcccccchhhHHHHHH
Q 025879 100 ISGTDESNLVPELQWLENETNVTLRRKDCIDGFLGSVEKDGSNVFVNWVKSNQIKNVLVLGICTDVCVLDFVCSTLSARN 179 (247)
Q Consensus 100 ~~gt~g~~l~~~l~~~~~~~~~~vv~K~~~saF~~t~~~~~~t~L~~~L~~~~i~~lvi~G~~Td~CV~~~~~Ta~~A~~ 179 (247)
| +++++|. .++. +.++.|++||+|++ +|+++|+ |+++|+|||++||+||. +|+++|.+
T Consensus 73 -----G-~~~~eL~-~~~~--~~vi~K~~~SaF~~--------~L~~~L~--gi~~lvi~Gv~T~~CV~---~Ta~dA~~ 130 (200)
T 1x9g_A 73 -----G-RIVPEIT-LPKT--AHLIEKTRFSCVVP--------QVEELLE--DVDNAVVFGIEGHACIL---QTVADLLD 130 (200)
T ss_dssp -----C-CBCTTSC-CCTT--CEEEEESSSSSCCH--------HHHHTTT--TCCEEEEEEECTTTHHH---HHHHHHHH
T ss_pred -----C-ccCHHHh-CCCC--CeEEeCCCCCCchh--------hHHHHhC--CCCEEEEEEEecCcHHH---HHHHHHHh
Confidence 2 4677787 5431 37899999999986 8999998 99999999999999999 99999999
Q ss_pred CCCCCCCCcEEEecCCCccCCcchhhhhcccccCCCchhhHHHHHHHHHh--hCCcEEeecccc--ccCC
Q 025879 180 RGFLAPLEDVIVYSRGCATYDFPVHVAKNIKDALPHPQDLMHHIGLFIAK--GRGAKVVSGVSF--GALK 245 (247)
Q Consensus 180 ~Gy~~~~~~ViVv~Da~as~~~~~h~a~~~~~~~~~~~~~~~~~~l~~~~--~~~a~v~~~~~~--~~~~ 245 (247)
+|| +|+|++|||++++.+.| ..++..+. ..|+.|++++++ .||.
T Consensus 131 ~Gy-----~V~Vv~Da~as~~~~~h-----------------~~aL~~m~~~~~g~~v~tte~vl~~l~~ 178 (200)
T 1x9g_A 131 MNK-----RVFLPKDGLGSQKKTDF-----------------KAAIKLMSSWGPNCEITTSESILLQMTK 178 (200)
T ss_dssp TTC-----EEEEEGGGEECSSHHHH-----------------HHHHHHHHTSCSSEEEECHHHHHHHHSC
T ss_pred CCC-----EEEEeCCCcCCCCHHHH-----------------HHHHHHHHhhCCCeEEecHHHHHHHHHH
Confidence 999 99999999999997654 66788888 899999998764 5554
No 28
>1j0a_A 1-aminocyclopropane-1-carboxylate deaminase; PLP dependent, lyase; HET: PLP; 2.50A {Pyrococcus horikoshii} SCOP: c.79.1.1 PDB: 1j0b_A*
Probab=53.30 E-value=23 Score=30.72 Aligned_cols=40 Identities=25% Similarity=0.431 Sum_probs=31.3
Q ss_pred HhCCCCEEEEEe-eecCcccccchhhHHHHHHCCCCCCCCcEEEecCCCc
Q 025879 149 KSNQIKNVLVLG-ICTDVCVLDFVCSTLSARNRGFLAPLEDVIVYSRGCA 197 (247)
Q Consensus 149 ~~~~i~~lvi~G-~~Td~CV~~~~~Ta~~A~~~Gy~~~~~~ViVv~Da~a 197 (247)
+++|.++|+-+| ...|.++. .|.-|..+|+ +++++.....
T Consensus 66 ~~~G~~~vv~~G~ssGN~g~a----lA~~a~~~G~-----~~~iv~p~~~ 106 (325)
T 1j0a_A 66 LSKGADVVITVGAVHSNHAFV----TGLAAKKLGL-----DAILVLRGKE 106 (325)
T ss_dssp HHTTCSEEEEECCTTCHHHHH----HHHHHHHTTC-----EEEEEEESCC
T ss_pred HHcCCCEEEEcCCcchHHHHH----HHHHHHHhCC-----cEEEEECCCC
Confidence 357899999885 77777776 8999999999 8877665433
No 29
>1f2d_A 1-aminocyclopropane-1-carboxylate deaminase; carbon-carbon L open twisted alpha/beta, lyase; HET: PLP; 2.00A {Williopsis saturnus} SCOP: c.79.1.1 PDB: 1j0e_A* 1j0d_A* 1j0c_A*
Probab=41.27 E-value=53 Score=28.58 Aligned_cols=42 Identities=7% Similarity=0.143 Sum_probs=30.9
Q ss_pred HHhCCCCEEEEEe-eecCcccccchhhHHHHHHCCCCCCCCcEEEecCCCcc
Q 025879 148 VKSNQIKNVLVLG-ICTDVCVLDFVCSTLSARNRGFLAPLEDVIVYSRGCAT 198 (247)
Q Consensus 148 L~~~~i~~lvi~G-~~Td~CV~~~~~Ta~~A~~~Gy~~~~~~ViVv~Da~as 198 (247)
+.+.|.++|+-+| ..+|.|+. +|.-|..+|+ +++++.....+
T Consensus 62 a~~~g~~~vv~~G~ssGN~g~a----lA~~a~~~G~-----~~~iv~p~~~~ 104 (341)
T 1f2d_A 62 IVEGDYTHLVSIGGRQSNQTRM----VAALAAKLGK-----KCVLIQEDWVP 104 (341)
T ss_dssp HHHSCCSEEEEEEETTCHHHHH----HHHHHHHHTC-----EEEEEEECCSC
T ss_pred HHHcCCCEEEEcCCcchHHHHH----HHHHHHHhCC-----ceEEEeccCCC
Confidence 3467889888776 55566665 8999999999 88877655443
No 30
>3h7i_A Ribonuclease H, RNAse H; BPT4 RNAse H, 5'-3' exonuclease, hydrolase, endonuclease; 1.50A {Enterobacteria phage T4} PDB: 2ihn_A 3h8w_A 3h8j_A 1tfr_A 3h8s_A
Probab=36.30 E-value=14 Score=32.66 Aligned_cols=43 Identities=7% Similarity=-0.067 Sum_probs=38.8
Q ss_pred hHHHHHHhCCCCEEEEEeeecCcccccchhhHHHHHHCCCCCCCCcEEEec
Q 025879 143 VFVNWVKSNQIKNVLVLGICTDVCVLDFVCSTLSARNRGFLAPLEDVIVYS 193 (247)
Q Consensus 143 ~L~~~L~~~~i~~lvi~G~~Td~CV~~~~~Ta~~A~~~Gy~~~~~~ViVv~ 193 (247)
-+.++|++.|+..+.+-|...|=++. +=|+.|...|+ +|+|++
T Consensus 111 ~ike~l~a~gi~~l~~~G~EADDiIg---TLA~~a~~~g~-----~V~IvS 153 (305)
T 3h7i_A 111 VIDELKAYMPYIVMDIDKYEANDHIA---VLVKKFSLEGH-----KILIIS 153 (305)
T ss_dssp HHHHHHHHSSSEEECCTTCCHHHHHH---HHHHHHHHTTC-----CEEEEC
T ss_pred HHHHHHHHCCCCEEccCCccHHHHHH---HHHHHHHHCCC-----cEEEEe
Confidence 46778889999999999999999999 77899999999 999986
No 31
>4d9b_A D-cysteine desulfhydrase; fold type II PLP-dependent enzyme or tryptophan synthase BET like family, PLP dependent enzyme, lyase; HET: PMP; 1.67A {Salmonella typhimurium} PDB: 4d96_A* 4d9c_A* 4d9e_A* 4d9f_A* 4d97_A* 4d8w_A* 4d8u_A* 4d8t_A* 4d92_A* 4d99_A*
Probab=35.39 E-value=60 Score=28.36 Aligned_cols=41 Identities=10% Similarity=0.114 Sum_probs=32.7
Q ss_pred HhCCCCEEEEEe-eecCcccccchhhHHHHHHCCCCCCCCcEEEecCCCcc
Q 025879 149 KSNQIKNVLVLG-ICTDVCVLDFVCSTLSARNRGFLAPLEDVIVYSRGCAT 198 (247)
Q Consensus 149 ~~~~i~~lvi~G-~~Td~CV~~~~~Ta~~A~~~Gy~~~~~~ViVv~Da~as 198 (247)
+++|.++|+-+| ..+|.++. .|.-|..+|+ +++++.....+
T Consensus 77 ~~~G~~~vv~~s~tsGN~g~a----lA~aa~~~G~-----~~~iv~p~~~~ 118 (342)
T 4d9b_A 77 LREGADTLITAGAIQSNHVRQ----TAAVAAKLGL-----HCVALLENPIG 118 (342)
T ss_dssp HHTTCCEEEEEEETTCHHHHH----HHHHHHHHTC-----EEEEEEECTTC
T ss_pred HHcCCCEEEEcCCcccHHHHH----HHHHHHHhCC-----cEEEEEeCCCC
Confidence 468999999888 47888887 8888999999 88877665443
No 32
>1tzj_A ACC deaminase, 1-aminocyclopropane-1-carboxylate deaminase; substrate, PLP, crystal, complex, hydrolase; HET: PLP; 1.99A {Pseudomonas SP} SCOP: c.79.1.1 PDB: 1rqx_A* 1tz2_A* 1tyz_A* 1tzk_A* 1tzm_A*
Probab=32.90 E-value=77 Score=27.33 Aligned_cols=40 Identities=10% Similarity=0.178 Sum_probs=29.5
Q ss_pred HhCCCCEEEEEe-eecCcccccchhhHHHHHHCCCCCCCCcEEEecCCCc
Q 025879 149 KSNQIKNVLVLG-ICTDVCVLDFVCSTLSARNRGFLAPLEDVIVYSRGCA 197 (247)
Q Consensus 149 ~~~~i~~lvi~G-~~Td~CV~~~~~Ta~~A~~~Gy~~~~~~ViVv~Da~a 197 (247)
.+.|.++|+-+| ...|.++. .|.-|..+|+ +++++.....
T Consensus 63 ~~~g~~~vv~~GassGN~g~a----lA~~a~~~G~-----~~~iv~p~~~ 103 (338)
T 1tzj_A 63 LAQGCDTLVSIGGIQSNQTRQ----VAAVAAHLGM-----KCVLVQENWV 103 (338)
T ss_dssp HHTTCCEEEEEEETTCHHHHH----HHHHHHHHTC-----EEEEEEECCS
T ss_pred HHcCCCEEEEcCCchhHHHHH----HHHHHHHhCC-----ceEEEecCCC
Confidence 367888888775 55567766 8888999999 8877665444
No 33
>2f9i_B Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; zinc ribbon, crotonase superfamily, spiral domain; 1.98A {Staphylococcus aureus}
Probab=25.43 E-value=1.3e+02 Score=25.99 Aligned_cols=44 Identities=14% Similarity=0.259 Sum_probs=30.3
Q ss_pred EEEEEecccccccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHhCCCcEEEEeec
Q 025879 31 GLVLVDVVNGFCTVGSGNLAPSQPDGQISEMVDESVRLARVFCEKKWPVFAFLDT 85 (247)
Q Consensus 31 ALvvID~Qn~F~~~~~g~l~~~~~~~~~~~il~~i~~l~~~ar~~g~pVi~~~~~ 85 (247)
...|+=++..|.. |++.. ..-.++.++++.|.+.+.|+|+..+.
T Consensus 122 ~V~v~a~d~~~~g---Gs~g~--------~~~~K~~r~ie~A~~~~lPlI~l~ds 165 (285)
T 2f9i_B 122 KFGVAVMDSRFRM---GSMGS--------VIGEKICRIIDYCTENRLPFILFSAS 165 (285)
T ss_dssp EEEEEEECTTTGG---GCCCH--------HHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred EEEEEEEcccccc---CcCCH--------HHHHHHHHHHHHHHHcCCCEEEEEeC
Confidence 3344444555654 56641 34577889999999999999998763
No 34
>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0
Probab=23.37 E-value=1.1e+02 Score=24.58 Aligned_cols=39 Identities=15% Similarity=0.250 Sum_probs=27.9
Q ss_pred EEEEEecccccccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHhCCCcEEEEe
Q 025879 31 GLVLVDVVNGFCTVGSGNLAPSQPDGQISEMVDESVRLARVFCEKKWPVFAFL 83 (247)
Q Consensus 31 ALvvID~Qn~F~~~~~g~l~~~~~~~~~~~il~~i~~l~~~ar~~g~pVi~~~ 83 (247)
-+|++|+-...++. ..+++...+.+++++++|++|++..
T Consensus 7 kli~~DlDGTLl~~--------------~~~~~~~~~ai~~l~~~Gi~v~laT 45 (266)
T 3pdw_A 7 KGYLIDLDGTMYNG--------------TEKIEEACEFVRTLKDRGVPYLFVT 45 (266)
T ss_dssp SEEEEECSSSTTCH--------------HHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CEEEEeCcCceEeC--------------CEeCccHHHHHHHHHHCCCeEEEEe
Confidence 36777875554431 2456777888999999999998763
No 35
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=20.85 E-value=3.2e+02 Score=22.43 Aligned_cols=64 Identities=22% Similarity=0.156 Sum_probs=41.5
Q ss_pred HHHhCCCCEEEEEeeecCcccccchhhHHHHHH--CCCCCCCCcEEEecCCCccCCcchhhhhcccccCCCchhhHHHHH
Q 025879 147 WVKSNQIKNVLVLGICTDVCVLDFVCSTLSARN--RGFLAPLEDVIVYSRGCATYDFPVHVAKNIKDALPHPQDLMHHIG 224 (247)
Q Consensus 147 ~L~~~~i~~lvi~G~~Td~CV~~~~~Ta~~A~~--~Gy~~~~~~ViVv~Da~as~~~~~h~a~~~~~~~~~~~~~~~~~~ 224 (247)
..+++||++|+++-... .||+-|++ .|. ++++|+--..- ..++. .+.+ .--
T Consensus 38 ra~e~~Ik~iVVAS~sG--------~TA~k~~e~~~~i-----~lVvVTh~~GF-~~pg~--------~e~~-----~e~ 90 (201)
T 1vp8_A 38 RAKELGIKHLVVASSYG--------DTAMKALEMAEGL-----EVVVVTYHTGF-VREGE--------NTMP-----PEV 90 (201)
T ss_dssp HHHHHTCCEEEEECSSS--------HHHHHHHHHCTTC-----EEEEEECCTTS-SSTTC--------CSSC-----HHH
T ss_pred HHHHcCCCEEEEEeCCC--------hHHHHHHHHhcCC-----eEEEEeCcCCC-CCCCC--------CcCC-----HHH
Confidence 44568999999987665 57766655 356 89999876653 44332 1111 223
Q ss_pred HHHHhhCCcEEee
Q 025879 225 LFIAKGRGAKVVS 237 (247)
Q Consensus 225 l~~~~~~~a~v~~ 237 (247)
...+...|++|.+
T Consensus 91 ~~~L~~~G~~V~t 103 (201)
T 1vp8_A 91 EEELRKRGAKIVR 103 (201)
T ss_dssp HHHHHHTTCEEEE
T ss_pred HHHHHhCCCEEEE
Confidence 4567889999887
No 36
>1v77_A PH1877P, hypothetical protein PH1877; RNAse P protein, TIM-barrel, RNA binding protein; 1.80A {Pyrococcus horikoshii} SCOP: c.6.3.2 PDB: 2czv_A*
Probab=20.56 E-value=75 Score=25.82 Aligned_cols=30 Identities=7% Similarity=-0.074 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHHHhCCCcEEEEeecCCCC
Q 025879 60 EMVDESVRLARVFCEKKWPVFAFLDTHYPD 89 (247)
Q Consensus 60 ~il~~i~~l~~~ar~~g~pVi~~~~~h~~~ 89 (247)
..+.+..++++.+|+.|.||+..-|.|.+.
T Consensus 144 ~~~~~~~~il~l~k~~g~~ivisSDAh~~~ 173 (212)
T 1v77_A 144 NLLRFMMKAWKLVEKYKVRRFLTSSAQEKW 173 (212)
T ss_dssp HHHHHHHHHHHHHHHHTCCEEEECCCSSGG
T ss_pred HHHHHHHHHHHHHHhcCCCEEEeCCCCChh
Confidence 456778889999999999999998888654
Done!