BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 025881
         (247 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q9HDW5|YFW6_SCHPO UPF0644 protein PB2B4.06 OS=Schizosaccharomyces pombe (strain 972 /
           ATCC 24843) GN=SPAPB2B4.06 PE=3 SV=2
          Length = 256

 Score = 34.3 bits (77), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 5/70 (7%)

Query: 18  ERKMVSDLSNRIDDLKV--DLEW---YKEVSRLKNKSYYDSFNNSLGGAGKPLSSPVVLA 72
           + K V ++ NR+ +LK+  DL     ++E+    N+S +   NN L G G+    PV+  
Sbjct: 69  QEKEVLEVENRLQNLKIVKDLRQNPSFRELRMPFNRSNHSLTNNLLSGPGRITVPPVIFY 128

Query: 73  DMEHRQVKTV 82
           D   RQV  +
Sbjct: 129 DKSTRQVYAI 138


>sp|Q0I3R3|ACKA_HAES1 Acetate kinase OS=Haemophilus somnus (strain 129Pt) GN=ackA PE=3
           SV=1
          Length = 398

 Score = 33.9 bits (76), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 17/60 (28%), Positives = 31/60 (51%)

Query: 71  LADMEHRQVKTVNSFLAETPESTEAMVNAKEAGEFAAVNVPSDVLQSQSSFLAISHLKNN 130
           +A + HR V     +      + E +   K+A EFA ++ P+ ++  + +F A  HLK+N
Sbjct: 83  IAAIGHRVVHGGEKYTKSVVITDEVIQGIKDAAEFAPLHNPAHLIGIEEAFKAFPHLKDN 142


>sp|B0UTZ5|ACKA_HAES2 Acetate kinase OS=Haemophilus somnus (strain 2336) GN=ackA PE=3
           SV=1
          Length = 398

 Score = 33.9 bits (76), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 17/60 (28%), Positives = 31/60 (51%)

Query: 71  LADMEHRQVKTVNSFLAETPESTEAMVNAKEAGEFAAVNVPSDVLQSQSSFLAISHLKNN 130
           +A + HR V     +      + E +   K+A EFA ++ P+ ++  + +F A  HLK+N
Sbjct: 83  IAAIGHRVVHGGEKYTKSVVITDEVIQGIKDAAEFAPLHNPAHLIGIEEAFKAFPHLKDN 142


>sp|Q80YR2|F16B2_MOUSE Protein FAM160B2 OS=Mus musculus GN=Fam160b2 PE=2 SV=2
          Length = 744

 Score = 32.3 bits (72), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 6/99 (6%)

Query: 37  EWYKEVSRLKNKSYY-DSF-NNSLGGAGKPLSSPVVLADMEHRQVKTVNSFLAETPESTE 94
           E Y++   L+   Y+ D F ++ L  + KP  +P   +D +    + VNSFL   PE  +
Sbjct: 491 ESYEDTLDLEEDPYFTDGFLDSGLQPSTKPPPAPATSSDGKTAVTEIVNSFLCLVPEEAK 550

Query: 95  AMVNAKEAGEFAAVNVPSDVLQSQSSFLAISHLKNNWPM 133
                +E G    V+    + Q  SS +A       WP+
Sbjct: 551 TSAFLEENGYDTYVHDAYGLFQECSSRVA----HWGWPL 585


>sp|Q6JAN0|GPR98_DANRE G-protein coupled receptor 98 OS=Danio rerio GN=gpr98 PE=2 SV=1
          Length = 6199

 Score = 31.6 bits (70), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 33/128 (25%), Positives = 57/128 (44%), Gaps = 13/128 (10%)

Query: 40   KEVSRLKNKSYYDSFNNSLGGAGKPLSSPVVLADMEHRQVKTVNSFLAETPESTE----A 95
            K   R  N S +     +  G  KP+   +V A+ E+++  T++S   E PE TE     
Sbjct: 911  KSRGRFGNVSIFWILEPTYSGDVKPVQGEIVFAEGEYQKNLTLSSVADEIPEKTENFTIT 970

Query: 96   MVNAKEAGEFAAVNVPSDVLQSQSSFLAISHLKNNWPMKIKIESGTNVCHLLLLIAAL-- 153
            ++NA         N+ S  L  +++   I   +   P+  ++  G  V +  +L A L  
Sbjct: 971  LLNATGGARLG--NILSARLSIRANDDPIYFAE---PVGQRVREG-GVANFTILRAGLAN 1024

Query: 154  -VSTITYR 160
             V+T+ YR
Sbjct: 1025 FVTTVNYR 1032


>sp|Q94FB9|AB1D_ARATH ABC transporter D family member 1 OS=Arabidopsis thaliana GN=ABCC1
           PE=1 SV=1
          Length = 1337

 Score = 30.8 bits (68), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 7/57 (12%)

Query: 152 ALVSTITYRTALKIRACKLEQGYNYSSSLISICQIVDQHPLFIQLVMAFNSIAFFLS 208
           ALV+T+ +RTAL  R  K+ QG+ + ++ +       + PLF++L+     + F LS
Sbjct: 111 ALVATVVFRTALSNRLAKV-QGFLFRAAFLR------RAPLFLRLISENIMLCFMLS 160


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.319    0.132    0.370 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 81,707,410
Number of Sequences: 539616
Number of extensions: 3023215
Number of successful extensions: 8416
Number of sequences better than 100.0: 15
Number of HSP's better than 100.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 8414
Number of HSP's gapped (non-prelim): 15
length of query: 247
length of database: 191,569,459
effective HSP length: 114
effective length of query: 133
effective length of database: 130,053,235
effective search space: 17297080255
effective search space used: 17297080255
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)