Query 025881
Match_columns 247
No_of_seqs 164 out of 535
Neff 5.9
Searched_HMMs 29240
Date Mon Mar 25 19:42:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025881.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025881hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1n0q_A 3ANK, 3 ankyrin repeats 98.8 2E-09 6.9E-14 78.4 2.9 74 14-111 1-75 (93)
2 4gpm_A Engineered protein OR26 98.6 7.8E-09 2.7E-13 84.9 2.3 73 14-110 36-109 (169)
3 2zgd_A 3 repeat synthetic anky 98.6 1.6E-08 5.4E-13 76.2 3.7 74 14-111 23-97 (110)
4 3aaa_C Myotrophin, protein V-1 98.6 1E-08 3.4E-13 78.0 1.6 73 15-111 7-80 (123)
5 3c5r_A BARD-1, BRCA1-associate 98.6 2E-08 6.9E-13 77.6 2.8 74 14-111 9-83 (137)
6 4b93_B Ankyrin repeat domain-c 98.5 3.5E-08 1.2E-12 86.3 3.7 74 14-111 151-225 (269)
7 2jab_A H10-2-G3; HER2, darpin, 98.5 3.3E-08 1.1E-12 76.6 2.1 76 12-111 11-87 (136)
8 2l6b_A NR1C; ankyrin, consensu 98.5 3.5E-08 1.2E-12 74.0 2.0 74 14-111 8-82 (115)
9 3aaa_C Myotrophin, protein V-1 98.5 8.2E-08 2.8E-12 72.9 4.0 68 21-111 45-113 (123)
10 3twr_A Tankyrase-2; ankyrin re 98.5 8.7E-08 3E-12 75.9 3.7 74 14-111 41-115 (165)
11 1k1a_A B-cell lymphoma 3-encod 98.4 1E-07 3.5E-12 79.1 3.6 79 13-111 7-86 (241)
12 1sw6_A Regulatory protein SWI6 98.4 1.4E-07 4.8E-12 84.1 4.7 87 14-111 200-323 (327)
13 2jab_A H10-2-G3; HER2, darpin, 98.4 1.6E-07 5.3E-12 72.7 4.2 73 15-111 47-120 (136)
14 3c5r_A BARD-1, BRCA1-associate 98.4 7.7E-08 2.6E-12 74.2 2.3 73 15-111 43-116 (137)
15 1oy3_D Transcription factor in 98.4 8.6E-08 2.9E-12 81.3 2.3 78 13-111 7-85 (282)
16 1s70_B 130 kDa myosin-binding 98.4 1.5E-07 5.2E-12 81.0 3.8 74 14-111 198-272 (299)
17 1k1a_A B-cell lymphoma 3-encod 98.4 1.2E-07 4.1E-12 78.8 3.0 45 62-111 178-223 (241)
18 3f6q_A Integrin-linked protein 98.4 1.6E-07 5.5E-12 75.6 3.6 74 14-111 38-112 (179)
19 1n0r_A 4ANK, 4 ankyrin repeats 98.4 1.1E-07 3.7E-12 71.0 2.3 72 15-110 2-74 (126)
20 1dcq_A PYK2-associated protein 98.4 9.1E-08 3.1E-12 84.3 2.1 75 13-111 167-245 (278)
21 1oy3_D Transcription factor in 98.4 1.1E-07 3.9E-12 80.5 2.6 75 13-111 156-232 (282)
22 1awc_B Protein (GA binding pro 98.4 9.7E-08 3.3E-12 75.0 1.7 75 13-111 32-107 (153)
23 3deo_A Signal recognition part 98.4 1.1E-07 3.7E-12 77.4 1.9 75 12-111 41-117 (183)
24 2dzn_A Probable 26S proteasome 98.3 1.6E-07 5.3E-12 77.6 2.8 75 14-111 106-181 (228)
25 3ehr_A Osteoclast-stimulating 98.3 7.4E-08 2.5E-12 80.3 0.7 76 13-111 71-147 (222)
26 4hbd_A KN motif and ankyrin re 98.3 1.3E-07 4.4E-12 82.4 2.0 74 15-111 183-257 (276)
27 1bd8_A P19INK4D CDK4/6 inhibit 98.3 1.3E-07 4.4E-12 74.0 1.8 73 14-111 35-108 (156)
28 1d9s_A Cyclin-dependent kinase 98.3 2.2E-07 7.7E-12 71.8 3.2 73 14-111 11-85 (136)
29 3ehr_A Osteoclast-stimulating 98.3 8.2E-08 2.8E-12 80.0 0.7 74 15-111 106-180 (222)
30 3deo_A Signal recognition part 98.3 1.7E-07 5.9E-12 76.2 2.5 73 15-111 76-150 (183)
31 4gpm_A Engineered protein OR26 98.3 2.1E-07 7.1E-12 76.3 2.9 68 21-111 9-77 (169)
32 2vge_A RELA-associated inhibit 98.3 3E-07 1E-11 78.3 4.0 78 10-111 16-94 (229)
33 2rfa_A Transient receptor pote 98.3 1.2E-07 4.2E-12 78.8 1.3 87 14-111 74-161 (232)
34 1n0r_A 4ANK, 4 ankyrin repeats 98.3 1.7E-07 5.8E-12 69.9 1.8 68 21-111 40-108 (126)
35 1ihb_A P18-INK4C(INK6), cyclin 98.3 1.9E-07 6.4E-12 73.4 1.9 73 14-111 37-110 (162)
36 3twr_A Tankyrase-2; ankyrin re 98.3 3.1E-07 1.1E-11 72.6 2.9 76 13-111 6-82 (165)
37 3v30_A DNA-binding protein rfx 98.3 2E-07 6.9E-12 74.3 1.7 75 13-111 34-109 (172)
38 2b0o_E UPLC1; arfgap, structur 98.3 1.7E-07 6E-12 83.5 1.3 75 13-111 188-266 (301)
39 2y1l_E Darpin-8.4; hydrolase-i 98.3 2.8E-07 9.4E-12 73.7 2.3 75 13-111 45-120 (169)
40 1awc_B Protein (GA binding pro 98.3 2.6E-07 9E-12 72.5 2.1 71 16-111 3-74 (153)
41 1ikn_D Protein (I-kappa-B-alph 98.3 4.3E-07 1.5E-11 75.9 3.5 79 14-110 77-157 (236)
42 3f6q_A Integrin-linked protein 98.3 3.7E-07 1.3E-11 73.5 3.0 74 15-111 5-79 (179)
43 3utm_A Tankyrase-1; tankyrase, 98.3 2.5E-07 8.5E-12 80.5 2.0 44 62-110 242-286 (351)
44 2rfm_A Putative ankyrin repeat 98.2 2.8E-07 9.4E-12 74.9 2.0 74 14-111 67-141 (192)
45 1d9s_A Cyclin-dependent kinase 98.2 9E-08 3.1E-12 74.1 -0.9 73 14-111 44-118 (136)
46 3v31_A Ankyrin repeat family A 98.2 3.1E-07 1E-11 72.8 2.0 74 14-111 35-109 (167)
47 1ycs_B 53BP2, P53BP2; ankyrin 98.2 3.3E-07 1.1E-11 77.7 2.3 73 15-111 37-110 (239)
48 1ycs_B 53BP2, P53BP2; ankyrin 98.2 2.9E-07 9.7E-12 78.1 1.8 75 13-111 68-144 (239)
49 3ui2_A Signal recognition part 98.2 3.5E-07 1.2E-11 78.3 2.3 75 12-111 42-118 (244)
50 3aji_A 26S proteasome non-ATPa 98.2 3.8E-07 1.3E-11 75.6 2.3 73 14-110 105-178 (231)
51 1yyh_A HN1;, notch 1, ankyrin 98.2 3.4E-07 1.2E-11 77.9 2.0 75 13-111 122-197 (253)
52 3lvq_E ARF-GAP with SH3 domain 98.2 3E-07 1E-11 87.0 1.7 75 13-111 169-247 (497)
53 3v30_A DNA-binding protein rfx 98.2 5E-07 1.7E-11 71.9 2.7 69 21-111 7-76 (172)
54 3ui2_A Signal recognition part 98.2 3.6E-07 1.2E-11 78.1 2.0 73 15-111 77-151 (244)
55 1ikn_D Protein (I-kappa-B-alph 98.2 2.2E-07 7.7E-12 77.7 0.5 78 14-110 44-123 (236)
56 3ljn_A Hypothetical protein; a 98.2 2.7E-07 9.2E-12 82.3 1.1 77 15-110 173-250 (364)
57 2y1l_E Darpin-8.4; hydrolase-i 98.2 6.4E-07 2.2E-11 71.6 2.9 73 15-111 14-87 (169)
58 2vge_A RELA-associated inhibit 98.2 8.5E-07 2.9E-11 75.5 3.8 75 13-111 52-128 (229)
59 3b7b_A Euchromatic histone-lys 98.2 4.5E-07 1.5E-11 75.4 1.8 74 14-111 110-184 (237)
60 3d9h_A CDNA FLJ77766, highly s 98.2 8.1E-07 2.8E-11 77.4 3.2 42 64-110 219-261 (285)
61 1bi7_B P16INK4A, MTS1, multipl 98.1 1.1E-06 3.7E-11 69.5 3.5 76 11-111 8-85 (156)
62 2xai_A ASB-9, ankyrin repeat a 98.1 6.6E-07 2.3E-11 76.6 2.4 43 64-111 163-206 (261)
63 1n11_A Ankyrin; clathrin, BAND 98.1 5.6E-07 1.9E-11 82.0 2.0 73 14-110 277-350 (437)
64 3jxi_A Vanilloid receptor-rela 98.1 5.1E-07 1.8E-11 76.4 1.6 77 14-111 92-183 (260)
65 1bi7_B P16INK4A, MTS1, multipl 98.1 6.2E-07 2.1E-11 70.8 1.9 73 14-111 44-118 (156)
66 3v31_A Ankyrin repeat family A 98.1 6.7E-07 2.3E-11 70.8 2.0 68 21-111 8-76 (167)
67 2f8y_A Notch homolog 1, transl 98.1 4.5E-07 1.6E-11 74.7 1.0 75 13-111 90-165 (223)
68 2etb_A Transient receptor pote 98.1 1E-06 3.5E-11 74.6 3.1 78 13-111 88-179 (256)
69 2rfm_A Putative ankyrin repeat 98.1 6.4E-07 2.2E-11 72.7 1.6 74 14-111 34-108 (192)
70 2dzn_A Probable 26S proteasome 98.1 1.1E-06 3.6E-11 72.5 2.9 77 13-111 70-147 (228)
71 2xai_A ASB-9, ankyrin repeat a 98.1 9.8E-07 3.4E-11 75.5 2.7 74 14-111 2-76 (261)
72 2pnn_A Transient receptor pote 98.1 7E-07 2.4E-11 76.4 1.6 90 14-111 100-191 (273)
73 2fo1_E LIN-12 protein; beta-ba 98.1 5.3E-07 1.8E-11 81.6 0.8 75 14-111 278-353 (373)
74 1bd8_A P19INK4D CDK4/6 inhibit 98.1 1.6E-06 5.5E-11 67.7 3.3 73 15-111 2-75 (156)
75 2pnn_A Transient receptor pote 98.1 8.9E-07 3E-11 75.8 1.8 86 13-111 52-155 (273)
76 1yyh_A HN1;, notch 1, ankyrin 98.1 8.6E-07 2.9E-11 75.3 1.6 76 13-111 88-164 (253)
77 4g8k_A 2-5A-dependent ribonucl 98.1 2.5E-06 8.6E-11 75.2 4.6 64 7-89 17-82 (337)
78 2f8y_A Notch homolog 1, transl 98.1 9.7E-07 3.3E-11 72.7 1.8 76 13-111 56-132 (223)
79 3ljn_A Hypothetical protein; a 98.1 1.3E-06 4.6E-11 77.7 2.8 79 14-111 137-218 (364)
80 3utm_A Tankyrase-1; tankyrase, 98.1 1.5E-06 5.1E-11 75.6 3.0 73 14-110 57-130 (351)
81 4hbd_A KN motif and ankyrin re 98.1 1E-06 3.4E-11 76.7 1.8 87 14-111 110-223 (276)
82 1ihb_A P18-INK4C(INK6), cyclin 98.1 2.4E-06 8.2E-11 67.0 3.7 72 15-111 5-77 (162)
83 2etb_A Transient receptor pote 98.1 2.2E-06 7.4E-11 72.5 3.7 86 13-111 41-143 (256)
84 3jxi_A Vanilloid receptor-rela 98.0 7.8E-07 2.7E-11 75.3 0.8 86 13-111 44-147 (260)
85 3jue_A Arfgap with coiled-coil 98.0 1.2E-06 4E-11 81.0 2.0 41 65-110 233-274 (368)
86 1s70_B 130 kDa myosin-binding 98.0 2.5E-06 8.6E-11 73.3 4.0 75 13-111 38-113 (299)
87 3aji_A 26S proteasome non-ATPa 98.0 1.6E-06 5.6E-11 71.6 2.6 68 21-110 11-79 (231)
88 3hra_A Ankyrin repeat family p 98.0 2E-06 6.9E-11 69.6 2.9 68 21-110 10-78 (201)
89 3hra_A Ankyrin repeat family p 98.0 1.8E-06 6.1E-11 69.9 2.4 76 13-111 37-113 (201)
90 2rfa_A Transient receptor pote 98.0 1.9E-06 6.5E-11 71.5 2.6 78 15-110 3-81 (232)
91 3d9h_A CDNA FLJ77766, highly s 98.0 1.6E-06 5.3E-11 75.6 1.9 75 13-111 57-132 (285)
92 3b7b_A Euchromatic histone-lys 98.0 2.2E-06 7.6E-11 71.1 2.1 76 13-111 75-151 (237)
93 1wdy_A 2-5A-dependent ribonucl 97.9 3.2E-06 1.1E-10 71.1 2.6 25 13-38 146-170 (285)
94 1wdy_A 2-5A-dependent ribonucl 97.9 7.3E-06 2.5E-10 68.9 4.6 74 14-111 4-79 (285)
95 3t8k_A Uncharacterized protein 97.9 7.5E-06 2.6E-10 67.8 4.3 74 14-111 37-122 (186)
96 4b93_B Ankyrin repeat domain-c 97.9 3.4E-06 1.1E-10 73.6 2.2 24 13-37 84-107 (269)
97 1n11_A Ankyrin; clathrin, BAND 97.9 3.6E-06 1.2E-10 76.6 2.4 24 13-37 12-35 (437)
98 2l6b_A NR1C; ankyrin, consensu 97.9 5.8E-06 2E-10 61.6 2.9 70 14-107 41-111 (115)
99 4g8k_A 2-5A-dependent ribonucl 97.9 3.7E-06 1.3E-10 74.1 1.6 88 14-111 167-280 (337)
100 3t8k_A Uncharacterized protein 97.8 3.1E-06 1.1E-10 70.1 0.8 75 13-111 73-161 (186)
101 3kea_A K1L; tropism, ANK repea 97.8 5E-06 1.7E-10 72.4 2.1 71 14-110 30-101 (285)
102 2fo1_E LIN-12 protein; beta-ba 97.8 4.4E-06 1.5E-10 75.6 1.2 81 14-111 124-206 (373)
103 3kea_A K1L; tropism, ANK repea 97.8 8.8E-06 3E-10 70.9 2.3 73 15-111 62-136 (285)
104 1n0q_A 3ANK, 3 ankyrin repeats 97.7 2E-05 7E-10 56.7 2.9 56 14-88 34-90 (93)
105 1sw6_A Regulatory protein SWI6 97.6 6.7E-06 2.3E-10 73.2 -0.1 44 62-110 125-170 (327)
106 1dcq_A PYK2-associated protein 97.6 2.2E-05 7.4E-10 68.9 3.1 74 21-111 135-212 (278)
107 3eu9_A Huntingtin-interacting 97.6 2.4E-05 8.1E-10 64.2 2.9 76 13-111 40-116 (240)
108 3eu9_A Huntingtin-interacting 97.6 2.2E-05 7.5E-10 64.4 2.3 74 14-111 8-83 (240)
109 2b0o_E UPLC1; arfgap, structur 97.4 6.5E-05 2.2E-09 66.7 2.7 69 13-111 224-293 (301)
110 3jue_A Arfgap with coiled-coil 97.4 0.00011 3.6E-09 67.8 3.9 68 21-111 240-308 (368)
111 3lvq_E ARF-GAP with SH3 domain 97.3 0.00013 4.4E-09 68.9 3.5 73 21-111 137-214 (497)
112 2zgd_A 3 repeat synthetic anky 97.2 3.1E-05 1.1E-09 57.8 -1.5 51 51-111 13-64 (110)
113 2aja_A Ankyrin repeat family p 96.5 7.1E-05 2.4E-09 69.1 -5.5 75 14-110 127-204 (376)
114 2aja_A Ankyrin repeat family p 95.6 0.00062 2.1E-08 62.8 -3.4 78 15-111 92-170 (376)
No 1
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=98.79 E-value=2e-09 Score=78.38 Aligned_cols=74 Identities=19% Similarity=0.190 Sum_probs=62.1
Q ss_pred hhHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCCCCCcee-eeecccchHHHHHHhhcCCCC
Q 025881 14 EGIAERKMVSDLSNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLSSPVVL-ADMEHRQVKTVNSFLAETPES 92 (247)
Q Consensus 14 ~~~~~~~~~~~~~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~GNTiL-LAv~~~~~kiv~~Ll~~~~~~ 92 (247)
+|.+.+ +.|+++++.|.++.|++. ..-+| .+|.+|+||| .|+..++.+++++|++.+
T Consensus 1 ~g~t~L-~~A~~~~~~~~v~~Ll~~-------------g~~~n-----~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g--- 58 (93)
T 1n0q_A 1 NGRTPL-HLAARNGHLEVVKLLLEA-------------GADVN-----AKDKNGRTPLHLAARNGHLEVVKLLLEAG--- 58 (93)
T ss_dssp --CCHH-HHHHHHTCHHHHHHHHHT-------------TCCTT-----CCCTTSCCHHHHHHHTTCHHHHHHHHHTT---
T ss_pred CCCcHH-HHHHHcCCHHHHHHHHHc-------------CCCCc-----ccCCCCCCHHHHHHHcCCHHHHHHHHHcC---
Confidence 355666 789999999999988752 12378 9999999999 999999999999999764
Q ss_pred ccccccccccCCCCccCCC
Q 025881 93 TEAMVNAKEAGEFAAVNVP 111 (247)
Q Consensus 93 ~~v~vn~~N~~G~TALDI~ 111 (247)
.++|.+|++|.|||+++
T Consensus 59 --a~~~~~d~~g~t~l~~A 75 (93)
T 1n0q_A 59 --ADVNAKDKNGRTPLHLA 75 (93)
T ss_dssp --CCTTCCCTTSCCHHHHH
T ss_pred --CCCCccCCCCCCHHHHH
Confidence 58899999999999984
No 2
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=98.64 E-value=7.8e-09 Score=84.92 Aligned_cols=73 Identities=16% Similarity=0.128 Sum_probs=38.5
Q ss_pred hhHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCCCCCcee-eeecccchHHHHHHhhcCCCC
Q 025881 14 EGIAERKMVSDLSNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLSSPVVL-ADMEHRQVKTVNSFLAETPES 92 (247)
Q Consensus 14 ~~~~~~~~~~~~~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~GNTiL-LAv~~~~~kiv~~Ll~~~~~~ 92 (247)
+|.+-+ +.|+.+++.+.++.|++. ..=+| .+|.+|+||| +|+..++.+++++|++.+
T Consensus 36 ~g~t~l-~~a~~~~~~~~~~~ll~~-------------gad~~-----~~d~~g~TpLh~A~~~g~~~~v~~Ll~~g--- 93 (169)
T 4gpm_A 36 DGRTPL-HHAAENGHKEVVKLLISK-------------GADVN-----AKDSDGRTPLHHAAENGHKEVVKLLISKG--- 93 (169)
T ss_dssp TSCCHH-HHHHHTTCHHHHHHHHHT-------------TCCTT-----CCCTTSCCHHHHHHHTTCHHHHHHHHHTT---
T ss_pred CCCCHH-HHHHHcCCHHHHHHHHhc-------------ccchh-----hhccCCCCHHHHHHHcCCHHHHHHHHHCc---
Confidence 344444 555556666555555431 01145 5555555555 555555555555555432
Q ss_pred ccccccccccCCCCccCC
Q 025881 93 TEAMVNAKEAGEFAAVNV 110 (247)
Q Consensus 93 ~~v~vn~~N~~G~TALDI 110 (247)
.++|.+|.+|.|||++
T Consensus 94 --advn~~d~~G~TpLh~ 109 (169)
T 4gpm_A 94 --ADVNAKDSDGRTPLHH 109 (169)
T ss_dssp --CCTTCCCTTSCCHHHH
T ss_pred --CCCCCCCCCCCCHHHH
Confidence 3555555555555555
No 3
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=98.63 E-value=1.6e-08 Score=76.25 Aligned_cols=74 Identities=12% Similarity=0.084 Sum_probs=64.1
Q ss_pred hhHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCCCCCcee-eeecccchHHHHHHhhcCCCC
Q 025881 14 EGIAERKMVSDLSNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLSSPVVL-ADMEHRQVKTVNSFLAETPES 92 (247)
Q Consensus 14 ~~~~~~~~~~~~~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~GNTiL-LAv~~~~~kiv~~Ll~~~~~~ 92 (247)
+|.+.+ ..|+++|+.+.++.|++. ..-+| .+|.+|+||| +|+..++.+++++|+..+
T Consensus 23 ~g~t~L-~~A~~~g~~~~v~~Ll~~-------------g~~i~-----~~d~~g~tpLh~A~~~~~~~~v~~Ll~~g--- 80 (110)
T 2zgd_A 23 DLGKKL-LEAARAGQDDEVRILMAN-------------GADVA-----AKDKNGSTPLHLAARNGHLEVVKLLLEAG--- 80 (110)
T ss_dssp CHHHHH-HHHHHHTCHHHHHHHHHT-------------TCCTT-----CCCTTCCCHHHHHHHTTCHHHHHHHHHTT---
T ss_pred ccchHH-HHHHHcCCHHHHHHHHHc-------------CCCCC-----ccCCCCCCHHHHHHHcCCHHHHHHHHHcC---
Confidence 577777 899999999999988853 12478 9999999999 999999999999999753
Q ss_pred ccccccccccCCCCccCCC
Q 025881 93 TEAMVNAKEAGEFAAVNVP 111 (247)
Q Consensus 93 ~~v~vn~~N~~G~TALDI~ 111 (247)
.++|.+|..|.||||++
T Consensus 81 --a~~~~~d~~g~tpl~~A 97 (110)
T 2zgd_A 81 --ADVXAQDKFGKTAFDIS 97 (110)
T ss_dssp --CCTTCCCTTSCCHHHHH
T ss_pred --CCccccccCCCcHHHHH
Confidence 58899999999999984
No 4
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=98.59 E-value=1e-08 Score=78.03 Aligned_cols=73 Identities=15% Similarity=0.039 Sum_probs=57.4
Q ss_pred hHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCCCCCcee-eeecccchHHHHHHhhcCCCCc
Q 025881 15 GIAERKMVSDLSNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLSSPVVL-ADMEHRQVKTVNSFLAETPEST 93 (247)
Q Consensus 15 ~~~~~~~~~~~~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~GNTiL-LAv~~~~~kiv~~Ll~~~~~~~ 93 (247)
|.+.+ +.|+++++.+.++.|++. ..-+| .+|.+|+||| .|+..++.+++++|++.+
T Consensus 7 ~~~~l-~~A~~~~~~~~v~~ll~~-------------~~~~~-----~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g---- 63 (123)
T 3aaa_C 7 CDKEF-MWALKNGDLDEVKDYVAK-------------GEDVN-----RTLEGGRKPLHYAADCGQLEILEFLLLKG---- 63 (123)
T ss_dssp CHHHH-HHHHHTTCHHHHHHHHHT-------------TCCTT-----SCCTTSSCHHHHHHHTTCHHHHHHHHTTT----
T ss_pred cchHH-HHHHHcCCHHHHHHHHHc-------------CCCcC-----ccCCCCCcHHHHHHHcCCHHHHHHHHHcC----
Confidence 45555 788889999988887751 11267 8888999999 999999999999888653
Q ss_pred cccccccccCCCCccCCC
Q 025881 94 EAMVNAKEAGEFAAVNVP 111 (247)
Q Consensus 94 ~v~vn~~N~~G~TALDI~ 111 (247)
.++|.+|.+|.|||+++
T Consensus 64 -~~~~~~d~~g~tpL~~A 80 (123)
T 3aaa_C 64 -ADINAPDKHHITPLLSA 80 (123)
T ss_dssp -CCTTCCCTTSCCHHHHH
T ss_pred -CCCCcCCCCCCCHHHHH
Confidence 57888899999999884
No 5
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=98.57 E-value=2e-08 Score=77.56 Aligned_cols=74 Identities=19% Similarity=0.153 Sum_probs=50.1
Q ss_pred hhHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCCCCCcee-eeecccchHHHHHHhhcCCCC
Q 025881 14 EGIAERKMVSDLSNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLSSPVVL-ADMEHRQVKTVNSFLAETPES 92 (247)
Q Consensus 14 ~~~~~~~~~~~~~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~GNTiL-LAv~~~~~kiv~~Ll~~~~~~ 92 (247)
+|.+.+ +.|+++++++.++.|++. ..-+| .+|.+|+||| +|+..++.+++++|+..+
T Consensus 9 ~g~t~L-~~A~~~~~~~~~~~Ll~~-------------g~~~~-----~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g--- 66 (137)
T 3c5r_A 9 RGETLL-HIASIKGDIPSVEYLLQN-------------GSDPN-----VKDHAGWTPLHEACNHGHLKVVELLLQHK--- 66 (137)
T ss_dssp TCCCHH-HHHHHHTCHHHHHHHHHT-------------TCCSC-----CCCTTSCCHHHHHHHTTCHHHHHHHHHTT---
T ss_pred CCCCHH-HHHHHcCCHHHHHHHHHc-------------CCCCC-----cCCCCCCCHHHHHHHcCCHHHHHHHHHcC---
Confidence 466666 777777887777777652 11256 6777777777 777777777777777542
Q ss_pred ccccccccccCCCCccCCC
Q 025881 93 TEAMVNAKEAGEFAAVNVP 111 (247)
Q Consensus 93 ~~v~vn~~N~~G~TALDI~ 111 (247)
.++|..|..|.|||+++
T Consensus 67 --~~~~~~~~~g~t~L~~A 83 (137)
T 3c5r_A 67 --ALVNTTGYQNDSPLHDA 83 (137)
T ss_dssp --CCTTCCCGGGCCHHHHH
T ss_pred --CcccCcCCCCCCHHHHH
Confidence 46677777777777773
No 6
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=98.54 E-value=3.5e-08 Score=86.28 Aligned_cols=74 Identities=15% Similarity=0.093 Sum_probs=61.3
Q ss_pred hhHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCCCCCcee-eeecccchHHHHHHhhcCCCC
Q 025881 14 EGIAERKMVSDLSNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLSSPVVL-ADMEHRQVKTVNSFLAETPES 92 (247)
Q Consensus 14 ~~~~~~~~~~~~~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~GNTiL-LAv~~~~~kiv~~Ll~~~~~~ 92 (247)
+|.+-+ +.|+++|+.+++++|++. ..=+| .+|.+|+||| +|+..++.+++++|+..+
T Consensus 151 ~g~TpL-~~A~~~g~~~~v~~Ll~~-------------gadvn-----~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~G--- 208 (269)
T 4b93_B 151 SGNTPL-IYACSGGHHELVALLLQH-------------GASIN-----ASNNKGNTALHEAVIEKHVFVVELLLLHG--- 208 (269)
T ss_dssp TCCCHH-HHHHHTTCGGGHHHHHHT-------------TCCTT-----CBCTTSCBHHHHHHHTTCHHHHHHHHHTT---
T ss_pred CCCCHH-HHHHHCCCHHHHHHHHHC-------------CCCCC-----ccccCCCcHHHHHHHcCCHHHHHHHHHCC---
Confidence 466666 788999999998888752 11278 8999999999 999999999999999753
Q ss_pred ccccccccccCCCCccCCC
Q 025881 93 TEAMVNAKEAGEFAAVNVP 111 (247)
Q Consensus 93 ~~v~vn~~N~~G~TALDI~ 111 (247)
.++|++|++|.||||++
T Consensus 209 --ad~~~~d~~G~TpL~~A 225 (269)
T 4b93_B 209 --ASVQVLNKRQRTAVDCA 225 (269)
T ss_dssp --CCSCCCCTTSCCSGGGS
T ss_pred --CCCCCcCCCCCCHHHHH
Confidence 58899999999999995
No 7
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=98.49 E-value=3.3e-08 Score=76.55 Aligned_cols=76 Identities=17% Similarity=0.131 Sum_probs=61.8
Q ss_pred hhhhHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCCCCCcee-eeecccchHHHHHHhhcCC
Q 025881 12 LEEGIAERKMVSDLSNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLSSPVVL-ADMEHRQVKTVNSFLAETP 90 (247)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~GNTiL-LAv~~~~~kiv~~Ll~~~~ 90 (247)
-..|.+.+ +.|+++|+.+.++.|++. ..-+| .+|.+|+||| +|+..++.+++++|+..+
T Consensus 11 ~~~~~t~l-~~A~~~g~~~~v~~Ll~~-------------g~~~~-----~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g- 70 (136)
T 2jab_A 11 GSDLGKKL-LEAARAGQDDEVRILMAN-------------GADVN-----AKDEYGLTPLYLATAHGHLEIVEVLLKNG- 70 (136)
T ss_dssp -CHHHHHH-HHHHHHTCHHHHHHHHHT-------------TCCTT-----CCCTTSCCHHHHHHHHTCHHHHHHHHHTT-
T ss_pred cccccHHH-HHHHHhCCHHHHHHHHHc-------------CCCCC-----CcCCCCCCHHHHHHHcCCHHHHHHHHHcC-
Confidence 34566777 889999999999888762 11368 8999999999 999999999999999753
Q ss_pred CCccccccccccCCCCccCCC
Q 025881 91 ESTEAMVNAKEAGEFAAVNVP 111 (247)
Q Consensus 91 ~~~~v~vn~~N~~G~TALDI~ 111 (247)
.++|..|.+|.|||+.+
T Consensus 71 ----~~~~~~d~~g~t~L~~A 87 (136)
T 2jab_A 71 ----ADVNAVDAIGFTPLHLA 87 (136)
T ss_dssp ----CCTTCCCTTCCCHHHHH
T ss_pred ----CCCCcCCCCCCCHHHHH
Confidence 57889999999999994
No 8
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=98.49 E-value=3.5e-08 Score=73.95 Aligned_cols=74 Identities=16% Similarity=0.136 Sum_probs=63.0
Q ss_pred hhHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCCCCCcee-eeecccchHHHHHHhhcCCCC
Q 025881 14 EGIAERKMVSDLSNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLSSPVVL-ADMEHRQVKTVNSFLAETPES 92 (247)
Q Consensus 14 ~~~~~~~~~~~~~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~GNTiL-LAv~~~~~kiv~~Ll~~~~~~ 92 (247)
+|.+.+ ..|+++++++.++.|++- ..-+| .+|.+|+||| .|+..++.+++++|++.+
T Consensus 8 ~g~t~L-~~A~~~~~~~~~~~Ll~~-------------g~~~~-----~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g--- 65 (115)
T 2l6b_A 8 DGNTPL-HNAAKNGHAEEVKKLLSK-------------GADVN-----ARSKDGNTPLHLAAKNGHAEIVKLLLAKG--- 65 (115)
T ss_dssp SSCCHH-HHHHHHTCHHHHHHHTTT-------------TCCSS-----CCCSSSCCTTHHHHTTTCHHHHHHHTTTT---
T ss_pred CCCCHH-HHHHHcCCHHHHHHHHHc-------------CCCCC-----CcCCCCCCHHHHHHHcCcHHHHHHHHHcC---
Confidence 566666 889999999998888752 12388 9999999999 999999999999999753
Q ss_pred ccccccccccCCCCccCCC
Q 025881 93 TEAMVNAKEAGEFAAVNVP 111 (247)
Q Consensus 93 ~~v~vn~~N~~G~TALDI~ 111 (247)
.++|.+|..|.|||+++
T Consensus 66 --~~~~~~d~~g~tpl~~A 82 (115)
T 2l6b_A 66 --ADVNARSKDGNTPEHLA 82 (115)
T ss_dssp --CCTTCCCTTCCCTTHHH
T ss_pred --CCCcccCCCCCCHHHHH
Confidence 58899999999999994
No 9
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=98.48 E-value=8.2e-08 Score=72.89 Aligned_cols=68 Identities=15% Similarity=0.052 Sum_probs=59.4
Q ss_pred HHHhhhcchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCCCCCcee-eeecccchHHHHHHhhcCCCCccccccc
Q 025881 21 MVSDLSNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLSSPVVL-ADMEHRQVKTVNSFLAETPESTEAMVNA 99 (247)
Q Consensus 21 ~~~~~~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~GNTiL-LAv~~~~~kiv~~Ll~~~~~~~~v~vn~ 99 (247)
+.|+++++.+.++.|++. ..-+| .+|.+|+||| +|+..++.+++++|++.+ .+++.
T Consensus 45 ~~A~~~~~~~~v~~Ll~~-------------g~~~~-----~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g-----a~~~~ 101 (123)
T 3aaa_C 45 HYAADCGQLEILEFLLLK-------------GADIN-----APDKHHITPLLSAVYEGHVSCVKLLLSKG-----ADKTV 101 (123)
T ss_dssp HHHHHTTCHHHHHHHHTT-------------TCCTT-----CCCTTSCCHHHHHHHHTCHHHHHHHHHTT-----CCTTC
T ss_pred HHHHHcCCHHHHHHHHHc-------------CCCCC-----cCCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCCCC
Confidence 689999999999888752 12378 9999999999 999999999999999863 58899
Q ss_pred cccCCCCccCCC
Q 025881 100 KEAGEFAAVNVP 111 (247)
Q Consensus 100 ~N~~G~TALDI~ 111 (247)
+|.+|.||||++
T Consensus 102 ~~~~g~t~l~~A 113 (123)
T 3aaa_C 102 KGPDGLTAFEAT 113 (123)
T ss_dssp CCTTSCCHHHHC
T ss_pred cCCCCCCHHHHh
Confidence 999999999985
No 10
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=98.46 E-value=8.7e-08 Score=75.90 Aligned_cols=74 Identities=14% Similarity=0.087 Sum_probs=58.9
Q ss_pred hhHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCCCCCcee-eeecccchHHHHHHhhcCCCC
Q 025881 14 EGIAERKMVSDLSNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLSSPVVL-ADMEHRQVKTVNSFLAETPES 92 (247)
Q Consensus 14 ~~~~~~~~~~~~~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~GNTiL-LAv~~~~~kiv~~Ll~~~~~~ 92 (247)
+|.+.+ +.|+++++.+.++.|++. ..-+| .+|.+|+||| +|+..++.+++++|+..+
T Consensus 41 ~g~t~L-~~A~~~~~~~~v~~Ll~~-------------g~~~~-----~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g--- 98 (165)
T 3twr_A 41 RQSTPL-HFAAGYNRVSVVEYLLQH-------------GADVH-----AKDKGGLVPLHNACSYGHYEVAELLVKHG--- 98 (165)
T ss_dssp TCCCHH-HHHHHTTCHHHHHHHHHT-------------TCCTT-----CCCTTSCCHHHHHHHTTCHHHHHHHHHTT---
T ss_pred CCCCHH-HHHHHcChHHHHHHHHhc-------------CCCCC-----ccCCCCCCHHHHHHHcCcHHHHHHHHhCC---
Confidence 455666 789999999988888762 11367 8888999999 999999999999888753
Q ss_pred ccccccccccCCCCccCCC
Q 025881 93 TEAMVNAKEAGEFAAVNVP 111 (247)
Q Consensus 93 ~~v~vn~~N~~G~TALDI~ 111 (247)
.++|..|..|.|||+++
T Consensus 99 --~~~~~~~~~g~t~L~~A 115 (165)
T 3twr_A 99 --AVVNVADLWKFTPLHEA 115 (165)
T ss_dssp --CCTTCCCTTCCCHHHHH
T ss_pred --CCCCCcCCCCCCHHHHH
Confidence 57888888999999884
No 11
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=98.43 E-value=1e-07 Score=79.12 Aligned_cols=79 Identities=9% Similarity=-0.002 Sum_probs=68.8
Q ss_pred hhhHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCCCCCcee-eeecccchHHHHHHhhcCCC
Q 025881 13 EEGIAERKMVSDLSNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLSSPVVL-ADMEHRQVKTVNSFLAETPE 91 (247)
Q Consensus 13 ~~~~~~~~~~~~~~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~GNTiL-LAv~~~~~kiv~~Ll~~~~~ 91 (247)
.+|.+.+ ..|+++|+.|.++.|++++.+. ..-+| .+|.+|+||| +|+..++.+++++|++.+
T Consensus 7 ~~g~t~L-~~A~~~g~~~~v~~Ll~~~~~~---------~~~~~-----~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-- 69 (241)
T 1k1a_A 7 EDGDTPL-HIAVVQGNLPAVHRLVNLFQQG---------GRELD-----IYNNLRQTPLHLAVITTLPSVVRLLVTAG-- 69 (241)
T ss_dssp CTTCCHH-HHHHHTTCHHHHHHHHHHHHHT---------TCCSC-----CCCTTSCCHHHHHHHTTCHHHHHHHHHTT--
T ss_pred CCCCcHH-HHHHHcCCHHHHHHHHHHHHhc---------CCCCC-----cccccCCCHHHHHHHcCCHHHHHHHHHcC--
Confidence 4567777 8999999999999999988653 34689 9999999999 999999999999999754
Q ss_pred CccccccccccCCCCccCCC
Q 025881 92 STEAMVNAKEAGEFAAVNVP 111 (247)
Q Consensus 92 ~~~v~vn~~N~~G~TALDI~ 111 (247)
.+++..|.+|.|||+.+
T Consensus 70 ---~~~~~~~~~g~t~l~~A 86 (241)
T 1k1a_A 70 ---ASPMALDRHGQTAAHLA 86 (241)
T ss_dssp ---CCTTCCCTTSCCHHHHH
T ss_pred ---CCccccCCCCCCHHHHH
Confidence 47889999999999994
No 12
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=98.43 E-value=1.4e-07 Score=84.13 Aligned_cols=87 Identities=11% Similarity=-0.018 Sum_probs=66.5
Q ss_pred hhHHHHHHHHhh----hcchhhHHHHHHHHHHHhhhcc-----------------------cccc---------cccccC
Q 025881 14 EGIAERKMVSDL----SNRIDDLKVDLEWYKEVSRLKN-----------------------KSYY---------DSFNNS 57 (247)
Q Consensus 14 ~~~~~~~~~~~~----~~~~ealk~Lv~~~~~~~~~~~-----------------------~~~~---------~~llN~ 57 (247)
+|.+-+ +.|++ +++.++++.|++........+. ++.. +.-+|
T Consensus 200 ~g~tpL-h~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~~~~n- 277 (327)
T 1sw6_A 200 MNRTIL-HHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLN- 277 (327)
T ss_dssp TCCCHH-HHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHHTTT-
T ss_pred CCCCHH-HHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHHHHHHHHhCCC-
Confidence 466666 77887 8899999999987653321110 0000 00289
Q ss_pred CCCCCCCCCCCcee-eeecccchHHHHHHhhcCCCCccccccccccCCCCccCCC
Q 025881 58 LGGAGKPLSSPVVL-ADMEHRQVKTVNSFLAETPESTEAMVNAKEAGEFAAVNVP 111 (247)
Q Consensus 58 ~~~~~kD~~GNTiL-LAv~~~~~kiv~~Ll~~~~~~~~v~vn~~N~~G~TALDI~ 111 (247)
.+|.+|+||| +|+..++.+++++|++.+ .++|++|++|.||||++
T Consensus 278 ----~~d~~G~TpLh~A~~~g~~~~v~~Ll~~G-----ad~~~~d~~G~TpL~~A 323 (327)
T 1sw6_A 278 ----AQDSNGDTCLNIAARLGNISIVDALLDYG-----ADPFIANKSGLRPVDFG 323 (327)
T ss_dssp ----CCCTTSCCHHHHHHHHCCHHHHHHHHHTT-----CCTTCCCTTSCCGGGGT
T ss_pred ----CCCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCCcccCCCCCCHHHHH
Confidence 9999999999 999999999999999763 58999999999999984
No 13
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=98.42 E-value=1.6e-07 Score=72.71 Aligned_cols=73 Identities=15% Similarity=0.089 Sum_probs=61.9
Q ss_pred hHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCCCCCcee-eeecccchHHHHHHhhcCCCCc
Q 025881 15 GIAERKMVSDLSNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLSSPVVL-ADMEHRQVKTVNSFLAETPEST 93 (247)
Q Consensus 15 ~~~~~~~~~~~~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~GNTiL-LAv~~~~~kiv~~Ll~~~~~~~ 93 (247)
|.+-+ +.|+++++.+.++.|++. ..-+| .+|.+|+||| .|+..++.+++++|++.+
T Consensus 47 g~t~L-~~A~~~~~~~~v~~Ll~~-------------g~~~~-----~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g---- 103 (136)
T 2jab_A 47 GLTPL-YLATAHGHLEIVEVLLKN-------------GADVN-----AVDAIGFTPLHLAAFIGHLEIAEVLLKHG---- 103 (136)
T ss_dssp SCCHH-HHHHHHTCHHHHHHHHHT-------------TCCTT-----CCCTTCCCHHHHHHHHTCHHHHHHHHHTT----
T ss_pred CCCHH-HHHHHcCCHHHHHHHHHc-------------CCCCC-----cCCCCCCCHHHHHHHcCCHHHHHHHHHcC----
Confidence 34445 789999999999988862 12378 9999999999 999999999999999753
Q ss_pred cccccccccCCCCccCCC
Q 025881 94 EAMVNAKEAGEFAAVNVP 111 (247)
Q Consensus 94 ~v~vn~~N~~G~TALDI~ 111 (247)
.++|..|.+|.||||++
T Consensus 104 -~~~~~~~~~g~tpl~~A 120 (136)
T 2jab_A 104 -ADVNAQDKFGKTAFDIS 120 (136)
T ss_dssp -CCTTCCCTTSCCHHHHH
T ss_pred -CCCcCcCCCCCCHHHHH
Confidence 58899999999999984
No 14
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=98.41 E-value=7.7e-08 Score=74.22 Aligned_cols=73 Identities=15% Similarity=0.091 Sum_probs=62.4
Q ss_pred hHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCCCCCcee-eeecccchHHHHHHhhcCCCCc
Q 025881 15 GIAERKMVSDLSNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLSSPVVL-ADMEHRQVKTVNSFLAETPEST 93 (247)
Q Consensus 15 ~~~~~~~~~~~~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~GNTiL-LAv~~~~~kiv~~Ll~~~~~~~ 93 (247)
|.+-+ +.|+++++.+.++.|++. ..-+| .+|.+|+||| +|+..++.+++++|++.+
T Consensus 43 g~t~L-~~A~~~~~~~~~~~Ll~~-------------g~~~~-----~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g---- 99 (137)
T 3c5r_A 43 GWTPL-HEACNHGHLKVVELLLQH-------------KALVN-----TTGYQNDSPLHDAAKNGHVDIVKLLLSYG---- 99 (137)
T ss_dssp SCCHH-HHHHHTTCHHHHHHHHHT-------------TCCTT-----CCCGGGCCHHHHHHHTTCHHHHHHHHHTT----
T ss_pred CCCHH-HHHHHcCCHHHHHHHHHc-------------CCccc-----CcCCCCCCHHHHHHHcCCHHHHHHHHHcC----
Confidence 44555 789999999999988762 12478 9999999999 999999999999999753
Q ss_pred cccccccccCCCCccCCC
Q 025881 94 EAMVNAKEAGEFAAVNVP 111 (247)
Q Consensus 94 ~v~vn~~N~~G~TALDI~ 111 (247)
.++|.+|.+|.||||++
T Consensus 100 -a~~~~~~~~g~tpl~~A 116 (137)
T 3c5r_A 100 -ASRNAVNIFGLRPVDYT 116 (137)
T ss_dssp -CCTTCCCTTSCCGGGGC
T ss_pred -CCCCCCCCCCCCHHHHH
Confidence 58899999999999996
No 15
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=98.39 E-value=8.6e-08 Score=81.30 Aligned_cols=78 Identities=17% Similarity=0.099 Sum_probs=67.0
Q ss_pred hhhHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCCCCCcee-eeecccchHHHHHHhhcCCC
Q 025881 13 EEGIAERKMVSDLSNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLSSPVVL-ADMEHRQVKTVNSFLAETPE 91 (247)
Q Consensus 13 ~~~~~~~~~~~~~~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~GNTiL-LAv~~~~~kiv~~Ll~~~~~ 91 (247)
.+|.+-+ +.|+++|+.+.++.|++.-. ....+| .+|.+|+||| +|+..++.+++++|++.+
T Consensus 7 ~~g~t~L-~~A~~~g~~~~v~~Ll~~g~----------~~~~~~-----~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-- 68 (282)
T 1oy3_D 7 EDGDTAL-HLAVIHQHEPFLDFLLGFSA----------GHEYLD-----LQNDLGQTALHLAAILGEASTVEKLYAAG-- 68 (282)
T ss_dssp TTCCCHH-HHHHHTTCHHHHHHHHHHHT----------TSGGGG-----CCCTTSCCHHHHHHHHTCHHHHHHHHHTT--
T ss_pred CCCCcHH-HHHHHcCCHHHHHHHHhcCC----------Cccccc-----ccCCCCCCHHHHHHHcCCHHHHHHHHHcC--
Confidence 3567777 89999999999999987532 234689 9999999999 999999999999999864
Q ss_pred CccccccccccCCCCccCCC
Q 025881 92 STEAMVNAKEAGEFAAVNVP 111 (247)
Q Consensus 92 ~~~v~vn~~N~~G~TALDI~ 111 (247)
.++|..|..|.|||+++
T Consensus 69 ---a~~~~~~~~g~tpL~~A 85 (282)
T 1oy3_D 69 ---AGVLVAERGGHTALHLA 85 (282)
T ss_dssp ---CCSSCCCTTSCCHHHHH
T ss_pred ---CCCCCCCCCCCCHHHHH
Confidence 58899999999999994
No 16
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=98.39 E-value=1.5e-07 Score=80.99 Aligned_cols=74 Identities=15% Similarity=0.021 Sum_probs=64.0
Q ss_pred hhHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCCCCCcee-eeecccchHHHHHHhhcCCCC
Q 025881 14 EGIAERKMVSDLSNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLSSPVVL-ADMEHRQVKTVNSFLAETPES 92 (247)
Q Consensus 14 ~~~~~~~~~~~~~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~GNTiL-LAv~~~~~kiv~~Ll~~~~~~ 92 (247)
+|.+-+ +.|+.+++.++++.|++. ..-+| .+|.+|+||| +|+..++.+++++|+..+
T Consensus 198 ~g~t~L-~~A~~~g~~~~v~~Ll~~-------------g~d~~-----~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g--- 255 (299)
T 1s70_B 198 SGGTAL-HVAAAKGYTEVLKLLIQA-------------RYDVN-----IKDYDGWTPLHAAAHWGKEEACRILVENL--- 255 (299)
T ss_dssp TCCCHH-HHHHHHTCHHHHHHHHTT-------------TCCTT-----CCCTTCCCHHHHHHHTTCHHHHHHHHHTT---
T ss_pred CCCCHH-HHHHHCCcHHHHHHHHHc-------------CCCCC-----CcCCCCCcHHHHHHhcCCHHHHHHHHHcC---
Confidence 466777 899999999999988752 12378 9999999999 999999999999999864
Q ss_pred ccccccccccCCCCccCCC
Q 025881 93 TEAMVNAKEAGEFAAVNVP 111 (247)
Q Consensus 93 ~~v~vn~~N~~G~TALDI~ 111 (247)
.++|++|+.|.||||++
T Consensus 256 --ad~~~~d~~g~t~l~~A 272 (299)
T 1s70_B 256 --CDMEAVNKVGQTAFDVA 272 (299)
T ss_dssp --CCTTCCCTTSCCTTTSC
T ss_pred --CCCCCcCCCCCCHHHHH
Confidence 58899999999999996
No 17
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=98.39 E-value=1.2e-07 Score=78.76 Aligned_cols=45 Identities=13% Similarity=0.088 Sum_probs=29.1
Q ss_pred CCCCCCCcee-eeecccchHHHHHHhhcCCCCccccccccccCCCCccCCC
Q 025881 62 GKPLSSPVVL-ADMEHRQVKTVNSFLAETPESTEAMVNAKEAGEFAAVNVP 111 (247)
Q Consensus 62 ~kD~~GNTiL-LAv~~~~~kiv~~Ll~~~~~~~~v~vn~~N~~G~TALDI~ 111 (247)
.+|.+|+||| +|+..++.+++++|++.+ .++|.+|..|.||||++
T Consensus 178 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----a~~~~~~~~g~tpl~~A 223 (241)
T 1k1a_A 178 AQMYSGSSALHSASGRGLLPLVRTLVRSG-----ADSSLKNCHNDTPLMVA 223 (241)
T ss_dssp CBCTTSCBHHHHHHHHTCHHHHHHHHHTT-----CCTTCCCTTSCCTTTTC
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHhcC-----CCCCCcCCCCCCHHHHH
Confidence 6666666666 666666666666666542 35666666666666664
No 18
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=98.38 E-value=1.6e-07 Score=75.62 Aligned_cols=74 Identities=14% Similarity=0.032 Sum_probs=52.0
Q ss_pred hhHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCCCCCcee-eeecccchHHHHHHhhcCCCC
Q 025881 14 EGIAERKMVSDLSNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLSSPVVL-ADMEHRQVKTVNSFLAETPES 92 (247)
Q Consensus 14 ~~~~~~~~~~~~~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~GNTiL-LAv~~~~~kiv~~Ll~~~~~~ 92 (247)
+|.+.+ +.|+++++.+.++.|++. ..-+| .+|.+|+||| +|+..++.+++++|++.+
T Consensus 38 ~g~t~L-~~A~~~~~~~~v~~Ll~~-------------g~~~~-----~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g--- 95 (179)
T 3f6q_A 38 HGFSPL-HWACREGRSAVVEMLIMR-------------GARIN-----VMNRGDDTPLHLAASHGHRDIVQKLLQYK--- 95 (179)
T ss_dssp TSCCHH-HHHHHTTCHHHHHHHHHT-------------TCCTT-----CCCTTCCCHHHHHHHTTCHHHHHHHHHTT---
T ss_pred CCCCHH-HHHHHcCcHHHHHHHHHc-------------CCCCC-----CcCCCCCCHHHHHHHcCCHHHHHHHHHcC---
Confidence 456666 778888888887777652 11256 7777777777 777777777777777643
Q ss_pred ccccccccccCCCCccCCC
Q 025881 93 TEAMVNAKEAGEFAAVNVP 111 (247)
Q Consensus 93 ~~v~vn~~N~~G~TALDI~ 111 (247)
.++|..|..|.|||+++
T Consensus 96 --~~~~~~d~~g~t~L~~A 112 (179)
T 3f6q_A 96 --ADINAVNEHGNVPLHYA 112 (179)
T ss_dssp --CCTTCCCTTSCCHHHHH
T ss_pred --CCCCccCCCCCCHHHHH
Confidence 46777777777777773
No 19
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=98.38 E-value=1.1e-07 Score=71.01 Aligned_cols=72 Identities=19% Similarity=0.191 Sum_probs=48.6
Q ss_pred hHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCCCCCcee-eeecccchHHHHHHhhcCCCCc
Q 025881 15 GIAERKMVSDLSNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLSSPVVL-ADMEHRQVKTVNSFLAETPEST 93 (247)
Q Consensus 15 ~~~~~~~~~~~~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~GNTiL-LAv~~~~~kiv~~Ll~~~~~~~ 93 (247)
|.+.+ +.|+++++.+.++.|++. . .-+| .+|.+|+||| .|+..++.+++++|+..+
T Consensus 2 g~t~L-~~A~~~~~~~~v~~Ll~~----~---------~~~~-----~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g---- 58 (126)
T 1n0r_A 2 GRTPL-HLAARNGHLEVVKLLLEA----G---------ADVN-----AKDKNGRTPLHLAARNGHLEVVKLLLEAG---- 58 (126)
T ss_dssp CCCHH-HHHHHHTCHHHHHHHHHH----T---------CCTT-----CCCTTSCCHHHHHHHHTCHHHHHHHHHTT----
T ss_pred CccHH-HHHHHcCcHHHHHHHHHc----C---------CCCC-----CcCCCCCcHHHHHHHcCcHHHHHHHHHcC----
Confidence 44445 677777777777776652 1 1256 6777777777 777777777777777643
Q ss_pred cccccccccCCCCccCC
Q 025881 94 EAMVNAKEAGEFAAVNV 110 (247)
Q Consensus 94 ~v~vn~~N~~G~TALDI 110 (247)
.+++..|..|.|||++
T Consensus 59 -~~~~~~~~~g~t~l~~ 74 (126)
T 1n0r_A 59 -ADVNAKDKNGRTPLHL 74 (126)
T ss_dssp -CCTTCCCTTSCCHHHH
T ss_pred -CCCcccCCCCCcHHHH
Confidence 3667777777777777
No 20
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=98.37 E-value=9.1e-08 Score=84.26 Aligned_cols=75 Identities=7% Similarity=-0.000 Sum_probs=64.9
Q ss_pred hhhHHHHHHHHhhh---cchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCCCCCcee-eeecccchHHHHHHhhc
Q 025881 13 EEGIAERKMVSDLS---NRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLSSPVVL-ADMEHRQVKTVNSFLAE 88 (247)
Q Consensus 13 ~~~~~~~~~~~~~~---~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~GNTiL-LAv~~~~~kiv~~Ll~~ 88 (247)
.+|.+-+ +.|+++ ++.+++++|++. ..-+| .+|.+|+||| +|+..++.+++++|++.
T Consensus 167 ~~g~t~L-h~A~~~~~~~~~~~v~~Ll~~-------------ga~in-----~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ 227 (278)
T 1dcq_A 167 EPDETAL-HLAVRSVDRTSLHIVDFLVQN-------------SGNLD-----KQTGKGSTALHYCCLTDNAECLKLLLRG 227 (278)
T ss_dssp STTCBHH-HHHHHHCCTTTHHHHHHHHHH-------------CSCTT-----CCCTTCCCHHHHHHHTTCHHHHHHHHHT
T ss_pred cCCCCcc-hHHHHhcccchHHHHHHHHHC-------------CCCcc-----ccCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 3577888 899999 899999988863 12388 9999999999 99999999999999985
Q ss_pred CCCCccccccccccCCCCccCCC
Q 025881 89 TPESTEAMVNAKEAGEFAAVNVP 111 (247)
Q Consensus 89 ~~~~~~v~vn~~N~~G~TALDI~ 111 (247)
+ .++|++|++|.||||++
T Consensus 228 g-----ad~~~~d~~g~tpL~~A 245 (278)
T 1dcq_A 228 K-----ASIEIANESGETPLDIA 245 (278)
T ss_dssp T-----CCTTCCCTTSCCHHHHH
T ss_pred C-----CCCCCccCCCCCHHHHH
Confidence 3 58999999999999995
No 21
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=98.37 E-value=1.1e-07 Score=80.52 Aligned_cols=75 Identities=12% Similarity=0.038 Sum_probs=61.1
Q ss_pred hhhHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCC-CCCcee-eeecccchHHHHHHhhcCC
Q 025881 13 EEGIAERKMVSDLSNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPL-SSPVVL-ADMEHRQVKTVNSFLAETP 90 (247)
Q Consensus 13 ~~~~~~~~~~~~~~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~-~GNTiL-LAv~~~~~kiv~~Ll~~~~ 90 (247)
.+|.+-+ +.|+++++.++++.|++.= .-+| .+|. +|+||| +|+..++.+++++|+..+
T Consensus 156 ~~g~t~L-~~A~~~g~~~~v~~Ll~~g-------------~~~~-----~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~g- 215 (282)
T 1oy3_D 156 YDGHTPL-HVAVIHKDAEMVRLLRDAG-------------ADLN-----KPEPTCGRTPLHLAVEAQAASVLELLLKAG- 215 (282)
T ss_dssp TTSCCHH-HHHHHTTCHHHHHHHHHHT-------------CCTT-----CCCTTTCCCHHHHHHHTTCHHHHHHHHHTT-
T ss_pred CCCcCHH-HHHHHcCCHHHHHHHHHcC-------------CCCC-----CCCCCCCcCHHHHHHHcCCHHHHHHHHHcC-
Confidence 3677888 8999999999999988621 1356 6664 599999 999999999999999753
Q ss_pred CCccccccccccCCCCccCCC
Q 025881 91 ESTEAMVNAKEAGEFAAVNVP 111 (247)
Q Consensus 91 ~~~~v~vn~~N~~G~TALDI~ 111 (247)
.++|.+|..|.|||+++
T Consensus 216 ----ad~~~~d~~g~tpL~~A 232 (282)
T 1oy3_D 216 ----ADPTARMYGGRTPLGSA 232 (282)
T ss_dssp ----CCTTCCCTTSCCHHHHH
T ss_pred ----CCCcccccCCCCHHHHH
Confidence 58899999999999994
No 22
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=98.36 E-value=9.7e-08 Score=75.01 Aligned_cols=75 Identities=16% Similarity=0.102 Sum_probs=61.8
Q ss_pred hhhHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCCCCCcee-eeecccchHHHHHHhhcCCC
Q 025881 13 EEGIAERKMVSDLSNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLSSPVVL-ADMEHRQVKTVNSFLAETPE 91 (247)
Q Consensus 13 ~~~~~~~~~~~~~~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~GNTiL-LAv~~~~~kiv~~Ll~~~~~ 91 (247)
.+|.+.+ +.|+++++.+.++.|++. ..-+| .+|.+|+||| .|+..++.+++++|++.+
T Consensus 32 ~~g~t~L-~~A~~~~~~~~v~~Ll~~-------------g~~~~-----~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-- 90 (153)
T 1awc_B 32 WLGTSPL-HLAAQYGHFSTTEVLLRA-------------GVSRD-----ARTKVDRTPLHMAASEGHANIVEVLLKHG-- 90 (153)
T ss_dssp TTCCCHH-HHHHHHTCHHHHHHHHTT-------------TCCTT-----CCCTTCCCHHHHHHHHTCHHHHHHHHTTT--
T ss_pred CCCCCHH-HHHHHcCCHHHHHHHHHc-------------CCCCC-----CCCCCCCCHHHHHHHcChHHHHHHHHHcC--
Confidence 3567777 889999999999888752 12367 8999999999 999999999999999753
Q ss_pred CccccccccccCCCCccCCC
Q 025881 92 STEAMVNAKEAGEFAAVNVP 111 (247)
Q Consensus 92 ~~~v~vn~~N~~G~TALDI~ 111 (247)
.++|..|..|.|||+++
T Consensus 91 ---~~~~~~~~~g~t~L~~A 107 (153)
T 1awc_B 91 ---ADVNAKDMLKMTALHWA 107 (153)
T ss_dssp ---CCTTCCCTTSCCHHHHH
T ss_pred ---CCCCCCCCCCCCHHHHH
Confidence 58899999999999994
No 23
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=98.35 E-value=1.1e-07 Score=77.39 Aligned_cols=75 Identities=13% Similarity=0.034 Sum_probs=64.3
Q ss_pred hhhhHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCCCCCcee-eeecccchHHHHHHhhcCC
Q 025881 12 LEEGIAERKMVSDLSNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLSSPVVL-ADMEHRQVKTVNSFLAETP 90 (247)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~GNTiL-LAv~~~~~kiv~~Ll~~~~ 90 (247)
-.+|.+-+ +.|+++++.+.++.|++ . . -+| .+|.+|+||| +|+..++.+++++|+..+
T Consensus 41 ~~~g~t~L-~~A~~~g~~~~v~~Ll~--~-~-----------~~~-----~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g- 99 (183)
T 3deo_A 41 VSEYETPW-WTAARKADEQALSQLLE--D-R-----------DVD-----AVDENGRTALLFVAGLGSDKCVRLLAEAG- 99 (183)
T ss_dssp HHHHHHHH-HHHHHTTCHHHHHHHTT--T-S-----------CTT-----CCCTTSCCHHHHHHHHTCHHHHHHHHHTT-
T ss_pred CCCCCCHH-HHHHHcCCHHHHHHHHh--c-C-----------CCC-----CcCCCCCCHHHHHHHcCCHHHHHHHHHcC-
Confidence 46888888 89999999999999887 2 1 378 8999999999 999999999999999753
Q ss_pred CCccccccccc-cCCCCccCCC
Q 025881 91 ESTEAMVNAKE-AGEFAAVNVP 111 (247)
Q Consensus 91 ~~~~v~vn~~N-~~G~TALDI~ 111 (247)
.++|..| ..|.|||+++
T Consensus 100 ----a~~~~~~~~~g~tpL~~A 117 (183)
T 3deo_A 100 ----ADLDHRDMRGGLTALHMA 117 (183)
T ss_dssp ----CCTTCCCSSSSCCHHHHH
T ss_pred ----CCCCcCCCCCCCCHHHHH
Confidence 5788888 8899999994
No 24
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=98.35 E-value=1.6e-07 Score=77.56 Aligned_cols=75 Identities=9% Similarity=0.005 Sum_probs=52.1
Q ss_pred hhHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCCCCCcee-eeecccchHHHHHHhhcCCCC
Q 025881 14 EGIAERKMVSDLSNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLSSPVVL-ADMEHRQVKTVNSFLAETPES 92 (247)
Q Consensus 14 ~~~~~~~~~~~~~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~GNTiL-LAv~~~~~kiv~~Ll~~~~~~ 92 (247)
+|.+-+ +.|+++++.+.++.|++. ..-+| .+|.+|+||| .|+..++.+++++|++.+.
T Consensus 106 ~g~t~L-~~A~~~~~~~~~~~Ll~~-------------g~~~~-----~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-- 164 (228)
T 2dzn_A 106 QGVTCL-HLAVGKKWFEVSQFLIEN-------------GASVR-----IKDKFNQIPLHRAASVGSLKLIELLCGLGK-- 164 (228)
T ss_dssp TCCCHH-HHHHHTTCHHHHHHHHHT-------------TCCSC-----CCCTTSCCHHHHHHHTTCHHHHHHHHTTTC--
T ss_pred CCCCHH-HHHHHcCCHhHHHHHHHc-------------CCCcc-----ccCCCCCCHHHHHHHcCCHHHHHHHHhcCc--
Confidence 466666 678888888887777753 11256 7777777777 7777777777777776532
Q ss_pred ccccccccccCCCCccCCC
Q 025881 93 TEAMVNAKEAGEFAAVNVP 111 (247)
Q Consensus 93 ~~v~vn~~N~~G~TALDI~ 111 (247)
.++|..|..|.|||+++
T Consensus 165 --~~~~~~d~~g~t~L~~A 181 (228)
T 2dzn_A 165 --SAVNWQDKQGWTPLFHA 181 (228)
T ss_dssp --CCSCCCCTTSCCHHHHH
T ss_pred --ccccCcCCCCCCHHHHH
Confidence 36677777777777773
No 25
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=98.34 E-value=7.4e-08 Score=80.28 Aligned_cols=76 Identities=12% Similarity=-0.005 Sum_probs=59.9
Q ss_pred hhhHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCCCCCcee-eeecccchHHHHHHhhcCCC
Q 025881 13 EEGIAERKMVSDLSNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLSSPVVL-ADMEHRQVKTVNSFLAETPE 91 (247)
Q Consensus 13 ~~~~~~~~~~~~~~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~GNTiL-LAv~~~~~kiv~~Ll~~~~~ 91 (247)
++|.+-+ +.|+++|+++.++.|++. ..-+| .+|.+|+||| +|+..++.+++++|+...
T Consensus 71 ~~g~t~L-~~A~~~g~~~~v~~Ll~~-------------g~~~~-----~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~-- 129 (222)
T 3ehr_A 71 ESIDNPL-HEAAKRGNLSWLRECLDN-------------RVGVN-----GLDKAGSTALYWACHGGHKDIVEMLFTQP-- 129 (222)
T ss_dssp EEESCHH-HHHHHHTCHHHHHHHHHT-------------TCCTT-----CCCTTSCCHHHHHHHTTCHHHHHHHTTST--
T ss_pred ccccccc-ccccccCcHHHHHHHHhC-------------CCCcc-----ccCCCCCCHHHHHHHcCCHHHHHHHHcCC--
Confidence 4566777 888999999988888751 11377 8888999999 999999999999888652
Q ss_pred CccccccccccCCCCccCCC
Q 025881 92 STEAMVNAKEAGEFAAVNVP 111 (247)
Q Consensus 92 ~~~v~vn~~N~~G~TALDI~ 111 (247)
..++|..|..|.|||+++
T Consensus 130 --g~~~~~~d~~g~tpL~~A 147 (222)
T 3ehr_A 130 --NIELNQQNKLGDTALHAA 147 (222)
T ss_dssp --TCCCCCCCTTSCCHHHHH
T ss_pred --CCCccccCCCCCCHHHHH
Confidence 257888899999999884
No 26
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=98.33 E-value=1.3e-07 Score=82.42 Aligned_cols=74 Identities=19% Similarity=0.171 Sum_probs=50.9
Q ss_pred hHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCCCCCcee-eeecccchHHHHHHhhcCCCCc
Q 025881 15 GIAERKMVSDLSNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLSSPVVL-ADMEHRQVKTVNSFLAETPEST 93 (247)
Q Consensus 15 ~~~~~~~~~~~~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~GNTiL-LAv~~~~~kiv~~Ll~~~~~~~ 93 (247)
|.+-+ +.|+++|+.++++.|++. ..=+| .+|.+|+||| +|+..++.+++++|+...
T Consensus 183 g~tpL-h~A~~~g~~~~v~~Ll~~-------------gad~n-----~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~---- 239 (276)
T 4hbd_A 183 GQTAL-MLAVSHGRVDVVKALLAC-------------EADVN-----VQDDDGSTALMCACEHGHKEIAGLLLAVP---- 239 (276)
T ss_dssp CCCHH-HHHHHTTCHHHHHHHHHT-------------TCCTT-----CCCTTSCCHHHHHHHHTCHHHHHHHHTST----
T ss_pred CCCHH-HHHHHcCCHHHHHHHHhC-------------CCCCC-----CCCCCCCCHHHHHHHCCCHHHHHHHHhcC----
Confidence 55666 677777777777777652 11266 7777777777 777777777777777621
Q ss_pred cccccccccCCCCccCCC
Q 025881 94 EAMVNAKEAGEFAAVNVP 111 (247)
Q Consensus 94 ~v~vn~~N~~G~TALDI~ 111 (247)
+.++|..|++|.||||++
T Consensus 240 gad~~~~d~~g~TpL~~A 257 (276)
T 4hbd_A 240 SCDISLTDRDGSTALMVA 257 (276)
T ss_dssp TCCTTCCCTTSCCHHHHH
T ss_pred CCCCcCcCCCCCCHHHHH
Confidence 246777777777777773
No 27
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=98.33 E-value=1.3e-07 Score=74.04 Aligned_cols=73 Identities=12% Similarity=0.010 Sum_probs=57.2
Q ss_pred hhHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCCCCCcee-eeecccchHHHHHHhhcCCCC
Q 025881 14 EGIAERKMVSDLSNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLSSPVVL-ADMEHRQVKTVNSFLAETPES 92 (247)
Q Consensus 14 ~~~~~~~~~~~~~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~GNTiL-LAv~~~~~kiv~~Ll~~~~~~ 92 (247)
+|.+.+ +. +.+++.+.++.|++. ..-+| .+|.+|+||| .|+..++.+++++|++.+
T Consensus 35 ~g~t~L-~~-~~~~~~~~v~~Ll~~-------------g~~~~-----~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g--- 91 (156)
T 1bd8_A 35 FGKTAL-QV-MMFGSTAIALELLKQ-------------GASPN-----VQDTSGTSPVHDAARTGFLDTLKVLVEHG--- 91 (156)
T ss_dssp TSCCHH-HH-SCTTCHHHHHHHHHT-------------TCCTT-----CCCTTSCCHHHHHHHTTCHHHHHHHHHTT---
T ss_pred CCCcHH-HH-HHcCCHHHHHHHHHC-------------CCCCC-----CcCCCCCCHHHHHHHcCcHHHHHHHHHcC---
Confidence 467777 55 788888888887752 12367 8888999999 999999999999888753
Q ss_pred ccccccccccCCCCccCCC
Q 025881 93 TEAMVNAKEAGEFAAVNVP 111 (247)
Q Consensus 93 ~~v~vn~~N~~G~TALDI~ 111 (247)
.++|..|.+|.|||+++
T Consensus 92 --~~~~~~~~~g~t~L~~A 108 (156)
T 1bd8_A 92 --ADVNVPDGTGALPIHLA 108 (156)
T ss_dssp --CCSCCCCTTSCCHHHHH
T ss_pred --CCCCCcCCCCCcHHHHH
Confidence 57888888999999884
No 28
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=98.33 E-value=2.2e-07 Score=71.79 Aligned_cols=73 Identities=12% Similarity=0.012 Sum_probs=62.4
Q ss_pred hhHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCCCCCcee-eeecccchHHHHHHhhcCCCC
Q 025881 14 EGIAERKMVSDLSNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLSSPVVL-ADMEHRQVKTVNSFLAETPES 92 (247)
Q Consensus 14 ~~~~~~~~~~~~~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~GNTiL-LAv~~~~~kiv~~Ll~~~~~~ 92 (247)
+|.+.+ +.|+++++.+.++.|++. ..-+| .+|.+|+||| +|+. ++.+++++|++.+
T Consensus 11 ~g~t~L-~~A~~~~~~~~v~~Ll~~-------------g~~~~-----~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g--- 67 (136)
T 1d9s_A 11 SSDAGL-ATAAARGQVETVRQLLEA-------------GADPN-----ALNRFGRRPIQVMMM-GSAQVAELLLLHG--- 67 (136)
T ss_dssp CCSCHH-HHHHHTTCHHHHHHHHHT-------------TCCTT-----CCCTTCCTTTTTSTT-SCHHHHHHHHHHT---
T ss_pred CCccHH-HHHHHcCCHHHHHHHHHc-------------CCCcC-----CcCCCCCCHHHHHHc-CCHHHHHHHHHCC---
Confidence 466667 899999999999998863 12378 9999999999 9999 9999999999753
Q ss_pred ccccccccccC-CCCccCCC
Q 025881 93 TEAMVNAKEAG-EFAAVNVP 111 (247)
Q Consensus 93 ~~v~vn~~N~~-G~TALDI~ 111 (247)
.++|..|.. |.|||+.+
T Consensus 68 --~~~~~~~~~~g~t~L~~A 85 (136)
T 1d9s_A 68 --AEPNCADPATLTRPVHDA 85 (136)
T ss_dssp --CCSSCCBTTTTBCHHHHH
T ss_pred --CCCCCcCCCCCCCHHHHH
Confidence 588999999 99999984
No 29
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=98.33 E-value=8.2e-08 Score=79.98 Aligned_cols=74 Identities=14% Similarity=0.013 Sum_probs=63.5
Q ss_pred hHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCCCCCcee-eeecccchHHHHHHhhcCCCCc
Q 025881 15 GIAERKMVSDLSNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLSSPVVL-ADMEHRQVKTVNSFLAETPEST 93 (247)
Q Consensus 15 ~~~~~~~~~~~~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~GNTiL-LAv~~~~~kiv~~Ll~~~~~~~ 93 (247)
|.+-+ +.|+.+++.+++++|++.- ..-+| .+|.+|+||| +|+..++.+++++|+..+
T Consensus 106 g~t~L-~~A~~~~~~~~v~~Ll~~~------------g~~~~-----~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g---- 163 (222)
T 3ehr_A 106 GSTAL-YWACHGGHKDIVEMLFTQP------------NIELN-----QQNKLGDTALHAAAWKGYADIVQLLLAKG---- 163 (222)
T ss_dssp SCCHH-HHHHHTTCHHHHHHHTTST------------TCCCC-----CCCTTSCCHHHHHHHHTCHHHHHHHHHHT----
T ss_pred CCCHH-HHHHHcCCHHHHHHHHcCC------------CCCcc-----ccCCCCCCHHHHHHHcCCHHHHHHHHHcC----
Confidence 45556 8899999999999887631 23488 9999999999 999999999999999863
Q ss_pred cccccccccCCCCccCCC
Q 025881 94 EAMVNAKEAGEFAAVNVP 111 (247)
Q Consensus 94 ~v~vn~~N~~G~TALDI~ 111 (247)
.++|++|.+|.||||++
T Consensus 164 -a~~~~~~~~g~t~l~~A 180 (222)
T 3ehr_A 164 -ARTDLRNIEKKLAFDMA 180 (222)
T ss_dssp -CCSCCCCTTSCCHHHHC
T ss_pred -CCCccccCCCCCHHHHh
Confidence 58899999999999996
No 30
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=98.32 E-value=1.7e-07 Score=76.18 Aligned_cols=73 Identities=8% Similarity=0.022 Sum_probs=61.8
Q ss_pred hHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCC-CCCCcee-eeecccchHHHHHHhhcCCCC
Q 025881 15 GIAERKMVSDLSNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKP-LSSPVVL-ADMEHRQVKTVNSFLAETPES 92 (247)
Q Consensus 15 ~~~~~~~~~~~~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD-~~GNTiL-LAv~~~~~kiv~~Ll~~~~~~ 92 (247)
|.+-+ +.|+.+++.+.++.|++. ..-+| .+| .+|+||| +|+..++.+++++|+..+
T Consensus 76 g~t~L-~~A~~~~~~~~v~~Ll~~-------------ga~~~-----~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~g--- 133 (183)
T 3deo_A 76 GRTAL-LFVAGLGSDKCVRLLAEA-------------GADLD-----HRDMRGGLTALHMAAGYVRPEVVEALVELG--- 133 (183)
T ss_dssp SCCHH-HHHHHHTCHHHHHHHHHT-------------TCCTT-----CCCSSSSCCHHHHHHHTTCHHHHHHHHHHT---
T ss_pred CCCHH-HHHHHcCCHHHHHHHHHc-------------CCCCC-----cCCCCCCCCHHHHHHhcCcHHHHHHHHHcC---
Confidence 44556 889999999999988862 12367 777 9999999 999999999999999863
Q ss_pred ccccccccccCCCCccCCC
Q 025881 93 TEAMVNAKEAGEFAAVNVP 111 (247)
Q Consensus 93 ~~v~vn~~N~~G~TALDI~ 111 (247)
.++|.+|.+|.||||++
T Consensus 134 --a~~~~~d~~g~tpl~~A 150 (183)
T 3deo_A 134 --ADIEVEDERGLTALELA 150 (183)
T ss_dssp --CCTTCCCTTSCCHHHHH
T ss_pred --CCCcCCCCCCCCHHHHH
Confidence 58899999999999995
No 31
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=98.32 E-value=2.1e-07 Score=76.33 Aligned_cols=68 Identities=18% Similarity=0.128 Sum_probs=59.9
Q ss_pred HHHhhhcchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCCCCCcee-eeecccchHHHHHHhhcCCCCccccccc
Q 025881 21 MVSDLSNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLSSPVVL-ADMEHRQVKTVNSFLAETPESTEAMVNA 99 (247)
Q Consensus 21 ~~~~~~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~GNTiL-LAv~~~~~kiv~~Ll~~~~~~~~v~vn~ 99 (247)
+.|+++|+.|.+|.|++. + -=+| .+|.+|+||| .|+..++.+++++|+..+ .++|.
T Consensus 9 ~~Aa~~G~~~~v~~Ll~~-------G------advn-----~~d~~g~t~l~~a~~~~~~~~~~~ll~~g-----ad~~~ 65 (169)
T 4gpm_A 9 IEAAENGNKDRVKDLIEN-------G------ADVN-----ASDSDGRTPLHHAAENGHKEVVKLLISKG-----ADVNA 65 (169)
T ss_dssp HHHHHTTCHHHHHHHHHT-------T------CCTT-----CCCTTSCCHHHHHHHTTCHHHHHHHHHTT-----CCTTC
T ss_pred HHHHHcCCHHHHHHHHHC-------C------CCCC-----CcCCCCCCHHHHHHHcCCHHHHHHHHhcc-----cchhh
Confidence 789999999999999862 1 1278 9999999999 999999999999999753 58999
Q ss_pred cccCCCCccCCC
Q 025881 100 KEAGEFAAVNVP 111 (247)
Q Consensus 100 ~N~~G~TALDI~ 111 (247)
.|.+|.|||+++
T Consensus 66 ~d~~g~TpLh~A 77 (169)
T 4gpm_A 66 KDSDGRTPLHHA 77 (169)
T ss_dssp CCTTSCCHHHHH
T ss_pred hccCCCCHHHHH
Confidence 999999999994
No 32
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=98.32 E-value=3e-07 Score=78.34 Aligned_cols=78 Identities=8% Similarity=0.067 Sum_probs=63.6
Q ss_pred hhhhhhHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCCCCCcee-eeecccchHHHHHHhhc
Q 025881 10 SELEEGIAERKMVSDLSNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLSSPVVL-ADMEHRQVKTVNSFLAE 88 (247)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~GNTiL-LAv~~~~~kiv~~Ll~~ 88 (247)
..-.+|.+.+ +.|+++|+.+.++.|++.= .-+| .+|.+|+||| +|+..++.+++++|++.
T Consensus 16 ~~~~~~~t~L-~~A~~~g~~~~v~~Ll~~g-------------~~~~-----~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ 76 (229)
T 2vge_A 16 RARLNPLVLL-LDAALTGELEVVQQAVKEM-------------NDPS-----QPNEEGITALHNAICGANYSIVDFLITA 76 (229)
T ss_dssp CTTSCHHHHH-HHHHHHTCHHHHHHHHHHS-------------SCTT-----CCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred ccccchhHHH-HHHHHcCCHHHHHHHHhcC-------------CCCC-----CCCCCCCCHHHHHHHcCCHHHHHHHHHC
Confidence 4445677777 8899999999999988621 1368 8899999999 99999999999999975
Q ss_pred CCCCccccccccccCCCCccCCC
Q 025881 89 TPESTEAMVNAKEAGEFAAVNVP 111 (247)
Q Consensus 89 ~~~~~~v~vn~~N~~G~TALDI~ 111 (247)
+ .++|..|..|.|||+++
T Consensus 77 g-----a~~n~~d~~g~tpLh~A 94 (229)
T 2vge_A 77 G-----ANVNSPDSHGWTPLHCA 94 (229)
T ss_dssp T-----CCTTCCCTTCCCHHHHH
T ss_pred C-----CCCCCCCCCCCCHHHHH
Confidence 3 58889999999999984
No 33
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=98.31 E-value=1.2e-07 Score=78.78 Aligned_cols=87 Identities=11% Similarity=0.045 Sum_probs=63.2
Q ss_pred hhHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCCCCCcee-eeecccchHHHHHHhhcCCCC
Q 025881 14 EGIAERKMVSDLSNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLSSPVVL-ADMEHRQVKTVNSFLAETPES 92 (247)
Q Consensus 14 ~~~~~~~~~~~~~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~GNTiL-LAv~~~~~kiv~~Ll~~~~~~ 92 (247)
+|.+-+ +.|+++++.|.++.|++.--..+.+........-.+ .+|.+|+||| +|+..++.+++++|++.+
T Consensus 74 ~g~t~L-~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~-----~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g--- 144 (232)
T 2rfa_A 74 EGQTAL-HIAVINQNVNLVRALLARGASVSARATGSVFHYRPH-----NLIYYGEHPLSFAACVGSEEIVRLLIEHG--- 144 (232)
T ss_dssp TTCCHH-HHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTT-----CSCCCCSSHHHHHHHHTCHHHHHHHHHTT---
T ss_pred CCcCHH-HHHHHcCCHHHHHHHHhCCCCCCcccCCcceeeccc-----ccccCCCCHHHHHHHcCCHHHHHHHHHCC---
Confidence 566666 778888888888887764222221111111222344 5677999999 999999999999999753
Q ss_pred ccccccccccCCCCccCCC
Q 025881 93 TEAMVNAKEAGEFAAVNVP 111 (247)
Q Consensus 93 ~~v~vn~~N~~G~TALDI~ 111 (247)
.++|..|.+|.|||+++
T Consensus 145 --a~~~~~d~~g~t~L~~A 161 (232)
T 2rfa_A 145 --ADIRAQDSLGNTVLHIL 161 (232)
T ss_dssp --CCTTCCCTTSCCHHHHH
T ss_pred --CCCCCCCCCCCCHHHHH
Confidence 58999999999999994
No 34
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=98.30 E-value=1.7e-07 Score=69.93 Aligned_cols=68 Identities=19% Similarity=0.192 Sum_probs=58.8
Q ss_pred HHHhhhcchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCCCCCcee-eeecccchHHHHHHhhcCCCCccccccc
Q 025881 21 MVSDLSNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLSSPVVL-ADMEHRQVKTVNSFLAETPESTEAMVNA 99 (247)
Q Consensus 21 ~~~~~~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~GNTiL-LAv~~~~~kiv~~Ll~~~~~~~~v~vn~ 99 (247)
+.|+++++.+.++.|++. ..-+| .+|.+|+||| +|+..++.+++++|++.+ .+++.
T Consensus 40 ~~A~~~~~~~~~~~Ll~~-------------g~~~~-----~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g-----~~~~~ 96 (126)
T 1n0r_A 40 HLAARNGHLEVVKLLLEA-------------GADVN-----AKDKNGRTPLHLAARNGHLEVVKLLLEAG-----ADVNA 96 (126)
T ss_dssp HHHHHHTCHHHHHHHHHT-------------TCCTT-----CCCTTSCCHHHHHHHTTCHHHHHHHHHTT-----CCTTC
T ss_pred HHHHHcCcHHHHHHHHHc-------------CCCCc-----ccCCCCCcHHHHHHHcChHHHHHHHHHcC-----CCCcc
Confidence 689999999999888762 12378 8999999999 999999999999999753 58899
Q ss_pred cccCCCCccCCC
Q 025881 100 KEAGEFAAVNVP 111 (247)
Q Consensus 100 ~N~~G~TALDI~ 111 (247)
.|.+|.||||++
T Consensus 97 ~~~~g~t~l~~A 108 (126)
T 1n0r_A 97 KDKNGRTPLHLA 108 (126)
T ss_dssp CCTTSCCHHHHH
T ss_pred cCCCCCCHHHHH
Confidence 999999999984
No 35
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=98.29 E-value=1.9e-07 Score=73.40 Aligned_cols=73 Identities=15% Similarity=0.050 Sum_probs=52.0
Q ss_pred hhHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCCCCCcee-eeecccchHHHHHHhhcCCCC
Q 025881 14 EGIAERKMVSDLSNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLSSPVVL-ADMEHRQVKTVNSFLAETPES 92 (247)
Q Consensus 14 ~~~~~~~~~~~~~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~GNTiL-LAv~~~~~kiv~~Ll~~~~~~ 92 (247)
+|.+-+ +.|+. ++.+.++.|++. ..-+| .+|.+|+||| .|+..++.+++++|+..+
T Consensus 37 ~g~t~L-~~A~~-~~~~~v~~Ll~~-------------g~~~~-----~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g--- 93 (162)
T 1ihb_A 37 FGRTAL-QVMKL-GNPEIARRLLLR-------------GANPD-----LKDRTGFAVIHDAARAGFLDTLQTLLEFQ--- 93 (162)
T ss_dssp TSCCHH-HHCCS-SCHHHHHHHHHT-------------TCCTT-----CCCTTSCCHHHHHHHHTCHHHHHHHHHTT---
T ss_pred cCccHH-HHHHc-CcHHHHHHHHHc-------------CCCCC-----CCCCCCCCHHHHHHHcCCHHHHHHHHHcC---
Confidence 455666 66777 788877777652 11356 7778888888 888888888888887643
Q ss_pred ccccccccccCCCCccCCC
Q 025881 93 TEAMVNAKEAGEFAAVNVP 111 (247)
Q Consensus 93 ~~v~vn~~N~~G~TALDI~ 111 (247)
.++|..|.+|.|||+++
T Consensus 94 --~~~~~~~~~g~t~L~~A 110 (162)
T 1ihb_A 94 --ADVNIEDNEGNLPLHLA 110 (162)
T ss_dssp --CCTTCCCTTSCCHHHHH
T ss_pred --CCCCCcCCCCCCHHHHH
Confidence 47777888888888873
No 36
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=98.28 E-value=3.1e-07 Score=72.65 Aligned_cols=76 Identities=14% Similarity=0.080 Sum_probs=64.7
Q ss_pred hhhHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCCCCCcee-eeecccchHHHHHHhhcCCC
Q 025881 13 EEGIAERKMVSDLSNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLSSPVVL-ADMEHRQVKTVNSFLAETPE 91 (247)
Q Consensus 13 ~~~~~~~~~~~~~~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~GNTiL-LAv~~~~~kiv~~Ll~~~~~ 91 (247)
.+|.+.+ ..|+++|+.+.++.|++.- ..-++ .+|.+|+||| +|+..++.+++++|+..+
T Consensus 6 ~~~~~~l-~~A~~~g~~~~v~~ll~~~------------~~~~~-----~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-- 65 (165)
T 3twr_A 6 SEADRQL-LEAAKAGDVETVKKLCTVQ------------SVNCR-----DIEGRQSTPLHFAAGYNRVSVVEYLLQHG-- 65 (165)
T ss_dssp CHHHHHH-HHHHHHTCHHHHHHHCCTT------------TTTCC-----CTTTTCCCHHHHHHHTTCHHHHHHHHHTT--
T ss_pred chhhHHH-HHHHHhCCHHHHHHHHHcC------------CCCcc-----ccccCCCCHHHHHHHcChHHHHHHHHhcC--
Confidence 4677777 8899999999999887531 23567 8899999999 999999999999999863
Q ss_pred CccccccccccCCCCccCCC
Q 025881 92 STEAMVNAKEAGEFAAVNVP 111 (247)
Q Consensus 92 ~~~v~vn~~N~~G~TALDI~ 111 (247)
.++|..|.+|.|||+++
T Consensus 66 ---~~~~~~~~~g~t~L~~A 82 (165)
T 3twr_A 66 ---ADVHAKDKGGLVPLHNA 82 (165)
T ss_dssp ---CCTTCCCTTSCCHHHHH
T ss_pred ---CCCCccCCCCCCHHHHH
Confidence 58899999999999994
No 37
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=98.27 E-value=2e-07 Score=74.25 Aligned_cols=75 Identities=13% Similarity=0.084 Sum_probs=61.0
Q ss_pred hhhHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCCCCCcee-eeecccchHHHHHHhhcCCC
Q 025881 13 EEGIAERKMVSDLSNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLSSPVVL-ADMEHRQVKTVNSFLAETPE 91 (247)
Q Consensus 13 ~~~~~~~~~~~~~~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~GNTiL-LAv~~~~~kiv~~Ll~~~~~ 91 (247)
.+|.+-+ +.|+++++.|.++.|++.= .-+| .+|.+|+||| +|+..++.+++++|+..+
T Consensus 34 ~~g~t~L-~~A~~~~~~~~v~~Ll~~g-------------~~~~-----~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-- 92 (172)
T 3v30_A 34 ERGFTPL-IWASAFGEIETVRFLLEWG-------------ADPH-----ILAKERESALSLASTGGYTDIVGLLLERD-- 92 (172)
T ss_dssp TTSCCHH-HHHHHTTCHHHHHHHHHHT-------------CCTT-----CCCTTCCCHHHHHHHTTCHHHHHHHHTTT--
T ss_pred CCCCCHH-HHHHHcCCHHHHHHHHHcC-------------CCch-----hhcccCCCHHHHHHHCCCHHHHHHHHHcC--
Confidence 3577777 8899999999999888631 1367 8888999999 999999999999988653
Q ss_pred CccccccccccCCCCccCCC
Q 025881 92 STEAMVNAKEAGEFAAVNVP 111 (247)
Q Consensus 92 ~~~v~vn~~N~~G~TALDI~ 111 (247)
.++|..|..|.|||+++
T Consensus 93 ---~~~~~~~~~g~t~L~~A 109 (172)
T 3v30_A 93 ---VDINIYDWNGGTPLLYA 109 (172)
T ss_dssp ---CCTTCCCTTSCCHHHHH
T ss_pred ---CCCCCCCCCCCCHHHHH
Confidence 57888899999999884
No 38
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=98.26 E-value=1.7e-07 Score=83.45 Aligned_cols=75 Identities=9% Similarity=-0.002 Sum_probs=64.1
Q ss_pred hhhHHHHHHHHhhh---cchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCCCCCcee-eeecccchHHHHHHhhc
Q 025881 13 EEGIAERKMVSDLS---NRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLSSPVVL-ADMEHRQVKTVNSFLAE 88 (247)
Q Consensus 13 ~~~~~~~~~~~~~~---~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~GNTiL-LAv~~~~~kiv~~Ll~~ 88 (247)
.+|.+.+ ++|+++ ++.+++++|++.= .-+| .+|.+|+||| +|+..++.+++++|++.
T Consensus 188 ~~g~t~L-h~A~~~~~~~~~~iv~~Ll~~g-------------advn-----~~d~~G~TpLh~A~~~g~~~~v~~Ll~~ 248 (301)
T 2b0o_E 188 APEELVL-HLAVKVANQASLPLVDFIIQNG-------------GHLD-----AKAADGNTALHYAALYNQPDCLKLLLKG 248 (301)
T ss_dssp SCEECHH-HHHHHTCCTTTHHHHHHHHHHS-------------SCTT-----CCCTTCCCHHHHHHHTTCHHHHHHHHHT
T ss_pred CCCccHH-HHHHHhcccCcHHHHHHHHhcC-------------CCCC-----CCCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 4577777 889987 8899988888631 1378 9999999999 99999999999999985
Q ss_pred CCCCccccccccccCCCCccCCC
Q 025881 89 TPESTEAMVNAKEAGEFAAVNVP 111 (247)
Q Consensus 89 ~~~~~~v~vn~~N~~G~TALDI~ 111 (247)
+ .++|++|.+|.||||++
T Consensus 249 g-----ad~~~~d~~G~TpL~~A 266 (301)
T 2b0o_E 249 R-----ALVGTVNEAGETALDIA 266 (301)
T ss_dssp T-----CCCSCCCTTSCCHHHHH
T ss_pred C-----CCCCCcCCCCCCHHHHH
Confidence 3 58999999999999995
No 39
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=98.26 E-value=2.8e-07 Score=73.72 Aligned_cols=75 Identities=15% Similarity=0.144 Sum_probs=62.4
Q ss_pred hhhHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCCCCCcee-eeecccchHHHHHHhhcCCC
Q 025881 13 EEGIAERKMVSDLSNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLSSPVVL-ADMEHRQVKTVNSFLAETPE 91 (247)
Q Consensus 13 ~~~~~~~~~~~~~~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~GNTiL-LAv~~~~~kiv~~Ll~~~~~ 91 (247)
.+|.+.+ +.|+++++.+.++.|++. ..-+| .+|.+|+||| .|+..++.+++++|++.+
T Consensus 45 ~~g~t~L-~~A~~~~~~~~v~~Ll~~-------------g~~~~-----~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-- 103 (169)
T 2y1l_E 45 ASGWTPL-HLAAFNGHLEIVEVLLKN-------------GADVN-----AVDHAGMTPLRLAALFGHLEIVEVLLKNG-- 103 (169)
T ss_dssp TTSCCHH-HHHHHTTCHHHHHHHHHT-------------TCCTT-----CCCTTSCCHHHHHHHTTCHHHHHHHHHTT--
T ss_pred CCCCCHH-HHHHHcCCHHHHHHHHHc-------------CCCCC-----ccCCCCCCHHHHHHHcCCHHHHHHHHHcC--
Confidence 3577777 889999999999888762 12367 8999999999 999999999999999753
Q ss_pred CccccccccccCCCCccCCC
Q 025881 92 STEAMVNAKEAGEFAAVNVP 111 (247)
Q Consensus 92 ~~~v~vn~~N~~G~TALDI~ 111 (247)
.++|..|.+|.|||+++
T Consensus 104 ---~~~~~~~~~g~t~L~~A 120 (169)
T 2y1l_E 104 ---ADVNANDMEGHTPLHLA 120 (169)
T ss_dssp ---CCTTCCCTTSCCHHHHH
T ss_pred ---CCCCCCCCCCCCHHHHH
Confidence 57889999999999994
No 40
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=98.26 E-value=2.6e-07 Score=72.50 Aligned_cols=71 Identities=7% Similarity=-0.003 Sum_probs=58.5
Q ss_pred HHHHHHHHhhhcchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCCCCCcee-eeecccchHHHHHHhhcCCCCcc
Q 025881 16 IAERKMVSDLSNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLSSPVVL-ADMEHRQVKTVNSFLAETPESTE 94 (247)
Q Consensus 16 ~~~~~~~~~~~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~GNTiL-LAv~~~~~kiv~~Ll~~~~~~~~ 94 (247)
.+.+ +.|+++|+.+.++.|++-- . -+ .+|.+|+||| .|+..++.+++++|++.+
T Consensus 3 ~~~L-~~A~~~g~~~~v~~Ll~~g------------~-~~------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g----- 57 (153)
T 1awc_B 3 GKKL-LEAARAGQDDEVRILMANG------------A-PF------TTDWLGTSPLHLAAQYGHFSTTEVLLRAG----- 57 (153)
T ss_dssp HHHH-HHHHHHTCHHHHHHHHHHT------------C-CC------CCCTTCCCHHHHHHHHTCHHHHHHHHTTT-----
T ss_pred cHHH-HHHHHcCCHHHHHHHHHcC------------C-CC------CcCCCCCCHHHHHHHcCCHHHHHHHHHcC-----
Confidence 3445 7899999999999888621 0 12 3589999999 999999999999999753
Q ss_pred ccccccccCCCCccCCC
Q 025881 95 AMVNAKEAGEFAAVNVP 111 (247)
Q Consensus 95 v~vn~~N~~G~TALDI~ 111 (247)
.++|..|..|.|||+++
T Consensus 58 ~~~~~~~~~g~t~L~~A 74 (153)
T 1awc_B 58 VSRDARTKVDRTPLHMA 74 (153)
T ss_dssp CCTTCCCTTCCCHHHHH
T ss_pred CCCCCCCCCCCCHHHHH
Confidence 58899999999999994
No 41
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=98.26 E-value=4.3e-07 Score=75.94 Aligned_cols=79 Identities=15% Similarity=0.082 Sum_probs=48.6
Q ss_pred hhHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCCCCCcee-eeecccchHHHHHHhhcCCCC
Q 025881 14 EGIAERKMVSDLSNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLSSPVVL-ADMEHRQVKTVNSFLAETPES 92 (247)
Q Consensus 14 ~~~~~~~~~~~~~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~GNTiL-LAv~~~~~kiv~~Ll~~~~~~ 92 (247)
+|.+-+ +.|+++++.+.++.|++.-.. +....+++ .+|.+|+||| +|+..++.+++++|++.+
T Consensus 77 ~g~t~L-~~A~~~~~~~~v~~Ll~~~~~-------~~~~~~~~-----~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g--- 140 (236)
T 1ikn_D 77 RGNTPL-HLACEQGCLASVGVLTQSCTT-------PHLHSILK-----ATNYNGHTCLHLASIHGYLGIVELLVSLG--- 140 (236)
T ss_dssp TCCCHH-HHHHHHTCHHHHHHHHHSTTT-------TSSSCGGG-----CCCTTCCCHHHHHHHTTCHHHHHHHHHHT---
T ss_pred CCCCHH-HHHHHcCCHHHHHHHHhcccc-------hhHHHHhh-----ccCCCCCCHHHHHHHcCCHHHHHHHHHcC---
Confidence 455555 667777777777777764321 11344566 6666666666 666666666666666542
Q ss_pred cccccccccc-CCCCccCC
Q 025881 93 TEAMVNAKEA-GEFAAVNV 110 (247)
Q Consensus 93 ~~v~vn~~N~-~G~TALDI 110 (247)
.++|..|. .|.|||++
T Consensus 141 --~~~~~~~~~~g~tpL~~ 157 (236)
T 1ikn_D 141 --ADVNAQEPCNGRTALHL 157 (236)
T ss_dssp --CCTTCCCTTTCCCHHHH
T ss_pred --CCCCCCCCCCCCCHHHH
Confidence 35666665 66666666
No 42
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=98.25 E-value=3.7e-07 Score=73.48 Aligned_cols=74 Identities=9% Similarity=0.013 Sum_probs=61.2
Q ss_pred hHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCCCCCcee-eeecccchHHHHHHhhcCCCCc
Q 025881 15 GIAERKMVSDLSNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLSSPVVL-ADMEHRQVKTVNSFLAETPEST 93 (247)
Q Consensus 15 ~~~~~~~~~~~~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~GNTiL-LAv~~~~~kiv~~Ll~~~~~~~ 93 (247)
+.+.+ ..|+++|+++.++.|++-- ..-+| .+|.+|+||| +|+..++.+++++|+..+
T Consensus 5 ~~~~l-~~A~~~g~~~~v~~ll~~~------------~~~~~-----~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g---- 62 (179)
T 3f6q_A 5 FMDDI-FTQCREGNAVAVRLWLDNT------------ENDLN-----QGDDHGFSPLHWACREGRSAVVEMLIMRG---- 62 (179)
T ss_dssp --CCH-HHHHHHTCHHHHHHHHHCT------------TSCTT-----CCCTTSCCHHHHHHHTTCHHHHHHHHHTT----
T ss_pred HHHHH-HHHHHcCCHHHHHHHHhcC------------ccccc-----ccCCCCCCHHHHHHHcCcHHHHHHHHHcC----
Confidence 34444 6789999999999887621 34588 9999999999 999999999999999763
Q ss_pred cccccccccCCCCccCCC
Q 025881 94 EAMVNAKEAGEFAAVNVP 111 (247)
Q Consensus 94 ~v~vn~~N~~G~TALDI~ 111 (247)
.++|..|..|.|||+++
T Consensus 63 -~~~~~~~~~g~t~L~~A 79 (179)
T 3f6q_A 63 -ARINVMNRGDDTPLHLA 79 (179)
T ss_dssp -CCTTCCCTTCCCHHHHH
T ss_pred -CCCCCcCCCCCCHHHHH
Confidence 58899999999999994
No 43
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=98.25 E-value=2.5e-07 Score=80.53 Aligned_cols=44 Identities=16% Similarity=0.050 Sum_probs=23.4
Q ss_pred CCCCCCCcee-eeecccchHHHHHHhhcCCCCccccccccccCCCCccCC
Q 025881 62 GKPLSSPVVL-ADMEHRQVKTVNSFLAETPESTEAMVNAKEAGEFAAVNV 110 (247)
Q Consensus 62 ~kD~~GNTiL-LAv~~~~~kiv~~Ll~~~~~~~~v~vn~~N~~G~TALDI 110 (247)
.+|.+|+||| +|+..++.+++++|++.+ .++|.+|..|.|||++
T Consensus 242 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-----a~~n~~d~~g~t~L~~ 286 (351)
T 3utm_A 242 EKNKDFMTPLHVAAERAHNDVMEVLHKHG-----AKMNALDSLGQTALHR 286 (351)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTTSCCHHHH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHCC-----CCCCCcCCCCCCHHHH
Confidence 5555555555 555555555555555432 3455555555555555
No 44
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=98.24 E-value=2.8e-07 Score=74.91 Aligned_cols=74 Identities=20% Similarity=0.056 Sum_probs=62.7
Q ss_pred hhHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCCCCCcee-eeecccchHHHHHHhhcCCCC
Q 025881 14 EGIAERKMVSDLSNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLSSPVVL-ADMEHRQVKTVNSFLAETPES 92 (247)
Q Consensus 14 ~~~~~~~~~~~~~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~GNTiL-LAv~~~~~kiv~~Ll~~~~~~ 92 (247)
+|.+-+ +.|+++++.+.++.|++.- .-+| .+|.+|+||| .|+..++.+++++|+..+
T Consensus 67 ~g~t~L-~~A~~~~~~~~v~~Ll~~g-------------~~~~-----~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g--- 124 (192)
T 2rfm_A 67 EGSTAL-IWAVKNNRLGIAEKLLSKG-------------SNVN-----TKDFSGKTPLMWSIIFGYSEMSYFLLEHG--- 124 (192)
T ss_dssp TSCCHH-HHHHHTTCHHHHHHHHHHT-------------CCTT-----CCCTTSCCHHHHHHHHTCHHHHHHHHHTT---
T ss_pred cCccHH-HHHHHcCCHHHHHHHHHCC-------------CCCC-----CCCCCCCcHHHHHHHcCCHHHHHHHHHCC---
Confidence 577777 8999999999999888631 1378 8999999999 999999999999999753
Q ss_pred ccccccccccCCCCccCCC
Q 025881 93 TEAMVNAKEAGEFAAVNVP 111 (247)
Q Consensus 93 ~~v~vn~~N~~G~TALDI~ 111 (247)
.++|..|..|.|||+++
T Consensus 125 --~~~~~~~~~g~t~L~~A 141 (192)
T 2rfm_A 125 --ANVNDRNLEGETPLIVA 141 (192)
T ss_dssp --CCSSCCCTTCCCHHHHH
T ss_pred --CCCCCCCCCCCCHHHHH
Confidence 58899999999999994
No 45
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=98.24 E-value=9e-08 Score=74.06 Aligned_cols=73 Identities=11% Similarity=-0.068 Sum_probs=61.9
Q ss_pred hhHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCCC-CCcee-eeecccchHHHHHHhhcCCC
Q 025881 14 EGIAERKMVSDLSNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLS-SPVVL-ADMEHRQVKTVNSFLAETPE 91 (247)
Q Consensus 14 ~~~~~~~~~~~~~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~-GNTiL-LAv~~~~~kiv~~Ll~~~~~ 91 (247)
+|.+-+ +.|++ ++.+.++.|++.= .-+| .+|.+ |+||| +|+..++.+++++|++.+
T Consensus 44 ~g~t~L-~~A~~-~~~~~v~~Ll~~g-------------~~~~-----~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-- 101 (136)
T 1d9s_A 44 FGRRPI-QVMMM-GSAQVAELLLLHG-------------AEPN-----CADPATLTRPVHDAAREGFLDTLVVLHRAG-- 101 (136)
T ss_dssp TCCTTT-TTSTT-SCHHHHHHHHHHT-------------CCSS-----CCBTTTTBCHHHHHHHHTCHHHHHHHHHTC--
T ss_pred CCCCHH-HHHHc-CCHHHHHHHHHCC-------------CCCC-----CcCCCCCCCHHHHHHHcCCHHHHHHHHHcC--
Confidence 455666 78888 9999999988631 2378 99999 99999 999999999999999753
Q ss_pred CccccccccccCCCCccCCC
Q 025881 92 STEAMVNAKEAGEFAAVNVP 111 (247)
Q Consensus 92 ~~~v~vn~~N~~G~TALDI~ 111 (247)
.++|..|..|.|||+++
T Consensus 102 ---a~~~~~d~~g~tpl~~A 118 (136)
T 1d9s_A 102 ---ARLDVCDAWGRLPVDLA 118 (136)
T ss_dssp ---CCCCCCSSSSSCHHHHH
T ss_pred ---CCCCccCCCCCCHHHHH
Confidence 58899999999999984
No 46
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=98.23 E-value=3.1e-07 Score=72.84 Aligned_cols=74 Identities=14% Similarity=-0.007 Sum_probs=57.1
Q ss_pred hhHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCCCCCcee-eeecccchHHHHHHhhcCCCC
Q 025881 14 EGIAERKMVSDLSNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLSSPVVL-ADMEHRQVKTVNSFLAETPES 92 (247)
Q Consensus 14 ~~~~~~~~~~~~~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~GNTiL-LAv~~~~~kiv~~Ll~~~~~~ 92 (247)
+|.+-+ +.|+++++.+.++.|++. ..-+| .+|.+|+||| +|+..++.+++++|+..+
T Consensus 35 ~g~t~L-~~A~~~~~~~~v~~Ll~~-------------g~~~~-----~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g--- 92 (167)
T 3v31_A 35 EGFTPL-MWAAAHGQIAVVEFLLQN-------------GADPQ-----LLGKGRESALSLACSKGYTDIVKMLLDCG--- 92 (167)
T ss_dssp TSCCHH-HHHHHTTCHHHHHHHHHT-------------TCCTT-----CCCTTCCCHHHHHHHHTCHHHHHHHHHHT---
T ss_pred CCCCHH-HHHHHCCCHHHHHHHHHc-------------CCCCC-----CcCCCCCcHHHHHHHcCCHHHHHHHHHCC---
Confidence 566667 788888998888888753 11367 7888888888 888888888888888653
Q ss_pred ccccccccccCCCCccCCC
Q 025881 93 TEAMVNAKEAGEFAAVNVP 111 (247)
Q Consensus 93 ~~v~vn~~N~~G~TALDI~ 111 (247)
.++|..|..|.|||+.+
T Consensus 93 --~~~~~~~~~g~t~L~~A 109 (167)
T 3v31_A 93 --VDVNEYDWNGGTPLLYA 109 (167)
T ss_dssp --CCTTCCCTTSCCHHHHH
T ss_pred --CCCCcCCCCCCCHHHHH
Confidence 47788888888888883
No 47
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=98.23 E-value=3.3e-07 Score=77.73 Aligned_cols=73 Identities=12% Similarity=0.014 Sum_probs=61.8
Q ss_pred hHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCCCCCcee-eeecccchHHHHHHhhcCCCCc
Q 025881 15 GIAERKMVSDLSNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLSSPVVL-ADMEHRQVKTVNSFLAETPEST 93 (247)
Q Consensus 15 ~~~~~~~~~~~~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~GNTiL-LAv~~~~~kiv~~Ll~~~~~~~ 93 (247)
|.+.+ +.|+++|+.+.++.|++. ..-+| .+|.+|+||| +|+..++.+++++|+..+
T Consensus 37 ~~t~L-~~A~~~g~~~~v~~Ll~~-------------g~~~~-----~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g---- 93 (239)
T 1ycs_B 37 PLALL-LDSSLEGEFDLVQRIIYE-------------VDDPS-----LPNDEGITALHNAVCAGHTEIVKFLVQFG---- 93 (239)
T ss_dssp CHHHH-HHHHHHTCHHHHHHHTST-------------TSSCC-----CCCTTSCCHHHHHHHHTCHHHHHHHHHHT----
T ss_pred hhHHH-HHHHHcCCHHHHHHHHHc-------------CCCCC-----CcCCCCCCHHHHHHHcCCHHHHHHHHHcC----
Confidence 46666 889999999999988742 12478 9999999999 999999999999999753
Q ss_pred cccccccccCCCCccCCC
Q 025881 94 EAMVNAKEAGEFAAVNVP 111 (247)
Q Consensus 94 ~v~vn~~N~~G~TALDI~ 111 (247)
.++|..|.+|.|||+++
T Consensus 94 -a~~~~~d~~g~tpL~~A 110 (239)
T 1ycs_B 94 -VNVNAADSDGWTPLHCA 110 (239)
T ss_dssp -CCTTCCCTTCCCHHHHH
T ss_pred -CCCCccCCCCCCHHHHH
Confidence 58899999999999994
No 48
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=98.23 E-value=2.9e-07 Score=78.13 Aligned_cols=75 Identities=15% Similarity=0.092 Sum_probs=64.6
Q ss_pred hhhHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCCCCCcee-eeecccchHHHHHHhhcCCC
Q 025881 13 EEGIAERKMVSDLSNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLSSPVVL-ADMEHRQVKTVNSFLAETPE 91 (247)
Q Consensus 13 ~~~~~~~~~~~~~~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~GNTiL-LAv~~~~~kiv~~Ll~~~~~ 91 (247)
.+|.+-+ +.|+++++.++++.|++. . .-+| .+|.+|+||| +|+..++.+++++|+..+
T Consensus 68 ~~g~t~L-~~A~~~g~~~~v~~Ll~~--g-----------a~~~-----~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g-- 126 (239)
T 1ycs_B 68 DEGITAL-HNAVCAGHTEIVKFLVQF--G-----------VNVN-----AADSDGWTPLHCAASCNNVQVCKFLVESG-- 126 (239)
T ss_dssp TTSCCHH-HHHHHHTCHHHHHHHHHH--T-----------CCTT-----CCCTTCCCHHHHHHHTTCHHHHHHHHHTT--
T ss_pred CCCCCHH-HHHHHcCCHHHHHHHHHc--C-----------CCCC-----ccCCCCCCHHHHHHHcCCHHHHHHHHHcC--
Confidence 3577777 899999999999999873 1 1378 9999999999 999999999999999864
Q ss_pred CccccccccccCCC-CccCCC
Q 025881 92 STEAMVNAKEAGEF-AAVNVP 111 (247)
Q Consensus 92 ~~~v~vn~~N~~G~-TALDI~ 111 (247)
.++|..|..|. ||||+.
T Consensus 127 ---a~~~~~~~~~~~t~l~~a 144 (239)
T 1ycs_B 127 ---AAVFAMTYSDMQTAADKC 144 (239)
T ss_dssp ---CCTTCCCSSSCCCHHHHC
T ss_pred ---CCcceecCCCCcchHHHH
Confidence 58899998887 999985
No 49
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=98.22 E-value=3.5e-07 Score=78.26 Aligned_cols=75 Identities=13% Similarity=0.034 Sum_probs=59.2
Q ss_pred hhhhHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCCCCCcee-eeecccchHHHHHHhhcCC
Q 025881 12 LEEGIAERKMVSDLSNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLSSPVVL-ADMEHRQVKTVNSFLAETP 90 (247)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~GNTiL-LAv~~~~~kiv~~Ll~~~~ 90 (247)
-.+|.+.+ +.|+++++.+.++.|++ . . -+| .+|.+|+||| +|+..++.+++++|+..+
T Consensus 42 ~~~g~t~L-~~A~~~g~~~~v~~Ll~--~-~-----------~~~-----~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g- 100 (244)
T 3ui2_A 42 VSEYETPW-WTAARKADEQALSQLLE--D-R-----------DVD-----AVDENGRTALLFVAGLGSDKCVRLLAEAG- 100 (244)
T ss_dssp HHHHHHHH-HHHHTTTCHHHHHHTTT--T-C-----------CTT-----CBCTTSCBHHHHHHHHTCHHHHHHHHHTT-
T ss_pred ccCCCCHH-HHHHHcCCHHHHHHHHc--C-C-----------CCC-----CcCCCCCCHHHHHHHCCCHHHHHHHHHcC-
Confidence 35788888 88899999998888876 2 1 367 8888888888 888888888888888753
Q ss_pred CCccccccccc-cCCCCccCCC
Q 025881 91 ESTEAMVNAKE-AGEFAAVNVP 111 (247)
Q Consensus 91 ~~~~v~vn~~N-~~G~TALDI~ 111 (247)
.++|..| ..|.|||+++
T Consensus 101 ----a~~~~~~~~~g~t~L~~A 118 (244)
T 3ui2_A 101 ----ADLDHRDMRGGLTALHMA 118 (244)
T ss_dssp ----CCTTCCCSSSCCCHHHHH
T ss_pred ----CCCCcCCCCCCCCHHHHH
Confidence 4777787 7788888884
No 50
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=98.22 E-value=3.8e-07 Score=75.56 Aligned_cols=73 Identities=15% Similarity=0.109 Sum_probs=47.9
Q ss_pred hhHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCCCCCcee-eeecccchHHHHHHhhcCCCC
Q 025881 14 EGIAERKMVSDLSNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLSSPVVL-ADMEHRQVKTVNSFLAETPES 92 (247)
Q Consensus 14 ~~~~~~~~~~~~~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~GNTiL-LAv~~~~~kiv~~Ll~~~~~~ 92 (247)
+|.+-+ +.|+++++.+.++.|++. ..-+| .+|.+|+||| .|+..++.+++++|+..+
T Consensus 105 ~g~t~L-~~A~~~~~~~~~~~Ll~~-------------g~~~~-----~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g--- 162 (231)
T 3aji_A 105 NGCTPL-HYAASKNRHEIAVMLLEG-------------GANPD-----AKDHYDATAMHRAAAKGNLKMVHILLFYK--- 162 (231)
T ss_dssp TSCCHH-HHHHHTTCHHHHHHHHHT-------------TCCTT-----CCCTTSCCHHHHHHHHTCHHHHHHHHHTT---
T ss_pred CCCCHH-HHHHHcCCHHHHHHHHHc-------------CCCCC-----CcCCCCCcHHHHHHHcCCHHHHHHHHhcC---
Confidence 455555 677777888777776642 11255 6677777777 777777777777776542
Q ss_pred ccccccccccCCCCccCC
Q 025881 93 TEAMVNAKEAGEFAAVNV 110 (247)
Q Consensus 93 ~~v~vn~~N~~G~TALDI 110 (247)
.++|..|.+|.|||++
T Consensus 163 --~~~~~~~~~g~t~L~~ 178 (231)
T 3aji_A 163 --ASTNIQDTEGNTPLHL 178 (231)
T ss_dssp --CCSCCCCTTSCCHHHH
T ss_pred --CCccccCCCCCCHHHH
Confidence 3666677777777776
No 51
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=98.21 E-value=3.4e-07 Score=77.85 Aligned_cols=75 Identities=11% Similarity=-0.028 Sum_probs=57.2
Q ss_pred hhhHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCCCCCcee-eeecccchHHHHHHhhcCCC
Q 025881 13 EEGIAERKMVSDLSNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLSSPVVL-ADMEHRQVKTVNSFLAETPE 91 (247)
Q Consensus 13 ~~~~~~~~~~~~~~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~GNTiL-LAv~~~~~kiv~~Ll~~~~~ 91 (247)
.+|.+-+ +.|+++++.+.++.|++.- .-+| .+|.+|+||| .|+..++.+++++|++.+
T Consensus 122 ~~g~t~L-~~A~~~~~~~~v~~Ll~~g-------------~~~~-----~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g-- 180 (253)
T 1yyh_A 122 HDGTTPL-ILAARLAVEGMLEDLINSH-------------ADVN-----AVDDLGKSALHWAAAVNNVDAAVVLLKNG-- 180 (253)
T ss_dssp TTCCCHH-HHHHHHTCSSHHHHHHHTT-------------CCTT-----CBCTTSCBHHHHHHHHTCHHHHHHHHHTT--
T ss_pred CCCCcHH-HHHHHcChHHHHHHHHHcC-------------CCCC-----CcCCCCCCHHHHHHHcCCHHHHHHHHHcC--
Confidence 3566666 7888888888888887621 1367 8888888888 888888888888888653
Q ss_pred CccccccccccCCCCccCCC
Q 025881 92 STEAMVNAKEAGEFAAVNVP 111 (247)
Q Consensus 92 ~~~v~vn~~N~~G~TALDI~ 111 (247)
.++|..|..|.|||+++
T Consensus 181 ---a~~~~~~~~g~tpL~~A 197 (253)
T 1yyh_A 181 ---ANKDMQNNREETPLFLA 197 (253)
T ss_dssp ---CCTTCCCTTSCCHHHHH
T ss_pred ---CCCCCcCCCCCCHHHHH
Confidence 47788888888888884
No 52
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=98.21 E-value=3e-07 Score=87.00 Aligned_cols=75 Identities=9% Similarity=0.017 Sum_probs=64.7
Q ss_pred hhhHHHHHHHHhh---hcchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCCCCCcee-eeecccchHHHHHHhhc
Q 025881 13 EEGIAERKMVSDL---SNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLSSPVVL-ADMEHRQVKTVNSFLAE 88 (247)
Q Consensus 13 ~~~~~~~~~~~~~---~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~GNTiL-LAv~~~~~kiv~~Ll~~ 88 (247)
.+|.+-+ ++|++ +++.+.+++|++. . .=+| .+|.+|+||| +|+..++.+++++|+..
T Consensus 169 ~~g~t~L-h~A~~~a~~g~~~~v~~Ll~~--g-----------a~vn-----~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ 229 (497)
T 3lvq_E 169 APEELVL-HLAVKVANQASLPLVDFIIQN--G-----------GHLD-----AKAADGNTALHYAALYNQPDCLKLLLKG 229 (497)
T ss_dssp CSCBCHH-HHHHHTCCTTTHHHHHHHHHH--S-----------CCTT-----CCCSSSCCHHHHHTTTTCHHHHHHHHHT
T ss_pred cccchHH-HHHHHhcccccHHHHHHHHHc--C-----------CCCC-----ccCCCCCcHHHHHHHcCCHHHHHHHHHc
Confidence 4677778 88965 8999999999872 1 2389 9999999999 99999999999999986
Q ss_pred CCCCccccccccccCCCCccCCC
Q 025881 89 TPESTEAMVNAKEAGEFAAVNVP 111 (247)
Q Consensus 89 ~~~~~~v~vn~~N~~G~TALDI~ 111 (247)
+ .++|++|++|.||||++
T Consensus 230 g-----a~~~~~d~~g~tpl~~A 247 (497)
T 3lvq_E 230 R-----ALVGTVNEAGETALDIA 247 (497)
T ss_dssp C-----CCCSCCCTTCCCHHHHH
T ss_pred C-----CCCCCcCCCCCCHHHHH
Confidence 4 58999999999999994
No 53
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=98.21 E-value=5e-07 Score=71.94 Aligned_cols=69 Identities=17% Similarity=0.057 Sum_probs=60.1
Q ss_pred HHHhhhcchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCCCCCcee-eeecccchHHHHHHhhcCCCCccccccc
Q 025881 21 MVSDLSNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLSSPVVL-ADMEHRQVKTVNSFLAETPESTEAMVNA 99 (247)
Q Consensus 21 ~~~~~~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~GNTiL-LAv~~~~~kiv~~Ll~~~~~~~~v~vn~ 99 (247)
..|+++|+++.++.|++. ....+| .+|.+|+||| +|+..++.+++++|+..+ .++|.
T Consensus 7 ~~A~~~g~~~~v~~ll~~------------~~~~~~-----~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----~~~~~ 64 (172)
T 3v30_A 7 HQLAAQGELDQLKEHLRK------------GDNLVN-----KPDERGFTPLIWASAFGEIETVRFLLEWG-----ADPHI 64 (172)
T ss_dssp HHHHHTTCHHHHHHHHTT------------CSGGGG-----CCCTTSCCHHHHHHHTTCHHHHHHHHHHT-----CCTTC
T ss_pred HHHHHcCCHHHHHHHHHc------------Cccccc-----CCCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCchh
Confidence 578999999998888752 234689 9999999999 999999999999999753 58899
Q ss_pred cccCCCCccCCC
Q 025881 100 KEAGEFAAVNVP 111 (247)
Q Consensus 100 ~N~~G~TALDI~ 111 (247)
.|..|.|||+++
T Consensus 65 ~~~~g~t~L~~A 76 (172)
T 3v30_A 65 LAKERESALSLA 76 (172)
T ss_dssp CCTTCCCHHHHH
T ss_pred hcccCCCHHHHH
Confidence 999999999994
No 54
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=98.20 E-value=3.6e-07 Score=78.13 Aligned_cols=73 Identities=8% Similarity=0.022 Sum_probs=62.3
Q ss_pred hHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCC-CCCCcee-eeecccchHHHHHHhhcCCCC
Q 025881 15 GIAERKMVSDLSNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKP-LSSPVVL-ADMEHRQVKTVNSFLAETPES 92 (247)
Q Consensus 15 ~~~~~~~~~~~~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD-~~GNTiL-LAv~~~~~kiv~~Ll~~~~~~ 92 (247)
|.+-+ +.|+.+++.+.+++|++. ..-+| .+| .+|+||| +|+.+++.+++++|+..+
T Consensus 77 g~t~L-~~A~~~g~~~~v~~Ll~~-------------ga~~~-----~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g--- 134 (244)
T 3ui2_A 77 GRTAL-LFVAGLGSDKCVRLLAEA-------------GADLD-----HRDMRGGLTALHMAAGYVRPEVVEALVELG--- 134 (244)
T ss_dssp SCBHH-HHHHHHTCHHHHHHHHHT-------------TCCTT-----CCCSSSCCCHHHHHHHTTCHHHHHHHHHTT---
T ss_pred CCCHH-HHHHHCCCHHHHHHHHHc-------------CCCCC-----cCCCCCCCCHHHHHHHcCCHHHHHHHHHCC---
Confidence 55666 899999999999998863 12366 777 8899999 999999999999999863
Q ss_pred ccccccccccCCCCccCCC
Q 025881 93 TEAMVNAKEAGEFAAVNVP 111 (247)
Q Consensus 93 ~~v~vn~~N~~G~TALDI~ 111 (247)
.++|.+|+.|.||||++
T Consensus 135 --a~~~~~d~~g~t~l~~A 151 (244)
T 3ui2_A 135 --ADIEVEDERGLTALELA 151 (244)
T ss_dssp --CCTTCCCTTCCCHHHHH
T ss_pred --CCCCCCCCCCCcHHHHH
Confidence 58899999999999995
No 55
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=98.20 E-value=2.2e-07 Score=77.70 Aligned_cols=78 Identities=8% Similarity=0.030 Sum_probs=49.6
Q ss_pred hhHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCCCCCcee-eeecccchHHHHHHhhcCCCC
Q 025881 14 EGIAERKMVSDLSNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLSSPVVL-ADMEHRQVKTVNSFLAETPES 92 (247)
Q Consensus 14 ~~~~~~~~~~~~~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~GNTiL-LAv~~~~~kiv~~Ll~~~~~~ 92 (247)
+|.+-+ +.|+++++.+.++.|++. ..-+| .+|.+|+||| .|+..++.+++++|+......
T Consensus 44 ~g~t~L-~~A~~~~~~~~v~~Ll~~-------------g~~~~-----~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~ 104 (236)
T 1ikn_D 44 LQQTPL-HLAVITNQPEIAEALLGA-------------GCDPE-----LRDFRGNTPLHLACEQGCLASVGVLTQSCTTP 104 (236)
T ss_dssp TCCCHH-HHHHHTTCHHHHHCCCSC-------------CCCSC-----CCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTT
T ss_pred CCCCHH-HHHHHcCCHHHHHHHHHc-------------CCCCC-----CcCCCCCCHHHHHHHcCCHHHHHHHHhcccch
Confidence 455666 677777777777766541 11256 6777777777 777777777777777654310
Q ss_pred -ccccccccccCCCCccCC
Q 025881 93 -TEAMVNAKEAGEFAAVNV 110 (247)
Q Consensus 93 -~~v~vn~~N~~G~TALDI 110 (247)
....++..|..|.|||++
T Consensus 105 ~~~~~~~~~~~~g~t~L~~ 123 (236)
T 1ikn_D 105 HLHSILKATNYNGHTCLHL 123 (236)
T ss_dssp SSSCGGGCCCTTCCCHHHH
T ss_pred hHHHHhhccCCCCCCHHHH
Confidence 012356677777777777
No 56
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=98.20 E-value=2.7e-07 Score=82.30 Aligned_cols=77 Identities=8% Similarity=-0.092 Sum_probs=45.1
Q ss_pred hHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCCCCCcee-eeecccchHHHHHHhhcCCCCc
Q 025881 15 GIAERKMVSDLSNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLSSPVVL-ADMEHRQVKTVNSFLAETPEST 93 (247)
Q Consensus 15 ~~~~~~~~~~~~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~GNTiL-LAv~~~~~kiv~~Ll~~~~~~~ 93 (247)
|.+-+ +.|+.+++.++++.|++.-... ...-+| .+|.+|+||| +|+..++.+++++|+..+
T Consensus 173 g~t~L-~~A~~~g~~~~v~~Ll~~g~~~--------~~~~~~-----~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g---- 234 (364)
T 3ljn_A 173 DETPL-MRAMEFRNREALDLMMDTVPSK--------SSLRLD-----YANKQGNSHLHWAILINWEDVAMRFVEMG---- 234 (364)
T ss_dssp SCCHH-HHHHHTTCHHHHHHHHHHCSCS--------SSCCTT-----CCCTTCCCTTHHHHTTTCHHHHHHHHTTT----
T ss_pred CCCHH-HHHHHcCCHHHHHHHHhccccc--------cccccc-----ccCCCCCcHHHHHHHcCCHHHHHHHHHcC----
Confidence 44444 5555555555555555432100 011266 6777777777 777777777777776542
Q ss_pred cccccccccCCCCccCC
Q 025881 94 EAMVNAKEAGEFAAVNV 110 (247)
Q Consensus 94 ~v~vn~~N~~G~TALDI 110 (247)
.++|..|.+|.|||++
T Consensus 235 -ad~~~~d~~g~tpL~~ 250 (364)
T 3ljn_A 235 -IDVNMEDNEHTVPLYL 250 (364)
T ss_dssp -CCTTCCCTTSCCHHHH
T ss_pred -CCCCCCCCCCCCHHHH
Confidence 4667777777777777
No 57
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=98.18 E-value=6.4e-07 Score=71.56 Aligned_cols=73 Identities=15% Similarity=0.101 Sum_probs=62.0
Q ss_pred hHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCCCCCcee-eeecccchHHHHHHhhcCCCCc
Q 025881 15 GIAERKMVSDLSNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLSSPVVL-ADMEHRQVKTVNSFLAETPEST 93 (247)
Q Consensus 15 ~~~~~~~~~~~~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~GNTiL-LAv~~~~~kiv~~Ll~~~~~~~ 93 (247)
+.+.. ..|+++|+.|.++.|++- ..-+| .+|.+|+||| .|+..++.+++++|+..+
T Consensus 14 ~~~~l-~~A~~~g~~~~v~~Ll~~-------------g~~~~-----~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g---- 70 (169)
T 2y1l_E 14 LGKKL-LEAARAGRDDEVRILMAN-------------GADVN-----AEDASGWTPLHLAAFNGHLEIVEVLLKNG---- 70 (169)
T ss_dssp HHHHH-HHHHHHTCHHHHHHHHHT-------------TCCTT-----CCCTTSCCHHHHHHHTTCHHHHHHHHHTT----
T ss_pred ccchH-HHHHHcCCHHHHHHHHHC-------------CCCCC-----CCCCCCCCHHHHHHHcCCHHHHHHHHHcC----
Confidence 34445 789999999999988762 11378 9999999999 999999999999999753
Q ss_pred cccccccccCCCCccCCC
Q 025881 94 EAMVNAKEAGEFAAVNVP 111 (247)
Q Consensus 94 ~v~vn~~N~~G~TALDI~ 111 (247)
.++|..|..|.|||+.+
T Consensus 71 -~~~~~~~~~g~t~L~~A 87 (169)
T 2y1l_E 71 -ADVNAVDHAGMTPLRLA 87 (169)
T ss_dssp -CCTTCCCTTSCCHHHHH
T ss_pred -CCCCccCCCCCCHHHHH
Confidence 58899999999999994
No 58
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=98.18 E-value=8.5e-07 Score=75.48 Aligned_cols=75 Identities=12% Similarity=-0.011 Sum_probs=63.9
Q ss_pred hhhHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCCCCCcee-eeecccchHHHHHHhhcCCC
Q 025881 13 EEGIAERKMVSDLSNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLSSPVVL-ADMEHRQVKTVNSFLAETPE 91 (247)
Q Consensus 13 ~~~~~~~~~~~~~~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~GNTiL-LAv~~~~~kiv~~Ll~~~~~ 91 (247)
.+|.+-+ +.|+.+++.|+++.|++. ..-+| .+|.+|+||| +|+..++.+++++|++.+
T Consensus 52 ~~g~tpL-h~A~~~g~~~~v~~Ll~~-------------ga~~n-----~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g-- 110 (229)
T 2vge_A 52 EEGITAL-HNAICGANYSIVDFLITA-------------GANVN-----SPDSHGWTPLHCAASCNDTVICMALVQHG-- 110 (229)
T ss_dssp TTSCCHH-HHHHHTTCHHHHHHHHHT-------------TCCTT-----CCCTTCCCHHHHHHHTTCHHHHHHHHTTT--
T ss_pred CCCCCHH-HHHHHcCCHHHHHHHHHC-------------CCCCC-----CCCCCCCCHHHHHHHcCCHHHHHHHHHcC--
Confidence 3577777 899999999999998863 12378 9999999999 999999999999999753
Q ss_pred Cccccccccc-cCCCCccCCC
Q 025881 92 STEAMVNAKE-AGEFAAVNVP 111 (247)
Q Consensus 92 ~~~v~vn~~N-~~G~TALDI~ 111 (247)
.++|..+ .+|.|||+++
T Consensus 111 ---a~~~~~~~~~g~tpL~~A 128 (229)
T 2vge_A 111 ---AAIFATTLSDGATAFEKC 128 (229)
T ss_dssp ---CCTTCCCSSTTCCTGGGC
T ss_pred ---CCcccccCCCCCCHHHHH
Confidence 5888886 6999999985
No 59
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=98.17 E-value=4.5e-07 Score=75.37 Aligned_cols=74 Identities=15% Similarity=0.023 Sum_probs=55.0
Q ss_pred hhHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCCCCCcee-eeecccchHHHHHHhhcCCCC
Q 025881 14 EGIAERKMVSDLSNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLSSPVVL-ADMEHRQVKTVNSFLAETPES 92 (247)
Q Consensus 14 ~~~~~~~~~~~~~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~GNTiL-LAv~~~~~kiv~~Ll~~~~~~ 92 (247)
+|.+.+ ..|+++++.+.++.|++.- .-+| .+|.+|+||| .|+..++.+++++|+..+
T Consensus 110 ~g~t~L-~~A~~~~~~~~~~~Ll~~g-------------~~~~-----~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g--- 167 (237)
T 3b7b_A 110 GGWTPM-IWATEYKHVDLVKLLLSKG-------------SDIN-----IRDNEENICLHWAAFSGCVDIAEILLAAK--- 167 (237)
T ss_dssp TSCCHH-HHHHHTTCHHHHHHHHHTT-------------CCTT-----CCCTTSCCHHHHHHHHCCHHHHHHHHTTT---
T ss_pred CCCCHH-HHHHHcCCHHHHHHHHHCC-------------CCCC-----ccCCCCCCHHHHHHHCCCHHHHHHHHHcC---
Confidence 466666 7888888988888877621 1256 7788888888 888888888888887643
Q ss_pred ccccccccccCCCCccCCC
Q 025881 93 TEAMVNAKEAGEFAAVNVP 111 (247)
Q Consensus 93 ~~v~vn~~N~~G~TALDI~ 111 (247)
.++|..|..|.|||+++
T Consensus 168 --~~~~~~~~~g~t~L~~A 184 (237)
T 3b7b_A 168 --CDLHAVNIHGDSPLHIA 184 (237)
T ss_dssp --CCTTCCCTTCCCHHHHH
T ss_pred --CCCCCcCCCCCCHHHHH
Confidence 47777888888888873
No 60
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=98.16 E-value=8.1e-07 Score=77.40 Aligned_cols=42 Identities=17% Similarity=0.017 Sum_probs=23.5
Q ss_pred CCCCCcee-eeecccchHHHHHHhhcCCCCccccccccccCCCCccCC
Q 025881 64 PLSSPVVL-ADMEHRQVKTVNSFLAETPESTEAMVNAKEAGEFAAVNV 110 (247)
Q Consensus 64 D~~GNTiL-LAv~~~~~kiv~~Ll~~~~~~~~v~vn~~N~~G~TALDI 110 (247)
|.+|+||| +|+..++.+++++|+..+ .++|++|++|.||||+
T Consensus 219 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----ad~~~~d~~g~t~l~~ 261 (285)
T 3d9h_A 219 GKGQDSPLHAVVRTASEELACLLMDFG-----ADTQAKNAEGKRPVEL 261 (285)
T ss_dssp CBTTBCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTTSCCGGGG
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHCC-----CCCCCcCCCCCCHHHH
Confidence 55555555 555555555555555432 3555556666666655
No 61
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=98.15 E-value=1.1e-06 Score=69.45 Aligned_cols=76 Identities=13% Similarity=0.117 Sum_probs=61.9
Q ss_pred hhhhhHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCCCCCcee-eeecccchHHHHHHhhcC
Q 025881 11 ELEEGIAERKMVSDLSNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLSSPVVL-ADMEHRQVKTVNSFLAET 89 (247)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~GNTiL-LAv~~~~~kiv~~Ll~~~ 89 (247)
..++|.+.+ ..|+++|+.+.++.|++. ..-+| .+|.+|+||| +|. .++.+++++|+..+
T Consensus 8 ~~~~~~t~L-~~A~~~g~~~~v~~Ll~~-------------g~~~~-----~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g 67 (156)
T 1bi7_B 8 SMEPSADWL-ATAAARGRVEEVRALLEA-------------GANPN-----APNSYGRRPIQVMM-MGSARVAELLLLHG 67 (156)
T ss_dssp --CCSTTHH-HHHHHHTCHHHHHHHHTT-------------TCCTT-----CCCSSSCCTTTSSC-TTCHHHHHHHHTTT
T ss_pred CCccchHHH-HHHHHcCCHHHHHHHHHc-------------CCCCC-----CCCCCCCCHHHHHH-cCCHHHHHHHHHcC
Confidence 345677777 899999999999988852 12378 8999999999 885 89999999999753
Q ss_pred CCCccccccccccCCCC-ccCCC
Q 025881 90 PESTEAMVNAKEAGEFA-AVNVP 111 (247)
Q Consensus 90 ~~~~~v~vn~~N~~G~T-ALDI~ 111 (247)
.++|..|..|.| ||+++
T Consensus 68 -----~~~~~~d~~g~ttpL~~A 85 (156)
T 1bi7_B 68 -----AEPNCADPATLTRPVHDA 85 (156)
T ss_dssp -----CCCCCCCTTTCCCHHHHH
T ss_pred -----CCCCCcCCCCCcHHHHHH
Confidence 588999999999 99984
No 62
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=98.15 E-value=6.6e-07 Score=76.55 Aligned_cols=43 Identities=16% Similarity=-0.015 Sum_probs=26.2
Q ss_pred CCCCCcee-eeecccchHHHHHHhhcCCCCccccccccccCCCCccCCC
Q 025881 64 PLSSPVVL-ADMEHRQVKTVNSFLAETPESTEAMVNAKEAGEFAAVNVP 111 (247)
Q Consensus 64 D~~GNTiL-LAv~~~~~kiv~~Ll~~~~~~~~v~vn~~N~~G~TALDI~ 111 (247)
|.+|+||| +|+..++.+++++|++.+ .++|++|++|.||+|++
T Consensus 163 ~~~g~t~Lh~A~~~~~~~~v~~Ll~~g-----ad~~~~d~~g~tpl~~A 206 (261)
T 2xai_A 163 GKGQDSPLHAVARTASEELACLLMDFG-----ADTQAKNAEGKRPVELV 206 (261)
T ss_dssp CBTTBCHHHHHHHHTCHHHHHHHHHTT-----CCTTCCCTTSCCGGGGS
T ss_pred CCCCCChHHHHHHcCCHHHHHHHHHcC-----CCCCCcCCCCCChhhhc
Confidence 55666666 666666666666666542 35666666666666663
No 63
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=98.14 E-value=5.6e-07 Score=82.01 Aligned_cols=73 Identities=15% Similarity=0.132 Sum_probs=48.5
Q ss_pred hhHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCCCCCcee-eeecccchHHHHHHhhcCCCC
Q 025881 14 EGIAERKMVSDLSNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLSSPVVL-ADMEHRQVKTVNSFLAETPES 92 (247)
Q Consensus 14 ~~~~~~~~~~~~~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~GNTiL-LAv~~~~~kiv~~Ll~~~~~~ 92 (247)
+|.+-+ +.|+++++.+++++|++. ..-+| .+|.+|+||| +|+..++.+++++|++.+
T Consensus 277 ~g~t~L-~~A~~~~~~~~~~~Ll~~-------------g~~~~-----~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g--- 334 (437)
T 1n11_A 277 SGLTPL-HLVAQEGHVPVADVLIKH-------------GVMVD-----ATTRMGYTPLHVASHYGNIKLVKFLLQHQ--- 334 (437)
T ss_dssp TCCCHH-HHHHHHTCHHHHHHHHHH-------------TCCTT-----CCCSSCCCHHHHHHHSSCSHHHHHHHHTT---
T ss_pred CCCCHH-HHHHHcCCHHHHHHHHhC-------------CccCC-----CCCCCCCCHHHHHHHcCcHHHHHHHHhcC---
Confidence 455556 677777787777776652 12356 6677777777 777777777777776542
Q ss_pred ccccccccccCCCCccCC
Q 025881 93 TEAMVNAKEAGEFAAVNV 110 (247)
Q Consensus 93 ~~v~vn~~N~~G~TALDI 110 (247)
.++|.+|+.|.||||+
T Consensus 335 --ad~n~~~~~g~t~L~~ 350 (437)
T 1n11_A 335 --ADVNAKTKLGYSPLHQ 350 (437)
T ss_dssp --CCTTCCCTTSCCHHHH
T ss_pred --CCCCCCCCCCCCHHHH
Confidence 3666777777777776
No 64
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=98.14 E-value=5.1e-07 Score=76.41 Aligned_cols=77 Identities=8% Similarity=-0.033 Sum_probs=62.2
Q ss_pred hhHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCC--------------CCCCcee-eeecccc
Q 025881 14 EGIAERKMVSDLSNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKP--------------LSSPVVL-ADMEHRQ 78 (247)
Q Consensus 14 ~~~~~~~~~~~~~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD--------------~~GNTiL-LAv~~~~ 78 (247)
+|.+-+ +.|+++++.|.+++|++.=- =+| .+| .+|+||| +|+..++
T Consensus 92 ~g~t~L-~~A~~~g~~~~v~~Ll~~ga-------------~~~-----~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~ 152 (260)
T 3jxi_A 92 RGQTAL-HIAIERRCKHYVELLVEKGA-------------DVH-----AQARGRFFQPKDEGGYFYFGELPLSLAACTNQ 152 (260)
T ss_dssp ESBCHH-HHHHHTTCHHHHHHHHHTTC-------------CTT-----CCCEECCCSSSCCCCSCCSCSSHHHHHHHTTC
T ss_pred CCCCHH-HHHHHcCCHHHHHHHHhCCC-------------CcC-----ccccccccCcccccccccCCCCHHHHHHHcCC
Confidence 677777 89999999999999987311 134 444 6899999 9999999
Q ss_pred hHHHHHHhhcCCCCccccccccccCCCCccCCC
Q 025881 79 VKTVNSFLAETPESTEAMVNAKEAGEFAAVNVP 111 (247)
Q Consensus 79 ~kiv~~Ll~~~~~~~~v~vn~~N~~G~TALDI~ 111 (247)
.+++++|++... .+.++|.+|..|.|||+++
T Consensus 153 ~~~v~~Ll~~~~--~ga~~~~~d~~g~TpLh~A 183 (260)
T 3jxi_A 153 PHIVHYLTENGH--KQADLRRQDSRGNTVLHAL 183 (260)
T ss_dssp HHHHHHHHHCSS--CCCCTTCCCTTSCCHHHHH
T ss_pred HHHHHHHHhccc--cCCCCcccCCCCCcHHHHH
Confidence 999999998310 1268999999999999984
No 65
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=98.14 E-value=6.2e-07 Score=70.85 Aligned_cols=73 Identities=11% Similarity=-0.002 Sum_probs=56.8
Q ss_pred hhHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCCCCCc-ee-eeecccchHHHHHHhhcCCC
Q 025881 14 EGIAERKMVSDLSNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLSSPV-VL-ADMEHRQVKTVNSFLAETPE 91 (247)
Q Consensus 14 ~~~~~~~~~~~~~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~GNT-iL-LAv~~~~~kiv~~Ll~~~~~ 91 (247)
+|.+-+ +.| .+++.+.+++|++. ..-+| .+|.+|+| || +|+..++.+++++|+..+
T Consensus 44 ~g~t~L-~~A-~~~~~~~v~~Ll~~-------------g~~~~-----~~d~~g~ttpL~~A~~~~~~~~v~~Ll~~g-- 101 (156)
T 1bi7_B 44 YGRRPI-QVM-MMGSARVAELLLLH-------------GAEPN-----CADPATLTRPVHDAAREGFLDTLVVLHRAG-- 101 (156)
T ss_dssp SSCCTT-TSS-CTTCHHHHHHHHTT-------------TCCCC-----CCCTTTCCCHHHHHHHHTCHHHHHHHHHHT--
T ss_pred CCCCHH-HHH-HcCCHHHHHHHHHc-------------CCCCC-----CcCCCCCcHHHHHHHHCCCHHHHHHHHHcC--
Confidence 455555 455 48889988888752 12378 88999998 99 999999999999998753
Q ss_pred CccccccccccCCCCccCCC
Q 025881 92 STEAMVNAKEAGEFAAVNVP 111 (247)
Q Consensus 92 ~~~v~vn~~N~~G~TALDI~ 111 (247)
.++|.+|..|.|||+++
T Consensus 102 ---a~~~~~d~~g~tpl~~A 118 (156)
T 1bi7_B 102 ---ARLDVRDAWGRLPVDLA 118 (156)
T ss_dssp ---CCSSCCCTTCCCHHHHH
T ss_pred ---CCCcccCCCCCCHHHHH
Confidence 58889999999999984
No 66
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=98.13 E-value=6.7e-07 Score=70.84 Aligned_cols=68 Identities=16% Similarity=0.072 Sum_probs=59.7
Q ss_pred HHHhhhcchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCCCCCcee-eeecccchHHHHHHhhcCCCCccccccc
Q 025881 21 MVSDLSNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLSSPVVL-ADMEHRQVKTVNSFLAETPESTEAMVNA 99 (247)
Q Consensus 21 ~~~~~~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~GNTiL-LAv~~~~~kiv~~Ll~~~~~~~~v~vn~ 99 (247)
..|+++|+.+.++.|++. ..-+| .+|.+|+||| .|+..++.+++++|+..+ .++|.
T Consensus 8 ~~A~~~g~~~~v~~ll~~-------------~~~~~-----~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----~~~~~ 64 (167)
T 3v31_A 8 HQLAAQGEMLYLATRIEQ-------------ENVIN-----HTDEEGFTPLMWAAAHGQIAVVEFLLQNG-----ADPQL 64 (167)
T ss_dssp HHHHHTTCHHHHHHHHHH-------------SSCTT-----CCCTTSCCHHHHHHHTTCHHHHHHHHHTT-----CCTTC
T ss_pred HHHHHCCCHHHHHHHHHc-------------CCCcC-----CCCCCCCCHHHHHHHCCCHHHHHHHHHcC-----CCCCC
Confidence 678999999999998863 12489 9999999999 999999999999999863 58899
Q ss_pred cccCCCCccCCC
Q 025881 100 KEAGEFAAVNVP 111 (247)
Q Consensus 100 ~N~~G~TALDI~ 111 (247)
.|..|.|||+++
T Consensus 65 ~~~~g~t~L~~A 76 (167)
T 3v31_A 65 LGKGRESALSLA 76 (167)
T ss_dssp CCTTCCCHHHHH
T ss_pred cCCCCCcHHHHH
Confidence 999999999994
No 67
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=98.13 E-value=4.5e-07 Score=74.66 Aligned_cols=75 Identities=11% Similarity=-0.016 Sum_probs=62.4
Q ss_pred hhhHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCCCCCcee-eeecccchHHHHHHhhcCCC
Q 025881 13 EEGIAERKMVSDLSNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLSSPVVL-ADMEHRQVKTVNSFLAETPE 91 (247)
Q Consensus 13 ~~~~~~~~~~~~~~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~GNTiL-LAv~~~~~kiv~~Ll~~~~~ 91 (247)
.+|.+.+ +.|+++++.+.++.|++. ..-+| .+|.+|+||| .|+..++.+++++|++.+
T Consensus 90 ~~g~t~L-~~A~~~~~~~~~~~Ll~~-------------g~~~~-----~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-- 148 (223)
T 2f8y_A 90 HDGTTPL-ILAARLAVEGMLEDLINS-------------HADVN-----AVDDLGKSALHWAAAVNNVDAAVVLLKNG-- 148 (223)
T ss_dssp TTCCCHH-HHHHHHTCHHHHHHHHHT-------------TCCTT-----CBCTTSCBHHHHHHHTTCHHHHHHHHHTT--
T ss_pred CCCCcHH-HHHHHhCcHHHHHHHHHc-------------CCCCc-----CcCCCCCcHHHHHHHcCCHHHHHHHHHcC--
Confidence 3566677 889999999998888762 12378 8999999999 999999999999999753
Q ss_pred CccccccccccCCCCccCCC
Q 025881 92 STEAMVNAKEAGEFAAVNVP 111 (247)
Q Consensus 92 ~~~v~vn~~N~~G~TALDI~ 111 (247)
.++|..|..|.|||+++
T Consensus 149 ---~~~~~~~~~g~t~L~~A 165 (223)
T 2f8y_A 149 ---ANKDMQNNREETPLFLA 165 (223)
T ss_dssp ---CCTTCCCTTCCCHHHHH
T ss_pred ---CCCCCcCCCCcCHHHHH
Confidence 58899999999999994
No 68
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=98.12 E-value=1e-06 Score=74.56 Aligned_cols=78 Identities=12% Similarity=0.025 Sum_probs=63.0
Q ss_pred hhhHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCCC-------------CCcee-eeecccc
Q 025881 13 EEGIAERKMVSDLSNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLS-------------SPVVL-ADMEHRQ 78 (247)
Q Consensus 13 ~~~~~~~~~~~~~~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~-------------GNTiL-LAv~~~~ 78 (247)
.+|.+-+ +.|+++++.|+++.|++.= .-+| .+|.+ |+||| +|+..++
T Consensus 88 ~~g~t~L-~~A~~~g~~~~v~~Ll~~g-------------a~~~-----~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~ 148 (256)
T 2etb_A 88 YQGHSAL-HIAIEKRSLQCVKLLVENG-------------ADVH-----LRACGRFFQKHQGTCFYFGELPLSLAACTKQ 148 (256)
T ss_dssp TTTCCHH-HHHHHTTCHHHHHHHHHTT-------------CCTT-----CCCCSGGGSCCSSSCCCSCSSHHHHHHHTTC
T ss_pred ccCCCHH-HHHHHcCCHHHHHHHHHcC-------------CCCC-----cccccccccccccccccCCCCHHHHHHHcCC
Confidence 3577888 8999999999999998741 1255 56654 99999 9999999
Q ss_pred hHHHHHHhhcCCCCccccccccccCCCCccCCC
Q 025881 79 VKTVNSFLAETPESTEAMVNAKEAGEFAAVNVP 111 (247)
Q Consensus 79 ~kiv~~Ll~~~~~~~~v~vn~~N~~G~TALDI~ 111 (247)
.+++++|++... .+.++|.+|.+|.|||+++
T Consensus 149 ~~~v~~Ll~~~~--~ga~~n~~d~~g~TpLh~A 179 (256)
T 2etb_A 149 WDVVTYLLENPH--QPASLEATDSLGNTVLHAL 179 (256)
T ss_dssp HHHHHHHHHCSS--CCCCTTCCCTTSCCHHHHH
T ss_pred HHHHHHHHhccc--cCCCcCccCCCCCCHHHHH
Confidence 999999998310 1268999999999999984
No 69
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=98.12 E-value=6.4e-07 Score=72.72 Aligned_cols=74 Identities=12% Similarity=0.105 Sum_probs=63.5
Q ss_pred hhHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCCCCCcee-eeecccchHHHHHHhhcCCCC
Q 025881 14 EGIAERKMVSDLSNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLSSPVVL-ADMEHRQVKTVNSFLAETPES 92 (247)
Q Consensus 14 ~~~~~~~~~~~~~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~GNTiL-LAv~~~~~kiv~~Ll~~~~~~ 92 (247)
+|.+.+ +.|+++|+.+.++.|++.- .-+| .+|.+|+||| +|+..++.+++++|+..+
T Consensus 34 ~g~t~L-~~A~~~g~~~~v~~Ll~~~-------------~~~~-----~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g--- 91 (192)
T 2rfm_A 34 YNRTPL-MVACMLGMENAIDKLVENF-------------DKLE-----DKDIEGSTALIWAVKNNRLGIAEKLLSKG--- 91 (192)
T ss_dssp TCCCHH-HHHHHHTCGGGHHHHHHHH-------------CCTT-----CCCTTSCCHHHHHHHTTCHHHHHHHHHHT---
T ss_pred CCCCHH-HHHHHcCCHHHHHHHHHhc-------------cccc-----cccccCccHHHHHHHcCCHHHHHHHHHCC---
Confidence 466677 8899999999999998732 1378 8999999999 999999999999999864
Q ss_pred ccccccccccCCCCccCCC
Q 025881 93 TEAMVNAKEAGEFAAVNVP 111 (247)
Q Consensus 93 ~~v~vn~~N~~G~TALDI~ 111 (247)
.++|..|..|.|||+++
T Consensus 92 --~~~~~~~~~g~t~L~~A 108 (192)
T 2rfm_A 92 --SNVNTKDFSGKTPLMWS 108 (192)
T ss_dssp --CCTTCCCTTSCCHHHHH
T ss_pred --CCCCCCCCCCCcHHHHH
Confidence 48899999999999984
No 70
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=98.11 E-value=1.1e-06 Score=72.50 Aligned_cols=77 Identities=9% Similarity=0.013 Sum_probs=65.3
Q ss_pred hhhHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCCCCCcee-eeecccchHHHHHHhhcCCC
Q 025881 13 EEGIAERKMVSDLSNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLSSPVVL-ADMEHRQVKTVNSFLAETPE 91 (247)
Q Consensus 13 ~~~~~~~~~~~~~~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~GNTiL-LAv~~~~~kiv~~Ll~~~~~ 91 (247)
.+|.+.+ +.|+++++.+.++.|++.- ...-+| .+|.+|+||| .|+..++.+++++|++.+
T Consensus 70 ~~g~t~L-~~A~~~~~~~~~~~Ll~~g-----------~~~~~~-----~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-- 130 (228)
T 2dzn_A 70 DSGWTPF-HIACSVGNLEVVKSLYDRP-----------LKPDLN-----KITNQGVTCLHLAVGKKWFEVSQFLIENG-- 130 (228)
T ss_dssp TTSCCHH-HHHHHHCCHHHHHHHHSSS-----------SCCCTT-----CCCTTCCCHHHHHHHTTCHHHHHHHHHTT--
T ss_pred CCCCCHH-HHHHHcCCHHHHHHHHhCC-----------CCcccc-----cCCcCCCCHHHHHHHcCCHhHHHHHHHcC--
Confidence 4677777 8999999999998887531 123578 9999999999 999999999999999763
Q ss_pred CccccccccccCCCCccCCC
Q 025881 92 STEAMVNAKEAGEFAAVNVP 111 (247)
Q Consensus 92 ~~~v~vn~~N~~G~TALDI~ 111 (247)
.++|..|..|.|||+.+
T Consensus 131 ---~~~~~~~~~g~t~L~~A 147 (228)
T 2dzn_A 131 ---ASVRIKDKFNQIPLHRA 147 (228)
T ss_dssp ---CCSCCCCTTSCCHHHHH
T ss_pred ---CCccccCCCCCCHHHHH
Confidence 58899999999999994
No 71
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=98.11 E-value=9.8e-07 Score=75.47 Aligned_cols=74 Identities=12% Similarity=-0.048 Sum_probs=61.7
Q ss_pred hhHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCCCCCcee-eeecccchHHHHHHhhcCCCC
Q 025881 14 EGIAERKMVSDLSNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLSSPVVL-ADMEHRQVKTVNSFLAETPES 92 (247)
Q Consensus 14 ~~~~~~~~~~~~~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~GNTiL-LAv~~~~~kiv~~Ll~~~~~~ 92 (247)
+|.+-+ +.|+++|+.|.++.|++. ..-+| .+|.+|+||| +|+..++.+++++|++.+
T Consensus 2 ~g~t~L-~~A~~~g~~~~v~~Ll~~-------------g~~~~-----~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g--- 59 (261)
T 2xai_A 2 SDWSPM-HEAAIHGHQLSLRNLISQ-------------GWAVN-----IITADHVSPLHEACLGGHLSCVKILLKHG--- 59 (261)
T ss_dssp --CCHH-HHHHHHTCHHHHHHHHHT-------------TCCSS-----CCCTTCCCHHHHHHHHTCHHHHHHHHHTT---
T ss_pred CCCCHH-HHHHHcCCHHHHHHHHHC-------------CCCCC-----CcCCCCCCHHHHHHHcCCHHHHHHHHHCC---
Confidence 355566 789999999999998862 11378 9999999999 999999999999999863
Q ss_pred ccccccccccCCCCccCCC
Q 025881 93 TEAMVNAKEAGEFAAVNVP 111 (247)
Q Consensus 93 ~~v~vn~~N~~G~TALDI~ 111 (247)
.++|..|.+|.|||+.+
T Consensus 60 --~~~~~~~~~g~t~L~~A 76 (261)
T 2xai_A 60 --AQVNGVTADWHTPLFNA 76 (261)
T ss_dssp --CCTTCCCTTSCCHHHHH
T ss_pred --CCCCCCCCCCCCHHHHH
Confidence 58899999999999984
No 72
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=98.10 E-value=7e-07 Score=76.43 Aligned_cols=90 Identities=11% Similarity=0.039 Sum_probs=62.2
Q ss_pred hhHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcccc-cccccccCCCCCCCCCCCCcee-eeecccchHHHHHHhhcCCC
Q 025881 14 EGIAERKMVSDLSNRIDDLKVDLEWYKEVSRLKNKS-YYDSFNNSLGGAGKPLSSPVVL-ADMEHRQVKTVNSFLAETPE 91 (247)
Q Consensus 14 ~~~~~~~~~~~~~~~~ealk~Lv~~~~~~~~~~~~~-~~~~llN~~~~~~kD~~GNTiL-LAv~~~~~kiv~~Ll~~~~~ 91 (247)
+|.+-+ +.|+++++.|+++.|++.=-..+...... +...-.+ ..|.+|+||| +|+..++.+++++|++...
T Consensus 100 ~g~tpL-~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~-----~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~- 172 (273)
T 2pnn_A 100 KGQTAL-HIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGR-----PGFYFGELPLSLAACTNQLAIVKFLLQNSW- 172 (273)
T ss_dssp TTCCHH-HHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSS-----CCCCSCBSHHHHHHHTTCHHHHHHHHHCSS-
T ss_pred CCCCHH-HHHHHcCCHHHHHHHHHCCCCcCcccccccccccccc-----ccccCCCCHHHHHHHcCCHHHHHHHHhccc-
Confidence 577778 89999999999999987411111000000 0000112 3334899999 9999999999999998310
Q ss_pred CccccccccccCCCCccCCC
Q 025881 92 STEAMVNAKEAGEFAAVNVP 111 (247)
Q Consensus 92 ~~~v~vn~~N~~G~TALDI~ 111 (247)
.+.++|.+|.+|.|||+++
T Consensus 173 -~gad~~~~d~~g~tpLh~A 191 (273)
T 2pnn_A 173 -QPADISARDSVGNTVLHAL 191 (273)
T ss_dssp -CCCCTTCCCTTSCCHHHHH
T ss_pred -CCCCceeeCCCCCcHHHHH
Confidence 1268999999999999984
No 73
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=98.09 E-value=5.3e-07 Score=81.65 Aligned_cols=75 Identities=12% Similarity=0.088 Sum_probs=65.0
Q ss_pred hhHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCCCCCcee-eeecccchHHHHHHhhcCCCC
Q 025881 14 EGIAERKMVSDLSNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLSSPVVL-ADMEHRQVKTVNSFLAETPES 92 (247)
Q Consensus 14 ~~~~~~~~~~~~~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~GNTiL-LAv~~~~~kiv~~Ll~~~~~~ 92 (247)
+|.+-+ +.|+++++.++++.|++.- ..-+| .+|.+|+||| +|+.+++.+++++|+..+
T Consensus 278 ~g~t~L-h~A~~~g~~~~v~~Ll~~~------------~~~~n-----~~d~~g~TpL~~A~~~g~~~iv~~Ll~~g--- 336 (373)
T 2fo1_E 278 KGRTAL-HYAAQVSNMPIVKYLVGEK------------GSNKD-----KQDEDGKTPIMLAAQEGRIEVVMYLIQQG--- 336 (373)
T ss_dssp CCCCTH-HHHHSSCCHHHHHHHHHHS------------CCCTT-----CCCTTCCCHHHHHHHHTCHHHHHHHHHTT---
T ss_pred cCCCHH-HHHHHhCCHHHHHHHHHhc------------CCCcc-----CcCCCCCCHHHHHHHcCCHHHHHHHHHcC---
Confidence 566777 8999999999999998632 13478 9999999999 999999999999999853
Q ss_pred ccccccccccCCCCccCCC
Q 025881 93 TEAMVNAKEAGEFAAVNVP 111 (247)
Q Consensus 93 ~~v~vn~~N~~G~TALDI~ 111 (247)
.++|..|..|.||||++
T Consensus 337 --ad~~~~d~~g~t~l~~A 353 (373)
T 2fo1_E 337 --ASVEAVDATDHTARQLA 353 (373)
T ss_dssp --CCSSCCCSSSCCHHHHH
T ss_pred --CCccCCCCCCCCHHHHH
Confidence 58999999999999995
No 74
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=98.08 E-value=1.6e-06 Score=67.67 Aligned_cols=73 Identities=10% Similarity=0.017 Sum_probs=61.8
Q ss_pred hHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCCCCCcee-eeecccchHHHHHHhhcCCCCc
Q 025881 15 GIAERKMVSDLSNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLSSPVVL-ADMEHRQVKTVNSFLAETPEST 93 (247)
Q Consensus 15 ~~~~~~~~~~~~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~GNTiL-LAv~~~~~kiv~~Ll~~~~~~~ 93 (247)
|.+.+ ..|+++|+.+.++.|++. . ..-+| .+|.+|+||| + +..++.+++++|+..+
T Consensus 2 ~~~~L-~~A~~~g~~~~v~~ll~~-~-----------~~~~~-----~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g---- 58 (156)
T 1bd8_A 2 AGDRL-SGAAARGDVQEVRRLLHR-E-----------LVHPD-----ALNRFGKTALQV-MMFGSTAIALELLKQG---- 58 (156)
T ss_dssp HHHHH-HHHHHHTCHHHHHHHHHT-T-----------CCCTT-----CCCTTSCCHHHH-SCTTCHHHHHHHHHTT----
T ss_pred cchHH-HHHHHhCCHHHHHHHHHh-h-----------CcCcc-----ccCCCCCcHHHH-HHcCCHHHHHHHHHCC----
Confidence 44555 789999999999999875 2 12478 8999999999 9 9999999999999753
Q ss_pred cccccccccCCCCccCCC
Q 025881 94 EAMVNAKEAGEFAAVNVP 111 (247)
Q Consensus 94 ~v~vn~~N~~G~TALDI~ 111 (247)
.++|..|..|.|||+.+
T Consensus 59 -~~~~~~~~~g~t~L~~A 75 (156)
T 1bd8_A 59 -ASPNVQDTSGTSPVHDA 75 (156)
T ss_dssp -CCTTCCCTTSCCHHHHH
T ss_pred -CCCCCcCCCCCCHHHHH
Confidence 58899999999999994
No 75
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=98.08 E-value=8.9e-07 Score=75.77 Aligned_cols=86 Identities=16% Similarity=0.158 Sum_probs=65.7
Q ss_pred hhhHHHHHHHHhhh---cchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCCCCCcee-eeecccchHHHHHHhhc
Q 025881 13 EEGIAERKMVSDLS---NRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLSSPVVL-ADMEHRQVKTVNSFLAE 88 (247)
Q Consensus 13 ~~~~~~~~~~~~~~---~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~GNTiL-LAv~~~~~kiv~~Ll~~ 88 (247)
.+|.+-+ ++|+.+ ++.|++++|++.-..... ...++| .+--.+|.+|+||| +|+..++.+++++|+..
T Consensus 52 ~~g~tpL-~~A~~~~~~g~~~~v~~Ll~~ga~~~~------~~~~i~-~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ 123 (273)
T 2pnn_A 52 ETGKTCL-LKAMLNLHNGQNDTIALLLDVARKTDS------LKQFVN-ASYTDSYYKGQTALHIAIERRNMTLVTLLVEN 123 (273)
T ss_dssp TTCCCHH-HHHHHSCBTTBCHHHHHHHHHHHHTTC------HHHHHT-CCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHT
T ss_pred cCCCCHH-HHHHHHHhcCChHHHHHHHHhhccccc------hhHHhh-cccccccCCCCCHHHHHHHcCCHHHHHHHHHC
Confidence 3677888 899987 999999999987543221 123455 00003788999999 99999999999999986
Q ss_pred CCCCcccccccccc--------------CCCCccCCC
Q 025881 89 TPESTEAMVNAKEA--------------GEFAAVNVP 111 (247)
Q Consensus 89 ~~~~~~v~vn~~N~--------------~G~TALDI~ 111 (247)
+ .++|..|+ .|.|||+++
T Consensus 124 g-----a~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A 155 (273)
T 2pnn_A 124 G-----ADVQAAANGDFFKKTKGRPGFYFGELPLSLA 155 (273)
T ss_dssp T-----CCTTCCBCSGGGSSCSSSCCCCSCBSHHHHH
T ss_pred C-----CCcCccccccccccccccccccCCCCHHHHH
Confidence 4 47888887 799999994
No 76
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=98.07 E-value=8.6e-07 Score=75.33 Aligned_cols=76 Identities=9% Similarity=-0.015 Sum_probs=65.2
Q ss_pred hhhHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCCCCCcee-eeecccchHHHHHHhhcCCC
Q 025881 13 EEGIAERKMVSDLSNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLSSPVVL-ADMEHRQVKTVNSFLAETPE 91 (247)
Q Consensus 13 ~~~~~~~~~~~~~~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~GNTiL-LAv~~~~~kiv~~Ll~~~~~ 91 (247)
.+|.+.+ +.|+++++.+.++.|++.- ..-+| .+|.+|+||| +|+..++.+++++|+..+
T Consensus 88 ~~g~t~L-~~A~~~~~~~~v~~Ll~~~------------~~~~~-----~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-- 147 (253)
T 1yyh_A 88 NMGRTPL-HAAVSADAQGVFQILIRNR------------ATDLD-----ARMHDGTTPLILAARLAVEGMLEDLINSH-- 147 (253)
T ss_dssp TTSCCHH-HHHHHHTCHHHHHHHHHST------------TSCTT-----CCCTTCCCHHHHHHHHTCSSHHHHHHHTT--
T ss_pred CCCCCHH-HHHHHcCCHHHHHHHHHcC------------CCCcc-----ccCCCCCcHHHHHHHcChHHHHHHHHHcC--
Confidence 4577777 8999999999999987621 23578 9999999999 999999999999999853
Q ss_pred CccccccccccCCCCccCCC
Q 025881 92 STEAMVNAKEAGEFAAVNVP 111 (247)
Q Consensus 92 ~~~v~vn~~N~~G~TALDI~ 111 (247)
.++|..|.+|.|||+.+
T Consensus 148 ---~~~~~~d~~g~t~L~~A 164 (253)
T 1yyh_A 148 ---ADVNAVDDLGKSALHWA 164 (253)
T ss_dssp ---CCTTCBCTTSCBHHHHH
T ss_pred ---CCCCCcCCCCCCHHHHH
Confidence 58899999999999994
No 77
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=98.07 E-value=2.5e-06 Score=75.16 Aligned_cols=64 Identities=14% Similarity=0.006 Sum_probs=50.1
Q ss_pred cchhhhhhhHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCC-CCCcee-eeecccchHHHHH
Q 025881 7 QGQSELEEGIAERKMVSDLSNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPL-SSPVVL-ADMEHRQVKTVNS 84 (247)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~-~GNTiL-LAv~~~~~kiv~~ 84 (247)
.+...-.+|.+.+ +.|+++|++|.+|.|++- .. =+| .+|. .|.||| +|+..++.++|++
T Consensus 17 ~~~~~~~~~~t~L-~~Av~~g~~~~V~~LL~~--Ga-----------dvn-----~~~~~~g~TpLh~A~~~g~~~iv~~ 77 (337)
T 4g8k_A 17 SGRRAAVEDNHLL-IKAVQNEDVDLVQQLLEG--GA-----------NVN-----FQEEEGGWTPLHNAVQMSREDIVEL 77 (337)
T ss_dssp ----CHHHHHHHH-HHHHHTTCHHHHHHHHHH--TC-----------CTT-----CCCTTTCCCHHHHHHHTTCHHHHHH
T ss_pred cCCCCCCCCChHH-HHHHHcCCHHHHHHHHHC--CC-----------CCC-----ccCCCCCcCHHHHHHHcCCHHHHHH
Confidence 3444556788888 999999999999999862 11 267 7775 599999 9999999999999
Q ss_pred HhhcC
Q 025881 85 FLAET 89 (247)
Q Consensus 85 Ll~~~ 89 (247)
|++.+
T Consensus 78 Ll~~g 82 (337)
T 4g8k_A 78 LLRHG 82 (337)
T ss_dssp HHHTT
T ss_pred HHHcC
Confidence 99864
No 78
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=98.07 E-value=9.7e-07 Score=72.66 Aligned_cols=76 Identities=9% Similarity=-0.015 Sum_probs=65.1
Q ss_pred hhhHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCCCCCcee-eeecccchHHHHHHhhcCCC
Q 025881 13 EEGIAERKMVSDLSNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLSSPVVL-ADMEHRQVKTVNSFLAETPE 91 (247)
Q Consensus 13 ~~~~~~~~~~~~~~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~GNTiL-LAv~~~~~kiv~~Ll~~~~~ 91 (247)
.+|.+.+ +.|+++++.|.++.|++. ....+| .+|.+|.||| +|+..++.+++++|+..+
T Consensus 56 ~~g~t~L-~~A~~~~~~~~v~~Ll~~------------~~~~~~-----~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-- 115 (223)
T 2f8y_A 56 NMGRTPL-HAAVSADAQGVFQILIRN------------RATDLD-----ARMHDGTTPLILAARLAVEGMLEDLINSH-- 115 (223)
T ss_dssp TTSCCHH-HHHHHTTCHHHHHHHHHB------------TTSCTT-----CCCTTCCCHHHHHHHHTCHHHHHHHHHTT--
T ss_pred CCCCCHH-HHHHHcCCHHHHHHHHHc------------CCCCcc-----cCCCCCCcHHHHHHHhCcHHHHHHHHHcC--
Confidence 4566777 899999999999998862 123678 9999999999 999999999999999853
Q ss_pred CccccccccccCCCCccCCC
Q 025881 92 STEAMVNAKEAGEFAAVNVP 111 (247)
Q Consensus 92 ~~~v~vn~~N~~G~TALDI~ 111 (247)
.++|..|.+|.|||+.+
T Consensus 116 ---~~~~~~~~~g~t~L~~A 132 (223)
T 2f8y_A 116 ---ADVNAVDDLGKSALHWA 132 (223)
T ss_dssp ---CCTTCBCTTSCBHHHHH
T ss_pred ---CCCcCcCCCCCcHHHHH
Confidence 58899999999999994
No 79
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=98.07 E-value=1.3e-06 Score=77.74 Aligned_cols=79 Identities=10% Similarity=0.104 Sum_probs=66.7
Q ss_pred hhHHHHHHHHhhhc--chhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCCCCCcee-eeecccchHHHHHHhhcCC
Q 025881 14 EGIAERKMVSDLSN--RIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLSSPVVL-ADMEHRQVKTVNSFLAETP 90 (247)
Q Consensus 14 ~~~~~~~~~~~~~~--~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~GNTiL-LAv~~~~~kiv~~Ll~~~~ 90 (247)
+|.+-+ +.|+.++ +.|.+++|++. . .-+| .+|.+|+||| +|+..++.+++++|+..+.
T Consensus 137 ~g~t~L-~~A~~~g~~~~~~v~~Ll~~--g-----------a~~~-----~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~ 197 (364)
T 3ljn_A 137 KGQTAL-HWCVGLGPEYLEMIKILVQL--G-----------ASPT-----AKDKADETPLMRAMEFRNREALDLMMDTVP 197 (364)
T ss_dssp SCCCHH-HHHHHSCGGGHHHHHHHHHH--T-----------CCTT-----CCCTTSCCHHHHHHHTTCHHHHHHHHHHCS
T ss_pred CCCCHH-HHHHHcCCchHHHHHHHHHc--C-----------CCCc-----ccCCCCCCHHHHHHHcCCHHHHHHHHhccc
Confidence 467777 8999999 99999999875 1 1378 9999999999 9999999999999998754
Q ss_pred CCccccccccccCCCCccCCC
Q 025881 91 ESTEAMVNAKEAGEFAAVNVP 111 (247)
Q Consensus 91 ~~~~v~vn~~N~~G~TALDI~ 111 (247)
....+++|..|..|.|||+++
T Consensus 198 ~~~~~~~~~~~~~g~t~L~~A 218 (364)
T 3ljn_A 198 SKSSLRLDYANKQGNSHLHWA 218 (364)
T ss_dssp CSSSCCTTCCCTTCCCTTHHH
T ss_pred ccccccccccCCCCCcHHHHH
Confidence 323356999999999999994
No 80
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=98.06 E-value=1.5e-06 Score=75.57 Aligned_cols=73 Identities=16% Similarity=0.107 Sum_probs=48.5
Q ss_pred hhHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCCCCCcee-eeecccchHHHHHHhhcCCCC
Q 025881 14 EGIAERKMVSDLSNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLSSPVVL-ADMEHRQVKTVNSFLAETPES 92 (247)
Q Consensus 14 ~~~~~~~~~~~~~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~GNTiL-LAv~~~~~kiv~~Ll~~~~~~ 92 (247)
+|.+-+ ++|+++|+.+.++.|++. ..-+| .+|.+|+||| +|+..++.+++++|++.+
T Consensus 57 ~g~t~L-~~A~~~g~~~~v~~Ll~~-------------g~~~~-----~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g--- 114 (351)
T 3utm_A 57 RKSTPL-HLAAGYNRVRIVQLLLQH-------------GADVH-----AKDKGGLVPLHNACSYGHYEVTELLLKHG--- 114 (351)
T ss_dssp TCCCHH-HHHHHTTCHHHHHHHHHT-------------TCCTT-----CCCTTCCCHHHHHHHTTCHHHHHHHHHTT---
T ss_pred CCCCHH-HHHHHcCCHHHHHHHHHc-------------CCCCC-----ccCCCCCcHHHHHHHCCCHHHHHHHHHCC---
Confidence 355555 677777777777766642 01256 6777777777 777777777777777643
Q ss_pred ccccccccccCCCCccCC
Q 025881 93 TEAMVNAKEAGEFAAVNV 110 (247)
Q Consensus 93 ~~v~vn~~N~~G~TALDI 110 (247)
.++|..|..|.|||+.
T Consensus 115 --~~~~~~~~~g~t~L~~ 130 (351)
T 3utm_A 115 --ACVNAMDLWQFTPLHE 130 (351)
T ss_dssp --CCTTCCCTTCCCHHHH
T ss_pred --CCCCCCCCCCCCHHHH
Confidence 4667777777777777
No 81
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=98.06 E-value=1e-06 Score=76.70 Aligned_cols=87 Identities=17% Similarity=0.132 Sum_probs=56.5
Q ss_pred hhHHHHHHHHhhhcchhhHHHHHHHHH-HHhh---hccccc----------------------ccccccCCCCCCCCCCC
Q 025881 14 EGIAERKMVSDLSNRIDDLKVDLEWYK-EVSR---LKNKSY----------------------YDSFNNSLGGAGKPLSS 67 (247)
Q Consensus 14 ~~~~~~~~~~~~~~~~ealk~Lv~~~~-~~~~---~~~~~~----------------------~~~llN~~~~~~kD~~G 67 (247)
+|.+-+ ..|+++++.++++.|++.-. ..+. .+.++. .....+ ..|.+|
T Consensus 110 ~g~T~L-h~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~-----~~~~~g 183 (276)
T 4hbd_A 110 NGNTAL-HYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINA-----KASQAG 183 (276)
T ss_dssp TSCCHH-HHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTC-----CCTTTC
T ss_pred CCCCHH-HHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCcc-----ccCCCC
Confidence 466777 88999999999999887321 0000 000000 012344 667778
Q ss_pred Ccee-eeecccchHHHHHHhhcCCCCccccccccccCCCCccCCC
Q 025881 68 PVVL-ADMEHRQVKTVNSFLAETPESTEAMVNAKEAGEFAAVNVP 111 (247)
Q Consensus 68 NTiL-LAv~~~~~kiv~~Ll~~~~~~~~v~vn~~N~~G~TALDI~ 111 (247)
+||| +|+..++.+++++|+..+ .++|..|.+|.|||+++
T Consensus 184 ~tpLh~A~~~g~~~~v~~Ll~~g-----ad~n~~d~~G~TpLh~A 223 (276)
T 4hbd_A 184 QTALMLAVSHGRVDVVKALLACE-----ADVNVQDDDGSTALMCA 223 (276)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTTSCCHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHhCC-----CCCCCCCCCCCCHHHHH
Confidence 8888 888888888888887653 47777888888888774
No 82
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=98.05 E-value=2.4e-06 Score=66.95 Aligned_cols=72 Identities=14% Similarity=0.025 Sum_probs=60.7
Q ss_pred hHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCCCCCcee-eeecccchHHHHHHhhcCCCCc
Q 025881 15 GIAERKMVSDLSNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLSSPVVL-ADMEHRQVKTVNSFLAETPEST 93 (247)
Q Consensus 15 ~~~~~~~~~~~~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~GNTiL-LAv~~~~~kiv~~Ll~~~~~~~ 93 (247)
..+.+ ..|+++|+.+.++.|++- ..-+| .+|.+|+||| +|+. ++.+++++|+..+
T Consensus 5 ~~~~L-~~A~~~g~~~~v~~Ll~~-------------~~~~~-----~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g---- 60 (162)
T 1ihb_A 5 WGNEL-ASAAARGDLEQLTSLLQN-------------NVNVN-----AQNGFGRTALQVMKL-GNPEIARRLLLRG---- 60 (162)
T ss_dssp CHHHH-HHHHHHTCHHHHHHHTTS-------------CCCTT-----CCCTTSCCHHHHCCS-SCHHHHHHHHHTT----
T ss_pred HhhHH-HHHHHcCCHHHHHHHHhC-------------CCCcc-----ccCccCccHHHHHHc-CcHHHHHHHHHcC----
Confidence 44555 789999999999998841 12368 9999999999 9999 9999999999863
Q ss_pred cccccccccCCCCccCCC
Q 025881 94 EAMVNAKEAGEFAAVNVP 111 (247)
Q Consensus 94 ~v~vn~~N~~G~TALDI~ 111 (247)
.++|..|..|.|||+.+
T Consensus 61 -~~~~~~~~~g~t~L~~A 77 (162)
T 1ihb_A 61 -ANPDLKDRTGFAVIHDA 77 (162)
T ss_dssp -CCTTCCCTTSCCHHHHH
T ss_pred -CCCCCCCCCCCCHHHHH
Confidence 58899999999999994
No 83
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=98.05 E-value=2.2e-06 Score=72.48 Aligned_cols=86 Identities=15% Similarity=0.114 Sum_probs=66.3
Q ss_pred hhhHHHHHHHHhhh---cchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCCCCCcee-eeecccchHHHHHHhhc
Q 025881 13 EEGIAERKMVSDLS---NRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLSSPVVL-ADMEHRQVKTVNSFLAE 88 (247)
Q Consensus 13 ~~~~~~~~~~~~~~---~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~GNTiL-LAv~~~~~kiv~~Ll~~ 88 (247)
.+|.+-+ +.|+++ ++.|+++.|++.-..... ...++| .....+|.+|+||| +|+..++.+++++|++.
T Consensus 41 ~~g~t~L-~~A~~~~~~g~~~~v~~Ll~~g~~~~~------~~~~~~-~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ 112 (256)
T 2etb_A 41 STGKTCL-MKAVLNLQDGVNACIMPLLQIDKDSGN------PKPLVN-AQCTDEFYQGHSALHIAIEKRSLQCVKLLVEN 112 (256)
T ss_dssp TTTBCHH-HHHHHTCBTTBCTTHHHHHHHHHHTTC------SSCGGG-CCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHT
T ss_pred CCCCCHH-HHHHHccccchHHHHHHHHhcCCcccc------hhhhcc-cccccccccCCCHHHHHHHcCCHHHHHHHHHc
Confidence 4678888 999999 999999999986543321 223444 01114678899999 99999999999999986
Q ss_pred CCCCccccccccccC-------------CCCccCCC
Q 025881 89 TPESTEAMVNAKEAG-------------EFAAVNVP 111 (247)
Q Consensus 89 ~~~~~~v~vn~~N~~-------------G~TALDI~ 111 (247)
+ .++|..|.. |.|||+++
T Consensus 113 g-----a~~~~~~~~~~~~~~~~~~~~~g~tpL~~A 143 (256)
T 2etb_A 113 G-----ADVHLRACGRFFQKHQGTCFYFGELPLSLA 143 (256)
T ss_dssp T-----CCTTCCCCSGGGSCCSSSCCCSCSSHHHHH
T ss_pred C-----CCCCcccccccccccccccccCCCCHHHHH
Confidence 3 578888887 99999994
No 84
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=98.04 E-value=7.8e-07 Score=75.29 Aligned_cols=86 Identities=14% Similarity=0.076 Sum_probs=66.9
Q ss_pred hhhHHHHHHHHh---hhcchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCCCCCcee-eeecccchHHHHHHhhc
Q 025881 13 EEGIAERKMVSD---LSNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLSSPVVL-ADMEHRQVKTVNSFLAE 88 (247)
Q Consensus 13 ~~~~~~~~~~~~---~~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~GNTiL-LAv~~~~~kiv~~Ll~~ 88 (247)
.+|.+-+ +.|+ ++++.|.++.|++.-..... .......-++ .+|.+|+||| +|+..++.+++++|++.
T Consensus 44 ~~g~t~L-~~A~~~~~~g~~~~v~~Ll~~g~~~~~--~~~~~~~~~~-----~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ 115 (260)
T 3jxi_A 44 STGKTCL-PKALLNLSAGRNDTIPILLDIAEKTGN--MREFINSPFR-----DVYYRGQTALHIAIERRCKHYVELLVEK 115 (260)
T ss_dssp TTCCCHH-HHHHTSCBTTBCTHHHHHHHHHHHTTC--HHHHHTCCBC-----CSSEESBCHHHHHHHTTCHHHHHHHHHT
T ss_pred CCCCcHH-HHHHHHhhcCCHHHHHHHHHhcccccc--hHhhhccccc-----ccccCCCCHHHHHHHcCCHHHHHHHHhC
Confidence 4488888 8888 78999999999987654321 0111223456 7788999999 99999999999999986
Q ss_pred CCCCccccccccc--------------cCCCCccCCC
Q 025881 89 TPESTEAMVNAKE--------------AGEFAAVNVP 111 (247)
Q Consensus 89 ~~~~~~v~vn~~N--------------~~G~TALDI~ 111 (247)
+ .++|..| ..|.|||+++
T Consensus 116 g-----a~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A 147 (260)
T 3jxi_A 116 G-----ADVHAQARGRFFQPKDEGGYFYFGELPLSLA 147 (260)
T ss_dssp T-----CCTTCCCEECCCSSSCCCCSCCSCSSHHHHH
T ss_pred C-----CCcCccccccccCcccccccccCCCCHHHHH
Confidence 4 5788888 6899999994
No 85
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=98.04 E-value=1.2e-06 Score=81.04 Aligned_cols=41 Identities=12% Similarity=0.114 Sum_probs=22.8
Q ss_pred CCCCcee-eeecccchHHHHHHhhcCCCCccccccccccCCCCccCC
Q 025881 65 LSSPVVL-ADMEHRQVKTVNSFLAETPESTEAMVNAKEAGEFAAVNV 110 (247)
Q Consensus 65 ~~GNTiL-LAv~~~~~kiv~~Ll~~~~~~~~v~vn~~N~~G~TALDI 110 (247)
.+|.||| +|+..++.+++++|+..+ .++|..|..|.|||++
T Consensus 233 ~~g~TpLh~Aa~~g~~~iv~~LL~~G-----advn~~d~~G~TpLh~ 274 (368)
T 3jue_A 233 QDNATPLIQATAANSLLACEFLLQNG-----ANVNQADSAGRGPLHH 274 (368)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTTSCCHHHH
T ss_pred cCCCCHHHHHHHCCCHHHHHHHHHcC-----CCCCCCCCCCCCHHHH
Confidence 5555555 555555555555555432 3555555555555555
No 86
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=98.04 E-value=2.5e-06 Score=73.25 Aligned_cols=75 Identities=13% Similarity=0.041 Sum_probs=62.7
Q ss_pred hhhHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCCCCCcee-eeecccchHHHHHHhhcCCC
Q 025881 13 EEGIAERKMVSDLSNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLSSPVVL-ADMEHRQVKTVNSFLAETPE 91 (247)
Q Consensus 13 ~~~~~~~~~~~~~~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~GNTiL-LAv~~~~~kiv~~Ll~~~~~ 91 (247)
.+|.+.+ ..|+.+|+.+.++.|++.= .=+| .+|.+|+||| +|+..++.+++++|+..+
T Consensus 38 ~~~~t~l-~~A~~~g~~~~v~~Ll~~g-------------~~~~-----~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-- 96 (299)
T 1s70_B 38 FDDGAVF-LAACSSGDTEEVLRLLERG-------------ADIN-----YANVDGLTALHQACIDDNVDMVKFLVENG-- 96 (299)
T ss_dssp ECHHHHH-HHHHHHTCHHHHHHHHHHC-------------CCTT-----CBCTTCCBHHHHHHHTTCHHHHHHHHHTT--
T ss_pred cCCccHH-HHHHHcCCHHHHHHHHHcC-------------CCCc-----ccCCCCCCHHHHHHHcCCHHHHHHHHHCC--
Confidence 3566777 8899999999999988621 1278 8999999999 999999999999999753
Q ss_pred CccccccccccCCCCccCCC
Q 025881 92 STEAMVNAKEAGEFAAVNVP 111 (247)
Q Consensus 92 ~~~v~vn~~N~~G~TALDI~ 111 (247)
.++|..|..|.|||+.+
T Consensus 97 ---a~~~~~~~~g~tpL~~A 113 (299)
T 1s70_B 97 ---ANINQPDNEGWIPLHAA 113 (299)
T ss_dssp ---CCTTCCCTTSCCHHHHH
T ss_pred ---CCCCCCCCCCCcHHHHH
Confidence 58899999999999984
No 87
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=98.03 E-value=1.6e-06 Score=71.64 Aligned_cols=68 Identities=18% Similarity=0.178 Sum_probs=43.3
Q ss_pred HHHhhhcchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCCCCCcee-eeecccchHHHHHHhhcCCCCccccccc
Q 025881 21 MVSDLSNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLSSPVVL-ADMEHRQVKTVNSFLAETPESTEAMVNA 99 (247)
Q Consensus 21 ~~~~~~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~GNTiL-LAv~~~~~kiv~~Ll~~~~~~~~v~vn~ 99 (247)
..|+++|++|.++.|++.- ...+| .+|.+|+||| .|+..++.+++++|+..+ .++|.
T Consensus 11 ~~A~~~g~~~~v~~ll~~~------------~~~~~-----~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-----~~~~~ 68 (231)
T 3aji_A 11 CNLAYSGKLDELKERILAD------------KSLAT-----RTDQDSRTALHWACSAGHTEIVEFLLQLG-----VPVND 68 (231)
T ss_dssp HHHHHHTCHHHHHHHHHHC------------GGGGG-----CCCTTSCCHHHHHHHHTCHHHHHHHHHTT-----CCSCC
T ss_pred HHHHHhCCHHHHHHHHHhc------------hhhhh-----cCCCCCCCHHHHHHHcCcHHHHHHHHHhC-----CCCCC
Confidence 4566677777666655421 23466 6677777777 777777777777776542 35666
Q ss_pred cccCCCCccCC
Q 025881 100 KEAGEFAAVNV 110 (247)
Q Consensus 100 ~N~~G~TALDI 110 (247)
.|..|.|||++
T Consensus 69 ~~~~g~t~L~~ 79 (231)
T 3aji_A 69 KDDAGWSPLHI 79 (231)
T ss_dssp CCTTSCCHHHH
T ss_pred cCCCCCCHHHH
Confidence 67777777766
No 88
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=98.02 E-value=2e-06 Score=69.57 Aligned_cols=68 Identities=7% Similarity=-0.003 Sum_probs=39.3
Q ss_pred HHHhhhcchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCCCCCcee-eeecccchHHHHHHhhcCCCCccccccc
Q 025881 21 MVSDLSNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLSSPVVL-ADMEHRQVKTVNSFLAETPESTEAMVNA 99 (247)
Q Consensus 21 ~~~~~~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~GNTiL-LAv~~~~~kiv~~Ll~~~~~~~~v~vn~ 99 (247)
+.|+++++.+.++.|++. ...-+| .+|.+|+||| +|+..++.+++++|++.+ .++|.
T Consensus 10 ~~A~~~g~~~~v~~ll~~------------~~~~~~-----~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----~~~~~ 67 (201)
T 3hra_A 10 LEAANQRDTKKVKEILQD------------TTYQVD-----EVDTEGNTPLNIAVHNNDIEIAKALIDRG-----ADINL 67 (201)
T ss_dssp HHHHHTTCHHHHHHHHTC------------TTCCTT-----CCCTTSCCHHHHHHHHTCHHHHHHHHHTT-----CCTTC
T ss_pred HHHHHhccHHHHHHHHHc------------CCCCCC-----CCCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCCCC
Confidence 455666666665555431 112355 6666666666 666666666666666542 35566
Q ss_pred cccCCCCccCC
Q 025881 100 KEAGEFAAVNV 110 (247)
Q Consensus 100 ~N~~G~TALDI 110 (247)
.|..|.|||+.
T Consensus 68 ~~~~g~t~l~~ 78 (201)
T 3hra_A 68 QNSISDSPYLY 78 (201)
T ss_dssp CCTTSCCHHHH
T ss_pred CCCCCCCHHHH
Confidence 66666666666
No 89
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=98.02 E-value=1.8e-06 Score=69.90 Aligned_cols=76 Identities=13% Similarity=-0.017 Sum_probs=63.6
Q ss_pred hhhHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCCCCCcee-eeecccchHHHHHHhhcCCC
Q 025881 13 EEGIAERKMVSDLSNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLSSPVVL-ADMEHRQVKTVNSFLAETPE 91 (247)
Q Consensus 13 ~~~~~~~~~~~~~~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~GNTiL-LAv~~~~~kiv~~Ll~~~~~ 91 (247)
.+|.+-+ +.|+++++.+.++.|++. ..-+| .+|.+|+||| .|+..++.+++++|+....
T Consensus 37 ~~g~t~L-~~A~~~~~~~~v~~Ll~~-------------g~~~~-----~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~- 96 (201)
T 3hra_A 37 TEGNTPL-NIAVHNNDIEIAKALIDR-------------GADIN-----LQNSISDSPYLYAGAQGRTEILAYMLKHAT- 96 (201)
T ss_dssp TTSCCHH-HHHHHHTCHHHHHHHHHT-------------TCCTT-----CCCTTSCCHHHHHHHTTCHHHHHHHHHHSC-
T ss_pred CCCCCHH-HHHHHcCCHHHHHHHHHc-------------CCCCC-----CCCCCCCCHHHHHHHcCCHHHHHHHHhccC-
Confidence 3677777 899999999999998862 12368 8999999999 9999999999999996532
Q ss_pred CccccccccccCCCCccCCC
Q 025881 92 STEAMVNAKEAGEFAAVNVP 111 (247)
Q Consensus 92 ~~~v~vn~~N~~G~TALDI~ 111 (247)
.+++..|..|.|||+.+
T Consensus 97 ---~~~~~~~~~g~t~L~~A 113 (201)
T 3hra_A 97 ---PDLNKHNRYGGNALIPA 113 (201)
T ss_dssp ---CCTTCCCTTSCCSHHHH
T ss_pred ---cccccccCCCCcHHHHH
Confidence 57899999999999994
No 90
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=98.01 E-value=1.9e-06 Score=71.47 Aligned_cols=78 Identities=9% Similarity=0.046 Sum_probs=46.0
Q ss_pred hHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCCCCCcee-eeecccchHHHHHHhhcCCCCc
Q 025881 15 GIAERKMVSDLSNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLSSPVVL-ADMEHRQVKTVNSFLAETPEST 93 (247)
Q Consensus 15 ~~~~~~~~~~~~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~GNTiL-LAv~~~~~kiv~~Ll~~~~~~~ 93 (247)
|.+.+ +.|+++|+.+.++.|++.- ..-+| .+|.+|+||| +|+..++.+++++|+..+....
T Consensus 3 g~t~L-~~A~~~g~~~~v~~Ll~~~------------g~~~~-----~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~ 64 (232)
T 2rfa_A 3 WESPL-LLAAKENDVQALSKLLKFE------------GCEVH-----QRGAMGETALHIAALYDNLEAAMVLMEAAPELV 64 (232)
T ss_dssp TTCHH-HHHHHTTCHHHHHHHHTTT------------CSCTT-----CCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGG
T ss_pred CCCHH-HHHHHcCCHHHHHHHHHhc------------CCCcc-----cCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhc
Confidence 44445 6677777777766666421 12356 6677777777 7777777777777766542101
Q ss_pred cccccccccCCCCccCC
Q 025881 94 EAMVNAKEAGEFAAVNV 110 (247)
Q Consensus 94 ~v~vn~~N~~G~TALDI 110 (247)
....+..|.+|.|||++
T Consensus 65 ~~~~~~~~~~g~t~L~~ 81 (232)
T 2rfa_A 65 FEPMTSELYEGQTALHI 81 (232)
T ss_dssp GCCCCSTTTTTCCHHHH
T ss_pred cccccccCCCCcCHHHH
Confidence 11225566677777776
No 91
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=98.00 E-value=1.6e-06 Score=75.57 Aligned_cols=75 Identities=12% Similarity=-0.055 Sum_probs=64.2
Q ss_pred hhhHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCCCCCcee-eeecccchHHHHHHhhcCCC
Q 025881 13 EEGIAERKMVSDLSNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLSSPVVL-ADMEHRQVKTVNSFLAETPE 91 (247)
Q Consensus 13 ~~~~~~~~~~~~~~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~GNTiL-LAv~~~~~kiv~~Ll~~~~~ 91 (247)
.+|.+.+ +.|+.+|+.+.++.|++. . .-+| .+|.+|+||| +|+..++.+++++|++.+
T Consensus 57 ~~g~t~L-~~Aa~~g~~~~v~~Ll~~----g---------~~~~-----~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-- 115 (285)
T 3d9h_A 57 VSDWSPM-HEAAIHGHQLSLRNLISQ----G---------WAVN-----IITADHVSPLHEACLGGHLSCVKILLKHG-- 115 (285)
T ss_dssp CCSCCHH-HHHHHTTCHHHHHHHHHT----T---------CCSC-----EECTTCCCHHHHHHHTTCHHHHHHHHHTT--
T ss_pred ccCCCHH-HHHHHcCCHHHHHHHHHC----C---------CCCC-----CcCCCCCCHHHHHHHCCcHHHHHHHHHCC--
Confidence 3566777 899999999999988862 1 1278 8999999999 999999999999999753
Q ss_pred CccccccccccCCCCccCCC
Q 025881 92 STEAMVNAKEAGEFAAVNVP 111 (247)
Q Consensus 92 ~~~v~vn~~N~~G~TALDI~ 111 (247)
.++|..|.+|.|||+.+
T Consensus 116 ---a~~~~~~~~g~t~L~~A 132 (285)
T 3d9h_A 116 ---AQVNGVTADWHTPLFNA 132 (285)
T ss_dssp ---CCSSCCCTTCCCHHHHH
T ss_pred ---CCCCCCCCCCCCHHHHH
Confidence 58899999999999994
No 92
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=97.96 E-value=2.2e-06 Score=71.11 Aligned_cols=76 Identities=13% Similarity=0.039 Sum_probs=64.4
Q ss_pred hhhHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCCCCCcee-eeecccchHHHHHHhhcCCC
Q 025881 13 EEGIAERKMVSDLSNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLSSPVVL-ADMEHRQVKTVNSFLAETPE 91 (247)
Q Consensus 13 ~~~~~~~~~~~~~~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~GNTiL-LAv~~~~~kiv~~Ll~~~~~ 91 (247)
.+|.+.+ +.|+++++.+.++.|++.- ..-+| .+|.+|.||| .|+..++.+++++|++.+
T Consensus 75 ~~g~t~L-~~A~~~~~~~~~~~Ll~~~------------~~~~~-----~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-- 134 (237)
T 3b7b_A 75 AEGSTCL-HLAAKKGHYEVVQYLLSNG------------QMDVN-----CQDDGGWTPMIWATEYKHVDLVKLLLSKG-- 134 (237)
T ss_dssp TTSCCHH-HHHHHTTCHHHHHHHHTTT------------CCCTT-----CCCTTSCCHHHHHHHTTCHHHHHHHHHTT--
T ss_pred CCCCcHH-HHHHHcCCHHHHHHHHhCC------------CCCcc-----cCCCCCCCHHHHHHHcCCHHHHHHHHHCC--
Confidence 3566777 8899999999998887632 23578 8999999999 999999999999999864
Q ss_pred CccccccccccCCCCccCCC
Q 025881 92 STEAMVNAKEAGEFAAVNVP 111 (247)
Q Consensus 92 ~~~v~vn~~N~~G~TALDI~ 111 (247)
.++|..|..|.|||+.+
T Consensus 135 ---~~~~~~~~~g~t~L~~A 151 (237)
T 3b7b_A 135 ---SDINIRDNEENICLHWA 151 (237)
T ss_dssp ---CCTTCCCTTSCCHHHHH
T ss_pred ---CCCCccCCCCCCHHHHH
Confidence 48899999999999994
No 93
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=97.94 E-value=3.2e-06 Score=71.05 Aligned_cols=25 Identities=20% Similarity=0.225 Sum_probs=18.8
Q ss_pred hhhHHHHHHHHhhhcchhhHHHHHHH
Q 025881 13 EEGIAERKMVSDLSNRIDDLKVDLEW 38 (247)
Q Consensus 13 ~~~~~~~~~~~~~~~~~ealk~Lv~~ 38 (247)
.+|.+.+ ..|+++++.|.++.|++.
T Consensus 146 ~~g~t~L-~~A~~~~~~~~v~~Ll~~ 170 (285)
T 1wdy_A 146 KGGATAL-MDAAEKGHVEVLKILLDE 170 (285)
T ss_dssp CCCCCHH-HHHHHHTCHHHHHHHHHT
T ss_pred cCCCcHH-HHHHHcCCHHHHHHHHHh
Confidence 4466666 788888898888888764
No 94
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=97.92 E-value=7.3e-06 Score=68.87 Aligned_cols=74 Identities=12% Similarity=-0.055 Sum_probs=54.9
Q ss_pred hhHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcccccccccccCCCCCCC-CCCCCcee-eeecccchHHHHHHhhcCCC
Q 025881 14 EGIAERKMVSDLSNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGK-PLSSPVVL-ADMEHRQVKTVNSFLAETPE 91 (247)
Q Consensus 14 ~~~~~~~~~~~~~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~k-D~~GNTiL-LAv~~~~~kiv~~Ll~~~~~ 91 (247)
+|.+.+ ..|+++|++|.++.|++.- . -+| .+ |.+|+||| .|+..++.+++++|++.+
T Consensus 4 ~g~~~L-~~A~~~g~~~~v~~Ll~~g------------~-~~~-----~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-- 62 (285)
T 1wdy_A 4 EDNHLL-IKAVQNEDVDLVQQLLEGG------------A-NVN-----FQEEEGGWTPLHNAVQMSREDIVELLLRHG-- 62 (285)
T ss_dssp HHHHHH-HHHHHTTCHHHHHHHHHTT------------C-CTT-----CCCTTTCCCHHHHHHHTTCHHHHHHHHHTT--
T ss_pred ccchHH-HHHHHcCCHHHHHHHHHcC------------C-Ccc-----cccCCCCCcHHHHHHHcCCHHHHHHHHHcC--
Confidence 567777 7889999999888887521 1 244 44 77788888 888888888888888653
Q ss_pred CccccccccccCCCCccCCC
Q 025881 92 STEAMVNAKEAGEFAAVNVP 111 (247)
Q Consensus 92 ~~~v~vn~~N~~G~TALDI~ 111 (247)
.+++..|.+|.|||+.+
T Consensus 63 ---~~~~~~~~~g~t~L~~A 79 (285)
T 1wdy_A 63 ---ADPVLRKKNGATPFLLA 79 (285)
T ss_dssp ---CCTTCCCTTCCCHHHHH
T ss_pred ---CCCcccCCCCCCHHHHH
Confidence 46777888888888873
No 95
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=97.91 E-value=7.5e-06 Score=67.85 Aligned_cols=74 Identities=7% Similarity=-0.137 Sum_probs=49.4
Q ss_pred hhHHHHHHHHhhhcchh----hHHHHHHHHHHHhhhcccccccccccCCCCCCCCCCCCcee-eeecccc------hHHH
Q 025881 14 EGIAERKMVSDLSNRID----DLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLSSPVVL-ADMEHRQ------VKTV 82 (247)
Q Consensus 14 ~~~~~~~~~~~~~~~~e----alk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~GNTiL-LAv~~~~------~kiv 82 (247)
.|.+-+ +.|+.+++.+ .+++|++ . .-=+| .+|.+|+||| +|+..++ .+++
T Consensus 37 ~g~T~L-h~A~~~~~~~~~~~iv~~Ll~----~---------Gadvn-----~~d~~g~TpLh~a~~~~~~~~~~~~~iv 97 (186)
T 3t8k_A 37 LKSNIL-YDVLRNNNDEARYKISMFLIN----K---------GADIK-----SRTKEGTTLFFPLFQGGGNDITGTTELC 97 (186)
T ss_dssp HTTTHH-HHHTTCSCHHHHHHHHHHHHH----T---------TCCSS-----CCCTTCCCTHHHHHHHCTTCHHHHHHHH
T ss_pred CCCCHH-HHHHHcCCcchHHHHHHHHHH----C---------CCCCC-----CCCCCCCcHHHHHHHcCCcchhhHHHHH
Confidence 466666 7777777544 4444443 1 12367 7888888888 7777765 4677
Q ss_pred HHHhhcCCCCccccccccccCCC-CccCCC
Q 025881 83 NSFLAETPESTEAMVNAKEAGEF-AAVNVP 111 (247)
Q Consensus 83 ~~Ll~~~~~~~~v~vn~~N~~G~-TALDI~ 111 (247)
++|+..+ .++|++|+.|. |||+.+
T Consensus 98 ~~Ll~~G-----adin~~d~~g~ttpLh~A 122 (186)
T 3t8k_A 98 KIFLEKG-----ADITALYKPYKIVVFKNI 122 (186)
T ss_dssp HHHHHTT-----CCSSSCBGGGTBCTTGGG
T ss_pred HHHHHCC-----CCCCccCCCcCchHHHHH
Confidence 8787643 57788888888 788774
No 96
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=97.90 E-value=3.4e-06 Score=73.58 Aligned_cols=24 Identities=25% Similarity=0.342 Sum_probs=20.3
Q ss_pred hhhHHHHHHHHhhhcchhhHHHHHH
Q 025881 13 EEGIAERKMVSDLSNRIDDLKVDLE 37 (247)
Q Consensus 13 ~~~~~~~~~~~~~~~~~ealk~Lv~ 37 (247)
.+|.+-+ ++|+++|+.+.+++|++
T Consensus 84 ~~G~TpL-h~A~~~g~~~~v~~Ll~ 107 (269)
T 4b93_B 84 QDGSSPL-HVAALHGRADLIPLLLK 107 (269)
T ss_dssp TTSCCHH-HHHHHTTCTTHHHHHHH
T ss_pred CCCCCHH-HHHHHcCcHHHHHHHHh
Confidence 4677888 89999999999998875
No 97
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=97.90 E-value=3.6e-06 Score=76.61 Aligned_cols=24 Identities=21% Similarity=0.268 Sum_probs=13.8
Q ss_pred hhhHHHHHHHHhhhcchhhHHHHHH
Q 025881 13 EEGIAERKMVSDLSNRIDDLKVDLE 37 (247)
Q Consensus 13 ~~~~~~~~~~~~~~~~~ealk~Lv~ 37 (247)
+.|.+-+ ++|+++|+++.+|.|++
T Consensus 12 ~~g~t~L-~~Aa~~g~~~~v~~Ll~ 35 (437)
T 1n11_A 12 ESGLTPL-HVASFMGHLPIVKNLLQ 35 (437)
T ss_dssp ---CCHH-HHHHHHTCHHHHHHHHH
T ss_pred CCCCCHH-HHHHHCCCHHHHHHHHH
Confidence 4555666 66667777776666654
No 98
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=97.88 E-value=5.8e-06 Score=61.59 Aligned_cols=70 Identities=16% Similarity=0.068 Sum_probs=57.1
Q ss_pred hhHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCCCCCcee-eeecccchHHHHHHhhcCCCC
Q 025881 14 EGIAERKMVSDLSNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLSSPVVL-ADMEHRQVKTVNSFLAETPES 92 (247)
Q Consensus 14 ~~~~~~~~~~~~~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~GNTiL-LAv~~~~~kiv~~Ll~~~~~~ 92 (247)
+|.+-+ +.|+.+++.+++++|++. ..-+| .+|.+|+||| +|+..++.+++++|++.+
T Consensus 41 ~g~t~L-~~A~~~~~~~~~~~Ll~~-------------g~~~~-----~~d~~g~tpl~~A~~~~~~~~~~~Ll~~g--- 98 (115)
T 2l6b_A 41 DGNTPL-HLAAKNGHAEIVKLLLAK-------------GADVN-----ARSKDGNTPEHLAKKNGHHEIVKLLDAKG--- 98 (115)
T ss_dssp SSCCTT-HHHHTTTCHHHHHHHTTT-------------TCCTT-----CCCTTCCCTTHHHHTTTCHHHHHHHHTTS---
T ss_pred CCCCHH-HHHHHcCcHHHHHHHHHc-------------CCCCc-----ccCCCCCCHHHHHHHCCCHHHHHHHHHcC---
Confidence 455666 789999999998888752 12378 9999999999 999999999999999753
Q ss_pred ccccccccccCCCCc
Q 025881 93 TEAMVNAKEAGEFAA 107 (247)
Q Consensus 93 ~~v~vn~~N~~G~TA 107 (247)
.++|..|..|.|+
T Consensus 99 --a~~n~~~~~~~~~ 111 (115)
T 2l6b_A 99 --ADVNARSWGSSHH 111 (115)
T ss_dssp --SSHHHHSCCCC--
T ss_pred --CCCCcCCcccccc
Confidence 5899999999886
No 99
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=97.85 E-value=3.7e-06 Score=74.05 Aligned_cols=88 Identities=16% Similarity=0.168 Sum_probs=60.0
Q ss_pred hhHHHHHHHHhhhcchhhHHHHHHHHHH-Hh---hhccc-----------c----ccc------ccccCCCCCCCCCCCC
Q 025881 14 EGIAERKMVSDLSNRIDDLKVDLEWYKE-VS---RLKNK-----------S----YYD------SFNNSLGGAGKPLSSP 68 (247)
Q Consensus 14 ~~~~~~~~~~~~~~~~ealk~Lv~~~~~-~~---~~~~~-----------~----~~~------~llN~~~~~~kD~~GN 68 (247)
+|.+-+ +.|+++|+.|++|.|++...- .+ ..+.. . ... .=+| .+|.+|+
T Consensus 167 ~g~T~L-~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n-----~~d~~g~ 240 (337)
T 4g8k_A 167 GGATAL-MDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVN-----VRGERGK 240 (337)
T ss_dssp CSCCHH-HHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTT-----CCCGGGC
T ss_pred CCCcHH-HHHHHCCCHHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCC-----CcCCCCC
Confidence 466667 889999999999999853100 00 00000 0 000 1146 7888889
Q ss_pred cee-eeecccchHHHHHHhhcCCCCccccccccccCCCCccCCC
Q 025881 69 VVL-ADMEHRQVKTVNSFLAETPESTEAMVNAKEAGEFAAVNVP 111 (247)
Q Consensus 69 TiL-LAv~~~~~kiv~~Ll~~~~~~~~v~vn~~N~~G~TALDI~ 111 (247)
||| +|+..++.+++++|+... .+++|.+|++|.|||+++
T Consensus 241 t~L~~a~~~~~~~~v~~Ll~~~----~~~vn~~d~~G~TpL~~A 280 (337)
T 4g8k_A 241 TPLILAVEKKHLGLVQRLLEQE----HIEINDTDSDGKTALLLA 280 (337)
T ss_dssp CHHHHHHHTTCHHHHHHHHTST----TCCTTCBCTTSCBHHHHH
T ss_pred CHHHHHHHhhhhHHHHHHHHhc----CCcccCcCCCCCCHHHHH
Confidence 999 888888888888888642 267888888999988884
No 100
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=97.83 E-value=3.1e-06 Score=70.14 Aligned_cols=75 Identities=12% Similarity=-0.050 Sum_probs=56.5
Q ss_pred hhhHHHHHHHHhhhcch------hhHHHHHHHHHHHhhhcccccccccccCCCCCCCCCCCC-cee-eeeccc-----ch
Q 025881 13 EEGIAERKMVSDLSNRI------DDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLSSP-VVL-ADMEHR-----QV 79 (247)
Q Consensus 13 ~~~~~~~~~~~~~~~~~------ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~GN-TiL-LAv~~~-----~~ 79 (247)
.+|.+-+ ++++.+++. |.+++|++. ..=+| .+|.+|+ ||| .|+..+ ..
T Consensus 73 ~~g~TpL-h~a~~~~~~~~~~~~~iv~~Ll~~-------------Gadin-----~~d~~g~ttpLh~A~~~~~~~~~~~ 133 (186)
T 3t8k_A 73 KEGTTLF-FPLFQGGGNDITGTTELCKIFLEK-------------GADIT-----ALYKPYKIVVFKNIFNYFVDENEMI 133 (186)
T ss_dssp TTCCCTH-HHHHHHCTTCHHHHHHHHHHHHHT-------------TCCSS-----SCBGGGTBCTTGGGGGCCSCHHHHH
T ss_pred CCCCcHH-HHHHHcCCcchhhHHHHHHHHHHC-------------CCCCC-----ccCCCcCchHHHHHHHcCCChhhHH
Confidence 4567777 778888763 445555431 22489 9999999 999 999844 45
Q ss_pred HHHHHHhh-cCCCCccccccccccCCCCccCCC
Q 025881 80 KTVNSFLA-ETPESTEAMVNAKEAGEFAAVNVP 111 (247)
Q Consensus 80 kiv~~Ll~-~~~~~~~v~vn~~N~~G~TALDI~ 111 (247)
+++++|+. . +.++|++|+.|.||||++
T Consensus 134 ~iv~~Ll~~~-----gad~~~~d~~G~TpL~~A 161 (186)
T 3t8k_A 134 PLYKLIFSQS-----GLQLLIKDKWGLTALEFV 161 (186)
T ss_dssp HHHHHHHTST-----TCCTTCCCTTSCCHHHHH
T ss_pred HHHHHHHHhc-----CCCCcccCCCCCCHHHHH
Confidence 69999997 4 268999999999999994
No 101
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=97.83 E-value=5e-06 Score=72.44 Aligned_cols=71 Identities=13% Similarity=-0.015 Sum_probs=40.4
Q ss_pred hhHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCCCCCcee-eeecccchHHHHHHhhcCCCC
Q 025881 14 EGIAERKMVSDLSNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLSSPVVL-ADMEHRQVKTVNSFLAETPES 92 (247)
Q Consensus 14 ~~~~~~~~~~~~~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~GNTiL-LAv~~~~~kiv~~Ll~~~~~~ 92 (247)
+|.+.+ +.|+++|+.|.++.|++.= .-+| .+ +|+||| +|+..++.+++++|+..+
T Consensus 30 ~g~t~L-~~A~~~g~~~~v~~Ll~~g-------------~~~~-----~~--~g~t~L~~A~~~g~~~~v~~Ll~~g--- 85 (285)
T 3kea_A 30 HGHSAS-YYAIADNNVRLVCTLLNAG-------------ALKN-----LL--ENEFPLHQAATLEDTKIVKILLFSG--- 85 (285)
T ss_dssp TSCCHH-HHHHHTTCHHHHHHHHHTT-------------GGGS-----CC--TTCCHHHHHTTSSSCHHHHHHHHTT---
T ss_pred CCCCHH-HHHHHcCCHHHHHHHHhCC-------------CCCC-----CC--CCCCHHHHHHHcCCHHHHHHHHHCC---
Confidence 455555 6666777777666665420 0134 33 356666 666666666666666532
Q ss_pred ccccccccccCCCCccCC
Q 025881 93 TEAMVNAKEAGEFAAVNV 110 (247)
Q Consensus 93 ~~v~vn~~N~~G~TALDI 110 (247)
.++|..|..|.|||+.
T Consensus 86 --a~~~~~d~~g~t~L~~ 101 (285)
T 3kea_A 86 --LDDSQFDDKGNTALYY 101 (285)
T ss_dssp --CCTTCCCTTSCCHHHH
T ss_pred --CCCCCcCCCCCcHHHH
Confidence 3555666666666666
No 102
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=97.79 E-value=4.4e-06 Score=75.56 Aligned_cols=81 Identities=11% Similarity=-0.046 Sum_probs=66.4
Q ss_pred hhHHHHHHHHhhhcchhhHHHHHHHH-HHHhhhcccccccccccCCCCCCCCCCCCcee-eeecccchHHHHHHhhcCCC
Q 025881 14 EGIAERKMVSDLSNRIDDLKVDLEWY-KEVSRLKNKSYYDSFNNSLGGAGKPLSSPVVL-ADMEHRQVKTVNSFLAETPE 91 (247)
Q Consensus 14 ~~~~~~~~~~~~~~~~ealk~Lv~~~-~~~~~~~~~~~~~~llN~~~~~~kD~~GNTiL-LAv~~~~~kiv~~Ll~~~~~ 91 (247)
+|.+-+ +.|+.+++.+.++.|+... +..-+ ...-+| .+|.+|+||| +|+..++.+++++|+..+
T Consensus 124 ~g~t~L-h~Aa~~g~~~~v~~Ll~~~~~~ll~------~ga~vn-----~~d~~g~TpL~~A~~~g~~~iv~~Ll~~g-- 189 (373)
T 2fo1_E 124 HNRTVL-HWIASNSSAEKSEDLIVHEAKECIA------AGADVN-----AMDCDENTPLMLAVLARRRRLVAYLMKAG-- 189 (373)
T ss_dssp SCCCHH-HHHHCTTCCSCCTTHHHHHHHHHHH------TCCCTT-----CCCTTSCCHHHHHHHHTCHHHHHHHHHTT--
T ss_pred CCCCHH-HHHHHCCCHHHHHHHHHHHHHHHHh------cCCCCc-----CCCCCCCCHHHHHHHcChHHHHHHHHHCC--
Confidence 577788 8999999999999988532 22111 223478 9999999999 999999999999999864
Q ss_pred CccccccccccCCCCccCCC
Q 025881 92 STEAMVNAKEAGEFAAVNVP 111 (247)
Q Consensus 92 ~~~v~vn~~N~~G~TALDI~ 111 (247)
.++|..|.+|.|||+.+
T Consensus 190 ---a~~~~~~~~g~t~L~~A 206 (373)
T 2fo1_E 190 ---ADPTIYNKSERSALHQA 206 (373)
T ss_dssp ---CCSCCCCTTCCCHHHHH
T ss_pred ---CCCcccCCCCCCHHHHH
Confidence 58899999999999994
No 103
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=97.75 E-value=8.8e-06 Score=70.90 Aligned_cols=73 Identities=8% Similarity=-0.100 Sum_probs=60.4
Q ss_pred hHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCCCCCcee-eeecccchHHHHHHhhcCCCCc
Q 025881 15 GIAERKMVSDLSNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLSSPVVL-ADMEHRQVKTVNSFLAETPEST 93 (247)
Q Consensus 15 ~~~~~~~~~~~~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~GNTiL-LAv~~~~~kiv~~Ll~~~~~~~ 93 (247)
|.+-+ +.|+++++.+.++.|++. ..-+| .+|.+|+||| +|+..++.+++++|+..+
T Consensus 62 g~t~L-~~A~~~g~~~~v~~Ll~~-------------ga~~~-----~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g---- 118 (285)
T 3kea_A 62 NEFPL-HQAATLEDTKIVKILLFS-------------GLDDS-----QFDDKGNTALYYAVDSGNMQTVKLFVKKN---- 118 (285)
T ss_dssp TCCHH-HHHTTSSSCHHHHHHHHT-------------TCCTT-----CCCTTSCCHHHHHHHTTCHHHHHHHHHHC----
T ss_pred CCCHH-HHHHHcCCHHHHHHHHHC-------------CCCCC-----CcCCCCCcHHHHHHHcCCHHHHHHHHhcC----
Confidence 45556 789999999999988862 11278 8999999999 999999999999999753
Q ss_pred cccccccccCC-CCccCCC
Q 025881 94 EAMVNAKEAGE-FAAVNVP 111 (247)
Q Consensus 94 ~v~vn~~N~~G-~TALDI~ 111 (247)
.++|..|..| .|||+.+
T Consensus 119 -a~~~~~~~~g~~t~L~~A 136 (285)
T 3kea_A 119 -WRLMFYGKTGWKTSFYHA 136 (285)
T ss_dssp -GGGGGCSSSGGGSHHHHH
T ss_pred -CCCCccCCCCCCCHHHHH
Confidence 5889999999 8999984
No 104
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=97.68 E-value=2e-05 Score=56.74 Aligned_cols=56 Identities=16% Similarity=0.156 Sum_probs=48.2
Q ss_pred hhHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCCCCCcee-eeecccchHHHHHHhhc
Q 025881 14 EGIAERKMVSDLSNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLSSPVVL-ADMEHRQVKTVNSFLAE 88 (247)
Q Consensus 14 ~~~~~~~~~~~~~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~GNTiL-LAv~~~~~kiv~~Ll~~ 88 (247)
+|.+-+ +.|+++++.|.+++|++. ..-+| .+|.+|+||| +|+..++.+++++|++.
T Consensus 34 ~g~t~L-~~A~~~~~~~~v~~Ll~~-------------ga~~~-----~~d~~g~t~l~~A~~~~~~~~~~~Ll~~ 90 (93)
T 1n0q_A 34 NGRTPL-HLAARNGHLEVVKLLLEA-------------GADVN-----AKDKNGRTPLHLAARNGHLEVVKLLLEA 90 (93)
T ss_dssp TSCCHH-HHHHHTTCHHHHHHHHHT-------------TCCTT-----CCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred CCCCHH-HHHHHcCCHHHHHHHHHc-------------CCCCC-----ccCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 577777 899999999999988752 12378 9999999999 99999999999999875
No 105
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=97.64 E-value=6.7e-06 Score=73.16 Aligned_cols=44 Identities=5% Similarity=-0.191 Sum_probs=32.8
Q ss_pred C-CCCCCCcee-eeecccchHHHHHHhhcCCCCccccccccccCCCCccCC
Q 025881 62 G-KPLSSPVVL-ADMEHRQVKTVNSFLAETPESTEAMVNAKEAGEFAAVNV 110 (247)
Q Consensus 62 ~-kD~~GNTiL-LAv~~~~~kiv~~Ll~~~~~~~~v~vn~~N~~G~TALDI 110 (247)
. +|.+|+||| +|+..++.+++++|++.+ .++|..|.+|.|||++
T Consensus 125 ~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~G-----ad~n~~d~~g~TpLh~ 170 (327)
T 1sw6_A 125 IPVDEHGNTPLHWLTSIANLELVKHLVKHG-----SNRLYGDNMGESCLVK 170 (327)
T ss_dssp SCCSTTCCCHHHHHHHTTCHHHHHHHHHTT-----CCTTBCCTTCCCHHHH
T ss_pred cccCCCCCcHHHHHHHcCCHHHHHHHHHcC-----CCCCCcCCCCCCHHHH
Confidence 6 677777777 777777777777777643 4677777777777777
No 106
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=97.64 E-value=2.2e-05 Score=68.92 Aligned_cols=74 Identities=7% Similarity=-0.086 Sum_probs=57.6
Q ss_pred HHHhhhcchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCCCCCcee-eeecc---cchHHHHHHhhcCCCCcccc
Q 025881 21 MVSDLSNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLSSPVVL-ADMEH---RQVKTVNSFLAETPESTEAM 96 (247)
Q Consensus 21 ~~~~~~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~GNTiL-LAv~~---~~~kiv~~Ll~~~~~~~~v~ 96 (247)
..|++++.++.++.+++.= .+....-.++ ..|.+|+||| +|+.. ++.+++++|+..+ .+
T Consensus 135 ~~a~~~~d~~~~~~ll~~g-------~~~~~~~~l~-----~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~g-----a~ 197 (278)
T 1dcq_A 135 CEAVKTRDIFGLLQAYADG-------VDLTEKIPLA-----NGHEPDETALHLAVRSVDRTSLHIVDFLVQNS-----GN 197 (278)
T ss_dssp HHHHHTTCHHHHHHHHHTT-------CCTTSBCCCS-----SCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHC-----SC
T ss_pred hhHhhhcccHHHHHHHHhh-------cchhhhcccc-----ccccCCCCcchHHHHhcccchHHHHHHHHHCC-----CC
Confidence 5677888888877665421 1111122388 8899999999 99999 8999999999864 58
Q ss_pred ccccccCCCCccCCC
Q 025881 97 VNAKEAGEFAAVNVP 111 (247)
Q Consensus 97 vn~~N~~G~TALDI~ 111 (247)
+|.+|.+|.|||+++
T Consensus 198 in~~d~~g~TpLh~A 212 (278)
T 1dcq_A 198 LDKQTGKGSTALHYC 212 (278)
T ss_dssp TTCCCTTCCCHHHHH
T ss_pred ccccCCCCCCHHHHH
Confidence 999999999999994
No 107
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=97.62 E-value=2.4e-05 Score=64.15 Aligned_cols=76 Identities=12% Similarity=0.047 Sum_probs=57.6
Q ss_pred hhhHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCCCCCcee-eeecccchHHHHHHhhcCCC
Q 025881 13 EEGIAERKMVSDLSNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLSSPVVL-ADMEHRQVKTVNSFLAETPE 91 (247)
Q Consensus 13 ~~~~~~~~~~~~~~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~GNTiL-LAv~~~~~kiv~~Ll~~~~~ 91 (247)
.+|.+.+ ..|+++++.+.++.|++- ...+.+ ..|..|+||| +|+..++.+++++|++.+
T Consensus 40 ~~g~t~L-~~A~~~~~~~~v~~Ll~~------------~~~~~~-----~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g-- 99 (240)
T 3eu9_A 40 KENVTLL-HWAAINNRIDLVKYYISK------------GAIVDQ-----LGGDLNSTPLHWATRQGHLSMVVQLMKYG-- 99 (240)
T ss_dssp TTSCCHH-HHHHHTTCHHHHHHHHHT------------TCCTTC-----CBTTTTBCHHHHHHHHTCHHHHHHHHHTT--
T ss_pred CCCCCHH-HHHHHhCCHHHHHHHHHc------------CCcchh-----hcCCcCCChhHHHHHcCCHHHHHHHHHcC--
Confidence 4577777 789999999988888752 123444 5666788888 888888888888888753
Q ss_pred CccccccccccCCCCccCCC
Q 025881 92 STEAMVNAKEAGEFAAVNVP 111 (247)
Q Consensus 92 ~~~v~vn~~N~~G~TALDI~ 111 (247)
.+++..|..|.|||+.+
T Consensus 100 ---~~~~~~~~~g~t~l~~A 116 (240)
T 3eu9_A 100 ---ADPSLIDGEGCSCIHLA 116 (240)
T ss_dssp ---CCTTCCCTTSCCHHHHH
T ss_pred ---CCCcccCCCCCCHHHHH
Confidence 47788888888888883
No 108
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=97.59 E-value=2.2e-05 Score=64.36 Aligned_cols=74 Identities=5% Similarity=-0.041 Sum_probs=58.2
Q ss_pred hhHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCCCCCcee-eeecccchHHHHHHhhcCCCC
Q 025881 14 EGIAERKMVSDLSNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLSSPVVL-ADMEHRQVKTVNSFLAETPES 92 (247)
Q Consensus 14 ~~~~~~~~~~~~~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~GNTiL-LAv~~~~~kiv~~Ll~~~~~~ 92 (247)
.|.+.+ ..|+++|++|.++.|++. ..-+| .+|.+|+||| .|+..++.+++++|++.+.
T Consensus 8 ~~~~~l-~~A~~~g~~~~~~~Ll~~-------------g~~~~-----~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~-- 66 (240)
T 3eu9_A 8 YSTWDI-VKATQYGIYERCRELVEA-------------GYDVR-----QPDKENVTLLHWAAINNRIDLVKYYISKGA-- 66 (240)
T ss_dssp GGGCCH-HHHHHTTCHHHHHHHHHT-------------TCCTT-----CCCTTSCCHHHHHHHTTCHHHHHHHHHTTC--
T ss_pred ccchHH-HHHHHcCChHHHHHHHHc-------------CCCcC-----CCCCCCCCHHHHHHHhCCHHHHHHHHHcCC--
Confidence 344445 679999999999998861 12378 8999999999 9999999999999998643
Q ss_pred cccccc-ccccCCCCccCCC
Q 025881 93 TEAMVN-AKEAGEFAAVNVP 111 (247)
Q Consensus 93 ~~v~vn-~~N~~G~TALDI~ 111 (247)
+++ ..+..|.|||+++
T Consensus 67 ---~~~~~~~~~~~t~L~~A 83 (240)
T 3eu9_A 67 ---IVDQLGGDLNSTPLHWA 83 (240)
T ss_dssp ---CTTCCBTTTTBCHHHHH
T ss_pred ---cchhhcCCcCCChhHHH
Confidence 444 4445599999994
No 109
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=97.38 E-value=6.5e-05 Score=66.67 Aligned_cols=69 Identities=13% Similarity=0.041 Sum_probs=56.1
Q ss_pred hhhHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCCCCCcee-eeecccchHHHHHHhhcCCC
Q 025881 13 EEGIAERKMVSDLSNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLSSPVVL-ADMEHRQVKTVNSFLAETPE 91 (247)
Q Consensus 13 ~~~~~~~~~~~~~~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~GNTiL-LAv~~~~~kiv~~Ll~~~~~ 91 (247)
.+|.|-+ +.|+++++.+++++|++. ..=+| .+|.+|+||| +|+..++.+++++|+..+
T Consensus 224 ~~G~TpL-h~A~~~g~~~~v~~Ll~~-------------gad~~-----~~d~~G~TpL~~A~~~~~~~iv~~Ll~~g-- 282 (301)
T 2b0o_E 224 ADGNTAL-HYAALYNQPDCLKLLLKG-------------RALVG-----TVNEAGETALDIARKKHHKECEELLEQAQ-- 282 (301)
T ss_dssp TTCCCHH-HHHHHTTCHHHHHHHHHT-------------TCCCS-----CCCTTSCCHHHHHHHHTCHHHHHHHHHHH--
T ss_pred CCCCCHH-HHHHHcCCHHHHHHHHHc-------------CCCCC-----CcCCCCCCHHHHHHHcCCHHHHHHHHHhc--
Confidence 4677888 899999999999999862 11378 9999999999 999999999999998642
Q ss_pred CccccccccccCCCCccCCC
Q 025881 92 STEAMVNAKEAGEFAAVNVP 111 (247)
Q Consensus 92 ~~~v~vn~~N~~G~TALDI~ 111 (247)
...|.||||++
T Consensus 283 ---------a~~g~tpLh~A 293 (301)
T 2b0o_E 283 ---------AGTFAFPLHVD 293 (301)
T ss_dssp ---------HHTTSSCCC--
T ss_pred ---------CCCCCChhHHH
Confidence 12689999985
No 110
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=97.36 E-value=0.00011 Score=67.84 Aligned_cols=68 Identities=12% Similarity=0.032 Sum_probs=53.9
Q ss_pred HHHhhhcchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCCCCCcee-eeecccchHHHHHHhhcCCCCccccccc
Q 025881 21 MVSDLSNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLSSPVVL-ADMEHRQVKTVNSFLAETPESTEAMVNA 99 (247)
Q Consensus 21 ~~~~~~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~GNTiL-LAv~~~~~kiv~~Ll~~~~~~~~v~vn~ 99 (247)
++|+.+++.+++++|++. ..-+| .+|.+|+||| +|+..++.+++++|+..+ .++|+
T Consensus 240 h~Aa~~g~~~iv~~LL~~-------------Gadvn-----~~d~~G~TpLh~A~~~g~~~~v~~LL~~G-----ad~~~ 296 (368)
T 3jue_A 240 IQATAANSLLACEFLLQN-------------GANVN-----QADSAGRGPLHHATILGHTGLACLFLKRG-----ADLGA 296 (368)
T ss_dssp HHHHHTTCHHHHHHHHHT-------------TCCTT-----CCCTTSCCHHHHHHHHTCHHHHHHHHHTT-----CCTTC
T ss_pred HHHHHCCCHHHHHHHHHc-------------CCCCC-----CCCCCCCCHHHHHHHcCcHHHHHHHHHCc-----CCCCC
Confidence 455555555555555541 12378 8999999999 999999999999999863 58999
Q ss_pred cccCCCCccCCC
Q 025881 100 KEAGEFAAVNVP 111 (247)
Q Consensus 100 ~N~~G~TALDI~ 111 (247)
.|++|.||||++
T Consensus 297 ~d~~G~TpL~~A 308 (368)
T 3jue_A 297 RDSEGRDPLTIA 308 (368)
T ss_dssp CCTTSCCHHHHH
T ss_pred cCCCCCCHHHHH
Confidence 999999999995
No 111
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=97.26 E-value=0.00013 Score=68.88 Aligned_cols=73 Identities=12% Similarity=0.078 Sum_probs=56.4
Q ss_pred HHHhhhcchhhHHHHHHHHHHHhhhcccccccccccC-CCCCCCCCCCCcee-ee---ecccchHHHHHHhhcCCCCccc
Q 025881 21 MVSDLSNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNS-LGGAGKPLSSPVVL-AD---MEHRQVKTVNSFLAETPESTEA 95 (247)
Q Consensus 21 ~~~~~~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~-~~~~~kD~~GNTiL-LA---v~~~~~kiv~~Ll~~~~~~~~v 95 (247)
..|+++|+.++++.|++.=- =+|. ..+...|.+|+||| +| +..++.+++++|+..+ .
T Consensus 137 ~~A~~~g~~~~v~~ll~~g~-------------~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~g-----a 198 (497)
T 3lvq_E 137 WTAICNRDLLSVLEAFANGQ-------------DFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNG-----G 198 (497)
T ss_dssp HHHHHHTCHHHHHHHHHTTC-------------CSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHS-----C
T ss_pred HHHHhccCHHHHHHHHhhcc-------------cccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcC-----C
Confidence 67899999999998876321 1330 00013499999999 99 5599999999999864 5
Q ss_pred cccccccCCCCccCCC
Q 025881 96 MVNAKEAGEFAAVNVP 111 (247)
Q Consensus 96 ~vn~~N~~G~TALDI~ 111 (247)
++|+.|.+|.|||+++
T Consensus 199 ~vn~~d~~g~TpLh~A 214 (497)
T 3lvq_E 199 HLDAKAADGNTALHYA 214 (497)
T ss_dssp CTTCCCSSSCCHHHHH
T ss_pred CCCccCCCCCcHHHHH
Confidence 8999999999999993
No 112
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=97.17 E-value=3.1e-05 Score=57.81 Aligned_cols=51 Identities=16% Similarity=0.044 Sum_probs=38.8
Q ss_pred ccccccCCCCCCCCCCCCcee-eeecccchHHHHHHhhcCCCCccccccccccCCCCccCCC
Q 025881 51 YDSFNNSLGGAGKPLSSPVVL-ADMEHRQVKTVNSFLAETPESTEAMVNAKEAGEFAAVNVP 111 (247)
Q Consensus 51 ~~~llN~~~~~~kD~~GNTiL-LAv~~~~~kiv~~Ll~~~~~~~~v~vn~~N~~G~TALDI~ 111 (247)
.+...+ ..|.+|+|+| .|+..++.+++++|++.+ .++|..|..|.|||+++
T Consensus 13 ~~~~~~-----~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-----~~i~~~d~~g~tpLh~A 64 (110)
T 2zgd_A 13 LVPRGS-----HMGSDLGKKLLEAARAGQDDEVRILMANG-----ADVAAKDKNGSTPLHLA 64 (110)
T ss_dssp --------------CCHHHHHHHHHHHTCHHHHHHHHHTT-----CCTTCCCTTCCCHHHHH
T ss_pred CCCccc-----ccCCccchHHHHHHHcCCHHHHHHHHHcC-----CCCCccCCCCCCHHHHH
Confidence 455667 8999999999 999999999999999753 58899999999999984
No 113
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=96.45 E-value=7.1e-05 Score=69.14 Aligned_cols=75 Identities=9% Similarity=0.012 Sum_probs=43.2
Q ss_pred hhHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCCCCCcee-eeecccchHHHHHHhhcCCCC
Q 025881 14 EGIAERKMVSDLSNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLSSPVVL-ADMEHRQVKTVNSFLAETPES 92 (247)
Q Consensus 14 ~~~~~~~~~~~~~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~GNTiL-LAv~~~~~kiv~~Ll~~~~~~ 92 (247)
+|.+-+ +.|+++|+.|++|+|++.=-+ ....| .++.+ +||| .|+.+++.+++++|++.+
T Consensus 127 ~~~tpL-~~Aa~~G~~eiv~~Ll~~gad----------~~~~~-----i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~g--- 186 (376)
T 2aja_A 127 ENYQAF-RLAAENGHLHVLNRLCELAPT----------EIMAM-----IQAEN-YHAFRLAAENGHLHVLNRLCELA--- 186 (376)
T ss_dssp HHHHHH-HHHHHTTCHHHHHHHHHSCTT----------THHHH-----HSHHH-HHHHHHHHHTTCHHHHHHHHHSC---
T ss_pred CCCCHH-HHHHHcCCHHHHHHHHhCCCC----------ccccc-----cCCCC-CCHHHHHHHCCCHHHHHHHHHcC---
Confidence 344544 667777777777766642100 00111 22222 6777 777777777777777653
Q ss_pred ccccccc--cccCCCCccCC
Q 025881 93 TEAMVNA--KEAGEFAAVNV 110 (247)
Q Consensus 93 ~~v~vn~--~N~~G~TALDI 110 (247)
.+++. .|.+|.|||++
T Consensus 187 --a~~~~~~~d~~g~TpL~~ 204 (376)
T 2aja_A 187 --PTEATAMIQAENYYAFRW 204 (376)
T ss_dssp --GGGHHHHHHHHHHHHHHH
T ss_pred --CccchhccCCCCCCHHHH
Confidence 24444 67777777776
No 114
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=95.63 E-value=0.00062 Score=62.75 Aligned_cols=78 Identities=10% Similarity=0.080 Sum_probs=53.6
Q ss_pred hHHHHHHHHhhhcchhhHHHHHHHHHHHhhhcccccccccccCCCCCCCCCCCCcee-eeecccchHHHHHHhhcCCCCc
Q 025881 15 GIAERKMVSDLSNRIDDLKVDLEWYKEVSRLKNKSYYDSFNNSLGGAGKPLSSPVVL-ADMEHRQVKTVNSFLAETPEST 93 (247)
Q Consensus 15 ~~~~~~~~~~~~~~~ealk~Lv~~~~~~~~~~~~~~~~~llN~~~~~~kD~~GNTiL-LAv~~~~~kiv~~Ll~~~~~~~ 93 (247)
+.+.+ +.|+++|+.|.+|.|++.-. .....+ ..|.+|+||| +|+.+++.+++++|++.+....
T Consensus 92 ~~T~L-h~Aa~~G~~e~v~~Ll~~ga----------~~~~~~-----~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~ 155 (376)
T 2aja_A 92 SEVIC-FVAAITGCSSALDTLCLLLT----------SDEIVK-----VIQAENYQAFRLAAENGHLHVLNRLCELAPTEI 155 (376)
T ss_dssp HHHHH-HHHHHHCCHHHHHHHTTC------------CCSSCC-------CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTH
T ss_pred cCCHH-HHHHHcCCHHHHHHHHHcCC----------cHHHHH-----HhccCCCCHHHHHHHcCCHHHHHHHHhCCCCcc
Confidence 45666 88999999999998876321 122334 5567889999 9999999999999998752100
Q ss_pred cccccccccCCCCccCCC
Q 025881 94 EAMVNAKEAGEFAAVNVP 111 (247)
Q Consensus 94 ~v~vn~~N~~G~TALDI~ 111 (247)
..++.+.+ .|||+++
T Consensus 156 --~~~i~~~~-~TpLh~A 170 (376)
T 2aja_A 156 --MAMIQAEN-YHAFRLA 170 (376)
T ss_dssp --HHHHSHHH-HHHHHHH
T ss_pred --ccccCCCC-CCHHHHH
Confidence 12333333 9999994
Done!