Query 025885
Match_columns 247
No_of_seqs 336 out of 2790
Neff 9.2
Searched_HMMs 46136
Date Fri Mar 29 10:38:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025885.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/025885hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4178 Soluble epoxide hydrol 100.0 1.1E-41 2.4E-46 282.2 18.6 227 2-238 20-248 (322)
2 PRK03592 haloalkane dehalogena 99.9 7.7E-25 1.7E-29 185.7 17.8 121 4-127 7-127 (295)
3 PLN02824 hydrolase, alpha/beta 99.9 5.1E-25 1.1E-29 186.7 16.7 125 3-128 7-137 (294)
4 PRK00870 haloalkane dehalogena 99.9 9.3E-25 2E-29 185.9 17.5 124 4-127 19-149 (302)
5 PLN02679 hydrolase, alpha/beta 99.9 8.7E-23 1.9E-27 178.0 22.0 120 7-128 64-191 (360)
6 PRK03204 haloalkane dehalogena 99.9 2.2E-23 4.8E-28 176.3 16.1 123 4-128 14-136 (286)
7 TIGR02240 PHA_depoly_arom poly 99.9 1.2E-23 2.6E-28 176.8 14.2 121 5-128 3-126 (276)
8 PLN02578 hydrolase 99.9 3.1E-22 6.7E-27 174.2 16.6 120 6-128 68-187 (354)
9 TIGR03343 biphenyl_bphD 2-hydr 99.9 2.7E-22 5.8E-27 168.6 15.3 124 4-128 5-136 (282)
10 TIGR03056 bchO_mg_che_rel puta 99.9 8.7E-22 1.9E-26 164.5 15.8 122 5-128 7-130 (278)
11 PLN03084 alpha/beta hydrolase 99.9 8.7E-22 1.9E-26 172.2 16.1 122 7-129 108-233 (383)
12 PLN03087 BODYGUARD 1 domain co 99.9 1.3E-21 2.9E-26 174.6 17.2 126 3-129 175-310 (481)
13 PLN02965 Probable pheophorbida 99.9 8.5E-22 1.8E-26 163.8 13.1 101 26-127 5-106 (255)
14 PRK06489 hypothetical protein; 99.9 1.2E-21 2.6E-26 170.9 13.5 117 11-127 47-188 (360)
15 PRK10749 lysophospholipase L2; 99.9 1.4E-20 2.9E-25 162.4 16.8 124 5-128 32-166 (330)
16 PRK10673 acyl-CoA esterase; Pr 99.9 6E-21 1.3E-25 158.0 13.8 101 23-127 15-115 (255)
17 PLN02211 methyl indole-3-aceta 99.9 5.6E-21 1.2E-25 160.6 13.5 116 11-127 4-121 (273)
18 PRK10349 carboxylesterase BioH 99.9 6E-21 1.3E-25 158.5 11.9 104 16-127 4-108 (256)
19 PRK11126 2-succinyl-6-hydroxy- 99.9 1E-20 2.2E-25 155.5 13.1 99 24-127 2-101 (242)
20 PLN02385 hydrolase; alpha/beta 99.8 1.7E-20 3.8E-25 162.9 14.7 120 8-128 66-197 (349)
21 PRK08775 homoserine O-acetyltr 99.8 7.1E-21 1.5E-25 165.0 10.4 117 8-128 40-173 (343)
22 TIGR01249 pro_imino_pep_1 prol 99.8 3E-20 6.4E-25 158.6 13.8 123 5-128 5-130 (306)
23 TIGR03611 RutD pyrimidine util 99.8 2.5E-20 5.3E-25 153.3 12.6 111 16-128 1-115 (257)
24 PF12697 Abhydrolase_6: Alpha/ 99.8 2.9E-20 6.2E-25 149.2 12.4 102 27-129 1-102 (228)
25 TIGR01250 pro_imino_pep_2 prol 99.8 1E-19 2.2E-24 151.7 15.2 121 8-128 6-131 (288)
26 PLN02298 hydrolase, alpha/beta 99.8 1E-19 2.2E-24 156.9 15.3 119 9-128 38-169 (330)
27 PRK07581 hypothetical protein; 99.8 2.3E-20 5E-25 161.5 10.1 119 10-128 22-159 (339)
28 PHA02857 monoglyceride lipase; 99.8 1.8E-19 3.9E-24 151.2 15.0 121 7-128 4-132 (276)
29 TIGR02427 protocat_pcaD 3-oxoa 99.8 6E-20 1.3E-24 149.8 11.0 110 16-128 2-114 (251)
30 TIGR01392 homoserO_Ac_trn homo 99.8 6.6E-20 1.4E-24 159.4 11.6 119 10-128 12-162 (351)
31 TIGR03695 menH_SHCHC 2-succiny 99.8 2.4E-19 5.2E-24 145.9 13.0 104 24-128 1-105 (251)
32 PRK00175 metX homoserine O-ace 99.8 1.5E-19 3.3E-24 158.7 11.9 118 11-128 30-182 (379)
33 PRK05855 short chain dehydroge 99.8 9.9E-19 2.2E-23 161.0 14.6 123 4-127 3-130 (582)
34 PRK14875 acetoin dehydrogenase 99.8 1.6E-18 3.5E-23 151.2 14.9 119 7-128 112-232 (371)
35 KOG4409 Predicted hydrolase/ac 99.8 1.2E-18 2.5E-23 145.9 11.7 108 23-131 89-198 (365)
36 TIGR01738 bioH putative pimelo 99.8 1.2E-18 2.5E-23 141.8 10.2 98 22-127 1-99 (245)
37 PLN02894 hydrolase, alpha/beta 99.8 1.5E-17 3.3E-22 147.0 16.0 104 23-128 104-211 (402)
38 COG2267 PldB Lysophospholipase 99.8 1.9E-17 4.2E-22 140.5 15.3 125 5-130 11-144 (298)
39 TIGR03101 hydr2_PEP hydrolase, 99.8 2.6E-17 5.6E-22 137.1 15.5 103 24-128 25-134 (266)
40 PLN02980 2-oxoglutarate decarb 99.7 6.2E-17 1.3E-21 163.3 16.2 123 4-127 1344-1479(1655)
41 KOG1454 Predicted hydrolase/ac 99.7 2.8E-17 6E-22 141.0 10.4 106 23-128 57-166 (326)
42 PLN02652 hydrolase; alpha/beta 99.7 1.5E-16 3.2E-21 140.1 14.8 115 12-128 119-245 (395)
43 COG1647 Esterase/lipase [Gener 99.7 7.3E-17 1.6E-21 127.0 11.1 103 24-130 15-120 (243)
44 PLN02511 hydrolase 99.7 2.2E-16 4.9E-21 138.9 13.2 105 23-129 99-211 (388)
45 KOG2564 Predicted acetyltransf 99.7 5.1E-16 1.1E-20 126.0 11.0 103 23-127 73-181 (343)
46 TIGR03100 hydr1_PEP hydrolase, 99.6 9.5E-15 2.1E-19 122.9 16.6 117 8-129 6-135 (274)
47 TIGR01607 PST-A Plasmodium sub 99.6 2.2E-15 4.7E-20 130.1 12.2 119 10-128 4-185 (332)
48 PRK10985 putative hydrolase; P 99.6 1.4E-14 3.1E-19 124.7 15.9 105 24-129 58-169 (324)
49 TIGR03230 lipo_lipase lipoprot 99.6 7.1E-15 1.5E-19 129.5 14.0 105 23-129 40-155 (442)
50 PRK05077 frsA fermentation/res 99.6 1.6E-14 3.4E-19 128.1 16.2 103 24-128 194-300 (414)
51 PRK10566 esterase; Provisional 99.6 1.1E-14 2.4E-19 120.4 14.3 110 15-124 14-138 (249)
52 PRK11071 esterase YqiA; Provis 99.6 5.3E-15 1.1E-19 117.8 11.2 89 25-129 2-94 (190)
53 KOG1455 Lysophospholipase [Lip 99.6 1.5E-14 3.2E-19 119.3 13.7 118 10-128 34-164 (313)
54 PRK13604 luxD acyl transferase 99.6 3.7E-14 8.1E-19 119.3 14.0 114 11-128 17-141 (307)
55 PRK06765 homoserine O-acetyltr 99.6 1.1E-14 2.4E-19 127.8 11.3 117 12-128 39-196 (389)
56 cd00707 Pancreat_lipase_like P 99.6 9.9E-15 2.2E-19 122.7 9.8 105 23-129 35-148 (275)
57 TIGR01836 PHA_synth_III_C poly 99.6 1.6E-14 3.4E-19 125.7 11.2 113 12-129 46-172 (350)
58 COG0596 MhpC Predicted hydrola 99.6 6.1E-14 1.3E-18 113.8 13.7 116 10-129 6-124 (282)
59 PLN02872 triacylglycerol lipas 99.6 1.4E-14 3E-19 127.3 9.6 123 5-128 45-197 (395)
60 PF00561 Abhydrolase_1: alpha/ 99.5 3.2E-14 7E-19 115.1 8.9 76 52-127 1-78 (230)
61 PF12695 Abhydrolase_5: Alpha/ 99.5 1E-13 2.2E-18 104.8 10.5 93 26-126 1-93 (145)
62 KOG2565 Predicted hydrolases o 99.5 4.4E-14 9.6E-19 118.8 9.0 118 5-123 125-259 (469)
63 PF06342 DUF1057: Alpha/beta h 99.5 9.6E-13 2.1E-17 107.9 15.8 109 26-137 37-146 (297)
64 TIGR01838 PHA_synth_I poly(R)- 99.5 1.4E-13 2.9E-18 124.6 11.8 108 23-130 187-304 (532)
65 TIGR03502 lipase_Pla1_cef extr 99.5 3.7E-13 7.9E-18 125.6 13.2 109 7-115 421-577 (792)
66 PLN00021 chlorophyllase 99.5 2.8E-13 6.1E-18 115.6 11.1 104 22-127 50-165 (313)
67 KOG2382 Predicted alpha/beta h 99.5 2.9E-13 6.3E-18 113.1 10.5 103 23-128 51-159 (315)
68 KOG2984 Predicted hydrolase [G 99.5 7.2E-14 1.6E-18 108.7 5.4 122 4-127 21-148 (277)
69 TIGR01840 esterase_phb esteras 99.4 1.9E-12 4.1E-17 104.8 12.6 106 23-128 12-130 (212)
70 TIGR02821 fghA_ester_D S-formy 99.4 4.5E-12 9.9E-17 106.6 14.8 107 23-129 41-174 (275)
71 PRK07868 acyl-CoA synthetase; 99.4 1E-12 2.3E-17 128.3 11.9 103 23-128 66-177 (994)
72 TIGR00976 /NonD putative hydro 99.4 1.5E-12 3.2E-17 119.7 11.2 114 12-128 5-132 (550)
73 PF12146 Hydrolase_4: Putative 99.3 9.4E-12 2E-16 84.5 8.7 75 13-88 1-79 (79)
74 PLN02442 S-formylglutathione h 99.3 1.9E-11 4.1E-16 103.3 12.2 106 24-129 47-179 (283)
75 PF07819 PGAP1: PGAP1-like pro 99.3 5.8E-11 1.3E-15 96.9 12.4 107 23-130 3-125 (225)
76 PRK11460 putative hydrolase; P 99.3 9.9E-11 2.1E-15 96.1 12.7 106 23-128 15-138 (232)
77 COG2021 MET2 Homoserine acetyl 99.2 5.7E-11 1.2E-15 100.9 10.2 117 12-128 34-182 (368)
78 PF00975 Thioesterase: Thioest 99.2 1.7E-10 3.6E-15 94.1 12.1 101 25-129 1-105 (229)
79 KOG2931 Differentiation-relate 99.2 7.8E-10 1.7E-14 91.0 14.8 124 5-129 23-158 (326)
80 PF03096 Ndr: Ndr family; Int 99.2 6.1E-10 1.3E-14 92.4 13.6 122 7-129 2-135 (283)
81 PLN02733 phosphatidylcholine-s 99.1 3.5E-10 7.5E-15 100.5 10.6 95 35-130 105-203 (440)
82 KOG4391 Predicted alpha/beta h 99.1 2.3E-10 5.1E-15 90.2 7.5 118 4-126 52-182 (300)
83 PRK10162 acetyl esterase; Prov 99.1 2.2E-09 4.8E-14 92.2 12.6 100 24-128 81-195 (318)
84 PF06500 DUF1100: Alpha/beta h 99.1 1.6E-09 3.6E-14 94.3 11.8 102 25-128 191-296 (411)
85 COG0429 Predicted hydrolase of 99.1 1.1E-09 2.4E-14 91.9 10.2 104 24-129 75-186 (345)
86 KOG1552 Predicted alpha/beta h 99.1 3.1E-09 6.8E-14 86.3 11.9 96 24-126 60-161 (258)
87 KOG1838 Alpha/beta hydrolase [ 99.0 1.4E-08 3.1E-13 88.0 15.8 105 23-129 124-236 (409)
88 KOG4667 Predicted esterase [Li 99.0 4.9E-09 1.1E-13 82.8 11.1 108 20-130 29-141 (269)
89 PRK10252 entF enterobactin syn 99.0 2.5E-09 5.5E-14 107.4 12.1 101 21-126 1065-1169(1296)
90 PF12740 Chlorophyllase2: Chlo 99.0 2.7E-09 5.9E-14 87.7 9.4 105 22-128 15-131 (259)
91 PF01674 Lipase_2: Lipase (cla 99.0 1.7E-09 3.8E-14 87.4 7.9 102 25-127 2-122 (219)
92 PF10230 DUF2305: Uncharacteri 99.0 1.4E-08 3.1E-13 85.0 13.1 105 24-128 2-122 (266)
93 PF01738 DLH: Dienelactone hyd 98.9 4.1E-09 8.9E-14 85.5 8.5 102 23-126 13-130 (218)
94 PF02230 Abhydrolase_2: Phosph 98.9 5.8E-09 1.3E-13 84.6 8.8 108 23-130 13-142 (216)
95 TIGR01839 PHA_synth_II poly(R) 98.9 6E-09 1.3E-13 94.1 9.3 102 24-130 215-330 (560)
96 COG3319 Thioesterase domains o 98.9 3.3E-08 7.1E-13 81.7 11.8 100 25-129 1-104 (257)
97 COG1506 DAP2 Dipeptidyl aminop 98.9 3.2E-08 6.9E-13 92.4 12.7 119 6-126 367-505 (620)
98 PF06028 DUF915: Alpha/beta hy 98.9 3.2E-08 6.9E-13 81.9 11.3 108 24-131 11-146 (255)
99 COG0412 Dienelactone hydrolase 98.9 4.5E-08 9.7E-13 80.5 12.0 102 25-127 28-145 (236)
100 PF10503 Esterase_phd: Esteras 98.8 5.6E-08 1.2E-12 78.7 12.0 105 24-128 16-132 (220)
101 PF07224 Chlorophyllase: Chlor 98.8 1.3E-08 2.8E-13 82.8 7.7 102 23-127 45-156 (307)
102 PF02129 Peptidase_S15: X-Pro 98.8 4.8E-08 1E-12 82.0 10.7 102 25-129 21-137 (272)
103 PF00326 Peptidase_S9: Prolyl 98.8 1.5E-08 3.4E-13 81.8 7.2 91 40-130 3-101 (213)
104 KOG2624 Triglyceride lipase-ch 98.8 3.7E-08 8.1E-13 86.2 9.4 125 6-130 51-201 (403)
105 COG3571 Predicted hydrolase of 98.7 2.2E-07 4.8E-12 70.2 11.5 107 26-133 16-129 (213)
106 COG0400 Predicted esterase [Ge 98.7 4.1E-08 8.9E-13 78.7 8.1 106 24-130 18-136 (207)
107 PF05448 AXE1: Acetyl xylan es 98.7 2.1E-07 4.5E-12 79.9 12.8 99 25-125 84-206 (320)
108 PF00151 Lipase: Lipase; Inte 98.7 1E-08 2.2E-13 88.3 4.4 105 23-129 70-188 (331)
109 PF06821 Ser_hydrolase: Serine 98.7 1.1E-07 2.3E-12 74.4 9.6 89 27-129 1-92 (171)
110 PF12715 Abhydrolase_7: Abhydr 98.7 1.8E-07 3.9E-12 80.6 10.4 102 24-126 115-258 (390)
111 COG3208 GrsT Predicted thioest 98.7 7.9E-08 1.7E-12 77.7 7.7 102 23-127 6-111 (244)
112 PF05728 UPF0227: Uncharacteri 98.7 3.1E-07 6.8E-12 72.6 11.0 87 27-129 2-92 (187)
113 COG1075 LipA Predicted acetylt 98.7 1.1E-07 2.5E-12 82.2 8.7 102 25-130 60-166 (336)
114 PF05057 DUF676: Putative seri 98.6 1.2E-07 2.5E-12 77.1 7.9 103 25-130 5-127 (217)
115 COG3458 Acetyl esterase (deace 98.6 4.5E-08 9.8E-13 79.9 5.2 116 12-130 65-211 (321)
116 PF02273 Acyl_transf_2: Acyl t 98.6 1.9E-06 4.1E-11 69.6 13.5 114 8-125 6-131 (294)
117 PF03403 PAF-AH_p_II: Platelet 98.6 1E-07 2.3E-12 83.6 6.6 106 24-130 100-264 (379)
118 PRK10115 protease 2; Provision 98.6 3.7E-07 7.9E-12 86.1 10.3 117 11-127 424-558 (686)
119 COG3509 LpqC Poly(3-hydroxybut 98.6 9.3E-07 2E-11 73.3 11.0 122 7-128 38-179 (312)
120 COG2945 Predicted hydrolase of 98.6 1E-06 2.2E-11 68.6 10.5 99 24-127 28-136 (210)
121 PF07859 Abhydrolase_3: alpha/ 98.5 2.9E-07 6.2E-12 74.0 7.5 93 27-128 1-110 (211)
122 TIGR01849 PHB_depoly_PhaZ poly 98.5 1.8E-06 4E-11 75.9 12.1 103 25-131 103-211 (406)
123 PF05990 DUF900: Alpha/beta hy 98.5 1E-06 2.2E-11 72.4 9.6 105 23-128 17-137 (233)
124 PTZ00472 serine carboxypeptida 98.4 4.2E-06 9.2E-11 75.4 12.9 122 7-128 50-216 (462)
125 PF05677 DUF818: Chlamydia CHL 98.4 8.1E-06 1.7E-10 69.2 13.6 105 5-114 113-236 (365)
126 KOG1553 Predicted alpha/beta h 98.4 2.3E-06 4.9E-11 72.3 9.4 96 25-125 244-342 (517)
127 smart00824 PKS_TE Thioesterase 98.4 5.1E-06 1.1E-10 65.9 11.1 90 34-128 9-102 (212)
128 PF06057 VirJ: Bacterial virul 98.4 3.2E-06 7E-11 66.2 9.2 97 25-128 3-107 (192)
129 COG4814 Uncharacterized protei 98.3 5.3E-06 1.1E-10 67.3 10.3 105 25-129 46-177 (288)
130 COG4188 Predicted dienelactone 98.3 2.6E-06 5.5E-11 73.0 7.4 92 24-115 71-181 (365)
131 COG0657 Aes Esterase/lipase [L 98.3 9.6E-06 2.1E-10 69.4 11.1 100 24-128 79-191 (312)
132 PRK05371 x-prolyl-dipeptidyl a 98.3 7E-06 1.5E-10 78.2 11.0 83 42-127 270-372 (767)
133 COG3243 PhaC Poly(3-hydroxyalk 98.2 1.9E-06 4.1E-11 74.8 6.0 106 24-129 107-218 (445)
134 COG4757 Predicted alpha/beta h 98.2 4E-06 8.6E-11 67.2 6.3 112 11-124 13-134 (281)
135 PF08538 DUF1749: Protein of u 98.2 5.2E-05 1.1E-09 63.9 12.9 110 13-131 20-151 (303)
136 COG3545 Predicted esterase of 98.2 2.7E-05 6E-10 59.9 10.0 92 25-129 3-95 (181)
137 PF00756 Esterase: Putative es 98.1 4.7E-06 1E-10 68.9 6.2 51 78-128 97-150 (251)
138 PRK10439 enterobactin/ferric e 98.1 3E-05 6.5E-10 68.9 11.1 104 24-128 209-323 (411)
139 PF02450 LCAT: Lecithin:choles 98.1 3.6E-05 7.7E-10 68.0 11.3 82 39-130 66-162 (389)
140 PRK04940 hypothetical protein; 98.1 2.9E-05 6.3E-10 60.6 9.0 89 27-130 2-94 (180)
141 COG4099 Predicted peptidase [G 98.1 1.8E-05 3.9E-10 65.8 8.0 101 25-128 192-304 (387)
142 PLN02606 palmitoyl-protein thi 98.1 2.7E-05 5.9E-10 65.4 9.1 102 23-130 25-134 (306)
143 KOG3724 Negative regulator of 98.1 4.4E-05 9.5E-10 70.8 11.1 102 24-130 89-222 (973)
144 COG2936 Predicted acyl esteras 98.0 3E-05 6.5E-10 70.3 9.2 118 12-129 28-160 (563)
145 KOG3975 Uncharacterized conser 98.0 0.0003 6.5E-09 57.2 13.4 122 5-126 2-145 (301)
146 KOG4627 Kynurenine formamidase 98.0 2.3E-05 4.9E-10 61.9 6.5 103 23-129 66-173 (270)
147 KOG2281 Dipeptidyl aminopeptid 98.0 2.1E-05 4.7E-10 71.3 7.0 99 25-123 643-757 (867)
148 PF03959 FSH1: Serine hydrolas 97.9 5.1E-05 1.1E-09 61.4 8.4 106 23-129 3-146 (212)
149 KOG2100 Dipeptidyl aminopeptid 97.9 0.0002 4.2E-09 68.4 12.9 123 4-128 498-644 (755)
150 KOG1515 Arylacetamide deacetyl 97.9 0.00023 4.9E-09 61.4 11.9 114 12-130 72-209 (336)
151 KOG2541 Palmitoyl protein thio 97.9 0.00015 3.3E-09 59.4 10.1 96 25-130 24-130 (296)
152 PF05577 Peptidase_S28: Serine 97.9 0.00014 3E-09 65.3 10.8 106 25-130 29-150 (434)
153 PF12048 DUF3530: Protein of u 97.8 0.002 4.2E-08 55.3 16.9 124 6-129 64-230 (310)
154 PLN02633 palmitoyl protein thi 97.8 0.00024 5.1E-09 60.0 10.9 102 23-130 24-133 (314)
155 cd00312 Esterase_lipase Estera 97.8 7.3E-05 1.6E-09 68.1 8.1 104 24-129 95-214 (493)
156 COG4782 Uncharacterized protei 97.8 0.00015 3.3E-09 62.0 8.9 103 24-126 116-232 (377)
157 KOG2112 Lysophospholipase [Lip 97.7 0.00015 3.3E-09 57.4 7.6 100 25-126 4-126 (206)
158 PF09752 DUF2048: Uncharacteri 97.7 0.00025 5.5E-09 60.7 9.5 103 24-127 92-209 (348)
159 PF06441 EHN: Epoxide hydrolas 97.7 9.5E-05 2.1E-09 53.4 5.6 43 2-44 66-112 (112)
160 KOG3847 Phospholipase A2 (plat 97.7 5.5E-05 1.2E-09 63.3 4.4 39 25-63 119-157 (399)
161 PF02089 Palm_thioest: Palmito 97.7 6.2E-05 1.4E-09 62.7 4.8 105 24-130 5-118 (279)
162 COG0627 Predicted esterase [Ge 97.6 0.00028 6.2E-09 60.3 8.1 107 25-131 55-190 (316)
163 KOG3043 Predicted hydrolase re 97.6 0.00014 3E-09 58.2 5.7 115 9-125 23-151 (242)
164 PF03583 LIP: Secretory lipase 97.6 0.00024 5.1E-09 60.3 7.1 83 43-128 18-113 (290)
165 PLN02517 phosphatidylcholine-s 97.5 0.00033 7.1E-09 63.9 7.3 91 38-130 156-265 (642)
166 COG3150 Predicted esterase [Ge 97.5 0.0006 1.3E-08 52.2 7.2 87 27-127 2-90 (191)
167 cd00741 Lipase Lipase. Lipase 97.4 0.00045 9.9E-09 52.7 6.4 51 79-129 10-68 (153)
168 PF00450 Peptidase_S10: Serine 97.4 0.005 1.1E-07 54.6 13.1 121 7-128 14-181 (415)
169 KOG2369 Lecithin:cholesterol a 97.2 0.00027 5.9E-09 62.4 3.7 89 38-129 124-226 (473)
170 KOG3967 Uncharacterized conser 97.2 0.0043 9.3E-08 49.5 9.8 105 24-128 101-227 (297)
171 PF01764 Lipase_3: Lipase (cla 97.2 0.00081 1.8E-08 50.2 5.7 36 78-113 49-84 (140)
172 PF00135 COesterase: Carboxyle 97.2 0.0013 2.9E-08 60.1 7.9 105 25-129 126-246 (535)
173 COG2272 PnbA Carboxylesterase 97.1 0.0022 4.9E-08 57.2 8.2 105 24-129 94-218 (491)
174 PF10340 DUF2424: Protein of u 97.0 0.012 2.5E-07 51.4 10.9 102 24-128 122-235 (374)
175 COG3946 VirJ Type IV secretory 96.8 0.0059 1.3E-07 53.2 7.7 83 26-115 262-348 (456)
176 PF11187 DUF2974: Protein of u 96.8 0.026 5.6E-07 46.0 11.2 50 80-130 72-125 (224)
177 KOG4840 Predicted hydrolases o 96.7 0.0034 7.4E-08 50.4 5.3 96 24-128 36-144 (299)
178 PF06259 Abhydrolase_8: Alpha/ 96.7 0.037 8E-07 43.3 11.0 54 76-129 87-145 (177)
179 KOG2183 Prolylcarboxypeptidase 96.6 0.011 2.4E-07 51.6 8.3 104 25-128 81-202 (492)
180 KOG3101 Esterase D [General fu 96.6 0.0029 6.3E-08 50.4 4.1 102 25-126 45-174 (283)
181 cd00519 Lipase_3 Lipase (class 96.6 0.0055 1.2E-07 50.0 5.9 23 91-113 126-148 (229)
182 PF07082 DUF1350: Protein of u 96.5 0.027 5.8E-07 46.2 9.3 78 38-126 34-123 (250)
183 PF11339 DUF3141: Protein of u 96.4 0.046 1E-06 49.3 10.8 79 43-129 93-176 (581)
184 PLN02162 triacylglycerol lipas 96.4 0.0099 2.1E-07 53.0 6.4 51 78-128 263-321 (475)
185 PLN00413 triacylglycerol lipas 96.3 0.013 2.8E-07 52.4 6.6 51 78-128 269-327 (479)
186 PF08840 BAAT_C: BAAT / Acyl-C 96.2 0.015 3.3E-07 47.0 6.3 35 93-128 22-56 (213)
187 COG2382 Fes Enterochelin ester 96.0 0.022 4.7E-07 47.9 6.3 35 94-128 178-212 (299)
188 PLN02454 triacylglycerol lipas 95.9 0.023 5E-07 50.1 6.4 35 79-113 212-248 (414)
189 KOG2551 Phospholipase/carboxyh 95.9 0.093 2E-06 42.3 9.1 102 24-128 5-147 (230)
190 PLN03016 sinapoylglucose-malat 95.7 0.14 3E-06 46.0 10.7 121 7-127 40-209 (433)
191 PF01083 Cutinase: Cutinase; 95.7 0.032 6.9E-07 43.9 5.9 51 79-129 67-123 (179)
192 KOG2182 Hydrolytic enzymes of 95.6 0.16 3.5E-06 45.6 10.7 107 23-129 85-208 (514)
193 COG2819 Predicted hydrolase of 95.6 0.022 4.7E-07 47.2 4.9 47 81-127 122-171 (264)
194 PLN02209 serine carboxypeptida 95.6 0.21 4.4E-06 45.0 11.3 121 7-127 42-211 (437)
195 PLN02310 triacylglycerol lipas 95.5 0.042 9E-07 48.5 6.7 52 77-128 189-248 (405)
196 PLN02408 phospholipase A1 95.5 0.021 4.6E-07 49.7 4.8 36 78-113 183-220 (365)
197 PLN02571 triacylglycerol lipas 95.5 0.023 4.9E-07 50.2 4.9 37 77-113 208-246 (413)
198 PF11144 DUF2920: Protein of u 95.4 0.22 4.7E-06 43.9 10.5 34 94-127 185-218 (403)
199 KOG4372 Predicted alpha/beta h 95.4 0.025 5.5E-07 49.4 4.7 87 24-111 80-168 (405)
200 PLN02934 triacylglycerol lipas 95.3 0.052 1.1E-06 49.1 6.7 35 78-112 306-340 (515)
201 KOG2237 Predicted serine prote 95.2 0.013 2.8E-07 53.8 2.6 101 23-123 469-579 (712)
202 PF04301 DUF452: Protein of un 95.2 0.13 2.9E-06 41.4 8.0 79 24-128 11-90 (213)
203 KOG1282 Serine carboxypeptidas 95.2 0.2 4.3E-06 45.1 9.8 120 7-127 47-212 (454)
204 PF05277 DUF726: Protein of un 95.1 0.077 1.7E-06 46.0 7.0 40 91-130 218-262 (345)
205 KOG1516 Carboxylesterase and r 95.1 0.095 2E-06 48.4 8.0 105 24-128 112-232 (545)
206 PLN02324 triacylglycerol lipas 95.0 0.068 1.5E-06 47.2 6.2 36 78-113 198-235 (415)
207 PF05576 Peptidase_S37: PS-10 94.9 0.054 1.2E-06 47.6 5.4 104 23-128 62-169 (448)
208 PF04083 Abhydro_lipase: Parti 94.8 0.072 1.6E-06 34.2 4.5 35 6-40 14-59 (63)
209 COG2939 Carboxypeptidase C (ca 94.7 0.12 2.6E-06 46.6 7.1 104 24-127 101-235 (498)
210 PLN03037 lipase class 3 family 94.6 0.054 1.2E-06 49.1 4.6 37 77-113 298-338 (525)
211 COG1770 PtrB Protease II [Amin 94.5 0.077 1.7E-06 49.2 5.6 103 22-124 446-558 (682)
212 PF11288 DUF3089: Protein of u 94.5 0.091 2E-06 42.2 5.3 69 45-114 40-116 (207)
213 PLN02802 triacylglycerol lipas 94.3 0.08 1.7E-06 47.9 5.0 36 78-113 313-350 (509)
214 PLN02753 triacylglycerol lipas 94.1 0.09 2E-06 47.7 5.1 37 77-113 291-332 (531)
215 PLN02719 triacylglycerol lipas 93.8 0.11 2.4E-06 47.0 5.0 36 78-113 278-318 (518)
216 PLN02761 lipase class 3 family 93.7 0.12 2.5E-06 47.0 5.0 36 77-112 272-313 (527)
217 COG4947 Uncharacterized protei 93.6 0.15 3.4E-06 39.4 4.8 115 14-130 15-138 (227)
218 COG1505 Serine proteases of th 93.4 0.068 1.5E-06 49.0 3.1 118 6-123 396-530 (648)
219 KOG3253 Predicted alpha/beta h 92.9 0.081 1.7E-06 48.6 2.8 97 24-129 176-287 (784)
220 KOG4569 Predicted lipase [Lipi 92.7 0.21 4.5E-06 43.3 4.9 51 77-127 155-211 (336)
221 PLN02847 triacylglycerol lipas 92.1 0.29 6.2E-06 45.2 5.2 21 93-113 251-271 (633)
222 KOG2029 Uncharacterized conser 92.1 0.75 1.6E-05 42.4 7.8 38 93-130 526-574 (697)
223 PF05705 DUF829: Eukaryotic pr 91.9 1.9 4.2E-05 35.2 9.6 100 26-130 1-114 (240)
224 PLN02213 sinapoylglucose-malat 91.2 0.98 2.1E-05 38.9 7.4 75 53-127 3-95 (319)
225 PF08237 PE-PPE: PE-PPE domain 91.1 2.2 4.7E-05 34.9 8.9 79 51-129 2-90 (225)
226 KOG1202 Animal-type fatty acid 90.7 1.3 2.9E-05 44.3 8.2 94 23-127 2122-2218(2376)
227 TIGR03712 acc_sec_asp2 accesso 90.4 1.6 3.4E-05 39.5 8.0 93 16-114 279-378 (511)
228 PF07519 Tannase: Tannase and 89.2 2.1 4.6E-05 39.0 8.2 81 44-127 53-149 (474)
229 PF09949 DUF2183: Uncharacteri 89.1 6.2 0.00013 27.8 9.7 86 37-123 10-97 (100)
230 KOG1283 Serine carboxypeptidas 83.9 3.7 8E-05 35.3 6.1 88 24-113 31-142 (414)
231 KOG1551 Uncharacterized conser 82.4 1.5 3.3E-05 36.5 3.3 97 27-125 116-227 (371)
232 KOG4540 Putative lipase essent 81.8 3.5 7.5E-05 34.8 5.1 26 90-115 273-298 (425)
233 COG5153 CVT17 Putative lipase 81.8 3.5 7.5E-05 34.8 5.1 26 90-115 273-298 (425)
234 KOG2385 Uncharacterized conser 80.7 2.6 5.5E-05 38.4 4.3 41 90-130 444-489 (633)
235 cd01714 ETF_beta The electron 73.2 23 0.00049 28.3 7.6 51 73-124 90-145 (202)
236 KOG4388 Hormone-sensitive lipa 72.2 11 0.00024 35.1 6.0 97 26-127 398-507 (880)
237 PF06309 Torsin: Torsin; Inte 71.3 6.5 0.00014 29.0 3.6 29 23-51 51-81 (127)
238 PF00698 Acyl_transf_1: Acyl t 69.3 3.9 8.5E-05 35.0 2.5 29 83-111 74-102 (318)
239 smart00827 PKS_AT Acyl transfe 67.2 7 0.00015 32.9 3.6 30 83-112 72-101 (298)
240 PF09994 DUF2235: Uncharacteri 64.6 54 0.0012 27.5 8.5 30 85-114 83-113 (277)
241 PRK12467 peptide synthase; Pro 64.6 60 0.0013 37.9 10.9 96 25-125 3693-3792(3956)
242 TIGR03131 malonate_mdcH malona 63.5 9.2 0.0002 32.3 3.6 30 83-112 66-95 (295)
243 COG2830 Uncharacterized protei 63.2 33 0.00071 26.6 6.0 79 25-129 12-91 (214)
244 PF03610 EIIA-man: PTS system 62.1 55 0.0012 23.3 7.7 71 26-110 2-74 (116)
245 TIGR02764 spore_ybaN_pdaB poly 62.0 7.6 0.00016 30.5 2.7 33 26-58 153-188 (191)
246 COG4553 DepA Poly-beta-hydroxy 61.9 1E+02 0.0022 26.4 10.1 102 25-130 104-211 (415)
247 TIGR00128 fabD malonyl CoA-acy 60.7 10 0.00022 31.7 3.4 29 84-112 73-102 (290)
248 cd00006 PTS_IIA_man PTS_IIA, P 56.2 73 0.0016 22.9 7.3 70 26-109 3-74 (122)
249 TIGR02884 spore_pdaA delta-lac 56.0 15 0.00033 29.8 3.5 34 25-58 187-221 (224)
250 PF06792 UPF0261: Uncharacteri 55.4 1.6E+02 0.0034 26.4 10.7 94 30-123 6-125 (403)
251 COG1752 RssA Predicted esteras 54.4 18 0.00039 30.9 3.9 34 82-115 28-61 (306)
252 KOG2521 Uncharacterized conser 54.1 75 0.0016 27.8 7.6 104 25-129 39-153 (350)
253 TIGR02873 spore_ylxY probable 54.1 17 0.00037 30.5 3.6 34 25-58 231-264 (268)
254 cd07198 Patatin Patatin-like p 53.8 22 0.00048 27.3 4.0 33 83-115 16-48 (172)
255 PF10142 PhoPQ_related: PhoPQ- 53.7 34 0.00074 30.1 5.5 44 84-128 160-206 (367)
256 TIGR03586 PseI pseudaminic aci 53.4 1.5E+02 0.0033 25.7 9.8 93 23-125 133-226 (327)
257 TIGR00521 coaBC_dfp phosphopan 53.1 1.6E+02 0.0034 26.3 9.6 87 25-114 113-225 (390)
258 cd03818 GT1_ExpC_like This fam 51.0 31 0.00067 30.2 5.0 35 27-64 2-37 (396)
259 PRK10279 hypothetical protein; 50.7 22 0.00048 30.4 3.8 33 83-115 23-55 (300)
260 cd07225 Pat_PNPLA6_PNPLA7 Pata 49.6 25 0.00055 30.1 4.0 33 82-114 32-64 (306)
261 COG3933 Transcriptional antite 49.5 1.4E+02 0.003 27.1 8.5 73 25-110 110-182 (470)
262 TIGR02816 pfaB_fam PfaB family 49.4 19 0.00042 33.4 3.5 32 83-114 254-286 (538)
263 TIGR03569 NeuB_NnaB N-acetylne 46.1 1.9E+02 0.004 25.2 8.8 93 23-125 132-227 (329)
264 COG0529 CysC Adenylylsulfate k 45.1 61 0.0013 25.6 5.1 38 22-59 20-59 (197)
265 cd07207 Pat_ExoU_VipD_like Exo 44.8 35 0.00077 26.5 4.0 33 83-115 17-49 (194)
266 COG0541 Ffh Signal recognition 44.8 1.3E+02 0.0028 27.2 7.7 70 45-124 176-247 (451)
267 PF00448 SRP54: SRP54-type pro 44.8 1.3E+02 0.0029 23.7 7.3 74 41-124 73-148 (196)
268 cd07210 Pat_hypo_W_succinogene 44.3 40 0.00086 27.3 4.2 33 83-115 18-50 (221)
269 cd07227 Pat_Fungal_NTE1 Fungal 43.3 37 0.0008 28.5 4.0 31 83-113 28-58 (269)
270 PRK05579 bifunctional phosphop 43.2 2.4E+02 0.0053 25.2 10.0 73 24-100 116-196 (399)
271 COG3727 Vsr DNA G:T-mismatch r 42.1 1E+02 0.0022 23.0 5.5 14 44-57 101-114 (150)
272 PF11713 Peptidase_C80: Peptid 40.5 17 0.00036 27.9 1.4 46 60-105 62-116 (157)
273 PF10081 Abhydrolase_9: Alpha/ 39.7 69 0.0015 27.2 5.0 52 78-129 91-148 (289)
274 cd07209 Pat_hypo_Ecoli_Z1214_l 39.6 44 0.00096 26.8 3.9 33 83-115 16-48 (215)
275 cd07228 Pat_NTE_like_bacteria 39.1 51 0.0011 25.4 4.0 32 84-115 19-50 (175)
276 COG3887 Predicted signaling pr 38.8 53 0.0011 30.8 4.5 100 24-126 258-376 (655)
277 PF03283 PAE: Pectinacetyleste 38.6 1.4E+02 0.0031 26.2 7.1 36 92-127 155-194 (361)
278 PRK02399 hypothetical protein; 38.4 3E+02 0.0064 24.7 11.2 96 28-123 6-127 (406)
279 PF09419 PGP_phosphatase: Mito 37.8 1.5E+02 0.0032 23.0 6.3 54 46-103 35-88 (168)
280 COG1448 TyrB Aspartate/tyrosin 37.7 2.5E+02 0.0055 25.0 8.2 85 25-126 172-263 (396)
281 TIGR03709 PPK2_rel_1 polyphosp 37.0 45 0.00098 27.9 3.5 37 24-60 55-93 (264)
282 COG1576 Uncharacterized conser 36.6 1.1E+02 0.0023 23.5 5.1 48 51-109 67-114 (155)
283 PRK14974 cell division protein 35.8 3E+02 0.0064 24.0 8.9 68 47-124 218-287 (336)
284 KOG1200 Mitochondrial/plastidi 35.7 2.2E+02 0.0048 23.1 6.9 33 26-60 15-47 (256)
285 PHA02114 hypothetical protein 35.3 60 0.0013 22.8 3.3 33 25-57 83-115 (127)
286 PF08433 KTI12: Chromatin asso 35.0 96 0.0021 26.0 5.3 38 26-63 2-41 (270)
287 COG3340 PepE Peptidase E [Amin 34.8 1.9E+02 0.0042 23.5 6.5 37 23-59 31-70 (224)
288 TIGR01425 SRP54_euk signal rec 34.3 2.3E+02 0.0051 25.6 7.8 70 45-124 176-247 (429)
289 KOG2170 ATPase of the AAA+ sup 34.1 54 0.0012 28.2 3.5 29 23-51 108-138 (344)
290 PRK11613 folP dihydropteroate 33.8 2.9E+02 0.0064 23.4 8.3 74 24-106 133-224 (282)
291 PF01583 APS_kinase: Adenylyls 33.5 86 0.0019 24.0 4.3 36 24-59 1-38 (156)
292 TIGR03707 PPK2_P_aer polyphosp 33.4 50 0.0011 27.0 3.2 69 24-106 30-102 (230)
293 PF03205 MobB: Molybdopterin g 33.3 70 0.0015 23.8 3.8 41 26-66 1-43 (140)
294 cd07230 Pat_TGL4-5_like Triacy 33.0 40 0.00086 30.3 2.8 38 83-120 91-128 (421)
295 cd07224 Pat_like Patatin-like 32.8 70 0.0015 26.1 4.0 34 83-116 17-52 (233)
296 COG3946 VirJ Type IV secretory 31.9 1.8E+02 0.0039 26.2 6.4 100 26-125 50-154 (456)
297 COG0218 Predicted GTPase [Gene 31.2 75 0.0016 25.4 3.8 16 54-69 72-87 (200)
298 cd07208 Pat_hypo_Ecoli_yjju_li 31.0 77 0.0017 26.2 4.1 35 83-117 16-51 (266)
299 cd07205 Pat_PNPLA6_PNPLA7_NTE1 30.7 96 0.0021 23.7 4.4 31 84-114 19-49 (175)
300 PRK09936 hypothetical protein; 30.4 1.5E+02 0.0032 25.3 5.5 50 37-92 37-86 (296)
301 PRK14581 hmsF outer membrane N 29.9 62 0.0013 31.0 3.6 78 23-100 47-142 (672)
302 cd07229 Pat_TGL3_like Triacylg 29.4 53 0.0012 29.2 2.9 39 83-121 101-139 (391)
303 KOG1209 1-Acyl dihydroxyaceton 28.6 1E+02 0.0022 25.3 4.1 37 22-59 4-40 (289)
304 PF04244 DPRP: Deoxyribodipyri 28.3 1.7E+02 0.0036 23.9 5.4 50 38-98 49-98 (224)
305 PF13207 AAA_17: AAA domain; P 28.1 59 0.0013 22.8 2.6 31 27-59 1-32 (121)
306 cd07231 Pat_SDP1-like Sugar-De 28.0 51 0.0011 28.5 2.5 32 83-114 86-117 (323)
307 PF14488 DUF4434: Domain of un 28.0 1.9E+02 0.0041 22.2 5.5 57 37-93 19-80 (166)
308 cd07232 Pat_PLPL Patain-like p 28.0 52 0.0011 29.5 2.6 39 83-121 85-123 (407)
309 COG4088 Predicted nucleotide k 27.8 1.5E+02 0.0032 24.3 4.8 34 26-59 2-37 (261)
310 cd06292 PBP1_LacI_like_10 Liga 27.5 3.3E+02 0.0071 21.9 8.0 75 26-102 58-132 (273)
311 COG0159 TrpA Tryptophan syntha 27.2 2.8E+02 0.0061 23.3 6.6 72 25-112 96-168 (265)
312 COG1073 Hydrolases of the alph 27.1 77 0.0017 25.7 3.5 90 24-115 49-154 (299)
313 cd07204 Pat_PNPLA_like Patatin 26.8 1.1E+02 0.0023 25.1 4.2 20 96-115 34-53 (243)
314 PRK06029 3-octaprenyl-4-hydrox 26.5 3.2E+02 0.007 21.5 7.3 45 41-93 132-177 (185)
315 PF03976 PPK2: Polyphosphate k 26.3 29 0.00063 28.4 0.7 37 24-60 30-68 (228)
316 PF14253 AbiH: Bacteriophage a 26.2 75 0.0016 26.2 3.2 16 91-106 233-248 (270)
317 PRK15180 Vi polysaccharide bio 25.7 2.3E+02 0.0049 26.3 6.1 79 24-102 96-198 (831)
318 COG0331 FabD (acyl-carrier-pro 25.1 90 0.002 26.8 3.5 22 91-112 83-104 (310)
319 cd07206 Pat_TGL3-4-5_SDP1 Tria 25.0 86 0.0019 26.8 3.3 29 87-115 91-119 (298)
320 PF05724 TPMT: Thiopurine S-me 24.9 88 0.0019 25.3 3.3 30 25-59 38-67 (218)
321 PF13383 Methyltransf_22: Meth 24.5 1.3E+02 0.0029 24.8 4.3 36 24-59 192-227 (242)
322 PRK13256 thiopurine S-methyltr 24.2 1E+02 0.0022 25.2 3.4 28 27-59 46-73 (226)
323 KOG0780 Signal recognition par 24.1 5.2E+02 0.011 23.3 7.8 70 45-124 177-248 (483)
324 COG3673 Uncharacterized conser 24.0 5E+02 0.011 22.8 9.0 90 24-113 31-142 (423)
325 COG1506 DAP2 Dipeptidyl aminop 24.0 3.2E+02 0.0069 25.9 7.2 42 24-65 551-597 (620)
326 TIGR01626 ytfJ_HI0045 conserve 23.8 1.6E+02 0.0035 23.2 4.4 90 9-111 40-142 (184)
327 PRK14582 pgaB outer membrane N 23.7 85 0.0019 30.1 3.3 77 23-99 47-141 (671)
328 TIGR01361 DAHP_synth_Bsub phos 23.5 4.3E+02 0.0094 21.9 11.1 73 23-103 131-206 (260)
329 COG2185 Sbm Methylmalonyl-CoA 23.5 3.3E+02 0.0071 20.6 6.9 38 22-59 10-48 (143)
330 PF02590 SPOUT_MTase: Predicte 23.5 1.7E+02 0.0036 22.3 4.4 44 50-104 66-110 (155)
331 PRK06696 uridine kinase; Valid 23.2 2.1E+02 0.0046 22.8 5.3 40 23-62 20-61 (223)
332 PF03490 Varsurf_PPLC: Variant 22.8 98 0.0021 18.7 2.3 27 73-99 5-31 (51)
333 COG0279 GmhA Phosphoheptose is 22.4 1.7E+02 0.0036 22.8 4.1 74 28-105 44-121 (176)
334 cd07218 Pat_iPLA2 Calcium-inde 22.4 1.4E+02 0.003 24.6 4.1 20 96-115 33-52 (245)
335 PF08902 DUF1848: Domain of un 22.4 4.7E+02 0.01 22.0 7.2 66 25-96 49-115 (266)
336 PF08484 Methyltransf_14: C-me 22.3 2.9E+02 0.0063 21.1 5.5 49 77-125 51-101 (160)
337 TIGR00959 ffh signal recogniti 22.3 5.9E+02 0.013 23.0 8.5 71 44-124 175-247 (428)
338 PF12242 Eno-Rase_NADH_b: NAD( 22.1 1.9E+02 0.0041 19.3 3.8 25 91-115 38-62 (78)
339 cd07221 Pat_PNPLA3 Patatin-lik 22.0 1.5E+02 0.0032 24.6 4.1 22 94-115 33-54 (252)
340 KOG2872 Uroporphyrinogen decar 21.9 4.1E+02 0.0088 22.8 6.5 69 25-100 253-335 (359)
341 cd07222 Pat_PNPLA4 Patatin-lik 21.2 1.3E+02 0.0029 24.7 3.7 35 83-118 17-55 (246)
342 TIGR00176 mobB molybdopterin-g 21.1 1.8E+02 0.004 21.9 4.2 37 27-63 1-39 (155)
343 cd07212 Pat_PNPLA9 Patatin-lik 21.0 1.9E+02 0.004 24.8 4.7 19 96-114 35-53 (312)
344 PF01656 CbiA: CobQ/CobB/MinD/ 20.8 1.4E+02 0.0031 22.7 3.7 34 28-61 2-37 (195)
345 KOG1411 Aspartate aminotransfe 20.5 74 0.0016 27.9 2.0 85 25-125 198-289 (427)
346 PRK01261 aroD 3-dehydroquinate 20.4 1.9E+02 0.0042 23.6 4.4 29 76-104 158-186 (229)
347 cd07220 Pat_PNPLA2 Patatin-lik 20.3 1.6E+02 0.0034 24.4 3.9 21 95-115 38-58 (249)
348 PF01580 FtsK_SpoIIIE: FtsK/Sp 20.2 3E+02 0.0065 21.4 5.5 38 27-64 40-83 (205)
No 1
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=100.00 E-value=1.1e-41 Score=282.18 Aligned_cols=227 Identities=53% Similarity=1.056 Sum_probs=201.9
Q ss_pred CCCceEEEEeCCEEEEEEeeC--CCCeEEEEcCCCCChhhHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHH
Q 025885 2 EKIEHTTVATNGINMHVASIG--TGPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHL 79 (247)
Q Consensus 2 ~~~~~~~~~~~g~~~~~~~~g--~~~~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~ 79 (247)
+.+++++++.+|+++||.+.| ++|.|+++||+|.++++|+.++..|+.+||+|+|+|+||||.|+.|.....|+...+
T Consensus 20 ~~~~hk~~~~~gI~~h~~e~g~~~gP~illlHGfPe~wyswr~q~~~la~~~~rviA~DlrGyG~Sd~P~~~~~Yt~~~l 99 (322)
T KOG4178|consen 20 SAISHKFVTYKGIRLHYVEGGPGDGPIVLLLHGFPESWYSWRHQIPGLASRGYRVIAPDLRGYGFSDAPPHISEYTIDEL 99 (322)
T ss_pred hhcceeeEEEccEEEEEEeecCCCCCEEEEEccCCccchhhhhhhhhhhhcceEEEecCCCCCCCCCCCCCcceeeHHHH
Confidence 468899999999999999988 579999999999999999999999999999999999999999999998789999999
Q ss_pred HHHHHHHHHHhCCceEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCCCCCCCCchhhHHHhcCchhhHHhhcCcch
Q 025885 80 VGDLIGLLDKLGIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFPPRNPAVRPLNNFRAVYGDDYYICRFQEPGE 159 (247)
Q Consensus 80 ~~~~~~~~~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (247)
+.|+..++++++.++++++|||||+++||.+|..+|++|+++|++++++. .+...+...+...+.+++|...||.|..
T Consensus 100 ~~di~~lld~Lg~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~--~p~~~~~~~~~~~f~~~~y~~~fQ~~~~ 177 (322)
T KOG4178|consen 100 VGDIVALLDHLGLKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFP--NPKLKPLDSSKAIFGKSYYICLFQEPGK 177 (322)
T ss_pred HHHHHHHHHHhccceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCC--CcccchhhhhccccCccceeEeccccCc
Confidence 99999999999999999999999999999999999999999999999886 4555666667777888999999999999
Q ss_pred HHHHHhccCHHHHHHHHHhccCCCCCCCCCCcCCCCCCCCCCCCCCCCHHHHHHHHHHHcccCCcchhhhhhcCCCCCC
Q 025885 160 IEEEFAQIDTARLMKKFLCLRIPKPLCIPKDTGLSTLPDPSALPSWLSEEDVNYYASKFNQKGFTGPVNYYRCWDLYVP 238 (247)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~Yr~~~~~~~ 238 (247)
+|..+...+.+.++..++....+.+...++ .+...+.|+++++++.|...|...|+++++||||++.++|+
T Consensus 178 ~E~~~s~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~w~t~edi~~~~~~f~~~g~~gplNyyrn~~r~w~ 248 (322)
T KOG4178|consen 178 PETELSKDDTEMLVKTFRTRKTPGPLIVPK--------QPNENPLWLTEEDIAFYVSKFQIDGFTGPLNYYRNFRRNWE 248 (322)
T ss_pred chhhhccchhHHhHHhhhccccCCccccCC--------CCCCccchhhHHHHHHHHhccccccccccchhhHHHhhCch
Confidence 999998888888888777766554443322 11223779999999999999988889999999999999996
No 2
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.93 E-value=7.7e-25 Score=185.70 Aligned_cols=121 Identities=36% Similarity=0.601 Sum_probs=113.1
Q ss_pred CceEEEEeCCEEEEEEeeCCCCeEEEEcCCCCChhhHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHH
Q 025885 4 IEHTTVATNGINMHVASIGTGPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDL 83 (247)
Q Consensus 4 ~~~~~~~~~g~~~~~~~~g~~~~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~ 83 (247)
++..+++++|.+++|.+.|++++|||+||++++...|+.+++.|.++ ++|+++|+||||.|+.+. ..++...+++|+
T Consensus 7 ~~~~~~~~~g~~i~y~~~G~g~~vvllHG~~~~~~~w~~~~~~L~~~-~~via~D~~G~G~S~~~~--~~~~~~~~a~dl 83 (295)
T PRK03592 7 GEMRRVEVLGSRMAYIETGEGDPIVFLHGNPTSSYLWRNIIPHLAGL-GRCLAPDLIGMGASDKPD--IDYTFADHARYL 83 (295)
T ss_pred CcceEEEECCEEEEEEEeCCCCEEEEECCCCCCHHHHHHHHHHHhhC-CEEEEEcCCCCCCCCCCC--CCCCHHHHHHHH
Confidence 45677889999999999999999999999999999999999999887 599999999999998875 468899999999
Q ss_pred HHHHHHhCCceEEEEEechhHHHHHHHHHhCCCceeEEEEecCC
Q 025885 84 IGLLDKLGIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVP 127 (247)
Q Consensus 84 ~~~~~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~ 127 (247)
.+++++++.++++++||||||.+++.+|.++|++|+++|+++++
T Consensus 84 ~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~ 127 (295)
T PRK03592 84 DAWFDALGLDDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAI 127 (295)
T ss_pred HHHHHHhCCCCeEEEEECHHHHHHHHHHHhChhheeEEEEECCC
Confidence 99999999999999999999999999999999999999999974
No 3
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.93 E-value=5.1e-25 Score=186.71 Aligned_cols=125 Identities=24% Similarity=0.397 Sum_probs=114.0
Q ss_pred CCceEEEEeCCEEEEEEeeC-CCCeEEEEcCCCCChhhHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCC-----CCCCCH
Q 025885 3 KIEHTTVATNGINMHVASIG-TGPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPS-----VTSYTA 76 (247)
Q Consensus 3 ~~~~~~~~~~g~~~~~~~~g-~~~~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~-----~~~~~~ 76 (247)
+.+.++++++|.+++|...| ++|+|||+||+++++..|+.+++.|.++ |+|+++|+||||.|+.+.. ...++.
T Consensus 7 ~~~~~~~~~~~~~i~y~~~G~~~~~vlllHG~~~~~~~w~~~~~~L~~~-~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~ 85 (294)
T PLN02824 7 QVETRTWRWKGYNIRYQRAGTSGPALVLVHGFGGNADHWRKNTPVLAKS-HRVYAIDLLGYGYSDKPNPRSAPPNSFYTF 85 (294)
T ss_pred CCCCceEEEcCeEEEEEEcCCCCCeEEEECCCCCChhHHHHHHHHHHhC-CeEEEEcCCCCCCCCCCccccccccccCCH
Confidence 46678999999999999998 4899999999999999999999999876 7999999999999987542 135889
Q ss_pred HHHHHHHHHHHHHhCCceEEEEEechhHHHHHHHHHhCCCceeEEEEecCCC
Q 025885 77 LHLVGDLIGLLDKLGIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPF 128 (247)
Q Consensus 77 ~~~~~~~~~~~~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~ 128 (247)
+++++|+.+++++++.++++||||||||.+++.+|.++|++|+++|+++++.
T Consensus 86 ~~~a~~l~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~ 137 (294)
T PLN02824 86 ETWGEQLNDFCSDVVGDPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISL 137 (294)
T ss_pred HHHHHHHHHHHHHhcCCCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCc
Confidence 9999999999999999999999999999999999999999999999998754
No 4
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.93 E-value=9.3e-25 Score=185.93 Aligned_cols=124 Identities=34% Similarity=0.572 Sum_probs=113.0
Q ss_pred CceEEEEeCC-----EEEEEEeeCC--CCeEEEEcCCCCChhhHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCCH
Q 025885 4 IEHTTVATNG-----INMHVASIGT--GPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTA 76 (247)
Q Consensus 4 ~~~~~~~~~g-----~~~~~~~~g~--~~~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~ 76 (247)
+..+++++++ .+++|.+.|+ +|+|||+||++++...|..+++.|.++||+|+++|+||||.|+.+.....++.
T Consensus 19 ~~~~~~~~~~~~~~~~~i~y~~~G~~~~~~lvliHG~~~~~~~w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~~~~~~~~ 98 (302)
T PRK00870 19 FAPHYVDVDDGDGGPLRMHYVDEGPADGPPVLLLHGEPSWSYLYRKMIPILAAAGHRVIAPDLIGFGRSDKPTRREDYTY 98 (302)
T ss_pred CCceeEeecCCCCceEEEEEEecCCCCCCEEEEECCCCCchhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCCcccCCH
Confidence 4567888888 8999999884 79999999999999999999999988899999999999999987654346889
Q ss_pred HHHHHHHHHHHHHhCCceEEEEEechhHHHHHHHHHhCCCceeEEEEecCC
Q 025885 77 LHLVGDLIGLLDKLGIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVP 127 (247)
Q Consensus 77 ~~~~~~~~~~~~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~ 127 (247)
+++++|+.+++++++.++++++||||||.++..+|.++|++|+++|++++.
T Consensus 99 ~~~a~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 149 (302)
T PRK00870 99 ARHVEWMRSWFEQLDLTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTG 149 (302)
T ss_pred HHHHHHHHHHHHHcCCCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCC
Confidence 999999999999999999999999999999999999999999999999864
No 5
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.91 E-value=8.7e-23 Score=178.03 Aligned_cols=120 Identities=27% Similarity=0.415 Sum_probs=108.0
Q ss_pred EEEEeCCE-EEEEEeeCCC------CeEEEEcCCCCChhhHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHH
Q 025885 7 TTVATNGI-NMHVASIGTG------PAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHL 79 (247)
Q Consensus 7 ~~~~~~g~-~~~~~~~g~~------~~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~ 79 (247)
++++.+|. +++|.+.|++ |+|||+||++++...|+.+++.|.+ +|+|+++|+||||.|+.+.. ..++.+++
T Consensus 64 ~~~~~~g~~~i~Y~~~G~g~~~~~gp~lvllHG~~~~~~~w~~~~~~L~~-~~~via~Dl~G~G~S~~~~~-~~~~~~~~ 141 (360)
T PLN02679 64 KKWKWKGEYSINYLVKGSPEVTSSGPPVLLVHGFGASIPHWRRNIGVLAK-NYTVYAIDLLGFGASDKPPG-FSYTMETW 141 (360)
T ss_pred ceEEECCceeEEEEEecCcccCCCCCeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCCCC-ccccHHHH
Confidence 56677787 9999998866 9999999999999999999999976 79999999999999987643 36889999
Q ss_pred HHHHHHHHHHhCCceEEEEEechhHHHHHHHHHh-CCCceeEEEEecCCC
Q 025885 80 VGDLIGLLDKLGIHQVFLVGHDWGALIAWYFCLF-RPDRVKALVNMSVPF 128 (247)
Q Consensus 80 ~~~~~~~~~~l~~~~~~lvGhS~Gg~~a~~~a~~-~p~~v~~lv~~~~~~ 128 (247)
++++.+++++++.++++||||||||.+++.++.. +|++|+++|+++++.
T Consensus 142 a~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~ 191 (360)
T PLN02679 142 AELILDFLEEVVQKPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAG 191 (360)
T ss_pred HHHHHHHHHHhcCCCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCcc
Confidence 9999999999999999999999999999998874 799999999998754
No 6
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.91 E-value=2.2e-23 Score=176.32 Aligned_cols=123 Identities=28% Similarity=0.514 Sum_probs=112.4
Q ss_pred CceEEEEeCCEEEEEEeeCCCCeEEEEcCCCCChhhHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHH
Q 025885 4 IEHTTVATNGINMHVASIGTGPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDL 83 (247)
Q Consensus 4 ~~~~~~~~~g~~~~~~~~g~~~~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~ 83 (247)
++.++++++|.++||...|++|+|||+||++.+...|+.+++.|.+ +|+|+++|+||||.|+.+.. ..++.+++++++
T Consensus 14 ~~~~~~~~~~~~i~y~~~G~~~~iv~lHG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~~~ 91 (286)
T PRK03204 14 FESRWFDSSRGRIHYIDEGTGPPILLCHGNPTWSFLYRDIIVALRD-RFRCVAPDYLGFGLSERPSG-FGYQIDEHARVI 91 (286)
T ss_pred ccceEEEcCCcEEEEEECCCCCEEEEECCCCccHHHHHHHHHHHhC-CcEEEEECCCCCCCCCCCCc-cccCHHHHHHHH
Confidence 5678899999999999999999999999999999999999999976 59999999999999987653 357889999999
Q ss_pred HHHHHHhCCceEEEEEechhHHHHHHHHHhCCCceeEEEEecCCC
Q 025885 84 IGLLDKLGIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPF 128 (247)
Q Consensus 84 ~~~~~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~ 128 (247)
.+++++++.++++++||||||.+++.++..+|++|+++|+++++.
T Consensus 92 ~~~~~~~~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~ 136 (286)
T PRK03204 92 GEFVDHLGLDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWF 136 (286)
T ss_pred HHHHHHhCCCCEEEEEECccHHHHHHHHHhChhheeEEEEECccc
Confidence 999999999999999999999999999999999999999987654
No 7
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.91 E-value=1.2e-23 Score=176.83 Aligned_cols=121 Identities=24% Similarity=0.295 Sum_probs=109.2
Q ss_pred ceEEEEeCCEEEEEEee--CCC-CeEEEEcCCCCChhhHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHH
Q 025885 5 EHTTVATNGINMHVASI--GTG-PAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVG 81 (247)
Q Consensus 5 ~~~~~~~~g~~~~~~~~--g~~-~~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~ 81 (247)
-.++++++|.+++|... +++ ++|||+||++++...|..+++.|.+ +|+|+++|+||||.|+.+. ..++.+.+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~plvllHG~~~~~~~w~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~--~~~~~~~~~~ 79 (276)
T TIGR02240 3 IFRTIDLDGQSIRTAVRPGKEGLTPLLIFNGIGANLELVFPFIEALDP-DLEVIAFDVPGVGGSSTPR--HPYRFPGLAK 79 (276)
T ss_pred eEEEeccCCcEEEEEEecCCCCCCcEEEEeCCCcchHHHHHHHHHhcc-CceEEEECCCCCCCCCCCC--CcCcHHHHHH
Confidence 35678889999999764 334 7999999999999999999999976 5999999999999998764 4678999999
Q ss_pred HHHHHHHHhCCceEEEEEechhHHHHHHHHHhCCCceeEEEEecCCC
Q 025885 82 DLIGLLDKLGIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPF 128 (247)
Q Consensus 82 ~~~~~~~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~ 128 (247)
++.+++++++.++++||||||||.+++.+|.++|++|+++|+++++.
T Consensus 80 ~~~~~i~~l~~~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~ 126 (276)
T TIGR02240 80 LAARMLDYLDYGQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAA 126 (276)
T ss_pred HHHHHHHHhCcCceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCC
Confidence 99999999999999999999999999999999999999999998764
No 8
>PLN02578 hydrolase
Probab=99.89 E-value=3.1e-22 Score=174.20 Aligned_cols=120 Identities=23% Similarity=0.364 Sum_probs=110.0
Q ss_pred eEEEEeCCEEEEEEeeCCCCeEEEEcCCCCChhhHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q 025885 6 HTTVATNGINMHVASIGTGPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIG 85 (247)
Q Consensus 6 ~~~~~~~g~~~~~~~~g~~~~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~ 85 (247)
..+++.+|.+++|...|++|+|||+||+++++..|+.+++.|++ +|+|+++|+||||.|+.+. ..|+...+++++.+
T Consensus 68 ~~~~~~~~~~i~Y~~~g~g~~vvliHG~~~~~~~w~~~~~~l~~-~~~v~~~D~~G~G~S~~~~--~~~~~~~~a~~l~~ 144 (354)
T PLN02578 68 YNFWTWRGHKIHYVVQGEGLPIVLIHGFGASAFHWRYNIPELAK-KYKVYALDLLGFGWSDKAL--IEYDAMVWRDQVAD 144 (354)
T ss_pred ceEEEECCEEEEEEEcCCCCeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCcc--cccCHHHHHHHHHH
Confidence 35567789999999999999999999999999999999999976 5999999999999998775 46888999999999
Q ss_pred HHHHhCCceEEEEEechhHHHHHHHHHhCCCceeEEEEecCCC
Q 025885 86 LLDKLGIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPF 128 (247)
Q Consensus 86 ~~~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~ 128 (247)
+++.++.++++++|||+||.+++.+|.++|++|+++|+++++.
T Consensus 145 ~i~~~~~~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~ 187 (354)
T PLN02578 145 FVKEVVKEPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAG 187 (354)
T ss_pred HHHHhccCCeEEEEECHHHHHHHHHHHhChHhcceEEEECCCc
Confidence 9999998999999999999999999999999999999998653
No 9
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.89 E-value=2.7e-22 Score=168.59 Aligned_cols=124 Identities=30% Similarity=0.400 Sum_probs=102.1
Q ss_pred CceEEEEeC-----CEEEEEEeeCCCCeEEEEcCCCCChhhHHH---HHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCC
Q 025885 4 IEHTTVATN-----GINMHVASIGTGPAVLFIHGFPELWYSWRN---QLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYT 75 (247)
Q Consensus 4 ~~~~~~~~~-----g~~~~~~~~g~~~~vvllHG~~~~~~~~~~---~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~ 75 (247)
.+.+++.++ +.+++|...|++|+|||+||++.+...|.. .+..+.+.||+|+++|+||||.|+.+.......
T Consensus 5 ~~~~~~~~~~~~~~~~~~~y~~~g~~~~ivllHG~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~ 84 (282)
T TIGR03343 5 STSKFVKINEKGLSNFRIHYNEAGNGEAVIMLHGGGPGAGGWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDEQRG 84 (282)
T ss_pred CcceEEEcccccccceeEEEEecCCCCeEEEECCCCCchhhHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCccccc
Confidence 344555554 678999999999999999999988877764 355666778999999999999997653211222
Q ss_pred HHHHHHHHHHHHHHhCCceEEEEEechhHHHHHHHHHhCCCceeEEEEecCCC
Q 025885 76 ALHLVGDLIGLLDKLGIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPF 128 (247)
Q Consensus 76 ~~~~~~~~~~~~~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~ 128 (247)
...++++.++++.++.++++++||||||.+++.+|.++|++|+++|+++++.
T Consensus 85 -~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 136 (282)
T TIGR03343 85 -LVNARAVKGLMDALDIEKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGG 136 (282)
T ss_pred -chhHHHHHHHHHHcCCCCeeEEEECchHHHHHHHHHhChHhhceEEEECCCC
Confidence 2468899999999999999999999999999999999999999999998653
No 10
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.88 E-value=8.7e-22 Score=164.54 Aligned_cols=122 Identities=30% Similarity=0.460 Sum_probs=110.9
Q ss_pred ceEEEEeCCEEEEEEeeCC--CCeEEEEcCCCCChhhHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHH
Q 025885 5 EHTTVATNGINMHVASIGT--GPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGD 82 (247)
Q Consensus 5 ~~~~~~~~g~~~~~~~~g~--~~~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~ 82 (247)
..+++++++.+++|.+.|+ +|+|||+||++++...|+.+++.|++ +|+|+++|+||||.|+.+.. ..++.+.+++|
T Consensus 7 ~~~~~~~~~~~~~~~~~g~~~~~~vv~~hG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~~ 84 (278)
T TIGR03056 7 CSRRVTVGPFHWHVQDMGPTAGPLLLLLHGTGASTHSWRDLMPPLAR-SFRVVAPDLPGHGFTRAPFR-FRFTLPSMAED 84 (278)
T ss_pred ccceeeECCEEEEEEecCCCCCCeEEEEcCCCCCHHHHHHHHHHHhh-CcEEEeecCCCCCCCCCccc-cCCCHHHHHHH
Confidence 4567899999999999885 78999999999999999999999976 69999999999999987653 36789999999
Q ss_pred HHHHHHHhCCceEEEEEechhHHHHHHHHHhCCCceeEEEEecCCC
Q 025885 83 LIGLLDKLGIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPF 128 (247)
Q Consensus 83 ~~~~~~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~ 128 (247)
+.+++++++.++++|+||||||.+++.+|.++|++++++|++++..
T Consensus 85 l~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~ 130 (278)
T TIGR03056 85 LSALCAAEGLSPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAAL 130 (278)
T ss_pred HHHHHHHcCCCCceEEEECccHHHHHHHHHhCCcccceEEEEcCcc
Confidence 9999999998999999999999999999999999999999998754
No 11
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.88 E-value=8.7e-22 Score=172.19 Aligned_cols=122 Identities=32% Similarity=0.488 Sum_probs=110.5
Q ss_pred EEEEeCCEEEEEEeeCC--CCeEEEEcCCCCChhhHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCC--CCCCHHHHHHH
Q 025885 7 TTVATNGINMHVASIGT--GPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSV--TSYTALHLVGD 82 (247)
Q Consensus 7 ~~~~~~g~~~~~~~~g~--~~~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~--~~~~~~~~~~~ 82 (247)
..++.++.+++|.+.|+ +|+|||+||++++...|+.+++.|++ +|+|+++|+||||.|+.+... ..++.++++++
T Consensus 108 ~~~~~~~~~~~y~~~G~~~~~~ivllHG~~~~~~~w~~~~~~L~~-~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~~ 186 (383)
T PLN03084 108 SQASSDLFRWFCVESGSNNNPPVLLIHGFPSQAYSYRKVLPVLSK-NYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVSS 186 (383)
T ss_pred eEEcCCceEEEEEecCCCCCCeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCCcccccccCCHHHHHHH
Confidence 34567999999999884 68999999999999999999999976 799999999999999877531 25899999999
Q ss_pred HHHHHHHhCCceEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCC
Q 025885 83 LIGLLDKLGIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFP 129 (247)
Q Consensus 83 ~~~~~~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~~ 129 (247)
+.+++++++.++++|+|||+||.+++.+|..+|++|+++|+++++..
T Consensus 187 l~~~i~~l~~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~ 233 (383)
T PLN03084 187 LESLIDELKSDKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLT 233 (383)
T ss_pred HHHHHHHhCCCCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCc
Confidence 99999999999999999999999999999999999999999997753
No 12
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.88 E-value=1.3e-21 Score=174.63 Aligned_cols=126 Identities=25% Similarity=0.423 Sum_probs=109.0
Q ss_pred CCceEEEEeCCEEEEEEeeCC-----CCeEEEEcCCCCChhhHHH-HHHHHH---HCCCEEEEeCCCCCCCCCCCCCCCC
Q 025885 3 KIEHTTVATNGINMHVASIGT-----GPAVLFIHGFPELWYSWRN-QLLYLS---SRGYRAIAPDLRGYGDTDAPPSVTS 73 (247)
Q Consensus 3 ~~~~~~~~~~g~~~~~~~~g~-----~~~vvllHG~~~~~~~~~~-~~~~l~---~~g~~v~~~d~~G~G~s~~~~~~~~ 73 (247)
.+.+..+++++.++||...|+ +|+|||+||++++...|.. +++.|. +++|+|+++|+||||.|+.+.. ..
T Consensus 175 ~~~~~~~~~~~~~l~~~~~gp~~~~~k~~VVLlHG~~~s~~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~-~~ 253 (481)
T PLN03087 175 KFCTSWLSSSNESLFVHVQQPKDNKAKEDVLFIHGFISSSAFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPAD-SL 253 (481)
T ss_pred ceeeeeEeeCCeEEEEEEecCCCCCCCCeEEEECCCCccHHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCC-Cc
Confidence 345677888999999998773 4799999999999999985 456665 3689999999999999987643 45
Q ss_pred CCHHHHHHHHH-HHHHHhCCceEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCC
Q 025885 74 YTALHLVGDLI-GLLDKLGIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFP 129 (247)
Q Consensus 74 ~~~~~~~~~~~-~~~~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~~ 129 (247)
|+.+++++++. .+++.++.++++++||||||.+++.+|.++|++|+++|+++++..
T Consensus 254 ytl~~~a~~l~~~ll~~lg~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~ 310 (481)
T PLN03087 254 YTLREHLEMIERSVLERYKVKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYY 310 (481)
T ss_pred CCHHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCcc
Confidence 88999999994 899999999999999999999999999999999999999987654
No 13
>PLN02965 Probable pheophorbidase
Probab=99.87 E-value=8.5e-22 Score=163.77 Aligned_cols=101 Identities=23% Similarity=0.324 Sum_probs=92.8
Q ss_pred eEEEEcCCCCChhhHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC-ceEEEEEechhH
Q 025885 26 AVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGI-HQVFLVGHDWGA 104 (247)
Q Consensus 26 ~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~lvGhS~Gg 104 (247)
+|||+||++.+...|+.+++.|.+.||+|+++|+||||.|+.+.. ..++.+++++|+.++++.++. ++++||||||||
T Consensus 5 ~vvllHG~~~~~~~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~~-~~~~~~~~a~dl~~~l~~l~~~~~~~lvGhSmGG 83 (255)
T PLN02965 5 HFVFVHGASHGAWCWYKLATLLDAAGFKSTCVDLTGAGISLTDSN-TVSSSDQYNRPLFALLSDLPPDHKVILVGHSIGG 83 (255)
T ss_pred EEEEECCCCCCcCcHHHHHHHHhhCCceEEEecCCcCCCCCCCcc-ccCCHHHHHHHHHHHHHhcCCCCCEEEEecCcch
Confidence 599999999999999999999988899999999999999976542 357899999999999999987 499999999999
Q ss_pred HHHHHHHHhCCCceeEEEEecCC
Q 025885 105 LIAWYFCLFRPDRVKALVNMSVP 127 (247)
Q Consensus 105 ~~a~~~a~~~p~~v~~lv~~~~~ 127 (247)
.++..+|.++|++|+++|++++.
T Consensus 84 ~ia~~~a~~~p~~v~~lvl~~~~ 106 (255)
T PLN02965 84 GSVTEALCKFTDKISMAIYVAAA 106 (255)
T ss_pred HHHHHHHHhCchheeEEEEEccc
Confidence 99999999999999999999875
No 14
>PRK06489 hypothetical protein; Provisional
Probab=99.87 E-value=1.2e-21 Score=170.88 Aligned_cols=117 Identities=26% Similarity=0.384 Sum_probs=98.7
Q ss_pred eCCEEEEEEeeCC---------CCeEEEEcCCCCChhhHH--HHHHHH-------HHCCCEEEEeCCCCCCCCCCCCCC-
Q 025885 11 TNGINMHVASIGT---------GPAVLFIHGFPELWYSWR--NQLLYL-------SSRGYRAIAPDLRGYGDTDAPPSV- 71 (247)
Q Consensus 11 ~~g~~~~~~~~g~---------~~~vvllHG~~~~~~~~~--~~~~~l-------~~~g~~v~~~d~~G~G~s~~~~~~- 71 (247)
++|.+++|...|+ +|+|||+||++++...|. .+.+.| ..++|+|+++|+||||.|+.+...
T Consensus 47 ~~g~~i~y~~~G~~~~~~~~~~gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~~ 126 (360)
T PRK06489 47 LPELRLHYTTLGTPHRNADGEIDNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDGL 126 (360)
T ss_pred cCCceEEEEecCCCCcccccCCCCeEEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcCC
Confidence 5789999999986 789999999999988886 455544 135799999999999999876431
Q ss_pred ----CCCCHHHHHHHHHHH-HHHhCCceEE-EEEechhHHHHHHHHHhCCCceeEEEEecCC
Q 025885 72 ----TSYTALHLVGDLIGL-LDKLGIHQVF-LVGHDWGALIAWYFCLFRPDRVKALVNMSVP 127 (247)
Q Consensus 72 ----~~~~~~~~~~~~~~~-~~~l~~~~~~-lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~ 127 (247)
..|+++++++++.++ ++++++++++ ++||||||.+|+.+|.++|++|+++|++++.
T Consensus 127 ~~~~~~~~~~~~a~~~~~~l~~~lgi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~ 188 (360)
T PRK06489 127 RAAFPRYDYDDMVEAQYRLVTEGLGVKHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQ 188 (360)
T ss_pred CCCCCcccHHHHHHHHHHHHHHhcCCCceeEEEEECHHHHHHHHHHHhCchhhheeeeeccC
Confidence 147889999988885 4889999985 8999999999999999999999999999764
No 15
>PRK10749 lysophospholipase L2; Provisional
Probab=99.86 E-value=1.4e-20 Score=162.42 Aligned_cols=124 Identities=18% Similarity=0.198 Sum_probs=106.2
Q ss_pred ceEEEEeCCEEEEEEeeC---CCCeEEEEcCCCCChhhHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCC----CCCCHH
Q 025885 5 EHTTVATNGINMHVASIG---TGPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSV----TSYTAL 77 (247)
Q Consensus 5 ~~~~~~~~g~~~~~~~~g---~~~~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~----~~~~~~ 77 (247)
+..++..+|.+++|...+ ++++|||+||+.++...|..++..+.++||+|+++|+||||.|+.+... ..++.+
T Consensus 32 ~~~~~~~~g~~l~~~~~~~~~~~~~vll~HG~~~~~~~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~ 111 (330)
T PRK10749 32 EAEFTGVDDIPIRFVRFRAPHHDRVVVICPGRIESYVKYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPHRGHVERFN 111 (330)
T ss_pred ceEEEcCCCCEEEEEEccCCCCCcEEEEECCccchHHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCCcCccccHH
Confidence 345566799999999865 3578999999999999999999999889999999999999999764321 125788
Q ss_pred HHHHHHHHHHHHh----CCceEEEEEechhHHHHHHHHHhCCCceeEEEEecCCC
Q 025885 78 HLVGDLIGLLDKL----GIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPF 128 (247)
Q Consensus 78 ~~~~~~~~~~~~l----~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~ 128 (247)
++++|+.++++.+ +..+++++||||||.++..++.++|++++++|++++..
T Consensus 112 ~~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~ 166 (330)
T PRK10749 112 DYVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMF 166 (330)
T ss_pred HHHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchh
Confidence 9999999999887 56789999999999999999999999999999987654
No 16
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.86 E-value=6e-21 Score=157.95 Aligned_cols=101 Identities=22% Similarity=0.341 Sum_probs=93.3
Q ss_pred CCCeEEEEcCCCCChhhHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEech
Q 025885 23 TGPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVFLVGHDW 102 (247)
Q Consensus 23 ~~~~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~lvGhS~ 102 (247)
++|+|||+||++++...|..++..|.+ +|+|+++|+||||.|..+. .++..++++|+.++++.++.++++++||||
T Consensus 15 ~~~~iv~lhG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~s~~~~---~~~~~~~~~d~~~~l~~l~~~~~~lvGhS~ 90 (255)
T PRK10673 15 NNSPIVLVHGLFGSLDNLGVLARDLVN-DHDIIQVDMRNHGLSPRDP---VMNYPAMAQDLLDTLDALQIEKATFIGHSM 90 (255)
T ss_pred CCCCEEEECCCCCchhHHHHHHHHHhh-CCeEEEECCCCCCCCCCCC---CCCHHHHHHHHHHHHHHcCCCceEEEEECH
Confidence 468999999999999999999999976 6999999999999997653 578999999999999999999999999999
Q ss_pred hHHHHHHHHHhCCCceeEEEEecCC
Q 025885 103 GALIAWYFCLFRPDRVKALVNMSVP 127 (247)
Q Consensus 103 Gg~~a~~~a~~~p~~v~~lv~~~~~ 127 (247)
||.+++.+|.++|++|+++|++++.
T Consensus 91 Gg~va~~~a~~~~~~v~~lvli~~~ 115 (255)
T PRK10673 91 GGKAVMALTALAPDRIDKLVAIDIA 115 (255)
T ss_pred HHHHHHHHHHhCHhhcceEEEEecC
Confidence 9999999999999999999999753
No 17
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.86 E-value=5.6e-21 Score=160.61 Aligned_cols=116 Identities=22% Similarity=0.291 Sum_probs=102.6
Q ss_pred eCCEEEEEEee-CCCCeEEEEcCCCCChhhHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 025885 11 TNGINMHVASI-GTGPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDK 89 (247)
Q Consensus 11 ~~g~~~~~~~~-g~~~~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~ 89 (247)
-||-+++|.+. +++|+|||+||+..+...|..++..|.++||+|+++|+||||.|..+.. ..++.+++++++.++++.
T Consensus 4 ~~~~~~~~~~~~~~~p~vvliHG~~~~~~~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~-~~~~~~~~~~~l~~~i~~ 82 (273)
T PLN02211 4 ENGEEVTDMKPNRQPPHFVLIHGISGGSWCWYKIRCLMENSGYKVTCIDLKSAGIDQSDAD-SVTTFDEYNKPLIDFLSS 82 (273)
T ss_pred ccccccccccccCCCCeEEEECCCCCCcCcHHHHHHHHHhCCCEEEEecccCCCCCCCCcc-cCCCHHHHHHHHHHHHHh
Confidence 47888999887 5679999999999999999999999988899999999999998754331 247889999999999999
Q ss_pred hC-CceEEEEEechhHHHHHHHHHhCCCceeEEEEecCC
Q 025885 90 LG-IHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVP 127 (247)
Q Consensus 90 l~-~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~ 127 (247)
++ .++++||||||||.++..++..+|++|+++|++++.
T Consensus 83 l~~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~ 121 (273)
T PLN02211 83 LPENEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAAT 121 (273)
T ss_pred cCCCCCEEEEEECchHHHHHHHHHhChhheeEEEEeccc
Confidence 85 579999999999999999999999999999999754
No 18
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.85 E-value=6e-21 Score=158.50 Aligned_cols=104 Identities=23% Similarity=0.371 Sum_probs=90.3
Q ss_pred EEEEeeCCCC-eEEEEcCCCCChhhHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCce
Q 025885 16 MHVASIGTGP-AVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQ 94 (247)
Q Consensus 16 ~~~~~~g~~~-~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 94 (247)
++|...|+|+ +|||+||+++++..|+.+++.|.+ .|+|+++|+||||.|+.+. .++.+++++++. +++.++
T Consensus 4 ~~y~~~G~g~~~ivllHG~~~~~~~w~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~---~~~~~~~~~~l~----~~~~~~ 75 (256)
T PRK10349 4 IWWQTKGQGNVHLVLLHGWGLNAEVWRCIDEELSS-HFTLHLVDLPGFGRSRGFG---ALSLADMAEAVL----QQAPDK 75 (256)
T ss_pred cchhhcCCCCCeEEEECCCCCChhHHHHHHHHHhc-CCEEEEecCCCCCCCCCCC---CCCHHHHHHHHH----hcCCCC
Confidence 6788888886 699999999999999999999986 4999999999999997543 467777666654 356789
Q ss_pred EEEEEechhHHHHHHHHHhCCCceeEEEEecCC
Q 025885 95 VFLVGHDWGALIAWYFCLFRPDRVKALVNMSVP 127 (247)
Q Consensus 95 ~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~ 127 (247)
+++|||||||.+++.+|.++|++|+++|+++++
T Consensus 76 ~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~ 108 (256)
T PRK10349 76 AIWLGWSLGGLVASQIALTHPERVQALVTVASS 108 (256)
T ss_pred eEEEEECHHHHHHHHHHHhChHhhheEEEecCc
Confidence 999999999999999999999999999999764
No 19
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.85 E-value=1e-20 Score=155.52 Aligned_cols=99 Identities=23% Similarity=0.247 Sum_probs=90.0
Q ss_pred CCeEEEEcCCCCChhhHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEechh
Q 025885 24 GPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVFLVGHDWG 103 (247)
Q Consensus 24 ~~~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~lvGhS~G 103 (247)
+|+|||+||+++++..|+.+++.| + +|+|+++|+||||.|+.+. ..+.+++++|+.+++++++.++++++|||||
T Consensus 2 ~p~vvllHG~~~~~~~w~~~~~~l-~-~~~vi~~D~~G~G~S~~~~---~~~~~~~~~~l~~~l~~~~~~~~~lvG~S~G 76 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDWQPVGEAL-P-DYPRLYIDLPGHGGSAAIS---VDGFADVSRLLSQTLQSYNILPYWLVGYSLG 76 (242)
T ss_pred CCEEEEECCCCCChHHHHHHHHHc-C-CCCEEEecCCCCCCCCCcc---ccCHHHHHHHHHHHHHHcCCCCeEEEEECHH
Confidence 588999999999999999999988 3 6999999999999998764 3488999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCc-eeEEEEecCC
Q 025885 104 ALIAWYFCLFRPDR-VKALVNMSVP 127 (247)
Q Consensus 104 g~~a~~~a~~~p~~-v~~lv~~~~~ 127 (247)
|.+++.+|.++|++ |+++++++++
T Consensus 77 g~va~~~a~~~~~~~v~~lvl~~~~ 101 (242)
T PRK11126 77 GRIAMYYACQGLAGGLCGLIVEGGN 101 (242)
T ss_pred HHHHHHHHHhCCcccccEEEEeCCC
Confidence 99999999999765 9999988754
No 20
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.85 E-value=1.7e-20 Score=162.91 Aligned_cols=120 Identities=23% Similarity=0.302 Sum_probs=101.2
Q ss_pred EEEeCCEEEEEEeeCC-----CCeEEEEcCCCCChhh-HHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHH
Q 025885 8 TVATNGINMHVASIGT-----GPAVLFIHGFPELWYS-WRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVG 81 (247)
Q Consensus 8 ~~~~~g~~~~~~~~g~-----~~~vvllHG~~~~~~~-~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~ 81 (247)
.++.+|.+++|..+++ +++|||+||++++... |+.++..|+++||+|+++|+||||.|+.+.. ...+.+++++
T Consensus 66 ~~~~~g~~l~~~~~~p~~~~~~~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~-~~~~~~~~~~ 144 (349)
T PLN02385 66 EVNSRGVEIFSKSWLPENSRPKAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYPGFGLSEGLHG-YIPSFDDLVD 144 (349)
T ss_pred EEcCCCCEEEEEEEecCCCCCCeEEEEECCCCCccchHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCC-CcCCHHHHHH
Confidence 4456899999987652 4679999999988654 6889999998899999999999999986542 2357889999
Q ss_pred HHHHHHHHhCCc------eEEEEEechhHHHHHHHHHhCCCceeEEEEecCCC
Q 025885 82 DLIGLLDKLGIH------QVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPF 128 (247)
Q Consensus 82 ~~~~~~~~l~~~------~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~ 128 (247)
|+.++++.+..+ +++|+||||||.+++.++.++|++++++|++++..
T Consensus 145 dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~ 197 (349)
T PLN02385 145 DVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMC 197 (349)
T ss_pred HHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEecccc
Confidence 999999887532 79999999999999999999999999999998643
No 21
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.84 E-value=7.1e-21 Score=164.97 Aligned_cols=117 Identities=26% Similarity=0.383 Sum_probs=98.0
Q ss_pred EEEeCCEEEEEEeeCC-CCeEEEEcCCCCChh------------hHHHHHH---HHHHCCCEEEEeCCCCCCCCCCCCCC
Q 025885 8 TVATNGINMHVASIGT-GPAVLFIHGFPELWY------------SWRNQLL---YLSSRGYRAIAPDLRGYGDTDAPPSV 71 (247)
Q Consensus 8 ~~~~~g~~~~~~~~g~-~~~vvllHG~~~~~~------------~~~~~~~---~l~~~g~~v~~~d~~G~G~s~~~~~~ 71 (247)
..+++|.+++|...|+ ++++||+||+.++.. .|..++. .|...+|+|+++|+||||.|..
T Consensus 40 ~~~~~~~~l~y~~~G~~~~p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~~---- 115 (343)
T PRK08775 40 HAGLEDLRLRYELIGPAGAPVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGADGSLD---- 115 (343)
T ss_pred CCCCCCceEEEEEeccCCCCEEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCCCCCCC----
Confidence 3455899999999995 767888877766655 6888886 5644479999999999998742
Q ss_pred CCCCHHHHHHHHHHHHHHhCCceE-EEEEechhHHHHHHHHHhCCCceeEEEEecCCC
Q 025885 72 TSYTALHLVGDLIGLLDKLGIHQV-FLVGHDWGALIAWYFCLFRPDRVKALVNMSVPF 128 (247)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~l~~~~~-~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~ 128 (247)
..++..++++|+.+++++++++++ +||||||||++++.+|.++|++|+++|++++..
T Consensus 116 ~~~~~~~~a~dl~~ll~~l~l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~ 173 (343)
T PRK08775 116 VPIDTADQADAIALLLDALGIARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAH 173 (343)
T ss_pred CCCCHHHHHHHHHHHHHHcCCCcceEEEEECHHHHHHHHHHHHChHhhheEEEECccc
Confidence 246788899999999999999775 799999999999999999999999999998653
No 22
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.84 E-value=3e-20 Score=158.63 Aligned_cols=123 Identities=24% Similarity=0.396 Sum_probs=102.0
Q ss_pred ceEEEEe-CCEEEEEEeeCC--CCeEEEEcCCCCChhhHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHH
Q 025885 5 EHTTVAT-NGINMHVASIGT--GPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVG 81 (247)
Q Consensus 5 ~~~~~~~-~g~~~~~~~~g~--~~~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~ 81 (247)
...+++. +|.+++|...|+ +++|||+||++++...+ .+...+...+|+|+++|+||||.|+.+.....++..++++
T Consensus 5 ~~~~~~~~~~~~l~y~~~g~~~~~~lvllHG~~~~~~~~-~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 83 (306)
T TIGR01249 5 VSGYLNVSDNHQLYYEQSGNPDGKPVVFLHGGPGSGTDP-GCRRFFDPETYRIVLFDQRGCGKSTPHACLEENTTWDLVA 83 (306)
T ss_pred cCCeEEcCCCcEEEEEECcCCCCCEEEEECCCCCCCCCH-HHHhccCccCCEEEEECCCCCCCCCCCCCcccCCHHHHHH
Confidence 3455655 578999999885 78999999998876554 3444454568999999999999998654333567788999
Q ss_pred HHHHHHHHhCCceEEEEEechhHHHHHHHHHhCCCceeEEEEecCCC
Q 025885 82 DLIGLLDKLGIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPF 128 (247)
Q Consensus 82 ~~~~~~~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~ 128 (247)
|+..++++++.++++++||||||.+++.++.++|++|+++|++++..
T Consensus 84 dl~~l~~~l~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~ 130 (306)
T TIGR01249 84 DIEKLREKLGIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFL 130 (306)
T ss_pred HHHHHHHHcCCCCEEEEEECHHHHHHHHHHHHChHhhhhheeecccc
Confidence 99999999999999999999999999999999999999999987643
No 23
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.84 E-value=2.5e-20 Score=153.30 Aligned_cols=111 Identities=30% Similarity=0.479 Sum_probs=98.0
Q ss_pred EEEEeeC----CCCeEEEEcCCCCChhhHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC
Q 025885 16 MHVASIG----TGPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLG 91 (247)
Q Consensus 16 ~~~~~~g----~~~~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~l~ 91 (247)
++|...| ++|+|||+||+++++..|..+++.|.+ +|+|+++|+||||.|..+.. ..++..++++++.++++.++
T Consensus 1 ~~~~~~~~~~~~~~~iv~lhG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~~~~~~i~~~~ 78 (257)
T TIGR03611 1 MHYELHGPPDADAPVVVLSSGLGGSGSYWAPQLDVLTQ-RFHVVTYDHRGTGRSPGELP-PGYSIAHMADDVLQLLDALN 78 (257)
T ss_pred CEEEEecCCCCCCCEEEEEcCCCcchhHHHHHHHHHHh-ccEEEEEcCCCCCCCCCCCc-ccCCHHHHHHHHHHHHHHhC
Confidence 3566655 268999999999999999999998875 69999999999999976542 46789999999999999999
Q ss_pred CceEEEEEechhHHHHHHHHHhCCCceeEEEEecCCC
Q 025885 92 IHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPF 128 (247)
Q Consensus 92 ~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~ 128 (247)
.++++++||||||.+++.++.++|++|+++|++++..
T Consensus 79 ~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~ 115 (257)
T TIGR03611 79 IERFHFVGHALGGLIGLQLALRYPERLLSLVLINAWS 115 (257)
T ss_pred CCcEEEEEechhHHHHHHHHHHChHHhHHheeecCCC
Confidence 9999999999999999999999999999999988643
No 24
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.84 E-value=2.9e-20 Score=149.19 Aligned_cols=102 Identities=47% Similarity=0.729 Sum_probs=93.0
Q ss_pred EEEEcCCCCChhhHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEechhHHH
Q 025885 27 VLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVFLVGHDWGALI 106 (247)
Q Consensus 27 vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~lvGhS~Gg~~ 106 (247)
|||+||++++...|..+++.|+ +||+|+++|+||+|.|+.+.....++.++.++|+.+++++++.++++++|||+||.+
T Consensus 1 vv~~hG~~~~~~~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg~~ 79 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAEALA-RGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDALGIKKVILVGHSMGGMI 79 (228)
T ss_dssp EEEE-STTTTGGGGHHHHHHHH-TTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHTTTSSEEEEEETHHHHH
T ss_pred eEEECCCCCCHHHHHHHHHHHh-CCCEEEEEecCCccccccccccCCcchhhhhhhhhhccccccccccccccccccccc
Confidence 7999999999999999999995 799999999999999987654346788999999999999999999999999999999
Q ss_pred HHHHHHhCCCceeEEEEecCCCC
Q 025885 107 AWYFCLFRPDRVKALVNMSVPFP 129 (247)
Q Consensus 107 a~~~a~~~p~~v~~lv~~~~~~~ 129 (247)
++.++.++|++|+++|+++++..
T Consensus 80 a~~~a~~~p~~v~~~vl~~~~~~ 102 (228)
T PF12697_consen 80 ALRLAARYPDRVKGLVLLSPPPP 102 (228)
T ss_dssp HHHHHHHSGGGEEEEEEESESSS
T ss_pred ccccccccccccccceeeccccc
Confidence 99999999999999999987653
No 25
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.83 E-value=1e-19 Score=151.72 Aligned_cols=121 Identities=26% Similarity=0.408 Sum_probs=101.1
Q ss_pred EEEeCCEEEEEEeeC---CCCeEEEEcCCCCChhhH-HHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCC-CCCHHHHHHH
Q 025885 8 TVATNGINMHVASIG---TGPAVLFIHGFPELWYSW-RNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVT-SYTALHLVGD 82 (247)
Q Consensus 8 ~~~~~g~~~~~~~~g---~~~~vvllHG~~~~~~~~-~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~-~~~~~~~~~~ 82 (247)
++++++.++.|...+ ++++|||+||++++...| ..+...+.+.||+|+++|+||+|.|..+.... .++.+.++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~ 85 (288)
T TIGR01250 6 IITVDGGYHLFTKTGGEGEKIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFVDE 85 (288)
T ss_pred eecCCCCeEEEEeccCCCCCCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHHHH
Confidence 577788888888765 368999999987776554 55555666559999999999999998654322 3788999999
Q ss_pred HHHHHHHhCCceEEEEEechhHHHHHHHHHhCCCceeEEEEecCCC
Q 025885 83 LIGLLDKLGIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPF 128 (247)
Q Consensus 83 ~~~~~~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~ 128 (247)
+.+++++++.++++++||||||.+++.+|..+|++++++|++++..
T Consensus 86 ~~~~~~~~~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 131 (288)
T TIGR01250 86 LEEVREKLGLDKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLD 131 (288)
T ss_pred HHHHHHHcCCCcEEEEEeehHHHHHHHHHHhCccccceeeEecccc
Confidence 9999999999999999999999999999999999999999887543
No 26
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.83 E-value=1e-19 Score=156.88 Aligned_cols=119 Identities=18% Similarity=0.342 Sum_probs=97.3
Q ss_pred EEeCCEEEEEEeeC------CCCeEEEEcCCCCCh-hhHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHH
Q 025885 9 VATNGINMHVASIG------TGPAVLFIHGFPELW-YSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVG 81 (247)
Q Consensus 9 ~~~~g~~~~~~~~g------~~~~vvllHG~~~~~-~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~ 81 (247)
...+|.+++|...+ .+++|||+||++.+. +.|..+...|+++||+|+++|+||||.|+.+.. ...+.+.+++
T Consensus 38 ~~~dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~~~-~~~~~~~~~~ 116 (330)
T PLN02298 38 TSPRGLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQSTAIFLAQMGFACFALDLEGHGRSEGLRA-YVPNVDLVVE 116 (330)
T ss_pred EcCCCCEEEEEEEecCCCCCCceEEEEEcCCCCCcceehhHHHHHHHhCCCEEEEecCCCCCCCCCccc-cCCCHHHHHH
Confidence 34589999997653 134699999998654 456777888988999999999999999975432 2357788899
Q ss_pred HHHHHHHHhCC------ceEEEEEechhHHHHHHHHHhCCCceeEEEEecCCC
Q 025885 82 DLIGLLDKLGI------HQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPF 128 (247)
Q Consensus 82 ~~~~~~~~l~~------~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~ 128 (247)
|+.++++.+.. .+++|+||||||.+++.++..+|++|+++|++++..
T Consensus 117 D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~ 169 (330)
T PLN02298 117 DCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMC 169 (330)
T ss_pred HHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccc
Confidence 99999998753 369999999999999999999999999999998654
No 27
>PRK07581 hypothetical protein; Validated
Probab=99.83 E-value=2.3e-20 Score=161.47 Aligned_cols=119 Identities=19% Similarity=0.317 Sum_probs=90.9
Q ss_pred EeCCEEEEEEeeCC----C-CeEEEEcCCCCChhhHHHHH---HHHHHCCCEEEEeCCCCCCCCCCCCCC-CCCCHH---
Q 025885 10 ATNGINMHVASIGT----G-PAVLFIHGFPELWYSWRNQL---LYLSSRGYRAIAPDLRGYGDTDAPPSV-TSYTAL--- 77 (247)
Q Consensus 10 ~~~g~~~~~~~~g~----~-~~vvllHG~~~~~~~~~~~~---~~l~~~g~~v~~~d~~G~G~s~~~~~~-~~~~~~--- 77 (247)
+++|++++|...|+ + |+||++||++++...|..++ +.|...+|+||++|+||||.|+.+... ..++.+
T Consensus 22 ~~~~~~l~y~~~G~~~~~~~~~vll~~~~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 101 (339)
T PRK07581 22 TLPDARLAYKTYGTLNAAKDNAILYPTWYSGTHQDNEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARFP 101 (339)
T ss_pred CcCCceEEEEecCccCCCCCCEEEEeCCCCCCcccchhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCCC
Confidence 34688999998874 3 45777777777776776554 366656899999999999999866421 123332
Q ss_pred --HHHHHHHH----HHHHhCCce-EEEEEechhHHHHHHHHHhCCCceeEEEEecCCC
Q 025885 78 --HLVGDLIG----LLDKLGIHQ-VFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPF 128 (247)
Q Consensus 78 --~~~~~~~~----~~~~l~~~~-~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~ 128 (247)
.+++|+.+ +++++++++ ++||||||||++|+.+|.++|++|+++|++++..
T Consensus 102 ~~~~~~~~~~~~~~l~~~lgi~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~ 159 (339)
T PRK07581 102 HVTIYDNVRAQHRLLTEKFGIERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTA 159 (339)
T ss_pred ceeHHHHHHHHHHHHHHHhCCCceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCC
Confidence 34556654 778899999 5899999999999999999999999999997643
No 28
>PHA02857 monoglyceride lipase; Provisional
Probab=99.83 E-value=1.8e-19 Score=151.23 Aligned_cols=121 Identities=20% Similarity=0.154 Sum_probs=97.3
Q ss_pred EEEEeCCEEEEEEeeCC----CCeEEEEcCCCCChhhHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHH
Q 025885 7 TTVATNGINMHVASIGT----GPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGD 82 (247)
Q Consensus 7 ~~~~~~g~~~~~~~~g~----~~~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~ 82 (247)
.++..||.+++|..+.+ .+.|+++||+++++..|..+++.|+++||+|+++|+||||.|+.... ...+.....+|
T Consensus 4 ~~~~~~g~~l~~~~~~~~~~~~~~v~llHG~~~~~~~~~~~~~~l~~~g~~via~D~~G~G~S~~~~~-~~~~~~~~~~d 82 (276)
T PHA02857 4 CMFNLDNDYIYCKYWKPITYPKALVFISHGAGEHSGRYEELAENISSLGILVFSHDHIGHGRSNGEKM-MIDDFGVYVRD 82 (276)
T ss_pred eeecCCCCEEEEEeccCCCCCCEEEEEeCCCccccchHHHHHHHHHhCCCEEEEccCCCCCCCCCccC-CcCCHHHHHHH
Confidence 35566899999875332 34566779999999999999999999999999999999999975321 22355666777
Q ss_pred HHHHHHHh----CCceEEEEEechhHHHHHHHHHhCCCceeEEEEecCCC
Q 025885 83 LIGLLDKL----GIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPF 128 (247)
Q Consensus 83 ~~~~~~~l----~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~ 128 (247)
+.+.++.+ ..++++|+||||||.+++.+|.++|++++++|++++..
T Consensus 83 ~~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~ 132 (276)
T PHA02857 83 VVQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLV 132 (276)
T ss_pred HHHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhCccccceEEEecccc
Confidence 77777654 34579999999999999999999999999999998754
No 29
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.82 E-value=6e-20 Score=149.80 Aligned_cols=110 Identities=35% Similarity=0.540 Sum_probs=97.7
Q ss_pred EEEEeeCC---CCeEEEEcCCCCChhhHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC
Q 025885 16 MHVASIGT---GPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGI 92 (247)
Q Consensus 16 ~~~~~~g~---~~~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~l~~ 92 (247)
++|...|+ +|+|||+||++.+...|..+++.|.. ||+|+++|+||||.|+.+. ..++..++++++.++++.++.
T Consensus 2 ~~~~~~g~~~~~~~li~~hg~~~~~~~~~~~~~~l~~-~~~v~~~d~~G~G~s~~~~--~~~~~~~~~~~~~~~i~~~~~ 78 (251)
T TIGR02427 2 LHYRLDGAADGAPVLVFINSLGTDLRMWDPVLPALTP-DFRVLRYDKRGHGLSDAPE--GPYSIEDLADDVLALLDHLGI 78 (251)
T ss_pred ceEEeecCCCCCCeEEEEcCcccchhhHHHHHHHhhc-ccEEEEecCCCCCCCCCCC--CCCCHHHHHHHHHHHHHHhCC
Confidence 56766663 47899999999999999999999864 8999999999999997654 467899999999999999998
Q ss_pred ceEEEEEechhHHHHHHHHHhCCCceeEEEEecCCC
Q 025885 93 HQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPF 128 (247)
Q Consensus 93 ~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~ 128 (247)
++++++||||||.+++.+|.++|++++++|+++++.
T Consensus 79 ~~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~ 114 (251)
T TIGR02427 79 ERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAA 114 (251)
T ss_pred CceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCcc
Confidence 999999999999999999999999999999988653
No 30
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.82 E-value=6.6e-20 Score=159.40 Aligned_cols=119 Identities=25% Similarity=0.357 Sum_probs=98.4
Q ss_pred EeCCEEEEEEeeCC-----CCeEEEEcCCCCChh-----------hHHHHHH---HHHHCCCEEEEeCCCC--CCCCCCC
Q 025885 10 ATNGINMHVASIGT-----GPAVLFIHGFPELWY-----------SWRNQLL---YLSSRGYRAIAPDLRG--YGDTDAP 68 (247)
Q Consensus 10 ~~~g~~~~~~~~g~-----~~~vvllHG~~~~~~-----------~~~~~~~---~l~~~g~~v~~~d~~G--~G~s~~~ 68 (247)
+++|.+++|...|+ +++|||+||++++.. .|..++. .|..++|+|+++|+|| +|.|...
T Consensus 12 ~~~~~~~~y~~~g~~~~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~ 91 (351)
T TIGR01392 12 VLSDVRVAYETYGTLNAERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPS 91 (351)
T ss_pred ccCCceEEEEeccccCCCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCC
Confidence 35789999999873 579999999999764 3777762 5555689999999999 5555321
Q ss_pred ----CC------CCCCCHHHHHHHHHHHHHHhCCce-EEEEEechhHHHHHHHHHhCCCceeEEEEecCCC
Q 025885 69 ----PS------VTSYTALHLVGDLIGLLDKLGIHQ-VFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPF 128 (247)
Q Consensus 69 ----~~------~~~~~~~~~~~~~~~~~~~l~~~~-~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~ 128 (247)
.. ...++.+++++++.++++++++++ ++++||||||++++.+|.++|++|+++|++++..
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 162 (351)
T TIGR01392 92 SINPGGRPYGSDFPLITIRDDVKAQKLLLDHLGIEQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSA 162 (351)
T ss_pred CCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEccCC
Confidence 10 124788999999999999999999 9999999999999999999999999999998754
No 31
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.81 E-value=2.4e-19 Score=145.90 Aligned_cols=104 Identities=36% Similarity=0.600 Sum_probs=93.9
Q ss_pred CCeEEEEcCCCCChhhHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHH-HHHHHHHhCCceEEEEEech
Q 025885 24 GPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGD-LIGLLDKLGIHQVFLVGHDW 102 (247)
Q Consensus 24 ~~~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~lvGhS~ 102 (247)
+|+|||+||++++...|..+++.|+ +||+|+++|+||+|.|+.+.....++.++++++ +..+++.++.++++++|||+
T Consensus 1 ~~~vv~~hG~~~~~~~~~~~~~~L~-~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~ 79 (251)
T TIGR03695 1 KPVLVFLHGFLGSGADWQALIELLG-PHFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQLGIEPFFLVGYSM 79 (251)
T ss_pred CCEEEEEcCCCCchhhHHHHHHHhc-ccCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHHcCCCeEEEEEecc
Confidence 4789999999999999999999998 689999999999999987654456788888988 77888888889999999999
Q ss_pred hHHHHHHHHHhCCCceeEEEEecCCC
Q 025885 103 GALIAWYFCLFRPDRVKALVNMSVPF 128 (247)
Q Consensus 103 Gg~~a~~~a~~~p~~v~~lv~~~~~~ 128 (247)
||.+++.+|.++|++|++++++++..
T Consensus 80 Gg~ia~~~a~~~~~~v~~lil~~~~~ 105 (251)
T TIGR03695 80 GGRIALYYALQYPERVQGLILESGSP 105 (251)
T ss_pred HHHHHHHHHHhCchheeeeEEecCCC
Confidence 99999999999999999999988643
No 32
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.81 E-value=1.5e-19 Score=158.68 Aligned_cols=118 Identities=25% Similarity=0.348 Sum_probs=97.0
Q ss_pred eCCEEEEEEeeCC-----CCeEEEEcCCCCChhh-------------HHHHHH---HHHHCCCEEEEeCCCCC-CCCCCC
Q 025885 11 TNGINMHVASIGT-----GPAVLFIHGFPELWYS-------------WRNQLL---YLSSRGYRAIAPDLRGY-GDTDAP 68 (247)
Q Consensus 11 ~~g~~~~~~~~g~-----~~~vvllHG~~~~~~~-------------~~~~~~---~l~~~g~~v~~~d~~G~-G~s~~~ 68 (247)
++|.+++|...|+ +|+|||+||++++... |..++. .+..++|+||++|++|+ |.|+.+
T Consensus 30 ~~~~~~~y~~~G~~~~~~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~~ 109 (379)
T PRK00175 30 LPPVELAYETYGTLNADRSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTGP 109 (379)
T ss_pred cCCceEEEEeccccCCCCCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCCC
Confidence 4688899998874 5899999999999875 666652 34345799999999983 544433
Q ss_pred CC------------CCCCCHHHHHHHHHHHHHHhCCce-EEEEEechhHHHHHHHHHhCCCceeEEEEecCCC
Q 025885 69 PS------------VTSYTALHLVGDLIGLLDKLGIHQ-VFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPF 128 (247)
Q Consensus 69 ~~------------~~~~~~~~~~~~~~~~~~~l~~~~-~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~ 128 (247)
.. ...|+..++++++.++++++++++ ++++||||||.+++.+|.++|++|+++|++++..
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 182 (379)
T PRK00175 110 SSINPDTGKPYGSDFPVITIRDWVRAQARLLDALGITRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSA 182 (379)
T ss_pred CCCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHhCCCCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCc
Confidence 21 015789999999999999999999 5999999999999999999999999999998654
No 33
>PRK05855 short chain dehydrogenase; Validated
Probab=99.80 E-value=9.9e-19 Score=161.01 Aligned_cols=123 Identities=28% Similarity=0.604 Sum_probs=103.2
Q ss_pred CceEEEEeCCEEEEEEeeCC--CCeEEEEcCCCCChhhHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHH
Q 025885 4 IEHTTVATNGINMHVASIGT--GPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVG 81 (247)
Q Consensus 4 ~~~~~~~~~g~~~~~~~~g~--~~~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~ 81 (247)
.+..+++.+|.+++|...|+ +|+|||+||++++...|+.+++.|. ++|+|+++|+||||.|+.+.....++.+++++
T Consensus 3 ~~~~~~~~~g~~l~~~~~g~~~~~~ivllHG~~~~~~~w~~~~~~L~-~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~a~ 81 (582)
T PRK05855 3 PRRTVVSSDGVRLAVYEWGDPDRPTVVLVHGYPDNHEVWDGVAPLLA-DRFRVVAYDVRGAGRSSAPKRTAAYTLARLAD 81 (582)
T ss_pred ceEEEEeeCCEEEEEEEcCCCCCCeEEEEcCCCchHHHHHHHHHHhh-cceEEEEecCCCCCCCCCCCcccccCHHHHHH
Confidence 34566778999999998884 6899999999999999999999994 58999999999999998765445688999999
Q ss_pred HHHHHHHHhCCce-EEEEEechhHHHHHHHHHh--CCCceeEEEEecCC
Q 025885 82 DLIGLLDKLGIHQ-VFLVGHDWGALIAWYFCLF--RPDRVKALVNMSVP 127 (247)
Q Consensus 82 ~~~~~~~~l~~~~-~~lvGhS~Gg~~a~~~a~~--~p~~v~~lv~~~~~ 127 (247)
|+.+++++++.++ ++|+||||||.+++.++.. .++++..++.++.+
T Consensus 82 dl~~~i~~l~~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~~ 130 (582)
T PRK05855 82 DFAAVIDAVSPDRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSGP 130 (582)
T ss_pred HHHHHHHHhCCCCcEEEEecChHHHHHHHHHhCccchhhhhhheeccCC
Confidence 9999999998765 9999999999999888776 24455555555543
No 34
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.79 E-value=1.6e-18 Score=151.22 Aligned_cols=119 Identities=28% Similarity=0.422 Sum_probs=105.7
Q ss_pred EEEEeCCEEEEEEeeCC--CCeEEEEcCCCCChhhHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q 025885 7 TTVATNGINMHVASIGT--GPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLI 84 (247)
Q Consensus 7 ~~~~~~g~~~~~~~~g~--~~~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~ 84 (247)
..+..++.+++|...|+ +++|||+||++++...|..++..|.+ +|+|+++|+||||.|.... ..++..++++++.
T Consensus 112 ~~~~~~~~~i~~~~~g~~~~~~vl~~HG~~~~~~~~~~~~~~l~~-~~~v~~~d~~g~G~s~~~~--~~~~~~~~~~~~~ 188 (371)
T PRK14875 112 RKARIGGRTVRYLRLGEGDGTPVVLIHGFGGDLNNWLFNHAALAA-GRPVIALDLPGHGASSKAV--GAGSLDELAAAVL 188 (371)
T ss_pred CcceEcCcEEEEecccCCCCCeEEEECCCCCccchHHHHHHHHhc-CCEEEEEcCCCCCCCCCCC--CCCCHHHHHHHHH
Confidence 34666788899988774 68999999999999999999999976 5999999999999996543 3568899999999
Q ss_pred HHHHHhCCceEEEEEechhHHHHHHHHHhCCCceeEEEEecCCC
Q 025885 85 GLLDKLGIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPF 128 (247)
Q Consensus 85 ~~~~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~ 128 (247)
++++.++.++++++|||+||.+++.+|..+|+++.++|+++++.
T Consensus 189 ~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~ 232 (371)
T PRK14875 189 AFLDALGIERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAG 232 (371)
T ss_pred HHHHhcCCccEEEEeechHHHHHHHHHHhCchheeEEEEECcCC
Confidence 99999999999999999999999999999999999999998653
No 35
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.79 E-value=1.2e-18 Score=145.90 Aligned_cols=108 Identities=24% Similarity=0.345 Sum_probs=95.1
Q ss_pred CCCeEEEEcCCCCChhhHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCC--CCHHHHHHHHHHHHHHhCCceEEEEEe
Q 025885 23 TGPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTS--YTALHLVGDLIGLLDKLGIHQVFLVGH 100 (247)
Q Consensus 23 ~~~~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~lvGh 100 (247)
+++++||+||++.+...|-..++.|++ .++|+++|++|+|+|++|.-..+ .....+++.+.++....++++.+||||
T Consensus 89 ~~~plVliHGyGAg~g~f~~Nf~~La~-~~~vyaiDllG~G~SSRP~F~~d~~~~e~~fvesiE~WR~~~~L~KmilvGH 167 (365)
T KOG4409|consen 89 NKTPLVLIHGYGAGLGLFFRNFDDLAK-IRNVYAIDLLGFGRSSRPKFSIDPTTAEKEFVESIEQWRKKMGLEKMILVGH 167 (365)
T ss_pred CCCcEEEEeccchhHHHHHHhhhhhhh-cCceEEecccCCCCCCCCCCCCCcccchHHHHHHHHHHHHHcCCcceeEeec
Confidence 468999999999999999999999998 69999999999999999863222 234577888899999999999999999
Q ss_pred chhHHHHHHHHHhCCCceeEEEEecCCCCCC
Q 025885 101 DWGALIAWYFCLFRPDRVKALVNMSVPFPPR 131 (247)
Q Consensus 101 S~Gg~~a~~~a~~~p~~v~~lv~~~~~~~~~ 131 (247)
|+||.++..+|.+||++|+.||++++...+.
T Consensus 168 SfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~ 198 (365)
T KOG4409|consen 168 SFGGYLAAKYALKYPERVEKLILVSPWGFPE 198 (365)
T ss_pred cchHHHHHHHHHhChHhhceEEEeccccccc
Confidence 9999999999999999999999999765544
No 36
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.78 E-value=1.2e-18 Score=141.81 Aligned_cols=98 Identities=23% Similarity=0.300 Sum_probs=83.7
Q ss_pred CCC-CeEEEEcCCCCChhhHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEe
Q 025885 22 GTG-PAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVFLVGH 100 (247)
Q Consensus 22 g~~-~~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~lvGh 100 (247)
|++ |+|||+||++++...|+.+++.|.+ +|+|+++|+||+|.|.... .++..++++++.+.+ .++++++||
T Consensus 1 g~g~~~iv~~HG~~~~~~~~~~~~~~l~~-~~~vi~~d~~G~G~s~~~~---~~~~~~~~~~~~~~~----~~~~~lvG~ 72 (245)
T TIGR01738 1 GQGNVHLVLIHGWGMNAEVFRCLDEELSA-HFTLHLVDLPGHGRSRGFG---PLSLADAAEAIAAQA----PDPAIWLGW 72 (245)
T ss_pred CCCCceEEEEcCCCCchhhHHHHHHhhcc-CeEEEEecCCcCccCCCCC---CcCHHHHHHHHHHhC----CCCeEEEEE
Confidence 456 8999999999999999999999975 6999999999999986542 456777776665433 368999999
Q ss_pred chhHHHHHHHHHhCCCceeEEEEecCC
Q 025885 101 DWGALIAWYFCLFRPDRVKALVNMSVP 127 (247)
Q Consensus 101 S~Gg~~a~~~a~~~p~~v~~lv~~~~~ 127 (247)
||||.+++.+|.++|++++++|++++.
T Consensus 73 S~Gg~~a~~~a~~~p~~v~~~il~~~~ 99 (245)
T TIGR01738 73 SLGGLVALHIAATHPDRVRALVTVASS 99 (245)
T ss_pred cHHHHHHHHHHHHCHHhhheeeEecCC
Confidence 999999999999999999999998764
No 37
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.77 E-value=1.5e-17 Score=146.96 Aligned_cols=104 Identities=20% Similarity=0.369 Sum_probs=88.1
Q ss_pred CCCeEEEEcCCCCChhhHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCC----HHHHHHHHHHHHHHhCCceEEEE
Q 025885 23 TGPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYT----ALHLVGDLIGLLDKLGIHQVFLV 98 (247)
Q Consensus 23 ~~~~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~----~~~~~~~~~~~~~~l~~~~~~lv 98 (247)
++|+|||+||++++...|...+..|.+ +|+|+++|+||||.|+.+... ..+ .+.+++++.++++.++.++++|+
T Consensus 104 ~~p~vvllHG~~~~~~~~~~~~~~L~~-~~~vi~~D~rG~G~S~~~~~~-~~~~~~~~~~~~~~i~~~~~~l~~~~~~lv 181 (402)
T PLN02894 104 DAPTLVMVHGYGASQGFFFRNFDALAS-RFRVIAIDQLGWGGSSRPDFT-CKSTEETEAWFIDSFEEWRKAKNLSNFILL 181 (402)
T ss_pred CCCEEEEECCCCcchhHHHHHHHHHHh-CCEEEEECCCCCCCCCCCCcc-cccHHHHHHHHHHHHHHHHHHcCCCCeEEE
Confidence 468999999999999999999999986 599999999999999876421 111 12356677888888898999999
Q ss_pred EechhHHHHHHHHHhCCCceeEEEEecCCC
Q 025885 99 GHDWGALIAWYFCLFRPDRVKALVNMSVPF 128 (247)
Q Consensus 99 GhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~ 128 (247)
||||||.+++.+|.++|++|+++|+++++.
T Consensus 182 GhS~GG~la~~~a~~~p~~v~~lvl~~p~~ 211 (402)
T PLN02894 182 GHSFGGYVAAKYALKHPEHVQHLILVGPAG 211 (402)
T ss_pred EECHHHHHHHHHHHhCchhhcEEEEECCcc
Confidence 999999999999999999999999998654
No 38
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.76 E-value=1.9e-17 Score=140.46 Aligned_cols=125 Identities=26% Similarity=0.357 Sum_probs=104.9
Q ss_pred ceEEEEeCCEEEEEEeeCC---C-CeEEEEcCCCCChhhHHHHHHHHHHCCCEEEEeCCCCCCCCC-CCCCCCCCCHHHH
Q 025885 5 EHTTVATNGINMHVASIGT---G-PAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTD-APPSVTSYTALHL 79 (247)
Q Consensus 5 ~~~~~~~~g~~~~~~~~g~---~-~~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~-~~~~~~~~~~~~~ 79 (247)
+..+...+|..++|..... . .+||++||+.++...|..++..|..+||.|+++|+||||.|. .... ..-++.++
T Consensus 11 ~~~~~~~d~~~~~~~~~~~~~~~~g~Vvl~HG~~Eh~~ry~~la~~l~~~G~~V~~~D~RGhG~S~r~~rg-~~~~f~~~ 89 (298)
T COG2267 11 EGYFTGADGTRLRYRTWAAPEPPKGVVVLVHGLGEHSGRYEELADDLAARGFDVYALDLRGHGRSPRGQRG-HVDSFADY 89 (298)
T ss_pred cceeecCCCceEEEEeecCCCCCCcEEEEecCchHHHHHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCcC-CchhHHHH
Confidence 3445667899999887642 2 579999999999999999999999999999999999999997 3332 23347888
Q ss_pred HHHHHHHHHHhC----CceEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCC
Q 025885 80 VGDLIGLLDKLG----IHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFPP 130 (247)
Q Consensus 80 ~~~~~~~~~~l~----~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~~~ 130 (247)
..|+..+++... ..+++++||||||.++..++.+++.+|+++|+.++.+..
T Consensus 90 ~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l 144 (298)
T COG2267 90 VDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGL 144 (298)
T ss_pred HHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccC
Confidence 999999998874 358999999999999999999999999999998766543
No 39
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.76 E-value=2.6e-17 Score=137.08 Aligned_cols=103 Identities=20% Similarity=0.135 Sum_probs=85.5
Q ss_pred CCeEEEEcCCCCC----hhhHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH---hCCceEE
Q 025885 24 GPAVLFIHGFPEL----WYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDK---LGIHQVF 96 (247)
Q Consensus 24 ~~~vvllHG~~~~----~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~---l~~~~~~ 96 (247)
.++|||+||+++. ...|..+++.|+++||+|+++|+||||.|..+. ...+...+.+|+..+++. .+.++++
T Consensus 25 ~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~--~~~~~~~~~~Dv~~ai~~L~~~~~~~v~ 102 (266)
T TIGR03101 25 RGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDF--AAARWDVWKEDVAAAYRWLIEQGHPPVT 102 (266)
T ss_pred ceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCcc--ccCCHHHHHHHHHHHHHHHHhcCCCCEE
Confidence 4689999999864 345777889999999999999999999997654 245677788887765544 4667999
Q ss_pred EEEechhHHHHHHHHHhCCCceeEEEEecCCC
Q 025885 97 LVGHDWGALIAWYFCLFRPDRVKALVNMSVPF 128 (247)
Q Consensus 97 lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~ 128 (247)
++||||||.+++.+|.++|++++++|++++..
T Consensus 103 LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~ 134 (266)
T TIGR03101 103 LWGLRLGALLALDAANPLAAKCNRLVLWQPVV 134 (266)
T ss_pred EEEECHHHHHHHHHHHhCccccceEEEecccc
Confidence 99999999999999999999999999998654
No 40
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.73 E-value=6.2e-17 Score=163.32 Aligned_cols=123 Identities=27% Similarity=0.413 Sum_probs=101.9
Q ss_pred CceEEEEe--CCEE--EEEEeeCC---CCeEEEEcCCCCChhhHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCC------
Q 025885 4 IEHTTVAT--NGIN--MHVASIGT---GPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPS------ 70 (247)
Q Consensus 4 ~~~~~~~~--~g~~--~~~~~~g~---~~~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~------ 70 (247)
.+.+.+.+ ++.+ ++|...|+ +++|||+||++++...|..++..|.+ +|+|+++|+||||.|+.+..
T Consensus 1344 l~~~~~~v~~~~~~~~i~~~~~G~~~~~~~vVllHG~~~s~~~w~~~~~~L~~-~~rVi~~Dl~G~G~S~~~~~~~~~~~ 1422 (1655)
T PLN02980 1344 VRTYELRVDVDGFSCLIKVHEVGQNAEGSVVLFLHGFLGTGEDWIPIMKAISG-SARCISIDLPGHGGSKIQNHAKETQT 1422 (1655)
T ss_pred CceEEEEEccCceEEEEEEEecCCCCCCCeEEEECCCCCCHHHHHHHHHHHhC-CCEEEEEcCCCCCCCCCccccccccc
Confidence 33444444 3433 44556664 68999999999999999999999976 59999999999999875431
Q ss_pred CCCCCHHHHHHHHHHHHHHhCCceEEEEEechhHHHHHHHHHhCCCceeEEEEecCC
Q 025885 71 VTSYTALHLVGDLIGLLDKLGIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVP 127 (247)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~ 127 (247)
...++.+.+++++.+++++++.++++|+||||||.+++.++.++|++|+++|++++.
T Consensus 1423 ~~~~si~~~a~~l~~ll~~l~~~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~ 1479 (1655)
T PLN02980 1423 EPTLSVELVADLLYKLIEHITPGKVTLVGYSMGARIALYMALRFSDKIEGAVIISGS 1479 (1655)
T ss_pred cccCCHHHHHHHHHHHHHHhCCCCEEEEEECHHHHHHHHHHHhChHhhCEEEEECCC
Confidence 135678999999999999999999999999999999999999999999999999754
No 41
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.72 E-value=2.8e-17 Score=140.95 Aligned_cols=106 Identities=33% Similarity=0.537 Sum_probs=92.6
Q ss_pred CCCeEEEEcCCCCChhhHHHHHHHHHHC-CCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEec
Q 025885 23 TGPAVLFIHGFPELWYSWRNQLLYLSSR-GYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVFLVGHD 101 (247)
Q Consensus 23 ~~~~vvllHG~~~~~~~~~~~~~~l~~~-g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~lvGhS 101 (247)
++++||++|||.++...|+.+++.|.+. |++|+++|++|+|.++..+....|+...+...+..++...+.+++++||||
T Consensus 57 ~~~pvlllHGF~~~~~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~~~~~y~~~~~v~~i~~~~~~~~~~~~~lvghS 136 (326)
T KOG1454|consen 57 DKPPVLLLHGFGASSFSWRRVVPLLSKAKGLRVLAIDLPGHGYSSPLPRGPLYTLRELVELIRRFVKEVFVEPVSLVGHS 136 (326)
T ss_pred CCCcEEEeccccCCcccHhhhccccccccceEEEEEecCCCCcCCCCCCCCceehhHHHHHHHHHHHhhcCcceEEEEeC
Confidence 4799999999999999999999999876 499999999999944443333568999999999999999999999999999
Q ss_pred hhHHHHHHHHHhCCCceeEEE---EecCCC
Q 025885 102 WGALIAWYFCLFRPDRVKALV---NMSVPF 128 (247)
Q Consensus 102 ~Gg~~a~~~a~~~p~~v~~lv---~~~~~~ 128 (247)
+||.+|..+|+.+|+.|+++| +++++.
T Consensus 137 ~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~ 166 (326)
T KOG1454|consen 137 LGGIVALKAAAYYPETVDSLVLLDLLGPPV 166 (326)
T ss_pred cHHHHHHHHHHhCcccccceeeeccccccc
Confidence 999999999999999999999 554443
No 42
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.72 E-value=1.5e-16 Score=140.08 Aligned_cols=115 Identities=22% Similarity=0.249 Sum_probs=93.8
Q ss_pred CCEEEEEEeeCC-----CCeEEEEcCCCCChhhHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q 025885 12 NGINMHVASIGT-----GPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGL 86 (247)
Q Consensus 12 ~g~~~~~~~~g~-----~~~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~ 86 (247)
++..+++..+.+ .++|||+||++++...|..+++.|+++||+|+++|+||||.|+.... ...+.+.+.+|+.++
T Consensus 119 ~~~~l~~~~~~p~~~~~~~~Vl~lHG~~~~~~~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~~-~~~~~~~~~~Dl~~~ 197 (395)
T PLN02652 119 RRNALFCRSWAPAAGEMRGILIIIHGLNEHSGRYLHFAKQLTSCGFGVYAMDWIGHGGSDGLHG-YVPSLDYVVEDTEAF 197 (395)
T ss_pred CCCEEEEEEecCCCCCCceEEEEECCchHHHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCC-CCcCHHHHHHHHHHH
Confidence 566777765532 36899999999999999999999999999999999999999986532 244677888999999
Q ss_pred HHHhCC----ceEEEEEechhHHHHHHHHHhCCC---ceeEEEEecCCC
Q 025885 87 LDKLGI----HQVFLVGHDWGALIAWYFCLFRPD---RVKALVNMSVPF 128 (247)
Q Consensus 87 ~~~l~~----~~~~lvGhS~Gg~~a~~~a~~~p~---~v~~lv~~~~~~ 128 (247)
++.+.. .+++++||||||.++..++. +|+ +++++|+.++..
T Consensus 198 l~~l~~~~~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l 245 (395)
T PLN02652 198 LEKIRSENPGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPAL 245 (395)
T ss_pred HHHHHHhCCCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECccc
Confidence 888743 37999999999999997764 564 799999987653
No 43
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.72 E-value=7.3e-17 Score=126.98 Aligned_cols=103 Identities=27% Similarity=0.362 Sum_probs=91.5
Q ss_pred CCeEEEEcCCCCChhhHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---CCceEEEEEe
Q 025885 24 GPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKL---GIHQVFLVGH 100 (247)
Q Consensus 24 ~~~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~l---~~~~~~lvGh 100 (247)
+..|||+|||.|+..+.+.+.+.|.++||.|.+|.+||||.... +.-.++.++|.+++.+..++| +.+.|.++|.
T Consensus 15 ~~AVLllHGFTGt~~Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~e--~fl~t~~~DW~~~v~d~Y~~L~~~gy~eI~v~Gl 92 (243)
T COG1647 15 NRAVLLLHGFTGTPRDVRMLGRYLNENGYTVYAPRYPGHGTLPE--DFLKTTPRDWWEDVEDGYRDLKEAGYDEIAVVGL 92 (243)
T ss_pred CEEEEEEeccCCCcHHHHHHHHHHHHCCceEecCCCCCCCCCHH--HHhcCCHHHHHHHHHHHHHHHHHcCCCeEEEEee
Confidence 38999999999999999999999999999999999999997642 224678889988888777766 6789999999
Q ss_pred chhHHHHHHHHHhCCCceeEEEEecCCCCC
Q 025885 101 DWGALIAWYFCLFRPDRVKALVNMSVPFPP 130 (247)
Q Consensus 101 S~Gg~~a~~~a~~~p~~v~~lv~~~~~~~~ 130 (247)
||||.+++.+|..+| ++++|.+|+|...
T Consensus 93 SmGGv~alkla~~~p--~K~iv~m~a~~~~ 120 (243)
T COG1647 93 SMGGVFALKLAYHYP--PKKIVPMCAPVNV 120 (243)
T ss_pred cchhHHHHHHHhhCC--ccceeeecCCccc
Confidence 999999999999999 9999999988754
No 44
>PLN02511 hydrolase
Probab=99.70 E-value=2.2e-16 Score=138.94 Aligned_cols=105 Identities=21% Similarity=0.390 Sum_probs=83.4
Q ss_pred CCCeEEEEcCCCCChhh-H-HHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC----ceEE
Q 025885 23 TGPAVLFIHGFPELWYS-W-RNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGI----HQVF 96 (247)
Q Consensus 23 ~~~~vvllHG~~~~~~~-~-~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~ 96 (247)
++|+||++||+.+++.. | ..++..+.++||+|+++|+||||.|..... .+......+|+.+++++++. .+++
T Consensus 99 ~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~~--~~~~~~~~~Dl~~~i~~l~~~~~~~~~~ 176 (388)
T PLN02511 99 DAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVTTP--QFYSASFTGDLRQVVDHVAGRYPSANLY 176 (388)
T ss_pred CCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCCCc--CEEcCCchHHHHHHHHHHHHHCCCCCEE
Confidence 46889999999877654 5 567777778899999999999999875431 22224556788888887754 5799
Q ss_pred EEEechhHHHHHHHHHhCCCc--eeEEEEecCCCC
Q 025885 97 LVGHDWGALIAWYFCLFRPDR--VKALVNMSVPFP 129 (247)
Q Consensus 97 lvGhS~Gg~~a~~~a~~~p~~--v~~lv~~~~~~~ 129 (247)
++||||||.+++.++.++|++ |.+++++++|..
T Consensus 177 lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~ 211 (388)
T PLN02511 177 AAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFD 211 (388)
T ss_pred EEEechhHHHHHHHHHhcCCCCCceEEEEECCCcC
Confidence 999999999999999999987 889888887653
No 45
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.67 E-value=5.1e-16 Score=126.04 Aligned_cols=103 Identities=29% Similarity=0.362 Sum_probs=87.9
Q ss_pred CCCeEEEEcCCCCChhhHHHHHHHHHHC-CCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---CCceEEEE
Q 025885 23 TGPAVLFIHGFPELWYSWRNQLLYLSSR-GYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKL---GIHQVFLV 98 (247)
Q Consensus 23 ~~~~vvllHG~~~~~~~~~~~~~~l~~~-g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~l---~~~~~~lv 98 (247)
+||.++++||++.+..+|..+...+... ..+|+++|+||||++...+. .+.+.+.+++|+.++++.+ ...+++||
T Consensus 73 ~gpil~l~HG~G~S~LSfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e-~dlS~eT~~KD~~~~i~~~fge~~~~iilV 151 (343)
T KOG2564|consen 73 EGPILLLLHGGGSSALSFAIFASELKSKIRCRCLALDLRGHGETKVENE-DDLSLETMSKDFGAVIKELFGELPPQIILV 151 (343)
T ss_pred CccEEEEeecCcccchhHHHHHHHHHhhcceeEEEeeccccCccccCCh-hhcCHHHHHHHHHHHHHHHhccCCCceEEE
Confidence 5899999999999999999999888764 57889999999999976553 4689999999999999987 24579999
Q ss_pred EechhHHHHHHHHHh--CCCceeEEEEecCC
Q 025885 99 GHDWGALIAWYFCLF--RPDRVKALVNMSVP 127 (247)
Q Consensus 99 GhS~Gg~~a~~~a~~--~p~~v~~lv~~~~~ 127 (247)
||||||.+|...|.. -|. +.++++++..
T Consensus 152 GHSmGGaIav~~a~~k~lps-l~Gl~viDVV 181 (343)
T KOG2564|consen 152 GHSMGGAIAVHTAASKTLPS-LAGLVVIDVV 181 (343)
T ss_pred eccccchhhhhhhhhhhchh-hhceEEEEEe
Confidence 999999999888764 466 8899988753
No 46
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.65 E-value=9.5e-15 Score=122.87 Aligned_cols=117 Identities=20% Similarity=0.215 Sum_probs=88.2
Q ss_pred EEEeCCEEEEEE-e-eC--CCCeEEEEcCCCC----ChhhHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHH
Q 025885 8 TVATNGINMHVA-S-IG--TGPAVLFIHGFPE----LWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHL 79 (247)
Q Consensus 8 ~~~~~g~~~~~~-~-~g--~~~~vvllHG~~~----~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~ 79 (247)
.+..+|.++.-. . .. ++++||++||+++ +...|..+++.|+++||+|+++|++|||.|.... .+...+
T Consensus 6 ~~~~~~~~l~g~~~~p~~~~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~----~~~~~~ 81 (274)
T TIGR03100 6 TFSCEGETLVGVLHIPGASHTTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGEN----LGFEGI 81 (274)
T ss_pred EEEcCCcEEEEEEEcCCCCCCCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC----CCHHHH
Confidence 344566665422 2 12 3578998998764 3445677789999999999999999999986432 356677
Q ss_pred HHHHHHHHHHh-----CCceEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCC
Q 025885 80 VGDLIGLLDKL-----GIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFP 129 (247)
Q Consensus 80 ~~~~~~~~~~l-----~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~~ 129 (247)
.+|+.++++.+ +.++++++|||+||.+++.+|.. +++|+++|+++++..
T Consensus 82 ~~d~~~~~~~l~~~~~g~~~i~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~~ 135 (274)
T TIGR03100 82 DADIAAAIDAFREAAPHLRRIVAWGLCDAASAALLYAPA-DLRVAGLVLLNPWVR 135 (274)
T ss_pred HHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHhhh-CCCccEEEEECCccC
Confidence 78888888776 56789999999999999999765 468999999987643
No 47
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.64 E-value=2.2e-15 Score=130.08 Aligned_cols=119 Identities=18% Similarity=0.306 Sum_probs=92.1
Q ss_pred EeCCEEEEEEeeC---CCCeEEEEcCCCCChh-hH-------------------------HHHHHHHHHCCCEEEEeCCC
Q 025885 10 ATNGINMHVASIG---TGPAVLFIHGFPELWY-SW-------------------------RNQLLYLSSRGYRAIAPDLR 60 (247)
Q Consensus 10 ~~~g~~~~~~~~g---~~~~vvllHG~~~~~~-~~-------------------------~~~~~~l~~~g~~v~~~d~~ 60 (247)
+.+|.++++..+. .+.+|+++||+.++.. .+ ..+++.|.++||+|+++|+|
T Consensus 4 ~~~g~~l~~~~~~~~~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~~~D~r 83 (332)
T TIGR01607 4 NKDGLLLKTYSWIVKNAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVYGLDLQ 83 (332)
T ss_pred CCCCCeEEEeeeeccCCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEEEeccc
Confidence 3478888887653 3458999999998875 21 35789999999999999999
Q ss_pred CCCCCCCCCCCCC--CCHHHHHHHHHHHHHHhC------------------------CceEEEEEechhHHHHHHHHHhC
Q 025885 61 GYGDTDAPPSVTS--YTALHLVGDLIGLLDKLG------------------------IHQVFLVGHDWGALIAWYFCLFR 114 (247)
Q Consensus 61 G~G~s~~~~~~~~--~~~~~~~~~~~~~~~~l~------------------------~~~~~lvGhS~Gg~~a~~~a~~~ 114 (247)
|||.|........ .+++++++|+.++++... ..+++|+||||||.++..++..+
T Consensus 84 GHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~~~~ 163 (332)
T TIGR01607 84 GHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLLELL 163 (332)
T ss_pred ccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHHHHHh
Confidence 9999875422111 378889999998887642 23699999999999999998765
Q ss_pred CC--------ceeEEEEecCCC
Q 025885 115 PD--------RVKALVNMSVPF 128 (247)
Q Consensus 115 p~--------~v~~lv~~~~~~ 128 (247)
++ .++++|+++++.
T Consensus 164 ~~~~~~~~~~~i~g~i~~s~~~ 185 (332)
T TIGR01607 164 GKSNENNDKLNIKGCISLSGMI 185 (332)
T ss_pred ccccccccccccceEEEeccce
Confidence 42 588999888764
No 48
>PRK10985 putative hydrolase; Provisional
Probab=99.63 E-value=1.4e-14 Score=124.66 Aligned_cols=105 Identities=20% Similarity=0.197 Sum_probs=76.8
Q ss_pred CCeEEEEcCCCCChhh--HHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCC---CHHHHHHHHHHHHHHhCCceEEEE
Q 025885 24 GPAVLFIHGFPELWYS--WRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSY---TALHLVGDLIGLLDKLGIHQVFLV 98 (247)
Q Consensus 24 ~~~vvllHG~~~~~~~--~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~lv 98 (247)
+|+||++||++++... +..++..|.++||+|+++|+||||.+..... ..+ ...++...+..+.+.++..+++++
T Consensus 58 ~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~-~~~~~~~~~D~~~~i~~l~~~~~~~~~~~v 136 (324)
T PRK10985 58 KPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLH-RIYHSGETEDARFFLRWLQREFGHVPTAAV 136 (324)
T ss_pred CCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCCc-ceECCCchHHHHHHHHHHHHhCCCCCEEEE
Confidence 5899999999987544 4568899999999999999999997643211 112 223332223333344566789999
Q ss_pred EechhHHHHHHHHHhCCCc--eeEEEEecCCCC
Q 025885 99 GHDWGALIAWYFCLFRPDR--VKALVNMSVPFP 129 (247)
Q Consensus 99 GhS~Gg~~a~~~a~~~p~~--v~~lv~~~~~~~ 129 (247)
||||||.++..++..+++. +.++|++++|+.
T Consensus 137 G~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~ 169 (324)
T PRK10985 137 GYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLM 169 (324)
T ss_pred EecchHHHHHHHHHhhCCCCCccEEEEEcCCCC
Confidence 9999999888888776544 899999998764
No 49
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.62 E-value=7.1e-15 Score=129.55 Aligned_cols=105 Identities=18% Similarity=0.203 Sum_probs=81.5
Q ss_pred CCCeEEEEcCCCCCh--hhHHH-HHHHHHH--CCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh------C
Q 025885 23 TGPAVLFIHGFPELW--YSWRN-QLLYLSS--RGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKL------G 91 (247)
Q Consensus 23 ~~~~vvllHG~~~~~--~~~~~-~~~~l~~--~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~l------~ 91 (247)
++|++|++|||.++. ..|.. +...|.. ..++|+++|++|+|.+..+.. ......+++++.++++.+ +
T Consensus 40 ~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a--~~~t~~vg~~la~lI~~L~~~~gl~ 117 (442)
T TIGR03230 40 ETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTS--AAYTKLVGKDVAKFVNWMQEEFNYP 117 (442)
T ss_pred CCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCccc--cccHHHHHHHHHHHHHHHHHhhCCC
Confidence 479999999998754 45765 5555542 259999999999998865532 223355666777777754 3
Q ss_pred CceEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCC
Q 025885 92 IHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFP 129 (247)
Q Consensus 92 ~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~~ 129 (247)
+++++||||||||.+|..++.+.|++|.+++.+++..+
T Consensus 118 l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAgP 155 (442)
T TIGR03230 118 WDNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAGP 155 (442)
T ss_pred CCcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCCC
Confidence 67999999999999999999999999999999997643
No 50
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.62 E-value=1.6e-14 Score=128.10 Aligned_cols=103 Identities=22% Similarity=0.270 Sum_probs=78.8
Q ss_pred CCeEEEEcCCCCCh-hhHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---CCceEEEEE
Q 025885 24 GPAVLFIHGFPELW-YSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKL---GIHQVFLVG 99 (247)
Q Consensus 24 ~~~vvllHG~~~~~-~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~l---~~~~~~lvG 99 (247)
.|+||++||+.+.. ..|..++..|+++||+|+++|+||+|.|.... ...+......++.+.+... +.+++.++|
T Consensus 194 ~P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~--~~~d~~~~~~avld~l~~~~~vd~~ri~l~G 271 (414)
T PRK05077 194 FPTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWK--LTQDSSLLHQAVLNALPNVPWVDHTRVAAFG 271 (414)
T ss_pred ccEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCC--ccccHHHHHHHHHHHHHhCcccCcccEEEEE
Confidence 45666666665543 56888899999999999999999999986532 1223333444555555554 457899999
Q ss_pred echhHHHHHHHHHhCCCceeEEEEecCCC
Q 025885 100 HDWGALIAWYFCLFRPDRVKALVNMSVPF 128 (247)
Q Consensus 100 hS~Gg~~a~~~a~~~p~~v~~lv~~~~~~ 128 (247)
||+||.+++.+|..+|++|+++|+++++.
T Consensus 272 ~S~GG~~Al~~A~~~p~ri~a~V~~~~~~ 300 (414)
T PRK05077 272 FRFGANVAVRLAYLEPPRLKAVACLGPVV 300 (414)
T ss_pred EChHHHHHHHHHHhCCcCceEEEEECCcc
Confidence 99999999999999999999999998765
No 51
>PRK10566 esterase; Provisional
Probab=99.62 E-value=1.1e-14 Score=120.35 Aligned_cols=110 Identities=20% Similarity=0.212 Sum_probs=77.7
Q ss_pred EEEEEeeC----CCCeEEEEcCCCCChhhHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCC-----HHHHHHHHHH
Q 025885 15 NMHVASIG----TGPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYT-----ALHLVGDLIG 85 (247)
Q Consensus 15 ~~~~~~~g----~~~~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~-----~~~~~~~~~~ 85 (247)
.++|...+ +.|+||++||++++...|..+...|+++||.|+++|+||+|.+.......... .....+|+.+
T Consensus 14 ~~~~~p~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (249)
T PRK10566 14 VLHAFPAGQRDTPLPTVFFYHGFTSSKLVYSYFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQEFPT 93 (249)
T ss_pred eEEEcCCCCCCCCCCEEEEeCCCCcccchHHHHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHHHHHHHHHHHHH
Confidence 36666643 24799999999999999999999999999999999999999763221101110 1122344444
Q ss_pred HHHHh------CCceEEEEEechhHHHHHHHHHhCCCceeEEEEe
Q 025885 86 LLDKL------GIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNM 124 (247)
Q Consensus 86 ~~~~l------~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~ 124 (247)
+++.+ +.++++++|||+||.+++.++.++|+....++++
T Consensus 94 ~~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~ 138 (249)
T PRK10566 94 LRAAIREEGWLLDDRLAVGGASMGGMTALGIMARHPWVKCVASLM 138 (249)
T ss_pred HHHHHHhcCCcCccceeEEeecccHHHHHHHHHhCCCeeEEEEee
Confidence 44443 3468999999999999999999988643344443
No 52
>PRK11071 esterase YqiA; Provisional
Probab=99.61 E-value=5.3e-15 Score=117.77 Aligned_cols=89 Identities=21% Similarity=0.210 Sum_probs=74.6
Q ss_pred CeEEEEcCCCCChhhHHH--HHHHHHH--CCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEe
Q 025885 25 PAVLFIHGFPELWYSWRN--QLLYLSS--RGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVFLVGH 100 (247)
Q Consensus 25 ~~vvllHG~~~~~~~~~~--~~~~l~~--~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~lvGh 100 (247)
|+|||+||++++..+|+. +.+.+.+ .+|+|+++|+||++ ++.++++.++++.++.++++++||
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~-------------~~~~~~l~~l~~~~~~~~~~lvG~ 68 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP-------------ADAAELLESLVLEHGGDPLGLVGS 68 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH-------------HHHHHHHHHHHHHcCCCCeEEEEE
Confidence 689999999999999984 3456654 37999999999984 346788999999999999999999
Q ss_pred chhHHHHHHHHHhCCCceeEEEEecCCCC
Q 025885 101 DWGALIAWYFCLFRPDRVKALVNMSVPFP 129 (247)
Q Consensus 101 S~Gg~~a~~~a~~~p~~v~~lv~~~~~~~ 129 (247)
|+||.+++.+|.++|. .+|+++++..
T Consensus 69 S~Gg~~a~~~a~~~~~---~~vl~~~~~~ 94 (190)
T PRK11071 69 SLGGYYATWLSQCFML---PAVVVNPAVR 94 (190)
T ss_pred CHHHHHHHHHHHHcCC---CEEEECCCCC
Confidence 9999999999999993 3577776543
No 53
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.61 E-value=1.5e-14 Score=119.30 Aligned_cols=118 Identities=20% Similarity=0.285 Sum_probs=96.7
Q ss_pred EeCCEEEEEEeeCC------CCeEEEEcCCCCCh-hhHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHH
Q 025885 10 ATNGINMHVASIGT------GPAVLFIHGFPELW-YSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGD 82 (247)
Q Consensus 10 ~~~g~~~~~~~~g~------~~~vvllHG~~~~~-~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~ 82 (247)
+.+|.++....+-+ .-.|+++||+++.. ..+...+..|+..||.|++.|++|||.|+.... .-.+.+.+++|
T Consensus 34 n~rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl~~-yi~~~d~~v~D 112 (313)
T KOG1455|consen 34 NPRGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRYQSTAKRLAKSGFAVYAIDYEGHGRSDGLHA-YVPSFDLVVDD 112 (313)
T ss_pred cCCCCEeEEEecccCCCCCCceEEEEEcCCcccchhhHHHHHHHHHhCCCeEEEeeccCCCcCCCCcc-cCCcHHHHHHH
Confidence 44687887765432 23689999998875 778889999999999999999999999986543 34578888999
Q ss_pred HHHHHHHh------CCceEEEEEechhHHHHHHHHHhCCCceeEEEEecCCC
Q 025885 83 LIGLLDKL------GIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPF 128 (247)
Q Consensus 83 ~~~~~~~l------~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~ 128 (247)
+....+.. ...+.+|.||||||+|++.++.++|+..+++|++++-.
T Consensus 113 ~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc 164 (313)
T KOG1455|consen 113 VISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMC 164 (313)
T ss_pred HHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeeccc
Confidence 98888864 12368999999999999999999999999999987654
No 54
>PRK13604 luxD acyl transferase; Provisional
Probab=99.58 E-value=3.7e-14 Score=119.33 Aligned_cols=114 Identities=22% Similarity=0.222 Sum_probs=85.9
Q ss_pred eCCEEEEEEeeCC-------CCeEEEEcCCCCChhhHHHHHHHHHHCCCEEEEeCCCCC-CCCCCCCCCCCCCHHHHHHH
Q 025885 11 TNGINMHVASIGT-------GPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGY-GDTDAPPSVTSYTALHLVGD 82 (247)
Q Consensus 11 ~~g~~~~~~~~g~-------~~~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~-G~s~~~~~~~~~~~~~~~~~ 82 (247)
.+|.++.-+..-+ .++||++||+.++...+..+++.|+++||.|+.+|.+|+ |.|+... ...+......|
T Consensus 17 ~dG~~L~Gwl~~P~~~~~~~~~~vIi~HGf~~~~~~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~--~~~t~s~g~~D 94 (307)
T PRK13604 17 ENGQSIRVWETLPKENSPKKNNTILIASGFARRMDHFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTI--DEFTMSIGKNS 94 (307)
T ss_pred CCCCEEEEEEEcCcccCCCCCCEEEEeCCCCCChHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCcc--ccCcccccHHH
Confidence 3788887664322 378999999999887789999999999999999999987 8886543 22333334567
Q ss_pred HHHHHHHh---CCceEEEEEechhHHHHHHHHHhCCCceeEEEEecCCC
Q 025885 83 LIGLLDKL---GIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPF 128 (247)
Q Consensus 83 ~~~~~~~l---~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~ 128 (247)
+.++++.+ +.+++.|+||||||.++...|... +++++|+.++..
T Consensus 95 l~aaid~lk~~~~~~I~LiG~SmGgava~~~A~~~--~v~~lI~~sp~~ 141 (307)
T PRK13604 95 LLTVVDWLNTRGINNLGLIAASLSARIAYEVINEI--DLSFLITAVGVV 141 (307)
T ss_pred HHHHHHHHHhcCCCceEEEEECHHHHHHHHHhcCC--CCCEEEEcCCcc
Confidence 76555555 556899999999999997777643 388888876543
No 55
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.58 E-value=1.1e-14 Score=127.81 Aligned_cols=117 Identities=20% Similarity=0.294 Sum_probs=93.9
Q ss_pred CCEEEEEEeeCC-----CCeEEEEcCCCCChhh-------------HHHHHH---HHHHCCCEEEEeCCCCCCCCCCC--
Q 025885 12 NGINMHVASIGT-----GPAVLFIHGFPELWYS-------------WRNQLL---YLSSRGYRAIAPDLRGYGDTDAP-- 68 (247)
Q Consensus 12 ~g~~~~~~~~g~-----~~~vvllHG~~~~~~~-------------~~~~~~---~l~~~g~~v~~~d~~G~G~s~~~-- 68 (247)
+..+++|...|. .+.||++|++.++++. |..++- .|....|.||++|..|-|.|+.|
T Consensus 39 ~~~~~~Y~t~G~ln~~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~ 118 (389)
T PRK06765 39 PDVQMGYETYGTLNRAKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNV 118 (389)
T ss_pred CCceEEEEeccccCCCCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCC
Confidence 467899999884 4789999999986532 666653 35555799999999987653221
Q ss_pred ----------C-------CCCCCCHHHHHHHHHHHHHHhCCceEE-EEEechhHHHHHHHHHhCCCceeEEEEecCCC
Q 025885 69 ----------P-------SVTSYTALHLVGDLIGLLDKLGIHQVF-LVGHDWGALIAWYFCLFRPDRVKALVNMSVPF 128 (247)
Q Consensus 69 ----------~-------~~~~~~~~~~~~~~~~~~~~l~~~~~~-lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~ 128 (247)
. +...++..++++++.+++++++++++. ++||||||++++.+|.++|++|+++|++++..
T Consensus 119 g~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~lgi~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia~~~ 196 (389)
T PRK06765 119 ITTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSLGIARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVIGNP 196 (389)
T ss_pred CCCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEecCC
Confidence 1 112378999999999999999999986 99999999999999999999999999997653
No 56
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.58 E-value=9.9e-15 Score=122.66 Aligned_cols=105 Identities=23% Similarity=0.336 Sum_probs=78.0
Q ss_pred CCCeEEEEcCCCCCh-hhHHHHH-HHH-HHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh------CCc
Q 025885 23 TGPAVLFIHGFPELW-YSWRNQL-LYL-SSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKL------GIH 93 (247)
Q Consensus 23 ~~~~vvllHG~~~~~-~~~~~~~-~~l-~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~l------~~~ 93 (247)
++|++|++|||.++. ..|...+ ..+ ...+++|+++|+++++.+..+. ...+...+.+++..+++.+ +.+
T Consensus 35 ~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~~--a~~~~~~v~~~la~~l~~L~~~~g~~~~ 112 (275)
T cd00707 35 SRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYPQ--AVNNTRVVGAELAKFLDFLVDNTGLSLE 112 (275)
T ss_pred CCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChHH--HHHhHHHHHHHHHHHHHHHHHhcCCChH
Confidence 468999999999987 6776554 334 4457999999999984332221 1233444555565555554 346
Q ss_pred eEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCC
Q 025885 94 QVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFP 129 (247)
Q Consensus 94 ~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~~ 129 (247)
++++||||+||.+|..++.++|++|++++.++++.+
T Consensus 113 ~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p 148 (275)
T cd00707 113 NVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGP 148 (275)
T ss_pred HEEEEEecHHHHHHHHHHHHhcCccceeEEecCCcc
Confidence 899999999999999999999999999999987643
No 57
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.57 E-value=1.6e-14 Score=125.65 Aligned_cols=113 Identities=18% Similarity=0.142 Sum_probs=86.8
Q ss_pred CCEEEEEEeeC----CCCeEEEEcCCCCChhh-----HHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHH--
Q 025885 12 NGINMHVASIG----TGPAVLFIHGFPELWYS-----WRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLV-- 80 (247)
Q Consensus 12 ~g~~~~~~~~g----~~~~vvllHG~~~~~~~-----~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~-- 80 (247)
++..++..... .+++||++||+..+.+. ++.+++.|.++||+|+++|++|+|.|.... +..++.
T Consensus 46 ~~~~l~~~~~~~~~~~~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~~~-----~~~d~~~~ 120 (350)
T TIGR01836 46 DKVVLYRYTPVKDNTHKTPLLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADRYL-----TLDDYING 120 (350)
T ss_pred CcEEEEEecCCCCcCCCCcEEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHhcC-----CHHHHHHH
Confidence 45565544322 24689999998665554 478999999999999999999998775432 344443
Q ss_pred ---HHHHHHHHHhCCceEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCC
Q 025885 81 ---GDLIGLLDKLGIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFP 129 (247)
Q Consensus 81 ---~~~~~~~~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~~ 129 (247)
+.+..+++..+.++++++||||||.++..+++.+|++|+++|++++|..
T Consensus 121 ~~~~~v~~l~~~~~~~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~ 172 (350)
T TIGR01836 121 YIDKCVDYICRTSKLDQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVD 172 (350)
T ss_pred HHHHHHHHHHHHhCCCcccEEEECHHHHHHHHHHHhCchheeeEEEeccccc
Confidence 3344455556788999999999999999999999999999999998765
No 58
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.57 E-value=6.1e-14 Score=113.76 Aligned_cols=116 Identities=41% Similarity=0.735 Sum_probs=93.9
Q ss_pred EeCCEEEEEEeeCC-CCeEEEEcCCCCChhhHHHHHHHHHHCC--CEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q 025885 10 ATNGINMHVASIGT-GPAVLFIHGFPELWYSWRNQLLYLSSRG--YRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGL 86 (247)
Q Consensus 10 ~~~g~~~~~~~~g~-~~~vvllHG~~~~~~~~~~~~~~l~~~g--~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~ 86 (247)
...+..+.|...+. +|+++++||++++...|......+.... |+++++|+||||.|. .. .+.....++++..+
T Consensus 6 ~~~~~~~~~~~~~~~~~~i~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~g~s~-~~---~~~~~~~~~~~~~~ 81 (282)
T COG0596 6 AADGVRLAYREAGGGGPPLVLLHGFPGSSSVWRPVFKVLPALAARYRVIAPDLRGHGRSD-PA---GYSLSAYADDLAAL 81 (282)
T ss_pred cCCCeEEEEeecCCCCCeEEEeCCCCCchhhhHHHHHHhhccccceEEEEecccCCCCCC-cc---cccHHHHHHHHHHH
Confidence 34566677776654 6799999999999999988444443321 899999999999997 11 33445558899999
Q ss_pred HHHhCCceEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCC
Q 025885 87 LDKLGIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFP 129 (247)
Q Consensus 87 ~~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~~ 129 (247)
++.++..+++++||||||.++..++.++|++++++|+++++..
T Consensus 82 ~~~~~~~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~ 124 (282)
T COG0596 82 LDALGLEKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAPP 124 (282)
T ss_pred HHHhCCCceEEEEecccHHHHHHHHHhcchhhheeeEecCCCC
Confidence 9999988999999999999999999999999999999986643
No 59
>PLN02872 triacylglycerol lipase
Probab=99.56 E-value=1.4e-14 Score=127.33 Aligned_cols=123 Identities=20% Similarity=0.320 Sum_probs=91.2
Q ss_pred ceEEEE-eCCEEEEEEeeC---------CCCeEEEEcCCCCChhhHH------HHHHHHHHCCCEEEEeCCCCCCCCCC-
Q 025885 5 EHTTVA-TNGINMHVASIG---------TGPAVLFIHGFPELWYSWR------NQLLYLSSRGYRAIAPDLRGYGDTDA- 67 (247)
Q Consensus 5 ~~~~~~-~~g~~~~~~~~g---------~~~~vvllHG~~~~~~~~~------~~~~~l~~~g~~v~~~d~~G~G~s~~- 67 (247)
+.+.++ -||..+...... ++|+|||+||+..++..|. .+...|+++||+|+++|+||++.|..
T Consensus 45 e~h~v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG~~~s~gh 124 (395)
T PLN02872 45 TEHTIQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRGTRWSYGH 124 (395)
T ss_pred eEEEEECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccceeecCcccchHHHHHhCCCCcccccccccccccCC
Confidence 445554 488888776531 2579999999999888883 34557888999999999999876532
Q ss_pred ---CC-C--CCCCCHHHHH-HHHHHHHHHh---CCceEEEEEechhHHHHHHHHHhCCC---ceeEEEEecCCC
Q 025885 68 ---PP-S--VTSYTALHLV-GDLIGLLDKL---GIHQVFLVGHDWGALIAWYFCLFRPD---RVKALVNMSVPF 128 (247)
Q Consensus 68 ---~~-~--~~~~~~~~~~-~~~~~~~~~l---~~~~~~lvGhS~Gg~~a~~~a~~~p~---~v~~lv~~~~~~ 128 (247)
.. . .-.+++.+++ .|+.++++++ ..+++++|||||||.+++.++ .+|+ +|+.++++++..
T Consensus 125 ~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~~~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~P~~ 197 (395)
T PLN02872 125 VTLSEKDKEFWDWSWQELALYDLAEMIHYVYSITNSKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALLCPIS 197 (395)
T ss_pred CCCCccchhccCCcHHHHHHHHHHHHHHHHHhccCCceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHhcchh
Confidence 11 1 1146777888 7999999986 347899999999999998555 5776 577878777653
No 60
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.53 E-value=3.2e-14 Score=115.10 Aligned_cols=76 Identities=39% Similarity=0.657 Sum_probs=69.9
Q ss_pred CEEEEeCCCCCCCCCC--CCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEechhHHHHHHHHHhCCCceeEEEEecCC
Q 025885 52 YRAIAPDLRGYGDTDA--PPSVTSYTALHLVGDLIGLLDKLGIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVP 127 (247)
Q Consensus 52 ~~v~~~d~~G~G~s~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~ 127 (247)
|+|+++|+||+|.|+. ......++..++++++..+++.++.++++++||||||.+++.+|+.+|++|+++|+++++
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~~~~ 78 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYPERVKKLVLISPP 78 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESES
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCchhhcCcEEEeee
Confidence 6899999999999984 144468899999999999999999999999999999999999999999999999999875
No 61
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.52 E-value=1e-13 Score=104.79 Aligned_cols=93 Identities=27% Similarity=0.406 Sum_probs=75.3
Q ss_pred eEEEEcCCCCChhhHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEechhHH
Q 025885 26 AVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVFLVGHDWGAL 105 (247)
Q Consensus 26 ~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~lvGhS~Gg~ 105 (247)
+||++||+.++...|..+.+.|+++||.|+.+|+|++|.+.... ...++.+++. ....+.++++++|||+||.
T Consensus 1 ~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~-----~~~~~~~~~~--~~~~~~~~i~l~G~S~Gg~ 73 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQPLAEALAEQGYAVVAFDYPGHGDSDGAD-----AVERVLADIR--AGYPDPDRIILIGHSMGGA 73 (145)
T ss_dssp EEEEECTTTTTTHHHHHHHHHHHHTTEEEEEESCTTSTTSHHSH-----HHHHHHHHHH--HHHCTCCEEEEEEETHHHH
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEecCCCCccchhH-----HHHHHHHHHH--hhcCCCCcEEEEEEccCcH
Confidence 68999999999999999999999999999999999999872211 2223222222 1123668999999999999
Q ss_pred HHHHHHHhCCCceeEEEEecC
Q 025885 106 IAWYFCLFRPDRVKALVNMSV 126 (247)
Q Consensus 106 ~a~~~a~~~p~~v~~lv~~~~ 126 (247)
+++.++.+. .+++++|++++
T Consensus 74 ~a~~~~~~~-~~v~~~v~~~~ 93 (145)
T PF12695_consen 74 IAANLAARN-PRVKAVVLLSP 93 (145)
T ss_dssp HHHHHHHHS-TTESEEEEESE
T ss_pred HHHHHhhhc-cceeEEEEecC
Confidence 999999998 68999999987
No 62
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.52 E-value=4.4e-14 Score=118.85 Aligned_cols=118 Identities=26% Similarity=0.521 Sum_probs=102.4
Q ss_pred ceEEEEeCCEEEEEEeeCC-------C-CeEEEEcCCCCChhhHHHHHHHHHHC---------CCEEEEeCCCCCCCCCC
Q 025885 5 EHTTVATNGINMHVASIGT-------G-PAVLFIHGFPELWYSWRNQLLYLSSR---------GYRAIAPDLRGYGDTDA 67 (247)
Q Consensus 5 ~~~~~~~~g~~~~~~~~g~-------~-~~vvllHG~~~~~~~~~~~~~~l~~~---------g~~v~~~d~~G~G~s~~ 67 (247)
.+..-++.|.++|+..... . .|+|++|||||+-.++-.+++.|.+. -|.||+|.+||||.|+.
T Consensus 125 ~qykTeIeGL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv~EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~ 204 (469)
T KOG2565|consen 125 KQYKTEIEGLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSVREFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDA 204 (469)
T ss_pred hhhhhhhcceeEEEEEecCCccccCCcccceEEecCCCchHHHHHhhhhhhcCccccCCccceeEEEeccCCCCcccCcC
Confidence 4455678999999986431 1 48999999999999999999988754 27899999999999998
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEechhHHHHHHHHHhCCCceeEEEE
Q 025885 68 PPSVTSYTALHLVGDLIGLLDKLGIHQVFLVGHDWGALIAWYFCLFRPDRVKALVN 123 (247)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~ 123 (247)
+.. ..++..+.+.-+..++-.+|.+++.+-|-+||+.|+..+|..+|++|.++-+
T Consensus 205 ~sk-~GFn~~a~ArvmrkLMlRLg~nkffiqGgDwGSiI~snlasLyPenV~GlHl 259 (469)
T KOG2565|consen 205 PSK-TGFNAAATARVMRKLMLRLGYNKFFIQGGDWGSIIGSNLASLYPENVLGLHL 259 (469)
T ss_pred Ccc-CCccHHHHHHHHHHHHHHhCcceeEeecCchHHHHHHHHHhhcchhhhHhhh
Confidence 864 5788889999999999999999999999999999999999999999988853
No 63
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.51 E-value=9.6e-13 Score=107.92 Aligned_cols=109 Identities=28% Similarity=0.408 Sum_probs=96.0
Q ss_pred eEEEEcCCCCChhhHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCc-eEEEEEechhH
Q 025885 26 AVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIH-QVFLVGHDWGA 104 (247)
Q Consensus 26 ~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~lvGhS~Gg 104 (247)
+||=+||-||+..+++.+.+.|.+.|.|+|.+++||+|.+..+.+ ..|+-.+-..-+.++++.++++ +++++|||.|+
T Consensus 37 TVv~~hGsPGSH~DFkYi~~~l~~~~iR~I~iN~PGf~~t~~~~~-~~~~n~er~~~~~~ll~~l~i~~~~i~~gHSrGc 115 (297)
T PF06342_consen 37 TVVAFHGSPGSHNDFKYIRPPLDEAGIRFIGINYPGFGFTPGYPD-QQYTNEERQNFVNALLDELGIKGKLIFLGHSRGC 115 (297)
T ss_pred eEEEecCCCCCccchhhhhhHHHHcCeEEEEeCCCCCCCCCCCcc-cccChHHHHHHHHHHHHHcCCCCceEEEEeccch
Confidence 799999999999999999999999999999999999999988765 4677778888999999999986 68999999999
Q ss_pred HHHHHHHHhCCCceeEEEEecCCCCCCCCCCCc
Q 025885 105 LIAWYFCLFRPDRVKALVNMSVPFPPRNPAVRP 137 (247)
Q Consensus 105 ~~a~~~a~~~p~~v~~lv~~~~~~~~~~~~~~~ 137 (247)
-.|+.+|..+| +.++++++++........++
T Consensus 116 enal~la~~~~--~~g~~lin~~G~r~HkgIrp 146 (297)
T PF06342_consen 116 ENALQLAVTHP--LHGLVLINPPGLRPHKGIRP 146 (297)
T ss_pred HHHHHHHhcCc--cceEEEecCCccccccCcCH
Confidence 99999999997 67999999886644433444
No 64
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.51 E-value=1.4e-13 Score=124.62 Aligned_cols=108 Identities=16% Similarity=0.175 Sum_probs=89.5
Q ss_pred CCCeEEEEcCCCCChhhHH-----HHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEE
Q 025885 23 TGPAVLFIHGFPELWYSWR-----NQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVFL 97 (247)
Q Consensus 23 ~~~~vvllHG~~~~~~~~~-----~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 97 (247)
.++|||++||+....+.|. .++..|.++||+|+++|++|+|.+.......+|..+.+.+.+..+++.++.+++++
T Consensus 187 ~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~~~ddY~~~~i~~al~~v~~~~g~~kv~l 266 (532)
T TIGR01838 187 HKTPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADKTFDDYIRDGVIAALEVVEAITGEKQVNC 266 (532)
T ss_pred CCCcEEEECcccccceeeecccchHHHHHHHHCCcEEEEEECCCCCcccccCChhhhHHHHHHHHHHHHHHhcCCCCeEE
Confidence 3689999999988888874 79999999999999999999998866544446666677788888888889999999
Q ss_pred EEechhHHHHH----HHHHhC-CCceeEEEEecCCCCC
Q 025885 98 VGHDWGALIAW----YFCLFR-PDRVKALVNMSVPFPP 130 (247)
Q Consensus 98 vGhS~Gg~~a~----~~a~~~-p~~v~~lv~~~~~~~~ 130 (247)
+||||||.++. .+++.+ |++|+++++++++...
T Consensus 267 vG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df 304 (532)
T TIGR01838 267 VGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDF 304 (532)
T ss_pred EEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCC
Confidence 99999999852 345555 7899999999987553
No 65
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.49 E-value=3.7e-13 Score=125.63 Aligned_cols=109 Identities=24% Similarity=0.260 Sum_probs=85.4
Q ss_pred EEEEeCCEEEEEEeeCCC-----------CeEEEEcCCCCChhhHHHHHHHHHHCCCEEEEeCCCCCCCCCCC-------
Q 025885 7 TTVATNGINMHVASIGTG-----------PAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAP------- 68 (247)
Q Consensus 7 ~~~~~~g~~~~~~~~g~~-----------~~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~------- 68 (247)
.+...++.++.|...|.| |+|||+||+.++...|..+++.|+++||+|+++|+||||.|...
T Consensus 421 ~~~~p~~~~i~~~~~~~g~~~~~~p~~g~P~VVllHG~~g~~~~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~ 500 (792)
T TIGR03502 421 LLTTPNGPVIAAFRAGTGLETFAAPTDGWPVVIYQHGITGAKENALAFAGTLAAAGVATIAIDHPLHGARSFDANASGVN 500 (792)
T ss_pred EEEecCcchhhhhhcccccccccCCCCCCcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEeCCCCCCcccccccccccc
Confidence 344456666666554332 48999999999999999999999988999999999999998432
Q ss_pred ---CCCC-----------CCCHHHHHHHHHHHHHHhC----------------CceEEEEEechhHHHHHHHHHhCC
Q 025885 69 ---PSVT-----------SYTALHLVGDLIGLLDKLG----------------IHQVFLVGHDWGALIAWYFCLFRP 115 (247)
Q Consensus 69 ---~~~~-----------~~~~~~~~~~~~~~~~~l~----------------~~~~~lvGhS~Gg~~a~~~a~~~p 115 (247)
.... ..++.+.+.|+..+...++ ..+++++||||||.++..++....
T Consensus 501 a~~~~~~~y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~an 577 (792)
T TIGR03502 501 ATNANVLAYMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAYAN 577 (792)
T ss_pred ccccCccceeccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHhcC
Confidence 1111 1267888999998888876 248999999999999999987643
No 66
>PLN00021 chlorophyllase
Probab=99.48 E-value=2.8e-13 Score=115.65 Aligned_cols=104 Identities=24% Similarity=0.361 Sum_probs=75.9
Q ss_pred CCCCeEEEEcCCCCChhhHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-------hCCce
Q 025885 22 GTGPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDK-------LGIHQ 94 (247)
Q Consensus 22 g~~~~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~-------l~~~~ 94 (247)
++.|+|||+||+..+...|..+++.|++.||.|+++|++|++.+.... ...+..++.+.+.+.++. .+.++
T Consensus 50 g~~PvVv~lHG~~~~~~~y~~l~~~Las~G~~VvapD~~g~~~~~~~~--~i~d~~~~~~~l~~~l~~~l~~~~~~d~~~ 127 (313)
T PLN00021 50 GTYPVLLFLHGYLLYNSFYSQLLQHIASHGFIVVAPQLYTLAGPDGTD--EIKDAAAVINWLSSGLAAVLPEGVRPDLSK 127 (313)
T ss_pred CCCCEEEEECCCCCCcccHHHHHHHHHhCCCEEEEecCCCcCCCCchh--hHHHHHHHHHHHHhhhhhhcccccccChhh
Confidence 346899999999999999999999999999999999999875432111 001122222333332222 23468
Q ss_pred EEEEEechhHHHHHHHHHhCCC-----ceeEEEEecCC
Q 025885 95 VFLVGHDWGALIAWYFCLFRPD-----RVKALVNMSVP 127 (247)
Q Consensus 95 ~~lvGhS~Gg~~a~~~a~~~p~-----~v~~lv~~~~~ 127 (247)
++++|||+||.+++.+|..+++ ++.++|.+++.
T Consensus 128 v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv 165 (313)
T PLN00021 128 LALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPV 165 (313)
T ss_pred eEEEEECcchHHHHHHHhhccccccccceeeEEeeccc
Confidence 9999999999999999998874 58899988764
No 67
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.48 E-value=2.9e-13 Score=113.13 Aligned_cols=103 Identities=24% Similarity=0.384 Sum_probs=90.7
Q ss_pred CCCeEEEEcCCCCChhhHHHHHHHHHHC-CCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC----CceEEE
Q 025885 23 TGPAVLFIHGFPELWYSWRNQLLYLSSR-GYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLG----IHQVFL 97 (247)
Q Consensus 23 ~~~~vvllHG~~~~~~~~~~~~~~l~~~-g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~l~----~~~~~l 97 (247)
..|+++++||+-++...|+.+...|+.. +..|+++|.|.||.|.... ..+...+++|+..+++..+ ..++++
T Consensus 51 ~~Pp~i~lHGl~GS~~Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~---~h~~~~ma~dv~~Fi~~v~~~~~~~~~~l 127 (315)
T KOG2382|consen 51 RAPPAIILHGLLGSKENWRSVAKNLSRKLGRDVYAVDVRNHGSSPKIT---VHNYEAMAEDVKLFIDGVGGSTRLDPVVL 127 (315)
T ss_pred CCCceEEecccccCCCCHHHHHHHhcccccCceEEEecccCCCCcccc---ccCHHHHHHHHHHHHHHcccccccCCcee
Confidence 4799999999999999999999999864 7789999999999997654 5568899999999999984 568999
Q ss_pred EEechhH-HHHHHHHHhCCCceeEEEEecCCC
Q 025885 98 VGHDWGA-LIAWYFCLFRPDRVKALVNMSVPF 128 (247)
Q Consensus 98 vGhS~Gg-~~a~~~a~~~p~~v~~lv~~~~~~ 128 (247)
+|||||| .+++..+...|+.+..+|+++.++
T Consensus 128 ~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP 159 (315)
T KOG2382|consen 128 LGHSMGGVKVAMAETLKKPDLIERLIVEDISP 159 (315)
T ss_pred cccCcchHHHHHHHHHhcCcccceeEEEecCC
Confidence 9999999 788888889999999999987543
No 68
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.46 E-value=7.2e-14 Score=108.65 Aligned_cols=122 Identities=20% Similarity=0.304 Sum_probs=101.1
Q ss_pred CceEEEEeCCEEEEEEeeCCCC-eEEEEcCCCCC-hhhHHHHHHHHHHC-CCEEEEeCCCCCCCCCCCCCCCCCCHH---
Q 025885 4 IEHTTVATNGINMHVASIGTGP-AVLFIHGFPEL-WYSWRNQLLYLSSR-GYRAIAPDLRGYGDTDAPPSVTSYTAL--- 77 (247)
Q Consensus 4 ~~~~~~~~~g~~~~~~~~g~~~-~vvllHG~~~~-~~~~~~~~~~l~~~-g~~v~~~d~~G~G~s~~~~~~~~~~~~--- 77 (247)
.+...+.++|.+++|...|+|| .|+++.|.-++ ..+|..++..+.+. .++|+++|.||||.|..|.. .+..+
T Consensus 21 ~te~kv~vng~ql~y~~~G~G~~~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP~R--kf~~~ff~ 98 (277)
T KOG2984|consen 21 YTESKVHVNGTQLGYCKYGHGPNYILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPER--KFEVQFFM 98 (277)
T ss_pred hhhheeeecCceeeeeecCCCCceeEecccccccccccCCHHHHhcCCCCceEEEEECCCCCCCCCCCcc--cchHHHHH
Confidence 3456778899999999999986 68899998665 46799888877654 38999999999999977752 33333
Q ss_pred HHHHHHHHHHHHhCCceEEEEEechhHHHHHHHHHhCCCceeEEEEecCC
Q 025885 78 HLVGDLIGLLDKLGIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVP 127 (247)
Q Consensus 78 ~~~~~~~~~~~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~ 127 (247)
.-+++-.++++.|..+++.+.|+|-||..|+..|+++++.|.++|+.++.
T Consensus 99 ~Da~~avdLM~aLk~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ 148 (277)
T KOG2984|consen 99 KDAEYAVDLMEALKLEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAA 148 (277)
T ss_pred HhHHHHHHHHHHhCCCCeeEeeecCCCeEEEEeeccChhhhhhheeeccc
Confidence 34566778999999999999999999999999999999999999988754
No 69
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.44 E-value=1.9e-12 Score=104.81 Aligned_cols=106 Identities=14% Similarity=0.098 Sum_probs=73.2
Q ss_pred CCCeEEEEcCCCCChhhHH---HHHHHHHHCCCEEEEeCCCCCCCCCCCCC--------CCCCCHHHHHHHHHHHHHHhC
Q 025885 23 TGPAVLFIHGFPELWYSWR---NQLLYLSSRGYRAIAPDLRGYGDTDAPPS--------VTSYTALHLVGDLIGLLDKLG 91 (247)
Q Consensus 23 ~~~~vvllHG~~~~~~~~~---~~~~~l~~~g~~v~~~d~~G~G~s~~~~~--------~~~~~~~~~~~~~~~~~~~l~ 91 (247)
+.|+||++||++++...+. .+...+.+.||.|++||.+|++.+..... .......++.+-+..+.+..+
T Consensus 12 ~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 91 (212)
T TIGR01840 12 PRALVLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKANYS 91 (212)
T ss_pred CCCEEEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHHhcC
Confidence 4689999999999877765 34455556799999999999875432100 000111222222222233333
Q ss_pred C--ceEEEEEechhHHHHHHHHHhCCCceeEEEEecCCC
Q 025885 92 I--HQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPF 128 (247)
Q Consensus 92 ~--~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~ 128 (247)
+ ++++|+|||+||.+++.++..+|+++.+++.++++.
T Consensus 92 id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~ 130 (212)
T TIGR01840 92 IDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLP 130 (212)
T ss_pred cChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCc
Confidence 3 489999999999999999999999999999888654
No 70
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.43 E-value=4.5e-12 Score=106.65 Aligned_cols=107 Identities=21% Similarity=0.297 Sum_probs=77.5
Q ss_pred CCCeEEEEcCCCCChhhHHHH--HHHH-HHCCCEEEEeCC--CCCCCCCCCC------------------CCCCCCH-HH
Q 025885 23 TGPAVLFIHGFPELWYSWRNQ--LLYL-SSRGYRAIAPDL--RGYGDTDAPP------------------SVTSYTA-LH 78 (247)
Q Consensus 23 ~~~~vvllHG~~~~~~~~~~~--~~~l-~~~g~~v~~~d~--~G~G~s~~~~------------------~~~~~~~-~~ 78 (247)
+.|+|+|+||++++...|... +..+ .+.|+.|++||. +|+|.+.... ....+.. ..
T Consensus 41 ~~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~~ 120 (275)
T TIGR02821 41 PVPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGAGFYVDATEEPWSQHYRMYSY 120 (275)
T ss_pred CCCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCccccccCCcCcccccchHHHH
Confidence 358999999999999888543 3344 446899999998 5554332110 0011222 33
Q ss_pred HHHHHHHHHHH---hCCceEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCC
Q 025885 79 LVGDLIGLLDK---LGIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFP 129 (247)
Q Consensus 79 ~~~~~~~~~~~---l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~~ 129 (247)
+++++..+++. ++.++++++||||||.+++.++.++|+.+++++++++...
T Consensus 121 ~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~ 174 (275)
T TIGR02821 121 IVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPIVA 174 (275)
T ss_pred HHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCccC
Confidence 45777777777 3456899999999999999999999999999998876643
No 71
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.42 E-value=1e-12 Score=128.29 Aligned_cols=103 Identities=21% Similarity=0.319 Sum_probs=79.9
Q ss_pred CCCeEEEEcCCCCChhhHHHH-----HHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH---hCCce
Q 025885 23 TGPAVLFIHGFPELWYSWRNQ-----LLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDK---LGIHQ 94 (247)
Q Consensus 23 ~~~~vvllHG~~~~~~~~~~~-----~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~---l~~~~ 94 (247)
.++||||+||++.+.+.|+.+ ++.|.++||+|+++|+ |.++.+......+..+.+..+.+.++. +..++
T Consensus 66 ~~~plllvhg~~~~~~~~d~~~~~s~v~~L~~~g~~v~~~d~---G~~~~~~~~~~~~l~~~i~~l~~~l~~v~~~~~~~ 142 (994)
T PRK07868 66 VGPPVLMVHPMMMSADMWDVTRDDGAVGILHRAGLDPWVIDF---GSPDKVEGGMERNLADHVVALSEAIDTVKDVTGRD 142 (994)
T ss_pred CCCcEEEECCCCCCccceecCCcccHHHHHHHCCCEEEEEcC---CCCChhHcCccCCHHHHHHHHHHHHHHHHHhhCCc
Confidence 468999999999999999875 8899999999999994 666554321234555555555555544 33468
Q ss_pred EEEEEechhHHHHHHHHHhC-CCceeEEEEecCCC
Q 025885 95 VFLVGHDWGALIAWYFCLFR-PDRVKALVNMSVPF 128 (247)
Q Consensus 95 ~~lvGhS~Gg~~a~~~a~~~-p~~v~~lv~~~~~~ 128 (247)
++++||||||.+++.+++.+ +++|+++|++++|.
T Consensus 143 v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~ 177 (994)
T PRK07868 143 VHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPV 177 (994)
T ss_pred eEEEEEChhHHHHHHHHHhcCCCccceEEEEeccc
Confidence 99999999999999998755 56899999988874
No 72
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.41 E-value=1.5e-12 Score=119.73 Aligned_cols=114 Identities=16% Similarity=0.258 Sum_probs=87.1
Q ss_pred CCEEEEEEee---C--CCCeEEEEcCCCCChh---hH-HHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHH
Q 025885 12 NGINMHVASI---G--TGPAVLFIHGFPELWY---SW-RNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGD 82 (247)
Q Consensus 12 ~g~~~~~~~~---g--~~~~vvllHG~~~~~~---~~-~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~ 82 (247)
||.+|++... + +.|+||++||++.+.. .+ ......|+++||.|+++|+||+|.|..... .++ ...++|
T Consensus 5 DG~~L~~~~~~P~~~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~--~~~-~~~~~D 81 (550)
T TIGR00976 5 DGTRLAIDVYRPAGGGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFD--LLG-SDEAAD 81 (550)
T ss_pred CCCEEEEEEEecCCCCCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCceE--ecC-cccchH
Confidence 6778875432 2 3588999999987653 22 224567888999999999999999986542 222 446777
Q ss_pred HHHHHHHhCC-----ceEEEEEechhHHHHHHHHHhCCCceeEEEEecCCC
Q 025885 83 LIGLLDKLGI-----HQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPF 128 (247)
Q Consensus 83 ~~~~~~~l~~-----~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~ 128 (247)
+.++++.+.. .++.++|||+||.+++.+|..+|++++++|..++..
T Consensus 82 ~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~ 132 (550)
T TIGR00976 82 GYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVW 132 (550)
T ss_pred HHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCCceeEEeecCccc
Confidence 7777777632 489999999999999999999999999999877653
No 73
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=99.33 E-value=9.4e-12 Score=84.50 Aligned_cols=75 Identities=23% Similarity=0.348 Sum_probs=62.7
Q ss_pred CEEEEEEeeCC----CCeEEEEcCCCCChhhHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 025885 13 GINMHVASIGT----GPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLD 88 (247)
Q Consensus 13 g~~~~~~~~g~----~~~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~ 88 (247)
|.+|++..+.+ +.+|+++||+.+++..+..++..|+++||.|+++|+||||.|..... ...+++++++|+..+++
T Consensus 1 G~~L~~~~w~p~~~~k~~v~i~HG~~eh~~ry~~~a~~L~~~G~~V~~~D~rGhG~S~g~rg-~~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 1 GTKLFYRRWKPENPPKAVVVIVHGFGEHSGRYAHLAEFLAEQGYAVFAYDHRGHGRSEGKRG-HIDSFDDYVDDLHQFIQ 79 (79)
T ss_pred CcEEEEEEecCCCCCCEEEEEeCCcHHHHHHHHHHHHHHHhCCCEEEEECCCcCCCCCCccc-ccCCHHHHHHHHHHHhC
Confidence 56777776542 45799999999999999999999999999999999999999986543 34578899999988763
No 74
>PLN02442 S-formylglutathione hydrolase
Probab=99.33 E-value=1.9e-11 Score=103.33 Aligned_cols=106 Identities=21% Similarity=0.253 Sum_probs=74.8
Q ss_pred CCeEEEEcCCCCChhhHHHH---HHHHHHCCCEEEEeCCCCCCC-----CCC---C--------CCC--------CCCCH
Q 025885 24 GPAVLFIHGFPELWYSWRNQ---LLYLSSRGYRAIAPDLRGYGD-----TDA---P--------PSV--------TSYTA 76 (247)
Q Consensus 24 ~~~vvllHG~~~~~~~~~~~---~~~l~~~g~~v~~~d~~G~G~-----s~~---~--------~~~--------~~~~~ 76 (247)
.|+|+|+||++++...|... ...+...|+.|+.||..++|. +.. . ... ..+-.
T Consensus 47 ~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (283)
T PLN02442 47 VPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWKNWRMYDYVV 126 (283)
T ss_pred CCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCcceeeccccCCCcccchhhhHH
Confidence 48999999999988877543 355666799999999876651 100 0 000 01112
Q ss_pred HHHHHHHHHHHHHhCCceEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCC
Q 025885 77 LHLVGDLIGLLDKLGIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFP 129 (247)
Q Consensus 77 ~~~~~~~~~~~~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~~ 129 (247)
+++...+....+.++.++++++||||||..++.++.++|+++++++.+++...
T Consensus 127 ~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~ 179 (283)
T PLN02442 127 KELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIAN 179 (283)
T ss_pred HHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCccC
Confidence 23333344444445778899999999999999999999999999999887654
No 75
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=99.28 E-value=5.8e-11 Score=96.87 Aligned_cols=107 Identities=23% Similarity=0.267 Sum_probs=74.1
Q ss_pred CCCeEEEEcCCCCChhhHHHHHHHHHH--------CCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----
Q 025885 23 TGPAVLFIHGFPELWYSWRNQLLYLSS--------RGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKL---- 90 (247)
Q Consensus 23 ~~~~vvllHG~~~~~~~~~~~~~~l~~--------~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~l---- 90 (247)
+|.+|||+||..++...|+.+...+.+ ..+++++.|+......-.... -....+.+.+.+..+++..
T Consensus 3 ~g~pVlFIhG~~Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~g~~-l~~q~~~~~~~i~~i~~~~~~~~ 81 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFHGRT-LQRQAEFLAEAIKYILELYKSNR 81 (225)
T ss_pred CCCEEEEECcCCCCHhHHHHHHHHHhhhhhhccCccceeEEEeccCcccccccccc-HHHHHHHHHHHHHHHHHhhhhcc
Confidence 478999999999999999888766621 247888999876532211110 0111223333445555555
Q ss_pred -CCceEEEEEechhHHHHHHHHHhCC---CceeEEEEecCCCCC
Q 025885 91 -GIHQVFLVGHDWGALIAWYFCLFRP---DRVKALVNMSVPFPP 130 (247)
Q Consensus 91 -~~~~~~lvGhS~Gg~~a~~~a~~~p---~~v~~lv~~~~~~~~ 130 (247)
+.+++++|||||||.+|..++...+ +.|+.+|.+++|+..
T Consensus 82 ~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~g 125 (225)
T PF07819_consen 82 PPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHRG 125 (225)
T ss_pred CCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCCC
Confidence 4568999999999999998887643 579999999998764
No 76
>PRK11460 putative hydrolase; Provisional
Probab=99.26 E-value=9.9e-11 Score=96.11 Aligned_cols=106 Identities=13% Similarity=0.165 Sum_probs=70.0
Q ss_pred CCCeEEEEcCCCCChhhHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCC---------CCCCC---HHHHHHHHHHHHH--
Q 025885 23 TGPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPS---------VTSYT---ALHLVGDLIGLLD-- 88 (247)
Q Consensus 23 ~~~~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~---------~~~~~---~~~~~~~~~~~~~-- 88 (247)
..|+||++||++++...|..+.+.|...++.+..++++|...+..... ..... .....+.+.+.++
T Consensus 15 ~~~~vIlLHG~G~~~~~~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~i~~~ 94 (232)
T PRK11460 15 AQQLLLLFHGVGDNPVAMGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIETVRYW 94 (232)
T ss_pred CCcEEEEEeCCCCChHHHHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHHHHHH
Confidence 357899999999999999999999987665555555555422110000 00111 1222222333333
Q ss_pred --HhCC--ceEEEEEechhHHHHHHHHHhCCCceeEEEEecCCC
Q 025885 89 --KLGI--HQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPF 128 (247)
Q Consensus 89 --~l~~--~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~ 128 (247)
..+. ++++++|||+||.+++.++..+|+.+.+++.+++..
T Consensus 95 ~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~ 138 (232)
T PRK11460 95 QQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRY 138 (232)
T ss_pred HHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEecccc
Confidence 3343 479999999999999999999998888888776543
No 77
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.24 E-value=5.7e-11 Score=100.95 Aligned_cols=117 Identities=23% Similarity=0.361 Sum_probs=89.2
Q ss_pred CCEEEEEEeeCC-----CCeEEEEcCCCCChhh-----------HHHHH---HHHHHCCCEEEEeCCCCCC-CCCCCCCC
Q 025885 12 NGINMHVASIGT-----GPAVLFIHGFPELWYS-----------WRNQL---LYLSSRGYRAIAPDLRGYG-DTDAPPSV 71 (247)
Q Consensus 12 ~g~~~~~~~~g~-----~~~vvllHG~~~~~~~-----------~~~~~---~~l~~~g~~v~~~d~~G~G-~s~~~~~~ 71 (247)
++..+.|..+|. ...||++|++.++++. |..++ +.+....|.||+.|-.|.+ .|+.|.+.
T Consensus 34 ~~~~vay~T~Gtln~~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~ 113 (368)
T COG2021 34 SDARVAYETYGTLNAEKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSI 113 (368)
T ss_pred cCcEEEEEecccccccCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCc
Confidence 567889999883 4689999999886542 44443 2344456999999988875 45444321
Q ss_pred -----------CCCCHHHHHHHHHHHHHHhCCceEE-EEEechhHHHHHHHHHhCCCceeEEEEecCCC
Q 025885 72 -----------TSYTALHLVGDLIGLLDKLGIHQVF-LVGHDWGALIAWYFCLFRPDRVKALVNMSVPF 128 (247)
Q Consensus 72 -----------~~~~~~~~~~~~~~~~~~l~~~~~~-lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~ 128 (247)
..+++.++++--..++++||++++. +||-||||+.++.++..+|++|+++|.++++.
T Consensus 114 ~p~g~~yg~~FP~~ti~D~V~aq~~ll~~LGI~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~ 182 (368)
T COG2021 114 NPGGKPYGSDFPVITIRDMVRAQRLLLDALGIKKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAA 182 (368)
T ss_pred CCCCCccccCCCcccHHHHHHHHHHHHHhcCcceEeeeeccChHHHHHHHHHHhChHHHhhhheecccc
Confidence 1245667777667889999999975 99999999999999999999999999988753
No 78
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.22 E-value=1.7e-10 Score=94.09 Aligned_cols=101 Identities=15% Similarity=0.169 Sum_probs=83.5
Q ss_pred CeEEEEcCCCCChhhHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCc-eEEEEEechh
Q 025885 25 PAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIH-QVFLVGHDWG 103 (247)
Q Consensus 25 ~~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~lvGhS~G 103 (247)
++|+++|+.+++...|..+++.+....+.|++++.+|.+.... ...++++++++..+.+.....+ ++.|+|||+|
T Consensus 1 ~~lf~~p~~gG~~~~y~~la~~l~~~~~~v~~i~~~~~~~~~~----~~~si~~la~~y~~~I~~~~~~gp~~L~G~S~G 76 (229)
T PF00975_consen 1 RPLFCFPPAGGSASSYRPLARALPDDVIGVYGIEYPGRGDDEP----PPDSIEELASRYAEAIRARQPEGPYVLAGWSFG 76 (229)
T ss_dssp -EEEEESSTTCSGGGGHHHHHHHTTTEEEEEEECSTTSCTTSH----EESSHHHHHHHHHHHHHHHTSSSSEEEEEETHH
T ss_pred CeEEEEcCCccCHHHHHHHHHhCCCCeEEEEEEecCCCCCCCC----CCCCHHHHHHHHHHHhhhhCCCCCeeehccCcc
Confidence 4799999999999999999999976448999999999983322 2458999999998888887666 9999999999
Q ss_pred HHHHHHHHHh---CCCceeEEEEecCCCC
Q 025885 104 ALIAWYFCLF---RPDRVKALVNMSVPFP 129 (247)
Q Consensus 104 g~~a~~~a~~---~p~~v~~lv~~~~~~~ 129 (247)
|.+|+.+|.+ ....+..+++++++.+
T Consensus 77 g~lA~E~A~~Le~~G~~v~~l~liD~~~p 105 (229)
T PF00975_consen 77 GILAFEMARQLEEAGEEVSRLILIDSPPP 105 (229)
T ss_dssp HHHHHHHHHHHHHTT-SESEEEEESCSST
T ss_pred HHHHHHHHHHHHHhhhccCceEEecCCCC
Confidence 9999999875 3456999999997654
No 79
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=99.20 E-value=7.8e-10 Score=90.97 Aligned_cols=124 Identities=23% Similarity=0.256 Sum_probs=102.1
Q ss_pred ceEEEEeCCEEEEEEeeC----CCCeEEEEcCCCCChhh-HHHH-----HHHHHHCCCEEEEeCCCCCC--CCCCCCCCC
Q 025885 5 EHTTVATNGINMHVASIG----TGPAVLFIHGFPELWYS-WRNQ-----LLYLSSRGYRAIAPDLRGYG--DTDAPPSVT 72 (247)
Q Consensus 5 ~~~~~~~~g~~~~~~~~g----~~~~vvllHG~~~~~~~-~~~~-----~~~l~~~g~~v~~~d~~G~G--~s~~~~~~~ 72 (247)
+.+.+++....+|+...| ++|++|-.|..+-+..+ |..+ +..+.++ |.++.+|.||+- ....|.+..
T Consensus 23 ~e~~V~T~~G~v~V~V~Gd~~~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~-fcv~HV~~PGqe~gAp~~p~~y~ 101 (326)
T KOG2931|consen 23 QEHDVETAHGVVHVTVYGDPKGNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEH-FCVYHVDAPGQEDGAPSFPEGYP 101 (326)
T ss_pred eeeeeccccccEEEEEecCCCCCCceEEEecccccchHhHhHHhhcCHhHHHHHhh-eEEEecCCCccccCCccCCCCCC
Confidence 456677777888888777 26889999999988766 6554 3456665 999999999994 444455434
Q ss_pred CCCHHHHHHHHHHHHHHhCCceEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCC
Q 025885 73 SYTALHLVGDLIGLLDKLGIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFP 129 (247)
Q Consensus 73 ~~~~~~~~~~~~~~~~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~~ 129 (247)
..+.+++++++..++++++.+.++-+|--.|+.|..++|..||+||.++|++++...
T Consensus 102 yPsmd~LAd~l~~VL~~f~lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~ 158 (326)
T KOG2931|consen 102 YPSMDDLADMLPEVLDHFGLKSVIGMGVGAGAYILARFALNHPERVLGLVLINCDPC 158 (326)
T ss_pred CCCHHHHHHHHHHHHHhcCcceEEEecccccHHHHHHHHhcChhheeEEEEEecCCC
Confidence 558999999999999999999999999999999999999999999999999986543
No 80
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=99.19 E-value=6.1e-10 Score=92.36 Aligned_cols=122 Identities=24% Similarity=0.251 Sum_probs=87.2
Q ss_pred EEEEeCCEEEEEEeeCC----CCeEEEEcCCCCChhh-HHHH-----HHHHHHCCCEEEEeCCCCCCC--CCCCCCCCCC
Q 025885 7 TTVATNGINMHVASIGT----GPAVLFIHGFPELWYS-WRNQ-----LLYLSSRGYRAIAPDLRGYGD--TDAPPSVTSY 74 (247)
Q Consensus 7 ~~~~~~g~~~~~~~~g~----~~~vvllHG~~~~~~~-~~~~-----~~~l~~~g~~v~~~d~~G~G~--s~~~~~~~~~ 74 (247)
+.+++.-..+++...|+ +|++|-+|-.+-+..+ |..+ +..+.+ .|.++-+|.||+.. +..|.+....
T Consensus 2 h~v~t~~G~v~V~v~G~~~~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~-~f~i~Hi~aPGqe~ga~~~p~~y~yP 80 (283)
T PF03096_consen 2 HDVETPYGSVHVTVQGDPKGNKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQ-NFCIYHIDAPGQEEGAATLPEGYQYP 80 (283)
T ss_dssp EEEEETTEEEEEEEESS--TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHHT-TSEEEEEE-TTTSTT-----TT----
T ss_pred ceeccCceEEEEEEEecCCCCCceEEEeccccccchHHHHHHhcchhHHHHhh-ceEEEEEeCCCCCCCccccccccccc
Confidence 46778888999988873 6899999999988876 6655 345555 59999999999954 3444443355
Q ss_pred CHHHHHHHHHHHHHHhCCceEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCC
Q 025885 75 TALHLVGDLIGLLDKLGIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFP 129 (247)
Q Consensus 75 ~~~~~~~~~~~~~~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~~ 129 (247)
+.+++++++.+++++++++.++.+|--.||.|..++|..+|++|.++|++++...
T Consensus 81 smd~LAe~l~~Vl~~f~lk~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~ 135 (283)
T PF03096_consen 81 SMDQLAEMLPEVLDHFGLKSVIGFGVGAGANILARFALKHPERVLGLILVNPTCT 135 (283)
T ss_dssp -HHHHHCTHHHHHHHHT---EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S
T ss_pred CHHHHHHHHHHHHHhCCccEEEEEeeccchhhhhhccccCccceeEEEEEecCCC
Confidence 8899999999999999999999999999999999999999999999999986543
No 81
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=99.13 E-value=3.5e-10 Score=100.48 Aligned_cols=95 Identities=21% Similarity=0.315 Sum_probs=73.3
Q ss_pred CChhhHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEechhHHHHHHHHHhC
Q 025885 35 ELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVFLVGHDWGALIAWYFCLFR 114 (247)
Q Consensus 35 ~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~lvGhS~Gg~~a~~~a~~~ 114 (247)
.....|..+++.|.+.||.+ ..|++|+|.+.+.........+++.+.+.++.+..+.++++||||||||.++..++..+
T Consensus 105 ~~~~~~~~li~~L~~~GY~~-~~dL~g~gYDwR~~~~~~~~~~~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl~~~ 183 (440)
T PLN02733 105 DEVYYFHDMIEQLIKWGYKE-GKTLFGFGYDFRQSNRLPETMDGLKKKLETVYKASGGKKVNIISHSMGGLLVKCFMSLH 183 (440)
T ss_pred chHHHHHHHHHHHHHcCCcc-CCCcccCCCCccccccHHHHHHHHHHHHHHHHHHcCCCCEEEEEECHhHHHHHHHHHHC
Confidence 45688999999999999755 88999999887653211122344455555555666778999999999999999999988
Q ss_pred CCc----eeEEEEecCCCCC
Q 025885 115 PDR----VKALVNMSVPFPP 130 (247)
Q Consensus 115 p~~----v~~lv~~~~~~~~ 130 (247)
|+. |+++|++++|+..
T Consensus 184 p~~~~k~I~~~I~la~P~~G 203 (440)
T PLN02733 184 SDVFEKYVNSWIAIAAPFQG 203 (440)
T ss_pred CHhHHhHhccEEEECCCCCC
Confidence 864 7899999988764
No 82
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.11 E-value=2.3e-10 Score=90.21 Aligned_cols=118 Identities=18% Similarity=0.266 Sum_probs=87.4
Q ss_pred CceEEEEe---CCEEEEEEee---CCCCeEEEEcCCCCChhhHHHHHHHH-HHCCCEEEEeCCCCCCCCCCCCCCCCCCH
Q 025885 4 IEHTTVAT---NGINMHVASI---GTGPAVLFIHGFPELWYSWRNQLLYL-SSRGYRAIAPDLRGYGDTDAPPSVTSYTA 76 (247)
Q Consensus 4 ~~~~~~~~---~g~~~~~~~~---g~~~~vvllHG~~~~~~~~~~~~~~l-~~~g~~v~~~d~~G~G~s~~~~~~~~~~~ 76 (247)
+.+..+++ |.++++.+.. .+.|+++.+|+..++-......+..+ ...+.+|+.++.||||.|...+..
T Consensus 52 ~pye~i~l~T~D~vtL~a~~~~~E~S~pTlLyfh~NAGNmGhr~~i~~~fy~~l~mnv~ivsYRGYG~S~GspsE----- 126 (300)
T KOG4391|consen 52 MPYERIELRTRDKVTLDAYLMLSESSRPTLLYFHANAGNMGHRLPIARVFYVNLKMNVLIVSYRGYGKSEGSPSE----- 126 (300)
T ss_pred CCceEEEEEcCcceeEeeeeecccCCCceEEEEccCCCcccchhhHHHHHHHHcCceEEEEEeeccccCCCCccc-----
Confidence 44444443 7888886532 35799999999999877666665543 445899999999999999876532
Q ss_pred HHHHHHHHHHHHHh------CCceEEEEEechhHHHHHHHHHhCCCceeEEEEecC
Q 025885 77 LHLVGDLIGLLDKL------GIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSV 126 (247)
Q Consensus 77 ~~~~~~~~~~~~~l------~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~ 126 (247)
+.+.-|-.++++++ ...+++|.|.|.||++|..+|++..+++.++|+-+.
T Consensus 127 ~GL~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ivENT 182 (300)
T KOG4391|consen 127 EGLKLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVENT 182 (300)
T ss_pred cceeccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhheeeeeeech
Confidence 22333444555554 345799999999999999999999999999998654
No 83
>PRK10162 acetyl esterase; Provisional
Probab=99.07 E-value=2.2e-09 Score=92.21 Aligned_cols=100 Identities=16% Similarity=0.188 Sum_probs=71.6
Q ss_pred CCeEEEEcCCC---CChhhHHHHHHHHHH-CCCEEEEeCCCCCCCCCCCCCCCCCCHHH---HHHHHHHHHHHhCC--ce
Q 025885 24 GPAVLFIHGFP---ELWYSWRNQLLYLSS-RGYRAIAPDLRGYGDTDAPPSVTSYTALH---LVGDLIGLLDKLGI--HQ 94 (247)
Q Consensus 24 ~~~vvllHG~~---~~~~~~~~~~~~l~~-~g~~v~~~d~~G~G~s~~~~~~~~~~~~~---~~~~~~~~~~~l~~--~~ 94 (247)
.|+||++||.+ ++...|..+...|+. .|+.|+++|+|...+...|. ..++ ..+.+.+..+.++. ++
T Consensus 81 ~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlape~~~p~-----~~~D~~~a~~~l~~~~~~~~~d~~~ 155 (318)
T PRK10162 81 QATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSPEARFPQ-----AIEEIVAVCCYFHQHAEDYGINMSR 155 (318)
T ss_pred CCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCCCCCCCC-----cHHHHHHHHHHHHHhHHHhCCChhH
Confidence 58899999976 566778888888877 49999999999654432222 2333 23334444445664 48
Q ss_pred EEEEEechhHHHHHHHHHhC------CCceeEEEEecCCC
Q 025885 95 VFLVGHDWGALIAWYFCLFR------PDRVKALVNMSVPF 128 (247)
Q Consensus 95 ~~lvGhS~Gg~~a~~~a~~~------p~~v~~lv~~~~~~ 128 (247)
++++|+|+||.++..++... +.++.++|++.+..
T Consensus 156 i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~ 195 (318)
T PRK10162 156 IGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLY 195 (318)
T ss_pred EEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCcc
Confidence 99999999999999988653 35788889887654
No 84
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.07 E-value=1.6e-09 Score=94.28 Aligned_cols=102 Identities=23% Similarity=0.310 Sum_probs=66.6
Q ss_pred CeEEEEcCCCCChhhHH-HHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC---CceEEEEEe
Q 025885 25 PAVLFIHGFPELWYSWR-NQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLG---IHQVFLVGH 100 (247)
Q Consensus 25 ~~vvllHG~~~~~~~~~-~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~l~---~~~~~lvGh 100 (247)
|+||++-|.-+...++. ...+.|+.+|+.++++|+||.|.|..-.- ..+.+.+.+.+.+.+.... .++|.++|.
T Consensus 191 P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l--~~D~~~l~~aVLd~L~~~p~VD~~RV~~~G~ 268 (411)
T PF06500_consen 191 PTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPL--TQDSSRLHQAVLDYLASRPWVDHTRVGAWGF 268 (411)
T ss_dssp EEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S---S-CCHHHHHHHHHHHHSTTEEEEEEEEEEE
T ss_pred CEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccccCCC--CcCHHHHHHHHHHHHhcCCccChhheEEEEe
Confidence 45555555555555544 44567889999999999999999854321 1222345555655665553 358999999
Q ss_pred chhHHHHHHHHHhCCCceeEEEEecCCC
Q 025885 101 DWGALIAWYFCLFRPDRVKALVNMSVPF 128 (247)
Q Consensus 101 S~Gg~~a~~~a~~~p~~v~~lv~~~~~~ 128 (247)
|+||.+|.++|..+++|++++|.++++.
T Consensus 269 SfGGy~AvRlA~le~~RlkavV~~Ga~v 296 (411)
T PF06500_consen 269 SFGGYYAVRLAALEDPRLKAVVALGAPV 296 (411)
T ss_dssp THHHHHHHHHHHHTTTT-SEEEEES---
T ss_pred ccchHHHHHHHHhcccceeeEeeeCchH
Confidence 9999999999999999999999998764
No 85
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.07 E-value=1.1e-09 Score=91.89 Aligned_cols=104 Identities=27% Similarity=0.363 Sum_probs=73.4
Q ss_pred CCeEEEEcCCCCChhh--HHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----CCceEEE
Q 025885 24 GPAVLFIHGFPELWYS--WRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKL----GIHQVFL 97 (247)
Q Consensus 24 ~~~vvllHG~~~~~~~--~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~l----~~~~~~l 97 (247)
+|.||++||+.|++.+ -+.+++.+.++||.||+++.|||+.+..... .-|+ ..+.+|+..+++.+ ...++..
T Consensus 75 ~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p-~~yh-~G~t~D~~~~l~~l~~~~~~r~~~a 152 (345)
T COG0429 75 KPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTSP-RLYH-SGETEDIRFFLDWLKARFPPRPLYA 152 (345)
T ss_pred CceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccCc-ceec-ccchhHHHHHHHHHHHhCCCCceEE
Confidence 6899999999877654 4677889999999999999999998755321 1222 22335666666655 4568999
Q ss_pred EEechhH-HHHHHHHHhCCC-ceeEEEEecCCCC
Q 025885 98 VGHDWGA-LIAWYFCLFRPD-RVKALVNMSVPFP 129 (247)
Q Consensus 98 vGhS~Gg-~~a~~~a~~~p~-~v~~lv~~~~~~~ 129 (247)
||.|+|| +++..++..-.+ .+.+.+.++.|+.
T Consensus 153 vG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~D 186 (345)
T COG0429 153 VGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFD 186 (345)
T ss_pred EEecccHHHHHHHHHhhccCcccceeeeeeCHHH
Confidence 9999999 555555544322 4677777777654
No 86
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.05 E-value=3.1e-09 Score=86.29 Aligned_cols=96 Identities=24% Similarity=0.328 Sum_probs=72.3
Q ss_pred CCeEEEEcCCCCChhhHHHHHHHHHH-CCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----C-CceEEE
Q 025885 24 GPAVLFIHGFPELWYSWRNQLLYLSS-RGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKL----G-IHQVFL 97 (247)
Q Consensus 24 ~~~vvllHG~~~~~~~~~~~~~~l~~-~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~l----~-~~~~~l 97 (247)
.+++|+.||...+-.....+...|.. -+++++.+|..|+|.|...+. .. ...+|+.++-+.+ | .++++|
T Consensus 60 ~~~lly~hGNa~Dlgq~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~ps--E~---n~y~Di~avye~Lr~~~g~~~~Iil 134 (258)
T KOG1552|consen 60 HPTLLYSHGNAADLGQMVELFKELSIFLNCNVVSYDYSGYGRSSGKPS--ER---NLYADIKAVYEWLRNRYGSPERIIL 134 (258)
T ss_pred ceEEEEcCCcccchHHHHHHHHHHhhcccceEEEEecccccccCCCcc--cc---cchhhHHHHHHHHHhhcCCCceEEE
Confidence 48999999996665554455555544 369999999999999987653 22 3344454444443 3 578999
Q ss_pred EEechhHHHHHHHHHhCCCceeEEEEecC
Q 025885 98 VGHDWGALIAWYFCLFRPDRVKALVNMSV 126 (247)
Q Consensus 98 vGhS~Gg~~a~~~a~~~p~~v~~lv~~~~ 126 (247)
+|+|+|+..+..+|++.| +.++|+.++
T Consensus 135 ~G~SiGt~~tv~Lasr~~--~~alVL~SP 161 (258)
T KOG1552|consen 135 YGQSIGTVPTVDLASRYP--LAAVVLHSP 161 (258)
T ss_pred EEecCCchhhhhHhhcCC--cceEEEecc
Confidence 999999999999999999 999998864
No 87
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.03 E-value=1.4e-08 Score=88.03 Aligned_cols=105 Identities=23% Similarity=0.319 Sum_probs=77.9
Q ss_pred CCCeEEEEcCCCCChhh--HHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----CCceEE
Q 025885 23 TGPAVLFIHGFPELWYS--WRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKL----GIHQVF 96 (247)
Q Consensus 23 ~~~~vvllHG~~~~~~~--~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~l----~~~~~~ 96 (247)
..|+||++||..+++.+ -+.++..+.++||+|++++.||+|.+.-... .-|+. ....|+.++++++ ...+..
T Consensus 124 ~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g~~LtTp-r~f~a-g~t~Dl~~~v~~i~~~~P~a~l~ 201 (409)
T KOG1838|consen 124 TDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGGSKLTTP-RLFTA-GWTEDLREVVNHIKKRYPQAPLF 201 (409)
T ss_pred CCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCCCccCCC-ceeec-CCHHHHHHHHHHHHHhCCCCceE
Confidence 35899999999877654 4677888888999999999999998865432 22222 2345566555554 455899
Q ss_pred EEEechhHHHHHHHHHhCCC--ceeEEEEecCCCC
Q 025885 97 LVGHDWGALIAWYFCLFRPD--RVKALVNMSVPFP 129 (247)
Q Consensus 97 lvGhS~Gg~~a~~~a~~~p~--~v~~lv~~~~~~~ 129 (247)
.||.||||.+.+.+..+-.+ .+.+.+.+|.|+.
T Consensus 202 avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd 236 (409)
T KOG1838|consen 202 AVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWD 236 (409)
T ss_pred EEEecchHHHHHHHhhhccCCCCceeEEEEeccch
Confidence 99999999999999876543 3677777887765
No 88
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.01 E-value=4.9e-09 Score=82.76 Aligned_cols=108 Identities=19% Similarity=0.269 Sum_probs=85.7
Q ss_pred eeCCCCeEEEEcCCCCChh--hHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC-ce--
Q 025885 20 SIGTGPAVLFIHGFPELWY--SWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGI-HQ-- 94 (247)
Q Consensus 20 ~~g~~~~vvllHG~~~~~~--~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~-- 94 (247)
+.|+...+|++||+-++.. ....++..|++.|+.++.+|.+|.|+|+..-.... ....++|+..+++++.- .+
T Consensus 29 ~tgs~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~Gn--~~~eadDL~sV~q~~s~~nr~v 106 (269)
T KOG4667|consen 29 ETGSTEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFYYGN--YNTEADDLHSVIQYFSNSNRVV 106 (269)
T ss_pred ccCCceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCccccCc--ccchHHHHHHHHHHhccCceEE
Confidence 4456789999999988754 35667888999999999999999999987643233 34456999999999843 33
Q ss_pred EEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCC
Q 025885 95 VFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFPP 130 (247)
Q Consensus 95 ~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~~~ 130 (247)
-+++|||-||-+++.++.++++ +..+|.+++-+..
T Consensus 107 ~vi~gHSkGg~Vvl~ya~K~~d-~~~viNcsGRydl 141 (269)
T KOG4667|consen 107 PVILGHSKGGDVVLLYASKYHD-IRNVINCSGRYDL 141 (269)
T ss_pred EEEEeecCccHHHHHHHHhhcC-chheEEcccccch
Confidence 3789999999999999999987 8888887776653
No 89
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=99.01 E-value=2.5e-09 Score=107.44 Aligned_cols=101 Identities=15% Similarity=0.124 Sum_probs=87.2
Q ss_pred eCCCCeEEEEcCCCCChhhHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC-ceEEEEE
Q 025885 21 IGTGPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGI-HQVFLVG 99 (247)
Q Consensus 21 ~g~~~~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~lvG 99 (247)
.+++++++++||++++...|..+.+.|.. +++|+++|++|++.+.. ..++.+++++++.+.++.+.. .+++++|
T Consensus 1065 ~~~~~~l~~lh~~~g~~~~~~~l~~~l~~-~~~v~~~~~~g~~~~~~----~~~~l~~la~~~~~~i~~~~~~~p~~l~G 1139 (1296)
T PRK10252 1065 EGDGPTLFCFHPASGFAWQFSVLSRYLDP-QWSIYGIQSPRPDGPMQ----TATSLDEVCEAHLATLLEQQPHGPYHLLG 1139 (1296)
T ss_pred cCCCCCeEEecCCCCchHHHHHHHHhcCC-CCcEEEEECCCCCCCCC----CCCCHHHHHHHHHHHHHhhCCCCCEEEEE
Confidence 35678999999999999999999999965 59999999999986522 357899999999999988764 4899999
Q ss_pred echhHHHHHHHHHh---CCCceeEEEEecC
Q 025885 100 HDWGALIAWYFCLF---RPDRVKALVNMSV 126 (247)
Q Consensus 100 hS~Gg~~a~~~a~~---~p~~v~~lv~~~~ 126 (247)
||+||.++..+|.+ .++++..++++++
T Consensus 1140 ~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~ 1169 (1296)
T PRK10252 1140 YSLGGTLAQGIAARLRARGEEVAFLGLLDT 1169 (1296)
T ss_pred echhhHHHHHHHHHHHHcCCceeEEEEecC
Confidence 99999999999985 5788999998875
No 90
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.99 E-value=2.7e-09 Score=87.74 Aligned_cols=105 Identities=31% Similarity=0.421 Sum_probs=73.6
Q ss_pred CCCCeEEEEcCCCCChhhHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH-Hh------CCce
Q 025885 22 GTGPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLD-KL------GIHQ 94 (247)
Q Consensus 22 g~~~~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~-~l------~~~~ 94 (247)
|.=|.+||+||+.-....+..+++.++..||-|+++|+...+...... ......++++.+.+-++ .+ ...+
T Consensus 15 g~yPVv~f~~G~~~~~s~Ys~ll~hvAShGyIVV~~d~~~~~~~~~~~--~~~~~~~vi~Wl~~~L~~~l~~~v~~D~s~ 92 (259)
T PF12740_consen 15 GTYPVVLFLHGFLLINSWYSQLLEHVASHGYIVVAPDLYSIGGPDDTD--EVASAAEVIDWLAKGLESKLPLGVKPDFSK 92 (259)
T ss_pred CCcCEEEEeCCcCCCHHHHHHHHHHHHhCceEEEEecccccCCCCcch--hHHHHHHHHHHHHhcchhhccccccccccc
Confidence 344899999999977777899999999999999999976643321111 01112222222222111 11 3458
Q ss_pred EEEEEechhHHHHHHHHHhC-----CCceeEEEEecCCC
Q 025885 95 VFLVGHDWGALIAWYFCLFR-----PDRVKALVNMSVPF 128 (247)
Q Consensus 95 ~~lvGhS~Gg~~a~~~a~~~-----p~~v~~lv~~~~~~ 128 (247)
+.|.|||-||-+|..++..+ +.++++++++++.-
T Consensus 93 l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 93 LALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVD 131 (259)
T ss_pred eEEeeeCCCCHHHHHHHhhhcccccccceeEEEEecccc
Confidence 99999999999999999887 56899999998654
No 91
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.98 E-value=1.7e-09 Score=87.36 Aligned_cols=102 Identities=23% Similarity=0.338 Sum_probs=62.4
Q ss_pred CeEEEEcCCCC-ChhhHHHHHHHHHHCCCE---EEEeCCCCCCCCCCCCCC--CCCCHHHHHHHHHHHHHHhCCceEEEE
Q 025885 25 PAVLFIHGFPE-LWYSWRNQLLYLSSRGYR---AIAPDLRGYGDTDAPPSV--TSYTALHLVGDLIGLLDKLGIHQVFLV 98 (247)
Q Consensus 25 ~~vvllHG~~~-~~~~~~~~~~~l~~~g~~---v~~~d~~G~G~s~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~lv 98 (247)
.||||+||..+ ....|..+.+.|.++||. |+++++-....+...... ...+..++.+.+.+++++.|- +|-||
T Consensus 2 ~PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~TGa-kVDIV 80 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYTGA-KVDIV 80 (219)
T ss_dssp --EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHHT---EEEE
T ss_pred CCEEEECCCCcchhhCHHHHHHHHHHcCCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHhhCC-EEEEE
Confidence 58999999998 668899999999999999 799998443321111000 011224566667777778898 99999
Q ss_pred EechhHHHHHHHHHhC-------------CCceeEEEEecCC
Q 025885 99 GHDWGALIAWYFCLFR-------------PDRVKALVNMSVP 127 (247)
Q Consensus 99 GhS~Gg~~a~~~a~~~-------------p~~v~~lv~~~~~ 127 (247)
||||||.++..+.... +.++..+|.++++
T Consensus 81 gHS~G~~iaR~yi~~~~~~d~~~~lg~~~~~~v~t~v~lag~ 122 (219)
T PF01674_consen 81 GHSMGGTIARYYIKGGGGADKVVNLGPPLTSKVGTFVGLAGA 122 (219)
T ss_dssp EETCHHHHHHHHHHHCTGGGTEEE----GGG-EEEEEEES--
T ss_pred EcCCcCHHHHHHHHHcCCCCcccCcccccccccccccccccc
Confidence 9999999999887643 2346666666644
No 92
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=98.97 E-value=1.4e-08 Score=84.97 Aligned_cols=105 Identities=22% Similarity=0.301 Sum_probs=85.8
Q ss_pred CCeEEEEcCCCCChhhHHHHHHHHHHC---CCEEEEeCCCCCCCCCCC----CCCCCCCHHHHHHHHHHHHHHhC-----
Q 025885 24 GPAVLFIHGFPELWYSWRNQLLYLSSR---GYRAIAPDLRGYGDTDAP----PSVTSYTALHLVGDLIGLLDKLG----- 91 (247)
Q Consensus 24 ~~~vvllHG~~~~~~~~~~~~~~l~~~---g~~v~~~d~~G~G~s~~~----~~~~~~~~~~~~~~~~~~~~~l~----- 91 (247)
...+|+++|.||--.-|..++..|.+. .+.|++..+.||-.++.. .....|+.++.++...++++.+-
T Consensus 2 ~~li~~IPGNPGlv~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~~ 81 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKNK 81 (266)
T ss_pred cEEEEEECCCCChHHHHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhcC
Confidence 357899999999999999998888744 799999999999766554 12357888888877777777652
Q ss_pred -CceEEEEEechhHHHHHHHHHhCC---CceeEEEEecCCC
Q 025885 92 -IHQVFLVGHDWGALIAWYFCLFRP---DRVKALVNMSVPF 128 (247)
Q Consensus 92 -~~~~~lvGhS~Gg~~a~~~a~~~p---~~v~~lv~~~~~~ 128 (247)
..+++|+|||.|+.++++++.+.+ .+|.+++++.+..
T Consensus 82 ~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi 122 (266)
T PF10230_consen 82 PNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTI 122 (266)
T ss_pred CCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCcc
Confidence 247999999999999999999999 7899999987653
No 93
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=98.93 E-value=4.1e-09 Score=85.51 Aligned_cols=102 Identities=28% Similarity=0.365 Sum_probs=70.6
Q ss_pred CCCeEEEEcCCCCChhhHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCC-CC---C------CHHHHHHHHHHHHHHh--
Q 025885 23 TGPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSV-TS---Y------TALHLVGDLIGLLDKL-- 90 (247)
Q Consensus 23 ~~~~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~-~~---~------~~~~~~~~~~~~~~~l-- 90 (247)
+.|.||++|++.|-....+.+++.|+++||.|++||+-+-... .+... .. . ..+...+++.+.++.+
T Consensus 13 ~~~~Vvv~~d~~G~~~~~~~~ad~lA~~Gy~v~~pD~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~ 91 (218)
T PF01738_consen 13 PRPAVVVIHDIFGLNPNIRDLADRLAEEGYVVLAPDLFGGRGA-PPSDPEEAFAAMRELFAPRPEQVAADLQAAVDYLRA 91 (218)
T ss_dssp SEEEEEEE-BTTBS-HHHHHHHHHHHHTT-EEEEE-CCCCTS---CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEEcCCCCCchHHHHHHHHHHhcCCCEEecccccCCCC-CccchhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHh
Confidence 4689999999998887788899999999999999998644330 11100 00 0 0234556676666666
Q ss_pred -C---CceEEEEEechhHHHHHHHHHhCCCceeEEEEecC
Q 025885 91 -G---IHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSV 126 (247)
Q Consensus 91 -~---~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~ 126 (247)
. .+++.++|+||||.+++.+|... +.+++.|..-+
T Consensus 92 ~~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg 130 (218)
T PF01738_consen 92 QPEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYG 130 (218)
T ss_dssp TTTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-
T ss_pred ccccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcC
Confidence 2 24899999999999999999887 57999988765
No 94
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=98.92 E-value=5.8e-09 Score=84.62 Aligned_cols=108 Identities=23% Similarity=0.257 Sum_probs=63.7
Q ss_pred CCCeEEEEcCCCCChhhHHHHHH-HHHHCCCEEEEeCCCC------CCC---CCCCCC---C-CCC---CHHHHHHHHHH
Q 025885 23 TGPAVLFIHGFPELWYSWRNQLL-YLSSRGYRAIAPDLRG------YGD---TDAPPS---V-TSY---TALHLVGDLIG 85 (247)
Q Consensus 23 ~~~~vvllHG~~~~~~~~~~~~~-~l~~~g~~v~~~d~~G------~G~---s~~~~~---~-~~~---~~~~~~~~~~~ 85 (247)
..++|||+||++++...|..... .+.....+++.|+-|. .|. +..+.. . ... .....++.+.+
T Consensus 13 ~~~lvi~LHG~G~~~~~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~~l~~ 92 (216)
T PF02230_consen 13 AKPLVILLHGYGDSEDLFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAERLDE 92 (216)
T ss_dssp -SEEEEEE--TTS-HHHHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHHHHHH
T ss_pred CceEEEEECCCCCCcchhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHHHHHH
Confidence 35889999999999977766655 2233457788876542 232 221110 0 001 12233344555
Q ss_pred HHHHh-----CCceEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCC
Q 025885 86 LLDKL-----GIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFPP 130 (247)
Q Consensus 86 ~~~~l-----~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~~~ 130 (247)
+++.. ..++++|.|+|+||++++.++.++|+.+.++|.+++..+.
T Consensus 93 li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~ 142 (216)
T PF02230_consen 93 LIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPP 142 (216)
T ss_dssp HHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TT
T ss_pred HHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeeccccc
Confidence 55542 3458999999999999999999999999999999976543
No 95
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=98.91 E-value=6e-09 Score=94.14 Aligned_cols=102 Identities=14% Similarity=0.171 Sum_probs=81.6
Q ss_pred CCeEEEEcCCCCChhhH-----HHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----CCce
Q 025885 24 GPAVLFIHGFPELWYSW-----RNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKL----GIHQ 94 (247)
Q Consensus 24 ~~~vvllHG~~~~~~~~-----~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~l----~~~~ 94 (247)
++|||+++.+---.+.+ +.+++.|.++||+|+++|++.-+.+. ...+++++++.+.+.++.. |.++
T Consensus 215 ~~PLLIVPp~INK~YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~-----r~~~ldDYv~~i~~Ald~V~~~tG~~~ 289 (560)
T TIGR01839 215 ARPLLVVPPQINKFYIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAH-----REWGLSTYVDALKEAVDAVRAITGSRD 289 (560)
T ss_pred CCcEEEechhhhhhheeecCCcchHHHHHHHcCCeEEEEeCCCCChhh-----cCCCHHHHHHHHHHHHHHHHHhcCCCC
Confidence 58999999998666666 67899999999999999998866553 2445666666555555554 7789
Q ss_pred EEEEEechhHHHHHH----HHHhCCC-ceeEEEEecCCCCC
Q 025885 95 VFLVGHDWGALIAWY----FCLFRPD-RVKALVNMSVPFPP 130 (247)
Q Consensus 95 ~~lvGhS~Gg~~a~~----~a~~~p~-~v~~lv~~~~~~~~ 130 (247)
+.++|+|+||.++.. +++++++ +|++++++.++...
T Consensus 290 vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf 330 (560)
T TIGR01839 290 LNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDS 330 (560)
T ss_pred eeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeeccccc
Confidence 999999999999886 7888886 89999999887653
No 96
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.87 E-value=3.3e-08 Score=81.72 Aligned_cols=100 Identities=13% Similarity=0.169 Sum_probs=85.0
Q ss_pred CeEEEEcCCCCChhhHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC-ceEEEEEechh
Q 025885 25 PAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGI-HQVFLVGHDWG 103 (247)
Q Consensus 25 ~~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~lvGhS~G 103 (247)
|+|+++|+..|....|..+...+... ..|+..+.||++.... ...+++++++...+.+..... .+++|+|||+|
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l~~~-~~v~~l~a~g~~~~~~----~~~~l~~~a~~yv~~Ir~~QP~GPy~L~G~S~G 75 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAALGPL-LPVYGLQAPGYGAGEQ----PFASLDDMAAAYVAAIRRVQPEGPYVLLGWSLG 75 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHhccC-ceeeccccCccccccc----ccCCHHHHHHHHHHHHHHhCCCCCEEEEeeccc
Confidence 68999999999999999999999886 9999999999986332 234788999888888887754 48999999999
Q ss_pred HHHHHHHHHh---CCCceeEEEEecCCCC
Q 025885 104 ALIAWYFCLF---RPDRVKALVNMSVPFP 129 (247)
Q Consensus 104 g~~a~~~a~~---~p~~v~~lv~~~~~~~ 129 (247)
|.+|..+|.+ ..+.|..+++++++..
T Consensus 76 G~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 76 GAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred cHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 9999999876 4567999999998765
No 97
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=98.86 E-value=3.2e-08 Score=92.38 Aligned_cols=119 Identities=24% Similarity=0.349 Sum_probs=81.5
Q ss_pred eEEEEe-CCEEEEEEeeCC---C-----CeEEEEcCCCCChhh--HHHHHHHHHHCCCEEEEeCCCCCCC---CCCCC--
Q 025885 6 HTTVAT-NGINMHVASIGT---G-----PAVLFIHGFPELWYS--WRNQLLYLSSRGYRAIAPDLRGYGD---TDAPP-- 69 (247)
Q Consensus 6 ~~~~~~-~g~~~~~~~~g~---~-----~~vvllHG~~~~~~~--~~~~~~~l~~~g~~v~~~d~~G~G~---s~~~~-- 69 (247)
...+.. +|.+++.+...+ + |+||++||.|..... +...+..|+.+||.|+.|+.||-+. .-...
T Consensus 367 ~~~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~F~~~~~ 446 (620)
T COG1506 367 PVTYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGYGREFADAIR 446 (620)
T ss_pred EEEEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCccHHHHHHhhh
Confidence 333444 688888775431 1 789999999876554 5667888999999999999996533 21111
Q ss_pred -CCCCCCHHHHHHHHHHHHHHhC-C--ceEEEEEechhHHHHHHHHHhCCCceeEEEEecC
Q 025885 70 -SVTSYTALHLVGDLIGLLDKLG-I--HQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSV 126 (247)
Q Consensus 70 -~~~~~~~~~~~~~~~~~~~~l~-~--~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~ 126 (247)
.......+++.+.+. ++...+ . +++.+.|||+||.+++..+...| ++++.+...+
T Consensus 447 ~~~g~~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~ 505 (620)
T COG1506 447 GDWGGVDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-RFKAAVAVAG 505 (620)
T ss_pred hccCCccHHHHHHHHH-HHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-hhheEEeccC
Confidence 111224455544444 444443 2 48999999999999999999988 6777766554
No 98
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=98.86 E-value=3.2e-08 Score=81.93 Aligned_cols=108 Identities=22% Similarity=0.297 Sum_probs=70.0
Q ss_pred CCeEEEEcCCCCChhhHHHHHHHHH-HCCCE--E--EEeCCCCC----CCC----CCCC------CCCCCCHHHHHHHHH
Q 025885 24 GPAVLFIHGFPELWYSWRNQLLYLS-SRGYR--A--IAPDLRGY----GDT----DAPP------SVTSYTALHLVGDLI 84 (247)
Q Consensus 24 ~~~vvllHG~~~~~~~~~~~~~~l~-~~g~~--v--~~~d~~G~----G~s----~~~~------~~~~~~~~~~~~~~~ 84 (247)
..|.||+||+.++...+..++..+. +.|.. + +-++--|. |.- ..|. +....+....+..+.
T Consensus 11 ~tPTifihG~~gt~~s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~wl~ 90 (255)
T PF06028_consen 11 TTPTIFIHGYGGTANSFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAKWLK 90 (255)
T ss_dssp -EEEEEE--TTGGCCCCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHHHHH
T ss_pred CCcEEEECCCCCChhHHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHHHHH
Confidence 5789999999999999999999997 55542 3 33343342 221 1111 001124556667777
Q ss_pred HHHHHh----CCceEEEEEechhHHHHHHHHHhCCC-----ceeEEEEecCCCCCC
Q 025885 85 GLLDKL----GIHQVFLVGHDWGALIAWYFCLFRPD-----RVKALVNMSVPFPPR 131 (247)
Q Consensus 85 ~~~~~l----~~~~~~lvGhS~Gg~~a~~~a~~~p~-----~v~~lv~~~~~~~~~ 131 (247)
.++..| +++++.+|||||||..+..++..+.. ++..+|.|++|+...
T Consensus 91 ~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~ 146 (255)
T PF06028_consen 91 KVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGI 146 (255)
T ss_dssp HHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTT
T ss_pred HHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCcc
Confidence 777766 67899999999999999999887532 589999999998653
No 99
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.86 E-value=4.5e-08 Score=80.49 Aligned_cols=102 Identities=27% Similarity=0.320 Sum_probs=78.9
Q ss_pred CeEEEEcCCCCChhhHHHHHHHHHHCCCEEEEeCCCCC-CCCCCCC-CC---C-----CCCHHHHHHHHHHHHHHhC---
Q 025885 25 PAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGY-GDTDAPP-SV---T-----SYTALHLVGDLIGLLDKLG--- 91 (247)
Q Consensus 25 ~~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~-G~s~~~~-~~---~-----~~~~~~~~~~~~~~~~~l~--- 91 (247)
|.||++|++.+-....+.+.+.|+.+||.|++||+-+. |.+.... .. . ..+......|+.+.++.|.
T Consensus 28 P~VIv~hei~Gl~~~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~~~~L~~~~ 107 (236)
T COG0412 28 PGVIVLHEIFGLNPHIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAELETGLVERVDPAEVLADIDAALDYLARQP 107 (236)
T ss_pred CEEEEEecccCCchHHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHHHhhhhhccCCHHHHHHHHHHHHHHHHhCC
Confidence 78999999999999999999999999999999998763 2221111 00 0 1223566778888888773
Q ss_pred ---CceEEEEEechhHHHHHHHHHhCCCceeEEEEecCC
Q 025885 92 ---IHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVP 127 (247)
Q Consensus 92 ---~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~ 127 (247)
.++|.++|+||||.+++.++...| .+++.|..-+.
T Consensus 108 ~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~ 145 (236)
T COG0412 108 QVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYGG 145 (236)
T ss_pred CCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecCC
Confidence 357999999999999999999988 68888876543
No 100
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=98.84 E-value=5.6e-08 Score=78.73 Aligned_cols=105 Identities=15% Similarity=0.148 Sum_probs=68.6
Q ss_pred CCeEEEEcCCCCChhhHHHH--HHHHHH-CCCEEEEeCCCCCC----CCC-C-CCCC-CCCCHHHHHHHHHHHHHHhCC-
Q 025885 24 GPAVLFIHGFPELWYSWRNQ--LLYLSS-RGYRAIAPDLRGYG----DTD-A-PPSV-TSYTALHLVGDLIGLLDKLGI- 92 (247)
Q Consensus 24 ~~~vvllHG~~~~~~~~~~~--~~~l~~-~g~~v~~~d~~G~G----~s~-~-~~~~-~~~~~~~~~~~~~~~~~~l~~- 92 (247)
.|.||++||..++...+... ...+++ .||-|+.|+..... ... . .... ...+...+..-+..+....++
T Consensus 16 ~PLVv~LHG~~~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~lv~~v~~~~~iD 95 (220)
T PF10503_consen 16 VPLVVVLHGCGQSAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAALVDYVAARYNID 95 (220)
T ss_pred CCEEEEeCCCCCCHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhhHHHHHHhHhhhcccC
Confidence 47899999999998876543 234444 58999999854211 000 0 0000 011122222333344445444
Q ss_pred -ceEEEEEechhHHHHHHHHHhCCCceeEEEEecCCC
Q 025885 93 -HQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPF 128 (247)
Q Consensus 93 -~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~ 128 (247)
++|++.|+|.||+++..++..+|+.+.++.++++..
T Consensus 96 ~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~ 132 (220)
T PF10503_consen 96 PSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVP 132 (220)
T ss_pred CCceeeEEECHHHHHHHHHHHhCCccceEEEeecccc
Confidence 489999999999999999999999999998887654
No 101
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.83 E-value=1.3e-08 Score=82.76 Aligned_cols=102 Identities=25% Similarity=0.358 Sum_probs=72.0
Q ss_pred CCCeEEEEcCCCCChhhHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCC-CCHHHHHHHHHHHHHHh-------CCce
Q 025885 23 TGPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTS-YTALHLVGDLIGLLDKL-------GIHQ 94 (247)
Q Consensus 23 ~~~~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~-~~~~~~~~~~~~~~~~l-------~~~~ 94 (247)
.=|.|+|+||+.-....|..++.+++..||-|++|++-.-- .+....+ -+....++.+..-+.++ +..+
T Consensus 45 ~yPVilF~HG~~l~ns~Ys~lL~HIASHGfIVVAPQl~~~~---~p~~~~Ei~~aa~V~~WL~~gL~~~Lp~~V~~nl~k 121 (307)
T PF07224_consen 45 TYPVILFLHGFNLYNSFYSQLLAHIASHGFIVVAPQLYTLF---PPDGQDEIKSAASVINWLPEGLQHVLPENVEANLSK 121 (307)
T ss_pred CccEEEEeechhhhhHHHHHHHHHHhhcCeEEEechhhccc---CCCchHHHHHHHHHHHHHHhhhhhhCCCCcccccce
Confidence 34899999999999888999999999999999999986431 1211011 12223333333333333 3458
Q ss_pred EEEEEechhHHHHHHHHHhCCC--ceeEEEEecCC
Q 025885 95 VFLVGHDWGALIAWYFCLFRPD--RVKALVNMSVP 127 (247)
Q Consensus 95 ~~lvGhS~Gg~~a~~~a~~~p~--~v~~lv~~~~~ 127 (247)
+.++|||.||-.|..+|..+.- .+.++|-+++.
T Consensus 122 lal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV 156 (307)
T PF07224_consen 122 LALSGHSRGGKTAFALALGYATSLKFSALIGIDPV 156 (307)
T ss_pred EEEeecCCccHHHHHHHhcccccCchhheeccccc
Confidence 9999999999999999987742 47788877753
No 102
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=98.80 E-value=4.8e-08 Score=82.04 Aligned_cols=102 Identities=20% Similarity=0.223 Sum_probs=70.4
Q ss_pred CeEEEEcCCCCCh-hhHHHH---------HHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---C
Q 025885 25 PAVLFIHGFPELW-YSWRNQ---------LLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKL---G 91 (247)
Q Consensus 25 ~~vvllHG~~~~~-~~~~~~---------~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~l---~ 91 (247)
|+||..|++..+. ...... ...++++||.||..|.||.|.|....... ..+-.+|..++++.+ .
T Consensus 21 P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~~---~~~e~~D~~d~I~W~~~Qp 97 (272)
T PF02129_consen 21 PVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDPM---SPNEAQDGYDTIEWIAAQP 97 (272)
T ss_dssp EEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-TT---SHHHHHHHHHHHHHHHHCT
T ss_pred cEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCccccC---ChhHHHHHHHHHHHHHhCC
Confidence 7899999998653 212111 12388999999999999999998765321 334455666666655 3
Q ss_pred C--ceEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCC
Q 025885 92 I--HQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFP 129 (247)
Q Consensus 92 ~--~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~~ 129 (247)
. .+|.++|.|++|..++..|+..|..+++++...+...
T Consensus 98 ws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d 137 (272)
T PF02129_consen 98 WSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSD 137 (272)
T ss_dssp TEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SB
T ss_pred CCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCc
Confidence 3 3799999999999999999988889999998876543
No 103
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=98.79 E-value=1.5e-08 Score=81.76 Aligned_cols=91 Identities=23% Similarity=0.314 Sum_probs=63.0
Q ss_pred HHHHHHHHHHCCCEEEEeCCCCCCCCCCCC--CCCCCCHHHHHHHHHHHHHHh------CCceEEEEEechhHHHHHHHH
Q 025885 40 WRNQLLYLSSRGYRAIAPDLRGYGDTDAPP--SVTSYTALHLVGDLIGLLDKL------GIHQVFLVGHDWGALIAWYFC 111 (247)
Q Consensus 40 ~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~--~~~~~~~~~~~~~~~~~~~~l------~~~~~~lvGhS~Gg~~a~~~a 111 (247)
|......|+++||.|+.+|.||.+...... ...........+|+.+.++.+ ..+++.++|||+||.+++.++
T Consensus 3 f~~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~ 82 (213)
T PF00326_consen 3 FNWNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAA 82 (213)
T ss_dssp -SHHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHH
T ss_pred eeHHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhh
Confidence 446677888999999999999987432110 001111234466666666665 236899999999999999999
Q ss_pred HhCCCceeEEEEecCCCCC
Q 025885 112 LFRPDRVKALVNMSVPFPP 130 (247)
Q Consensus 112 ~~~p~~v~~lv~~~~~~~~ 130 (247)
..+|++++++|..++....
T Consensus 83 ~~~~~~f~a~v~~~g~~d~ 101 (213)
T PF00326_consen 83 TQHPDRFKAAVAGAGVSDL 101 (213)
T ss_dssp HHTCCGSSEEEEESE-SST
T ss_pred cccceeeeeeeccceecch
Confidence 9999999999988876543
No 104
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=98.77 E-value=3.7e-08 Score=86.25 Aligned_cols=125 Identities=22% Similarity=0.366 Sum_probs=90.3
Q ss_pred eEEEEeCCEEEEEEee----CCCCeEEEEcCCCCChhhHH------HHHHHHHHCCCEEEEeCCCCCCCCCCCCC-----
Q 025885 6 HTTVATNGINMHVASI----GTGPAVLFIHGFPELWYSWR------NQLLYLSSRGYRAIAPDLRGYGDTDAPPS----- 70 (247)
Q Consensus 6 ~~~~~~~g~~~~~~~~----g~~~~vvllHG~~~~~~~~~------~~~~~l~~~g~~v~~~d~~G~G~s~~~~~----- 70 (247)
+...+.||..+...+. +++|+|+|.||...++..|- .+.-.|+++||.|+.=+.||.-.|.+...
T Consensus 51 h~V~T~DgYiL~lhRIp~~~~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr~h~~l~~~~ 130 (403)
T KOG2624|consen 51 HEVTTEDGYILTLHRIPRGKKKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSRKHKKLSPSS 130 (403)
T ss_pred EEEEccCCeEEEEeeecCCCCCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcCcccchhhcccCCcC
Confidence 3344457775544432 45699999999999999993 34567889999999999999765543211
Q ss_pred ---CCCCCHHHHHH-HHHHHHHH----hCCceEEEEEechhHHHHHHHHHhCCC---ceeEEEEecCCCCC
Q 025885 71 ---VTSYTALHLVG-DLIGLLDK----LGIHQVFLVGHDWGALIAWYFCLFRPD---RVKALVNMSVPFPP 130 (247)
Q Consensus 71 ---~~~~~~~~~~~-~~~~~~~~----l~~~~~~lvGhS~Gg~~a~~~a~~~p~---~v~~lv~~~~~~~~ 130 (247)
.-.+++.+++. |+-+.++. .+.++++.||||.|+.....+++..|+ +|+.+++++++...
T Consensus 131 ~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~~~ 201 (403)
T KOG2624|consen 131 DKEFWDFSWHEMGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAAFP 201 (403)
T ss_pred CcceeecchhhhhhcCHHHHHHHHHHhccccceEEEEEEccchhheehhcccchhhhhhheeeeecchhhh
Confidence 11345555543 55555554 477899999999999999999988875 79999999876543
No 105
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.75 E-value=2.2e-07 Score=70.23 Aligned_cols=107 Identities=19% Similarity=0.227 Sum_probs=80.1
Q ss_pred eEEEEcCCCCCh--hhHHHHHHHHHHCCCEEEEeCCCCC-----CCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEE
Q 025885 26 AVLFIHGFPELW--YSWRNQLLYLSSRGYRAIAPDLRGY-----GDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVFLV 98 (247)
Q Consensus 26 ~vvllHG~~~~~--~~~~~~~~~l~~~g~~v~~~d~~G~-----G~s~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~lv 98 (247)
+|||-||-+.+- .....+...|+.+|+.|.-++++-. |.. +|+.....-...+...+.++.+.+...+.++-
T Consensus 16 tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~r-kPp~~~~t~~~~~~~~~aql~~~l~~gpLi~G 94 (213)
T COG3571 16 TILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRR-KPPPGSGTLNPEYIVAIAQLRAGLAEGPLIIG 94 (213)
T ss_pred EEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCC-CCcCccccCCHHHHHHHHHHHhcccCCceeec
Confidence 688999987664 4567788899999999999998643 322 23322333345566667777777766689999
Q ss_pred EechhHHHHHHHHHhCCCceeEEEEecCCCCCCCC
Q 025885 99 GHDWGALIAWYFCLFRPDRVKALVNMSVPFPPRNP 133 (247)
Q Consensus 99 GhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~~~~~~ 133 (247)
|+||||.++..++..-...|+++++++.|+.++.+
T Consensus 95 GkSmGGR~aSmvade~~A~i~~L~clgYPfhppGK 129 (213)
T COG3571 95 GKSMGGRVASMVADELQAPIDGLVCLGYPFHPPGK 129 (213)
T ss_pred cccccchHHHHHHHhhcCCcceEEEecCccCCCCC
Confidence 99999999999987765569999999999876553
No 106
>COG0400 Predicted esterase [General function prediction only]
Probab=98.74 E-value=4.1e-08 Score=78.72 Aligned_cols=106 Identities=20% Similarity=0.199 Sum_probs=72.3
Q ss_pred CCeEEEEcCCCCChhhHHHHHHHHHHCCCEEEEeCCCC--CCCC--CCCCCCCCCCH-------HHHHHHHHHHHHHhCC
Q 025885 24 GPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRG--YGDT--DAPPSVTSYTA-------LHLVGDLIGLLDKLGI 92 (247)
Q Consensus 24 ~~~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G--~G~s--~~~~~~~~~~~-------~~~~~~~~~~~~~l~~ 92 (247)
.|+||++||++++..++-.....+..+ +.++.|--+- .|.- -...+...++. ..+++.+....++.++
T Consensus 18 ~~~iilLHG~Ggde~~~~~~~~~~~P~-~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~~~~~gi 96 (207)
T COG0400 18 APLLILLHGLGGDELDLVPLPELILPN-ATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEELAEEYGI 96 (207)
T ss_pred CcEEEEEecCCCChhhhhhhhhhcCCC-CeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHHHHHhCC
Confidence 468999999999999888865555553 6776653221 1100 00011122222 3444455555666676
Q ss_pred --ceEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCC
Q 025885 93 --HQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFPP 130 (247)
Q Consensus 93 --~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~~~ 130 (247)
++++++|+|.||+++..+..++|+.++++|++++..+.
T Consensus 97 ~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~ 136 (207)
T COG0400 97 DSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPL 136 (207)
T ss_pred ChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCC
Confidence 68999999999999999999999999999999876544
No 107
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=98.74 E-value=2.1e-07 Score=79.85 Aligned_cols=99 Identities=25% Similarity=0.271 Sum_probs=63.3
Q ss_pred CeEEEEcCCCCChhhHHHHHHHHHHCCCEEEEeCCCCCCCCCC-CCC-----------------CCCCCHHHHHHHHHHH
Q 025885 25 PAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDA-PPS-----------------VTSYTALHLVGDLIGL 86 (247)
Q Consensus 25 ~~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~-~~~-----------------~~~~~~~~~~~~~~~~ 86 (247)
|.||.+||+++....|...+. ++.+||.|+++|.||+|..+. ... ...+-...+..|....
T Consensus 84 Pavv~~hGyg~~~~~~~~~~~-~a~~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ra 162 (320)
T PF05448_consen 84 PAVVQFHGYGGRSGDPFDLLP-WAAAGYAVLAMDVRGQGGRSPDYRGSSGGTLKGHITRGIDDNPEDYYYRRVYLDAVRA 162 (320)
T ss_dssp EEEEEE--TT--GGGHHHHHH-HHHTT-EEEEE--TTTSSSS-B-SSBSSS-SSSSTTTTTTS-TTT-HHHHHHHHHHHH
T ss_pred CEEEEecCCCCCCCCcccccc-cccCCeEEEEecCCCCCCCCCCccccCCCCCccHHhcCccCchHHHHHHHHHHHHHHH
Confidence 789999999999888877655 567799999999999993221 100 1111123444555555
Q ss_pred HHHh------CCceEEEEEechhHHHHHHHHHhCCCceeEEEEec
Q 025885 87 LDKL------GIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMS 125 (247)
Q Consensus 87 ~~~l------~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~ 125 (247)
++.+ ..+++.+.|.|+||.+++.+|+..| +|++++...
T Consensus 163 vd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~-rv~~~~~~v 206 (320)
T PF05448_consen 163 VDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP-RVKAAAADV 206 (320)
T ss_dssp HHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS-T-SEEEEES
T ss_pred HHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc-cccEEEecC
Confidence 5554 2358999999999999999999987 698888654
No 108
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.73 E-value=1e-08 Score=88.26 Aligned_cols=105 Identities=21% Similarity=0.354 Sum_probs=61.8
Q ss_pred CCCeEEEEcCCCCCh--hhHHH-HHHHHH-H--CCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH----HhC-
Q 025885 23 TGPAVLFIHGFPELW--YSWRN-QLLYLS-S--RGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLD----KLG- 91 (247)
Q Consensus 23 ~~~~vvllHG~~~~~--~~~~~-~~~~l~-~--~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~----~l~- 91 (247)
++|++|++|||.++. ..|.. +...+. . .++.||++|+.......-.. .......+.+.+..++. ..+
T Consensus 70 ~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~~Y~~--a~~n~~~vg~~la~~l~~L~~~~g~ 147 (331)
T PF00151_consen 70 SKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASNNYPQ--AVANTRLVGRQLAKFLSFLINNFGV 147 (331)
T ss_dssp TSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS-HHH--HHHHHHHHHHHHHHHHHHHHHHH--
T ss_pred CCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhccccccc--hhhhHHHHHHHHHHHHHHHHhhcCC
Confidence 368999999999887 45644 445443 3 47999999995332110000 00112223333333333 333
Q ss_pred -CceEEEEEechhHHHHHHHHHhCCC--ceeEEEEecCCCC
Q 025885 92 -IHQVFLVGHDWGALIAWYFCLFRPD--RVKALVNMSVPFP 129 (247)
Q Consensus 92 -~~~~~lvGhS~Gg~~a~~~a~~~p~--~v~~lv~~~~~~~ 129 (247)
.++++|||||+||.+|-.++..... +|.+++.++++.+
T Consensus 148 ~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP 188 (331)
T PF00151_consen 148 PPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGP 188 (331)
T ss_dssp -GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-T
T ss_pred ChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCcccc
Confidence 5689999999999999999988877 8999999987654
No 109
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=98.72 E-value=1.1e-07 Score=74.39 Aligned_cols=89 Identities=26% Similarity=0.332 Sum_probs=61.1
Q ss_pred EEEEcCCCCCh-hhHHHHHH-HHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEechhH
Q 025885 27 VLFIHGFPELW-YSWRNQLL-YLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVFLVGHDWGA 104 (247)
Q Consensus 27 vvllHG~~~~~-~~~~~~~~-~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~lvGhS~Gg 104 (247)
|+++||+.++. ..|....+ .+... ++|-.+|+ +.| +.+++...+.+.+.... ++++|||||+|+
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~-~~V~~~~~------~~P------~~~~W~~~l~~~i~~~~-~~~ilVaHSLGc 66 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENS-VRVEQPDW------DNP------DLDEWVQALDQAIDAID-EPTILVAHSLGC 66 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTS-EEEEEC--------TS--------HHHHHHHHHHCCHC-T-TTEEEEEETHHH
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCC-eEEecccc------CCC------CHHHHHHHHHHHHhhcC-CCeEEEEeCHHH
Confidence 68999998874 56776654 55544 78888777 222 45677777666666543 469999999999
Q ss_pred HHHHHHH-HhCCCceeEEEEecCCCC
Q 025885 105 LIAWYFC-LFRPDRVKALVNMSVPFP 129 (247)
Q Consensus 105 ~~a~~~a-~~~p~~v~~lv~~~~~~~ 129 (247)
..++.++ .....+|+++++++++..
T Consensus 67 ~~~l~~l~~~~~~~v~g~lLVAp~~~ 92 (171)
T PF06821_consen 67 LTALRWLAEQSQKKVAGALLVAPFDP 92 (171)
T ss_dssp HHHHHHHHHTCCSSEEEEEEES--SC
T ss_pred HHHHHHHhhcccccccEEEEEcCCCc
Confidence 9999999 777889999999998754
No 110
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=98.68 E-value=1.8e-07 Score=80.59 Aligned_cols=102 Identities=28% Similarity=0.412 Sum_probs=60.3
Q ss_pred CCeEEEEcCCCCChhh--------------H----HHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCC---CCCHHHHH--
Q 025885 24 GPAVLFIHGFPELWYS--------------W----RNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVT---SYTALHLV-- 80 (247)
Q Consensus 24 ~~~vvllHG~~~~~~~--------------~----~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~---~~~~~~~~-- 80 (247)
-|.||++||-++..+. + ..+...|+++||-|+++|.+|+|+........ .++...++
T Consensus 115 ~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYVvla~D~~g~GER~~~e~~~~~~~~~~~~la~~ 194 (390)
T PF12715_consen 115 FPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYVVLAPDALGFGERGDMEGAAQGSNYDCQALARN 194 (390)
T ss_dssp EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSEEEEE--TTSGGG-SSCCCTTTTS--HHHHHHH
T ss_pred CCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCCEEEEEccccccccccccccccccchhHHHHHHH
Confidence 4789999997554322 1 23467899999999999999999875433111 11212221
Q ss_pred -------------HHHHHHHHHh------CCceEEEEEechhHHHHHHHHHhCCCceeEEEEecC
Q 025885 81 -------------GDLIGLLDKL------GIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSV 126 (247)
Q Consensus 81 -------------~~~~~~~~~l------~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~ 126 (247)
-|....++.+ ..++|.++|+||||..+|.+|+.-+ +|++.|..+.
T Consensus 195 ~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaALDd-RIka~v~~~~ 258 (390)
T PF12715_consen 195 LLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAALDD-RIKATVANGY 258 (390)
T ss_dssp HHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH-T-T--EEEEES-
T ss_pred HHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHcch-hhHhHhhhhh
Confidence 1223345554 2358999999999999999999876 7888876543
No 111
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.67 E-value=7.9e-08 Score=77.70 Aligned_cols=102 Identities=20% Similarity=0.099 Sum_probs=79.3
Q ss_pred CCCeEEEEcCCCCChhhHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH-HhCCceEEEEEec
Q 025885 23 TGPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLD-KLGIHQVFLVGHD 101 (247)
Q Consensus 23 ~~~~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~lvGhS 101 (247)
..+.++++|=-++++..|+.+...|.. ...++++.+||.|..-..+ ...+++.+++.+...+. -+.-+++.+.|||
T Consensus 6 ~~~~L~cfP~AGGsa~~fr~W~~~lp~-~iel~avqlPGR~~r~~ep--~~~di~~Lad~la~el~~~~~d~P~alfGHS 82 (244)
T COG3208 6 ARLRLFCFPHAGGSASLFRSWSRRLPA-DIELLAVQLPGRGDRFGEP--LLTDIESLADELANELLPPLLDAPFALFGHS 82 (244)
T ss_pred CCceEEEecCCCCCHHHHHHHHhhCCc-hhheeeecCCCcccccCCc--ccccHHHHHHHHHHHhccccCCCCeeecccc
Confidence 456799999999999999999988865 4899999999999764433 35678888888877777 3445689999999
Q ss_pred hhHHHHHHHHHhCC---CceeEEEEecCC
Q 025885 102 WGALIAWYFCLFRP---DRVKALVNMSVP 127 (247)
Q Consensus 102 ~Gg~~a~~~a~~~p---~~v~~lv~~~~~ 127 (247)
|||++|.++|.+.- -...++.+.+..
T Consensus 83 mGa~lAfEvArrl~~~g~~p~~lfisg~~ 111 (244)
T COG3208 83 MGAMLAFEVARRLERAGLPPRALFISGCR 111 (244)
T ss_pred hhHHHHHHHHHHHHHcCCCcceEEEecCC
Confidence 99999999997642 125666665543
No 112
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=98.67 E-value=3.1e-07 Score=72.64 Aligned_cols=87 Identities=24% Similarity=0.371 Sum_probs=64.8
Q ss_pred EEEEcCCCCChhhHHH--HHHHHHHCC--CEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEech
Q 025885 27 VLFIHGFPELWYSWRN--QLLYLSSRG--YRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVFLVGHDW 102 (247)
Q Consensus 27 vvllHG~~~~~~~~~~--~~~~l~~~g--~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~lvGhS~ 102 (247)
||++|||.++..+... +...+++.+ ..+.+||++ .......+.+.++++....+.+.|||+|+
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~-------------~~p~~a~~~l~~~i~~~~~~~~~liGSSl 68 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLP-------------PFPEEAIAQLEQLIEELKPENVVLIGSSL 68 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCC-------------cCHHHHHHHHHHHHHhCCCCCeEEEEECh
Confidence 7899999998876543 345566543 456666664 13455667788888888877799999999
Q ss_pred hHHHHHHHHHhCCCceeEEEEecCCCC
Q 025885 103 GALIAWYFCLFRPDRVKALVNMSVPFP 129 (247)
Q Consensus 103 Gg~~a~~~a~~~p~~v~~lv~~~~~~~ 129 (247)
||..|..+|.+++ +++ |++++...
T Consensus 69 GG~~A~~La~~~~--~~a-vLiNPav~ 92 (187)
T PF05728_consen 69 GGFYATYLAERYG--LPA-VLINPAVR 92 (187)
T ss_pred HHHHHHHHHHHhC--CCE-EEEcCCCC
Confidence 9999999999986 444 77776554
No 113
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.65 E-value=1.1e-07 Score=82.15 Aligned_cols=102 Identities=23% Similarity=0.316 Sum_probs=83.5
Q ss_pred CeEEEEcCCCCChhhHHHHHHHHHHCCCE---EEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEec
Q 025885 25 PAVLFIHGFPELWYSWRNQLLYLSSRGYR---AIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVFLVGHD 101 (247)
Q Consensus 25 ~~vvllHG~~~~~~~~~~~~~~l~~~g~~---v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~lvGhS 101 (247)
-+++++||+..+...|..+...+...|+. ++.+++++. ....+ .....+++.+-+.+++...+.+++.|+|||
T Consensus 60 ~pivlVhG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~---~~~~~~ql~~~V~~~l~~~ga~~v~LigHS 135 (336)
T COG1075 60 EPIVLVHGLGGGYGNFLPLDYRLAILGWLTNGVYAFELSGG-DGTYS---LAVRGEQLFAYVDEVLAKTGAKKVNLIGHS 135 (336)
T ss_pred ceEEEEccCcCCcchhhhhhhhhcchHHHhccccccccccc-CCCcc---ccccHHHHHHHHHHHHhhcCCCceEEEeec
Confidence 48999999988888888887777777777 888888865 22111 234567777888888888899999999999
Q ss_pred hhHHHHHHHHHhCC--CceeEEEEecCCCCC
Q 025885 102 WGALIAWYFCLFRP--DRVKALVNMSVPFPP 130 (247)
Q Consensus 102 ~Gg~~a~~~a~~~p--~~v~~lv~~~~~~~~ 130 (247)
|||.+++.++...+ .+|+.++.+++|...
T Consensus 136 ~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~G 166 (336)
T COG1075 136 MGGLDSRYYLGVLGGANRVASVVTLGTPHHG 166 (336)
T ss_pred ccchhhHHHHhhcCccceEEEEEEeccCCCC
Confidence 99999999999888 899999999988754
No 114
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=98.64 E-value=1.2e-07 Score=77.11 Aligned_cols=103 Identities=18% Similarity=0.261 Sum_probs=60.6
Q ss_pred CeEEEEcCCCCChhhHHHHHHHHHHC--CCEEEEeCCCCCCCCCCCCCCCCCCHH----HHHHHHHHHHHHhCC--ceEE
Q 025885 25 PAVLFIHGFPELWYSWRNQLLYLSSR--GYRAIAPDLRGYGDTDAPPSVTSYTAL----HLVGDLIGLLDKLGI--HQVF 96 (247)
Q Consensus 25 ~~vvllHG~~~~~~~~~~~~~~l~~~--g~~v~~~d~~G~G~s~~~~~~~~~~~~----~~~~~~~~~~~~l~~--~~~~ 96 (247)
-.|||+||+.++..+|+.+...+... .+.-..+...++...... ...+++ .+++++.+.++.... .+++
T Consensus 5 hLvV~vHGL~G~~~d~~~~~~~l~~~~~~~~~~~i~~~~~~~n~~~---T~~gI~~~g~rL~~eI~~~~~~~~~~~~~Is 81 (217)
T PF05057_consen 5 HLVVFVHGLWGNPADMRYLKNHLEKIPEDLPNARIVVLGYSNNEFK---TFDGIDVCGERLAEEILEHIKDYESKIRKIS 81 (217)
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHHHhhhhcchhhhhhhcccccccc---cchhhHHHHHHHHHHHHHhccccccccccce
Confidence 47999999999999998887776651 122111122222111110 112233 444555555544444 3799
Q ss_pred EEEechhHHHHHHHHHh---CC----C-----ceeEEEEecCCCCC
Q 025885 97 LVGHDWGALIAWYFCLF---RP----D-----RVKALVNMSVPFPP 130 (247)
Q Consensus 97 lvGhS~Gg~~a~~~a~~---~p----~-----~v~~lv~~~~~~~~ 130 (247)
+||||+||.++..+... .+ + +...++.+++|+..
T Consensus 82 fIgHSLGGli~r~al~~~~~~~~~~~~~~~~~~~~~fitlatPH~G 127 (217)
T PF05057_consen 82 FIGHSLGGLIARYALGLLHDKPQYFPGFFQKIKPHNFITLATPHLG 127 (217)
T ss_pred EEEecccHHHHHHHHHHhhhccccccccccceeeeeEEEeCCCCCC
Confidence 99999999998766542 22 1 34456778888764
No 115
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.63 E-value=4.5e-08 Score=79.92 Aligned_cols=116 Identities=26% Similarity=0.401 Sum_probs=80.2
Q ss_pred CCEEEEEEe------eCCCCeEEEEcCCCCChhhHHHHHHHHHHCCCEEEEeCCCCCCCCCC----CCCC----------
Q 025885 12 NGINMHVAS------IGTGPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDA----PPSV---------- 71 (247)
Q Consensus 12 ~g~~~~~~~------~g~~~~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~----~~~~---------- 71 (247)
+|.+++-+- .|.-|.||-.||+.++...|..++..-+ .||.|+.+|.||.|.|+. ++..
T Consensus 65 ~g~rI~gwlvlP~~~~~~~P~vV~fhGY~g~~g~~~~~l~wa~-~Gyavf~MdvRGQg~~~~dt~~~p~~~s~pG~mtrG 143 (321)
T COG3458 65 GGARIKGWLVLPRHEKGKLPAVVQFHGYGGRGGEWHDMLHWAV-AGYAVFVMDVRGQGSSSQDTADPPGGPSDPGFMTRG 143 (321)
T ss_pred CCceEEEEEEeecccCCccceEEEEeeccCCCCCccccccccc-cceeEEEEecccCCCccccCCCCCCCCcCCceeEee
Confidence 566666441 1345899999999999999988776554 599999999999998743 1100
Q ss_pred -----CCCCHHHHHHHHHHHHHHh------CCceEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCC
Q 025885 72 -----TSYTALHLVGDLIGLLDKL------GIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFPP 130 (247)
Q Consensus 72 -----~~~~~~~~~~~~~~~~~~l------~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~~~ 130 (247)
..|-......|+..+++.+ ..+++.+.|.|.||.+++.+++..| ++++++.. .|+..
T Consensus 144 ilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~-rik~~~~~-~Pfl~ 211 (321)
T COG3458 144 ILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP-RIKAVVAD-YPFLS 211 (321)
T ss_pred cccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcCh-hhhccccc-ccccc
Confidence 0111222333444444433 4568999999999999999999988 78888754 45544
No 116
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=98.60 E-value=1.9e-06 Score=69.63 Aligned_cols=114 Identities=20% Similarity=0.260 Sum_probs=74.1
Q ss_pred EEEe-CCEEEEEEeeCC-------CCeEEEEcCCCCChhhHHHHHHHHHHCCCEEEEeCCCCC-CCCCCCCCCCCCCHHH
Q 025885 8 TVAT-NGINMHVASIGT-------GPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGY-GDTDAPPSVTSYTALH 78 (247)
Q Consensus 8 ~~~~-~g~~~~~~~~g~-------~~~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~-G~s~~~~~~~~~~~~~ 78 (247)
.+.+ +|.++++++.-+ .++||+-.||...-..+..++.+|+.+||+|+-+|..-| |.|+... ..++...
T Consensus 6 vi~~~~~~~I~vwet~P~~~~~~~~~tiliA~Gf~rrmdh~agLA~YL~~NGFhViRyDsl~HvGlSsG~I--~eftms~ 83 (294)
T PF02273_consen 6 VIRLEDGRQIRVWETRPKNNEPKRNNTILIAPGFARRMDHFAGLAEYLSANGFHVIRYDSLNHVGLSSGDI--NEFTMSI 83 (294)
T ss_dssp EEEETTTEEEEEEEE---TTS---S-EEEEE-TT-GGGGGGHHHHHHHHTTT--EEEE---B---------------HHH
T ss_pred eeEcCCCCEEEEeccCCCCCCcccCCeEEEecchhHHHHHHHHHHHHHhhCCeEEEeccccccccCCCCCh--hhcchHH
Confidence 3444 789999987542 479999999999999999999999999999999998766 8887765 5788888
Q ss_pred HHHHHHHHHHHh---CCceEEEEEechhHHHHHHHHHhCCCceeEEEEec
Q 025885 79 LVGDLIGLLDKL---GIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMS 125 (247)
Q Consensus 79 ~~~~~~~~~~~l---~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~ 125 (247)
..+++..+++.+ |..++.|+.-|.-|.+|+..|++- .+.-+|+.-
T Consensus 84 g~~sL~~V~dwl~~~g~~~~GLIAaSLSaRIAy~Va~~i--~lsfLitaV 131 (294)
T PF02273_consen 84 GKASLLTVIDWLATRGIRRIGLIAASLSARIAYEVAADI--NLSFLITAV 131 (294)
T ss_dssp HHHHHHHHHHHHHHTT---EEEEEETTHHHHHHHHTTTS----SEEEEES
T ss_pred hHHHHHHHHHHHHhcCCCcchhhhhhhhHHHHHHHhhcc--CcceEEEEe
Confidence 888888777776 778999999999999999999854 366666543
No 117
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=98.59 E-value=1e-07 Score=83.58 Aligned_cols=106 Identities=25% Similarity=0.262 Sum_probs=60.1
Q ss_pred CCeEEEEcCCCCChhhHHHHHHHHHHCCCEEEEeCCCCCCCC-CCC-C---------------C-----CCCC---C-H-
Q 025885 24 GPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDT-DAP-P---------------S-----VTSY---T-A- 76 (247)
Q Consensus 24 ~~~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s-~~~-~---------------~-----~~~~---~-~- 76 (247)
-|+|||-||++++...+..+...|+.+||-|+++|.|-.-.+ ... . . .... . .
T Consensus 100 ~PvvIFSHGlgg~R~~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (379)
T PF03403_consen 100 FPVVIFSHGLGGSRTSYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPEEEFE 179 (379)
T ss_dssp EEEEEEE--TT--TTTTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GGGHHH
T ss_pred CCEEEEeCCCCcchhhHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccchhHHH
Confidence 389999999999999999999999999999999999843111 000 0 0 0000 0 0
Q ss_pred ---HHH---HHHHHHHHHHh--------------------------CCceEEEEEechhHHHHHHHHHhCCCceeEEEEe
Q 025885 77 ---LHL---VGDLIGLLDKL--------------------------GIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNM 124 (247)
Q Consensus 77 ---~~~---~~~~~~~~~~l--------------------------~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~ 124 (247)
.++ +.++..+++.+ ..+++.++|||+||+.+...+... .++++.|++
T Consensus 180 ~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d-~r~~~~I~L 258 (379)
T PF03403_consen 180 LRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD-TRFKAGILL 258 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH--TT--EEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc-cCcceEEEe
Confidence 011 22333333322 134799999999999999888776 579999999
Q ss_pred cCCCCC
Q 025885 125 SVPFPP 130 (247)
Q Consensus 125 ~~~~~~ 130 (247)
++-..|
T Consensus 259 D~W~~P 264 (379)
T PF03403_consen 259 DPWMFP 264 (379)
T ss_dssp S---TT
T ss_pred CCcccC
Confidence 876543
No 118
>PRK10115 protease 2; Provisional
Probab=98.57 E-value=3.7e-07 Score=86.09 Aligned_cols=117 Identities=16% Similarity=0.153 Sum_probs=80.3
Q ss_pred eCCEEEEEE-e--e-----CCCCeEEEEcCCCCChh--hHHHHHHHHHHCCCEEEEeCCCCCCCCCC---CC---CCCCC
Q 025885 11 TNGINMHVA-S--I-----GTGPAVLFIHGFPELWY--SWRNQLLYLSSRGYRAIAPDLRGYGDTDA---PP---SVTSY 74 (247)
Q Consensus 11 ~~g~~~~~~-~--~-----g~~~~vvllHG~~~~~~--~~~~~~~~l~~~g~~v~~~d~~G~G~s~~---~~---~~~~~ 74 (247)
-||.++++. . . ++.|+||++||.++... .|......|.++||.|+.++.||-|.-.. .. .....
T Consensus 424 ~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~w~~~g~~~~k~~ 503 (686)
T PRK10115 424 RDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQWYEDGKFLKKKN 503 (686)
T ss_pred CCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCccCHHHHHhhhhhcCCC
Confidence 378887752 1 1 23589999999988764 46666677888999999999998654321 11 00122
Q ss_pred CHHHHHHHHHHHHHHh--CCceEEEEEechhHHHHHHHHHhCCCceeEEEEecCC
Q 025885 75 TALHLVGDLIGLLDKL--GIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVP 127 (247)
Q Consensus 75 ~~~~~~~~~~~~~~~l--~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~ 127 (247)
+.+++++-+..+++.- ..+++.+.|.|.||.++..++..+|++++++|...+.
T Consensus 504 ~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~ 558 (686)
T PRK10115 504 TFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPF 558 (686)
T ss_pred cHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCc
Confidence 3444333333333321 2358999999999999999999999999999986554
No 119
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.55 E-value=9.3e-07 Score=73.31 Aligned_cols=122 Identities=20% Similarity=0.246 Sum_probs=78.8
Q ss_pred EEEEeCCEEEEEEee---C---CCCeEEEEcCCCCChhhHHHHH--HHHHH-CCCEEEEeCCC-------CCCCCCCCCC
Q 025885 7 TTVATNGINMHVASI---G---TGPAVLFIHGFPELWYSWRNQL--LYLSS-RGYRAIAPDLR-------GYGDTDAPPS 70 (247)
Q Consensus 7 ~~~~~~g~~~~~~~~---g---~~~~vvllHG~~~~~~~~~~~~--~~l~~-~g~~v~~~d~~-------G~G~s~~~~~ 70 (247)
..+..+|.+.+|+-. + ..|.||.+||..++....++.. +.|++ .||-|+.||-- +.+.+..|.+
T Consensus 38 ~s~~~~g~~r~y~l~vP~g~~~~apLvv~LHG~~~sgag~~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~p~~ 117 (312)
T COG3509 38 ASFDVNGLKRSYRLYVPPGLPSGAPLVVVLHGSGGSGAGQLHGTGWDALADREGFLVAYPDGYDRAWNANGCGNWFGPAD 117 (312)
T ss_pred cccccCCCccceEEEcCCCCCCCCCEEEEEecCCCChHHhhcccchhhhhcccCcEEECcCccccccCCCcccccCCccc
Confidence 445667766666532 2 2468999999999887665553 44443 59999999622 2223322221
Q ss_pred -CCCC-CHHHHHHHHHHHHHHhCCc--eEEEEEechhHHHHHHHHHhCCCceeEEEEecCCC
Q 025885 71 -VTSY-TALHLVGDLIGLLDKLGIH--QVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPF 128 (247)
Q Consensus 71 -~~~~-~~~~~~~~~~~~~~~l~~~--~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~ 128 (247)
.... +...+.+-+..++.+.+++ +|++.|.|-||.++..++..+|+.+.++.++++..
T Consensus 118 ~~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 118 RRRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred ccCCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 0111 1222233334444455665 89999999999999999999999999998887654
No 120
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=98.55 E-value=1e-06 Score=68.63 Aligned_cols=99 Identities=23% Similarity=0.363 Sum_probs=67.6
Q ss_pred CCeEEEEcCCCCCh-----hhHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---CCc--
Q 025885 24 GPAVLFIHGFPELW-----YSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKL---GIH-- 93 (247)
Q Consensus 24 ~~~vvllHG~~~~~-----~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~l---~~~-- 93 (247)
.|..|++|--|... ..-..+...|.++||.++.+|+||.|.|..+-+. .+-+ .+|..+.++.+ ..+
T Consensus 28 ~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~fD~---GiGE-~~Da~aaldW~~~~hp~s~ 103 (210)
T COG2945 28 APIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEFDN---GIGE-LEDAAAALDWLQARHPDSA 103 (210)
T ss_pred CceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCcccC---Ccch-HHHHHHHHHHHHhhCCCch
Confidence 57788888654433 3345567788899999999999999999876532 2221 23344444444 332
Q ss_pred eEEEEEechhHHHHHHHHHhCCCceeEEEEecCC
Q 025885 94 QVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVP 127 (247)
Q Consensus 94 ~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~ 127 (247)
...|.|+|+|+.|++.+|.+.|+ ....+.+.++
T Consensus 104 ~~~l~GfSFGa~Ia~~la~r~~e-~~~~is~~p~ 136 (210)
T COG2945 104 SCWLAGFSFGAYIAMQLAMRRPE-ILVFISILPP 136 (210)
T ss_pred hhhhcccchHHHHHHHHHHhccc-ccceeeccCC
Confidence 24689999999999999999986 4555544443
No 121
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=98.53 E-value=2.9e-07 Score=74.04 Aligned_cols=93 Identities=22% Similarity=0.228 Sum_probs=58.1
Q ss_pred EEEEcCCCC---ChhhHHHHHHHHHH-CCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH----HH-----hCCc
Q 025885 27 VLFIHGFPE---LWYSWRNQLLYLSS-RGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLL----DK-----LGIH 93 (247)
Q Consensus 27 vvllHG~~~---~~~~~~~~~~~l~~-~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~----~~-----l~~~ 93 (247)
||++||.+- +......+...+++ .|+.|+.+|+|=. |. ....+..+|+.+.+ +. .+.+
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~-----p~----~~~p~~~~D~~~a~~~l~~~~~~~~~d~~ 71 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLA-----PE----APFPAALEDVKAAYRWLLKNADKLGIDPE 71 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---T-----TT----SSTTHHHHHHHHHHHHHHHTHHHHTEEEE
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeecccc-----cc----ccccccccccccceeeecccccccccccc
Confidence 789999753 33334455555554 7999999999832 22 12233444444433 33 2345
Q ss_pred eEEEEEechhHHHHHHHHHhCCC----ceeEEEEecCCC
Q 025885 94 QVFLVGHDWGALIAWYFCLFRPD----RVKALVNMSVPF 128 (247)
Q Consensus 94 ~~~lvGhS~Gg~~a~~~a~~~p~----~v~~lv~~~~~~ 128 (247)
+++|+|+|.||.+++.++....+ .+++++++++..
T Consensus 72 ~i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~ 110 (211)
T PF07859_consen 72 RIVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWT 110 (211)
T ss_dssp EEEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHS
T ss_pred ceEEeecccccchhhhhhhhhhhhcccchhhhhcccccc
Confidence 89999999999999999875433 489999998754
No 122
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=98.50 E-value=1.8e-06 Score=75.86 Aligned_cols=103 Identities=17% Similarity=0.182 Sum_probs=82.4
Q ss_pred CeEEEEcCCCCChhhH-HHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEechh
Q 025885 25 PAVLFIHGFPELWYSW-RNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVFLVGHDWG 103 (247)
Q Consensus 25 ~~vvllHG~~~~~~~~-~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~lvGhS~G 103 (247)
|+||++--+.+..... +.+++.|.+ |+.|+..|+.--+.... ....++.++.++-+.++++++|.+ ++++|.|+|
T Consensus 103 ~pvLiV~Pl~g~~~~L~RS~V~~Ll~-g~dVYl~DW~~p~~vp~--~~~~f~ldDYi~~l~~~i~~~G~~-v~l~GvCqg 178 (406)
T TIGR01849 103 PAVLIVAPMSGHYATLLRSTVEALLP-DHDVYITDWVNARMVPL--SAGKFDLEDYIDYLIEFIRFLGPD-IHVIAVCQP 178 (406)
T ss_pred CcEEEEcCCchHHHHHHHHHHHHHhC-CCcEEEEeCCCCCCCch--hcCCCCHHHHHHHHHHHHHHhCCC-CcEEEEchh
Confidence 7999999888665543 677888888 99999999975543321 225678899998899999999887 999999999
Q ss_pred HHHHHHHHHhC-----CCceeEEEEecCCCCCC
Q 025885 104 ALIAWYFCLFR-----PDRVKALVNMSVPFPPR 131 (247)
Q Consensus 104 g~~a~~~a~~~-----p~~v~~lv~~~~~~~~~ 131 (247)
|..++.+++.. |+++++++++++|....
T Consensus 179 G~~~laa~Al~a~~~~p~~~~sltlm~~PID~~ 211 (406)
T TIGR01849 179 AVPVLAAVALMAENEPPAQPRSMTLMGGPIDAR 211 (406)
T ss_pred hHHHHHHHHHHHhcCCCCCcceEEEEecCccCC
Confidence 99977766654 66799999999987653
No 123
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.49 E-value=1e-06 Score=72.38 Aligned_cols=105 Identities=15% Similarity=0.161 Sum_probs=65.1
Q ss_pred CCCeEEEEcCCCCChhhHHHHHHHH-HHCCC--EEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----CCceE
Q 025885 23 TGPAVLFIHGFPELWYSWRNQLLYL-SSRGY--RAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKL----GIHQV 95 (247)
Q Consensus 23 ~~~~vvllHG~~~~~~~~~~~~~~l-~~~g~--~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~l----~~~~~ 95 (247)
++..+||+|||..+...-..-+..+ ...++ .++.+.+|+.|.-..-.. ...+...-...+.++++.+ +.++|
T Consensus 17 ~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~-d~~~a~~s~~~l~~~L~~L~~~~~~~~I 95 (233)
T PF05990_consen 17 DKEVLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFY-DRESARFSGPALARFLRDLARAPGIKRI 95 (233)
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhh-hhhhHHHHHHHHHHHHHHHHhccCCceE
Confidence 5678999999998865542222222 22233 799999998875321100 1112233334455555544 56799
Q ss_pred EEEEechhHHHHHHHHHh----CC-----CceeEEEEecCCC
Q 025885 96 FLVGHDWGALIAWYFCLF----RP-----DRVKALVNMSVPF 128 (247)
Q Consensus 96 ~lvGhS~Gg~~a~~~a~~----~p-----~~v~~lv~~~~~~ 128 (247)
++++||||+.+....... .+ .++..+|++++..
T Consensus 96 ~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDi 137 (233)
T PF05990_consen 96 HILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDI 137 (233)
T ss_pred EEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCC
Confidence 999999999998877543 22 2577888876544
No 124
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=98.43 E-value=4.2e-06 Score=75.41 Aligned_cols=122 Identities=15% Similarity=0.086 Sum_probs=81.1
Q ss_pred EEEEeC----CEEEEEEeeC------CCCeEEEEcCCCCChhhHHHHHH-----------HHHH------CCCEEEEeCC
Q 025885 7 TTVATN----GINMHVASIG------TGPAVLFIHGFPELWYSWRNQLL-----------YLSS------RGYRAIAPDL 59 (247)
Q Consensus 7 ~~~~~~----g~~~~~~~~g------~~~~vvllHG~~~~~~~~~~~~~-----------~l~~------~g~~v~~~d~ 59 (247)
-+++++ +..++|+-.. +.|+||+++|.||.+..+..+.+ .+.. +-..++.+|.
T Consensus 50 Gy~~v~~~~~~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~~~~~~l~iDq 129 (462)
T PTZ00472 50 GYFDIPGNQTDKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWNNEAYVIYVDQ 129 (462)
T ss_pred EEEEeCCCCCCceEEEEEEEcCCCCCCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCcccccccCeEEEeC
Confidence 456663 4677776432 35899999999998876533221 1110 1257889997
Q ss_pred C-CCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-------CCceEEEEEechhHHHHHHHHHhC----------CCceeEE
Q 025885 60 R-GYGDTDAPPSVTSYTALHLVGDLIGLLDKL-------GIHQVFLVGHDWGALIAWYFCLFR----------PDRVKAL 121 (247)
Q Consensus 60 ~-G~G~s~~~~~~~~~~~~~~~~~~~~~~~~l-------~~~~~~lvGhS~Gg~~a~~~a~~~----------p~~v~~l 121 (247)
| |+|.|.........+.++.++|+.++++.+ +..+++|+|||+||..+..+|..- +-.++++
T Consensus 130 P~G~G~S~~~~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi 209 (462)
T PTZ00472 130 PAGVGFSYADKADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGL 209 (462)
T ss_pred CCCcCcccCCCCCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEE
Confidence 5 888875543223445677888888888753 346899999999999988887652 1136788
Q ss_pred EEecCCC
Q 025885 122 VNMSVPF 128 (247)
Q Consensus 122 v~~~~~~ 128 (247)
++-++-.
T Consensus 210 ~IGNg~~ 216 (462)
T PTZ00472 210 AVGNGLT 216 (462)
T ss_pred EEecccc
Confidence 7766543
No 125
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=98.43 E-value=8.1e-06 Score=69.25 Aligned_cols=105 Identities=18% Similarity=0.264 Sum_probs=73.5
Q ss_pred ceEEEEeCCEEEEEEeeC-----CCCeEEEEcCCCCChhhH-------HHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCC
Q 025885 5 EHTTVATNGINMHVASIG-----TGPAVLFIHGFPELWYSW-------RNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVT 72 (247)
Q Consensus 5 ~~~~~~~~g~~~~~~~~g-----~~~~vvllHG~~~~~~~~-------~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~ 72 (247)
+.-.+..|+..+.-.... ++.-||+.-|.++..+.- ..+.....+.+.+|+.+++||.|.|..+.
T Consensus 113 kRv~Iq~D~~~IDt~~I~~~~a~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~~--- 189 (365)
T PF05677_consen 113 KRVPIQYDGVKIDTMAIHQPEAKPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTGPP--- 189 (365)
T ss_pred eeEEEeeCCEEEEEEEeeCCCCCCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCCCC---
Confidence 334556677766544332 456799999987765541 12333333458899999999999997765
Q ss_pred CCCHHHHHHHHHHHHHHh-----C--CceEEEEEechhHHHHHHHHHhC
Q 025885 73 SYTALHLVGDLIGLLDKL-----G--IHQVFLVGHDWGALIAWYFCLFR 114 (247)
Q Consensus 73 ~~~~~~~~~~~~~~~~~l-----~--~~~~~lvGhS~Gg~~a~~~a~~~ 114 (247)
+.++++.|-.+.++.| | .+++++.|||+||.++...+..+
T Consensus 190 --s~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 190 --SRKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred --CHHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhc
Confidence 3577888877777766 2 25799999999999988866654
No 126
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=98.39 E-value=2.3e-06 Score=72.31 Aligned_cols=96 Identities=19% Similarity=0.271 Sum_probs=67.4
Q ss_pred CeEEEEcCCCCChhhHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHH-HHHHHHHhCC--ceEEEEEec
Q 025885 25 PAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGD-LIGLLDKLGI--HQVFLVGHD 101 (247)
Q Consensus 25 ~~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~-~~~~~~~l~~--~~~~lvGhS 101 (247)
..||++-|..+-.+. ..+..-++.||.|+..++||++.|...+. ..+....++. +.-.+..++. +.|++.|+|
T Consensus 244 ~LvIC~EGNAGFYEv--G~m~tP~~lgYsvLGwNhPGFagSTG~P~--p~n~~nA~DaVvQfAI~~Lgf~~edIilygWS 319 (517)
T KOG1553|consen 244 DLVICFEGNAGFYEV--GVMNTPAQLGYSVLGWNHPGFAGSTGLPY--PVNTLNAADAVVQFAIQVLGFRQEDIILYGWS 319 (517)
T ss_pred eEEEEecCCccceEe--eeecChHHhCceeeccCCCCccccCCCCC--cccchHHHHHHHHHHHHHcCCCccceEEEEee
Confidence 456777777664332 23333345699999999999999987652 2233333333 3444556664 579999999
Q ss_pred hhHHHHHHHHHhCCCceeEEEEec
Q 025885 102 WGALIAWYFCLFRPDRVKALVNMS 125 (247)
Q Consensus 102 ~Gg~~a~~~a~~~p~~v~~lv~~~ 125 (247)
.||.-+..+|..+|+ |+++|+-+
T Consensus 320 IGGF~~~waAs~YPd-VkavvLDA 342 (517)
T KOG1553|consen 320 IGGFPVAWAASNYPD-VKAVVLDA 342 (517)
T ss_pred cCCchHHHHhhcCCC-ceEEEeec
Confidence 999999999999996 99998754
No 127
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=98.38 E-value=5.1e-06 Score=65.94 Aligned_cols=90 Identities=22% Similarity=0.144 Sum_probs=67.4
Q ss_pred CCChhhHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-hCCceEEEEEechhHHHHHHHHH
Q 025885 34 PELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDK-LGIHQVFLVGHDWGALIAWYFCL 112 (247)
Q Consensus 34 ~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~lvGhS~Gg~~a~~~a~ 112 (247)
+++...|..+...+.. .+.|+++|++|++.+... ..+.+.+++.+...+.. .+..+++++|||+||.++..++.
T Consensus 9 ~~~~~~~~~~~~~l~~-~~~v~~~~~~g~~~~~~~----~~~~~~~~~~~~~~l~~~~~~~~~~l~g~s~Gg~~a~~~a~ 83 (212)
T smart00824 9 PSGPHEYARLAAALRG-RRDVSALPLPGFGPGEPL----PASADALVEAQAEAVLRAAGGRPFVLVGHSSGGLLAHAVAA 83 (212)
T ss_pred CCcHHHHHHHHHhcCC-CccEEEecCCCCCCCCCC----CCCHHHHHHHHHHHHHHhcCCCCeEEEEECHHHHHHHHHHH
Confidence 3677889999998876 589999999999865443 23566666655544443 34568999999999999998887
Q ss_pred h---CCCceeEEEEecCCC
Q 025885 113 F---RPDRVKALVNMSVPF 128 (247)
Q Consensus 113 ~---~p~~v~~lv~~~~~~ 128 (247)
. .++.+.++++++...
T Consensus 84 ~l~~~~~~~~~l~~~~~~~ 102 (212)
T smart00824 84 RLEARGIPPAAVVLLDTYP 102 (212)
T ss_pred HHHhCCCCCcEEEEEccCC
Confidence 5 456789998887543
No 128
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=98.37 E-value=3.2e-06 Score=66.24 Aligned_cols=97 Identities=21% Similarity=0.211 Sum_probs=74.6
Q ss_pred CeEEEEcCCCCChhhHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----CCceEEEEEe
Q 025885 25 PAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKL----GIHQVFLVGH 100 (247)
Q Consensus 25 ~~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~l----~~~~~~lvGh 100 (247)
..+||+-|=++-...=..+...|+++|+.|+.+|-+-|=.+.+ +.++.+.|+..++++. +.++++|+|.
T Consensus 3 t~~v~~SGDgGw~~~d~~~a~~l~~~G~~VvGvdsl~Yfw~~r-------tP~~~a~Dl~~~i~~y~~~w~~~~vvLiGY 75 (192)
T PF06057_consen 3 TLAVFFSGDGGWRDLDKQIAEALAKQGVPVVGVDSLRYFWSER-------TPEQTAADLARIIRHYRARWGRKRVVLIGY 75 (192)
T ss_pred EEEEEEeCCCCchhhhHHHHHHHHHCCCeEEEechHHHHhhhC-------CHHHHHHHHHHHHHHHHHHhCCceEEEEee
Confidence 3567888876655444577889999999999999887755543 3466777777777765 6779999999
Q ss_pred chhHHHHHHHHHhCC----CceeEEEEecCCC
Q 025885 101 DWGALIAWYFCLFRP----DRVKALVNMSVPF 128 (247)
Q Consensus 101 S~Gg~~a~~~a~~~p----~~v~~lv~~~~~~ 128 (247)
|+|+-+.-....+.| ++|..++++++..
T Consensus 76 SFGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~ 107 (192)
T PF06057_consen 76 SFGADVLPFIYNRLPAALRARVAQVVLLSPST 107 (192)
T ss_pred cCCchhHHHHHhhCCHHHHhheeEEEEeccCC
Confidence 999988888877776 4689999987643
No 129
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=98.35 E-value=5.3e-06 Score=67.33 Aligned_cols=105 Identities=24% Similarity=0.261 Sum_probs=72.8
Q ss_pred CeEEEEcCCCCChhhHHHHHHHHHHCC-----CEEEEeCCCCC----CCCCC----CC-----CCCCCCHHHHHHHHHHH
Q 025885 25 PAVLFIHGFPELWYSWRNQLLYLSSRG-----YRAIAPDLRGY----GDTDA----PP-----SVTSYTALHLVGDLIGL 86 (247)
Q Consensus 25 ~~vvllHG~~~~~~~~~~~~~~l~~~g-----~~v~~~d~~G~----G~s~~----~~-----~~~~~~~~~~~~~~~~~ 86 (247)
-|.||+||++++..+...++..|...+ --++.+|--|- |.=++ |. .....+..++...+..+
T Consensus 46 iPTIfIhGsgG~asS~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk~~ 125 (288)
T COG4814 46 IPTIFIHGSGGTASSLNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLKKA 125 (288)
T ss_pred cceEEEecCCCChhHHHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHHHH
Confidence 478999999999999999999988753 12455666552 21111 10 00112334455556655
Q ss_pred HHHh----CCceEEEEEechhHHHHHHHHHhCCC-----ceeEEEEecCCCC
Q 025885 87 LDKL----GIHQVFLVGHDWGALIAWYFCLFRPD-----RVKALVNMSVPFP 129 (247)
Q Consensus 87 ~~~l----~~~~~~lvGhS~Gg~~a~~~a~~~p~-----~v~~lv~~~~~~~ 129 (247)
+..| +++++.+|||||||.-...++..+.. .++.+|.+++|+.
T Consensus 126 msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN 177 (288)
T COG4814 126 MSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFN 177 (288)
T ss_pred HHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccccc
Confidence 5555 78899999999999998888876532 4899999999886
No 130
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=98.28 E-value=2.6e-06 Score=73.04 Aligned_cols=92 Identities=27% Similarity=0.277 Sum_probs=63.7
Q ss_pred CCeEEEEcCCCCChhhHHHHHHHHHHCCCEEEEeCCCCC--CCCCCCCCC-CCCC---HHHHHHHHHHHHHHh-------
Q 025885 24 GPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGY--GDTDAPPSV-TSYT---ALHLVGDLIGLLDKL------- 90 (247)
Q Consensus 24 ~~~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~--G~s~~~~~~-~~~~---~~~~~~~~~~~~~~l------- 90 (247)
-|.|++-||.+++...+..+.+.+++.||-|.++|.+|- |........ ..+. +.+-..|+..+++.|
T Consensus 71 ~PlvvlshG~Gs~~~~f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~~~sP 150 (365)
T COG4188 71 LPLVVLSHGSGSYVTGFAWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDALLQLTASP 150 (365)
T ss_pred CCeEEecCCCCCCccchhhhHHHHhhCceEEEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHHHHHhhcCc
Confidence 488999999999999999999999999999999999994 332221100 0011 112222333333322
Q ss_pred ------CCceEEEEEechhHHHHHHHHHhCC
Q 025885 91 ------GIHQVFLVGHDWGALIAWYFCLFRP 115 (247)
Q Consensus 91 ------~~~~~~lvGhS~Gg~~a~~~a~~~p 115 (247)
...+|.++|||+||..++.++.-..
T Consensus 151 ~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~ 181 (365)
T COG4188 151 ALAGRLDPQRVGVLGHSFGGYTAMELAGAEL 181 (365)
T ss_pred ccccccCccceEEEecccccHHHHHhccccc
Confidence 3457999999999999999876544
No 131
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=98.28 E-value=9.6e-06 Score=69.41 Aligned_cols=100 Identities=19% Similarity=0.139 Sum_probs=65.8
Q ss_pred CCeEEEEcCCC---CChhhH-HHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH---hC--Cce
Q 025885 24 GPAVLFIHGFP---ELWYSW-RNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDK---LG--IHQ 94 (247)
Q Consensus 24 ~~~vvllHG~~---~~~~~~-~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~---l~--~~~ 94 (247)
.|+||++||.+ ++.... ......+...|+.|+++|+|-.-+-.. ....++..+.+..+.++ ++ .++
T Consensus 79 ~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~~~-----p~~~~d~~~a~~~l~~~~~~~g~dp~~ 153 (312)
T COG0657 79 APVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEHPF-----PAALEDAYAAYRWLRANAAELGIDPSR 153 (312)
T ss_pred CcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCCCC-----CchHHHHHHHHHHHHhhhHhhCCCccc
Confidence 68999999974 333333 455566667899999999985433322 22344433333333333 34 468
Q ss_pred EEEEEechhHHHHHHHHHhCCC----ceeEEEEecCCC
Q 025885 95 VFLVGHDWGALIAWYFCLFRPD----RVKALVNMSVPF 128 (247)
Q Consensus 95 ~~lvGhS~Gg~~a~~~a~~~p~----~v~~lv~~~~~~ 128 (247)
+.+.|+|.||.++..++....+ .....+++++..
T Consensus 154 i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~ 191 (312)
T COG0657 154 IAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLL 191 (312)
T ss_pred eEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEeccc
Confidence 9999999999999998876543 357777776543
No 132
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=98.27 E-value=7e-06 Score=78.25 Aligned_cols=83 Identities=12% Similarity=0.171 Sum_probs=64.6
Q ss_pred HHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC--------------------CceEEEEEec
Q 025885 42 NQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLG--------------------IHQVFLVGHD 101 (247)
Q Consensus 42 ~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~l~--------------------~~~~~lvGhS 101 (247)
.....++.+||.|+..|.||.|.|+.... .+. .+-.+|..++++.+. -.+|.++|.|
T Consensus 270 ~~~~~~~~rGYaVV~~D~RGtg~SeG~~~--~~~-~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~S 346 (767)
T PRK05371 270 SLNDYFLPRGFAVVYVSGIGTRGSDGCPT--TGD-YQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKS 346 (767)
T ss_pred hHHHHHHhCCeEEEEEcCCCCCCCCCcCc--cCC-HHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEc
Confidence 34567888999999999999999987542 222 223556666666653 3589999999
Q ss_pred hhHHHHHHHHHhCCCceeEEEEecCC
Q 025885 102 WGALIAWYFCLFRPDRVKALVNMSVP 127 (247)
Q Consensus 102 ~Gg~~a~~~a~~~p~~v~~lv~~~~~ 127 (247)
+||.+++.+|...|+.++++|..++.
T Consensus 347 Y~G~~~~~aAa~~pp~LkAIVp~a~i 372 (767)
T PRK05371 347 YLGTLPNAVATTGVEGLETIIPEAAI 372 (767)
T ss_pred HHHHHHHHHHhhCCCcceEEEeeCCC
Confidence 99999999999999899999987644
No 133
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=98.25 E-value=1.9e-06 Score=74.78 Aligned_cols=106 Identities=15% Similarity=0.208 Sum_probs=81.5
Q ss_pred CCeEEEEcCCCCChhhH-----HHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEE
Q 025885 24 GPAVLFIHGFPELWYSW-----RNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVFLV 98 (247)
Q Consensus 24 ~~~vvllHG~~~~~~~~-----~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~lv 98 (247)
++|+|++|-+--..+.| ..++..|.++|+.|+.+|+++=..+.......+|-.+.+.+.+..+.+..+.++|.++
T Consensus 107 ~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~~~~~edYi~e~l~~aid~v~~itg~~~Inli 186 (445)
T COG3243 107 KRPLLIVPPWINKFYILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLAAKNLEDYILEGLSEAIDTVKDITGQKDINLI 186 (445)
T ss_pred CCceEeeccccCceeEEeCCCCccHHHHHHHcCCceEEEeccCchHhhhhccHHHHHHHHHHHHHHHHHHHhCcccccee
Confidence 57999999987776665 4578889999999999999865554433222233334455566667777789999999
Q ss_pred EechhHHHHHHHHHhCCCc-eeEEEEecCCCC
Q 025885 99 GHDWGALIAWYFCLFRPDR-VKALVNMSVPFP 129 (247)
Q Consensus 99 GhS~Gg~~a~~~a~~~p~~-v~~lv~~~~~~~ 129 (247)
|+|.||.++..+++.++.+ |++++++.++..
T Consensus 187 GyCvGGtl~~~ala~~~~k~I~S~T~lts~~D 218 (445)
T COG3243 187 GYCVGGTLLAAALALMAAKRIKSLTLLTSPVD 218 (445)
T ss_pred eEecchHHHHHHHHhhhhcccccceeeecchh
Confidence 9999999999999988887 999998877643
No 134
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.19 E-value=4e-06 Score=67.25 Aligned_cols=112 Identities=20% Similarity=0.325 Sum_probs=74.1
Q ss_pred eCCEEEEEEee---CCCCeEEEEcCC-CCChhhHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCC-CCCCCHHHHHH-HHH
Q 025885 11 TNGINMHVASI---GTGPAVLFIHGF-PELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPS-VTSYTALHLVG-DLI 84 (247)
Q Consensus 11 ~~g~~~~~~~~---g~~~~vvllHG~-~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~-~~~~~~~~~~~-~~~ 84 (247)
.||..+..... ++.+-.|++-|. +--...+++++..++++||.|...|+||.|.|+.+.. ...+...+++. |+.
T Consensus 13 ~DG~~l~~~~~pA~~~~~g~~~va~a~Gv~~~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~DwA~~D~~ 92 (281)
T COG4757 13 PDGYSLPGQRFPADGKASGRLVVAGATGVGQYFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQWRYLDWARLDFP 92 (281)
T ss_pred CCCccCccccccCCCCCCCcEEecccCCcchhHhHHHHHHhhccCceEEEEecccccCCCccccccCccchhhhhhcchH
Confidence 36666654433 333434445544 4445667899999999999999999999999976532 13456666653 666
Q ss_pred HHHHHh----CCceEEEEEechhHHHHHHHHHhCCCceeEEEEe
Q 025885 85 GLLDKL----GIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNM 124 (247)
Q Consensus 85 ~~~~~l----~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~ 124 (247)
+.++.+ ...+.+.||||+||.+.-.+.. +| +..+....
T Consensus 93 aal~~~~~~~~~~P~y~vgHS~GGqa~gL~~~-~~-k~~a~~vf 134 (281)
T COG4757 93 AALAALKKALPGHPLYFVGHSFGGQALGLLGQ-HP-KYAAFAVF 134 (281)
T ss_pred HHHHHHHhhCCCCceEEeeccccceeeccccc-Cc-ccceeeEe
Confidence 666655 3457999999999988665543 34 44444433
No 135
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=98.17 E-value=5.2e-05 Score=63.90 Aligned_cols=110 Identities=18% Similarity=0.240 Sum_probs=66.2
Q ss_pred CEEEEEEeeC--CCCeEEEEcCCCCChhh---HHHHHHHHHHCCCEEEEeCCC----CCCCCCCCCCCCCCCHHHHHHHH
Q 025885 13 GINMHVASIG--TGPAVLFIHGFPELWYS---WRNQLLYLSSRGYRAIAPDLR----GYGDTDAPPSVTSYTALHLVGDL 83 (247)
Q Consensus 13 g~~~~~~~~g--~~~~vvllHG~~~~~~~---~~~~~~~l~~~g~~v~~~d~~----G~G~s~~~~~~~~~~~~~~~~~~ 83 (247)
-..+.|...+ ....|||+-|.++.-.. ...+++.|.+.+|.|+-+-++ |+|.+ +.++-++||
T Consensus 20 ~~afe~~~~~~~~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~~---------SL~~D~~eI 90 (303)
T PF08538_consen 20 LVAFEFTSSSSSAPNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGTS---------SLDRDVEEI 90 (303)
T ss_dssp TEEEEEEEE-TTSSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S-----------HHHHHHHH
T ss_pred CeEEEecCCCCCCCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCcc---------hhhhHHHHH
Confidence 3444444444 24579999998876543 567788887789999998765 45543 455556666
Q ss_pred HHHHHHh--------CCceEEEEEechhHHHHHHHHHhCC-----CceeEEEEecCCCCCC
Q 025885 84 IGLLDKL--------GIHQVFLVGHDWGALIAWYFCLFRP-----DRVKALVNMSVPFPPR 131 (247)
Q Consensus 84 ~~~~~~l--------~~~~~~lvGhS~Gg~~a~~~a~~~p-----~~v~~lv~~~~~~~~~ 131 (247)
.++++++ +.++|+|+|||-|+.-+++++.... ..|+++|+-++.....
T Consensus 91 ~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDRE 151 (303)
T PF08538_consen 91 AQLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDRE 151 (303)
T ss_dssp HHHHHHHHHHS------S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TT
T ss_pred HHHHHHHHHhhccccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChh
Confidence 6666654 3468999999999999999987652 5799999988765543
No 136
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=98.16 E-value=2.7e-05 Score=59.94 Aligned_cols=92 Identities=14% Similarity=0.096 Sum_probs=63.4
Q ss_pred CeEEEEcCCCCCh-hhHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEechh
Q 025885 25 PAVLFIHGFPELW-YSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVFLVGHDWG 103 (247)
Q Consensus 25 ~~vvllHG~~~~~-~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~lvGhS~G 103 (247)
+.+|++||+.+|. ..|...-+.-. -.+-.+++. +......+++++.+.+.+... .++++||+||+|
T Consensus 3 ~~~lIVpG~~~Sg~~HWq~~we~~l---~~a~rveq~---------~w~~P~~~dWi~~l~~~v~a~-~~~~vlVAHSLG 69 (181)
T COG3545 3 TDVLIVPGYGGSGPNHWQSRWESAL---PNARRVEQD---------DWEAPVLDDWIARLEKEVNAA-EGPVVLVAHSLG 69 (181)
T ss_pred ceEEEecCCCCCChhHHHHHHHhhC---ccchhcccC---------CCCCCCHHHHHHHHHHHHhcc-CCCeEEEEeccc
Confidence 5689999998876 34654432211 112222221 112335677777777777766 456999999999
Q ss_pred HHHHHHHHHhCCCceeEEEEecCCCC
Q 025885 104 ALIAWYFCLFRPDRVKALVNMSVPFP 129 (247)
Q Consensus 104 g~~a~~~a~~~p~~v~~lv~~~~~~~ 129 (247)
+.++..++......|++++++++|..
T Consensus 70 c~~v~h~~~~~~~~V~GalLVAppd~ 95 (181)
T COG3545 70 CATVAHWAEHIQRQVAGALLVAPPDV 95 (181)
T ss_pred HHHHHHHHHhhhhccceEEEecCCCc
Confidence 99999999887668999999998764
No 137
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=98.15 E-value=4.7e-06 Score=68.85 Aligned_cols=51 Identities=25% Similarity=0.395 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHh-CCc--eEEEEEechhHHHHHHHHHhCCCceeEEEEecCCC
Q 025885 78 HLVGDLIGLLDKL-GIH--QVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPF 128 (247)
Q Consensus 78 ~~~~~~~~~~~~l-~~~--~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~ 128 (247)
-+.++|...++.. ... +..+.|+||||..|+.++.++|+.+.+++.+|+..
T Consensus 97 ~l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~ 150 (251)
T PF00756_consen 97 FLTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGAL 150 (251)
T ss_dssp HHHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEES
T ss_pred ehhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCccc
Confidence 3445666666654 322 27999999999999999999999999999998654
No 138
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=98.12 E-value=3e-05 Score=68.89 Aligned_cols=104 Identities=19% Similarity=0.243 Sum_probs=64.3
Q ss_pred CCeEEEEcCCCCCh-hhHHHHHHHHHHCCC----EEEEeCCCCCC-CCCCCCCCCCCCHHHHHHHHHHHHHHh-----CC
Q 025885 24 GPAVLFIHGFPELW-YSWRNQLLYLSSRGY----RAIAPDLRGYG-DTDAPPSVTSYTALHLVGDLIGLLDKL-----GI 92 (247)
Q Consensus 24 ~~~vvllHG~~~~~-~~~~~~~~~l~~~g~----~v~~~d~~G~G-~s~~~~~~~~~~~~~~~~~~~~~~~~l-----~~ 92 (247)
-|.|+|+||-.-.. ..-...+..|.++|. .++.+|..... ++..-.. ...-...+.+++.-.+++. ..
T Consensus 209 ~PvlyllDG~~w~~~~~~~~~ld~li~~g~i~P~ivV~id~~~~~~R~~el~~-~~~f~~~l~~eLlP~I~~~y~~~~d~ 287 (411)
T PRK10439 209 RPLAILLDGQFWAESMPVWPALDSLTHRGQLPPAVYLLIDAIDTTHRSQELPC-NADFWLAVQQELLPQVRAIAPFSDDA 287 (411)
T ss_pred CCEEEEEECHHhhhcCCHHHHHHHHHHcCCCCceEEEEECCCCcccccccCCc-hHHHHHHHHHHHHHHHHHhCCCCCCc
Confidence 37888999953111 112234555555553 46777753211 1110000 0111234456666666654 23
Q ss_pred ceEEEEEechhHHHHHHHHHhCCCceeEEEEecCCC
Q 025885 93 HQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPF 128 (247)
Q Consensus 93 ~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~ 128 (247)
++.+|.|+||||..|+.++.++|+++.+++.+++.+
T Consensus 288 ~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ 323 (411)
T PRK10439 288 DRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSF 323 (411)
T ss_pred cceEEEEEChHHHHHHHHHHhCcccccEEEEeccce
Confidence 468999999999999999999999999999998764
No 139
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=98.11 E-value=3.6e-05 Score=68.05 Aligned_cols=82 Identities=26% Similarity=0.448 Sum_probs=58.8
Q ss_pred hHHHHHHHHHHCCCEE----E-E-eCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---CCceEEEEEechhHHHHHH
Q 025885 39 SWRNQLLYLSSRGYRA----I-A-PDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKL---GIHQVFLVGHDWGALIAWY 109 (247)
Q Consensus 39 ~~~~~~~~l~~~g~~v----~-~-~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~l---~~~~~~lvGhS~Gg~~a~~ 109 (247)
.|..+++.|.+.||.. . + +|+|- + +. ..+.....+...++.. ..++|+||||||||.++..
T Consensus 66 ~~~~li~~L~~~GY~~~~~l~~~pYDWR~---~--~~-----~~~~~~~~lk~~ie~~~~~~~~kv~li~HSmGgl~~~~ 135 (389)
T PF02450_consen 66 YFAKLIENLEKLGYDRGKDLFAAPYDWRL---S--PA-----ERDEYFTKLKQLIEEAYKKNGKKVVLIAHSMGGLVARY 135 (389)
T ss_pred hHHHHHHHHHhcCcccCCEEEEEeechhh---c--hh-----hHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCchHHHH
Confidence 7999999999888752 2 3 57762 1 11 2234444555555443 3578999999999999999
Q ss_pred HHHhCCC------ceeEEEEecCCCCC
Q 025885 110 FCLFRPD------RVKALVNMSVPFPP 130 (247)
Q Consensus 110 ~a~~~p~------~v~~lv~~~~~~~~ 130 (247)
+....+. .|+++|.+++|+..
T Consensus 136 fl~~~~~~~W~~~~i~~~i~i~~p~~G 162 (389)
T PF02450_consen 136 FLQWMPQEEWKDKYIKRFISIGTPFGG 162 (389)
T ss_pred HHHhccchhhHHhhhhEEEEeCCCCCC
Confidence 9888743 59999999998764
No 140
>PRK04940 hypothetical protein; Provisional
Probab=98.08 E-value=2.9e-05 Score=60.63 Aligned_cols=89 Identities=20% Similarity=0.309 Sum_probs=50.2
Q ss_pred EEEEcCCCCChhhHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---C-CceEEEEEech
Q 025885 27 VLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKL---G-IHQVFLVGHDW 102 (247)
Q Consensus 27 vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~l---~-~~~~~lvGhS~ 102 (247)
||++|||.++..+=..-+..+. .+.||.+-+-.+ ........+.+.+.+..+ + .+++.|||+|+
T Consensus 2 IlYlHGF~SS~~S~~~Ka~~l~-----~~~p~~~~~~l~-------~~~P~~a~~~l~~~i~~~~~~~~~~~~~liGSSL 69 (180)
T PRK04940 2 IIYLHGFDSTSPGNHEKVLQLQ-----FIDPDVRLISYS-------TLHPKHDMQHLLKEVDKMLQLSDDERPLICGVGL 69 (180)
T ss_pred EEEeCCCCCCCCccHHHHHhhe-----eeCCCCeEEECC-------CCCHHHHHHHHHHHHHHhhhccCCCCcEEEEeCh
Confidence 7899999998877111122221 112332222111 012233333444444431 1 25799999999
Q ss_pred hHHHHHHHHHhCCCceeEEEEecCCCCC
Q 025885 103 GALIAWYFCLFRPDRVKALVNMSVPFPP 130 (247)
Q Consensus 103 Gg~~a~~~a~~~p~~v~~lv~~~~~~~~ 130 (247)
||..|..+|.++. ++ .|++++...|
T Consensus 70 GGyyA~~La~~~g--~~-aVLiNPAv~P 94 (180)
T PRK04940 70 GGYWAERIGFLCG--IR-QVIFNPNLFP 94 (180)
T ss_pred HHHHHHHHHHHHC--CC-EEEECCCCCh
Confidence 9999999999986 54 4556665443
No 141
>COG4099 Predicted peptidase [General function prediction only]
Probab=98.07 E-value=1.8e-05 Score=65.77 Aligned_cols=101 Identities=19% Similarity=0.247 Sum_probs=61.6
Q ss_pred CeEEEEcCCCCChhhHHHHHH--------HHHHCCCEEEEeCCC-CCCCCCCCCCCCCCCHHHHHHHHH-HHHHHhCCc-
Q 025885 25 PAVLFIHGFPELWYSWRNQLL--------YLSSRGYRAIAPDLR-GYGDTDAPPSVTSYTALHLVGDLI-GLLDKLGIH- 93 (247)
Q Consensus 25 ~~vvllHG~~~~~~~~~~~~~--------~l~~~g~~v~~~d~~-G~G~s~~~~~~~~~~~~~~~~~~~-~~~~~l~~~- 93 (247)
|.+||+||.++.+..-+.... ..-+.+|-|++|.+- =+..++... ..-.....+-+. .+.++.+++
T Consensus 192 PLvlfLHgagq~g~dn~~~l~sg~gaiawa~pedqcfVlAPQy~~if~d~e~~t---~~~l~~~idli~~vlas~ynID~ 268 (387)
T COG4099 192 PLVLFLHGAGQGGSDNDKVLSSGIGAIAWAGPEDQCFVLAPQYNPIFADSEEKT---LLYLIEKIDLILEVLASTYNIDR 268 (387)
T ss_pred cEEEEEecCCCCCchhhhhhhcCccceeeecccCceEEEccccccccccccccc---chhHHHHHHHHHHHHhhccCccc
Confidence 889999999887665433221 111223445565521 122222211 111122223333 233445554
Q ss_pred -eEEEEEechhHHHHHHHHHhCCCceeEEEEecCCC
Q 025885 94 -QVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPF 128 (247)
Q Consensus 94 -~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~ 128 (247)
+|+++|.|+||..+|.++.++|+.+.+.+++++..
T Consensus 269 sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~~ 304 (387)
T COG4099 269 SRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGGG 304 (387)
T ss_pred ceEEEEeecCcchhhHHHHHhCchhhheeeeecCCC
Confidence 79999999999999999999999999999998754
No 142
>PLN02606 palmitoyl-protein thioesterase
Probab=98.06 E-value=2.7e-05 Score=65.42 Aligned_cols=102 Identities=19% Similarity=0.199 Sum_probs=65.8
Q ss_pred CCCeEEEEcCCCC--ChhhHHHHHHHHHH-CCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH---hCCceEE
Q 025885 23 TGPAVLFIHGFPE--LWYSWRNQLLYLSS-RGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDK---LGIHQVF 96 (247)
Q Consensus 23 ~~~~vvllHG~~~--~~~~~~~~~~~l~~-~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~---l~~~~~~ 96 (247)
...|||+.||.++ +...+..+.+.+.+ .|+-+..+.+ |-+. ... .-....+.++.+.+.+.. +. +-+.
T Consensus 25 ~~~PvViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~i-g~~~---~~s-~~~~~~~Qv~~vce~l~~~~~L~-~G~n 98 (306)
T PLN02606 25 LSVPFVLFHGFGGECSNGKVSNLTQFLINHSGYPGTCVEI-GNGV---QDS-LFMPLRQQASIACEKIKQMKELS-EGYN 98 (306)
T ss_pred CCCCEEEECCCCcccCCchHHHHHHHHHhCCCCCeEEEEE-CCCc---ccc-cccCHHHHHHHHHHHHhcchhhc-CceE
Confidence 3568999999994 44567777777753 3665554442 2121 110 111233333333333332 22 3499
Q ss_pred EEEechhHHHHHHHHHhCCC--ceeEEEEecCCCCC
Q 025885 97 LVGHDWGALIAWYFCLFRPD--RVKALVNMSVPFPP 130 (247)
Q Consensus 97 lvGhS~Gg~~a~~~a~~~p~--~v~~lv~~~~~~~~ 130 (247)
++|+|.||.++..++.+.|+ .|+.+|.+++|+..
T Consensus 99 aIGfSQGglflRa~ierc~~~p~V~nlISlggph~G 134 (306)
T PLN02606 99 IVAESQGNLVARGLIEFCDNAPPVINYVSLGGPHAG 134 (306)
T ss_pred EEEEcchhHHHHHHHHHCCCCCCcceEEEecCCcCC
Confidence 99999999999999999877 49999999998754
No 143
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.06 E-value=4.4e-05 Score=70.84 Aligned_cols=102 Identities=22% Similarity=0.287 Sum_probs=64.3
Q ss_pred CCeEEEEcCCCCChhhHHHHHHHHHH----------------CCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 025885 24 GPAVLFIHGFPELWYSWRNQLLYLSS----------------RGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLL 87 (247)
Q Consensus 24 ~~~vvllHG~~~~~~~~~~~~~~l~~----------------~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~ 87 (247)
|-||+|++|..|+..+-|.++..... ..|+.+++|+-+- .. ........+.++-+.+.+
T Consensus 89 GIPVLFIPGNAGSyKQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnEe----~t-Am~G~~l~dQtEYV~dAI 163 (973)
T KOG3724|consen 89 GIPVLFIPGNAGSYKQVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNEE----FT-AMHGHILLDQTEYVNDAI 163 (973)
T ss_pred CceEEEecCCCCchHHHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccch----hh-hhccHhHHHHHHHHHHHH
Confidence 67999999999999888887665442 1245556665321 00 001122334444444333
Q ss_pred HHh-----C--------CceEEEEEechhHHHHHHHHHh---CCCceeEEEEecCCCCC
Q 025885 88 DKL-----G--------IHQVFLVGHDWGALIAWYFCLF---RPDRVKALVNMSVPFPP 130 (247)
Q Consensus 88 ~~l-----~--------~~~~~lvGhS~Gg~~a~~~a~~---~p~~v~~lv~~~~~~~~ 130 (247)
+.. + .+.|++|||||||.+|...+.. .+..|..++.+++|+..
T Consensus 164 k~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITlssPH~a 222 (973)
T KOG3724|consen 164 KYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLSSPHAA 222 (973)
T ss_pred HHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhcCcccC
Confidence 321 2 2359999999999999888754 34568888888888753
No 144
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=98.02 E-value=3e-05 Score=70.33 Aligned_cols=118 Identities=19% Similarity=0.204 Sum_probs=81.5
Q ss_pred CCEEEEEEee-----CCCCeEEEEcCCCCChh---hH--HHHHH---HHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHH
Q 025885 12 NGINMHVASI-----GTGPAVLFIHGFPELWY---SW--RNQLL---YLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALH 78 (247)
Q Consensus 12 ~g~~~~~~~~-----g~~~~vvllHG~~~~~~---~~--~~~~~---~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~ 78 (247)
||++|+.... |+.|+++..+-+|=... .+ ....+ .++.+||.||..|.||.|.|+..-+.....-.+
T Consensus 28 DGvrL~~dIy~Pa~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~SeG~~~~~~~~E~~ 107 (563)
T COG2936 28 DGVRLAADIYRPAGAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGGSEGVFDPESSREAE 107 (563)
T ss_pred CCeEEEEEEEccCCCCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccccCCcccceecccccc
Confidence 8999875532 34578888883333222 11 22233 577889999999999999998765322111222
Q ss_pred HHHHHHHHHHHhCC--ceEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCC
Q 025885 79 LVGDLIGLLDKLGI--HQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFP 129 (247)
Q Consensus 79 ~~~~~~~~~~~l~~--~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~~ 129 (247)
-..|+.+.+..... .+|...|.|++|...+.+|+.+|..+++++..++...
T Consensus 108 Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D 160 (563)
T COG2936 108 DGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVD 160 (563)
T ss_pred chhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCchheeecccccccc
Confidence 23466666666544 4799999999999999999999988999988766543
No 145
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.99 E-value=0.0003 Score=57.20 Aligned_cols=122 Identities=12% Similarity=0.154 Sum_probs=83.8
Q ss_pred ceEEEEeCCEEEEEEeeC--------CCCeEEEEcCCCCChhhHHHHHHHHHHC---CCEEEEeCCCCCCCCC---CC--
Q 025885 5 EHTTVATNGINMHVASIG--------TGPAVLFIHGFPELWYSWRNQLLYLSSR---GYRAIAPDLRGYGDTD---AP-- 68 (247)
Q Consensus 5 ~~~~~~~~g~~~~~~~~g--------~~~~vvllHG~~~~~~~~~~~~~~l~~~---g~~v~~~d~~G~G~s~---~~-- 68 (247)
+.++++.+|...+....+ +++.++.+.|.||...-+..+...|... ...++.+...||-.-. ..
T Consensus 2 ~e~~~~~~gl~~si~~~~~~v~~~~~~~~li~~IpGNPG~~gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~ 81 (301)
T KOG3975|consen 2 TEKEYTKSGLPTSILTLKPWVTKSGEDKPLIVWIPGNPGLLGFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDH 81 (301)
T ss_pred cceeeeecCCcccceeeeeeeccCCCCceEEEEecCCCCchhHHHHHHHHHHHhcccccceeEEeccccccCCccccccc
Confidence 455666666665554333 3577889999999999888888777643 2558888777774321 11
Q ss_pred --CCCCCCCHHHHHHHHHHHHHHhCC--ceEEEEEechhHHHHHHHHHhC-C-CceeEEEEecC
Q 025885 69 --PSVTSYTALHLVGDLIGLLDKLGI--HQVFLVGHDWGALIAWYFCLFR-P-DRVKALVNMSV 126 (247)
Q Consensus 69 --~~~~~~~~~~~~~~~~~~~~~l~~--~~~~lvGhS~Gg~~a~~~a~~~-p-~~v~~lv~~~~ 126 (247)
.....++.++.++.-.++++..-. .+++++|||.|+.+.+.+.-.. + -.|.+++++-+
T Consensus 82 s~~~~eifsL~~QV~HKlaFik~~~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFP 145 (301)
T KOG3975|consen 82 SHTNEEIFSLQDQVDHKLAFIKEYVPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFP 145 (301)
T ss_pred ccccccccchhhHHHHHHHHHHHhCCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecc
Confidence 112356777778777788877643 4899999999999999887632 2 24777777644
No 146
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=97.97 E-value=2.3e-05 Score=61.87 Aligned_cols=103 Identities=18% Similarity=0.139 Sum_probs=65.4
Q ss_pred CCCeEEEEcCCC---CChhhHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-CCceEEEE
Q 025885 23 TGPAVLFIHGFP---ELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKL-GIHQVFLV 98 (247)
Q Consensus 23 ~~~~vvllHG~~---~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~lv 98 (247)
..+..||+||.- ++....-..+..+.++||+|..++ |+.+..... -.-...+...-+.-+++.. +.+.+.+-
T Consensus 66 ~~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasvg---Y~l~~q~ht-L~qt~~~~~~gv~filk~~~n~k~l~~g 141 (270)
T KOG4627|consen 66 QAKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASVG---YNLCPQVHT-LEQTMTQFTHGVNFILKYTENTKVLTFG 141 (270)
T ss_pred CccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEec---cCcCccccc-HHHHHHHHHHHHHHHHHhcccceeEEEc
Confidence 368899999962 333333445666667899999875 444432210 0112233333444445544 34568899
Q ss_pred EechhHHHHHHHHHh-CCCceeEEEEecCCCC
Q 025885 99 GHDWGALIAWYFCLF-RPDRVKALVNMSVPFP 129 (247)
Q Consensus 99 GhS~Gg~~a~~~a~~-~p~~v~~lv~~~~~~~ 129 (247)
|||.|+.+|.....+ +..+|.+++++++.+.
T Consensus 142 GHSaGAHLa~qav~R~r~prI~gl~l~~GvY~ 173 (270)
T KOG4627|consen 142 GHSAGAHLAAQAVMRQRSPRIWGLILLCGVYD 173 (270)
T ss_pred ccchHHHHHHHHHHHhcCchHHHHHHHhhHhh
Confidence 999999998877665 4458999999987664
No 147
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=97.96 E-value=2.1e-05 Score=71.33 Aligned_cols=99 Identities=20% Similarity=0.250 Sum_probs=72.2
Q ss_pred CeEEEEcCCCCC-----hhhHHHH--HHHHHHCCCEEEEeCCCCCCCCCCC------CCCCCCCHHHHHHHHHHHHHHhC
Q 025885 25 PAVLFIHGFPEL-----WYSWRNQ--LLYLSSRGYRAIAPDLRGYGDTDAP------PSVTSYTALHLVGDLIGLLDKLG 91 (247)
Q Consensus 25 ~~vvllHG~~~~-----~~~~~~~--~~~l~~~g~~v~~~d~~G~G~s~~~------~~~~~~~~~~~~~~~~~~~~~l~ 91 (247)
|+++++=|.|+- ...|... +..|+..||.|+.+|-||-...... ..-.....++.++.+.-+.+..|
T Consensus 643 ptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQVeglq~Laeq~g 722 (867)
T KOG2281|consen 643 PTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQVEGLQMLAEQTG 722 (867)
T ss_pred ceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCccccchhhHHHHhhccCeeeehhhHHHHHHHHHhcC
Confidence 899999999974 3334333 3467889999999999986433211 00012345667777777777775
Q ss_pred ---CceEEEEEechhHHHHHHHHHhCCCceeEEEE
Q 025885 92 ---IHQVFLVGHDWGALIAWYFCLFRPDRVKALVN 123 (247)
Q Consensus 92 ---~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~ 123 (247)
.++|.+-|+|+||.+++....++|+.++..|.
T Consensus 723 fidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIA 757 (867)
T KOG2281|consen 723 FIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIA 757 (867)
T ss_pred cccchheeEeccccccHHHHHHhhcCcceeeEEec
Confidence 46899999999999999999999987666654
No 148
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=97.94 E-value=5.1e-05 Score=61.38 Aligned_cols=106 Identities=20% Similarity=0.149 Sum_probs=54.0
Q ss_pred CCCeEEEEcCCCCChhhHHHHHHHHH----HCCCEEEEeCCCC-----CCCCC------------CC------CC---CC
Q 025885 23 TGPAVLFIHGFPELWYSWRNQLLYLS----SRGYRAIAPDLRG-----YGDTD------------AP------PS---VT 72 (247)
Q Consensus 23 ~~~~vvllHG~~~~~~~~~~~~~~l~----~~g~~v~~~d~~G-----~G~s~------------~~------~~---~~ 72 (247)
.++-||+|||+.+|+..++.+...|. +.++..+.+|-|- -|-.. .+ .. ..
T Consensus 3 ~k~riLcLHG~~~na~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~ 82 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDHE 82 (212)
T ss_dssp ---EEEEE--TT--HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SGG
T ss_pred CCceEEEeCCCCcCHHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCccc
Confidence 46789999999999998877765444 3268888887541 11110 00 00 01
Q ss_pred CCCHHHHHHHHHHHHHHhCCceEEEEEechhHHHHHHHHHhC--------CCceeEEEEecCCCC
Q 025885 73 SYTALHLVGDLIGLLDKLGIHQVFLVGHDWGALIAWYFCLFR--------PDRVKALVNMSVPFP 129 (247)
Q Consensus 73 ~~~~~~~~~~~~~~~~~l~~~~~~lvGhS~Gg~~a~~~a~~~--------p~~v~~lv~~~~~~~ 129 (247)
....++..+.+.+.++..|. =..|+|+|.||.+|..++... ...++.+|++++..+
T Consensus 83 ~~~~~~sl~~l~~~i~~~GP-fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p 146 (212)
T PF03959_consen 83 YEGLDESLDYLRDYIEENGP-FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPP 146 (212)
T ss_dssp G---HHHHHHHHHHHHHH----SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----
T ss_pred ccCHHHHHHHHHHHHHhcCC-eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCC
Confidence 12345555666666766653 357999999999998887542 124788888886654
No 149
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=97.91 E-value=0.0002 Score=68.39 Aligned_cols=123 Identities=19% Similarity=0.260 Sum_probs=82.9
Q ss_pred CceEEEEeCCEEEEEEeeC-------CC-CeEEEEcCCCCCh-------hhHHHHHHHHHHCCCEEEEeCCCCCCCCCCC
Q 025885 4 IEHTTVATNGINMHVASIG-------TG-PAVLFIHGFPELW-------YSWRNQLLYLSSRGYRAIAPDLRGYGDTDAP 68 (247)
Q Consensus 4 ~~~~~~~~~g~~~~~~~~g-------~~-~~vvllHG~~~~~-------~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~ 68 (247)
++...+..+|...++...- ++ |.+|.+||.|++. -.|..+ .....|+.|+.+|.||-|.....
T Consensus 498 ~~~~~i~~~~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~--~~s~~g~~v~~vd~RGs~~~G~~ 575 (755)
T KOG2100|consen 498 VEFGKIEIDGITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEV--VVSSRGFAVLQVDGRGSGGYGWD 575 (755)
T ss_pred ceeEEEEeccEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeEEecHHHH--hhccCCeEEEEEcCCCcCCcchh
Confidence 4556677799999887532 12 7788999999732 234433 34567999999999997654321
Q ss_pred ------CCCCCCCHHHHHHHHHHHHHHh--CCceEEEEEechhHHHHHHHHHhCCCceeEE-EEecCCC
Q 025885 69 ------PSVTSYTALHLVGDLIGLLDKL--GIHQVFLVGHDWGALIAWYFCLFRPDRVKAL-VNMSVPF 128 (247)
Q Consensus 69 ------~~~~~~~~~~~~~~~~~~~~~l--~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~l-v~~~~~~ 128 (247)
........++....+..+++.. ..+++.+.|+|.||.++..++...|+++.++ +.+++..
T Consensus 576 ~~~~~~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVt 644 (755)
T KOG2100|consen 576 FRSALPRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVT 644 (755)
T ss_pred HHHHhhhhcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEeccee
Confidence 1112234455555555555544 3458999999999999999999998665444 7777643
No 150
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=97.89 E-value=0.00023 Score=61.38 Aligned_cols=114 Identities=15% Similarity=0.081 Sum_probs=74.8
Q ss_pred CCEEEEEEeeC------CCCeEEEEcCCCC-----ChhhHHHHHHHHH-HCCCEEEEeCCCCCCCCCCCCCCCCCCHHHH
Q 025885 12 NGINMHVASIG------TGPAVLFIHGFPE-----LWYSWRNQLLYLS-SRGYRAIAPDLRGYGDTDAPPSVTSYTALHL 79 (247)
Q Consensus 12 ~g~~~~~~~~g------~~~~vvllHG~~~-----~~~~~~~~~~~l~-~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~ 79 (247)
+++.+..+... ..|.||++||++- ++..+..+...++ +.+..|+++|+|=--+... +...++-
T Consensus 72 ~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPEh~~-----Pa~y~D~ 146 (336)
T KOG1515|consen 72 TNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPEHPF-----PAAYDDG 146 (336)
T ss_pred CCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCCCCC-----CccchHH
Confidence 45555554332 2478999999752 2455666766664 4588899999984333322 3344444
Q ss_pred HHHHHHHHHH------hCCceEEEEEechhHHHHHHHHHhC------CCceeEEEEecCCCCC
Q 025885 80 VGDLIGLLDK------LGIHQVFLVGHDWGALIAWYFCLFR------PDRVKALVNMSVPFPP 130 (247)
Q Consensus 80 ~~~~~~~~~~------l~~~~~~lvGhS~Gg~~a~~~a~~~------p~~v~~lv~~~~~~~~ 130 (247)
.+.+.-+.++ .+.++++|+|-|.||.+|..+|.+. +-++++.|++-+-+..
T Consensus 147 ~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~ 209 (336)
T KOG1515|consen 147 WAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQG 209 (336)
T ss_pred HHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCC
Confidence 4445544443 2556899999999999998887652 3478999999766544
No 151
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=97.89 E-value=0.00015 Score=59.44 Aligned_cols=96 Identities=22% Similarity=0.272 Sum_probs=67.1
Q ss_pred CeEEEEcCCCCChhh--HHHHHHHHHHC-CCEEEEeCCCCCC--CCCCCCCCCCCCHHHHHHHHHHHHHHhCC-----ce
Q 025885 25 PAVLFIHGFPELWYS--WRNQLLYLSSR-GYRAIAPDLRGYG--DTDAPPSVTSYTALHLVGDLIGLLDKLGI-----HQ 94 (247)
Q Consensus 25 ~~vvllHG~~~~~~~--~~~~~~~l~~~-g~~v~~~d~~G~G--~s~~~~~~~~~~~~~~~~~~~~~~~~l~~-----~~ 94 (247)
.|+|++||.+++..+ ...+.+.+.+. |..|++.|. |-| .|. ...+-+.+..+.+.++. +-
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~lei-g~g~~~s~---------l~pl~~Qv~~~ce~v~~m~~lsqG 93 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEI-GDGIKDSS---------LMPLWEQVDVACEKVKQMPELSQG 93 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEe-cCCcchhh---------hccHHHHHHHHHHHHhcchhccCc
Confidence 689999999998776 77777777653 788888887 444 221 11122223333333321 34
Q ss_pred EEEEEechhHHHHHHHHHhCCC-ceeEEEEecCCCCC
Q 025885 95 VFLVGHDWGALIAWYFCLFRPD-RVKALVNMSVPFPP 130 (247)
Q Consensus 95 ~~lvGhS~Gg~~a~~~a~~~p~-~v~~lv~~~~~~~~ 130 (247)
+.++|.|.||.++..++..-++ .|+.+|.+++|+..
T Consensus 94 ynivg~SQGglv~Raliq~cd~ppV~n~ISL~gPhaG 130 (296)
T KOG2541|consen 94 YNIVGYSQGGLVARALIQFCDNPPVKNFISLGGPHAG 130 (296)
T ss_pred eEEEEEccccHHHHHHHHhCCCCCcceeEeccCCcCC
Confidence 8999999999999999987554 59999999998754
No 152
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=97.87 E-value=0.00014 Score=65.26 Aligned_cols=106 Identities=18% Similarity=0.245 Sum_probs=66.9
Q ss_pred CeEEEEcCCCCChhh-H--HHHHHHHHHC-CCEEEEeCCCCCCCCCCCC-----CCCCCCHHHHHHHHHHHHHHhC----
Q 025885 25 PAVLFIHGFPELWYS-W--RNQLLYLSSR-GYRAIAPDLRGYGDTDAPP-----SVTSYTALHLVGDLIGLLDKLG---- 91 (247)
Q Consensus 25 ~~vvllHG~~~~~~~-~--~~~~~~l~~~-g~~v~~~d~~G~G~s~~~~-----~~~~~~~~~~~~~~~~~~~~l~---- 91 (247)
-||+|.-|.-+.... | ..++..|+++ |-.+++.+.|-||.|.... .....+.++..+|+..+++++.
T Consensus 29 gpifl~~ggE~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~~ 108 (434)
T PF05577_consen 29 GPIFLYIGGEGPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKYN 108 (434)
T ss_dssp SEEEEEE--SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHTT
T ss_pred CCEEEEECCCCccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhhc
Confidence 345444455444432 2 2244455543 6789999999999996432 1223477888899988888763
Q ss_pred ---CceEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCC
Q 025885 92 ---IHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFPP 130 (247)
Q Consensus 92 ---~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~~~ 130 (247)
-.+++++|-|+||++|..+-.++|+.|.+.+.-++|...
T Consensus 109 ~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv~a 150 (434)
T PF05577_consen 109 TAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPVQA 150 (434)
T ss_dssp TGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--CCH
T ss_pred CCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccceeee
Confidence 137999999999999999999999999999988877643
No 153
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=97.85 E-value=0.002 Score=55.26 Aligned_cols=124 Identities=18% Similarity=0.122 Sum_probs=76.4
Q ss_pred eEEEEeCCEEEEEEe--eCC---CCeEEEEcCCCCChh---hHHHHHHHHHHCCCEEEEeCCCCC--CCC----------
Q 025885 6 HTTVATNGINMHVAS--IGT---GPAVLFIHGFPELWY---SWRNQLLYLSSRGYRAIAPDLRGY--GDT---------- 65 (247)
Q Consensus 6 ~~~~~~~g~~~~~~~--~g~---~~~vvllHG~~~~~~---~~~~~~~~l~~~g~~v~~~d~~G~--G~s---------- 65 (247)
...+..++.++-... ... .-.||++||.+.+.. ....+-..|.+.|++.+++.+|.- ...
T Consensus 64 ~~~L~~~~~~flaL~~~~~~~~~~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~ 143 (310)
T PF12048_consen 64 VQWLQAGEERFLALWRPANSAKPQGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEEV 143 (310)
T ss_pred cEEeecCCEEEEEEEecccCCCCceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCC
Confidence 344555666654332 212 248999999987753 345566678889999999887761 100
Q ss_pred ----CCCCCCCC---------------CCHHHHHHHHHHHHHHh---CCceEEEEEechhHHHHHHHHHhCCC-ceeEEE
Q 025885 66 ----DAPPSVTS---------------YTALHLVGDLIGLLDKL---GIHQVFLVGHDWGALIAWYFCLFRPD-RVKALV 122 (247)
Q Consensus 66 ----~~~~~~~~---------------~~~~~~~~~~~~~~~~l---~~~~~~lvGhS~Gg~~a~~~a~~~p~-~v~~lv 122 (247)
+....... .....+..-|.+.+..+ +.++++|+||+.|+..+..+.+..+. .++++|
T Consensus 144 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~~~~~ivlIg~G~gA~~~~~~la~~~~~~~daLV 223 (310)
T PF12048_consen 144 PSAGDQQLSQPSDEPSPASAQEAEAREAYEERLFARIEAAIAFAQQQGGKNIVLIGHGTGAGWAARYLAEKPPPMPDALV 223 (310)
T ss_pred CCCCCCCcCCCCCCCccccccHhHHhHHHHHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHhcCCCcccCeEE
Confidence 00000000 00123333344444433 55679999999999999999887664 589999
Q ss_pred EecCCCC
Q 025885 123 NMSVPFP 129 (247)
Q Consensus 123 ~~~~~~~ 129 (247)
++++-.+
T Consensus 224 ~I~a~~p 230 (310)
T PF12048_consen 224 LINAYWP 230 (310)
T ss_pred EEeCCCC
Confidence 9987554
No 154
>PLN02633 palmitoyl protein thioesterase family protein
Probab=97.85 E-value=0.00024 Score=59.97 Aligned_cols=102 Identities=16% Similarity=0.171 Sum_probs=65.3
Q ss_pred CCCeEEEEcCCCCChh--hHHHHHHHHHH-CCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH---hCCceEE
Q 025885 23 TGPAVLFIHGFPELWY--SWRNQLLYLSS-RGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDK---LGIHQVF 96 (247)
Q Consensus 23 ~~~~vvllHG~~~~~~--~~~~~~~~l~~-~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~---l~~~~~~ 96 (247)
...|+|+.||.+++.. ....+.+.+.+ .|..+.++.. |.+.. .. .-....+.++.+.+.+.. +. +-+.
T Consensus 24 ~~~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i---g~~~~-~s-~~~~~~~Qve~vce~l~~~~~l~-~G~n 97 (314)
T PLN02633 24 VSVPFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI---GNGVG-DS-WLMPLTQQAEIACEKVKQMKELS-QGYN 97 (314)
T ss_pred CCCCeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEE---CCCcc-cc-ceeCHHHHHHHHHHHHhhchhhh-CcEE
Confidence 4578999999998755 34445555533 2566666544 22211 10 112333334444333333 22 3499
Q ss_pred EEEechhHHHHHHHHHhCCC--ceeEEEEecCCCCC
Q 025885 97 LVGHDWGALIAWYFCLFRPD--RVKALVNMSVPFPP 130 (247)
Q Consensus 97 lvGhS~Gg~~a~~~a~~~p~--~v~~lv~~~~~~~~ 130 (247)
++|+|.||.++..++.+.|+ .|+.+|.+++|+..
T Consensus 98 aIGfSQGGlflRa~ierc~~~p~V~nlISlggph~G 133 (314)
T PLN02633 98 IVGRSQGNLVARGLIEFCDGGPPVYNYISLAGPHAG 133 (314)
T ss_pred EEEEccchHHHHHHHHHCCCCCCcceEEEecCCCCC
Confidence 99999999999999999887 59999999988653
No 155
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=97.81 E-value=7.3e-05 Score=68.06 Aligned_cols=104 Identities=14% Similarity=0.063 Sum_probs=62.6
Q ss_pred CCeEEEEcCCCC---ChhhHHHHHHHHHHC-C-CEEEEeCCC----CCCCCCCCCCCCCCCHHH---HHHHHHHHHHHhC
Q 025885 24 GPAVLFIHGFPE---LWYSWRNQLLYLSSR-G-YRAIAPDLR----GYGDTDAPPSVTSYTALH---LVGDLIGLLDKLG 91 (247)
Q Consensus 24 ~~~vvllHG~~~---~~~~~~~~~~~l~~~-g-~~v~~~d~~----G~G~s~~~~~~~~~~~~~---~~~~~~~~~~~l~ 91 (247)
.|.||++||.+- +...+ ....++.. + +.|+.+++| |+..+............+ ..+.+.+-++..|
T Consensus 95 ~pv~v~ihGG~~~~g~~~~~--~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~~~~~n~g~~D~~~al~wv~~~i~~fg 172 (493)
T cd00312 95 LPVMVWIHGGGFMFGSGSLY--PGDGLAREGDNVIVVSINYRLGVLGFLSTGDIELPGNYGLKDQRLALKWVQDNIAAFG 172 (493)
T ss_pred CCEEEEEcCCccccCCCCCC--ChHHHHhcCCCEEEEEecccccccccccCCCCCCCcchhHHHHHHHHHHHHHHHHHhC
Confidence 488999999642 22222 22334433 3 889999988 343332211111222222 2334445555555
Q ss_pred --CceEEEEEechhHHHHHHHHHh--CCCceeEEEEecCCCC
Q 025885 92 --IHQVFLVGHDWGALIAWYFCLF--RPDRVKALVNMSVPFP 129 (247)
Q Consensus 92 --~~~~~lvGhS~Gg~~a~~~a~~--~p~~v~~lv~~~~~~~ 129 (247)
.++|+|.|+|.||..+..++.. .+..++++|++++...
T Consensus 173 gd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~ 214 (493)
T cd00312 173 GDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSAL 214 (493)
T ss_pred CCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCcc
Confidence 4589999999999998888765 2446889998887654
No 156
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.79 E-value=0.00015 Score=62.01 Aligned_cols=103 Identities=16% Similarity=0.207 Sum_probs=63.8
Q ss_pred CCeEEEEcCCCCChhh-HHHHHHHHHHCCC--EEEEeCCCCCCCCCCC---CCCCCCCHHHHHHHHHHHHHHhCCceEEE
Q 025885 24 GPAVLFIHGFPELWYS-WRNQLLYLSSRGY--RAIAPDLRGYGDTDAP---PSVTSYTALHLVGDLIGLLDKLGIHQVFL 97 (247)
Q Consensus 24 ~~~vvllHG~~~~~~~-~~~~~~~l~~~g~--~v~~~d~~G~G~s~~~---~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 97 (247)
+..+||+||+.-+... -...++.....|+ ..+.+.||..|.--.- .....|+-.++..-+..+.+..+.++|+|
T Consensus 116 k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~~~~I~i 195 (377)
T COG4782 116 KTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKPVKRIYL 195 (377)
T ss_pred CeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCCCceEEE
Confidence 5689999999876543 3344444444444 5678899877642110 11123444554444555555556789999
Q ss_pred EEechhHHHHHHHHHh--------CCCceeEEEEecC
Q 025885 98 VGHDWGALIAWYFCLF--------RPDRVKALVNMSV 126 (247)
Q Consensus 98 vGhS~Gg~~a~~~a~~--------~p~~v~~lv~~~~ 126 (247)
++||||..+++..... .+.+++-+|+.++
T Consensus 196 lAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaP 232 (377)
T COG4782 196 LAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAP 232 (377)
T ss_pred EEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCC
Confidence 9999999998877543 2335677776554
No 157
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=97.73 E-value=0.00015 Score=57.41 Aligned_cols=100 Identities=21% Similarity=0.328 Sum_probs=70.3
Q ss_pred CeEEEEcCCCCChhhHHHHHHHHHHCCCEEEEeCCCCC--------CC---------C-CCCCCCCCCCHHHHHHHHHHH
Q 025885 25 PAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGY--------GD---------T-DAPPSVTSYTALHLVGDLIGL 86 (247)
Q Consensus 25 ~~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~--------G~---------s-~~~~~~~~~~~~~~~~~~~~~ 86 (247)
.+||++||.+++...|..++..+.-....-++|..|-. +. + +.+. ...+....++.+..+
T Consensus 4 atIi~LHglGDsg~~~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~--d~~~~~~aa~~i~~L 81 (206)
T KOG2112|consen 4 ATIIFLHGLGDSGSGWAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPE--DEEGLHRAADNIANL 81 (206)
T ss_pred EEEEEEecCCCCCccHHHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccch--hhhHHHHHHHHHHHH
Confidence 47999999999999998888887666666777754321 10 0 0111 122344555566666
Q ss_pred HHHh---C--CceEEEEEechhHHHHHHHHHhCCCceeEEEEecC
Q 025885 87 LDKL---G--IHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSV 126 (247)
Q Consensus 87 ~~~l---~--~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~ 126 (247)
++.. | .+++.+-|.|+||++++..+..+|..+.+++..++
T Consensus 82 i~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~ 126 (206)
T KOG2112|consen 82 IDNEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSG 126 (206)
T ss_pred HHHHHHcCCCccceeEcccCchHHHHHHHHhccccccceeecccc
Confidence 6654 4 35799999999999999999999888888776654
No 158
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=97.73 E-value=0.00025 Score=60.73 Aligned_cols=103 Identities=17% Similarity=0.153 Sum_probs=72.2
Q ss_pred CCeEEEEcCCCCChhhHHH-H-HHHHHHCCCEEEEeCCCCCCCCCCCCCCCCC---CHHH-------HHH---HHHHHHH
Q 025885 24 GPAVLFIHGFPELWYSWRN-Q-LLYLSSRGYRAIAPDLRGYGDTDAPPSVTSY---TALH-------LVG---DLIGLLD 88 (247)
Q Consensus 24 ~~~vvllHG~~~~~~~~~~-~-~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~---~~~~-------~~~---~~~~~~~ 88 (247)
+|.+|.+.|-+++.+..+. + +..|.+.|+..+.+..|-||..... .+... +..+ .+. .+..+++
T Consensus 92 rp~~IhLagTGDh~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~-~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll~Wl~ 170 (348)
T PF09752_consen 92 RPVCIHLAGTGDHGFWRRRRLMARPLLKEGIASLILENPYYGQRKPK-DQRRSSLRNVSDLFVMGRATILESRALLHWLE 170 (348)
T ss_pred CceEEEecCCCccchhhhhhhhhhHHHHcCcceEEEecccccccChh-HhhcccccchhHHHHHHhHHHHHHHHHHHHHH
Confidence 6788889998886554443 3 5677777999999999999875432 21111 1111 122 2334444
Q ss_pred HhCCceEEEEEechhHHHHHHHHHhCCCceeEEEEecCC
Q 025885 89 KLGIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVP 127 (247)
Q Consensus 89 ~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~ 127 (247)
..|..++.+.|.||||.+|...|+..|..+..+-+++..
T Consensus 171 ~~G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~ 209 (348)
T PF09752_consen 171 REGYGPLGLTGISMGGHMAALAASNWPRPVALVPCLSWS 209 (348)
T ss_pred hcCCCceEEEEechhHhhHHhhhhcCCCceeEEEeeccc
Confidence 448889999999999999999999999888777676643
No 159
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=97.70 E-value=9.5e-05 Score=53.40 Aligned_cols=43 Identities=16% Similarity=0.511 Sum_probs=29.5
Q ss_pred CCCceEEEEeCCEEEEEEeeC----CCCeEEEEcCCCCChhhHHHHH
Q 025885 2 EKIEHTTVATNGINMHVASIG----TGPAVLFIHGFPELWYSWRNQL 44 (247)
Q Consensus 2 ~~~~~~~~~~~g~~~~~~~~g----~~~~vvllHG~~~~~~~~~~~~ 44 (247)
....+...+++|..+|+.... +..||||+||||+|...|.+++
T Consensus 66 N~~phf~t~I~g~~iHFih~rs~~~~aiPLll~HGWPgSf~Ef~~vI 112 (112)
T PF06441_consen 66 NSFPHFKTEIDGLDIHFIHVRSKRPNAIPLLLLHGWPGSFLEFLKVI 112 (112)
T ss_dssp TTS-EEEEEETTEEEEEEEE--S-TT-EEEEEE--SS--GGGGHHHH
T ss_pred HcCCCeeEEEeeEEEEEEEeeCCCCCCeEEEEECCCCccHHhHHhhC
Confidence 346678889999999998654 3469999999999999887764
No 160
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=97.67 E-value=5.5e-05 Score=63.35 Aligned_cols=39 Identities=26% Similarity=0.356 Sum_probs=35.9
Q ss_pred CeEEEEcCCCCChhhHHHHHHHHHHCCCEEEEeCCCCCC
Q 025885 25 PAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYG 63 (247)
Q Consensus 25 ~~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G 63 (247)
|.+||-||.+++..-|...--.|+..||-|.+++.|-..
T Consensus 119 PvvvFSHGLggsRt~YSa~c~~LAShG~VVaavEHRD~S 157 (399)
T KOG3847|consen 119 PVVVFSHGLGGSRTLYSAYCTSLASHGFVVAAVEHRDRS 157 (399)
T ss_pred cEEEEecccccchhhHHHHhhhHhhCceEEEEeecccCc
Confidence 889999999999999999999999999999999998654
No 161
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=97.67 E-value=6.2e-05 Score=62.74 Aligned_cols=105 Identities=15% Similarity=0.118 Sum_probs=53.8
Q ss_pred CCeEEEEcCCCCCh---hhHHHHHHHHHHC--CCEEEEeCCCCCCCC-CCCCCCCCCCHHHHHHHHHHHHHHhC-C-ceE
Q 025885 24 GPAVLFIHGFPELW---YSWRNQLLYLSSR--GYRAIAPDLRGYGDT-DAPPSVTSYTALHLVGDLIGLLDKLG-I-HQV 95 (247)
Q Consensus 24 ~~~vvllHG~~~~~---~~~~~~~~~l~~~--g~~v~~~d~~G~G~s-~~~~~~~~~~~~~~~~~~~~~~~~l~-~-~~~ 95 (247)
-.|||+.||++++. ..+..+...+.+. |--|.++++- -+.+ +.... .-.+..+.++.+.+.+..-. . +-+
T Consensus 5 ~~PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~ig-~~~~~D~~~s-~f~~v~~Qv~~vc~~l~~~p~L~~G~ 82 (279)
T PF02089_consen 5 PLPVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEIG-NDPSEDVENS-FFGNVNDQVEQVCEQLANDPELANGF 82 (279)
T ss_dssp S--EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--SS-SSHHHHHHHH-HHSHHHHHHHHHHHHHHH-GGGTT-E
T ss_pred CCcEEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEEC-CCcchhhhhh-HHHHHHHHHHHHHHHHhhChhhhcce
Confidence 35899999999864 3565555444432 6667777762 2211 00000 00122333444444444321 1 359
Q ss_pred EEEEechhHHHHHHHHHhCCC-ceeEEEEecCCCCC
Q 025885 96 FLVGHDWGALIAWYFCLFRPD-RVKALVNMSVPFPP 130 (247)
Q Consensus 96 ~lvGhS~Gg~~a~~~a~~~p~-~v~~lv~~~~~~~~ 130 (247)
+++|+|.||.++..++.+.|+ .|+.+|.+++|+..
T Consensus 83 ~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggph~G 118 (279)
T PF02089_consen 83 NAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGPHMG 118 (279)
T ss_dssp EEEEETCHHHHHHHHHHH-TSS-EEEEEEES--TT-
T ss_pred eeeeeccccHHHHHHHHHCCCCCceeEEEecCcccc
Confidence 999999999999999999865 69999999998753
No 162
>COG0627 Predicted esterase [General function prediction only]
Probab=97.61 E-value=0.00028 Score=60.32 Aligned_cols=107 Identities=20% Similarity=0.230 Sum_probs=67.6
Q ss_pred CeEEEEcCCCCChhhH---HHHHHHHHHCCCEEEEeCCC--------------CCCCCCCCCCC-----C-CCCHHHH-H
Q 025885 25 PAVLFIHGFPELWYSW---RNQLLYLSSRGYRAIAPDLR--------------GYGDTDAPPSV-----T-SYTALHL-V 80 (247)
Q Consensus 25 ~~vvllHG~~~~~~~~---~~~~~~l~~~g~~v~~~d~~--------------G~G~s~~~~~~-----~-~~~~~~~-~ 80 (247)
|+++++||...+...| ..+-......|..++++|-. |-+.|--.... . .+...+. .
T Consensus 55 pV~~~l~G~t~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~~~q~~tfl~ 134 (316)
T COG0627 55 PVLYLLSGLTCNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASGPYQWETFLT 134 (316)
T ss_pred CEEEEeCCCCCCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccCccchhHHHH
Confidence 6778899988775433 22333444567888887432 33322111110 1 1444433 3
Q ss_pred HHHHHHHHHhCC-----ceEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCCC
Q 025885 81 GDLIGLLDKLGI-----HQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFPPR 131 (247)
Q Consensus 81 ~~~~~~~~~l~~-----~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~~~~ 131 (247)
+++.+.+++... ++..++||||||.=|+.+|+++|+++..+..+++...+.
T Consensus 135 ~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s 190 (316)
T COG0627 135 QELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSPS 190 (316)
T ss_pred hhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceecccccccccc
Confidence 456645544322 268899999999999999999999999999888765543
No 163
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=97.60 E-value=0.00014 Score=58.22 Aligned_cols=115 Identities=18% Similarity=0.274 Sum_probs=71.6
Q ss_pred EEeCCEEEEEEeeCC-CCeEEEEcCCCCChhh-HHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCC--------CCCCHHH
Q 025885 9 VATNGINMHVASIGT-GPAVLFIHGFPELWYS-WRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSV--------TSYTALH 78 (247)
Q Consensus 9 ~~~~g~~~~~~~~g~-~~~vvllHG~~~~~~~-~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~--------~~~~~~~ 78 (247)
.++.|.+-.+....+ ...||++.-+-+.... -+..+..++.+||.|++||+..= ....+..+ ...+...
T Consensus 23 ~~v~gldaYv~gs~~~~~~li~i~DvfG~~~~n~r~~Adk~A~~Gy~v~vPD~~~G-dp~~~~~~~~~~~~w~~~~~~~~ 101 (242)
T KOG3043|consen 23 EEVGGLDAYVVGSTSSKKVLIVIQDVFGFQFPNTREGADKVALNGYTVLVPDFFRG-DPWSPSLQKSERPEWMKGHSPPK 101 (242)
T ss_pred EeecCeeEEEecCCCCCeEEEEEEeeeccccHHHHHHHHHHhcCCcEEEcchhhcC-CCCCCCCChhhhHHHHhcCCccc
Confidence 344555544433323 3467777766555444 67888899999999999997432 11111100 0112233
Q ss_pred HHHHHHHHHHHh---C-CceEEEEEechhHHHHHHHHHhCCCceeEEEEec
Q 025885 79 LVGDLIGLLDKL---G-IHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMS 125 (247)
Q Consensus 79 ~~~~~~~~~~~l---~-~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~ 125 (247)
.-.++..+++.+ + .++|.++|.+|||.++..+.+..| .+.+.+..-
T Consensus 102 ~~~~i~~v~k~lk~~g~~kkIGv~GfCwGak~vv~~~~~~~-~f~a~v~~h 151 (242)
T KOG3043|consen 102 IWKDITAVVKWLKNHGDSKKIGVVGFCWGAKVVVTLSAKDP-EFDAGVSFH 151 (242)
T ss_pred chhHHHHHHHHHHHcCCcceeeEEEEeecceEEEEeeccch-hheeeeEec
Confidence 344555555544 4 568999999999999999999888 577777654
No 164
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=97.57 E-value=0.00024 Score=60.32 Aligned_cols=83 Identities=24% Similarity=0.321 Sum_probs=49.6
Q ss_pred HHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH---HhCC---ceEEEEEechhHHHHHHHHHh---
Q 025885 43 QLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLD---KLGI---HQVFLVGHDWGALIAWYFCLF--- 113 (247)
Q Consensus 43 ~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~---~l~~---~~~~lvGhS~Gg~~a~~~a~~--- 113 (247)
++..+.++||.|+++|+.|.|..-.. .........+-+.+..+ ..++ .++.++|||.||..++..|..
T Consensus 18 ~l~~~L~~GyaVv~pDY~Glg~~y~~---~~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA~l~~~ 94 (290)
T PF03583_consen 18 FLAAWLARGYAVVAPDYEGLGTPYLN---GRSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWAAELAPS 94 (290)
T ss_pred HHHHHHHCCCEEEecCCCCCCCcccC---cHhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHHHHHhHH
Confidence 34555678999999999999872111 11112222223333222 2232 379999999999998776644
Q ss_pred -CCCc---eeEEEEecCCC
Q 025885 114 -RPDR---VKALVNMSVPF 128 (247)
Q Consensus 114 -~p~~---v~~lv~~~~~~ 128 (247)
.||. +.+.+..++|.
T Consensus 95 YApeL~~~l~Gaa~gg~~~ 113 (290)
T PF03583_consen 95 YAPELNRDLVGAAAGGPPA 113 (290)
T ss_pred hCcccccceeEEeccCCcc
Confidence 3442 56666655443
No 165
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=97.50 E-value=0.00033 Score=63.87 Aligned_cols=91 Identities=19% Similarity=0.258 Sum_probs=57.4
Q ss_pred hhHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----CCceEEEEEechhHHHHHHHHHh
Q 025885 38 YSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKL----GIHQVFLVGHDWGALIAWYFCLF 113 (247)
Q Consensus 38 ~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~l----~~~~~~lvGhS~Gg~~a~~~a~~ 113 (247)
..|..+++.|++.||. --|+.|...--+-........++....+..+++.. +-++++||||||||.+++.+...
T Consensus 156 ~vw~kLIe~L~~iGY~--~~nL~gAPYDWRls~~~le~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL~w 233 (642)
T PLN02517 156 FVWAVLIANLARIGYE--EKNMYMAAYDWRLSFQNTEVRDQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFMKW 233 (642)
T ss_pred eeHHHHHHHHHHcCCC--CCceeecccccccCccchhhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHHHh
Confidence 4679999999999997 34444432211111000111233444455555533 45799999999999999998764
Q ss_pred CC---------------CceeEEEEecCCCCC
Q 025885 114 RP---------------DRVKALVNMSVPFPP 130 (247)
Q Consensus 114 ~p---------------~~v~~lv~~~~~~~~ 130 (247)
.. ..|+++|.+++|+..
T Consensus 234 v~~~~~~gG~gG~~W~dKyI~s~I~Iagp~lG 265 (642)
T PLN02517 234 VEAPAPMGGGGGPGWCAKHIKAVMNIGGPFLG 265 (642)
T ss_pred ccccccccCCcchHHHHHHHHHheecccccCC
Confidence 21 248999999988754
No 166
>COG3150 Predicted esterase [General function prediction only]
Probab=97.46 E-value=0.0006 Score=52.18 Aligned_cols=87 Identities=20% Similarity=0.333 Sum_probs=60.7
Q ss_pred EEEEcCCCCChhhHHHHH--HHHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEechhH
Q 025885 27 VLFIHGFPELWYSWRNQL--LYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVFLVGHDWGA 104 (247)
Q Consensus 27 vvllHG~~~~~~~~~~~~--~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~lvGhS~Gg 104 (247)
||.+|||-+|..+...++ ..+.+. .+-+.+ +... -.......++.+..++..++-+...+||.|.||
T Consensus 2 ilYlHGFnSSP~shka~l~~q~~~~~-~~~i~y-------~~p~---l~h~p~~a~~ele~~i~~~~~~~p~ivGssLGG 70 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVLLLQFIDED-VRDIEY-------STPH---LPHDPQQALKELEKAVQELGDESPLIVGSSLGG 70 (191)
T ss_pred eEEEecCCCCcccHHHHHHHHHHhcc-ccceee-------ecCC---CCCCHHHHHHHHHHHHHHcCCCCceEEeecchH
Confidence 799999988877765443 333332 222222 2111 133567788899999999987789999999999
Q ss_pred HHHHHHHHhCCCceeEEEEecCC
Q 025885 105 LIAWYFCLFRPDRVKALVNMSVP 127 (247)
Q Consensus 105 ~~a~~~a~~~p~~v~~lv~~~~~ 127 (247)
..|..++.++. +++++ +++.
T Consensus 71 Y~At~l~~~~G--irav~-~NPa 90 (191)
T COG3150 71 YYATWLGFLCG--IRAVV-FNPA 90 (191)
T ss_pred HHHHHHHHHhC--Chhhh-cCCC
Confidence 99999999886 66665 3443
No 167
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.42 E-value=0.00045 Score=52.70 Aligned_cols=51 Identities=20% Similarity=0.195 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHh----CCceEEEEEechhHHHHHHHHHhCCC----ceeEEEEecCCCC
Q 025885 79 LVGDLIGLLDKL----GIHQVFLVGHDWGALIAWYFCLFRPD----RVKALVNMSVPFP 129 (247)
Q Consensus 79 ~~~~~~~~~~~l----~~~~~~lvGhS~Gg~~a~~~a~~~p~----~v~~lv~~~~~~~ 129 (247)
+...+...++.. ...+++++|||+||.+|..++....+ .+..++.+++|..
T Consensus 10 ~~~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~~ 68 (153)
T cd00741 10 LANLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPRV 68 (153)
T ss_pred HHHHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCcc
Confidence 344444444443 56789999999999999999887654 5677777776643
No 168
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=97.35 E-value=0.005 Score=54.58 Aligned_cols=121 Identities=12% Similarity=0.122 Sum_probs=77.4
Q ss_pred EEEEeC---CEEEEEEeeC------CCCeEEEEcCCCCChhhHHHHHH-------------------HHHHCCCEEEEeC
Q 025885 7 TTVATN---GINMHVASIG------TGPAVLFIHGFPELWYSWRNQLL-------------------YLSSRGYRAIAPD 58 (247)
Q Consensus 7 ~~~~~~---g~~~~~~~~g------~~~~vvllHG~~~~~~~~~~~~~-------------------~l~~~g~~v~~~d 58 (247)
-+++++ +..++|+-.. +.|.||.+.|.||.+..|..+.+ ...+ -.+++-+|
T Consensus 14 Gyl~~~~~~~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~-~an~l~iD 92 (415)
T PF00450_consen 14 GYLPVNDNENAHLFYWFFESRNDPEDDPLILWLNGGPGCSSMWGLFGENGPFRINPDGPYTLEDNPYSWNK-FANLLFID 92 (415)
T ss_dssp EEEEECTTTTEEEEEEEEE-SSGGCSS-EEEEEE-TTTB-THHHHHCTTSSEEEETTSTSEEEE-TT-GGG-TSEEEEE-
T ss_pred EEEecCCCCCcEEEEEEEEeCCCCCCccEEEEecCCceeccccccccccCceEEeeccccccccccccccc-ccceEEEe
Confidence 456665 7788887432 36899999999999988854432 0111 26789999
Q ss_pred CC-CCCCCCCCCCC-CCCCHHHHHHHHHHHHHHh-------CCceEEEEEechhHHHHHHHHHh----C------CCcee
Q 025885 59 LR-GYGDTDAPPSV-TSYTALHLVGDLIGLLDKL-------GIHQVFLVGHDWGALIAWYFCLF----R------PDRVK 119 (247)
Q Consensus 59 ~~-G~G~s~~~~~~-~~~~~~~~~~~~~~~~~~l-------~~~~~~lvGhS~Gg~~a~~~a~~----~------p~~v~ 119 (247)
.| |.|.|...... ...+.++.++++..++..+ .-.+++|.|-|+||..+-.+|.. . +-.++
T Consensus 93 ~PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLk 172 (415)
T PF00450_consen 93 QPVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLK 172 (415)
T ss_dssp -STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEE
T ss_pred ecCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccccccccccc
Confidence 55 89988654422 2346778888888777765 33489999999999877666543 3 23488
Q ss_pred EEEEecCCC
Q 025885 120 ALVNMSVPF 128 (247)
Q Consensus 120 ~lv~~~~~~ 128 (247)
++++.++-.
T Consensus 173 Gi~IGng~~ 181 (415)
T PF00450_consen 173 GIAIGNGWI 181 (415)
T ss_dssp EEEEESE-S
T ss_pred cceecCccc
Confidence 988876543
No 169
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=97.25 E-value=0.00027 Score=62.39 Aligned_cols=89 Identities=21% Similarity=0.331 Sum_probs=58.0
Q ss_pred hhHHHHHHHHHHCCCE----E--EEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEechhHHHHHHHH
Q 025885 38 YSWRNQLLYLSSRGYR----A--IAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVFLVGHDWGALIAWYFC 111 (247)
Q Consensus 38 ~~~~~~~~~l~~~g~~----v--~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~lvGhS~Gg~~a~~~a 111 (247)
..|..+++.|..-||. + ..+|+|= |-.+....+....++..-+......-|.++++||+||||+.+...+.
T Consensus 124 ~~w~~~i~~lv~~GYe~~~~l~ga~YDwRl---s~~~~e~rd~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~lyFl 200 (473)
T KOG2369|consen 124 WYWHELIENLVGIGYERGKTLFGAPYDWRL---SYHNSEERDQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVLYFL 200 (473)
T ss_pred HHHHHHHHHHHhhCcccCceeeccccchhh---ccCChhHHHHHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHHHHH
Confidence 4789999999988886 3 3457762 11111111112333333333333344668999999999999999999
Q ss_pred HhCCC--------ceeEEEEecCCCC
Q 025885 112 LFRPD--------RVKALVNMSVPFP 129 (247)
Q Consensus 112 ~~~p~--------~v~~lv~~~~~~~ 129 (247)
..+++ .+++++.+++|..
T Consensus 201 ~w~~~~~~~W~~k~I~sfvnig~p~l 226 (473)
T KOG2369|consen 201 KWVEAEGPAWCDKYIKSFVNIGAPWL 226 (473)
T ss_pred hcccccchhHHHHHHHHHHccCchhc
Confidence 98876 3677777776654
No 170
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.23 E-value=0.0043 Score=49.49 Aligned_cols=105 Identities=17% Similarity=0.207 Sum_probs=65.9
Q ss_pred CCeEEEEcCCCC-ChhhHHH---------------HHHHHHHCCCEEEEeCCC---CCCCCC-CCCCCCCCCHHHHHHHH
Q 025885 24 GPAVLFIHGFPE-LWYSWRN---------------QLLYLSSRGYRAIAPDLR---GYGDTD-APPSVTSYTALHLVGDL 83 (247)
Q Consensus 24 ~~~vvllHG~~~-~~~~~~~---------------~~~~l~~~g~~v~~~d~~---G~G~s~-~~~~~~~~~~~~~~~~~ 83 (247)
...+||+||-+- .+..|.+ .++...+.||.|++.+.- -+-.+. .|.-......++..-..
T Consensus 101 ~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~np~kyirt~veh~~yvw 180 (297)
T KOG3967|consen 101 QKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRNPQKYIRTPVEHAKYVW 180 (297)
T ss_pred cceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccCcchhccchHHHHHHHH
Confidence 468999999753 2344532 234455679999988653 122221 12111112233333334
Q ss_pred HHHHHHhCCceEEEEEechhHHHHHHHHHhCCC--ceeEEEEecCCC
Q 025885 84 IGLLDKLGIHQVFLVGHDWGALIAWYFCLFRPD--RVKALVNMSVPF 128 (247)
Q Consensus 84 ~~~~~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~--~v~~lv~~~~~~ 128 (247)
..++.-...+.+.+|.||.||.....+..+.|+ +|.++.+.+++.
T Consensus 181 ~~~v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~~ 227 (297)
T KOG3967|consen 181 KNIVLPAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSAM 227 (297)
T ss_pred HHHhcccCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeecccc
Confidence 555555677899999999999999999999884 677777776663
No 171
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=97.22 E-value=0.00081 Score=50.24 Aligned_cols=36 Identities=19% Similarity=0.276 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHhCCceEEEEEechhHHHHHHHHHh
Q 025885 78 HLVGDLIGLLDKLGIHQVFLVGHDWGALIAWYFCLF 113 (247)
Q Consensus 78 ~~~~~~~~~~~~l~~~~~~lvGhS~Gg~~a~~~a~~ 113 (247)
.+.+.+..+++..+..++++.|||+||.+|..++..
T Consensus 49 ~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~ 84 (140)
T PF01764_consen 49 QILDALKELVEKYPDYSIVITGHSLGGALASLAAAD 84 (140)
T ss_dssp HHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcccCccchhhccchHHHHHHHHHHh
Confidence 444556665555565689999999999999988765
No 172
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=97.19 E-value=0.0013 Score=60.10 Aligned_cols=105 Identities=16% Similarity=0.112 Sum_probs=57.9
Q ss_pred CeEEEEcCCCC---Ch-hhHHHHHHHHHHCCCEEEEeCCC----CCCCCCCCCCC-CCCCHHHH---HHHHHHHHHHhCC
Q 025885 25 PAVLFIHGFPE---LW-YSWRNQLLYLSSRGYRAIAPDLR----GYGDTDAPPSV-TSYTALHL---VGDLIGLLDKLGI 92 (247)
Q Consensus 25 ~~vvllHG~~~---~~-~~~~~~~~~l~~~g~~v~~~d~~----G~G~s~~~~~~-~~~~~~~~---~~~~~~~~~~l~~ 92 (247)
|++|++||.+- +. .....-...++..+.-||.+++| |+-.+...... ..+...+. .+.+.+-+..+|-
T Consensus 126 PV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~FGG 205 (535)
T PF00135_consen 126 PVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGAFGFLSLGDLDAPSGNYGLLDQRLALKWVQDNIAAFGG 205 (535)
T ss_dssp EEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HHHHH-BSSSTTSHBSTHHHHHHHHHHHHHHHHGGGGTE
T ss_pred ceEEEeecccccCCCcccccccccccccCCCEEEEEecccccccccccccccccCchhhhhhhhHHHHHHHHhhhhhccc
Confidence 88999999642 22 12223334455668999999988 44322221111 12222222 2344455555654
Q ss_pred --ceEEEEEechhHHHHHHHHHhC--CCceeEEEEecCCCC
Q 025885 93 --HQVFLVGHDWGALIAWYFCLFR--PDRVKALVNMSVPFP 129 (247)
Q Consensus 93 --~~~~lvGhS~Gg~~a~~~a~~~--p~~v~~lv~~~~~~~ 129 (247)
++|+|.|||.||..+..++... ...++++|+.++...
T Consensus 206 Dp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~~ 246 (535)
T PF00135_consen 206 DPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSAL 246 (535)
T ss_dssp EEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--TT
T ss_pred CCcceeeeeecccccccceeeeccccccccccccccccccc
Confidence 4799999999998877776552 247999999987543
No 173
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=97.13 E-value=0.0022 Score=57.16 Aligned_cols=105 Identities=18% Similarity=0.169 Sum_probs=65.6
Q ss_pred CCeEEEEcCCC---CChhhHHHHHHHHHHCC-CEEEEeCCC----CCCC-CCCC---CCCCCCCHH---HHHHHHHHHHH
Q 025885 24 GPAVLFIHGFP---ELWYSWRNQLLYLSSRG-YRAIAPDLR----GYGD-TDAP---PSVTSYTAL---HLVGDLIGLLD 88 (247)
Q Consensus 24 ~~~vvllHG~~---~~~~~~~~~~~~l~~~g-~~v~~~d~~----G~G~-s~~~---~~~~~~~~~---~~~~~~~~~~~ 88 (247)
.|.+|++||.. ++...-..--..|+++| +-||.+++| ||=. |+.. ......... ...+.+.+-++
T Consensus 94 ~PVmV~IHGG~y~~Gs~s~~~ydgs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n~Gl~DqilALkWV~~NIe 173 (491)
T COG2272 94 LPVMVYIHGGGYIMGSGSEPLYDGSALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASNLGLLDQILALKWVRDNIE 173 (491)
T ss_pred CcEEEEEeccccccCCCcccccChHHHHhcCCEEEEEeCcccccceeeehhhccccccccccccHHHHHHHHHHHHHHHH
Confidence 48999999963 34433334456677787 888888876 3211 1111 000111222 22356677777
Q ss_pred HhCC--ceEEEEEechhHHHHHHHHHhCC---CceeEEEEecCCCC
Q 025885 89 KLGI--HQVFLVGHDWGALIAWYFCLFRP---DRVKALVNMSVPFP 129 (247)
Q Consensus 89 ~l~~--~~~~lvGhS~Gg~~a~~~a~~~p---~~v~~lv~~~~~~~ 129 (247)
++|- ++|+|.|+|.||+.+..+.+. | ..++++|+.|++..
T Consensus 174 ~FGGDp~NVTl~GeSAGa~si~~Lla~-P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 174 AFGGDPQNVTLFGESAGAASILTLLAV-PSAKGLFHRAIALSGAAS 218 (491)
T ss_pred HhCCCccceEEeeccchHHHHHHhhcC-ccchHHHHHHHHhCCCCC
Confidence 8875 479999999999988777654 4 35777788877654
No 174
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=96.95 E-value=0.012 Score=51.41 Aligned_cols=102 Identities=18% Similarity=0.195 Sum_probs=64.3
Q ss_pred CCeEEEEcCCCCChhhHH-------HHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEE
Q 025885 24 GPAVLFIHGFPELWYSWR-------NQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVF 96 (247)
Q Consensus 24 ~~~vvllHG~~~~~~~~~-------~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 96 (247)
.|.||++||++=.-.... .+...|. ...++++|..-.... ......+....+.++-...+++..|.++++
T Consensus 122 DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~--~~SILvLDYsLt~~~-~~~~~yPtQL~qlv~~Y~~Lv~~~G~~nI~ 198 (374)
T PF10340_consen 122 DPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP--EVSILVLDYSLTSSD-EHGHKYPTQLRQLVATYDYLVESEGNKNII 198 (374)
T ss_pred CcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC--CCeEEEEeccccccc-cCCCcCchHHHHHHHHHHHHHhccCCCeEE
Confidence 588999999853322222 2222332 357888887543200 011113445667777777777777889999
Q ss_pred EEEechhHHHHHHHHHh--CCC---ceeEEEEecCCC
Q 025885 97 LVGHDWGALIAWYFCLF--RPD---RVKALVNMSVPF 128 (247)
Q Consensus 97 lvGhS~Gg~~a~~~a~~--~p~---~v~~lv~~~~~~ 128 (247)
|+|-|.||.+++.+... .++ .-+++|+++|-.
T Consensus 199 LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv 235 (374)
T PF10340_consen 199 LMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWV 235 (374)
T ss_pred EEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCc
Confidence 99999999999887653 211 247888888643
No 175
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=96.81 E-value=0.0059 Score=53.17 Aligned_cols=83 Identities=20% Similarity=0.203 Sum_probs=59.9
Q ss_pred eEEEEcCCCCChhhHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----CCceEEEEEec
Q 025885 26 AVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKL----GIHQVFLVGHD 101 (247)
Q Consensus 26 ~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~l----~~~~~~lvGhS 101 (247)
.-||+.|=++-..-=+.+...|+++|+.|+.+|-.-|=.|.+ +.++.++|+..+++.. +.+++.|+|.|
T Consensus 262 ~av~~SGDGGWr~lDk~v~~~l~~~gvpVvGvdsLRYfW~~r-------tPe~~a~Dl~r~i~~y~~~w~~~~~~liGyS 334 (456)
T COG3946 262 VAVFYSGDGGWRDLDKEVAEALQKQGVPVVGVDSLRYFWSER-------TPEQIAADLSRLIRFYARRWGAKRVLLIGYS 334 (456)
T ss_pred EEEEEecCCchhhhhHHHHHHHHHCCCceeeeehhhhhhccC-------CHHHHHHHHHHHHHHHHHhhCcceEEEEeec
Confidence 345666655533333456789999999999999776655544 3467788888887765 56789999999
Q ss_pred hhHHHHHHHHHhCC
Q 025885 102 WGALIAWYFCLFRP 115 (247)
Q Consensus 102 ~Gg~~a~~~a~~~p 115 (247)
+|+=+.-..-.+.|
T Consensus 335 fGADvlP~~~n~L~ 348 (456)
T COG3946 335 FGADVLPFAYNRLP 348 (456)
T ss_pred ccchhhHHHHHhCC
Confidence 99987666555555
No 176
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=96.79 E-value=0.026 Score=46.02 Aligned_cols=50 Identities=20% Similarity=0.256 Sum_probs=38.0
Q ss_pred HHHHHHHHHHhCCceEEEEEechhHHHHHHHHHhC----CCceeEEEEecCCCCC
Q 025885 80 VGDLIGLLDKLGIHQVFLVGHDWGALIAWYFCLFR----PDRVKALVNMSVPFPP 130 (247)
Q Consensus 80 ~~~~~~~~~~l~~~~~~lvGhS~Gg~~a~~~a~~~----p~~v~~lv~~~~~~~~ 130 (247)
.+-+..+++..+. ++++.|||.||.+|...+... .++|.+++..++|...
T Consensus 72 ~~yl~~~~~~~~~-~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPGf~ 125 (224)
T PF11187_consen 72 LAYLKKIAKKYPG-KIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPGFS 125 (224)
T ss_pred HHHHHHHHHhCCC-CEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCCCC
Confidence 3445555555543 599999999999999999874 3578999999888654
No 177
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=96.72 E-value=0.0034 Score=50.41 Aligned_cols=96 Identities=26% Similarity=0.379 Sum_probs=68.4
Q ss_pred CCeEEEEcCCCCChhh---HHHHHHHHHHCCCEEEEeCCC----CCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC----
Q 025885 24 GPAVLFIHGFPELWYS---WRNQLLYLSSRGYRAIAPDLR----GYGDTDAPPSVTSYTALHLVGDLIGLLDKLGI---- 92 (247)
Q Consensus 24 ~~~vvllHG~~~~~~~---~~~~~~~l~~~g~~v~~~d~~----G~G~s~~~~~~~~~~~~~~~~~~~~~~~~l~~---- 92 (247)
..-|||+-|.++.-.. -..+...|.+.+|.++-+-++ |+|.+ +.++-++|+..++++++.
T Consensus 36 ~~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy~G~Gt~---------slk~D~edl~~l~~Hi~~~~fS 106 (299)
T KOG4840|consen 36 SVKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSYNGYGTF---------SLKDDVEDLKCLLEHIQLCGFS 106 (299)
T ss_pred EEEEEEEcccCCCccccccHHHHHHHHhhccceeeeeeccccccccccc---------cccccHHHHHHHHHHhhccCcc
Confidence 3567888887765432 356677888889999999876 34433 445557889999998753
Q ss_pred ceEEEEEechhHHHHHHHHHh--CCCceeEEEEecCCC
Q 025885 93 HQVFLVGHDWGALIAWYFCLF--RPDRVKALVNMSVPF 128 (247)
Q Consensus 93 ~~~~lvGhS~Gg~~a~~~a~~--~p~~v~~lv~~~~~~ 128 (247)
+.|+|+|||-|+.=.+.+... .|..+.+.|+.++..
T Consensus 107 t~vVL~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVS 144 (299)
T KOG4840|consen 107 TDVVLVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVS 144 (299)
T ss_pred cceEEEecCccchHHHHHHHhccchHHHHHHHHhCccc
Confidence 379999999999988888732 355677777666543
No 178
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=96.70 E-value=0.037 Score=43.35 Aligned_cols=54 Identities=24% Similarity=0.194 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHHHHhC-----CceEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCC
Q 025885 76 ALHLVGDLIGLLDKLG-----IHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFP 129 (247)
Q Consensus 76 ~~~~~~~~~~~~~~l~-----~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~~ 129 (247)
.+.-+.+|..+++.|. ..+++++|||+|+.++-..+...+-.+..+|++++|..
T Consensus 87 A~~ga~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG~ 145 (177)
T PF06259_consen 87 ARAGAPRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPGM 145 (177)
T ss_pred HHHHHHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCCC
Confidence 3455566777776662 23699999999999999888886778999999988754
No 179
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=96.65 E-value=0.011 Score=51.62 Aligned_cols=104 Identities=22% Similarity=0.234 Sum_probs=74.5
Q ss_pred CeEEEEcCCCCChhhHHH---HHHHHHH-CCCEEEEeCCCCCCCCCCCCCC--------CCCCHHHHHHHHHHHHHHhCC
Q 025885 25 PAVLFIHGFPELWYSWRN---QLLYLSS-RGYRAIAPDLRGYGDTDAPPSV--------TSYTALHLVGDLIGLLDKLGI 92 (247)
Q Consensus 25 ~~vvllHG~~~~~~~~~~---~~~~l~~-~g~~v~~~d~~G~G~s~~~~~~--------~~~~~~~~~~~~~~~~~~l~~ 92 (247)
-||+|.-|.-++-+.+.. ++..++. .+--+|-++.|=||+|-.-... ...+.++..+|...++.++..
T Consensus 81 gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~lK~ 160 (492)
T KOG2183|consen 81 GPIFFYTGNEGDIEWFANNTGFMWDLAPELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTFLKR 160 (492)
T ss_pred CceEEEeCCcccHHHHHhccchHHhhhHhhCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHHHhh
Confidence 789999998887665532 2333332 2456888899999988432211 112456667788888877743
Q ss_pred ------ceEEEEEechhHHHHHHHHHhCCCceeEEEEecCCC
Q 025885 93 ------HQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPF 128 (247)
Q Consensus 93 ------~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~ 128 (247)
.+|+.+|.|+||+++..+=.++|..|.+...-+.|.
T Consensus 161 ~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSAPv 202 (492)
T KOG2183|consen 161 DLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASAPV 202 (492)
T ss_pred ccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccCce
Confidence 379999999999999999999999888887766664
No 180
>KOG3101 consensus Esterase D [General function prediction only]
Probab=96.60 E-value=0.0029 Score=50.40 Aligned_cols=102 Identities=24% Similarity=0.356 Sum_probs=63.4
Q ss_pred CeEEEEcCCCCChhhHHHH---HHHHHHCCCEEEEeCC--CCC---CCCCCCC-----------CCCC----CCH-HHHH
Q 025885 25 PAVLFIHGFPELWYSWRNQ---LLYLSSRGYRAIAPDL--RGY---GDTDAPP-----------SVTS----YTA-LHLV 80 (247)
Q Consensus 25 ~~vvllHG~~~~~~~~~~~---~~~l~~~g~~v~~~d~--~G~---G~s~~~~-----------~~~~----~~~-~~~~ 80 (247)
|++.++.|...+...+..- -....+.|..|++||- ||. |.++.-. .... |.+ +-+.
T Consensus 45 P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGFYvnAt~epw~~~yrMYdYv~ 124 (283)
T KOG3101|consen 45 PVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGFYVNATQEPWAKHYRMYDYVV 124 (283)
T ss_pred ceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCceeEEecccchHhhhhhHHHHHH
Confidence 7888999998887766432 2334456899999984 554 2221100 0000 111 1223
Q ss_pred HHHHHHHHHh----CCceEEEEEechhHHHHHHHHHhCCCceeEEEEecC
Q 025885 81 GDLIGLLDKL----GIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSV 126 (247)
Q Consensus 81 ~~~~~~~~~l----~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~ 126 (247)
+.+.+++... ...++.+.||||||.=|+..+.+.|.+.+++-..++
T Consensus 125 kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAP 174 (283)
T KOG3101|consen 125 KELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAP 174 (283)
T ss_pred HHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceecccc
Confidence 3444444421 234799999999999999999999998877766554
No 181
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.57 E-value=0.0055 Score=49.95 Aligned_cols=23 Identities=22% Similarity=0.320 Sum_probs=19.7
Q ss_pred CCceEEEEEechhHHHHHHHHHh
Q 025885 91 GIHQVFLVGHDWGALIAWYFCLF 113 (247)
Q Consensus 91 ~~~~~~lvGhS~Gg~~a~~~a~~ 113 (247)
...++++.|||+||.+|..++..
T Consensus 126 p~~~i~vtGHSLGGaiA~l~a~~ 148 (229)
T cd00519 126 PDYKIIVTGHSLGGALASLLALD 148 (229)
T ss_pred CCceEEEEccCHHHHHHHHHHHH
Confidence 34589999999999999988775
No 182
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=96.51 E-value=0.027 Score=46.24 Aligned_cols=78 Identities=22% Similarity=0.310 Sum_probs=50.8
Q ss_pred hhHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHH----HHHHHHHh----CC----ceEEEEEechhHH
Q 025885 38 YSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGD----LIGLLDKL----GI----HQVFLVGHDWGAL 105 (247)
Q Consensus 38 ~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~----~~~~~~~l----~~----~~~~lvGhS~Gg~ 105 (247)
-.|+.+.+.|+++||.|++.-+. ..++...++.. ....++.+ +. -+++-||||+|+-
T Consensus 34 itYr~lLe~La~~Gy~ViAtPy~-----------~tfDH~~~A~~~~~~f~~~~~~L~~~~~~~~~~lP~~~vGHSlGck 102 (250)
T PF07082_consen 34 ITYRYLLERLADRGYAVIATPYV-----------VTFDHQAIAREVWERFERCLRALQKRGGLDPAYLPVYGVGHSLGCK 102 (250)
T ss_pred HHHHHHHHHHHhCCcEEEEEecC-----------CCCcHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCeeeeecccchH
Confidence 46889999999999999986542 11222223322 22223222 22 2578899999999
Q ss_pred HHHHHHHhCCCceeEEEEecC
Q 025885 106 IAWYFCLFRPDRVKALVNMSV 126 (247)
Q Consensus 106 ~a~~~a~~~p~~v~~lv~~~~ 126 (247)
+-..+...++..-++-|+++-
T Consensus 103 lhlLi~s~~~~~r~gniliSF 123 (250)
T PF07082_consen 103 LHLLIGSLFDVERAGNILISF 123 (250)
T ss_pred HHHHHhhhccCcccceEEEec
Confidence 988888777655567777763
No 183
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=96.40 E-value=0.046 Score=49.33 Aligned_cols=79 Identities=19% Similarity=0.224 Sum_probs=55.2
Q ss_pred HHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-----CCceEEEEEechhHHHHHHHHHhCCCc
Q 025885 43 QLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKL-----GIHQVFLVGHDWGALIAWYFCLFRPDR 117 (247)
Q Consensus 43 ~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~l-----~~~~~~lvGhS~Gg~~a~~~a~~~p~~ 117 (247)
+...| ..|+.|+.+... ..|. ...+..+.+.....+++.. +..+.+|||.+.||..+..+|+.+|+.
T Consensus 93 vG~AL-~~GHPvYFV~F~-----p~P~--pgQTl~DV~~ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd~ 164 (581)
T PF11339_consen 93 VGVAL-RAGHPVYFVGFF-----PEPE--PGQTLEDVMRAEAAFVEEVAERHPDAPKPNLIGNCQGGWAAMMLAALRPDL 164 (581)
T ss_pred HHHHH-HcCCCeEEEEec-----CCCC--CCCcHHHHHHHHHHHHHHHHHhCCCCCCceEEeccHHHHHHHHHHhcCcCc
Confidence 33445 459998877653 1121 2335666655555555544 223899999999999999999999999
Q ss_pred eeEEEEecCCCC
Q 025885 118 VKALVNMSVPFP 129 (247)
Q Consensus 118 v~~lv~~~~~~~ 129 (247)
+.-+|+.++|..
T Consensus 165 ~gplvlaGaPls 176 (581)
T PF11339_consen 165 VGPLVLAGAPLS 176 (581)
T ss_pred cCceeecCCCcc
Confidence 999998877754
No 184
>PLN02162 triacylglycerol lipase
Probab=96.36 E-value=0.0099 Score=53.02 Aligned_cols=51 Identities=20% Similarity=0.257 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHhCCceEEEEEechhHHHHHHHHHh---C-----CCceeEEEEecCCC
Q 025885 78 HLVGDLIGLLDKLGIHQVFLVGHDWGALIAWYFCLF---R-----PDRVKALVNMSVPF 128 (247)
Q Consensus 78 ~~~~~~~~~~~~l~~~~~~lvGhS~Gg~~a~~~a~~---~-----p~~v~~lv~~~~~~ 128 (247)
.+.+.+.+++......++++.|||+||++|..+|.. + .+++.+++..+.|-
T Consensus 263 ~I~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa~L~~~~~~~l~~~~~~vYTFGqPR 321 (475)
T PLN02162 263 TIRQMLRDKLARNKNLKYILTGHSLGGALAALFPAILAIHGEDELLDKLEGIYTFGQPR 321 (475)
T ss_pred HHHHHHHHHHHhCCCceEEEEecChHHHHHHHHHHHHHHccccccccccceEEEeCCCC
Confidence 444555556665555689999999999999887642 2 12345677776553
No 185
>PLN00413 triacylglycerol lipase
Probab=96.26 E-value=0.013 Score=52.43 Aligned_cols=51 Identities=20% Similarity=0.383 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHhCCceEEEEEechhHHHHHHHHHh---C-----CCceeEEEEecCCC
Q 025885 78 HLVGDLIGLLDKLGIHQVFLVGHDWGALIAWYFCLF---R-----PDRVKALVNMSVPF 128 (247)
Q Consensus 78 ~~~~~~~~~~~~l~~~~~~lvGhS~Gg~~a~~~a~~---~-----p~~v~~lv~~~~~~ 128 (247)
++.+.+.++++.....++++.|||+||++|..+|.. + ..++.+++..+.|-
T Consensus 269 ~i~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~~L~~~~~~~~~~ri~~VYTFG~PR 327 (479)
T PLN00413 269 TILRHLKEIFDQNPTSKFILSGHSLGGALAILFTAVLIMHDEEEMLERLEGVYTFGQPR 327 (479)
T ss_pred HHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHHHHHhccchhhccccceEEEeCCCC
Confidence 455667777777666689999999999999988752 1 22455677776653
No 186
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=96.18 E-value=0.015 Score=47.00 Aligned_cols=35 Identities=23% Similarity=0.305 Sum_probs=30.7
Q ss_pred ceEEEEEechhHHHHHHHHHhCCCceeEEEEecCCC
Q 025885 93 HQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPF 128 (247)
Q Consensus 93 ~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~ 128 (247)
++|.|+|.|.||-+|+.+|+.+| .|+++|.++++.
T Consensus 22 ~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~ 56 (213)
T PF08840_consen 22 DKIGIIGISKGAELALLLASRFP-QISAVVAISPSS 56 (213)
T ss_dssp SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--S
T ss_pred CCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCce
Confidence 58999999999999999999999 699999988654
No 187
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=95.98 E-value=0.022 Score=47.92 Aligned_cols=35 Identities=29% Similarity=0.482 Sum_probs=31.6
Q ss_pred eEEEEEechhHHHHHHHHHhCCCceeEEEEecCCC
Q 025885 94 QVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPF 128 (247)
Q Consensus 94 ~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~ 128 (247)
.-+|.|-|+||.+++..+..+|+++..++..|+.+
T Consensus 178 ~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~ 212 (299)
T COG2382 178 GRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSF 212 (299)
T ss_pred CcEEeccccccHHHHHHHhcCchhhceeeccCCcc
Confidence 47899999999999999999999999999887654
No 188
>PLN02454 triacylglycerol lipase
Probab=95.88 E-value=0.023 Score=50.15 Aligned_cols=35 Identities=26% Similarity=0.379 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHhCCc--eEEEEEechhHHHHHHHHHh
Q 025885 79 LVGDLIGLLDKLGIH--QVFLVGHDWGALIAWYFCLF 113 (247)
Q Consensus 79 ~~~~~~~~~~~l~~~--~~~lvGhS~Gg~~a~~~a~~ 113 (247)
+...+..+++..... +++++|||+||++|...|..
T Consensus 212 vl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 212 LLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 334444455444333 49999999999999998854
No 189
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=95.86 E-value=0.093 Score=42.26 Aligned_cols=102 Identities=24% Similarity=0.194 Sum_probs=59.3
Q ss_pred CCeEEEEcCCCCChhhHHHHH----HHHHHCCCEEEEeCCCC----CCCC--------CCCCC---------------CC
Q 025885 24 GPAVLFIHGFPELWYSWRNQL----LYLSSRGYRAIAPDLRG----YGDT--------DAPPS---------------VT 72 (247)
Q Consensus 24 ~~~vvllHG~~~~~~~~~~~~----~~l~~~g~~v~~~d~~G----~G~s--------~~~~~---------------~~ 72 (247)
++-||+||||-++...++.-. +.+.+. +.++.+|-|- -+.+ +.+.+ ..
T Consensus 5 k~rvLcLHGfrQsg~~F~~Ktg~~rK~l~k~-~el~f~~aPh~~~~~~~~~~~~~~~~~a~~~~~~~~~~Wf~~n~~~~~ 83 (230)
T KOG2551|consen 5 KLRVLCLHGFRQSGKVFSEKTGSLRKLLKKL-AELVFPDAPHELPKADLPDSEREKKFDAPPDVEQNRYGWFSNNEASFT 83 (230)
T ss_pred CceEEEecchhhccHHHHHHhhhHHHHHHhh-heEEecCCCccCCcccCCcccccccccCCcccccchhhhhcccccccc
Confidence 567999999999987765543 233333 6666666551 0000 01110 00
Q ss_pred -CCCHHHHHHHHHHHHHHhCCceEEEEEechhHHHHHHHHHh---------CCCceeEEEEecCCC
Q 025885 73 -SYTALHLVGDLIGLLDKLGIHQVFLVGHDWGALIAWYFCLF---------RPDRVKALVNMSVPF 128 (247)
Q Consensus 73 -~~~~~~~~~~~~~~~~~l~~~~~~lvGhS~Gg~~a~~~a~~---------~p~~v~~lv~~~~~~ 128 (247)
....+.-.+-+.+.+...|. ==.|+|+|.|+.++..++.. +| .++-+|++++-.
T Consensus 84 ~~~~~eesl~yl~~~i~enGP-FDGllGFSQGA~laa~l~~~~~~~~~~~~~P-~~kF~v~~SGf~ 147 (230)
T KOG2551|consen 84 EYFGFEESLEYLEDYIKENGP-FDGLLGFSQGAALAALLAGLGQKGLPYVKQP-PFKFAVFISGFK 147 (230)
T ss_pred cccChHHHHHHHHHHHHHhCC-CccccccchhHHHHHHhhcccccCCcccCCC-CeEEEEEEecCC
Confidence 11233444555555665552 13689999999999988872 12 367777777543
No 190
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=95.69 E-value=0.14 Score=46.01 Aligned_cols=121 Identities=14% Similarity=0.111 Sum_probs=69.9
Q ss_pred EEEEeC---CEEEEEEeeC------CCCeEEEEcCCCCChhhHHHHH---HH-------------HHH------CCCEEE
Q 025885 7 TTVATN---GINMHVASIG------TGPAVLFIHGFPELWYSWRNQL---LY-------------LSS------RGYRAI 55 (247)
Q Consensus 7 ~~~~~~---g~~~~~~~~g------~~~~vvllHG~~~~~~~~~~~~---~~-------------l~~------~g~~v~ 55 (247)
-+++++ +..++|+-.. +.|.||.+-|.||.+..+..+. +. +.. +-.+++
T Consensus 40 Gy~~v~~~~~~~lfy~f~es~~~~~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anll 119 (433)
T PLN03016 40 GYIGIGEDENVQFFYYFIKSENNPKEDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTKMANII 119 (433)
T ss_pred EEEEecCCCCeEEEEEEEecCCCcccCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccCCCCCceeeCCCchhhcCcEE
Confidence 455553 4667776322 3589999999999887542221 11 110 125688
Q ss_pred EeC-CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-------CCceEEEEEechhHHHHHHHHHh----C------CCc
Q 025885 56 APD-LRGYGDTDAPPSVTSYTALHLVGDLIGLLDKL-------GIHQVFLVGHDWGALIAWYFCLF----R------PDR 117 (247)
Q Consensus 56 ~~d-~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~l-------~~~~~~lvGhS~Gg~~a~~~a~~----~------p~~ 117 (247)
-+| .-|.|.|.........+-.+.++++..++... ...+++|.|.|+||..+-.+|.. . +-.
T Consensus 120 fiDqPvGtGfSy~~~~~~~~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~in 199 (433)
T PLN03016 120 FLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPIN 199 (433)
T ss_pred EecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCCccc
Confidence 889 55888885432111111112234555444432 23579999999999876666543 1 124
Q ss_pred eeEEEEecCC
Q 025885 118 VKALVNMSVP 127 (247)
Q Consensus 118 v~~lv~~~~~ 127 (247)
++++++-++.
T Consensus 200 LkGi~iGNg~ 209 (433)
T PLN03016 200 LQGYMLGNPV 209 (433)
T ss_pred ceeeEecCCC
Confidence 6788876653
No 191
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=95.68 E-value=0.032 Score=43.88 Aligned_cols=51 Identities=22% Similarity=0.148 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHhCCceEEEEEechhHHHHHHHHHh------CCCceeEEEEecCCCC
Q 025885 79 LVGDLIGLLDKLGIHQVFLVGHDWGALIAWYFCLF------RPDRVKALVNMSVPFP 129 (247)
Q Consensus 79 ~~~~~~~~~~~l~~~~~~lvGhS~Gg~~a~~~a~~------~p~~v~~lv~~~~~~~ 129 (247)
+.+.+.+......-.+++|+|+|.|+.++..++.. ..++|.++++++-|..
T Consensus 67 ~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP~~ 123 (179)
T PF01083_consen 67 LVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDPRR 123 (179)
T ss_dssp HHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-TTT
T ss_pred HHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEEecCCcc
Confidence 33344444444455689999999999999999877 2357999999987654
No 192
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=95.65 E-value=0.16 Score=45.57 Aligned_cols=107 Identities=19% Similarity=0.274 Sum_probs=76.9
Q ss_pred CCCeEEEEcCCCCChhhHH-----HHHHHHHHCCCEEEEeCCCCCCCCCCCCCC-----CCCCHHHHHHHHHHHHHHhCC
Q 025885 23 TGPAVLFIHGFPELWYSWR-----NQLLYLSSRGYRAIAPDLRGYGDTDAPPSV-----TSYTALHLVGDLIGLLDKLGI 92 (247)
Q Consensus 23 ~~~~vvllHG~~~~~~~~~-----~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~-----~~~~~~~~~~~~~~~~~~l~~ 92 (247)
.+|..|+|-|=+.....|- .++....+-|-.|+..+.|=||.|....+. ...+..+...|+..++++++.
T Consensus 85 ~gPiFLmIGGEgp~~~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~n~ 164 (514)
T KOG2182|consen 85 GGPIFLMIGGEGPESDKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAMNA 164 (514)
T ss_pred CCceEEEEcCCCCCCCCccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHHHh
Confidence 4677777777544444441 223333445889999999999988543321 123566778899999888732
Q ss_pred -------ceEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCC
Q 025885 93 -------HQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFP 129 (247)
Q Consensus 93 -------~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~~ 129 (247)
.+++..|-|+-|.++..+=..+|+.+.+.|.-++|..
T Consensus 165 k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSapv~ 208 (514)
T KOG2182|consen 165 KFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAPVL 208 (514)
T ss_pred hcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeeccccccee
Confidence 2799999999999999999999999999988777654
No 193
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=95.61 E-value=0.022 Score=47.22 Aligned_cols=47 Identities=19% Similarity=0.292 Sum_probs=37.4
Q ss_pred HHHHHHHHH---hCCceEEEEEechhHHHHHHHHHhCCCceeEEEEecCC
Q 025885 81 GDLIGLLDK---LGIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVP 127 (247)
Q Consensus 81 ~~~~~~~~~---l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~ 127 (247)
+++.-+++. .+.++-.++|||+||.+++.....+|+.+...+++++.
T Consensus 122 ~~lkP~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPS 171 (264)
T COG2819 122 EQLKPFIEARYRTNSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPS 171 (264)
T ss_pred HhhHHHHhcccccCcccceeeeecchhHHHHHHHhcCcchhceeeeecch
Confidence 344444544 13456899999999999999999999999999998764
No 194
>PLN02209 serine carboxypeptidase
Probab=95.55 E-value=0.21 Score=45.00 Aligned_cols=121 Identities=15% Similarity=0.130 Sum_probs=70.9
Q ss_pred EEEEeC---CEEEEEEeeC------CCCeEEEEcCCCCChhhHHHHHH----------------HHHH------CCCEEE
Q 025885 7 TTVATN---GINMHVASIG------TGPAVLFIHGFPELWYSWRNQLL----------------YLSS------RGYRAI 55 (247)
Q Consensus 7 ~~~~~~---g~~~~~~~~g------~~~~vvllHG~~~~~~~~~~~~~----------------~l~~------~g~~v~ 55 (247)
-+++++ +..++|+-.. +.|.|+.+-|.||.+..+..+.+ .+.. +-.+++
T Consensus 42 Gy~~v~~~~~~~lf~~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anll 121 (437)
T PLN02209 42 GYIGIGEEENVQFFYYFIKSDKNPQEDPLIIWLNGGPGCSCLSGLFFENGPLALKNKVYNGSVPSLVSTTYSWTKTANII 121 (437)
T ss_pred EEEEecCCCCeEEEEEEEecCCCCCCCCEEEEECCCCcHHHhhhHHHhcCCceeccCCCCCCcccceeCCCchhhcCcEE
Confidence 345553 4567665322 35899999999999876643321 1111 124688
Q ss_pred EeC-CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-------CCceEEEEEechhHHHHHHHHHh----C------CCc
Q 025885 56 APD-LRGYGDTDAPPSVTSYTALHLVGDLIGLLDKL-------GIHQVFLVGHDWGALIAWYFCLF----R------PDR 117 (247)
Q Consensus 56 ~~d-~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~l-------~~~~~~lvGhS~Gg~~a~~~a~~----~------p~~ 117 (247)
-+| ..|.|.|.........+.++.++|+..++... ...+++|.|.|+||..+-.+|.. . +=.
T Consensus 122 fiDqPvGtGfSy~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~in 201 (437)
T PLN02209 122 FLDQPVGSGFSYSKTPIERTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPIN 201 (437)
T ss_pred EecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCcee
Confidence 889 55888875332111122223346666555543 22479999999999866666543 1 114
Q ss_pred eeEEEEecCC
Q 025885 118 VKALVNMSVP 127 (247)
Q Consensus 118 v~~lv~~~~~ 127 (247)
++++++.++-
T Consensus 202 l~Gi~igng~ 211 (437)
T PLN02209 202 LQGYVLGNPI 211 (437)
T ss_pred eeeEEecCcc
Confidence 6788876653
No 195
>PLN02310 triacylglycerol lipase
Probab=95.55 E-value=0.042 Score=48.50 Aligned_cols=52 Identities=15% Similarity=0.249 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHHHhC---C-ceEEEEEechhHHHHHHHHHh----CCCceeEEEEecCCC
Q 025885 77 LHLVGDLIGLLDKLG---I-HQVFLVGHDWGALIAWYFCLF----RPDRVKALVNMSVPF 128 (247)
Q Consensus 77 ~~~~~~~~~~~~~l~---~-~~~~lvGhS~Gg~~a~~~a~~----~p~~v~~lv~~~~~~ 128 (247)
+++.+.+..+++.+. . .+++++|||+||++|...|.. .+..--.++..+.|-
T Consensus 189 ~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~dl~~~~~~~~v~vyTFGsPR 248 (405)
T PLN02310 189 EQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYEAATTIPDLFVSVISFGAPR 248 (405)
T ss_pred HHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHHHHHhCcCcceeEEEecCCC
Confidence 445566677776552 2 379999999999999888753 333223456666553
No 196
>PLN02408 phospholipase A1
Probab=95.54 E-value=0.021 Score=49.69 Aligned_cols=36 Identities=22% Similarity=0.297 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHhCCc--eEEEEEechhHHHHHHHHHh
Q 025885 78 HLVGDLIGLLDKLGIH--QVFLVGHDWGALIAWYFCLF 113 (247)
Q Consensus 78 ~~~~~~~~~~~~l~~~--~~~lvGhS~Gg~~a~~~a~~ 113 (247)
++.+.+..+++..+.+ ++++.|||+||++|...|..
T Consensus 183 qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~d 220 (365)
T PLN02408 183 MVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYD 220 (365)
T ss_pred HHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHH
Confidence 4455666666665433 59999999999999988765
No 197
>PLN02571 triacylglycerol lipase
Probab=95.52 E-value=0.023 Score=50.25 Aligned_cols=37 Identities=19% Similarity=0.253 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHHHhCCc--eEEEEEechhHHHHHHHHHh
Q 025885 77 LHLVGDLIGLLDKLGIH--QVFLVGHDWGALIAWYFCLF 113 (247)
Q Consensus 77 ~~~~~~~~~~~~~l~~~--~~~lvGhS~Gg~~a~~~a~~ 113 (247)
+++.+++..+++....+ ++++.|||+||++|...|..
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 45666777777765433 68999999999999988864
No 198
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=95.42 E-value=0.22 Score=43.92 Aligned_cols=34 Identities=15% Similarity=0.219 Sum_probs=30.6
Q ss_pred eEEEEEechhHHHHHHHHHhCCCceeEEEEecCC
Q 025885 94 QVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVP 127 (247)
Q Consensus 94 ~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~ 127 (247)
+++++|+|.||.+|..+|.-.|..+.+++=-++.
T Consensus 185 p~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~ 218 (403)
T PF11144_consen 185 PKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSY 218 (403)
T ss_pred cEEEEecCcHHHHHHHHHhhCccceeEEEecCcc
Confidence 7999999999999999999999999999866543
No 199
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=95.36 E-value=0.025 Score=49.35 Aligned_cols=87 Identities=18% Similarity=0.253 Sum_probs=52.5
Q ss_pred CCeEEEEcCCCC-ChhhHHHHHHHHHHCCCEEEEeCCCCCC-CCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEec
Q 025885 24 GPAVLFIHGFPE-LWYSWRNQLLYLSSRGYRAIAPDLRGYG-DTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVFLVGHD 101 (247)
Q Consensus 24 ~~~vvllHG~~~-~~~~~~~~~~~l~~~g~~v~~~d~~G~G-~s~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~lvGhS 101 (247)
+-.+|+.||.-+ +...|...+...... +.=.....+|+- ......+....--..+++++.+.+....++++.+||||
T Consensus 80 ~HLvVlthGi~~~~~~~~~~~~~~~~kk-~p~~~iv~~g~~~~~~~T~~Gv~~lG~Rla~~~~e~~~~~si~kISfvghS 158 (405)
T KOG4372|consen 80 KHLVVLTHGLHGADMEYWKEKIEQMTKK-MPDKLIVVRGKMNNMCQTFDGVDVLGERLAEEVKETLYDYSIEKISFVGHS 158 (405)
T ss_pred ceEEEeccccccccHHHHHHHHHhhhcC-CCcceEeeeccccchhhccccceeeecccHHHHhhhhhccccceeeeeeee
Confidence 357999999988 667787777776654 221122233332 11111111112223456666666666678899999999
Q ss_pred hhHHHHHHHH
Q 025885 102 WGALIAWYFC 111 (247)
Q Consensus 102 ~Gg~~a~~~a 111 (247)
.||.++..+.
T Consensus 159 LGGLvar~AI 168 (405)
T KOG4372|consen 159 LGGLVARYAI 168 (405)
T ss_pred cCCeeeeEEE
Confidence 9999876554
No 200
>PLN02934 triacylglycerol lipase
Probab=95.35 E-value=0.052 Score=49.05 Aligned_cols=35 Identities=23% Similarity=0.317 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHhCCceEEEEEechhHHHHHHHHH
Q 025885 78 HLVGDLIGLLDKLGIHQVFLVGHDWGALIAWYFCL 112 (247)
Q Consensus 78 ~~~~~~~~~~~~l~~~~~~lvGhS~Gg~~a~~~a~ 112 (247)
++...+.++++.....++++.|||+||++|..+|.
T Consensus 306 ~v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 306 AVRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHH
Confidence 45566677777666668999999999999998874
No 201
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=95.23 E-value=0.013 Score=53.81 Aligned_cols=101 Identities=23% Similarity=0.251 Sum_probs=65.7
Q ss_pred CCCeEEEEcCCCCCh--hhHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC--CCCCCCHHHHHHHHHHHHHHh---C---C
Q 025885 23 TGPAVLFIHGFPELW--YSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPP--SVTSYTALHLVGDLIGLLDKL---G---I 92 (247)
Q Consensus 23 ~~~~vvllHG~~~~~--~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~--~~~~~~~~~~~~~~~~~~~~l---~---~ 92 (247)
+.|.+|..+|.-+-. -.|+.--..|.+.|+-....|.||=|+-...- +.......+-.+|..+-.+.| | .
T Consensus 469 ~~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VRGGGe~G~~WHk~G~lakKqN~f~Dfia~AeyLve~gyt~~ 548 (712)
T KOG2237|consen 469 SKPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVRGGGEYGEQWHKDGRLAKKQNSFDDFIACAEYLVENGYTQP 548 (712)
T ss_pred CCceEEEEecccceeeccccccceeEEEecceEEEEEeeccCcccccchhhccchhhhcccHHHHHHHHHHHHHcCCCCc
Confidence 467777777754433 23544333445578888888999976533211 101122334445666655655 3 3
Q ss_pred ceEEEEEechhHHHHHHHHHhCCCceeEEEE
Q 025885 93 HQVFLVGHDWGALIAWYFCLFRPDRVKALVN 123 (247)
Q Consensus 93 ~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~ 123 (247)
++..+.|.|.||.++-.+...+|+.+.++|+
T Consensus 549 ~kL~i~G~SaGGlLvga~iN~rPdLF~avia 579 (712)
T KOG2237|consen 549 SKLAIEGGSAGGLLVGACINQRPDLFGAVIA 579 (712)
T ss_pred cceeEecccCccchhHHHhccCchHhhhhhh
Confidence 5799999999999999999999998887775
No 202
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=95.19 E-value=0.13 Score=41.42 Aligned_cols=79 Identities=20% Similarity=0.229 Sum_probs=52.0
Q ss_pred CCeEEEEcCCCCChhhHHHHHHHHHHCCCEE-EEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEech
Q 025885 24 GPAVLFIHGFPELWYSWRNQLLYLSSRGYRA-IAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVFLVGHDW 102 (247)
Q Consensus 24 ~~~vvllHG~~~~~~~~~~~~~~l~~~g~~v-~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~lvGhS~ 102 (247)
...|||+-||+.+...+.++.. ..++.| ++.|++..-. +. | ..+.+.+.||++||
T Consensus 11 ~~LilfF~GWg~d~~~f~hL~~---~~~~D~l~~yDYr~l~~----------d~-----~------~~~y~~i~lvAWSm 66 (213)
T PF04301_consen 11 KELILFFAGWGMDPSPFSHLIL---PENYDVLICYDYRDLDF----------DF-----D------LSGYREIYLVAWSM 66 (213)
T ss_pred CeEEEEEecCCCChHHhhhccC---CCCccEEEEecCccccc----------cc-----c------cccCceEEEEEEeH
Confidence 4789999999998877766531 234655 4667763210 10 1 12467999999999
Q ss_pred hHHHHHHHHHhCCCceeEEEEecCCC
Q 025885 103 GALIAWYFCLFRPDRVKALVNMSVPF 128 (247)
Q Consensus 103 Gg~~a~~~a~~~p~~v~~lv~~~~~~ 128 (247)
|-.+|..+....| ++..|.+++..
T Consensus 67 GVw~A~~~l~~~~--~~~aiAINGT~ 90 (213)
T PF04301_consen 67 GVWAANRVLQGIP--FKRAIAINGTP 90 (213)
T ss_pred HHHHHHHHhccCC--cceeEEEECCC
Confidence 9999988866544 55555555443
No 203
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=95.15 E-value=0.2 Score=45.10 Aligned_cols=120 Identities=15% Similarity=0.039 Sum_probs=71.9
Q ss_pred EEEEeC---CEEEEEEeeC------CCCeEEEEcCCCCChhhHHHHHHHHH-----HC-------------CCEEEEeCC
Q 025885 7 TTVATN---GINMHVASIG------TGPAVLFIHGFPELWYSWRNQLLYLS-----SR-------------GYRAIAPDL 59 (247)
Q Consensus 7 ~~~~~~---g~~~~~~~~g------~~~~vvllHG~~~~~~~~~~~~~~l~-----~~-------------g~~v~~~d~ 59 (247)
-+++++ +..|+|+-.. +.|.||.+-|+||.+..- .++.++- .. -..++-.|.
T Consensus 47 GYv~v~~~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl~-G~~~E~GPf~v~~~G~tL~~N~ySWnk~aNiLfLd~ 125 (454)
T KOG1282|consen 47 GYVTVNESEGRQLFYWFFESENNPETDPLVLWLNGGPGCSSLG-GLFEENGPFRVKYNGKTLYLNPYSWNKEANILFLDQ 125 (454)
T ss_pred ceEECCCCCCceEEEEEEEccCCCCCCCEEEEeCCCCCccchh-hhhhhcCCeEEcCCCCcceeCCccccccccEEEEec
Confidence 467775 7889987322 368899999999987544 3332211 01 135777776
Q ss_pred C-CCCCCCCCCC-CCCCCHHHHHHHHHHHHHHh-------CCceEEEEEechhHHHHHHHHHh----CC------CceeE
Q 025885 60 R-GYGDTDAPPS-VTSYTALHLVGDLIGLLDKL-------GIHQVFLVGHDWGALIAWYFCLF----RP------DRVKA 120 (247)
Q Consensus 60 ~-G~G~s~~~~~-~~~~~~~~~~~~~~~~~~~l-------~~~~~~lvGhS~Gg~~a~~~a~~----~p------~~v~~ 120 (247)
| |.|.|-.... ....+.+..++|+..++... .-+++++.|-|.+|...-.+|.. +. -.+++
T Consensus 126 PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNLkG 205 (454)
T KOG1282|consen 126 PVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINLKG 205 (454)
T ss_pred CCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCcccceE
Confidence 6 7776643221 11234455566665555432 23579999999999776666643 21 24677
Q ss_pred EEEecCC
Q 025885 121 LVNMSVP 127 (247)
Q Consensus 121 lv~~~~~ 127 (247)
+++-++-
T Consensus 206 ~~IGNg~ 212 (454)
T KOG1282|consen 206 YAIGNGL 212 (454)
T ss_pred EEecCcc
Confidence 7765443
No 204
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=95.15 E-value=0.077 Score=45.98 Aligned_cols=40 Identities=38% Similarity=0.581 Sum_probs=32.0
Q ss_pred CCceEEEEEechhHHHHHHHHHhCCC-----ceeEEEEecCCCCC
Q 025885 91 GIHQVFLVGHDWGALIAWYFCLFRPD-----RVKALVNMSVPFPP 130 (247)
Q Consensus 91 ~~~~~~lvGhS~Gg~~a~~~a~~~p~-----~v~~lv~~~~~~~~ 130 (247)
|..+++|||||+|+.+...+...-.+ .|+.+++++.|.+.
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~ 262 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPS 262 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCC
Confidence 56689999999999998887665443 38999999987654
No 205
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=95.11 E-value=0.095 Score=48.44 Aligned_cols=105 Identities=18% Similarity=0.150 Sum_probs=57.3
Q ss_pred CCeEEEEcCCCC---ChhhHHHH--HHHHHHCCCEEEEeCCC----CCCCCCCCCCCCCCCHHHHH---HHHHHHHHHhC
Q 025885 24 GPAVLFIHGFPE---LWYSWRNQ--LLYLSSRGYRAIAPDLR----GYGDTDAPPSVTSYTALHLV---GDLIGLLDKLG 91 (247)
Q Consensus 24 ~~~vvllHG~~~---~~~~~~~~--~~~l~~~g~~v~~~d~~----G~G~s~~~~~~~~~~~~~~~---~~~~~~~~~l~ 91 (247)
-|++|++||.+- ++.++... ...+..+..-|+.+..| |+...........+...++. +.+.+-+...|
T Consensus 112 ~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~~gN~gl~Dq~~AL~wv~~~I~~FG 191 (545)
T KOG1516|consen 112 LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSAAPGNLGLFDQLLALRWVKDNIPSFG 191 (545)
T ss_pred CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecCCCCCCCcccHHHHHHHHHHHHHHHHhcC
Confidence 488999999753 22223111 22222333456666655 33222211111233333333 34445555554
Q ss_pred --CceEEEEEechhHHHHHHHHHhC--CCceeEEEEecCCC
Q 025885 92 --IHQVFLVGHDWGALIAWYFCLFR--PDRVKALVNMSVPF 128 (247)
Q Consensus 92 --~~~~~lvGhS~Gg~~a~~~a~~~--p~~v~~lv~~~~~~ 128 (247)
.++|++.|||.||..+..+.... ...+.++|.+++..
T Consensus 192 Gdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~~ 232 (545)
T KOG1516|consen 192 GDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGNA 232 (545)
T ss_pred CCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhcccc
Confidence 45899999999999987776532 24567777777654
No 206
>PLN02324 triacylglycerol lipase
Probab=94.97 E-value=0.068 Score=47.24 Aligned_cols=36 Identities=22% Similarity=0.312 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHhCC--ceEEEEEechhHHHHHHHHHh
Q 025885 78 HLVGDLIGLLDKLGI--HQVFLVGHDWGALIAWYFCLF 113 (247)
Q Consensus 78 ~~~~~~~~~~~~l~~--~~~~lvGhS~Gg~~a~~~a~~ 113 (247)
++.+.+..+++.... .+|++.|||+||++|...|..
T Consensus 198 qVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 198 QVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 444556666666543 269999999999999988854
No 207
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=94.91 E-value=0.054 Score=47.58 Aligned_cols=104 Identities=20% Similarity=0.282 Sum_probs=77.7
Q ss_pred CCCeEEEEcCCCCChhhHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC-CCCCCCHHHHHHHHHHHHHHhC---CceEEEE
Q 025885 23 TGPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPP-SVTSYTALHLVGDLIGLLDKLG---IHQVFLV 98 (247)
Q Consensus 23 ~~~~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~-~~~~~~~~~~~~~~~~~~~~l~---~~~~~lv 98 (247)
+.|+|+..-|+.-+....+.-...|.+ -+-+.++.|=++.|...+ +-...++.+.+.|.+.+...+. ..+.+-.
T Consensus 62 drPtV~~T~GY~~~~~p~r~Ept~Lld--~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~iY~~kWIST 139 (448)
T PF05576_consen 62 DRPTVLYTEGYNVSTSPRRSEPTQLLD--GNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKPIYPGKWIST 139 (448)
T ss_pred CCCeEEEecCcccccCccccchhHhhc--cceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHhhccCCceec
Confidence 468888888987765444433333332 467888999999885433 2234577888899988888874 3579999
Q ss_pred EechhHHHHHHHHHhCCCceeEEEEecCCC
Q 025885 99 GHDWGALIAWYFCLFRPDRVKALVNMSVPF 128 (247)
Q Consensus 99 GhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~ 128 (247)
|-|-||+.+..+=..+|+.|++.|.--.|.
T Consensus 140 G~SKGGmTa~y~rrFyP~DVD~tVaYVAP~ 169 (448)
T PF05576_consen 140 GGSKGGMTAVYYRRFYPDDVDGTVAYVAPN 169 (448)
T ss_pred CcCCCceeEEEEeeeCCCCCCeeeeeeccc
Confidence 999999999999999999999998765554
No 208
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=94.84 E-value=0.072 Score=34.21 Aligned_cols=35 Identities=26% Similarity=0.475 Sum_probs=19.8
Q ss_pred eEEE-EeCCEEEEEEeeC----------CCCeEEEEcCCCCChhhH
Q 025885 6 HTTV-ATNGINMHVASIG----------TGPAVLFIHGFPELWYSW 40 (247)
Q Consensus 6 ~~~~-~~~g~~~~~~~~g----------~~~~vvllHG~~~~~~~~ 40 (247)
.+.+ +-||.-+...+.. .+|+|+|.||+.+++..|
T Consensus 14 ~h~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~~w 59 (63)
T PF04083_consen 14 EHEVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSDDW 59 (63)
T ss_dssp EEEEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GGGG
T ss_pred EEEEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChHHH
Confidence 3444 4488877766431 268999999999999988
No 209
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=94.70 E-value=0.12 Score=46.55 Aligned_cols=104 Identities=17% Similarity=0.103 Sum_probs=65.3
Q ss_pred CCeEEEEcCCCCChhhHHHHHHH----HHH--------------CCCEEEEeC-CCCCCCCCCCCCCCCCCHHHHHHHHH
Q 025885 24 GPAVLFIHGFPELWYSWRNQLLY----LSS--------------RGYRAIAPD-LRGYGDTDAPPSVTSYTALHLVGDLI 84 (247)
Q Consensus 24 ~~~vvllHG~~~~~~~~~~~~~~----l~~--------------~g~~v~~~d-~~G~G~s~~~~~~~~~~~~~~~~~~~ 84 (247)
.|.++.+.|.||.+..|-.+.+. +.. ..-.++-+| .-|.|.|....+....+.....+|+.
T Consensus 101 rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~adLvFiDqPvGTGfS~a~~~e~~~d~~~~~~D~~ 180 (498)
T COG2939 101 RPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWLDFADLVFIDQPVGTGFSRALGDEKKKDFEGAGKDVY 180 (498)
T ss_pred CceEEEecCCCChHhhhhhhhhcCCeeeeCCCCCCCCCCccccccCCceEEEecCcccCcccccccccccchhccchhHH
Confidence 57899999999999888666421 000 013578888 55888886433223334444455555
Q ss_pred HHHHHh-------C--CceEEEEEechhHHHHHHHHHhCCC---ceeEEEEecCC
Q 025885 85 GLLDKL-------G--IHQVFLVGHDWGALIAWYFCLFRPD---RVKALVNMSVP 127 (247)
Q Consensus 85 ~~~~~l-------~--~~~~~lvGhS~Gg~~a~~~a~~~p~---~v~~lv~~~~~ 127 (247)
.+.+.. . ..+.+|+|-|+||.-+-.+|..--+ ..++++.+++.
T Consensus 181 ~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssv 235 (498)
T COG2939 181 SFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSV 235 (498)
T ss_pred HHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeee
Confidence 444432 2 2489999999999887777754333 35666665543
No 210
>PLN03037 lipase class 3 family protein; Provisional
Probab=94.55 E-value=0.054 Score=49.05 Aligned_cols=37 Identities=14% Similarity=0.202 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHHhC---C-ceEEEEEechhHHHHHHHHHh
Q 025885 77 LHLVGDLIGLLDKLG---I-HQVFLVGHDWGALIAWYFCLF 113 (247)
Q Consensus 77 ~~~~~~~~~~~~~l~---~-~~~~lvGhS~Gg~~a~~~a~~ 113 (247)
+++.+++..+++.+. . .++++.|||+||++|...|..
T Consensus 298 eQVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 298 EQVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHH
Confidence 345567777776653 2 369999999999999888754
No 211
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=94.51 E-value=0.077 Score=49.15 Aligned_cols=103 Identities=19% Similarity=0.268 Sum_probs=63.4
Q ss_pred CCCCeEEEEcCCCCChh--hHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCC--CCCCCHHHHHHHHHHHHHHh---C---
Q 025885 22 GTGPAVLFIHGFPELWY--SWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPS--VTSYTALHLVGDLIGLLDKL---G--- 91 (247)
Q Consensus 22 g~~~~vvllHG~~~~~~--~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~--~~~~~~~~~~~~~~~~~~~l---~--- 91 (247)
|++|++|..=|--+... .+....-.|.++|+--...-.||=|.-...-. .......+-..|..+..++| +
T Consensus 446 g~~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGGgelG~~WYe~GK~l~K~NTf~DFIa~a~~Lv~~g~~~ 525 (682)
T COG1770 446 GSAPLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGGGELGRAWYEDGKLLNKKNTFTDFIAAARHLVKEGYTS 525 (682)
T ss_pred CCCcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeecccccChHHHHhhhhhhccccHHHHHHHHHHHHHcCcCC
Confidence 34567776666544332 34444445667887665667787664332110 01112222334455555554 2
Q ss_pred CceEEEEEechhHHHHHHHHHhCCCceeEEEEe
Q 025885 92 IHQVFLVGHDWGALIAWYFCLFRPDRVKALVNM 124 (247)
Q Consensus 92 ~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~ 124 (247)
.+++++.|.|.||++.-..+...|+.++++|.-
T Consensus 526 ~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~ 558 (682)
T COG1770 526 PDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQ 558 (682)
T ss_pred ccceEEeccCchhHHHHHHHhhChhhhhheeec
Confidence 347999999999999999999999999998863
No 212
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=94.49 E-value=0.091 Score=42.15 Aligned_cols=69 Identities=12% Similarity=0.012 Sum_probs=41.6
Q ss_pred HHHHHCCCEEEEeCCCCCCCCCCC---CCCC----CCCHHHHHHHHHHHHHHhCC-ceEEEEEechhHHHHHHHHHhC
Q 025885 45 LYLSSRGYRAIAPDLRGYGDTDAP---PSVT----SYTALHLVGDLIGLLDKLGI-HQVFLVGHDWGALIAWYFCLFR 114 (247)
Q Consensus 45 ~~l~~~g~~v~~~d~~G~G~s~~~---~~~~----~~~~~~~~~~~~~~~~~l~~-~~~~lvGhS~Gg~~a~~~a~~~ 114 (247)
..+.. -.+|++|=+|-....... .... .....+..+.....+++.+. .+++|+|||.|+.+..++....
T Consensus 40 s~F~~-~~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 40 SAFNG-VCNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred hhhhc-CCccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 34444 378999977743321111 1000 11233444445556666654 4799999999999999998764
No 213
>PLN02802 triacylglycerol lipase
Probab=94.25 E-value=0.08 Score=47.85 Aligned_cols=36 Identities=25% Similarity=0.355 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHhCC--ceEEEEEechhHHHHHHHHHh
Q 025885 78 HLVGDLIGLLDKLGI--HQVFLVGHDWGALIAWYFCLF 113 (247)
Q Consensus 78 ~~~~~~~~~~~~l~~--~~~~lvGhS~Gg~~a~~~a~~ 113 (247)
++.+++..+++...- .+|++.|||+||.+|...|..
T Consensus 313 qVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~d 350 (509)
T PLN02802 313 SVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADE 350 (509)
T ss_pred HHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHH
Confidence 445566666665542 269999999999999988764
No 214
>PLN02753 triacylglycerol lipase
Probab=94.11 E-value=0.09 Score=47.72 Aligned_cols=37 Identities=16% Similarity=0.270 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHHhCC-----ceEEEEEechhHHHHHHHHHh
Q 025885 77 LHLVGDLIGLLDKLGI-----HQVFLVGHDWGALIAWYFCLF 113 (247)
Q Consensus 77 ~~~~~~~~~~~~~l~~-----~~~~lvGhS~Gg~~a~~~a~~ 113 (247)
+++.+.+..+++..+. .+|++.|||+||++|...|..
T Consensus 291 eQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~D 332 (531)
T PLN02753 291 EQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYD 332 (531)
T ss_pred HHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHH
Confidence 3445556666665532 379999999999999988753
No 215
>PLN02719 triacylglycerol lipase
Probab=93.79 E-value=0.11 Score=47.01 Aligned_cols=36 Identities=17% Similarity=0.318 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHhCC-----ceEEEEEechhHHHHHHHHHh
Q 025885 78 HLVGDLIGLLDKLGI-----HQVFLVGHDWGALIAWYFCLF 113 (247)
Q Consensus 78 ~~~~~~~~~~~~l~~-----~~~~lvGhS~Gg~~a~~~a~~ 113 (247)
++.+.+..+++.... .++++.|||+||++|...|..
T Consensus 278 QVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 278 QVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred HHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHH
Confidence 445556666665532 379999999999999988753
No 216
>PLN02761 lipase class 3 family protein
Probab=93.74 E-value=0.12 Score=47.01 Aligned_cols=36 Identities=19% Similarity=0.333 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHHhC-----C-ceEEEEEechhHHHHHHHHH
Q 025885 77 LHLVGDLIGLLDKLG-----I-HQVFLVGHDWGALIAWYFCL 112 (247)
Q Consensus 77 ~~~~~~~~~~~~~l~-----~-~~~~lvGhS~Gg~~a~~~a~ 112 (247)
+++.+.|..+++..+ . -+++++|||+||++|...|.
T Consensus 272 ~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 272 EQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAY 313 (527)
T ss_pred HHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHH
Confidence 345566666666552 1 26999999999999998875
No 217
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=93.61 E-value=0.15 Score=39.45 Aligned_cols=115 Identities=13% Similarity=0.127 Sum_probs=65.7
Q ss_pred EEEEEEeeCC-CCeEEEEcCCCCChhhHHHH--HHHHH---HCC-CEEEEeCCCCCCCCCCCCCC-C-CCCHHHHHHHHH
Q 025885 14 INMHVASIGT-GPAVLFIHGFPELWYSWRNQ--LLYLS---SRG-YRAIAPDLRGYGDTDAPPSV-T-SYTALHLVGDLI 84 (247)
Q Consensus 14 ~~~~~~~~g~-~~~vvllHG~~~~~~~~~~~--~~~l~---~~g-~~v~~~d~~G~G~s~~~~~~-~-~~~~~~~~~~~~ 84 (247)
..+.+...|. |.+||.+.--.+....+... +..|+ +.| .+.++++ |-...+.-... . .-......+--.
T Consensus 15 RdMel~ryGHaG~pVvvFpts~Grf~eyed~G~v~ala~fie~G~vQlft~~--gldsESf~a~h~~~adr~~rH~Ayer 92 (227)
T COG4947 15 RDMELNRYGHAGIPVVVFPTSGGRFNEYEDFGMVDALASFIEEGLVQLFTLS--GLDSESFLATHKNAADRAERHRAYER 92 (227)
T ss_pred chhhhhhccCCCCcEEEEecCCCcchhhhhcccHHHHHHHHhcCcEEEEEec--ccchHhHhhhcCCHHHHHHHHHHHHH
Confidence 3455566674 66777777666666665432 33333 334 2344443 33221111100 0 001111111122
Q ss_pred HHHHHhCCceEEEEEechhHHHHHHHHHhCCCceeEEEEecCCCCC
Q 025885 85 GLLDKLGIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFPP 130 (247)
Q Consensus 85 ~~~~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~~~ 130 (247)
-++++.-..+..+-|.||||..|..+..++|+.+.++|.+++.+..
T Consensus 93 Yv~eEalpgs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvYda 138 (227)
T COG4947 93 YVIEEALPGSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVYDA 138 (227)
T ss_pred HHHHhhcCCCccccccchhhhhhhhhheeChhHhhhheeecceeeH
Confidence 3344444456788999999999999999999999999999887654
No 218
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=93.42 E-value=0.068 Score=48.98 Aligned_cols=118 Identities=19% Similarity=0.234 Sum_probs=75.7
Q ss_pred eEEEEe-CCEEEEEEee--C----CCCeEEEEcCCCCCh--hhHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCC--CCCC
Q 025885 6 HTTVAT-NGINMHVASI--G----TGPAVLFIHGFPELW--YSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPS--VTSY 74 (247)
Q Consensus 6 ~~~~~~-~g~~~~~~~~--g----~~~~vvllHG~~~~~--~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~--~~~~ 74 (247)
+...+. ||.+++|... | +.|++|.-=|.-.-+ -.+...+....++|...+..++||=|+=...-. ...-
T Consensus 396 Q~~atSkDGT~IPYFiv~K~~~~d~~pTll~aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIRGGGEfGp~WH~Aa~k~ 475 (648)
T COG1505 396 QFFATSKDGTRIPYFIVRKGAKKDENPTLLYAYGGFNISLTPRFSGSRKLWLERGGVFVLANIRGGGEFGPEWHQAGMKE 475 (648)
T ss_pred EEEEEcCCCccccEEEEecCCcCCCCceEEEeccccccccCCccchhhHHHHhcCCeEEEEecccCCccCHHHHHHHhhh
Confidence 334433 8999988754 3 245555433332222 234445555567798889999999775432110 0122
Q ss_pred CHHHHHHHHHHHHHHh---CC---ceEEEEEechhHHHHHHHHHhCCCceeEEEE
Q 025885 75 TALHLVGDLIGLLDKL---GI---HQVFLVGHDWGALIAWYFCLFRPDRVKALVN 123 (247)
Q Consensus 75 ~~~~~~~~~~~~~~~l---~~---~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~ 123 (247)
+.....+|..++.+.| |+ +++.+-|-|-||.+.-....+.||.+.++|+
T Consensus 476 nrq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~ 530 (648)
T COG1505 476 NKQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVC 530 (648)
T ss_pred cchhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccChhhhCceee
Confidence 3345566777777666 33 4799999999999999999999998888775
No 219
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=92.93 E-value=0.081 Score=48.57 Aligned_cols=97 Identities=20% Similarity=0.194 Sum_probs=58.6
Q ss_pred CCeEEEEcCCC----CChh--hHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH--------H
Q 025885 24 GPAVLFIHGFP----ELWY--SWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLD--------K 89 (247)
Q Consensus 24 ~~~vvllHG~~----~~~~--~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~--------~ 89 (247)
.|.+++.||.+ .+.. .|...+....+. -.+..+|++.-- ...++.+-++.+..+.+ +
T Consensus 176 spl~i~aps~p~ap~tSd~~~~wqs~lsl~gev-vev~tfdl~n~i--------gG~nI~h~ae~~vSf~r~kvlei~ge 246 (784)
T KOG3253|consen 176 SPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEV-VEVPTFDLNNPI--------GGANIKHAAEYSVSFDRYKVLEITGE 246 (784)
T ss_pred CceEEeccCCCCCCccchHHHhHHHHHhhhcee-eeeccccccCCC--------CCcchHHHHHHHHHHhhhhhhhhhcc
Confidence 57889999988 1222 344444433322 445666765210 11234444444444444 2
Q ss_pred hCCceEEEEEechhHHHHHHHHHhCC-CceeEEEEecCCCC
Q 025885 90 LGIHQVFLVGHDWGALIAWYFCLFRP-DRVKALVNMSVPFP 129 (247)
Q Consensus 90 l~~~~~~lvGhS~Gg~~a~~~a~~~p-~~v~~lv~~~~~~~ 129 (247)
+...+++|+|.|||+.++........ ..|.++|+++-|..
T Consensus 247 fpha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigypl~ 287 (784)
T KOG3253|consen 247 FPHAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYPLD 287 (784)
T ss_pred CCCCceEEEecccCceeeEEeccccCCceEEEEEEeccccc
Confidence 34457999999999888887765543 34899999987754
No 220
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=92.65 E-value=0.21 Score=43.35 Aligned_cols=51 Identities=18% Similarity=0.206 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHHhCCceEEEEEechhHHHHHHHHHh----CC--CceeEEEEecCC
Q 025885 77 LHLVGDLIGLLDKLGIHQVFLVGHDWGALIAWYFCLF----RP--DRVKALVNMSVP 127 (247)
Q Consensus 77 ~~~~~~~~~~~~~l~~~~~~lvGhS~Gg~~a~~~a~~----~p--~~v~~lv~~~~~ 127 (247)
..+.+++..+++...--++.+.|||+||++|...|.. .. +.-.+++..+.|
T Consensus 155 ~~~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa~~i~~~~~~~~~~v~v~tFG~P 211 (336)
T KOG4569|consen 155 SGLDAELRRLIELYPNYSIWVTGHSLGGALASLAALDLVKNGLKTSSPVKVYTFGQP 211 (336)
T ss_pred HHHHHHHHHHHHhcCCcEEEEecCChHHHHHHHHHHHHHHcCCCCCCceEEEEecCC
Confidence 4666777888888776689999999999999888754 22 123455555544
No 221
>PLN02847 triacylglycerol lipase
Probab=92.10 E-value=0.29 Score=45.22 Aligned_cols=21 Identities=24% Similarity=0.369 Sum_probs=18.2
Q ss_pred ceEEEEEechhHHHHHHHHHh
Q 025885 93 HQVFLVGHDWGALIAWYFCLF 113 (247)
Q Consensus 93 ~~~~lvGhS~Gg~~a~~~a~~ 113 (247)
-+++++|||+||.+|..++..
T Consensus 251 YkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 251 FKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred CeEEEeccChHHHHHHHHHHH
Confidence 379999999999999888764
No 222
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=92.10 E-value=0.75 Score=42.39 Aligned_cols=38 Identities=29% Similarity=0.558 Sum_probs=28.7
Q ss_pred ceEEEEEechhHHHHHHHHHh-----CCC------ceeEEEEecCCCCC
Q 025885 93 HQVFLVGHDWGALIAWYFCLF-----RPD------RVKALVNMSVPFPP 130 (247)
Q Consensus 93 ~~~~lvGhS~Gg~~a~~~a~~-----~p~------~v~~lv~~~~~~~~ 130 (247)
.+++.+||||||.++-.+... .|+ ..+++|+++.|+..
T Consensus 526 RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~PHrG 574 (697)
T KOG2029|consen 526 RPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVPHRG 574 (697)
T ss_pred CceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecCCCC
Confidence 479999999999988766543 232 36789999998754
No 223
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=91.88 E-value=1.9 Score=35.18 Aligned_cols=100 Identities=12% Similarity=0.058 Sum_probs=61.3
Q ss_pred eEEEEcCCCCChh-hHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCc---eEEEEEec
Q 025885 26 AVLFIHGFPELWY-SWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIH---QVFLVGHD 101 (247)
Q Consensus 26 ~vvllHG~~~~~~-~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~lvGhS 101 (247)
|+|++=||.+... ...+..+...+.|+.++.+-.+-....... -.....++.+.+.+...... ++.+-..|
T Consensus 1 plvvl~gW~gA~~~hl~KY~~~Y~~~g~~il~~~~~~~~~~~~~-----~~~~~~~~~l~~~l~~~~~~~~~~il~H~FS 75 (240)
T PF05705_consen 1 PLVVLLGWMGAKPKHLAKYSDLYQDPGFDILLVTSPPADFFWPS-----KRLAPAADKLLELLSDSQSASPPPILFHSFS 75 (240)
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHhcCCeEEEEeCCHHHHeeec-----cchHHHHHHHHHHhhhhccCCCCCEEEEEEE
Confidence 5788889886654 344555666668999998765532211111 23444555565555554433 79999999
Q ss_pred hhHHHHHHHHHh-----C-----CCceeEEEEecCCCCC
Q 025885 102 WGALIAWYFCLF-----R-----PDRVKALVNMSVPFPP 130 (247)
Q Consensus 102 ~Gg~~a~~~a~~-----~-----p~~v~~lv~~~~~~~~ 130 (247)
.||......... . -.+++++|+-|+|...
T Consensus 76 nGG~~~~~~l~~~~~~~~~~~~~~~~i~g~I~DS~P~~~ 114 (240)
T PF05705_consen 76 NGGSFLYSQLLEAYQSRKKFGKLLPRIKGIIFDSCPGIP 114 (240)
T ss_pred CchHHHHHHHHHHHHhcccccccccccceeEEeCCCCcc
Confidence 988776555331 1 1248899988877543
No 224
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=91.22 E-value=0.98 Score=38.88 Aligned_cols=75 Identities=15% Similarity=0.123 Sum_probs=45.8
Q ss_pred EEEEeCCC-CCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-------CCceEEEEEechhHHHHHHHHHhC----------
Q 025885 53 RAIAPDLR-GYGDTDAPPSVTSYTALHLVGDLIGLLDKL-------GIHQVFLVGHDWGALIAWYFCLFR---------- 114 (247)
Q Consensus 53 ~v~~~d~~-G~G~s~~~~~~~~~~~~~~~~~~~~~~~~l-------~~~~~~lvGhS~Gg~~a~~~a~~~---------- 114 (247)
+++-+|.| |.|.|-........+-...++|+..++..+ ...+++|.|-|.||..+-.+|..-
T Consensus 3 NvLfiDqPvGvGfSy~~~~~~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~~ 82 (319)
T PLN02213 3 NIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEP 82 (319)
T ss_pred cEEEecCCCCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccccCC
Confidence 68889988 888885432211122223335665555542 235799999999998777776531
Q ss_pred CCceeEEEEecCC
Q 025885 115 PDRVKALVNMSVP 127 (247)
Q Consensus 115 p~~v~~lv~~~~~ 127 (247)
+=.++++++-++-
T Consensus 83 ~inLkGi~IGNg~ 95 (319)
T PLN02213 83 PINLQGYMLGNPV 95 (319)
T ss_pred ceeeeEEEeCCCC
Confidence 1146777765543
No 225
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=91.08 E-value=2.2 Score=34.85 Aligned_cols=79 Identities=18% Similarity=0.098 Sum_probs=44.4
Q ss_pred CCEEEEeCCCCC-CC-CCCCCCCCCCCHHHHHHHHHHHHHHh--CCceEEEEEechhHHHHHHHHHhCC-----C-ceeE
Q 025885 51 GYRAIAPDLRGY-GD-TDAPPSVTSYTALHLVGDLIGLLDKL--GIHQVFLVGHDWGALIAWYFCLFRP-----D-RVKA 120 (247)
Q Consensus 51 g~~v~~~d~~G~-G~-s~~~~~~~~~~~~~~~~~~~~~~~~l--~~~~~~lvGhS~Gg~~a~~~a~~~p-----~-~v~~ 120 (247)
|+.+..++.|.. +- +.........+..+=++.+.+.++.. .-++++++|+|+|+.++...+.+.- . ..-.
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~l~~~~~~~~~~l~ 81 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRRLAADGDPPPDDLS 81 (225)
T ss_pred CcceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHHHHhcCCCCcCceE
Confidence 566777777651 10 00000002234444455566555552 2357999999999999988765531 1 2345
Q ss_pred EEEecCCCC
Q 025885 121 LVNMSVPFP 129 (247)
Q Consensus 121 lv~~~~~~~ 129 (247)
+|+++-|..
T Consensus 82 fVl~gnP~r 90 (225)
T PF08237_consen 82 FVLIGNPRR 90 (225)
T ss_pred EEEecCCCC
Confidence 677765543
No 226
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=90.70 E-value=1.3 Score=44.31 Aligned_cols=94 Identities=17% Similarity=0.200 Sum_probs=63.7
Q ss_pred CCCeEEEEcCCCCChhhHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC-ceEEEEEec
Q 025885 23 TGPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGI-HQVFLVGHD 101 (247)
Q Consensus 23 ~~~~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~lvGhS 101 (247)
++|+++|+|-.-+.......++..| ..|-||.-.... ....+++..++-...-++.+.. .+..++|.|
T Consensus 2122 e~~~~Ffv~pIEG~tt~l~~la~rl----------e~PaYglQ~T~~-vP~dSies~A~~yirqirkvQP~GPYrl~GYS 2190 (2376)
T KOG1202|consen 2122 EEPPLFFVHPIEGFTTALESLASRL----------EIPAYGLQCTEA-VPLDSIESLAAYYIRQIRKVQPEGPYRLAGYS 2190 (2376)
T ss_pred cCCceEEEeccccchHHHHHHHhhc----------CCcchhhhcccc-CCcchHHHHHHHHHHHHHhcCCCCCeeeeccc
Confidence 4799999998887766665555443 234455322111 1234678888777777777765 489999999
Q ss_pred hhHHHHHHHHHhCC--CceeEEEEecCC
Q 025885 102 WGALIAWYFCLFRP--DRVKALVNMSVP 127 (247)
Q Consensus 102 ~Gg~~a~~~a~~~p--~~v~~lv~~~~~ 127 (247)
+|+.++..+|.... +....+|++++.
T Consensus 2191 yG~~l~f~ma~~Lqe~~~~~~lillDGs 2218 (2376)
T KOG1202|consen 2191 YGACLAFEMASQLQEQQSPAPLILLDGS 2218 (2376)
T ss_pred hhHHHHHHHHHHHHhhcCCCcEEEecCc
Confidence 99999999986532 234568888764
No 227
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=90.40 E-value=1.6 Score=39.48 Aligned_cols=93 Identities=22% Similarity=0.235 Sum_probs=61.9
Q ss_pred EEEEeeCC-C-CeEEEEcCCCCChhhH--HHHHHHHHHCCCEEEEe-CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh
Q 025885 16 MHVASIGT-G-PAVLFIHGFPELWYSW--RNQLLYLSSRGYRAIAP-DLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKL 90 (247)
Q Consensus 16 ~~~~~~g~-~-~~vvllHG~~~~~~~~--~~~~~~l~~~g~~v~~~-d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~l 90 (247)
++|..+|+ + |..|.+-|+-. ++-+ -.+++.| |...+.+ |.|=-|.+---.. ..| -..+.+-|.+.++.|
T Consensus 279 ~yYFnPGD~KPPL~VYFSGyR~-aEGFEgy~MMk~L---g~PfLL~~DpRleGGaFYlGs-~ey-E~~I~~~I~~~L~~L 352 (511)
T TIGR03712 279 IYYFNPGDFKPPLNVYFSGYRP-AEGFEGYFMMKRL---GAPFLLIGDPRLEGGAFYLGS-DEY-EQGIINVIQEKLDYL 352 (511)
T ss_pred EEecCCcCCCCCeEEeeccCcc-cCcchhHHHHHhc---CCCeEEeeccccccceeeeCc-HHH-HHHHHHHHHHHHHHh
Confidence 45667775 4 56789999855 3333 2344444 5554444 8887776533221 122 345666778888999
Q ss_pred CCc--eEEEEEechhHHHHHHHHHhC
Q 025885 91 GIH--QVFLVGHDWGALIAWYFCLFR 114 (247)
Q Consensus 91 ~~~--~~~lvGhS~Gg~~a~~~a~~~ 114 (247)
|.+ +++|-|-|||..-|+.+++..
T Consensus 353 gF~~~qLILSGlSMGTfgAlYYga~l 378 (511)
T TIGR03712 353 GFDHDQLILSGLSMGTFGALYYGAKL 378 (511)
T ss_pred CCCHHHeeeccccccchhhhhhcccC
Confidence 876 699999999999999998875
No 228
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=89.22 E-value=2.1 Score=39.00 Aligned_cols=81 Identities=15% Similarity=0.165 Sum_probs=52.5
Q ss_pred HHHHHHCCCEEEEeCCCCCCCCCC--CCCCCCCCHHHH-----------HHHHHHHHHHh---CCceEEEEEechhHHHH
Q 025885 44 LLYLSSRGYRAIAPDLRGYGDTDA--PPSVTSYTALHL-----------VGDLIGLLDKL---GIHQVFLVGHDWGALIA 107 (247)
Q Consensus 44 ~~~l~~~g~~v~~~d~~G~G~s~~--~~~~~~~~~~~~-----------~~~~~~~~~~l---~~~~~~lvGhS~Gg~~a 107 (247)
...+ .+||.++.=|. ||..+.. ... ...+.+.+ +.--.++++.+ ..+.-+..|.|-||.-+
T Consensus 53 ~~~~-~~G~A~~~TD~-Gh~~~~~~~~~~-~~~n~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqg 129 (474)
T PF07519_consen 53 ATAL-ARGYATASTDS-GHQGSAGSDDAS-FGNNPEALLDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQG 129 (474)
T ss_pred chhh-hcCeEEEEecC-CCCCCccccccc-ccCCHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchH
Confidence 3444 46999999996 7755432 111 11222111 11112334333 34568999999999999
Q ss_pred HHHHHhCCCceeEEEEecCC
Q 025885 108 WYFCLFRPDRVKALVNMSVP 127 (247)
Q Consensus 108 ~~~a~~~p~~v~~lv~~~~~ 127 (247)
+..|.++|+.+++++.-++.
T Consensus 130 l~~AQryP~dfDGIlAgaPA 149 (474)
T PF07519_consen 130 LMAAQRYPEDFDGILAGAPA 149 (474)
T ss_pred HHHHHhChhhcCeEEeCCch
Confidence 99999999999999986654
No 229
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=89.05 E-value=6.2 Score=27.79 Aligned_cols=86 Identities=20% Similarity=0.178 Sum_probs=54.8
Q ss_pred hhhHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEechhH--HHHHHHHHhC
Q 025885 37 WYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVFLVGHDWGA--LIAWYFCLFR 114 (247)
Q Consensus 37 ~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~lvGhS~Gg--~~a~~~a~~~ 114 (247)
+..+..+.+.+...|+-.-.+.++.+|.+....- .....+.=...+..+++.+...+++|||-|=-. -+-..+|.++
T Consensus 10 wnly~~l~~Fl~~~~~P~G~~~Lr~~~~~~~~~~-~~~~~~~K~~~i~~i~~~fP~~kfiLIGDsgq~DpeiY~~ia~~~ 88 (100)
T PF09949_consen 10 WNLYPFLRDFLRRNGFPAGPLLLRDYGPSLSGLF-KSGAEEHKRDNIERILRDFPERKFILIGDSGQHDPEIYAEIARRF 88 (100)
T ss_pred HHHHHHHHHHHHhcCCCCCceEcccCCccccccc-cCCchhHHHHHHHHHHHHCCCCcEEEEeeCCCcCHHHHHHHHHHC
Confidence 3445566667767777666666776654422110 011112234457788888888899999977544 3455678899
Q ss_pred CCceeEEEE
Q 025885 115 PDRVKALVN 123 (247)
Q Consensus 115 p~~v~~lv~ 123 (247)
|++|.++.+
T Consensus 89 P~~i~ai~I 97 (100)
T PF09949_consen 89 PGRILAIYI 97 (100)
T ss_pred CCCEEEEEE
Confidence 999998864
No 230
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=83.88 E-value=3.7 Score=35.26 Aligned_cols=88 Identities=19% Similarity=0.242 Sum_probs=59.1
Q ss_pred CCeEEEEcCCCCChhh----HHHHHH-----------HHHHCCCEEEEeCCC-CCCCCCCCCC-CCCCCHHHHHHHHHHH
Q 025885 24 GPAVLFIHGFPELWYS----WRNQLL-----------YLSSRGYRAIAPDLR-GYGDTDAPPS-VTSYTALHLVGDLIGL 86 (247)
Q Consensus 24 ~~~vvllHG~~~~~~~----~~~~~~-----------~l~~~g~~v~~~d~~-G~G~s~~~~~-~~~~~~~~~~~~~~~~ 86 (247)
.|..+.+.|.|+.+.. |..+-+ .|.. ..++-+|-| |-|.|-.... ....+..+++.|+.++
T Consensus 31 ~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWlk~--adllfvDnPVGaGfSyVdg~~~Y~~~~~qia~Dl~~l 108 (414)
T KOG1283|consen 31 RPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWLKD--ADLLFVDNPVGAGFSYVDGSSAYTTNNKQIALDLVEL 108 (414)
T ss_pred CCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhhhh--ccEEEecCCCcCceeeecCcccccccHHHHHHHHHHH
Confidence 5778899999886543 333221 2222 356667655 7777743321 1234667889999999
Q ss_pred HHHh-------CCceEEEEEechhHHHHHHHHHh
Q 025885 87 LDKL-------GIHQVFLVGHDWGALIAWYFCLF 113 (247)
Q Consensus 87 ~~~l-------~~~~~~lvGhS~Gg~~a~~~a~~ 113 (247)
++.+ ...+++++.-|.||-+|..++..
T Consensus 109 lk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~ 142 (414)
T KOG1283|consen 109 LKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALE 142 (414)
T ss_pred HHHHHhcCccccccceEEEEhhcccchhhhhhhh
Confidence 9876 23479999999999999887754
No 231
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=82.40 E-value=1.5 Score=36.51 Aligned_cols=97 Identities=19% Similarity=0.145 Sum_probs=58.2
Q ss_pred EEEEcCCCCChhhHH-HHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHH--------HHHH------HhC
Q 025885 27 VLFIHGFPELWYSWR-NQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLI--------GLLD------KLG 91 (247)
Q Consensus 27 vvllHG~~~~~~~~~-~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~--------~~~~------~l~ 91 (247)
-|.+-|-+++.+.=+ .+...+.+++...+...-|-||....+.. .. +.-+.+.|+. +... ..|
T Consensus 116 OG~~a~tgdh~y~rr~~L~~p~~k~~i~tmvle~pfYgqr~p~~q-~~-~~Le~vtDlf~mG~A~I~E~~~lf~Ws~~~g 193 (371)
T KOG1551|consen 116 CLSWALTGDHVYTRRLVLSKPINKREIATMVLEKPFYGQRVPEEQ-II-HMLEYVTDLFKMGRATIQEFVKLFTWSSADG 193 (371)
T ss_pred eEEEeecCCceeEeeeeecCchhhhcchheeeecccccccCCHHH-HH-HHHHHHHHHHHhhHHHHHHHHHhcccccccC
Confidence 344444444433323 24556667788888888898987654321 11 1111122221 1111 126
Q ss_pred CceEEEEEechhHHHHHHHHHhCCCceeEEEEec
Q 025885 92 IHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMS 125 (247)
Q Consensus 92 ~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~ 125 (247)
..+..++|-||||.+|......++..|..+=+++
T Consensus 194 ~g~~~~~g~Smgg~~a~~vgS~~q~Pva~~p~l~ 227 (371)
T KOG1551|consen 194 LGNLNLVGRSMGGDIANQVGSLHQKPVATAPCLN 227 (371)
T ss_pred cccceeeeeecccHHHHhhcccCCCCcccccccc
Confidence 6789999999999999999998887666665554
No 232
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=81.76 E-value=3.5 Score=34.84 Aligned_cols=26 Identities=23% Similarity=0.286 Sum_probs=21.8
Q ss_pred hCCceEEEEEechhHHHHHHHHHhCC
Q 025885 90 LGIHQVFLVGHDWGALIAWYFCLFRP 115 (247)
Q Consensus 90 l~~~~~~lvGhS~Gg~~a~~~a~~~p 115 (247)
..-.++.|.|||+||.+|..+..++.
T Consensus 273 Ypda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T KOG4540|consen 273 YPDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred CCCceEEEeccccchHHHHHhccccC
Confidence 34458999999999999999987764
No 233
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=81.76 E-value=3.5 Score=34.84 Aligned_cols=26 Identities=23% Similarity=0.286 Sum_probs=21.8
Q ss_pred hCCceEEEEEechhHHHHHHHHHhCC
Q 025885 90 LGIHQVFLVGHDWGALIAWYFCLFRP 115 (247)
Q Consensus 90 l~~~~~~lvGhS~Gg~~a~~~a~~~p 115 (247)
..-.++.|.|||+||.+|..+..++.
T Consensus 273 Ypda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T COG5153 273 YPDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred CCCceEEEeccccchHHHHHhccccC
Confidence 34458999999999999999987764
No 234
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=80.68 E-value=2.6 Score=38.39 Aligned_cols=41 Identities=24% Similarity=0.367 Sum_probs=32.2
Q ss_pred hCCceEEEEEechhHHHHHHHHHh-----CCCceeEEEEecCCCCC
Q 025885 90 LGIHQVFLVGHDWGALIAWYFCLF-----RPDRVKALVNMSVPFPP 130 (247)
Q Consensus 90 l~~~~~~lvGhS~Gg~~a~~~a~~-----~p~~v~~lv~~~~~~~~ 130 (247)
+|..+|+|||+|.|+.+...+... .-+.|+.+++++.|.+.
T Consensus 444 qG~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~~ 489 (633)
T KOG2385|consen 444 QGNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVPT 489 (633)
T ss_pred cCCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCccC
Confidence 477899999999999998866542 22468999999988654
No 235
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=73.23 E-value=23 Score=28.27 Aligned_cols=51 Identities=12% Similarity=0.188 Sum_probs=38.0
Q ss_pred CCCHHHHHHHHHHHHHHhCCceEEEEEech----hHHHHHHHHHhCC-CceeEEEEe
Q 025885 73 SYTALHLVGDLIGLLDKLGIHQVFLVGHDW----GALIAWYFCLFRP-DRVKALVNM 124 (247)
Q Consensus 73 ~~~~~~~~~~~~~~~~~l~~~~~~lvGhS~----Gg~~a~~~a~~~p-~~v~~lv~~ 124 (247)
.|+.+.+++.+.++++..+ ..++|+|+|. |..++-++|++.. ..+..++-+
T Consensus 90 ~~~~e~~a~al~~~i~~~~-p~lVL~~~t~~~~~grdlaprlAarLga~lvsdv~~l 145 (202)
T cd01714 90 GADTLATAKALAAAIKKIG-VDLILTGKQSIDGDTGQVGPLLAELLGWPQITYVSKI 145 (202)
T ss_pred CCChHHHHHHHHHHHHHhC-CCEEEEcCCcccCCcCcHHHHHHHHhCCCccceEEEE
Confidence 5667888888988888877 5799999998 8888888887743 234444443
No 236
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=72.22 E-value=11 Score=35.07 Aligned_cols=97 Identities=21% Similarity=0.156 Sum_probs=50.9
Q ss_pred eEEEEcCCC---CChhhHHHHHH-HHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHH---HHHHHHHHhCC--ceEE
Q 025885 26 AVLFIHGFP---ELWYSWRNQLL-YLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVG---DLIGLLDKLGI--HQVF 96 (247)
Q Consensus 26 ~vvllHG~~---~~~~~~~~~~~-~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~---~~~~~~~~l~~--~~~~ 96 (247)
.|+-+||.+ .++.+-....+ ...+.|+.|+.+|+- -.|..+.+-..++..- .+..-...+|. ++|+
T Consensus 398 li~HcHGGGfVAqsSkSHE~YLr~Wa~aL~cPiiSVdYS-----LAPEaPFPRaleEv~fAYcW~inn~allG~TgEriv 472 (880)
T KOG4388|consen 398 LIVHCHGGGFVAQSSKSHEPYLRSWAQALGCPIISVDYS-----LAPEAPFPRALEEVFFAYCWAINNCALLGSTGERIV 472 (880)
T ss_pred EEEEecCCceeeeccccccHHHHHHHHHhCCCeEEeeec-----cCCCCCCCcHHHHHHHHHHHHhcCHHHhCcccceEE
Confidence 466788875 23333222222 222348999999973 2333222222332221 12222333453 5999
Q ss_pred EEEechhHHHHHHHHHh---CCCce-eEEEEecCC
Q 025885 97 LVGHDWGALIAWYFCLF---RPDRV-KALVNMSVP 127 (247)
Q Consensus 97 lvGhS~Gg~~a~~~a~~---~p~~v-~~lv~~~~~ 127 (247)
++|-|.||.+++..|.+ +.-|+ +++++.-+|
T Consensus 473 ~aGDSAGgNL~~~VaLr~i~~gvRvPDGl~laY~p 507 (880)
T KOG4388|consen 473 LAGDSAGGNLCFTVALRAIAYGVRVPDGLMLAYPP 507 (880)
T ss_pred EeccCCCcceeehhHHHHHHhCCCCCCceEEecCh
Confidence 99999999876555433 22233 677765444
No 237
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=71.25 E-value=6.5 Score=28.98 Aligned_cols=29 Identities=28% Similarity=0.295 Sum_probs=21.4
Q ss_pred CCCeEEEEcCCCCChhhH--HHHHHHHHHCC
Q 025885 23 TGPAVLFIHGFPELWYSW--RNQLLYLSSRG 51 (247)
Q Consensus 23 ~~~~vvllHG~~~~~~~~--~~~~~~l~~~g 51 (247)
++|.|+-+||++|.+.++ +-+++.|-..|
T Consensus 51 ~KpLVlSfHG~tGtGKn~v~~liA~~ly~~G 81 (127)
T PF06309_consen 51 RKPLVLSFHGWTGTGKNFVSRLIAEHLYKSG 81 (127)
T ss_pred CCCEEEEeecCCCCcHHHHHHHHHHHHHhcc
Confidence 468888999999999887 33455655554
No 238
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=69.28 E-value=3.9 Score=35.00 Aligned_cols=29 Identities=31% Similarity=0.426 Sum_probs=23.5
Q ss_pred HHHHHHHhCCceEEEEEechhHHHHHHHH
Q 025885 83 LIGLLDKLGIHQVFLVGHDWGALIAWYFC 111 (247)
Q Consensus 83 ~~~~~~~l~~~~~~lvGhS~Gg~~a~~~a 111 (247)
+.++++..|+++-.++|||+|=..|+.++
T Consensus 74 l~~~l~~~Gi~P~~v~GhSlGE~aA~~aa 102 (318)
T PF00698_consen 74 LARLLRSWGIKPDAVIGHSLGEYAALVAA 102 (318)
T ss_dssp HHHHHHHTTHCESEEEESTTHHHHHHHHT
T ss_pred hhhhhcccccccceeeccchhhHHHHHHC
Confidence 44566777889999999999998887554
No 239
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=67.20 E-value=7 Score=32.87 Aligned_cols=30 Identities=30% Similarity=0.429 Sum_probs=23.9
Q ss_pred HHHHHHHhCCceEEEEEechhHHHHHHHHH
Q 025885 83 LIGLLDKLGIHQVFLVGHDWGALIAWYFCL 112 (247)
Q Consensus 83 ~~~~~~~l~~~~~~lvGhS~Gg~~a~~~a~ 112 (247)
+.++++.+|+++-.++|||+|-..|..++.
T Consensus 72 ~~~~l~~~Gi~p~~~~GhSlGE~aA~~~ag 101 (298)
T smart00827 72 LARLWRSWGVRPDAVVGHSLGEIAAAYVAG 101 (298)
T ss_pred HHHHHHHcCCcccEEEecCHHHHHHHHHhC
Confidence 345567778999999999999998877653
No 240
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=64.59 E-value=54 Score=27.52 Aligned_cols=30 Identities=23% Similarity=0.257 Sum_probs=22.7
Q ss_pred HHHHHhC-CceEEEEEechhHHHHHHHHHhC
Q 025885 85 GLLDKLG-IHQVFLVGHDWGALIAWYFCLFR 114 (247)
Q Consensus 85 ~~~~~l~-~~~~~lvGhS~Gg~~a~~~a~~~ 114 (247)
.+++... .+++.++|.|-|+..|..+|..-
T Consensus 83 ~l~~~~~~gd~I~lfGFSRGA~~AR~~a~~i 113 (277)
T PF09994_consen 83 FLSKNYEPGDRIYLFGFSRGAYTARAFANMI 113 (277)
T ss_pred HHHhccCCcceEEEEecCccHHHHHHHHHHH
Confidence 3334443 35799999999999999999653
No 241
>PRK12467 peptide synthase; Provisional
Probab=64.55 E-value=60 Score=37.94 Aligned_cols=96 Identities=11% Similarity=0.039 Sum_probs=66.0
Q ss_pred CeEEEEcCCCCChhhHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC-CceEEEEEechh
Q 025885 25 PAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLG-IHQVFLVGHDWG 103 (247)
Q Consensus 25 ~~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~lvGhS~G 103 (247)
+.+++.|...++...+..+...+.. +..++.+..++.-.... ...++..++....+.+.... ..+..+.|+|+|
T Consensus 3693 ~~l~~~h~~~r~~~~~~~l~~~l~~-~~~~~~l~~~~~~~d~~----~~~~~~~~~~~y~~~~~~~~~~~p~~l~g~s~g 3767 (3956)
T PRK12467 3693 PALFCRHEGLGTVFDYEPLAVILEG-DRHVLGLTCRHLLDDGW----QDTSLQAMAVQYADYILWQQAKGPYGLLGWSLG 3767 (3956)
T ss_pred cceeeechhhcchhhhHHHHHHhCC-CCcEEEEeccccccccC----CccchHHHHHHHHHHHHHhccCCCeeeeeeecc
Confidence 5599999998888877777777754 46788877766532211 12345666666666666654 347899999999
Q ss_pred HHHHHHHHHh---CCCceeEEEEec
Q 025885 104 ALIAWYFCLF---RPDRVKALVNMS 125 (247)
Q Consensus 104 g~~a~~~a~~---~p~~v~~lv~~~ 125 (247)
|.++..++.. ..+.+.-+.++.
T Consensus 3768 ~~~a~~~~~~l~~~g~~~~~~~~~~ 3792 (3956)
T PRK12467 3768 GTLARLVAELLEREGESEAFLGLFD 3792 (3956)
T ss_pred hHHHHHHHHHHHHcCCceeEEEEEe
Confidence 9999888764 445566665554
No 242
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=63.50 E-value=9.2 Score=32.25 Aligned_cols=30 Identities=17% Similarity=-0.082 Sum_probs=23.8
Q ss_pred HHHHHHHhCCceEEEEEechhHHHHHHHHH
Q 025885 83 LIGLLDKLGIHQVFLVGHDWGALIAWYFCL 112 (247)
Q Consensus 83 ~~~~~~~l~~~~~~lvGhS~Gg~~a~~~a~ 112 (247)
+.++++..|.++..++|||+|-..|..++.
T Consensus 66 l~~~l~~~g~~P~~v~GhS~GE~aAa~~aG 95 (295)
T TIGR03131 66 AWRALLALLPRPSAVAGYSVGEYAAAVVAG 95 (295)
T ss_pred HHHHHHhcCCCCcEEeecCHHHHHHHHHhC
Confidence 445566778889999999999988877653
No 243
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=63.17 E-value=33 Score=26.62 Aligned_cols=79 Identities=10% Similarity=0.058 Sum_probs=51.4
Q ss_pred CeEEEEcCCCCChhhHHHHHHHHHHCCCE-EEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEechh
Q 025885 25 PAVLFIHGFPELWYSWRNQLLYLSSRGYR-AIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVFLVGHDWG 103 (247)
Q Consensus 25 ~~vvllHG~~~~~~~~~~~~~~l~~~g~~-v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~lvGhS~G 103 (247)
..||.+-||+.......+++- ...+. ++++|..-... .++.. ..+.+.||.+|||
T Consensus 12 ~LIvyFaGwgtpps~v~HLil---peN~dl~lcYDY~dl~l--------dfDfs-------------Ay~hirlvAwSMG 67 (214)
T COG2830 12 HLIVYFAGWGTPPSAVNHLIL---PENHDLLLCYDYQDLNL--------DFDFS-------------AYRHIRLVAWSMG 67 (214)
T ss_pred EEEEEEecCCCCHHHHhhccC---CCCCcEEEEeehhhcCc--------ccchh-------------hhhhhhhhhhhHH
Confidence 478888899887776666542 23455 55778763321 11221 1245779999999
Q ss_pred HHHHHHHHHhCCCceeEEEEecCCCC
Q 025885 104 ALIAWYFCLFRPDRVKALVNMSVPFP 129 (247)
Q Consensus 104 g~~a~~~a~~~p~~v~~lv~~~~~~~ 129 (247)
-.+|-++....+ ++..+.+++...
T Consensus 68 VwvAeR~lqg~~--lksatAiNGTgL 91 (214)
T COG2830 68 VWVAERVLQGIR--LKSATAINGTGL 91 (214)
T ss_pred HHHHHHHHhhcc--ccceeeecCCCC
Confidence 999999987765 677766665543
No 244
>PF03610 EIIA-man: PTS system fructose IIA component; InterPro: IPR004701 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) [, ] is a major carbohydrate transport system in bacteria. The PTS catalyses the phosphorylation of incoming sugar substrates and coupled with translocation across the cell membrane, makes the PTS a link between the uptake and metabolism of sugars. The general mechanism of the PTS is the following: a phosphoryl group from phosphoenolpyruvate (PEP) is transferred via a signal transduction pathway, to enzyme I (EI) which in turn transfers it to a phosphoryl carrier, the histidine protein (HPr). Phospho-HPr then transfers the phosphoryl group to a sugar-specific permease, a membrane-bound complex known as enzyme 2 (EII), which transports the sugar to the cell. EII consists of at least three structurally distinct domains IIA, IIB and IIC []. These can either be fused together in a single polypeptide chain or exist as two or three interactive chains, formerly called enzymes II (EII) and III (EIII). The first domain (IIA or EIIA) carries the first permease-specific phosphorylation site, a histidine which is phosphorylated by phospho-HPr. The second domain (IIB or EIIB) is phosphorylated by phospho-IIA on a cysteinyl or histidyl residue, depending on the sugar transported. Finally, the phosphoryl group is transferred from the IIB domain to the sugar substrate concomitantly with the sugar uptake processed by the IIC domain. This third domain (IIC or EIIC) forms the translocation channel and the specific substrate-binding site. An additional transmembrane domain IID, homologous to IIC, can be found in some PTSs, e.g. for mannose [, , , ]. The Man family is unique in several respects among PTS permease families. It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of Escherichia coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This family is specific for IIA and IIB components.; GO: 0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system, 0016021 integral to membrane; PDB: 3GDW_B 2JZN_A 1VSQ_A 2JZO_B 1VRC_A 1PDO_A 3GX1_A 3B48_B 3BED_B 3IPR_C ....
Probab=62.06 E-value=55 Score=23.28 Aligned_cols=71 Identities=15% Similarity=0.106 Sum_probs=46.4
Q ss_pred eEEEEcCCCCChhhHHHHHHHHHHC-CCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCc-eEEEEEechh
Q 025885 26 AVLFIHGFPELWYSWRNQLLYLSSR-GYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIH-QVFLVGHDWG 103 (247)
Q Consensus 26 ~vvllHG~~~~~~~~~~~~~~l~~~-g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~lvGhS~G 103 (247)
.||.-|| ..+......++.+... -..+.++++. ...+.+++.+.+.+.++..... .+.++ -|++
T Consensus 2 iii~sHG--~~A~g~~~~~~~i~G~~~~~i~~~~~~-----------~~~~~~~~~~~l~~~i~~~~~~~~vlil-~Dl~ 67 (116)
T PF03610_consen 2 IIIASHG--SLAEGLLESAEMILGEDQDNIEAVDLY-----------PDESIEDFEEKLEEAIEELDEGDGVLIL-TDLG 67 (116)
T ss_dssp EEEEEET--THHHHHHHHHHHHHTSTCSSEEEEEET-----------TTSCHHHHHHHHHHHHHHCCTTSEEEEE-ESST
T ss_pred EEEEECc--HHHHHHHHHHHHHcCCCcccEEEEECc-----------CCCCHHHHHHHHHHHHHhccCCCcEEEE-eeCC
Confidence 4788899 5666777777777765 3467777653 1335778888899999888644 45444 4555
Q ss_pred HHHHHHH
Q 025885 104 ALIAWYF 110 (247)
Q Consensus 104 g~~a~~~ 110 (247)
|......
T Consensus 68 ggsp~n~ 74 (116)
T PF03610_consen 68 GGSPFNE 74 (116)
T ss_dssp TSHHHHH
T ss_pred CCccchH
Confidence 5443333
No 245
>TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB. This model describes the YbaN protein family, also called PdaB and SpoVIE, of Gram-positive bacteria. Although ybaN null mutants have only a mild sporulation defect, ybaN/ytrI double mutants show drastically reducted sporulation efficiencies. This synthetic defect suggests the role of this sigmaE-controlled gene in sporulation had been masked by functional redundancy. Members of this family are homologous to a characterized polysaccharide deacetylase; the exact function this protein family is unknown.
Probab=62.02 E-value=7.6 Score=30.47 Aligned_cols=33 Identities=12% Similarity=0.279 Sum_probs=24.5
Q ss_pred eEEEEcC---CCCChhhHHHHHHHHHHCCCEEEEeC
Q 025885 26 AVLFIHG---FPELWYSWRNQLLYLSSRGYRAIAPD 58 (247)
Q Consensus 26 ~vvllHG---~~~~~~~~~~~~~~l~~~g~~v~~~d 58 (247)
.||++|. ...+......+++.|.++||+++.++
T Consensus 153 ~Iil~Hd~~~~~~t~~~l~~~i~~l~~~Gy~~vtl~ 188 (191)
T TIGR02764 153 DIILLHASDSAKQTVKALPTIIKKLKEKGYEFVTIS 188 (191)
T ss_pred CEEEEeCCCCcHhHHHHHHHHHHHHHHCCCEEEEHH
Confidence 5899993 33445566778889999999988763
No 246
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=61.90 E-value=1e+02 Score=26.44 Aligned_cols=102 Identities=14% Similarity=0.104 Sum_probs=69.2
Q ss_pred CeEEEEcCCCCChh-hHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEechh
Q 025885 25 PAVLFIHGFPELWY-SWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVFLVGHDWG 103 (247)
Q Consensus 25 ~~vvllHG~~~~~~-~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~lvGhS~G 103 (247)
|.||++--..++.. -.+.-++.|.. ...|+.-|+----. .|.....++.++.++-+.+.+..+|.+ +++++-+.=
T Consensus 104 PkvLivapmsGH~aTLLR~TV~alLp-~~~vyitDW~dAr~--Vp~~~G~FdldDYIdyvie~~~~~Gp~-~hv~aVCQP 179 (415)
T COG4553 104 PKVLIVAPMSGHYATLLRGTVEALLP-YHDVYITDWVDARM--VPLEAGHFDLDDYIDYVIEMINFLGPD-AHVMAVCQP 179 (415)
T ss_pred CeEEEEecccccHHHHHHHHHHHhcc-ccceeEeeccccce--eecccCCccHHHHHHHHHHHHHHhCCC-CcEEEEecC
Confidence 56777776666544 34666777765 36788888854322 233335678899999999999999976 666666665
Q ss_pred HH-----HHHHHHHhCCCceeEEEEecCCCCC
Q 025885 104 AL-----IAWYFCLFRPDRVKALVNMSVPFPP 130 (247)
Q Consensus 104 g~-----~a~~~a~~~p~~v~~lv~~~~~~~~ 130 (247)
+. +++..+...|..-...+++++|...
T Consensus 180 ~vPvLAAisLM~~~~~p~~PssMtlmGgPIDa 211 (415)
T COG4553 180 TVPVLAAISLMEEDGDPNVPSSMTLMGGPIDA 211 (415)
T ss_pred CchHHHHHHHHHhcCCCCCCceeeeecCcccc
Confidence 43 4444445567777899999988764
No 247
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=60.69 E-value=10 Score=31.69 Aligned_cols=29 Identities=24% Similarity=0.247 Sum_probs=22.5
Q ss_pred HHHHHHhC-CceEEEEEechhHHHHHHHHH
Q 025885 84 IGLLDKLG-IHQVFLVGHDWGALIAWYFCL 112 (247)
Q Consensus 84 ~~~~~~l~-~~~~~lvGhS~Gg~~a~~~a~ 112 (247)
...++..+ +++..++|||+|=..|..++.
T Consensus 73 ~~~l~~~g~i~p~~v~GhS~GE~aAa~~aG 102 (290)
T TIGR00128 73 YLKLKEQGGLKPDFAAGHSLGEYSALVAAG 102 (290)
T ss_pred HHHHHHcCCCCCCEEeecCHHHHHHHHHhC
Confidence 34455566 889999999999988877663
No 248
>cd00006 PTS_IIA_man PTS_IIA, PTS system, mannose/sorbose specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIA PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation. IIA subunits receive phosphoryl groups from HPr and transfer them to IIB subunits, which in turn phosphorylate the substrate.
Probab=56.19 E-value=73 Score=22.90 Aligned_cols=70 Identities=16% Similarity=0.122 Sum_probs=43.9
Q ss_pred eEEEEcCCCCChhhHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCc-eEEEEEech-h
Q 025885 26 AVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIH-QVFLVGHDW-G 103 (247)
Q Consensus 26 ~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~lvGhS~-G 103 (247)
.||.-|| .-+......++.+....-.+.++++. ...+..++.+.+.+.++..... .+.++ -|+ |
T Consensus 3 ili~sHG--~~A~gi~~~~~~i~G~~~~i~~~~~~-----------~~~~~~~~~~~i~~~i~~~~~~~~viil-~Dl~G 68 (122)
T cd00006 3 IIIATHG--GFASGLLNSAEMILGEQENVEAIDFP-----------PGESPDDLLEKIKAALAELDSGEGVLIL-TDLFG 68 (122)
T ss_pred EEEEcCH--HHHHHHHHHHHHhcCCCCCeEEEEeC-----------CCCCHHHHHHHHHHHHHHhCCCCcEEEE-EeCCC
Confidence 4788898 55556666666665543467677764 1235677778888888887643 44444 455 7
Q ss_pred HHHHHH
Q 025885 104 ALIAWY 109 (247)
Q Consensus 104 g~~a~~ 109 (247)
|.....
T Consensus 69 GSp~n~ 74 (122)
T cd00006 69 GSPNNA 74 (122)
T ss_pred CCHHHH
Confidence 765443
No 249
>TIGR02884 spore_pdaA delta-lactam-biosynthetic de-N-acetylase. Muramic delta-lactam is an unusual constituent of peptidoglycan, found only in bacterial spores in the peptidoglycan wall, or spore cortex. The proteins in this family are PdaA (yfjS), a member of a larger family of polysaccharide deacetylases, and are specificially involved in delta-lactam biosynthesis. PdaA acts immediately after CwlD, an N-acetylmuramoyl-L-alanine amidase and performs a de-N-acetylation. PdaA may also perform the following transpeptidation for lactam ring formation, as heterologous expression in E. coli of CwlD and PdaA together is sufficient for delta-lactam production.
Probab=55.97 E-value=15 Score=29.77 Aligned_cols=34 Identities=21% Similarity=0.277 Sum_probs=26.7
Q ss_pred CeEEEEcCC-CCChhhHHHHHHHHHHCCCEEEEeC
Q 025885 25 PAVLFIHGF-PELWYSWRNQLLYLSSRGYRAIAPD 58 (247)
Q Consensus 25 ~~vvllHG~-~~~~~~~~~~~~~l~~~g~~v~~~d 58 (247)
..||++|.. +.+......+++.|.++||+++.++
T Consensus 187 g~IiLlHd~~~~t~~aL~~ii~~lk~~Gy~fvtl~ 221 (224)
T TIGR02884 187 GAILLLHAVSKDNAEALDKIIKDLKEQGYTFKSLD 221 (224)
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEhH
Confidence 368899974 4556677888999999999988764
No 250
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=55.43 E-value=1.6e+02 Score=26.44 Aligned_cols=94 Identities=16% Similarity=0.135 Sum_probs=59.0
Q ss_pred EcCCCCC-hhhHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCC--------C-------------CCHHHHHHHHHHHH
Q 025885 30 IHGFPEL-WYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVT--------S-------------YTALHLVGDLIGLL 87 (247)
Q Consensus 30 lHG~~~~-~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~--------~-------------~~~~~~~~~~~~~~ 87 (247)
+=|-.++ ......+.+.+.+.|..++.+|.--.+.+..+.+.. . ...+.+++-...++
T Consensus 6 iigT~DTK~~E~~yl~~~i~~~G~~v~~iDvg~~~~~~~~~di~~~eVa~~~g~~~~~~~~~~dRg~ai~~M~~ga~~~v 85 (403)
T PF06792_consen 6 IIGTLDTKGEELLYLRDQIEAQGVEVLLIDVGTLGEPSFPPDISREEVARAAGDSIEAVRSSGDRGEAIEAMARGAARFV 85 (403)
T ss_pred EEEccCCCHHHHHHHHHHHHHCCCcEEEEEcCCCCCCCCCCCcCHHHHHHhcCCChHHhhccCCHHHHHHHHHHHHHHHH
Confidence 3344444 456777778888899999999975554443322110 0 11223333344444
Q ss_pred HHh----CCceEEEEEechhHHHHHHHHHhCCCceeEEEE
Q 025885 88 DKL----GIHQVFLVGHDWGALIAWYFCLFRPDRVKALVN 123 (247)
Q Consensus 88 ~~l----~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~ 123 (247)
..+ .++-++-+|-|.|..++.......|=-+-++++
T Consensus 86 ~~l~~~g~i~Gvi~~GGs~GT~lat~aMr~LPiG~PKlmV 125 (403)
T PF06792_consen 86 SDLYDEGKIDGVIGIGGSGGTALATAAMRALPIGFPKLMV 125 (403)
T ss_pred HHHHhcCCccEEEEecCCccHHHHHHHHHhCCCCCCeEEE
Confidence 444 245688999999999999999888866666654
No 251
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=54.37 E-value=18 Score=30.85 Aligned_cols=34 Identities=21% Similarity=0.301 Sum_probs=28.4
Q ss_pred HHHHHHHHhCCceEEEEEechhHHHHHHHHHhCC
Q 025885 82 DLIGLLDKLGIHQVFLVGHDWGALIAWYFCLFRP 115 (247)
Q Consensus 82 ~~~~~~~~l~~~~~~lvGhS~Gg~~a~~~a~~~p 115 (247)
-+.+.++..+++.-++.|-|+|+.++..+|....
T Consensus 28 GVl~aL~e~gi~~~~iaGtS~GAiva~l~A~g~~ 61 (306)
T COG1752 28 GVLKALEEAGIPIDVIAGTSAGAIVAALYAAGMD 61 (306)
T ss_pred HHHHHHHHcCCCccEEEecCHHHHHHHHHHcCCC
Confidence 3566777788888999999999999999998644
No 252
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=54.10 E-value=75 Score=27.82 Aligned_cols=104 Identities=11% Similarity=0.022 Sum_probs=65.7
Q ss_pred CeEEEEcCCCCChhhHH-HHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC--CceEEEEEec
Q 025885 25 PAVLFIHGFPELWYSWR-NQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLG--IHQVFLVGHD 101 (247)
Q Consensus 25 ~~vvllHG~~~~~~~~~-~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~lvGhS 101 (247)
.+||++=||.+....|. .......+.|+.++-+-.|-+-..-... ....+......-+..++...+ ..++++--.|
T Consensus 39 k~Iv~~~gWag~~~r~l~ky~~~Yq~~g~~~~~~tap~~~~~~~~s-~~~~sl~~~~~~l~~L~~~~~~~~~pi~fh~FS 117 (350)
T KOG2521|consen 39 KPIVVLLGWAGAIDRNLMKYSKIYQDKGYIVVRITAPCPSVFLSAS-RRILSLSLASTRLSELLSDYNSDPCPIIFHVFS 117 (350)
T ss_pred ccEEEEeeeccccchhHHHHHHHHhcCCceEEEecCcccccccccc-cccchhhHHHHHHHHHhhhccCCcCceEEEEec
Confidence 48888889988877764 4456666779999888777553221111 123344444566777777766 4478888999
Q ss_pred hhHHHHHHHH---H-hC-C---CceeEEEEecCCCC
Q 025885 102 WGALIAWYFC---L-FR-P---DRVKALVNMSVPFP 129 (247)
Q Consensus 102 ~Gg~~a~~~a---~-~~-p---~~v~~lv~~~~~~~ 129 (247)
+||...+... . ++ | +...+++..+.|..
T Consensus 118 ~ng~~~~~si~~~~~~~~~~~~~~~~~~~fdS~p~~ 153 (350)
T KOG2521|consen 118 GNGVRLMYSISLQLIKHEPKAAQLSGGIIFDSAPAR 153 (350)
T ss_pred CCceeehHHHHHHHhhcCchhHhhcCCceEeccccc
Confidence 9997654433 2 22 3 24566777776643
No 253
>TIGR02873 spore_ylxY probable sporulation protein, polysaccharide deacetylase family. Members of this protein family are most closely related to TIGR02764, a subset of polysaccharide deacetylase family proteins found in a species if and only if the species forms endospores like those of Bacillus subtilis or Clostridium tetani. This family is likewise restricted to spore-formers, but is not universal among them in having sequences with full-length matches to the model.
Probab=54.06 E-value=17 Score=30.47 Aligned_cols=34 Identities=12% Similarity=0.193 Sum_probs=27.5
Q ss_pred CeEEEEcCCCCChhhHHHHHHHHHHCCCEEEEeC
Q 025885 25 PAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPD 58 (247)
Q Consensus 25 ~~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~d 58 (247)
-.|||+|-...+......+++.|.++||+++.++
T Consensus 231 G~IILmHd~~~T~~aL~~iI~~Lk~kGy~fvtl~ 264 (268)
T TIGR02873 231 GAMVLMHPTASSTEGLEEMITIIKEKGYKIGTIT 264 (268)
T ss_pred CcEEEEcCCccHHHHHHHHHHHHHHCCCEEEeHH
Confidence 3588999776667777888999999999988764
No 254
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=53.83 E-value=22 Score=27.31 Aligned_cols=33 Identities=21% Similarity=0.191 Sum_probs=26.2
Q ss_pred HHHHHHHhCCceEEEEEechhHHHHHHHHHhCC
Q 025885 83 LIGLLDKLGIHQVFLVGHDWGALIAWYFCLFRP 115 (247)
Q Consensus 83 ~~~~~~~l~~~~~~lvGhS~Gg~~a~~~a~~~p 115 (247)
+.+.+++.++..-.++|-|.|+.++..++...+
T Consensus 16 vl~aL~e~gi~~d~v~GtSaGAi~aa~~a~g~~ 48 (172)
T cd07198 16 VAKALRERGPLIDIIAGTSAGAIVAALLASGRD 48 (172)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCC
Confidence 444555567777799999999999999998655
No 255
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=53.71 E-value=34 Score=30.12 Aligned_cols=44 Identities=23% Similarity=0.348 Sum_probs=34.4
Q ss_pred HHHHHHh---CCceEEEEEechhHHHHHHHHHhCCCceeEEEEecCCC
Q 025885 84 IGLLDKL---GIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPF 128 (247)
Q Consensus 84 ~~~~~~l---~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~~~~ 128 (247)
.+++... .++++++.|.|-=|..+|..|+ ..+||++++-+..+.
T Consensus 160 q~~~~~~~~~~i~~FvV~GaSKRGWTtWltaa-~D~RV~aivP~Vid~ 206 (367)
T PF10142_consen 160 QEFLKKKFGVNIEKFVVTGASKRGWTTWLTAA-VDPRVKAIVPIVIDV 206 (367)
T ss_pred HHHHHhhcCCCccEEEEeCCchHhHHHHHhhc-cCcceeEEeeEEEcc
Confidence 3444443 5789999999999999999999 556999998765443
No 256
>TIGR03586 PseI pseudaminic acid synthase.
Probab=53.40 E-value=1.5e+02 Score=25.69 Aligned_cols=93 Identities=12% Similarity=0.140 Sum_probs=58.6
Q ss_pred CCCeEEEEcCCCCChhhHHHHHHHHHHCCC-EEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEec
Q 025885 23 TGPAVLFIHGFPELWYSWRNQLLYLSSRGY-RAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVFLVGHD 101 (247)
Q Consensus 23 ~~~~vvllHG~~~~~~~~~~~~~~l~~~g~-~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~lvGhS 101 (247)
.+.||++--|. .+-..|...++.+.+.|. .++... +-|..|......+.. .|..+-+..+ -+|.+..|+
T Consensus 133 ~gkPvilstG~-~t~~Ei~~Av~~i~~~g~~~i~Llh----C~s~YP~~~~~~nL~----~i~~lk~~f~-~pVG~SDHt 202 (327)
T TIGR03586 133 TGKPIIMSTGI-ATLEEIQEAVEACREAGCKDLVLLK----CTSSYPAPLEDANLR----TIPDLAERFN-VPVGLSDHT 202 (327)
T ss_pred cCCcEEEECCC-CCHHHHHHHHHHHHHCCCCcEEEEe----cCCCCCCCcccCCHH----HHHHHHHHhC-CCEEeeCCC
Confidence 47899999999 588899999999988776 455544 233334322233332 2333344444 467788999
Q ss_pred hhHHHHHHHHHhCCCceeEEEEec
Q 025885 102 WGALIAWYFCLFRPDRVKALVNMS 125 (247)
Q Consensus 102 ~Gg~~a~~~a~~~p~~v~~lv~~~ 125 (247)
.|-.++....+.--.-|+.-+.++
T Consensus 203 ~G~~~~~aAva~GA~iIEkH~tld 226 (327)
T TIGR03586 203 LGILAPVAAVALGACVIEKHFTLD 226 (327)
T ss_pred CchHHHHHHHHcCCCEEEeCCChh
Confidence 997777666665555455554444
No 257
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=53.11 E-value=1.6e+02 Score=26.28 Aligned_cols=87 Identities=16% Similarity=0.107 Sum_probs=49.9
Q ss_pred CeEEEEcCCCC---ChhhHHHHHHHHHHCCCEEEEeCCCCC--CCCCCCCCCCCCCHHHHHHHHHHHHHH---hCCceEE
Q 025885 25 PAVLFIHGFPE---LWYSWRNQLLYLSSRGYRAIAPDLRGY--GDTDAPPSVTSYTALHLVGDLIGLLDK---LGIHQVF 96 (247)
Q Consensus 25 ~~vvllHG~~~---~~~~~~~~~~~l~~~g~~v~~~d~~G~--G~s~~~~~~~~~~~~~~~~~~~~~~~~---l~~~~~~ 96 (247)
.++|++.-... ........+..|.+.|+.|+-|..--+ |..... ...+.+++...+...+.. +.-+++.
T Consensus 113 ~plviaPamn~~m~~~p~~~~Nl~~L~~~G~~vv~P~~g~~ac~~~g~g---~~~~~~~i~~~v~~~~~~~~~~~~~~vl 189 (390)
T TIGR00521 113 APIILAPAMNENMYNNPAVQENIKRLKDDGYIFIEPDSGLLACGDEGKG---RLAEPETIVKAAEREFSPKEDLEGKRVL 189 (390)
T ss_pred CCEEEEeCCChhhcCCHHHHHHHHHHHHCCcEEECCCCcccccccccCC---CCCCHHHHHHHHHHHHhhccccCCceEE
Confidence 45666665432 223446677888888888776653222 332221 133566666666665543 3345666
Q ss_pred EEEe------------------chhHHHHHHHHHhC
Q 025885 97 LVGH------------------DWGALIAWYFCLFR 114 (247)
Q Consensus 97 lvGh------------------S~Gg~~a~~~a~~~ 114 (247)
+.|- .+|..+|..++.+-
T Consensus 190 it~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~G 225 (390)
T TIGR00521 190 ITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRG 225 (390)
T ss_pred EecCCccCCCCceeeecCCCcchHHHHHHHHHHHCC
Confidence 6666 36677777777654
No 258
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=50.99 E-value=31 Score=30.23 Aligned_cols=35 Identities=23% Similarity=0.401 Sum_probs=26.8
Q ss_pred EEEEcC-CCCChhhHHHHHHHHHHCCCEEEEeCCCCCCC
Q 025885 27 VLFIHG-FPELWYSWRNQLLYLSSRGYRAIAPDLRGYGD 64 (247)
Q Consensus 27 vvllHG-~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~ 64 (247)
|||+|. +|+. |+.+++.|.++|+.|.++-..+.+.
T Consensus 2 il~~~~~~p~~---~~~la~~L~~~G~~v~~~~~~~~~~ 37 (396)
T cd03818 2 ILFVHQNFPGQ---FRHLAPALAAQGHEVVFLTEPNAAP 37 (396)
T ss_pred EEEECCCCchh---HHHHHHHHHHCCCEEEEEecCCCCC
Confidence 678885 5653 7889999999999998876655543
No 259
>PRK10279 hypothetical protein; Provisional
Probab=50.75 E-value=22 Score=30.36 Aligned_cols=33 Identities=27% Similarity=0.396 Sum_probs=27.1
Q ss_pred HHHHHHHhCCceEEEEEechhHHHHHHHHHhCC
Q 025885 83 LIGLLDKLGIHQVFLVGHDWGALIAWYFCLFRP 115 (247)
Q Consensus 83 ~~~~~~~l~~~~~~lvGhS~Gg~~a~~~a~~~p 115 (247)
+.+.+++.+++.-.++|-|+|+.++..+|....
T Consensus 23 VL~aL~E~gi~~d~i~GtS~GAlvga~yA~g~~ 55 (300)
T PRK10279 23 VINALKKVGIEIDIVAGCSIGSLVGAAYACDRL 55 (300)
T ss_pred HHHHHHHcCCCcCEEEEEcHHHHHHHHHHcCCh
Confidence 555666678888899999999999999987654
No 260
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=49.59 E-value=25 Score=30.08 Aligned_cols=33 Identities=27% Similarity=0.365 Sum_probs=26.8
Q ss_pred HHHHHHHHhCCceEEEEEechhHHHHHHHHHhC
Q 025885 82 DLIGLLDKLGIHQVFLVGHDWGALIAWYFCLFR 114 (247)
Q Consensus 82 ~~~~~~~~l~~~~~~lvGhS~Gg~~a~~~a~~~ 114 (247)
-+.+.+++.|+..=.++|-|+|+.++..+|+..
T Consensus 32 GvL~aLee~gi~~d~v~GtSaGAi~ga~ya~g~ 64 (306)
T cd07225 32 GVIKALEEAGIPVDMVGGTSIGAFIGALYAEER 64 (306)
T ss_pred HHHHHHHHcCCCCCEEEEECHHHHHHHHHHcCC
Confidence 355666777887778999999999999998764
No 261
>COG3933 Transcriptional antiterminator [Transcription]
Probab=49.54 E-value=1.4e+02 Score=27.10 Aligned_cols=73 Identities=18% Similarity=0.161 Sum_probs=53.5
Q ss_pred CeEEEEcCCCCChhhHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEechhH
Q 025885 25 PAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVFLVGHDWGA 104 (247)
Q Consensus 25 ~~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~lvGhS~Gg 104 (247)
..||.-||... +.+...++..|-.. --+.++|+| -+.+..+..+.+.+.+++....+=.++=-|||.
T Consensus 110 ~vIiiAHG~sT-ASSmaevanrLL~~-~~~~aiDMP-----------Ldvsp~~vle~l~e~~k~~~~~~GlllLVDMGS 176 (470)
T COG3933 110 KVIIIAHGYST-ASSMAEVANRLLGE-EIFIAIDMP-----------LDVSPSDVLEKLKEYLKERDYRSGLLLLVDMGS 176 (470)
T ss_pred eEEEEecCcch-HHHHHHHHHHHhhc-cceeeecCC-----------CcCCHHHHHHHHHHHHHhcCccCceEEEEecch
Confidence 57899999865 45566777777765 468899997 345677888888888888877764555569999
Q ss_pred HHHHHH
Q 025885 105 LIAWYF 110 (247)
Q Consensus 105 ~~a~~~ 110 (247)
.....-
T Consensus 177 L~~f~~ 182 (470)
T COG3933 177 LTSFGS 182 (470)
T ss_pred HHHHHH
Confidence 776544
No 262
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=49.43 E-value=19 Score=33.42 Aligned_cols=32 Identities=28% Similarity=0.356 Sum_probs=25.3
Q ss_pred HHHHH-HHhCCceEEEEEechhHHHHHHHHHhC
Q 025885 83 LIGLL-DKLGIHQVFLVGHDWGALIAWYFCLFR 114 (247)
Q Consensus 83 ~~~~~-~~l~~~~~~lvGhS~Gg~~a~~~a~~~ 114 (247)
+.+++ +..|+++-.++|||+|=..|+..|.-.
T Consensus 254 La~ll~~~~GI~Pdav~GHSlGE~aAa~aAGvl 286 (538)
T TIGR02816 254 LTQLLCDEFAIKPDFALGYSKGEASMWASLGVW 286 (538)
T ss_pred HHHHHHHhcCCCCCEEeecCHHHHHHHHHhCCC
Confidence 34455 578899999999999999988887544
No 263
>TIGR03569 NeuB_NnaB N-acetylneuraminate synthase. This family is a subset of the Pfam model pfam03102 and is believed to include only authentic NeuB N-acetylneuraminate (sialic acid) synthase enzymes. The majority of the genes identified by this model are observed adjacent to both the NeuA and NeuC genes which together effect the biosynthesis of CMP-N-acetylneuraminate from UDP-N-acetylglucosamine.
Probab=46.10 E-value=1.9e+02 Score=25.17 Aligned_cols=93 Identities=12% Similarity=0.079 Sum_probs=59.1
Q ss_pred CCCeEEEEcCCCCChhhHHHHHHHHHHCCCE---EEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEE
Q 025885 23 TGPAVLFIHGFPELWYSWRNQLLYLSSRGYR---AIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVFLVG 99 (247)
Q Consensus 23 ~~~~vvllHG~~~~~~~~~~~~~~l~~~g~~---v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~lvG 99 (247)
.+.||++--|. .+-..|...++.+.+.|.. ++..-. .|..|......+.. .|..+.+..+ -+|.+-+
T Consensus 132 ~gkPvilStGm-atl~Ei~~Av~~i~~~G~~~~~i~llhC----~s~YP~~~~~~nL~----~I~~Lk~~f~-~pVG~Sd 201 (329)
T TIGR03569 132 FGKPVILSTGM-ATLEEIEAAVGVLRDAGTPDSNITLLHC----TTEYPAPFEDVNLN----AMDTLKEAFD-LPVGYSD 201 (329)
T ss_pred cCCcEEEECCC-CCHHHHHHHHHHHHHcCCCcCcEEEEEE----CCCCCCCcccCCHH----HHHHHHHHhC-CCEEECC
Confidence 47899999999 5888999999999887764 444331 23333322333333 2344444454 4788889
Q ss_pred echhHHHHHHHHHhCCCceeEEEEec
Q 025885 100 HDWGALIAWYFCLFRPDRVKALVNMS 125 (247)
Q Consensus 100 hS~Gg~~a~~~a~~~p~~v~~lv~~~ 125 (247)
|+.|-.++....+.-..-|+.-+.++
T Consensus 202 Ht~G~~~~~aAvalGA~iIEkH~tld 227 (329)
T TIGR03569 202 HTLGIEAPIAAVALGATVIEKHFTLD 227 (329)
T ss_pred CCccHHHHHHHHHcCCCEEEeCCChh
Confidence 99998777666666555556555554
No 264
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=45.06 E-value=61 Score=25.63 Aligned_cols=38 Identities=24% Similarity=0.198 Sum_probs=30.1
Q ss_pred CCCCeEEEEcCCCCChhhH--HHHHHHHHHCCCEEEEeCC
Q 025885 22 GTGPAVLFIHGFPELWYSW--RNQLLYLSSRGYRAIAPDL 59 (247)
Q Consensus 22 g~~~~vvllHG~~~~~~~~--~~~~~~l~~~g~~v~~~d~ 59 (247)
+.++.+|.+-|.+++..+= ..+.+.|.+.|++++..|-
T Consensus 20 ~~~~~viW~TGLSGsGKSTiA~ale~~L~~~G~~~y~LDG 59 (197)
T COG0529 20 GQKGAVIWFTGLSGSGKSTIANALEEKLFAKGYHVYLLDG 59 (197)
T ss_pred CCCCeEEEeecCCCCCHHHHHHHHHHHHHHcCCeEEEecC
Confidence 3567899999999987663 3455678888999999984
No 265
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=44.85 E-value=35 Score=26.53 Aligned_cols=33 Identities=24% Similarity=0.267 Sum_probs=24.8
Q ss_pred HHHHHHHhCCceEEEEEechhHHHHHHHHHhCC
Q 025885 83 LIGLLDKLGIHQVFLVGHDWGALIAWYFCLFRP 115 (247)
Q Consensus 83 ~~~~~~~l~~~~~~lvGhS~Gg~~a~~~a~~~p 115 (247)
+.+.+++.++..=.++|-|.||.++..++...+
T Consensus 17 vl~~L~e~~~~~d~i~GtSaGai~aa~~a~g~~ 49 (194)
T cd07207 17 ALKALEEAGILKKRVAGTSAGAITAALLALGYS 49 (194)
T ss_pred HHHHHHHcCCCcceEEEECHHHHHHHHHHcCCC
Confidence 334445556666789999999999999987543
No 266
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=44.84 E-value=1.3e+02 Score=27.20 Aligned_cols=70 Identities=13% Similarity=0.069 Sum_probs=52.8
Q ss_pred HHHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEechhHHHHHHHHHhCCCc--eeEEE
Q 025885 45 LYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVFLVGHDWGALIAWYFCLFRPDR--VKALV 122 (247)
Q Consensus 45 ~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~--v~~lv 122 (247)
+.+...+|.|+.+|-.|-- . --+++.+.+.++-+.+.++.+.+|--++=|.-|...|..+.+. +.++|
T Consensus 176 ~~ak~~~~DvvIvDTAGRl---------~-ide~Lm~El~~Ik~~~~P~E~llVvDam~GQdA~~~A~aF~e~l~itGvI 245 (451)
T COG0541 176 EKAKEEGYDVVIVDTAGRL---------H-IDEELMDELKEIKEVINPDETLLVVDAMIGQDAVNTAKAFNEALGITGVI 245 (451)
T ss_pred HHHHHcCCCEEEEeCCCcc---------c-ccHHHHHHHHHHHhhcCCCeEEEEEecccchHHHHHHHHHhhhcCCceEE
Confidence 4444556777777765421 1 1356788888888999999999999999999999999887765 67888
Q ss_pred Ee
Q 025885 123 NM 124 (247)
Q Consensus 123 ~~ 124 (247)
+.
T Consensus 246 lT 247 (451)
T COG0541 246 LT 247 (451)
T ss_pred EE
Confidence 75
No 267
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins []. These proteins include Escherichia coli and Bacillus subtilis ffh protein (P48), which seems to be the prokaryotic counterpart of SRP54; signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures, in conjunction with SRP, the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; bacterial FtsY protein, which is believed to play a similar role to that of the docking protein in eukaryotes; the pilA protein from Neisseria gonorrhoeae, the homologue of ftsY; and bacterial flagellar biosynthesis protein flhF.; GO: 0005525 GTP binding, 0006614 SRP-dependent cotranslational protein targeting to membrane; PDB: 2OG2_A 3B9Q_A 3DM9_B 3DMD_B 3E70_C 3DM5_B 2XXA_C 2J28_9 1ZU5_B 1ZU4_A ....
Probab=44.82 E-value=1.3e+02 Score=23.70 Aligned_cols=74 Identities=22% Similarity=0.192 Sum_probs=47.7
Q ss_pred HHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEechhHHHHHHHHHhCCC--ce
Q 025885 41 RNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVFLVGHDWGALIAWYFCLFRPD--RV 118 (247)
Q Consensus 41 ~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~--~v 118 (247)
+..++.+..+++.++.+|-+|... ......+++..+++......++||=-+..+.-....+..+-+ .+
T Consensus 73 ~~~l~~~~~~~~D~vlIDT~Gr~~----------~d~~~~~el~~~~~~~~~~~~~LVlsa~~~~~~~~~~~~~~~~~~~ 142 (196)
T PF00448_consen 73 REALEKFRKKGYDLVLIDTAGRSP----------RDEELLEELKKLLEALNPDEVHLVLSATMGQEDLEQALAFYEAFGI 142 (196)
T ss_dssp HHHHHHHHHTTSSEEEEEE-SSSS----------THHHHHHHHHHHHHHHSSSEEEEEEEGGGGGHHHHHHHHHHHHSST
T ss_pred HHHHHHHhhcCCCEEEEecCCcch----------hhHHHHHHHHHHhhhcCCccceEEEecccChHHHHHHHHHhhcccC
Confidence 344556666789999999988642 234567778888888877777666666656555544433222 37
Q ss_pred eEEEEe
Q 025885 119 KALVNM 124 (247)
Q Consensus 119 ~~lv~~ 124 (247)
.++|+.
T Consensus 143 ~~lIlT 148 (196)
T PF00448_consen 143 DGLILT 148 (196)
T ss_dssp CEEEEE
T ss_pred ceEEEE
Confidence 888875
No 268
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=44.27 E-value=40 Score=27.30 Aligned_cols=33 Identities=21% Similarity=0.306 Sum_probs=24.6
Q ss_pred HHHHHHHhCCceEEEEEechhHHHHHHHHHhCC
Q 025885 83 LIGLLDKLGIHQVFLVGHDWGALIAWYFCLFRP 115 (247)
Q Consensus 83 ~~~~~~~l~~~~~~lvGhS~Gg~~a~~~a~~~p 115 (247)
+.+.+++.+++.-.++|-|.|+.++..+|...+
T Consensus 18 vL~aL~e~gi~~~~i~GtSaGAi~aa~~a~g~~ 50 (221)
T cd07210 18 FLAALLEMGLEPSAISGTSAGALVGGLFASGIS 50 (221)
T ss_pred HHHHHHHcCCCceEEEEeCHHHHHHHHHHcCCC
Confidence 334444557766789999999999999987543
No 269
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=43.32 E-value=37 Score=28.50 Aligned_cols=31 Identities=16% Similarity=0.279 Sum_probs=25.6
Q ss_pred HHHHHHHhCCceEEEEEechhHHHHHHHHHh
Q 025885 83 LIGLLDKLGIHQVFLVGHDWGALIAWYFCLF 113 (247)
Q Consensus 83 ~~~~~~~l~~~~~~lvGhS~Gg~~a~~~a~~ 113 (247)
+.+.+++.++.-=.++|-|+|+.++..+|..
T Consensus 28 VL~aLeE~gi~~d~v~GtSaGAiiga~ya~g 58 (269)
T cd07227 28 ILQALEEAGIPIDAIGGTSIGSFVGGLYARE 58 (269)
T ss_pred HHHHHHHcCCCccEEEEECHHHHHHHHHHcC
Confidence 5556677788777899999999999999876
No 270
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=43.22 E-value=2.4e+02 Score=25.15 Aligned_cols=73 Identities=22% Similarity=0.225 Sum_probs=40.6
Q ss_pred CCeEEEEcCCCCC---hhhHHHHHHHHHHCCCEEEEeCCCCC---CCCCCCCCCCCCCHHHHHHHHHHHHHH--hCCceE
Q 025885 24 GPAVLFIHGFPEL---WYSWRNQLLYLSSRGYRAIAPDLRGY---GDTDAPPSVTSYTALHLVGDLIGLLDK--LGIHQV 95 (247)
Q Consensus 24 ~~~vvllHG~~~~---~~~~~~~~~~l~~~g~~v~~~d~~G~---G~s~~~~~~~~~~~~~~~~~~~~~~~~--l~~~~~ 95 (247)
+.++|++.-.... .......+..|.+.|+.|+-|+ +|+ |....- .-.+.+++...+...+.. +.-+++
T Consensus 116 ~~pvvi~Pamn~~m~~~p~~~~Nl~~L~~~G~~ii~P~-~g~la~~~~g~g---r~~~~~~I~~~~~~~~~~~~l~gk~v 191 (399)
T PRK05579 116 TAPVLVAPAMNTQMWENPATQRNLATLRSRGVEIIGPA-SGRLACGDVGPG---RMAEPEEIVAAAERALSPKDLAGKRV 191 (399)
T ss_pred CCCEEEEeCCChhHcCCHHHHHHHHHHHHCCCEEECCC-CccccCCCcCCC---CCCCHHHHHHHHHHHhhhcccCCCEE
Confidence 4566666644322 2234566788888899988665 343 322211 123456666666655533 333467
Q ss_pred EEEEe
Q 025885 96 FLVGH 100 (247)
Q Consensus 96 ~lvGh 100 (247)
.+.|-
T Consensus 192 lITgG 196 (399)
T PRK05579 192 LITAG 196 (399)
T ss_pred EEeCC
Confidence 77776
No 271
>COG3727 Vsr DNA G:T-mismatch repair endonuclease [DNA replication, recombination, and repair]
Probab=42.14 E-value=1e+02 Score=22.99 Aligned_cols=14 Identities=21% Similarity=0.422 Sum_probs=10.5
Q ss_pred HHHHHHCCCEEEEe
Q 025885 44 LLYLSSRGYRAIAP 57 (247)
Q Consensus 44 ~~~l~~~g~~v~~~ 57 (247)
+..|.+.|++|+.+
T Consensus 101 ~~~L~~~GwrvlvV 114 (150)
T COG3727 101 IKRLQQLGWRVLVV 114 (150)
T ss_pred HHHHHHcCCeEEEE
Confidence 45777889988765
No 272
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=40.50 E-value=17 Score=27.91 Aligned_cols=46 Identities=24% Similarity=0.309 Sum_probs=26.2
Q ss_pred CCCCCCCC-CCCCCCCCHHHHHHHH----HHHHHHh----CCceEEEEEechhHH
Q 025885 60 RGYGDTDA-PPSVTSYTALHLVGDL----IGLLDKL----GIHQVFLVGHDWGAL 105 (247)
Q Consensus 60 ~G~G~s~~-~~~~~~~~~~~~~~~~----~~~~~~l----~~~~~~lvGhS~Gg~ 105 (247)
-|||+... ......++...++.-+ ..+.+.. .+++|.|||.|++..
T Consensus 62 VGHG~~~~~~~~l~g~~a~~La~~l~~~~~~l~~~~~~~~~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 62 VGHGRDEFNNQTLAGYSADELANKLIKFKQQLKQKYGINISPKKISLVGCSLADN 116 (157)
T ss_dssp E--EESSTSSSEETTEEHHHHHHHHHHHHHHHHHHHTTT--ESEEEEESSS-S-T
T ss_pred EEeCCCcCCCceeCCCCHHHHHHHHHHHHHHHHHhccCCCCCCEEEEEEecccCC
Confidence 37776611 1122466788888888 4455444 245899999999887
No 273
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=39.70 E-value=69 Score=27.15 Aligned_cols=52 Identities=21% Similarity=0.150 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHhCC---ceEEEEEechhHHHHHHH---HHhCCCceeEEEEecCCCC
Q 025885 78 HLVGDLIGLLDKLGI---HQVFLVGHDWGALIAWYF---CLFRPDRVKALVNMSVPFP 129 (247)
Q Consensus 78 ~~~~~~~~~~~~l~~---~~~~lvGhS~Gg~~a~~~---a~~~p~~v~~lv~~~~~~~ 129 (247)
.+.+.+.+-++.+.. .+++|.|.|+|+.-+... +...-+++.+.+..++|..
T Consensus 91 aL~~aV~~~~~~lP~~~RPkL~l~GeSLGa~g~~~af~~~~~~~~~vdGalw~GpP~~ 148 (289)
T PF10081_consen 91 ALFEAVYARWSTLPEDRRPKLYLYGESLGAYGGEAAFDGLDDLRDRVDGALWVGPPFF 148 (289)
T ss_pred HHHHHHHHHHHhCCcccCCeEEEeccCccccchhhhhccHHHhhhhcceEEEeCCCCC
Confidence 344444445555532 379999999998766544 3334457999999888754
No 274
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=39.65 E-value=44 Score=26.77 Aligned_cols=33 Identities=21% Similarity=0.272 Sum_probs=25.8
Q ss_pred HHHHHHHhCCceEEEEEechhHHHHHHHHHhCC
Q 025885 83 LIGLLDKLGIHQVFLVGHDWGALIAWYFCLFRP 115 (247)
Q Consensus 83 ~~~~~~~l~~~~~~lvGhS~Gg~~a~~~a~~~p 115 (247)
+.+.+.+.+..--.++|-|.|+.++..++...+
T Consensus 16 vl~aL~e~g~~~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 16 VLKALAEAGIEPDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCc
Confidence 444455567766689999999999999998775
No 275
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=39.12 E-value=51 Score=25.36 Aligned_cols=32 Identities=22% Similarity=0.328 Sum_probs=24.4
Q ss_pred HHHHHHhCCceEEEEEechhHHHHHHHHHhCC
Q 025885 84 IGLLDKLGIHQVFLVGHDWGALIAWYFCLFRP 115 (247)
Q Consensus 84 ~~~~~~l~~~~~~lvGhS~Gg~~a~~~a~~~p 115 (247)
.+.+++.+...=.++|-|.|+.++..++...+
T Consensus 19 l~~L~e~g~~~d~i~GtSaGAi~aa~~a~g~~ 50 (175)
T cd07228 19 LRALEEEGIEIDIIAGSSIGALVGALYAAGHL 50 (175)
T ss_pred HHHHHHCCCCeeEEEEeCHHHHHHHHHHcCCC
Confidence 33445556666689999999999999987654
No 276
>COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms]
Probab=38.84 E-value=53 Score=30.81 Aligned_cols=100 Identities=17% Similarity=0.158 Sum_probs=54.7
Q ss_pred CCeEEEEcCCCCChhhHHHHHH------HHH--HCCCEEEEeCC----CCCCCCCCCCC-CCCCCHHHHHHHHHHHHHHh
Q 025885 24 GPAVLFIHGFPELWYSWRNQLL------YLS--SRGYRAIAPDL----RGYGDTDAPPS-VTSYTALHLVGDLIGLLDKL 90 (247)
Q Consensus 24 ~~~vvllHG~~~~~~~~~~~~~------~l~--~~g~~v~~~d~----~G~G~s~~~~~-~~~~~~~~~~~~~~~~~~~l 90 (247)
.-|+=|-=|++-.......+.+ .|+ .-|=+|+.-.- +-||..+.+.. ........+...+.+.+..
T Consensus 258 ~ipLTLSiGvg~g~~~~~elg~vA~~~L~lAlgRGGDQVvIke~~~k~~fyGG~s~~~ekrTRvRaRvis~al~d~i~e- 336 (655)
T COG3887 258 NIPLTLSIGVGYGENNLIELGEVAQSNLDLALGRGGDQVVIKENNGKVRFYGGKSNPMEKRTRVRARVISTALSDIIKE- 336 (655)
T ss_pred CcceEEEEEeccCcccHHHHHHHHHHhHHHHhccCCceEEEEcCCCceeeeCCCcchhHHhHHHHHHHHHHHHHHHHhh-
Confidence 3466666676655555444432 122 22445655432 33454444331 1122233344444444444
Q ss_pred CCceEEEEEe------chhHHHHHHHHHhCCCceeEEEEecC
Q 025885 91 GIHQVFLVGH------DWGALIAWYFCLFRPDRVKALVNMSV 126 (247)
Q Consensus 91 ~~~~~~lvGh------S~Gg~~a~~~a~~~p~~v~~lv~~~~ 126 (247)
.++|+++|| +.|+++++..-+..-.+ ++.+++++
T Consensus 337 -~d~VfImGHk~pDmDalGsAig~~~~A~~~~~-~a~~v~dp 376 (655)
T COG3887 337 -SDNVFIMGHKFPDMDALGSAIGMQKFASMNNK-EAFAVLDP 376 (655)
T ss_pred -cCcEEEEccCCCChHHHHHHHHHHHHHHhccc-ccEEEECc
Confidence 579999999 78999988776665544 66777764
No 277
>PF03283 PAE: Pectinacetylesterase
Probab=38.60 E-value=1.4e+02 Score=26.17 Aligned_cols=36 Identities=28% Similarity=0.171 Sum_probs=23.5
Q ss_pred CceEEEEEechhHHHHHHHH----HhCCCceeEEEEecCC
Q 025885 92 IHQVFLVGHDWGALIAWYFC----LFRPDRVKALVNMSVP 127 (247)
Q Consensus 92 ~~~~~lvGhS~Gg~~a~~~a----~~~p~~v~~lv~~~~~ 127 (247)
.++++|.|.|.||.-++..+ ...|..++-..+.++.
T Consensus 155 a~~vlltG~SAGG~g~~~~~d~~~~~lp~~~~v~~~~DsG 194 (361)
T PF03283_consen 155 AKQVLLTGCSAGGLGAILHADYVRDRLPSSVKVKCLSDSG 194 (361)
T ss_pred cceEEEeccChHHHHHHHHHHHHHHHhccCceEEEecccc
Confidence 46899999999998877654 4456434433333433
No 278
>PRK02399 hypothetical protein; Provisional
Probab=38.39 E-value=3e+02 Score=24.73 Aligned_cols=96 Identities=16% Similarity=0.191 Sum_probs=58.3
Q ss_pred EEEcCCCCCh-hhHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCC---------------------CCCCHHHHHHHHHH
Q 025885 28 LFIHGFPELW-YSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSV---------------------TSYTALHLVGDLIG 85 (247)
Q Consensus 28 vllHG~~~~~-~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~---------------------~~~~~~~~~~~~~~ 85 (247)
|++=|-.++. .+...+...+.++|..|+.+|.-..|....+.+. .....+.+++-...
T Consensus 6 I~iigT~DTK~~E~~yl~~~i~~~g~~v~~iDv~~~~~p~~~~dis~~~Va~~~g~~~~~~~~~~dRg~ai~~M~~ga~~ 85 (406)
T PRK02399 6 IYIAGTLDTKGEELAYVKDLIEAAGLEVVTVDVSGLGEPPFEPDISAEEVAEAAGDGIEAVFCGGDRGSAMAAMAEGAAA 85 (406)
T ss_pred EEEEeccCCcHHHHHHHHHHHHHCCCceEEEecCCCCCCCCCCCCCHHHHHHHcCCCHHHhhcCccHHHHHHHHHHHHHH
Confidence 4444555554 4566666777778999999998444422111100 00011333444444
Q ss_pred HHHHh----CCceEEEEEechhHHHHHHHHHhCCCceeEEEE
Q 025885 86 LLDKL----GIHQVFLVGHDWGALIAWYFCLFRPDRVKALVN 123 (247)
Q Consensus 86 ~~~~l----~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~ 123 (247)
++..| .++-++-+|-|.|..++.......|=-+-++++
T Consensus 86 ~v~~L~~~g~i~gviglGGs~GT~lat~aMr~LPiG~PKlmV 127 (406)
T PRK02399 86 FVRELYERGDVAGVIGLGGSGGTALATPAMRALPIGVPKLMV 127 (406)
T ss_pred HHHHHHhcCCccEEEEecCcchHHHHHHHHHhCCCCCCeEEE
Confidence 55443 355689999999999999998888866666654
No 279
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=37.80 E-value=1.5e+02 Score=23.01 Aligned_cols=54 Identities=19% Similarity=0.166 Sum_probs=36.5
Q ss_pred HHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEechh
Q 025885 46 YLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVFLVGHDWG 103 (247)
Q Consensus 46 ~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~lvGhS~G 103 (247)
.|.+.|++.+.+|.-..=.... ...-..++.+.+.++.+..+.+++.+|..|.|
T Consensus 35 ~Lk~~Gik~li~DkDNTL~~~~----~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaG 88 (168)
T PF09419_consen 35 HLKKKGIKALIFDKDNTLTPPY----EDEIPPEYAEWLNELKKQFGKDRVLIVSNSAG 88 (168)
T ss_pred hhhhcCceEEEEcCCCCCCCCC----cCcCCHHHHHHHHHHHHHCCCCeEEEEECCCC
Confidence 3778899999999876522111 11123455666676666666679999999986
No 280
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=37.69 E-value=2.5e+02 Score=24.95 Aligned_cols=85 Identities=19% Similarity=0.138 Sum_probs=53.2
Q ss_pred CeEEEEcCCCC-------ChhhHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEE
Q 025885 25 PAVLFIHGFPE-------LWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVFL 97 (247)
Q Consensus 25 ~~vvllHG~~~-------~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 97 (247)
..||++||-.. +..+|..+++.+.++|+ +-.+|+-=+|..+. .++-+.-+..++... +-.+
T Consensus 172 ~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~l-ip~~D~AYQGF~~G--------leeDa~~lR~~a~~~---~~~l 239 (396)
T COG1448 172 GSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGL-IPFFDIAYQGFADG--------LEEDAYALRLFAEVG---PELL 239 (396)
T ss_pred CCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCC-eeeeehhhhhhccc--------hHHHHHHHHHHHHhC---CcEE
Confidence 46999998643 35789999999998864 55667654443222 222233344344332 2278
Q ss_pred EEechhHHHHHHHHHhCCCceeEEEEecC
Q 025885 98 VGHDWGALIAWYFCLFRPDRVKALVNMSV 126 (247)
Q Consensus 98 vGhS~Gg~~a~~~a~~~p~~v~~lv~~~~ 126 (247)
|..|.--.+ ..|.|||.++.+++.
T Consensus 240 va~S~SKnf-----gLYgERVGa~~vva~ 263 (396)
T COG1448 240 VASSFSKNF-----GLYGERVGALSVVAE 263 (396)
T ss_pred EEehhhhhh-----hhhhhccceeEEEeC
Confidence 888865443 356889999988853
No 281
>TIGR03709 PPK2_rel_1 polyphosphate:nucleotide phosphotransferase, PPK2 family. Members of this protein family belong to the polyphosphate kinase 2 (PPK2) family, which is not related in sequence to PPK1. While PPK1 tends to act in the biosynthesis of polyphosphate, or poly(P), members of the PPK2 family tend to use the terminal phosphate of poly(P) to regenerate ATP or GTP from the corresponding nucleoside diphosphate, or ADP from AMP as is the case with polyphosphate:AMP phosphotransferase (PAP). Members of this protein family most likely transfer the terminal phosphate between poly(P) and some nucleotide, but it is not clear which.
Probab=36.99 E-value=45 Score=27.94 Aligned_cols=37 Identities=8% Similarity=0.079 Sum_probs=30.3
Q ss_pred CCeEEEEcCCCCCh--hhHHHHHHHHHHCCCEEEEeCCC
Q 025885 24 GPAVLFIHGFPELW--YSWRNQLLYLSSRGYRAIAPDLR 60 (247)
Q Consensus 24 ~~~vvllHG~~~~~--~~~~~~~~~l~~~g~~v~~~d~~ 60 (247)
.|.||++.|+-+++ ..-+.++..+..+|++|+++.-|
T Consensus 55 ~~vlIv~eG~DaAGKG~~I~~l~~~lDPRg~~V~s~~~P 93 (264)
T TIGR03709 55 RSLLLVLQAMDAAGKDGTIRHVMSGVNPQGCQVTSFKAP 93 (264)
T ss_pred CcEEEEEECCCCCCchHHHHHHHHhcCCCeeEEEeCCCC
Confidence 48999999997775 45678888888899999998554
No 282
>COG1576 Uncharacterized conserved protein [Function unknown]
Probab=36.62 E-value=1.1e+02 Score=23.50 Aligned_cols=48 Identities=25% Similarity=0.211 Sum_probs=27.7
Q ss_pred CCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEechhHHHHHH
Q 025885 51 GYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVFLVGHDWGALIAWY 109 (247)
Q Consensus 51 g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~lvGhS~Gg~~a~~ 109 (247)
|-.|++.|.+|-- .+.+++++.+..+. ..|-+=.+++|.|.|=--+..
T Consensus 67 ~~~vi~Ld~~Gk~----------~sSe~fA~~l~~~~-~~G~~i~f~IGG~~Gl~~~~~ 114 (155)
T COG1576 67 GSYVVLLDIRGKA----------LSSEEFADFLERLR-DDGRDISFLIGGADGLSEAVK 114 (155)
T ss_pred CCeEEEEecCCCc----------CChHHHHHHHHHHH-hcCCeEEEEEeCcccCCHHHH
Confidence 6789999988743 33455555544433 345223577787777544433
No 283
>PRK14974 cell division protein FtsY; Provisional
Probab=35.76 E-value=3e+02 Score=23.98 Aligned_cols=68 Identities=16% Similarity=0.092 Sum_probs=45.6
Q ss_pred HHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEechhHHHHHHHHHhCC--CceeEEEEe
Q 025885 47 LSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVFLVGHDWGALIAWYFCLFRP--DRVKALVNM 124 (247)
Q Consensus 47 l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~lvGhS~Gg~~a~~~a~~~p--~~v~~lv~~ 124 (247)
....|+.++.+|-.|.... ...+.+.+..+.+..+.+.+++|.-+.-|.-+..-+..+. -.+.++|+.
T Consensus 218 ~~~~~~DvVLIDTaGr~~~----------~~~lm~eL~~i~~~~~pd~~iLVl~a~~g~d~~~~a~~f~~~~~~~giIlT 287 (336)
T PRK14974 218 AKARGIDVVLIDTAGRMHT----------DANLMDELKKIVRVTKPDLVIFVGDALAGNDAVEQAREFNEAVGIDGVILT 287 (336)
T ss_pred HHhCCCCEEEEECCCccCC----------cHHHHHHHHHHHHhhCCceEEEeeccccchhHHHHHHHHHhcCCCCEEEEe
Confidence 3446789999998876432 2345666777777777777788887777766666555433 247888875
No 284
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=35.69 E-value=2.2e+02 Score=23.06 Aligned_cols=33 Identities=24% Similarity=0.197 Sum_probs=21.6
Q ss_pred eEEEEcCCCCChhhHHHHHHHHHHCCCEEEEeCCC
Q 025885 26 AVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLR 60 (247)
Q Consensus 26 ~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 60 (247)
.+..+-|... ..=+.+...|++.|++|++.|+.
T Consensus 15 k~~~vtGg~s--GIGrAia~~la~~Garv~v~dl~ 47 (256)
T KOG1200|consen 15 KVAAVTGGSS--GIGRAIAQLLAKKGARVAVADLD 47 (256)
T ss_pred ceeEEecCCc--hHHHHHHHHHHhcCcEEEEeecc
Confidence 3444444332 23356778889999999998864
No 285
>PHA02114 hypothetical protein
Probab=35.31 E-value=60 Score=22.77 Aligned_cols=33 Identities=12% Similarity=0.304 Sum_probs=26.8
Q ss_pred CeEEEEcCCCCChhhHHHHHHHHHHCCCEEEEe
Q 025885 25 PAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAP 57 (247)
Q Consensus 25 ~~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~ 57 (247)
-+||+=--+.-+..-|-.++..|.+.||.|++-
T Consensus 83 gtivldvn~amsr~pwi~v~s~le~~g~~vvat 115 (127)
T PHA02114 83 GTIVLDVNYAMSRAPWIKVISRLEEAGFNVVAT 115 (127)
T ss_pred CeEEEEehhhhccCcHHHHHHHHHhcCceeeeh
Confidence 366666677777788999999999999999874
No 286
>PF08433 KTI12: Chromatin associated protein KTI12 ; InterPro: IPR013641 This is a family of chromatin associated proteins which interact with the Elongator complex, a component of the elongating form of RNA polymerase II []. The Elongator complex has histone acetyltransferase activity. ; PDB: 3ADB_B 3ADC_B 3A4M_B 3A4N_B 3AM1_A 3A4L_B 3ADD_A.
Probab=34.97 E-value=96 Score=26.01 Aligned_cols=38 Identities=16% Similarity=0.274 Sum_probs=23.6
Q ss_pred eEEEEcCCCCChhhH--HHHHHHHHHCCCEEEEeCCCCCC
Q 025885 26 AVLFIHGFPELWYSW--RNQLLYLSSRGYRAIAPDLRGYG 63 (247)
Q Consensus 26 ~vvllHG~~~~~~~~--~~~~~~l~~~g~~v~~~d~~G~G 63 (247)
|+|++-|+|+++.+- ..+...|.+.++.|+.++--..+
T Consensus 2 pLiil~G~P~SGKTt~a~~L~~~~~~~~~~v~~i~~~~~~ 41 (270)
T PF08433_consen 2 PLIILCGLPCSGKTTRAKELKKYLEEKGKEVVIISDDSLG 41 (270)
T ss_dssp -EEEEE--TTSSHHHHHHHHHHHHHHTT--EEEE-THHHH
T ss_pred EEEEEEcCCCCcHHHHHHHHHHHHHhcCCEEEEEcccccc
Confidence 689999999998763 45667777788999888744433
No 287
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=34.77 E-value=1.9e+02 Score=23.50 Aligned_cols=37 Identities=14% Similarity=0.032 Sum_probs=25.8
Q ss_pred CCCeEEEEcCCCCChhh--H-HHHHHHHHHCCCEEEEeCC
Q 025885 23 TGPAVLFIHGFPELWYS--W-RNQLLYLSSRGYRAIAPDL 59 (247)
Q Consensus 23 ~~~~vvllHG~~~~~~~--~-~~~~~~l~~~g~~v~~~d~ 59 (247)
.++.|.|++=...+... + ....+.|.+.|+.+...++
T Consensus 31 ~~~~i~FIPtAs~~~~~~~Yv~k~~~~l~~lg~~v~~L~l 70 (224)
T COG3340 31 KRKTIAFIPTASVDSEDDFYVEKVRNALAKLGLEVSELHL 70 (224)
T ss_pred CCceEEEEecCccccchHHHHHHHHHHHHHcCCeeeeeec
Confidence 36789999876655433 2 3455678888998887776
No 288
>TIGR01425 SRP54_euk signal recognition particle protein SRP54. This model represents examples from the eukaryotic cytosol of the signal recognition particle protein component, SRP54. This GTP-binding protein is a component of the eukaryotic signal recognition particle, along with several other protein subunits and a 7S RNA. Some species, including Arabidopsis, have several closely related forms. The extreme C-terminal region is glycine-rich and lower in complexity, poorly conserved between species, and excluded from this model.
Probab=34.29 E-value=2.3e+02 Score=25.60 Aligned_cols=70 Identities=11% Similarity=0.059 Sum_probs=46.0
Q ss_pred HHHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEechhHHHHHHHHHhCCC--ceeEEE
Q 025885 45 LYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVFLVGHDWGALIAWYFCLFRPD--RVKALV 122 (247)
Q Consensus 45 ~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~--~v~~lv 122 (247)
..+...+|.++.+|-+|.-. ....+.+.+..+.+......++||--++-|.-+...|..+.+ .+.++|
T Consensus 176 ~~~~~~~~DvViIDTaGr~~----------~d~~lm~El~~i~~~~~p~e~lLVlda~~Gq~a~~~a~~F~~~~~~~g~I 245 (429)
T TIGR01425 176 EKFKKENFDIIIVDTSGRHK----------QEDSLFEEMLQVAEAIQPDNIIFVMDGSIGQAAEAQAKAFKDSVDVGSVI 245 (429)
T ss_pred HHHHhCCCCEEEEECCCCCc----------chHHHHHHHHHHhhhcCCcEEEEEeccccChhHHHHHHHHHhccCCcEEE
Confidence 34444589999999987421 124456667777777677778888777777666656555433 367777
Q ss_pred Ee
Q 025885 123 NM 124 (247)
Q Consensus 123 ~~ 124 (247)
+.
T Consensus 246 lT 247 (429)
T TIGR01425 246 IT 247 (429)
T ss_pred EE
Confidence 74
No 289
>KOG2170 consensus ATPase of the AAA+ superfamily [General function prediction only]
Probab=34.10 E-value=54 Score=28.17 Aligned_cols=29 Identities=24% Similarity=0.222 Sum_probs=19.9
Q ss_pred CCCeEEEEcCCCCChhhHH--HHHHHHHHCC
Q 025885 23 TGPAVLFIHGFPELWYSWR--NQLLYLSSRG 51 (247)
Q Consensus 23 ~~~~vvllHG~~~~~~~~~--~~~~~l~~~g 51 (247)
.+|.+|-+|||+|++.++- -+++.+-..|
T Consensus 108 ~KPLvLSfHG~tGTGKN~Va~iiA~n~~~~G 138 (344)
T KOG2170|consen 108 RKPLVLSFHGWTGTGKNYVAEIIAENLYRGG 138 (344)
T ss_pred CCCeEEEecCCCCCchhHHHHHHHHHHHhcc
Confidence 4688889999999998862 2344444333
No 290
>PRK11613 folP dihydropteroate synthase; Provisional
Probab=33.84 E-value=2.9e+02 Score=23.37 Aligned_cols=74 Identities=22% Similarity=0.343 Sum_probs=37.8
Q ss_pred CCeEEEEc--CCCCCh--------------hhHHHHHHHHHHCCCE--EEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q 025885 24 GPAVLFIH--GFPELW--------------YSWRNQLLYLSSRGYR--AIAPDLRGYGDTDAPPSVTSYTALHLVGDLIG 85 (247)
Q Consensus 24 ~~~vvllH--G~~~~~--------------~~~~~~~~~l~~~g~~--v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~ 85 (247)
+.++|++| |.|.+. ..+...+..+.+.|.. =+.+|. |+|.+.... .+ -.+.+.+..
T Consensus 133 ~~~vVlmh~~g~p~~~~~~~~y~dv~~~v~~~l~~~i~~a~~~GI~~~~IilDP-GiGF~k~~~----~n-~~ll~~l~~ 206 (282)
T PRK11613 133 GLPVCLMHMQGNPKTMQEAPKYDDVFAEVNRYFIEQIARCEAAGIAKEKLLLDP-GFGFGKNLS----HN-YQLLARLAE 206 (282)
T ss_pred CCCEEEEcCCCCCCccccCCCcccHHHHHHHHHHHHHHHHHHcCCChhhEEEeC-CCCcCCCHH----HH-HHHHHHHHH
Confidence 56778777 444432 1223445566677875 666775 666543211 11 122333333
Q ss_pred HHHHhCCceEEEEEechhHHH
Q 025885 86 LLDKLGIHQVFLVGHDWGALI 106 (247)
Q Consensus 86 ~~~~l~~~~~~lvGhS~Gg~~ 106 (247)
+ ..+ ..-+++|+|-=..+
T Consensus 207 l-~~l--g~Pilvg~SRKsfi 224 (282)
T PRK11613 207 F-HHF--NLPLLVGMSRKSMI 224 (282)
T ss_pred H-HhC--CCCEEEEecccHHH
Confidence 2 223 34678998854443
No 291
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=33.50 E-value=86 Score=23.97 Aligned_cols=36 Identities=19% Similarity=0.123 Sum_probs=27.0
Q ss_pred CCeEEEEcCCCCChhhH--HHHHHHHHHCCCEEEEeCC
Q 025885 24 GPAVLFIHGFPELWYSW--RNQLLYLSSRGYRAIAPDL 59 (247)
Q Consensus 24 ~~~vvllHG~~~~~~~~--~~~~~~l~~~g~~v~~~d~ 59 (247)
++.+|++-|.+++..+= +.+...|.+.|+.++..|-
T Consensus 1 ~g~vIwltGlsGsGKtTlA~~L~~~L~~~g~~~~~LDg 38 (156)
T PF01583_consen 1 KGFVIWLTGLSGSGKTTLARALERRLFARGIKVYLLDG 38 (156)
T ss_dssp S-EEEEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEEH
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEecC
Confidence 36799999999998652 4556778888999999974
No 292
>TIGR03707 PPK2_P_aer polyphosphate kinase 2, PA0141 family. Members of this protein family are designated polyphosphate kinase 2 (PPK2) after the characterized protein in Pseudomonas aeruginosa. This family comprises one of three well-separated clades in the larger family described by Pfam model pfam03976. PA0141 from this family has been shown capable of operating in reverse, with GDP preferred (over ADP) as a substrate, producing GTP (or ATP) by transfer of a phosphate residue from polyphosphate. Most species with a member of this family also encode a polyphosphate kinase 1 (PPK1).
Probab=33.39 E-value=50 Score=27.05 Aligned_cols=69 Identities=14% Similarity=0.116 Sum_probs=44.6
Q ss_pred CCeEEEEcCCCCCh--hhHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHH-HHHHHHHHhC-CceEEEEE
Q 025885 24 GPAVLFIHGFPELW--YSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVG-DLIGLLDKLG-IHQVFLVG 99 (247)
Q Consensus 24 ~~~vvllHG~~~~~--~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~-~~~~~~~~l~-~~~~~lvG 99 (247)
.|.||++.|+-+++ ..-..+...+..+|++|.++.-|.- ++... -+-.+-..+. ..++.+.=
T Consensus 30 ~~vlIv~eG~DaAGKg~~I~~l~~~lDPRg~~v~~~~~pt~--------------eE~~~p~lwRfw~~lP~~G~i~IF~ 95 (230)
T TIGR03707 30 ARVVIVFEGRDAAGKGGTIKRITEHLNPRGARVVALPKPSD--------------RERTQWYFQRYVQHLPAAGEIVLFD 95 (230)
T ss_pred CCEEEEEeCCCCCCchHHHHHHHHhcCCCeeEEEeCCCCCH--------------HHHcChHHHHHHHhCCCCCeEEEEe
Confidence 48899999998775 4567888888889999998765421 11111 1344455554 23677776
Q ss_pred echhHHH
Q 025885 100 HDWGALI 106 (247)
Q Consensus 100 hS~Gg~~ 106 (247)
-||=+-+
T Consensus 96 rSwY~~~ 102 (230)
T TIGR03707 96 RSWYNRA 102 (230)
T ss_pred CchhhhH
Confidence 6665543
No 293
>PF03205 MobB: Molybdopterin guanine dinucleotide synthesis protein B; PDB: 2F1R_B 1P9N_A 1NP6_B 2NPI_A 1XJC_A.
Probab=33.27 E-value=70 Score=23.78 Aligned_cols=41 Identities=22% Similarity=0.219 Sum_probs=27.7
Q ss_pred eEEEEcCCCCChhhH--HHHHHHHHHCCCEEEEeCCCCCCCCC
Q 025885 26 AVLFIHGFPELWYSW--RNQLLYLSSRGYRAIAPDLRGYGDTD 66 (247)
Q Consensus 26 ~vvllHG~~~~~~~~--~~~~~~l~~~g~~v~~~d~~G~G~s~ 66 (247)
++|.+-|..++..+. +.++..|.++|++|.++=.-++|...
T Consensus 1 pvv~VvG~~~sGKTTl~~~Li~~l~~~g~~v~~ik~~~~g~~~ 43 (140)
T PF03205_consen 1 PVVQVVGPKNSGKTTLIRKLINELKRRGYRVAVIKHTDHGQFE 43 (140)
T ss_dssp -EEEEEESTTSSHHHHHHHHHHHHHHTT--EEEEEE-STTSTT
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHhHcCCceEEEEEccCCCcc
Confidence 578888988887654 67889999999999866444555443
No 294
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=33.03 E-value=40 Score=30.33 Aligned_cols=38 Identities=13% Similarity=0.313 Sum_probs=27.4
Q ss_pred HHHHHHHhCCceEEEEEechhHHHHHHHHHhCCCceeE
Q 025885 83 LIGLLDKLGIHQVFLVGHDWGALIAWYFCLFRPDRVKA 120 (247)
Q Consensus 83 ~~~~~~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~ 120 (247)
+.+.+...++.+=+++|-|.|+.+|..++...++.+..
T Consensus 91 VLkaL~E~gl~p~vIsGTSaGAivAal~as~~~eel~~ 128 (421)
T cd07230 91 VLKALFEANLLPRIISGSSAGSIVAAILCTHTDEEIPE 128 (421)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCHHHHHH
Confidence 33444444666668999999999999999876665433
No 295
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=32.82 E-value=70 Score=26.06 Aligned_cols=34 Identities=24% Similarity=0.167 Sum_probs=24.6
Q ss_pred HHHHHHHhCCc--eEEEEEechhHHHHHHHHHhCCC
Q 025885 83 LIGLLDKLGIH--QVFLVGHDWGALIAWYFCLFRPD 116 (247)
Q Consensus 83 ~~~~~~~l~~~--~~~lvGhS~Gg~~a~~~a~~~p~ 116 (247)
+.+.+.+.++. .-.++|-|.|+.++..++...+.
T Consensus 17 Vl~~L~e~gi~~~~~~i~G~SAGAl~aa~~asg~~~ 52 (233)
T cd07224 17 VLSLLIEAGVINETTPLAGASAGSLAAACSASGLSP 52 (233)
T ss_pred HHHHHHHcCCCCCCCEEEEEcHHHHHHHHHHcCCCH
Confidence 33444445654 34899999999999999987653
No 296
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=31.91 E-value=1.8e+02 Score=26.19 Aligned_cols=100 Identities=18% Similarity=0.092 Sum_probs=57.9
Q ss_pred eEEEEcCCCCChhhHHHHHHHHHHCCCEEEEeCCCCCCC----CCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEec
Q 025885 26 AVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGD----TDAPPSVTSYTALHLVGDLIGLLDKLGIHQVFLVGHD 101 (247)
Q Consensus 26 ~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~----s~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~lvGhS 101 (247)
+++++---.+....=....+.+.+.+.-|+-.|+.++=. -+..-....++++.++++.......--...-+|.|--
T Consensus 50 ~villSd~~G~~d~~~s~a~al~~~~Alv~~vd~~~ylaaL~~dd~ecvylisd~Ealsr~~Qr~a~~g~yr~PVl~g~g 129 (456)
T COG3946 50 LVILLSDEAGIGDQERSRADALLARGALVAPVDLGAYLAALGADDNECVYLISDFEALSREAQRAADLGVYRLPVLTGPG 129 (456)
T ss_pred eeEEEEcccChhhhhcchhHHHhhcCCeeeccccchhhhccccCCCcceEEehhHHHHhHHHHHHhhccCcccceEeecC
Confidence 445544333333333455677777888898889887632 1111111123445555554433332223345788899
Q ss_pred hhHHHHHHHHHhCCCc-eeEEEEec
Q 025885 102 WGALIAWYFCLFRPDR-VKALVNMS 125 (247)
Q Consensus 102 ~Gg~~a~~~a~~~p~~-v~~lv~~~ 125 (247)
-||.++...++..|+. +.+.+.+.
T Consensus 130 ~Gg~~A~asaaqSp~atlag~Vsld 154 (456)
T COG3946 130 QGGTLAYASAAQSPDATLAGAVSLD 154 (456)
T ss_pred CCcHHHHHHHhhChhhhhcCccCCC
Confidence 9999999999988863 55555443
No 297
>COG0218 Predicted GTPase [General function prediction only]
Probab=31.23 E-value=75 Score=25.42 Aligned_cols=16 Identities=38% Similarity=0.576 Sum_probs=12.7
Q ss_pred EEEeCCCCCCCCCCCC
Q 025885 54 AIAPDLRGYGDTDAPP 69 (247)
Q Consensus 54 v~~~d~~G~G~s~~~~ 69 (247)
+..+|+||||....+.
T Consensus 72 ~~lVDlPGYGyAkv~k 87 (200)
T COG0218 72 LRLVDLPGYGYAKVPK 87 (200)
T ss_pred EEEEeCCCcccccCCH
Confidence 6678999999876653
No 298
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=30.99 E-value=77 Score=26.21 Aligned_cols=35 Identities=23% Similarity=0.234 Sum_probs=25.1
Q ss_pred HHHHHHHhCCc-eEEEEEechhHHHHHHHHHhCCCc
Q 025885 83 LIGLLDKLGIH-QVFLVGHDWGALIAWYFCLFRPDR 117 (247)
Q Consensus 83 ~~~~~~~l~~~-~~~lvGhS~Gg~~a~~~a~~~p~~ 117 (247)
+.+.+.+.++. -=.++|-|.|+.++..+++..+.+
T Consensus 16 vl~al~e~~~~~fd~i~GtSaGAi~a~~~~~g~~~~ 51 (266)
T cd07208 16 VLDAFLEAGIRPFDLVIGVSAGALNAASYLSGQRGR 51 (266)
T ss_pred HHHHHHHcCCCCCCEEEEECHHHHhHHHHHhCCcch
Confidence 33444444555 448999999999999998876543
No 299
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=30.72 E-value=96 Score=23.67 Aligned_cols=31 Identities=19% Similarity=0.282 Sum_probs=23.2
Q ss_pred HHHHHHhCCceEEEEEechhHHHHHHHHHhC
Q 025885 84 IGLLDKLGIHQVFLVGHDWGALIAWYFCLFR 114 (247)
Q Consensus 84 ~~~~~~l~~~~~~lvGhS~Gg~~a~~~a~~~ 114 (247)
.+.++..+...=.++|-|.|+.++..++...
T Consensus 19 l~~L~~~~~~~d~i~GtSaGal~a~~~a~g~ 49 (175)
T cd07205 19 LKALEEAGIPIDIVSGTSAGAIVGALYAAGY 49 (175)
T ss_pred HHHHHHcCCCeeEEEEECHHHHHHHHHHcCC
Confidence 3344445666668999999999999998654
No 300
>PRK09936 hypothetical protein; Provisional
Probab=30.44 E-value=1.5e+02 Score=25.34 Aligned_cols=50 Identities=16% Similarity=0.301 Sum_probs=36.2
Q ss_pred hhhHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC
Q 025885 37 WYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGI 92 (247)
Q Consensus 37 ~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~l~~ 92 (247)
...|+.+...+...|++.+.+-+-++|.++... .+.+..+..+.....|.
T Consensus 37 ~~qWq~~~~~~~~~G~~tLivQWt~yG~~~fg~------~~g~La~~l~~A~~~Gl 86 (296)
T PRK09936 37 DTQWQGLWSQLRLQGFDTLVVQWTRYGDADFGG------QRGWLAKRLAAAQQAGL 86 (296)
T ss_pred HHHHHHHHHHHHHcCCcEEEEEeeeccCCCccc------chHHHHHHHHHHHHcCC
Confidence 457999999999999999999999999885432 13444445444554443
No 301
>PRK14581 hmsF outer membrane N-deacetylase; Provisional
Probab=29.86 E-value=62 Score=31.04 Aligned_cols=78 Identities=17% Similarity=0.226 Sum_probs=48.1
Q ss_pred CCCeEEEEcCCCCC----------hhhHHHHHHHHHHCCCEEEEeC-CCC--CCCCCCCCCCC----CCCHHHHHHHHHH
Q 025885 23 TGPAVLFIHGFPEL----------WYSWRNQLLYLSSRGYRAIAPD-LRG--YGDTDAPPSVT----SYTALHLVGDLIG 85 (247)
Q Consensus 23 ~~~~vvllHG~~~~----------~~~~~~~~~~l~~~g~~v~~~d-~~G--~G~s~~~~~~~----~~~~~~~~~~~~~ 85 (247)
++.+||+.|..... ...+..++..|.++||+++..| +.. .|....|...- +-........+..
T Consensus 47 ~~~~VLmYH~V~d~~~~~~~~~Vspe~Fe~QL~~Lk~nGY~~VSL~el~~~~~g~~~LP~KaV~LTFDDGy~sny~~AlP 126 (672)
T PRK14581 47 NTFVVIAYHDVEDDSADQRYLSVRSSALNEQFVWLRDNGYHVVSVDQILAARNGGPTLPDKAVLLTFDDGYSSFYRRVYP 126 (672)
T ss_pred CceEEEEeCcccCCCCccCccccCHHHHHHHHHHHHHCcCEEecHHHHHHHHhcCCCCCCCeEEEEEEcCCcchHHHHHH
Confidence 45789999998543 2468889999999999999886 211 12221221100 1112234566778
Q ss_pred HHHHhCCce-EEEEEe
Q 025885 86 LLDKLGIHQ-VFLVGH 100 (247)
Q Consensus 86 ~~~~l~~~~-~~lvGh 100 (247)
+++..+.+- +.++|.
T Consensus 127 ILKkyg~pATfFvVg~ 142 (672)
T PRK14581 127 LLKAYKWSAVLAPVGT 142 (672)
T ss_pred HHHHcCCCEEEEEech
Confidence 899998874 555654
No 302
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=29.40 E-value=53 Score=29.23 Aligned_cols=39 Identities=21% Similarity=0.238 Sum_probs=28.4
Q ss_pred HHHHHHHhCCceEEEEEechhHHHHHHHHHhCCCceeEE
Q 025885 83 LIGLLDKLGIHQVFLVGHDWGALIAWYFCLFRPDRVKAL 121 (247)
Q Consensus 83 ~~~~~~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~l 121 (247)
+.+.+...|+.+=++.|-|.|+.+|..+|..-++.+..+
T Consensus 101 v~kaL~e~gl~p~~i~GtS~Gaivaa~~a~~~~~e~~~~ 139 (391)
T cd07229 101 VVKALWLRGLLPRIITGTATGALIAALVGVHTDEELLRF 139 (391)
T ss_pred HHHHHHHcCCCCceEEEecHHHHHHHHHHcCCHHHHHHH
Confidence 444455557776679999999999999998655544443
No 303
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=28.63 E-value=1e+02 Score=25.30 Aligned_cols=37 Identities=16% Similarity=0.140 Sum_probs=26.6
Q ss_pred CCCCeEEEEcCCCCChhhHHHHHHHHHHCCCEEEEeCC
Q 025885 22 GTGPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDL 59 (247)
Q Consensus 22 g~~~~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~d~ 59 (247)
++.|..|++-|..+..-. ..+...|+++||+|++-..
T Consensus 4 ~~~~k~VlItgcs~GGIG-~ala~ef~~~G~~V~AtaR 40 (289)
T KOG1209|consen 4 QSQPKKVLITGCSSGGIG-YALAKEFARNGYLVYATAR 40 (289)
T ss_pred ccCCCeEEEeecCCcchh-HHHHHHHHhCCeEEEEEcc
Confidence 456788888886554433 3677888999999998643
No 304
>PF04244 DPRP: Deoxyribodipyrimidine photo-lyase-related protein; InterPro: IPR007357 This family appears to be related to DNA photolyases.; PDB: 3ZXS_A.
Probab=28.32 E-value=1.7e+02 Score=23.88 Aligned_cols=50 Identities=20% Similarity=0.310 Sum_probs=28.2
Q ss_pred hhHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEE
Q 025885 38 YSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVFLV 98 (247)
Q Consensus 38 ~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~lv 98 (247)
..+++....|.++|++|.-..+.- +. +...+.+.+...++..+.+.+.++
T Consensus 49 saMRhfa~~L~~~G~~V~Y~~~~~------~~-----~~~s~~~~L~~~~~~~~~~~~~~~ 98 (224)
T PF04244_consen 49 SAMRHFADELRAKGFRVHYIELDD------PE-----NTQSFEDALARALKQHGIDRLHVM 98 (224)
T ss_dssp HHHHHHHHHHHHTT--EEEE-TT-------TT-------SSHHHHHHHHHHHH----EEEE
T ss_pred HHHHHHHHHHHhCCCEEEEEeCCC------cc-----ccccHHHHHHHHHHHcCCCEEEEE
Confidence 356778889999999999988741 11 112345567778888888877664
No 305
>PF13207 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6_G 2QT1_A 2QSZ_A 2QSY_A 2QT0_A 2QG6_A 2P0E_A ....
Probab=28.05 E-value=59 Score=22.83 Aligned_cols=31 Identities=32% Similarity=0.343 Sum_probs=24.3
Q ss_pred EEEEcCCCCChhhHHHHHHHHHHC-CCEEEEeCC
Q 025885 27 VLFIHGFPELWYSWRNQLLYLSSR-GYRAIAPDL 59 (247)
Q Consensus 27 vvllHG~~~~~~~~~~~~~~l~~~-g~~v~~~d~ 59 (247)
+|++.|-++++.+ .++..|++. |+.++..|-
T Consensus 1 vI~I~G~~gsGKS--T~a~~La~~~~~~~i~~d~ 32 (121)
T PF13207_consen 1 VIIISGPPGSGKS--TLAKELAERLGFPVISMDD 32 (121)
T ss_dssp EEEEEESTTSSHH--HHHHHHHHHHTCEEEEEHH
T ss_pred CEEEECCCCCCHH--HHHHHHHHHHCCeEEEecc
Confidence 6889999999887 456666665 899988876
No 306
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=28.03 E-value=51 Score=28.49 Aligned_cols=32 Identities=9% Similarity=0.154 Sum_probs=23.6
Q ss_pred HHHHHHHhCCceEEEEEechhHHHHHHHHHhC
Q 025885 83 LIGLLDKLGIHQVFLVGHDWGALIAWYFCLFR 114 (247)
Q Consensus 83 ~~~~~~~l~~~~~~lvGhS~Gg~~a~~~a~~~ 114 (247)
+.+.+...++.+-++.|-|.|+.+|..++..-
T Consensus 86 VlkaL~e~gl~p~~i~GsSaGAivaa~~~~~t 117 (323)
T cd07231 86 VVRTLVEHQLLPRVIAGSSVGSIVCAIIATRT 117 (323)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHcCC
Confidence 33444445776667999999999998887643
No 307
>PF14488 DUF4434: Domain of unknown function (DUF4434)
Probab=28.02 E-value=1.9e+02 Score=22.24 Aligned_cols=57 Identities=19% Similarity=0.363 Sum_probs=36.8
Q ss_pred hhhHHHHHHHHHHCCCEEEEeCCCCCCCCCC-CCC----CCCCCHHHHHHHHHHHHHHhCCc
Q 025885 37 WYSWRNQLLYLSSRGYRAIAPDLRGYGDTDA-PPS----VTSYTALHLVGDLIGLLDKLGIH 93 (247)
Q Consensus 37 ~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~-~~~----~~~~~~~~~~~~~~~~~~~l~~~ 93 (247)
...|+..+..+.+.|.+.+.+-.-|++.... |.. .......++++.+.+..+..|.+
T Consensus 19 ~~~W~~~~~~m~~~GidtlIlq~~~~~~~~~yps~~~~~~~~~~~~d~l~~~L~~A~~~Gmk 80 (166)
T PF14488_consen 19 PAQWREEFRAMKAIGIDTLILQWTGYGGFAFYPSKLSPGGFYMPPVDLLEMILDAADKYGMK 80 (166)
T ss_pred HHHHHHHHHHHHHcCCcEEEEEEeecCCcccCCccccCccccCCcccHHHHHHHHHHHcCCE
Confidence 4679999999999999988777666665331 111 01123445666666666766653
No 308
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=28.01 E-value=52 Score=29.46 Aligned_cols=39 Identities=21% Similarity=0.333 Sum_probs=28.3
Q ss_pred HHHHHHHhCCceEEEEEechhHHHHHHHHHhCCCceeEE
Q 025885 83 LIGLLDKLGIHQVFLVGHDWGALIAWYFCLFRPDRVKAL 121 (247)
Q Consensus 83 ~~~~~~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~l 121 (247)
+.+.+...++.+=+++|-|.|+.+|..++...++.+..+
T Consensus 85 VlkaL~e~gllp~iI~GtSAGAivaalla~~t~~el~~~ 123 (407)
T cd07232 85 VVKALLDADLLPNVISGTSGGSLVAALLCTRTDEELKQL 123 (407)
T ss_pred HHHHHHhCCCCCCEEEEECHHHHHHHHHHcCCHHHHHHH
Confidence 334444446666679999999999999998766655444
No 309
>COG4088 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=27.81 E-value=1.5e+02 Score=24.29 Aligned_cols=34 Identities=15% Similarity=0.227 Sum_probs=27.3
Q ss_pred eEEEEcCCCCChhhH--HHHHHHHHHCCCEEEEeCC
Q 025885 26 AVLFIHGFPELWYSW--RNQLLYLSSRGYRAIAPDL 59 (247)
Q Consensus 26 ~vvllHG~~~~~~~~--~~~~~~l~~~g~~v~~~d~ 59 (247)
++|++-|+|+++..- .+++..|.+++++|+...-
T Consensus 2 pLiIlTGyPgsGKTtfakeLak~L~~~i~~vi~l~k 37 (261)
T COG4088 2 PLIILTGYPGSGKTTFAKELAKELRQEIWRVIHLEK 37 (261)
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHhhhhccccch
Confidence 588999999998653 5678889988999887643
No 310
>cd06292 PBP1_LacI_like_10 Ligand-binding domain of uncharacterized DNA-binding regulatory proteins that are members of the LacI-GalR family of bacterial transcription repressors. This group includes the ligand-binding domain of uncharacterized DNA-binding regulatory proteins that are members of the LacI-GalR family of bacterial transcription repressors. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the sugar-binding domain of ABC-type transport systems that contain the type I periplasmic binding protein-like fold. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding which in turn changes the DNA binding affinity of the repressor.
Probab=27.46 E-value=3.3e+02 Score=21.89 Aligned_cols=75 Identities=16% Similarity=0.083 Sum_probs=40.6
Q ss_pred eEEEEcCCCCChhhHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEech
Q 025885 26 AVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVFLVGHDW 102 (247)
Q Consensus 26 ~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~lvGhS~ 102 (247)
.++++.............+..+.+.|..|+.+|..-.+....+. -..+.......+.+.+-..|.+++.+++.+.
T Consensus 58 giIi~~~~~~~~~~~~~~i~~~~~~~ipvV~i~~~~~~~~~~~~--V~~d~~~~~~~~~~~l~~~g~~~i~~i~~~~ 132 (273)
T cd06292 58 GVVFISSLHADTHADHSHYERLAERGLPVVLVNGRAPPPLKVPH--VSTDDALAMRLAVRHLVALGHRRIGFASGPG 132 (273)
T ss_pred EEEEeCCCCCcccchhHHHHHHHhCCCCEEEEcCCCCCCCCCCE--EEECcHHHHHHHHHHHHHCCCceEEEEeCCc
Confidence 45655544333333445566677778999999854322111111 1223344444555555556888888887543
No 311
>COG0159 TrpA Tryptophan synthase alpha chain [Amino acid transport and metabolism]
Probab=27.16 E-value=2.8e+02 Score=23.28 Aligned_cols=72 Identities=24% Similarity=0.226 Sum_probs=45.5
Q ss_pred CeEEEEcCCCCChhhHHHHHHHHHHCCCE-EEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEechh
Q 025885 25 PAVLFIHGFPELWYSWRNQLLYLSSRGYR-AIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVFLVGHDWG 103 (247)
Q Consensus 25 ~~vvllHG~~~~~~~~~~~~~~l~~~g~~-v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~lvGhS~G 103 (247)
|.+++.=-.+--..--..+++.+++.|.. ++.||+| .+..+++....+..+++.+.|+.=+-.
T Consensus 96 Pivlm~Y~Npi~~~Gie~F~~~~~~~GvdGlivpDLP----------------~ee~~~~~~~~~~~gi~~I~lvaPtt~ 159 (265)
T COG0159 96 PIVLMTYYNPIFNYGIEKFLRRAKEAGVDGLLVPDLP----------------PEESDELLKAAEKHGIDPIFLVAPTTP 159 (265)
T ss_pred CEEEEEeccHHHHhhHHHHHHHHHHcCCCEEEeCCCC----------------hHHHHHHHHHHHHcCCcEEEEeCCCCC
Confidence 44444444444444556677788888765 7889986 123446777788889999998866655
Q ss_pred HHHHHHHHH
Q 025885 104 ALIAWYFCL 112 (247)
Q Consensus 104 g~~a~~~a~ 112 (247)
---.-..+.
T Consensus 160 ~~rl~~i~~ 168 (265)
T COG0159 160 DERLKKIAE 168 (265)
T ss_pred HHHHHHHHH
Confidence 444444443
No 312
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=27.09 E-value=77 Score=25.71 Aligned_cols=90 Identities=24% Similarity=0.306 Sum_probs=52.0
Q ss_pred CCeEEEEcCCCCChhhHHHHHHHHHHCCCEEEEeCCCCCCCCCCC--------CCCCCCC--------HHHHHHHHHHHH
Q 025885 24 GPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAP--------PSVTSYT--------ALHLVGDLIGLL 87 (247)
Q Consensus 24 ~~~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~--------~~~~~~~--------~~~~~~~~~~~~ 87 (247)
-|.+++.||+.+....-......++..++.++..+....|.+... .....+. ...+..+.....
T Consensus 49 ~p~v~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (299)
T COG1073 49 LPAVVFLHGFGSSKEQSLGYAVLLAEKGYRVLAGDASLFGESGGDPRGLADSEGYAEDFSAAVLLLLSEGVLDKDYRLLG 128 (299)
T ss_pred CceEEeccCccccccCcchHHHHhhhceeEEeeeccccccccccccccccCccccccccchhheeeeccccccHHHHHHh
Confidence 477999999998887765567777777888777765222221110 0000110 001111111111
Q ss_pred HHhCCceEEEEEechhHHHHHHHHHhCC
Q 025885 88 DKLGIHQVFLVGHDWGALIAWYFCLFRP 115 (247)
Q Consensus 88 ~~l~~~~~~lvGhS~Gg~~a~~~a~~~p 115 (247)
. ...+....|++.|+..+..++...+
T Consensus 129 ~--~~~~~~~~g~~~~~~~~~~~~~~~~ 154 (299)
T COG1073 129 A--SLGPRILAGLSLGGPSAGALLAWGP 154 (299)
T ss_pred h--hcCcceEEEEEeeccchHHHhhcch
Confidence 1 1257888899999988888887776
No 313
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=26.80 E-value=1.1e+02 Score=25.15 Aligned_cols=20 Identities=20% Similarity=0.090 Sum_probs=18.1
Q ss_pred EEEEechhHHHHHHHHHhCC
Q 025885 96 FLVGHDWGALIAWYFCLFRP 115 (247)
Q Consensus 96 ~lvGhS~Gg~~a~~~a~~~p 115 (247)
.++|-|.|+.++..++...+
T Consensus 34 ~i~GtSAGAl~aa~~a~g~~ 53 (243)
T cd07204 34 RIAGASAGAIVAAVVLCGVS 53 (243)
T ss_pred EEEEEcHHHHHHHHHHhCCC
Confidence 89999999999999998764
No 314
>PRK06029 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Provisional
Probab=26.51 E-value=3.2e+02 Score=21.48 Aligned_cols=45 Identities=22% Similarity=0.285 Sum_probs=30.3
Q ss_pred HHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHH-HHHHHHhCCc
Q 025885 41 RNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDL-IGLLDKLGIH 93 (247)
Q Consensus 41 ~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~-~~~~~~l~~~ 93 (247)
+..+..|.+.|+.|+-|.. |+ -.+| .+.+++++.+ -.+++.+|++
T Consensus 132 ~~Nl~~L~~~G~~vi~P~~-g~--~a~p-----~~~~~~~~~~v~~~~~~l~~~ 177 (185)
T PRK06029 132 LRNMTKLAEMGAIIMPPVP-AF--YHRP-----QTLEDMVDQTVGRVLDLFGIE 177 (185)
T ss_pred HHHHHHHHHCcCEEECCCc-cc--ccCC-----CCHHHHHHHHHHHHHHhcCCC
Confidence 4567788888998887765 32 2233 3677777765 4688888865
No 315
>PF03976 PPK2: Polyphosphate kinase 2 (PPK2); InterPro: IPR022488 This presumed domain is found in one or two copies per protein. The domain is about 230 amino acids in length and has many conserved motifs, it has polyphosphate kinase activity [, ].; PDB: 3CZP_A 3RHF_D 3CZQ_B.
Probab=26.34 E-value=29 Score=28.38 Aligned_cols=37 Identities=19% Similarity=0.316 Sum_probs=27.0
Q ss_pred CCeEEEEcCCCCChh--hHHHHHHHHHHCCCEEEEeCCC
Q 025885 24 GPAVLFIHGFPELWY--SWRNQLLYLSSRGYRAIAPDLR 60 (247)
Q Consensus 24 ~~~vvllHG~~~~~~--~~~~~~~~l~~~g~~v~~~d~~ 60 (247)
.|.||++.|+.+++. .-..+...|..+|++|.++.-|
T Consensus 30 ~~vlIl~eG~d~sGKg~~I~~l~~~lDPR~~~v~~~~~p 68 (228)
T PF03976_consen 30 IPVLILFEGWDASGKGGTINRLIEWLDPRGFRVHAFGKP 68 (228)
T ss_dssp HEEEEEEEESTTSSHHHHHHHHHCCS-GGGEEEEE-SS-
T ss_pred CcEEEEEeccccCCchHHHHHHHHhCCCCeeEEEeCCCC
Confidence 368999999988865 4566777777889999998765
No 316
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=26.20 E-value=75 Score=26.18 Aligned_cols=16 Identities=25% Similarity=0.605 Sum_probs=13.1
Q ss_pred CCceEEEEEechhHHH
Q 025885 91 GIHQVFLVGHDWGALI 106 (247)
Q Consensus 91 ~~~~~~lvGhS~Gg~~ 106 (247)
..+.|++.|||+|..=
T Consensus 233 ~i~~I~i~GhSl~~~D 248 (270)
T PF14253_consen 233 DIDEIIIYGHSLGEVD 248 (270)
T ss_pred CCCEEEEEeCCCchhh
Confidence 3578999999999753
No 317
>PRK15180 Vi polysaccharide biosynthesis protein TviD; Provisional
Probab=25.70 E-value=2.3e+02 Score=26.31 Aligned_cols=79 Identities=18% Similarity=0.220 Sum_probs=53.8
Q ss_pred CCeEEEEcCCCCCh-hhHHHHHHHHHHCCCEEEEeCCCCCCCCCC--------CC------C---------CCCCCHHHH
Q 025885 24 GPAVLFIHGFPELW-YSWRNQLLYLSSRGYRAIAPDLRGYGDTDA--------PP------S---------VTSYTALHL 79 (247)
Q Consensus 24 ~~~vvllHG~~~~~-~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~--------~~------~---------~~~~~~~~~ 79 (247)
..-.+.+-|++-.. +..+++.+.|...+-+++-+++++-|.-.. |. + ....+...+
T Consensus 96 SqKkl~~dG~~LQ~NyVvrHF~Effsd~~R~~mfWSLa~Ad~raqRlAYL~ddP~FAgLs~D~r~lLs~ivvrq~teaEI 175 (831)
T PRK15180 96 SQKKIMAYGFCLQINYLTRHFYEFFSQTERACMYWSLATQGNRHKLLAYLKDDPCFAGMSEDDRALLSNINVEQMDEHAI 175 (831)
T ss_pred ceeeEEeccchhhHHHHHHHHHHHhhhcchhhhhhhcccccchhHHHHHhhcChhhhhhhHhHHHHHHhhHhhcccHHHH
Confidence 34567778876543 456778888888887777778888775432 11 0 011234556
Q ss_pred HHHHHHHHHHhCCceEEEEEech
Q 025885 80 VGDLIGLLDKLGIHQVFLVGHDW 102 (247)
Q Consensus 80 ~~~~~~~~~~l~~~~~~lvGhS~ 102 (247)
-+|+.++..-+|.++|.+|-|--
T Consensus 176 EeDmmeIVqLLGk~rVvfVTHVN 198 (831)
T PRK15180 176 EQDMMEIVQLLGRDRVMFMTHVD 198 (831)
T ss_pred HHHHHHHHHHhCCCcEEEEEeec
Confidence 67888888889999999999963
No 318
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=25.14 E-value=90 Score=26.83 Aligned_cols=22 Identities=27% Similarity=0.404 Sum_probs=18.4
Q ss_pred CCceEEEEEechhHHHHHHHHH
Q 025885 91 GIHQVFLVGHDWGALIAWYFCL 112 (247)
Q Consensus 91 ~~~~~~lvGhS~Gg~~a~~~a~ 112 (247)
+.++.++.|||+|=..|+.++.
T Consensus 83 ~~~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 83 GVKPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred CCCCceeecccHhHHHHHHHcc
Confidence 4678899999999998887764
No 319
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=25.01 E-value=86 Score=26.81 Aligned_cols=29 Identities=17% Similarity=0.161 Sum_probs=21.8
Q ss_pred HHHhCCceEEEEEechhHHHHHHHHHhCC
Q 025885 87 LDKLGIHQVFLVGHDWGALIAWYFCLFRP 115 (247)
Q Consensus 87 ~~~l~~~~~~lvGhS~Gg~~a~~~a~~~p 115 (247)
+...++..-++.|-|.|+.+|..++....
T Consensus 91 L~e~~l~~~~i~GtSaGAi~aa~~~~~~~ 119 (298)
T cd07206 91 LWEQDLLPRVISGSSAGAIVAALLGTHTD 119 (298)
T ss_pred HHHcCCCCCEEEEEcHHHHHHHHHHcCCc
Confidence 33345556679999999999999886543
No 320
>PF05724 TPMT: Thiopurine S-methyltransferase (TPMT); InterPro: IPR008854 This family consists of thiopurine S-methyltransferase proteins from both eukaryotes and prokaryotes. Thiopurine S-methyltransferase (TPMT) is a cytosolic enzyme that catalyses S-methylation of aromatic and heterocyclic sulphydryl compounds, including anticancer and immunosuppressive thiopurines [].; GO: 0008119 thiopurine S-methyltransferase activity, 0008152 metabolic process, 0005737 cytoplasm; PDB: 1PJZ_A 2H11_A 2BZG_A 3LCC_A 3BGD_A 2GB4_A 3BGI_B.
Probab=24.87 E-value=88 Score=25.28 Aligned_cols=30 Identities=20% Similarity=0.417 Sum_probs=22.3
Q ss_pred CeEEEEcCCCCChhhHHHHHHHHHHCCCEEEEeCC
Q 025885 25 PAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDL 59 (247)
Q Consensus 25 ~~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~d~ 59 (247)
+.-||+.|-+-+.. +..|+++||+|+.+|+
T Consensus 38 ~~rvLvPgCG~g~D-----~~~La~~G~~VvGvDl 67 (218)
T PF05724_consen 38 GGRVLVPGCGKGYD-----MLWLAEQGHDVVGVDL 67 (218)
T ss_dssp SEEEEETTTTTSCH-----HHHHHHTTEEEEEEES
T ss_pred CCeEEEeCCCChHH-----HHHHHHCCCeEEEEec
Confidence 44678888776643 4567788999999997
No 321
>PF13383 Methyltransf_22: Methyltransferase domain
Probab=24.52 E-value=1.3e+02 Score=24.76 Aligned_cols=36 Identities=25% Similarity=0.464 Sum_probs=31.3
Q ss_pred CCeEEEEcCCCCChhhHHHHHHHHHHCCCEEEEeCC
Q 025885 24 GPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDL 59 (247)
Q Consensus 24 ~~~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~d~ 59 (247)
+..+|=+||.+.....|..+...|++.||+++-.+.
T Consensus 192 ~Qi~iEiH~~~~~~~~~~~~l~~l~~~gfr~F~~e~ 227 (242)
T PF13383_consen 192 CQILIEIHGWPSEHREWYKLLQELEKAGFRLFNVEP 227 (242)
T ss_pred cEEEEEEEeCccchhHHHHHHHHHHHCCcEEEEecC
Confidence 577888999998888899999999999999987654
No 322
>PRK13256 thiopurine S-methyltransferase; Reviewed
Probab=24.22 E-value=1e+02 Score=25.22 Aligned_cols=28 Identities=25% Similarity=0.329 Sum_probs=19.7
Q ss_pred EEEEcCCCCChhhHHHHHHHHHHCCCEEEEeCC
Q 025885 27 VLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDL 59 (247)
Q Consensus 27 vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~d~ 59 (247)
-||+.|-+.+ .-+..|+++||+|+++|+
T Consensus 46 rvLvPgCGkg-----~D~~~LA~~G~~V~GvDl 73 (226)
T PRK13256 46 VCLIPMCGCS-----IDMLFFLSKGVKVIGIEL 73 (226)
T ss_pred eEEEeCCCCh-----HHHHHHHhCCCcEEEEec
Confidence 4566665544 334567889999999997
No 323
>KOG0780 consensus Signal recognition particle, subunit Srp54 [Intracellular trafficking, secretion, and vesicular transport]
Probab=24.10 E-value=5.2e+02 Score=23.35 Aligned_cols=70 Identities=11% Similarity=0.020 Sum_probs=43.7
Q ss_pred HHHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEechhHHHHHHHHHhCCC--ceeEEE
Q 025885 45 LYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVFLVGHDWGALIAWYFCLFRPD--RVKALV 122 (247)
Q Consensus 45 ~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~--~v~~lv 122 (247)
+.+.+.+|.||.+|--|-. ..-..+.+.+.++.+.++++.+++|=-+.=|..|..-|..+.+ .|.++|
T Consensus 177 ~~fKke~fdvIIvDTSGRh----------~qe~sLfeEM~~v~~ai~Pd~vi~VmDasiGQaae~Qa~aFk~~vdvg~vI 246 (483)
T KOG0780|consen 177 DRFKKENFDVIIVDTSGRH----------KQEASLFEEMKQVSKAIKPDEIIFVMDASIGQAAEAQARAFKETVDVGAVI 246 (483)
T ss_pred HHHHhcCCcEEEEeCCCch----------hhhHHHHHHHHHHHhhcCCCeEEEEEeccccHhHHHHHHHHHHhhccceEE
Confidence 4455678888888865531 1234566778888888888877776555555555555544443 355666
Q ss_pred Ee
Q 025885 123 NM 124 (247)
Q Consensus 123 ~~ 124 (247)
+.
T Consensus 247 lT 248 (483)
T KOG0780|consen 247 LT 248 (483)
T ss_pred EE
Confidence 53
No 324
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=24.00 E-value=5e+02 Score=22.80 Aligned_cols=90 Identities=13% Similarity=0.023 Sum_probs=49.6
Q ss_pred CCeEEEEcCCCCC----h-hhHHHHHHHHHH-CCCEEEEeCCCCCCCCCCCCCC---------C-----CCCH-HHHHHH
Q 025885 24 GPAVLFIHGFPEL----W-YSWRNQLLYLSS-RGYRAIAPDLRGYGDTDAPPSV---------T-----SYTA-LHLVGD 82 (247)
Q Consensus 24 ~~~vvllHG~~~~----~-~~~~~~~~~l~~-~g~~v~~~d~~G~G~s~~~~~~---------~-----~~~~-~~~~~~ 82 (247)
+..|+++-|-... . ..--.+...|.. .+-+++++--+|.|.-...... . ..+. .++...
T Consensus 31 k~lV~CfDGT~nrfg~qp~TNVv~Ly~sl~r~d~~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL~~nI~~A 110 (423)
T COG3673 31 KRLVFCFDGTWNRFGAQPPTNVVLLYASLQRADGVTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQGLVQNIREA 110 (423)
T ss_pred ceEEEEecCchhhcCCCCcchHHHHHHHHhcCCCceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHHHHHHHHHHH
Confidence 3567777774222 1 223334444544 4778888877888754221100 0 0111 122222
Q ss_pred HHHHHHHhC-CceEEEEEechhHHHHHHHHHh
Q 025885 83 LIGLLDKLG-IHQVFLVGHDWGALIAWYFCLF 113 (247)
Q Consensus 83 ~~~~~~~l~-~~~~~lvGhS~Gg~~a~~~a~~ 113 (247)
..-++.+.. -++|++.|+|-|+.++..+|..
T Consensus 111 YrFL~~~yepGD~Iy~FGFSRGAf~aRVlagm 142 (423)
T COG3673 111 YRFLIFNYEPGDEIYAFGFSRGAFSARVLAGM 142 (423)
T ss_pred HHHHHHhcCCCCeEEEeeccchhHHHHHHHHH
Confidence 333444443 3689999999999999888864
No 325
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=23.96 E-value=3.2e+02 Score=25.92 Aligned_cols=42 Identities=17% Similarity=0.079 Sum_probs=28.7
Q ss_pred CCeEEEEcCCCCCh---hhHHHHHHHHHHCCCEEEEeCCCC--CCCC
Q 025885 24 GPAVLFIHGFPELW---YSWRNQLLYLSSRGYRAIAPDLRG--YGDT 65 (247)
Q Consensus 24 ~~~vvllHG~~~~~---~~~~~~~~~l~~~g~~v~~~d~~G--~G~s 65 (247)
+.|+|++||-.+.. .+-..+...|..+|..|-..-+|+ |+.+
T Consensus 551 ~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~ 597 (620)
T COG1506 551 KTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFS 597 (620)
T ss_pred CCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCC
Confidence 57899999987653 334566777887888776665554 4444
No 326
>TIGR01626 ytfJ_HI0045 conserved hypothetical protein YtfJ-family, TIGR01626. This model represents sequences from gamma proteobacteria that are related to the E. coli protein, YtfJ.
Probab=23.81 E-value=1.6e+02 Score=23.19 Aligned_cols=90 Identities=10% Similarity=-0.053 Sum_probs=54.0
Q ss_pred EEeCCEEEEEEeeC----CCCeEE--EEcCCCCChhhHHHHHHHHHHCCCEE------EEeCCCCCCCCCCCCCCCCCCH
Q 025885 9 VATNGINMHVASIG----TGPAVL--FIHGFPELWYSWRNQLLYLSSRGYRA------IAPDLRGYGDTDAPPSVTSYTA 76 (247)
Q Consensus 9 ~~~~g~~~~~~~~g----~~~~vv--llHG~~~~~~~~~~~~~~l~~~g~~v------~~~d~~G~G~s~~~~~~~~~~~ 76 (247)
+.++|.++.|..+. .|++.| +.=||......-.+++..|.++|+.+ +.++.. + ..
T Consensus 40 ~~~~~~~~~y~~~~~~~l~GKV~lvn~~Aswc~~c~~e~P~l~~l~~~~~~~~~y~~t~~IN~d-----d--------~~ 106 (184)
T TIGR01626 40 IVLSGKDTVYQPWGSAELAGKVRVVHHIAGRTSAKEXNASLIDAIKAAKFPPVKYQTTTIINAD-----D--------AI 106 (184)
T ss_pred EEEcCCcccceeccHHHcCCCEEEEEEEecCCChhhccchHHHHHHHcCCCcccccceEEEECc-----c--------ch
Confidence 44567778887765 255544 44478777777788999998888887 777531 0 11
Q ss_pred HHHHHHHHHHHHHhCCc-eEEEEEechhHHHHHHHH
Q 025885 77 LHLVGDLIGLLDKLGIH-QVFLVGHDWGALIAWYFC 111 (247)
Q Consensus 77 ~~~~~~~~~~~~~l~~~-~~~lvGhS~Gg~~a~~~a 111 (247)
......+..+++..+.+ ++..+..|-.|.++..+.
T Consensus 107 ~~~~~fVk~fie~~~~~~P~~~vllD~~g~v~~~~g 142 (184)
T TIGR01626 107 VGTGMFVKSSAKKGKKENPWSQVVLDDKGAVKNAWQ 142 (184)
T ss_pred hhHHHHHHHHHHHhcccCCcceEEECCcchHHHhcC
Confidence 22233456666666543 333444555665555443
No 327
>PRK14582 pgaB outer membrane N-deacetylase; Provisional
Probab=23.72 E-value=85 Score=30.12 Aligned_cols=77 Identities=16% Similarity=0.203 Sum_probs=45.6
Q ss_pred CCCeEEEEcCCCCC----------hhhHHHHHHHHHHCCCEEEEeCC-CC--CCCCCCCCCCCCC----CHHHHHHHHHH
Q 025885 23 TGPAVLFIHGFPEL----------WYSWRNQLLYLSSRGYRAIAPDL-RG--YGDTDAPPSVTSY----TALHLVGDLIG 85 (247)
Q Consensus 23 ~~~~vvllHG~~~~----------~~~~~~~~~~l~~~g~~v~~~d~-~G--~G~s~~~~~~~~~----~~~~~~~~~~~ 85 (247)
++-+||+.|..... ...+..++..|.++||++|..|- .. .|....|...-.. ........+..
T Consensus 47 ~~~~VL~YH~V~d~~~~~~~~~Vspe~Fe~qL~~Lk~nGY~~ISl~el~~~~~g~~~LP~K~VaLTFDDGy~s~yt~A~P 126 (671)
T PRK14582 47 NGFVAIAYHDVEDEAADQRFMSVRTSALREQFAWLRENGYQPVSVAQILEAHRGGKPLPEKAVLLTFDDGYSSFYTRVFP 126 (671)
T ss_pred CceEEEEeCcccCCcccccccccCHHHHHHHHHHHHHCcCEEccHHHHHHHHhcCCCCCCCeEEEEEEcCCCchHHHHHH
Confidence 45789999998543 23588899999999999998862 11 1211111100000 11223345777
Q ss_pred HHHHhCCce-EEEEE
Q 025885 86 LLDKLGIHQ-VFLVG 99 (247)
Q Consensus 86 ~~~~l~~~~-~~lvG 99 (247)
+++..+.+- +.++|
T Consensus 127 ILkkygvpATfFlvg 141 (671)
T PRK14582 127 ILQAFQWPAVWAPVG 141 (671)
T ss_pred HHHHcCCCEEEEEec
Confidence 888888774 34454
No 328
>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase. The member of this family from Synechocystis PCC 6803, CcmA, was shown to be essential for carboxysome formation. However, no other candidate for this enzyme is present in that species, chorismate biosynthesis does occur, other species having this protein lack carboxysomes but appear to make chorismate, and a requirement of CcmA for carboxysome formation does not prohibit a role in chorismate biosynthesis.
Probab=23.51 E-value=4.3e+02 Score=21.95 Aligned_cols=73 Identities=19% Similarity=0.235 Sum_probs=46.4
Q ss_pred CCCeEEEEcCCCCChhhHHHHHHHHHHCCC-EEEEeCCCCCCCCCC-CCCCCCCCHHHHHHHHHHHHHHhCCceEEE-EE
Q 025885 23 TGPAVLFIHGFPELWYSWRNQLLYLSSRGY-RAIAPDLRGYGDTDA-PPSVTSYTALHLVGDLIGLLDKLGIHQVFL-VG 99 (247)
Q Consensus 23 ~~~~vvllHG~~~~~~~~~~~~~~l~~~g~-~v~~~d~~G~G~s~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l-vG 99 (247)
.+.||++--|...+...|...++.+.+.|- +++... +| .|.. +......+... +..+.+..+ -+|.+ .+
T Consensus 131 ~gkPVilk~G~~~t~~e~~~Ave~i~~~Gn~~i~l~~-rG--~s~y~~~~~~~~dl~~----i~~lk~~~~-~pV~~ds~ 202 (260)
T TIGR01361 131 QGKPVLLKRGMGNTIEEWLYAAEYILSSGNGNVILCE-RG--IRTFEKATRNTLDLSA----VPVLKKETH-LPIIVDPS 202 (260)
T ss_pred CCCcEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEE-CC--CCCCCCCCcCCcCHHH----HHHHHHhhC-CCEEEcCC
Confidence 478999999999999999999999988776 454433 33 3332 22112223332 333333344 36777 89
Q ss_pred echh
Q 025885 100 HDWG 103 (247)
Q Consensus 100 hS~G 103 (247)
||.|
T Consensus 203 Hs~G 206 (260)
T TIGR01361 203 HAAG 206 (260)
T ss_pred CCCC
Confidence 9988
No 329
>COG2185 Sbm Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) [Lipid metabolism]
Probab=23.49 E-value=3.3e+02 Score=20.55 Aligned_cols=38 Identities=24% Similarity=0.242 Sum_probs=24.1
Q ss_pred CCCCeEEE-EcCCCCChhhHHHHHHHHHHCCCEEEEeCC
Q 025885 22 GTGPAVLF-IHGFPELWYSWRNQLLYLSSRGYRAIAPDL 59 (247)
Q Consensus 22 g~~~~vvl-lHG~~~~~~~~~~~~~~l~~~g~~v~~~d~ 59 (247)
|.+|.|++ --|.-++...-.-+...|++.||.|+..-+
T Consensus 10 g~rprvlvak~GlDgHd~gakvia~~l~d~GfeVi~~g~ 48 (143)
T COG2185 10 GARPRVLVAKLGLDGHDRGAKVIARALADAGFEVINLGL 48 (143)
T ss_pred CCCceEEEeccCccccccchHHHHHHHHhCCceEEecCC
Confidence 55665554 446544444444566788889999987543
No 330
>PF02590 SPOUT_MTase: Predicted SPOUT methyltransferase; InterPro: IPR003742 This family of proteins are predicted to be SPOUT methyltransferases []. ; GO: 0008168 methyltransferase activity, 0006364 rRNA processing, 0005737 cytoplasm; PDB: 1VH0_E 4FAK_A 1TO0_G 1O6D_A 1NS5_B.
Probab=23.48 E-value=1.7e+02 Score=22.33 Aligned_cols=44 Identities=23% Similarity=0.297 Sum_probs=26.3
Q ss_pred CCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC-ceEEEEEechhH
Q 025885 50 RGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGI-HQVFLVGHDWGA 104 (247)
Q Consensus 50 ~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~lvGhS~Gg 104 (247)
.+-.+++.|-.|- ..+-.++++.+..+... |. +=+++||-+.|=
T Consensus 66 ~~~~~i~Ld~~Gk----------~~sS~~fA~~l~~~~~~-g~~~i~F~IGG~~G~ 110 (155)
T PF02590_consen 66 PNDYVILLDERGK----------QLSSEEFAKKLERWMNQ-GKSDIVFIIGGADGL 110 (155)
T ss_dssp TTSEEEEE-TTSE----------E--HHHHHHHHHHHHHT-TS-EEEEEE-BTTB-
T ss_pred CCCEEEEEcCCCc----------cCChHHHHHHHHHHHhc-CCceEEEEEecCCCC
Confidence 3677889998764 34556666666665554 43 346889988883
No 331
>PRK06696 uridine kinase; Validated
Probab=23.22 E-value=2.1e+02 Score=22.83 Aligned_cols=40 Identities=18% Similarity=0.195 Sum_probs=29.4
Q ss_pred CCCeEEEEcCCCCChhhH--HHHHHHHHHCCCEEEEeCCCCC
Q 025885 23 TGPAVLFIHGFPELWYSW--RNQLLYLSSRGYRAIAPDLRGY 62 (247)
Q Consensus 23 ~~~~vvllHG~~~~~~~~--~~~~~~l~~~g~~v~~~d~~G~ 62 (247)
.+|.||.+-|.++++.+. ..+...|.+.|..++...+-+|
T Consensus 20 ~~~~iI~I~G~sgsGKSTlA~~L~~~l~~~g~~v~~~~~Ddf 61 (223)
T PRK06696 20 TRPLRVAIDGITASGKTTFADELAEEIKKRGRPVIRASIDDF 61 (223)
T ss_pred CCceEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEeccccc
Confidence 468999999999998764 4566677666778877554444
No 332
>PF03490 Varsurf_PPLC: Variant-surface-glycoprotein phospholipase C; InterPro: IPR003633 Variant-surface-glycoprotein phospholipase C, by hydrolysis of the attached glycolipid, releases soluble variant surface glycoprotein containing phosphoinositol from the cell wall after lysis. It catalyses the conversion of variant-surface-glycoprotein 1,2 didecanoyl-SN-phosphatidylinositol and water to 1,2-didecanoylglycerol and the soluble variant-surface-glycoprotein. It also cleaves similar membrane anchors on some mammalian proteins.; GO: 0047396 glycosylphosphatidylinositol diacylglycerol-lyase activity, 0006650 glycerophospholipid metabolic process
Probab=22.80 E-value=98 Score=18.69 Aligned_cols=27 Identities=22% Similarity=0.489 Sum_probs=22.0
Q ss_pred CCCHHHHHHHHHHHHHHhCCceEEEEE
Q 025885 73 SYTALHLVGDLIGLLDKLGIHQVFLVG 99 (247)
Q Consensus 73 ~~~~~~~~~~~~~~~~~l~~~~~~lvG 99 (247)
..+.+.+..|+...+..+.+.++.++|
T Consensus 5 ~w~PqSWM~DLrS~I~~~~I~ql~ipG 31 (51)
T PF03490_consen 5 AWHPQSWMSDLRSSIGEMAITQLFIPG 31 (51)
T ss_pred ccCcHHHHHHHHHHHhcceeeeEEecc
Confidence 456677889999999988888888876
No 333
>COG0279 GmhA Phosphoheptose isomerase [Carbohydrate transport and metabolism]
Probab=22.43 E-value=1.7e+02 Score=22.83 Aligned_cols=74 Identities=14% Similarity=0.104 Sum_probs=47.5
Q ss_pred EEEcCCCCChhhHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC----CCCCCCHHHHHHHHHHHHHHhCCceEEEEEechh
Q 025885 28 LFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPP----SVTSYTALHLVGDLIGLLDKLGIHQVFLVGHDWG 103 (247)
Q Consensus 28 vllHG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~----~~~~~~~~~~~~~~~~~~~~l~~~~~~lvGhS~G 103 (247)
|++-|.+++.-+-.+++..|..+ |+--.|-+|.--.|.... -..+|..+.+ ....++.++.+-=+|+|.|--
T Consensus 44 vl~cGNGgSaadAqHfaael~gR-f~~eR~~lpaIaLt~dsS~lTai~NDy~yd~v---FsRqveA~g~~GDvLigISTS 119 (176)
T COG0279 44 VLACGNGGSAADAQHFAAELTGR-FEKERPSLPAIALSTDSSVLTAIANDYGYDEV---FSRQVEALGQPGDVLIGISTS 119 (176)
T ss_pred EEEECCCcchhhHHHHHHHHhhH-HHhcCCCCCeeEeecccHHHhhhhccccHHHH---HHHHHHhcCCCCCEEEEEeCC
Confidence 56678888888888888888765 666666666554442211 1124555543 445677777666678888877
Q ss_pred HH
Q 025885 104 AL 105 (247)
Q Consensus 104 g~ 105 (247)
|.
T Consensus 120 GN 121 (176)
T COG0279 120 GN 121 (176)
T ss_pred CC
Confidence 74
No 334
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=22.42 E-value=1.4e+02 Score=24.60 Aligned_cols=20 Identities=30% Similarity=0.238 Sum_probs=17.6
Q ss_pred EEEEechhHHHHHHHHHhCC
Q 025885 96 FLVGHDWGALIAWYFCLFRP 115 (247)
Q Consensus 96 ~lvGhS~Gg~~a~~~a~~~p 115 (247)
.+.|-|.|+.+|..++...+
T Consensus 33 ~i~GtSAGAl~aa~~a~g~~ 52 (245)
T cd07218 33 KISGASAGALAACCLLCDLP 52 (245)
T ss_pred eEEEEcHHHHHHHHHHhCCc
Confidence 49999999999999988755
No 335
>PF08902 DUF1848: Domain of unknown function (DUF1848); InterPro: IPR014998 This group of proteins are functionally uncharacterised. The C terminus contains a cluster of cysteines that are similar to the iron-sulphur cluster found at the N terminus of IPR007197 from INTERPRO.
Probab=22.37 E-value=4.7e+02 Score=21.98 Aligned_cols=66 Identities=21% Similarity=0.323 Sum_probs=44.5
Q ss_pred CeEEEEcCCCCChhhHHHHHHHHHHCCCEEE-EeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEE
Q 025885 25 PAVLFIHGFPELWYSWRNQLLYLSSRGYRAI-APDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVF 96 (247)
Q Consensus 25 ~~vvllHG~~~~~~~~~~~~~~l~~~g~~v~-~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 96 (247)
..|||--=.|. -+...++.|.+.||..+ -+.+-|||..-.|. -.+.++..+.+.++-+.+|.++|+
T Consensus 49 d~iVFWTKnp~---P~l~~L~~l~~~gy~~yfq~Tit~Y~~~lEp~---vP~~~~~i~~f~~Ls~~iG~~rVi 115 (266)
T PF08902_consen 49 DCIVFWTKNPA---PFLPYLDELDERGYPYYFQFTITGYGKDLEPN---VPPKDERIETFRELSERIGPERVI 115 (266)
T ss_pred eEEEEecCCcH---HHHhhHHHHHhCCCceEEEEEeCCCCccccCC---CCCHHHHHHHHHHHHHHHCCCcEE
Confidence 35666443332 34455667777788865 56888998774443 346778888899999999877543
No 336
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=22.33 E-value=2.9e+02 Score=21.09 Aligned_cols=49 Identities=14% Similarity=0.079 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHHh--CCceEEEEEechhHHHHHHHHHhCCCceeEEEEec
Q 025885 77 LHLVGDLIGLLDKL--GIHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMS 125 (247)
Q Consensus 77 ~~~~~~~~~~~~~l--~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv~~~ 125 (247)
+...+++.++++.+ ..++|.+.|-|..|...+.++...++.+..++=.+
T Consensus 51 ~~~~~~l~~~L~~~~~~gk~I~~yGA~~kg~tlln~~g~~~~~I~~vvD~n 101 (160)
T PF08484_consen 51 EQSKAELREFLEKLKAEGKRIAGYGAGAKGNTLLNYFGLDNDLIDYVVDDN 101 (160)
T ss_dssp HHHHHHHHHHHHHHHHTT--EEEE---SHHHHHHHHHT--TTTS--EEES-
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEECcchHHHHHHHHhCCCcceeEEEEeCC
Confidence 34444555565554 34679999999999998888877677777777554
No 337
>TIGR00959 ffh signal recognition particle protein. This model represents Ffh (Fifty-Four Homolog), the protein component that forms the bacterial (and organellar) signal recognition particle together with a 4.5S RNA. Ffh is a GTPase homologous to eukaryotic SRP54 and also to the GTPase FtsY (TIGR00064) that is the receptor for the signal recognition particle.
Probab=22.27 E-value=5.9e+02 Score=23.03 Aligned_cols=71 Identities=18% Similarity=0.185 Sum_probs=38.2
Q ss_pred HHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEechhHHHHHHHHHhCCC--ceeEE
Q 025885 44 LLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVFLVGHDWGALIAWYFCLFRPD--RVKAL 121 (247)
Q Consensus 44 ~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~--~v~~l 121 (247)
+..+...+|.++.+|.+|....+ ..+.+.+..+.+.+....+++|--++-|.-+...|..+-+ .+.++
T Consensus 175 l~~~~~~~~DvVIIDTaGr~~~d----------~~l~~eL~~i~~~~~p~e~lLVvda~tgq~~~~~a~~f~~~v~i~gi 244 (428)
T TIGR00959 175 LEYAKENGFDVVIVDTAGRLQID----------EELMEELAAIKEILNPDEILLVVDAMTGQDAVNTAKTFNERLGLTGV 244 (428)
T ss_pred HHHHHhcCCCEEEEeCCCccccC----------HHHHHHHHHHHHhhCCceEEEEEeccchHHHHHHHHHHHhhCCCCEE
Confidence 34444568999999998864211 2244445555555555555555555544444444443321 34555
Q ss_pred EEe
Q 025885 122 VNM 124 (247)
Q Consensus 122 v~~ 124 (247)
|+.
T Consensus 245 IlT 247 (428)
T TIGR00959 245 VLT 247 (428)
T ss_pred EEe
Confidence 543
No 338
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=22.12 E-value=1.9e+02 Score=19.32 Aligned_cols=25 Identities=20% Similarity=0.169 Sum_probs=19.2
Q ss_pred CCceEEEEEechhHHHHHHHHHhCC
Q 025885 91 GIHQVFLVGHDWGALIAWYFCLFRP 115 (247)
Q Consensus 91 ~~~~~~lvGhS~Gg~~a~~~a~~~p 115 (247)
+.+++.++|-|-|=.+|.+.++.+.
T Consensus 38 GpK~VLViGaStGyGLAsRIa~aFg 62 (78)
T PF12242_consen 38 GPKKVLVIGASTGYGLASRIAAAFG 62 (78)
T ss_dssp S-SEEEEES-SSHHHHHHHHHHHHC
T ss_pred CCceEEEEecCCcccHHHHHHHHhc
Confidence 5678999999999999988877654
No 339
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3. PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=21.99 E-value=1.5e+02 Score=24.59 Aligned_cols=22 Identities=27% Similarity=0.223 Sum_probs=18.7
Q ss_pred eEEEEEechhHHHHHHHHHhCC
Q 025885 94 QVFLVGHDWGALIAWYFCLFRP 115 (247)
Q Consensus 94 ~~~lvGhS~Gg~~a~~~a~~~p 115 (247)
.-.++|-|.|+.++..++...+
T Consensus 33 ~~~i~GtSAGAl~aa~~asg~~ 54 (252)
T cd07221 33 ARMFFGASAGALHCVTFLSGLP 54 (252)
T ss_pred CCEEEEEcHHHHHHHHHHhCCC
Confidence 3469999999999999988765
No 340
>KOG2872 consensus Uroporphyrinogen decarboxylase [Coenzyme transport and metabolism]
Probab=21.86 E-value=4.1e+02 Score=22.83 Aligned_cols=69 Identities=22% Similarity=0.346 Sum_probs=41.1
Q ss_pred CeEEEEcCCCCChhhHHHHHHHHHHCCCEEEEeCCCC--------CCCC-----CCCCCCCCCCHHHHHHHHHHHHHHhC
Q 025885 25 PAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRG--------YGDT-----DAPPSVTSYTALHLVGDLIGLLDKLG 91 (247)
Q Consensus 25 ~~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G--------~G~s-----~~~~~~~~~~~~~~~~~~~~~~~~l~ 91 (247)
|-|+|.-|.+ ..++.++..||.|+..|+-- .|.. .-.+..-..+.+.+.+.+.+.++..|
T Consensus 253 Pmi~fakG~g-------~~Le~l~~tG~DVvgLDWTvdp~ear~~~g~~VtlQGNlDP~~ly~s~e~it~~v~~mv~~fG 325 (359)
T KOG2872|consen 253 PMILFAKGSG-------GALEELAQTGYDVVGLDWTVDPAEARRRVGNRVTLQGNLDPGVLYGSKEEITQLVKQMVKDFG 325 (359)
T ss_pred ceEEEEcCcc-------hHHHHHHhcCCcEEeecccccHHHHHHhhCCceEEecCCChHHhcCCHHHHHHHHHHHHHHhC
Confidence 6678888754 45677888999999999731 1111 00011112245666677788888888
Q ss_pred CceE-EEEEe
Q 025885 92 IHQV-FLVGH 100 (247)
Q Consensus 92 ~~~~-~lvGh 100 (247)
.++. .=.||
T Consensus 326 ~~ryI~NLGH 335 (359)
T KOG2872|consen 326 KSRYIANLGH 335 (359)
T ss_pred ccceEEecCC
Confidence 5543 33454
No 341
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=21.17 E-value=1.3e+02 Score=24.66 Aligned_cols=35 Identities=23% Similarity=0.338 Sum_probs=23.3
Q ss_pred HHHHHHHhCCc---eE-EEEEechhHHHHHHHHHhCCCce
Q 025885 83 LIGLLDKLGIH---QV-FLVGHDWGALIAWYFCLFRPDRV 118 (247)
Q Consensus 83 ~~~~~~~l~~~---~~-~lvGhS~Gg~~a~~~a~~~p~~v 118 (247)
+.+.+.+.+++ ++ .++|-|.|+.++..++. .|+++
T Consensus 17 Vl~~L~e~g~~l~~~~~~i~GtSaGAl~aa~~a~-~~~~~ 55 (246)
T cd07222 17 AAKALLRHGKKLLKRVKRFAGASAGSLVAAVLLT-APEKI 55 (246)
T ss_pred HHHHHHHcCchhhccCCEEEEECHHHHHHHHHhc-ChHHH
Confidence 33344444543 33 79999999999999984 45443
No 342
>TIGR00176 mobB molybdopterin-guanine dinucleotide biosynthesis protein MobB. This molybdenum cofactor biosynthesis enzyme is similar to the urease accessory protein UreG and to the hydrogenase accessory protein HypB, both GTP hydrolases involved in loading nickel into the metallocenters of their respective target enzymes.
Probab=21.13 E-value=1.8e+02 Score=21.90 Aligned_cols=37 Identities=24% Similarity=0.159 Sum_probs=27.9
Q ss_pred EEEEcCCCCChhhH--HHHHHHHHHCCCEEEEeCCCCCC
Q 025885 27 VLFIHGFPELWYSW--RNQLLYLSSRGYRAIAPDLRGYG 63 (247)
Q Consensus 27 vvllHG~~~~~~~~--~~~~~~l~~~g~~v~~~d~~G~G 63 (247)
|+.+-|..++..+. ..++..|.++|++|.++..-+++
T Consensus 1 vi~i~G~~gsGKTtl~~~l~~~l~~~G~~V~viK~~~~~ 39 (155)
T TIGR00176 1 VLQIVGPKNSGKTTLIERLVKALKARGYRVATIKHDHHD 39 (155)
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHhcCCeEEEEeccccc
Confidence 35566888887664 67788888889999998866554
No 343
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=21.00 E-value=1.9e+02 Score=24.84 Aligned_cols=19 Identities=16% Similarity=0.319 Sum_probs=16.5
Q ss_pred EEEEechhHHHHHHHHHhC
Q 025885 96 FLVGHDWGALIAWYFCLFR 114 (247)
Q Consensus 96 ~lvGhS~Gg~~a~~~a~~~ 114 (247)
.+.|-|.||.+|..++...
T Consensus 35 ~i~GTStGgiIA~~la~g~ 53 (312)
T cd07212 35 WIAGTSTGGILALALLHGK 53 (312)
T ss_pred EEEeeChHHHHHHHHHcCC
Confidence 6899999999999998643
No 344
>PF01656 CbiA: CobQ/CobB/MinD/ParA nucleotide binding domain; InterPro: IPR002586 This entry consists of various cobyrinic acid a,c-diamide synthases. These include CbiA and CbiP from Salmonella typhimurium []., and CobQ from Rhodobacter capsulatus []. These amidases catalyse amidations to various side chains of hydrogenobyrinic acid or cobyrinic acid a,c-diamide in the biosynthesis of cobalamin (vitamin B12) from uroporphyrinogen III. Vitamin B12 is an important cofactor and an essential nutrient for many plants and animals and is primarily produced by bacteria [].; PDB: 3K9G_A 3K9H_B 3EZ9_B 3EZF_A 3EZ2_B 3EZ6_A 3EZ7_A 1G3Q_A 1G3R_A 1DTS_A ....
Probab=20.78 E-value=1.4e+02 Score=22.73 Aligned_cols=34 Identities=18% Similarity=0.099 Sum_probs=22.6
Q ss_pred EEEcCCCCChhh--HHHHHHHHHHCCCEEEEeCCCC
Q 025885 28 LFIHGFPELWYS--WRNQLLYLSSRGYRAIAPDLRG 61 (247)
Q Consensus 28 vllHG~~~~~~~--~~~~~~~l~~~g~~v~~~d~~G 61 (247)
.+..+-+|.+.+ -..++..|+++|++|+++|+--
T Consensus 2 ~v~~~kGG~GKTt~a~~la~~la~~g~~VlliD~D~ 37 (195)
T PF01656_consen 2 AVTSGKGGVGKTTIAANLAQALARKGKKVLLIDLDP 37 (195)
T ss_dssp EEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEEEST
T ss_pred EEEcCCCCccHHHHHHHHHhccccccccccccccCc
Confidence 344544555443 3567888888999999999843
No 345
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=20.50 E-value=74 Score=27.90 Aligned_cols=85 Identities=11% Similarity=0.125 Sum_probs=47.5
Q ss_pred CeEEEEcCCCCC-------hhhHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEE
Q 025885 25 PAVLFIHGFPEL-------WYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHLVGDLIGLLDKLGIHQVFL 97 (247)
Q Consensus 25 ~~vvllHG~~~~-------~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 97 (247)
-.+|++|.-..+ .+.|..+...+.++ -.+-.+|+-..|..+...+ .-+..+.-+++. ..-++
T Consensus 198 gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k-~~~pffDmAYQGfaSG~~d-------~DA~avR~F~~~---g~~~~ 266 (427)
T KOG1411|consen 198 GSIILLHACAHNPTGVDPTKEQWEKISDLIKEK-NLLPFFDMAYQGFASGDLD-------KDAQAVRLFVED---GHEIL 266 (427)
T ss_pred CcEEEeehhhcCCCCCCccHHHHHHHHHHhhhc-cccchhhhhhcccccCCch-------hhHHHHHHHHHc---CCceE
Confidence 358999976544 45899988888775 3444567766665544321 112223333332 22345
Q ss_pred EEechhHHHHHHHHHhCCCceeEEEEec
Q 025885 98 VGHDWGALIAWYFCLFRPDRVKALVNMS 125 (247)
Q Consensus 98 vGhS~Gg~~a~~~a~~~p~~v~~lv~~~ 125 (247)
+..|+.-.+. .+.|||.++-++|
T Consensus 267 laQSyAKNMG-----LYgERvGa~svvc 289 (427)
T KOG1411|consen 267 LAQSYAKNMG-----LYGERVGALSVVC 289 (427)
T ss_pred eehhhhhhcc-----hhhhccceeEEEe
Confidence 5555443332 3567888876665
No 346
>PRK01261 aroD 3-dehydroquinate dehydratase; Provisional
Probab=20.42 E-value=1.9e+02 Score=23.58 Aligned_cols=29 Identities=24% Similarity=0.063 Sum_probs=15.0
Q ss_pred HHHHHHHHHHHHHHhCCceEEEEEechhH
Q 025885 76 ALHLVGDLIGLLDKLGIHQVFLVGHDWGA 104 (247)
Q Consensus 76 ~~~~~~~~~~~~~~l~~~~~~lvGhS~Gg 104 (247)
..+...++..........+.-+++-|||-
T Consensus 158 ~~Dvl~~l~~~~~~~~~~~~p~i~isMG~ 186 (229)
T PRK01261 158 NKKFVDDLQYILMKKDEKYKPIVFIPMGR 186 (229)
T ss_pred hHHHHHHHHHHHHHHhcCCCCEEEEECCc
Confidence 34444455444444322334456778888
No 347
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=20.34 E-value=1.6e+02 Score=24.44 Aligned_cols=21 Identities=24% Similarity=-0.020 Sum_probs=18.2
Q ss_pred EEEEEechhHHHHHHHHHhCC
Q 025885 95 VFLVGHDWGALIAWYFCLFRP 115 (247)
Q Consensus 95 ~~lvGhS~Gg~~a~~~a~~~p 115 (247)
-.++|-|.|+.++..++...+
T Consensus 38 ~~i~G~SAGAl~aa~~a~g~~ 58 (249)
T cd07220 38 RKIYGASAGALTATALVTGVC 58 (249)
T ss_pred CeEEEEcHHHHHHHHHHcCCC
Confidence 568999999999999988765
No 348
>PF01580 FtsK_SpoIIIE: FtsK/SpoIIIE family; InterPro: IPR002543 The FtsK/SpoIIIE domain is found extensively in a wide variety of proteins from prokaryotes and plasmids [] some of which contain up to three copies.The domain contains a putative ATP binding P-loop motif. A mutation in FtsK causes a temperature sensitive block in cell division and it is involved in peptidoglycan synthesis or modification []. The SpoIIIE protein is implicated in intercellular chromosomal DNA transfer []. ; GO: 0000166 nucleotide binding, 0003677 DNA binding, 0005524 ATP binding, 0007049 cell cycle, 0007059 chromosome segregation, 0051301 cell division, 0016021 integral to membrane; PDB: 2IUS_E 2IUU_A 2IUT_A.
Probab=20.16 E-value=3e+02 Score=21.43 Aligned_cols=38 Identities=26% Similarity=0.132 Sum_probs=23.1
Q ss_pred EEEEcCCCCChhhH--HHHHHHHHH----CCCEEEEeCCCCCCC
Q 025885 27 VLFIHGFPELWYSW--RNQLLYLSS----RGYRAIAPDLRGYGD 64 (247)
Q Consensus 27 vvllHG~~~~~~~~--~~~~~~l~~----~g~~v~~~d~~G~G~ 64 (247)
=+++-|-++++.+. +.++..+.. ...+++.+|..|...
T Consensus 40 h~li~G~tgsGKS~~l~~ll~~l~~~~~p~~~~l~iiD~k~~~l 83 (205)
T PF01580_consen 40 HLLIAGATGSGKSTLLRTLLLSLALTYSPDDVQLYIIDPKGSDL 83 (205)
T ss_dssp SEEEE--TTSSHHHHHHHHHHHHHTT--TTTEEEEEE-TTSSCC
T ss_pred eEEEEcCCCCCccHHHHHHHHHHHHHhcCCccEEEEEcCCcccc
Confidence 45666777776543 445566655 578999999987643
Done!