Citrus Sinensis ID: 025886


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------
MLDGGEYSPAAEPYSCMNEITTTTTTRKKKCKNKRRFSDEQIRSLELMFENETRLEPRKKLQLAKELGLQPRQVAIWFQNKRARWKSKQLERDYNILQANFNNLASRFEALKKEKQALVIQLQKTNELLQNKPRREDQSPSERQCCGQVEGVNSMESELDNGDRDTNKCESEVKPSLSAELRLGVLSDDDSSIKTEYFGLHEDEPNLMTMVEPAESSMTSPEDWGNFESDGLFDQSSSEYQWWDFWS
ccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcccccHHHHHHHHHHcccccccHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
***************************************EQIRSLELMFENETRLEPRKKLQLAKELGLQPRQVAIWFQNKRARWKSKQLERDYNILQANFNNLASRFEALKKEKQALVIQL****************************************************************************************************************QSSSEYQWWDFWS
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MLDGGEYSPAAEPYSCMNEITTTTTTRKKKCKNKRRFSDEQIRSLELMFENETRLEPRKKLQLAKELGLQPRQVAIWFQxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxPRREDQSPSERQCCGQVEGVNSMESELDNGDRDTNKCESEVKPSLSAELRLGVLSDDDSSIKTEYFGLHEDEPNLMTMVEPAESSMTSPEDWGNFESDGLFDQSSSEYQWWDFWS

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Homeobox-leucine zipper protein ATHB-7 Probable transcription activator that may act as growth regulators in response to water deficit.probableP46897

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 2DMT, chain A
Confidence level:very confident
Coverage over the Query: 26-89
View the alignment between query and template
View the model in PyMOL
Template: 1HJB, chain A
Confidence level:probable
Coverage over the Query: 82-131
View the alignment between query and template
View the model in PyMOL