Your job contains 1 sequence.
>025888
MDPFRSNSLNFSTFFLMFYALYVFAYFVVFRGWPKHRAEASSCFISLAHGTPAVLLSSHA
AIRSTQTTFASPNTTLQDIVLEFSMAYFLMDLLHYIIFTPRDILFILHHAATLYVFVTCR
YVVHYGAFELLILLILAEITSPCQNVWSLSSFWKADVPASARLHDLLSAPFYTFYSVVRG
ILGPLFVYKLWLFYISGAADNLIPIWAWLSWMVVITSAILLSLLWVLSNWIGWYRNLGYS
AGKKVI
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 025888
(246 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2092075 - symbol:AT3G25950 "AT3G25950" species... 676 1.7e-66 1
TAIR|locus:2145688 - symbol:AT5G14280 species:3702 "Arabi... 630 1.3e-61 1
TAIR|locus:2086508 - symbol:AT3G27270 "AT3G27270" species... 533 2.4e-51 1
UNIPROTKB|E1C635 - symbol:TMEM136 "Uncharacterized protei... 141 5.9e-08 1
UNIPROTKB|F1NUQ1 - symbol:TMEM136 "Uncharacterized protei... 141 6.3e-08 1
UNIPROTKB|F1P1X2 - symbol:TMEM136 "Uncharacterized protei... 113 2.0e-06 1
UNIPROTKB|E2RSK2 - symbol:TMEM56 "Uncharacterized protein... 117 7.4e-05 1
UNIPROTKB|E2QSX2 - symbol:TMEM136 "Uncharacterized protei... 115 0.00011 1
UNIPROTKB|F6UPA7 - symbol:TMEM136 "Uncharacterized protei... 115 0.00013 1
UNIPROTKB|Q0VD42 - symbol:TMEM136 "Transmembrane protein ... 113 0.00018 1
UNIPROTKB|Q6ZRR5 - symbol:TMEM136 "Transmembrane protein ... 113 0.00018 1
RGD|1565079 - symbol:Tmem136 "transmembrane protein 136" ... 113 0.00018 1
MGI|MGI:2685030 - symbol:Tmem136 "transmembrane protein 1... 110 0.00041 1
>TAIR|locus:2092075 [details] [associations]
symbol:AT3G25950 "AT3G25950" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=ISM] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR006634 PROSITE:PS50922 SMART:SM00724 GO:GO:0016021
EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AY600580 EMBL:AY649313
IPI:IPI00542333 RefSeq:NP_189224.1 UniGene:At.50845
UniGene:At.74246 EnsemblPlants:AT3G25950.1 GeneID:822192
KEGG:ath:AT3G25950 TAIR:At3g25950 eggNOG:NOG258072
InParanoid:Q6DR02 OMA:TSACQNV PhylomeDB:Q6DR02
ProtClustDB:CLSN2706803 ArrayExpress:Q6DR02 Genevestigator:Q6DR02
Uniprot:Q6DR02
Length = 251
Score = 676 (243.0 bits), Expect = 1.7e-66, P = 1.7e-66
Identities = 123/228 (53%), Positives = 163/228 (71%)
Query: 11 FSTFFLMFYALYVFAYFVVFRGWPKHRAEASSCFISLAHGTPAVLLSSHAAI---RSTQT 67
F +F L+F A+Y YF+VFR W + +SC +SL HGTPAV+++SHA + R+
Sbjct: 15 FPSFLLLFLAVYTIGYFLVFRTWKQSSHLGASCLMSLFHGTPAVIMASHALLTTPRADVH 74
Query: 68 TFASPNTTLQDIVLEFSMAYFLMDLLHYIIFTPRDILFILHHAATLYVFVTCRYVVHYGA 127
+FASPNT ++ VL+FSMAYF +DLLHY+IF P D +FILHH ATLYVF TCR+ V +GA
Sbjct: 75 SFASPNTAVESNVLDFSMAYFTVDLLHYLIFLPNDFIFILHHIATLYVFATCRFAVGHGA 134
Query: 128 FEXXXXXXXAEITSPCQNVWSLSSFWKADVPASARLHDLLSAPFYTFYSVVRGILGPLFV 187
AE TS CQNVW+++ + K DV + R+ +LLS PFY FY+VVRG+ GP+ +
Sbjct: 135 HGLLLLLILAEATSACQNVWTITGYRKNDVALARRVRELLSPPFYLFYTVVRGLAGPVVL 194
Query: 188 YKLWLFYISGAADNLIPIWAWLSWMVVITSAILLSLLWVLSNWIGWYR 235
Y + FY SGAAD ++P WAWLSW+VVI AIL+S+LWVL NW+ W+R
Sbjct: 195 YDMATFYGSGAADGVVPRWAWLSWLVVIGFAILVSILWVLRNWLDWFR 242
>TAIR|locus:2145688 [details] [associations]
symbol:AT5G14280 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] InterPro:IPR006634 Pfam:PF03798
PROSITE:PS50922 SMART:SM00724 GO:GO:0016021 EMBL:CP002688
GO:GO:0006355 GO:GO:0003677 EMBL:AL163817 InterPro:IPR007592
Pfam:PF04504 IPI:IPI00522188 PIR:T48601 RefSeq:NP_196932.1
UniGene:At.43713 PRIDE:Q9LYA1 EnsemblPlants:AT5G14280.1
GeneID:831278 KEGG:ath:AT5G14280 TAIR:At5g14280
HOGENOM:HOG000153170 InParanoid:Q9LYA1 OMA:ISMSINI
ProtClustDB:CLSN2916706 Genevestigator:Q9LYA1 Uniprot:Q9LYA1
Length = 572
Score = 630 (226.8 bits), Expect = 1.3e-61, P = 1.3e-61
Identities = 115/221 (52%), Positives = 155/221 (70%)
Query: 14 FFLMFYALYVFAYFVVFRGW-PKHRAEASSCFISLAHGTPAVLLSSHAAIRSTQTTFASP 72
FF MF +Y+ AYF+VFR W P+ R EASSC IS+ HG+PAV L++ A S++ +FAS
Sbjct: 334 FFSMFLTIYLIAYFIVFRNWKPQIRPEASSCLISIFHGSPAVFLATRAVFSSSERSFASA 393
Query: 73 NTTLQDIVLEFSMAYFLMDLLHYIIFTPRDILFILHHAATLYVFVTCRYVVHYGAFEXXX 132
NT Q+ VL+FS+AYFL DL HYI+F P D+LFI HH ATL+VF+TCR++V +GA
Sbjct: 394 NTAAQNTVLDFSVAYFLTDLFHYIVFNPNDVLFIGHHVATLFVFLTCRFLVFHGACAILG 453
Query: 133 XXXXAEITSPCQNVWSLSSFWKADVPA--SARLHDLLSAPFYTFYSVVRGILGPLFVYKL 190
AE+TS CQN W+L+ K D + + +++DLLS PFY FYS+VRG+LGPLF K+
Sbjct: 454 LLILAEVTSACQNAWTLAGARKNDPESRLAVKVYDLLSPPFYAFYSIVRGVLGPLFFGKM 513
Query: 191 WLFYISGAADNLIPIWAWLSWMVVITSAILLSLLWVLSNWI 231
FY G A +IP W W+SW +V+ AI +S+LW+ + WI
Sbjct: 514 VAFYARGGAHGVIPNWLWISWAIVVGIAITVSILWIWNLWI 554
>TAIR|locus:2086508 [details] [associations]
symbol:AT3G27270 "AT3G27270" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR006634 Pfam:PF03798
PROSITE:PS50922 SMART:SM00724 GO:GO:0016021 EMBL:CP002686
EMBL:AP000381 ProtClustDB:CLSN2706803 EMBL:BT014791 EMBL:BT015695
IPI:IPI00538220 RefSeq:NP_189363.1 UniGene:At.43924 PRIDE:Q9LK26
EnsemblPlants:AT3G27270.1 GeneID:822346 KEGG:ath:AT3G27270
TAIR:At3g27270 HOGENOM:HOG000241337 InParanoid:Q9LK26 OMA:QNTWTLA
PhylomeDB:Q9LK26 Genevestigator:Q9LK26 Uniprot:Q9LK26
Length = 249
Score = 533 (192.7 bits), Expect = 2.4e-51, P = 2.4e-51
Identities = 105/249 (42%), Positives = 152/249 (61%)
Query: 1 MDPFRSNSLNFSTFFLMFYALYVFAYFVVFRGW-PKHRAEASSCFISLAHGTPAVLLSSH 59
M+P + S + FF +F +Y+ Y +F+ W P+ R ASSC ISL HG AV+L+++
Sbjct: 1 MEPI-TYSKDLPLFFSIFIFVYLLGYLFIFKKWTPETRPLASSCLISLLHGVSAVVLATN 59
Query: 60 AAIRSTQTTFASPNTTLQDIVLEFSMAYFLMDLLHYIIF-TPR--DILFILHHAATLYVF 116
A + F+S NT Q+ +L+FS AYFL DL+H +F +P D LF HH A L+VF
Sbjct: 60 ALLSDPNRGFSSVNTQSQNSILDFSSAYFLADLVHLAVFPSPAGGDSLFAAHHLAVLFVF 119
Query: 117 VTCRYVVHYGAFEXXXXXXXAEITSPCQNVWSLSSFWKADVPASARLHDLLSAPFYTFYS 176
+TCRY+V +GA AE TS CQN W+L+ D P + LH ++ PFY YS
Sbjct: 120 LTCRYMVAHGACALLALLVVAEATSACQNTWTLADARGKDAPLAVSLHRFVTVPFYASYS 179
Query: 177 VVRGILGPLFVYKLWLFYISGAADNLIPIWAWLSWMVVITSAILLSLLWVLSNWIGWYRN 236
V R +L PL + K+ FY+SG AD++IP W W+SW VVI +A+ +S+LW+ + W+ +++
Sbjct: 180 VCRCVLAPLLIVKMTWFYVSGGADDVIPRWVWVSWTVVIVTAVTVSILWIWNLWVLFFQE 239
Query: 237 LGYSAGKKV 245
KKV
Sbjct: 240 RYSKFTKKV 248
>UNIPROTKB|E1C635 [details] [associations]
symbol:TMEM136 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR006634 Pfam:PF03798 PROSITE:PS50922 SMART:SM00724
GO:GO:0016021 GeneTree:ENSGT00390000008162 EMBL:AADN02041864
IPI:IPI00822475 Ensembl:ENSGALT00000040848 Uniprot:E1C635
Length = 242
Score = 141 (54.7 bits), Expect = 5.9e-08, P = 5.9e-08
Identities = 42/130 (32%), Positives = 61/130 (46%)
Query: 27 FVVFRGWPKHRAEASSC-FISLAHGTPAVLLSSHAAIRSTQTTFA---SPNTTLQDIVLE 82
+ F W +HR+ +C ++L HG A LS + A+ + SPNT LQ VL
Sbjct: 19 YAAFCLWNRHRSPEWNCRLVTLLHGATATCLSGYIALWDGPWPLSHAGSPNTALQVHVLS 78
Query: 83 FSMAYFLMDLLHYIIFTPRDILFILHHAATLYVFVTCRYVVHYG--AFEXXXXXXXAEIT 140
++ YF+ DLL + F L +LHH ++ V V+ G A E +EIT
Sbjct: 79 LTLGYFIFDLLWCLYFQTEGDLMLLHHTLSICGMVL---VLGLGKSATEVNAVVFVSEIT 135
Query: 141 SPC-QNVWSL 149
+P Q W L
Sbjct: 136 NPLLQTRWFL 145
>UNIPROTKB|F1NUQ1 [details] [associations]
symbol:TMEM136 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR006634 Pfam:PF03798 PROSITE:PS50922 SMART:SM00724
GO:GO:0016021 GeneTree:ENSGT00390000008162 OMA:HAGTENT
EMBL:AADN02041864 IPI:IPI00822056 Ensembl:ENSGALT00000040846
Uniprot:F1NUQ1
Length = 245
Score = 141 (54.7 bits), Expect = 6.3e-08, P = 6.3e-08
Identities = 42/130 (32%), Positives = 61/130 (46%)
Query: 27 FVVFRGWPKHRAEASSC-FISLAHGTPAVLLSSHAAIRSTQTTFA---SPNTTLQDIVLE 82
+ F W +HR+ +C ++L HG A LS + A+ + SPNT LQ VL
Sbjct: 20 YAAFCLWNRHRSPEWNCRLVTLLHGATATCLSGYIALWDGPWPLSHAGSPNTALQVHVLS 79
Query: 83 FSMAYFLMDLLHYIIFTPRDILFILHHAATLYVFVTCRYVVHYG--AFEXXXXXXXAEIT 140
++ YF+ DLL + F L +LHH ++ V V+ G A E +EIT
Sbjct: 80 LTLGYFIFDLLWCLYFQTEGDLMLLHHTLSICGMVL---VLGLGKSATEVNAVVFVSEIT 136
Query: 141 SPC-QNVWSL 149
+P Q W L
Sbjct: 137 NPLLQTRWFL 146
>UNIPROTKB|F1P1X2 [details] [associations]
symbol:TMEM136 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR006634 Pfam:PF03798 PROSITE:PS50922 GO:GO:0016021
GeneTree:ENSGT00390000008162 EMBL:AADN02041864 IPI:IPI00595634
Ensembl:ENSGALT00000010786 Uniprot:F1P1X2
Length = 148
Score = 113 (44.8 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 30/87 (34%), Positives = 44/87 (50%)
Query: 27 FVVFRGWPKHRAEASSC-FISLAHGTPAVLLSSHAAIRSTQTTFA---SPNTTLQDIVLE 82
+ F W +HR+ +C ++L HG A LS + A+ + SPNT LQ VL
Sbjct: 41 YAAFCLWNRHRSPEWNCRLVTLLHGATATCLSGYIALWDGPWPLSHAGSPNTALQVHVLS 100
Query: 83 FSMAYFLMDLLHYIIF-TPRDILFILH 108
++ YF+ DLL + F T R +L H
Sbjct: 101 LTLGYFIFDLLWCLYFQTERKMLKKYH 127
>UNIPROTKB|E2RSK2 [details] [associations]
symbol:TMEM56 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR006634 Pfam:PF03798 PROSITE:PS50922 SMART:SM00724
GO:GO:0016021 GeneTree:ENSGT00510000047701 CTD:148534 OMA:EKKIEWN
EMBL:AAEX03004799 RefSeq:XP_547272.2 Ensembl:ENSCAFT00000031990
GeneID:490151 KEGG:cfa:490151 NextBio:20863243 Uniprot:E2RSK2
Length = 263
Score = 117 (46.2 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 58/232 (25%), Positives = 97/232 (41%)
Query: 10 NFSTFFLMFYALYVFAYFVVFRGWP----KHRAEASSCFISLAHGTPAVLLSSHAAIRST 65
+F TF L+FY + + V G+ + + E +S +S H L +
Sbjct: 15 SFFTFQLLFYFISFWFSAKVSPGFVSLSFEKKIEWNSRVVSTCHSLVVGLFGLYLFFFD- 73
Query: 66 QTTFASP---NTTLQDIVLEFSMAYFLMDLLHYIIFTP--RDILFILHHAATLYVFVTCR 120
+ T A P +++L + + + Y + DLL I++ D FI+HH A LY +
Sbjct: 74 EATMADPLWGDSSLVKVNISIATGYLISDLLILILYWKVIGDKYFIIHHCAALYAYY--- 130
Query: 121 YVVHYGAFEXXXXXXX-AEITSPCQNV-WSLSS-----FWKADVPASARLHDLLS----A 169
YV+ YG AE++SP N W + F KA+V + + A
Sbjct: 131 YVLRYGVLASIGNFRLLAELSSPFVNQRWFFEALKYPKFSKANVINGILMTVVFFIVRIA 190
Query: 170 PFYTFYSVVRGILGPLFVYKL-WLFYISGAADNLIPIWAWLSWMVVITSAIL 220
P FYS + +LG +L +L S + ++ + WM+ IT +
Sbjct: 191 PIPPFYSYMYSVLGTEAYIRLGFLIQCSWISTCVVLDIMNVMWMIKITKGCI 242
Score = 114 (45.2 bits), Expect = 0.00017, P = 0.00017
Identities = 52/239 (21%), Positives = 102/239 (42%)
Query: 12 STFFLMFYALYVFAYFVVFRGWPKHRAEASSCFISLA-----HGTPAVLLSSHAAIRST- 65
ST F F+ + YF+ F W A+ S F+SL+ V+ + H+ +
Sbjct: 10 STVFTSFFTFQLLFYFISF--W--FSAKVSPGFVSLSFEKKIEWNSRVVSTCHSLVVGLF 65
Query: 66 --------QTTFASP---NTTLQDIVLEFSMAYFLMDLLHYIIFTP--RDILFILHHAAT 112
+ T A P +++L + + + Y + DLL I++ D FI+HH A
Sbjct: 66 GLYLFFFDEATMADPLWGDSSLVKVNISIATGYLISDLLILILYWKVIGDKYFIIHHCAA 125
Query: 113 LYVFVTCRYVVHYGAFEXXXXXXX-AEITSPCQNV-WSLSSFWKA-DVPASARLHDLLSA 169
LY + YV+ YG AE++SP N W F++A P ++ + +
Sbjct: 126 LYAYY---YVLRYGVLASIGNFRLLAELSSPFVNQRW----FFEALKYPKFSKANVINGI 178
Query: 170 PFYTFYSVVRGILGPLFVYKLWLFYISGAADNL-IPIWAWLSWMVVITSAILLSLLWVL 227
+ +VR + P+ + +++ + G + + SW+ +++++W++
Sbjct: 179 LMTVVFFIVR--IAPIPPFYSYMYSVLGTEAYIRLGFLIQCSWISTCVVLDIMNVMWMI 235
>UNIPROTKB|E2QSX2 [details] [associations]
symbol:TMEM136 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR006634 Pfam:PF03798 PROSITE:PS50922
SMART:SM00724 GO:GO:0016021 GeneTree:ENSGT00390000008162
EMBL:AAEX03003424 Ensembl:ENSCAFT00000018997
Ensembl:ENSCAFT00000045263 Uniprot:E2QSX2
Length = 245
Score = 115 (45.5 bits), Expect = 0.00011, P = 0.00011
Identities = 37/128 (28%), Positives = 56/128 (43%)
Query: 27 FVVFRGWPKHRAEASSC-FISLAHGTPAVLLSSHAAIRSTQTTFA---SPNTTLQDIVLE 82
++ F KHR+ SC ++ HG ++ LS++ F SPNT LQ VL
Sbjct: 20 YISFCRLNKHRSYEWSCRLVTFTHGILSIGLSAYIGFIDGPWPFTHPGSPNTPLQVHVLC 79
Query: 83 FSMAYFLMDLLHYIIFTPRDILFILHHAATLYVFVTCRYVVHYGAFEXXXXXXXAEITSP 142
++ YF+ DL I F L + HH ++ + + G E +EIT+P
Sbjct: 80 LTLGYFIFDLGWCIYFQSEGALMLAHHTLSILGIIMALVLGESGT-EVNAVLFGSEITNP 138
Query: 143 C-QNVWSL 149
Q W L
Sbjct: 139 LLQMRWFL 146
>UNIPROTKB|F6UPA7 [details] [associations]
symbol:TMEM136 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR006634 Pfam:PF03798 PROSITE:PS50922
SMART:SM00724 GO:GO:0016021 GeneTree:ENSGT00390000008162
OMA:LMLAHHT EMBL:AAEX03003424 Ensembl:ENSCAFT00000018997
Uniprot:F6UPA7
Length = 266
Score = 115 (45.5 bits), Expect = 0.00013, P = 0.00013
Identities = 37/128 (28%), Positives = 56/128 (43%)
Query: 27 FVVFRGWPKHRAEASSC-FISLAHGTPAVLLSSHAAIRSTQTTFA---SPNTTLQDIVLE 82
++ F KHR+ SC ++ HG ++ LS++ F SPNT LQ VL
Sbjct: 41 YISFCRLNKHRSYEWSCRLVTFTHGILSIGLSAYIGFIDGPWPFTHPGSPNTPLQVHVLC 100
Query: 83 FSMAYFLMDLLHYIIFTPRDILFILHHAATLYVFVTCRYVVHYGAFEXXXXXXXAEITSP 142
++ YF+ DL I F L + HH ++ + + G E +EIT+P
Sbjct: 101 LTLGYFIFDLGWCIYFQSEGALMLAHHTLSILGIIMALVLGESGT-EVNAVLFGSEITNP 159
Query: 143 C-QNVWSL 149
Q W L
Sbjct: 160 LLQMRWFL 167
>UNIPROTKB|Q0VD42 [details] [associations]
symbol:TMEM136 "Transmembrane protein 136" species:9913
"Bos taurus" [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR006634 Pfam:PF03798 PROSITE:PS50922 SMART:SM00724
GO:GO:0016021 EMBL:BC119842 IPI:IPI00688829 RefSeq:NP_001069274.1
UniGene:Bt.27453 Ensembl:ENSBTAT00000040031 GeneID:520468
KEGG:bta:520468 CTD:219902 eggNOG:NOG286009
GeneTree:ENSGT00390000008162 HOGENOM:HOG000007565
HOVERGEN:HBG107117 InParanoid:Q0VD42 OMA:LMLAHHT OrthoDB:EOG41JZD3
NextBio:20873111 Uniprot:Q0VD42
Length = 245
Score = 113 (44.8 bits), Expect = 0.00018, P = 0.00018
Identities = 36/128 (28%), Positives = 56/128 (43%)
Query: 27 FVVFRGWPKHRAEASSC-FISLAHGTPAVLLSSHAAIRSTQTTFA---SPNTTLQDIVLE 82
+V F KHR+ +C ++ HG ++ LS++ F SPNT LQ VL
Sbjct: 20 YVSFCRLNKHRSYEWNCRLVTFTHGILSIGLSAYIGFIDGPWPFTHPGSPNTPLQVHVLC 79
Query: 83 FSMAYFLMDLLHYIIFTPRDILFILHHAATLYVFVTCRYVVHYGAFEXXXXXXXAEITSP 142
++ YF+ DL I F L + HH ++ + + G E +EIT+P
Sbjct: 80 LTLGYFIFDLGWCIYFRSEGPLMLAHHTLSILGIIVALVLGESGT-EVNAVLFGSEITNP 138
Query: 143 CQNV-WSL 149
+ W L
Sbjct: 139 LLQIRWFL 146
>UNIPROTKB|Q6ZRR5 [details] [associations]
symbol:TMEM136 "Transmembrane protein 136" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR006634 Pfam:PF03798 PROSITE:PS50922 SMART:SM00724
GO:GO:0016021 EMBL:AP001150 CTD:219902 HOGENOM:HOG000007565
HOVERGEN:HBG107117 OMA:LMLAHHT EMBL:AK128040 EMBL:AK294713
EMBL:AK304086 EMBL:BC015232 IPI:IPI00217915 IPI:IPI00643537
IPI:IPI00970846 IPI:IPI00970931 RefSeq:NP_001185599.1
RefSeq:NP_001185600.1 RefSeq:NP_001185601.1 RefSeq:NP_001185602.1
RefSeq:NP_001185603.1 RefSeq:NP_001185604.1 RefSeq:NP_777586.1
UniGene:Hs.643516 ProteinModelPortal:Q6ZRR5 STRING:Q6ZRR5
DMDM:308153509 Ensembl:ENST00000314475 Ensembl:ENST00000375095
Ensembl:ENST00000529187 GeneID:219902 KEGG:hsa:219902
UCSC:uc001pxg.3 UCSC:uc001pxh.2 UCSC:uc001pxj.3 UCSC:uc010rzm.2
GeneCards:GC11P120195 HGNC:HGNC:28280 neXtProt:NX_Q6ZRR5
PharmGKB:PA144596257 eggNOG:NOG316876 InParanoid:Q6ZRR5
ChiTaRS:TMEM136 GenomeRNAi:219902 NextBio:90842 ArrayExpress:Q6ZRR5
Bgee:Q6ZRR5 CleanEx:HS_TMEM136 Genevestigator:Q6ZRR5 Uniprot:Q6ZRR5
Length = 245
Score = 113 (44.8 bits), Expect = 0.00018, P = 0.00018
Identities = 35/128 (27%), Positives = 56/128 (43%)
Query: 27 FVVFRGWPKHRAEASSC-FISLAHGTPAVLLSSHAAIRSTQTTFA---SPNTTLQDIVLE 82
++ F KHR+ SC ++ HG ++ LS++ F SPNT LQ VL
Sbjct: 20 YISFCHLNKHRSYEWSCRLVTFTHGVLSIGLSAYIGFIDGPWPFTHPGSPNTPLQVHVLC 79
Query: 83 FSMAYFLMDLLHYIIFTPRDILFILHHAATLYVFVTCRYVVHYGAFEXXXXXXXAEITSP 142
++ YF+ DL + F L + HH ++ + + G E +E+T+P
Sbjct: 80 LTLGYFIFDLGWCVYFQSEGALMLAHHTLSILGIIMALVLGESGT-EVNAVLFGSELTNP 138
Query: 143 C-QNVWSL 149
Q W L
Sbjct: 139 LLQMRWFL 146
>RGD|1565079 [details] [associations]
symbol:Tmem136 "transmembrane protein 136" species:10116 "Rattus
norvegicus" [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR006634 Pfam:PF03798 PROSITE:PS50922 SMART:SM00724
RGD:1565079 GO:GO:0016021 EMBL:CH473975 CTD:219902
GeneTree:ENSGT00390000008162 OMA:LMLAHHT OrthoDB:EOG41JZD3
IPI:IPI00369408 RefSeq:NP_001101606.1 UniGene:Rn.229741
Ensembl:ENSRNOT00000038647 GeneID:315593 KEGG:rno:315593
UCSC:RGD:1565079 NextBio:669460 Uniprot:D3ZNW9
Length = 245
Score = 113 (44.8 bits), Expect = 0.00018, P = 0.00018
Identities = 37/123 (30%), Positives = 54/123 (43%)
Query: 32 GWPKHRAEASSC-FISLAHGTPAVLLSSHAAIRSTQTTFA---SPNTTLQDIVLEFSMAY 87
G KHR+ SC ++ HG ++ LS++ F SPNT LQ VL ++ Y
Sbjct: 25 GLNKHRSCEWSCRLVTFTHGILSIGLSAYIGFIDGPWPFTHPGSPNTPLQVHVLCLTLGY 84
Query: 88 FLMDLLHYIIFTPRDILFILHHAATLYVFVTCRYVVHYGAFEXXXXXXXAEITSPC-QNV 146
F+ DL I F L + HH ++ + + G E +EIT+P Q
Sbjct: 85 FIFDLGWCIYFQSEGALMLAHHTLSILGIIMALALGESGT-EVNAVLFGSEITNPLLQMR 143
Query: 147 WSL 149
W L
Sbjct: 144 WFL 146
>MGI|MGI:2685030 [details] [associations]
symbol:Tmem136 "transmembrane protein 136" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR006634 Pfam:PF03798 PROSITE:PS50922 SMART:SM00724
MGI:MGI:2685030 GO:GO:0016021 CTD:219902 eggNOG:NOG286009
GeneTree:ENSGT00390000008162 HOGENOM:HOG000007565
HOVERGEN:HBG107117 OMA:LMLAHHT OrthoDB:EOG41JZD3 EMBL:AK158698
EMBL:BC139047 IPI:IPI00356335 RefSeq:NP_001030035.1
UniGene:Mm.261326 PRIDE:Q3TYE7 Ensembl:ENSMUST00000061833
GeneID:235300 KEGG:mmu:235300 UCSC:uc009pbd.1 InParanoid:Q3TYE7
NextBio:382571 Bgee:Q3TYE7 CleanEx:MM_TMEM136 Genevestigator:Q3TYE7
Uniprot:Q3TYE7
Length = 245
Score = 110 (43.8 bits), Expect = 0.00041, P = 0.00041
Identities = 36/120 (30%), Positives = 53/120 (44%)
Query: 35 KHRAEASSC-FISLAHGTPAVLLSSHAAIRSTQTTFA---SPNTTLQDIVLEFSMAYFLM 90
KHR+ SC ++ HG ++ LS++ F SPNT LQ VL ++ YF+
Sbjct: 28 KHRSCEWSCRLVTFTHGVLSIGLSAYIGFIDGPWPFTHPGSPNTPLQVHVLCLTLGYFIF 87
Query: 91 DLLHYIIFTPRDILFILHHAATLYVFVTCRYVVHYGAFEXXXXXXXAEITSPC-QNVWSL 149
DL I F L + HH ++ + + G E +EIT+P Q W L
Sbjct: 88 DLGWCIYFQSEGPLMLAHHTLSILGIIMALALGESGT-EVNAVLFGSEITNPLLQMRWFL 146
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.330 0.140 0.466 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 246 239 0.00092 113 3 11 21 0.43 32
32 0.44 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 13
No. of states in DFA: 620 (66 KB)
Total size of DFA: 210 KB (2114 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 20.03u 0.10s 20.13t Elapsed: 00:00:01
Total cpu time: 20.03u 0.10s 20.13t Elapsed: 00:00:01
Start: Sat May 11 07:09:55 2013 End: Sat May 11 07:09:56 2013