Query 025889
Match_columns 246
No_of_seqs 111 out of 200
Neff 4.5
Searched_HMMs 13730
Date Mon Mar 25 19:54:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025889.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/025889hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2hjqa2 d.344.1.1 (A:1-49) Hyp 35.1 13 0.00098 23.3 2.7 23 106-132 22-44 (49)
2 d1ggwa_ a.39.1.5 (A:) Cdc4p {F 24.0 42 0.0031 23.4 4.3 52 190-241 86-137 (140)
3 d1fs1b1 a.157.1.1 (B:86-140) C 22.7 13 0.00092 24.0 0.9 15 83-97 40-54 (55)
4 d1wlza1 a.39.1.7 (A:229-311) D 21.4 36 0.0026 21.9 3.2 49 193-242 33-83 (83)
5 d2bskb1 g.83.1.1 (B:13-77) Mit 20.0 35 0.0026 22.4 2.8 23 194-216 28-50 (65)
6 d2mysc_ a.39.1.5 (C:) Myosin R 19.8 31 0.0023 24.0 2.7 49 193-241 94-142 (145)
7 d1tiza_ a.39.1.5 (A:) Calmodul 16.7 29 0.0021 21.7 1.7 51 193-243 14-65 (67)
8 d1qzxa2 a.36.1.1 (A:295-432) S 16.5 15 0.0011 27.7 0.2 42 202-243 3-44 (138)
9 d2fgea2 d.185.1.1 (A:798-993) 15.0 81 0.0059 23.1 4.3 45 82-129 145-191 (196)
10 d1w23a_ c.67.1.4 (A:) Phosphos 15.0 41 0.003 26.5 2.6 36 177-212 314-356 (360)
No 1
>d2hjqa2 d.344.1.1 (A:1-49) Hypothetical protein YqbF {Bacillus subtilis [TaxId: 1423]}
Probab=35.10 E-value=13 Score=23.26 Aligned_cols=23 Identities=22% Similarity=0.635 Sum_probs=18.1
Q ss_pred ceeEeechHHHHHHHHHhhcCCceeee
Q 025889 106 HICASLKTQLYRLLEHRSADCRYFVIP 132 (246)
Q Consensus 106 ~i~AvIp~~~Y~~m~~rAk~~P~FVlP 132 (246)
-++-++|.+.|+-+. ++|+||+-
T Consensus 22 gvsqtvpkklyeyln----enpyfilt 44 (49)
T d2hjqa2 22 GVSQTVPKKLYEYLN----ENPYFILT 44 (49)
T ss_dssp TCEEEECHHHHHHHH----HSTTEEEE
T ss_pred cccccccHHHHHHhc----CCCeEEee
Confidence 367789999888775 67999985
No 2
>d1ggwa_ a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=24.03 E-value=42 Score=23.44 Aligned_cols=52 Identities=13% Similarity=0.172 Sum_probs=36.8
Q ss_pred eeecCCCCCHHHHHHHHHHHHHhccccchhhHHHHhhCCCCCCCHHHHHHHh
Q 025889 190 DIVFTSKLTDSEAEWLLETIQSFYLNDVRFKLVERFNKEARNFEFKDVLRAL 241 (246)
Q Consensus 190 di~~~~~ls~~EAq~Lv~~lQ~FY~~~~r~~LVe~FN~~p~eFd~~~li~el 241 (246)
|...+..|+.+|-+.++..+-.=....+.-++++.+.......+|+++++.|
T Consensus 86 D~d~~G~I~~~el~~~l~~~g~~lt~~e~~~l~~~~d~~dG~I~y~eF~~~m 137 (140)
T d1ggwa_ 86 DKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVPVKDGMVNYHDFVQMI 137 (140)
T ss_dssp CSSCSSCCCHHHHHHHHHHHHSCSCHHHHHHHHHHTTCSSCCSTTTHHHHHH
T ss_pred hccCCCcchHHHHHHHHHHcCCCCCHHHHHHHHHhhCCCCCEEeHHHHHHHH
Confidence 3333456999998888876643233345557888898777789999999864
No 3
>d1fs1b1 a.157.1.1 (B:86-140) Cyclin A/CDK2-associated p45, Skp1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.73 E-value=13 Score=24.01 Aligned_cols=15 Identities=20% Similarity=0.408 Sum_probs=12.6
Q ss_pred hhhccCCHHHHHHHH
Q 025889 83 ERAKDKSAEDLATIW 97 (246)
Q Consensus 83 ell~~~s~eeI~~IW 97 (246)
+++++++++||.++.
T Consensus 40 ~~ikgKt~eeiR~~f 54 (55)
T d1fs1b1 40 NMIKGKTPEEIRKTF 54 (55)
T ss_dssp HHHTTCCHHHHHHHT
T ss_pred HHHcCCCHHHHHHHh
Confidence 567899999999875
No 4
>d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.35 E-value=36 Score=21.90 Aligned_cols=49 Identities=16% Similarity=0.142 Sum_probs=34.8
Q ss_pred cCCCCCHHHHHHHHHHHHHhccccc-hhhHHHHhhC-CCCCCCHHHHHHHhC
Q 025889 193 FTSKLTDSEAEWLLETIQSFYLNDV-RFKLVERFNK-EARNFEFKDVLRALS 242 (246)
Q Consensus 193 ~~~~ls~~EAq~Lv~~lQ~FY~~~~-r~~LVe~FN~-~p~eFd~~~li~el~ 242 (246)
.+..|+..|=+.++..+ .+..+++ -..+++.+.. +....+|+++++.++
T Consensus 33 ~~G~i~~~ef~~~l~~~-~~~l~~~e~~~l~~~~d~~~~g~I~y~eFl~~fs 83 (83)
T d1wlza1 33 KTNTISREEFRAICNRR-VQILTDEQFDRLWNEMPVNAKGRLKYPDFLSRFS 83 (83)
T ss_dssp CSSCBCHHHHHHHHHHH-TCCCCHHHHHHHHTTSCBCTTSCBCHHHHHHHHC
T ss_pred CCceEChhHHHHHHHHh-CCCCChhHHHHHhhccccCCCCcEeHHHHHHHhC
Confidence 34568999988777655 3445544 4468899965 446899999998764
No 5
>d2bskb1 g.83.1.1 (B:13-77) Mitochondrial import inner membrane translocase subunit Tim10 {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.03 E-value=35 Score=22.35 Aligned_cols=23 Identities=13% Similarity=0.182 Sum_probs=19.9
Q ss_pred CCCCCHHHHHHHHHHHHHhcccc
Q 025889 194 TSKLTDSEAEWLLETIQSFYLND 216 (246)
Q Consensus 194 ~~~ls~~EAq~Lv~~lQ~FY~~~ 216 (246)
.+.|+..|..||-+++.+|...-
T Consensus 28 ~~~L~~~E~~Ci~~C~~ky~d~~ 50 (65)
T d2bskb1 28 EAELSKGESVCLDRCVSKYLDIH 50 (65)
T ss_dssp SSSCCHHHHHHHHHHHHHHHHHH
T ss_pred CCcCCchHHHHHHHHHHHHHHHH
Confidence 35699999999999999998653
No 6
>d2mysc_ a.39.1.5 (C:) Myosin Regulatory Chain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=19.79 E-value=31 Score=24.01 Aligned_cols=49 Identities=8% Similarity=0.131 Sum_probs=31.5
Q ss_pred cCCCCCHHHHHHHHHHHHHhccccchhhHHHHhhCCCCCCCHHHHHHHh
Q 025889 193 FTSKLTDSEAEWLLETIQSFYLNDVRFKLVERFNKEARNFEFKDVLRAL 241 (246)
Q Consensus 193 ~~~~ls~~EAq~Lv~~lQ~FY~~~~r~~LVe~FN~~p~eFd~~~li~el 241 (246)
.+..|+.+|-+.++..+-.-...++.-++++....+....+|+++++.+
T Consensus 94 ~~G~I~~~el~~~l~~~g~~~~~~e~~~l~~~~~d~dG~I~y~eF~~~l 142 (145)
T d2mysc_ 94 GNGTVMGAELRHVLATLGEKMTEEEVEELMKGQEDSNGCINYEAFVKHI 142 (145)
T ss_pred CCCEEcHHHHHHHHHHhCCCCCHHHHHHHHhhcCCCCCeEEHHHHHHHH
Confidence 3446888888888765422122233445666555566789999999876
No 7
>d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=16.66 E-value=29 Score=21.69 Aligned_cols=51 Identities=10% Similarity=0.139 Sum_probs=36.2
Q ss_pred cCCCCCHHHHHHHHHHHHHhccccchhhHHHHhhC-CCCCCCHHHHHHHhCC
Q 025889 193 FTSKLTDSEAEWLLETIQSFYLNDVRFKLVERFNK-EARNFEFKDVLRALSM 243 (246)
Q Consensus 193 ~~~~ls~~EAq~Lv~~lQ~FY~~~~r~~LVe~FN~-~p~eFd~~~li~el~~ 243 (246)
.+..|+..|-+.++..+-.-...++..++++.+.. +...-+++++++.+..
T Consensus 14 ~~G~I~~~El~~~l~~lg~~~~~~~i~~~~~~~D~d~dg~I~~~EF~~~m~~ 65 (67)
T d1tiza_ 14 KDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIEK 65 (67)
T ss_dssp SSSCEEHHHHHHHHHHTCTTSCHHHHHHHHHHHCCSSSSEECHHHHHHHHHT
T ss_pred CcCcCcHHHHHHHHHHhccccchHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence 34568999988888766433333456678888855 6678999999987753
No 8
>d1qzxa2 a.36.1.1 (A:295-432) Signal sequence binding protein Ffh {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=16.50 E-value=15 Score=27.68 Aligned_cols=42 Identities=19% Similarity=0.208 Sum_probs=26.4
Q ss_pred HHHHHHHHHHhccccchhhHHHHhhCCCCCCCHHHHHHHhCC
Q 025889 202 AEWLLETIQSFYLNDVRFKLVERFNKEARNFEFKDVLRALSM 243 (246)
Q Consensus 202 Aq~Lv~~lQ~FY~~~~r~~LVe~FN~~p~eFd~~~li~el~~ 243 (246)
-.-|+..+|.-...++..++.+.+.....+|+++|+.+.+++
T Consensus 3 v~sLvEk~~~~~~~e~~~~~~~~~~~~~G~Ftl~Df~~Q~~~ 44 (138)
T d1qzxa2 3 IESILEKVKGLEEYDKIQKKMEDVMEGKGKLTLRDVYAQIIA 44 (138)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHC-------CCCSTTHHHHHH
T ss_pred hHHHHHHHHHhhcHHHHHHHHHHHHhccCCccHHHHHHHHHH
Confidence 345788888776556667788888766678999999988753
No 9
>d2fgea2 d.185.1.1 (A:798-993) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=14.98 E-value=81 Score=23.14 Aligned_cols=45 Identities=13% Similarity=0.096 Sum_probs=31.8
Q ss_pred hhhhccCCHHHHHHHHHHHhcC--CCceeEeechHHHHHHHHHhhcCCce
Q 025889 82 IERAKDKSAEDLATIWDDYHLG--RGHICASLKTQLYRLLEHRSADCRYF 129 (246)
Q Consensus 82 lell~~~s~eeI~~IW~~yH~~--k~~i~AvIp~~~Y~~m~~rAk~~P~F 129 (246)
++.|...++++|..+-+.|... +..++.+.+.+.-+ +...+.+.|
T Consensus 145 ~e~I~~VT~edi~~vA~kyl~~~~~~~~vvvg~~~~ie---~~~~~~~~~ 191 (196)
T d2fgea2 145 REEILTTSLKDFKDFAQAIDVVRDKGVAVAVASAEDID---AANNERSNF 191 (196)
T ss_dssp HHHHHTCCHHHHHHHHHHHHHHHHHCEEEEEECHHHHH---HHHHHTTTC
T ss_pred HHHHHhcCHHHHHHHHHHHhccccCceEEEEcCHHHHH---HHHHhhhhc
Confidence 4678899999999999999853 45677777876544 343444443
No 10
>d1w23a_ c.67.1.4 (A:) Phosphoserine aminotransferase, PSAT {Bacillus alcalophilus [TaxId: 1445]}
Probab=14.96 E-value=41 Score=26.48 Aligned_cols=36 Identities=17% Similarity=0.138 Sum_probs=26.3
Q ss_pred hhcccCCeEEEee-------eeecCCCCCHHHHHHHHHHHHHh
Q 025889 177 DFAESKDLVLIRG-------DIVFTSKLTDSEAEWLLETIQSF 212 (246)
Q Consensus 177 ELa~sKgIVLmrG-------di~~~~~ls~~EAq~Lv~~lQ~F 212 (246)
+.++++||+..+| .|-.-..+|.+|...|+..++.|
T Consensus 314 ~~l~~~GI~~~~G~~~~ggiRiS~~~~~t~e~V~~Li~~~~~~ 356 (360)
T d1w23a_ 314 AKAKEQGFVGLNGHRSVGGCRASIYNAVPIDACIALRELMIQF 356 (360)
T ss_dssp HHHHHTTEESCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred HHHHHCCCeeeeCCCccCcEEEEeeCCCCHHHHHHHHHHHHHH
Confidence 4456799998666 22222357999999999998887
Done!