BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025892
(246 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9XG77|PSA6_TOBAC Proteasome subunit alpha type-6 OS=Nicotiana tabacum GN=PAA1 PE=2
SV=1
Length = 246
Score = 473 bits (1217), Expect = e-133, Method: Compositional matrix adjust.
Identities = 223/246 (90%), Positives = 237/246 (96%)
Query: 1 MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKVPDKL 60
MSRGSG GYDRHITIFSPEGRLFQVEYAFKAVKA ITSIGVRGKDSVCVVTQKKVPDKL
Sbjct: 1 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSVCVVTQKKVPDKL 60
Query: 61 LDQTCVTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIAD 120
LDQT V+HLFPITKYLGLLATG TADAR+LV QARNEAAE+RFK+GYEMPVDVLS+WIAD
Sbjct: 61 LDQTSVSHLFPITKYLGLLATGMTADARTLVQQARNEAAEFRFKYGYEMPVDVLSKWIAD 120
Query: 121 KSQVYTQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLE 180
KSQVYTQHAYMRPLGVVAM+LGIDEEKGPQL+KCDPAGHFFGHKATSAG KEQEAINFLE
Sbjct: 121 KSQVYTQHAYMRPLGVVAMILGIDEEKGPQLFKCDPAGHFFGHKATSAGSKEQEAINFLE 180
Query: 181 KKMKNDPAFSYEETVQTAVSALQSVLQEDFKATEIEVGVVRSDDRVFRVLSSEEIDEHLT 240
KKMKNDPAFSYEETVQTA+SALQSVLQEDFKA+EIEVGVV+ +D +FRVL++EEIDEHLT
Sbjct: 181 KKMKNDPAFSYEETVQTAISALQSVLQEDFKASEIEVGVVKKEDPIFRVLTTEEIDEHLT 240
Query: 241 AISERD 246
AISERD
Sbjct: 241 AISERD 246
>sp|Q9LSU3|PSA6_ORYSJ Proteasome subunit alpha type-6 OS=Oryza sativa subsp. japonica
GN=PAA1 PE=2 SV=1
Length = 246
Score = 461 bits (1185), Expect = e-129, Method: Compositional matrix adjust.
Identities = 217/246 (88%), Positives = 234/246 (95%)
Query: 1 MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKVPDKL 60
MSRG+GAGYDRHITIFSPEGRL+QVEYAFKAVK+ +TSIGVRGKDSVCVVTQKKVPDKL
Sbjct: 1 MSRGTGAGYDRHITIFSPEGRLYQVEYAFKAVKSAGVTSIGVRGKDSVCVVTQKKVPDKL 60
Query: 61 LDQTCVTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIAD 120
LD T VTHLFPITKY+GLLATG TADARSLV+QARNEAAE+RFK+GYEMPVDVL++WIAD
Sbjct: 61 LDHTSVTHLFPITKYIGLLATGLTADARSLVYQARNEAAEFRFKWGYEMPVDVLAKWIAD 120
Query: 121 KSQVYTQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLE 180
K+QVYTQHAYMRPLGVVAMVLG DEEK QL+KCDPAGHFFGHKATSAGLKEQEAINFLE
Sbjct: 121 KAQVYTQHAYMRPLGVVAMVLGYDEEKNAQLFKCDPAGHFFGHKATSAGLKEQEAINFLE 180
Query: 181 KKMKNDPAFSYEETVQTAVSALQSVLQEDFKATEIEVGVVRSDDRVFRVLSSEEIDEHLT 240
KKMK+DP FSYEETVQ A+SALQSVLQEDFKATEIEVGVVR DDRVFR L++EEID+HLT
Sbjct: 181 KKMKDDPQFSYEETVQIAISALQSVLQEDFKATEIEVGVVRKDDRVFRALTTEEIDQHLT 240
Query: 241 AISERD 246
AISERD
Sbjct: 241 AISERD 246
>sp|O81147|PSA6B_ARATH Proteasome subunit alpha type-6-B OS=Arabidopsis thaliana GN=PAA2
PE=1 SV=1
Length = 246
Score = 460 bits (1184), Expect = e-129, Method: Compositional matrix adjust.
Identities = 214/246 (86%), Positives = 235/246 (95%)
Query: 1 MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKVPDKL 60
MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVKA ITSIGVRGKDSVCVVTQKKVPDKL
Sbjct: 1 MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSVCVVTQKKVPDKL 60
Query: 61 LDQTCVTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIAD 120
LDQ+ V+HLFP+TKYLGLLATG TAD+RSLV QARNEAAE+RF++GYEMP D+L++WIAD
Sbjct: 61 LDQSSVSHLFPVTKYLGLLATGMTADSRSLVQQARNEAAEFRFQYGYEMPADILAKWIAD 120
Query: 121 KSQVYTQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLE 180
KSQVYTQHAYMRPLGVVAMVLGIDEE+GP LYKCDPAGHF+GHKATSAG+KEQEA+NFLE
Sbjct: 121 KSQVYTQHAYMRPLGVVAMVLGIDEERGPLLYKCDPAGHFYGHKATSAGMKEQEAVNFLE 180
Query: 181 KKMKNDPAFSYEETVQTAVSALQSVLQEDFKATEIEVGVVRSDDRVFRVLSSEEIDEHLT 240
KKMK +PAF+Y+ETVQTA+SALQSVLQEDFKATEIEVGVVR+DD +FR L +EEIDEHLT
Sbjct: 181 KKMKENPAFTYDETVQTAISALQSVLQEDFKATEIEVGVVRADDPLFRSLRTEEIDEHLT 240
Query: 241 AISERD 246
AISERD
Sbjct: 241 AISERD 246
>sp|O48551|PSA6_SOYBN Proteasome subunit alpha type-6 OS=Glycine max GN=PAA1 PE=2 SV=2
Length = 246
Score = 459 bits (1182), Expect = e-129, Method: Compositional matrix adjust.
Identities = 216/246 (87%), Positives = 233/246 (94%)
Query: 1 MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKVPDKL 60
MSRGSG GY+RHITIFSPEGRLFQVEYAFKAVKA ITSIGVRGKDS+CVVT KKVPDKL
Sbjct: 1 MSRGSGGGYNRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSICVVTHKKVPDKL 60
Query: 61 LDQTCVTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIAD 120
LD T VTHLFPITKYLGLLATG TADAR+LV QARNEAAE+RF +GYEMPVDVL++WIAD
Sbjct: 61 LDNTSVTHLFPITKYLGLLATGMTADARTLVQQARNEAAEFRFTYGYEMPVDVLAKWIAD 120
Query: 121 KSQVYTQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLE 180
KSQVYTQHAYMRPLGVVAMVLGID+E GPQLYKCDPAGH+FGHKATSAGLK+QEAINFLE
Sbjct: 121 KSQVYTQHAYMRPLGVVAMVLGIDDEYGPQLYKCDPAGHYFGHKATSAGLKDQEAINFLE 180
Query: 181 KKMKNDPAFSYEETVQTAVSALQSVLQEDFKATEIEVGVVRSDDRVFRVLSSEEIDEHLT 240
KKMKNDP+F+YEETVQTA+SALQSVLQEDFKATEIEVGVVR D+ FRVL+++EIDEHLT
Sbjct: 181 KKMKNDPSFTYEETVQTAISALQSVLQEDFKATEIEVGVVRKDNPEFRVLTTDEIDEHLT 240
Query: 241 AISERD 246
AISERD
Sbjct: 241 AISERD 246
>sp|O81146|PSA6A_ARATH Proteasome subunit alpha type-6-A OS=Arabidopsis thaliana GN=PAA1
PE=1 SV=2
Length = 246
Score = 449 bits (1155), Expect = e-126, Method: Compositional matrix adjust.
Identities = 207/246 (84%), Positives = 233/246 (94%)
Query: 1 MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKVPDKL 60
MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVK ITSIGVRGKDSVCVVTQKKVPDKL
Sbjct: 1 MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVKTAGITSIGVRGKDSVCVVTQKKVPDKL 60
Query: 61 LDQTCVTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIAD 120
LDQ+ VTHLFPITKY+GL+ATG TADARSLV QARN+AAE+RF +GYEMPVD+L++WIAD
Sbjct: 61 LDQSSVTHLFPITKYIGLVATGITADARSLVQQARNQAAEFRFTYGYEMPVDILAKWIAD 120
Query: 121 KSQVYTQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLE 180
KSQVYTQHAYMRPLGVVAMV+G+DEE GP LYKCDPAGHF+GHKATSAG+KEQEA+NFLE
Sbjct: 121 KSQVYTQHAYMRPLGVVAMVMGVDEENGPLLYKCDPAGHFYGHKATSAGMKEQEAVNFLE 180
Query: 181 KKMKNDPAFSYEETVQTAVSALQSVLQEDFKATEIEVGVVRSDDRVFRVLSSEEIDEHLT 240
KKMK +P+F+++ETVQTA+SALQSVLQEDFKATEIEVGVVR+++ FR L++EEI+EHLT
Sbjct: 181 KKMKENPSFTFDETVQTAISALQSVLQEDFKATEIEVGVVRAENPEFRALTTEEIEEHLT 240
Query: 241 AISERD 246
AISERD
Sbjct: 241 AISERD 246
>sp|Q9QUM9|PSA6_MOUSE Proteasome subunit alpha type-6 OS=Mus musculus GN=Psma6 PE=1 SV=1
Length = 246
Score = 324 bits (831), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 150/246 (60%), Positives = 198/246 (80%)
Query: 1 MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKVPDKL 60
MSRGS AG+DRHITIFSPEGRL+QVEYAFKA+ +TS+ VRGKD +VTQKKVPDKL
Sbjct: 1 MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKL 60
Query: 61 LDQTCVTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIAD 120
LD + VTHLF IT+ +G + TG TAD+RS V +AR EAA +++K+GYE+PVD+L + IAD
Sbjct: 61 LDSSTVTHLFKITESIGCVMTGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIAD 120
Query: 121 KSQVYTQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLE 180
SQVYTQ+A MRPLG +++GIDEE+GPQ+YKCDPAG++ G KAT+AG+K+ E+ +FLE
Sbjct: 121 ISQVYTQNAEMRPLGCCMILIGIDEEQGPQVYKCDPAGYYCGFKATAAGVKQTESTSFLE 180
Query: 181 KKMKNDPAFSYEETVQTAVSALQSVLQEDFKATEIEVGVVRSDDRVFRVLSSEEIDEHLT 240
KK+K +++E+TV+TA++ L +VL DFK +EIEVGVV ++ FR+L+ EID HL
Sbjct: 181 KKVKKKFDWTFEQTVETAITCLSTVLSIDFKPSEIEVGVVTVENPKFRILTEAEIDAHLV 240
Query: 241 AISERD 246
A++ERD
Sbjct: 241 ALAERD 246
>sp|P60901|PSA6_RAT Proteasome subunit alpha type-6 OS=Rattus norvegicus GN=Psma6 PE=1
SV=1
Length = 246
Score = 324 bits (831), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 150/246 (60%), Positives = 198/246 (80%)
Query: 1 MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKVPDKL 60
MSRGS AG+DRHITIFSPEGRL+QVEYAFKA+ +TS+ VRGKD +VTQKKVPDKL
Sbjct: 1 MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKL 60
Query: 61 LDQTCVTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIAD 120
LD + VTHLF IT+ +G + TG TAD+RS V +AR EAA +++K+GYE+PVD+L + IAD
Sbjct: 61 LDSSTVTHLFKITENIGCVMTGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIAD 120
Query: 121 KSQVYTQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLE 180
SQVYTQ+A MRPLG +++GIDEE+GPQ+YKCDPAG++ G KAT+AG+K+ E+ +FLE
Sbjct: 121 ISQVYTQNAEMRPLGCCMILIGIDEEQGPQVYKCDPAGYYCGFKATAAGVKQTESTSFLE 180
Query: 181 KKMKNDPAFSYEETVQTAVSALQSVLQEDFKATEIEVGVVRSDDRVFRVLSSEEIDEHLT 240
KK+K +++E+TV+TA++ L +VL DFK +EIEVGVV ++ FR+L+ EID HL
Sbjct: 181 KKVKKKFDWTFEQTVETAITCLSTVLSIDFKPSEIEVGVVTVENPKFRILTEAEIDAHLV 240
Query: 241 AISERD 246
A++ERD
Sbjct: 241 ALAERD 246
>sp|P60900|PSA6_HUMAN Proteasome subunit alpha type-6 OS=Homo sapiens GN=PSMA6 PE=1 SV=1
Length = 246
Score = 324 bits (831), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 150/246 (60%), Positives = 198/246 (80%)
Query: 1 MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKVPDKL 60
MSRGS AG+DRHITIFSPEGRL+QVEYAFKA+ +TS+ VRGKD +VTQKKVPDKL
Sbjct: 1 MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKL 60
Query: 61 LDQTCVTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIAD 120
LD + VTHLF IT+ +G + TG TAD+RS V +AR EAA +++K+GYE+PVD+L + IAD
Sbjct: 61 LDSSTVTHLFKITENIGCVMTGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIAD 120
Query: 121 KSQVYTQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLE 180
SQVYTQ+A MRPLG +++GIDEE+GPQ+YKCDPAG++ G KAT+AG+K+ E+ +FLE
Sbjct: 121 ISQVYTQNAEMRPLGCCMILIGIDEEQGPQVYKCDPAGYYCGFKATAAGVKQTESTSFLE 180
Query: 181 KKMKNDPAFSYEETVQTAVSALQSVLQEDFKATEIEVGVVRSDDRVFRVLSSEEIDEHLT 240
KK+K +++E+TV+TA++ L +VL DFK +EIEVGVV ++ FR+L+ EID HL
Sbjct: 181 KKVKKKFDWTFEQTVETAITCLSTVLSIDFKPSEIEVGVVTVENPKFRILTEAEIDAHLV 240
Query: 241 AISERD 246
A++ERD
Sbjct: 241 ALAERD 246
>sp|Q2YDE4|PSA6_BOVIN Proteasome subunit alpha type-6 OS=Bos taurus GN=PSMA6 PE=1 SV=1
Length = 246
Score = 324 bits (831), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 150/246 (60%), Positives = 198/246 (80%)
Query: 1 MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKVPDKL 60
MSRGS AG+DRHITIFSPEGRL+QVEYAFKA+ +TS+ VRGKD +VTQKKVPDKL
Sbjct: 1 MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKL 60
Query: 61 LDQTCVTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIAD 120
LD + VTHLF IT+ +G + TG TAD+RS V +AR EAA +++K+GYE+PVD+L + IAD
Sbjct: 61 LDSSTVTHLFKITENIGCVMTGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIAD 120
Query: 121 KSQVYTQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLE 180
SQVYTQ+A MRPLG +++GIDEE+GPQ+YKCDPAG++ G KAT+AG+K+ E+ +FLE
Sbjct: 121 ISQVYTQNAEMRPLGCCMILIGIDEEQGPQVYKCDPAGYYCGFKATAAGVKQTESTSFLE 180
Query: 181 KKMKNDPAFSYEETVQTAVSALQSVLQEDFKATEIEVGVVRSDDRVFRVLSSEEIDEHLT 240
KK+K +++E+TV+TA++ L +VL DFK +EIEVGVV ++ FR+L+ EID HL
Sbjct: 181 KKVKKKFDWTFEQTVETAITCLSTVLSIDFKPSEIEVGVVTVENPKFRILTEAEIDAHLV 240
Query: 241 AISERD 246
A++ERD
Sbjct: 241 ALAERD 246
>sp|O94517|PSA1_SCHPO Probable proteasome subunit alpha type-1 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPBC646.16 PE=3 SV=1
Length = 244
Score = 283 bits (723), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 136/241 (56%), Positives = 183/241 (75%), Gaps = 4/241 (1%)
Query: 8 GYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKVPDKLLDQTCVT 67
G+DR IT+FSPEGRL+QVEYAFKA ITS+GV GK+ CV++QKKVPDKL+D + V
Sbjct: 6 GFDRTITVFSPEGRLYQVEYAFKAFNNAGITSVGVTGKNCACVISQKKVPDKLIDASTVK 65
Query: 68 HLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIADKSQVYTQ 127
H+FPITK +G + TG+ ADAR+ V +AR+EAAE+ +K GY MP DVL++ +A+ +QV TQ
Sbjct: 66 HVFPITKGIGCVMTGSIADARAQVSRARSEAAEFEYKNGYPMPCDVLAKRMANIAQVSTQ 125
Query: 128 HAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND- 186
A MRPLGV ++ +D+E GP L+K DPAG + G+KATSAG K+ E IN+LEK+ K D
Sbjct: 126 RAAMRPLGVAMTLVAVDDEIGPSLFKLDPAGFYIGYKATSAGPKQTETINWLEKRFKKDG 185
Query: 187 -PAFSYEETVQTAVSALQSVLQEDFKATEIEVGVVRSDDRVFRVLSSEEIDEHLTAISER 245
P+ + +TV+T + AL S L DFK+TE+++GVV DD+ FRVLS EEI+ HL +I+E+
Sbjct: 186 IPS-NLTDTVETGIQALMSSLSTDFKSTELQIGVVE-DDKPFRVLSVEEIEAHLQSIAEK 243
Query: 246 D 246
D
Sbjct: 244 D 244
>sp|Q9XZJ4|PSA6_DROME Proteasome subunit alpha type-6 OS=Drosophila melanogaster
GN=Prosalpha1 PE=2 SV=2
Length = 244
Score = 278 bits (710), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 140/246 (56%), Positives = 172/246 (69%), Gaps = 2/246 (0%)
Query: 1 MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKVPDKL 60
MSRGS AG+DRHITIFSPEGRL+QVEYAFKA+ IT++ ++ D V TQKKV +K
Sbjct: 1 MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAIAQENITTVALKSGDCAVVATQKKVTEKN 60
Query: 61 LDQTCVTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIAD 120
+ VTHLF ITK +G TG AD+RS V +AR EAA +R+K+GYEMPVDVL R IAD
Sbjct: 61 IVPETVTHLFRITKDIGCAMTGRIADSRSQVQKARYEAANFRYKYGYEMPVDVLCRRIAD 120
Query: 121 KSQVYTQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLE 180
+QVYTQ+A MRPLG +++ D E GP +YK DPAG+F G KA S G K EA ++LE
Sbjct: 121 INQVYTQNAEMRPLGCSMVLIAYDNEIGPSVYKTDPAGYFSGFKACSVGAKTLEANSYLE 180
Query: 181 KKMKNDPAFSYEETVQTAVSALQSVLQEDFKATEIEVGVVRSDDRVFRVLSSEEIDEHLT 240
KK K P S E+ +Q A+S L SVL DFK IE+GVV D FR+L EI+EHLT
Sbjct: 181 KKYK--PNLSEEKAIQLAISCLSSVLAIDFKPNGIEIGVVSKSDPTFRILDEREIEEHLT 238
Query: 241 AISERD 246
I+E+D
Sbjct: 239 KIAEKD 244
>sp|Q54XM7|PSA6_DICDI Proteasome subunit alpha type-6 OS=Dictyostelium discoideum
GN=psmA6 PE=3 SV=1
Length = 250
Score = 275 bits (703), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 130/251 (51%), Positives = 182/251 (72%), Gaps = 6/251 (2%)
Query: 1 MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKVPDKL 60
MSR AGYD I IFSP+G+L+Q+EYAFKA+K +TS+G+RGKD V V TQKK+PDKL
Sbjct: 1 MSRSGTAGYDMSI-IFSPQGKLYQIEYAFKAIKTGGLTSVGIRGKDCVVVATQKKIPDKL 59
Query: 61 LDQTCVTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIAD 120
+D VT L+ +T Y+G + TG D++S +A E A + KFGY++P +VL++ +AD
Sbjct: 60 IDPKSVTSLYKLTDYIGCVQTGIVPDSKSQASRAIQECATFHHKFGYQIPPNVLAKRMAD 119
Query: 121 KSQVYTQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLE 180
+Q+ TQHA RPLGV +++GID+E GPQL+K DPAG F G+KAT+AG KEQE+ NFLE
Sbjct: 120 IAQLSTQHASARPLGVAMILIGIDDELGPQLFKVDPAGVFTGYKATAAGEKEQESTNFLE 179
Query: 181 KKMKNDPAFSYEETVQT-----AVSALQSVLQEDFKATEIEVGVVRSDDRVFRVLSSEEI 235
KK K++P S +ET+Q A+S LQSVL D K++++E+G+ D+R F +++ E+I
Sbjct: 180 KKFKSNPQLSKDETIQVSLIVMAISTLQSVLGADLKSSDLEIGICTMDNRKFVIMTDEDI 239
Query: 236 DEHLTAISERD 246
D LT ++ERD
Sbjct: 240 DSQLTKLAERD 250
>sp|P21243|PSA1_YEAST Proteasome subunit alpha type-1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=SCL1 PE=1 SV=1
Length = 252
Score = 241 bits (616), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 125/243 (51%), Positives = 171/243 (70%), Gaps = 7/243 (2%)
Query: 9 YDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKVPDKLLDQTCVTH 68
YDRHITIFSPEGRL+QVEYAFKA T I S+ VRGKD V++QKKVPDKLLD T V++
Sbjct: 12 YDRHITIFSPEGRLYQVEYAFKATNQTNINSLAVRGKDCTVVISQKKVPDKLLDPTTVSY 71
Query: 69 LFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIADKSQVYTQH 128
+F I++ +G++ G DAR+ +A+ EAAE+R+K+GY+MP DVL++ +A+ SQ+YTQ
Sbjct: 72 IFCISRTIGMVVNGPIPDARNAALRAKAEAAEFRYKYGYDMPCDVLAKRMANLSQIYTQR 131
Query: 129 AYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLE---KKMKN 185
AYMRPLGV+ + +DEE GP +YK DPAG++ G+KAT+ G K+QE LE KK K
Sbjct: 132 AYMRPLGVILTFVSVDEELGPSIYKTDPAGYYVGYKATATGPKQQEITTNLENHFKKSKI 191
Query: 186 DPAF--SYEETVQTAVSALQSVLQEDFKATEIEVGVVRSDDRVFRVLSSEEIDEHLTAIS 243
D S+E+ V+ A++ + L +F ++EVGV D F LS+E I+E L AI+
Sbjct: 192 DHINEESWEKVVEFAITHMIDALGTEFSKNDLEVGVATKDK--FFTLSAENIEERLVAIA 249
Query: 244 ERD 246
E+D
Sbjct: 250 EQD 252
>sp|O17586|PSA6_CAEEL Proteasome subunit alpha type-6 OS=Caenorhabditis elegans GN=pas-1
PE=1 SV=1
Length = 246
Score = 238 bits (608), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 109/246 (44%), Positives = 170/246 (69%)
Query: 1 MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKVPDKL 60
MSRGS AG+DRHITIFSPEGR++QVEYAFKA+ +T +T++ V+G D+ + QK+VPD L
Sbjct: 1 MSRGSSAGFDRHITIFSPEGRVYQVEYAFKAINSTNLTAVAVKGADAAVIAVQKRVPDSL 60
Query: 61 LDQTCVTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIAD 120
+ VT ++ I++ +G A G DA+ + +A+ EAA +++K GY+MP ++L++ +AD
Sbjct: 61 IVADTVTSVYQISQSVGCCAIGMIPDAKFQIKRAQGEAASWKYKNGYDMPCELLAKKMAD 120
Query: 121 KSQVYTQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLE 180
+Q YTQ+A MR LG + + D+EKGP++Y+ DPAG++ G K S G+K+ A +FLE
Sbjct: 121 LNQYYTQNAEMRSLGCALLFISYDDEKGPEVYRVDPAGYYRGMKGVSVGVKQLPATSFLE 180
Query: 181 KKMKNDPAFSYEETVQTAVSALQSVLQEDFKATEIEVGVVRSDDRVFRVLSSEEIDEHLT 240
KK+K + E ++ A+ ALQ+ L D ++ ++EV VV D+ F L+S++++ HL
Sbjct: 181 KKIKKKSELTSTEAIELAIEALQTSLGIDVRSKDLEVVVVTKDNSKFTKLTSDQVEHHLN 240
Query: 241 AISERD 246
I+ RD
Sbjct: 241 QIANRD 246
>sp|Q9GU37|PSA1_TRYBB Proteasome subunit alpha type-1 OS=Trypanosoma brucei brucei PE=2
SV=1
Length = 266
Score = 195 bits (495), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 108/251 (43%), Positives = 156/251 (62%), Gaps = 11/251 (4%)
Query: 1 MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKVPDKL 60
MSR AG+D++IT+FSPEG L+QVEYAFKAV + ++ +R KD+V V TQ VPDKL
Sbjct: 1 MSR---AGFDKYITVFSPEGSLYQVEYAFKAVTYAGLLTVAIRCKDAVLVFTQHSVPDKL 57
Query: 61 LDQTCVTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIAD 120
+ +T L+ + G+ TG D ++LV +ARNEA+EY++++G M V VL++ D
Sbjct: 58 MRPETITSLYNVNDNTGVCITGRAPDGKALVQKARNEASEYKYRYGMPMLVSVLAKPWQD 117
Query: 121 KSQVYTQHAYMRPLGVVAMVLGI--DEEKG---PQLYKCDPAGHFFGHKATSAGLKEQEA 175
+QV TQ A MR +G + +G+ ++E G PQ+Y DPAG H A + G K+ EA
Sbjct: 118 MAQVRTQQAGMRLMGTIMTFVGMEQNDEDGAWIPQIYCVDPAGGAAVH-ACAVGKKQIEA 176
Query: 176 INFLEKKMKNDP--AFSYEETVQTAVSALQSVLQEDFKATEIEVGVVRSDDRVFRVLSSE 233
FLEKK KN P S +E A++ALQS L E +A+ +EVG +DD F +S
Sbjct: 177 CAFLEKKQKNAPFHTLSQKEAAMIALAALQSALGESLRASGVEVGRCTADDHHFLRVSDR 236
Query: 234 EIDEHLTAISE 244
E+ + LT +++
Sbjct: 237 EVKKWLTPLAK 247
>sp|Q8TYB7|PSA_METKA Proteasome subunit alpha OS=Methanopyrus kandleri (strain AV19 /
DSM 6324 / JCM 9639 / NBRC 100938) GN=psmA PE=3 SV=1
Length = 246
Score = 167 bits (424), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 95/240 (39%), Positives = 145/240 (60%), Gaps = 8/240 (3%)
Query: 9 YDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKVPDKLLDQTCVTH 68
YDR IT+FSP+GRLFQVEYA +AVK T++G++ ++ V + K+V KL++ +
Sbjct: 10 YDRAITVFSPDGRLFQVEYAREAVK-RGTTALGIKVEEGVVLGVDKRVTSKLIEPESIEK 68
Query: 69 LFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIADKSQVYTQH 128
++ I ++G G ADAR LV +AR EA YR+ +G + VDVL + I D QVYTQH
Sbjct: 69 VYQIDTHIGAATAGLVADARVLVERARIEAQTYRYTYGEPIDVDVLVKAICDLKQVYTQH 128
Query: 129 AYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPA 188
+RP G ++ G+D KG +L++ DP+G HKAT+ G QEA++ E++ + D
Sbjct: 129 GGVRPFGTALLIAGVD-TKGCRLFETDPSGALTEHKATAIGEGRQEALDVFEEEYRED-- 185
Query: 189 FSYEETVQTAVSALQSVLQEDFKATEIEVGVVRSDDRVFRVLSSEEIDEHLTAI--SERD 246
+ +E ++ AV AL +E+ A +E+ VV D + FR L ++I+E + SE D
Sbjct: 186 MTLQEAIELAVRALYEASREETTADNLEIAVV--DKQGFRKLERKKIEEMFERVVGSEED 243
>sp|O59219|PSA_PYRHO Proteasome subunit alpha OS=Pyrococcus horikoshii (strain ATCC
700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=psmA PE=3 SV=1
Length = 260
Score = 166 bits (419), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 89/234 (38%), Positives = 144/234 (61%), Gaps = 6/234 (2%)
Query: 7 AGYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKVPDKLLDQTCV 66
AGYDR IT+FSP+GRLFQV YA +AVK A T++GV+ + V + +K++ +L++
Sbjct: 8 AGYDRAITVFSPDGRLFQVNYAREAVKRGA-TAVGVKCNEGVVLAVEKRITSRLIEPESY 66
Query: 67 THLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIADKSQVYT 126
+F I ++ ++G ADAR LV++AR EA +R +G P+ V+ + I D Q++T
Sbjct: 67 EKIFQIDDHIAAASSGIIADARVLVNRARLEAQIHRLTYGEPAPLAVIVKKICDLKQMHT 126
Query: 127 QHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 186
Q+ +RP G ++ G++E+ P+LY+ DP+G +F KA + G A+ E+K K+D
Sbjct: 127 QYGGVRPFGAALLMAGVNEK--PELYETDPSGAYFAWKAVAIGSGRNTAMAIFEEKYKDD 184
Query: 187 PAFSYEETVQTAVSALQSVLQEDFKATEIEVGVVRSDDRVFRVLSSEEIDEHLT 240
S EE ++ A+ AL +++ A IEV ++ D+ FR LS EEI+++L
Sbjct: 185 --MSLEEAIKLAIFALAKTMEKP-SAENIEVAIITVKDKKFRKLSREEIEKYLN 235
>sp|Q8TPX5|PSA_METAC Proteasome subunit alpha OS=Methanosarcina acetivorans (strain ATCC
35395 / DSM 2834 / JCM 12185 / C2A) GN=psmA PE=3 SV=1
Length = 247
Score = 165 bits (417), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 86/238 (36%), Positives = 139/238 (58%), Gaps = 4/238 (1%)
Query: 8 GYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKVPDKLLDQTCVT 67
GYDR IT+FSP+GRLFQVEYA +AVK T++G++ D V ++ K++ +L++ +
Sbjct: 6 GYDRAITVFSPDGRLFQVEYAREAVK-RGTTAVGIKAADGVVLLVDKRITSRLVEAESIE 64
Query: 68 HLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIADKSQVYTQ 127
+F I +++G +G ADARSLV +AR EA R + + V+V+S+ I D Q YTQ
Sbjct: 65 KIFQIDEHIGAATSGLVADARSLVDRARVEAQVNRVSYDEPIGVEVISKKICDHKQTYTQ 124
Query: 128 HAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDP 187
+ +RP G ++ G+D+ K P+L++ DP+G +KAT+ G + E + D
Sbjct: 125 YGGVRPYGTALLIAGVDDNK-PRLFETDPSGALLEYKATAIGAGRNAVVEVFEADYRED- 182
Query: 188 AFSYEETVQTAVSALQSVLQEDFKATEIEVGVVRSDDRVFRVLSSEEIDEHLTAISER 245
+ + + + AL + F A +EVGVV +D+ FR L EE++ ++ I E+
Sbjct: 183 -MNMDAAILLGMDALYKAAEGKFDAGTLEVGVVSLEDKKFRKLGPEEVENYVQQILEK 239
>sp|O29760|PSA_ARCFU Proteasome subunit alpha OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=psmA PE=1 SV=1
Length = 246
Score = 164 bits (415), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 89/238 (37%), Positives = 143/238 (60%), Gaps = 5/238 (2%)
Query: 8 GYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKVPDKLLDQTCVT 67
GYDR IT+FSP+GRLFQVEYA +AVK A T+IG++ K+ V ++ K+V KLL+ +
Sbjct: 7 GYDRAITVFSPDGRLFQVEYAREAVKRGA-TAIGIKCKEGVILIADKRVGSKLLEADTIE 65
Query: 68 HLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIADKSQVYTQ 127
++ I +++ +G ADAR L+ +AR EA R + + V L++ I D Q YTQ
Sbjct: 66 KIYKIDEHICAATSGLVADARVLIDRARIEAQINRLTYDEPITVKELAKKICDFKQQYTQ 125
Query: 128 HAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDP 187
+ +RP GV ++ G+DE P+LY+ DP+G +KAT+ G+ F EK+ ++D
Sbjct: 126 YGGVRPFGVSLLIAGVDEV--PKLYETDPSGALLEYKATAIGMGRNAVTEFFEKEYRDD- 182
Query: 188 AFSYEETVQTAVSALQSVLQEDFKATEIEVGVVRSDDRVFRVLSSEEIDEHLTAISER 245
S+++ + + A+ ++ + IEVG V+ DDR F+ +S EE+ ++ +ER
Sbjct: 183 -LSFDDAMVLGLVAMGLSIESELVPENIEVGYVKVDDRTFKEVSPEELKPYVERANER 239
>sp|Q8U0L6|PSA_PYRFU Proteasome subunit alpha OS=Pyrococcus furiosus (strain ATCC 43587
/ DSM 3638 / JCM 8422 / Vc1) GN=psmA PE=3 SV=1
Length = 260
Score = 163 bits (413), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 88/234 (37%), Positives = 144/234 (61%), Gaps = 6/234 (2%)
Query: 7 AGYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKVPDKLLDQTCV 66
AGYDR IT+FSP+GRLFQV YA +AVK A T++GV+ + V + +K++ +L++
Sbjct: 8 AGYDRAITVFSPDGRLFQVNYAREAVKRGA-TAVGVKCGEGVVLAVEKRITSRLIEPDSY 66
Query: 67 THLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIADKSQVYT 126
+F I ++ ++G ADAR LV++AR EA YR +G PV V+ + I D Q++T
Sbjct: 67 EKIFQIDDHIAAASSGIIADARVLVNRARLEAQIYRLTYGEPAPVSVIVKKICDLKQMHT 126
Query: 127 QHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 186
Q+ +RP G ++ GI++ P+LY+ DP+G +F KA + G A+ E+K ++D
Sbjct: 127 QYGGVRPFGAALLMAGINDR--PELYETDPSGAYFAWKAVAIGSGRNTAMAIFEEKYRDD 184
Query: 187 PAFSYEETVQTAVSALQSVLQEDFKATEIEVGVVRSDDRVFRVLSSEEIDEHLT 240
+ E+ ++ A+ AL + E+ A IEV V+ D+ FR L+ +EI+++L+
Sbjct: 185 --MNLEDAIKLALMALAKTM-ENPSADNIEVAVITVKDKKFRKLTRDEIEKYLS 235
>sp|Q9V122|PSA_PYRAB Proteasome subunit alpha OS=Pyrococcus abyssi (strain GE5 / Orsay)
GN=psmA PE=3 SV=1
Length = 260
Score = 163 bits (412), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 88/233 (37%), Positives = 143/233 (61%), Gaps = 6/233 (2%)
Query: 7 AGYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKVPDKLLDQTCV 66
AGYDR IT+FSP+GRLFQV YA +AVK A T++GV+ KD V + +K++ +L++
Sbjct: 8 AGYDRAITVFSPDGRLFQVNYAREAVKRGA-TAVGVKCKDGVVLAVEKRITSRLIEPESY 66
Query: 67 THLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIADKSQVYT 126
+F I ++ ++G ADAR LV++AR EA +R +G P+ V+ + I D Q++T
Sbjct: 67 EKIFQIDDHIAAASSGIIADARVLVNRARLEAQIHRLTYGEPAPLAVIVKKICDLKQMHT 126
Query: 127 QHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 186
Q+ +RP G ++ G++++ P+LY+ DP+G +F KA + G A+ E K ++D
Sbjct: 127 QYGGVRPFGAALLMAGVNDK--PELYETDPSGAYFAWKAVAIGSGRNTAMAIFEDKYRDD 184
Query: 187 PAFSYEETVQTAVSALQSVLQEDFKATEIEVGVVRSDDRVFRVLSSEEIDEHL 239
+ +E ++ A+ AL +++ A IEV V+ D+ FR LS EEI++ L
Sbjct: 185 --MTLDEAIKLAIFALAKTMEKP-SAENIEVAVITVKDKKFRKLSKEEIEKFL 234
>sp|Q8PTU1|PSA_METMA Proteasome subunit alpha OS=Methanosarcina mazei (strain ATCC
BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88)
GN=psmA PE=3 SV=1
Length = 249
Score = 162 bits (411), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 86/238 (36%), Positives = 138/238 (57%), Gaps = 4/238 (1%)
Query: 8 GYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKVPDKLLDQTCVT 67
GYDR IT+FSP+GRLFQVEYA +AVK T++G++ D V ++ K++ +L++ +
Sbjct: 8 GYDRAITVFSPDGRLFQVEYAREAVK-RGTTAVGIKAADGVVLLVDKRITSRLVEAESIE 66
Query: 68 HLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIADKSQVYTQ 127
+F I ++G +G ADARSLV +AR EA R + + V+V+S+ I D Q YTQ
Sbjct: 67 KIFQIDDHIGAATSGLVADARSLVDRARVEAQVNRVSYDELIGVEVISKKICDHKQTYTQ 126
Query: 128 HAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDP 187
+ +RP G ++ G+D+ K P+L++ DP+G +KAT+ G + E + D
Sbjct: 127 YGGVRPYGTALLIAGVDDNK-PRLFETDPSGALLEYKATAIGAGRNAVVEVFEADYRED- 184
Query: 188 AFSYEETVQTAVSALQSVLQEDFKATEIEVGVVRSDDRVFRVLSSEEIDEHLTAISER 245
+ + + + AL + F A +EVGVV +D+ FR L EE++ ++ I E+
Sbjct: 185 -MNIDAAILLGMDALYKAAEGKFDAGTLEVGVVSLEDKKFRKLGPEEVENYVHQILEK 241
>sp|Q59565|PSA_METTE Proteasome subunit alpha OS=Methanosarcina thermophila GN=psmA PE=3
SV=1
Length = 247
Score = 162 bits (409), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 86/238 (36%), Positives = 137/238 (57%), Gaps = 4/238 (1%)
Query: 8 GYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKVPDKLLDQTCVT 67
GYDR IT+FSP+GRLFQVEYA +AVK T++G++ D V ++ K++ +L++ +
Sbjct: 6 GYDRAITVFSPDGRLFQVEYAREAVK-RGTTAVGIKAADGVVLLVDKRITSRLVEAESIE 64
Query: 68 HLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIADKSQVYTQ 127
+F I ++G +G ADAR+LV +AR EA R + + V+V+S+ I D Q YTQ
Sbjct: 65 KIFQIDDHIGAATSGLVADARALVDRARVEAQVNRVSYDELIGVEVISKKICDHKQTYTQ 124
Query: 128 HAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDP 187
+ +RP G ++ G+D+++ P+L++ DP+G +KAT+ G + E K D
Sbjct: 125 YGGVRPYGTALLIAGVDDKR-PRLFETDPSGALLEYKATAIGAGRNAVVEVFEADYKED- 182
Query: 188 AFSYEETVQTAVSALQSVLQEDFKATEIEVGVVRSDDRVFRVLSSEEIDEHLTAISER 245
+ E + + AL + F A +EVGVV D+ FR L EE+ ++ I E+
Sbjct: 183 -MNIEAAILLGMDALYKAAEGKFDAGTLEVGVVSLQDKKFRKLEPEEVGNYVQQILEK 239
>sp|C6A459|PSA_THESM Proteasome subunit alpha OS=Thermococcus sibiricus (strain MM 739 /
DSM 12597) GN=psmA PE=3 SV=1
Length = 260
Score = 161 bits (408), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 88/233 (37%), Positives = 144/233 (61%), Gaps = 6/233 (2%)
Query: 7 AGYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKVPDKLLDQTCV 66
AGYDR IT+FSP+GRLFQV+YA +AVK A T++GV+ KD V + +K+V KL++
Sbjct: 8 AGYDRAITVFSPDGRLFQVQYAREAVKRGA-TAVGVKCKDGVVLAVEKRVTSKLIEPESY 66
Query: 67 THLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIADKSQVYT 126
+F I ++ ++G ADAR LV +AR EA YR +G +P+ VL + I D Q++T
Sbjct: 67 EKIFQIDDHIAAASSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQMHT 126
Query: 127 QHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 186
Q+ +RP G ++ G++E+ P+L++ DP+G +F KA + G A+ E+K +++
Sbjct: 127 QYGGVRPFGAALLMAGVNEK--PELFETDPSGAYFEWKAVAIGSGRNTAMAIFEEKYRDE 184
Query: 187 PAFSYEETVQTAVSALQSVLQEDFKATEIEVGVVRSDDRVFRVLSSEEIDEHL 239
+ EE ++ AV AL +++E IEV V+ ++ F+ ++ EE+ + L
Sbjct: 185 --MTLEEAIKLAVLALSKIMEEP-SPESIEVAVISVKEKKFKKITPEEVAKCL 234
>sp|Q469M6|PSA_METBF Proteasome subunit alpha OS=Methanosarcina barkeri (strain Fusaro /
DSM 804) GN=psmA PE=3 SV=1
Length = 249
Score = 160 bits (406), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 85/245 (34%), Positives = 139/245 (56%), Gaps = 4/245 (1%)
Query: 1 MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKVPDKL 60
M GYDR IT+FSP+GRLFQVEYA +AVK T++G++ D V ++ K++ +L
Sbjct: 1 MQMAPQMGYDRAITVFSPDGRLFQVEYAREAVK-RGTTAVGIKAADGVVLLVDKRITSRL 59
Query: 61 LDQTCVTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIAD 120
++ + +F I ++G +G ADARSLV +AR EA R + + V+V+S+ I D
Sbjct: 60 VEAESIEKIFQIDDHIGAATSGLVADARSLVDRARVEAQVNRVSYDEPIGVEVISKKICD 119
Query: 121 KSQVYTQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLE 180
Q YTQ+ +RP G ++ G+D+ P+L++ DP+G +KAT+ G + E
Sbjct: 120 HKQTYTQYGGVRPYGTALLIAGVDDNL-PRLFETDPSGALLEYKATAIGAGRNAVVEVFE 178
Query: 181 KKMKNDPAFSYEETVQTAVSALQSVLQEDFKATEIEVGVVRSDDRVFRVLSSEEIDEHLT 240
+ + D + + + + AL + F A+ +EVG+V D+ FR L EE++ ++
Sbjct: 179 AEYRQD--MNMDAAILLGMDALYRAAEGKFDASTLEVGIVSLQDKKFRKLVPEEVENYVQ 236
Query: 241 AISER 245
I E+
Sbjct: 237 QILEK 241
>sp|O24733|PSA_THEK1 Proteasome subunit alpha OS=Thermococcus sp. (strain KS-1) GN=psmA
PE=3 SV=1
Length = 260
Score = 158 bits (399), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 87/236 (36%), Positives = 142/236 (60%), Gaps = 6/236 (2%)
Query: 7 AGYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKVPDKLLDQTCV 66
AGYDR IT+FSP+GRLFQV YA +AVK A T++GV+ KD V + +K++ KL++ +
Sbjct: 8 AGYDRAITVFSPDGRLFQVNYAREAVKRGA-TAVGVKWKDGVVLAVEKRITSKLIEPSSY 66
Query: 67 THLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIADKSQVYT 126
+F I ++ +G ADAR LV +AR EA YR +G +P+ VL + I D Q +T
Sbjct: 67 EKIFLIDDHIAAAPSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQAHT 126
Query: 127 QHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 186
Q+ +RP G ++ G++E+ P+L++ DP+G +F KA + G A+ E+ ++D
Sbjct: 127 QYGGVRPFGAALLMAGVNEK--PELFETDPSGAYFEWKAVAIGSGRNTAMAIFEEHYRDD 184
Query: 187 PAFSYEETVQTAVSALQSVLQEDFKATEIEVGVVRSDDRVFRVLSSEEIDEHLTAI 242
++ ++ A+ AL L+E A IEV + D++ ++ L EE++++L I
Sbjct: 185 --IGKDDAIKLAILALAKTLEEP-TAEGIEVAYITMDEKRWKKLPREELEKYLNEI 237
>sp|Q5JIU9|PSA_PYRKO Proteasome subunit alpha OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=psmA PE=3 SV=1
Length = 260
Score = 157 bits (397), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 86/236 (36%), Positives = 142/236 (60%), Gaps = 6/236 (2%)
Query: 7 AGYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKVPDKLLDQTCV 66
AGYDR IT+FSP+GRLFQV YA +AVK A T++GV+ KD V + +K++ KL++ +
Sbjct: 8 AGYDRAITVFSPDGRLFQVNYAREAVKRGA-TAVGVKWKDGVVLAVEKRITSKLIEPSSY 66
Query: 67 THLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIADKSQVYT 126
+F I ++ +G ADAR LV +AR EA YR +G +P+ VL + I D Q +T
Sbjct: 67 EKIFLIDDHIAAAPSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQAHT 126
Query: 127 QHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 186
Q+ +RP G ++ G++E+ P+L++ DP+G +F KA + G A+ E+ ++D
Sbjct: 127 QYGGVRPFGAALLMAGVNEK--PELFETDPSGAYFEWKAVAIGSGRNTAMAIFEEHYRDD 184
Query: 187 PAFSYEETVQTAVSALQSVLQEDFKATEIEVGVVRSDDRVFRVLSSEEIDEHLTAI 242
++ ++ A+ AL L+E A IEV + D++ ++ L EE+++++ I
Sbjct: 185 --IGKDDAIKLAILALAKTLEEP-TAEGIEVAYITMDEKRWKKLPREELEKYINEI 237
>sp|Q9UXC6|PSA_SULSO Proteasome subunit alpha OS=Sulfolobus solfataricus (strain ATCC
35092 / DSM 1617 / JCM 11322 / P2) GN=psmA PE=3 SV=1
Length = 241
Score = 155 bits (392), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/242 (36%), Positives = 143/242 (59%), Gaps = 7/242 (2%)
Query: 1 MSRGSGA-GYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKVPDK 59
M+ G A GYDR ITIFSP+G L+QV+YAF+AVK T+IG++ K SV + ++K+
Sbjct: 1 MAFGPAAMGYDRAITIFSPDGSLYQVDYAFEAVK-KGWTAIGIKSKSSVVIASEKRKAQS 59
Query: 60 LLDQTCVTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIA 119
LLD + +F I ++G G +D R L+ ARN A ++R + + +D L++ +A
Sbjct: 60 LLDVDSIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVA 119
Query: 120 DKSQVYTQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFL 179
D Q+YTQH +RP GV ++ GID+ P+L+ +P+G + ++A + G A FL
Sbjct: 120 DVKQMYTQHGGVRPFGVALVIAGIDKSV-PKLFMTEPSGQYMPYQAVAIGQGYYTATEFL 178
Query: 180 EKKMKNDPAFSYEETVQTAVSALQSVLQEDFKAT--EIEVGVVRSDDRVFRVLSSEEIDE 237
EK K D + EET+ A+ AL + L+ + K T +E+G + +F +++E+ +
Sbjct: 179 EKNYKED--LNVEETILLALKALSATLKPNEKLTPNTVEIGYASTQTGLFLKMTNEDKNM 236
Query: 238 HL 239
+L
Sbjct: 237 YL 238
>sp|C3NEC6|PSA_SULIY Proteasome subunit alpha OS=Sulfolobus islandicus (strain Y.G.57.14
/ Yellowstone #1) GN=psmA PE=3 SV=1
Length = 241
Score = 155 bits (392), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/242 (36%), Positives = 142/242 (58%), Gaps = 7/242 (2%)
Query: 1 MSRGSGA-GYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKVPDK 59
M+ G A GYDR ITIFSP+G L+QV+YAF+AVK T+IG++ K V + ++K+
Sbjct: 1 MAFGPAAMGYDRAITIFSPDGSLYQVDYAFEAVK-KGWTAIGIKSKSGVVIASEKRKAQS 59
Query: 60 LLDQTCVTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIA 119
LLD + +F I ++G G +D R L+ ARN A ++R + + +D L++ +A
Sbjct: 60 LLDVDSIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVA 119
Query: 120 DKSQVYTQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFL 179
D Q+YTQH +RP GV ++ GID+ P+LY +P+G + ++A + G A FL
Sbjct: 120 DVKQMYTQHGGVRPFGVALVIAGIDKSV-PKLYMTEPSGQYMPYQAVAIGQGYYTATEFL 178
Query: 180 EKKMKNDPAFSYEETVQTAVSALQSVLQEDFKAT--EIEVGVVRSDDRVFRVLSSEEIDE 237
EK K D + E+T+ A+ AL + L+ + K T +E+G + +F ++SE+ +
Sbjct: 179 EKNYKED--LTIEDTILLALKALSATLKPNEKLTPNTVEIGYASTQTGLFLKMTSEDKNM 236
Query: 238 HL 239
+L
Sbjct: 237 YL 238
>sp|C3NHC6|PSA_SULIN Proteasome subunit alpha OS=Sulfolobus islandicus (strain Y.N.15.51
/ Yellowstone #2) GN=psmA PE=3 SV=1
Length = 241
Score = 155 bits (392), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/242 (36%), Positives = 142/242 (58%), Gaps = 7/242 (2%)
Query: 1 MSRGSGA-GYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKVPDK 59
M+ G A GYDR ITIFSP+G L+QV+YAF+AVK T+IG++ K V + ++K+
Sbjct: 1 MAFGPAAMGYDRAITIFSPDGSLYQVDYAFEAVK-KGWTAIGIKSKSGVVIASEKRKAQS 59
Query: 60 LLDQTCVTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIA 119
LLD + +F I ++G G +D R L+ ARN A ++R + + +D L++ +A
Sbjct: 60 LLDVDSIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVA 119
Query: 120 DKSQVYTQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFL 179
D Q+YTQH +RP GV ++ GID+ P+LY +P+G + ++A + G A FL
Sbjct: 120 DVKQMYTQHGGVRPFGVALVIAGIDKSV-PKLYMTEPSGQYMPYQAVAIGQGYYTATEFL 178
Query: 180 EKKMKNDPAFSYEETVQTAVSALQSVLQEDFKAT--EIEVGVVRSDDRVFRVLSSEEIDE 237
EK K D + E+T+ A+ AL + L+ + K T +E+G + +F ++SE+ +
Sbjct: 179 EKNYKED--LTIEDTILLALKALSATLKPNEKLTPNTVEIGYASTQTGLFLKMTSEDKNM 236
Query: 238 HL 239
+L
Sbjct: 237 YL 238
>sp|C3MVG1|PSA_SULIM Proteasome subunit alpha OS=Sulfolobus islandicus (strain M.14.25 /
Kamchatka #1) GN=psmA PE=3 SV=1
Length = 241
Score = 155 bits (392), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/242 (36%), Positives = 142/242 (58%), Gaps = 7/242 (2%)
Query: 1 MSRGSGA-GYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKVPDK 59
M+ G A GYDR ITIFSP+G L+QV+YAF+AVK T+IG++ K V + ++K+
Sbjct: 1 MAFGPAAMGYDRAITIFSPDGSLYQVDYAFEAVK-KGWTAIGIKSKSGVVIASEKRKAQS 59
Query: 60 LLDQTCVTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIA 119
LLD + +F I ++G G +D R L+ ARN A ++R + + +D L++ +A
Sbjct: 60 LLDVDSIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVA 119
Query: 120 DKSQVYTQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFL 179
D Q+YTQH +RP GV ++ GID+ P+LY +P+G + ++A + G A FL
Sbjct: 120 DVKQMYTQHGGVRPFGVALVIAGIDKSV-PKLYMTEPSGQYMPYQAVAIGQGYYTATEFL 178
Query: 180 EKKMKNDPAFSYEETVQTAVSALQSVLQEDFKAT--EIEVGVVRSDDRVFRVLSSEEIDE 237
EK K D + E+T+ A+ AL + L+ + K T +E+G + +F ++SE+ +
Sbjct: 179 EKNYKED--LTIEDTILLALKALSATLKPNEKLTPNTVEIGYASTQTGLFLKMTSEDKNM 236
Query: 238 HL 239
+L
Sbjct: 237 YL 238
>sp|C3MQ43|PSA_SULIL Proteasome subunit alpha OS=Sulfolobus islandicus (strain L.S.2.15
/ Lassen #1) GN=psmA PE=3 SV=1
Length = 241
Score = 155 bits (392), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/242 (36%), Positives = 142/242 (58%), Gaps = 7/242 (2%)
Query: 1 MSRGSGA-GYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKVPDK 59
M+ G A GYDR ITIFSP+G L+QV+YAF+AVK T+IG++ K V + ++K+
Sbjct: 1 MAFGPAAMGYDRAITIFSPDGSLYQVDYAFEAVK-KGWTAIGIKSKSGVVIASEKRKAQS 59
Query: 60 LLDQTCVTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIA 119
LLD + +F I ++G G +D R L+ ARN A ++R + + +D L++ +A
Sbjct: 60 LLDVDSIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVA 119
Query: 120 DKSQVYTQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFL 179
D Q+YTQH +RP GV ++ GID+ P+LY +P+G + ++A + G A FL
Sbjct: 120 DVKQMYTQHGGVRPFGVALVIAGIDKSV-PKLYMTEPSGQYMPYQAVAIGQGYYTATEFL 178
Query: 180 EKKMKNDPAFSYEETVQTAVSALQSVLQEDFKAT--EIEVGVVRSDDRVFRVLSSEEIDE 237
EK K D + E+T+ A+ AL + L+ + K T +E+G + +F ++SE+ +
Sbjct: 179 EKNYKED--LTIEDTILLALKALSATLKPNEKLTPNTVEIGYASTQTGLFLKMTSEDKNM 236
Query: 238 HL 239
+L
Sbjct: 237 YL 238
>sp|C4KHD9|PSA_SULIK Proteasome subunit alpha OS=Sulfolobus islandicus (strain M.16.4 /
Kamchatka #3) GN=psmA PE=3 SV=1
Length = 241
Score = 155 bits (392), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/242 (36%), Positives = 142/242 (58%), Gaps = 7/242 (2%)
Query: 1 MSRGSGA-GYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKVPDK 59
M+ G A GYDR ITIFSP+G L+QV+YAF+AVK T+IG++ K V + ++K+
Sbjct: 1 MAFGPAAMGYDRAITIFSPDGSLYQVDYAFEAVK-KGWTAIGIKSKSGVVIASEKRKAQS 59
Query: 60 LLDQTCVTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIA 119
LLD + +F I ++G G +D R L+ ARN A ++R + + +D L++ +A
Sbjct: 60 LLDVDSIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVA 119
Query: 120 DKSQVYTQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFL 179
D Q+YTQH +RP GV ++ GID+ P+LY +P+G + ++A + G A FL
Sbjct: 120 DVKQMYTQHGGVRPFGVALVIAGIDKSV-PKLYMTEPSGQYMPYQAVAIGQGYYTATEFL 178
Query: 180 EKKMKNDPAFSYEETVQTAVSALQSVLQEDFKAT--EIEVGVVRSDDRVFRVLSSEEIDE 237
EK K D + E+T+ A+ AL + L+ + K T +E+G + +F ++SE+ +
Sbjct: 179 EKNYKED--LTIEDTILLALKALSATLKPNEKLTPNTVEIGYASTQTGLFLKMTSEDKNM 236
Query: 238 HL 239
+L
Sbjct: 237 YL 238
>sp|C3N5R0|PSA_SULIA Proteasome subunit alpha OS=Sulfolobus islandicus (strain M.16.27)
GN=psmA PE=3 SV=1
Length = 241
Score = 155 bits (392), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/242 (36%), Positives = 142/242 (58%), Gaps = 7/242 (2%)
Query: 1 MSRGSGA-GYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKVPDK 59
M+ G A GYDR ITIFSP+G L+QV+YAF+AVK T+IG++ K V + ++K+
Sbjct: 1 MAFGPAAMGYDRAITIFSPDGSLYQVDYAFEAVK-KGWTAIGIKSKSGVVIASEKRKAQS 59
Query: 60 LLDQTCVTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIA 119
LLD + +F I ++G G +D R L+ ARN A ++R + + +D L++ +A
Sbjct: 60 LLDVDSIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVA 119
Query: 120 DKSQVYTQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFL 179
D Q+YTQH +RP GV ++ GID+ P+LY +P+G + ++A + G A FL
Sbjct: 120 DVKQMYTQHGGVRPFGVALVIAGIDKSV-PKLYMTEPSGQYMPYQAVAIGQGYYTATEFL 178
Query: 180 EKKMKNDPAFSYEETVQTAVSALQSVLQEDFKAT--EIEVGVVRSDDRVFRVLSSEEIDE 237
EK K D + E+T+ A+ AL + L+ + K T +E+G + +F ++SE+ +
Sbjct: 179 EKNYKED--LTIEDTILLALKALSATLKPNEKLTPNTVEIGYASTQTGLFLKMTSEDKNM 236
Query: 238 HL 239
+L
Sbjct: 237 YL 238
>sp|O26782|PSA_METTH Proteasome subunit alpha OS=Methanothermobacter thermautotrophicus
(strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
/ Delta H) GN=psmA PE=3 SV=1
Length = 248
Score = 154 bits (390), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 81/233 (34%), Positives = 138/233 (59%), Gaps = 4/233 (1%)
Query: 7 AGYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKVPDKLLDQTCV 66
AGYDR IT+FSP+GRLFQVEYA +AVK TS+GV+ K+ + +V K+ KL++ +
Sbjct: 7 AGYDRAITVFSPDGRLFQVEYAREAVK-RGTTSLGVKSKEGIVLVVDKRPTSKLVEPKSI 65
Query: 67 THLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIADKSQVYT 126
+F I +++G +G ADAR+++ +AR EA R + + V+ L++ I D Q+YT
Sbjct: 66 EKIFQIDEHIGAATSGLVADARAIIEKARLEAQINRITYNEPIRVESLAKKICDMKQMYT 125
Query: 127 QHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 186
QH +RP G ++ G++ +G +L++ DP+G +KAT+ G A+ EKK +D
Sbjct: 126 QHGGVRPFGTALIIGGVN-GRGCRLFETDPSGALIEYKATAIGAGRPAAMEEFEKKYSDD 184
Query: 187 PAFSYEETVQTAVSALQSVLQEDFKATEIEVGVVRSDDRVFRVLSSEEIDEHL 239
+ + ++ A+ A+ + +E+ V+ + D+ +R L +EI +H+
Sbjct: 185 --MNLNQAIELALDAVYEATEGKTTPESVEIAVIEAADKKYRRLPDDEIRDHV 235
>sp|Q60177|PSA_METJA Proteasome subunit alpha OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=psmA PE=1 SV=1
Length = 261
Score = 153 bits (387), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 82/228 (35%), Positives = 135/228 (59%), Gaps = 5/228 (2%)
Query: 7 AGYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKVPDKLLDQTCV 66
+ YDR IT+FSPEGRL+QVEYA +AV+ T+IG+ KD V + +++ KL+ +
Sbjct: 7 SAYDRAITVFSPEGRLYQVEYAREAVR-RGTTAIGIACKDGVVLAVDRRITSKLVKIRSI 65
Query: 67 THLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIADKSQVYT 126
+F I ++ +G ADAR L+ +AR EA YR +G E+ +++L++ I D Q YT
Sbjct: 66 EKIFQIDDHVAAATSGLVADARVLIDRARLEAQIYRLTYGEEISIEMLAKKICDIKQAYT 125
Query: 127 QHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 186
QH +RP GV ++ GID+ + +L++ DP+G +KAT+ G + LEK+ ++D
Sbjct: 126 QHGGVRPFGVSLLIAGIDKNEA-RLFETDPSGALIEYKATAIGSGRPVVMELLEKEYRDD 184
Query: 187 PAFSYEETVQTAVSALQSVLQEDFKATEIEVGVVRSDDRVFRVLSSEE 234
+ +E ++ A++AL ED K ++V ++ D F+ + EE
Sbjct: 185 --ITLDEGLELAITALTKA-NEDIKPENVDVCIITVKDAQFKKIPVEE 229
>sp|C5A2C2|PSA_THEGJ Proteasome subunit alpha OS=Thermococcus gammatolerans (strain DSM
15229 / JCM 11827 / EJ3) GN=psmA PE=3 SV=1
Length = 260
Score = 152 bits (385), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/234 (36%), Positives = 136/234 (58%), Gaps = 6/234 (2%)
Query: 7 AGYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKVPDKLLDQTCV 66
AGYDR IT+FSP+GRLFQV YA +AVK A T++GV+ K V + +K++ +L++ +
Sbjct: 8 AGYDRAITVFSPDGRLFQVNYAREAVKRGA-TAVGVKWKGGVVLAVEKRITSRLIEPSSY 66
Query: 67 THLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIADKSQVYT 126
+F I ++ +G ADAR LV +AR EA YR +G +P+ VL + I D Q +T
Sbjct: 67 EKIFQIDDHIAAAPSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQAHT 126
Query: 127 QHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 186
Q+ +RP G ++ G++E+ P+LY+ DP+G +F KA + G A+ E+ +D
Sbjct: 127 QYGGVRPFGAALLMAGVNEK--PELYETDPSGAYFEWKAVAIGSGRNTAMAIFEEHYSDD 184
Query: 187 PAFSYEETVQTAVSALQSVLQEDFKATEIEVGVVRSDDRVFRVLSSEEIDEHLT 240
E ++ A+ AL L+E IEV + D++ ++ L EE+ ++L
Sbjct: 185 --IDMEGAIKLAILALAKTLEEP-SPESIEVAYITLDEKRWKKLDKEEVAKYLN 235
>sp|Q975G5|PSA_SULTO Proteasome subunit alpha OS=Sulfolobus tokodaii (strain DSM 16993 /
JCM 10545 / NBRC 100140 / 7) GN=psmA PE=3 SV=2
Length = 242
Score = 152 bits (384), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/237 (35%), Positives = 136/237 (57%), Gaps = 6/237 (2%)
Query: 1 MSRGSGA-GYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKVPDK 59
M+ G A GYDR ITIFSP+G L+QV+YAF+AVK T++GV+ K V ++ +K+ +
Sbjct: 1 MAFGPAAMGYDRAITIFSPDGSLYQVDYAFEAVK-KGWTTLGVKTKAGVVLIGEKRKATQ 59
Query: 60 LLDQTCVTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIA 119
LLD + +F + ++G G +D R L+ AR++A ++R + + +D L++ ++
Sbjct: 60 LLDVDSIEKVFILDDHVGCSFAGLASDGRILIDYARSQALQHRLIYDEPINIDYLTKLVS 119
Query: 120 DKSQVYTQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFL 179
D Q+YTQH +RP GV ++ GID K P+L +P+G F + A + G A +
Sbjct: 120 DVKQMYTQHGGVRPFGVALIIGGIDRGKTPKLLMTEPSGQFMPYYAVAIGQGGYTATEYF 179
Query: 180 EKKMKNDPAFSYEETVQTAVSALQSVLQ--EDFKATEIEVGVVRSDDRVFRVLSSEE 234
EK + D + ++T+ + AL S L+ E + IEVG D +FR +S EE
Sbjct: 180 EKNYRED--LNMQDTILLGIRALASTLKPGEKLAPSNIEVGFADVDSGMFRKMSFEE 234
>sp|Q10KF0|PSA2_ORYSJ Proteasome subunit alpha type-2 OS=Oryza sativa subsp. japonica
GN=PAB1 PE=2 SV=1
Length = 235
Score = 152 bits (383), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 84/231 (36%), Positives = 132/231 (57%), Gaps = 5/231 (2%)
Query: 9 YDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKVPDKLLDQTCVTH 68
Y +T FSP G+L Q+E+A AV + TS+G++ + V + T+KK+P L+D+T V
Sbjct: 6 YSFSLTTFSPSGKLVQIEHALTAV-GSGQTSLGIKAANGVVIATEKKLPSILVDETSVQK 64
Query: 69 LFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIADKSQVYTQH 128
+ +T +G++ +G D R LV ++R +A +Y + +PV L R A Q +TQ
Sbjct: 65 IQSLTPNIGVVYSGMGPDFRVLVRKSRKQAQQYYRLYKETIPVTQLVRETAAVMQEFTQS 124
Query: 129 AYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPA 188
+RP GV ++ G D + GPQLY+ DP+G +F KA++ G A FLEK+ D
Sbjct: 125 GGVRPFGVSLLIAGYD-DNGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTED-- 181
Query: 189 FSYEETVQTAVSALQSVLQEDFKATEIEVGVVRSDDRVFRVLSSEEIDEHL 239
++ + TA+ L+ + A IE+G++RS DR F+VLS EI + L
Sbjct: 182 MELDDAIHTAILTLKEGYEGQISANNIEIGIIRS-DREFKVLSPAEIKDFL 231
>sp|A2YVR7|PSA2_ORYSI Proteasome subunit alpha type-2 OS=Oryza sativa subsp. indica
GN=PAB1 PE=2 SV=2
Length = 235
Score = 152 bits (383), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 84/231 (36%), Positives = 132/231 (57%), Gaps = 5/231 (2%)
Query: 9 YDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKVPDKLLDQTCVTH 68
Y +T FSP G+L Q+E+A AV + TS+G++ + V + T+KK+P L+D+T V
Sbjct: 6 YSFSLTTFSPSGKLVQIEHALTAV-GSGQTSLGIKAANGVVIATEKKLPSILVDETSVQK 64
Query: 69 LFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIADKSQVYTQH 128
+ +T +G++ +G D R LV ++R +A +Y + +PV L R A Q +TQ
Sbjct: 65 IQSLTPNIGVVYSGMGPDFRVLVRKSRKQAQQYYRLYKETIPVTQLVRETAAVMQEFTQS 124
Query: 129 AYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPA 188
+RP GV ++ G D + GPQLY+ DP+G +F KA++ G A FLEK+ D
Sbjct: 125 GGVRPFGVSLLIAGYD-DNGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTED-- 181
Query: 189 FSYEETVQTAVSALQSVLQEDFKATEIEVGVVRSDDRVFRVLSSEEIDEHL 239
++ + TA+ L+ + A IE+G++RS DR F+VLS EI + L
Sbjct: 182 MELDDAIHTAILTLKEGYEGQISANNIEIGIIRS-DREFKVLSPAEIKDFL 231
>sp|Q4JB24|PSA_SULAC Proteasome subunit alpha OS=Sulfolobus acidocaldarius (strain ATCC
33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
GN=psmA PE=3 SV=1
Length = 242
Score = 152 bits (383), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 87/245 (35%), Positives = 139/245 (56%), Gaps = 6/245 (2%)
Query: 1 MSRGSGA-GYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKVPDK 59
M+ G A GYDR ITIFSP+G L+QV+YAF+AVK T++GV+ K V ++ +K+ +
Sbjct: 1 MALGPAAMGYDRAITIFSPDGSLYQVDYAFEAVK-RGWTTLGVKTKSGVVLLAEKRKATQ 59
Query: 60 LLDQTCVTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIA 119
LLD + +F + ++G G +D R L+ AR++A ++R + + ++ L++ I+
Sbjct: 60 LLDVDGIEKIFMLDDHVGCTFAGLASDGRILIDYARSQALQHRLIYDEPISIEYLTKVIS 119
Query: 120 DKSQVYTQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFL 179
D Q YTQH +RP GV +V GID+ K P+L +P+G F + A + G A +L
Sbjct: 120 DVKQAYTQHGGVRPFGVALIVGGIDKGKQPKLLMTEPSGQFMPYYAVAIGQGGYTATEYL 179
Query: 180 EKKMKNDPAFSYEETVQTAVSALQSVLQ--EDFKATEIEVGVVRSDDRVFRVLSSEEIDE 237
EK K D + T+ A+ AL + L+ E + +E+G D F+ L++EE +
Sbjct: 180 EKNYKED--LDIQSTILLALRALMATLKPGEKLNYSSVEIGYADVDSGTFKKLTTEERSD 237
Query: 238 HLTAI 242
L I
Sbjct: 238 LLQKI 242
>sp|B8GEZ3|PSA_METPE Proteasome subunit alpha OS=Methanosphaerula palustris (strain ATCC
BAA-1556 / DSM 19958 / E1-9c) GN=psmA PE=3 SV=1
Length = 241
Score = 151 bits (382), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 79/237 (33%), Positives = 136/237 (57%), Gaps = 4/237 (1%)
Query: 8 GYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKVPDKLLDQTCVT 67
GYDR IT+FSP+GRL+QVEYA +AVK T++G++ D + ++ K+V KLL+ + +
Sbjct: 8 GYDRAITVFSPDGRLYQVEYAREAVK-RGTTAVGIKCNDGIVLLVDKRVNSKLLEPSSIE 66
Query: 68 HLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIADKSQVYTQ 127
+F I ++G+ ++G DARSLV +AR E+ R + ++ V++LS+ + D Q YTQ
Sbjct: 67 KIFKIDNHIGVASSGLVGDARSLVDRARVESQVNRVSYDEQIDVEMLSKKLCDHMQTYTQ 126
Query: 128 HAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDP 187
RP G ++ GI + + +L++ DP+G +KAT G+ + E++ +P
Sbjct: 127 FGGARPYGTALLIAGISDGQ-FRLFETDPSGTLLEYKATGIGIGRNAVMKVFEEEY--NP 183
Query: 188 AFSYEETVQTAVSALQSVLQEDFKATEIEVGVVRSDDRVFRVLSSEEIDEHLTAISE 244
S + + + AL + + F +E+GVV +D FR +S +E+ + I +
Sbjct: 184 EASIRDAILLGLKALHAATEGKFDVNTVEIGVVNNDTPAFRKMSRQEVASFVEQIEQ 240
>sp|A4FZT6|PSA_METM5 Proteasome subunit alpha OS=Methanococcus maripaludis (strain C5 /
ATCC BAA-1333) GN=psmA PE=3 SV=1
Length = 259
Score = 151 bits (382), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 84/237 (35%), Positives = 137/237 (57%), Gaps = 5/237 (2%)
Query: 6 GAGYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKVPDKLLDQTC 65
+GYDR ITIFSPEGRL+QVEYA +AV+ T++G++ KD V + +++ KL+D +
Sbjct: 7 ASGYDRAITIFSPEGRLYQVEYAREAVR-RGTTAVGIKCKDGVVLAVDRRITSKLIDVSS 65
Query: 66 VTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIADKSQVY 125
+ +F I ++ +G ADAR L+ +AR EA R +G + V+ L++ I D Q Y
Sbjct: 66 IEKIFQIDDHIVAATSGLVADARVLIDRARLEAQMNRISYGEAITVEALAKKICDIKQAY 125
Query: 126 TQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKN 185
TQH RP G+ ++ GID +L++ DP+G +KAT+ G A+ LE K
Sbjct: 126 TQHGGARPFGLALLITGIDRHSA-RLFETDPSGALIEYKATAIGSGRPIAMEVLESKYSE 184
Query: 186 DPAFSYEETVQTAVSALQSVLQEDFKATEIEVGVVRSDDRVFRVLSSEEIDEHLTAI 242
D + E ++ A+ AL S E+ K I++ +V+ ++ +S +EI++ + A+
Sbjct: 185 D--MTVNEGMELALYAL-SKTTEELKPENIDMAIVKDSGKLVEKISVDEIEKIVKAV 238
>sp|O23708|PSA2A_ARATH Proteasome subunit alpha type-2-A OS=Arabidopsis thaliana GN=PAB1
PE=1 SV=1
Length = 235
Score = 151 bits (381), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 83/234 (35%), Positives = 135/234 (57%), Gaps = 5/234 (2%)
Query: 9 YDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKVPDKLLDQTCVTH 68
Y +T FSP G+L Q+E+A AV + TS+G++ + V + T+KK+P L+D+ V
Sbjct: 6 YSFSLTTFSPSGKLVQIEHALTAV-GSGQTSLGIKASNGVVIATEKKLPSILVDEASVQK 64
Query: 69 LFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIADKSQVYTQH 128
+ +T +G++ +G D R LV ++R +A +Y + +PV L R A Q +TQ
Sbjct: 65 IQHLTPNIGVVYSGMGPDFRVLVRKSRKQAEQYLRLYKEPIPVTQLVRETATVMQEFTQS 124
Query: 129 AYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPA 188
+RP GV +V G D +KGPQLY+ DP+G +F KA++ G A FLEK+ D
Sbjct: 125 GGVRPFGVSLLVAGYD-DKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTED-- 181
Query: 189 FSYEETVQTAVSALQSVLQEDFKATEIEVGVVRSDDRVFRVLSSEEIDEHLTAI 242
++ + TA+ L+ + + + IE+G + + D+VFRVL+ EID++L +
Sbjct: 182 MELDDAIHTAILTLKEGFEGEISSKNIEIGKIGA-DKVFRVLTPAEIDDYLAEV 234
>sp|A6VIP0|PSA_METM7 Proteasome subunit alpha OS=Methanococcus maripaludis (strain C7 /
ATCC BAA-1331) GN=psmA PE=3 SV=1
Length = 259
Score = 150 bits (380), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 84/237 (35%), Positives = 137/237 (57%), Gaps = 5/237 (2%)
Query: 6 GAGYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKVPDKLLDQTC 65
+GYDR ITIFSPEGRL+QVEYA +AV+ T++G++ KD V + +++ KL+D +
Sbjct: 7 ASGYDRAITIFSPEGRLYQVEYAREAVR-RGTTAVGIKCKDGVVLAVDRRITSKLIDVSS 65
Query: 66 VTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIADKSQVY 125
+ +F I ++ +G ADAR L+ +AR EA R +G + V+ L++ I D Q Y
Sbjct: 66 IEKIFQIDDHIVAATSGLVADARVLIDRARLEAQMNRISYGEAITVEALAKKICDIKQAY 125
Query: 126 TQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKN 185
TQH RP G+ ++ GID +L++ DP+G +KAT+ G A+ LE K
Sbjct: 126 TQHGGARPFGLALLITGIDRHSA-RLFETDPSGALIEYKATAIGSGRPIAMEVLESKY-- 182
Query: 186 DPAFSYEETVQTAVSALQSVLQEDFKATEIEVGVVRSDDRVFRVLSSEEIDEHLTAI 242
D + E ++ A+ AL S E+ K I++ +V+ ++ +S +EI++ + A+
Sbjct: 183 DENMTVNEGMELALYAL-SKTTEELKPENIDMAIVKDSGKLVEKISVDEIEKIVKAV 238
>sp|Q97BZ8|PSA_THEVO Proteasome subunit alpha OS=Thermoplasma volcanium (strain ATCC
51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1) GN=psmA
PE=3 SV=2
Length = 233
Score = 150 bits (380), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 91/241 (37%), Positives = 145/241 (60%), Gaps = 10/241 (4%)
Query: 1 MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKVPDKL 60
M +G A YDR IT+FSP+GRLFQVEYA +AVK + T++G++ + V +++ KK+ KL
Sbjct: 1 MQQGQMA-YDRAITVFSPDGRLFQVEYAREAVKKGS-TALGLKFSNGVLLISDKKIRSKL 58
Query: 61 LDQTCVTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIAD 120
++Q + + I Y+ + +G ADAR L+ AR A + + +G + ++ L + +AD
Sbjct: 59 IEQNSLEKIQLIDDYVAAVTSGLVADARVLIDFARISAQQEKVTYGSLVNIENLVKRVAD 118
Query: 121 KSQVYTQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLE 180
+ Q YTQ+ +RP GV + GID + GP+L+ CDPAG +KAT+ G + ++FLE
Sbjct: 119 QMQQYTQYGGVRPYGVSLIFAGID-QIGPRLFDCDPAGTINEYKATAIGSGKDAVVSFLE 177
Query: 181 KKMKNDPAFSYEETVQTAVSALQSVLQ--EDFKATEIEVGVVRSDDRVFRVLSSEEIDEH 238
K+ K S +E V + AL++ L+ E+ KA EI V S +R+ +EE+ +
Sbjct: 178 KEYKE--GLSEKEAVTLGIKALKASLEEGEELKAPEIASITVGSK---YRIYGAEEVKKF 232
Query: 239 L 239
L
Sbjct: 233 L 233
>sp|B6YSH9|PSA_THEON Proteasome subunit alpha OS=Thermococcus onnurineus (strain NA1)
GN=psmA PE=3 SV=1
Length = 260
Score = 150 bits (380), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 83/233 (35%), Positives = 135/233 (57%), Gaps = 6/233 (2%)
Query: 7 AGYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKVPDKLLDQTCV 66
AGYDR IT+FSP+GRLFQV YA +AVK A T++GV+ K+ V + +K++ KL++ +
Sbjct: 8 AGYDRAITVFSPDGRLFQVNYAREAVKRGA-TAVGVKWKEGVVLAVEKRITSKLIEPSSY 66
Query: 67 THLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIADKSQVYT 126
+F I ++ +G ADAR LV +AR EA YR +G +P+ VL + I D Q +T
Sbjct: 67 EKIFQIDDHIAAAPSGIIADARVLVDRARLEAQVYRLTYGEPVPLTVLVKKICDLKQAHT 126
Query: 127 QHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 186
Q+ +RP G ++ G++++ P+LY+ DP+G +F +A + G A+ E +D
Sbjct: 127 QYGGVRPFGAALLMAGVNDK--PELYETDPSGAYFEWRAVAIGSGRNTAMAIFEDHYSDD 184
Query: 187 PAFSYEETVQTAVSALQSVLQEDFKATEIEVGVVRSDDRVFRVLSSEEIDEHL 239
E ++ A+ AL L+E IEV + D+ ++ + EE+ ++L
Sbjct: 185 --LDMEGAIKLAILALAKTLEEP-SPESIEVAYITMKDKRWKKMDKEEVAKYL 234
>sp|Q8L4A7|PSA2B_ARATH Proteasome subunit alpha type-2-B OS=Arabidopsis thaliana GN=PAB2
PE=1 SV=1
Length = 235
Score = 150 bits (379), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 83/234 (35%), Positives = 134/234 (57%), Gaps = 5/234 (2%)
Query: 9 YDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKVPDKLLDQTCVTH 68
Y +T FSP G+L Q+E+A AV + TS+G++ + V + T+KK+P L+D+ V
Sbjct: 6 YSFSLTTFSPSGKLVQIEHALTAV-GSGQTSLGIKASNGVVIATEKKLPSILVDEASVQK 64
Query: 69 LFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIADKSQVYTQH 128
+ +T +G + +G D R LV ++R +A +Y + +PV L R A Q +TQ
Sbjct: 65 IQHLTPNIGTVYSGMGPDFRVLVRKSRKQAEQYLRLYKEPIPVTQLVRETATVMQEFTQS 124
Query: 129 AYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPA 188
+RP GV +V G D +KGPQLY+ DP+G +F KA++ G A FLEK+ D
Sbjct: 125 GGVRPFGVSLLVAGYD-DKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTED-- 181
Query: 189 FSYEETVQTAVSALQSVLQEDFKATEIEVGVVRSDDRVFRVLSSEEIDEHLTAI 242
++ + TA+ L+ + + + IE+G + + D+VFRVL+ EID++L +
Sbjct: 182 MELDDAIHTAILTLKEGFEGEISSKNIEIGKIGT-DKVFRVLTPAEIDDYLAEV 234
>sp|A5UJS2|PSA_METS3 Proteasome subunit alpha OS=Methanobrevibacter smithii (strain PS /
ATCC 35061 / DSM 861) GN=psmA PE=3 SV=1
Length = 250
Score = 150 bits (378), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 80/229 (34%), Positives = 135/229 (58%), Gaps = 4/229 (1%)
Query: 7 AGYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKVPDKLLDQTCV 66
AGYDR IT+FSP+GRLFQVEYA +AVK TSIG++ + + + K+ L++ T +
Sbjct: 7 AGYDRAITVFSPDGRLFQVEYAREAVK-RGTTSIGIKCSEGIVLAVDKRTTSNLVEATSI 65
Query: 67 THLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIADKSQVYT 126
+F I +++G +G ADAR+LV +AR EA + + + VD LS+ + D Q+YT
Sbjct: 66 EKIFKIDEHIGAATSGLVADARALVERARVEAQINKITYSEPIRVDSLSKKLCDMLQMYT 125
Query: 127 QHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 186
Q+ +RP G A+++G + +L++ DP+G +KAT+ G A++ E + K+D
Sbjct: 126 QNGGVRPFG-SALIIGGVYDGICKLFETDPSGALIEYKATAIGSGRSAAMDIFEDQYKDD 184
Query: 187 PAFSYEETVQTAVSALQSVLQEDFKATEIEVGVVRSDDRVFRVLSSEEI 235
+ E + A++A+ + + A +E+ V++ + V+ LS EE+
Sbjct: 185 --MNLNEAINLALTAINEATEHETTANNVEIAVIKCGEEVYTKLSQEEV 231
>sp|Q6L0W3|PSA_PICTO Proteasome subunit alpha OS=Picrophilus torridus (strain ATCC
700027 / DSM 9790 / JCM 10055 / NBRC 100828) GN=psmA
PE=3 SV=1
Length = 234
Score = 150 bits (378), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 85/240 (35%), Positives = 145/240 (60%), Gaps = 6/240 (2%)
Query: 1 MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKVPDKL 60
M +G A YDR IT+FSP+GRLFQVEYA +AVK + T++G++ KD V ++++KKV +L
Sbjct: 1 MQQGQMA-YDRAITVFSPDGRLFQVEYAREAVKKGS-TALGIKFKDGVALISEKKVRSRL 58
Query: 61 LDQTCVTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIAD 120
+++T + + I + + +G ADAR L+ AR + + +G M ++ L + +AD
Sbjct: 59 VEKTSLEKIQLIDDRVAAVTSGLVADARVLIDFARISDQQEKVTYGSLMNIENLVKRVAD 118
Query: 121 KSQVYTQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLE 180
+ Q YTQ+ +RP GV + G+D GP+L+ CDPAG +K S G + + +LE
Sbjct: 119 QMQQYTQYGGVRPYGVSIIFAGLD-SIGPRLFDCDPAGTINEYKCVSIGAGKDQVTAYLE 177
Query: 181 KKMKNDPAFSYEETVQTAVSALQSVLQEDFKATEIEVGVVRSDDRVFRVLSSEEIDEHLT 240
K+ K + S +E ++ ++AL+S + ++ E E+ ++ + F V +SEE+ ++L
Sbjct: 178 KEYKEN--LSEDEAIRMGIAALKSAVADESSMKEPEIASIKMGE-TFHVFTSEEVSKYLN 234
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.133 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89,197,319
Number of Sequences: 539616
Number of extensions: 3563419
Number of successful extensions: 8997
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 200
Number of HSP's successfully gapped in prelim test: 86
Number of HSP's that attempted gapping in prelim test: 8405
Number of HSP's gapped (non-prelim): 288
length of query: 246
length of database: 191,569,459
effective HSP length: 114
effective length of query: 132
effective length of database: 130,053,235
effective search space: 17167027020
effective search space used: 17167027020
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)