BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025893
(246 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 129 bits (324), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/213 (36%), Positives = 118/213 (55%), Gaps = 21/213 (9%)
Query: 45 QAVKVQPIEVPAISVDELKEITENFGTNAL------IGEGSYGRVYYGILKSGHAAAIKK 98
++++V + S ELK +T NF + +GEG +G VY G + + A+KK
Sbjct: 3 KSLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNT-TVAVKK 61
Query: 99 LDA-----SKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDIL 153
L A +++ ++F ++ ++++ +HEN V+LLG+ DG L Y + NGSL D L
Sbjct: 62 LAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL 121
Query: 154 HGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVA 213
G P LSW R KIA GAA G+ +LHE H IHRDIKS+N+L+ + A
Sbjct: 122 SCLDGT------PPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTA 172
Query: 214 KIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
KI+DF L+ + A + +R++GT Y APE
Sbjct: 173 KISDFGLARASEKFAQTVMXSRIVGTTAYMAPE 205
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 129 bits (323), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/213 (36%), Positives = 117/213 (54%), Gaps = 21/213 (9%)
Query: 45 QAVKVQPIEVPAISVDELKEITENFGTNAL------IGEGSYGRVYYGILKSGHAAAIKK 98
++++V + S ELK +T NF + +GEG +G VY G + + A+KK
Sbjct: 3 KSLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNT-TVAVKK 61
Query: 99 LDA-----SKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDIL 153
L A +++ ++F ++ ++++ +HEN V+LLG+ DG L Y + NGSL D L
Sbjct: 62 LAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL 121
Query: 154 HGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVA 213
G P LSW R KIA GAA G+ +LHE H IHRDIKS+N+L+ + A
Sbjct: 122 SCLDGT------PPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTA 172
Query: 214 KIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
KI+DF L+ + A + R++GT Y APE
Sbjct: 173 KISDFGLARASEKFAQTVMXXRIVGTTAYMAPE 205
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 128 bits (322), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 112/196 (57%), Gaps = 8/196 (4%)
Query: 53 EVPAISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQP--DEEFL 110
++ S+ EL+ ++NF ++G G +G+VY G L G A+K+L + + +F
Sbjct: 24 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQ 83
Query: 111 AQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSW 170
+V M+S H N ++L G+C+ T R+L Y + +NGS+ L R + P L W
Sbjct: 84 TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRER-----PESQPPLDW 138
Query: 171 QQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAAR 230
+R +IA+G+A+GL YLH+ DP IIHRD+K++N+L+ ++ A + DF L+ + D
Sbjct: 139 PKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA-KLMDYKDX 197
Query: 231 LHSTRVLGTFGYHAPE 246
V GT G+ APE
Sbjct: 198 HVXXAVRGTIGHIAPE 213
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 127 bits (320), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 77/202 (38%), Positives = 112/202 (55%), Gaps = 21/202 (10%)
Query: 56 AISVDELKEITENFGTNAL------IGEGSYGRVYYGILKSGHAAAIKKLDA-----SKQ 104
+ S ELK +T NF + +GEG +G VY G + + A+KKL A +++
Sbjct: 8 SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNT-TVAVKKLAAMVDITTEE 66
Query: 105 PDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQP 164
++F ++ ++++ +HEN V+LLG+ DG L Y + NGSL D L G
Sbjct: 67 LKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT----- 121
Query: 165 GPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQA 224
P LSW R KIA GAA G+ +LHE H IHRDIKS+N+L+ + AKI+DF L+ +
Sbjct: 122 -PPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARAS 177
Query: 225 PDMAARLHSTRVLGTFGYHAPE 246
A + R++GT Y APE
Sbjct: 178 EKFAQXVMXXRIVGTTAYMAPE 199
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 126 bits (317), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/202 (38%), Positives = 111/202 (54%), Gaps = 21/202 (10%)
Query: 56 AISVDELKEITENFGTNAL------IGEGSYGRVYYGILKSGHAAAIKKLDA-----SKQ 104
+ S ELK +T NF + GEG +G VY G + + A+KKL A +++
Sbjct: 5 SFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNT-TVAVKKLAAMVDITTEE 63
Query: 105 PDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQP 164
++F ++ + ++ +HEN V+LLG+ DG L Y + NGSL D L G
Sbjct: 64 LKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGT----- 118
Query: 165 GPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQA 224
P LSW R KIA GAA G+ +LHE H IHRDIKS+N+L+ + AKI+DF L+ +
Sbjct: 119 -PPLSWHXRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARAS 174
Query: 225 PDMAARLHSTRVLGTFGYHAPE 246
A + +R++GT Y APE
Sbjct: 175 EKFAQXVXXSRIVGTTAYXAPE 196
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 126 bits (316), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 113/197 (57%), Gaps = 9/197 (4%)
Query: 51 PIEVPAISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDA-SKQPDEEF 109
P E + + +L+E T NF LIG G +G+VY G+L+ G A+K+ S Q EEF
Sbjct: 23 PFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEF 82
Query: 110 LAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLS 169
++ +S +H + V L+G+C + +L Y++ NG+L L+G P +S
Sbjct: 83 ETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYG-----SDLPTMSMS 137
Query: 170 WQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAA 229
W+QR++I +GAA+GL YLH +A IIHRD+KS N+L+ ++ V KI DF +S + ++
Sbjct: 138 WEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELGQ 194
Query: 230 RLHSTRVLGTFGYHAPE 246
V GT GY PE
Sbjct: 195 THLXXVVKGTLGYIDPE 211
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 126 bits (316), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 111/196 (56%), Gaps = 8/196 (4%)
Query: 53 EVPAISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQP--DEEFL 110
++ S+ EL+ ++NF ++G G +G+VY G L G A+K+L + + +F
Sbjct: 16 QLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQ 75
Query: 111 AQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSW 170
+V M+S H N ++L G+C+ T R+L Y + +NGS+ L R + P L W
Sbjct: 76 TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRER-----PESQPPLDW 130
Query: 171 QQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAAR 230
+R +IA+G+A+GL YLH+ DP IIHRD+K++N+L+ ++ A + DF L+ + D
Sbjct: 131 PKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA-KLMDYKDX 189
Query: 231 LHSTRVLGTFGYHAPE 246
V G G+ APE
Sbjct: 190 HVXXAVRGXIGHIAPE 205
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 125 bits (314), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 113/197 (57%), Gaps = 9/197 (4%)
Query: 51 PIEVPAISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKK-LDASKQPDEEF 109
P E + + +L+E T NF LIG G +G+VY G+L+ G A+K+ S Q EEF
Sbjct: 23 PFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEF 82
Query: 110 LAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLS 169
++ +S +H + V L+G+C + +L Y++ NG+L L+G P +S
Sbjct: 83 ETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYG-----SDLPTMSMS 137
Query: 170 WQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAA 229
W+QR++I +GAA+GL YLH +A IIHRD+KS N+L+ ++ V KI DF +S + ++
Sbjct: 138 WEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQ 194
Query: 230 RLHSTRVLGTFGYHAPE 246
V GT GY PE
Sbjct: 195 THLXXVVKGTLGYIDPE 211
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 89/188 (47%), Gaps = 32/188 (17%)
Query: 74 LIGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSR-------LKHENFVQ 126
+IG G +G+VY G A+K A PDE+ + V + LKH N +
Sbjct: 14 IIGIGGFGKVYRAFW-IGDEVAVKA--ARHDPDEDISQTIENVRQEAKLFAMLKHPNIIA 70
Query: 127 LLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEY 186
L G C+ + L EFA G L+ +L G++ P +++W AV A+G+ Y
Sbjct: 71 LRGVCLKEPNLCLVMEFARGGPLNRVLSGKR----IPPDILVNW------AVQIARGMNY 120
Query: 187 LHEKADPHIIHRDIKSSNVLI--------FDDDVAKIADFDLSNQAPDMAARLHSTRVLG 238
LH++A IIHRD+KSSN+LI + + KI DF L+ + R G
Sbjct: 121 LHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLARE----WHRTTKMSAAG 176
Query: 239 TFGYHAPE 246
+ + APE
Sbjct: 177 AYAWMAPE 184
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 84.0 bits (206), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 90/175 (51%), Gaps = 13/175 (7%)
Query: 75 IGEGSYGRVYYGILKSGHAAAIKKL---DASKQPDEEFLAQVSMVSRLKHENFVQLLGYC 131
IG GS+G V+ G A+K L D + EFL +V+++ RL+H N V +G
Sbjct: 45 IGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 132 VDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKA 191
+ + E+ S GSL+ +LH + G + L ++R+ +A AKG+ YLH +
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLH-KSGAREQ-----LDERRRLSMAYDVAKGMNYLHNR- 156
Query: 192 DPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
+P I+HRD+KS N+L+ K+ DF LS + L S GT + APE
Sbjct: 157 NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLK--ASXFLXSKXAAGTPEWMAPE 209
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 90/175 (51%), Gaps = 13/175 (7%)
Query: 75 IGEGSYGRVYYGILKSGHAAAIKKL---DASKQPDEEFLAQVSMVSRLKHENFVQLLGYC 131
IG GS+G V+ G A+K L D + EFL +V+++ RL+H N V +G
Sbjct: 45 IGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 132 VDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKA 191
+ + E+ S GSL+ +LH + G + L ++R+ +A AKG+ YLH +
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLH-KSGAREQ-----LDERRRLSMAYDVAKGMNYLHNR- 156
Query: 192 DPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
+P I+HR++KS N+L+ K+ DF LS + L S GT + APE
Sbjct: 157 NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLK--ASTFLSSKSAAGTPEWMAPE 209
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 76/152 (50%), Gaps = 11/152 (7%)
Query: 75 IGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDG 134
IG G +G V+ G + AIK + +E+F+ + ++ +L H VQL G C++
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 72
Query: 135 TSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPH 194
L +EF +G L D L ++G+ A + + + + +G+ YL E
Sbjct: 73 APICLVFEFMEHGCLSDYLRTQRGLFAA--------ETLLGMCLDVCEGMAYLEEAC--- 121
Query: 195 IIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
+IHRD+ + N L+ ++ V K++DF ++ D
Sbjct: 122 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLD 153
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 76/152 (50%), Gaps = 11/152 (7%)
Query: 75 IGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDG 134
IG G +G V+ G + AIK + +E+F+ + ++ +L H VQL G C++
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 77
Query: 135 TSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPH 194
L +EF +G L D L ++G+ A + + + + +G+ YL E
Sbjct: 78 APICLVFEFMEHGCLSDYLRTQRGLFAA--------ETLLGMCLDVCEGMAYLEEAC--- 126
Query: 195 IIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
+IHRD+ + N L+ ++ V K++DF ++ D
Sbjct: 127 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLD 158
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 76/152 (50%), Gaps = 11/152 (7%)
Query: 75 IGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDG 134
IG G +G V+ G + AIK + +E+F+ + ++ +L H VQL G C++
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 74
Query: 135 TSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPH 194
L +EF +G L D L ++G+ A + + + + +G+ YL E
Sbjct: 75 APICLVFEFMEHGCLSDYLRTQRGLFAA--------ETLLGMCLDVCEGMAYLEEAC--- 123
Query: 195 IIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
+IHRD+ + N L+ ++ V K++DF ++ D
Sbjct: 124 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLD 155
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 77/152 (50%), Gaps = 11/152 (7%)
Query: 75 IGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDG 134
IG G +G V+ G + AIK + +E+F+ + ++ +L H VQL G C++
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 74
Query: 135 TSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPH 194
L +EF +G L D L ++G+ A + + + + +G+ YL E +
Sbjct: 75 APICLVFEFMEHGCLSDYLRTQRGLFAA--------ETLLGMCLDVCEGMAYLEEAS--- 123
Query: 195 IIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
+IHRD+ + N L+ ++ V K++DF ++ D
Sbjct: 124 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLD 155
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 76/150 (50%), Gaps = 15/150 (10%)
Query: 75 IGEGSYGRVYYGILKS-GHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVD 133
+G G YG VY G+ K A+K L EEFL + +++ +KH N VQLLG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 134 GTSRVLAYEFASNGSLHDILH--GRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKA 191
+ EF + G+L D L R+ V VL + +A + +EYL +K
Sbjct: 86 EPPFYIIIEFMTYGNLLDYLRECNRQEVNAV----VL-----LYMATQISSAMEYLEKK- 135
Query: 192 DPHIIHRDIKSSNVLIFDDDVAKIADFDLS 221
+ IHRD+ + N L+ ++ + K+ADF LS
Sbjct: 136 --NFIHRDLAARNCLVGENHLVKVADFGLS 163
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 76/149 (51%), Gaps = 11/149 (7%)
Query: 75 IGEGSYGRVYYGILKS-GHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVD 133
+G G YG VY G+ K A+K L EEFL + +++ +KH N VQLLG C
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 134 GTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADP 193
+ EF + G+L D L R+ + VL + +A + +EYL +K
Sbjct: 79 EPPFYIIIEFMTYGNLLDYL--RECNRQEVSAVVL-----LYMATQISSAMEYLEKK--- 128
Query: 194 HIIHRDIKSSNVLIFDDDVAKIADFDLSN 222
+ IHRD+ + N L+ ++ + K+ADF LS
Sbjct: 129 NFIHRDLAARNCLVGENHLVKVADFGLSR 157
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 76/152 (50%), Gaps = 11/152 (7%)
Query: 75 IGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDG 134
IG G +G V+ G + AIK + +++F+ + ++ +L H VQL G C++
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLEQ 94
Query: 135 TSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPH 194
L +EF +G L D L ++G+ A + + + + +G+ YL E
Sbjct: 95 APICLVFEFMEHGCLSDYLRTQRGLFAA--------ETLLGMCLDVCEGMAYLEEAC--- 143
Query: 195 IIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
+IHRD+ + N L+ ++ V K++DF ++ D
Sbjct: 144 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLD 175
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 76/150 (50%), Gaps = 15/150 (10%)
Query: 75 IGEGSYGRVYYGILKS-GHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVD 133
+G G YG VY G+ K A+K L EEFL + +++ +KH N VQLLG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 134 GTSRVLAYEFASNGSLHDILH--GRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKA 191
+ EF + G+L D L R+ V VL + +A + +EYL +K
Sbjct: 86 EPPFYIITEFMTYGNLLDYLRECNRQEVNAV----VL-----LYMATQISSAMEYLEKK- 135
Query: 192 DPHIIHRDIKSSNVLIFDDDVAKIADFDLS 221
+ IHRD+ + N L+ ++ + K+ADF LS
Sbjct: 136 --NFIHRDLAARNCLVGENHLVKVADFGLS 163
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 76/149 (51%), Gaps = 11/149 (7%)
Query: 75 IGEGSYGRVYYGILKS-GHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVD 133
+G G YG VY G+ K A+K L EEFL + +++ +KH N VQLLG C
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 134 GTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADP 193
+ EF + G+L D L R+ + VL + +A + +EYL +K
Sbjct: 79 EPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVL-----LYMATQISSAMEYLEKK--- 128
Query: 194 HIIHRDIKSSNVLIFDDDVAKIADFDLSN 222
+ IHRD+ + N L+ ++ + K+ADF LS
Sbjct: 129 NFIHRDLAARNCLVGENHLVKVADFGLSR 157
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 76/149 (51%), Gaps = 11/149 (7%)
Query: 75 IGEGSYGRVYYGILKS-GHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVD 133
+G G YG VY G+ K A+K L EEFL + +++ +KH N VQLLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 134 GTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADP 193
+ EF + G+L D L R+ + VL + +A + +EYL +K
Sbjct: 81 EPPFYIIIEFMTYGNLLDYL--RECNRQEVSAVVL-----LYMATQISSAMEYLEKK--- 130
Query: 194 HIIHRDIKSSNVLIFDDDVAKIADFDLSN 222
+ IHRD+ + N L+ ++ + K+ADF LS
Sbjct: 131 NFIHRDLAARNCLVGENHLVKVADFGLSR 159
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 76/149 (51%), Gaps = 11/149 (7%)
Query: 75 IGEGSYGRVYYGILKS-GHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVD 133
+G G YG VY G+ K A+K L EEFL + +++ +KH N VQLLG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 134 GTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADP 193
+ EF + G+L D L R+ + VL + +A + +EYL +K
Sbjct: 86 EPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVL-----LYMATQISSAMEYLEKK--- 135
Query: 194 HIIHRDIKSSNVLIFDDDVAKIADFDLSN 222
+ IHRD+ + N L+ ++ + K+ADF LS
Sbjct: 136 NFIHRDLAARNCLVGENHLVKVADFGLSR 164
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 76/151 (50%), Gaps = 15/151 (9%)
Query: 75 IGEGSYGRVYYGILKS-GHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVD 133
+G G YG VY G+ K A+K L EEFL + +++ +KH N VQLLG C
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 81
Query: 134 GTSRVLAYEFASNGSLHDILH--GRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKA 191
+ EF + G+L D L R+ V VL + +A + +EYL +K
Sbjct: 82 EPPFYIITEFMTYGNLLDYLRECNRQEVNAV----VL-----LYMATQISSAMEYLEKK- 131
Query: 192 DPHIIHRDIKSSNVLIFDDDVAKIADFDLSN 222
+ IHRD+ + N L+ ++ + K+ADF LS
Sbjct: 132 --NFIHRDLAARNCLVGENHLVKVADFGLSR 160
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 76/149 (51%), Gaps = 11/149 (7%)
Query: 75 IGEGSYGRVYYGILKS-GHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVD 133
+G G YG VY G+ K A+K L EEFL + +++ +KH N VQLLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 134 GTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADP 193
+ EF + G+L D L R+ + VL + +A + +EYL +K
Sbjct: 81 EPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVL-----LYMATQISSAMEYLEKK--- 130
Query: 194 HIIHRDIKSSNVLIFDDDVAKIADFDLSN 222
+ IHRD+ + N L+ ++ + K+ADF LS
Sbjct: 131 NFIHRDLAARNCLVGENHLVKVADFGLSR 159
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 76/150 (50%), Gaps = 15/150 (10%)
Query: 75 IGEGSYGRVYYGILKS-GHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVD 133
+G G YG VY G+ K A+K L EEFL + +++ +KH N VQLLG C
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 84
Query: 134 GTSRVLAYEFASNGSLHDILH--GRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKA 191
+ EF + G+L D L R+ V VL + +A + +EYL +K
Sbjct: 85 EPPFYIITEFMTYGNLLDYLRECNRQEVNAV----VL-----LYMATQISSAMEYLEKK- 134
Query: 192 DPHIIHRDIKSSNVLIFDDDVAKIADFDLS 221
+ IHRD+ + N L+ ++ + K+ADF LS
Sbjct: 135 --NFIHRDLAARNCLVGENHLVKVADFGLS 162
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 76/150 (50%), Gaps = 15/150 (10%)
Query: 75 IGEGSYGRVYYGILKS-GHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVD 133
+G G YG VY G+ K A+K L EEFL + +++ +KH N VQLLG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 134 GTSRVLAYEFASNGSLHDILH--GRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKA 191
+ EF + G+L D L R+ V VL + +A + +EYL +K
Sbjct: 86 EPPFYIITEFMTYGNLLDYLRECNRQEVNAV----VL-----LYMATQISSAMEYLEKK- 135
Query: 192 DPHIIHRDIKSSNVLIFDDDVAKIADFDLS 221
+ IHRD+ + N L+ ++ + K+ADF LS
Sbjct: 136 --NFIHRDLAARNCLVGENHLVKVADFGLS 163
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 76/149 (51%), Gaps = 11/149 (7%)
Query: 75 IGEGSYGRVYYGILKS-GHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVD 133
+G G YG VY G+ K A+K L EEFL + +++ +KH N VQLLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 134 GTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADP 193
+ EF + G+L D L R+ + VL + +A + +EYL +K
Sbjct: 81 EPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVL-----LYMATQISSAMEYLEKK--- 130
Query: 194 HIIHRDIKSSNVLIFDDDVAKIADFDLSN 222
+ IHRD+ + N L+ ++ + K+ADF LS
Sbjct: 131 NFIHRDLAARNCLVGENHLVKVADFGLSR 159
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 76/149 (51%), Gaps = 11/149 (7%)
Query: 75 IGEGSYGRVYYGILKS-GHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVD 133
+G G YG VY G+ K A+K L EEFL + +++ +KH N VQLLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 134 GTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADP 193
+ EF + G+L D L R+ + VL + +A + +EYL +K
Sbjct: 81 EPPFYIIIEFMTYGNLLDYL--RECNRQEVSAVVL-----LYMATQISSAMEYLEKK--- 130
Query: 194 HIIHRDIKSSNVLIFDDDVAKIADFDLSN 222
+ IHRD+ + N L+ ++ + K+ADF LS
Sbjct: 131 NFIHRDLAARNCLVGENHLVKVADFGLSR 159
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 76/151 (50%), Gaps = 15/151 (9%)
Query: 75 IGEGSYGRVYYGILKS-GHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVD 133
+G G YG VY G+ K A+K L EEFL + +++ +KH N VQLLG C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 134 GTSRVLAYEFASNGSLHDILH--GRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKA 191
+ EF + G+L D L R+ V VL + +A + +EYL +K
Sbjct: 83 EPPFYIITEFMTYGNLLDYLRECNRQEVNAV----VL-----LYMATQISSAMEYLEKK- 132
Query: 192 DPHIIHRDIKSSNVLIFDDDVAKIADFDLSN 222
+ IHRD+ + N L+ ++ + K+ADF LS
Sbjct: 133 --NFIHRDLAARNCLVGENHLVKVADFGLSR 161
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 76/151 (50%), Gaps = 15/151 (9%)
Query: 75 IGEGSYGRVYYGILKS-GHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVD 133
+G G YG VY G+ K A+K L EEFL + +++ +KH N VQLLG C
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 81
Query: 134 GTSRVLAYEFASNGSLHDILH--GRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKA 191
+ EF + G+L D L R+ V VL + +A + +EYL +K
Sbjct: 82 EPPFYIIIEFMTYGNLLDYLRECNRQEVNAV----VL-----LYMATQISSAMEYLEKK- 131
Query: 192 DPHIIHRDIKSSNVLIFDDDVAKIADFDLSN 222
+ IHRD+ + N L+ ++ + K+ADF LS
Sbjct: 132 --NFIHRDLAARNCLVGENHLVKVADFGLSR 160
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 76/151 (50%), Gaps = 15/151 (9%)
Query: 75 IGEGSYGRVYYGILKS-GHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVD 133
+G G YG VY G+ K A+K L EEFL + +++ +KH N VQLLG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 134 GTSRVLAYEFASNGSLHDILH--GRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKA 191
+ EF + G+L D L R+ V VL + +A + +EYL +K
Sbjct: 86 EPPFYIITEFMTYGNLLDYLRECNRQEVNAV----VL-----LYMATQISSAMEYLEKK- 135
Query: 192 DPHIIHRDIKSSNVLIFDDDVAKIADFDLSN 222
+ IHRD+ + N L+ ++ + K+ADF LS
Sbjct: 136 --NFIHRDLAARNCLVGENHLVKVADFGLSR 164
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 76/150 (50%), Gaps = 15/150 (10%)
Query: 75 IGEGSYGRVYYGILKS-GHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVD 133
+G G YG VY G+ K A+K L EEFL + +++ +KH N VQLLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 134 GTSRVLAYEFASNGSLHDILH--GRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKA 191
+ EF + G+L D L R+ V VL + +A + +EYL +K
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRECNRQEVNAV----VL-----LYMATQISSAMEYLEKK- 130
Query: 192 DPHIIHRDIKSSNVLIFDDDVAKIADFDLS 221
+ IHRD+ + N L+ ++ + K+ADF LS
Sbjct: 131 --NFIHRDLAARNCLVGENHLVKVADFGLS 158
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 76/150 (50%), Gaps = 15/150 (10%)
Query: 75 IGEGSYGRVYYGILKS-GHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVD 133
+G G YG VY G+ K A+K L EEFL + +++ +KH N VQLLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 134 GTSRVLAYEFASNGSLHDILH--GRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKA 191
+ EF + G+L D L R+ V VL + +A + +EYL +K
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRECNRQEVNAV----VL-----LYMATQISSAMEYLEKK- 130
Query: 192 DPHIIHRDIKSSNVLIFDDDVAKIADFDLS 221
+ IHRD+ + N L+ ++ + K+ADF LS
Sbjct: 131 --NFIHRDLAARNCLVGENHLVKVADFGLS 158
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 76/151 (50%), Gaps = 15/151 (9%)
Query: 75 IGEGSYGRVYYGILKS-GHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVD 133
+G G YG VY G+ K A+K L EEFL + +++ +KH N VQLLG C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 134 GTSRVLAYEFASNGSLHDILH--GRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKA 191
+ EF + G+L D L R+ V VL + +A + +EYL +K
Sbjct: 83 EPPFYIITEFMTYGNLLDYLRECNRQEVNAV----VL-----LYMATQISSAMEYLEKK- 132
Query: 192 DPHIIHRDIKSSNVLIFDDDVAKIADFDLSN 222
+ IHRD+ + N L+ ++ + K+ADF LS
Sbjct: 133 --NFIHRDLAARNCLVGENHLVKVADFGLSR 161
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 76/151 (50%), Gaps = 15/151 (9%)
Query: 75 IGEGSYGRVYYGILKS-GHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVD 133
+G G YG VY G+ K A+K L EEFL + +++ +KH N VQLLG C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 134 GTSRVLAYEFASNGSLHDILH--GRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKA 191
+ EF + G+L D L R+ V VL + +A + +EYL +K
Sbjct: 83 EPPFYIITEFMTYGNLLDYLRECNRQEVNAV----VL-----LYMATQISSAMEYLEKK- 132
Query: 192 DPHIIHRDIKSSNVLIFDDDVAKIADFDLSN 222
+ IHRD+ + N L+ ++ + K+ADF LS
Sbjct: 133 --NFIHRDLAARNCLVGENHLVKVADFGLSR 161
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 76/150 (50%), Gaps = 15/150 (10%)
Query: 75 IGEGSYGRVYYGILKS-GHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVD 133
+G G YG VY G+ K A+K L EEFL + +++ +KH N VQLLG C
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 93
Query: 134 GTSRVLAYEFASNGSLHDILH--GRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKA 191
+ EF + G+L D L R+ V VL + +A + +EYL +K
Sbjct: 94 EPPFYIITEFMTYGNLLDYLRECNRQEVNAV----VL-----LYMATQISSAMEYLEKK- 143
Query: 192 DPHIIHRDIKSSNVLIFDDDVAKIADFDLS 221
+ IHRD+ + N L+ ++ + K+ADF LS
Sbjct: 144 --NFIHRDLAARNCLVGENHLVKVADFGLS 171
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 76/160 (47%), Gaps = 11/160 (6%)
Query: 67 ENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQ 126
E+ +G+G +G V+ G AIK L E FL + ++ +L+HE VQ
Sbjct: 8 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ 67
Query: 127 LLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEY 186
L V + E+ S GSL D L G + G L Q V +A A G+ Y
Sbjct: 68 LYA-VVSEEPIXIVTEYMSKGSLLDFLKG-------ETGKYLRLPQLVDMAAQIASGMAY 119
Query: 187 LHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
+ + +HRD++++N+L+ ++ V K+ADF L+ D
Sbjct: 120 VERM---NYVHRDLRAANILVGENLVCKVADFGLARLIED 156
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 76/160 (47%), Gaps = 11/160 (6%)
Query: 67 ENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQ 126
E+ +G+G +G V+ G AIK L E FL + ++ +L+HE VQ
Sbjct: 11 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ 70
Query: 127 LLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEY 186
L V + E+ S GSL D L G + G L Q V +A A G+ Y
Sbjct: 71 LYA-VVSEEPIYIVTEYMSKGSLLDFLKG-------ETGKYLRLPQLVDMAAQIASGMAY 122
Query: 187 LHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
+ + +HRD++++N+L+ ++ V K+ADF L+ D
Sbjct: 123 VERM---NYVHRDLRAANILVGENLVCKVADFGLARLIED 159
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 89/197 (45%), Gaps = 14/197 (7%)
Query: 33 AYHASEAAPKGAQAVKVQPIEVP---AISVDELKEITENFGTNALIGEGSYGRVYYGILK 89
AY++ A + V P P ++ D + E+ +G+G +G V+ G
Sbjct: 147 AYYSKHADGLCHRLTTVCPTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWN 206
Query: 90 SGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSL 149
AIK L E FL + ++ +L+HE VQL V + E+ S GSL
Sbjct: 207 GTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSL 265
Query: 150 HDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFD 209
D L G + G L Q V +A A G+ Y+ + +HRD++++N+L+ +
Sbjct: 266 LDFLKG-------ETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGE 315
Query: 210 DDVAKIADFDLSNQAPD 226
+ V K+ADF L+ D
Sbjct: 316 NLVCKVADFGLARLIED 332
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 89/197 (45%), Gaps = 14/197 (7%)
Query: 33 AYHASEAAPKGAQAVKVQPIEVP---AISVDELKEITENFGTNALIGEGSYGRVYYGILK 89
AY++ A + V P P ++ D + E+ +G+G +G V+ G
Sbjct: 147 AYYSKHADGLCHRLTTVCPTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWN 206
Query: 90 SGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSL 149
AIK L E FL + ++ +L+HE VQL V + E+ S GSL
Sbjct: 207 GTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSL 265
Query: 150 HDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFD 209
D L G + G L Q V +A A G+ Y+ + +HRD++++N+L+ +
Sbjct: 266 LDFLKG-------ETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGE 315
Query: 210 DDVAKIADFDLSNQAPD 226
+ V K+ADF L+ D
Sbjct: 316 NLVCKVADFGLARLIED 332
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 86/158 (54%), Gaps = 14/158 (8%)
Query: 75 IGEGSYGRVY----YGIL--KSGHAAAIKKL-DASKQPDEEFLAQVSMVSRLKHENFVQL 127
+GEG++G+V+ Y + + A+K L DAS ++F + +++ L+HE+ V+
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 128 LGYCVDGTSRVLAYEFASNGSLHDIL--HGRKGVKGAQPGPV--LSWQQRVKIAVGAAKG 183
G CV+G ++ +E+ +G L+ L HG V A+ P L+ Q + IA A G
Sbjct: 81 YGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAG 140
Query: 184 LEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 221
+ YL A H +HRD+ + N L+ ++ + KI DF +S
Sbjct: 141 MVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMS 175
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 75/152 (49%), Gaps = 11/152 (7%)
Query: 75 IGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDG 134
IG G +G V+ G + AIK + +E+F+ + ++ +L H VQL G C++
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 75
Query: 135 TSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPH 194
L EF +G L D L ++G+ A + + + + +G+ YL E
Sbjct: 76 APICLVTEFMEHGCLSDYLRTQRGLFAA--------ETLLGMCLDVCEGMAYLEEAC--- 124
Query: 195 IIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
+IHRD+ + N L+ ++ V K++DF ++ D
Sbjct: 125 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLD 156
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 75/160 (46%), Gaps = 11/160 (6%)
Query: 67 ENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQ 126
E+ +G+G +G V+ G AIK L E FL + ++ +L+HE VQ
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ 77
Query: 127 LLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEY 186
L V + E+ S GSL D L G G P Q V +A A G+ Y
Sbjct: 78 LYA-VVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLP-------QLVDMAAQIASGMAY 129
Query: 187 LHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
+ + +HRD++++N+L+ ++ V K+ADF L+ D
Sbjct: 130 VERM---NYVHRDLRAANILVGENLVCKVADFGLARLIED 166
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 75/160 (46%), Gaps = 11/160 (6%)
Query: 67 ENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQ 126
E+ +G+G +G V+ G AIK L E FL + ++ +L+HE VQ
Sbjct: 7 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ 66
Query: 127 LLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEY 186
L V + E+ S GSL D L G G P Q V +A A G+ Y
Sbjct: 67 LYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP-------QLVDMAAQIASGMAY 118
Query: 187 LHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
+ + +HRD++++N+L+ ++ V K+ADF L+ D
Sbjct: 119 VERM---NYVHRDLRAANILVGENLVCKVADFGLARLIED 155
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 75/160 (46%), Gaps = 11/160 (6%)
Query: 67 ENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQ 126
E+ +G+G +G V+ G AIK L E FL + ++ +L+HE VQ
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ 77
Query: 127 LLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEY 186
L V + E+ S GSL D L G G P Q V +A A G+ Y
Sbjct: 78 LYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP-------QLVDMAAQIASGMAY 129
Query: 187 LHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
+ + +HRD++++N+L+ ++ V K+ADF L+ D
Sbjct: 130 VERM---NYVHRDLRAANILVGENLVCKVADFGLARLIED 166
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 75/160 (46%), Gaps = 11/160 (6%)
Query: 67 ENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQ 126
E+ +G+G +G V+ G AIK L E FL + ++ +L+HE VQ
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ 77
Query: 127 LLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEY 186
L V + E+ S GSL D L G G P Q V +A A G+ Y
Sbjct: 78 LYA-VVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLP-------QLVDMAAQIASGMAY 129
Query: 187 LHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
+ + +HRD++++N+L+ ++ V K+ADF L+ D
Sbjct: 130 VERM---NYVHRDLRAANILVGENLVCKVADFGLARLIED 166
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 89/197 (45%), Gaps = 14/197 (7%)
Query: 33 AYHASEAAPKGAQAVKVQPIEVP---AISVDELKEITENFGTNALIGEGSYGRVYYGILK 89
AY++ A + V P P ++ D + E+ +G+G +G V+ G
Sbjct: 230 AYYSKHADGLCHRLTTVCPTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWN 289
Query: 90 SGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSL 149
AIK L E FL + ++ +L+HE VQL V + E+ S GSL
Sbjct: 290 GTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSL 348
Query: 150 HDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFD 209
D L G + G L Q V +A A G+ Y+ + +HRD++++N+L+ +
Sbjct: 349 LDFLKG-------ETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGE 398
Query: 210 DDVAKIADFDLSNQAPD 226
+ V K+ADF L+ D
Sbjct: 399 NLVCKVADFGLARLIED 415
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 75/160 (46%), Gaps = 11/160 (6%)
Query: 67 ENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQ 126
E+ +G+G +G V+ G AIK L E FL + ++ +L+HE VQ
Sbjct: 9 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ 68
Query: 127 LLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEY 186
L V + E+ S GSL D L G G P Q V +A A G+ Y
Sbjct: 69 LYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP-------QLVDMAAQIASGMAY 120
Query: 187 LHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
+ + +HRD++++N+L+ ++ V K+ADF L+ D
Sbjct: 121 VERM---NYVHRDLRAANILVGENLVCKVADFGLARLIED 157
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 90/197 (45%), Gaps = 14/197 (7%)
Query: 33 AYHASEAAPKGAQAVKVQPIEVP---AISVDELKEITENFGTNALIGEGSYGRVYYGILK 89
AY++ A + V P P ++ D + E+ +G+G +G V+ G
Sbjct: 147 AYYSKHADGLCHRLTTVCPTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWN 206
Query: 90 SGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSL 149
AIK L E FL + ++ +L+HE VQL + ++ E+ S GSL
Sbjct: 207 GTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVG-EYMSKGSL 265
Query: 150 HDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFD 209
D L G + G L Q V +A A G+ Y+ + +HRD++++N+L+ +
Sbjct: 266 LDFLKG-------ETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGE 315
Query: 210 DDVAKIADFDLSNQAPD 226
+ V K+ADF L+ D
Sbjct: 316 NLVCKVADFGLARLIED 332
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 76/149 (51%), Gaps = 11/149 (7%)
Query: 75 IGEGSYGRVYYGILKS-GHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVD 133
+G G +G VY G+ K A+K L EEFL + +++ +KH N VQLLG C
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 134 GTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADP 193
+ EF + G+L D L R+ + VL + +A + +EYL +K
Sbjct: 79 EPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVL-----LYMATQISSAMEYLEKK--- 128
Query: 194 HIIHRDIKSSNVLIFDDDVAKIADFDLSN 222
+ IHRD+ + N L+ ++ + K+ADF LS
Sbjct: 129 NFIHRDLAARNCLVGENHLVKVADFGLSR 157
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 77.0 bits (188), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 75/160 (46%), Gaps = 11/160 (6%)
Query: 67 ENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQ 126
E+ +G+G +G V+ G AIK L E FL + ++ +L+HE VQ
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ 77
Query: 127 LLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEY 186
L V + E+ S GSL D L G G P Q V +A A G+ Y
Sbjct: 78 LYA-VVSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLP-------QLVDMAAQIASGMAY 129
Query: 187 LHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
+ + +HRD++++N+L+ ++ V K+ADF L+ D
Sbjct: 130 VERM---NYVHRDLRAANILVGENLVCKVADFGLARLIED 166
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 77.0 bits (188), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 96/220 (43%), Gaps = 18/220 (8%)
Query: 14 KAADNGNAYMVK----SSAGTDGAYHASEAAPKGAQAVKVQPIEVP---AISVDELKEIT 66
+ D+G Y+ SS AY++ A + V P P ++ D +
Sbjct: 125 RKLDSGGFYITSRTQFSSLQQLVAYYSKHADGLCHRLTNVCPTSKPQTQGLAKDAWEIPR 184
Query: 67 ENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQ 126
E+ +G+G +G V+ G AIK L E FL + ++ +L+HE VQ
Sbjct: 185 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEAFLQEAQVMKKLRHEKLVQ 244
Query: 127 LLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEY 186
L V + E+ S GSL D L G + G L Q V +A A G+ Y
Sbjct: 245 LYA-VVSEEPIYIVTEYMSKGSLLDFLKG-------EMGKYLRLPQLVDMAAQIASGMAY 296
Query: 187 LHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
+ + +HRD++++N+L+ ++ V K+ADF L D
Sbjct: 297 VERM---NYVHRDLRAANILVGENLVCKVADFGLGRLIED 333
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 77.0 bits (188), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 90/185 (48%), Gaps = 15/185 (8%)
Query: 63 KEITENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQPDEEFLAQVSMVSRLKH 121
K+ E F +GEGSYG VY I K +G AIK++ +E + ++S++ +
Sbjct: 25 KQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDL-QEIIKEISIMQQCDS 83
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAA 181
+ V+ G T + E+ GS+ DI+ R L+ + I
Sbjct: 84 PHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKT--------LTEDEIATILQSTL 135
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 241
KGLEYLH IHRDIK+ N+L+ + AK+ADF ++ Q D A+ + V+GT
Sbjct: 136 KGLEYLHFMRK---IHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNX--VIGTPF 190
Query: 242 YHAPE 246
+ APE
Sbjct: 191 WMAPE 195
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 77.0 bits (188), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 75/149 (50%), Gaps = 11/149 (7%)
Query: 75 IGEGSYGRVYYGILKS-GHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVD 133
+G G YG VY G+ K A+K L EEFL + +++ +KH N VQLLG C
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTL 99
Query: 134 GTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADP 193
+ E+ G+L D L R+ + VL + +A + +EYL +K
Sbjct: 100 EPPFYIVTEYMPYGNLLDYL--RECNREEVTAVVL-----LYMATQISSAMEYLEKK--- 149
Query: 194 HIIHRDIKSSNVLIFDDDVAKIADFDLSN 222
+ IHRD+ + N L+ ++ V K+ADF LS
Sbjct: 150 NFIHRDLAARNCLVGENHVVKVADFGLSR 178
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 77.0 bits (188), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 86/161 (53%), Gaps = 16/161 (9%)
Query: 74 LIGEGSYGRVYYGILKSG---HAAAIKKLD--ASKQPDEEFLAQVSMVSRL-KHENFVQL 127
+IGEG++G+V +K AAIK++ ASK +F ++ ++ +L H N + L
Sbjct: 32 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 91
Query: 128 LGYCVDGTSRVLAYEFASNGSLHDILHGRKGVK-------GAQPGPVLSWQQRVKIAVGA 180
LG C LA E+A +G+L D L + ++ LS QQ + A
Sbjct: 92 LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADV 151
Query: 181 AKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 221
A+G++YL +K IHRD+ + N+L+ ++ VAKIADF LS
Sbjct: 152 ARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLS 189
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 77.0 bits (188), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 86/161 (53%), Gaps = 16/161 (9%)
Query: 74 LIGEGSYGRVYYGILKSG---HAAAIKKLD--ASKQPDEEFLAQVSMVSRL-KHENFVQL 127
+IGEG++G+V +K AAIK++ ASK +F ++ ++ +L H N + L
Sbjct: 22 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 81
Query: 128 LGYCVDGTSRVLAYEFASNGSLHDILHGRKGVK-------GAQPGPVLSWQQRVKIAVGA 180
LG C LA E+A +G+L D L + ++ LS QQ + A
Sbjct: 82 LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADV 141
Query: 181 AKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 221
A+G++YL +K IHRD+ + N+L+ ++ VAKIADF LS
Sbjct: 142 ARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLS 179
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 97/173 (56%), Gaps = 26/173 (15%)
Query: 56 AISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIK--KLDASKQPDEEFLAQV 113
A+++ ELK + IG+G +G V G + G+ A+K K DA+ Q FLA+
Sbjct: 189 ALNMKELKLLQT-------IGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQA---FLAEA 237
Query: 114 SMVSRLKHENFVQLLGYCVDGTSRV-LAYEFASNGSLHDILHGR-KGVKGAQPGPVLSWQ 171
S++++L+H N VQLLG V+ + + E+ + GSL D L R + V G G L
Sbjct: 238 SVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLG---GDCL--- 291
Query: 172 QRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQA 224
+K ++ + +EYL + +HRD+ + NVL+ +D+VAK++DF L+ +A
Sbjct: 292 --LKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEA 339
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 97/173 (56%), Gaps = 26/173 (15%)
Query: 56 AISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIK--KLDASKQPDEEFLAQV 113
A+++ ELK + IG+G +G V G + G+ A+K K DA+ Q FLA+
Sbjct: 8 ALNMKELKLLQT-------IGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQA---FLAEA 56
Query: 114 SMVSRLKHENFVQLLGYCVDGTSRV-LAYEFASNGSLHDILHGR-KGVKGAQPGPVLSWQ 171
S++++L+H N VQLLG V+ + + E+ + GSL D L R + V G G L
Sbjct: 57 SVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLG---GDCL--- 110
Query: 172 QRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQA 224
+K ++ + +EYL + +HRD+ + NVL+ +D+VAK++DF L+ +A
Sbjct: 111 --LKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEA 158
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 97/173 (56%), Gaps = 26/173 (15%)
Query: 56 AISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIK--KLDASKQPDEEFLAQV 113
A+++ ELK + IG+G +G V G + G+ A+K K DA+ Q FLA+
Sbjct: 17 ALNMKELKLLQT-------IGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQA---FLAEA 65
Query: 114 SMVSRLKHENFVQLLGYCVDGTSRV-LAYEFASNGSLHDILHGR-KGVKGAQPGPVLSWQ 171
S++++L+H N VQLLG V+ + + E+ + GSL D L R + V G G L
Sbjct: 66 SVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLG---GDCL--- 119
Query: 172 QRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQA 224
+K ++ + +EYL + +HRD+ + NVL+ +D+VAK++DF L+ +A
Sbjct: 120 --LKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEA 167
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 92/174 (52%), Gaps = 16/174 (9%)
Query: 74 LIGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVD 133
++G G++G V ++ A IK++++ + + F+ ++ +SR+ H N V+L G C++
Sbjct: 16 VVGRGAFGVVCKAKWRAKDVA-IKQIESESE-RKAFIVELRQLSRVNHPNIVKLYGACLN 73
Query: 134 GTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADP 193
V+ E+A GSL+++LHG A+P P + + + ++G+ YLH
Sbjct: 74 PVCLVM--EYAEGGSLYNVLHG------AEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPK 125
Query: 194 HIIHRDIKSSNVLIF-DDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
+IHRD+K N+L+ V KI DF A D+ + H T G+ + APE
Sbjct: 126 ALIHRDLKPPNLLLVAGGTVLKICDF---GTACDI--QTHMTNNKGSAAWMAPE 174
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 76/148 (51%), Gaps = 11/148 (7%)
Query: 75 IGEGSYGRVYYGILKS-GHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVD 133
+G G YG VY G+ K A+K L EEFL + +++ +KH N VQLLG C
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 287
Query: 134 GTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADP 193
+ EF + G+L D L R+ + VL + +A + +EYL +K
Sbjct: 288 EPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVL-----LYMATQISSAMEYLEKK--- 337
Query: 194 HIIHRDIKSSNVLIFDDDVAKIADFDLS 221
+ IHR++ + N L+ ++ + K+ADF LS
Sbjct: 338 NFIHRNLAARNCLVGENHLVKVADFGLS 365
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 96/205 (46%), Gaps = 25/205 (12%)
Query: 55 PAISVDE-----LKEITENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQPDEE 108
PA S+DE L++ F L+G G+YG+VY G +K+G AAIK +D + +EE
Sbjct: 7 PARSLDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEE 66
Query: 109 FLAQVSMVSRLKH-ENFVQLLGYCVDGT------SRVLAYEFASNGSLHDILHGRKGVKG 161
+++M+ + H N G + L EF GS+ D++ KG
Sbjct: 67 IKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKG--- 123
Query: 162 AQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 221
L + I +GL +LH+ +IHRDIK NVL+ ++ K+ DF +S
Sbjct: 124 ----NTLKEEWIAYICREILRGLSHLHQHK---VIHRDIKGQNVLLTENAEVKLVDFGVS 176
Query: 222 NQAPDMAARLHSTRVLGTFGYHAPE 246
Q R ++ +GT + APE
Sbjct: 177 AQLDRTVGRRNT--FIGTPYWMAPE 199
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 92/174 (52%), Gaps = 16/174 (9%)
Query: 74 LIGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVD 133
++G G++G V ++ A IK++++ + + F+ ++ +SR+ H N V+L G C++
Sbjct: 15 VVGRGAFGVVCKAKWRAKDVA-IKQIESESE-RKAFIVELRQLSRVNHPNIVKLYGACLN 72
Query: 134 GTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADP 193
V+ E+A GSL+++LHG A+P P + + + ++G+ YLH
Sbjct: 73 PVCLVM--EYAEGGSLYNVLHG------AEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPK 124
Query: 194 HIIHRDIKSSNVLIF-DDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
+IHRD+K N+L+ V KI DF A D+ + H T G+ + APE
Sbjct: 125 ALIHRDLKPPNLLLVAGGTVLKICDF---GTACDI--QTHMTNNKGSAAWMAPE 173
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 75/160 (46%), Gaps = 11/160 (6%)
Query: 67 ENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQ 126
E+ +G+G +G V+ G AIK L E FL + ++ +++HE VQ
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKIRHEKLVQ 77
Query: 127 LLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEY 186
L V + E+ S GSL D L G G P Q V +A A G+ Y
Sbjct: 78 LYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP-------QLVDMAAQIASGMAY 129
Query: 187 LHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
+ + +HRD++++N+L+ ++ V K+ADF L+ D
Sbjct: 130 VERM---NYVHRDLRAANILVGENLVCKVADFGLARLIED 166
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 97/173 (56%), Gaps = 26/173 (15%)
Query: 56 AISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIK--KLDASKQPDEEFLAQV 113
A+++ ELK + IG+G +G V G + G+ A+K K DA+ Q FLA+
Sbjct: 2 ALNMKELKLLQT-------IGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQA---FLAEA 50
Query: 114 SMVSRLKHENFVQLLGYCVDGTSRV-LAYEFASNGSLHDILHGR-KGVKGAQPGPVLSWQ 171
S++++L+H N VQLLG V+ + + E+ + GSL D L R + V G G L
Sbjct: 51 SVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLG---GDCL--- 104
Query: 172 QRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQA 224
+K ++ + +EYL + +HRD+ + NVL+ +D+VAK++DF L+ +A
Sbjct: 105 --LKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEA 152
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 76/150 (50%), Gaps = 15/150 (10%)
Query: 75 IGEGSYGRVYYGILKS-GHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVD 133
+G G YG VY G+ K A+K L EEFL + +++ +KH N VQLLG C
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 284
Query: 134 GTSRVLAYEFASNGSLHDILH--GRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKA 191
+ EF + G+L D L R+ V VL + +A + +EYL +K
Sbjct: 285 EPPFYIITEFMTYGNLLDYLRECNRQEVNAV----VL-----LYMATQISSAMEYLEKK- 334
Query: 192 DPHIIHRDIKSSNVLIFDDDVAKIADFDLS 221
+ IHR++ + N L+ ++ + K+ADF LS
Sbjct: 335 --NFIHRNLAARNCLVGENHLVKVADFGLS 362
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 74/160 (46%), Gaps = 11/160 (6%)
Query: 67 ENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQ 126
E+ +G+G +G V+ G AIK L E FL + ++ +L+HE VQ
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ 77
Query: 127 LLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEY 186
L V + E+ S G L D L G G P Q V +A A G+ Y
Sbjct: 78 LYA-VVSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLP-------QLVDMAAQIASGMAY 129
Query: 187 LHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
+ + +HRD++++N+L+ ++ V K+ADF L+ D
Sbjct: 130 VERM---NYVHRDLRAANILVGENLVCKVADFGLARLIED 166
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 76/150 (50%), Gaps = 15/150 (10%)
Query: 75 IGEGSYGRVYYGILKS-GHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVD 133
+G G YG VY G+ K A+K L EEFL + +++ +KH N VQLLG C
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 326
Query: 134 GTSRVLAYEFASNGSLHDILH--GRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKA 191
+ EF + G+L D L R+ V VL + +A + +EYL +K
Sbjct: 327 EPPFYIITEFMTYGNLLDYLRECNRQEVNAV----VL-----LYMATQISSAMEYLEKK- 376
Query: 192 DPHIIHRDIKSSNVLIFDDDVAKIADFDLS 221
+ IHR++ + N L+ ++ + K+ADF LS
Sbjct: 377 --NFIHRNLAARNCLVGENHLVKVADFGLS 404
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 83/162 (51%), Gaps = 18/162 (11%)
Query: 74 LIGEGSYGRVYYGILKSGHAAAIK------KLDASKQPD-EEFLAQVSMVSRLKHENFVQ 126
++GEG +G V G LK ++K KLD S Q + EEFL++ + + H N ++
Sbjct: 41 ILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIR 100
Query: 127 LLGYCVDGTSR-----VLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAA 181
LLG C++ +S+ ++ F G LH L + G + P+ Q +K V A
Sbjct: 101 LLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPL---QTLLKFMVDIA 157
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQ 223
G+EYL + + +HRD+ + N ++ DD +ADF LS +
Sbjct: 158 LGMEYLSNR---NFLHRDLAARNCMLRDDMTVCVADFGLSKK 196
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 74/160 (46%), Gaps = 11/160 (6%)
Query: 67 ENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQ 126
E+ +G+G +G V+ G AIK L E FL + ++ +L+HE VQ
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ 77
Query: 127 LLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEY 186
L V + E+ S GSL D L G G P Q V +A A G+ Y
Sbjct: 78 LYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP-------QLVDMAAQIASGMAY 129
Query: 187 LHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
+ + +HRD+ ++N+L+ ++ V K+ADF L+ D
Sbjct: 130 VERM---NYVHRDLAAANILVGENLVCKVADFGLARLIED 166
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 74/160 (46%), Gaps = 11/160 (6%)
Query: 67 ENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQ 126
E+ +G+G +G V+ G AIK L E FL + ++ +L+HE VQ
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ 77
Query: 127 LLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEY 186
L V + E+ S G L D L G G P Q V +A A G+ Y
Sbjct: 78 LYA-VVSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLP-------QLVDMAAQIASGMAY 129
Query: 187 LHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
+ + +HRD++++N+L+ ++ V K+ADF L+ D
Sbjct: 130 VERM---NYVHRDLRAANILVGENLVCKVADFGLARLIED 166
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 76/160 (47%), Gaps = 11/160 (6%)
Query: 67 ENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQ 126
E+ +G+G +G V+ G AIK L E FL + ++ +L+HE VQ
Sbjct: 15 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ 74
Query: 127 LLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEY 186
L V + E+ + GSL D L G + G L Q V ++ A G+ Y
Sbjct: 75 LYA-VVSEEPIYIVTEYMNKGSLLDFLKG-------ETGKYLRLPQLVDMSAQIASGMAY 126
Query: 187 LHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
+ + +HRD++++N+L+ ++ V K+ADF L+ D
Sbjct: 127 VERM---NYVHRDLRAANILVGENLVCKVADFGLARLIED 163
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 86/161 (53%), Gaps = 16/161 (9%)
Query: 74 LIGEGSYGRVYYGILKSG---HAAAIKKLD--ASKQPDEEFLAQVSMVSRL-KHENFVQL 127
+IGEG++G+V +K AAIK++ ASK +F ++ ++ +L H N + L
Sbjct: 29 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 88
Query: 128 LGYCVDGTSRVLAYEFASNGSLHDILHGRKGVK-------GAQPGPVLSWQQRVKIAVGA 180
LG C LA E+A +G+L D L + ++ LS QQ + A
Sbjct: 89 LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADV 148
Query: 181 AKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 221
A+G++YL +K IHR++ + N+L+ ++ VAKIADF LS
Sbjct: 149 ARGMDYLSQK---QFIHRNLAARNILVGENYVAKIADFGLS 186
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 75/160 (46%), Gaps = 11/160 (6%)
Query: 67 ENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQ 126
E+ +G+G +G V+ G AIK L E FL + ++ +L+HE VQ
Sbjct: 15 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ 74
Query: 127 LLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEY 186
L V + E+ + GSL D L G G P Q V ++ A G+ Y
Sbjct: 75 LYA-VVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLP-------QLVDMSAQIASGMAY 126
Query: 187 LHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
+ + +HRD++++N+L+ ++ V K+ADF L+ D
Sbjct: 127 VERM---NYVHRDLRAANILVGENLVCKVADFGLARLIED 163
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 98/187 (52%), Gaps = 32/187 (17%)
Query: 75 IGEGSYGRVYYG-ILKSGHAAAIKKL---DASKQPD-----EEFLAQVSMVSRLKHENFV 125
IG+G +G V+ G ++K AIK L D+ + + +EF +V ++S L H N V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 126 QLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLE 185
+L G + V+ EF G L+ L + A P + W ++++ + A G+E
Sbjct: 87 KLYGLMHNPPRMVM--EFVPCGDLYHRL-----LDKAHP---IKWSVKLRLMLDIALGIE 136
Query: 186 YLHEKADPHIIHRDIKSSNVLI--FDDD---VAKIADFDLSNQAPDMAARLHSTR-VLGT 239
Y+ + +P I+HRD++S N+ + D++ AK+ADF LS Q+ +HS +LG
Sbjct: 137 YMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQS------VHSVSGLLGN 189
Query: 240 FGYHAPE 246
F + APE
Sbjct: 190 FQWMAPE 196
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 98/187 (52%), Gaps = 32/187 (17%)
Query: 75 IGEGSYGRVYYG-ILKSGHAAAIKKL---DASKQPD-----EEFLAQVSMVSRLKHENFV 125
IG+G +G V+ G ++K AIK L D+ + + +EF +V ++S L H N V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 126 QLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLE 185
+L G + V+ EF G L+ L + A P + W ++++ + A G+E
Sbjct: 87 KLYGLMHNPPRMVM--EFVPCGDLYHRL-----LDKAHP---IKWSVKLRLMLDIALGIE 136
Query: 186 YLHEKADPHIIHRDIKSSNVLI--FDDD---VAKIADFDLSNQAPDMAARLHSTR-VLGT 239
Y+ + +P I+HRD++S N+ + D++ AK+ADF LS Q+ +HS +LG
Sbjct: 137 YMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQS------VHSVSGLLGN 189
Query: 240 FGYHAPE 246
F + APE
Sbjct: 190 FQWMAPE 196
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 81/167 (48%), Gaps = 11/167 (6%)
Query: 60 DELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRL 119
DE + E +G G +G V+ G A+K L + FLA+ +++ +L
Sbjct: 16 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL 75
Query: 120 KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVG 179
+H+ V+L ++ E+ NGSL D L G+K L+ + + +A
Sbjct: 76 QHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIK-------LTINKLLDMAAQ 127
Query: 180 AAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
A+G+ ++ E+ + IHRD++++N+L+ D KIADF L+ D
Sbjct: 128 IAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIED 171
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 81/167 (48%), Gaps = 11/167 (6%)
Query: 60 DELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRL 119
DE + E +G G +G V+ G A+K L + FLA+ +++ +L
Sbjct: 14 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL 73
Query: 120 KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVG 179
+H+ V+L ++ E+ NGSL D L G+K L+ + + +A
Sbjct: 74 QHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIK-------LTINKLLDMAAQ 125
Query: 180 AAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
A+G+ ++ E+ + IHRD++++N+L+ D KIADF L+ D
Sbjct: 126 IAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIED 169
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 96/190 (50%), Gaps = 21/190 (11%)
Query: 75 IGEGSYGRVYY----GILK------SGHAAAIKKLDASKQPDEEFLAQVSMVSRL-KHEN 123
+GEG++G+V G+ K + A + K DA+++ + ++++ M+ + KH+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 124 FVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRK--GVKGA-----QPGPVLSWQQRVKI 176
+ LLG C + E+AS G+L + L R+ G++ + P LS + V
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 177 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRV 236
A A+G+EYL K IHRD+ + NVL+ +D+V KIADF L+ + +T
Sbjct: 156 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNG 212
Query: 237 LGTFGYHAPE 246
+ APE
Sbjct: 213 RLPVKWMAPE 222
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 72/152 (47%), Gaps = 11/152 (7%)
Query: 75 IGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDG 134
+G G +G V YG + + AIK + ++EF+ + ++ L HE VQL G C
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 91
Query: 135 TSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPH 194
+ E+ +NG L + L R+ Q QQ +++ + +EYL K
Sbjct: 92 RPIFIITEYMANGCLLNYL--REMRHRFQT------QQLLEMCKDVCEAMEYLESK---Q 140
Query: 195 IIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
+HRD+ + N L+ D V K++DF LS D
Sbjct: 141 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD 172
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 81/167 (48%), Gaps = 11/167 (6%)
Query: 60 DELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRL 119
DE + E +G G +G V+ G A+K L + FLA+ +++ +L
Sbjct: 15 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL 74
Query: 120 KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVG 179
+H+ V+L ++ E+ NGSL D L G+K L+ + + +A
Sbjct: 75 QHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIK-------LTINKLLDMAAQ 126
Query: 180 AAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
A+G+ ++ E+ + IHRD++++N+L+ D KIADF L+ D
Sbjct: 127 IAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIED 170
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 81/167 (48%), Gaps = 11/167 (6%)
Query: 60 DELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRL 119
DE + E +G G +G V+ G A+K L + FLA+ +++ +L
Sbjct: 8 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL 67
Query: 120 KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVG 179
+H+ V+L ++ E+ NGSL D L G+K L+ + + +A
Sbjct: 68 QHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIK-------LTINKLLDMAAQ 119
Query: 180 AAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
A+G+ ++ E+ + IHRD++++N+L+ D KIADF L+ D
Sbjct: 120 IAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIED 163
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 81/167 (48%), Gaps = 11/167 (6%)
Query: 60 DELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRL 119
DE + E +G G +G V+ G A+K L + FLA+ +++ +L
Sbjct: 12 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL 71
Query: 120 KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVG 179
+H+ V+L ++ E+ NGSL D L G+K L+ + + +A
Sbjct: 72 QHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIK-------LTINKLLDMAAQ 123
Query: 180 AAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
A+G+ ++ E+ + IHRD++++N+L+ D KIADF L+ D
Sbjct: 124 IAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIED 167
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 81/167 (48%), Gaps = 11/167 (6%)
Query: 60 DELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRL 119
DE + E +G G +G V+ G A+K L + FLA+ +++ +L
Sbjct: 6 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL 65
Query: 120 KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVG 179
+H+ V+L ++ E+ NGSL D L G+K L+ + + +A
Sbjct: 66 QHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIK-------LTINKLLDMAAQ 117
Query: 180 AAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
A+G+ ++ E+ + IHRD++++N+L+ D KIADF L+ D
Sbjct: 118 IAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIED 161
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 72/152 (47%), Gaps = 11/152 (7%)
Query: 75 IGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDG 134
+G G +G V YG + + AIK + ++EF+ + ++ L HE VQL G C
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 82
Query: 135 TSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPH 194
+ E+ +NG L + L R+ Q QQ +++ + +EYL K
Sbjct: 83 RPIFIITEYMANGCLLNYL--REMRHRFQT------QQLLEMCKDVCEAMEYLESK---Q 131
Query: 195 IIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
+HRD+ + N L+ D V K++DF LS D
Sbjct: 132 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD 163
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 72/152 (47%), Gaps = 11/152 (7%)
Query: 75 IGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDG 134
+G G +G V YG + + AIK + ++EF+ + ++ L HE VQL G C
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 91
Query: 135 TSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPH 194
+ E+ +NG L + L R+ Q QQ +++ + +EYL K
Sbjct: 92 RPIFIITEYMANGCLLNYL--REMRHRFQT------QQLLEMCKDVCEAMEYLESK---Q 140
Query: 195 IIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
+HRD+ + N L+ D V K++DF LS D
Sbjct: 141 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD 172
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 89/165 (53%), Gaps = 21/165 (12%)
Query: 75 IGEGSYGRVYY----GILK------SGHAAAIKKLDASKQPDEEFLAQVSMVSRL-KHEN 123
+GEG++G+V G+ K + A + K DA+++ + ++++ M+ + KH+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 124 FVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRK--GVKGA-----QPGPVLSWQQRVKI 176
+ LLG C + E+AS G+L + L R+ G++ + P LS + V
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 177 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 221
A A+G+EYL K IHRD+ + NVL+ +D+V KIADF L+
Sbjct: 156 AYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLA 197
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 81/167 (48%), Gaps = 11/167 (6%)
Query: 60 DELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRL 119
DE + E +G G +G V+ G A+K L + FLA+ +++ +L
Sbjct: 11 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL 70
Query: 120 KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVG 179
+H+ V+L ++ E+ NGSL D L G+K L+ + + +A
Sbjct: 71 QHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIK-------LTINKLLDMAAQ 122
Query: 180 AAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
A+G+ ++ E+ + IHRD++++N+L+ D KIADF L+ D
Sbjct: 123 IAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIED 166
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 81/167 (48%), Gaps = 11/167 (6%)
Query: 60 DELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRL 119
DE + E +G G +G V+ G A+K L + FLA+ +++ +L
Sbjct: 6 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL 65
Query: 120 KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVG 179
+H+ V+L ++ E+ NGSL D L G+K L+ + + +A
Sbjct: 66 QHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIK-------LTINKLLDMAAQ 117
Query: 180 AAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
A+G+ ++ E+ + IHRD++++N+L+ D KIADF L+ D
Sbjct: 118 IAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIED 161
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 72/152 (47%), Gaps = 11/152 (7%)
Query: 75 IGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDG 134
+G G +G V YG + + AIK + ++EF+ + ++ L HE VQL G C
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 76
Query: 135 TSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPH 194
+ E+ +NG L + L R+ Q QQ +++ + +EYL K
Sbjct: 77 RPIFIITEYMANGCLLNYL--REMRHRFQT------QQLLEMCKDVCEAMEYLESK---Q 125
Query: 195 IIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
+HRD+ + N L+ D V K++DF LS D
Sbjct: 126 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD 157
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 81/167 (48%), Gaps = 11/167 (6%)
Query: 60 DELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRL 119
DE + E +G G +G V+ G A+K L + FLA+ +++ +L
Sbjct: 12 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL 71
Query: 120 KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVG 179
+H+ V+L ++ E+ NGSL D L G+K L+ + + +A
Sbjct: 72 QHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIK-------LTINKLLDMAAQ 123
Query: 180 AAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
A+G+ ++ E+ + IHRD++++N+L+ D KIADF L+ D
Sbjct: 124 IAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIED 167
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 89/165 (53%), Gaps = 21/165 (12%)
Query: 75 IGEGSYGRVYY----GILK------SGHAAAIKKLDASKQPDEEFLAQVSMVSRL-KHEN 123
+GEG++G+V G+ K + A + K DA+++ + ++++ M+ + KH+N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 124 FVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRK--GVKGA-----QPGPVLSWQQRVKI 176
+ LLG C + E+AS G+L + L R+ G++ + P LS + V
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 177 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 221
A A+G+EYL K IHRD+ + NVL+ +D+V KIADF L+
Sbjct: 197 AYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLA 238
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 73.6 bits (179), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 72/152 (47%), Gaps = 11/152 (7%)
Query: 75 IGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDG 134
+G G +G V YG + + AIK + ++EF+ + ++ L HE VQL G C
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 75
Query: 135 TSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPH 194
+ E+ +NG L + L R+ Q QQ +++ + +EYL K
Sbjct: 76 RPIFIITEYMANGCLLNYL--REMRHRFQT------QQLLEMCKDVCEAMEYLESK---Q 124
Query: 195 IIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
+HRD+ + N L+ D V K++DF LS D
Sbjct: 125 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD 156
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 73.6 bits (179), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 89/165 (53%), Gaps = 21/165 (12%)
Query: 75 IGEGSYGRVYY----GILK------SGHAAAIKKLDASKQPDEEFLAQVSMVSRL-KHEN 123
+GEG++G+V G+ K + A + K DA+++ + ++++ M+ + KH+N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 124 FVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRK--GVKGA-----QPGPVLSWQQRVKI 176
+ LLG C + E+AS G+L + L R+ G++ + P LS + V
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 177 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 221
A A+G+EYL K IHRD+ + NVL+ +D+V KIADF L+
Sbjct: 148 AYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLA 189
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 73.6 bits (179), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 72/152 (47%), Gaps = 11/152 (7%)
Query: 75 IGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDG 134
+G G +G V YG + + AIK + ++EF+ + ++ L HE VQL G C
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 76
Query: 135 TSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPH 194
+ E+ +NG L + L R+ Q QQ +++ + +EYL K
Sbjct: 77 RPIFIITEYMANGCLLNYL--REMRHRFQT------QQLLEMCKDVCEAMEYLESK---Q 125
Query: 195 IIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
+HRD+ + N L+ D V K++DF LS D
Sbjct: 126 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD 157
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 73.6 bits (179), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 81/167 (48%), Gaps = 11/167 (6%)
Query: 60 DELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRL 119
DE + E +G G +G V+ G A+K L + FLA+ +++ +L
Sbjct: 6 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL 65
Query: 120 KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVG 179
+H+ V+L ++ E+ NGSL D L G+K L+ + + +A
Sbjct: 66 QHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIK-------LTINKLLDMAAQ 117
Query: 180 AAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
A+G+ ++ E+ + IHRD++++N+L+ D KIADF L+ D
Sbjct: 118 IAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIED 161
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 73.6 bits (179), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 81/167 (48%), Gaps = 11/167 (6%)
Query: 60 DELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRL 119
DE + E +G G +G V+ G A+K L + FLA+ +++ +L
Sbjct: 1 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL 60
Query: 120 KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVG 179
+H+ V+L ++ E+ NGSL D L G+K L+ + + +A
Sbjct: 61 QHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIK-------LTINKLLDMAAQ 112
Query: 180 AAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
A+G+ ++ E+ + IHRD++++N+L+ D KIADF L+ D
Sbjct: 113 IAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIED 156
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 73.6 bits (179), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 81/167 (48%), Gaps = 11/167 (6%)
Query: 60 DELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRL 119
DE + E +G G +G V+ G A+K L + FLA+ +++ +L
Sbjct: 7 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL 66
Query: 120 KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVG 179
+H+ V+L ++ E+ NGSL D L G+K L+ + + +A
Sbjct: 67 QHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIK-------LTINKLLDMAAQ 118
Query: 180 AAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
A+G+ ++ E+ + IHRD++++N+L+ D KIADF L+ D
Sbjct: 119 IAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIED 162
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 73.6 bits (179), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 89/165 (53%), Gaps = 21/165 (12%)
Query: 75 IGEGSYGRVYY----GILK------SGHAAAIKKLDASKQPDEEFLAQVSMVSRL-KHEN 123
+GEG++G+V G+ K + A + K DA+++ + ++++ M+ + KH+N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 124 FVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRK--GVKGA-----QPGPVLSWQQRVKI 176
+ LLG C + E+AS G+L + L R+ G++ + P LS + V
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 177 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 221
A A+G+EYL K IHRD+ + NVL+ +D+V KIADF L+
Sbjct: 149 AYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLA 190
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 73.6 bits (179), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 89/165 (53%), Gaps = 21/165 (12%)
Query: 75 IGEGSYGRVYY----GILK------SGHAAAIKKLDASKQPDEEFLAQVSMVSRL-KHEN 123
+GEG++G+V G+ K + A + K DA+++ + ++++ M+ + KH+N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 124 FVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRK--GVKGA-----QPGPVLSWQQRVKI 176
+ LLG C + E+AS G+L + L R+ G++ + P LS + V
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 177 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 221
A A+G+EYL K IHRD+ + NVL+ +D+V KIADF L+
Sbjct: 145 AYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLA 186
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 73.6 bits (179), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 72/152 (47%), Gaps = 11/152 (7%)
Query: 75 IGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDG 134
+G G +G V YG + + AIK + ++EF+ + ++ L HE VQL G C
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 71
Query: 135 TSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPH 194
+ E+ +NG L + L R+ Q QQ +++ + +EYL K
Sbjct: 72 RPIFIITEYMANGCLLNYL--REMRHRFQT------QQLLEMCKDVCEAMEYLESK---Q 120
Query: 195 IIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
+HRD+ + N L+ D V K++DF LS D
Sbjct: 121 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD 152
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 73.6 bits (179), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 88/165 (53%), Gaps = 21/165 (12%)
Query: 75 IGEGSYGRVYY----GILK------SGHAAAIKKLDASKQPDEEFLAQVSMVSRL-KHEN 123
+GEG++G+V G+ K + A + K DA+++ + ++++ M+ + KH+N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 124 FVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRK--GVK-----GAQPGPVLSWQQRVKI 176
+ LLG C + E+AS G+L + L R+ G++ P LS + V
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 177 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 221
A A+G+EYL K IHRD+ + NVL+ +D+V KIADF L+
Sbjct: 141 AYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLA 182
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 88/165 (53%), Gaps = 21/165 (12%)
Query: 75 IGEGSYGRVYY----GILK------SGHAAAIKKLDASKQPDEEFLAQVSMVSRL-KHEN 123
+GEG++G+V G+ K + A + K DA+++ + ++++ M+ + KH+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 124 FVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRK--GVK-----GAQPGPVLSWQQRVKI 176
+ LLG C + E+AS G+L + L R+ G++ P LS + V
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 177 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 221
A A+G+EYL K IHRD+ + NVL+ +D+V KIADF L+
Sbjct: 156 AYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLA 197
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 97/190 (51%), Gaps = 21/190 (11%)
Query: 75 IGEGSYGRVYY----GI----LKSGHAAAIKKL--DASKQPDEEFLAQVSMVSRL-KHEN 123
+GEG++G+V GI K A+K L DA+++ + ++++ M+ + KH+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 124 FVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRK--GVKGAQ-----PGPVLSWQQRVKI 176
+ LLG C + E+AS G+L + L R+ G++ + P ++++ V
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSC 162
Query: 177 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRV 236
A+G+EYL A IHRD+ + NVL+ +++V KIADF L+ ++ +T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 237 LGTFGYHAPE 246
+ APE
Sbjct: 220 RLPVKWMAPE 229
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 89/165 (53%), Gaps = 21/165 (12%)
Query: 75 IGEGSYGRVYY----GILK------SGHAAAIKKLDASKQPDEEFLAQVSMVSRL-KHEN 123
+GEG++G+V G+ K + A + K DA+++ + ++++ M+ + KH+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 124 FVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRK--GVKGA-----QPGPVLSWQQRVKI 176
+ LLG C + E+AS G+L + L R+ G++ + P LS + V
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 177 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 221
A A+G+EYL K IHRD+ + NVL+ +D+V KIADF L+
Sbjct: 156 AYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLA 197
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 85/172 (49%), Gaps = 26/172 (15%)
Query: 75 IGEGSYGRVYY----GIL--KSGHAAAIKKL--DASKQPDEEFLAQVSMVSRLKHENFVQ 126
IGEG++GRV+ G+L + A+K L +AS +F + ++++ + N V+
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 127 LLGYCVDGTSRVLAYEFASNGSLHDILHGRKG--------------VKGAQPG-PVLSWQ 171
LLG C G L +E+ + G L++ L + + PG P LS
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 174
Query: 172 QRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQ 223
+++ IA A G+ YL E+ +HRD+ + N L+ ++ V KIADF LS
Sbjct: 175 EQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSRN 223
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 96/190 (50%), Gaps = 21/190 (11%)
Query: 75 IGEGSYGRVYY----GI----LKSGHAAAIKKL--DASKQPDEEFLAQVSMVSRL-KHEN 123
+GEG++G+V GI K A+K L DA+++ + ++++ M+ + KH+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 124 FVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRK--GVK-----GAQPGPVLSWQQRVKI 176
+ LLG C + E+AS G+L + L R+ G++ P ++++ V
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 177 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRV 236
A+G+EYL A IHRD+ + NVL+ +++V KIADF L+ ++ +T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 237 LGTFGYHAPE 246
+ APE
Sbjct: 220 RLPVKWMAPE 229
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 87/175 (49%), Gaps = 17/175 (9%)
Query: 75 IGEGSYGRVYYGILKSGHAAAIKKLDAS---KQPDEEFLAQVSMVSRLKHENFVQLLGYC 131
IG GS+G VY G K A+K L+ + Q + F +V ++ + +H N + +GY
Sbjct: 32 IGSGSFGTVYKG--KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 132 VDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKA 191
++ ++ SL+ LH + ++ + IA A+G++YLH K+
Sbjct: 90 TKPQLAIVT-QWCEGSSLYHHLHASE--------TKFEMKKLIDIARQTARGMDYLHAKS 140
Query: 192 DPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
IIHRD+KS+N+ + +D+ KI DF L+ + + ++ G+ + APE
Sbjct: 141 ---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPE 192
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 86/175 (49%), Gaps = 17/175 (9%)
Query: 75 IGEGSYGRVYYGILKSGHAAAIKKLDAS---KQPDEEFLAQVSMVSRLKHENFVQLLGYC 131
IG GS+G VY G K A+K L+ + Q + F +V ++ + +H N + +GY
Sbjct: 32 IGSGSFGTVYKG--KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 132 VDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKA 191
+ ++ SL+ LH + ++ + IA A+G++YLH K+
Sbjct: 90 T-APQLAIVTQWCEGSSLYHHLHASE--------TKFEMKKLIDIARQTARGMDYLHAKS 140
Query: 192 DPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
IIHRD+KS+N+ + +D+ KI DF L+ + + ++ G+ + APE
Sbjct: 141 ---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPE 192
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 97/190 (51%), Gaps = 21/190 (11%)
Query: 75 IGEGSYGRVYY----GI----LKSGHAAAIKKL--DASKQPDEEFLAQVSMVSRL-KHEN 123
+GEG++G+V GI K A+K L DA+++ + ++++ M+ + KH+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 124 FVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRK--GVK-----GAQPGPVLSWQQRVKI 176
+ LLG C + E+AS G+L + L R+ G++ P ++++ V
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 177 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRV 236
A+G+EYL A IHRD+ + NVL+ +++V KIADF L+ ++ ++T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNG 219
Query: 237 LGTFGYHAPE 246
+ APE
Sbjct: 220 RLPVKWMAPE 229
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 97/187 (51%), Gaps = 32/187 (17%)
Query: 75 IGEGSYGRVYYG-ILKSGHAAAIKKL---DASKQPD-----EEFLAQVSMVSRLKHENFV 125
IG+G +G V+ G ++K AIK L D+ + + +EF +V ++S L H N V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 126 QLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLE 185
+L G + V+ EF G L+ L + A P + W ++++ + A G+E
Sbjct: 87 KLYGLMHNPPRMVM--EFVPCGDLYHRL-----LDKAHP---IKWSVKLRLMLDIALGIE 136
Query: 186 YLHEKADPHIIHRDIKSSNVLI--FDDD---VAKIADFDLSNQAPDMAARLHSTR-VLGT 239
Y+ + +P I+HRD++S N+ + D++ AK+ADF S Q+ +HS +LG
Sbjct: 137 YMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQS------VHSVSGLLGN 189
Query: 240 FGYHAPE 246
F + APE
Sbjct: 190 FQWMAPE 196
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 97/190 (51%), Gaps = 21/190 (11%)
Query: 75 IGEGSYGRVYY----GI----LKSGHAAAIKKL--DASKQPDEEFLAQVSMVSRL-KHEN 123
+GEG++G+V GI K A+K L DA+++ + ++++ M+ + KH+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 124 FVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRK--GVKGAQ-----PGPVLSWQQRVKI 176
+ LLG C + E+AS G+L + L R+ G++ + P ++++ V
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 177 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRV 236
A+G+EYL A IHRD+ + NVL+ +++V KIADF L+ ++ +T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 237 LGTFGYHAPE 246
+ APE
Sbjct: 220 RLPVKWMAPE 229
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 77/152 (50%), Gaps = 11/152 (7%)
Query: 75 IGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDG 134
+G G +G V+ G A+K L + FLA+ +++ +L+H+ V+L
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 76
Query: 135 TSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPH 194
++ E+ NGSL D L G+K L+ + + +A A+G+ ++ E+ +
Sbjct: 77 PIYIIT-EYMENGSLVDFLKTPSGIK-------LTINKLLDMAAQIAEGMAFIEER---N 125
Query: 195 IIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
IHR+++++N+L+ D KIADF L+ D
Sbjct: 126 YIHRNLRAANILVSDTLSCKIADFGLARLIED 157
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 96/190 (50%), Gaps = 21/190 (11%)
Query: 75 IGEGSYGRVYY----GI----LKSGHAAAIKKL--DASKQPDEEFLAQVSMVSRL-KHEN 123
+GEG +G+V GI K A+K L DA+++ + ++++ M+ + KH+N
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 124 FVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRK--GVKGAQ-----PGPVLSWQQRVKI 176
+ LLG C + E+AS G+L + L R+ G++ + P ++++ V
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 149
Query: 177 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRV 236
A+G+EYL A IHRD+ + NVL+ +++V KIADF L+ ++ +T
Sbjct: 150 TYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 206
Query: 237 LGTFGYHAPE 246
+ APE
Sbjct: 207 RLPVKWMAPE 216
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 96/190 (50%), Gaps = 21/190 (11%)
Query: 75 IGEGSYGRVYY----GI----LKSGHAAAIKKL--DASKQPDEEFLAQVSMVSRL-KHEN 123
+GEG++G+V GI K A+K L DA+++ + ++++ M+ + KH+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 124 FVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRK--GVK-----GAQPGPVLSWQQRVKI 176
+ LLG C + E+AS G+L + L R+ G++ P ++++ V
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 177 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRV 236
A+G+EYL A IHRD+ + NVL+ +++V KIADF L+ ++ +T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 237 LGTFGYHAPE 246
+ APE
Sbjct: 220 RLPVKWMAPE 229
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 97/190 (51%), Gaps = 21/190 (11%)
Query: 75 IGEGSYGRVYY----GI----LKSGHAAAIKKL--DASKQPDEEFLAQVSMVSRL-KHEN 123
+GEG++G+V GI K A+K L DA+++ + ++++ M+ + KH+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 124 FVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRK--GVKGAQ-----PGPVLSWQQRVKI 176
+ LLG C + E+AS G+L + L R+ G++ + P ++++ V
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 177 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRV 236
A+G+EYL A IHRD+ + NVL+ +++V KIADF L+ ++ +T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 237 LGTFGYHAPE 246
+ APE
Sbjct: 220 RLPVKWMAPE 229
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 95/190 (50%), Gaps = 21/190 (11%)
Query: 75 IGEGSYGRVYY----GI----LKSGHAAAIKKL--DASKQPDEEFLAQVSMVSRL-KHEN 123
+GEG +G+V GI K A+K L DA+++ + ++++ M+ + KH+N
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 124 FVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRK--GVK-----GAQPGPVLSWQQRVKI 176
+ LLG C + E+AS G+L + L R+ G++ P ++++ V
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 154
Query: 177 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRV 236
A+G+EYL A IHRD+ + NVL+ +++V KIADF L+ ++ +T
Sbjct: 155 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 211
Query: 237 LGTFGYHAPE 246
+ APE
Sbjct: 212 RLPVKWMAPE 221
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 96/190 (50%), Gaps = 21/190 (11%)
Query: 75 IGEGSYGRVYY----GI----LKSGHAAAIKKL--DASKQPDEEFLAQVSMVSRL-KHEN 123
+GEG +G+V GI K A+K L DA+++ + ++++ M+ + KH+N
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 124 FVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRK--GVKGAQ-----PGPVLSWQQRVKI 176
+ LLG C + E+AS G+L + L R+ G++ + P ++++ V
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 151
Query: 177 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRV 236
A+G+EYL A IHRD+ + NVL+ +++V KIADF L+ ++ +T
Sbjct: 152 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 208
Query: 237 LGTFGYHAPE 246
+ APE
Sbjct: 209 RLPVKWMAPE 218
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 95/190 (50%), Gaps = 21/190 (11%)
Query: 75 IGEGSYGRVYY----GI----LKSGHAAAIKKL--DASKQPDEEFLAQVSMVSRL-KHEN 123
+GEG +G+V GI K A+K L DA+++ + ++++ M+ + KH+N
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 124 FVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRK--GVK-----GAQPGPVLSWQQRVKI 176
+ LLG C + E+AS G+L + L R+ G++ P ++++ V
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 208
Query: 177 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRV 236
A+G+EYL A IHRD+ + NVL+ +++V KIADF L+ ++ +T
Sbjct: 209 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 265
Query: 237 LGTFGYHAPE 246
+ APE
Sbjct: 266 RLPVKWMAPE 275
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 70/152 (46%), Gaps = 11/152 (7%)
Query: 75 IGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDG 134
+G G +G V+ G AIK L E FL + ++ +LKH+ VQL V
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHDKLVQLYA-VVSE 75
Query: 135 TSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPH 194
+ E+ + GSL D L +G P V +A A G+ Y+ +
Sbjct: 76 EPIYIVTEYMNKGSLLDFLKDGEGRALKLPN-------LVDMAAQVAAGMAYIERM---N 125
Query: 195 IIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
IHRD++S+N+L+ + + KIADF L+ D
Sbjct: 126 YIHRDLRSANILVGNGLICKIADFGLARLIED 157
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 76/152 (50%), Gaps = 11/152 (7%)
Query: 75 IGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDG 134
+G G G V+ G A+K L + FLA+ +++ +L+H+ V+L
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 80
Query: 135 TSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPH 194
++ E+ NGSL D L G+K L+ + + +A A+G+ ++ E+ +
Sbjct: 81 PIYIIT-EYMENGSLVDFLKTPSGIK-------LTINKLLDMAAQIAEGMAFIEER---N 129
Query: 195 IIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
IHRD++++N+L+ D KIADF L+ D
Sbjct: 130 YIHRDLRAANILVSDTLSCKIADFGLARLIED 161
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 96/190 (50%), Gaps = 21/190 (11%)
Query: 75 IGEGSYGRVYY----GI----LKSGHAAAIKKL--DASKQPDEEFLAQVSMVSRL-KHEN 123
+GEG++G+V GI K A+K L DA+++ + ++++ M+ + KH+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 124 FVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRK--GVK-----GAQPGPVLSWQQRVKI 176
+ LLG C + E+AS G+L + L R+ G++ P ++++ V
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 177 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRV 236
A+G+EYL A IHRD+ + NVL+ +++V +IADF L+ ++ +T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNG 219
Query: 237 LGTFGYHAPE 246
+ APE
Sbjct: 220 RLPVKWMAPE 229
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 84/175 (48%), Gaps = 19/175 (10%)
Query: 75 IGEGSYGRVYYGILKS-GHAAAIKKLDASKQPDEEFL-AQVSMVSRLKHENFVQLLGYCV 132
IGEGS G V ++S G A+KK+D KQ E L +V ++ +HEN V++ +
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 141
Query: 133 DGTSRVLAYEFASNGSLHDIL-HGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKA 191
G + EF G+L DI+ H R ++ +Q + + + L LH +
Sbjct: 142 VGDELWVVMEFLEGGALTDIVTHTR-----------MNEEQIAAVCLAVLQALSVLHAQG 190
Query: 192 DPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
+IHRDIKS ++L+ D K++DF Q R ++GT + APE
Sbjct: 191 ---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR--RKXLVGTPYWMAPE 240
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 84/175 (48%), Gaps = 19/175 (10%)
Query: 75 IGEGSYGRVYYGILKS-GHAAAIKKLDASKQPDEEFL-AQVSMVSRLKHENFVQLLGYCV 132
IGEGS G V ++S G A+KK+D KQ E L +V ++ +HEN V++ +
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 218
Query: 133 DGTSRVLAYEFASNGSLHDIL-HGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKA 191
G + EF G+L DI+ H R ++ +Q + + + L LH +
Sbjct: 219 VGDELWVVMEFLEGGALTDIVTHTR-----------MNEEQIAAVCLAVLQALSVLHAQG 267
Query: 192 DPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
+IHRDIKS ++L+ D K++DF Q R ++GT + APE
Sbjct: 268 ---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR--RKXLVGTPYWMAPE 317
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 84/175 (48%), Gaps = 19/175 (10%)
Query: 75 IGEGSYGRVYYGILKS-GHAAAIKKLDASKQPDEEFL-AQVSMVSRLKHENFVQLLGYCV 132
IGEGS G V ++S G A+KK+D KQ E L +V ++ +HEN V++ +
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 98
Query: 133 DGTSRVLAYEFASNGSLHDIL-HGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKA 191
G + EF G+L DI+ H R ++ +Q + + + L LH +
Sbjct: 99 VGDELWVVMEFLEGGALTDIVTHTR-----------MNEEQIAAVCLAVLQALSVLHAQG 147
Query: 192 DPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
+IHRDIKS ++L+ D K++DF Q R ++GT + APE
Sbjct: 148 ---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR--RKXLVGTPYWMAPE 197
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 86/175 (49%), Gaps = 17/175 (9%)
Query: 75 IGEGSYGRVYYGILKSGHAAAIKKLDAS---KQPDEEFLAQVSMVSRLKHENFVQLLGYC 131
IG GS+G VY G K A+K L+ + Q + F +V ++ + +H N + +GY
Sbjct: 20 IGSGSFGTVYKG--KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 77
Query: 132 VDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKA 191
++ ++ SL+ LH + ++ + IA A+G++YLH K+
Sbjct: 78 TKPQLAIVT-QWCEGSSLYHHLHASE--------TKFEMKKLIDIARQTARGMDYLHAKS 128
Query: 192 DPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
IIHRD+KS+N+ + +D+ KI DF L+ + ++ G+ + APE
Sbjct: 129 ---IIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 180
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 84/175 (48%), Gaps = 19/175 (10%)
Query: 75 IGEGSYGRVYYGILKS-GHAAAIKKLDASKQPDEEFL-AQVSMVSRLKHENFVQLLGYCV 132
IGEGS G V ++S G A+KK+D KQ E L +V ++ +HEN V++ +
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 91
Query: 133 DGTSRVLAYEFASNGSLHDIL-HGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKA 191
G + EF G+L DI+ H R ++ +Q + + + L LH +
Sbjct: 92 VGDELWVVMEFLEGGALTDIVTHTR-----------MNEEQIAAVCLAVLQALSVLHAQG 140
Query: 192 DPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
+IHRDIKS ++L+ D K++DF Q R ++GT + APE
Sbjct: 141 ---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR--RKXLVGTPYWMAPE 190
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 84/175 (48%), Gaps = 19/175 (10%)
Query: 75 IGEGSYGRVYYGILKS-GHAAAIKKLDASKQPDEEFL-AQVSMVSRLKHENFVQLLGYCV 132
IGEGS G V ++S G A+KK+D KQ E L +V ++ +HEN V++ +
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 96
Query: 133 DGTSRVLAYEFASNGSLHDIL-HGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKA 191
G + EF G+L DI+ H R ++ +Q + + + L LH +
Sbjct: 97 VGDELWVVMEFLEGGALTDIVTHTR-----------MNEEQIAAVCLAVLQALSVLHAQG 145
Query: 192 DPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
+IHRDIKS ++L+ D K++DF Q R ++GT + APE
Sbjct: 146 ---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR--RKXLVGTPYWMAPE 195
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 84/175 (48%), Gaps = 19/175 (10%)
Query: 75 IGEGSYGRVYYGILKS-GHAAAIKKLDASKQPDEEFL-AQVSMVSRLKHENFVQLLGYCV 132
IGEGS G V ++S G A+KK+D KQ E L +V ++ +HEN V++ +
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 133 DGTSRVLAYEFASNGSLHDIL-HGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKA 191
G + EF G+L DI+ H R ++ +Q + + + L LH +
Sbjct: 88 VGDELWVVMEFLEGGALTDIVTHTR-----------MNEEQIAAVCLAVLQALSVLHAQG 136
Query: 192 DPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
+IHRDIKS ++L+ D K++DF Q R ++GT + APE
Sbjct: 137 ---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR--RKXLVGTPYWMAPE 186
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 85/162 (52%), Gaps = 18/162 (11%)
Query: 75 IGEGSYGRVY----YGIL--KSGHAAAIKKL-DASKQPDEEFLAQVSMVSRLKHENFVQL 127
+GEG++G+V+ + +L + A+K L +AS+ ++F + +++ L+H++ V+
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 128 LGYCVDGTSRVLAYEFASNGSLHDIL--HG-----RKGVKGAQPGPVLSWQQRVKIAVGA 180
G C +G ++ +E+ +G L+ L HG G + PGP L Q + +A
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGP-LGLGQLLAVASQV 167
Query: 181 AKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSN 222
A G+ YL A H +HRD+ + N L+ V KI DF +S
Sbjct: 168 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSR 206
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 73/152 (48%), Gaps = 10/152 (6%)
Query: 75 IGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDG 134
+G G +G V+ G + A+K L + FL + +++ L+H+ V+L
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKE 79
Query: 135 TSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPH 194
+ EF + GSL D L +G K P + + + A+G+ Y+ K +
Sbjct: 80 EPIYIITEFMAKGSLLDFLKSDEGGKVLLP-------KLIDFSAQIAEGMAYIERK---N 129
Query: 195 IIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
IHRD++++NVL+ + + KIADF L+ D
Sbjct: 130 YIHRDLRAANVLVSESLMCKIADFGLARVIED 161
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 85/162 (52%), Gaps = 18/162 (11%)
Query: 75 IGEGSYGRVY----YGIL--KSGHAAAIKKL-DASKQPDEEFLAQVSMVSRLKHENFVQL 127
+GEG++G+V+ + +L + A+K L +AS+ ++F + +++ L+H++ V+
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 128 LGYCVDGTSRVLAYEFASNGSLHDIL--HG-----RKGVKGAQPGPVLSWQQRVKIAVGA 180
G C +G ++ +E+ +G L+ L HG G + PGP L Q + +A
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGP-LGLGQLLAVASQV 144
Query: 181 AKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSN 222
A G+ YL A H +HRD+ + N L+ V KI DF +S
Sbjct: 145 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSR 183
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 70.1 bits (170), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 85/162 (52%), Gaps = 18/162 (11%)
Query: 75 IGEGSYGRVY----YGIL--KSGHAAAIKKL-DASKQPDEEFLAQVSMVSRLKHENFVQL 127
+GEG++G+V+ + +L + A+K L +AS+ ++F + +++ L+H++ V+
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 128 LGYCVDGTSRVLAYEFASNGSLHDIL--HG-----RKGVKGAQPGPVLSWQQRVKIAVGA 180
G C +G ++ +E+ +G L+ L HG G + PGP L Q + +A
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGP-LGLGQLLAVASQV 138
Query: 181 AKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSN 222
A G+ YL A H +HRD+ + N L+ V KI DF +S
Sbjct: 139 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSR 177
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 83/156 (53%), Gaps = 19/156 (12%)
Query: 74 LIGEGSYGRVYYGI-LKSGHAA----AIKKLDASKQP--DEEFLAQVSMVSRLKHENFVQ 126
++G G++G VY GI + G AIK L+ + P + EF+ + +++ + H + V+
Sbjct: 45 VLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVR 104
Query: 127 LLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEY 186
LLG C+ T + L + +G L + +H K G+Q +L+W V AKG+ Y
Sbjct: 105 LLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQL--LLNW------CVQIAKGMMY 155
Query: 187 LHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSN 222
L E+ ++HRD+ + NVL+ + KI DF L+
Sbjct: 156 LEER---RLVHRDLAARNVLVKSPNHVKITDFGLAR 188
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 95/190 (50%), Gaps = 21/190 (11%)
Query: 75 IGEGSYGRVYY----GI----LKSGHAAAIKKL--DASKQPDEEFLAQVSMVSRL-KHEN 123
+GEG++G+V GI K A+K L DA+++ + ++++ M+ + KH+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 124 FVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRK--GVK-----GAQPGPVLSWQQRVKI 176
+ LLG C + +AS G+L + L R+ G++ P ++++ V
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 177 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRV 236
A+G+EYL A IHRD+ + NVL+ +++V KIADF L+ ++ +T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 237 LGTFGYHAPE 246
+ APE
Sbjct: 220 RLPVKWMAPE 229
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 85/175 (48%), Gaps = 19/175 (10%)
Query: 75 IGEGSYGRVYYGI-LKSGHAAAIKKLDASKQPDEEFLAQVSMVSRL-KHENFVQLLGYCV 132
IG+G+ G VY + + +G AI++++ +QP +E + +V R K+ N V L +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 133 DGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKAD 192
G + E+ + GSL D++ +G Q + + LE+LH
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTETCMDEG----------QIAAVCRECLQALEFLHSN-- 135
Query: 193 PHIIHRDIKSSNVLIFDDDVAKIADFDLSNQ-APDMAARLHSTRVLGTFGYHAPE 246
+IHRDIKS N+L+ D K+ DF Q P+ + R + ++GT + APE
Sbjct: 136 -QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR---SEMVGTPYWMAPE 186
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 86/182 (47%), Gaps = 20/182 (10%)
Query: 74 LIGEGSYGRVYYGILKSG----HAAAIKKLDA--SKQPDEEFLAQVSMVSRLKHENFVQL 127
+IG G +G V G LK+ AIK L +++ EFL++ S++ + +H N ++L
Sbjct: 23 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRL 82
Query: 128 LGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYL 187
G + ++ EF NG+L L G + Q V + G A G+ YL
Sbjct: 83 EGVVTNSMPVMILTEFMENGALDSFLRLNDG--------QFTVIQLVGMLRGIASGMRYL 134
Query: 188 HEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLG---TFGYHA 244
E + +HRD+ + N+L+ + V K++DF LS + ++ T LG + A
Sbjct: 135 AEMS---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTA 191
Query: 245 PE 246
PE
Sbjct: 192 PE 193
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 85/175 (48%), Gaps = 19/175 (10%)
Query: 75 IGEGSYGRVYYGI-LKSGHAAAIKKLDASKQPDEEFLAQVSMVSRL-KHENFVQLLGYCV 132
IG+G+ G VY + + +G AI++++ +QP +E + +V R K+ N V L +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 133 DGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKAD 192
G + E+ + GSL D++ +G Q + + LE+LH
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTETCMDEG----------QIAAVCRECLQALEFLHSN-- 135
Query: 193 PHIIHRDIKSSNVLIFDDDVAKIADFDLSNQ-APDMAARLHSTRVLGTFGYHAPE 246
+IHRDIKS N+L+ D K+ DF Q P+ + R + ++GT + APE
Sbjct: 136 -QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR---SXMVGTPYWMAPE 186
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 85/175 (48%), Gaps = 19/175 (10%)
Query: 75 IGEGSYGRVYYGI-LKSGHAAAIKKLDASKQPDEEFLAQVSMVSRL-KHENFVQLLGYCV 132
IG+G+ G VY + + +G AI++++ +QP +E + +V R K+ N V L +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 133 DGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKAD 192
G + E+ + GSL D++ +G Q + + LE+LH
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTETCMDEG----------QIAAVCRECLQALEFLHSN-- 135
Query: 193 PHIIHRDIKSSNVLIFDDDVAKIADFDLSNQ-APDMAARLHSTRVLGTFGYHAPE 246
+IHRDIKS N+L+ D K+ DF Q P+ + R + ++GT + APE
Sbjct: 136 -QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR---STMVGTPYWMAPE 186
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 86/176 (48%), Gaps = 17/176 (9%)
Query: 58 SVDELKEIT-ENFGTNALIGEGSYGRVYYGILK------SGHAAAIKKLD--ASKQPDEE 108
S+ +LKE+ +N +G G++G VY G + S A+K L S+Q + +
Sbjct: 21 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 80
Query: 109 FLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVL 168
FL + ++S+L H+N V+ +G + R + E + G L L + + +QP L
Sbjct: 81 FLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRP-RPSQPS-SL 138
Query: 169 SWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIF---DDDVAKIADFDLS 221
+ + +A A G +YL E H IHRDI + N L+ VAKI DF ++
Sbjct: 139 AMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 191
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 85/175 (48%), Gaps = 19/175 (10%)
Query: 75 IGEGSYGRVYYGI-LKSGHAAAIKKLDASKQPDEEFLAQVSMVSRL-KHENFVQLLGYCV 132
IG+G+ G VY + + +G AI++++ +QP +E + +V R K+ N V L +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 133 DGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKAD 192
G + E+ + GSL D++ +G Q + + LE+LH
Sbjct: 89 VGDELWVVMEYLAGGSLTDVVTETCMDEG----------QIAAVCRECLQALEFLHSN-- 136
Query: 193 PHIIHRDIKSSNVLIFDDDVAKIADFDLSNQ-APDMAARLHSTRVLGTFGYHAPE 246
+IHRDIKS N+L+ D K+ DF Q P+ + R + ++GT + APE
Sbjct: 137 -QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR---SXMVGTPYWMAPE 187
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 87/178 (48%), Gaps = 26/178 (14%)
Query: 67 ENFGTNALIGEGSYGRVY----YGILKSGHA--AAIKKLD--ASKQPDEEFLAQVSMVSR 118
EN ++G G++G+V YGI K+G + A+K L A E ++++ M+++
Sbjct: 45 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQ 104
Query: 119 L-KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGR--------------KGVKGAQ 163
L HEN V LLG C L +E+ G L + L + K ++ +
Sbjct: 105 LGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEE 164
Query: 164 PGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 221
VL+++ + A AKG+E+L K+ +HRD+ + NVL+ V KI DF L+
Sbjct: 165 DLNVLTFEDLLCFAYQVAKGMEFLEFKS---CVHRDLAARNVLVTHGKVVKICDFGLA 219
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 86/176 (48%), Gaps = 17/176 (9%)
Query: 58 SVDELKEIT-ENFGTNALIGEGSYGRVYYGILK------SGHAAAIKKLD--ASKQPDEE 108
S+ +LKE+ +N +G G++G VY G + S A+K L S+Q + +
Sbjct: 35 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 94
Query: 109 FLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVL 168
FL + ++S+L H+N V+ +G + R + E + G L L + + +QP L
Sbjct: 95 FLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRP-RPSQPS-SL 152
Query: 169 SWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIF---DDDVAKIADFDLS 221
+ + +A A G +YL E H IHRDI + N L+ VAKI DF ++
Sbjct: 153 AMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 205
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 83/156 (53%), Gaps = 19/156 (12%)
Query: 74 LIGEGSYGRVYYGI-LKSGHAA----AIKKLDASKQP--DEEFLAQVSMVSRLKHENFVQ 126
++G G++G VY GI + G AIK L+ + P + EF+ + +++ + H + V+
Sbjct: 22 VLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVR 81
Query: 127 LLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEY 186
LLG C+ T + L + +G L + +H K G+Q +L+W V AKG+ Y
Sbjct: 82 LLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQL--LLNW------CVQIAKGMMY 132
Query: 187 LHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSN 222
L E+ ++HRD+ + NVL+ + KI DF L+
Sbjct: 133 LEER---RLVHRDLAARNVLVKSPNHVKITDFGLAR 165
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 73/152 (48%), Gaps = 10/152 (6%)
Query: 75 IGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDG 134
+G G +G V+ G + A+K L + FL + +++ L+H+ V+L
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTRE 80
Query: 135 TSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPH 194
+ E+ + GSL D L +G K P + + + A+G+ Y+ K +
Sbjct: 81 EPIYIITEYMAKGSLLDFLKSDEGGKVLLP-------KLIDFSAQIAEGMAYIERK---N 130
Query: 195 IIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
IHRD++++NVL+ + + KIADF L+ D
Sbjct: 131 YIHRDLRAANVLVSESLMCKIADFGLARVIED 162
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 85/182 (46%), Gaps = 20/182 (10%)
Query: 74 LIGEGSYGRVYYGILKSGHA----AAIKKLDA--SKQPDEEFLAQVSMVSRLKHENFVQL 127
+IG G +G V G LK AIK L + +++ +FL++ S++ + H N + L
Sbjct: 40 VIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHL 99
Query: 128 LGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYL 187
G T ++ EF NGSL L G + Q V + G A G++YL
Sbjct: 100 EGVVTKSTPVMIITEFMENGSLDSFLRQNDG--------QFTVIQLVGMLRGIAAGMKYL 151
Query: 188 HEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLG---TFGYHA 244
AD + +HRD+ + N+L+ + V K++DF LS D + T LG + A
Sbjct: 152 ---ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTA 208
Query: 245 PE 246
PE
Sbjct: 209 PE 210
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 76/155 (49%), Gaps = 14/155 (9%)
Query: 75 IGEGSYGRVYYGILKSGHA-AAIKKLDASKQPD--EEFLAQVSMVSRLKHENFVQLLGYC 131
IG G++G V+ G L++ + A+K + PD +FL + ++ + H N V+L+G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 132 VDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKA 191
+ E G L +GA+ L + +++ AA G+EYL K
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLR----TEGAR----LRVKTLLQMVGDAAAGMEYLESKC 233
Query: 192 DPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
IHRD+ + N L+ + +V KI+DF +S + D
Sbjct: 234 ---CIHRDLAARNCLVTEKNVLKISDFGMSREEAD 265
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 96/190 (50%), Gaps = 21/190 (11%)
Query: 75 IGEGSYGRVYY----GI----LKSGHAAAIKKL--DASKQPDEEFLAQVSMVSRL-KHEN 123
+GEG++G+V GI K A+K L DA+++ + ++++ M+ + KH+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 124 FVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRK--GVKGAQ-----PGPVLSWQQRVKI 176
+ LLG C + +AS G+L + L R+ G++ + P ++++ V
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 177 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRV 236
A+G+EYL A IHRD+ + NVL+ +++V KIADF L+ ++ +T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 237 LGTFGYHAPE 246
+ APE
Sbjct: 220 RLPVKWMAPE 229
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 95/202 (47%), Gaps = 21/202 (10%)
Query: 55 PAISVDELKEITENF-GTNALIGEGSYGRVYYGILKSG----HAAAIKKLDA--SKQPDE 107
P S++ KEI ++ +IG G +G V G LK+ AIK L +++
Sbjct: 1 PWGSMEFAKEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRR 60
Query: 108 EFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPV 167
EFL++ S++ + +H N ++L G + ++ EF NG+L L G
Sbjct: 61 EFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDG--------Q 112
Query: 168 LSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDM 227
+ Q V + G A G+ YL E + +HRD+ + N+L+ + V K++DF LS +
Sbjct: 113 FTVIQLVGMLRGIASGMRYLAEMS---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEEN 169
Query: 228 AARLHSTRVLG---TFGYHAPE 246
++ T LG + APE
Sbjct: 170 SSDPTYTSSLGGKIPIRWTAPE 191
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 76/155 (49%), Gaps = 14/155 (9%)
Query: 75 IGEGSYGRVYYGILKSGHA-AAIKKLDASKQPD--EEFLAQVSMVSRLKHENFVQLLGYC 131
IG G++G V+ G L++ + A+K + PD +FL + ++ + H N V+L+G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 132 VDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKA 191
+ E G L +GA+ L + +++ AA G+EYL K
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLR----TEGAR----LRVKTLLQMVGDAAAGMEYLESKC 233
Query: 192 DPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
IHRD+ + N L+ + +V KI+DF +S + D
Sbjct: 234 ---CIHRDLAARNCLVTEKNVLKISDFGMSREEAD 265
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 79/160 (49%), Gaps = 18/160 (11%)
Query: 74 LIGEGSYGRVYYGILKSGHA-----AAIKKLDA--SKQPDEEFLAQVSMVSRLKHENFVQ 126
+IG G +G VY G+LK+ AIK L A +++ +FL + ++ + H N ++
Sbjct: 51 VIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIR 110
Query: 127 LLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEY 186
L G ++ E+ NG+L L + G S Q V + G A G++Y
Sbjct: 111 LEGVISKYKPMMIITEYMENGALDKFLREKDGE--------FSVLQLVGMLRGIAAGMKY 162
Query: 187 LHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
L A+ + +HRD+ + N+L+ + V K++DF LS D
Sbjct: 163 L---ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLED 199
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 81/175 (46%), Gaps = 19/175 (10%)
Query: 75 IGEGSYGRVYYGILK-SGHAAAIKKLDASKQPDEEFLAQVSMVSR-LKHENFVQLLGYCV 132
IGEGS G V K +G A+KK+D KQ E L ++ R H+N V + +
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYL 112
Query: 133 DGTSRVLAYEFASNGSLHDIL-HGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKA 191
G + EF G+L DI+ H R ++ +Q + + + L YLH +
Sbjct: 113 VGDELWVVMEFLEGGALTDIVTHTR-----------MNEEQIATVCLSVLRALSYLHNQG 161
Query: 192 DPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
+IHRDIKS ++L+ D K++DF Q + ++GT + APE
Sbjct: 162 ---VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPK--RKXLVGTPYWMAPE 211
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 83/173 (47%), Gaps = 13/173 (7%)
Query: 75 IGEGSYGRVYYGILKSGHAAAIKKL-DASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVD 133
IG GS+G VY G A I K+ D + + + F +V+++ + +H N + +GY
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK 103
Query: 134 GTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADP 193
++ ++ SL+ LH ++ Q + IA A+G++YLH K
Sbjct: 104 DNLAIVT-QWCEGSSLYKHLHVQE--------TKFQMFQLIDIARQTAQGMDYLHAK--- 151
Query: 194 HIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
+IIHRD+KS+N+ + + KI DF L+ + + G+ + APE
Sbjct: 152 NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPE 204
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 85/176 (48%), Gaps = 17/176 (9%)
Query: 58 SVDELKEIT-ENFGTNALIGEGSYGRVYYGIL------KSGHAAAIKKLD--ASKQPDEE 108
S+ +LKE+ +N +G G++G VY G + S A+K L S+Q + +
Sbjct: 20 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 79
Query: 109 FLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVL 168
FL + ++S+ H+N V+ +G + R + E + G L L + + +QP L
Sbjct: 80 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRP-RPSQPS-SL 137
Query: 169 SWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIF---DDDVAKIADFDLS 221
+ + +A A G +YL E H IHRDI + N L+ VAKI DF ++
Sbjct: 138 AMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 190
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 77/160 (48%), Gaps = 11/160 (6%)
Query: 67 ENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQ 126
E+ +G G +G V+ A+K + E FLA+ +++ L+H+ V+
Sbjct: 15 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVK 74
Query: 127 LLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEY 186
L ++ EF + GSL D L +G K QP P L + + A+G+ +
Sbjct: 75 LHAVVTKEPIYIIT-EFMAKGSLLDFLKSDEGSK--QPLPKL-----IDFSAQIAEGMAF 126
Query: 187 LHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
+ ++ + IHRD++++N+L+ V KIADF L+ D
Sbjct: 127 IEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIED 163
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 90/187 (48%), Gaps = 19/187 (10%)
Query: 49 VQPIEVPAISVDELKEITENFGTNALIGEGSYGRVY----YGILKSGHA--AAIKKLDAS 102
+ P ++P E FG +G G++G+V +G+ K A+K L ++
Sbjct: 30 IDPTQLPYNEKWEFPRNNLQFGKT--LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKST 87
Query: 103 KQPDEE--FLAQVSMVSRL-KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGV 159
DE+ ++++ ++S L +HEN V LLG C G ++ E+ G L + L + V
Sbjct: 88 AHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRV 147
Query: 160 KGAQPG-----PVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAK 214
P LS + + + A+G+ +L K + IHRD+ + NVL+ + VAK
Sbjct: 148 LETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAK 204
Query: 215 IADFDLS 221
I DF L+
Sbjct: 205 IGDFGLA 211
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 80/170 (47%), Gaps = 28/170 (16%)
Query: 75 IGEGSYGRVYYGIL------KSGHAAAIKKL-DASKQP-DEEFLAQVSMVSRLKHENFVQ 126
+GE +G+VY G L + A AIK L D ++ P EEF + + +RL+H N V
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 93
Query: 127 LLGYCVDGTSRVLAYEFASNGSLHDILHGR------------KGVKGAQPGPVLSWQQRV 174
LLG + + + S+G LH+ L R + VK A P V
Sbjct: 94 LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDF-----V 148
Query: 175 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQA 224
+ A G+EYL + H++H+D+ + NVL++D KI+D L +
Sbjct: 149 HLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREV 195
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 78/167 (46%), Gaps = 17/167 (10%)
Query: 74 LIGEGSYGRVYYGILK----SGHAAAIKKLDA--SKQPDEEFLAQVSMVSRLKHENFVQL 127
+IG G +G V G LK A AIK L +++ +FL + S++ + H N V L
Sbjct: 50 VIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHL 109
Query: 128 LGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYL 187
G G ++ EF NG+L L G + Q V + G A G+ YL
Sbjct: 110 EGVVTRGKPVMIVIEFMENGALDAFLRKHDG--------QFTVIQLVGMLRGIAAGMRYL 161
Query: 188 HEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 234
AD +HRD+ + N+L+ + V K++DF LS D +++T
Sbjct: 162 ---ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTT 205
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 85/176 (48%), Gaps = 17/176 (9%)
Query: 58 SVDELKEIT-ENFGTNALIGEGSYGRVYYGIL------KSGHAAAIKKLD--ASKQPDEE 108
S+ +LKE+ +N +G G++G VY G + S A+K L S+Q + +
Sbjct: 20 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 79
Query: 109 FLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVL 168
FL + ++S+ H+N V+ +G + R + E + G L L + + +QP L
Sbjct: 80 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRP-RPSQPS-SL 137
Query: 169 SWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIF---DDDVAKIADFDLS 221
+ + +A A G +YL E H IHRDI + N L+ VAKI DF ++
Sbjct: 138 AMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 190
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 85/177 (48%), Gaps = 17/177 (9%)
Query: 58 SVDELKEIT-ENFGTNALIGEGSYGRVYYGILK------SGHAAAIKKLD--ASKQPDEE 108
S+ +LKE+ +N +G G++G VY G + S A+K L S+Q + +
Sbjct: 21 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 80
Query: 109 FLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVL 168
FL + ++S+ H+N V+ +G + R + E + G L L + + +QP L
Sbjct: 81 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRP-RPSQPS-SL 138
Query: 169 SWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIF---DDDVAKIADFDLSN 222
+ + +A A G +YL E H IHRDI + N L+ VAKI DF ++
Sbjct: 139 AMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQ 192
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 85/176 (48%), Gaps = 17/176 (9%)
Query: 58 SVDELKEIT-ENFGTNALIGEGSYGRVYYGIL------KSGHAAAIKKLD--ASKQPDEE 108
S+ +LKE+ +N +G G++G VY G + S A+K L S+Q + +
Sbjct: 35 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 94
Query: 109 FLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVL 168
FL + ++S+ H+N V+ +G + R + E + G L L + + +QP L
Sbjct: 95 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRP-RPSQPS-SL 152
Query: 169 SWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIF---DDDVAKIADFDLS 221
+ + +A A G +YL E H IHRDI + N L+ VAKI DF ++
Sbjct: 153 AMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 205
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 85/177 (48%), Gaps = 17/177 (9%)
Query: 58 SVDELKEIT-ENFGTNALIGEGSYGRVYYGIL------KSGHAAAIKKLD--ASKQPDEE 108
S+ +LKE+ +N +G G++G VY G + S A+K L S+Q + +
Sbjct: 12 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 71
Query: 109 FLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVL 168
FL + ++S+ H+N V+ +G + R + E + G L L + + +QP L
Sbjct: 72 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRP-RPSQPS-SL 129
Query: 169 SWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIF---DDDVAKIADFDLSN 222
+ + +A A G +YL E H IHRDI + N L+ VAKI DF ++
Sbjct: 130 AMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 183
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 85/177 (48%), Gaps = 17/177 (9%)
Query: 58 SVDELKEIT-ENFGTNALIGEGSYGRVYYGILK------SGHAAAIKKLD--ASKQPDEE 108
S+ +LKE+ +N +G G++G VY G + S A+K L S+Q + +
Sbjct: 37 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 96
Query: 109 FLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVL 168
FL + ++S+ H+N V+ +G + R + E + G L L + + +QP L
Sbjct: 97 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRP-RPSQPS-SL 154
Query: 169 SWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIF---DDDVAKIADFDLSN 222
+ + +A A G +YL E H IHRDI + N L+ VAKI DF ++
Sbjct: 155 AMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 208
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 85/176 (48%), Gaps = 17/176 (9%)
Query: 58 SVDELKEIT-ENFGTNALIGEGSYGRVYYGILK------SGHAAAIKKLD--ASKQPDEE 108
S+ +LKE+ +N +G G++G VY G + S A+K L S+Q + +
Sbjct: 21 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 80
Query: 109 FLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVL 168
FL + ++S+ H+N V+ +G + R + E + G L L + + +QP L
Sbjct: 81 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRP-RPSQPS-SL 138
Query: 169 SWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIF---DDDVAKIADFDLS 221
+ + +A A G +YL E H IHRDI + N L+ VAKI DF ++
Sbjct: 139 AMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 191
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 85/177 (48%), Gaps = 17/177 (9%)
Query: 58 SVDELKEIT-ENFGTNALIGEGSYGRVYYGILK------SGHAAAIKKLD--ASKQPDEE 108
S+ +LKE+ +N +G G++G VY G + S A+K L S+Q + +
Sbjct: 38 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 97
Query: 109 FLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVL 168
FL + ++S+ H+N V+ +G + R + E + G L L + + +QP L
Sbjct: 98 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRP-RPSQPS-SL 155
Query: 169 SWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIF---DDDVAKIADFDLSN 222
+ + +A A G +YL E H IHRDI + N L+ VAKI DF ++
Sbjct: 156 AMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 209
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 85/175 (48%), Gaps = 19/175 (10%)
Query: 75 IGEGSYGRVYYGI-LKSGHAAAIKKLDASKQPDEEFLAQVSMVSRL-KHENFVQLLGYCV 132
IG+G+ G VY + + +G AI++++ +QP +E + +V R K+ N V L +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 133 DGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKAD 192
G + E+ + GSL D++ +G Q + + LE+LH
Sbjct: 89 VGDELWVVMEYLAGGSLTDVVTETCMDEG----------QIAAVCRECLQALEFLHSN-- 136
Query: 193 PHIIHRDIKSSNVLIFDDDVAKIADFDLSNQ-APDMAARLHSTRVLGTFGYHAPE 246
+IHR+IKS N+L+ D K+ DF Q P+ + R + ++GT + APE
Sbjct: 137 -QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR---STMVGTPYWMAPE 187
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 85/176 (48%), Gaps = 17/176 (9%)
Query: 58 SVDELKEIT-ENFGTNALIGEGSYGRVYYGILK------SGHAAAIKKLD--ASKQPDEE 108
S+ +LKE+ +N +G G++G VY G + S A+K L S+Q + +
Sbjct: 61 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 120
Query: 109 FLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVL 168
FL + ++S+ H+N V+ +G + R + E + G L L + + +QP L
Sbjct: 121 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRP-RPSQPS-SL 178
Query: 169 SWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIF---DDDVAKIADFDLS 221
+ + +A A G +YL E H IHRDI + N L+ VAKI DF ++
Sbjct: 179 AMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 231
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 77/160 (48%), Gaps = 11/160 (6%)
Query: 67 ENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQ 126
E+ +G G +G V+ A+K + E FLA+ +++ L+H+ V+
Sbjct: 188 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVK 247
Query: 127 LLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEY 186
L ++ EF + GSL D L +G K QP P L + + A+G+ +
Sbjct: 248 LHAVVTKEPIYIIT-EFMAKGSLLDFLKSDEGSK--QPLPKL-----IDFSAQIAEGMAF 299
Query: 187 LHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
+ ++ + IHRD++++N+L+ V KIADF L+ D
Sbjct: 300 IEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIED 336
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 85/177 (48%), Gaps = 17/177 (9%)
Query: 58 SVDELKEIT-ENFGTNALIGEGSYGRVYYGILK------SGHAAAIKKLD--ASKQPDEE 108
S+ +LKE+ +N +G G++G VY G + S A+K L S+Q + +
Sbjct: 47 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 106
Query: 109 FLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVL 168
FL + ++S+ H+N V+ +G + R + E + G L L + + +QP L
Sbjct: 107 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRP-RPSQPS-SL 164
Query: 169 SWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIF---DDDVAKIADFDLSN 222
+ + +A A G +YL E H IHRDI + N L+ VAKI DF ++
Sbjct: 165 AMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 218
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 92/192 (47%), Gaps = 19/192 (9%)
Query: 52 IEVPAISVDEL-KEI-TENFGTNALIGEGSYGRVYYGILKSGH----AAAIKKLDA--SK 103
E P +V E KE+ N + ++G G +G V G LK + AIK L ++
Sbjct: 28 FEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE 87
Query: 104 QPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQ 163
+ +FL + S++ + H N ++L G ++ E+ NGSL L RK AQ
Sbjct: 88 KQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RK--HDAQ 143
Query: 164 PGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQ 223
+ Q V + G A G++YL +D +HRD+ + N+LI + V K++DF LS
Sbjct: 144 ----FTVIQLVGMLRGIASGMKYL---SDMGFVHRDLAARNILINSNLVCKVSDFGLSRV 196
Query: 224 APDMAARLHSTR 235
D ++TR
Sbjct: 197 LEDDPEAAYTTR 208
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 76/156 (48%), Gaps = 11/156 (7%)
Query: 67 ENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQ 126
E+ +G G +G V+ A+K + E FLA+ +++ L+H+ V+
Sbjct: 182 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVK 241
Query: 127 LLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEY 186
L ++ EF + GSL D L +G K QP P L + + A+G+ +
Sbjct: 242 LHAVVTKEPIYIIT-EFMAKGSLLDFLKSDEGSK--QPLPKL-----IDFSAQIAEGMAF 293
Query: 187 LHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSN 222
+ ++ + IHRD++++N+L+ V KIADF L+
Sbjct: 294 IEQR---NYIHRDLRAANILVSASLVCKIADFGLAR 326
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 80/170 (47%), Gaps = 28/170 (16%)
Query: 75 IGEGSYGRVYYGIL------KSGHAAAIKKL-DASKQP-DEEFLAQVSMVSRLKHENFVQ 126
+GE +G+VY G L + A AIK L D ++ P EEF + + +RL+H N V
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 76
Query: 127 LLGYCVDGTSRVLAYEFASNGSLHDILHGR------------KGVKGAQPGPVLSWQQRV 174
LLG + + + S+G LH+ L R + VK A P V
Sbjct: 77 LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDF-----V 131
Query: 175 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQA 224
+ A G+EYL + H++H+D+ + NVL++D KI+D L +
Sbjct: 132 HLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREV 178
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 85/176 (48%), Gaps = 17/176 (9%)
Query: 58 SVDELKEIT-ENFGTNALIGEGSYGRVYYGILK------SGHAAAIKKLD--ASKQPDEE 108
S+ +LKE+ +N +G G++G VY G + S A+K L S+Q + +
Sbjct: 27 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 86
Query: 109 FLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVL 168
FL + ++S+ H+N V+ +G + R + E + G L L + + +QP L
Sbjct: 87 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRP-RPSQPS-SL 144
Query: 169 SWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIF---DDDVAKIADFDLS 221
+ + +A A G +YL E H IHRDI + N L+ VAKI DF ++
Sbjct: 145 AMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 197
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 83/189 (43%), Gaps = 25/189 (13%)
Query: 64 EITENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKL---DASKQPDEEFLAQVSMVSRL 119
E EN G L+GEGSYG V K +G AIKK D K + + ++ ++ +L
Sbjct: 25 EKYENLG---LVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQL 81
Query: 120 KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVG 179
+HEN V LL C L +EF + L D+ G L +Q K
Sbjct: 82 RHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNG---------LDYQVVQKYLFQ 132
Query: 180 AAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQ--APDMAARLHSTRVL 237
G+ + H +IIHRDIK N+L+ V K+ DF + AP ++ V
Sbjct: 133 IINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAP---GEVYDDEV- 185
Query: 238 GTFGYHAPE 246
T Y APE
Sbjct: 186 ATRWYRAPE 194
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 81/162 (50%), Gaps = 17/162 (10%)
Query: 75 IGEGSYGRVY----YGI--LKSGHAAAIKKL-DASKQPDEEFLAQVSMVSRLKHENFVQL 127
+GEG++G+V+ Y + K A+K L D + ++F + +++ L+HE+ V+
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 128 LGYCVDGTSRVLAYEFASNGSLHDIL--HGRKGV-----KGAQPGPVLSWQQRVKIAVGA 180
G C DG ++ +E+ +G L+ L HG + + Q L Q + IA
Sbjct: 83 YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQI 142
Query: 181 AKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSN 222
A G+ YL A H +HRD+ + N L+ + + KI DF +S
Sbjct: 143 ASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSR 181
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 75/159 (47%), Gaps = 17/159 (10%)
Query: 74 LIGEGSYGRVYYGILK----SGHAAAIKKLDA--SKQPDEEFLAQVSMVSRLKHENFVQL 127
+IG G G V YG L+ AIK L A +++ +FL++ S++ + H N ++L
Sbjct: 56 IIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRL 115
Query: 128 LGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYL 187
G G ++ E+ NGSL L G + Q V + G G+ YL
Sbjct: 116 EGVVTRGRLAMIVTEYMENGSLDTFLRTHDG--------QFTIMQLVGMLRGVGAGMRYL 167
Query: 188 HEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
+D +HRD+ + NVL+ + V K++DF LS D
Sbjct: 168 ---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLED 203
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 75/159 (47%), Gaps = 17/159 (10%)
Query: 74 LIGEGSYGRVYYGILK----SGHAAAIKKLDA--SKQPDEEFLAQVSMVSRLKHENFVQL 127
+IG G G V YG L+ AIK L A +++ +FL++ S++ + H N ++L
Sbjct: 56 IIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRL 115
Query: 128 LGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYL 187
G G ++ E+ NGSL L G + Q V + G G+ YL
Sbjct: 116 EGVVTRGRLAMIVTEYMENGSLDTFLRTHDG--------QFTIMQLVGMLRGVGAGMRYL 167
Query: 188 HEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
+D +HRD+ + NVL+ + V K++DF LS D
Sbjct: 168 ---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLED 203
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 85/176 (48%), Gaps = 17/176 (9%)
Query: 58 SVDELKEIT-ENFGTNALIGEGSYGRVYYGIL------KSGHAAAIKKLDA--SKQPDEE 108
S+ +LKE+ +N +G G++G VY G + S A+K L S+Q + +
Sbjct: 35 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELD 94
Query: 109 FLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVL 168
FL + ++S+ H+N V+ +G + R + E + G L L + + +QP L
Sbjct: 95 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRP-RPSQPS-SL 152
Query: 169 SWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIF---DDDVAKIADFDLS 221
+ + +A A G +YL E H IHRDI + N L+ VAKI DF ++
Sbjct: 153 AMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 205
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 85/175 (48%), Gaps = 17/175 (9%)
Query: 75 IGEGSYGRVYYGILKSGHAAAIKKLDAS---KQPDEEFLAQVSMVSRLKHENFVQLLGYC 131
IG GS+G VY G K A+K L+ + Q + F +V ++ + +H N + +GY
Sbjct: 16 IGSGSFGTVYKG--KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 132 VDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKA 191
++ ++ SL+ LH + + + IA A+G++YLH K+
Sbjct: 74 TKPQLAIVT-QWCEGSSLYHHLHIIETK--------FEMIKLIDIARQTAQGMDYLHAKS 124
Query: 192 DPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
IIHRD+KS+N+ + +D KI DF L+ + + ++ G+ + APE
Sbjct: 125 ---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPE 176
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 82/182 (45%), Gaps = 26/182 (14%)
Query: 78 GSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTS- 136
G +G V+ L + + A +K + + +V + +KHEN +Q +G GTS
Sbjct: 35 GRFGCVWKAQLLNEYVA-VKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSV 93
Query: 137 ---RVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKA-- 191
L F GSL D L V+SW + IA A+GL YLHE
Sbjct: 94 DVDLWLITAFHEKGSLSDFLKAN----------VVSWNELCHIAETMARGLAYLHEDIPG 143
Query: 192 -----DPHIIHRDIKSSNVLIFDDDVAKIADFDLS--NQAPDMAARLHSTRVLGTFGYHA 244
P I HRDIKS NVL+ ++ A IADF L+ +A A H +GT Y A
Sbjct: 144 LKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQ--VGTRRYMA 201
Query: 245 PE 246
PE
Sbjct: 202 PE 203
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 92/192 (47%), Gaps = 19/192 (9%)
Query: 52 IEVPAISVDEL-KEI-TENFGTNALIGEGSYGRVYYGILKSGH----AAAIKKLDA--SK 103
E P +V E KE+ N + ++G G +G V G LK + AIK L ++
Sbjct: 28 FEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE 87
Query: 104 QPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQ 163
+ +FL + S++ + H N ++L G ++ E+ NGSL L RK AQ
Sbjct: 88 KQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RK--HDAQ 143
Query: 164 PGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQ 223
+ Q V + G A G++YL +D +HRD+ + N+LI + V K++DF LS
Sbjct: 144 ----FTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRV 196
Query: 224 APDMAARLHSTR 235
D ++TR
Sbjct: 197 LEDDPEAAYTTR 208
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 92/192 (47%), Gaps = 19/192 (9%)
Query: 52 IEVPAISVDEL-KEI-TENFGTNALIGEGSYGRVYYGILKSGH----AAAIKKLDA--SK 103
E P +V E KE+ N + ++G G +G V G LK + AIK L ++
Sbjct: 28 FEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE 87
Query: 104 QPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQ 163
+ +FL + S++ + H N ++L G ++ E+ NGSL L RK AQ
Sbjct: 88 KQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RK--HDAQ 143
Query: 164 PGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQ 223
+ Q V + G A G++YL +D +HRD+ + N+LI + V K++DF LS
Sbjct: 144 ----FTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRV 196
Query: 224 APDMAARLHSTR 235
D ++TR
Sbjct: 197 LEDDPEAAYTTR 208
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 92/191 (48%), Gaps = 19/191 (9%)
Query: 53 EVPAISVDEL-KEI-TENFGTNALIGEGSYGRVYYGILKSGH----AAAIKKLDA--SKQ 104
E P +V E KE+ N + ++G G +G V G LK + AIK L +++
Sbjct: 29 EDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK 88
Query: 105 PDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQP 164
+FL + S++ + H N ++L G ++ E+ NGSL L RK AQ
Sbjct: 89 QRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RK--HDAQ- 143
Query: 165 GPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQA 224
+ Q V + G A G++YL +D +HRD+ + N+LI + V K++DF LS
Sbjct: 144 ---FTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL 197
Query: 225 PDMAARLHSTR 235
D ++TR
Sbjct: 198 EDDPEAAYTTR 208
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 92/191 (48%), Gaps = 19/191 (9%)
Query: 53 EVPAISVDEL-KEI-TENFGTNALIGEGSYGRVYYGILKSGH----AAAIKKLDA--SKQ 104
E P +V E KE+ N + ++G G +G V G LK + AIK L +++
Sbjct: 29 EDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK 88
Query: 105 PDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQP 164
+FL + S++ + H N ++L G ++ E+ NGSL L RK AQ
Sbjct: 89 QRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RK--HDAQ- 143
Query: 165 GPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQA 224
+ Q V + G A G++YL +D +HRD+ + N+LI + V K++DF LS
Sbjct: 144 ---FTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL 197
Query: 225 PDMAARLHSTR 235
D ++TR
Sbjct: 198 EDDPEAAYTTR 208
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 80/191 (41%), Gaps = 25/191 (13%)
Query: 63 KEITENFGTNALIGEGSYGRVYYGILKSG-HAAAIKKLDASKQPDE----EFLAQVSMVS 117
K ++F +G+G +G VY K A+K L S+ E + ++ + S
Sbjct: 11 KFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQS 70
Query: 118 RLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDIL--HGRKGVKGAQPGPVLSWQQRVK 175
L+H N +++ Y D L EFA G L+ L HGR Q+
Sbjct: 71 HLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR-----------FDEQRSAT 119
Query: 176 IAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTR 235
A L Y HE+ +IHRDIK N+L+ KIADF S AP + R
Sbjct: 120 FMEELADALHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRX---- 172
Query: 236 VLGTFGYHAPE 246
+ GT Y PE
Sbjct: 173 MCGTLDYLPPE 183
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 92/191 (48%), Gaps = 19/191 (9%)
Query: 53 EVPAISVDEL-KEI-TENFGTNALIGEGSYGRVYYGILKSGH----AAAIKKLDA--SKQ 104
E P +V E KE+ N + ++G G +G V G LK + AIK L +++
Sbjct: 27 EDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK 86
Query: 105 PDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQP 164
+FL + S++ + H N ++L G ++ E+ NGSL L RK AQ
Sbjct: 87 QRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RK--HDAQF 142
Query: 165 GPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQA 224
+ Q V + G A G++YL +D +HRD+ + N+LI + V K++DF LS
Sbjct: 143 TVI----QLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL 195
Query: 225 PDMAARLHSTR 235
D ++TR
Sbjct: 196 EDDPEAAYTTR 206
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 80/191 (41%), Gaps = 25/191 (13%)
Query: 63 KEITENFGTNALIGEGSYGRVYYGILKSG-HAAAIKKLDASKQPDE----EFLAQVSMVS 117
K ++F +G+G +G VY K A+K L S+ E + ++ + S
Sbjct: 10 KFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQS 69
Query: 118 RLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDIL--HGRKGVKGAQPGPVLSWQQRVK 175
L+H N +++ Y D L EFA G L+ L HGR Q+
Sbjct: 70 HLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR-----------FDEQRSAT 118
Query: 176 IAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTR 235
A L Y HE+ +IHRDIK N+L+ KIADF S AP + R
Sbjct: 119 FMEELADALHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRX---- 171
Query: 236 VLGTFGYHAPE 246
+ GT Y PE
Sbjct: 172 MCGTLDYLPPE 182
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 85/175 (48%), Gaps = 17/175 (9%)
Query: 75 IGEGSYGRVYYGILKSGHAAAIKKLDAS---KQPDEEFLAQVSMVSRLKHENFVQLLGYC 131
IG GS+G VY G K A+K L+ + Q + F +V ++ + +H N + +GY
Sbjct: 44 IGSGSFGTVYKG--KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 132 VDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKA 191
++ ++ SL+ LH + + + IA A+G++YLH K+
Sbjct: 102 TKPQLAIVT-QWCEGSSLYHHLHIIE--------TKFEMIKLIDIARQTAQGMDYLHAKS 152
Query: 192 DPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
IIHRD+KS+N+ + +D KI DF L+ + + ++ G+ + APE
Sbjct: 153 ---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPE 204
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 85/175 (48%), Gaps = 17/175 (9%)
Query: 75 IGEGSYGRVYYGILKSGHAAAIKKLDAS---KQPDEEFLAQVSMVSRLKHENFVQLLGYC 131
IG GS+G VY G K A+K L+ + Q + F +V ++ + +H N + +GY
Sbjct: 36 IGSGSFGTVYKG--KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 93
Query: 132 VDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKA 191
++ ++ SL+ LH + + + IA A+G++YLH K+
Sbjct: 94 TKPQLAIVT-QWCEGSSLYHHLHIIE--------TKFEMIKLIDIARQTAQGMDYLHAKS 144
Query: 192 DPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
IIHRD+KS+N+ + +D KI DF L+ + + ++ G+ + APE
Sbjct: 145 ---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPE 196
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 82/174 (47%), Gaps = 17/174 (9%)
Query: 68 NFGTNALIGEGSYGRVYYGILKSGH----AAAIKKLDA--SKQPDEEFLAQVSMVSRLKH 121
N + ++G G +G V G LK + AIK L +++ +FL + S++ + H
Sbjct: 34 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 93
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAA 181
N ++L G ++ E+ NGSL L AQ + Q V + G A
Sbjct: 94 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD----AQFTVI----QLVGMLRGIA 145
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTR 235
G++YL +D +HRD+ + N+LI + V K++DF LS D ++TR
Sbjct: 146 SGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 196
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 82/174 (47%), Gaps = 17/174 (9%)
Query: 68 NFGTNALIGEGSYGRVYYGILKSGH----AAAIKKLDA--SKQPDEEFLAQVSMVSRLKH 121
N + ++G G +G V G LK + AIK L +++ +FL + S++ + H
Sbjct: 17 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 76
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAA 181
N ++L G ++ E+ NGSL L AQ + Q V + G A
Sbjct: 77 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD----AQFTVI----QLVGMLRGIA 128
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTR 235
G++YL +D +HRD+ + N+LI + V K++DF LS D ++TR
Sbjct: 129 SGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 179
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 80/191 (41%), Gaps = 25/191 (13%)
Query: 63 KEITENFGTNALIGEGSYGRVYYGILKSG-HAAAIKKLDASKQPDE----EFLAQVSMVS 117
K ++F +G+G +G VY K A+K L S+ E + ++ + S
Sbjct: 10 KFTIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQS 69
Query: 118 RLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDIL--HGRKGVKGAQPGPVLSWQQRVK 175
L+H N +++ Y D L EFA G L+ L HGR Q+
Sbjct: 70 HLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR-----------FDEQRSAT 118
Query: 176 IAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTR 235
A L Y HE+ +IHRDIK N+L+ KIADF S AP + R
Sbjct: 119 FMEELADALHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRX---- 171
Query: 236 VLGTFGYHAPE 246
+ GT Y PE
Sbjct: 172 MCGTLDYLPPE 182
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 90/187 (48%), Gaps = 19/187 (10%)
Query: 49 VQPIEVPAISVDELKEITENFGTNALIGEGSYGRVY----YGILKSGHA--AAIKKLDAS 102
+ P ++P E FG +G G++G+V +G+ K A+K L ++
Sbjct: 30 IDPTQLPYNEKWEFPRNNLQFGKT--LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKST 87
Query: 103 KQPDEE--FLAQVSMVSRL-KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGV 159
DE+ ++++ ++S L +HEN V LLG C G ++ E+ G L + L + V
Sbjct: 88 AHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRV 147
Query: 160 KGAQPGPVL-----SWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAK 214
P + S + + + A+G+ +L K + IHRD+ + NVL+ + VAK
Sbjct: 148 LETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAK 204
Query: 215 IADFDLS 221
I DF L+
Sbjct: 205 IGDFGLA 211
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 92/181 (50%), Gaps = 31/181 (17%)
Query: 75 IGEGSYGRVYYGI-LKSGHAAAIKKLDAS-KQPDEEF---LAQVSMVSRLKHENFVQLLG 129
IG GS+G VY+ +++ AIKK+ S KQ +E++ + +V + +L+H N +Q G
Sbjct: 62 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 121
Query: 130 YCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAV---GAAKGLEY 186
+ + L E+ GS D+L K P+ Q V+IA GA +GL Y
Sbjct: 122 CYLREHTAWLVMEYCL-GSASDLLEVHKK-------PL----QEVEIAAVTHGALQGLAY 169
Query: 187 LHEKADPHIIHRDIKSSNVLIFDDDVAKIADF-DLSNQAPDMAARLHSTRVLGTFGYHAP 245
LH ++IHRD+K+ N+L+ + + K+ DF S AP + +GT + AP
Sbjct: 170 LHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP-------ANXFVGTPYWMAP 219
Query: 246 E 246
E
Sbjct: 220 E 220
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 84/182 (46%), Gaps = 20/182 (10%)
Query: 74 LIGEGSYGRVYYGILKSGHA----AAIKKLDA--SKQPDEEFLAQVSMVSRLKHENFVQL 127
+IG G +G V G LK AIK L + +++ +FL++ S++ + H N + L
Sbjct: 14 VIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHL 73
Query: 128 LGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYL 187
G T ++ EF NGSL L G + Q V + G A G++YL
Sbjct: 74 EGVVTKSTPVMIITEFMENGSLDSFLRQNDG--------QFTVIQLVGMLRGIAAGMKYL 125
Query: 188 HEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLG---TFGYHA 244
AD + +HR + + N+L+ + V K++DF LS D + T LG + A
Sbjct: 126 ---ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTA 182
Query: 245 PE 246
PE
Sbjct: 183 PE 184
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 78/185 (42%), Gaps = 21/185 (11%)
Query: 67 ENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQP----DEEFLAQVSMVSRLKH 121
E+F +G+G +G VY K S A+K L ++ + + +V + S L+H
Sbjct: 13 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 72
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAA 181
N ++L GY D T L E+A G ++ K Q Q+ A
Sbjct: 73 PNILRLYGYFHDATRVYLILEYAPRGEVY---------KELQKLSKFDEQRTATYITELA 123
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 241
L Y H K +IHRDIK N+L+ KIADF S AP T + GT
Sbjct: 124 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTLD 176
Query: 242 YHAPE 246
Y PE
Sbjct: 177 YLPPE 181
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 92/192 (47%), Gaps = 19/192 (9%)
Query: 52 IEVPAISVDEL-KEI-TENFGTNALIGEGSYGRVYYGILKSGH----AAAIKKLDA--SK 103
E P +V E KE+ N + ++G G +G V G LK + AIK L ++
Sbjct: 28 FEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE 87
Query: 104 QPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQ 163
+ +FL + S++ + H N ++L G ++ E+ NGSL L RK AQ
Sbjct: 88 KQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RK--HDAQ 143
Query: 164 PGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQ 223
+ Q V + G A G++YL +D +HRD+ + N+LI + V K++DF L+
Sbjct: 144 ----FTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLARV 196
Query: 224 APDMAARLHSTR 235
D ++TR
Sbjct: 197 LEDDPEAAYTTR 208
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 86/185 (46%), Gaps = 15/185 (8%)
Query: 65 ITENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQPD--EEFLAQVSMVSRLKH 121
E++ +GEG+YG V + + + A A+K +D + D E ++ + + L H
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNH 64
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAA 181
EN V+ G+ +G + L E+ S G L D + G+ P P QR + A
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM----PEPD---AQRFFHQLMA- 116
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 241
G+ YLH I HRDIK N+L+ + D KI+DF L+ ++ GT
Sbjct: 117 -GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 172
Query: 242 YHAPE 246
Y APE
Sbjct: 173 YVAPE 177
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 94/197 (47%), Gaps = 23/197 (11%)
Query: 42 KGAQAVKVQPIEVPAISVDELKEITENFGTNALIGEGSYGRVY----YGILKSGHA--AA 95
+G + P ++P E FG +G G++G+V +G+ K A
Sbjct: 23 EGNSYTFIDPTQLPYNEKWEFPRNNLQFGKT--LGAGAFGKVVEATAFGLGKEDAVLKVA 80
Query: 96 IKKLDASKQPDEE--FLAQVSMVSRL-KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDI 152
+K L ++ DE+ ++++ ++S L +HEN V LLG C G ++ E+ G L +
Sbjct: 81 VKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNF 140
Query: 153 LHGRKGVKGAQ--------PGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSN 204
L RK G + P LS + + + A+G+ +L K + IHRD+ + N
Sbjct: 141 LR-RKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLASK---NCIHRDVAARN 196
Query: 205 VLIFDDDVAKIADFDLS 221
VL+ + VAKI DF L+
Sbjct: 197 VLLTNGHVAKIGDFGLA 213
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 84/175 (48%), Gaps = 17/175 (9%)
Query: 75 IGEGSYGRVYYGILKSGHAAAIKKLDAS---KQPDEEFLAQVSMVSRLKHENFVQLLGYC 131
IG GS+G VY G K A+K L+ + Q + F +V ++ + +H N + +GY
Sbjct: 16 IGSGSFGTVYKG--KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 132 VDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKA 191
++ ++ SL+ LH + + + IA A+G++YLH K+
Sbjct: 74 TKPQLAIVT-QWCEGSSLYHHLHIIETK--------FEMIKLIDIARQTAQGMDYLHAKS 124
Query: 192 DPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
IIHRD+KS+N+ + +D KI DF L+ + ++ G+ + APE
Sbjct: 125 ---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 176
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 84/175 (48%), Gaps = 17/175 (9%)
Query: 75 IGEGSYGRVYYGILKSGHAAAIKKLDAS---KQPDEEFLAQVSMVSRLKHENFVQLLGYC 131
IG GS+G VY G K A+K L+ + Q + F +V ++ + +H N + +GY
Sbjct: 21 IGSGSFGTVYKG--KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 132 VDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKA 191
++ ++ SL+ LH + + + IA A+G++YLH K+
Sbjct: 79 TKPQLAIVT-QWCEGSSLYHHLHIIETK--------FEMIKLIDIARQTAQGMDYLHAKS 129
Query: 192 DPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
IIHRD+KS+N+ + +D KI DF L+ + ++ G+ + APE
Sbjct: 130 ---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 181
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 85/185 (45%), Gaps = 15/185 (8%)
Query: 65 ITENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQPD--EEFLAQVSMVSRLKH 121
E++ +GEG+YG V + + + A A+K +D + D E ++ + L H
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAA 181
EN V+ G+ +G + L E+ S G L D + G+ P P QR + A
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM----PEPD---AQRFFHQLMA- 115
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 241
G+ YLH I HRDIK N+L+ + D KI+DF L+ ++ GT
Sbjct: 116 -GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 171
Query: 242 YHAPE 246
Y APE
Sbjct: 172 YVAPE 176
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 92/181 (50%), Gaps = 31/181 (17%)
Query: 75 IGEGSYGRVYYGI-LKSGHAAAIKKLDAS-KQPDEEF---LAQVSMVSRLKHENFVQLLG 129
IG GS+G VY+ +++ AIKK+ S KQ +E++ + +V + +L+H N +Q G
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 82
Query: 130 YCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAV---GAAKGLEY 186
+ + L E+ GS D+L K P+ Q V+IA GA +GL Y
Sbjct: 83 CYLREHTAWLVMEYCL-GSASDLLEVHKK-------PL----QEVEIAAVTHGALQGLAY 130
Query: 187 LHEKADPHIIHRDIKSSNVLIFDDDVAKIADF-DLSNQAPDMAARLHSTRVLGTFGYHAP 245
LH ++IHRD+K+ N+L+ + + K+ DF S AP + +GT + AP
Sbjct: 131 LHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP-------ANXFVGTPYWMAP 180
Query: 246 E 246
E
Sbjct: 181 E 181
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 85/185 (45%), Gaps = 15/185 (8%)
Query: 65 ITENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQPD--EEFLAQVSMVSRLKH 121
E++ +GEG+YG V + + + A A+K +D + D E ++ + L H
Sbjct: 3 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 62
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAA 181
EN V+ G+ +G + L E+ S G L D + G+ P P QR + A
Sbjct: 63 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM----PEPD---AQRFFHQLMA- 114
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 241
G+ YLH I HRDIK N+L+ + D KI+DF L+ ++ GT
Sbjct: 115 -GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 170
Query: 242 YHAPE 246
Y APE
Sbjct: 171 YVAPE 175
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 84/175 (48%), Gaps = 17/175 (9%)
Query: 75 IGEGSYGRVYYGILKSGHAAAIKKLDAS---KQPDEEFLAQVSMVSRLKHENFVQLLGYC 131
IG GS+G VY G K A+K L+ + Q + F +V ++ + +H N + +GY
Sbjct: 21 IGSGSFGTVYKG--KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 132 VDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKA 191
++ ++ SL+ LH + + + IA A+G++YLH K+
Sbjct: 79 TKPQLAIVT-QWCEGSSLYHHLHIIE--------TKFEMIKLIDIARQTAQGMDYLHAKS 129
Query: 192 DPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
IIHRD+KS+N+ + +D KI DF L+ + ++ G+ + APE
Sbjct: 130 ---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 181
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 85/185 (45%), Gaps = 15/185 (8%)
Query: 65 ITENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQPD--EEFLAQVSMVSRLKH 121
E++ +GEG+YG V + + + A A+K +D + D E ++ + L H
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 64
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAA 181
EN V+ G+ +G + L E+ S G L D + G+ P P QR + A
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM----PEPD---AQRFFHQLMA- 116
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 241
G+ YLH I HRDIK N+L+ + D KI+DF L+ ++ GT
Sbjct: 117 -GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 172
Query: 242 YHAPE 246
Y APE
Sbjct: 173 YVAPE 177
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 85/185 (45%), Gaps = 15/185 (8%)
Query: 65 ITENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQPD--EEFLAQVSMVSRLKH 121
E++ +GEG+YG V + + + A A+K +D + D E ++ + L H
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 64
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAA 181
EN V+ G+ +G + L E+ S G L D + G+ P P QR + A
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM----PEPD---AQRFFHQLMA- 116
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 241
G+ YLH I HRDIK N+L+ + D KI+DF L+ ++ GT
Sbjct: 117 -GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 172
Query: 242 YHAPE 246
Y APE
Sbjct: 173 YVAPE 177
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 80/185 (43%), Gaps = 21/185 (11%)
Query: 67 ENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQP----DEEFLAQVSMVSRLKH 121
E+F +G+G +G VY + S A+K L ++ + + +V + S L+H
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAA 181
N ++L GY D T L E+A G+++ + Q Q+ A
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVY---------RELQKLSRFDEQRTATYITELA 122
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 241
L Y H K +IHRDIK N+L+ + KIADF S AP T + GT
Sbjct: 123 NALSYCHSK---RVIHRDIKPENLLLGSNGELKIADFGWSVHAPSS----RRTTLCGTLD 175
Query: 242 YHAPE 246
Y PE
Sbjct: 176 YLPPE 180
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 85/185 (45%), Gaps = 15/185 (8%)
Query: 65 ITENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQPD--EEFLAQVSMVSRLKH 121
E++ +GEG+YG V + + + A A+K +D + D E ++ + L H
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 64
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAA 181
EN V+ G+ +G + L E+ S G L D + G+ P P QR + A
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM----PEPD---AQRFFHQLMA- 116
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 241
G+ YLH I HRDIK N+L+ + D KI+DF L+ ++ GT
Sbjct: 117 -GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 172
Query: 242 YHAPE 246
Y APE
Sbjct: 173 YVAPE 177
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 83/175 (47%), Gaps = 17/175 (9%)
Query: 75 IGEGSYGRVYYGILKSGHAAAIKKLDAS---KQPDEEFLAQVSMVSRLKHENFVQLLGYC 131
IG GS+G VY G K A+K L+ + Q + F +V ++ + +H N + +GY
Sbjct: 16 IGSGSFGTVYKG--KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 132 VDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKA 191
+ ++ SL+ LH + + + IA A+G++YLH K+
Sbjct: 74 T-APQLAIVTQWCEGSSLYHHLHIIETK--------FEMIKLIDIARQTAQGMDYLHAKS 124
Query: 192 DPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
IIHRD+KS+N+ + +D KI DF L+ + ++ G+ + APE
Sbjct: 125 ---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 176
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 84/175 (48%), Gaps = 17/175 (9%)
Query: 75 IGEGSYGRVYYGILKSGHAAAIKKLDAS---KQPDEEFLAQVSMVSRLKHENFVQLLGYC 131
IG GS+G VY G K A+K L+ + Q + F +V ++ + +H N + +GY
Sbjct: 18 IGSGSFGTVYKG--KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 75
Query: 132 VDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKA 191
++ ++ SL+ LH + + + IA A+G++YLH K+
Sbjct: 76 TKPQLAIVT-QWCEGSSLYHHLHIIETK--------FEMIKLIDIARQTAQGMDYLHAKS 126
Query: 192 DPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
IIHRD+KS+N+ + +D KI DF L+ + ++ G+ + APE
Sbjct: 127 ---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 178
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 85/185 (45%), Gaps = 15/185 (8%)
Query: 65 ITENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQPD--EEFLAQVSMVSRLKH 121
E++ +GEG+YG V + + + A A+K +D + D E ++ + L H
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAA 181
EN V+ G+ +G + L E+ S G L D + G+ P P QR + A
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM----PEPD---AQRFFHQLMA- 115
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 241
G+ YLH I HRDIK N+L+ + D KI+DF L+ ++ GT
Sbjct: 116 -GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 171
Query: 242 YHAPE 246
Y APE
Sbjct: 172 YVAPE 176
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 85/185 (45%), Gaps = 15/185 (8%)
Query: 65 ITENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQPD--EEFLAQVSMVSRLKH 121
E++ +GEG+YG V + + + A A+K +D + D E ++ + L H
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 64
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAA 181
EN V+ G+ +G + L E+ S G L D + G+ P P QR + A
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM----PEPD---AQRFFHQLMA- 116
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 241
G+ YLH I HRDIK N+L+ + D KI+DF L+ ++ GT
Sbjct: 117 -GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 172
Query: 242 YHAPE 246
Y APE
Sbjct: 173 YVAPE 177
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 85/185 (45%), Gaps = 15/185 (8%)
Query: 65 ITENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQPD--EEFLAQVSMVSRLKH 121
E++ +GEG+YG V + + + A A+K +D + D E ++ + L H
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAA 181
EN V+ G+ +G + L E+ S G L D + G+ P P QR + A
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM----PEPD---AQRFFHQLMA- 115
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 241
G+ YLH I HRDIK N+L+ + D KI+DF L+ ++ GT
Sbjct: 116 -GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 171
Query: 242 YHAPE 246
Y APE
Sbjct: 172 YVAPE 176
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 91/192 (47%), Gaps = 19/192 (9%)
Query: 52 IEVPAISVDEL-KEI-TENFGTNALIGEGSYGRVYYGILKSGH----AAAIKKLDA--SK 103
E P +V E KE+ N + ++G G +G V G LK + AIK L ++
Sbjct: 28 FEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE 87
Query: 104 QPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQ 163
+ +FL + S++ + H N ++L G ++ E+ NGSL L RK AQ
Sbjct: 88 KQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RK--HDAQ 143
Query: 164 PGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQ 223
+ Q V + G A G++YL +D +HRD+ + N+LI + V K++DF L
Sbjct: 144 ----FTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLGRV 196
Query: 224 APDMAARLHSTR 235
D ++TR
Sbjct: 197 LEDDPEAAYTTR 208
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 85/185 (45%), Gaps = 15/185 (8%)
Query: 65 ITENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQPD--EEFLAQVSMVSRLKH 121
E++ +GEG+YG V + + + A A+K +D + D E ++ + L H
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAA 181
EN V+ G+ +G + L E+ S G L D + G+ P P QR + A
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM----PEPD---AQRFFHQLMA- 115
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 241
G+ YLH I HRDIK N+L+ + D KI+DF L+ ++ GT
Sbjct: 116 -GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 171
Query: 242 YHAPE 246
Y APE
Sbjct: 172 YVAPE 176
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 85/185 (45%), Gaps = 15/185 (8%)
Query: 65 ITENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQPD--EEFLAQVSMVSRLKH 121
E++ +GEG+YG V + + + A A+K +D + D E ++ + L H
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 64
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAA 181
EN V+ G+ +G + L E+ S G L D + G+ P P QR + A
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM----PEPD---AQRFFHQLMA- 116
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 241
G+ YLH I HRDIK N+L+ + D KI+DF L+ ++ GT
Sbjct: 117 -GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 172
Query: 242 YHAPE 246
Y APE
Sbjct: 173 YVAPE 177
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 85/185 (45%), Gaps = 15/185 (8%)
Query: 65 ITENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQPD--EEFLAQVSMVSRLKH 121
E++ +GEG+YG V + + + A A+K +D + D E ++ + L H
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 64
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAA 181
EN V+ G+ +G + L E+ S G L D + G+ P P QR + A
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM----PEPD---AQRFFHQLMA- 116
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 241
G+ YLH I HRDIK N+L+ + D KI+DF L+ ++ GT
Sbjct: 117 -GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 172
Query: 242 YHAPE 246
Y APE
Sbjct: 173 YVAPE 177
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 85/185 (45%), Gaps = 15/185 (8%)
Query: 65 ITENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQPD--EEFLAQVSMVSRLKH 121
E++ +GEG+YG V + + + A A+K +D + D E ++ + L H
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAA 181
EN V+ G+ +G + L E+ S G L D + G+ P P QR + A
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM----PEPD---AQRFFHQLMA- 115
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 241
G+ YLH I HRDIK N+L+ + D KI+DF L+ ++ GT
Sbjct: 116 -GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 171
Query: 242 YHAPE 246
Y APE
Sbjct: 172 YVAPE 176
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 84/175 (48%), Gaps = 17/175 (9%)
Query: 75 IGEGSYGRVYYGILKSGHAAAIKKLDAS---KQPDEEFLAQVSMVSRLKHENFVQLLGYC 131
IG GS+G VY G K A+K L+ + Q + F +V ++ + +H N + +GY
Sbjct: 44 IGSGSFGTVYKG--KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 132 VDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKA 191
++ ++ SL+ LH + + + IA A+G++YLH K+
Sbjct: 102 TKPQLAIVT-QWCEGSSLYHHLHIIE--------TKFEMIKLIDIARQTAQGMDYLHAKS 152
Query: 192 DPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
IIHRD+KS+N+ + +D KI DF L+ + ++ G+ + APE
Sbjct: 153 ---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 204
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 85/185 (45%), Gaps = 15/185 (8%)
Query: 65 ITENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQPD--EEFLAQVSMVSRLKH 121
E++ +GEG+YG V + + + A A+K +D + D E ++ + L H
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAA 181
EN V+ G+ +G + L E+ S G L D + G+ P P QR + A
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM----PEPD---AQRFFHQLMA- 115
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 241
G+ YLH I HRDIK N+L+ + D KI+DF L+ ++ GT
Sbjct: 116 -GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 171
Query: 242 YHAPE 246
Y APE
Sbjct: 172 YVAPE 176
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 89/192 (46%), Gaps = 19/192 (9%)
Query: 52 IEVPAISVDEL-KEI-TENFGTNALIGEGSYGRVYYGILKSGH----AAAIKKLDA--SK 103
E P +V E KE+ N + ++G G +G V G LK + AIK L ++
Sbjct: 28 FEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE 87
Query: 104 QPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQ 163
+ +FL + S++ + H N ++L G ++ E NGSL L AQ
Sbjct: 88 KQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHD----AQ 143
Query: 164 PGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQ 223
+ Q V + G A G++YL +D +HRD+ + N+LI + V K++DF LS
Sbjct: 144 ----FTVIQLVGMLRGIASGMKYL---SDMGAVHRDLAARNILINSNLVCKVSDFGLSRV 196
Query: 224 APDMAARLHSTR 235
D ++TR
Sbjct: 197 LEDDPEAAYTTR 208
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 84/175 (48%), Gaps = 17/175 (9%)
Query: 75 IGEGSYGRVYYGILKSGHAAAIKKLDAS---KQPDEEFLAQVSMVSRLKHENFVQLLGYC 131
IG GS+G VY G K A+K L+ + Q + F +V ++ + +H N + +GY
Sbjct: 43 IGSGSFGTVYKG--KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 100
Query: 132 VDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKA 191
++ ++ SL+ LH + + + IA A+G++YLH K+
Sbjct: 101 TKPQLAIVT-QWCEGSSLYHHLHIIE--------TKFEMIKLIDIARQTAQGMDYLHAKS 151
Query: 192 DPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
IIHRD+KS+N+ + +D KI DF L+ + ++ G+ + APE
Sbjct: 152 ---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 203
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 89/191 (46%), Gaps = 19/191 (9%)
Query: 53 EVPAISVDEL-KEI-TENFGTNALIGEGSYGRVYYGILKSGH----AAAIKKLDA--SKQ 104
E P +V E KE+ N + ++G G +G V G LK + AIK L +++
Sbjct: 29 EDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK 88
Query: 105 PDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQP 164
+FL + S++ + H N ++L G ++ E NGSL L AQ
Sbjct: 89 QRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHD----AQ- 143
Query: 165 GPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQA 224
+ Q V + G A G++YL +D +HRD+ + N+LI + V K++DF LS
Sbjct: 144 ---FTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL 197
Query: 225 PDMAARLHSTR 235
D ++TR
Sbjct: 198 EDDPEAAYTTR 208
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 85/185 (45%), Gaps = 15/185 (8%)
Query: 65 ITENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQPD--EEFLAQVSMVSRLKH 121
E++ +GEG+YG V + + + A A+K +D + D E ++ + L H
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNH 63
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAA 181
EN V+ G+ +G + L E+ S G L D + G+ P P QR + A
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM----PEPD---AQRFFHQLMA- 115
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 241
G+ YLH I HRDIK N+L+ + D KI+DF L+ ++ GT
Sbjct: 116 -GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 171
Query: 242 YHAPE 246
Y APE
Sbjct: 172 YVAPE 176
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 85/185 (45%), Gaps = 15/185 (8%)
Query: 65 ITENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQPD--EEFLAQVSMVSRLKH 121
E++ +GEG+YG V + + + A A+K +D + D E ++ + L H
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAA 181
EN V+ G+ +G + L E+ S G L D + G+ P P QR + A
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM----PEPD---AQRFFHQLMA- 115
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 241
G+ YLH I HRDIK N+L+ + D KI+DF L+ ++ GT
Sbjct: 116 -GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLP 171
Query: 242 YHAPE 246
Y APE
Sbjct: 172 YVAPE 176
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 85/185 (45%), Gaps = 15/185 (8%)
Query: 65 ITENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQPD--EEFLAQVSMVSRLKH 121
E++ +GEG+YG V + + + A A+K +D + D E ++ + L H
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNH 64
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAA 181
EN V+ G+ +G + L E+ S G L D + G+ P P QR + A
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM----PEPD---AQRFFHQLMA- 116
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 241
G+ YLH I HRDIK N+L+ + D KI+DF L+ ++ GT
Sbjct: 117 -GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLP 172
Query: 242 YHAPE 246
Y APE
Sbjct: 173 YVAPE 177
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 85/185 (45%), Gaps = 15/185 (8%)
Query: 65 ITENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQPD--EEFLAQVSMVSRLKH 121
E++ +GEG+YG V + + + A A+K +D + D E ++ + L H
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAA 181
EN V+ G+ +G + L E+ S G L D + G+ P P QR + A
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM----PEPD---AQRFFHQLMA- 115
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 241
G+ YLH I HRDIK N+L+ + D KI+DF L+ ++ GT
Sbjct: 116 -GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLP 171
Query: 242 YHAPE 246
Y APE
Sbjct: 172 YVAPE 176
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 85/185 (45%), Gaps = 15/185 (8%)
Query: 65 ITENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQPD--EEFLAQVSMVSRLKH 121
E++ +GEG+YG V + + + A A+K +D + D E ++ + L H
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNH 63
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAA 181
EN V+ G+ +G + L E+ S G L D + G+ P P QR + A
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM----PEPD---AQRFFHQLMA- 115
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 241
G+ YLH I HRDIK N+L+ + D KI+DF L+ ++ GT
Sbjct: 116 -GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLP 171
Query: 242 YHAPE 246
Y APE
Sbjct: 172 YVAPE 176
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 85/185 (45%), Gaps = 15/185 (8%)
Query: 65 ITENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQPD--EEFLAQVSMVSRLKH 121
E++ +GEG+YG V + + + A A+K +D + D E ++ + L H
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAA 181
EN V+ G+ +G + L E+ S G L D + G+ P P QR + A
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM----PEPD---AQRFFHQLMA- 115
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 241
G+ YLH I HRDIK N+L+ + D KI+DF L+ ++ GT
Sbjct: 116 -GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLP 171
Query: 242 YHAPE 246
Y APE
Sbjct: 172 YVAPE 176
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 79/185 (42%), Gaps = 21/185 (11%)
Query: 67 ENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQP----DEEFLAQVSMVSRLKH 121
E+F +G+G +G VY K S A+K L ++ + + +V + S L+H
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAA 181
N ++L GY D T L E+A G+++ L Q Q+ A
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYREL---------QKLSKFDEQRTATYITELA 118
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 241
L Y H K +IHRDIK N+L+ KIADF S AP T + GT
Sbjct: 119 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTELCGTLD 171
Query: 242 YHAPE 246
Y PE
Sbjct: 172 YLPPE 176
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 80/186 (43%), Gaps = 23/186 (12%)
Query: 67 ENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQP----DEEFLAQVSMVSRLKH 121
E+F +G+G +G VY K S A+K L ++ + + +V + S L+H
Sbjct: 34 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 93
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGA- 180
N ++L GY D T L E+A G+++ L +QR +
Sbjct: 94 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD----------EQRTATYITEL 143
Query: 181 AKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTF 240
A L Y H K +IHRDIK N+L+ KIADF S AP T + GT
Sbjct: 144 ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTL 196
Query: 241 GYHAPE 246
Y PE
Sbjct: 197 DYLPPE 202
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 88/183 (48%), Gaps = 18/183 (9%)
Query: 67 ENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQPDEEFLAQ--VSMVSRLKHEN 123
E F IG+GS+G V+ GI ++ AIK +D + DE Q ++++S+
Sbjct: 27 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 86
Query: 124 FVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKG 183
+ G + T + E+ GS D+L +PGP L Q I KG
Sbjct: 87 VTKYYGSYLKDTKLWIIMEYLGGGSALDLL---------EPGP-LDETQIATILREILKG 136
Query: 184 LEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYH 243
L+YLH + IHRDIK++NVL+ + K+ADF ++ Q D ++ +GT +
Sbjct: 137 LDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTD--TQIKRNTFVGTPFWM 191
Query: 244 APE 246
APE
Sbjct: 192 APE 194
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 88/183 (48%), Gaps = 18/183 (9%)
Query: 67 ENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQPDEEFLAQ--VSMVSRLKHEN 123
E F IG+GS+G V+ GI ++ AIK +D + DE Q ++++S+
Sbjct: 7 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 66
Query: 124 FVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKG 183
+ G + T + E+ GS D+L +PGP L Q I KG
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALDLL---------EPGP-LDETQIATILREILKG 116
Query: 184 LEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYH 243
L+YLH + IHRDIK++NVL+ + K+ADF ++ Q D ++ +GT +
Sbjct: 117 LDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTD--TQIKRNTFVGTPFWM 171
Query: 244 APE 246
APE
Sbjct: 172 APE 174
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 88/183 (48%), Gaps = 18/183 (9%)
Query: 67 ENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQPDEEFLAQ--VSMVSRLKHEN 123
E F IG+GS+G V+ GI ++ AIK +D + DE Q ++++S+
Sbjct: 7 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 66
Query: 124 FVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKG 183
+ G + T + E+ GS D+L +PGP L Q I KG
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALDLL---------EPGP-LDETQIATILREILKG 116
Query: 184 LEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYH 243
L+YLH + IHRDIK++NVL+ + K+ADF ++ Q D ++ +GT +
Sbjct: 117 LDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTD--TQIKRNXFVGTPFWM 171
Query: 244 APE 246
APE
Sbjct: 172 APE 174
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 79/185 (42%), Gaps = 21/185 (11%)
Query: 67 ENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQP----DEEFLAQVSMVSRLKH 121
E+F +G+G +G VY K S A+K L ++ + + +V + S L+H
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAA 181
N ++L GY D T L E+A G+++ L Q Q+ A
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYREL---------QKLSKFDEQRTATYITELA 118
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 241
L Y H K +IHRDIK N+L+ KIADF S AP T + GT
Sbjct: 119 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTLD 171
Query: 242 YHAPE 246
Y PE
Sbjct: 172 YLPPE 176
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 81/174 (46%), Gaps = 17/174 (9%)
Query: 68 NFGTNALIGEGSYGRVYYGILKSGH----AAAIKKLDA--SKQPDEEFLAQVSMVSRLKH 121
N + ++G G +G V G LK + AIK L +++ +FL + S++ + H
Sbjct: 17 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 76
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAA 181
N ++L G ++ E NGSL L AQ + Q V + G A
Sbjct: 77 PNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHD----AQFTVI----QLVGMLRGIA 128
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTR 235
G++YL +D +HRD+ + N+LI + V K++DF LS D ++TR
Sbjct: 129 SGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 179
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 88/183 (48%), Gaps = 18/183 (9%)
Query: 67 ENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQPDEEFLAQ--VSMVSRLKHEN 123
E F IG+GS+G V+ GI ++ AIK +D + DE Q ++++S+
Sbjct: 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 81
Query: 124 FVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKG 183
+ G + T + E+ GS D+L +PGP L Q I KG
Sbjct: 82 VTKYYGSYLKDTKLWIIMEYLGGGSALDLL---------EPGP-LDETQIATILREILKG 131
Query: 184 LEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYH 243
L+YLH + IHRDIK++NVL+ + K+ADF ++ Q D ++ +GT +
Sbjct: 132 LDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTD--TQIKRNXFVGTPFWM 186
Query: 244 APE 246
APE
Sbjct: 187 APE 189
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 79/185 (42%), Gaps = 21/185 (11%)
Query: 67 ENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQP----DEEFLAQVSMVSRLKH 121
E+F +G+G +G VY K S A+K L ++ + + +V + S L+H
Sbjct: 13 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 72
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAA 181
N ++L GY D T L E+A G+++ L Q Q+ A
Sbjct: 73 PNILRLYGYFHDATRVYLILEYAPLGTVYREL---------QKLSKFDEQRTATYITELA 123
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 241
L Y H K +IHRDIK N+L+ KIADF S AP T + GT
Sbjct: 124 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTLD 176
Query: 242 YHAPE 246
Y PE
Sbjct: 177 YLPPE 181
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 79/185 (42%), Gaps = 21/185 (11%)
Query: 67 ENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQP----DEEFLAQVSMVSRLKH 121
E+F +G+G +G VY K S A+K L ++ + + +V + S L+H
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAA 181
N ++L GY D T L E+A G+++ L Q Q+ A
Sbjct: 71 PNILRLYGYFHDATRVYLILEYAPLGTVYREL---------QKLSKFDEQRTATYITELA 121
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 241
L Y H K +IHRDIK N+L+ KIADF S AP T + GT
Sbjct: 122 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTLD 174
Query: 242 YHAPE 246
Y PE
Sbjct: 175 YLPPE 179
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 86/182 (47%), Gaps = 14/182 (7%)
Query: 75 IGEGSYGRVYYG----ILKSGHA---AAIKKLDASKQPDE--EFLAQVSMVSRLKHENFV 125
+G+GS+G VY G I+K G A A+K ++ S E EFL + S++ + V
Sbjct: 25 LGQGSFGMVYEGNARDIIK-GEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 126 QLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPG-PVLSWQQRVKIAVGAAKGL 184
+LLG G ++ E ++G L L + PG P + Q+ +++A A G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 185 EYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHA 244
YL+ K +HRD+ + N ++ D KI DF ++ + A + L + A
Sbjct: 144 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMA 200
Query: 245 PE 246
PE
Sbjct: 201 PE 202
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 79/185 (42%), Gaps = 21/185 (11%)
Query: 67 ENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQP----DEEFLAQVSMVSRLKH 121
E+F +G+G +G VY K S A+K L ++ + + +V + S L+H
Sbjct: 13 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 72
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAA 181
N ++L GY D T L E+A G+++ L Q Q+ A
Sbjct: 73 PNILRLYGYFHDATRVYLILEYAPLGTVYREL---------QKLSKFDEQRTATYITELA 123
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 241
L Y H K +IHRDIK N+L+ KIADF S AP T + GT
Sbjct: 124 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTLD 176
Query: 242 YHAPE 246
Y PE
Sbjct: 177 YLPPE 181
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 89/183 (48%), Gaps = 15/183 (8%)
Query: 49 VQPIEVPAISVDELKEITENFGTNALIGEGSYGRVY----YGILKSGHA--AAIKKLDAS 102
+ P ++P E FG +G G++G+V +G+ K A+K L ++
Sbjct: 22 IDPTQLPYNEKWEFPRNNLQFGKT--LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKST 79
Query: 103 KQPDEE--FLAQVSMVSRL-KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGV 159
DE+ ++++ ++S L +HEN V LLG C G ++ E+ G L + L +
Sbjct: 80 AHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEA 139
Query: 160 K-GAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADF 218
+ G L + + + A+G+ +L K + IHRD+ + NVL+ + VAKI DF
Sbjct: 140 DLDKEDGRPLELRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDF 196
Query: 219 DLS 221
L+
Sbjct: 197 GLA 199
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 79/185 (42%), Gaps = 21/185 (11%)
Query: 67 ENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQP----DEEFLAQVSMVSRLKH 121
E+F +G+G +G VY K S A+K L ++ + + +V + S L+H
Sbjct: 12 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 71
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAA 181
N ++L GY D T L E+A G+++ L Q Q+ A
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYREL---------QKLSKFDEQRTATYITELA 122
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 241
L Y H K +IHRDIK N+L+ KIADF S AP T + GT
Sbjct: 123 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTLD 175
Query: 242 YHAPE 246
Y PE
Sbjct: 176 YLPPE 180
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 79/185 (42%), Gaps = 21/185 (11%)
Query: 67 ENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQP----DEEFLAQVSMVSRLKH 121
E+F +G+G +G VY K S A+K L ++ + + +V + S L+H
Sbjct: 25 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 84
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAA 181
N ++L GY D T L E+A G+++ L Q Q+ A
Sbjct: 85 PNILRLYGYFHDATRVYLILEYAPLGTVYREL---------QKLSKFDEQRTATYITELA 135
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 241
L Y H K +IHRDIK N+L+ KIADF S AP T + GT
Sbjct: 136 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTLD 188
Query: 242 YHAPE 246
Y PE
Sbjct: 189 YLPPE 193
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 90/183 (49%), Gaps = 15/183 (8%)
Query: 49 VQPIEVPAISVDELKEITENFGTNALIGEGSYGRVY----YGILKSGHA--AAIKKLDAS 102
+ P ++P E FG +G G++G+V +G+ K A+K L ++
Sbjct: 30 IDPTQLPYNEKWEFPRNNLQFGKT--LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKST 87
Query: 103 KQPDEE--FLAQVSMVSRL-KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGR-KG 158
DE+ ++++ ++S L +HEN V LLG C G ++ E+ G L + L + +
Sbjct: 88 AHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEA 147
Query: 159 VKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADF 218
+ G L + + + A+G+ +L A + IHRD+ + NVL+ + VAKI DF
Sbjct: 148 DLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDF 204
Query: 219 DLS 221
L+
Sbjct: 205 GLA 207
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 79/185 (42%), Gaps = 21/185 (11%)
Query: 67 ENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQP----DEEFLAQVSMVSRLKH 121
E+F +G+G +G VY K S A+K L ++ + + +V + S L+H
Sbjct: 7 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 66
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAA 181
N ++L GY D T L E+A G+++ + Q Q+ A
Sbjct: 67 PNILRLYGYFHDATRVYLILEYAPLGTVY---------RELQKLSKFDEQRTATYITELA 117
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 241
L Y H K +IHRDIK N+L+ KIADF S AP T + GT
Sbjct: 118 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTLD 170
Query: 242 YHAPE 246
Y PE
Sbjct: 171 YLPPE 175
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 79/185 (42%), Gaps = 21/185 (11%)
Query: 67 ENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQP----DEEFLAQVSMVSRLKH 121
E+F +G+G +G VY K S A+K L ++ + + +V + S L+H
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAA 181
N ++L GY D T L E+A G+++ + Q Q+ A
Sbjct: 71 PNILRLYGYFHDATRVYLILEYAPLGTVY---------RELQKLSKFDEQRTATYITELA 121
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 241
L Y H K +IHRDIK N+L+ KIADF S AP T + GT
Sbjct: 122 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTLD 174
Query: 242 YHAPE 246
Y PE
Sbjct: 175 YLPPE 179
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 79/185 (42%), Gaps = 21/185 (11%)
Query: 67 ENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQP----DEEFLAQVSMVSRLKH 121
E+F +G+G +G VY K S A+K L ++ + + +V + S L+H
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAA 181
N ++L GY D T L E+A G+++ L Q Q+ A
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYREL---------QKLSKFDEQRTATYITELA 118
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 241
L Y H K +IHRDIK N+L+ KIADF S AP T + GT
Sbjct: 119 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTXLCGTLD 171
Query: 242 YHAPE 246
Y PE
Sbjct: 172 YLPPE 176
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 79/185 (42%), Gaps = 21/185 (11%)
Query: 67 ENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQP----DEEFLAQVSMVSRLKH 121
E+F +G+G +G VY K S A+K L ++ + + +V + S L+H
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAA 181
N ++L GY D T L E+A G+++ L Q Q+ A
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYREL---------QKLSKFDEQRTATYITELA 118
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 241
L Y H K +IHRDIK N+L+ KIADF S AP T + GT
Sbjct: 119 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTDLCGTLD 171
Query: 242 YHAPE 246
Y PE
Sbjct: 172 YLPPE 176
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 79/185 (42%), Gaps = 21/185 (11%)
Query: 67 ENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQP----DEEFLAQVSMVSRLKH 121
E+F +G+G +G VY K S A+K L ++ + + +V + S L+H
Sbjct: 13 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 72
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAA 181
N ++L GY D T L E+A G+++ L Q Q+ A
Sbjct: 73 PNILRLYGYFHDATRVYLILEYAPLGTVYREL---------QKLSKFDEQRTATYITELA 123
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 241
L Y H K +IHRDIK N+L+ KIADF S AP T + GT
Sbjct: 124 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTDLCGTLD 176
Query: 242 YHAPE 246
Y PE
Sbjct: 177 YLPPE 181
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 79/185 (42%), Gaps = 21/185 (11%)
Query: 67 ENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQP----DEEFLAQVSMVSRLKH 121
E+F +G+G +G VY K S A+K L ++ + + +V + S L+H
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAA 181
N ++L GY D T L E+A G+++ L Q Q+ A
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYREL---------QKLSKFDEQRTATYITELA 118
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 241
L Y H K +IHRDIK N+L+ KIADF S AP T + GT
Sbjct: 119 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTDLCGTLD 171
Query: 242 YHAPE 246
Y PE
Sbjct: 172 YLPPE 176
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 79/185 (42%), Gaps = 21/185 (11%)
Query: 67 ENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQP----DEEFLAQVSMVSRLKH 121
E+F +G+G +G VY K S A+K L ++ + + +V + S L+H
Sbjct: 9 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 68
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAA 181
N ++L GY D T L E+A G+++ L Q Q+ A
Sbjct: 69 PNILRLYGYFHDATRVYLILEYAPLGTVYREL---------QKLSKFDEQRTATYITELA 119
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 241
L Y H K +IHRDIK N+L+ KIADF S AP T + GT
Sbjct: 120 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTDLCGTLD 172
Query: 242 YHAPE 246
Y PE
Sbjct: 173 YLPPE 177
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 83/175 (47%), Gaps = 19/175 (10%)
Query: 75 IGEGSYGRVYYGILK-SGHAAAIKKLDASKQPDEEFL-AQVSMVSRLKHENFVQLLGYCV 132
IGEGS G V K SG A+K +D KQ E L +V ++ +H N V++ +
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYL 112
Query: 133 DGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKAD 192
G + EF G+L DI+ + L+ +Q + + L YLH +
Sbjct: 113 VGEELWVLMEFLQGGALTDIVSQVR----------LNEEQIATVCEAVLQALAYLHAQG- 161
Query: 193 PHIIHRDIKSSNVLIFDDDVAKIADFDLSNQ-APDMAARLHSTRVLGTFGYHAPE 246
+IHRDIKS ++L+ D K++DF Q + D+ R ++GT + APE
Sbjct: 162 --VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKR---KXLVGTPYWMAPE 211
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 77/168 (45%), Gaps = 17/168 (10%)
Query: 74 LIGEGSYGRVYYGILK----SGHAAAIKKLDA--SKQPDEEFLAQVSMVSRLKHENFVQL 127
+IG G +G V G LK AIK L +++ +FL + S++ + H N + L
Sbjct: 29 VIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHL 88
Query: 128 LGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYL 187
G ++ E+ NGSL L G + Q V + G + G++YL
Sbjct: 89 EGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQ--------FTVIQLVGMLRGISAGMKYL 140
Query: 188 HEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTR 235
+D +HRD+ + N+LI + V K++DF LS D ++TR
Sbjct: 141 ---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 185
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 85/182 (46%), Gaps = 14/182 (7%)
Query: 75 IGEGSYGRVYYG----ILKSGHA---AAIKKLDASKQPDE--EFLAQVSMVSRLKHENFV 125
+G+GS+G VY G I+K G A A+K ++ S E EFL + S++ + V
Sbjct: 25 LGQGSFGMVYEGNARDIIK-GEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 126 QLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPG-PVLSWQQRVKIAVGAAKGL 184
+LLG G ++ E ++G L L + PG P + Q+ +++A A G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 185 EYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHA 244
YL+ K +HRD+ + N ++ D KI DF ++ + + L + A
Sbjct: 144 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMA 200
Query: 245 PE 246
PE
Sbjct: 201 PE 202
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 79/185 (42%), Gaps = 21/185 (11%)
Query: 67 ENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQP----DEEFLAQVSMVSRLKH 121
E+F +G+G +G VY K S A+K L ++ + + +V + S L+H
Sbjct: 9 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 68
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAA 181
N ++L GY D T L E+A G+++ L Q Q+ A
Sbjct: 69 PNILRLYGYFHDATRVYLILEYAPLGTVYREL---------QKLSKFDEQRTATYITELA 119
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 241
L Y H K +IHRDIK N+L+ KIADF S AP T + GT
Sbjct: 120 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSCHAPSS----RRTTLSGTLD 172
Query: 242 YHAPE 246
Y PE
Sbjct: 173 YLPPE 177
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 85/182 (46%), Gaps = 14/182 (7%)
Query: 75 IGEGSYGRVYYG----ILKSGHA---AAIKKLDASKQPDE--EFLAQVSMVSRLKHENFV 125
+G+GS+G VY G I+K G A A+K ++ S E EFL + S++ + V
Sbjct: 25 LGQGSFGMVYEGNARDIIK-GEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 126 QLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPG-PVLSWQQRVKIAVGAAKGL 184
+LLG G ++ E ++G L L + PG P + Q+ +++A A G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 185 EYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHA 244
YL+ K +HRD+ + N ++ D KI DF ++ + + L + A
Sbjct: 144 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMA 200
Query: 245 PE 246
PE
Sbjct: 201 PE 202
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 85/182 (46%), Gaps = 14/182 (7%)
Query: 75 IGEGSYGRVYYG----ILKSGHA---AAIKKLDASKQPDE--EFLAQVSMVSRLKHENFV 125
+G+GS+G VY G I+K G A A+K ++ S E EFL + S++ + V
Sbjct: 22 LGQGSFGMVYEGNARDIIK-GEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 80
Query: 126 QLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPG-PVLSWQQRVKIAVGAAKGL 184
+LLG G ++ E ++G L L + PG P + Q+ +++A A G+
Sbjct: 81 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 140
Query: 185 EYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHA 244
YL+ K +HRD+ + N ++ D KI DF ++ + + L + A
Sbjct: 141 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMA 197
Query: 245 PE 246
PE
Sbjct: 198 PE 199
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 77/185 (41%), Gaps = 21/185 (11%)
Query: 67 ENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQP----DEEFLAQVSMVSRLKH 121
E+F +G+G +G VY K S A+K L ++ + + +V + S L+H
Sbjct: 13 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 72
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAA 181
N ++L GY D T L E+A G ++ K Q Q+ A
Sbjct: 73 PNILRLYGYFHDATRVYLILEYAPRGEVY---------KELQKLSKFDEQRTATYITELA 123
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 241
L Y H K +IHRDIK N+L+ KIADF S AP + GT
Sbjct: 124 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRXXLXGTLD 176
Query: 242 YHAPE 246
Y PE
Sbjct: 177 YLPPE 181
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 79/161 (49%), Gaps = 22/161 (13%)
Query: 75 IGEGSYGRVYYGILK-----SGHAAAIKKL--DASKQPDEEFLAQVSMVSRLKHENFVQL 127
+GEG +G+V +G A+K L DA Q + ++ ++ L HE+ ++
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 128 LGYCVDG--TSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLE 185
G C D S L E+ GSL D L R + AQ +L + Q++ +G+
Sbjct: 99 KGCCEDAGAASLQLVMEYVPLGSLRDYL-PRHSIGLAQ---LLLFAQQI------CEGMA 148
Query: 186 YLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
YLH + H IHRD+ + NVL+ +D + KI DF L+ P+
Sbjct: 149 YLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPE 186
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 78/157 (49%), Gaps = 14/157 (8%)
Query: 75 IGEGSYGRVYYG----ILKSGHA---AAIKKLDASKQPDE--EFLAQVSMVSRLKHENFV 125
+G+GS+G VY G I+K G A A+K ++ S E EFL + S++ + V
Sbjct: 24 LGQGSFGMVYEGNARDIIK-GEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 82
Query: 126 QLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPG-PVLSWQQRVKIAVGAAKGL 184
+LLG G ++ E ++G L L + PG P + Q+ +++A A G+
Sbjct: 83 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 142
Query: 185 EYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 221
YL+ K +HRD+ + N ++ D KI DF ++
Sbjct: 143 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMT 176
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 86/183 (46%), Gaps = 18/183 (9%)
Query: 67 ENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQPDEEFLAQ--VSMVSRLKHEN 123
E F IG+GS+G VY GI + AIK +D + DE Q ++++S+
Sbjct: 19 ELFTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 78
Query: 124 FVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKG 183
+ G + T + E+ GS D+L +PGP L I KG
Sbjct: 79 ITRYFGSYLKSTKLWIIMEYLGGGSALDLL---------KPGP-LEETYIATILREILKG 128
Query: 184 LEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYH 243
L+YLH + IHRDIK++NVL+ + K+ADF ++ Q D ++ +GT +
Sbjct: 129 LDYLHSERK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTD--TQIKRNXFVGTPFWM 183
Query: 244 APE 246
APE
Sbjct: 184 APE 186
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 67/152 (44%), Gaps = 11/152 (7%)
Query: 75 IGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDG 134
+G G +G V G K + A+K + ++EF + + +L H V+ G C
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKE 75
Query: 135 TSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPH 194
+ E+ SNG L + L R KG +P Q +++ +G+ +L
Sbjct: 76 YPIYIVTEYISNGCLLNYL--RSHGKGLEPS------QLLEMCYDVCEGMAFLESH---Q 124
Query: 195 IIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
IHRD+ + N L+ D K++DF ++ D
Sbjct: 125 FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLD 156
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 95/198 (47%), Gaps = 19/198 (9%)
Query: 52 IEVPAISVDELKEITENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQPDEEFL 110
++VP + + + + E F IG+GS+G V+ GI ++ AIK +D + DE
Sbjct: 9 VQVPGMQ-NNIADPEELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIED 67
Query: 111 AQ--VSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVL 168
Q ++++S+ + G + G+ + E+ GS D+L GP
Sbjct: 68 IQQEITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRA---------GPFD 118
Query: 169 SWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMA 228
+Q + KGL+YLH + IHRDIK++NVL+ + K+ADF ++ Q D
Sbjct: 119 EFQIATMLK-EILKGLDYLHSEKK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTD-- 172
Query: 229 ARLHSTRVLGTFGYHAPE 246
++ +GT + APE
Sbjct: 173 TQIKRNTFVGTPFWMAPE 190
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 83/185 (44%), Gaps = 21/185 (11%)
Query: 67 ENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQP----DEEFLAQVSMVSRLKH 121
E+F +G+G +G VY + S A+K L ++ + + +V + S L+H
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAA 181
N ++L GY D T L E+A G+++ + Q Q+ A
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVY---------RELQKLSRFDEQRTATYITELA 122
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 241
L Y H K +IHRDIK N+L+ + KIADF S AP ++R + + GT
Sbjct: 123 NALSYCHSK---RVIHRDIKPENLLLGSNGELKIADFGWSVHAP--SSRRDT--LCGTLD 175
Query: 242 YHAPE 246
Y PE
Sbjct: 176 YLPPE 180
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 78/157 (49%), Gaps = 14/157 (8%)
Query: 75 IGEGSYGRVYYG----ILKSGHA---AAIKKLDASKQPDE--EFLAQVSMVSRLKHENFV 125
+G+GS+G VY G I+K G A A+K ++ S E EFL + S++ + V
Sbjct: 25 LGQGSFGMVYEGNARDIIK-GEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 126 QLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPG-PVLSWQQRVKIAVGAAKGL 184
+LLG G ++ E ++G L L + PG P + Q+ +++A A G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 185 EYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 221
YL+ K +HRD+ + N ++ D KI DF ++
Sbjct: 144 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMT 177
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 79/185 (42%), Gaps = 21/185 (11%)
Query: 67 ENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQP----DEEFLAQVSMVSRLKH 121
E+F +G+G +G VY K S A+K L ++ + + +V + S L+H
Sbjct: 10 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 69
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAA 181
N ++L GY D T L E+A G+++ L Q Q+ A
Sbjct: 70 PNILRLYGYFHDATRVYLILEYAPLGTVYREL---------QKLSKFDEQRTATYITELA 120
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 241
L Y H K +IHRDIK N+L+ KIA+F S AP T + GT
Sbjct: 121 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIANFGWSVHAPSS----RRTTLCGTLD 173
Query: 242 YHAPE 246
Y PE
Sbjct: 174 YLPPE 178
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 76/189 (40%), Gaps = 29/189 (15%)
Query: 67 ENFGTNALIGEGSYGRVYYG---------ILKSGHAAAIKKLDASKQPDEEFLAQVSMVS 117
E+F +G+G +G VY LK A ++K Q E V + S
Sbjct: 5 EDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRRE----VEIQS 60
Query: 118 RLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIA 177
L+H N ++L GY D T L E+A G+++ + Q Q+
Sbjct: 61 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVY---------RELQKLSKFDEQRTATYI 111
Query: 178 VGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVL 237
A L Y H K +IHRDIK N+L+ KIADF S AP T +
Sbjct: 112 TELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLC 164
Query: 238 GTFGYHAPE 246
GT Y PE
Sbjct: 165 GTLDYLPPE 173
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 88/187 (47%), Gaps = 17/187 (9%)
Query: 64 EITENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKL-DASKQPDEEFLAQVSMVSRLKH 121
E EN G ++G+G+YG VY G L + AIK++ + + + ++++ LKH
Sbjct: 20 EYDEN-GDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKH 78
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAA 181
+N VQ LG + + E GSL +L + G P+ +Q +
Sbjct: 79 KNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWG-------PLKDNEQTIGFYTKQI 131
Query: 182 -KGLEYLHEKADPHIIHRDIKSSNVLIFD-DDVAKIADFDLSNQAPDMAARLHSTRVLGT 239
+GL+YLH D I+HRDIK NVLI V KI+DF S + + + GT
Sbjct: 132 LEGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTET--FTGT 186
Query: 240 FGYHAPE 246
Y APE
Sbjct: 187 LQYMAPE 193
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 92/203 (45%), Gaps = 28/203 (13%)
Query: 42 KGAQAVKVQPIEVPAISVDELKEITENFGTNALIGEGSYGRVY----YGILKSGHA--AA 95
+G + P ++P E FG +G G++G+V +G+ K A
Sbjct: 8 EGNSYTFIDPTQLPYNEKWEFPRNNLQFGKT--LGAGAFGKVVEATAFGLGKEDAVLKVA 65
Query: 96 IKKLDASKQPDEE--FLAQVSMVSRL-KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDI 152
+K L ++ DE+ ++++ ++S L +HEN V LLG C G ++ E+ G L +
Sbjct: 66 VKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNF 125
Query: 153 LH-------GRKGVKGAQP-------GPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHR 198
L G G P G L + + + A+G+ +L K + IHR
Sbjct: 126 LRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASK---NCIHR 182
Query: 199 DIKSSNVLIFDDDVAKIADFDLS 221
D+ + NVL+ + VAKI DF L+
Sbjct: 183 DVAARNVLLTNGHVAKIGDFGLA 205
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 77/168 (45%), Gaps = 17/168 (10%)
Query: 74 LIGEGSYGRVYYGILK----SGHAAAIKKLDA--SKQPDEEFLAQVSMVSRLKHENFVQL 127
+IG G +G V G LK AIK L A + + +FL++ S++ + H N + L
Sbjct: 15 VIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHL 74
Query: 128 LGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYL 187
G ++ E+ NGSL L G + Q V + G G++YL
Sbjct: 75 EGVVTKCKPVMIITEYMENGSLDAFLRKNDGR--------FTVIQLVGMLRGIGSGMKYL 126
Query: 188 HEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTR 235
+D +HRD+ + N+L+ + V K++DF +S D ++TR
Sbjct: 127 ---SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTR 171
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 79/185 (42%), Gaps = 21/185 (11%)
Query: 67 ENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQP----DEEFLAQVSMVSRLKH 121
E+F +G+G +G VY K S A+K L ++ + + +V + S L+H
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAA 181
N ++L GY D T L E+A G+++ L Q Q+ A
Sbjct: 71 PNILRLYGYFHDATRVYLILEYAPLGTVYREL---------QKLSKFDEQRTATYITELA 121
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 241
L Y H K +IHRDIK N+L+ KIA+F S AP T + GT
Sbjct: 122 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIANFGWSVHAPSS----RRTTLCGTLD 174
Query: 242 YHAPE 246
Y PE
Sbjct: 175 YLPPE 179
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 77/168 (45%), Gaps = 17/168 (10%)
Query: 74 LIGEGSYGRVYYGILK----SGHAAAIKKLDA--SKQPDEEFLAQVSMVSRLKHENFVQL 127
+IG G +G V G LK AIK L A + + +FL++ S++ + H N + L
Sbjct: 21 VIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHL 80
Query: 128 LGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYL 187
G ++ E+ NGSL L G + Q V + G G++YL
Sbjct: 81 EGVVTKCKPVMIITEYMENGSLDAFLRKNDGR--------FTVIQLVGMLRGIGSGMKYL 132
Query: 188 HEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTR 235
+D +HRD+ + N+L+ + V K++DF +S D ++TR
Sbjct: 133 ---SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTR 177
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 77/168 (45%), Gaps = 17/168 (10%)
Query: 74 LIGEGSYGRVYYGILK----SGHAAAIKKLDA--SKQPDEEFLAQVSMVSRLKHENFVQL 127
+IG G +G V G LK AIK L A + + +FL++ S++ + H N + L
Sbjct: 36 VIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHL 95
Query: 128 LGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYL 187
G ++ E+ NGSL L G + Q V + G G++YL
Sbjct: 96 EGVVTKCKPVMIITEYMENGSLDAFLRKNDGR--------FTVIQLVGMLRGIGSGMKYL 147
Query: 188 HEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTR 235
+D +HRD+ + N+L+ + V K++DF +S D ++TR
Sbjct: 148 ---SDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTR 192
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 88/190 (46%), Gaps = 23/190 (12%)
Query: 64 EITENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDAS----KQPDEEFLAQVSMVSR 118
E EN G ++G+G+YG VY G L + AIK++ QP E ++++
Sbjct: 6 EYDEN-GDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHE---EIALHKH 61
Query: 119 LKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAV 178
LKH+N VQ LG + + E GSL +L + G P+ +Q +
Sbjct: 62 LKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWG-------PLKDNEQTIGFYT 114
Query: 179 GAA-KGLEYLHEKADPHIIHRDIKSSNVLIFD-DDVAKIADFDLSNQAPDMAARLHSTRV 236
+GL+YLH D I+HRDIK NVLI V KI+DF S + + +
Sbjct: 115 KQILEGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTET--F 169
Query: 237 LGTFGYHAPE 246
GT Y APE
Sbjct: 170 TGTLQYMAPE 179
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 78/185 (42%), Gaps = 21/185 (11%)
Query: 67 ENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQP----DEEFLAQVSMVSRLKH 121
E+F +G+G +G VY K S A+K L ++ + + +V + S L+H
Sbjct: 10 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 69
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAA 181
N ++L GY D T L E+A G+++ L Q Q+ A
Sbjct: 70 PNILRLYGYFHDATRVYLILEYAPLGTVYREL---------QKLSKFDEQRTATYITELA 120
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 241
L Y H K +IHRDIK N+L+ KIADF S AP + GT
Sbjct: 121 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRXXLCGTLD 173
Query: 242 YHAPE 246
Y PE
Sbjct: 174 YLPPE 178
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 78/185 (42%), Gaps = 21/185 (11%)
Query: 67 ENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQP----DEEFLAQVSMVSRLKH 121
E+F +G+G +G VY K S A+K L ++ + + +V + S L+H
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAA 181
N ++L GY D T L E+A G+++ + Q Q+ A
Sbjct: 71 PNILRLYGYFHDATRVYLILEYAPLGTVY---------RELQKLSKFDEQRTATYITELA 121
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 241
L Y H K +IHRDIK N+L+ KIADF S AP + GT
Sbjct: 122 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRXXLCGTLD 174
Query: 242 YHAPE 246
Y PE
Sbjct: 175 YLPPE 179
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 78/185 (42%), Gaps = 21/185 (11%)
Query: 67 ENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQP----DEEFLAQVSMVSRLKH 121
E+F +G+G +G VY K S A+K L ++ + + +V + S L+H
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAA 181
N ++L GY D T L E+A G+++ L Q Q+ A
Sbjct: 71 PNILRLYGYFHDATRVYLILEYAPLGTVYREL---------QKLSKFDEQRTATYITELA 121
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 241
L Y H K +IHRDIK N+L+ KIADF S AP + GT
Sbjct: 122 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRAALCGTLD 174
Query: 242 YHAPE 246
Y PE
Sbjct: 175 YLPPE 179
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 78/185 (42%), Gaps = 21/185 (11%)
Query: 67 ENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQP----DEEFLAQVSMVSRLKH 121
E+F +G+G +G VY K S A+K L ++ + + +V + S L+H
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAA 181
N ++L GY D T L E+A G+++ L Q Q+ A
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYREL---------QKLSKFDEQRTATYITELA 118
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 241
L Y H K +IHRDIK N+L+ KIADF S AP + GT
Sbjct: 119 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRXXLCGTLD 171
Query: 242 YHAPE 246
Y PE
Sbjct: 172 YLPPE 176
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 82/185 (44%), Gaps = 21/185 (11%)
Query: 67 ENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQP----DEEFLAQVSMVSRLKH 121
E+F +G+G +G VY K S A+K L ++ + + +V + S L+H
Sbjct: 9 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 68
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAA 181
N ++L GY D T L E+A G+++ L Q Q+ A
Sbjct: 69 PNILRLYGYFHDATRVYLILEYAPLGTVYREL---------QKLSKFDEQRTATYITELA 119
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 241
L Y H K +IHRDIK N+L+ KIADF S AP ++R + + GT
Sbjct: 120 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP--SSRRDT--LCGTLD 172
Query: 242 YHAPE 246
Y PE
Sbjct: 173 YLPPE 177
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 89/179 (49%), Gaps = 22/179 (12%)
Query: 75 IGEGSYGR-VYYGILKSGHAAAIKKLDASK---QPDEEFLAQVSMVSRLKHENFVQLLGY 130
IGEGS+G+ + + G IK+++ S+ + EE +V++++ +KH N VQ
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRES 91
Query: 131 CVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEK 190
+ S + ++ G L ++ +KGV Q +L W ++ +A L+++H
Sbjct: 92 FEENGSLYIVMDYCEGGDLFKRINAQKGVL-FQEDQILDWFVQICLA------LKHVH-- 142
Query: 191 ADPHIIHRDIKSSNVLIFDDDVAKIADFDLS---NQAPDMAARLHSTRVLGTFGYHAPE 246
D I+HRDIKS N+ + D ++ DF ++ N ++A +GT Y +PE
Sbjct: 143 -DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELA-----RACIGTPYYLSPE 195
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 85/184 (46%), Gaps = 17/184 (9%)
Query: 67 ENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQPD---EEFLAQVSMVSRLKHE 122
ENF IGEG+YG VY K +G A+KK+ + + + ++S++ L H
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 123 NFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAK 182
N V+LL L +EF S L D + + G P P++ +
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDA-SALTGI-PLPLIK-----SYLFQLLQ 116
Query: 183 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 242
GL + H ++HRD+K N+LI + K+ADF L+ +A + R + V+ T Y
Sbjct: 117 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVV-TLWY 171
Query: 243 HAPE 246
APE
Sbjct: 172 RAPE 175
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 82/189 (43%), Gaps = 29/189 (15%)
Query: 67 ENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQP----DEEFLAQVSMVSRLKH 121
E+F +G+G +G VY K S A+K L ++ + + +V + S L+H
Sbjct: 34 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 93
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGA- 180
N ++L GY D T L E+A G+++ L +QR +
Sbjct: 94 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD----------EQRTATYITEL 143
Query: 181 AKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTR---VL 237
A L Y H K +IHRDIK N+L+ KIADF S AP S+R +
Sbjct: 144 ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP-------SSRRDDLC 193
Query: 238 GTFGYHAPE 246
GT Y PE
Sbjct: 194 GTLDYLPPE 202
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 85/184 (46%), Gaps = 17/184 (9%)
Query: 67 ENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQPD---EEFLAQVSMVSRLKHE 122
ENF IGEG+YG VY K +G A+KK+ + + + ++S++ L H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 123 NFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAK 182
N V+LL L +EF S L D + + G P P++ +
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDA-SALTGI-PLPLIK-----SYLFQLLQ 117
Query: 183 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 242
GL + H ++HRD+K N+LI + K+ADF L+ +A + R + V+ T Y
Sbjct: 118 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVV-TLWY 172
Query: 243 HAPE 246
APE
Sbjct: 173 RAPE 176
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 79/173 (45%), Gaps = 16/173 (9%)
Query: 60 DELKEITENFGTNALIGEGSYGRVYYGILK------SGHAAAIKKLD--ASKQPDEEFLA 111
DE + E + +G+GS+G VY G+ K AIK ++ AS + EFL
Sbjct: 18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 77
Query: 112 QVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQP---GPVL 168
+ S++ + V+LLG G ++ E + G L L + P P L
Sbjct: 78 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSL 137
Query: 169 SWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 221
S + +++A A G+ YL+ +HRD+ + N ++ +D KI DF ++
Sbjct: 138 S--KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMT 185
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 78/185 (42%), Gaps = 21/185 (11%)
Query: 67 ENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQP----DEEFLAQVSMVSRLKH 121
E+F +G+G +G VY K S A+K L ++ + + +V + S L+H
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAA 181
N ++L GY D T L E+A G+++ L Q Q+ A
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYREL---------QKLSKFDEQRTATYITELA 118
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 241
L Y H K +IHRDIK N+L+ KIADF S AP + GT
Sbjct: 119 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRAALCGTLD 171
Query: 242 YHAPE 246
Y PE
Sbjct: 172 YLPPE 176
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 81/188 (43%), Gaps = 27/188 (14%)
Query: 67 ENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQP----DEEFLAQVSMVSRLKH 121
E+F +G+G +G VY K S A+K L ++ + + +V + S L+H
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAA 181
N ++L GY D T L E+A G+++ + Q Q+ A
Sbjct: 71 PNILRLYGYFHDATRVYLILEYAPLGTVY---------RELQKLSKFDEQRTATYITELA 121
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTR---VLG 238
L Y H K +IHRDIK N+L+ KIADF S AP S+R + G
Sbjct: 122 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP-------SSRRDDLCG 171
Query: 239 TFGYHAPE 246
T Y PE
Sbjct: 172 TLDYLPPE 179
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 84/185 (45%), Gaps = 15/185 (8%)
Query: 65 ITENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQPD--EEFLAQVSMVSRLKH 121
E++ +GEG+ G V + + + A A+K +D + D E ++ + L H
Sbjct: 4 FVEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAA 181
EN V+ G+ +G + L E+ S G L D + G+ P P QR + A
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM----PEPD---AQRFFHQLMA- 115
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 241
G+ YLH I HRDIK N+L+ + D KI+DF L+ ++ GT
Sbjct: 116 -GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 171
Query: 242 YHAPE 246
Y APE
Sbjct: 172 YVAPE 176
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 84/189 (44%), Gaps = 21/189 (11%)
Query: 64 EITENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQPD---EEFLAQVSMVSRL 119
E ENF IGEG+YG VY K +G A+KK+ + + + ++S++ L
Sbjct: 7 EFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 66
Query: 120 KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQ--PGPVLSWQQRVKIA 177
H N V+LL L +EF LH L P P++
Sbjct: 67 NHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK-----SYL 116
Query: 178 VGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVL 237
+GL + H ++HRD+K N+LI + K+ADF L+ +A + R ++ V+
Sbjct: 117 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEVV 172
Query: 238 GTFGYHAPE 246
T Y APE
Sbjct: 173 -TLWYRAPE 180
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 79/173 (45%), Gaps = 16/173 (9%)
Query: 60 DELKEITENFGTNALIGEGSYGRVYYGILK------SGHAAAIKKLD--ASKQPDEEFLA 111
DE + E + +G+GS+G VY G+ K AIK ++ AS + EFL
Sbjct: 8 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 67
Query: 112 QVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQP---GPVL 168
+ S++ + V+LLG G ++ E + G L L + P P L
Sbjct: 68 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSL 127
Query: 169 SWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 221
S + +++A A G+ YL+ +HRD+ + N ++ +D KI DF ++
Sbjct: 128 S--KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMT 175
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 90/186 (48%), Gaps = 25/186 (13%)
Query: 67 ENFGTNALIGEGSYGRVY-YGILKSGHAAAIKKLDAS--KQPDEEFLAQVSMVSRLKHEN 123
EN G +G G+ G+V+ K+GH A+K++ S K+ ++ L + +V LK +
Sbjct: 28 ENLGE---MGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVV--LKSHD 82
Query: 124 ---FVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGA 180
VQ G + T +A E G+ + L +K ++G P +L K+ V
Sbjct: 83 CPYIVQCFGTFITNTDVFIAMELM--GTCAEKL--KKRMQGPIPERILG-----KMTVAI 133
Query: 181 AKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTF 240
K L YL EK +IHRD+K SN+L+ + K+ DF +S + D A+ R G
Sbjct: 134 VKALYYLKEKHG--VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAK---DRSAGCA 188
Query: 241 GYHAPE 246
Y APE
Sbjct: 189 AYMAPE 194
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 81/162 (50%), Gaps = 20/162 (12%)
Query: 68 NFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASK-QPD--EEFLAQVSMVSRLKHEN 123
N+ IG+G++ +V + +G A+K +D ++ P ++ +V ++ L H N
Sbjct: 16 NYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75
Query: 124 FVQLLGYCVDGTSRVLAYEFASNGSLHDIL--HGRKGVKGAQPGPVLSWQQRVKIAVGAA 181
V+L + L E+AS G + D L HGR K A+ ++Q V
Sbjct: 76 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA----KFRQIVS------ 125
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQ 223
++Y H+K +I+HRD+K+ N+L+ D KIADF SN+
Sbjct: 126 -AVQYCHQK---YIVHRDLKAENLLLDGDMNIKIADFGFSNE 163
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 84/189 (44%), Gaps = 21/189 (11%)
Query: 64 EITENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQPD---EEFLAQVSMVSRL 119
E ENF IGEG+YG VY K +G A+KK+ + + + ++S++ L
Sbjct: 7 EFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 66
Query: 120 KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQ--PGPVLSWQQRVKIA 177
H N V+LL L +EF LH L P P++
Sbjct: 67 NHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK-----SYL 116
Query: 178 VGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVL 237
+GL + H ++HRD+K N+LI + K+ADF L+ +A + R ++ V+
Sbjct: 117 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEVV 172
Query: 238 GTFGYHAPE 246
T Y APE
Sbjct: 173 -TLWYRAPE 180
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 78/185 (42%), Gaps = 21/185 (11%)
Query: 67 ENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQP----DEEFLAQVSMVSRLKH 121
E+F +G+G +G VY K S A+K L ++ + + +V + S L+H
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAA 181
N ++L GY D T L E+A G+++ + Q Q+ A
Sbjct: 68 PNILRLYGYFHDSTRVYLILEYAPLGTVY---------RELQKLSKFDEQRTATYITELA 118
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 241
L Y H K +IHRDIK N+L+ KIADF S AP + GT
Sbjct: 119 NALSYCHSKK---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRAALCGTLD 171
Query: 242 YHAPE 246
Y PE
Sbjct: 172 YLPPE 176
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 86/197 (43%), Gaps = 35/197 (17%)
Query: 68 NFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQ 126
+F LIG G +G+V+ + G IK++ + + E +V +++L H N V
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAER---EVKALAKLDHVNIVH 68
Query: 127 LLGYCVDG-----------TSR------VLAYEFASNGSLHDILHGRKGVKGAQPGPVLS 169
G C DG +SR + EF G+L + R+G K + +
Sbjct: 69 YNG-CWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALEL 127
Query: 170 WQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAA 229
++Q KG++Y+H K +I+RD+K SN+ + D KI DF L +
Sbjct: 128 FEQ-------ITKGVDYIHSKK---LINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGK 177
Query: 230 RLHSTRVLGTFGYHAPE 246
R S GT Y +PE
Sbjct: 178 RXRSK---GTLRYMSPE 191
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 80/161 (49%), Gaps = 19/161 (11%)
Query: 69 FGTNALIGEGSYGRVYYGIL-----KSGHAAAIKKLDASKQP--DEEFLAQVSMVSRLKH 121
F ++G G++G VY G+ K AIK+L + P ++E L + +++ + +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAA 181
+ +LLG C+ T +++ + G L D + K G+Q +L+W V A
Sbjct: 80 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQY--LLNW------CVQIA 130
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSN 222
KG+ YL ++ ++HRD+ + NVL+ KI DF L+
Sbjct: 131 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 168
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 78/157 (49%), Gaps = 14/157 (8%)
Query: 75 IGEGSYGRVYYG----ILKSGHA---AAIKKLDASKQPDE--EFLAQVSMVSRLKHENFV 125
+G+GS+G VY G I+K G A A+K ++ S E EFL + S++ + V
Sbjct: 25 LGQGSFGMVYEGNARDIIK-GEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 126 QLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPG-PVLSWQQRVKIAVGAAKGL 184
+LLG G ++ E ++G L L + PG P + Q+ +++A A G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 185 EYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 221
YL+ K +HR++ + N ++ D KI DF ++
Sbjct: 144 AYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMT 177
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 79/161 (49%), Gaps = 19/161 (11%)
Query: 69 FGTNALIGEGSYGRVYYGIL-----KSGHAAAIKKLDASKQP--DEEFLAQVSMVSRLKH 121
F ++G G++G VY G+ K AIK+L + P ++E L + +++ + +
Sbjct: 27 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 86
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAA 181
+ +LLG C+ T +++ + G L D + K G+Q +L+W V A
Sbjct: 87 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQY--LLNW------CVQIA 137
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSN 222
KG+ YL D ++HRD+ + NVL+ KI DF L+
Sbjct: 138 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAK 175
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 80/161 (49%), Gaps = 19/161 (11%)
Query: 69 FGTNALIGEGSYGRVYYGIL-----KSGHAAAIKKLDASKQP--DEEFLAQVSMVSRLKH 121
F ++G G++G VY G+ K AIK+L + P ++E L + +++ + +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAA 181
+ +LLG C+ T +++ + G L D + K G+Q +L+W V A
Sbjct: 80 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQY--LLNW------CVQIA 130
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSN 222
KG+ YL ++ ++HRD+ + NVL+ KI DF L+
Sbjct: 131 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 168
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 80/161 (49%), Gaps = 19/161 (11%)
Query: 69 FGTNALIGEGSYGRVYYGIL-----KSGHAAAIKKLDASKQP--DEEFLAQVSMVSRLKH 121
F ++G G++G VY G+ K AIK+L + P ++E L + +++ + +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAA 181
+ +LLG C+ T +++ + G L D + K G+Q +L+W V A
Sbjct: 80 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQY--LLNW------CVQIA 130
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSN 222
KG+ YL ++ ++HRD+ + NVL+ KI DF L+
Sbjct: 131 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 168
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 78/157 (49%), Gaps = 14/157 (8%)
Query: 75 IGEGSYGRVYYG----ILKSGHA---AAIKKLDASKQPDE--EFLAQVSMVSRLKHENFV 125
+G+GS+G VY G I+K G A A+K ++ S E EFL + S++ + V
Sbjct: 26 LGQGSFGMVYEGNARDIIK-GEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 84
Query: 126 QLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPG-PVLSWQQRVKIAVGAAKGL 184
+LLG G ++ E ++G L L + PG P + Q+ +++A A G+
Sbjct: 85 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 144
Query: 185 EYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 221
YL+ K +HR++ + N ++ D KI DF ++
Sbjct: 145 AYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMT 178
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 80/161 (49%), Gaps = 19/161 (11%)
Query: 69 FGTNALIGEGSYGRVYYGIL-----KSGHAAAIKKLDASKQP--DEEFLAQVSMVSRLKH 121
F ++G G++G VY G+ K AIK+L + P ++E L + +++ + +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAA 181
+ +LLG C+ T +++ + G L D + K G+Q +L+W V A
Sbjct: 77 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQY--LLNW------CVQIA 127
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSN 222
KG+ YL ++ ++HRD+ + NVL+ KI DF L+
Sbjct: 128 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 165
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 80/161 (49%), Gaps = 19/161 (11%)
Query: 69 FGTNALIGEGSYGRVYYGIL-----KSGHAAAIKKLDASKQP--DEEFLAQVSMVSRLKH 121
F ++G G++G VY G+ K AIK+L + P ++E L + +++ + +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAA 181
+ +LLG C+ T +++ + G L D + K G+Q +L+W V A
Sbjct: 79 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQY--LLNW------CVQIA 129
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSN 222
KG+ YL ++ ++HRD+ + NVL+ KI DF L+
Sbjct: 130 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 167
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 80/161 (49%), Gaps = 19/161 (11%)
Query: 69 FGTNALIGEGSYGRVYYGIL-----KSGHAAAIKKLDASKQP--DEEFLAQVSMVSRLKH 121
F ++G G++G VY G+ K AIK+L + P ++E L + +++ + +
Sbjct: 23 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 82
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAA 181
+ +LLG C+ T +++ + G L D + K G+Q +L+W V A
Sbjct: 83 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQY--LLNW------CVQIA 133
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSN 222
KG+ YL ++ ++HRD+ + NVL+ KI DF L+
Sbjct: 134 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 171
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 83/188 (44%), Gaps = 18/188 (9%)
Query: 64 EITENFGTNALIGEGSYGRVYYG-ILKSGHAAAIKKLDASKQPD----EEFLAQVSMVSR 118
E E+F L+G+GS+ VY + +G AIK +D + +V + +
Sbjct: 8 EKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQ 67
Query: 119 LKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAV 178
LKH + ++L Y D L E NG ++ L R VK + ++
Sbjct: 68 LKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNR--VKPFSENEARHFMHQI---- 121
Query: 179 GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLG 238
G+ YLH I+HRD+ SN+L+ + KIADF L+ Q M H T + G
Sbjct: 122 --ITGMLYLHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQL-KMPHEKHYT-LCG 174
Query: 239 TFGYHAPE 246
T Y +PE
Sbjct: 175 TPNYISPE 182
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 80/161 (49%), Gaps = 19/161 (11%)
Query: 69 FGTNALIGEGSYGRVYYGIL-----KSGHAAAIKKLDASKQP--DEEFLAQVSMVSRLKH 121
F ++G G++G VY G+ K AIK+L + P ++E L + +++ + +
Sbjct: 42 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 101
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAA 181
+ +LLG C+ T +++ + G L D + K G+Q +L+W V A
Sbjct: 102 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQY--LLNW------CVQIA 152
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSN 222
KG+ YL ++ ++HRD+ + NVL+ KI DF L+
Sbjct: 153 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 190
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 89/197 (45%), Gaps = 23/197 (11%)
Query: 43 GAQAVKVQPIEVPAISVDELKEITENFGTNALIGEGSYGRVY----YGILKSGHA--AAI 96
G V + P ++P E +FG +G G++G+V YG++KS A A+
Sbjct: 17 GNNXVXIDPTQLPYDHKWEFPRNRLSFGKT--LGAGAFGKVVEATAYGLIKSDAAMTVAV 74
Query: 97 KKLDASKQPDEE--FLAQVSMVSRL-KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDIL 153
K L S E ++++ ++S L H N V LLG C G ++ E+ G L + L
Sbjct: 75 KMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFL 134
Query: 154 H-GRKGVKGAQPGPVL--------SWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSN 204
R ++ P + + + + AKG+ +L K + IHRD+ + N
Sbjct: 135 RRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARN 191
Query: 205 VLIFDDDVAKIADFDLS 221
+L+ + KI DF L+
Sbjct: 192 ILLTHGRITKICDFGLA 208
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 79/162 (48%), Gaps = 19/162 (11%)
Query: 68 NFGTNALIGEGSYGRVYYGIL-----KSGHAAAIKKLDASKQP--DEEFLAQVSMVSRLK 120
F ++G G++G VY G+ K AIK+L + P ++E L + +++ +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 121 HENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGA 180
+ + +LLG C+ T +++ + G L D + K G+Q +L+W V
Sbjct: 76 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQY--LLNW------CVQI 126
Query: 181 AKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSN 222
AKG+ YL D ++HRD+ + NVL+ KI DF L+
Sbjct: 127 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAK 165
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 79/161 (49%), Gaps = 19/161 (11%)
Query: 69 FGTNALIGEGSYGRVYYGIL-----KSGHAAAIKKLDASKQP--DEEFLAQVSMVSRLKH 121
F ++G G++G VY G+ K AIK+L + P ++E L + +++ + +
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAA 181
+ +LLG C+ T + L + G L D + K G+Q +L+W V A
Sbjct: 81 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQY--LLNW------CVQIA 131
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSN 222
KG+ YL ++ ++HRD+ + NVL+ KI DF L+
Sbjct: 132 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 169
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 80/173 (46%), Gaps = 16/173 (9%)
Query: 60 DELKEITENFGTNALIGEGSYGRVYYGILK------SGHAAAIKKLD--ASKQPDEEFLA 111
DE + E + +G+GS+G VY G+ K AIK ++ AS + EFL
Sbjct: 11 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 70
Query: 112 QVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVL--- 168
+ S++ + V+LLG G ++ E + G L L + + PVL
Sbjct: 71 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLR--PEMENNPVLAPP 128
Query: 169 SWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 221
S + +++A A G+ YL+ +HRD+ + N ++ +D KI DF ++
Sbjct: 129 SLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMT 178
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 80/161 (49%), Gaps = 19/161 (11%)
Query: 69 FGTNALIGEGSYGRVYYGIL-----KSGHAAAIKKLDASKQP--DEEFLAQVSMVSRLKH 121
F ++G G++G VY G+ K AIK+L + P ++E L + +++ + +
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAA 181
+ +LLG C+ T +++ + G L D + K G+Q +L+W V A
Sbjct: 84 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQY--LLNW------CVQIA 134
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSN 222
KG+ YL ++ ++HRD+ + NVL+ KI DF L+
Sbjct: 135 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 172
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 79/162 (48%), Gaps = 19/162 (11%)
Query: 68 NFGTNALIGEGSYGRVYYGIL-----KSGHAAAIKKLDASKQP--DEEFLAQVSMVSRLK 120
F ++G G++G VY G+ K AIK+L + P ++E L + +++ +
Sbjct: 10 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 69
Query: 121 HENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGA 180
+ + +LLG C+ T +++ + G L D + K G+Q +L+W V
Sbjct: 70 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQY--LLNW------CVQI 120
Query: 181 AKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSN 222
AKG+ YL D ++HRD+ + NVL+ KI DF L+
Sbjct: 121 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAK 159
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 79/161 (49%), Gaps = 19/161 (11%)
Query: 69 FGTNALIGEGSYGRVYYGIL-----KSGHAAAIKKLDASKQP--DEEFLAQVSMVSRLKH 121
F ++G G++G VY G+ K AIK+L + P ++E L + +++ + +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAA 181
+ +LLG C+ T + L + G L D + K G+Q +L+W V A
Sbjct: 77 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQY--LLNW------CVQIA 127
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSN 222
KG+ YL ++ ++HRD+ + NVL+ KI DF L+
Sbjct: 128 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 165
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 80/161 (49%), Gaps = 19/161 (11%)
Query: 69 FGTNALIGEGSYGRVYYGIL-----KSGHAAAIKKLDASKQP--DEEFLAQVSMVSRLKH 121
F ++G G++G VY G+ K AIK+L + P ++E L + +++ + +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAA 181
+ +LLG C+ T +++ + G L D + K G+Q +L+W V A
Sbjct: 77 PHVCRLLGICLTSTVQLIT-QLMPFGXLLDYVREHKDNIGSQY--LLNW------CVQIA 127
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSN 222
KG+ YL ++ ++HRD+ + NVL+ KI DF L+
Sbjct: 128 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 165
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 80/173 (46%), Gaps = 16/173 (9%)
Query: 60 DELKEITENFGTNALIGEGSYGRVYYGILK------SGHAAAIKKLD--ASKQPDEEFLA 111
DE + E + +G+GS+G VY G+ K AIK ++ AS + EFL
Sbjct: 12 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 71
Query: 112 QVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVL--- 168
+ S++ + V+LLG G ++ E + G L L + + PVL
Sbjct: 72 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLR--PEMENNPVLAPP 129
Query: 169 SWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 221
S + +++A A G+ YL+ +HRD+ + N ++ +D KI DF ++
Sbjct: 130 SLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMT 179
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 79/161 (49%), Gaps = 19/161 (11%)
Query: 69 FGTNALIGEGSYGRVYYGIL-----KSGHAAAIKKLDASKQP--DEEFLAQVSMVSRLKH 121
F ++G G++G VY G+ K AIK+L + P ++E L + +++ + +
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAA 181
+ +LLG C+ T + L + G L D + K G+Q +L+W V A
Sbjct: 78 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQY--LLNW------CVQIA 128
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSN 222
KG+ YL ++ ++HRD+ + NVL+ KI DF L+
Sbjct: 129 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 166
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 80/173 (46%), Gaps = 16/173 (9%)
Query: 60 DELKEITENFGTNALIGEGSYGRVYYGILK------SGHAAAIKKLD--ASKQPDEEFLA 111
DE + E + +G+GS+G VY G+ K AIK ++ AS + EFL
Sbjct: 11 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 70
Query: 112 QVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVL--- 168
+ S++ + V+LLG G ++ E + G L L + + PVL
Sbjct: 71 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLR--PEMENNPVLAPP 128
Query: 169 SWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 221
S + +++A A G+ YL+ +HRD+ + N ++ +D KI DF ++
Sbjct: 129 SLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMT 178
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 79/161 (49%), Gaps = 19/161 (11%)
Query: 69 FGTNALIGEGSYGRVYYGIL-----KSGHAAAIKKLDASKQP--DEEFLAQVSMVSRLKH 121
F ++G G++G VY G+ K AIK+L + P ++E L + +++ + +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAA 181
+ +LLG C+ T + L + G L D + K G+Q +L+W V A
Sbjct: 79 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQY--LLNW------CVQIA 129
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSN 222
KG+ YL ++ ++HRD+ + NVL+ KI DF L+
Sbjct: 130 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 167
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 85/216 (39%), Gaps = 49/216 (22%)
Query: 55 PAISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVS 114
P++ +D LK + LIG G YG VY G L A+K + + + +
Sbjct: 8 PSLDLDNLKLL-------ELIGRGRYGAVYKGSLDE-RPVAVKVFSFANRQNFINEKNIY 59
Query: 115 MVSRLKHENFVQLL----GYCVDGTSR-VLAYEFASNGSLHDILHGRKGVKGAQPGPVLS 169
V ++H+N + + DG +L E+ NGSL L
Sbjct: 60 RVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS----------D 109
Query: 170 WQQRVKIAVGAAKGLEYLHEKA------DPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQ 223
W ++A +GL YLH + P I HRD+ S NVL+ +D I+DF LS
Sbjct: 110 WVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLS-- 167
Query: 224 APDMAARLHSTRV-------------LGTFGYHAPE 246
RL R+ +GT Y APE
Sbjct: 168 -----MRLTGNRLVRPGEEDNAAISEVGTIRYMAPE 198
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 79/161 (49%), Gaps = 19/161 (11%)
Query: 69 FGTNALIGEGSYGRVYYGIL-----KSGHAAAIKKLDASKQP--DEEFLAQVSMVSRLKH 121
F ++G G++G VY G+ K AIK+L + P ++E L + +++ + +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAA 181
+ +LLG C+ T + L + G L D + K G+Q +L+W V A
Sbjct: 80 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQY--LLNW------CVQIA 130
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSN 222
KG+ YL ++ ++HRD+ + NVL+ KI DF L+
Sbjct: 131 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 168
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 85/178 (47%), Gaps = 18/178 (10%)
Query: 75 IGEGSYGRVYYGILKS-GHAAAIK--KLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYC 131
+G G+Y VY G+ K+ G A+K KLD+ + + ++S++ LKHEN V+L
Sbjct: 13 LGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVI 72
Query: 132 VDGTSRVLAYEFASNGSLHDILHGR---KGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLH 188
L +EF N L + R +G + V +Q ++ +GL + H
Sbjct: 73 HTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQL------LQGLAFCH 125
Query: 189 EKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
E I+HRD+K N+LI K+ DF L+ +A + S+ V+ T Y AP+
Sbjct: 126 ENK---ILHRDLKPQNLLINKRGQLKLGDFGLA-RAFGIPVNTFSSEVV-TLWYRAPD 178
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 80/173 (46%), Gaps = 16/173 (9%)
Query: 60 DELKEITENFGTNALIGEGSYGRVYYGILK------SGHAAAIKKLD--ASKQPDEEFLA 111
DE + E + +G+GS+G VY G+ K AIK ++ AS + EFL
Sbjct: 18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 77
Query: 112 QVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVL--- 168
+ S++ + V+LLG G ++ E + G L L + + PVL
Sbjct: 78 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLR--PEMENNPVLAPP 135
Query: 169 SWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 221
S + +++A A G+ YL+ +HRD+ + N ++ +D KI DF ++
Sbjct: 136 SLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMT 185
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 80/173 (46%), Gaps = 16/173 (9%)
Query: 60 DELKEITENFGTNALIGEGSYGRVYYGILK------SGHAAAIKKLD--ASKQPDEEFLA 111
DE + E + +G+GS+G VY G+ K AIK ++ AS + EFL
Sbjct: 3 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 62
Query: 112 QVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVL--- 168
+ S++ + V+LLG G ++ E + G L L + + PVL
Sbjct: 63 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLR--PEMENNPVLAPP 120
Query: 169 SWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 221
S + +++A A G+ YL+ +HRD+ + N ++ +D KI DF ++
Sbjct: 121 SLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMT 170
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 80/173 (46%), Gaps = 16/173 (9%)
Query: 60 DELKEITENFGTNALIGEGSYGRVYYGILK------SGHAAAIKKLD--ASKQPDEEFLA 111
DE + E + +G+GS+G VY G+ K AIK ++ AS + EFL
Sbjct: 9 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 68
Query: 112 QVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVL--- 168
+ S++ + V+LLG G ++ E + G L L + + PVL
Sbjct: 69 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLR--PEMENNPVLAPP 126
Query: 169 SWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 221
S + +++A A G+ YL+ +HRD+ + N ++ +D KI DF ++
Sbjct: 127 SLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMT 176
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 89/197 (45%), Gaps = 23/197 (11%)
Query: 43 GAQAVKVQPIEVPAISVDELKEITENFGTNALIGEGSYGRVY----YGILKSGHA--AAI 96
G V + P ++P E +FG +G G++G+V YG++KS A A+
Sbjct: 1 GNNYVYIDPTQLPYDHKWEFPRNRLSFGKT--LGAGAFGKVVEATAYGLIKSDAAMTVAV 58
Query: 97 KKLDASKQPDEE--FLAQVSMVSRL-KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDIL 153
K L S E ++++ ++S L H N V LLG C G ++ E+ G L + L
Sbjct: 59 KMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFL 118
Query: 154 H-GRKGVKGAQPGPVL--------SWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSN 204
R ++ P + + + + AKG+ +L K + IHRD+ + N
Sbjct: 119 RRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARN 175
Query: 205 VLIFDDDVAKIADFDLS 221
+L+ + KI DF L+
Sbjct: 176 ILLTHGRITKICDFGLA 192
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 80/173 (46%), Gaps = 16/173 (9%)
Query: 60 DELKEITENFGTNALIGEGSYGRVYYGILK------SGHAAAIKKLD--ASKQPDEEFLA 111
DE + E + +G+GS+G VY G+ K AIK ++ AS + EFL
Sbjct: 5 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 64
Query: 112 QVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVL--- 168
+ S++ + V+LLG G ++ E + G L L + + PVL
Sbjct: 65 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLR--PEMENNPVLAPP 122
Query: 169 SWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 221
S + +++A A G+ YL+ +HRD+ + N ++ +D KI DF ++
Sbjct: 123 SLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMT 172
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 80/173 (46%), Gaps = 16/173 (9%)
Query: 60 DELKEITENFGTNALIGEGSYGRVYYGILK------SGHAAAIKKLD--ASKQPDEEFLA 111
DE + E + +G+GS+G VY G+ K AIK ++ AS + EFL
Sbjct: 12 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 71
Query: 112 QVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVL--- 168
+ S++ + V+LLG G ++ E + G L L + + PVL
Sbjct: 72 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLR--PEMENNPVLAPP 129
Query: 169 SWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 221
S + +++A A G+ YL+ +HRD+ + N ++ +D KI DF ++
Sbjct: 130 SLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMT 179
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 79/161 (49%), Gaps = 19/161 (11%)
Query: 69 FGTNALIGEGSYGRVYYGIL-----KSGHAAAIKKLDASKQP--DEEFLAQVSMVSRLKH 121
F ++G G++G VY G+ K AIK+L + P ++E L + +++ + +
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAA 181
+ +LLG C+ T + L + G L D + K G+Q +L+W V A
Sbjct: 78 PHVCRLLGICLTSTVQ-LIMQLMPFGXLLDYVREHKDNIGSQY--LLNW------CVQIA 128
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSN 222
KG+ YL ++ ++HRD+ + NVL+ KI DF L+
Sbjct: 129 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 166
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 73/161 (45%), Gaps = 22/161 (13%)
Query: 75 IGEGSYGRVYYGILK-----SGHAAAIKKLDASKQPDEE--FLAQVSMVSRLKHENFVQL 127
+GEG +G+V +G A+K L A P + ++ ++ L HE+ ++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 128 LGYCVDG--TSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLE 185
G C D S L E+ GSL D L P + Q + A +G+
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYL----------PRHSIGLAQLLLFAQQICEGMA 131
Query: 186 YLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
YLH + H IHR++ + NVL+ +D + KI DF L+ P+
Sbjct: 132 YLHSQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPE 169
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 85/184 (46%), Gaps = 17/184 (9%)
Query: 67 ENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQPD---EEFLAQVSMVSRLKHE 122
ENF IGEG+YG VY K +G A+KK+ + + + ++S++ L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 123 NFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAK 182
N V+LL L +EF + L D + + G P P++ +
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKDFMDA-SALTGI-PLPLIK-----SYLFQLLQ 114
Query: 183 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 242
GL + H ++HRD+K N+LI + K+ADF L+ +A + R + V+ T Y
Sbjct: 115 GLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVV-TLWY 169
Query: 243 HAPE 246
APE
Sbjct: 170 RAPE 173
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 80/173 (46%), Gaps = 16/173 (9%)
Query: 60 DELKEITENFGTNALIGEGSYGRVYYGILK------SGHAAAIKKLD--ASKQPDEEFLA 111
DE + E + +G+GS+G VY G+ K AIK ++ AS + EFL
Sbjct: 40 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 99
Query: 112 QVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVL--- 168
+ S++ + V+LLG G ++ E + G L L + + PVL
Sbjct: 100 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLR--PEMENNPVLAPP 157
Query: 169 SWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 221
S + +++A A G+ YL+ +HRD+ + N ++ +D KI DF ++
Sbjct: 158 SLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMT 207
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 89/197 (45%), Gaps = 23/197 (11%)
Query: 43 GAQAVKVQPIEVPAISVDELKEITENFGTNALIGEGSYGRVY----YGILKSGHA--AAI 96
G V + P ++P E +FG +G G++G+V YG++KS A A+
Sbjct: 24 GNNYVYIDPTQLPYDHKWEFPRNRLSFGKT--LGAGAFGKVVEATAYGLIKSDAAMTVAV 81
Query: 97 KKLDASKQPDEE--FLAQVSMVSRL-KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDIL 153
K L S E ++++ ++S L H N V LLG C G ++ E+ G L + L
Sbjct: 82 KMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFL 141
Query: 154 H-GRKGVKGAQPGPVL--------SWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSN 204
R ++ P + + + + AKG+ +L K + IHRD+ + N
Sbjct: 142 RRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARN 198
Query: 205 VLIFDDDVAKIADFDLS 221
+L+ + KI DF L+
Sbjct: 199 ILLTHGRITKICDFGLA 215
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 89/197 (45%), Gaps = 23/197 (11%)
Query: 43 GAQAVKVQPIEVPAISVDELKEITENFGTNALIGEGSYGRVY----YGILKSGHA--AAI 96
G V + P ++P E +FG +G G++G+V YG++KS A A+
Sbjct: 24 GNNYVYIDPTQLPYDHKWEFPRNRLSFGKT--LGAGAFGKVVEATAYGLIKSDAAMTVAV 81
Query: 97 KKLDASKQPDEE--FLAQVSMVSRL-KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDIL 153
K L S E ++++ ++S L H N V LLG C G ++ E+ G L + L
Sbjct: 82 KMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFL 141
Query: 154 H-GRKGVKGAQPGPVL--------SWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSN 204
R ++ P + + + + AKG+ +L K + IHRD+ + N
Sbjct: 142 RRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARN 198
Query: 205 VLIFDDDVAKIADFDLS 221
+L+ + KI DF L+
Sbjct: 199 ILLTHGRITKICDFGLA 215
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 90/185 (48%), Gaps = 23/185 (12%)
Query: 68 NFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASK-QPD--EEFLAQVSMVSRLKHEN 123
N+ IG+G++ +V + +G AIK +D ++ P ++ +V ++ L H N
Sbjct: 13 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 72
Query: 124 FVQLLGYCVDGTSRVLAYEFASNGSLHDIL--HGRKGVKGAQPGPVLSWQQRVKIAVGAA 181
V+L + L E+AS G + D L HGR K A+ ++Q V
Sbjct: 73 IVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARS----KFRQIVS------ 122
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 241
++Y H+K I+HRD+K+ N+L+ D KIADF SN+ + +L + G+
Sbjct: 123 -AVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFT-VGGKLDT--FCGSPP 175
Query: 242 YHAPE 246
Y APE
Sbjct: 176 YAAPE 180
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 80/162 (49%), Gaps = 20/162 (12%)
Query: 68 NFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASK-QPD--EEFLAQVSMVSRLKHEN 123
N+ IG+G++ +V + +G AIK +D ++ P ++ +V ++ L H N
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75
Query: 124 FVQLLGYCVDGTSRVLAYEFASNGSLHDIL--HGRKGVKGAQPGPVLSWQQRVKIAVGAA 181
V+L + L E+AS G + D L HGR K A+ ++Q V
Sbjct: 76 IVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARS----KFRQIVS------ 125
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQ 223
++Y H+K I+HRD+K+ N+L+ D KIADF SN+
Sbjct: 126 -AVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNE 163
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 76/166 (45%), Gaps = 13/166 (7%)
Query: 74 LIGEGSYGR-VYYGILKSGHAAAIKKL-DASKQPDEEFLAQVSMVSRLKHENFVQLLGYC 131
++G+G +G+ + ++G +K+L ++ FL +V ++ L+H N ++ +G
Sbjct: 17 VLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVL 76
Query: 132 VDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKA 191
E+ G+L I+ K + P W QRV A A G+ YLH
Sbjct: 77 YKDKRLNFITEYIKGGTLRGII---KSMDSQYP-----WSQRVSFAKDIASGMAYLHSM- 127
Query: 192 DPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVL 237
+IIHRD+ S N L+ ++ +ADF L+ D + R L
Sbjct: 128 --NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSL 171
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 89/197 (45%), Gaps = 23/197 (11%)
Query: 43 GAQAVKVQPIEVPAISVDELKEITENFGTNALIGEGSYGRVY----YGILKSGHA--AAI 96
G V + P ++P E +FG +G G++G+V YG++KS A A+
Sbjct: 19 GNNYVYIDPTQLPYDHKWEFPRNRLSFGKT--LGAGAFGKVVEATAYGLIKSDAAMTVAV 76
Query: 97 KKLDASKQPDEE--FLAQVSMVSRL-KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDIL 153
K L S E ++++ ++S L H N V LLG C G ++ E+ G L + L
Sbjct: 77 KMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFL 136
Query: 154 H-GRKGVKGAQPGPVL--------SWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSN 204
R ++ P + + + + AKG+ +L K + IHRD+ + N
Sbjct: 137 RRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARN 193
Query: 205 VLIFDDDVAKIADFDLS 221
+L+ + KI DF L+
Sbjct: 194 ILLTHGRITKICDFGLA 210
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 73/161 (45%), Gaps = 22/161 (13%)
Query: 75 IGEGSYGRVYYGILK-----SGHAAAIKKLDASKQPDEE--FLAQVSMVSRLKHENFVQL 127
+GEG +G+V +G A+K L A P + ++ ++ L HE+ ++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 128 LGYCVDG--TSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLE 185
G C D S L E+ GSL D L P + Q + A +G+
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYL----------PRHSIGLAQLLLFAQQICEGMA 131
Query: 186 YLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
YLH + H IHR++ + NVL+ +D + KI DF L+ P+
Sbjct: 132 YLHAQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPE 169
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 83/186 (44%), Gaps = 21/186 (11%)
Query: 67 ENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQPD---EEFLAQVSMVSRLKHE 122
ENF IGEG+YG VY K +G A+KK+ + + + ++S++ L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 123 NFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQ--PGPVLSWQQRVKIAVGA 180
N V+LL L +EF LH L P P++
Sbjct: 63 NIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK-----SYLFQL 112
Query: 181 AKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTF 240
+GL + H ++HRD+K N+LI + K+ADF L+ +A + R ++ V+ T
Sbjct: 113 LQGLSFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEVV-TL 167
Query: 241 GYHAPE 246
Y APE
Sbjct: 168 WYRAPE 173
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 92/193 (47%), Gaps = 36/193 (18%)
Query: 73 ALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQPDEEF----LAQVSMVSRLKHENFVQL 127
A IG+G++G V+ K+G A+KK+ + E F L ++ ++ LKHEN V L
Sbjct: 24 AKIGQGTFGEVFKARHRKTGQKVALKKVLMENE-KEGFPITALREIKILQLLKHENVVNL 82
Query: 128 LGYCVDGTSRV--------LAYEFASN---GSLHDILHGRKGVKGAQPGPVLSWQQRVKI 176
+ C S L ++F + G L ++L VK LS +RV
Sbjct: 83 IEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL-----VKFT-----LSEIKRVMQ 132
Query: 177 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS---NQAPDMAARLHS 233
+ GL Y+H I+HRD+K++NVLI D V K+ADF L+ + A + +
Sbjct: 133 ML--LNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYX 187
Query: 234 TRVLGTFGYHAPE 246
RV+ T Y PE
Sbjct: 188 NRVV-TLWYRPPE 199
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 76/185 (41%), Gaps = 21/185 (11%)
Query: 67 ENFGTNALIGEGSYGRVYYGILKSGH-AAAIKKLDASKQPDE----EFLAQVSMVSRLKH 121
++F +G+G +G VY K H A+K L S+ E + ++ + + L H
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAA 181
N ++L Y D L E+A G L+ K Q Q+ I A
Sbjct: 83 PNILRLYNYFYDRRRIYLILEYAPRGELY---------KELQKSCTFDEQRTATIMEELA 133
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 241
L Y H K +IHRDIK N+L+ KIADF S AP L + GT
Sbjct: 134 DALMYCHGKK---VIHRDIKPENLLLGLKGELKIADFGWSVHAPS----LRRKTMCGTLD 186
Query: 242 YHAPE 246
Y PE
Sbjct: 187 YLPPE 191
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 88/210 (41%), Gaps = 48/210 (22%)
Query: 68 NFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQ 126
+F LIG G +G+V+ + G I+++ K +E+ +V +++L H N V
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRV---KYNNEKAEREVKALAKLDHVNIVH 69
Query: 127 LLGYCVDG------------------------TSR------VLAYEFASNGSLHDILHGR 156
G C DG +SR + EF G+L + R
Sbjct: 70 YNG-CWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR 128
Query: 157 KGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIA 216
+G K + + ++Q KG++Y+H K +IHRD+K SN+ + D KI
Sbjct: 129 RGEKLDKVLALELFEQ-------ITKGVDYIHSKK---LIHRDLKPSNIFLVDTKQVKIG 178
Query: 217 DFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
DF L + R TR GT Y +PE
Sbjct: 179 DFGLVTSLKNDGKR---TRSKGTLRYMSPE 205
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 72/144 (50%), Gaps = 17/144 (11%)
Query: 105 PDEEFLAQVSMVSRLKHENFVQLLGYCVDGTS--RVLAYEFASNGSLHDILHGRKGVKGA 162
P E+ +++++ +L H N V+L+ D + +E + G + + V
Sbjct: 79 PIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVME-------VPTL 131
Query: 163 QPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSN 222
+P LS Q KG+EYLH + IIHRDIK SN+L+ +D KIADF +SN
Sbjct: 132 KP---LSEDQARFYFQDLIKGIEYLHYQK---IIHRDIKPSNLLVGEDGHIKIADFGVSN 185
Query: 223 QAPDMAARLHSTRVLGTFGYHAPE 246
+ A L +T +GT + APE
Sbjct: 186 EFKGSDALLSNT--VGTPAFMAPE 207
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 81/177 (45%), Gaps = 21/177 (11%)
Query: 75 IGEGSYGRVYYGILKSGHAAAIKKLDASKQPD---EEFLAQVSMVSRLKHENFVQLLGYC 131
IGEG+YG VY G A+KK+ K+ + + ++S++ LKH N V+L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 132 VDGTSRVLAYEFASN--GSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHE 189
VL +E L D+ G G++ L + G+ Y H
Sbjct: 70 HTKKRLVLVFEHLDQDLKKLLDVCEG--GLESVTAKSFL---------LQLLNGIAYCH- 117
Query: 190 KADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
D ++HRD+K N+LI + KIADF L+ +A + R ++ V+ T Y AP+
Sbjct: 118 --DRRVLHRDLKPQNLLINREGELKIADFGLA-RAFGIPVRKYTHEVV-TLWYRAPD 170
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 81/177 (45%), Gaps = 21/177 (11%)
Query: 75 IGEGSYGRVYYGILKSGHAAAIKKLDASKQPD---EEFLAQVSMVSRLKHENFVQLLGYC 131
IGEG+YG VY G A+KK+ K+ + + ++S++ LKH N V+L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 132 VDGTSRVLAYEFASN--GSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHE 189
VL +E L D+ G G++ L + G+ Y H
Sbjct: 70 HTKKRLVLVFEHLDQDLKKLLDVCEG--GLESVTAKSFL---------LQLLNGIAYCH- 117
Query: 190 KADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
D ++HRD+K N+LI + KIADF L+ +A + R ++ V+ T Y AP+
Sbjct: 118 --DRRVLHRDLKPQNLLINREGELKIADFGLA-RAFGIPVRKYTHEVV-TLWYRAPD 170
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 78/159 (49%), Gaps = 19/159 (11%)
Query: 75 IGEGSYGRV---YYGILK--SGHAAAIKKLDASKQPD-EEFLAQVSMVSRLKHENFVQLL 128
+G+G++G V Y L+ +G A+KKL S + +F ++ ++ L+H+N V+
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 129 GYCVDGTSR--VLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEY 186
G C R L E+ GSL D L K + +L + ++ KG+EY
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQI------CKGMEY 129
Query: 187 LHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAP 225
L K IHRD+ + N+L+ +++ KI DF L+ P
Sbjct: 130 LGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLP 165
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 78/159 (49%), Gaps = 19/159 (11%)
Query: 75 IGEGSYGRV---YYGILK--SGHAAAIKKLDASKQPD-EEFLAQVSMVSRLKHENFVQLL 128
+G+G++G V Y L+ +G A+KKL S + +F ++ ++ L+H+N V+
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 83
Query: 129 GYCVDGTSR--VLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEY 186
G C R L E+ GSL D L K + +L + ++ KG+EY
Sbjct: 84 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQI------CKGMEY 135
Query: 187 LHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAP 225
L K IHRD+ + N+L+ +++ KI DF L+ P
Sbjct: 136 LGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLP 171
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 78/159 (49%), Gaps = 19/159 (11%)
Query: 75 IGEGSYGRV---YYGILK--SGHAAAIKKLDASKQPD-EEFLAQVSMVSRLKHENFVQLL 128
+G+G++G V Y L+ +G A+KKL S + +F ++ ++ L+H+N V+
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 108
Query: 129 GYCVDGTSR--VLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEY 186
G C R L E+ GSL D L K + +L + ++ KG+EY
Sbjct: 109 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQI------CKGMEY 160
Query: 187 LHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAP 225
L K IHRD+ + N+L+ +++ KI DF L+ P
Sbjct: 161 LGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLP 196
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 78/157 (49%), Gaps = 19/157 (12%)
Query: 69 FGTNALIGEGSYGRVYYGIL-----KSGHAAAIKKLDASKQP--DEEFLAQVSMVSRLKH 121
F ++G G++G VY G+ K AIK+L + P ++E L + +++ + +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAA 181
+ +LLG C+ T +++ + G L D + K G+Q +L+W V A
Sbjct: 77 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQY--LLNW------CVQIA 127
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADF 218
KG+ YL ++ ++HRD+ + NVL+ KI DF
Sbjct: 128 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDF 161
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 78/159 (49%), Gaps = 19/159 (11%)
Query: 75 IGEGSYGRV---YYGILK--SGHAAAIKKLDASKQPD-EEFLAQVSMVSRLKHENFVQLL 128
+G+G++G V Y L+ +G A+KKL S + +F ++ ++ L+H+N V+
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 129 GYCVDGTSR--VLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEY 186
G C R L E+ GSL D L K + +L + ++ KG+EY
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQI------CKGMEY 147
Query: 187 LHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAP 225
L K IHRD+ + N+L+ +++ KI DF L+ P
Sbjct: 148 LGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLP 183
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 81/164 (49%), Gaps = 21/164 (12%)
Query: 62 LKEITENFGTNALIGEGSYGRVYYGIL-----KSGHAAAIKKLDASKQP--DEEFLAQVS 114
LKE F ++G G++G VY G+ K AIK+L + P ++E L +
Sbjct: 14 LKET--EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 115 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 174
+++ + + + +LLG C+ T +++ + G L D + K G+Q +L+W
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQY--LLNW---- 124
Query: 175 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADF 218
V AKG+ YL ++ ++HRD+ + NVL+ KI DF
Sbjct: 125 --CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDF 163
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 83/186 (44%), Gaps = 21/186 (11%)
Query: 67 ENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQPD---EEFLAQVSMVSRLKHE 122
ENF IGEG+YG VY K +G A+KK+ + + + ++S++ L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 123 NFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQ--PGPVLSWQQRVKIAVGA 180
N V+LL L +EF LH L P P++
Sbjct: 63 NIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK-----SYLFQL 112
Query: 181 AKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTF 240
+GL + H ++HRD+K N+LI + K+ADF L+ +A + R ++ V+ T
Sbjct: 113 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEVV-TL 167
Query: 241 GYHAPE 246
Y APE
Sbjct: 168 WYRAPE 173
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 83/186 (44%), Gaps = 21/186 (11%)
Query: 67 ENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQPD---EEFLAQVSMVSRLKHE 122
ENF IGEG+YG VY K +G A+KK+ + + + ++S++ L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 123 NFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQ--PGPVLSWQQRVKIAVGA 180
N V+LL L +EF LH L P P++
Sbjct: 62 NIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK-----SYLFQL 111
Query: 181 AKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTF 240
+GL + H ++HRD+K N+LI + K+ADF L+ +A + R ++ V+ T
Sbjct: 112 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEVV-TL 166
Query: 241 GYHAPE 246
Y APE
Sbjct: 167 WYRAPE 172
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 78/159 (49%), Gaps = 19/159 (11%)
Query: 75 IGEGSYGRV---YYGILK--SGHAAAIKKLDASKQPD-EEFLAQVSMVSRLKHENFVQLL 128
+G+G++G V Y L+ +G A+KKL S + +F ++ ++ L+H+N V+
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 129 GYCVDGTSR--VLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEY 186
G C R L E+ GSL D L K + +L + ++ KG+EY
Sbjct: 76 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQI------CKGMEY 127
Query: 187 LHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAP 225
L K IHRD+ + N+L+ +++ KI DF L+ P
Sbjct: 128 LGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLP 163
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 78/159 (49%), Gaps = 19/159 (11%)
Query: 75 IGEGSYGRV---YYGILK--SGHAAAIKKLDASKQPD-EEFLAQVSMVSRLKHENFVQLL 128
+G+G++G V Y L+ +G A+KKL S + +F ++ ++ L+H+N V+
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 84
Query: 129 GYCVDGTSR--VLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEY 186
G C R L E+ GSL D L K + +L + ++ KG+EY
Sbjct: 85 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQI------CKGMEY 136
Query: 187 LHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAP 225
L K IHRD+ + N+L+ +++ KI DF L+ P
Sbjct: 137 LGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLP 172
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 84/174 (48%), Gaps = 21/174 (12%)
Query: 56 AISVDELKEITENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQPD---EEFLA 111
A S DE I N+ IG+G++ +V + +G A+K +D ++ ++
Sbjct: 4 ATSADEQPHIG-NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR 62
Query: 112 QVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDIL--HGRKGVKGAQPGPVLS 169
+V ++ L H N V+L + L E+AS G + D L HGR K A+
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA----K 118
Query: 170 WQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQ 223
++Q V ++Y H+K I+HRD+K+ N+L+ D KIADF SN+
Sbjct: 119 FRQIVS-------AVQYCHQK---FIVHRDLKAENLLLDADMNIKIADFGFSNE 162
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 84/174 (48%), Gaps = 21/174 (12%)
Query: 56 AISVDELKEITENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQPD---EEFLA 111
A S DE I N+ IG+G++ +V + +G A+K +D ++ ++
Sbjct: 4 ATSADEQPHIG-NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR 62
Query: 112 QVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDIL--HGRKGVKGAQPGPVLS 169
+V ++ L H N V+L + L E+AS G + D L HGR K A+
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA----K 118
Query: 170 WQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQ 223
++Q V ++Y H+K I+HRD+K+ N+L+ D KIADF SN+
Sbjct: 119 FRQIVS-------AVQYCHQK---FIVHRDLKAENLLLDADMNIKIADFGFSNE 162
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 78/157 (49%), Gaps = 19/157 (12%)
Query: 69 FGTNALIGEGSYGRVYYGIL-----KSGHAAAIKKLDASKQP--DEEFLAQVSMVSRLKH 121
F ++G G++G VY G+ K AIK+L + P ++E L + +++ + +
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAA 181
+ +LLG C+ T +++ + G L D + K G+Q +L+W V A
Sbjct: 84 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQY--LLNW------CVQIA 134
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADF 218
KG+ YL ++ ++HRD+ + NVL+ KI DF
Sbjct: 135 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDF 168
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 78/159 (49%), Gaps = 19/159 (11%)
Query: 75 IGEGSYGRV---YYGILK--SGHAAAIKKLDASKQPD-EEFLAQVSMVSRLKHENFVQLL 128
+G+G++G V Y L+ +G A+KKL S + +F ++ ++ L+H+N V+
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 129 GYCVDGTSR--VLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEY 186
G C R L E+ GSL D L K + +L + ++ KG+EY
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQI------CKGMEY 129
Query: 187 LHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAP 225
L K IHRD+ + N+L+ +++ KI DF L+ P
Sbjct: 130 LGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLP 165
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 78/159 (49%), Gaps = 19/159 (11%)
Query: 75 IGEGSYGRV---YYGILK--SGHAAAIKKLDASKQPD-EEFLAQVSMVSRLKHENFVQLL 128
+G+G++G V Y L+ +G A+KKL S + +F ++ ++ L+H+N V+
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 129 GYCVDGTSR--VLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEY 186
G C R L E+ GSL D L K + +L + ++ KG+EY
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQI------CKGMEY 147
Query: 187 LHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAP 225
L K IHRD+ + N+L+ +++ KI DF L+ P
Sbjct: 148 LGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLP 183
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 78/159 (49%), Gaps = 19/159 (11%)
Query: 75 IGEGSYGRV---YYGILK--SGHAAAIKKLDASKQPD-EEFLAQVSMVSRLKHENFVQLL 128
+G+G++G V Y L+ +G A+KKL S + +F ++ ++ L+H+N V+
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 129 GYCVDGTSR--VLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEY 186
G C R L E+ GSL D L K + +L + ++ KG+EY
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQI------CKGMEY 132
Query: 187 LHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAP 225
L K IHRD+ + N+L+ +++ KI DF L+ P
Sbjct: 133 LGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLP 168
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 78/159 (49%), Gaps = 19/159 (11%)
Query: 75 IGEGSYGRV---YYGILK--SGHAAAIKKLDASKQPD-EEFLAQVSMVSRLKHENFVQLL 128
+G+G++G V Y L+ +G A+KKL S + +F ++ ++ L+H+N V+
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 129 GYCVDGTSR--VLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEY 186
G C R L E+ GSL D L K + +L + ++ KG+EY
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQI------CKGMEY 129
Query: 187 LHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAP 225
L K IHRD+ + N+L+ +++ KI DF L+ P
Sbjct: 130 LGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLP 165
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 83/186 (44%), Gaps = 21/186 (11%)
Query: 67 ENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQPD---EEFLAQVSMVSRLKHE 122
ENF IGEG+YG VY K +G A+KK+ + + + ++S++ L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 123 NFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQ--PGPVLSWQQRVKIAVGA 180
N V+LL L +EF LH L P P++
Sbjct: 62 NIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK-----SYLFQL 111
Query: 181 AKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTF 240
+GL + H ++HRD+K N+LI + K+ADF L+ +A + R ++ V+ T
Sbjct: 112 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEVV-TL 166
Query: 241 GYHAPE 246
Y APE
Sbjct: 167 WYRAPE 172
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 78/159 (49%), Gaps = 19/159 (11%)
Query: 75 IGEGSYGRV---YYGILK--SGHAAAIKKLDASKQPD-EEFLAQVSMVSRLKHENFVQLL 128
+G+G++G V Y L+ +G A+KKL S + +F ++ ++ L+H+N V+
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 82
Query: 129 GYCVDGTSR--VLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEY 186
G C R L E+ GSL D L K + +L + ++ KG+EY
Sbjct: 83 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQI------CKGMEY 134
Query: 187 LHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAP 225
L K IHRD+ + N+L+ +++ KI DF L+ P
Sbjct: 135 LGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLP 170
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 84/174 (48%), Gaps = 21/174 (12%)
Query: 56 AISVDELKEITENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQPD---EEFLA 111
A S DE I N+ IG+G++ +V + +G A+K +D ++ ++
Sbjct: 4 ATSADEQPHIG-NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR 62
Query: 112 QVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDIL--HGRKGVKGAQPGPVLS 169
+V ++ L H N V+L + L E+AS G + D L HGR K A+
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA----K 118
Query: 170 WQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQ 223
++Q V ++Y H+K I+HRD+K+ N+L+ D KIADF SN+
Sbjct: 119 FRQIVS-------AVQYCHQK---FIVHRDLKAENLLLDADMNIKIADFGFSNE 162
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 83/186 (44%), Gaps = 21/186 (11%)
Query: 67 ENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQPD---EEFLAQVSMVSRLKHE 122
ENF IGEG+YG VY K +G A+KK+ + + + ++S++ L H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 123 NFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQ--PGPVLSWQQRVKIAVGA 180
N V+LL L +EF LH L P P++
Sbjct: 64 NIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK-----SYLFQL 113
Query: 181 AKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTF 240
+GL + H ++HRD+K N+LI + K+ADF L+ +A + R ++ V+ T
Sbjct: 114 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEVV-TL 168
Query: 241 GYHAPE 246
Y APE
Sbjct: 169 WYRAPE 174
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 83/186 (44%), Gaps = 21/186 (11%)
Query: 67 ENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQPD---EEFLAQVSMVSRLKHE 122
ENF IGEG+YG VY K +G A+KK+ + + + ++S++ L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 123 NFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQ--PGPVLSWQQRVKIAVGA 180
N V+LL L +EF LH L P P++
Sbjct: 63 NIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK-----SYLFQL 112
Query: 181 AKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTF 240
+GL + H ++HRD+K N+LI + K+ADF L+ +A + R ++ V+ T
Sbjct: 113 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEVV-TL 167
Query: 241 GYHAPE 246
Y APE
Sbjct: 168 WYRAPE 173
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 78/159 (49%), Gaps = 19/159 (11%)
Query: 75 IGEGSYGRV---YYGILK--SGHAAAIKKLDASKQPD-EEFLAQVSMVSRLKHENFVQLL 128
+G+G++G V Y L+ +G A+KKL S + +F ++ ++ L+H+N V+
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 76
Query: 129 GYCVDGTSR--VLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEY 186
G C R L E+ GSL D L K + +L + ++ KG+EY
Sbjct: 77 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQI------CKGMEY 128
Query: 187 LHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAP 225
L K IHRD+ + N+L+ +++ KI DF L+ P
Sbjct: 129 LGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLP 164
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 82/164 (50%), Gaps = 21/164 (12%)
Query: 62 LKEITENFGTNALIGEGSYGRVYYGIL-----KSGHAAAIKKLDASKQP--DEEFLAQVS 114
LKE TE F ++G G++G VY G+ K AIK+L + P ++E L +
Sbjct: 16 LKE-TE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 73
Query: 115 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 174
+++ + + + +LLG C+ T + L + G L D + K G+Q +L+W
Sbjct: 74 VMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQY--LLNW---- 126
Query: 175 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADF 218
V AKG+ YL ++ ++HRD+ + NVL+ KI DF
Sbjct: 127 --CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDF 165
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 78/159 (49%), Gaps = 19/159 (11%)
Query: 75 IGEGSYGRV---YYGILK--SGHAAAIKKLDASKQPD-EEFLAQVSMVSRLKHENFVQLL 128
+G+G++G V Y L+ +G A+KKL S + +F ++ ++ L+H+N V+
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 81
Query: 129 GYCVDGTSR--VLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEY 186
G C R L E+ GSL D L K + +L + ++ KG+EY
Sbjct: 82 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQI------CKGMEY 133
Query: 187 LHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAP 225
L K IHRD+ + N+L+ +++ KI DF L+ P
Sbjct: 134 LGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLP 169
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 92/193 (47%), Gaps = 36/193 (18%)
Query: 73 ALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQPDEEF----LAQVSMVSRLKHENFVQL 127
A IG+G++G V+ K+G A+KK+ + E F L ++ ++ LKHEN V L
Sbjct: 24 AKIGQGTFGEVFKARHRKTGQKVALKKVLMENE-KEGFPITALREIKILQLLKHENVVNL 82
Query: 128 LGYCVDGTSRV--------LAYEFASN---GSLHDILHGRKGVKGAQPGPVLSWQQRVKI 176
+ C S L ++F + G L ++L VK LS +RV
Sbjct: 83 IEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVL-----VKFT-----LSEIKRVMQ 132
Query: 177 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS---NQAPDMAARLHS 233
+ GL Y+H I+HRD+K++NVLI D V K+ADF L+ + A + +
Sbjct: 133 ML--LNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYX 187
Query: 234 TRVLGTFGYHAPE 246
RV+ T Y PE
Sbjct: 188 NRVV-TLWYRPPE 199
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 82/164 (50%), Gaps = 21/164 (12%)
Query: 62 LKEITENFGTNALIGEGSYGRVYYGIL-----KSGHAAAIKKLDASKQP--DEEFLAQVS 114
LKE TE F ++G G++G VY G+ K AIK+L + P ++E L +
Sbjct: 14 LKE-TE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 115 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 174
+++ + + + +LLG C+ T + L + G L D + K G+Q +L+W
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQY--LLNW---- 124
Query: 175 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADF 218
V AKG+ YL ++ ++HRD+ + NVL+ KI DF
Sbjct: 125 --CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDF 163
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 82/164 (50%), Gaps = 21/164 (12%)
Query: 62 LKEITENFGTNALIGEGSYGRVYYGIL-----KSGHAAAIKKLDASKQP--DEEFLAQVS 114
LKE TE F ++G G++G VY G+ K AIK+L + P ++E L +
Sbjct: 14 LKE-TE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 115 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 174
+++ + + + +LLG C+ T + L + G L D + K G+Q +L+W
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQY--LLNW---- 124
Query: 175 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADF 218
V AKG+ YL ++ ++HRD+ + NVL+ KI DF
Sbjct: 125 --CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDF 163
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 83/186 (44%), Gaps = 21/186 (11%)
Query: 67 ENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQPD---EEFLAQVSMVSRLKHE 122
ENF IGEG+YG VY K +G A+KK+ + + + ++S++ L H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 123 NFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQ--PGPVLSWQQRVKIAVGA 180
N V+LL L +EF LH L P P++
Sbjct: 67 NIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK-----SYLFQL 116
Query: 181 AKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTF 240
+GL + H ++HRD+K N+LI + K+ADF L+ +A + R ++ V+ T
Sbjct: 117 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEVV-TL 171
Query: 241 GYHAPE 246
Y APE
Sbjct: 172 WYRAPE 177
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 78/159 (49%), Gaps = 19/159 (11%)
Query: 75 IGEGSYGRV---YYGILK--SGHAAAIKKLDASKQPD-EEFLAQVSMVSRLKHENFVQLL 128
+G+G++G V Y L+ +G A+KKL S + +F ++ ++ L+H+N V+
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 129 GYCVDGTSR--VLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEY 186
G C R L EF GSL + L K + +L + ++ KG+EY
Sbjct: 81 GVCYSAGRRNLKLIMEFLPYGSLREYLQKHK--ERIDHIKLLQYTSQI------CKGMEY 132
Query: 187 LHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAP 225
L K IHRD+ + N+L+ +++ KI DF L+ P
Sbjct: 133 LGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLP 168
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 83/186 (44%), Gaps = 21/186 (11%)
Query: 67 ENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQPD---EEFLAQVSMVSRLKHE 122
ENF IGEG+YG VY K +G A+KK+ + + + ++S++ L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 123 NFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQ--PGPVLSWQQRVKIAVGA 180
N V+LL L +EF LH L P P++
Sbjct: 63 NIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK-----SYLFQL 112
Query: 181 AKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTF 240
+GL + H ++HRD+K N+LI + K+ADF L+ +A + R ++ V+ T
Sbjct: 113 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEVV-TL 167
Query: 241 GYHAPE 246
Y APE
Sbjct: 168 WYRAPE 173
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 80/162 (49%), Gaps = 19/162 (11%)
Query: 68 NFGTNALIGEGSYGRVYYGIL-----KSGHAAAIKKLDASKQP--DEEFLAQVSMVSRLK 120
F ++G G++G VY G+ K AIK+L + P ++E L + +++ +
Sbjct: 13 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 72
Query: 121 HENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGA 180
+ + +LLG C+ T +++ + G L D + K G+Q +L+W V
Sbjct: 73 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQY--LLNW------CVQI 123
Query: 181 AKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSN 222
A+G+ YL ++ ++HRD+ + NVL+ KI DF L+
Sbjct: 124 AEGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 162
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 81/177 (45%), Gaps = 21/177 (11%)
Query: 75 IGEGSYGRVYYGILKSGHAAAIKKLDASKQPD---EEFLAQVSMVSRLKHENFVQLLGYC 131
IGEG+YG VY G A+KK+ K+ + + ++S++ LKH N V+L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 132 VDGTSRVLAYEFASN--GSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHE 189
VL +E L D+ G G++ L + G+ Y H
Sbjct: 70 HTKKRLVLVFEHLDQDLKKLLDVCEG--GLESVTAKSFL---------LQLLNGIAYCH- 117
Query: 190 KADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
D ++HRD+K N+LI + KIADF L+ +A + R ++ ++ T Y AP+
Sbjct: 118 --DRRVLHRDLKPQNLLINREGELKIADFGLA-RAFGIPVRKYTHEIV-TLWYRAPD 170
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 92/193 (47%), Gaps = 36/193 (18%)
Query: 73 ALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQPDEEF----LAQVSMVSRLKHENFVQL 127
A IG+G++G V+ K+G A+KK+ + E F L ++ ++ LKHEN V L
Sbjct: 23 AKIGQGTFGEVFKARHRKTGQKVALKKVLMENE-KEGFPITALREIKILQLLKHENVVNL 81
Query: 128 LGYCVDGTSRV--------LAYEFASN---GSLHDILHGRKGVKGAQPGPVLSWQQRVKI 176
+ C S L ++F + G L ++L VK LS +RV
Sbjct: 82 IEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL-----VKFT-----LSEIKRVMQ 131
Query: 177 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS---NQAPDMAARLHS 233
+ GL Y+H I+HRD+K++NVLI D V K+ADF L+ + A + +
Sbjct: 132 ML--LNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYX 186
Query: 234 TRVLGTFGYHAPE 246
RV+ T Y PE
Sbjct: 187 NRVV-TLWYRPPE 198
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 92/193 (47%), Gaps = 36/193 (18%)
Query: 73 ALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQPDEEF----LAQVSMVSRLKHENFVQL 127
A IG+G++G V+ K+G A+KK+ + E F L ++ ++ LKHEN V L
Sbjct: 24 AKIGQGTFGEVFKARHRKTGQKVALKKVLMENE-KEGFPITALREIKILQLLKHENVVNL 82
Query: 128 LGYCVDGTSRV--------LAYEFASN---GSLHDILHGRKGVKGAQPGPVLSWQQRVKI 176
+ C S L ++F + G L ++L VK LS +RV
Sbjct: 83 IEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL-----VKFT-----LSEIKRVMQ 132
Query: 177 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS---NQAPDMAARLHS 233
+ GL Y+H I+HRD+K++NVLI D V K+ADF L+ + A + +
Sbjct: 133 ML--LNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYX 187
Query: 234 TRVLGTFGYHAPE 246
RV+ T Y PE
Sbjct: 188 NRVV-TLWYRPPE 199
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 75/158 (47%), Gaps = 16/158 (10%)
Query: 65 ITENFGTNALIGEGSYGRVYYGILK-SGHAAAIKK-LDASKQP--DEEFLAQVSMVSRLK 120
+ E + IGEGSYG V+ + +G AIKK L++ P + L ++ M+ +LK
Sbjct: 1 MMEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLK 60
Query: 121 HENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGA 180
H N V LL L +E+ + LH++ ++GV + +WQ
Sbjct: 61 HPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSI-TWQ--------T 111
Query: 181 AKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADF 218
+ + + H+ + IHRD+K N+LI V K+ DF
Sbjct: 112 LQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDF 146
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 91/187 (48%), Gaps = 30/187 (16%)
Query: 75 IGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCV-D 133
+G+G YG V+ G L G + A+K + + ++ L+H+N +LG+ D
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIFSSRDEQSWFRETEIYNTVLLRHDN---ILGFIASD 71
Query: 134 GTSR------VLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYL 187
TSR L + +GSL+D L R+ ++ P L+ +++AV AA GL +L
Sbjct: 72 MTSRNSSTQLWLITHYHEHGSLYDFLQ-RQTLE-----PHLA----LRLAVSAACGLAHL 121
Query: 188 H-----EKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS---NQAPDMAARLHSTRVLGT 239
H + P I HRD KS NVL+ + IAD L+ +Q D ++ RV GT
Sbjct: 122 HVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRV-GT 180
Query: 240 FGYHAPE 246
Y APE
Sbjct: 181 KRYMAPE 187
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 83/174 (47%), Gaps = 21/174 (12%)
Query: 56 AISVDELKEITENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQPD---EEFLA 111
A S DE I N+ IG+G++ +V + +G A+K +D ++ ++
Sbjct: 4 ATSADEQPHIG-NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR 62
Query: 112 QVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDIL--HGRKGVKGAQPGPVLS 169
+V + L H N V+L + L E+AS G + D L HGR K A+
Sbjct: 63 EVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARA----K 118
Query: 170 WQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQ 223
++Q V ++Y H+K I+HRD+K+ N+L+ D KIADF SN+
Sbjct: 119 FRQIVS-------AVQYCHQK---FIVHRDLKAENLLLDADXNIKIADFGFSNE 162
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 79/173 (45%), Gaps = 16/173 (9%)
Query: 60 DELKEITENFGTNALIGEGSYGRVYYGILK------SGHAAAIKKLD--ASKQPDEEFLA 111
DE + E + +G+GS+G VY G+ K AIK ++ AS + EFL
Sbjct: 5 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 64
Query: 112 QVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVL--- 168
+ S++ + V+LLG G ++ E + G L L + + PVL
Sbjct: 65 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLR--PEMENNPVLAPP 122
Query: 169 SWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 221
S + +++A A G+ YL+ +HRD+ + N + +D KI DF ++
Sbjct: 123 SLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMT 172
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 84/184 (45%), Gaps = 17/184 (9%)
Query: 67 ENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQPD---EEFLAQVSMVSRLKHE 122
ENF IGEG+YG VY K +G A+KK+ + + + ++S++ L H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 123 NFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAK 182
N V+LL L +EF S L + + G P P++ +
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFLSM-DLKKFMDA-SALTGI-PLPLIK-----SYLFQLLQ 117
Query: 183 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 242
GL + H ++HRD+K N+LI + K+ADF L+ +A + R + V+ T Y
Sbjct: 118 GLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVV-TLWY 172
Query: 243 HAPE 246
APE
Sbjct: 173 RAPE 176
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 84/184 (45%), Gaps = 17/184 (9%)
Query: 67 ENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQPD---EEFLAQVSMVSRLKHE 122
ENF IGEG+YG VY K +G A+KK+ + + + ++S++ L H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 123 NFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAK 182
N V+LL L +EF S L + + G P P++ +
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLSM-DLKKFMDA-SALTGI-PLPLIK-----SYLFQLLQ 115
Query: 183 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 242
GL + H ++HRD+K N+LI + K+ADF L+ +A + R + V+ T Y
Sbjct: 116 GLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVV-TLWY 170
Query: 243 HAPE 246
APE
Sbjct: 171 RAPE 174
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 87/187 (46%), Gaps = 21/187 (11%)
Query: 65 ITENFGTNALIGEGSYGRVYYGILKSGHAAAIKK--LDASKQ--PDEEFLAQVSMVSRLK 120
+ E + +GEG+YG VY G A+K+ LDA + P + ++S++ L
Sbjct: 19 LMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTA-IREISLLKELH 77
Query: 121 HENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAV-G 179
H N V L+ L +EF + + G++ +Q +KI +
Sbjct: 78 HPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQ----------IKIYLYQ 127
Query: 180 AAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGT 239
+G+ + H+ I+HRD+K N+LI D K+ADF L+ +A + R ++ V+ T
Sbjct: 128 LLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLA-RAFGIPVRSYTHEVV-T 182
Query: 240 FGYHAPE 246
Y AP+
Sbjct: 183 LWYRAPD 189
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 79/162 (48%), Gaps = 19/162 (11%)
Query: 68 NFGTNALIGEGSYGRVYYGIL-----KSGHAAAIKKLDASKQP--DEEFLAQVSMVSRLK 120
F ++G G++G VY G+ K AI +L + P ++E L + +++ +
Sbjct: 50 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVD 109
Query: 121 HENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGA 180
+ + +LLG C+ T +++ + G L D + K G+Q +L+W V
Sbjct: 110 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQY--LLNW------CVQI 160
Query: 181 AKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSN 222
AKG+ YL ++ ++HRD+ + NVL+ KI DF L+
Sbjct: 161 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 199
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 86/174 (49%), Gaps = 15/174 (8%)
Query: 75 IGEGSYGRVYYGILKSGHA-AAIKKLDA-SKQPDEEFLAQVSMVSRLKHENFVQLLGYCV 132
+G+G++G+VY K AA K +D S++ E+++ ++ +++ H N V+LL
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 133 DGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKAD 192
+ + EF + G++ ++ ++ +P L+ Q + L YLH D
Sbjct: 105 YENNLWILIEFCAGGAVDAVM-----LELERP---LTESQIQVVCKQTLDALNYLH---D 153
Query: 193 PHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
IIHRD+K+ N+L D K+ADF +S + R S +GT + APE
Sbjct: 154 NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDS--FIGTPYWMAPE 205
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 82/186 (44%), Gaps = 21/186 (11%)
Query: 67 ENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQPD---EEFLAQVSMVSRLKHE 122
ENF IGEG+YG VY K +G A+KK+ + + + ++S++ L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 123 NFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQ--PGPVLSWQQRVKIAVGA 180
N V+LL L +EF LH L P P++
Sbjct: 63 NIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK-----SYLFQL 112
Query: 181 AKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTF 240
+GL + H ++HRD+K N+LI + K+ADF L+ +A + R + V+ T
Sbjct: 113 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVV-TL 167
Query: 241 GYHAPE 246
Y APE
Sbjct: 168 WYRAPE 173
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 82/186 (44%), Gaps = 21/186 (11%)
Query: 67 ENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQPD---EEFLAQVSMVSRLKHE 122
ENF IGEG+YG VY K +G A+KK+ + + + ++S++ L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 123 NFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQ--PGPVLSWQQRVKIAVGA 180
N V+LL L +EF LH L P P++
Sbjct: 63 NIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK-----SYLFQL 112
Query: 181 AKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTF 240
+GL + H ++HRD+K N+LI + K+ADF L+ +A + R + V+ T
Sbjct: 113 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVV-TL 167
Query: 241 GYHAPE 246
Y APE
Sbjct: 168 WYRAPE 173
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 82/186 (44%), Gaps = 21/186 (11%)
Query: 67 ENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQPD---EEFLAQVSMVSRLKHE 122
ENF IGEG+YG VY K +G A+KK+ + + + ++S++ L H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 123 NFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQ--PGPVLSWQQRVKIAVGA 180
N V+LL L +EF LH L P P++
Sbjct: 66 NIVKLLDVIHTENKLYLVFEF-----LHQDLKTFMDASALTGIPLPLIK-----SYLFQL 115
Query: 181 AKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTF 240
+GL + H ++HRD+K N+LI + K+ADF L+ +A + R + V+ T
Sbjct: 116 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVV-TL 170
Query: 241 GYHAPE 246
Y APE
Sbjct: 171 WYRAPE 176
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 82/186 (44%), Gaps = 21/186 (11%)
Query: 67 ENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQPD---EEFLAQVSMVSRLKHE 122
ENF IGEG+YG VY K +G A+KK+ + + + ++S++ L H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 123 NFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQ--PGPVLSWQQRVKIAVGA 180
N V+LL L +EF LH L P P++
Sbjct: 64 NIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK-----SYLFQL 113
Query: 181 AKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTF 240
+GL + H ++HRD+K N+LI + K+ADF L+ +A + R + V+ T
Sbjct: 114 LQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVV-TL 168
Query: 241 GYHAPE 246
Y APE
Sbjct: 169 WYRAPE 174
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 82/186 (44%), Gaps = 21/186 (11%)
Query: 67 ENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQPD---EEFLAQVSMVSRLKHE 122
ENF IGEG+YG VY K +G A+KK+ + + + ++S++ L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 123 NFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQ--PGPVLSWQQRVKIAVGA 180
N V+LL L +EF LH L P P++
Sbjct: 63 NIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK-----SYLFQL 112
Query: 181 AKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTF 240
+GL + H ++HRD+K N+LI + K+ADF L+ +A + R + V+ T
Sbjct: 113 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVV-TL 167
Query: 241 GYHAPE 246
Y APE
Sbjct: 168 WYRAPE 173
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 79/161 (49%), Gaps = 19/161 (11%)
Query: 69 FGTNALIGEGSYGRVYYGIL-----KSGHAAAIKKLDASKQP--DEEFLAQVSMVSRLKH 121
F ++ G++G VY G+ K AIK+L + P ++E L + +++ + +
Sbjct: 17 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAA 181
+ +LLG C+ T +++ + G L D + K G+Q +L+W V A
Sbjct: 77 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQY--LLNW------CVQIA 127
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSN 222
KG+ YL ++ ++HRD+ + NVL+ KI DF L+
Sbjct: 128 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 165
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 84/174 (48%), Gaps = 21/174 (12%)
Query: 56 AISVDELKEITENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQPD---EEFLA 111
A S DE I N+ IG+G++ +V + +G A++ +D ++ ++
Sbjct: 4 ATSADEQPHIG-NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFR 62
Query: 112 QVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDIL--HGRKGVKGAQPGPVLS 169
+V ++ L H N V+L + L E+AS G + D L HGR K A+
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA----K 118
Query: 170 WQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQ 223
++Q V ++Y H+K I+HRD+K+ N+L+ D KIADF SN+
Sbjct: 119 FRQIVS-------AVQYCHQK---FIVHRDLKAENLLLDADMNIKIADFGFSNE 162
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 82/186 (44%), Gaps = 21/186 (11%)
Query: 67 ENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQPD---EEFLAQVSMVSRLKHE 122
ENF IGEG+YG VY K +G A+KK+ + + + ++S++ L H
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 123 NFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQ--PGPVLSWQQRVKIAVGA 180
N V+LL L +EF LH L P P++
Sbjct: 65 NIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK-----SYLFQL 114
Query: 181 AKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTF 240
+GL + H ++HRD+K N+LI + K+ADF L+ +A + R + V+ T
Sbjct: 115 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVV-TL 169
Query: 241 GYHAPE 246
Y APE
Sbjct: 170 WYRAPE 175
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 82/186 (44%), Gaps = 21/186 (11%)
Query: 67 ENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQPD---EEFLAQVSMVSRLKHE 122
ENF IGEG+YG VY K +G A+KK+ + + + ++S++ L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 123 NFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQ--PGPVLSWQQRVKIAVGA 180
N V+LL L +EF LH L P P++
Sbjct: 62 NIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK-----SYLFQL 111
Query: 181 AKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTF 240
+GL + H ++HRD+K N+LI + K+ADF L+ +A + R + V+ T
Sbjct: 112 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVV-TL 166
Query: 241 GYHAPE 246
Y APE
Sbjct: 167 WYRAPE 172
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 82/186 (44%), Gaps = 21/186 (11%)
Query: 67 ENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQPD---EEFLAQVSMVSRLKHE 122
ENF IGEG+YG VY K +G A+KK+ + + + ++S++ L H
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 123 NFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQ--PGPVLSWQQRVKIAVGA 180
N V+LL L +EF LH L P P++
Sbjct: 65 NIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK-----SYLFQL 114
Query: 181 AKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTF 240
+GL + H ++HRD+K N+LI + K+ADF L+ +A + R + V+ T
Sbjct: 115 LQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVV-TL 169
Query: 241 GYHAPE 246
Y APE
Sbjct: 170 WYRAPE 175
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 82/186 (44%), Gaps = 21/186 (11%)
Query: 67 ENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQPD---EEFLAQVSMVSRLKHE 122
ENF IGEG+YG VY K +G A+KK+ + + + ++S++ L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 123 NFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQ--PGPVLSWQQRVKIAVGA 180
N V+LL L +EF LH L P P++
Sbjct: 62 NIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK-----SYLFQL 111
Query: 181 AKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTF 240
+GL + H ++HRD+K N+LI + K+ADF L+ +A + R + V+ T
Sbjct: 112 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVV-TL 166
Query: 241 GYHAPE 246
Y APE
Sbjct: 167 WYRAPE 172
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 82/186 (44%), Gaps = 21/186 (11%)
Query: 67 ENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQPD---EEFLAQVSMVSRLKHE 122
ENF IGEG+YG VY K +G A+KK+ + + + ++S++ L H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 123 NFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQ--PGPVLSWQQRVKIAVGA 180
N V+LL L +EF LH L P P++
Sbjct: 64 NIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK-----SYLFQL 113
Query: 181 AKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTF 240
+GL + H ++HRD+K N+LI + K+ADF L+ +A + R + V+ T
Sbjct: 114 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVV-TL 168
Query: 241 GYHAPE 246
Y APE
Sbjct: 169 WYRAPE 174
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 84/168 (50%), Gaps = 21/168 (12%)
Query: 62 LKEITENFGTNALIGEGSYGRVYYGIL-----KSGHAAAIKKLDASKQP--DEEFLAQVS 114
LKE TE F ++ G++G VY G+ K AIK+L + P ++E L +
Sbjct: 19 LKE-TE-FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 76
Query: 115 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 174
+++ + + + +LLG C+ T +++ + G L D + K G+Q +L+W
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQY--LLNW---- 129
Query: 175 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSN 222
V AKG+ YL ++ ++HRD+ + NVL+ KI DF L+
Sbjct: 130 --CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 172
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 86/174 (49%), Gaps = 15/174 (8%)
Query: 75 IGEGSYGRVYYGILKSGHA-AAIKKLDA-SKQPDEEFLAQVSMVSRLKHENFVQLLGYCV 132
+G+G++G+VY K AA K +D S++ E+++ ++ +++ H N V+LL
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 133 DGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKAD 192
+ + EF + G++ ++ ++ +P L+ Q + L YLH D
Sbjct: 105 YENNLWILIEFCAGGAVDAVM-----LELERP---LTESQIQVVCKQTLDALNYLH---D 153
Query: 193 PHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
IIHRD+K+ N+L D K+ADF +S + R S +GT + APE
Sbjct: 154 NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDS--FIGTPYWMAPE 205
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 82/186 (44%), Gaps = 21/186 (11%)
Query: 67 ENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQPD---EEFLAQVSMVSRLKHE 122
ENF IGEG+YG VY K +G A+KK+ + + + ++S++ L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 123 NFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQ--PGPVLSWQQRVKIAVGA 180
N V+LL L +EF LH L P P++
Sbjct: 63 NIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK-----SYLFQL 112
Query: 181 AKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTF 240
+GL + H ++HRD+K N+LI + K+ADF L+ +A + R + V+ T
Sbjct: 113 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVV-TL 167
Query: 241 GYHAPE 246
Y APE
Sbjct: 168 WYRAPE 173
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 84/174 (48%), Gaps = 21/174 (12%)
Query: 56 AISVDELKEITENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQPD---EEFLA 111
A S DE I N+ IG+G++ +V + +G A++ +D ++ ++
Sbjct: 4 ATSADEQPHIG-NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFR 62
Query: 112 QVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDIL--HGRKGVKGAQPGPVLS 169
+V ++ L H N V+L + L E+AS G + D L HGR K A+
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA----K 118
Query: 170 WQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQ 223
++Q V ++Y H+K I+HRD+K+ N+L+ D KIADF SN+
Sbjct: 119 FRQIVS-------AVQYCHQK---FIVHRDLKAENLLLDADMNIKIADFGFSNE 162
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 82/186 (44%), Gaps = 21/186 (11%)
Query: 67 ENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQPD---EEFLAQVSMVSRLKHE 122
ENF IGEG+YG VY K +G A+KK+ + + + ++S++ L H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 123 NFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQ--PGPVLSWQQRVKIAVGA 180
N V+LL L +EF LH L P P++
Sbjct: 66 NIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK-----SYLFQL 115
Query: 181 AKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTF 240
+GL + H ++HRD+K N+LI + K+ADF L+ +A + R + V+ T
Sbjct: 116 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVV-TL 170
Query: 241 GYHAPE 246
Y APE
Sbjct: 171 WYRAPE 176
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 82/186 (44%), Gaps = 21/186 (11%)
Query: 67 ENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQPD---EEFLAQVSMVSRLKHE 122
ENF IGEG+YG VY K +G A+KK+ + + + ++S++ L H
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 123 NFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQ--PGPVLSWQQRVKIAVGA 180
N V+LL L +EF LH L P P++
Sbjct: 65 NIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK-----SYLFQL 114
Query: 181 AKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTF 240
+GL + H ++HRD+K N+LI + K+ADF L+ +A + R + V+ T
Sbjct: 115 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVV-TL 169
Query: 241 GYHAPE 246
Y APE
Sbjct: 170 WYRAPE 175
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 77/168 (45%), Gaps = 17/168 (10%)
Query: 56 AISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEE---FLAQ 112
+I + E E LIG+G +G+VY+G + AI+ +D + +++ F +
Sbjct: 22 SIFLQEWDIPFEQLEIGELIGKGRFGQVYHG--RWHGEVAIRLIDIERDNEDQLKAFKRE 79
Query: 113 VSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQ 172
V + +HEN V +G C+ + +L+ ++ K VL +
Sbjct: 80 VMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAK--------IVLDVNK 131
Query: 173 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDL 220
+IA KG+ YLH K I+H+D+KS NV +D+ I DF L
Sbjct: 132 TRQIAQEIVKGMGYLHAKG---ILHKDLKSKNVF-YDNGKVVITDFGL 175
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 78/161 (48%), Gaps = 24/161 (14%)
Query: 75 IGEGSYGRVYYGIL--KSGHAAAIK----KLDASKQPD--EEFLAQVSMVSRLKHENFVQ 126
+G+GS+G V G SG ++ K D QP+ ++F+ +V+ + L H N ++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 127 LLGYCVDGTSRVLAYEFASNGSLHDILHGRKG--VKGAQPGPVLSWQQRVKIAVGAAKGL 184
L G + +++ E A GSL D L +G + G LS + AV A+G+
Sbjct: 86 LYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLGT-----LS-----RYAVQVAEGM 134
Query: 185 EYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAP 225
YL K IHRD+ + N+L+ D+ KI DF L P
Sbjct: 135 GYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALP 172
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 82/186 (44%), Gaps = 21/186 (11%)
Query: 67 ENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQPD---EEFLAQVSMVSRLKHE 122
ENF IGEG+YG VY K +G A+KK+ + + + ++S++ L H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 123 NFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQ--PGPVLSWQQRVKIAVGA 180
N V+LL L +EF LH L P P++
Sbjct: 66 NIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK-----SYLFQL 115
Query: 181 AKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTF 240
+GL + H ++HRD+K N+LI + K+ADF L+ +A + R + V+ T
Sbjct: 116 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVV-TL 170
Query: 241 GYHAPE 246
Y APE
Sbjct: 171 WYRAPE 176
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 82/186 (44%), Gaps = 21/186 (11%)
Query: 67 ENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQPD---EEFLAQVSMVSRLKHE 122
ENF IGEG+YG VY K +G A+KK+ + + + ++S++ L H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 123 NFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQ--PGPVLSWQQRVKIAVGA 180
N V+LL L +EF LH L P P++
Sbjct: 67 NIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK-----SYLFQL 116
Query: 181 AKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTF 240
+GL + H ++HRD+K N+LI + K+ADF L+ +A + R + V+ T
Sbjct: 117 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVV-TL 171
Query: 241 GYHAPE 246
Y APE
Sbjct: 172 WYRAPE 177
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 83/168 (49%), Gaps = 21/168 (12%)
Query: 62 LKEITENFGTNALIGEGSYGRVYYGIL-----KSGHAAAIKKLDASKQP--DEEFLAQVS 114
LKE TE F ++ G++G VY G+ K AIK+L + P ++E L +
Sbjct: 19 LKE-TE-FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 76
Query: 115 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 174
+++ + + + +LLG C+ T + L + G L D + K G+Q +L+W
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQY--LLNW---- 129
Query: 175 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSN 222
V AKG+ YL ++ ++HRD+ + NVL+ KI DF L+
Sbjct: 130 --CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 172
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 87/187 (46%), Gaps = 21/187 (11%)
Query: 65 ITENFGTNALIGEGSYGRVYYGILKSGHAAAIKK--LDASKQ--PDEEFLAQVSMVSRLK 120
+ E + +GEG+YG VY G A+K+ LDA + P + ++S++ L
Sbjct: 19 LMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTA-IREISLLKELH 77
Query: 121 HENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAV-G 179
H N V L+ L +EF + + G++ +Q +KI +
Sbjct: 78 HPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQ----------IKIYLYQ 127
Query: 180 AAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGT 239
+G+ + H+ I+HRD+K N+LI D K+ADF L+ +A + R ++ V+ T
Sbjct: 128 LLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLA-RAFGIPVRSYTHEVV-T 182
Query: 240 FGYHAPE 246
Y AP+
Sbjct: 183 LWYRAPD 189
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 82/186 (44%), Gaps = 21/186 (11%)
Query: 67 ENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQPD---EEFLAQVSMVSRLKHE 122
ENF IGEG+YG VY K +G A+KK+ + + + ++S++ L H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 123 NFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQ--PGPVLSWQQRVKIAVGA 180
N V+LL L +EF LH L P P++
Sbjct: 64 NIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK-----SYLFQL 113
Query: 181 AKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTF 240
+GL + H ++HRD+K N+LI + K+ADF L+ +A + R + V+ T
Sbjct: 114 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVV-TL 168
Query: 241 GYHAPE 246
Y APE
Sbjct: 169 WYRAPE 174
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 78/161 (48%), Gaps = 24/161 (14%)
Query: 75 IGEGSYGRVYYGIL--KSGHAAAIK----KLDASKQPD--EEFLAQVSMVSRLKHENFVQ 126
+G+GS+G V G SG ++ K D QP+ ++F+ +V+ + L H N ++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 127 LLGYCVDGTSRVLAYEFASNGSLHDILHGRKG--VKGAQPGPVLSWQQRVKIAVGAAKGL 184
L G + +++ E A GSL D L +G + G LS + AV A+G+
Sbjct: 80 LYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLGT-----LS-----RYAVQVAEGM 128
Query: 185 EYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAP 225
YL K IHRD+ + N+L+ D+ KI DF L P
Sbjct: 129 GYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALP 166
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 73/156 (46%), Gaps = 20/156 (12%)
Query: 75 IGEGSYGRVYYGIL-----KSGHAAAIKKLDASKQPDE--EFLAQVSMVSRLKHENFVQL 127
+GEG +G+V +G A+K L + + ++ ++ L HEN V+
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 128 LGYCVD--GTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLE 185
G C + G L EF +GSL + L K ++ +Q++K AV KG++
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNK--------INLKQQLKYAVQICKGMD 128
Query: 186 YLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 221
YL + +HRD+ + NVL+ + KI DF L+
Sbjct: 129 YLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLT 161
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 73/156 (46%), Gaps = 20/156 (12%)
Query: 75 IGEGSYGRVYYGIL-----KSGHAAAIKKLDASKQPDE--EFLAQVSMVSRLKHENFVQL 127
+GEG +G+V +G A+K L + + ++ ++ L HEN V+
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 128 LGYCVD--GTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLE 185
G C + G L EF +GSL + L K ++ +Q++K AV KG++
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNK--------INLKQQLKYAVQICKGMD 140
Query: 186 YLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 221
YL + +HRD+ + NVL+ + KI DF L+
Sbjct: 141 YLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLT 173
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 62/140 (44%), Gaps = 22/140 (15%)
Query: 119 LKHENFVQLLGYCVDGTSR----VLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 174
+KHEN +Q + G++ L F GSL D L G +++W +
Sbjct: 66 MKHENLLQFIAAEKRGSNLEVELWLITAFHDKGSLTDYLKGN----------IITWNELC 115
Query: 175 KIAVGAAKGLEYLHEKA--------DPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
+A ++GL YLHE P I HRD KS NVL+ D A +ADF L+ +
Sbjct: 116 HVAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEP 175
Query: 227 MAARLHSTRVLGTFGYHAPE 246
+ +GT Y APE
Sbjct: 176 GKPPGDTHGQVGTRRYMAPE 195
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 78/161 (48%), Gaps = 24/161 (14%)
Query: 75 IGEGSYGRVYYGIL--KSGHAAAIK----KLDASKQPD--EEFLAQVSMVSRLKHENFVQ 126
+G+GS+G V G SG ++ K D QP+ ++F+ +V+ + L H N ++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 127 LLGYCVDGTSRVLAYEFASNGSLHDILHGRKG--VKGAQPGPVLSWQQRVKIAVGAAKGL 184
L G + +++ E A GSL D L +G + G LS + AV A+G+
Sbjct: 86 LYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLGT-----LS-----RYAVQVAEGM 134
Query: 185 EYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAP 225
YL K IHRD+ + N+L+ D+ KI DF L P
Sbjct: 135 GYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALP 172
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 86/179 (48%), Gaps = 20/179 (11%)
Query: 75 IGEGSYGRVYYGILKSGH-----AAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLG 129
+G G++G V G+ + A + K K EE + + ++ +L + V+L+G
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 130 YCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHE 189
C + +L E A G LH L G++ + PV ++ + G++YL E
Sbjct: 78 VC-QAEALMLVMEMAGGGPLHKFLVGKR-----EEIPV---SNVAELLHQVSMGMKYLEE 128
Query: 190 KADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTF--GYHAPE 246
K + +HRD+ + NVL+ + AKI+DF LS +A ++ R G + ++APE
Sbjct: 129 K---NFVHRDLAARNVLLVNRHYAKISDFGLS-KALGADDSYYTARSAGKWPLKWYAPE 183
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 78/161 (48%), Gaps = 24/161 (14%)
Query: 75 IGEGSYGRVYYGIL--KSGHAAAIK----KLDASKQPD--EEFLAQVSMVSRLKHENFVQ 126
+G+GS+G V G SG ++ K D QP+ ++F+ +V+ + L H N ++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 127 LLGYCVDGTSRVLAYEFASNGSLHDILHGRKG--VKGAQPGPVLSWQQRVKIAVGAAKGL 184
L G + +++ E A GSL D L +G + G LS + AV A+G+
Sbjct: 76 LYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLGT-----LS-----RYAVQVAEGM 124
Query: 185 EYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAP 225
YL K IHRD+ + N+L+ D+ KI DF L P
Sbjct: 125 GYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALP 162
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 78/161 (48%), Gaps = 24/161 (14%)
Query: 75 IGEGSYGRVYYGIL--KSGHAAAIK----KLDASKQPD--EEFLAQVSMVSRLKHENFVQ 126
+G+GS+G V G SG ++ K D QP+ ++F+ +V+ + L H N ++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 127 LLGYCVDGTSRVLAYEFASNGSLHDILHGRKG--VKGAQPGPVLSWQQRVKIAVGAAKGL 184
L G + +++ E A GSL D L +G + G LS + AV A+G+
Sbjct: 76 LYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLGT-----LS-----RYAVQVAEGM 124
Query: 185 EYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAP 225
YL K IHRD+ + N+L+ D+ KI DF L P
Sbjct: 125 GYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALP 162
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 68/158 (43%), Gaps = 18/158 (11%)
Query: 75 IGEGSYGRVYYGILKS----GHAAAIK--KLDASKQPDEEFLAQVSMVSRLKHENFVQLL 128
IGEG +G V+ GI S A AIK K S E+FL + + + H + V+L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 129 GYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLH 188
G + ++ E + G L L RK L + A + L YL
Sbjct: 78 GVITENPVWIIM-ELCTLGELRSFLQVRKFS--------LDLASLILYAYQLSTALAYLE 128
Query: 189 EKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
K +HRDI + NVL+ +D K+ DF LS D
Sbjct: 129 SK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 163
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 78/161 (48%), Gaps = 24/161 (14%)
Query: 75 IGEGSYGRVYYGIL--KSGHAAAIK----KLDASKQPD--EEFLAQVSMVSRLKHENFVQ 126
+G+GS+G V G SG ++ K D QP+ ++F+ +V+ + L H N ++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 127 LLGYCVDGTSRVLAYEFASNGSLHDILHGRKG--VKGAQPGPVLSWQQRVKIAVGAAKGL 184
L G + +++ E A GSL D L +G + G LS + AV A+G+
Sbjct: 80 LYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLGT-----LS-----RYAVQVAEGM 128
Query: 185 EYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAP 225
YL K IHRD+ + N+L+ D+ KI DF L P
Sbjct: 129 GYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALP 166
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 81/187 (43%), Gaps = 26/187 (13%)
Query: 67 ENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVS-------MVSRL 119
++F +G GS+GRV+ +++S H + K+ L QV M+S +
Sbjct: 6 QDFQILRTLGTGSFGRVH--LIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV 63
Query: 120 KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVG 179
H +++ G D + ++ G L +L RK + P PV + A
Sbjct: 64 THPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLL--RKSQRF--PNPVAKF-----YAAE 114
Query: 180 AAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGT 239
LEYLH K II+RD+K N+L+ + KI DF + PD+ L GT
Sbjct: 115 VCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYXL-----CGT 166
Query: 240 FGYHAPE 246
Y APE
Sbjct: 167 PDYIAPE 173
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 68/158 (43%), Gaps = 18/158 (11%)
Query: 75 IGEGSYGRVYYGILKSGH----AAAIK--KLDASKQPDEEFLAQVSMVSRLKHENFVQLL 128
IGEG +G V+ GI S A AIK K S E+FL + + + H + V+L+
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 129 GYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLH 188
G + ++ E + G L L RK L + A + L YL
Sbjct: 106 GVITENPVWIIM-ELCTLGELRSFLQVRKYS--------LDLASLILYAYQLSTALAYLE 156
Query: 189 EKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
K +HRDI + NVL+ +D K+ DF LS D
Sbjct: 157 SK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 191
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 68/158 (43%), Gaps = 18/158 (11%)
Query: 75 IGEGSYGRVYYGILKS----GHAAAIK--KLDASKQPDEEFLAQVSMVSRLKHENFVQLL 128
IGEG +G V+ GI S A AIK K S E+FL + + + H + V+L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 129 GYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLH 188
G + ++ E + G L L RK L + A + L YL
Sbjct: 78 GVITENPVWIIM-ELCTLGELRSFLQVRKYS--------LDLASLILYAYQLSTALAYLE 128
Query: 189 EKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
K +HRDI + NVL+ +D K+ DF LS D
Sbjct: 129 SK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 163
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 82/184 (44%), Gaps = 26/184 (14%)
Query: 60 DELKEITEN-------FGTNALIGEGSYGRVYYGILKSGHAAAIK------KLDASKQPD 106
DELKE E+ F ++G+G +G V LK + +K K D D
Sbjct: 9 DELKEKLEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSD 68
Query: 107 -EEFLAQVSMVSRLKHENFVQLLGYCVDGTSR------VLAYEFASNGSLHDILHGRKGV 159
EEFL + + + H + +L+G + ++ ++ F +G LH L +
Sbjct: 69 IEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASR-- 126
Query: 160 KGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFD 219
G P L Q V+ V A G+EYL + + IHRD+ + N ++ +D +ADF
Sbjct: 127 IGENPFN-LPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCVADFG 182
Query: 220 LSNQ 223
LS +
Sbjct: 183 LSRK 186
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 77/159 (48%), Gaps = 19/159 (11%)
Query: 75 IGEGSYGRV---YYGILK--SGHAAAIKKLDASKQPD-EEFLAQVSMVSRLKHENFVQLL 128
+G+G++G V Y L+ +G A+KKL S + +F ++ ++ L+H+N V+
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 129 GYCVDGTSR--VLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEY 186
G C R L E+ GSL D L + +L + ++ KG+EY
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQAH--AERIDHIKLLQYTSQI------CKGMEY 132
Query: 187 LHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAP 225
L K IHRD+ + N+L+ +++ KI DF L+ P
Sbjct: 133 LGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLP 168
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 78/161 (48%), Gaps = 24/161 (14%)
Query: 75 IGEGSYGRVYYGIL--KSGHAAAIK----KLDASKQPD--EEFLAQVSMVSRLKHENFVQ 126
+G+GS+G V G SG ++ K D QP+ ++F+ +V+ + L H N ++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 127 LLGYCVDGTSRVLAYEFASNGSLHDILHGRKG--VKGAQPGPVLSWQQRVKIAVGAAKGL 184
L G + +++ E A GSL D L +G + G LS + AV A+G+
Sbjct: 76 LYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLGT-----LS-----RYAVQVAEGM 124
Query: 185 EYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAP 225
YL K IHRD+ + N+L+ D+ KI DF L P
Sbjct: 125 GYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALP 162
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 78/156 (50%), Gaps = 19/156 (12%)
Query: 74 LIGEGSYGRVYYGI-------LKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQ 126
++G G++G VY GI +K A + + + S + ++E L + +++ + +
Sbjct: 24 VLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSR 83
Query: 127 LLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEY 186
LLG C+ T + L + G L D + +G G+Q +L+W ++ AKG+ Y
Sbjct: 84 LLGICLTSTVQ-LVTQLMPYGCLLDHVRENRGRLGSQD--LLNWCMQI------AKGMSY 134
Query: 187 LHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSN 222
L D ++HRD+ + NVL+ + KI DF L+
Sbjct: 135 LE---DVRLVHRDLAARNVLVKSPNHVKITDFGLAR 167
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 68/158 (43%), Gaps = 18/158 (11%)
Query: 75 IGEGSYGRVYYGILKSGH----AAAIK--KLDASKQPDEEFLAQVSMVSRLKHENFVQLL 128
IGEG +G V+ GI S A AIK K S E+FL + + + H + V+L+
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 129 GYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLH 188
G + ++ E + G L L RK L + A + L YL
Sbjct: 80 GVITENPVWIIM-ELCTLGELRSFLQVRKYS--------LDLASLILYAYQLSTALAYLE 130
Query: 189 EKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
K +HRDI + NVL+ +D K+ DF LS D
Sbjct: 131 SK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 165
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 78/159 (49%), Gaps = 19/159 (11%)
Query: 75 IGEGSYGRV---YYGILK--SGHAAAIKKLDASKQPD-EEFLAQVSMVSRLKHENFVQLL 128
+G+G++G V Y L+ +G A+KKL S + +F ++ ++ L+H+N V+
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 78
Query: 129 GYCVDGTSR--VLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEY 186
G C R L E+ GSL D L K + +L + ++ KG+EY
Sbjct: 79 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQI------CKGMEY 130
Query: 187 LHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAP 225
L K IHR++ + N+L+ +++ KI DF L+ P
Sbjct: 131 LGTK---RYIHRNLATRNILVENENRVKIGDFGLTKVLP 166
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 68/158 (43%), Gaps = 18/158 (11%)
Query: 75 IGEGSYGRVYYGILKSGH----AAAIK--KLDASKQPDEEFLAQVSMVSRLKHENFVQLL 128
IGEG +G V+ GI S A AIK K S E+FL + + + H + V+L+
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 129 GYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLH 188
G + ++ E + G L L RK L + A + L YL
Sbjct: 83 GVITENPVWIIM-ELCTLGELRSFLQVRKYS--------LDLASLILYAYQLSTALAYLE 133
Query: 189 EKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
K +HRDI + NVL+ +D K+ DF LS D
Sbjct: 134 SK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 168
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 68/158 (43%), Gaps = 18/158 (11%)
Query: 75 IGEGSYGRVYYGILKSGH----AAAIK--KLDASKQPDEEFLAQVSMVSRLKHENFVQLL 128
IGEG +G V+ GI S A AIK K S E+FL + + + H + V+L+
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 129 GYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLH 188
G + ++ E + G L L RK L + A + L YL
Sbjct: 81 GVITENPVWIIM-ELCTLGELRSFLQVRKYS--------LDLASLILYAYQLSTALAYLE 131
Query: 189 EKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
K +HRDI + NVL+ +D K+ DF LS D
Sbjct: 132 SK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 166
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 68/158 (43%), Gaps = 18/158 (11%)
Query: 75 IGEGSYGRVYYGILKSGH----AAAIK--KLDASKQPDEEFLAQVSMVSRLKHENFVQLL 128
IGEG +G V+ GI S A AIK K S E+FL + + + H + V+L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 129 GYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLH 188
G + ++ E + G L L RK L + A + L YL
Sbjct: 78 GVITENPVWIIM-ELCTLGELRSFLQVRKYS--------LDLASLILYAYQLSTALAYLE 128
Query: 189 EKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
K +HRDI + NVL+ +D K+ DF LS D
Sbjct: 129 SK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 163
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 85/188 (45%), Gaps = 32/188 (17%)
Query: 75 IGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCV-- 132
IG+G +G V+ G + G A+K + ++ A++ L+HEN +LG+
Sbjct: 12 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRHEN---ILGFIAAD 67
Query: 133 -----DGTSRVLAYEFASNGSLHDILHGRK-GVKGAQPGPVLSWQQRVKIAVGAAKGLEY 186
T L ++ +GSL D L+ V+G +K+A+ A GL +
Sbjct: 68 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----------IKLALSTASGLAH 116
Query: 187 LH-----EKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS---NQAPDMAARLHSTRVLG 238
LH + P I HRD+KS N+L+ + IAD L+ + A D + RV G
Sbjct: 117 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV-G 175
Query: 239 TFGYHAPE 246
T Y APE
Sbjct: 176 TKRYMAPE 183
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 68/158 (43%), Gaps = 18/158 (11%)
Query: 75 IGEGSYGRVYYGILKSGH----AAAIK--KLDASKQPDEEFLAQVSMVSRLKHENFVQLL 128
IGEG +G V+ GI S A AIK K S E+FL + + + H + V+L+
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 129 GYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLH 188
G + ++ E + G L L RK L + A + L YL
Sbjct: 75 GVITENPVWIIM-ELCTLGELRSFLQVRKYS--------LDLASLILYAYQLSTALAYLE 125
Query: 189 EKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
K +HRDI + NVL+ +D K+ DF LS D
Sbjct: 126 SK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 160
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 81/184 (44%), Gaps = 24/184 (13%)
Query: 75 IGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDG 134
IG+G YG V+ G + G A+K +++ ++ ++HEN + + + G
Sbjct: 45 IGKGRYGEVWMGKWR-GEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILGFIAADIKG 103
Query: 135 T----SRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHE- 189
T L ++ NGSL+D L L + +K+A + GL +LH
Sbjct: 104 TGSWTQLYLITDYHENGSLYDYLKS----------TTLDAKSMLKLAYSSVSGLCHLHTE 153
Query: 190 ----KADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLH---STRVLGTFGY 242
+ P I HRD+KS N+L+ + IAD L+ + + +TRV GT Y
Sbjct: 154 IFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRV-GTKRY 212
Query: 243 HAPE 246
PE
Sbjct: 213 MPPE 216
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 85/188 (45%), Gaps = 32/188 (17%)
Query: 75 IGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCV-- 132
IG+G +G V+ G + G A+K + ++ A++ L+HEN +LG+
Sbjct: 17 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRHEN---ILGFIAAD 72
Query: 133 -----DGTSRVLAYEFASNGSLHDILHGRK-GVKGAQPGPVLSWQQRVKIAVGAAKGLEY 186
T L ++ +GSL D L+ V+G +K+A+ A GL +
Sbjct: 73 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----------IKLALSTASGLAH 121
Query: 187 LH-----EKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS---NQAPDMAARLHSTRVLG 238
LH + P I HRD+KS N+L+ + IAD L+ + A D + RV G
Sbjct: 122 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV-G 180
Query: 239 TFGYHAPE 246
T Y APE
Sbjct: 181 TKRYMAPE 188
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 68/158 (43%), Gaps = 18/158 (11%)
Query: 75 IGEGSYGRVYYGILKS----GHAAAIK--KLDASKQPDEEFLAQVSMVSRLKHENFVQLL 128
IGEG +G V+ GI S A AIK K S E+FL + + + H + V+L+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 129 GYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLH 188
G + ++ E + G L L RK L + A + L YL
Sbjct: 458 GVITENPVWIIM-ELCTLGELRSFLQVRKFS--------LDLASLILYAYQLSTALAYLE 508
Query: 189 EKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
K +HRDI + NVL+ +D K+ DF LS D
Sbjct: 509 SK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 543
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 94/207 (45%), Gaps = 31/207 (14%)
Query: 53 EVPAISVDELK----EITENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQP-- 105
E P EL E+ E + + +G G+YG V K+GH A+KKL Q
Sbjct: 4 ERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSII 63
Query: 106 -DEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQP 164
+ ++ ++ +KHEN + LL V +R L EF ++ + H + GA
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLD--VFTPARSLE-EF---NDVYLVTH----LMGADL 113
Query: 165 GPVLSWQQRVK-----IAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFD 219
++ Q+ + +GL+Y+H AD IIHRD+K SN+ + +D KI DF
Sbjct: 114 NNIVKCQKLTDDHVQFLIYQILRGLKYIH-SAD--IIHRDLKPSNLAVNEDCELKILDFG 170
Query: 220 LSNQAPDMAARLHSTRVLGTFGYHAPE 246
L+ D A +TR Y APE
Sbjct: 171 LARHTDDEMAGFVATR-----WYRAPE 192
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 92/207 (44%), Gaps = 31/207 (14%)
Query: 53 EVPAISVDELK----EITENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQP-- 105
E P EL E+ E + T + +G G+YG V +KSG A+KKL Q
Sbjct: 33 ERPTFYRQELNKTIWEVPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSII 92
Query: 106 -DEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQP 164
+ ++ ++ +KHEN + LL TS EF ++ + H + GA
Sbjct: 93 HAKRTYRELRLLKHMKHENVIGLLDVFTPATS---LEEF---NDVYLVTH----LMGADL 142
Query: 165 GPVLSWQQRVK-----IAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFD 219
++ Q+ + +GL+Y+H AD IIHRD+K SN+ + +D KI DF
Sbjct: 143 NNIVKCQKLTDDHVQFLIYQILRGLKYIH-SAD--IIHRDLKPSNLAVNEDCELKILDFG 199
Query: 220 LSNQAPDMAARLHSTRVLGTFGYHAPE 246
L+ D T + T Y APE
Sbjct: 200 LARHTDD-----EMTGYVATRWYRAPE 221
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 94/207 (45%), Gaps = 31/207 (14%)
Query: 53 EVPAISVDELK----EITENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQP-- 105
E P EL E+ E + + +G G+YG V K+GH A+KKL Q
Sbjct: 4 ERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSII 63
Query: 106 -DEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQP 164
+ ++ ++ +KHEN + LL V +R L EF ++ + H + GA
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLD--VFTPARSLE-EF---NDVYLVTH----LMGADL 113
Query: 165 GPVLSWQQRVK-----IAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFD 219
++ Q+ + +GL+Y+H AD IIHRD+K SN+ + +D KI DF
Sbjct: 114 NNIVKCQKLTDDHVQFLIYQILRGLKYIH-SAD--IIHRDLKPSNLAVNEDCELKILDFG 170
Query: 220 LSNQAPDMAARLHSTRVLGTFGYHAPE 246
L+ D A +TR Y APE
Sbjct: 171 LARHTDDEMAGFVATR-----WYRAPE 192
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 85/188 (45%), Gaps = 32/188 (17%)
Query: 75 IGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCV-- 132
IG+G +G V+ G + G A+K + ++ A++ L+HEN +LG+
Sbjct: 14 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRHEN---ILGFIAAD 69
Query: 133 -----DGTSRVLAYEFASNGSLHDILHGRK-GVKGAQPGPVLSWQQRVKIAVGAAKGLEY 186
T L ++ +GSL D L+ V+G +K+A+ A GL +
Sbjct: 70 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----------IKLALSTASGLAH 118
Query: 187 LH-----EKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS---NQAPDMAARLHSTRVLG 238
LH + P I HRD+KS N+L+ + IAD L+ + A D + RV G
Sbjct: 119 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV-G 177
Query: 239 TFGYHAPE 246
T Y APE
Sbjct: 178 TKRYMAPE 185
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 85/188 (45%), Gaps = 32/188 (17%)
Query: 75 IGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCV-- 132
IG+G +G V+ G + G A+K + ++ A++ L+HEN +LG+
Sbjct: 11 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRHEN---ILGFIAAD 66
Query: 133 -----DGTSRVLAYEFASNGSLHDILHGRK-GVKGAQPGPVLSWQQRVKIAVGAAKGLEY 186
T L ++ +GSL D L+ V+G +K+A+ A GL +
Sbjct: 67 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----------IKLALSTASGLAH 115
Query: 187 LH-----EKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS---NQAPDMAARLHSTRVLG 238
LH + P I HRD+KS N+L+ + IAD L+ + A D + RV G
Sbjct: 116 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV-G 174
Query: 239 TFGYHAPE 246
T Y APE
Sbjct: 175 TKRYMAPE 182
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 82/186 (44%), Gaps = 21/186 (11%)
Query: 67 ENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQPD---EEFLAQVSMVSRLKHE 122
ENF IGEG+YG VY K +G A+ K+ + + + ++S++ L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 123 NFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQ--PGPVLSWQQRVKIAVGA 180
N V+LL L +EF LH L P P++
Sbjct: 63 NIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK-----SYLFQL 112
Query: 181 AKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTF 240
+GL + H ++HRD+K N+LI + K+ADF L+ +A + R ++ V+ T
Sbjct: 113 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEVV-TL 167
Query: 241 GYHAPE 246
Y APE
Sbjct: 168 WYRAPE 173
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 82/186 (44%), Gaps = 21/186 (11%)
Query: 67 ENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQPD---EEFLAQVSMVSRLKHE 122
ENF IGEG+YG VY K +G A+ K+ + + + ++S++ L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 123 NFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQ--PGPVLSWQQRVKIAVGA 180
N V+LL L +EF LH L P P++
Sbjct: 62 NIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK-----SYLFQL 111
Query: 181 AKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTF 240
+GL + H ++HRD+K N+LI + K+ADF L+ +A + R ++ V+ T
Sbjct: 112 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEVV-TL 166
Query: 241 GYHAPE 246
Y APE
Sbjct: 167 WYRAPE 172
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 85/188 (45%), Gaps = 32/188 (17%)
Query: 75 IGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCV-- 132
IG+G +G V+ G + G A+K + ++ A++ L+HEN +LG+
Sbjct: 37 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRHEN---ILGFIAAD 92
Query: 133 -----DGTSRVLAYEFASNGSLHDILHGRK-GVKGAQPGPVLSWQQRVKIAVGAAKGLEY 186
T L ++ +GSL D L+ V+G +K+A+ A GL +
Sbjct: 93 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----------IKLALSTASGLAH 141
Query: 187 LH-----EKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS---NQAPDMAARLHSTRVLG 238
LH + P I HRD+KS N+L+ + IAD L+ + A D + RV G
Sbjct: 142 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV-G 200
Query: 239 TFGYHAPE 246
T Y APE
Sbjct: 201 TKRYMAPE 208
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 90/192 (46%), Gaps = 27/192 (14%)
Query: 64 EITENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQP---DEEFLAQVSMVSRL 119
E+ E + + +G G+YG V K+GH A+KKL Q + ++ ++ +
Sbjct: 15 EVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 74
Query: 120 KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVK---- 175
KHEN + LL V +R L EF ++ + H + GA ++ Q+
Sbjct: 75 KHENVIGLLD--VFTPARSLE-EF---NDVYLVTH----LMGADLNNIVKCQKLTDDHVQ 124
Query: 176 -IAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 234
+ +GL+Y+H AD IIHRD+K SN+ + +D KI DF L+ D A +T
Sbjct: 125 FLIYQILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVAT 181
Query: 235 RVLGTFGYHAPE 246
R Y APE
Sbjct: 182 R-----WYRAPE 188
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 85/188 (45%), Gaps = 32/188 (17%)
Query: 75 IGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCV-- 132
IG+G +G V+ G + G A+K + ++ A++ L+HEN +LG+
Sbjct: 50 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRHEN---ILGFIAAD 105
Query: 133 -----DGTSRVLAYEFASNGSLHDILHGRK-GVKGAQPGPVLSWQQRVKIAVGAAKGLEY 186
T L ++ +GSL D L+ V+G +K+A+ A GL +
Sbjct: 106 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----------IKLALSTASGLAH 154
Query: 187 LH-----EKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS---NQAPDMAARLHSTRVLG 238
LH + P I HRD+KS N+L+ + IAD L+ + A D + RV G
Sbjct: 155 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV-G 213
Query: 239 TFGYHAPE 246
T Y APE
Sbjct: 214 TKRYMAPE 221
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 85/174 (48%), Gaps = 15/174 (8%)
Query: 75 IGEGSYGRVYYGILKSGHA-AAIKKLDA-SKQPDEEFLAQVSMVSRLKHENFVQLLGYCV 132
+G+G++G+VY K AA K +D S++ E+++ ++ +++ H N V+LL
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 133 DGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKAD 192
+ + EF + G++ ++ ++ +P L+ Q + L YLH D
Sbjct: 105 YENNLWILIEFCAGGAVDAVM-----LELERP---LTESQIQVVCKQTLDALNYLH---D 153
Query: 193 PHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
IIHRD+K+ N+L D K+ADF +S + R +GT + APE
Sbjct: 154 NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQR--RDXFIGTPYWMAPE 205
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 80/186 (43%), Gaps = 19/186 (10%)
Query: 68 NFGTNALIGEGSYGRVYYG-ILKSGHAAAIKK------LDASKQPDEEFLAQVSMVSRLK 120
NF IG G + VY L G A+KK +DA + D + ++ ++ +L
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARAD--CIKEIDLLKQLN 90
Query: 121 HENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGA 180
H N ++ ++ + E A G L ++ K K P + W+ V++
Sbjct: 91 HPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTV-WKYFVQLC--- 146
Query: 181 AKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTF 240
LE++H + ++HRDIK +NV I V K+ D L HS ++GT
Sbjct: 147 -SALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS--LVGTP 200
Query: 241 GYHAPE 246
Y +PE
Sbjct: 201 YYMSPE 206
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 93/207 (44%), Gaps = 31/207 (14%)
Query: 53 EVPAISVDELK----EITENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQP-- 105
E P EL E+ E + A +G G+YG V K+GH A+KKL Q
Sbjct: 14 ERPTFYRQELNKTIWEVPERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSII 73
Query: 106 -DEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQP 164
+ ++ ++ +KHEN + LL V +R L EF ++ + H + GA
Sbjct: 74 HAKRTYRELRLLKHMKHENVIGLLD--VFTPARSLE-EF---NDVYLVTH----LMGADL 123
Query: 165 GPVLSWQQRVK-----IAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFD 219
++ Q+ + +GL+Y+H AD IIHRD+K SN+ + +D KI DF
Sbjct: 124 NNIVKCQKLTDDHVQFLIYQILRGLKYIH-SAD--IIHRDLKPSNLAVNEDCELKILDFG 180
Query: 220 LSNQAPDMAARLHSTRVLGTFGYHAPE 246
L+ D T + T Y APE
Sbjct: 181 LARHTDD-----EMTGYVATRWYRAPE 202
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 97/216 (44%), Gaps = 27/216 (12%)
Query: 40 APKGAQAVKVQPIEVPAISVDELKEITENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKK 98
P+G+ + +P + E+ E + + +G G+YG V K+GH A+KK
Sbjct: 15 VPRGSHMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKK 74
Query: 99 LDASKQP---DEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHG 155
L Q + ++ ++ +KHEN + LL V +R L EF ++ + H
Sbjct: 75 LSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD--VFTPARSLE-EF---NDVYLVTH- 127
Query: 156 RKGVKGAQPGPVLSWQQRVK-----IAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDD 210
+ GA ++ Q+ + +GL+Y+H AD IIHRD+K SN+ + +D
Sbjct: 128 ---LMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH-SAD--IIHRDLKPSNLAVNED 181
Query: 211 DVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
KI DF L+ D T + T Y APE
Sbjct: 182 CELKILDFGLARHTDD-----EMTGYVATRWYRAPE 212
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 97/216 (44%), Gaps = 27/216 (12%)
Query: 40 APKGAQAVKVQPIEVPAISVDELKEITENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKK 98
P+G+ + +P + E+ E + + +G G+YG V K+GH A+KK
Sbjct: 14 VPRGSHMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKK 73
Query: 99 LDASKQP---DEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHG 155
L Q + ++ ++ +KHEN + LL V +R L EF ++ + H
Sbjct: 74 LSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD--VFTPARSLE-EF---NDVYLVTH- 126
Query: 156 RKGVKGAQPGPVLSWQQRVK-----IAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDD 210
+ GA ++ Q+ + +GL+Y+H AD IIHRD+K SN+ + +D
Sbjct: 127 ---LMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH-SAD--IIHRDLKPSNLAVNED 180
Query: 211 DVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
KI DF L+ D T + T Y APE
Sbjct: 181 CELKILDFGLARHTDD-----EMTGYVATRWYRAPE 211
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 71/161 (44%), Gaps = 22/161 (13%)
Query: 75 IGEGSYGRVYYGILK-----SGHAAAIKKLDASKQPDEE--FLAQVSMVSRLKHENFVQL 127
+GEG +G+V +G A+K L P + ++ ++ L HE+ V+
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 128 LGYCVDG--TSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLE 185
G C D S L E+ GSL D L P + Q + A +G+
Sbjct: 76 KGCCEDQGEKSVQLVMEYVPLGSLRDYL----------PRHCVGLAQLLLFAQQICEGMA 125
Query: 186 YLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
YLH + H IHR + + NVL+ +D + KI DF L+ P+
Sbjct: 126 YLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPE 163
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 71/161 (44%), Gaps = 22/161 (13%)
Query: 75 IGEGSYGRVYYGILK-----SGHAAAIKKLDASKQPDEE--FLAQVSMVSRLKHENFVQL 127
+GEG +G+V +G A+K L P + ++ ++ L HE+ V+
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 128 LGYCVDG--TSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLE 185
G C D S L E+ GSL D L P + Q + A +G+
Sbjct: 77 KGCCEDQGEKSVQLVMEYVPLGSLRDYL----------PRHCVGLAQLLLFAQQICEGMA 126
Query: 186 YLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
YLH + H IHR + + NVL+ +D + KI DF L+ P+
Sbjct: 127 YLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPE 164
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 84/191 (43%), Gaps = 21/191 (10%)
Query: 67 ENFGTNALIGEGSYGRVYYGILKS-GHAAAIKKLDASKQPDEE---FLAQVSMVSRLKHE 122
E++ IG GSYGR KS G K+LD + E +++V+++ LKH
Sbjct: 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHP 65
Query: 123 NFVQLLGYCVDGTSRVL--AYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGA 180
N V+ +D T+ L E+ G L ++ KG + L + +++
Sbjct: 66 NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVI-----TKGTKERQYLDEEFVLRVMTQL 120
Query: 181 AKGLEYLHEKAD--PHIIHRDIKSSNVLIFDDDVAKIADFDLS---NQAPDMAARLHSTR 235
L+ H ++D ++HRD+K +NV + K+ DF L+ N D A
Sbjct: 121 TLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEF---- 176
Query: 236 VLGTFGYHAPE 246
+GT Y +PE
Sbjct: 177 -VGTPYYMSPE 186
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 66/158 (41%), Gaps = 18/158 (11%)
Query: 75 IGEGSYGRVYYGILKS----GHAAAIKKLD--ASKQPDEEFLAQVSMVSRLKHENFVQLL 128
IGEG +G V+ GI S A AIK S E+FL + + + H + V+L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 129 GYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLH 188
G + ++ E + G L L RK L + A + L YL
Sbjct: 78 GVITENPVWIIM-ELCTLGELRSFLQVRKFS--------LDLASLILYAYQLSTALAYLE 128
Query: 189 EKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
K +HRDI + NVL+ D K+ DF LS D
Sbjct: 129 SK---RFVHRDIAARNVLVSATDCVKLGDFGLSRYMED 163
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 74/153 (48%), Gaps = 17/153 (11%)
Query: 75 IGEGSYGRVYYGILKSGH-----AAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLG 129
+G G++G V G+ + A + K K EE + + ++ +L + V+L+G
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 130 YCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHE 189
C + +L E A G LH L G++ + PV ++ + G++YL E
Sbjct: 404 VC-QAEALMLVMEMAGGGPLHKFLVGKR-----EEIPV---SNVAELLHQVSMGMKYLEE 454
Query: 190 KADPHIIHRDIKSSNVLIFDDDVAKIADFDLSN 222
K + +HR++ + NVL+ + AKI+DF LS
Sbjct: 455 K---NFVHRNLAARNVLLVNRHYAKISDFGLSK 484
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 97/216 (44%), Gaps = 27/216 (12%)
Query: 40 APKGAQAVKVQPIEVPAISVDELKEITENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKK 98
P+G+ + +P + E+ E + + +G G+YG V K+GH A+KK
Sbjct: 15 VPRGSHMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKK 74
Query: 99 LDASKQP---DEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHG 155
L Q + ++ ++ +KHEN + LL V +R L EF ++ + H
Sbjct: 75 LSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD--VFTPARSLE-EF---NDVYLVTH- 127
Query: 156 RKGVKGAQPGPVLSWQQRVK-----IAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDD 210
+ GA ++ Q+ + +GL+Y+H AD IIHRD+K SN+ + +D
Sbjct: 128 ---LMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH-SAD--IIHRDLKPSNLAVNED 181
Query: 211 DVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
KI DF L+ D +TR Y APE
Sbjct: 182 CELKILDFGLARHTDDEMXGXVATR-----WYRAPE 212
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 83/191 (43%), Gaps = 30/191 (15%)
Query: 67 ENFGTNALIGEGSYGRVYY---GILKSGHAA-AIKKLDASKQPDEEFLAQVSMVSRLKHE 122
E + ++G+GS+G V I + +A I K A + L +V ++ +L H
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHP 81
Query: 123 NFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAK 182
N ++L D +S + E + G L D + RK S +I
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKR---------FSEHDAARIIKQVFS 132
Query: 183 GLEYLHEKADPHIIHRDIKSSNVLI----FDDDVAKIADFDLSN---QAPDMAARLHSTR 235
G+ Y+H+ +I+HRD+K N+L+ D D+ KI DF LS Q M R
Sbjct: 133 GITYMHKH---NIVHRDLKPENILLESKEKDCDI-KIIDFGLSTCFQQNTKMKDR----- 183
Query: 236 VLGTFGYHAPE 246
+GT Y APE
Sbjct: 184 -IGTAYYIAPE 193
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 93/207 (44%), Gaps = 31/207 (14%)
Query: 53 EVPAISVDELK----EITENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQP-- 105
E P EL E+ E + + +G G+YG V K+GH A+KKL Q
Sbjct: 4 ERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSII 63
Query: 106 -DEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQP 164
+ ++ ++ +KHEN + LL V +R L EF ++ + H + GA
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLD--VFTPARSLE-EF---NDVYLVTH----LMGADL 113
Query: 165 GPVLSWQQRVK-----IAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFD 219
++ Q+ + +GL+Y+H AD IIHRD+K SN+ + +D KI DF
Sbjct: 114 NNIVKCQKLTDDHVQFLIYQILRGLKYIH-SAD--IIHRDLKPSNLAVNEDCELKILDFG 170
Query: 220 LSNQAPDMAARLHSTRVLGTFGYHAPE 246
L+ D T + T Y APE
Sbjct: 171 LARHTDD-----EMTGYVATRWYRAPE 192
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 83/191 (43%), Gaps = 30/191 (15%)
Query: 67 ENFGTNALIGEGSYGRVYY---GILKSGHAA-AIKKLDASKQPDEEFLAQVSMVSRLKHE 122
E + ++G+GS+G V I + +A I K A + L +V ++ +L H
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHP 81
Query: 123 NFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAK 182
N ++L D +S + E + G L D + RK S +I
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKR---------FSEHDAARIIKQVFS 132
Query: 183 GLEYLHEKADPHIIHRDIKSSNVLI----FDDDVAKIADFDLSN---QAPDMAARLHSTR 235
G+ Y+H+ +I+HRD+K N+L+ D D+ KI DF LS Q M R
Sbjct: 133 GITYMHKH---NIVHRDLKPENILLESKEKDCDI-KIIDFGLSTCFQQNTKMKDR----- 183
Query: 236 VLGTFGYHAPE 246
+GT Y APE
Sbjct: 184 -IGTAYYIAPE 193
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 84/195 (43%), Gaps = 30/195 (15%)
Query: 66 TENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQPDEEFLA-----QVSMVSRL 119
T + A IG G+YG VY SGH A+K + EE L +V+++ RL
Sbjct: 3 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPN--GEEGLPISTVREVALLRRL 60
Query: 120 K---HENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKI 176
+ H N V+L+ C TSR E + + P P L + +
Sbjct: 61 EAFEHPNVVRLMDVC--ATSRT-DREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDL 117
Query: 177 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTR- 235
+GL++LH I+HRD+K N+L+ K+ADF L AR++S +
Sbjct: 118 MRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGL--------ARIYSYQM 166
Query: 236 ----VLGTFGYHAPE 246
V+ T Y APE
Sbjct: 167 ALDPVVVTLWYRAPE 181
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 84/195 (43%), Gaps = 30/195 (15%)
Query: 66 TENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQPDEEFLA-----QVSMVSRL 119
T + A IG G+YG VY SGH A+K + EE L +V+++ RL
Sbjct: 3 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPN--GEEGLPISTVREVALLRRL 60
Query: 120 K---HENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKI 176
+ H N V+L+ C TSR E + + P P L + +
Sbjct: 61 EAFEHPNVVRLMDVC--ATSRT-DREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDL 117
Query: 177 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTR- 235
+GL++LH I+HRD+K N+L+ K+ADF L AR++S +
Sbjct: 118 MRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGL--------ARIYSYQM 166
Query: 236 ----VLGTFGYHAPE 246
V+ T Y APE
Sbjct: 167 ALAPVVVTLWYRAPE 181
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 83/191 (43%), Gaps = 30/191 (15%)
Query: 67 ENFGTNALIGEGSYGRVYY---GILKSGHAA-AIKKLDASKQPDEEFLAQVSMVSRLKHE 122
E + ++G+GS+G V I + +A I K A + L +V ++ +L H
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHP 81
Query: 123 NFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAK 182
N ++L D +S + E + G L D + RK S +I
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKR---------FSEHDAARIIKQVFS 132
Query: 183 GLEYLHEKADPHIIHRDIKSSNVLI----FDDDVAKIADFDLSN---QAPDMAARLHSTR 235
G+ Y+H+ +I+HRD+K N+L+ D D+ KI DF LS Q M R
Sbjct: 133 GITYMHKH---NIVHRDLKPENILLESKEKDCDI-KIIDFGLSTCFQQNTKMKDR----- 183
Query: 236 VLGTFGYHAPE 246
+GT Y APE
Sbjct: 184 -IGTAYYIAPE 193
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 84/195 (43%), Gaps = 30/195 (15%)
Query: 66 TENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQPDEEFLA-----QVSMVSRL 119
T + A IG G+YG VY SGH A+K + EE L +V+++ RL
Sbjct: 3 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPN--GEEGLPISTVREVALLRRL 60
Query: 120 K---HENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKI 176
+ H N V+L+ C TSR E + + P P L + +
Sbjct: 61 EAFEHPNVVRLMDVC--ATSRT-DREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDL 117
Query: 177 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTR- 235
+GL++LH I+HRD+K N+L+ K+ADF L AR++S +
Sbjct: 118 MRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGL--------ARIYSYQM 166
Query: 236 ----VLGTFGYHAPE 246
V+ T Y APE
Sbjct: 167 ALFPVVVTLWYRAPE 181
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 67/158 (42%), Gaps = 18/158 (11%)
Query: 75 IGEGSYGRVYYGILKS----GHAAAIK--KLDASKQPDEEFLAQVSMVSRLKHENFVQLL 128
IGEG +G V+ GI S A AIK K S E+FL + + + H + V+L+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 129 GYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLH 188
G + ++ E + G L L RK L + A + L YL
Sbjct: 458 GVITENPVWIIM-ELCTLGELRSFLQVRKFS--------LDLASLILYAYQLSTALAYLE 508
Query: 189 EKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
K +HRDI + NVL+ D K+ DF LS D
Sbjct: 509 SK---RFVHRDIAARNVLVSATDCVKLGDFGLSRYMED 543
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 93/207 (44%), Gaps = 31/207 (14%)
Query: 53 EVPAISVDELK----EITENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQP-- 105
E P EL E+ E + + +G G+YG V K+GH A+KKL Q
Sbjct: 10 ERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSII 69
Query: 106 -DEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQP 164
+ ++ ++ +KHEN + LL V +R L EF ++ + H + GA
Sbjct: 70 HAKRTYRELRLLKHMKHENVIGLLD--VFTPARSLE-EF---NDVYLVTH----LMGADL 119
Query: 165 GPVLSWQQRVK-----IAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFD 219
++ Q+ + +GL+Y+H AD IIHRD+K SN+ + +D KI DF
Sbjct: 120 NNIVKCQKLTDDHVQFLIYQILRGLKYIH-SAD--IIHRDLKPSNLAVNEDCELKILDFG 176
Query: 220 LSNQAPDMAARLHSTRVLGTFGYHAPE 246
L+ D T + T Y APE
Sbjct: 177 LARHTDD-----EMTGYVATRWYRAPE 198
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 78/159 (49%), Gaps = 19/159 (11%)
Query: 74 LIGEGSYGRVYYGI-LKSGHAAAIK---KLDASKQPDEEFLA---QVSMVSRLKHENFVQ 126
++G G +G V+ G+ + G + I K+ K + F A + + L H + V+
Sbjct: 38 VLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVR 97
Query: 127 LLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEY 186
LLG C G+S L ++ GSL D + +G G P +L+W V AKG+ Y
Sbjct: 98 LLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALG--PQLLLNW------GVQIAKGMYY 148
Query: 187 LHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAP 225
L E ++HR++ + NVL+ ++ADF +++ P
Sbjct: 149 LEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLP 184
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 78/159 (49%), Gaps = 19/159 (11%)
Query: 74 LIGEGSYGRVYYGI-LKSGHAAAIK---KLDASKQPDEEFLA---QVSMVSRLKHENFVQ 126
++G G +G V+ G+ + G + I K+ K + F A + + L H + V+
Sbjct: 20 VLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVR 79
Query: 127 LLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEY 186
LLG C G+S L ++ GSL D + +G G P +L+W V AKG+ Y
Sbjct: 80 LLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALG--PQLLLNW------GVQIAKGMYY 130
Query: 187 LHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAP 225
L E ++HR++ + NVL+ ++ADF +++ P
Sbjct: 131 LEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLP 166
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 82/196 (41%), Gaps = 29/196 (14%)
Query: 66 TENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQPDEEF------LAQVSMVSR 118
T + A IG G+YG VY SGH A+K + + +V+++ R
Sbjct: 8 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRR 67
Query: 119 LK---HENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVK 175
L+ H N V+L+ C TSR E + + P P L +
Sbjct: 68 LEAFEHPNVVRLMDVC--ATSRT-DREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKD 124
Query: 176 IAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHS-- 233
+ +GL++LH I+HRD+K N+L+ K+ADF L AR++S
Sbjct: 125 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGL--------ARIYSYQ 173
Query: 234 ---TRVLGTFGYHAPE 246
T V+ T Y APE
Sbjct: 174 MALTPVVVTLWYRAPE 189
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 89/192 (46%), Gaps = 27/192 (14%)
Query: 64 EITENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQP---DEEFLAQVSMVSRL 119
E+ E + + +G G+YG V K+GH A+KKL Q + ++ ++ +
Sbjct: 15 EVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 74
Query: 120 KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVK---- 175
KHEN + LL V +R L EF ++ + H + GA ++ Q+
Sbjct: 75 KHENVIGLLD--VFTPARSLE-EF---NDVYLVTH----LMGADLNNIVKCQKLTDDHVQ 124
Query: 176 -IAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 234
+ +GL+Y+H AD IIHRD+K SN+ + +D KI DF L+ D T
Sbjct: 125 FLIYQILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMT 176
Query: 235 RVLGTFGYHAPE 246
+ T Y APE
Sbjct: 177 GYVATRWYRAPE 188
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 86/176 (48%), Gaps = 19/176 (10%)
Query: 75 IGEGSYGRVYYGILKSGHAAAIKKLDASKQPDE--EFLAQVSMVSRLKHENFVQLLG-YC 131
+G+G++G+VY K A A K+ +K +E +++ ++ +++ H V+LLG Y
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 132 VDGTSRVLAYEFASNGSLHDI-LHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEK 190
DG ++ EF G++ I L +G+ Q V + L +LH K
Sbjct: 87 HDGKLWIMI-EFCPGGAVDAIMLELDRGLTEPQIQVVCR---------QMLEALNFLHSK 136
Query: 191 ADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
IIHRD+K+ NVL+ + ++ADF +S A ++ +GT + APE
Sbjct: 137 ---RIIHRDLKAGNVLMTLEGDIRLADFGVS--AKNLKTLQKRDSFIGTPYWMAPE 187
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 86/176 (48%), Gaps = 19/176 (10%)
Query: 75 IGEGSYGRVYYGILKSGHAAAIKKLDASKQPDE--EFLAQVSMVSRLKHENFVQLLG-YC 131
+G+G++G+VY K A A K+ +K +E +++ ++ +++ H V+LLG Y
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 132 VDGTSRVLAYEFASNGSLHDI-LHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEK 190
DG ++ EF G++ I L +G+ Q V + L +LH K
Sbjct: 79 HDGKLWIM-IEFCPGGAVDAIMLELDRGLTEPQIQVVCR---------QMLEALNFLHSK 128
Query: 191 ADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
IIHRD+K+ NVL+ + ++ADF +S A ++ +GT + APE
Sbjct: 129 ---RIIHRDLKAGNVLMTLEGDIRLADFGVS--AKNLKTLQKRDSFIGTPYWMAPE 179
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 84/184 (45%), Gaps = 17/184 (9%)
Query: 67 ENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQPD---EEFLAQVSMVSRLKHE 122
ENF IGEG+YG VY K +G A+KK+ + + + ++S++ L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 123 NFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAK 182
N V+LL L +E + L + + G P P++ +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEHV-HQDLKTFMDA-SALTGI-PLPLIK-----SYLFQLLQ 113
Query: 183 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 242
GL + H ++HRD+K N+LI + K+ADF L+ +A + R ++ V+ T Y
Sbjct: 114 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEVV-TLWY 168
Query: 243 HAPE 246
APE
Sbjct: 169 RAPE 172
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 93/207 (44%), Gaps = 31/207 (14%)
Query: 53 EVPAISVDELK----EITENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQP-- 105
E P EL E+ E + + +G G+YG V K+GH A+KKL Q
Sbjct: 4 ERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSII 63
Query: 106 -DEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQP 164
+ ++ ++ +KHEN + LL V +R L EF ++ + H + GA
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLD--VFTPARSLE-EF---NDVYLVTH----LMGADL 113
Query: 165 GPVLSWQQRVK-----IAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFD 219
++ Q+ + +GL+Y+H AD IIHRD+K SN+ + +D KI DF
Sbjct: 114 NNIVKCQKLTDDHVQFLIYQILRGLKYIH-SAD--IIHRDLKPSNLAVNEDCELKILDFY 170
Query: 220 LSNQAPDMAARLHSTRVLGTFGYHAPE 246
L+ D T + T Y APE
Sbjct: 171 LARHTDD-----EMTGYVATRWYRAPE 192
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 78/162 (48%), Gaps = 20/162 (12%)
Query: 68 NFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQPD---EEFLAQVSMVSRLKHEN 123
N+ IG+G++ +V + +G A+K +D ++ ++ +V ++ L H N
Sbjct: 8 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 67
Query: 124 FVQLLGYCVDGTSRVLAYEFASNGSLHDIL--HGRKGVKGAQPGPVLSWQQRVKIAVGAA 181
V+L + L E+AS G + D L HG K A+ ++Q V
Sbjct: 68 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARA----KFRQIVS------ 117
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQ 223
++Y H+K I+HRD+K+ N+L+ D KIADF SN+
Sbjct: 118 -AVQYCHQK---FIVHRDLKAENLLLDADMNIKIADFGFSNE 155
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 75/163 (46%), Gaps = 20/163 (12%)
Query: 72 NALIGEGSYGRVYYGIL-----KSGHAAAIKKLDASKQPDE--EFLAQVSMVSRLKHENF 124
N +IG G +G VY+G L K H A +K L+ E +FL + ++ H N
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCA-VKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 91
Query: 125 VQLLGYCVDGT-SRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKG 183
+ LLG C+ S ++ + +G L R ++ P + + + + AKG
Sbjct: 92 LSLLGICLRSEGSPLVVLPYMKHGDL------RNFIRNETHNPTV--KDLIGFGLQVAKG 143
Query: 184 LEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
++YL K +HRD+ + N ++ + K+ADF L+ D
Sbjct: 144 MKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYD 183
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 75/163 (46%), Gaps = 20/163 (12%)
Query: 72 NALIGEGSYGRVYYGIL-----KSGHAAAIKKLDASKQPDE--EFLAQVSMVSRLKHENF 124
N +IG G +G VY+G L K H A +K L+ E +FL + ++ H N
Sbjct: 30 NEVIGRGHFGCVYHGTLLDNDGKKIHCA-VKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 88
Query: 125 VQLLGYCVDGT-SRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKG 183
+ LLG C+ S ++ + +G L R ++ P + + + + AKG
Sbjct: 89 LSLLGICLRSEGSPLVVLPYMKHGDL------RNFIRNETHNPTV--KDLIGFGLQVAKG 140
Query: 184 LEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
++YL K +HRD+ + N ++ + K+ADF L+ D
Sbjct: 141 MKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYD 180
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 70/158 (44%), Gaps = 9/158 (5%)
Query: 94 AAIKKLDASK--QPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHD 151
AIK+++ K +E L ++ +S+ H N V V L + S GS+ D
Sbjct: 38 VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLD 97
Query: 152 ILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDD 211
I+ KG VL I +GLEYLH+ IHRD+K+ N+L+ +D
Sbjct: 98 IIK-HIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDG 153
Query: 212 VAKIADFDLS---NQAPDMAARLHSTRVLGTFGYHAPE 246
+IADF +S D+ +GT + APE
Sbjct: 154 SVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPE 191
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 75/163 (46%), Gaps = 20/163 (12%)
Query: 72 NALIGEGSYGRVYYGIL-----KSGHAAAIKKLDASKQPDE--EFLAQVSMVSRLKHENF 124
N +IG G +G VY+G L K H A +K L+ E +FL + ++ H N
Sbjct: 53 NEVIGRGHFGCVYHGTLLDNDGKKIHCA-VKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 111
Query: 125 VQLLGYCVDGT-SRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKG 183
+ LLG C+ S ++ + +G L R ++ P + + + + AKG
Sbjct: 112 LSLLGICLRSEGSPLVVLPYMKHGDL------RNFIRNETHNPTV--KDLIGFGLQVAKG 163
Query: 184 LEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
++YL K +HRD+ + N ++ + K+ADF L+ D
Sbjct: 164 MKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYD 203
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 83/184 (45%), Gaps = 17/184 (9%)
Query: 67 ENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQPD---EEFLAQVSMVSRLKHE 122
ENF IGEG+YG VY K +G A+KK+ + + + ++S++ L H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 123 NFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAK 182
N V+LL L +E + L + + G P P++ +
Sbjct: 66 NIVKLLDVIHTENKLYLVFEHV-DQDLKKFMDA-SALTGI-PLPLIK-----SYLFQLLQ 117
Query: 183 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 242
GL + H ++HRD+K N+LI + K+ADF L+ +A + R + V+ T Y
Sbjct: 118 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVV-TLWY 172
Query: 243 HAPE 246
APE
Sbjct: 173 RAPE 176
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 75/163 (46%), Gaps = 20/163 (12%)
Query: 72 NALIGEGSYGRVYYGIL-----KSGHAAAIKKLDASKQPDE--EFLAQVSMVSRLKHENF 124
N +IG G +G VY+G L K H A +K L+ E +FL + ++ H N
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCA-VKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 92
Query: 125 VQLLGYCVDGT-SRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKG 183
+ LLG C+ S ++ + +G L R ++ P + + + + AKG
Sbjct: 93 LSLLGICLRSEGSPLVVLPYMKHGDL------RNFIRNETHNPTV--KDLIGFGLQVAKG 144
Query: 184 LEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
++YL K +HRD+ + N ++ + K+ADF L+ D
Sbjct: 145 MKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYD 184
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 75/163 (46%), Gaps = 20/163 (12%)
Query: 72 NALIGEGSYGRVYYGIL-----KSGHAAAIKKLDASKQPDE--EFLAQVSMVSRLKHENF 124
N +IG G +G VY+G L K H A +K L+ E +FL + ++ H N
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCA-VKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 92
Query: 125 VQLLGYCVDGT-SRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKG 183
+ LLG C+ S ++ + +G L R ++ P + + + + AKG
Sbjct: 93 LSLLGICLRSEGSPLVVLPYMKHGDL------RNFIRNETHNPTV--KDLIGFGLQVAKG 144
Query: 184 LEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
++YL K +HRD+ + N ++ + K+ADF L+ D
Sbjct: 145 MKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYD 184
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 75/163 (46%), Gaps = 20/163 (12%)
Query: 72 NALIGEGSYGRVYYGIL-----KSGHAAAIKKLDASKQPDE--EFLAQVSMVSRLKHENF 124
N +IG G +G VY+G L K H A +K L+ E +FL + ++ H N
Sbjct: 27 NEVIGRGHFGCVYHGTLLDNDGKKIHCA-VKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 85
Query: 125 VQLLGYCVDGT-SRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKG 183
+ LLG C+ S ++ + +G L R ++ P + + + + AKG
Sbjct: 86 LSLLGICLRSEGSPLVVLPYMKHGDL------RNFIRNETHNPTV--KDLIGFGLQVAKG 137
Query: 184 LEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
++YL K +HRD+ + N ++ + K+ADF L+ D
Sbjct: 138 MKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYD 177
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 75/163 (46%), Gaps = 20/163 (12%)
Query: 72 NALIGEGSYGRVYYGIL-----KSGHAAAIKKLDASKQPDE--EFLAQVSMVSRLKHENF 124
N +IG G +G VY+G L K H A +K L+ E +FL + ++ H N
Sbjct: 32 NEVIGRGHFGCVYHGTLLDNDGKKIHCA-VKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 90
Query: 125 VQLLGYCVDGT-SRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKG 183
+ LLG C+ S ++ + +G L R ++ P + + + + AKG
Sbjct: 91 LSLLGICLRSEGSPLVVLPYMKHGDL------RNFIRNETHNPTV--KDLIGFGLQVAKG 142
Query: 184 LEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
++YL K +HRD+ + N ++ + K+ADF L+ D
Sbjct: 143 MKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYD 182
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 75/163 (46%), Gaps = 20/163 (12%)
Query: 72 NALIGEGSYGRVYYGIL-----KSGHAAAIKKLDASKQPDE--EFLAQVSMVSRLKHENF 124
N +IG G +G VY+G L K H A +K L+ E +FL + ++ H N
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCA-VKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 93
Query: 125 VQLLGYCVDGT-SRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKG 183
+ LLG C+ S ++ + +G L R ++ P + + + + AKG
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDL------RNFIRNETHNPTV--KDLIGFGLQVAKG 145
Query: 184 LEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
++YL K +HRD+ + N ++ + K+ADF L+ D
Sbjct: 146 MKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYD 185
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 75/163 (46%), Gaps = 20/163 (12%)
Query: 72 NALIGEGSYGRVYYGIL-----KSGHAAAIKKLDASKQPDE--EFLAQVSMVSRLKHENF 124
N +IG G +G VY+G L K H A +K L+ E +FL + ++ H N
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCA-VKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 93
Query: 125 VQLLGYCVDGT-SRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKG 183
+ LLG C+ S ++ + +G L R ++ P + + + + AKG
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDL------RNFIRNETHNPTV--KDLIGFGLQVAKG 145
Query: 184 LEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
++YL K +HRD+ + N ++ + K+ADF L+ D
Sbjct: 146 MKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYD 185
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 70/158 (44%), Gaps = 9/158 (5%)
Query: 94 AAIKKLDASK--QPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHD 151
AIK+++ K +E L ++ +S+ H N V V L + S GS+ D
Sbjct: 43 VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLD 102
Query: 152 ILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDD 211
I+ KG VL I +GLEYLH+ IHRD+K+ N+L+ +D
Sbjct: 103 IIK-HIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDG 158
Query: 212 VAKIADFDLS---NQAPDMAARLHSTRVLGTFGYHAPE 246
+IADF +S D+ +GT + APE
Sbjct: 159 SVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPE 196
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 75/163 (46%), Gaps = 20/163 (12%)
Query: 72 NALIGEGSYGRVYYGIL-----KSGHAAAIKKLDASKQPDE--EFLAQVSMVSRLKHENF 124
N +IG G +G VY+G L K H A +K L+ E +FL + ++ H N
Sbjct: 54 NEVIGRGHFGCVYHGTLLDNDGKKIHCA-VKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 112
Query: 125 VQLLGYCVDGT-SRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKG 183
+ LLG C+ S ++ + +G L R ++ P + + + + AKG
Sbjct: 113 LSLLGICLRSEGSPLVVLPYMKHGDL------RNFIRNETHNPTV--KDLIGFGLQVAKG 164
Query: 184 LEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
++YL K +HRD+ + N ++ + K+ADF L+ D
Sbjct: 165 MKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYD 204
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 91/203 (44%), Gaps = 44/203 (21%)
Query: 56 AISVDELKEITE--------NFGTNALIGEGSYGRV-----YYGILKSGHAA-AIKKLDA 101
++SVD K + + N +GEG +G+V ++ ++G+ A+K L
Sbjct: 4 SLSVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKE 63
Query: 102 SKQPDE--EFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGV 159
+ P E + L++ +++ ++ H + ++L G C +L E+A GSL L + V
Sbjct: 64 NASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKV 123
Query: 160 KGAQPGP--------------------VLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRD 199
GP L+ + A ++G++YL E + ++HRD
Sbjct: 124 -----GPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMS---LVHRD 175
Query: 200 IKSSNVLIFDDDVAKIADFDLSN 222
+ + N+L+ + KI+DF LS
Sbjct: 176 LAARNILVAEGRKMKISDFGLSR 198
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 91/203 (44%), Gaps = 44/203 (21%)
Query: 56 AISVDELKEITE--------NFGTNALIGEGSYGRV-----YYGILKSGHAA-AIKKLDA 101
++SVD K + + N +GEG +G+V ++ ++G+ A+K L
Sbjct: 4 SLSVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKE 63
Query: 102 SKQPDE--EFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGV 159
+ P E + L++ +++ ++ H + ++L G C +L E+A GSL L + V
Sbjct: 64 NASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKV 123
Query: 160 KGAQPGP--------------------VLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRD 199
GP L+ + A ++G++YL A+ ++HRD
Sbjct: 124 -----GPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRD 175
Query: 200 IKSSNVLIFDDDVAKIADFDLSN 222
+ + N+L+ + KI+DF LS
Sbjct: 176 LAARNILVAEGRKMKISDFGLSR 198
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 91/203 (44%), Gaps = 44/203 (21%)
Query: 56 AISVDELKEITE--------NFGTNALIGEGSYGRV-----YYGILKSGHAA-AIKKLDA 101
++SVD K + + N +GEG +G+V ++ ++G+ A+K L
Sbjct: 4 SLSVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKE 63
Query: 102 SKQPDE--EFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGV 159
+ P E + L++ +++ ++ H + ++L G C +L E+A GSL L + V
Sbjct: 64 NASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKV 123
Query: 160 KGAQPGP--------------------VLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRD 199
GP L+ + A ++G++YL A+ ++HRD
Sbjct: 124 -----GPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRD 175
Query: 200 IKSSNVLIFDDDVAKIADFDLSN 222
+ + N+L+ + KI+DF LS
Sbjct: 176 LAARNILVAEGRKMKISDFGLSR 198
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 99/220 (45%), Gaps = 32/220 (14%)
Query: 40 APKGAQAVKVQPIEVPAISVDELK----EITENFGTNALIGEGSYGRVYYGI-LKSGHAA 94
P+G+ +++ E P EL E+ E + + +G G+YG V K+G
Sbjct: 15 VPRGSHMLEMSQ-ERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRV 73
Query: 95 AIKKLDASKQP---DEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHD 151
A+KKL Q + ++ ++ +KHEN + LL V +R L EF ++
Sbjct: 74 AVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD--VFTPARSLE-EF---NDVYL 127
Query: 152 ILHGRKGVKGAQPGPVLSWQQRVK-----IAVGAAKGLEYLHEKADPHIIHRDIKSSNVL 206
+ H + GA ++ Q+ + +GL+Y+H AD IIHRD+K SN+
Sbjct: 128 VTH----LMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH-SAD--IIHRDLKPSNLA 180
Query: 207 IFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
+ +D KI DF L+ D T + T Y APE
Sbjct: 181 VNEDCELKILDFGLARHTDD-----EMTGYVATRWYRAPE 215
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 83/191 (43%), Gaps = 21/191 (10%)
Query: 67 ENFGTNALIGEGSYGRVYYGILKS-GHAAAIKKLDASKQPDEE---FLAQVSMVSRLKHE 122
E++ IG GSYGR KS G K+LD + E +++V+++ LKH
Sbjct: 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHP 65
Query: 123 NFVQLLGYCVDGTSRVL--AYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGA 180
N V+ +D T+ L E+ G L ++ KG + L + +++
Sbjct: 66 NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVI-----TKGTKERQYLDEEFVLRVMTQL 120
Query: 181 AKGLEYLHEKAD--PHIIHRDIKSSNVLIFDDDVAKIADFDLS---NQAPDMAARLHSTR 235
L+ H ++D ++HRD+K +NV + K+ DF L+ N A
Sbjct: 121 TLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTF---- 176
Query: 236 VLGTFGYHAPE 246
+GT Y +PE
Sbjct: 177 -VGTPYYMSPE 186
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 86/176 (48%), Gaps = 15/176 (8%)
Query: 74 LIGE-GSYGRVYYGILKSGHA-AAIKKLDA-SKQPDEEFLAQVSMVSRLKHENFVQLLGY 130
+IGE G +G+VY K AA K +D S++ E+++ ++ +++ H N V+LL
Sbjct: 16 IIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 75
Query: 131 CVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEK 190
+ + EF + G++ ++ ++ +P L+ Q + L YLH
Sbjct: 76 FYYENNLWILIEFCAGGAVDAVM-----LELERP---LTESQIQVVCKQTLDALNYLH-- 125
Query: 191 ADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
D IIHRD+K+ N+L D K+ADF +S + + + +GT + APE
Sbjct: 126 -DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDS-FIGTPYWMAPE 179
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 74/163 (45%), Gaps = 13/163 (7%)
Query: 67 ENFGTNALIGEGSYGRVYYGILKS-GHAAAIKKLDASKQPDEE---FLAQVSMVSRLKHE 122
E++ IG GSYGR KS G K+LD + E +++V+++ LKH
Sbjct: 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHP 65
Query: 123 NFVQLLGYCVDGTSRVL--AYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGA 180
N V+ +D T+ L E+ G L ++ KG + L + +++
Sbjct: 66 NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVI-----TKGTKERQYLDEEFVLRVMTQL 120
Query: 181 AKGLEYLHEKAD--PHIIHRDIKSSNVLIFDDDVAKIADFDLS 221
L+ H ++D ++HRD+K +NV + K+ DF L+
Sbjct: 121 TLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA 163
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 79/164 (48%), Gaps = 16/164 (9%)
Query: 64 EITENFGTNALIGEGSYGRVYYGILKSGHA-AAIKKLDASKQPD---EEFLAQVSMVSRL 119
++ +N+ LIG GSYG VY K+ + AIKK++ + + L ++++++RL
Sbjct: 25 KVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRL 84
Query: 120 KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILH-GRKGVKGAQPGPVLSWQQRVK-IA 177
K + ++L ++ + L+ +L +K P+ +Q VK I
Sbjct: 85 KSDYIIRL-------HDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTIL 137
Query: 178 VGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 221
G +++HE IIHRD+K +N L+ D KI DF L+
Sbjct: 138 YNLLLGEKFIHESG---IIHRDLKPANCLLNQDCSVKICDFGLA 178
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 20/163 (12%)
Query: 72 NALIGEGSYGRVYYGIL-----KSGHAAAIKKLDASKQPDE--EFLAQVSMVSRLKHENF 124
N +IG G +G VY+G L K H A +K L+ E +FL + ++ H N
Sbjct: 40 NEVIGRGHFGCVYHGTLLDNDGKKIHCA-VKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 98
Query: 125 VQLLGYCVDGT-SRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKG 183
+ LLG C+ S ++ + +G L R ++ P + + + + AKG
Sbjct: 99 LSLLGICLRSEGSPLVVLPYMKHGDL------RNFIRNETHNPTV--KDLIGFGLQVAKG 150
Query: 184 LEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
+++L K +HRD+ + N ++ + K+ADF L+ D
Sbjct: 151 MKFLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYD 190
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 20/163 (12%)
Query: 72 NALIGEGSYGRVYYGIL-----KSGHAAAIKKLDASKQPDE--EFLAQVSMVSRLKHENF 124
N +IG G +G VY+G L K H A +K L+ E +FL + ++ H N
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCA-VKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 94
Query: 125 VQLLGYCVDGT-SRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKG 183
+ LLG C+ S ++ + +G L R ++ P + + + + AKG
Sbjct: 95 LSLLGICLRSEGSPLVVLPYMKHGDL------RNFIRNETHNPTV--KDLIGFGLQVAKG 146
Query: 184 LEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
+++L K +HRD+ + N ++ + K+ADF L+ D
Sbjct: 147 MKFLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMLD 186
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 20/163 (12%)
Query: 72 NALIGEGSYGRVYYGIL-----KSGHAAAIKKLDASKQPDE--EFLAQVSMVSRLKHENF 124
N +IG G +G VY+G L K H A +K L+ E +FL + ++ H N
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCA-VKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 91
Query: 125 VQLLGYCVDGT-SRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKG 183
+ LLG C+ S ++ + +G L R ++ P + + + + AKG
Sbjct: 92 LSLLGICLRSEGSPLVVLPYMKHGDL------RNFIRNETHNPTV--KDLIGFGLQVAKG 143
Query: 184 LEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
+++L K +HRD+ + N ++ + K+ADF L+ D
Sbjct: 144 MKFLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYD 183
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 20/163 (12%)
Query: 72 NALIGEGSYGRVYYGIL-----KSGHAAAIKKLDASKQPDE--EFLAQVSMVSRLKHENF 124
N +IG G +G VY+G L K H A +K L+ E +FL + ++ H N
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCA-VKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 93
Query: 125 VQLLGYCVDGT-SRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKG 183
+ LLG C+ S ++ + +G L R ++ P + + + + AKG
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDL------RNFIRNETHNPTV--KDLIGFGLQVAKG 145
Query: 184 LEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
+++L K +HRD+ + N ++ + K+ADF L+ D
Sbjct: 146 MKFLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYD 185
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 20/163 (12%)
Query: 72 NALIGEGSYGRVYYGIL-----KSGHAAAIKKLDASKQPDE--EFLAQVSMVSRLKHENF 124
N +IG G +G VY+G L K H A +K L+ E +FL + ++ H N
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCA-VKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 94
Query: 125 VQLLGYCVDGT-SRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKG 183
+ LLG C+ S ++ + +G L R ++ P + + + + AKG
Sbjct: 95 LSLLGICLRSEGSPLVVLPYMKHGDL------RNFIRNETHNPTV--KDLIGFGLQVAKG 146
Query: 184 LEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
+++L K +HRD+ + N ++ + K+ADF L+ D
Sbjct: 147 MKFLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYD 186
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 20/163 (12%)
Query: 72 NALIGEGSYGRVYYGIL-----KSGHAAAIKKLDASKQPDE--EFLAQVSMVSRLKHENF 124
N +IG G +G VY+G L K H A +K L+ E +FL + ++ H N
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCA-VKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 93
Query: 125 VQLLGYCVDGT-SRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKG 183
+ LLG C+ S ++ + +G L R ++ P + + + + AKG
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDL------RNFIRNETHNPTV--KDLIGFGLQVAKG 145
Query: 184 LEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
+++L K +HRD+ + N ++ + K+ADF L+ D
Sbjct: 146 MKFLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYD 185
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 84/201 (41%), Gaps = 29/201 (14%)
Query: 60 DELKEITENFGTNALIGEGSYGRVYYG--ILKSGHAAAIKKLDASKQPDEEFLAQVSMVS 117
D L + + A IGEG+YG+V+ + G A+K++ + L+ + V+
Sbjct: 4 DGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVA 63
Query: 118 RLKH------ENFVQLLGYC-VDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSW 170
L+H N V+L C V T R D+ V P P +
Sbjct: 64 VLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKV----PEPGVPT 119
Query: 171 QQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAAR 230
+ + +GL++LH ++HRD+K N+L+ K+ADF L AR
Sbjct: 120 ETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGL--------AR 168
Query: 231 LHS-----TRVLGTFGYHAPE 246
++S T V+ T Y APE
Sbjct: 169 IYSFQMALTSVVVTLWYRAPE 189
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 20/163 (12%)
Query: 72 NALIGEGSYGRVYYGIL-----KSGHAAAIKKLDASKQPDE--EFLAQVSMVSRLKHENF 124
N +IG G +G VY+G L K H A +K L+ E +FL + ++ H N
Sbjct: 94 NEVIGRGHFGCVYHGTLLDNDGKKIHCA-VKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 152
Query: 125 VQLLGYCVDGT-SRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKG 183
+ LLG C+ S ++ + +G L R ++ P + + + + AKG
Sbjct: 153 LSLLGICLRSEGSPLVVLPYMKHGDL------RNFIRNETHNPTV--KDLIGFGLQVAKG 204
Query: 184 LEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
+++L K +HRD+ + N ++ + K+ADF L+ D
Sbjct: 205 MKFLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYD 244
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 84/201 (41%), Gaps = 29/201 (14%)
Query: 60 DELKEITENFGTNALIGEGSYGRVYYG--ILKSGHAAAIKKLDASKQPDEEFLAQVSMVS 117
D L + + A IGEG+YG+V+ + G A+K++ + L+ + V+
Sbjct: 4 DGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVA 63
Query: 118 RLKH------ENFVQLLGYC-VDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSW 170
L+H N V+L C V T R D+ V P P +
Sbjct: 64 VLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKV----PEPGVPT 119
Query: 171 QQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAAR 230
+ + +GL++LH ++HRD+K N+L+ K+ADF L AR
Sbjct: 120 ETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGL--------AR 168
Query: 231 LHS-----TRVLGTFGYHAPE 246
++S T V+ T Y APE
Sbjct: 169 IYSFQMALTSVVVTLWYRAPE 189
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 77/164 (46%), Gaps = 19/164 (11%)
Query: 75 IGEGSYGRVY----YGILKSG--HAAAIKKLD--ASKQPDEEFLAQVSMVSRLKHE-NFV 125
+G G++G+V +GI K+ A+K L A+ ++++ ++ + H N V
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 126 QLLGYCVD-GTSRVLAYEFASNGSLHDILHGRKGVKGAQPGP------VLSWQQRVKIAV 178
LLG C G ++ EF G+L L ++ P L+ + + +
Sbjct: 96 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSF 155
Query: 179 GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSN 222
AKG+E+L A IHRD+ + N+L+ + +V KI DF L+
Sbjct: 156 QVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 196
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 83/191 (43%), Gaps = 21/191 (10%)
Query: 63 KEITENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQPDEEFLAQVS----MVS 117
K+ E+F ++GEGS+ V L + AIK L+ E + V+ ++S
Sbjct: 6 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 65
Query: 118 RLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIA 177
RL H FV+L D +A NG L + + RK + S+ +
Sbjct: 66 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRK---------IGSFDETCTRF 114
Query: 178 VGA--AKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTR 235
A LEYLH K IIHRD+K N+L+ +D +I DF + + + +
Sbjct: 115 YTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 171
Query: 236 VLGTFGYHAPE 246
+GT Y +PE
Sbjct: 172 FVGTAQYVSPE 182
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 83/191 (43%), Gaps = 21/191 (10%)
Query: 63 KEITENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQPDEEFLAQVS----MVS 117
K+ E+F ++GEGS+ V L + AIK L+ E + V+ ++S
Sbjct: 4 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 63
Query: 118 RLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIA 177
RL H FV+L D +A NG L + + RK + S+ +
Sbjct: 64 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRK---------IGSFDETCTRF 112
Query: 178 VGA--AKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTR 235
A LEYLH K IIHRD+K N+L+ +D +I DF + + + +
Sbjct: 113 YTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 169
Query: 236 VLGTFGYHAPE 246
+GT Y +PE
Sbjct: 170 FVGTAQYVSPE 180
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 81/187 (43%), Gaps = 21/187 (11%)
Query: 67 ENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQPDEEFLAQVS----MVSRLKH 121
E+F ++GEGS+ V L + AIK L+ E + V+ ++SRL H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGA- 180
FV+L D +A NG L + + RK + S+ + A
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRK---------IGSFDETCTRFYTAE 140
Query: 181 -AKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGT 239
LEYLH K IIHRD+K N+L+ +D +I DF + + + + +GT
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 240 FGYHAPE 246
Y +PE
Sbjct: 198 AQYVSPE 204
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 78/153 (50%), Gaps = 19/153 (12%)
Query: 75 IGEGSYGRV---YYGILKSGHAAAIKKL-DASKQP--DEEFLAQVSMVSRLKHENFVQLL 128
+G G++G V YY + K A+K L + + P +E LA+ +++ +L + V+++
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 129 GYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLH 188
G C + S +L E A G L+ L + VK + +++ + G++YL
Sbjct: 95 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---------KNIIELVHQVSMGMKYLE 144
Query: 189 EKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 221
E + +HRD+ + NVL+ AKI+DF LS
Sbjct: 145 ES---NFVHRDLAARNVLLVTQHYAKISDFGLS 174
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 78/153 (50%), Gaps = 19/153 (12%)
Query: 75 IGEGSYGRV---YYGILKSGHAAAIKKL-DASKQP--DEEFLAQVSMVSRLKHENFVQLL 128
+G G++G V YY + K A+K L + + P +E LA+ +++ +L + V+++
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 129 GYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLH 188
G C + S +L E A G L+ L + VK + +++ + G++YL
Sbjct: 95 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---------KNIIELVHQVSMGMKYLE 144
Query: 189 EKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 221
E + +HRD+ + NVL+ AKI+DF LS
Sbjct: 145 ES---NFVHRDLAARNVLLVTQHYAKISDFGLS 174
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 83/175 (47%), Gaps = 39/175 (22%)
Query: 68 NFGTNALIGEGSYGRVYYGILKSGHAA-----AIKKLDASKQPDEEFLAQVSMVSRLKHE 122
+F A++G+G++G+V +K+ +A AIKK+ +++ L++V +++ L H+
Sbjct: 7 DFEEIAVLGQGAFGQV----VKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQ 62
Query: 123 -------------NFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLS 169
NFV+ + ++ + E+ NG+L+D++H
Sbjct: 63 YVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLN---------- 112
Query: 170 WQQR---VKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 221
QQR ++ + L Y+H + IIHRD+K N+ I + KI DF L+
Sbjct: 113 -QQRDEYWRLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLA 163
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 83/191 (43%), Gaps = 21/191 (10%)
Query: 63 KEITENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQPDEEFLAQVS----MVS 117
K+ E+F ++GEGS+ V L + AIK L+ E + V+ ++S
Sbjct: 5 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 64
Query: 118 RLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIA 177
RL H FV+L D +A NG L + + RK + S+ +
Sbjct: 65 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRK---------IGSFDETCTRF 113
Query: 178 VGA--AKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTR 235
A LEYLH K IIHRD+K N+L+ +D +I DF + + + +
Sbjct: 114 YTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 170
Query: 236 VLGTFGYHAPE 246
+GT Y +PE
Sbjct: 171 FVGTAQYVSPE 181
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 81/187 (43%), Gaps = 21/187 (11%)
Query: 67 ENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQPDEEFLAQVS----MVSRLKH 121
E+F ++GEGS+ V L + AIK L+ E + V+ ++SRL H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGA- 180
FV+L D +A NG L + + RK + S+ + A
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRK---------IGSFDETCTRFYTAE 138
Query: 181 -AKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGT 239
LEYLH K IIHRD+K N+L+ +D +I DF + + + + +GT
Sbjct: 139 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 240 FGYHAPE 246
Y +PE
Sbjct: 196 AQYVSPE 202
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 84/201 (41%), Gaps = 29/201 (14%)
Query: 60 DELKEITENFGTNALIGEGSYGRVYYG--ILKSGHAAAIKKLDASKQPDEEFLAQVSMVS 117
D L + + A IGEG+YG+V+ + G A+K++ + L+ + V+
Sbjct: 4 DGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVA 63
Query: 118 RLKH------ENFVQLLGYC-VDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSW 170
L+H N V+L C V T R D+ V P P +
Sbjct: 64 VLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKV----PEPGVPT 119
Query: 171 QQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAAR 230
+ + +GL++LH ++HRD+K N+L+ K+ADF L AR
Sbjct: 120 ETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGL--------AR 168
Query: 231 LHS-----TRVLGTFGYHAPE 246
++S T V+ T Y APE
Sbjct: 169 IYSFQMALTSVVVTLWYRAPE 189
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 81/187 (43%), Gaps = 21/187 (11%)
Query: 67 ENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQPDEEFLAQVS----MVSRLKH 121
E+F ++GEGS+ V L + AIK L+ E + V+ ++SRL H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGA- 180
FV+L D +A NG L + + RK + S+ + A
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRK---------IGSFDETCTRFYTAE 141
Query: 181 -AKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGT 239
LEYLH K IIHRD+K N+L+ +D +I DF + + + + +GT
Sbjct: 142 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 198
Query: 240 FGYHAPE 246
Y +PE
Sbjct: 199 AQYVSPE 205
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 92/207 (44%), Gaps = 31/207 (14%)
Query: 53 EVPAISVDELK----EITENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQP-- 105
E P EL E+ E + + IG G+YG V K+G A+KKL Q
Sbjct: 9 ERPTFYRQELNKTIWEVPERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII 68
Query: 106 -DEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQP 164
+ ++ ++ +KHEN + LL V +R L EF ++ + H + GA
Sbjct: 69 HAKRTYRELRLLKHMKHENVIGLLD--VFTPARSLE-EF---NDVYLVTH----LMGADL 118
Query: 165 GPVLSWQQRVK-----IAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFD 219
++ Q+ + +GL+Y+H AD IIHRD+K SN+ + +D KI DF
Sbjct: 119 NNIVKCQKLTDDHVQFLIYQILRGLKYIH-SAD--IIHRDLKPSNLAVNEDXELKILDFG 175
Query: 220 LSNQAPDMAARLHSTRVLGTFGYHAPE 246
L+ D T + T Y APE
Sbjct: 176 LARHTDD-----EMTGYVATRWYRAPE 197
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 83/191 (43%), Gaps = 21/191 (10%)
Query: 63 KEITENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQPDEEFLAQVS----MVS 117
K+ E+F ++GEGS+ V L + AIK L+ E + V+ ++S
Sbjct: 3 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 62
Query: 118 RLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIA 177
RL H FV+L D +A NG L + + RK + S+ +
Sbjct: 63 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRK---------IGSFDETCTRF 111
Query: 178 VGA--AKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTR 235
A LEYLH K IIHRD+K N+L+ +D +I DF + + + +
Sbjct: 112 YTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 168
Query: 236 VLGTFGYHAPE 246
+GT Y +PE
Sbjct: 169 FVGTAQYVSPE 179
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 81/187 (43%), Gaps = 21/187 (11%)
Query: 67 ENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQPDEEFLAQVS----MVSRLKH 121
E+F ++GEGS+ V L + AIK L+ E + V+ ++SRL H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGA- 180
FV+L D +A NG L + + RK + S+ + A
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRK---------IGSFDETCTRFYTAE 140
Query: 181 -AKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGT 239
LEYLH K IIHRD+K N+L+ +D +I DF + + + + +GT
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 240 FGYHAPE 246
Y +PE
Sbjct: 198 AQYVSPE 204
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 81/187 (43%), Gaps = 21/187 (11%)
Query: 67 ENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQPDEEFLAQVS----MVSRLKH 121
E+F ++GEGS+ V L + AIK L+ E + V+ ++SRL H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGA- 180
FV+L D +A NG L + + RK + S+ + A
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRK---------IGSFDETCTRFYTAE 140
Query: 181 -AKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGT 239
LEYLH K IIHRD+K N+L+ +D +I DF + + + + +GT
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 240 FGYHAPE 246
Y +PE
Sbjct: 198 AQYVSPE 204
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 81/187 (43%), Gaps = 21/187 (11%)
Query: 67 ENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQPDEEFLAQVS----MVSRLKH 121
E+F ++GEGS+ V L + AIK L+ E + V+ ++SRL H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGA- 180
FV+L D +A NG L + + RK + S+ + A
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRK---------IGSFDETCTRFYTAE 141
Query: 181 -AKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGT 239
LEYLH K IIHRD+K N+L+ +D +I DF + + + + +GT
Sbjct: 142 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 198
Query: 240 FGYHAPE 246
Y +PE
Sbjct: 199 AQYVSPE 205
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 81/187 (43%), Gaps = 21/187 (11%)
Query: 67 ENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQPDEEFLAQVS----MVSRLKH 121
E+F ++GEGS+ V L + AIK L+ E + V+ ++SRL H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGA- 180
FV+L D +A NG L + + RK + S+ + A
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRK---------IGSFDETCTRFYTAE 138
Query: 181 -AKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGT 239
LEYLH K IIHRD+K N+L+ +D +I DF + + + + +GT
Sbjct: 139 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 240 FGYHAPE 246
Y +PE
Sbjct: 196 AQYVSPE 202
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 81/187 (43%), Gaps = 21/187 (11%)
Query: 67 ENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQPDEEFLAQVS----MVSRLKH 121
E+F ++GEGS+ V L + AIK L+ E + V+ ++SRL H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGA- 180
FV+L D +A NG L + + RK + S+ + A
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRK---------IGSFDETCTRFYTAE 140
Query: 181 -AKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGT 239
LEYLH K IIHRD+K N+L+ +D +I DF + + + + +GT
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 240 FGYHAPE 246
Y +PE
Sbjct: 198 AQYVSPE 204
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 96/216 (44%), Gaps = 27/216 (12%)
Query: 40 APKGAQAVKVQPIEVPAISVDELKEITENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKK 98
P+G+ + +P + E+ E + + +G G+YG V K+G A+KK
Sbjct: 15 VPRGSHMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKK 74
Query: 99 LDASKQP---DEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHG 155
L Q + ++ ++ +KHEN + LL V +R L EF ++ + H
Sbjct: 75 LSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD--VFTPARSLE-EF---NDVYLVTH- 127
Query: 156 RKGVKGAQPGPVLSWQQRVK-----IAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDD 210
+ GA ++ Q+ + +GL+Y+H AD IIHRD+K SN+ + +D
Sbjct: 128 ---LMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH-SAD--IIHRDLKPSNLAVNED 181
Query: 211 DVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
KI DF L+ D T + T Y APE
Sbjct: 182 CELKILDFGLARHTDD-----EMTGYVATRWYRAPE 212
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 81/187 (43%), Gaps = 21/187 (11%)
Query: 67 ENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQPDEEFLAQVS----MVSRLKH 121
E+F ++GEGS+ V L + AIK L+ E + V+ ++SRL H
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGA- 180
FV+L D +A NG L + + RK + S+ + A
Sbjct: 97 PFFVKLYFCFQDDEKLYFGLSYAKNGEL--LKYIRK---------IGSFDETCTRFYTAE 145
Query: 181 -AKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGT 239
LEYLH K IIHRD+K N+L+ +D +I DF + + + + +GT
Sbjct: 146 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 202
Query: 240 FGYHAPE 246
Y +PE
Sbjct: 203 AQYVSPE 209
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 81/187 (43%), Gaps = 21/187 (11%)
Query: 67 ENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQPDEEFLAQVS----MVSRLKH 121
E+F ++GEGS+ V L + AIK L+ E + V+ ++SRL H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGA- 180
FV+L D +A NG L + + RK + S+ + A
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGCL--LKYIRK---------IGSFDETCTRFYTAE 140
Query: 181 -AKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGT 239
LEYLH K IIHRD+K N+L+ +D +I DF + + + + +GT
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 197
Query: 240 FGYHAPE 246
Y +PE
Sbjct: 198 AQYVSPE 204
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 81/187 (43%), Gaps = 21/187 (11%)
Query: 67 ENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQPDEEFLAQVS----MVSRLKH 121
E+F ++GEGS+ V L + AIK L+ E + V+ ++SRL H
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 94
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGA- 180
FV+L D +A NG L + + RK + S+ + A
Sbjct: 95 PFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRK---------IGSFDETCTRFYTAE 143
Query: 181 -AKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGT 239
LEYLH K IIHRD+K N+L+ +D +I DF + + + + +GT
Sbjct: 144 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 200
Query: 240 FGYHAPE 246
Y +PE
Sbjct: 201 AQYVSPE 207
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 78/153 (50%), Gaps = 19/153 (12%)
Query: 75 IGEGSYGRV---YYGILKSGHAAAIKKL-DASKQP--DEEFLAQVSMVSRLKHENFVQLL 128
+G G++G V YY + K A+K L + + P +E LA+ +++ +L + V+++
Sbjct: 33 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 92
Query: 129 GYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLH 188
G C + S +L E A G L+ L + VK + +++ + G++YL
Sbjct: 93 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---------KNIIELVHQVSMGMKYLE 142
Query: 189 EKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 221
E + +HRD+ + NVL+ AKI+DF LS
Sbjct: 143 ES---NFVHRDLAARNVLLVTQHYAKISDFGLS 172
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 84/192 (43%), Gaps = 27/192 (14%)
Query: 64 EITENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQP---DEEFLAQVSMVSRL 119
E+ E + + +G G+YG V K+GH A+KKL Q + ++ ++ +
Sbjct: 15 EVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 74
Query: 120 KHENFVQLLGYCVDGTSR-----VLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 174
KHEN + LL S V L++I VK A+ L+
Sbjct: 75 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI------VKCAK----LTDDHVQ 124
Query: 175 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 234
+ +GL+Y+H AD IIHRD+K SN+ + +D KI DF L+ D T
Sbjct: 125 FLIYQILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMT 176
Query: 235 RVLGTFGYHAPE 246
+ T Y APE
Sbjct: 177 GYVATRWYRAPE 188
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 96/216 (44%), Gaps = 27/216 (12%)
Query: 40 APKGAQAVKVQPIEVPAISVDELKEITENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKK 98
P+G+ + +P + E+ E + + +G G+YG V K+G A+KK
Sbjct: 14 VPRGSHMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKK 73
Query: 99 LDASKQP---DEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHG 155
L Q + ++ ++ +KHEN + LL V +R L EF ++ + H
Sbjct: 74 LSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD--VFTPARSLE-EF---NDVYLVTH- 126
Query: 156 RKGVKGAQPGPVLSWQQRVK-----IAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDD 210
+ GA ++ Q+ + +GL+Y+H AD IIHRD+K SN+ + +D
Sbjct: 127 ---LMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH-SAD--IIHRDLKPSNLAVNED 180
Query: 211 DVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
KI DF L+ D T + T Y APE
Sbjct: 181 CELKILDFGLARHTDD-----EMTGYVATRWYRAPE 211
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 80/193 (41%), Gaps = 30/193 (15%)
Query: 65 ITENFGTNALIGEGSYGRVYYGILKSGHA----AAIKKLDASKQPDEEFLAQVSMVSRLK 120
++E + +G G+YG V K H I+K S + + L +V+++ L
Sbjct: 35 LSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLD 94
Query: 121 HENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGA 180
H N ++L + D + L E G L D + R ++
Sbjct: 95 HPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIK---------QV 145
Query: 181 AKGLEYLHEKADPHIIHRDIKSSNVLIFD---DDVAKIADFDLS----NQAPDMAARLHS 233
G+ YLH+ +I+HRD+K N+L+ D + KI DF LS NQ M R
Sbjct: 146 LSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKK-MKER--- 198
Query: 234 TRVLGTFGYHAPE 246
LGT Y APE
Sbjct: 199 ---LGTAYYIAPE 208
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 78/153 (50%), Gaps = 19/153 (12%)
Query: 75 IGEGSYGRV---YYGILKSGHAAAIKKL-DASKQP--DEEFLAQVSMVSRLKHENFVQLL 128
+G G++G V YY + K A+K L + + P +E LA+ +++ +L + V+++
Sbjct: 377 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 436
Query: 129 GYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLH 188
G C + S +L E A G L+ L + VK + +++ + G++YL
Sbjct: 437 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---------KNIIELVHQVSMGMKYLE 486
Query: 189 EKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 221
E + +HRD+ + NVL+ AKI+DF LS
Sbjct: 487 ES---NFVHRDLAARNVLLVTQHYAKISDFGLS 516
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 81/187 (43%), Gaps = 21/187 (11%)
Query: 67 ENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQPDEEFLAQVS----MVSRLKH 121
E+F ++GEGS+ V L + AIK L+ E + V+ ++SRL H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGA- 180
FV+L D +A NG L + + RK + S+ + A
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRK---------IGSFDETCTRFYTAE 140
Query: 181 -AKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGT 239
LEYLH K IIHRD+K N+L+ +D +I DF + + + + +GT
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 240 FGYHAPE 246
Y +PE
Sbjct: 198 AQYVSPE 204
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 92/207 (44%), Gaps = 31/207 (14%)
Query: 53 EVPAISVDELK----EITENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQP-- 105
E P EL E+ E + + +G G+YG V K+G A+KKL Q
Sbjct: 10 ERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII 69
Query: 106 -DEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQP 164
+ ++ ++ +KHEN + LL V +R L EF ++ + H + GA
Sbjct: 70 HAKRTYRELRLLKHMKHENVIGLLD--VFTPARSLE-EF---NDVYLVTH----LMGADL 119
Query: 165 GPVLSWQQRVK-----IAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFD 219
++ Q+ + +GL+Y+H AD IIHRD+K SN+ + +D KI DF
Sbjct: 120 NNIVKCQKLTDDHVQFLIYQILRGLKYIH-SAD--IIHRDLKPSNLAVNEDSELKILDFG 176
Query: 220 LSNQAPDMAARLHSTRVLGTFGYHAPE 246
L+ D T + T Y APE
Sbjct: 177 LARHTDD-----EMTGYVATRWYRAPE 198
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 78/153 (50%), Gaps = 19/153 (12%)
Query: 75 IGEGSYGRV---YYGILKSGHAAAIKKL-DASKQP--DEEFLAQVSMVSRLKHENFVQLL 128
+G G++G V YY + K A+K L + + P +E LA+ +++ +L + V+++
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 129 GYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLH 188
G C + S +L E A G L+ L + VK + +++ + G++YL
Sbjct: 79 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---------KNIIELVHQVSMGMKYLE 128
Query: 189 EKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 221
E + +HRD+ + NVL+ AKI+DF LS
Sbjct: 129 ES---NFVHRDLAARNVLLVTQHYAKISDFGLS 158
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 72/161 (44%), Gaps = 20/161 (12%)
Query: 66 TENFGTNALIGEGSYGRVYYGILKS--------GHAAAIKKLD-ASKQPDEEFLAQVSMV 116
E+ N +G+G++ +++ G+ + +K LD A + E F SM+
Sbjct: 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMM 66
Query: 117 SRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKI 176
S+L H++ V G CV G +L EF GSL L K + W ++++
Sbjct: 67 SKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCIN------ILW--KLEV 118
Query: 177 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIAD 217
A A + +L E +IH ++ + N+L+ ++ K +
Sbjct: 119 AKQLAAAMHFLEENT---LIHGNVCAKNILLIREEDRKTGN 156
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 92/207 (44%), Gaps = 31/207 (14%)
Query: 53 EVPAISVDELK----EITENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQP-- 105
E P EL E+ E + + +G G+YG V K+G A+KKL Q
Sbjct: 6 ERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII 65
Query: 106 -DEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQP 164
+ ++ ++ +KHEN + LL V +R L EF ++ + H + GA
Sbjct: 66 HAKRTYRELRLLKHMKHENVIGLLD--VFTPARSLE-EF---NDVYLVTH----LMGADL 115
Query: 165 GPVLSWQQRVK-----IAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFD 219
++ Q+ + +GL+Y+H AD IIHRD+K SN+ + +D KI DF
Sbjct: 116 NNIVKCQKLTDDHVQFLIYQILRGLKYIH-SAD--IIHRDLKPSNLAVNEDSELKILDFG 172
Query: 220 LSNQAPDMAARLHSTRVLGTFGYHAPE 246
L+ D T + T Y APE
Sbjct: 173 LARHTDD-----EMTGYVATRWYRAPE 194
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 78/153 (50%), Gaps = 19/153 (12%)
Query: 75 IGEGSYGRV---YYGILKSGHAAAIKKL-DASKQP--DEEFLAQVSMVSRLKHENFVQLL 128
+G G++G V YY + K A+K L + + P +E LA+ +++ +L + V+++
Sbjct: 378 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 437
Query: 129 GYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLH 188
G C + S +L E A G L+ L + VK + +++ + G++YL
Sbjct: 438 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---------KNIIELVHQVSMGMKYLE 487
Query: 189 EKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 221
E + +HRD+ + NVL+ AKI+DF LS
Sbjct: 488 ES---NFVHRDLAARNVLLVTQHYAKISDFGLS 517
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 81/187 (43%), Gaps = 21/187 (11%)
Query: 67 ENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQPDEEFLAQVS----MVSRLKH 121
E+F ++GEGS+ V L + AIK L+ E + V+ ++SRL H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGA- 180
FV+L D +A NG L + + RK + S+ + A
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRK---------IGSFDETCTRFYTAE 138
Query: 181 -AKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGT 239
LEYLH K IIHRD+K N+L+ +D +I DF + + + + +GT
Sbjct: 139 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGT 195
Query: 240 FGYHAPE 246
Y +PE
Sbjct: 196 AQYVSPE 202
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 78/153 (50%), Gaps = 19/153 (12%)
Query: 75 IGEGSYGRV---YYGILKSGHAAAIKKL-DASKQP--DEEFLAQVSMVSRLKHENFVQLL 128
+G G++G V YY + K A+K L + + P +E LA+ +++ +L + V+++
Sbjct: 25 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 84
Query: 129 GYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLH 188
G C + S +L E A G L+ L + VK + +++ + G++YL
Sbjct: 85 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---------KNIIELVHQVSMGMKYLE 134
Query: 189 EKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 221
E + +HRD+ + NVL+ AKI+DF LS
Sbjct: 135 ES---NFVHRDLAARNVLLVTQHYAKISDFGLS 164
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 78/153 (50%), Gaps = 19/153 (12%)
Query: 75 IGEGSYGRV---YYGILKSGHAAAIKKL-DASKQP--DEEFLAQVSMVSRLKHENFVQLL 128
+G G++G V YY + K A+K L + + P +E LA+ +++ +L + V+++
Sbjct: 13 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 72
Query: 129 GYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLH 188
G C + S +L E A G L+ L + VK + +++ + G++YL
Sbjct: 73 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---------KNIIELVHQVSMGMKYLE 122
Query: 189 EKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 221
E + +HRD+ + NVL+ AKI+DF LS
Sbjct: 123 ES---NFVHRDLAARNVLLVTQHYAKISDFGLS 152
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 92/207 (44%), Gaps = 31/207 (14%)
Query: 53 EVPAISVDELK----EITENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQP-- 105
E P EL E+ E + + +G G+YG V K+G A+KKL Q
Sbjct: 15 ERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII 74
Query: 106 -DEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQP 164
+ ++ ++ +KHEN + LL V +R L EF ++ + H + GA
Sbjct: 75 HAKRTYRELRLLKHMKHENVIGLLD--VFTPARSLE-EF---NDVYLVTH----LMGADL 124
Query: 165 GPVLSWQQRVK-----IAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFD 219
++ Q+ + +GL+Y+H AD IIHRD+K SN+ + +D KI DF
Sbjct: 125 NNIVKCQKLTDDHVQFLIYQILRGLKYIH-SAD--IIHRDLKPSNLAVNEDXELKILDFG 181
Query: 220 LSNQAPDMAARLHSTRVLGTFGYHAPE 246
L+ D T + T Y APE
Sbjct: 182 LARHTDD-----EMTGYVATRWYRAPE 203
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 78/153 (50%), Gaps = 19/153 (12%)
Query: 75 IGEGSYGRV---YYGILKSGHAAAIKKL-DASKQP--DEEFLAQVSMVSRLKHENFVQLL 128
+G G++G V YY + K A+K L + + P +E LA+ +++ +L + V+++
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 129 GYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLH 188
G C + S +L E A G L+ L + VK + +++ + G++YL
Sbjct: 79 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---------KNIIELVHQVSMGMKYLE 128
Query: 189 EKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 221
E + +HRD+ + NVL+ AKI+DF LS
Sbjct: 129 ES---NFVHRDLAARNVLLVTQHYAKISDFGLS 158
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 77/185 (41%), Gaps = 17/185 (9%)
Query: 67 ENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQPDEEFLAQVS----MVSRLKH 121
E+F ++GEGS+ V L + AIK L+ E + V+ ++SRL H
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 73
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAA 181
FV+L D +A NG L + + G R A
Sbjct: 74 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR--------KIGSFDETCTRFYTA-EIV 124
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 241
LEYLH K IIHRD+K N+L+ +D +I DF + + + + +GT
Sbjct: 125 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 181
Query: 242 YHAPE 246
Y +PE
Sbjct: 182 YVSPE 186
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 78/153 (50%), Gaps = 19/153 (12%)
Query: 75 IGEGSYGRV---YYGILKSGHAAAIKKL-DASKQP--DEEFLAQVSMVSRLKHENFVQLL 128
+G G++G V YY + K A+K L + + P +E LA+ +++ +L + V+++
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 74
Query: 129 GYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLH 188
G C + S +L E A G L+ L + VK + +++ + G++YL
Sbjct: 75 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---------KNIIELVHQVSMGMKYLE 124
Query: 189 EKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 221
E + +HRD+ + NVL+ AKI+DF LS
Sbjct: 125 ES---NFVHRDLAARNVLLVTQHYAKISDFGLS 154
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 77/185 (41%), Gaps = 17/185 (9%)
Query: 67 ENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQPDEEFLAQVS----MVSRLKH 121
E+F ++GEGS+ V L + AIK L+ E + V+ ++SRL H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAA 181
FV+L D +A NG L + + G R A
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR--------KIGSFDETCTRFYTA-EIV 139
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 241
LEYLH K IIHRD+K N+L+ +D +I DF + + + + +GT
Sbjct: 140 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 196
Query: 242 YHAPE 246
Y +PE
Sbjct: 197 YVSPE 201
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 92/207 (44%), Gaps = 31/207 (14%)
Query: 53 EVPAISVDELK----EITENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQP-- 105
E P EL E+ E + + +G G+YG V K+G A+KKL Q
Sbjct: 9 ERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII 68
Query: 106 -DEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQP 164
+ ++ ++ +KHEN + LL V +R L EF ++ + H + GA
Sbjct: 69 HAKRTYRELRLLKHMKHENVIGLLD--VFTPARSLE-EF---NDVYLVTH----LMGADL 118
Query: 165 GPVLSWQQRVK-----IAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFD 219
++ Q+ + +GL+Y+H AD IIHRD+K SN+ + +D KI DF
Sbjct: 119 NNIVKCQKLTDDHVQFLIYQILRGLKYIH-SAD--IIHRDLKPSNLAVNEDXELKILDFG 175
Query: 220 LSNQAPDMAARLHSTRVLGTFGYHAPE 246
L+ D T + T Y APE
Sbjct: 176 LARHTDD-----EMTGYVATRWYRAPE 197
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 77/185 (41%), Gaps = 17/185 (9%)
Query: 67 ENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQPDEEFLAQVS----MVSRLKH 121
E+F ++GEGS+ V L + AIK L+ E + V+ ++SRL H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAA 181
FV+L D +A NG L + + G R A
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR--------KIGSFDETCTRFYTA-EIV 139
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 241
LEYLH K IIHRD+K N+L+ +D +I DF + + + + +GT
Sbjct: 140 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQ 196
Query: 242 YHAPE 246
Y +PE
Sbjct: 197 YVSPE 201
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 92/207 (44%), Gaps = 31/207 (14%)
Query: 53 EVPAISVDELK----EITENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQP-- 105
E P EL E+ E + + +G G+YG V K+G A+KKL Q
Sbjct: 4 ERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII 63
Query: 106 -DEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQP 164
+ ++ ++ +KHEN + LL V +R L EF ++ + H + GA
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLD--VFTPARSLE-EF---NDVYLVTH----LMGADL 113
Query: 165 GPVLSWQQRVK-----IAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFD 219
++ Q+ + +GL+Y+H AD IIHRD+K SN+ + +D KI DF
Sbjct: 114 NNIVKXQKLTDDHVQFLIYQILRGLKYIH-SAD--IIHRDLKPSNLAVNEDXELKILDFG 170
Query: 220 LSNQAPDMAARLHSTRVLGTFGYHAPE 246
L+ D T + T Y APE
Sbjct: 171 LARHTDD-----EMTGYVATRWYRAPE 192
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 80/191 (41%), Gaps = 35/191 (18%)
Query: 75 IGEGSYGRVYYGILKSGHA-AAIK-----KLDASKQPD---------EEFLAQVSMVSRL 119
+G G+YG V K+GH+ AIK + D + D EE ++S++ L
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL 103
Query: 120 KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVG 179
H N ++L D L EF G L + + R ++
Sbjct: 104 DHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMK---------Q 154
Query: 180 AAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDV---AKIADFDLSN-QAPDMAARLHSTR 235
G+ YLH+ +I+HRDIK N+L+ + + KI DF LS+ + D R
Sbjct: 155 ILSGICYLHK---HNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDR--- 208
Query: 236 VLGTFGYHAPE 246
LGT Y APE
Sbjct: 209 -LGTAYYIAPE 218
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 92/207 (44%), Gaps = 31/207 (14%)
Query: 53 EVPAISVDELK----EITENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQP-- 105
E P EL E+ E + + +G G+YG V K+G A+KKL Q
Sbjct: 11 ERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII 70
Query: 106 -DEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQP 164
+ ++ ++ +KHEN + LL V +R L EF ++ + H + GA
Sbjct: 71 HAKRTYRELRLLKHMKHENVIGLLD--VFTPARSLE-EF---NDVYLVTH----LMGADL 120
Query: 165 GPVLSWQQRVK-----IAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFD 219
++ Q+ + +GL+Y+H AD IIHRD+K SN+ + +D KI DF
Sbjct: 121 NNIVKCQKLTDDHVQFLIYQILRGLKYIH-SAD--IIHRDLKPSNLAVNEDCELKILDFG 177
Query: 220 LSNQAPDMAARLHSTRVLGTFGYHAPE 246
L+ D T + T Y APE
Sbjct: 178 LARHTAD-----EMTGYVATRWYRAPE 199
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 72/157 (45%), Gaps = 16/157 (10%)
Query: 75 IGEG--SYGRVYYGILKSGHAAAIKKLDASKQPD-EEFLAQVSMVSRLKHENFVQLLGYC 131
+GEG SY + G L GH A+K++ +Q D EE + M H N ++L+ YC
Sbjct: 37 LGEGGFSYVDLVEG-LHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYC 95
Query: 132 VDGT----SRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYL 187
+ L F G+L + + K G L+ Q + + +G +GLE +
Sbjct: 96 LRERGAKHEAWLLLPFFKRGTLWNEIERLK-----DKGNFLTEDQILWLLLGICRGLEAI 150
Query: 188 HEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQA 224
H K HRD+K +N+L+ D+ + D NQA
Sbjct: 151 HAKG---YAHRDLKPTNILLGDEGQPVLMDLGSMNQA 184
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 99/231 (42%), Gaps = 42/231 (18%)
Query: 29 GTDGAYHASEAAPKGAQAVKVQPIEVPAISVDELK----EITENFGTNALIGEGSYGRVY 84
GT+ Y S A+ E P EL E+ E + + +G G+YG V
Sbjct: 14 GTENLYFQSNASQ-----------ERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVC 62
Query: 85 YGI-LKSGHAAAIKKLDASKQP---DEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLA 140
K+G A+KKL Q + ++ ++ +KHEN + LL V +R L
Sbjct: 63 AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD--VFTPARSLE 120
Query: 141 YEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVK-----IAVGAAKGLEYLHEKADPHI 195
EF ++ + H + GA ++ Q+ + +GL+Y+H AD I
Sbjct: 121 -EF---NDVYLVTH----LMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH-SAD--I 169
Query: 196 IHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
IHRD+K SN+ + +D KI DF L+ D +TR Y APE
Sbjct: 170 IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVATR-----WYRAPE 215
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 89/204 (43%), Gaps = 21/204 (10%)
Query: 47 VKVQPIEVPAISVDELKEITENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDAS--K 103
+K+ P + + ++LK++ E IG G+YG V + K SG A+K++ ++ +
Sbjct: 9 LKISPEQHWDFTAEDLKDLGE-------IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDE 61
Query: 104 QPDEEFLAQVSMVSRLKHENF-VQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGA 162
+ ++ L + +V R + VQ G + E S + +
Sbjct: 62 KEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDV 121
Query: 163 QPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSN 222
P +L KI + K L +L E IIHRDIK SN+L+ K+ DF +S
Sbjct: 122 IPEEILG-----KITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISG 174
Query: 223 QAPDMAARLHSTRVLGTFGYHAPE 246
Q D A+ TR G Y APE
Sbjct: 175 QLVDSIAK---TRDAGCRPYMAPE 195
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 92/207 (44%), Gaps = 31/207 (14%)
Query: 53 EVPAISVDELK----EITENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQP-- 105
E P EL E+ E + + +G G+YG V K+G A+KKL Q
Sbjct: 11 ERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII 70
Query: 106 -DEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQP 164
+ ++ ++ +KHEN + LL V +R L EF ++ + H + GA
Sbjct: 71 HAKRTYRELRLLKHMKHENVIGLLD--VFTPARSLE-EF---NDVYLVTH----LMGADL 120
Query: 165 GPVLSWQQRVK-----IAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFD 219
++ Q+ + +GL+Y+H AD IIHRD+K SN+ + +D KI DF
Sbjct: 121 NNIVKCQKLTDDHVQFLIYQILRGLKYIH-SAD--IIHRDLKPSNLAVNEDCELKILDFG 177
Query: 220 LSNQAPDMAARLHSTRVLGTFGYHAPE 246
L+ D T + T Y APE
Sbjct: 178 LARHTAD-----EMTGYVATRWYRAPE 199
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 92/207 (44%), Gaps = 31/207 (14%)
Query: 53 EVPAISVDELK----EITENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQP-- 105
E P EL E+ E + + +G G+YG V K+G A+KKL Q
Sbjct: 11 ERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII 70
Query: 106 -DEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQP 164
+ ++ ++ +KHEN + LL V +R L EF ++ + H + GA
Sbjct: 71 HAKRTYRELRLLKHMKHENVIGLLD--VFTPARSLE-EF---NDVYLVTH----LMGADL 120
Query: 165 GPVLSWQQRVK-----IAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFD 219
++ Q+ + +GL+Y+H AD IIHRD+K SN+ + +D KI DF
Sbjct: 121 NNIVKCQKLTDDHVQFLIYQILRGLKYIH-SAD--IIHRDLKPSNLAVNEDCELKILDFG 177
Query: 220 LSNQAPDMAARLHSTRVLGTFGYHAPE 246
L+ D T + T Y APE
Sbjct: 178 LARHTAD-----EMTGYVATRWYRAPE 199
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 92/207 (44%), Gaps = 31/207 (14%)
Query: 53 EVPAISVDELK----EITENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQP-- 105
E P EL E+ E + + +G G+YG V K+G A+KKL Q
Sbjct: 4 ERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII 63
Query: 106 -DEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQP 164
+ ++ ++ +KHEN + LL V +R L EF ++ + H + GA
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLD--VFTPARSLE-EF---NDVYLVTH----LMGADL 113
Query: 165 GPVLSWQQRVK-----IAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFD 219
++ Q+ + +GL+Y+H AD IIHRD+K SN+ + +D KI DF
Sbjct: 114 NNIVKCQKLTDDHVQFLIYQILRGLKYIH-SAD--IIHRDLKPSNLAVNEDCELKILDFG 170
Query: 220 LSNQAPDMAARLHSTRVLGTFGYHAPE 246
L+ D T + T Y APE
Sbjct: 171 LARHTDD-----EMTGYVATRWYRAPE 192
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 92/207 (44%), Gaps = 31/207 (14%)
Query: 53 EVPAISVDELK----EITENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQP-- 105
E P EL E+ E + + +G G+YG V K+G A+KKL Q
Sbjct: 10 ERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII 69
Query: 106 -DEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQP 164
+ ++ ++ +KHEN + LL V +R L EF ++ + H + GA
Sbjct: 70 HAKRTYRELRLLKHMKHENVIGLLD--VFTPARSLE-EF---NDVYLVTH----LMGADL 119
Query: 165 GPVLSWQQRVK-----IAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFD 219
++ Q+ + +GL+Y+H AD IIHRD+K SN+ + +D KI DF
Sbjct: 120 NNIVKCQKLTDDHVQFLIYQILRGLKYIH-SAD--IIHRDLKPSNLAVNEDCELKILDFG 176
Query: 220 LSNQAPDMAARLHSTRVLGTFGYHAPE 246
L+ D T + T Y APE
Sbjct: 177 LARHTDD-----EMTGYVATRWYRAPE 198
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 92/207 (44%), Gaps = 31/207 (14%)
Query: 53 EVPAISVDELK----EITENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQP-- 105
E P EL E+ E + + +G G+YG V K+G A+KKL Q
Sbjct: 15 ERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII 74
Query: 106 -DEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQP 164
+ ++ ++ +KHEN + LL V +R L EF ++ + H + GA
Sbjct: 75 HAKRTYRELRLLKHMKHENVIGLLD--VFTPARSLE-EF---NDVYLVTH----LMGADL 124
Query: 165 GPVLSWQQRVK-----IAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFD 219
++ Q+ + +GL+Y+H AD IIHRD+K SN+ + +D KI DF
Sbjct: 125 NNIVKCQKLTDDHVQFLIYQILRGLKYIH-SAD--IIHRDLKPSNLAVNEDCELKILDFG 181
Query: 220 LSNQAPDMAARLHSTRVLGTFGYHAPE 246
L+ D T + T Y APE
Sbjct: 182 LARHTDD-----EMTGYVATRWYRAPE 203
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 92/207 (44%), Gaps = 31/207 (14%)
Query: 53 EVPAISVDELK----EITENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQP-- 105
E P EL E+ E + + +G G+YG V K+G A+KKL Q
Sbjct: 6 ERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII 65
Query: 106 -DEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQP 164
+ ++ ++ +KHEN + LL V +R L EF ++ + H + GA
Sbjct: 66 HAKRTYRELRLLKHMKHENVIGLLD--VFTPARSLE-EF---NDVYLVTH----LMGADL 115
Query: 165 GPVLSWQQRVK-----IAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFD 219
++ Q+ + +GL+Y+H AD IIHRD+K SN+ + +D KI DF
Sbjct: 116 NNIVKCQKLTDDHVQFLIYQILRGLKYIH-SAD--IIHRDLKPSNLAVNEDCELKILDFG 172
Query: 220 LSNQAPDMAARLHSTRVLGTFGYHAPE 246
L+ D T + T Y APE
Sbjct: 173 LARHTDD-----EMTGYVATRWYRAPE 194
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 92/207 (44%), Gaps = 31/207 (14%)
Query: 53 EVPAISVDELK----EITENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQP-- 105
E P EL E+ E + + +G G+YG V K+G A+KKL Q
Sbjct: 6 ERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII 65
Query: 106 -DEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQP 164
+ ++ ++ +KHEN + LL V +R L EF ++ + H + GA
Sbjct: 66 HAKRTYRELRLLKHMKHENVIGLLD--VFTPARSLE-EF---NDVYLVTH----LMGADL 115
Query: 165 GPVLSWQQRVK-----IAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFD 219
++ Q+ + +GL+Y+H AD IIHRD+K SN+ + +D KI DF
Sbjct: 116 NNIVKCQKLTDDHVQFLIYQILRGLKYIH-SAD--IIHRDLKPSNLAVNEDCELKILDFG 172
Query: 220 LSNQAPDMAARLHSTRVLGTFGYHAPE 246
L+ D T + T Y APE
Sbjct: 173 LARHTDD-----EMTGYVATRWYRAPE 194
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 92/207 (44%), Gaps = 31/207 (14%)
Query: 53 EVPAISVDELK----EITENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQP-- 105
E P EL E+ E + + +G G+YG V K+G A+KKL Q
Sbjct: 16 ERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSII 75
Query: 106 -DEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQP 164
+ ++ ++ +KHEN + LL V +R L EF ++ + H + GA
Sbjct: 76 HAKRTYRELRLLKHMKHENVIGLLD--VFTPARSLE-EF---NDVYLVTH----LMGADL 125
Query: 165 GPVLSWQQRVK-----IAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFD 219
++ Q+ + +GL+Y+H AD IIHRD+K SN+ + +D KI DF
Sbjct: 126 NNIVKCQKLTDDHVQFLIYQILRGLKYIH-SAD--IIHRDLKPSNLAVNEDCELKILDFG 182
Query: 220 LSNQAPDMAARLHSTRVLGTFGYHAPE 246
L+ D T + T Y APE
Sbjct: 183 LARHTDD-----EMTGYVATRWYRAPE 204
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 92/207 (44%), Gaps = 31/207 (14%)
Query: 53 EVPAISVDELK----EITENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQP-- 105
E P EL E+ E + + +G G+YG V K+G A+KKL Q
Sbjct: 11 ERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII 70
Query: 106 -DEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQP 164
+ ++ ++ +KHEN + LL V +R L EF ++ + H + GA
Sbjct: 71 HAKRTYRELRLLKHMKHENVIGLLD--VFTPARSLE-EF---NDVYLVTH----LMGADL 120
Query: 165 GPVLSWQQRVK-----IAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFD 219
++ Q+ + +GL+Y+H AD IIHRD+K SN+ + +D KI DF
Sbjct: 121 NNIVKCQKLTDDHVQFLIYQILRGLKYIH-SAD--IIHRDLKPSNLAVNEDCELKILDFG 177
Query: 220 LSNQAPDMAARLHSTRVLGTFGYHAPE 246
L+ D T + T Y APE
Sbjct: 178 LARHTDD-----EMTGYVATRWYRAPE 199
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 92/207 (44%), Gaps = 31/207 (14%)
Query: 53 EVPAISVDELK----EITENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQP-- 105
E P EL E+ E + + +G G+YG V K+G A+KKL Q
Sbjct: 6 ERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII 65
Query: 106 -DEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQP 164
+ ++ ++ +KHEN + LL V +R L EF ++ + H + GA
Sbjct: 66 HAKRTYRELRLLKHMKHENVIGLLD--VFTPARSLE-EF---NDVYLVTH----LMGADL 115
Query: 165 GPVLSWQQRVK-----IAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFD 219
++ Q+ + +GL+Y+H AD IIHRD+K SN+ + +D KI DF
Sbjct: 116 NNIVKCQKLTDDHVQFLIYQILRGLKYIH-SAD--IIHRDLKPSNLAVNEDCELKILDFG 172
Query: 220 LSNQAPDMAARLHSTRVLGTFGYHAPE 246
L+ D T + T Y APE
Sbjct: 173 LARHTDD-----EMTGYVATRWYRAPE 194
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 88/192 (45%), Gaps = 27/192 (14%)
Query: 64 EITENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQP---DEEFLAQVSMVSRL 119
E+ E + + +G G+YG V K+G A+KKL Q + ++ ++ +
Sbjct: 17 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 76
Query: 120 KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVK---- 175
KHEN + LL V +R L EF ++ + H + GA ++ Q+
Sbjct: 77 KHENVIGLLD--VFTPARSLE-EF---NDVYLVTH----LMGADLNNIVKCQKLTDDHVQ 126
Query: 176 -IAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 234
+ +GL+Y+H AD IIHRD+K SN+ + +D KI DF L+ D T
Sbjct: 127 FLIYQILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMT 178
Query: 235 RVLGTFGYHAPE 246
+ T Y APE
Sbjct: 179 GYVATRWYRAPE 190
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 83/187 (44%), Gaps = 30/187 (16%)
Query: 75 IGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCV-D 133
+G+G YG V+ G + G A+K + + ++ L+HEN +LG+ D
Sbjct: 45 VGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFRETELYNTVMLRHEN---ILGFIASD 100
Query: 134 GTSR------VLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYL 187
TSR L + GSL+D L L ++I + A GL +L
Sbjct: 101 MTSRHSSTQLWLITHYHEMGSLYDYLQL----------TTLDTVSCLRIVLSIASGLAHL 150
Query: 188 H-----EKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS---NQAPDMAARLHSTRVLGT 239
H + P I HRD+KS N+L+ + IAD L+ +Q+ + ++ RV GT
Sbjct: 151 HIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-GT 209
Query: 240 FGYHAPE 246
Y APE
Sbjct: 210 KRYMAPE 216
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 92/207 (44%), Gaps = 31/207 (14%)
Query: 53 EVPAISVDELK----EITENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQP-- 105
E P EL E+ E + + +G G+YG V K+G A+KKL Q
Sbjct: 16 ERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII 75
Query: 106 -DEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQP 164
+ ++ ++ +KHEN + LL V +R L EF ++ + H + GA
Sbjct: 76 HAKRTYRELRLLKHMKHENVIGLLD--VFTPARSLE-EF---NDVYLVTH----LMGADL 125
Query: 165 GPVLSWQQRVK-----IAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFD 219
++ Q+ + +GL+Y+H AD IIHRD+K SN+ + +D KI DF
Sbjct: 126 NNIVKCQKLTDDHVQFLIYQILRGLKYIH-SAD--IIHRDLKPSNLAVNEDCELKILDFG 182
Query: 220 LSNQAPDMAARLHSTRVLGTFGYHAPE 246
L+ D T + T Y APE
Sbjct: 183 LARHTDD-----EMTGYVATRWYRAPE 204
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 92/207 (44%), Gaps = 31/207 (14%)
Query: 53 EVPAISVDELK----EITENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQP-- 105
E P EL E+ E + + +G G+YG V K+G A+KKL Q
Sbjct: 16 ERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII 75
Query: 106 -DEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQP 164
+ ++ ++ +KHEN + LL V +R L EF ++ + H + GA
Sbjct: 76 HAKRTYRELRLLKHMKHENVIGLLD--VFTPARSLE-EF---NDVYLVTH----LMGADL 125
Query: 165 GPVLSWQQRVK-----IAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFD 219
++ Q+ + +GL+Y+H AD IIHRD+K SN+ + +D KI DF
Sbjct: 126 NNIVKCQKLTDDHVQFLIYQILRGLKYIH-SAD--IIHRDLKPSNLAVNEDCELKILDFG 182
Query: 220 LSNQAPDMAARLHSTRVLGTFGYHAPE 246
L+ D T + T Y APE
Sbjct: 183 LARHTDD-----EMTGYVATRWYRAPE 204
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 92/207 (44%), Gaps = 31/207 (14%)
Query: 53 EVPAISVDELK----EITENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQP-- 105
E P EL E+ E + + +G G+YG V K+G A+KKL Q
Sbjct: 1 ERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII 60
Query: 106 -DEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQP 164
+ ++ ++ +KHEN + LL V +R L EF ++ + H + GA
Sbjct: 61 HAKRTYRELRLLKHMKHENVIGLLD--VFTPARSLE-EF---NDVYLVTH----LMGADL 110
Query: 165 GPVLSWQQRVK-----IAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFD 219
++ Q+ + +GL+Y+H AD IIHRD+K SN+ + +D KI DF
Sbjct: 111 NNIVKCQKLTDDHVQFLIYQILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFG 167
Query: 220 LSNQAPDMAARLHSTRVLGTFGYHAPE 246
L+ D T + T Y APE
Sbjct: 168 LARHTDD-----EMTGYVATRWYRAPE 189
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 92/207 (44%), Gaps = 31/207 (14%)
Query: 53 EVPAISVDELK----EITENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQP-- 105
E P EL E+ E + + +G G+YG V K+G A+KKL Q
Sbjct: 4 ERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII 63
Query: 106 -DEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQP 164
+ ++ ++ +KHEN + LL V +R L EF ++ + H + GA
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLD--VFTPARSLE-EF---NDVYLVTH----LMGADL 113
Query: 165 GPVLSWQQRVK-----IAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFD 219
++ Q+ + +GL+Y+H AD IIHRD+K SN+ + +D KI DF
Sbjct: 114 NNIVKCQKLTDDHVQFLIYQILRGLKYIH-SAD--IIHRDLKPSNLAVNEDCELKILDFG 170
Query: 220 LSNQAPDMAARLHSTRVLGTFGYHAPE 246
L+ D T + T Y APE
Sbjct: 171 LARHTDD-----EMTGYVATRWYRAPE 192
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 92/207 (44%), Gaps = 31/207 (14%)
Query: 53 EVPAISVDELK----EITENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQP-- 105
E P EL E+ E + + +G G+YG V K+G A+KKL Q
Sbjct: 9 ERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII 68
Query: 106 -DEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQP 164
+ ++ ++ +KHEN + LL V +R L EF ++ + H + GA
Sbjct: 69 HAKRTYRELRLLKHMKHENVIGLLD--VFTPARSLE-EF---NDVYLVTH----LMGADL 118
Query: 165 GPVLSWQQRVK-----IAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFD 219
++ Q+ + +GL+Y+H AD IIHRD+K SN+ + +D KI DF
Sbjct: 119 NNIVKCQKLTDDHVQFLIYQILRGLKYIH-SAD--IIHRDLKPSNLAVNEDCELKILDFG 175
Query: 220 LSNQAPDMAARLHSTRVLGTFGYHAPE 246
L+ D T + T Y APE
Sbjct: 176 LARHTDD-----EMTGYVATRWYRAPE 197
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 92/207 (44%), Gaps = 31/207 (14%)
Query: 53 EVPAISVDELK----EITENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQP-- 105
E P EL E+ E + + +G G+YG V K+G A+KKL Q
Sbjct: 3 ERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII 62
Query: 106 -DEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQP 164
+ ++ ++ +KHEN + LL V +R L EF ++ + H + GA
Sbjct: 63 HAKRTYRELRLLKHMKHENVIGLLD--VFTPARSLE-EF---NDVYLVTH----LMGADL 112
Query: 165 GPVLSWQQRVK-----IAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFD 219
++ Q+ + +GL+Y+H AD IIHRD+K SN+ + +D KI DF
Sbjct: 113 NNIVKCQKLTDDHVQFLIYQILRGLKYIH-SAD--IIHRDLKPSNLAVNEDCELKILDFG 169
Query: 220 LSNQAPDMAARLHSTRVLGTFGYHAPE 246
L+ D T + T Y APE
Sbjct: 170 LARHTDD-----EMTGYVATRWYRAPE 191
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 92/207 (44%), Gaps = 31/207 (14%)
Query: 53 EVPAISVDELK----EITENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQP-- 105
E P EL E+ E + + +G G+YG V K+G A+KKL Q
Sbjct: 4 ERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII 63
Query: 106 -DEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQP 164
+ ++ ++ +KHEN + LL V +R L EF ++ + H + GA
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLD--VFTPARSLE-EF---NDVYLVTH----LMGADL 113
Query: 165 GPVLSWQQRVK-----IAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFD 219
++ Q+ + +GL+Y+H AD IIHRD+K SN+ + +D KI DF
Sbjct: 114 NNIVKCQKLTDDHVQFLIYQILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFG 170
Query: 220 LSNQAPDMAARLHSTRVLGTFGYHAPE 246
L+ D T + T Y APE
Sbjct: 171 LARHTDD-----EMTGXVATRWYRAPE 192
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 88/192 (45%), Gaps = 27/192 (14%)
Query: 64 EITENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQP---DEEFLAQVSMVSRL 119
E+ E + + +G G+YG V K+G A+KKL Q + ++ ++ +
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 120 KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVK---- 175
KHEN + LL V +R L EF ++ + H + GA ++ Q+
Sbjct: 79 KHENVIGLLD--VFTPARSLE-EF---NDVYLVTH----LMGADLNNIVKCQKLTDDHVQ 128
Query: 176 -IAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 234
+ +GL+Y+H AD IIHRD+K SN+ + +D KI DF L+ D T
Sbjct: 129 FLIYQILRGLKYIH-SAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMT 180
Query: 235 RVLGTFGYHAPE 246
+ T Y APE
Sbjct: 181 GYVATRWYRAPE 192
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 91/207 (43%), Gaps = 31/207 (14%)
Query: 53 EVPAISVDELK----EITENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQP-- 105
E P EL E+ E + + +G G+YG V K+G A+KKL Q
Sbjct: 4 ERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII 63
Query: 106 -DEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQP 164
+ ++ ++ +KHEN + LL V +R L EF ++ + H + GA
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLD--VFTPARSLE-EF---NDVYLVTH----LMGADL 113
Query: 165 GPVLSWQQRVK-----IAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFD 219
++ Q+ + +GL+Y+H AD IIHRD+K SN+ + +D KI DF
Sbjct: 114 NNIVKSQKLTDDHVQFLIYQILRGLKYIH-SAD--IIHRDLKPSNLAVNEDSELKILDFG 170
Query: 220 LSNQAPDMAARLHSTRVLGTFGYHAPE 246
L D T + T Y APE
Sbjct: 171 LCRHTDD-----EMTGYVATRWYRAPE 192
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 92/207 (44%), Gaps = 31/207 (14%)
Query: 53 EVPAISVDELK----EITENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQP-- 105
E P EL E+ E + + +G G+YG V K+G A+KKL Q
Sbjct: 4 ERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII 63
Query: 106 -DEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQP 164
+ ++ ++ +KHEN + LL V +R L EF ++ + H + GA
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLD--VFTPARSLE-EF---NDVYLVTH----LMGADL 113
Query: 165 GPVLSWQQRVK-----IAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFD 219
++ Q+ + +GL+Y+H AD IIHRD+K SN+ + +D KI DF
Sbjct: 114 NNIVKCQKLTDDHVQFLIYQILRGLKYIH-SAD--IIHRDLKPSNLAVNEDCELKILDFG 170
Query: 220 LSNQAPDMAARLHSTRVLGTFGYHAPE 246
L+ D T + T Y APE
Sbjct: 171 LARHTDD-----EMTGYVATRWYRAPE 192
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 92/207 (44%), Gaps = 31/207 (14%)
Query: 53 EVPAISVDELK----EITENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQP-- 105
E P EL E+ E + + +G G+YG V K+G A+KKL Q
Sbjct: 4 ERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII 63
Query: 106 -DEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQP 164
+ ++ ++ +KHEN + LL V +R L EF ++ + H + GA
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLD--VFTPARSLE-EF---NDVYLVTH----LMGADL 113
Query: 165 GPVLSWQQRVK-----IAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFD 219
++ Q+ + +GL+Y+H AD IIHRD+K SN+ + +D KI DF
Sbjct: 114 NNIVKCQKLTDDHVQFLIYQILRGLKYIH-SAD--IIHRDLKPSNLAVNEDCELKILDFG 170
Query: 220 LSNQAPDMAARLHSTRVLGTFGYHAPE 246
L+ D T + T Y APE
Sbjct: 171 LARHTDD-----EMTGYVATRWYRAPE 192
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 92/207 (44%), Gaps = 31/207 (14%)
Query: 53 EVPAISVDELK----EITENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQP-- 105
E P EL E+ E + + +G G+YG V K+G A+KKL Q
Sbjct: 10 ERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII 69
Query: 106 -DEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQP 164
+ ++ ++ +KHEN + LL V +R L EF ++ + H + GA
Sbjct: 70 HAKRTYRELRLLKHMKHENVIGLLD--VFTPARSLE-EF---NDVYLVTH----LMGADL 119
Query: 165 GPVLSWQQRVK-----IAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFD 219
++ Q+ + +GL+Y+H AD IIHRD+K SN+ + +D KI DF
Sbjct: 120 NNIVKCQKLTDDHVQFLIYQILRGLKYIH-SAD--IIHRDLKPSNLAVNEDCELKILDFG 176
Query: 220 LSNQAPDMAARLHSTRVLGTFGYHAPE 246
L+ D T + T Y APE
Sbjct: 177 LARHTDD-----EMTGYVATRWYRAPE 198
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 92/207 (44%), Gaps = 31/207 (14%)
Query: 53 EVPAISVDELK----EITENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQP-- 105
E P EL E+ E + + +G G+YG V K+G A+KKL Q
Sbjct: 4 ERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII 63
Query: 106 -DEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQP 164
+ ++ ++ +KHEN + LL V +R L EF ++ + H + GA
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLD--VFTPARSLE-EF---NDVYLVTH----LMGADL 113
Query: 165 GPVLSWQQRVK-----IAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFD 219
++ Q+ + +GL+Y+H AD IIHRD+K SN+ + +D KI DF
Sbjct: 114 NNIVKCQKLTDDHVQFLIYQILRGLKYIH-SAD--IIHRDLKPSNLAVNEDCELKILDFG 170
Query: 220 LSNQAPDMAARLHSTRVLGTFGYHAPE 246
L+ D T + T Y APE
Sbjct: 171 LARHTDD-----EMTGYVATRWYRAPE 192
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 92/207 (44%), Gaps = 31/207 (14%)
Query: 53 EVPAISVDELK----EITENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQP-- 105
E P EL E+ E + + +G G+YG V K+G A+KKL Q
Sbjct: 4 ERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII 63
Query: 106 -DEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQP 164
+ ++ ++ +KHEN + LL V +R L EF ++ + H + GA
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLD--VFTPARSLE-EF---NDVYLVTH----LMGADL 113
Query: 165 GPVLSWQQRVK-----IAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFD 219
++ Q+ + +GL+Y+H AD IIHRD+K SN+ + +D KI DF
Sbjct: 114 NNIVKCQKLTDDHVQFLIYQILRGLKYIH-SAD--IIHRDLKPSNLAVNEDCELKILDFG 170
Query: 220 LSNQAPDMAARLHSTRVLGTFGYHAPE 246
L+ D T + T Y APE
Sbjct: 171 LARHTDD-----EMTGYVATRWYRAPE 192
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 92/207 (44%), Gaps = 31/207 (14%)
Query: 53 EVPAISVDELK----EITENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQP-- 105
E P EL E+ E + + +G G+YG V K+G A+KKL Q
Sbjct: 9 ERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII 68
Query: 106 -DEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQP 164
+ ++ ++ +KHEN + LL V +R L EF ++ + H + GA
Sbjct: 69 HAKRTYRELRLLKHMKHENVIGLLD--VFTPARSLE-EF---NDVYLVTH----LMGADL 118
Query: 165 GPVLSWQQRVK-----IAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFD 219
++ Q+ + +GL+Y+H AD IIHRD+K SN+ + +D KI DF
Sbjct: 119 NNIVKCQKLTDDHVQFLIYQILRGLKYIH-SAD--IIHRDLKPSNLAVNEDCELKILDFG 175
Query: 220 LSNQAPDMAARLHSTRVLGTFGYHAPE 246
L+ D T + T Y APE
Sbjct: 176 LARHTDD-----EMTGYVATRWYRAPE 197
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 92/207 (44%), Gaps = 31/207 (14%)
Query: 53 EVPAISVDELK----EITENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQP-- 105
E P EL E+ E + + +G G+YG V K+G A+KKL Q
Sbjct: 1 ERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII 60
Query: 106 -DEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQP 164
+ ++ ++ +KHEN + LL V +R L EF ++ + H + GA
Sbjct: 61 HAKRTYRELRLLKHMKHENVIGLLD--VFTPARSLE-EF---NDVYLVTH----LMGADL 110
Query: 165 GPVLSWQQRVK-----IAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFD 219
++ Q+ + +GL+Y+H AD IIHRD+K SN+ + +D KI DF
Sbjct: 111 NNIVKCQKLTDDHVQFLIYQILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFG 167
Query: 220 LSNQAPDMAARLHSTRVLGTFGYHAPE 246
L+ D T + T Y APE
Sbjct: 168 LARHTDD-----EMTGYVATRWYRAPE 189
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 81/187 (43%), Gaps = 21/187 (11%)
Query: 67 ENFGTNALIGEGSYGR-VYYGILKSGHAAAIKKLDASKQPDEEFLAQVS----MVSRLKH 121
E+F ++GEGS+ V L + AIK L+ E + V+ ++SRL H
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGA- 180
FV+L D +A NG L + + RK + S+ + A
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRK---------IGSFDETCTRFYTAE 138
Query: 181 -AKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGT 239
LEYLH K IIHRD+K N+L+ +D +I DF + + + + +GT
Sbjct: 139 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 240 FGYHAPE 246
Y +PE
Sbjct: 196 AQYVSPE 202
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 77/178 (43%), Gaps = 17/178 (9%)
Query: 75 IGEGSYGRVYYGILKS-GHAAAIKKL--DASKQPDEEFLAQVSMVSRLKHENFVQLLGYC 131
+G G++G V+ +S G IK + D S+ P E+ A++ ++ L H N +++
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVF 89
Query: 132 VDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKA 191
D + + E G L + + V G LS ++ L Y H +
Sbjct: 90 EDYHNMYIVMETCEGGELLE-----RIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ- 143
Query: 192 DPHIIHRDIKSSNVLIFDD---DVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
H++H+D+K N+L D KI DF L A + HST GT Y APE
Sbjct: 144 --HVVHKDLKPENILFQDTSPHSPIKIIDFGL---AELFKSDEHSTNAAGTALYMAPE 196
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 79/163 (48%), Gaps = 18/163 (11%)
Query: 75 IGEGSYGRVY----YGILKSG--HAAAIKKLD--ASKQPDEEFLAQVSMVSRLKHE-NFV 125
+G G++G+V +GI K+ A+K L A+ ++++ ++ + H N V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 126 QLLGYCVD-GTSRVLAYEFASNGSLHDILHGRKG-VKGAQPGPV----LSWQQRVKIAVG 179
LLG C G ++ EF G+L L ++ +P + L+ + + +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ 156
Query: 180 AAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSN 222
AKG+E+L A IHRD+ + N+L+ + +V KI DF L+
Sbjct: 157 VAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLAR 196
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 78/185 (42%), Gaps = 26/185 (14%)
Query: 75 IGEGSYGRVYYGILK-SGHAAAIKKLDASKQPD--EEFLAQVSMVSRLKHENFVQLLGYC 131
+G G +G V I + +G AIK+ P E + ++ ++ +L H N V
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSA-REV 80
Query: 132 VDGTSRV-------LAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGL 184
DG ++ LA E+ G L L+ + G + GP+ + + + L
Sbjct: 81 PDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRT------LLSDISSAL 134
Query: 185 EYLHEKADPHIIHRDIKSSNVLIFDDD---VAKIADFDLSNQAPDMAARLHSTRVLGTFG 241
YLHE IIHRD+K N+++ + KI D A ++ T +GT
Sbjct: 135 RYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDL---GYAKELDQGELCTEFVGTLQ 188
Query: 242 YHAPE 246
Y APE
Sbjct: 189 YLAPE 193
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 78/185 (42%), Gaps = 26/185 (14%)
Query: 75 IGEGSYGRVYYGILK-SGHAAAIKKLDASKQPD--EEFLAQVSMVSRLKHENFVQLLGYC 131
+G G +G V I + +G AIK+ P E + ++ ++ +L H N V
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSA-REV 81
Query: 132 VDGTSRV-------LAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGL 184
DG ++ LA E+ G L L+ + G + GP+ + + + L
Sbjct: 82 PDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRT------LLSDISSAL 135
Query: 185 EYLHEKADPHIIHRDIKSSNVLIFDDD---VAKIADFDLSNQAPDMAARLHSTRVLGTFG 241
YLHE IIHRD+K N+++ + KI D A ++ T +GT
Sbjct: 136 RYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDL---GYAKELDQGELCTEFVGTLQ 189
Query: 242 YHAPE 246
Y APE
Sbjct: 190 YLAPE 194
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 88/192 (45%), Gaps = 27/192 (14%)
Query: 64 EITENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQP---DEEFLAQVSMVSRL 119
E+ E + + +G G+YG V K+G A+KKL Q + ++ ++ +
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 120 KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVK---- 175
KHEN + LL V +R L EF ++ + H + GA ++ Q+
Sbjct: 79 KHENVIGLLD--VFTPARSLE-EF---NDVYLVTH----LMGADLNNIVKCQKLTDDHVQ 128
Query: 176 -IAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 234
+ +GL+Y+H AD IIHRD+K SN+ + +D KI DF L+ D T
Sbjct: 129 FLIYQILRGLKYIH-SAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMT 180
Query: 235 RVLGTFGYHAPE 246
+ T Y APE
Sbjct: 181 GYVATRWYRAPE 192
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 88/192 (45%), Gaps = 27/192 (14%)
Query: 64 EITENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQP---DEEFLAQVSMVSRL 119
E+ E + + +G G+YG V K+G A+KKL Q + ++ ++ +
Sbjct: 15 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 74
Query: 120 KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVK---- 175
KHEN + LL V +R L EF ++ + H + GA ++ Q+
Sbjct: 75 KHENVIGLLD--VFTPARSLE-EF---NDVYLVTH----LMGADLNNIVKCQKLTDDHVQ 124
Query: 176 -IAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 234
+ +GL+Y+H AD IIHRD+K SN+ + +D KI DF L+ D T
Sbjct: 125 FLIYQILRGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMT 176
Query: 235 RVLGTFGYHAPE 246
+ T Y APE
Sbjct: 177 GYVATRWYRAPE 188
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 83/187 (44%), Gaps = 30/187 (16%)
Query: 75 IGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCV-D 133
+G+G YG V+ G + G A+K + + ++ L+HEN +LG+ D
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFRETELYNTVMLRHEN---ILGFIASD 71
Query: 134 GTSR------VLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYL 187
TSR L + GSL+D L L ++I + A GL +L
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYLQL----------TTLDTVSCLRIVLSIASGLAHL 121
Query: 188 H-----EKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS---NQAPDMAARLHSTRVLGT 239
H + P I HRD+KS N+L+ + IAD L+ +Q+ + ++ RV GT
Sbjct: 122 HIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-GT 180
Query: 240 FGYHAPE 246
Y APE
Sbjct: 181 KRYMAPE 187
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 75/167 (44%), Gaps = 20/167 (11%)
Query: 67 ENFGTNALIGEGSYGRVYYGIL------KSGHAAAIKKLDASKQPDEEFLAQVSMVSRLK 120
E+ N ++GEG +G VY G+ K A K D + E+F+++ ++ L
Sbjct: 24 EDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLD 83
Query: 121 HENFVQLLGYCVDGTSRVLAYEFASNGSL-HDILHGRKGVKGAQPGPVLSWQQRVKIAVG 179
H + V+L+G + + ++ E G L H + + +K VL+ V ++
Sbjct: 84 HPHIVKLIGIIEEEPTWIIM-ELYPYGELGHYLERNKNSLK------VLT---LVLYSLQ 133
Query: 180 AAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
K + YL + +HRDI N+L+ + K+ DF LS D
Sbjct: 134 ICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGLSRYIED 177
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 75/167 (44%), Gaps = 20/167 (11%)
Query: 67 ENFGTNALIGEGSYGRVYYGIL------KSGHAAAIKKLDASKQPDEEFLAQVSMVSRLK 120
E+ N ++GEG +G VY G+ K A K D + E+F+++ ++ L
Sbjct: 8 EDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLD 67
Query: 121 HENFVQLLGYCVDGTSRVLAYEFASNGSL-HDILHGRKGVKGAQPGPVLSWQQRVKIAVG 179
H + V+L+G + + ++ E G L H + + +K VL+ V ++
Sbjct: 68 HPHIVKLIGIIEEEPTWIIM-ELYPYGELGHYLERNKNSLK------VLT---LVLYSLQ 117
Query: 180 AAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
K + YL + +HRDI N+L+ + K+ DF LS D
Sbjct: 118 ICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGLSRYIED 161
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 83/187 (44%), Gaps = 30/187 (16%)
Query: 75 IGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCV-D 133
+G+G YG V+ G + G A+K + + ++ L+HEN +LG+ D
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFRETELYNTVMLRHEN---ILGFIASD 71
Query: 134 GTSR------VLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYL 187
TSR L + GSL+D L L ++I + A GL +L
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYLQL----------TTLDTVSCLRIVLSIASGLAHL 121
Query: 188 H-----EKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS---NQAPDMAARLHSTRVLGT 239
H + P I HRD+KS N+L+ + IAD L+ +Q+ + ++ RV GT
Sbjct: 122 HIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-GT 180
Query: 240 FGYHAPE 246
Y APE
Sbjct: 181 KRYMAPE 187
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 75/167 (44%), Gaps = 20/167 (11%)
Query: 67 ENFGTNALIGEGSYGRVYYGIL------KSGHAAAIKKLDASKQPDEEFLAQVSMVSRLK 120
E+ N ++GEG +G VY G+ K A K D + E+F+++ ++ L
Sbjct: 12 EDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLD 71
Query: 121 HENFVQLLGYCVDGTSRVLAYEFASNGSL-HDILHGRKGVKGAQPGPVLSWQQRVKIAVG 179
H + V+L+G + + ++ E G L H + + +K VL+ V ++
Sbjct: 72 HPHIVKLIGIIEEEPTWIIM-ELYPYGELGHYLERNKNSLK------VLT---LVLYSLQ 121
Query: 180 AAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
K + YL + +HRDI N+L+ + K+ DF LS D
Sbjct: 122 ICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGLSRYIED 165
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 92/207 (44%), Gaps = 31/207 (14%)
Query: 53 EVPAISVDELK----EITENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQP-- 105
E P EL E+ E + + +G G+YG V K+G A+KKL Q
Sbjct: 4 ERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII 63
Query: 106 -DEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQP 164
+ ++ ++ +KHEN + LL V +R L EF ++ + H + GA
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLD--VFTPARSLE-EF---NDVYLVTH----LMGADL 113
Query: 165 GPVLSWQQRVK-----IAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFD 219
++ Q+ + +GL+Y+H AD IIHRD+K SN+ + +D KI DF
Sbjct: 114 NNIVKXQKLTDDHVQFLIYQILRGLKYIH-SAD--IIHRDLKPSNLAVNEDCELKILDFG 170
Query: 220 LSNQAPDMAARLHSTRVLGTFGYHAPE 246
L+ D T + T Y APE
Sbjct: 171 LARHTDD-----EMTGYVATRWYRAPE 192
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 76/178 (42%), Gaps = 21/178 (11%)
Query: 75 IGEGSYGRV---YYGILKSGHAAAIKKLDASKQP---DEEFLAQVSMVSRLKHENFVQLL 128
+G G+YG V Y L+ A+KKL Q ++ ++ LKHEN + LL
Sbjct: 36 VGSGAYGSVCSAYDARLR--QKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 129 GYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLH 188
TS E S L L G + LS + + +GL+Y+H
Sbjct: 94 DVFTPATS----IEDFSEVYLVTTLMG-ADLNNIVKSQALSDEHVQFLVYQLLRGLKYIH 148
Query: 189 EKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
IIHRD+K SNV + +D +I DF L+ QA + T + T Y APE
Sbjct: 149 SAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADE-----EMTGYVATRWYRAPE 198
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 82/177 (46%), Gaps = 20/177 (11%)
Query: 75 IGEGSYGRVYYGILKSGH-AAAIKKL---DASKQPDEEFLAQVSMVSRLKHENFVQLLGY 130
IGEG+YG V+ + H A+K++ D + L ++ ++ LKH+N V+L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 131 CVDGTSRVLAYEFASNGSLHDILHGRKGVKG-AQPGPVLSWQQRVKIAVGAAKGLEYLHE 189
L +EF D+ G P V S+ ++ KGL + H
Sbjct: 70 LHSDKKLTLVFEFCD----QDLKKYFDSCNGDLDPEIVKSFLFQL------LKGLGFCHS 119
Query: 190 KADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
+ +++HRD+K N+LI + K+ADF L+ +A + R +S V+ T Y P+
Sbjct: 120 R---NVLHRDLKPQNLLINRNGELKLADFGLA-RAFGIPVRCYSAEVV-TLWYRPPD 171
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 78/165 (47%), Gaps = 20/165 (12%)
Query: 75 IGEGSYGRVY----YGILKSG--HAAAIKKLD--ASKQPDEEFLAQVSMVSRLKHE-NFV 125
+G G++G+V +GI K+ A+K L A+ ++++ ++ + H N V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 126 QLLGYCVD-GTSRVLAYEFASNGSLHDILHGRKG-VKGAQPGP------VLSWQQRVKIA 177
LLG C G ++ EF G+L L ++ + P L+ + + +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYS 156
Query: 178 VGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSN 222
AKG+E+L A IHRD+ + N+L+ + +V KI DF L+
Sbjct: 157 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 198
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 22/198 (11%)
Query: 55 PAISVDELKEITENFGTNALIGEGSYGRVYYGILKSG---HAAAIKKLDASKQPD--EEF 109
P+ ++D +K NF ++G+GS+G+V K +A I K D Q D E
Sbjct: 9 PSNNLDRVKLTDFNFLM--VLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECT 66
Query: 110 LAQVSMVSRLKHENFVQLLGYCVDGTSRV-LAYEFASNGSLHDILHGRKGVKGAQPGPVL 168
+ + +++ L F+ L C R+ E+ + G L + H ++ K +P
Sbjct: 67 MVEKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDL--MYHIQQVGKFKEP---- 120
Query: 169 SWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMA 228
Q V A + GL +LH++ II+RD+K NV++ + KIADF + + M
Sbjct: 121 ---QAVFYAAEISIGLFFLHKRG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEH--MM 172
Query: 229 ARLHSTRVLGTFGYHAPE 246
+ + GT Y APE
Sbjct: 173 DGVTTREFCGTPDYIAPE 190
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 86/189 (45%), Gaps = 22/189 (11%)
Query: 64 EITENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQPD---EEFLAQVSMVSRL 119
E+ + + + +G G+YG V I K SG AIKKL Q + + ++ ++ +
Sbjct: 21 ELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHM 80
Query: 120 KHENFVQLLGYCVDGTSRVLAYEF-ASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAV 178
+HEN + LL +S Y+F + L G+K ++ ++++ V
Sbjct: 81 QHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSE--------EKIQYLV 132
Query: 179 -GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVL 237
KGL+Y+H ++HRD+K N+ + +D KI DF L+ A T +
Sbjct: 133 YQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARH-----ADAEMTGYV 184
Query: 238 GTFGYHAPE 246
T Y APE
Sbjct: 185 VTRWYRAPE 193
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 78/165 (47%), Gaps = 20/165 (12%)
Query: 75 IGEGSYGRVY----YGILKSG--HAAAIKKLD--ASKQPDEEFLAQVSMVSRLKHE-NFV 125
+G G++G+V +GI K+ A+K L A+ ++++ ++ + H N V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 126 QLLGYCVD-GTSRVLAYEFASNGSLHDILHGRKG-VKGAQPGP------VLSWQQRVKIA 177
LLG C G ++ EF G+L L ++ + P L+ + + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 178 VGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSN 222
AKG+E+L A IHRD+ + N+L+ + +V KI DF L+
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 187
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 78/165 (47%), Gaps = 20/165 (12%)
Query: 75 IGEGSYGRVY----YGILKSG--HAAAIKKLD--ASKQPDEEFLAQVSMVSRLKHE-NFV 125
+G G++G+V +GI K+ A+K L A+ ++++ ++ + H N V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 126 QLLGYCVD-GTSRVLAYEFASNGSLHDILHGRKG-VKGAQPGP------VLSWQQRVKIA 177
LLG C G ++ EF G+L L ++ + P L+ + + +
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 178 VGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSN 222
AKG+E+L A IHRD+ + N+L+ + +V KI DF L+
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 187
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 78/165 (47%), Gaps = 20/165 (12%)
Query: 75 IGEGSYGRVY----YGILKSG--HAAAIKKLD--ASKQPDEEFLAQVSMVSRLKHE-NFV 125
+G G++G+V +GI K+ A+K L A+ ++++ ++ + H N V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 126 QLLGYCVD-GTSRVLAYEFASNGSLHDILHGRKG-VKGAQPGP------VLSWQQRVKIA 177
LLG C G ++ EF G+L L ++ + P L+ + + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 178 VGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSN 222
AKG+E+L A IHRD+ + N+L+ + +V KI DF L+
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 187
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 78/165 (47%), Gaps = 20/165 (12%)
Query: 75 IGEGSYGRVY----YGILKSG--HAAAIKKLD--ASKQPDEEFLAQVSMVSRLKHE-NFV 125
+G G++G+V +GI K+ A+K L A+ ++++ ++ + H N V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 126 QLLGYCVD-GTSRVLAYEFASNGSLHDILHGRKG-VKGAQPGP------VLSWQQRVKIA 177
LLG C G ++ EF G+L L ++ + P L+ + + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 178 VGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSN 222
AKG+E+L A IHRD+ + N+L+ + +V KI DF L+
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 196
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 78/165 (47%), Gaps = 20/165 (12%)
Query: 75 IGEGSYGRVY----YGILKSG--HAAAIKKLD--ASKQPDEEFLAQVSMVSRLKHE-NFV 125
+G G++G+V +GI K+ A+K L A+ ++++ ++ + H N V
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 126 QLLGYCVD-GTSRVLAYEFASNGSLHDILHGRKG-VKGAQPGP------VLSWQQRVKIA 177
LLG C G ++ EF G+L L ++ + P L+ + + +
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 191
Query: 178 VGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSN 222
AKG+E+L A IHRD+ + N+L+ + +V KI DF L+
Sbjct: 192 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 233
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 78/165 (47%), Gaps = 20/165 (12%)
Query: 75 IGEGSYGRVY----YGILKSG--HAAAIKKLD--ASKQPDEEFLAQVSMVSRLKHE-NFV 125
+G G++G+V +GI K+ A+K L A+ ++++ ++ + H N V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 126 QLLGYCVD-GTSRVLAYEFASNGSLHDILHGRKG-VKGAQPGP------VLSWQQRVKIA 177
LLG C G ++ EF G+L L ++ + P L+ + + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 178 VGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSN 222
AKG+E+L A IHRD+ + N+L+ + +V KI DF L+
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 187
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 78/165 (47%), Gaps = 20/165 (12%)
Query: 75 IGEGSYGRVY----YGILKSG--HAAAIKKLD--ASKQPDEEFLAQVSMVSRLKHE-NFV 125
+G G++G+V +GI K+ A+K L A+ ++++ ++ + H N V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 126 QLLGYCVD-GTSRVLAYEFASNGSLHDILHGRKG-VKGAQPGP------VLSWQQRVKIA 177
LLG C G ++ EF G+L L ++ + P L+ + + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 178 VGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSN 222
AKG+E+L A IHRD+ + N+L+ + +V KI DF L+
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 196
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 71/161 (44%), Gaps = 20/161 (12%)
Query: 66 TENFGTNALIGEGSYGRVYYGILKS--------GHAAAIKKLD-ASKQPDEEFLAQVSMV 116
E+ N +G+G++ +++ G+ + +K LD A + E F SM+
Sbjct: 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMM 66
Query: 117 SRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKI 176
S+L H++ V G C G +L EF GSL L K + W ++++
Sbjct: 67 SKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCIN------ILW--KLEV 118
Query: 177 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIAD 217
A A + +L E +IH ++ + N+L+ ++ K +
Sbjct: 119 AKQLAWAMHFLEENT---LIHGNVCAKNILLIREEDRKTGN 156
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 84/183 (45%), Gaps = 27/183 (14%)
Query: 74 LIGEGSYGRVYYGILK-SGHAAAIKKL------DASKQPDEEFLAQVSMVSRLKHENFVQ 126
+GEG + VY K + AIKK+ +A + L ++ ++ L H N +
Sbjct: 17 FLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIG 76
Query: 127 LLGYCVDGTSRVLAYEFASNGSL-HDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLE 185
LL A+ SN SL D + V VL+ + +GLE
Sbjct: 77 LLD----------AFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLE 126
Query: 186 YLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQ--APDMAARLHSTRVLGTFGYH 243
YLH+ I+HRD+K +N+L+ ++ V K+ADF L+ +P+ R + +V+ T Y
Sbjct: 127 YLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPN---RAYXHQVV-TRWYR 179
Query: 244 APE 246
APE
Sbjct: 180 APE 182
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 78/165 (47%), Gaps = 20/165 (12%)
Query: 75 IGEGSYGRVY----YGILKSG--HAAAIKKLD--ASKQPDEEFLAQVSMVSRLKHE-NFV 125
+G G++G+V +GI K+ A+K L A+ ++++ ++ + H N V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 126 QLLGYCVD-GTSRVLAYEFASNGSLHDILHGRKG-VKGAQPGP------VLSWQQRVKIA 177
LLG C G ++ EF G+L L ++ + P L+ + + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 178 VGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSN 222
AKG+E+L A IHRD+ + N+L+ + +V KI DF L+
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 196
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 80/179 (44%), Gaps = 24/179 (13%)
Query: 75 IGEGSYGRVYYGILK-SGHAAAIKKLDASKQPDEEFLAQVSM----VSRLKHENFVQLLG 129
+G G++G+V G + +GH A+K L+ K + + ++ + +H + ++L
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 130 YCVDGTSRVLAYEFASNGSLHDIL--HGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYL 187
T + E+ S G L D + HGR A+ ++ ++Y
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEAR-----------RLFQQILSAVDYC 127
Query: 188 HEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
H ++HRD+K NVL+ AKIADF LSN D L ++ G+ Y APE
Sbjct: 128 HRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSD-GEFLRTS--CGSPNYAAPE 180
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 88/187 (47%), Gaps = 23/187 (12%)
Query: 68 NFGTNALIGEGSYGRVYYGILK-----SGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHE 122
+F ++G+GS+G+V+ + K SGH A+K L A + + R++ +
Sbjct: 29 HFELLKVLGQGSFGKVFL-VRKVTRPDSGHLYAMKVLKK---------ATLKVRDRVRTK 78
Query: 123 NFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKG--VKGAQPGPVLSWQQRVKIAVGA 180
+L L Y F + G L+ IL +G + V+ ++ VK +
Sbjct: 79 MERDILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAE 138
Query: 181 -AKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGT 239
A GL++LH II+RD+K N+L+ ++ K+ DF LS +A D + +S GT
Sbjct: 139 LALGLDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYS--FCGT 193
Query: 240 FGYHAPE 246
Y APE
Sbjct: 194 VEYMAPE 200
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 80/179 (44%), Gaps = 24/179 (13%)
Query: 75 IGEGSYGRVYYGILK-SGHAAAIKKLDASKQPDEEFLAQVSM----VSRLKHENFVQLLG 129
+G G++G+V G + +GH A+K L+ K + + ++ + +H + ++L
Sbjct: 24 LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQ 83
Query: 130 YCVDGTSRVLAYEFASNGSLHDIL--HGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYL 187
+ + E+ S G L D + +GR L ++ ++ G++Y
Sbjct: 84 VISTPSDIFMVMEYVSGGELFDYICKNGR-----------LDEKESRRLFQQILSGVDYC 132
Query: 188 HEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
H ++HRD+K NVL+ AKIADF LSN D S G+ Y APE
Sbjct: 133 HRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSC---GSPNYAAPE 185
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 78/179 (43%), Gaps = 24/179 (13%)
Query: 75 IGEGSYGRVYYGILK-SGHAAAIKKLDASKQPDEEFLAQVSM----VSRLKHENFVQLLG 129
+G G++G+V G + +GH A+K L+ K + + ++ + +H + ++L
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 130 YCVDGTSRVLAYEFASNGSLHDIL--HGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYL 187
T + E+ S G L D + HGR A+ ++ ++Y
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEAR-----------RLFQQILSAVDYC 127
Query: 188 HEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
H ++HRD+K NVL+ AKIADF LSN D S G+ Y APE
Sbjct: 128 HRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSC---GSPNYAAPE 180
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 76/178 (42%), Gaps = 21/178 (11%)
Query: 75 IGEGSYGRV---YYGILKSGHAAAIKKLDASKQP---DEEFLAQVSMVSRLKHENFVQLL 128
+G G+YG V Y L+ A+KKL Q ++ ++ LKHEN + LL
Sbjct: 36 VGSGAYGSVCSAYDARLR--QKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 129 GYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLH 188
TS E S L L G + LS + + +GL+Y+H
Sbjct: 94 DVFTPATS----IEDFSEVYLVTTLMG-ADLNNIVKCQALSDEHVQFLVYQLLRGLKYIH 148
Query: 189 EKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
IIHRD+K SNV + +D +I DF L+ QA + T + T Y APE
Sbjct: 149 SAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADE-----EMTGYVATRWYRAPE 198
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 92/207 (44%), Gaps = 31/207 (14%)
Query: 53 EVPAISVDELK----EITENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQP-- 105
E P EL E+ E + + +G G+YG V K+G A+KKL Q
Sbjct: 4 ERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII 63
Query: 106 -DEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQP 164
+ ++ ++ +KHEN + LL V +R L EF ++ + H + GA
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLD--VFTPARSLE-EF---NDVYLVTH----LMGADL 113
Query: 165 GPVLSWQQRVK-----IAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFD 219
++ Q+ + +GL+Y+H AD IIHRD+K SN+ + +D KI D+
Sbjct: 114 NNIVKCQKLTDDHVQFLIYQILRGLKYIH-SAD--IIHRDLKPSNLAVNEDCELKILDYG 170
Query: 220 LSNQAPDMAARLHSTRVLGTFGYHAPE 246
L+ D T + T Y APE
Sbjct: 171 LARHTDD-----EMTGYVATRWYRAPE 192
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 82/175 (46%), Gaps = 39/175 (22%)
Query: 68 NFGTNALIGEGSYGRVYYGILKSGHAA-----AIKKLDASKQPDEEFLAQVSMVSRLKHE 122
+F A++G+G++G+V +K+ +A AIKK+ +++ L++V +++ L H+
Sbjct: 7 DFEEIAVLGQGAFGQV----VKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQ 62
Query: 123 -------------NFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLS 169
NFV+ + ++ + E+ N +L+D++H
Sbjct: 63 YVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLN---------- 112
Query: 170 WQQR---VKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 221
QQR ++ + L Y+H + IIHRD+K N+ I + KI DF L+
Sbjct: 113 -QQRDEYWRLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLA 163
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 76/161 (47%), Gaps = 16/161 (9%)
Query: 75 IGEGSYGRVY----YGILKSG--HAAAIKKLD--ASKQPDEEFLAQVSMVSRLKHE-NFV 125
+G G++G+V +GI K+ A+K L A+ ++++ ++ + H N V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 126 QLLGYCVD-GTSRVLAYEFASNGSLHDILHGRKGVKGAQPG---PVLSWQQRVKIAVGAA 181
LLG C G ++ EF G+L L ++ L+ + + + A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVA 154
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSN 222
KG+E+L A IHRD+ + N+L+ + +V KI DF L+
Sbjct: 155 KGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLAR 192
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 76/161 (47%), Gaps = 16/161 (9%)
Query: 75 IGEGSYGRVY----YGILKSG--HAAAIKKLD--ASKQPDEEFLAQVSMVSRLKHE-NFV 125
+G G++G+V +GI K+ A+K L A+ ++++ ++ + H N V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 126 QLLGYCVD-GTSRVLAYEFASNGSLHDILHGRKGVKGAQPG---PVLSWQQRVKIAVGAA 181
LLG C G ++ EF G+L L ++ L+ + + + A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVA 154
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSN 222
KG+E+L A IHRD+ + N+L+ + +V KI DF L+
Sbjct: 155 KGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLAR 192
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 84/197 (42%), Gaps = 28/197 (14%)
Query: 65 ITENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQPDEEF--LAQVSMVSRLKH 121
I+ +F +L+GEG+YG V K +G AIKK++ +P L ++ ++ KH
Sbjct: 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKH 68
Query: 122 ENFVQLLGY----CVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIA 177
EN + + + + V + LH ++ + +LS
Sbjct: 69 ENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQ----------MLSDDHIQYFI 118
Query: 178 VGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAA-------- 229
+ ++ LH ++IHRD+K SN+LI + K+ DF L+ + AA
Sbjct: 119 YQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQ 175
Query: 230 RLHSTRVLGTFGYHAPE 246
+ T + T Y APE
Sbjct: 176 QSGMTEXVATRWYRAPE 192
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 78/164 (47%), Gaps = 20/164 (12%)
Query: 71 TNALIGEGSYGRVYYGIL----KSGHAAAIKKLD--ASKQPDEEFLAQVSMVSRLKHENF 124
++ +IG+G +G VY+G ++ AIK L Q E FL + ++ L H N
Sbjct: 25 SDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNV 84
Query: 125 VQLLGYCV--DGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAK 182
+ L+G + +G VL + +G L + ++ Q P + + + + A+
Sbjct: 85 LALIGIMLPPEGLPHVLL-PYMCHGDL------LQFIRSPQRNPTV--KDLISFGLQVAR 135
Query: 183 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
G+EYL E+ +HRD+ + N ++ + K+ADF L+ D
Sbjct: 136 GMEYLAEQK---FVHRDLAARNCMLDESFTVKVADFGLARDILD 176
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 51/108 (47%), Gaps = 15/108 (13%)
Query: 139 LAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHR 198
+ E GSL +L K + P +L K+++ +GL YL EK I+HR
Sbjct: 91 ICMEHMDGGSLDQVLKEAKRI----PEEILG-----KVSIAVLRGLAYLREKH--QIMHR 139
Query: 199 DIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
D+K SN+L+ K+ DF +S Q D A +GT Y APE
Sbjct: 140 DVKPSNILVNSRGEIKLCDFGVSGQLIDSMA----NSFVGTRSYMAPE 183
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 83/192 (43%), Gaps = 27/192 (14%)
Query: 67 ENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDAS----------KQPDEEFLAQVSM 115
EN+ ++G G V I K + A+K +D + ++ E L +V +
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 116 VSRLK-HENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 174
+ ++ H N +QL T L ++ G L D L + LS ++
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKV---------TLSEKETR 127
Query: 175 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 234
KI + + LH+ +I+HRD+K N+L+ DD K+ DF S Q D +L S
Sbjct: 128 KIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFSCQL-DPGEKLRS- 182
Query: 235 RVLGTFGYHAPE 246
V GT Y APE
Sbjct: 183 -VCGTPSYLAPE 193
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 84/197 (42%), Gaps = 28/197 (14%)
Query: 65 ITENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQPDEEF--LAQVSMVSRLKH 121
I+ +F +L+GEG+YG V K +G AIKK++ +P L ++ ++ KH
Sbjct: 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKH 68
Query: 122 ENFVQLLGY----CVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIA 177
EN + + + + V + LH ++ + +LS
Sbjct: 69 ENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQ----------MLSDDHIQYFI 118
Query: 178 VGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAA-------- 229
+ ++ LH ++IHRD+K SN+LI + K+ DF L+ + AA
Sbjct: 119 YQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQ 175
Query: 230 RLHSTRVLGTFGYHAPE 246
+ T + T Y APE
Sbjct: 176 QSGMTEYVATRWYRAPE 192
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 81/190 (42%), Gaps = 23/190 (12%)
Query: 65 ITENFGTNALIGEGSYGRVYYGILK-SGHAAAIK---KLDASKQPDEE-FLAQVSMVSRL 119
++ + ++G+GS+G V K +G A+K K ++ D+E L +V ++ +L
Sbjct: 24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 83
Query: 120 KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVG 179
H N ++L + D L E + G L D + RK +I
Sbjct: 84 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA---------RIIRQ 134
Query: 180 AAKGLEYLHEKADPHIIHRDIKSSNVLI---FDDDVAKIADFDLSNQAPDMAARLHSTRV 236
G+ Y+H+ I+HRD+K N+L+ D +I DF LS A
Sbjct: 135 VLSGITYMHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLSTH---FEASKKMKDK 188
Query: 237 LGTFGYHAPE 246
+GT Y APE
Sbjct: 189 IGTAYYIAPE 198
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 82/190 (43%), Gaps = 23/190 (12%)
Query: 65 ITENFGTNALIGEGSYGRVYYGILK-SGHAAAIK---KLDASKQPDEE-FLAQVSMVSRL 119
++ + ++G+GS+G V K +G A+K K ++ D+E L +V ++ +L
Sbjct: 47 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 106
Query: 120 KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVG 179
H N ++L + D L E + G L D + RK S +I
Sbjct: 107 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR---------FSEVDAARIIRQ 157
Query: 180 AAKGLEYLHEKADPHIIHRDIKSSNVLI---FDDDVAKIADFDLSNQAPDMAARLHSTRV 236
G+ Y+H+ I+HRD+K N+L+ D +I DF LS A
Sbjct: 158 VLSGITYMHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLSTH---FEASKKMKDK 211
Query: 237 LGTFGYHAPE 246
+GT Y APE
Sbjct: 212 IGTAYYIAPE 221
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 82/190 (43%), Gaps = 23/190 (12%)
Query: 65 ITENFGTNALIGEGSYGRVYYGILK-SGHAAAIK---KLDASKQPDEE-FLAQVSMVSRL 119
++ + ++G+GS+G V K +G A+K K ++ D+E L +V ++ +L
Sbjct: 48 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 107
Query: 120 KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVG 179
H N ++L + D L E + G L D + RK S +I
Sbjct: 108 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR---------FSEVDAARIIRQ 158
Query: 180 AAKGLEYLHEKADPHIIHRDIKSSNVLI---FDDDVAKIADFDLSNQAPDMAARLHSTRV 236
G+ Y+H+ I+HRD+K N+L+ D +I DF LS A
Sbjct: 159 VLSGITYMHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLSTH---FEASKKMKDK 212
Query: 237 LGTFGYHAPE 246
+GT Y APE
Sbjct: 213 IGTAYYIAPE 222
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 81/190 (42%), Gaps = 23/190 (12%)
Query: 65 ITENFGTNALIGEGSYGRVYYGILK-SGHAAAIK---KLDASKQPDEE-FLAQVSMVSRL 119
++ + ++G+GS+G V K +G A+K K ++ D+E L +V ++ +L
Sbjct: 30 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 89
Query: 120 KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVG 179
H N ++L + D L E + G L D + RK +I
Sbjct: 90 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA---------RIIRQ 140
Query: 180 AAKGLEYLHEKADPHIIHRDIKSSNVLI---FDDDVAKIADFDLSNQAPDMAARLHSTRV 236
G+ Y+H+ I+HRD+K N+L+ D +I DF LS A
Sbjct: 141 VLSGITYMHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLSTH---FEASKKMKDK 194
Query: 237 LGTFGYHAPE 246
+GT Y APE
Sbjct: 195 IGTAYYIAPE 204
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 76/178 (42%), Gaps = 21/178 (11%)
Query: 75 IGEGSYGRV---YYGILKSGHAAAIKKLDASKQP---DEEFLAQVSMVSRLKHENFVQLL 128
+G G+YG V Y L+ A+KKL Q ++ ++ LKHEN + LL
Sbjct: 28 VGSGAYGSVCSAYDARLR--QKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 85
Query: 129 GYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLH 188
TS E S L L G + LS + + +GL+Y+H
Sbjct: 86 DVFTPATS----IEDFSEVYLVTTLMG-ADLNNIVKCQALSDEHVQFLVYQLLRGLKYIH 140
Query: 189 EKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
IIHRD+K SNV + +D +I DF L+ QA + T + T Y APE
Sbjct: 141 SAG---IIHRDLKPSNVAVNEDCELRILDFGLARQADE-----EMTGYVATRWYRAPE 190
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 94/224 (41%), Gaps = 35/224 (15%)
Query: 32 GAYHASEAAPKGAQAVKVQPIEVPAISVDELKEITENFGTNALIGEGSYGRVYYGI-LKS 90
G A P G+ +V P A S+D + IT+ +GEG+YG VY I +
Sbjct: 10 GTLEAQTQGP-GSMSVSAAP---SATSIDRYRRITK-------LGEGTYGEVYKAIDTVT 58
Query: 91 GHAAAIKKLDASKQPD---EEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNG 147
AIK++ + + + +VS++ L+H N ++L L +E+A N
Sbjct: 59 NETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAEN- 117
Query: 148 SLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLI 207
D+ K P +S + G+ + H + +HRD+K N+L+
Sbjct: 118 ---DL------KKYMDKNPDVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLL 165
Query: 208 FDDD-----VAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
D V KI DF L+ +A + R + ++ T Y PE
Sbjct: 166 SVSDASETPVLKIGDFGLA-RAFGIPIRQFTHEII-TLWYRPPE 207
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 82/177 (46%), Gaps = 20/177 (11%)
Query: 75 IGEGSYGRVYYGILKSGH-AAAIKKL---DASKQPDEEFLAQVSMVSRLKHENFVQLLGY 130
IGEG+YG V+ + H A+K++ D + L ++ ++ LKH+N V+L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 131 CVDGTSRVLAYEFASNGSLHDILHGRKGVKG-AQPGPVLSWQQRVKIAVGAAKGLEYLHE 189
L +EF D+ G P V S+ ++ KGL + H
Sbjct: 70 LHSDKKLTLVFEFCD----QDLKKYFDSCNGDLDPEIVKSFLFQL------LKGLGFCHS 119
Query: 190 KADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
+ +++HRD+K N+LI + K+A+F L+ +A + R +S V+ T Y P+
Sbjct: 120 R---NVLHRDLKPQNLLINRNGELKLANFGLA-RAFGIPVRCYSAEVV-TLWYRPPD 171
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 82/192 (42%), Gaps = 28/192 (14%)
Query: 64 EITENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQPD---EEFLAQVSMVSRL 119
E+ + + + +G G+YG V I K SG AIKKL Q + + ++ ++ +
Sbjct: 39 ELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHM 98
Query: 120 KHENFVQLLGYCVDGTSRVLAYEFA-----SNGSLHDILHGRKGVKGAQPGPVLSWQQRV 174
+HEN + LL +S Y+F L I+ G S ++
Sbjct: 99 QHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIM-----------GMEFSEEKIQ 147
Query: 175 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 234
+ KGL+Y+H ++HRD+K N+ + +D KI DF L+ A T
Sbjct: 148 YLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARH-----ADAEMT 199
Query: 235 RVLGTFGYHAPE 246
+ T Y APE
Sbjct: 200 GYVVTRWYRAPE 211
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 79/191 (41%), Gaps = 22/191 (11%)
Query: 63 KEITENFGTNALIGEGSYGRVYYG---ILKSGHAAAIKKLDASKQPDEE----FLAQVSM 115
K I E + +G G VY IL AIK + + EE F +V
Sbjct: 7 KIINERYKIVDKLGGGGMSTVYLAEDTILNI--KVAIKAIFIPPREKEETLKRFEREVHN 64
Query: 116 VSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVK 175
S+L H+N V ++ + L E+ +L + + GP LS +
Sbjct: 65 SSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESH--------GP-LSVDTAIN 115
Query: 176 IAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTR 235
G+++ H D I+HRDIK N+LI + KI DF ++ +A + +
Sbjct: 116 FTNQILDGIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIA-KALSETSLTQTNH 171
Query: 236 VLGTFGYHAPE 246
VLGT Y +PE
Sbjct: 172 VLGTVQYFSPE 182
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 82/181 (45%), Gaps = 29/181 (16%)
Query: 75 IGEGSYGRVYYGI---------LKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFV 125
+GEGS+G+V LK +KK D + + E +S + L+H + +
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVERE----ISYLKLLRHPHII 72
Query: 126 QLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLE 185
+L T V+ E+A G L D + +K + + + Q++ A+ E
Sbjct: 73 KLYDVITTPTDIVMVIEYAG-GELFDYIVEKKRMTEDEGR---RFFQQIICAI------E 122
Query: 186 YLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAP 245
Y H I+HRD+K N+L+ D+ KIADF LSN D L ++ G+ Y AP
Sbjct: 123 YCHRHK---IVHRDLKPENLLLDDNLNVKIADFGLSNIMTD-GNFLKTS--CGSPNYAAP 176
Query: 246 E 246
E
Sbjct: 177 E 177
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 78/163 (47%), Gaps = 16/163 (9%)
Query: 65 ITENFGTNALIGEGSYGRVYYGILKSGHA-AAIKKLDASKQPD---EEFLAQVSMVSRLK 120
+ +N+ LIG GSYG VY K+ AIKK++ + + L ++++++RLK
Sbjct: 24 VPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLK 83
Query: 121 HENFVQLLGYCVDGTSRVLAYEFASNGSLHDILH-GRKGVKGAQPGPVLSWQQRVK-IAV 178
+ ++L + +L ++ L+ +L +K P+ ++ +K I
Sbjct: 84 SDYIIRLYDLII--PDDLLKFD-----ELYIVLEIADSDLKKLFKTPIFLTEEHIKTILY 136
Query: 179 GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 221
G ++HE IIHRD+K +N L+ D K+ DF L+
Sbjct: 137 NLLLGENFIHESG---IIHRDLKPANCLLNQDCSVKVCDFGLA 176
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
Query: 175 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 234
K+++ KGL YL EK I+HRD+K SN+L+ K+ DF +S Q D A
Sbjct: 127 KVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA----N 180
Query: 235 RVLGTFGYHAPE 246
+GT Y +PE
Sbjct: 181 SFVGTRSYMSPE 192
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
Query: 175 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 234
K+++ KGL YL EK I+HRD+K SN+L+ K+ DF +S Q D A
Sbjct: 170 KVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA----N 223
Query: 235 RVLGTFGYHAPE 246
+GT Y +PE
Sbjct: 224 SFVGTRSYMSPE 235
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
Query: 175 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 234
K+++ KGL YL EK I+HRD+K SN+L+ K+ DF +S Q D A
Sbjct: 135 KVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA----N 188
Query: 235 RVLGTFGYHAPE 246
+GT Y +PE
Sbjct: 189 SFVGTRSYMSPE 200
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
Query: 175 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 234
K+++ KGL YL EK I+HRD+K SN+L+ K+ DF +S Q D A
Sbjct: 111 KVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMA----N 164
Query: 235 RVLGTFGYHAPE 246
+GT Y +PE
Sbjct: 165 EFVGTRSYMSPE 176
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
Query: 175 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 234
K+++ KGL YL EK I+HRD+K SN+L+ K+ DF +S Q D A
Sbjct: 108 KVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA----N 161
Query: 235 RVLGTFGYHAPE 246
+GT Y +PE
Sbjct: 162 SFVGTRSYMSPE 173
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
Query: 175 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 234
K+++ KGL YL EK I+HRD+K SN+L+ K+ DF +S Q D A
Sbjct: 108 KVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA----N 161
Query: 235 RVLGTFGYHAPE 246
+GT Y +PE
Sbjct: 162 SFVGTRSYMSPE 173
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
Query: 175 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 234
K+++ KGL YL EK I+HRD+K SN+L+ K+ DF +S Q D A
Sbjct: 108 KVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA----N 161
Query: 235 RVLGTFGYHAPE 246
+GT Y +PE
Sbjct: 162 SFVGTRSYMSPE 173
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 77/181 (42%), Gaps = 23/181 (12%)
Query: 75 IGEGSYGRVYYGILKSGHA----AAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQL--- 127
IG GS+ VY G+ ++ +K + F + + L+H N V+
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYDS 93
Query: 128 LGYCVDGTS-RVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEY 186
V G VL E ++G+L L K K + + SW +++ KGL++
Sbjct: 94 WESTVKGKKCIVLVTELXTSGTLKTYL---KRFKVXKIKVLRSWCRQI------LKGLQF 144
Query: 187 LHEKADPHIIHRDIKSSNVLIF-DDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAP 245
LH + P IIHRD+K N+ I KI D L+ A+ V+GT + AP
Sbjct: 145 LHTRTPP-IIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKA----VIGTPEFXAP 199
Query: 246 E 246
E
Sbjct: 200 E 200
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
Query: 175 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 234
K+++ KGL YL EK I+HRD+K SN+L+ K+ DF +S Q D A
Sbjct: 108 KVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA----N 161
Query: 235 RVLGTFGYHAPE 246
+GT Y +PE
Sbjct: 162 SFVGTRSYMSPE 173
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
Query: 175 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 234
K+++ KGL YL EK I+HRD+K SN+L+ K+ DF +S Q D A
Sbjct: 108 KVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA----N 161
Query: 235 RVLGTFGYHAPE 246
+GT Y +PE
Sbjct: 162 SFVGTRSYMSPE 173
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 83/187 (44%), Gaps = 21/187 (11%)
Query: 65 ITENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQ-PDEEFLAQVSMVSRLKHE 122
I + F ++G G++ V+ + +G A+K + S D +++++ ++KHE
Sbjct: 7 IRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHE 66
Query: 123 NFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAK 182
N V L T L + S G L D + R GV + ++ Q+V AV
Sbjct: 67 NIVTLEDIYESTTHYYLVMQLVSGGELFDRILER-GVYTEKDASLVI--QQVLSAV---- 119
Query: 183 GLEYLHEKADPHIIHRDIKSSNVLIF---DDDVAKIADFDLSNQAPDMAARLHSTRVLGT 239
+YLHE I+HRD+K N+L ++ I DF LS M + GT
Sbjct: 120 --KYLHENG---IVHRDLKPENLLYLTPEENSKIMITDFGLSK----MEQNGIMSTACGT 170
Query: 240 FGYHAPE 246
GY APE
Sbjct: 171 PGYVAPE 177
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 91/207 (43%), Gaps = 31/207 (14%)
Query: 53 EVPAISVDELK----EITENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQP-- 105
E P EL E+ E + + +G G+YG V K+G A+KKL Q
Sbjct: 4 ERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII 63
Query: 106 -DEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQP 164
+ ++ ++ +KHEN + LL V +R L EF ++ + H + GA
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLD--VFTPARSLE-EF---NDVYLVTH----LMGADL 113
Query: 165 GPVLSWQQRVK-----IAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFD 219
++ Q+ + +GL+Y+H AD IIHRD+K SN+ + +D KI F
Sbjct: 114 NNIVKCQKLTDDHVQFLIYQILRGLKYIH-SAD--IIHRDLKPSNLAVNEDCELKILGFG 170
Query: 220 LSNQAPDMAARLHSTRVLGTFGYHAPE 246
L+ D T + T Y APE
Sbjct: 171 LARHTDD-----EMTGYVATRWYRAPE 192
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 82/192 (42%), Gaps = 27/192 (14%)
Query: 67 ENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDAS----------KQPDEEFLAQVSM 115
EN+ ++G G V I K + A+K +D + ++ E L +V +
Sbjct: 4 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 63
Query: 116 VSRLK-HENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 174
+ ++ H N +QL T L ++ G L D L + LS ++
Sbjct: 64 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKV---------TLSEKETR 114
Query: 175 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 234
KI + + LH+ +I+HRD+K N+L+ DD K+ DF S Q D +L
Sbjct: 115 KIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFSCQL-DPGEKLRE- 169
Query: 235 RVLGTFGYHAPE 246
V GT Y APE
Sbjct: 170 -VCGTPSYLAPE 180
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 22/187 (11%)
Query: 67 ENFGTNALIGEGSYGRVYYGILKSG---HAAAIKKLDASKQPD--EEFLAQVSMVSRLKH 121
+NF ++G+GS+G+V +K +A + K D Q D E + + ++S ++
Sbjct: 23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARN 82
Query: 122 ENFVQLLGYCVDGTSRVL-AYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKI-AVG 179
F+ L C R+ EF + G L + H +K + + R + A
Sbjct: 83 HPFLTQLFCCFQTPDRLFFVMEFVNGGDL--MFHIQKSRRFDE--------ARARFYAAE 132
Query: 180 AAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGT 239
L +LH+K II+RD+K NVL+ + K+ADF + + + + + GT
Sbjct: 133 IISALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEG--ICNGVTTATFCGT 187
Query: 240 FGYHAPE 246
Y APE
Sbjct: 188 PDYIAPE 194
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 76/172 (44%), Gaps = 20/172 (11%)
Query: 65 ITENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQPDEEF--LAQVSMVSRLKH 121
I+ +F +L+GEG+YG V K +G AIKK++ +P L ++ ++ KH
Sbjct: 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKH 68
Query: 122 ENFVQLLGY----CVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIA 177
EN + + + + V + LH ++ + +LS
Sbjct: 69 ENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQ----------MLSDDHIQYFI 118
Query: 178 VGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAA 229
+ ++ LH ++IHRD+K SN+LI + K+ DF L+ + AA
Sbjct: 119 YQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAA 167
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 82/192 (42%), Gaps = 27/192 (14%)
Query: 67 ENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDAS----------KQPDEEFLAQVSM 115
EN+ ++G G V I K + A+K +D + ++ E L +V +
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 116 VSRLK-HENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRV 174
+ ++ H N +QL T L ++ G L D L + LS ++
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKV---------TLSEKETR 127
Query: 175 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 234
KI + + LH+ +I+HRD+K N+L+ DD K+ DF S Q D +L
Sbjct: 128 KIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFSCQL-DPGEKLRE- 182
Query: 235 RVLGTFGYHAPE 246
V GT Y APE
Sbjct: 183 -VCGTPSYLAPE 193
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 85/192 (44%), Gaps = 27/192 (14%)
Query: 67 ENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFV- 125
ENF ++G G+YG+V+ SGH D K + L + ++V + K
Sbjct: 54 ENFELLKVLGTGAYGKVFLVRKISGH-------DTGKLYAMKVLKKATIVQKAKTTEHTR 106
Query: 126 ---QLLGYCVDGTSRV-LAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQR-----VKI 176
Q+L + V L Y F + LH IL + G + LS ++R V+I
Sbjct: 107 TERQVLEHIRQSPFLVTLHYAFQTETKLHLIL---DYINGGELFTHLSQRERFTEHEVQI 163
Query: 177 AVGA-AKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQ-APDMAARLHST 234
VG LE+LH+ II+RDIK N+L+ + + DF LS + D R +
Sbjct: 164 YVGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYD- 219
Query: 235 RVLGTFGYHAPE 246
GT Y AP+
Sbjct: 220 -FCGTIEYMAPD 230
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 91/207 (43%), Gaps = 31/207 (14%)
Query: 53 EVPAISVDELK----EITENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQP-- 105
E P EL E+ E + + +G G+YG V K+G A+KKL Q
Sbjct: 4 ERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII 63
Query: 106 -DEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQP 164
+ ++ ++ +KHEN + LL V +R L EF ++ + H + GA
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLD--VFTPARSLE-EF---NDVYLVTH----LMGADL 113
Query: 165 GPVLSWQQRVK-----IAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFD 219
++ Q+ + +GL+Y+H AD IIHRD+K SN+ + +D KI D
Sbjct: 114 NNIVKCQKLTDDHVQFLIYQILRGLKYIH-SAD--IIHRDLKPSNLAVNEDCELKILDRG 170
Query: 220 LSNQAPDMAARLHSTRVLGTFGYHAPE 246
L+ D T + T Y APE
Sbjct: 171 LARHTDD-----EMTGYVATRWYRAPE 192
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 76/184 (41%), Gaps = 21/184 (11%)
Query: 68 NFGTNALIGEGSYGRVYYGI-LKSGHAAAIK----KLDASKQPDEEFLAQVSMVSRLKHE 122
N+ +GEGS+G+V +G A+K K+ A ++S + L+H
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 68
Query: 123 NFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAK 182
+ ++L ++ E+A N I+ K +S Q+ +
Sbjct: 69 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDK----------MSEQEARRFFQQIIS 118
Query: 183 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 242
+EY H I+HRD+K N+L+ + KIADF LSN D S G+ Y
Sbjct: 119 AVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNY 172
Query: 243 HAPE 246
APE
Sbjct: 173 AAPE 176
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 76/184 (41%), Gaps = 21/184 (11%)
Query: 68 NFGTNALIGEGSYGRVYYGI-LKSGHAAAIK----KLDASKQPDEEFLAQVSMVSRLKHE 122
N+ +GEGS+G+V +G A+K K+ A ++S + L+H
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 74
Query: 123 NFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAK 182
+ ++L ++ E+A N I+ K +S Q+ +
Sbjct: 75 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDK----------MSEQEARRFFQQIIS 124
Query: 183 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 242
+EY H I+HRD+K N+L+ + KIADF LSN D S G+ Y
Sbjct: 125 AVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNY 178
Query: 243 HAPE 246
APE
Sbjct: 179 AAPE 182
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 76/184 (41%), Gaps = 21/184 (11%)
Query: 68 NFGTNALIGEGSYGRVYYGI-LKSGHAAAIK----KLDASKQPDEEFLAQVSMVSRLKHE 122
N+ +GEGS+G+V +G A+K K+ A ++S + L+H
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 64
Query: 123 NFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAK 182
+ ++L ++ E+A N I+ K +S Q+ +
Sbjct: 65 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDK----------MSEQEARRFFQQIIS 114
Query: 183 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 242
+EY H I+HRD+K N+L+ + KIADF LSN D S G+ Y
Sbjct: 115 AVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNY 168
Query: 243 HAPE 246
APE
Sbjct: 169 AAPE 172
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 76/184 (41%), Gaps = 21/184 (11%)
Query: 68 NFGTNALIGEGSYGRVYYGI-LKSGHAAAIK----KLDASKQPDEEFLAQVSMVSRLKHE 122
N+ +GEGS+G+V +G A+K K+ A ++S + L+H
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 73
Query: 123 NFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAK 182
+ ++L ++ E+A N I+ K +S Q+ +
Sbjct: 74 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDK----------MSEQEARRFFQQIIS 123
Query: 183 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 242
+EY H I+HRD+K N+L+ + KIADF LSN D S G+ Y
Sbjct: 124 AVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNY 177
Query: 243 HAPE 246
APE
Sbjct: 178 AAPE 181
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 84/204 (41%), Gaps = 34/204 (16%)
Query: 68 NFGTNALIGEGSYGRVYYGILK---SGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENF 124
+F +G G +G V+ K +A +L + E+ + +V +++L+H
Sbjct: 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGI 65
Query: 125 VQLLGYCVDGTS---------RVLAY---EFASNGSLHDILHGRKGVKGAQPGPVLSWQQ 172
V+ ++ + +V Y + +L D ++GR ++ + L
Sbjct: 66 VRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLH--- 122
Query: 173 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDL----------SN 222
I + A+ +E+LH K ++HRD+K SN+ DDV K+ DF L
Sbjct: 123 ---IFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQT 176
Query: 223 QAPDMAARLHSTRVLGTFGYHAPE 246
M A T +GT Y +PE
Sbjct: 177 VLTPMPAYARHTGQVGTKLYMSPE 200
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 87/192 (45%), Gaps = 27/192 (14%)
Query: 64 EITENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQP---DEEFLAQVSMVSRL 119
E+ E + + +G G+YG V K+G A+KKL Q + ++ ++ +
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 120 KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVK---- 175
KHEN + LL V +R L EF ++ + H + GA ++ Q+
Sbjct: 79 KHENVIGLLD--VFTPARSLE-EF---NDVYLVTH----LMGADLNNIVKCQKLTDDHVQ 128
Query: 176 -IAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 234
+ +GL+Y+H AD IIHRD+K SN+ + +D KI D L+ D T
Sbjct: 129 FLIYQILRGLKYIH-SAD--IIHRDLKPSNLAVNEDCELKILDAGLARHTDD-----EMT 180
Query: 235 RVLGTFGYHAPE 246
+ T Y APE
Sbjct: 181 GYVATRWYRAPE 192
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 74/165 (44%), Gaps = 18/165 (10%)
Query: 68 NFGTNALIGEGSYGRVYYGILKSGHAAAIKKL---DASKQPDEEFLAQVSMVSRLKHENF 124
NF T + E G ++ G + G+ +K L D S + +F + + H N
Sbjct: 13 NFLTK--LNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNV 69
Query: 125 VQLLGYCVDGTSR--VLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAK 182
+ +LG C + L + GSL+++LH V+ Q VK A+ A+
Sbjct: 70 LPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNF-------VVDQSQAVKFALDMAR 122
Query: 183 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKI--ADFDLSNQAP 225
G+ +LH +P I + S +V+I +D A+I AD S Q+P
Sbjct: 123 GMAFLH-TLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSP 166
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 88/206 (42%), Gaps = 31/206 (15%)
Query: 56 AISVDELKEITENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDAS---KQPDEEFLA 111
A S D ++ + + IG G+YG V + +G AIKK+ + + L
Sbjct: 44 ARSFDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLR 103
Query: 112 QVSMVSRLKHENFVQLLGYCVDGTSRVLAY-EFAS--------NGSLHDILHGRKGVKGA 162
++ ++ KH+N + + D + Y EF S LH I+H +
Sbjct: 104 ELKILKHFKHDNIIAI----KDILRPTVPYGEFKSVYVVLDLMESDLHQIIHS------S 153
Query: 163 QPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSN 222
QP L+ + +GL+Y+H +IHRD+K SN+L+ ++ KI DF ++
Sbjct: 154 QP---LTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMAR 207
Query: 223 QAPDMAA--RLHSTRVLGTFGYHAPE 246
A + T + T Y APE
Sbjct: 208 GLCTSPAEHQYFMTEYVATRWYRAPE 233
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 64/144 (44%), Gaps = 19/144 (13%)
Query: 107 EEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGP 166
EE +VS++ ++ H N + L + T VL E S G L D L ++
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES-------- 111
Query: 167 VLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDV----AKIADFDLSN 222
LS ++ G+ YLH K I H D+K N+++ D ++ K+ DF L++
Sbjct: 112 -LSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH 167
Query: 223 QAPDMAARLHSTRVLGTFGYHAPE 246
+ D + + GT + APE
Sbjct: 168 EIED---GVEFKNIFGTPEFVAPE 188
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 99/230 (43%), Gaps = 34/230 (14%)
Query: 33 AYHASEAAPKGAQAVKVQPI----EVPAISVDELKEITENFGTNALIGEGSYGRVYYGIL 88
A ++A PKG + + Q + E+P + KE + + +IG G V +
Sbjct: 58 AKKLNDAQPKGTENLYFQSMGPEDELPDWAA--AKEFYQKYDPKDVIGRGVSSVVRRCVH 115
Query: 89 K-SGHAAAIKKLDAS-KQPDEEFLAQVSMVSRLK---------HENFVQLLGYCVDGTSR 137
+ +GH A+K ++ + ++ E L +V +R + H + + L+ +
Sbjct: 116 RATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFM 175
Query: 138 VLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIH 197
L ++ G L D L + LS ++ I + + +LH +I+H
Sbjct: 176 FLVFDLMRKGELFDYLTEKVA---------LSEKETRSIMRSLLEAVSFLHAN---NIVH 223
Query: 198 RDIKSSNVLIFDDDVAKIADFDLS-NQAPDMAARLHSTRVLGTFGYHAPE 246
RD+K N+L+ D+ +++DF S + P R + GT GY APE
Sbjct: 224 RDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLR----ELCGTPGYLAPE 269
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 79/190 (41%), Gaps = 23/190 (12%)
Query: 65 ITENFGTNALIGEGSYGRVYYGILK-SGHAAAIK---KLDASKQPDEE-FLAQVSMVSRL 119
++ + ++G+GS+G V K +G A+K K ++ D+E L +V ++ +L
Sbjct: 24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 83
Query: 120 KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVG 179
H N +L + D L E + G L D + RK +I
Sbjct: 84 DHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA---------RIIRQ 134
Query: 180 AAKGLEYLHEKADPHIIHRDIKSSNVLI---FDDDVAKIADFDLSNQAPDMAARLHSTRV 236
G+ Y H+ I+HRD+K N+L+ D +I DF LS A
Sbjct: 135 VLSGITYXHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLSTH---FEASKKXKDK 188
Query: 237 LGTFGYHAPE 246
+GT Y APE
Sbjct: 189 IGTAYYIAPE 198
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 79/178 (44%), Gaps = 17/178 (9%)
Query: 75 IGEGSYGRV---YYGILKSGHAAAIKKLDASKQPD--EEFLAQVSMVSRLKHENFVQLLG 129
IGEG+YG V Y + K+ AIKK+ + + L ++ ++ R +HEN + +
Sbjct: 51 IGEGAYGMVSSAYDHVRKT--RVAIKKISPFEHQTYCQRTLREIQILLRFRHENVIGIRD 108
Query: 130 YCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHE 189
T + + + L+ K +K Q LS +GL+Y+H
Sbjct: 109 ILRASTLEAMRDVYIVQDLMETDLY--KLLKSQQ----LSNDHICYFLYQILRGLKYIHS 162
Query: 190 KADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQA-PDMAARLHSTRVLGTFGYHAPE 246
+++HRD+K SN+LI KI DF L+ A P+ T + T Y APE
Sbjct: 163 A---NVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPE 217
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 91/207 (43%), Gaps = 31/207 (14%)
Query: 53 EVPAISVDELK----EITENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQP-- 105
E P EL E+ E + + +G G+YG V K+G A+KKL Q
Sbjct: 4 ERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII 63
Query: 106 -DEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQP 164
+ ++ ++ +KHEN + LL V +R L EF ++ + H + GA
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLD--VFTPARSLE-EF---NDVYLVTH----LMGADL 113
Query: 165 GPVLSWQQRVK-----IAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFD 219
++ Q+ + +GL+Y+H AD IIHRD+K SN+ + +D KI D
Sbjct: 114 NNIVKCQKLTDDHVQFLIYQILRGLKYIH-SAD--IIHRDLKPSNLAVNEDCELKILDGG 170
Query: 220 LSNQAPDMAARLHSTRVLGTFGYHAPE 246
L+ D T + T Y APE
Sbjct: 171 LARHTDD-----EMTGYVATRWYRAPE 192
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 98/231 (42%), Gaps = 38/231 (16%)
Query: 31 DGAYHASEAAPKGAQAVKVQPIEVPAISVDELKEITENFGTNALIGEGSYGRVYYGILK- 89
+ A+ A+ A K +K + +V V + EI E IG G+YG V +
Sbjct: 25 EPAHTAASVAAKNLALLKARSFDV-TFDVGDEYEIIET------IGNGAYGVVSSARRRL 77
Query: 90 SGHAAAIKKLDAS---KQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAY-EFAS 145
+G AIKK+ + + L ++ ++ KH+N + + D + Y EF S
Sbjct: 78 TGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAI----KDILRPTVPYGEFKS 133
Query: 146 --------NGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIH 197
LH I+H +QP L+ + +GL+Y+H +IH
Sbjct: 134 VYVVLDLMESDLHQIIHS------SQP---LTLEHVRYFLYQLLRGLKYMHSA---QVIH 181
Query: 198 RDIKSSNVLIFDDDVAKIADFDLSNQAPDMAA--RLHSTRVLGTFGYHAPE 246
RD+K SN+L+ ++ KI DF ++ A + T + T Y APE
Sbjct: 182 RDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPE 232
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 76/185 (41%), Gaps = 35/185 (18%)
Query: 75 IGEGSYGRVYYGIL-KSGHAAAIKKLDASKQPDEEFLA-----QVSMVSRLKHENFVQLL 128
+G G+YG V + ++G AIKKL Q E A ++ ++ ++HEN + LL
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQ--SELFAKRAYRELRLLKHMRHENVIGLL 90
Query: 129 GYCV------DGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAV-GAA 181
D T L F + H + G + R++ V
Sbjct: 91 DVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLG------------EDRIQFLVYQML 138
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 241
KGL Y+H IIHRD+K N+ + +D KI DF L+ QA TR
Sbjct: 139 KGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVVTR-----W 190
Query: 242 YHAPE 246
Y APE
Sbjct: 191 YRAPE 195
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 54/109 (49%), Gaps = 13/109 (11%)
Query: 139 LAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHR 198
+ E+ +L DI+H GP ++ ++ +++ A + L + H+ IIHR
Sbjct: 93 IVMEYVDGVTLRDIVHTE--------GP-MTPKRAIEVIADACQALNFSHQNG---IIHR 140
Query: 199 DIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST-RVLGTFGYHAPE 246
D+K +N+LI + K+ DF ++ D + T V+GT Y +PE
Sbjct: 141 DVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPE 189
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 64/144 (44%), Gaps = 19/144 (13%)
Query: 107 EEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGP 166
EE +VS++ ++ H N + L + T VL E S G L D L ++
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES-------- 111
Query: 167 VLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDV----AKIADFDLSN 222
LS ++ G+ YLH K I H D+K N+++ D ++ K+ DF L++
Sbjct: 112 -LSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH 167
Query: 223 QAPDMAARLHSTRVLGTFGYHAPE 246
+ D + + GT + APE
Sbjct: 168 EIED---GVEFKNIFGTPEFVAPE 188
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 64/144 (44%), Gaps = 19/144 (13%)
Query: 107 EEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGP 166
EE +VS++ ++ H N + L + T VL E S G L D L ++
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES-------- 111
Query: 167 VLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDV----AKIADFDLSN 222
LS ++ G+ YLH K I H D+K N+++ D ++ K+ DF L++
Sbjct: 112 -LSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH 167
Query: 223 QAPDMAARLHSTRVLGTFGYHAPE 246
+ D + + GT + APE
Sbjct: 168 EIED---GVEFKNIFGTPEFVAPE 188
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 64/144 (44%), Gaps = 19/144 (13%)
Query: 107 EEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGP 166
EE +VS++ ++ H N + L + T VL E S G L D L ++
Sbjct: 60 EEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKES-------- 111
Query: 167 VLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDV----AKIADFDLSN 222
LS ++ G+ YLH K I H D+K N+++ D ++ K+ DF L++
Sbjct: 112 -LSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH 167
Query: 223 QAPDMAARLHSTRVLGTFGYHAPE 246
+ D + + GT + APE
Sbjct: 168 EIEDG---VEFKNIFGTPEFVAPE 188
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 81/197 (41%), Gaps = 32/197 (16%)
Query: 64 EITENFGTNALIGEGSYGRVYYGILKSGHAA-AIKKLDASKQ-PDEEFLAQVSMVSRL-K 120
+ T+ + IG GSY I K+ + A+K +D SK+ P EE + ++ R +
Sbjct: 19 QFTDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPTEE----IEILLRYGQ 74
Query: 121 HENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGA 180
H N + L DG + E G L D + +K + VL
Sbjct: 75 HPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVL---------FTI 125
Query: 181 AKGLEYLHEKADPHIIHRDIKSSNVLIFDD----DVAKIADFDLSNQ---------APDM 227
K +EYLH + ++HRD+K SN+L D+ + +I DF + Q P
Sbjct: 126 TKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCY 182
Query: 228 AARLHSTRVLGTFGYHA 244
A + VL GY A
Sbjct: 183 TANFVAPEVLERQGYDA 199
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 81/175 (46%), Gaps = 39/175 (22%)
Query: 68 NFGTNALIGEGSYGRVYYGILKSGHAA-----AIKKLDASKQPDEEFLAQVSMVSRLKHE 122
+F A++G+G++G+V +K+ +A AIKK+ +++ L++V +++ L H+
Sbjct: 7 DFEEIAVLGQGAFGQV----VKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLNHQ 62
Query: 123 -------------NFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLS 169
NFV+ ++ + E+ N +L+D++H
Sbjct: 63 YVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLN---------- 112
Query: 170 WQQR---VKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 221
QQR ++ + L Y+H + IIHR++K N+ I + KI DF L+
Sbjct: 113 -QQRDEYWRLFRQILEALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLA 163
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 64/144 (44%), Gaps = 19/144 (13%)
Query: 107 EEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGP 166
EE +VS++ ++ H N + L + T VL E S G L D L ++
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES-------- 111
Query: 167 VLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDV----AKIADFDLSN 222
LS ++ G+ YLH K I H D+K N+++ D ++ K+ DF L++
Sbjct: 112 -LSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH 167
Query: 223 QAPDMAARLHSTRVLGTFGYHAPE 246
+ D + + GT + APE
Sbjct: 168 EIED---GVEFKNIFGTPEFVAPE 188
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 81/197 (41%), Gaps = 32/197 (16%)
Query: 64 EITENFGTNALIGEGSYGRVYYGILKSGHAA-AIKKLDASKQ-PDEEFLAQVSMVSRL-K 120
+ T+ + IG GSY I K+ + A+K +D SK+ P EE + ++ R +
Sbjct: 19 QFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEE----IEILLRYGQ 74
Query: 121 HENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGA 180
H N + L DG + E G L D + +K + VL
Sbjct: 75 HPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVL---------FTI 125
Query: 181 AKGLEYLHEKADPHIIHRDIKSSNVLIFDD----DVAKIADFDLSNQ---------APDM 227
K +EYLH + ++HRD+K SN+L D+ + +I DF + Q P
Sbjct: 126 TKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCY 182
Query: 228 AARLHSTRVLGTFGYHA 244
A + VL GY A
Sbjct: 183 TANFVAPEVLERQGYDA 199
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 64/144 (44%), Gaps = 19/144 (13%)
Query: 107 EEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGP 166
EE +VS++ ++ H N + L + T VL E S G L D L ++
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES-------- 111
Query: 167 VLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDV----AKIADFDLSN 222
LS ++ G+ YLH K I H D+K N+++ D ++ K+ DF L++
Sbjct: 112 -LSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH 167
Query: 223 QAPDMAARLHSTRVLGTFGYHAPE 246
+ D + + GT + APE
Sbjct: 168 EIED---GVEFKNIFGTPEFVAPE 188
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 92/228 (40%), Gaps = 26/228 (11%)
Query: 29 GTDGAYHASEAAPKGAQAVKVQPI-----EVPAISVDELKEITENFGTNALIGEGSYGRV 83
G G+ A+ A P + V P E+P + VD + + +G+G + +
Sbjct: 1 GPLGSMSAAIAKPSAKPSAHVDPKSAPLKEIPDVLVDP--RTMKRYMRGRFLGKGGFAKC 58
Query: 84 YYGI---LKSGHAAAI--KKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRV 138
Y K A + K + E+ ++++ L + + V G+ D
Sbjct: 59 YEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVY 118
Query: 139 LAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHR 198
+ E SL ++ RK V +P +Q ++ G++YLH +IHR
Sbjct: 119 VVLEICRRRSLLELHKRRKAV--TEPEARYFMRQTIQ-------GVQYLHNN---RVIHR 166
Query: 199 DIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
D+K N+ + DD KI DF L+ + R + + GT Y APE
Sbjct: 167 DLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT--LCGTPNYIAPE 212
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 78/184 (42%), Gaps = 32/184 (17%)
Query: 75 IGEGSYGRVYYGILKSGHAA-AIKKLDASKQ-PDEEFLAQVSMVSRL-KHENFVQLLGYC 131
IG GSY + K+ + A+K +D SK+ P EE + ++ R +H N + L
Sbjct: 35 IGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEE----IEILLRYGQHPNIITLKDVY 90
Query: 132 VDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKA 191
DG L E G L D + +K + VL +G K +EYLH +
Sbjct: 91 DDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLH-------TIG--KTVEYLHSQG 141
Query: 192 DPHIIHRDIKSSNVLIFDD----DVAKIADFDLSNQ---------APDMAARLHSTRVLG 238
++HRD+K SN+L D+ + +I DF + Q P A + VL
Sbjct: 142 ---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLK 198
Query: 239 TFGY 242
GY
Sbjct: 199 RQGY 202
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 91/228 (39%), Gaps = 26/228 (11%)
Query: 29 GTDGAYHASEAAPKGAQAVKVQPI-----EVPAISVDELKEITENFGTNALIGEGSYGRV 83
G G+ A+ A P + V P E+P + VD + + +G+G + +
Sbjct: 1 GPLGSMSAAIAKPSAKPSAHVDPKSAPLKEIPDVLVDP--RTMKRYMRGRFLGKGGFAKC 58
Query: 84 YYGI---LKSGHAAAI--KKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRV 138
Y K A + K + E+ ++++ L + + V G+ D
Sbjct: 59 YEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVY 118
Query: 139 LAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHR 198
+ E SL ++ RK V +P +Q ++ G++YLH +IHR
Sbjct: 119 VVLEICRRRSLLELHKRRKAV--TEPEARYFMRQTIQ-------GVQYLHNN---RVIHR 166
Query: 199 DIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
D+K N+ + DD KI DF L+ + R + GT Y APE
Sbjct: 167 DLKLGNLFLNDDMDVKIGDFGLATKIEFDGER--KKXLCGTPNYIAPE 212
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 71/156 (45%), Gaps = 23/156 (14%)
Query: 75 IGEGSYGRVYYGILKSGHAA-AIKKLDASKQ-PDEEFLAQVSMVSRL-KHENFVQLLGYC 131
IG GSY + K+ + A+K +D SK+ P EE + ++ R +H N + L
Sbjct: 35 IGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEE----IEILLRYGQHPNIITLKDVY 90
Query: 132 VDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKA 191
DG L E G L D + +K + VL +G K +EYLH +
Sbjct: 91 DDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLH-------TIG--KTVEYLHSQG 141
Query: 192 DPHIIHRDIKSSNVLIFDD----DVAKIADFDLSNQ 223
++HRD+K SN+L D+ + +I DF + Q
Sbjct: 142 ---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQ 174
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
Query: 175 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 234
KIAV K LE+LH K +IHRD+K SNVLI K+ DF +S D A+ T
Sbjct: 157 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAK---T 211
Query: 235 RVLGTFGYHAPE 246
G Y APE
Sbjct: 212 IDAGCKPYMAPE 223
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 79/175 (45%), Gaps = 17/175 (9%)
Query: 75 IGEGSYGRVYYGILK-SGHAAAIK--KLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYC 131
+GEG+Y VY G K + + A+K +L+ + + +VS++ LKH N V L
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDII 69
Query: 132 VDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKA 191
S L +E+ + L L G +++ +GL Y H +
Sbjct: 70 HTEKSLTLVFEYL-DKDLKQYLD--------DCGNIINMHNVKLFLFQLLRGLAYCHRQK 120
Query: 192 DPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
++HRD+K N+LI + K+ADF L+ +A + + + V+ T Y P+
Sbjct: 121 ---VLHRDLKPQNLLINERGELKLADFGLA-RAKSIPTKTYDNEVV-TLWYRPPD 170
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 87/201 (43%), Gaps = 25/201 (12%)
Query: 53 EVPAISVDELKEITENFGTNALIGEGSYGRVYYG-ILKSGHAAAIKKL--DASKQPDEEF 109
E P++ + K E+F + ++G+GS+G+V+ K+ AIK L D D+
Sbjct: 7 ERPSLQI---KLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDD-- 61
Query: 110 LAQVSMVSR----LKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPG 165
+ +MV + L E+ +C T L + + + L+G + Q
Sbjct: 62 -VECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFF-------VMEYLNGGDLMYHIQSC 113
Query: 166 PVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAP 225
+ A GL++LH K I++RD+K N+L+ D KIADF + +
Sbjct: 114 HKFDLSRATFYAAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKE-- 168
Query: 226 DMAARLHSTRVLGTFGYHAPE 246
+M + GT Y APE
Sbjct: 169 NMLGDAKTNEFCGTPDYIAPE 189
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 91/228 (39%), Gaps = 26/228 (11%)
Query: 29 GTDGAYHASEAAPKGAQAVKVQPI-----EVPAISVDELKEITENFGTNALIGEGSYGRV 83
G G+ A+ A P + V P E+P + VD + + +G+G + +
Sbjct: 1 GPLGSMSAAIAKPSAKPSAHVDPKSAPLKEIPDVLVDP--RTMKRYMRGRFLGKGGFAKC 58
Query: 84 YYGI---LKSGHAAAI--KKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRV 138
Y K A + K + E+ ++++ L + + V G+ D
Sbjct: 59 YEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVY 118
Query: 139 LAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHR 198
+ E SL ++ RK V +P +Q ++ G++YLH +IHR
Sbjct: 119 VVLEICRRRSLLELHKRRKAV--TEPEARYFMRQTIQ-------GVQYLHNN---RVIHR 166
Query: 199 DIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
D+K N+ + DD KI DF L+ + R + GT Y APE
Sbjct: 167 DLKLGNLFLNDDMDVKIGDFGLATKIEFDGER--KKDLCGTPNYIAPE 212
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 54/109 (49%), Gaps = 13/109 (11%)
Query: 139 LAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHR 198
+ E+ +L DI+H GP ++ ++ +++ A + L + H+ IIHR
Sbjct: 93 IVMEYVDGVTLRDIVHTE--------GP-MTPKRAIEVIADACQALNFSHQNG---IIHR 140
Query: 199 DIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST-RVLGTFGYHAPE 246
D+K +N++I + K+ DF ++ D + T V+GT Y +PE
Sbjct: 141 DVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 189
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 54/109 (49%), Gaps = 13/109 (11%)
Query: 139 LAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHR 198
+ E+ +L DI+H GP ++ ++ +++ A + L + H+ IIHR
Sbjct: 93 IVMEYVDGVTLRDIVHTE--------GP-MTPKRAIEVIADACQALNFSHQNG---IIHR 140
Query: 199 DIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST-RVLGTFGYHAPE 246
D+K +N++I + K+ DF ++ D + T V+GT Y +PE
Sbjct: 141 DVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 189
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 54/109 (49%), Gaps = 13/109 (11%)
Query: 139 LAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHR 198
+ E+ +L DI+H GP ++ ++ +++ A + L + H+ IIHR
Sbjct: 93 IVMEYVDGVTLRDIVHTE--------GP-MTPKRAIEVIADACQALNFSHQNG---IIHR 140
Query: 199 DIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST-RVLGTFGYHAPE 246
D+K +N++I + K+ DF ++ D + T V+GT Y +PE
Sbjct: 141 DVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 189
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 54/109 (49%), Gaps = 13/109 (11%)
Query: 139 LAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHR 198
+ E+ +L DI+H GP ++ ++ +++ A + L + H+ IIHR
Sbjct: 93 IVMEYVDGVTLRDIVHTE--------GP-MTPKRAIEVIADACQALNFSHQNG---IIHR 140
Query: 199 DIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST-RVLGTFGYHAPE 246
D+K +N++I + K+ DF ++ D + T V+GT Y +PE
Sbjct: 141 DVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 189
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 81/187 (43%), Gaps = 23/187 (12%)
Query: 71 TNALIGEGSYGRVYYGI-LKSGHAAAIKKLD--ASKQPDEEFLAQVSMVSRLKHENFVQL 127
T+ L+GEG+Y +V + L++G A+K ++ A F ++ ++N ++L
Sbjct: 17 TSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILEL 76
Query: 128 LGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYL 187
+ + D T L +E GS+ + +K + ++ ++ A L++L
Sbjct: 77 IEFFEDDTRFYLVFEKLQGGSILAHIQKQKH---------FNEREASRVVRDVAAALDFL 127
Query: 188 HEKADPHIIHRDIKSSNVLIFDDD---VAKIADFDLS-----NQAPDMAARLHSTRVLGT 239
H K I HRD+K N+L + KI DFDL N + T G+
Sbjct: 128 HTKG---IAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGS 184
Query: 240 FGYHAPE 246
Y APE
Sbjct: 185 AEYMAPE 191
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 71/156 (45%), Gaps = 21/156 (13%)
Query: 97 KKLDASKQ--PDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILH 154
++L +S++ EE +V+++ ++H N + L + T VL E S G L D L
Sbjct: 48 RRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLA 107
Query: 155 GRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVA- 213
++ L+ + + G+ YLH K I H D+K N+++ D +V
Sbjct: 108 EKES---------LTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPN 155
Query: 214 ---KIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
K+ DF ++++ + A + GT + APE
Sbjct: 156 PRIKLIDFGIAHK---IEAGNEFKNIFGTPEFVAPE 188
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 71/156 (45%), Gaps = 21/156 (13%)
Query: 97 KKLDASKQ--PDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILH 154
++L +S++ EE +V+++ ++H N + L + T VL E S G L D L
Sbjct: 41 RRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLA 100
Query: 155 GRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDV-- 212
++ L+ + + G+ YLH K I H D+K N+++ D +V
Sbjct: 101 EKES---------LTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPN 148
Query: 213 --AKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
K+ DF ++++ + A + GT + APE
Sbjct: 149 PRIKLIDFGIAHK---IEAGNEFKNIFGTPEFVAPE 181
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 77/180 (42%), Gaps = 23/180 (12%)
Query: 75 IGEGSYGRVYYGILK-SGHAAAIKKLDASKQPDEE----FLAQVSMVSRLKHENFVQLLG 129
+G G+YG V K +G AIK + S L +V+++ +L H N ++L
Sbjct: 29 LGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYE 88
Query: 130 YCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHE 189
+ D + L E G L D + R+ ++ G YLH+
Sbjct: 89 FFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMK---------QVLSGTTYLHK 139
Query: 190 KADPHIIHRDIKSSNVLIFD---DDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
+I+HRD+K N+L+ D + KI DF LS ++ ++ LGT Y APE
Sbjct: 140 H---NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHF-EVGGKMKER--LGTAYYIAPE 193
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 54/109 (49%), Gaps = 13/109 (11%)
Query: 139 LAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHR 198
+ E+ +L DI+H GP ++ ++ +++ A + L + H+ IIHR
Sbjct: 110 IVMEYVDGVTLRDIVHTE--------GP-MTPKRAIEVIADACQALNFSHQNG---IIHR 157
Query: 199 DIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST-RVLGTFGYHAPE 246
D+K +N++I + K+ DF ++ D + T V+GT Y +PE
Sbjct: 158 DVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 206
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 85/198 (42%), Gaps = 17/198 (8%)
Query: 55 PAISVDELKEITENFGTNALIGEGSYGRV---YYGILKSGHAAAIKKLDASKQPD--EEF 109
P + ++ ++ + + IGEG+YG V Y + K AIKK+ + +
Sbjct: 31 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKV--RVAIKKISPFEHQTYCQRT 88
Query: 110 LAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLS 169
L ++ ++ R +HEN + ++ R E + L L G K + LS
Sbjct: 89 LREIKILLRFRHENIIG-----INDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQH-LS 142
Query: 170 WQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQA-PDMA 228
+GL+Y+H +++HRD+K SN+L+ KI DF L+ A PD
Sbjct: 143 NDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHD 199
Query: 229 ARLHSTRVLGTFGYHAPE 246
T + T Y APE
Sbjct: 200 HTGFLTEYVATRWYRAPE 217
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 77/180 (42%), Gaps = 23/180 (12%)
Query: 75 IGEGSYGRVYYGILK-SGHAAAIKKLDASKQPDEE----FLAQVSMVSRLKHENFVQLLG 129
+G G+YG V K +G AIK + S L +V+++ +L H N ++L
Sbjct: 12 LGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYE 71
Query: 130 YCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHE 189
+ D + L E G L D + R+ ++ G YLH+
Sbjct: 72 FFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMK---------QVLSGTTYLHK 122
Query: 190 KADPHIIHRDIKSSNVLIFD---DDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
+I+HRD+K N+L+ D + KI DF LS ++ ++ LGT Y APE
Sbjct: 123 H---NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHF-EVGGKMKER--LGTAYYIAPE 176
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 71/156 (45%), Gaps = 21/156 (13%)
Query: 97 KKLDASKQ--PDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILH 154
++L +S++ EE +V+++ ++H N + L + T VL E S G L D L
Sbjct: 62 RRLXSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLA 121
Query: 155 GRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDV-- 212
++ L+ + + G+ YLH K I H D+K N+++ D +V
Sbjct: 122 EKES---------LTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPN 169
Query: 213 --AKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
K+ DF ++++ + A + GT + APE
Sbjct: 170 PRIKLIDFGIAHK---IEAGNEFKNIFGTPEFVAPE 202
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 87/201 (43%), Gaps = 25/201 (12%)
Query: 53 EVPAISVDELKEITENFGTNALIGEGSYGRVYYG-ILKSGHAAAIKKL--DASKQPDEEF 109
E P++ + K E+F + ++G+GS+G+V+ K+ AIK L D D+
Sbjct: 6 ERPSLQI---KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDD-- 60
Query: 110 LAQVSMVSR----LKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPG 165
+ +MV + L E+ +C T L + + + L+G + Q
Sbjct: 61 -VECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFF-------VMEYLNGGDLMYHIQSC 112
Query: 166 PVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAP 225
+ A GL++LH K I++RD+K N+L+ D KIADF + +
Sbjct: 113 HKFDLSRATFYAAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKE-- 167
Query: 226 DMAARLHSTRVLGTFGYHAPE 246
+M + GT Y APE
Sbjct: 168 NMLGDAKTNXFCGTPDYIAPE 188
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 72/165 (43%), Gaps = 18/165 (10%)
Query: 68 NFGTNALIGEGSYGRVYYGILKSGHAAAIKKL---DASKQPDEEFLAQVSMVSRLKHENF 124
NF T + E G ++ G + G+ +K L D S + +F + + H N
Sbjct: 13 NFLTK--LNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNV 69
Query: 125 VQLLGYCVDGTSR--VLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAK 182
+ +LG C + L + GSL+++LH V+ Q VK A+ A+
Sbjct: 70 LPVLGACQSPPAPHPTLITHWXPYGSLYNVLHEGTNF-------VVDQSQAVKFALDXAR 122
Query: 183 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKI--ADFDLSNQAP 225
G +LH +P I + S +V I +D A+I AD S Q+P
Sbjct: 123 GXAFLH-TLEPLIPRHALNSRSVXIDEDXTARISXADVKFSFQSP 166
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 87/182 (47%), Gaps = 13/182 (7%)
Query: 68 NFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQL 127
F ++G+GS+G+V+ ++K + ++L A K + A + + R++ + +
Sbjct: 25 QFELLKVLGQGSFGKVF--LVKKISGSDARQLYAMKVLKK---ATLKVRDRVRTKMERDI 79
Query: 128 LGYCVDGTSRVLAYEFASNGSLHDILHGRKG--VKGAQPGPVLSWQQRVKIAVGA-AKGL 184
L L Y F + G L+ IL +G + V+ ++ VK + A L
Sbjct: 80 LVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALAL 139
Query: 185 EYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHA 244
++LH II+RD+K N+L+ ++ K+ DF LS ++ D + +S GT Y A
Sbjct: 140 DHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FCGTVEYMA 194
Query: 245 PE 246
PE
Sbjct: 195 PE 196
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 87/182 (47%), Gaps = 13/182 (7%)
Query: 68 NFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQL 127
F ++G+GS+G+V+ ++K + ++L A K + A + + R++ + +
Sbjct: 25 QFELLKVLGQGSFGKVF--LVKKISGSDARQLYAMKVLKK---ATLKVRDRVRTKMERDI 79
Query: 128 LGYCVDGTSRVLAYEFASNGSLHDILHGRKG--VKGAQPGPVLSWQQRVKIAVG-AAKGL 184
L L Y F + G L+ IL +G + V+ ++ VK + A L
Sbjct: 80 LVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALAL 139
Query: 185 EYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHA 244
++LH II+RD+K N+L+ ++ K+ DF LS ++ D + +S GT Y A
Sbjct: 140 DHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FCGTVEYMA 194
Query: 245 PE 246
PE
Sbjct: 195 PE 196
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 87/182 (47%), Gaps = 13/182 (7%)
Query: 68 NFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQL 127
F ++G+GS+G+V+ ++K + ++L A K + A + + R++ + +
Sbjct: 26 QFELLKVLGQGSFGKVF--LVKKISGSDARQLYAMKVLKK---ATLKVRDRVRTKMERDI 80
Query: 128 LGYCVDGTSRVLAYEFASNGSLHDILHGRKG--VKGAQPGPVLSWQQRVKIAVG-AAKGL 184
L L Y F + G L+ IL +G + V+ ++ VK + A L
Sbjct: 81 LVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALAL 140
Query: 185 EYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHA 244
++LH II+RD+K N+L+ ++ K+ DF LS ++ D + +S GT Y A
Sbjct: 141 DHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FCGTVEYMA 195
Query: 245 PE 246
PE
Sbjct: 196 PE 197
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 73/154 (47%), Gaps = 21/154 (13%)
Query: 75 IGEGSYGRVYYGI-LKSGHAAAIKKL-DASKQPD--EEFLAQVSMVSRLK-HENFVQLLG 129
+G+G+YG V+ I ++G A+KK+ DA + + ++ +++ L HEN V LL
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLN 76
Query: 130 YCVDGTSR--VLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYL 187
R L +++ LH ++ +L + + K ++YL
Sbjct: 77 VLRADNDRDVYLVFDYME-TDLHAVIRAN----------ILEPVHKQYVVYQLIKVIKYL 125
Query: 188 HEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 221
H ++HRD+K SN+L+ + K+ADF LS
Sbjct: 126 HSGG---LLHRDMKPSNILLNAECHVKVADFGLS 156
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 73/160 (45%), Gaps = 21/160 (13%)
Query: 75 IGEGSYGRV---YYGIL--KSGHAAAIKKLDASKQPDEE--FLAQVSMVSRLKHENFVQL 127
+G+G++G V Y L +G A+K+L S PD++ F ++ ++ L + V+
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG-PDQQRDFQREIQILKALHSDFIVKY 89
Query: 128 LG--YCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLE 185
G Y S L E+ +G L D L + A + S Q KG+E
Sbjct: 90 RGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQ--------ICKGME 141
Query: 186 YLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAP 225
YL + +HRD+ + N+L+ + KIADF L+ P
Sbjct: 142 YLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLP 178
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 85/202 (42%), Gaps = 25/202 (12%)
Query: 55 PAISVDELKEITENFGTNALIGEGSYGRV---YYGILKSGHAAAIKKLDASKQPD--EEF 109
P + ++ ++ + + IGEG+YG V Y + K AIKK+ + +
Sbjct: 11 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKV--RVAIKKISPFEHQTYCQRT 68
Query: 110 LAQVSMVSRLKHENFV----QLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPG 165
L ++ ++ R +HEN + + ++ V + L+ +L +
Sbjct: 69 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-------- 120
Query: 166 PVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQA- 224
LS +GL+Y+H +++HRD+K SN+L+ KI DF L+ A
Sbjct: 121 --LSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVAD 175
Query: 225 PDMAARLHSTRVLGTFGYHAPE 246
PD T + T Y APE
Sbjct: 176 PDHDHTGFLTEYVATRWYRAPE 197
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 90/202 (44%), Gaps = 26/202 (12%)
Query: 50 QPIEVPAISVDELKEITENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQPDEE 108
QP+E+ V + +I E GT G++G V+ + +G+ A K + + D+E
Sbjct: 146 QPVEIKHDHVLDHYDIHEELGT------GAFGVVHRVTERATGNNFAAKFVMTPHESDKE 199
Query: 109 FL-AQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPV 167
+ ++ +S L+H V L D V+ YEF S G L + K A
Sbjct: 200 TVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFE--------KVADEHNK 251
Query: 168 LSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFD--DDVAKIADFDLSNQA- 224
+S + V+ KGL ++HE + +H D+K N++ + K+ DF L+
Sbjct: 252 MSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLD 308
Query: 225 PDMAARLHSTRVLGTFGYHAPE 246
P + ++ + GT + APE
Sbjct: 309 PKQSVKVTT----GTAEFAAPE 326
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 73/160 (45%), Gaps = 21/160 (13%)
Query: 75 IGEGSYGRV---YYGIL--KSGHAAAIKKLDASKQPDEE--FLAQVSMVSRLKHENFVQL 127
+G+G++G V Y L +G A+K+L S PD++ F ++ ++ L + V+
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG-PDQQRDFQREIQILKALHSDFIVKY 77
Query: 128 LG--YCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLE 185
G Y S L E+ +G L D L + A + S Q KG+E
Sbjct: 78 RGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQ--------ICKGME 129
Query: 186 YLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAP 225
YL + +HRD+ + N+L+ + KIADF L+ P
Sbjct: 130 YLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLP 166
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 85/202 (42%), Gaps = 25/202 (12%)
Query: 55 PAISVDELKEITENFGTNALIGEGSYGRV---YYGILKSGHAAAIKKLDASKQPD--EEF 109
P + ++ ++ + + IGEG+YG V Y + K AIKK+ + +
Sbjct: 11 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKV--RVAIKKISPFEHQTYCQRT 68
Query: 110 LAQVSMVSRLKHENFV----QLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPG 165
L ++ ++ R +HEN + + ++ V + L+ +L +
Sbjct: 69 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-------- 120
Query: 166 PVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQA- 224
LS +GL+Y+H +++HRD+K SN+L+ KI DF L+ A
Sbjct: 121 --LSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVAD 175
Query: 225 PDMAARLHSTRVLGTFGYHAPE 246
PD T + T Y APE
Sbjct: 176 PDHDHTGFLTEYVATRWYRAPE 197
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 85/202 (42%), Gaps = 25/202 (12%)
Query: 55 PAISVDELKEITENFGTNALIGEGSYGRV---YYGILKSGHAAAIKKLDASKQPD--EEF 109
P + ++ ++ + + IGEG+YG V Y + K AIKK+ + +
Sbjct: 15 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKV--RVAIKKISPFEHQTYCQRT 72
Query: 110 LAQVSMVSRLKHENFV----QLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPG 165
L ++ ++ R +HEN + + ++ V + L+ +L +
Sbjct: 73 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-------- 124
Query: 166 PVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQA- 224
LS +GL+Y+H +++HRD+K SN+L+ KI DF L+ A
Sbjct: 125 --LSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVAD 179
Query: 225 PDMAARLHSTRVLGTFGYHAPE 246
PD T + T Y APE
Sbjct: 180 PDHDHTGFLTEYVATRWYRAPE 201
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 89/202 (44%), Gaps = 26/202 (12%)
Query: 50 QPIEVPAISVDELKEITENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQPDEE 108
QP+E+ V + +I E GT G++G V+ + +G+ A K + + D+E
Sbjct: 40 QPVEIKHDHVLDHYDIHEELGT------GAFGVVHRVTERATGNNFAAKFVMTPHESDKE 93
Query: 109 FL-AQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPV 167
+ ++ +S L+H V L D V+ YEF S G L + K A
Sbjct: 94 TVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFE--------KVADEHNK 145
Query: 168 LSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFD--DDVAKIADFDLSNQA- 224
+S + V+ KGL ++HE + +H D+K N++ + K+ DF L+
Sbjct: 146 MSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLD 202
Query: 225 PDMAARLHSTRVLGTFGYHAPE 246
P + ++ GT + APE
Sbjct: 203 PKQSVKV----TTGTAEFAAPE 220
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 85/202 (42%), Gaps = 25/202 (12%)
Query: 55 PAISVDELKEITENFGTNALIGEGSYGRV---YYGILKSGHAAAIKKLDASKQPD--EEF 109
P + ++ ++ + + IGEG+YG V Y + K AIKK+ + +
Sbjct: 31 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKV--RVAIKKISPFEHQTYCQRT 88
Query: 110 LAQVSMVSRLKHENFV----QLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPG 165
L ++ ++ R +HEN + + ++ V + L+ +L +
Sbjct: 89 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-------- 140
Query: 166 PVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQA- 224
LS +GL+Y+H +++HRD+K SN+L+ KI DF L+ A
Sbjct: 141 --LSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 195
Query: 225 PDMAARLHSTRVLGTFGYHAPE 246
PD T + T Y APE
Sbjct: 196 PDHDHTGFLTEYVATRWYRAPE 217
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 73/160 (45%), Gaps = 21/160 (13%)
Query: 75 IGEGSYGRV---YYGIL--KSGHAAAIKKLDASKQPDEE--FLAQVSMVSRLKHENFVQL 127
+G+G++G V Y L +G A+K+L S PD++ F ++ ++ L + V+
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG-PDQQRDFQREIQILKALHSDFIVKY 76
Query: 128 LG--YCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLE 185
G Y S L E+ +G L D L + A + S Q KG+E
Sbjct: 77 RGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQ--------ICKGME 128
Query: 186 YLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAP 225
YL + +HRD+ + N+L+ + KIADF L+ P
Sbjct: 129 YLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLP 165
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 85/202 (42%), Gaps = 25/202 (12%)
Query: 55 PAISVDELKEITENFGTNALIGEGSYGRV---YYGILKSGHAAAIKKLDASKQPD--EEF 109
P + ++ ++ + + IGEG+YG V Y + K AIKK+ + +
Sbjct: 11 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKV--RVAIKKISPFEHQTYCQRT 68
Query: 110 LAQVSMVSRLKHENFV----QLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPG 165
L ++ ++ R +HEN + + ++ V + L+ +L +
Sbjct: 69 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-------- 120
Query: 166 PVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQA- 224
LS +GL+Y+H +++HRD+K SN+L+ KI DF L+ A
Sbjct: 121 --LSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKIXDFGLARVAD 175
Query: 225 PDMAARLHSTRVLGTFGYHAPE 246
PD T + T Y APE
Sbjct: 176 PDHDHTGFLTEYVATRWYRAPE 197
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 85/202 (42%), Gaps = 25/202 (12%)
Query: 55 PAISVDELKEITENFGTNALIGEGSYGRV---YYGILKSGHAAAIKKLDASKQPD--EEF 109
P + ++ ++ + + IGEG+YG V Y + K AIKK+ + +
Sbjct: 15 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKV--RVAIKKISPFEHQTYXQRT 72
Query: 110 LAQVSMVSRLKHENFV----QLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPG 165
L ++ ++ R +HEN + + ++ V + L+ +L +
Sbjct: 73 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-------- 124
Query: 166 PVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQA- 224
LS +GL+Y+H +++HRD+K SN+L+ KI DF L+ A
Sbjct: 125 --LSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVAD 179
Query: 225 PDMAARLHSTRVLGTFGYHAPE 246
PD T + T Y APE
Sbjct: 180 PDHDHTGFLTEYVATRWYRAPE 201
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 85/202 (42%), Gaps = 25/202 (12%)
Query: 55 PAISVDELKEITENFGTNALIGEGSYGRV---YYGILKSGHAAAIKKLDASKQPD--EEF 109
P + ++ ++ + + IGEG+YG V Y + K AIKK+ + +
Sbjct: 11 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKV--RVAIKKISPFEHQTYCQRT 68
Query: 110 LAQVSMVSRLKHENFV----QLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPG 165
L ++ ++ R +HEN + + ++ V + L+ +L +
Sbjct: 69 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-------- 120
Query: 166 PVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQA- 224
LS +GL+Y+H +++HRD+K SN+L+ KI DF L+ A
Sbjct: 121 --LSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 175
Query: 225 PDMAARLHSTRVLGTFGYHAPE 246
PD T + T Y APE
Sbjct: 176 PDHDHTGFLTEYVATRWYRAPE 197
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 85/202 (42%), Gaps = 25/202 (12%)
Query: 55 PAISVDELKEITENFGTNALIGEGSYGRV---YYGILKSGHAAAIKKLDASKQPD--EEF 109
P + ++ ++ + + IGEG+YG V Y + K AIKK+ + +
Sbjct: 13 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKV--RVAIKKISPFEHQTYCQRT 70
Query: 110 LAQVSMVSRLKHENFV----QLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPG 165
L ++ ++ R +HEN + + ++ V + L+ +L +
Sbjct: 71 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-------- 122
Query: 166 PVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQA- 224
LS +GL+Y+H +++HRD+K SN+L+ KI DF L+ A
Sbjct: 123 --LSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 177
Query: 225 PDMAARLHSTRVLGTFGYHAPE 246
PD T + T Y APE
Sbjct: 178 PDHDHTGFLTEYVATRWYRAPE 199
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 85/202 (42%), Gaps = 25/202 (12%)
Query: 55 PAISVDELKEITENFGTNALIGEGSYGRV---YYGILKSGHAAAIKKLDASKQPD--EEF 109
P + ++ ++ + + IGEG+YG V Y + K AIKK+ + +
Sbjct: 19 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKV--RVAIKKISPFEHQTYCQRT 76
Query: 110 LAQVSMVSRLKHENFV----QLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPG 165
L ++ ++ R +HEN + + ++ V + L+ +L +
Sbjct: 77 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-------- 128
Query: 166 PVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQA- 224
LS +GL+Y+H +++HRD+K SN+L+ KI DF L+ A
Sbjct: 129 --LSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 183
Query: 225 PDMAARLHSTRVLGTFGYHAPE 246
PD T + T Y APE
Sbjct: 184 PDHDHTGFLTEYVATRWYRAPE 205
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 85/202 (42%), Gaps = 25/202 (12%)
Query: 55 PAISVDELKEITENFGTNALIGEGSYGRV---YYGILKSGHAAAIKKLDASKQPD--EEF 109
P + ++ ++ + + IGEG+YG V Y + K AIKK+ + +
Sbjct: 11 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKV--RVAIKKISPFEHQTYCQRT 68
Query: 110 LAQVSMVSRLKHENFV----QLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPG 165
L ++ ++ R +HEN + + ++ V + L+ +L +
Sbjct: 69 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-------- 120
Query: 166 PVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQA- 224
LS +GL+Y+H +++HRD+K SN+L+ KI DF L+ A
Sbjct: 121 --LSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 175
Query: 225 PDMAARLHSTRVLGTFGYHAPE 246
PD T + T Y APE
Sbjct: 176 PDHDHTGFLTEYVATRWYRAPE 197
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Query: 175 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 234
KIAV K LE+LH K +IHRD+K SNVLI K+ DF +S D A+
Sbjct: 113 KIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDA 170
Query: 235 RVLGTFGYHAPE 246
G Y APE
Sbjct: 171 ---GCKPYMAPE 179
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 85/202 (42%), Gaps = 25/202 (12%)
Query: 55 PAISVDELKEITENFGTNALIGEGSYGRV---YYGILKSGHAAAIKKLDASKQPD--EEF 109
P + ++ ++ + + IGEG+YG V Y + K AIKK+ + +
Sbjct: 16 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKV--RVAIKKISPFEHQTYCQRT 73
Query: 110 LAQVSMVSRLKHENFV----QLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPG 165
L ++ ++ R +HEN + + ++ V + L+ +L +
Sbjct: 74 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-------- 125
Query: 166 PVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQA- 224
LS +GL+Y+H +++HRD+K SN+L+ KI DF L+ A
Sbjct: 126 --LSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 180
Query: 225 PDMAARLHSTRVLGTFGYHAPE 246
PD T + T Y APE
Sbjct: 181 PDHDHTGFLTEYVATRWYRAPE 202
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 85/202 (42%), Gaps = 25/202 (12%)
Query: 55 PAISVDELKEITENFGTNALIGEGSYGRV---YYGILKSGHAAAIKKLDASKQPD--EEF 109
P + ++ ++ + + IGEG+YG V Y + K AIKK+ + +
Sbjct: 17 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKV--RVAIKKISPFEHQTYCQRT 74
Query: 110 LAQVSMVSRLKHENFV----QLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPG 165
L ++ ++ R +HEN + + ++ V + L+ +L +
Sbjct: 75 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-------- 126
Query: 166 PVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQA- 224
LS +GL+Y+H +++HRD+K SN+L+ KI DF L+ A
Sbjct: 127 --LSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 181
Query: 225 PDMAARLHSTRVLGTFGYHAPE 246
PD T + T Y APE
Sbjct: 182 PDHDHTGFLTEYVATRWYRAPE 203
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 85/202 (42%), Gaps = 25/202 (12%)
Query: 55 PAISVDELKEITENFGTNALIGEGSYGRV---YYGILKSGHAAAIKKLDASKQPD--EEF 109
P + ++ ++ + + IGEG+YG V Y + K AIKK+ + +
Sbjct: 8 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKV--RVAIKKISPFEHQTYCQRT 65
Query: 110 LAQVSMVSRLKHENFV----QLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPG 165
L ++ ++ R +HEN + + ++ V + L+ +L +
Sbjct: 66 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-------- 117
Query: 166 PVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQA- 224
LS +GL+Y+H +++HRD+K SN+L+ KI DF L+ A
Sbjct: 118 --LSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 172
Query: 225 PDMAARLHSTRVLGTFGYHAPE 246
PD T + T Y APE
Sbjct: 173 PDHDHTGFLTEYVATRWYRAPE 194
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 85/202 (42%), Gaps = 25/202 (12%)
Query: 55 PAISVDELKEITENFGTNALIGEGSYGRV---YYGILKSGHAAAIKKLDASKQPD--EEF 109
P + ++ ++ + + IGEG+YG V Y + K AIKK+ + +
Sbjct: 15 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKV--RVAIKKISPFEHQTYCQRT 72
Query: 110 LAQVSMVSRLKHENFV----QLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPG 165
L ++ ++ R +HEN + + ++ V + L+ +L +
Sbjct: 73 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-------- 124
Query: 166 PVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQA- 224
LS +GL+Y+H +++HRD+K SN+L+ KI DF L+ A
Sbjct: 125 --LSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 179
Query: 225 PDMAARLHSTRVLGTFGYHAPE 246
PD T + T Y APE
Sbjct: 180 PDHDHTGFLTEYVATRWYRAPE 201
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 85/202 (42%), Gaps = 25/202 (12%)
Query: 55 PAISVDELKEITENFGTNALIGEGSYGRV---YYGILKSGHAAAIKKLDASKQPD--EEF 109
P + ++ ++ + + IGEG+YG V Y + K AIKK+ + +
Sbjct: 9 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKV--RVAIKKISPFEHQTYCQRT 66
Query: 110 LAQVSMVSRLKHENFV----QLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPG 165
L ++ ++ R +HEN + + ++ V + L+ +L +
Sbjct: 67 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-------- 118
Query: 166 PVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQA- 224
LS +GL+Y+H +++HRD+K SN+L+ KI DF L+ A
Sbjct: 119 --LSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 173
Query: 225 PDMAARLHSTRVLGTFGYHAPE 246
PD T + T Y APE
Sbjct: 174 PDHDHTGFLTEYVATRWYRAPE 195
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 80/190 (42%), Gaps = 42/190 (22%)
Query: 52 IEVPAISVDELKEITENFGTNALIGEGSYGRVYYGIL-KSGHAAAIKKLDASKQPDEEFL 110
+ P D +E++ + +IG GS+G VY L SG AIKK+ K+
Sbjct: 7 VATPGQGPDRPQEVS--YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-- 62
Query: 111 AQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILH---------------G 155
++ ++ +L H N V+L Y F S+G D+++
Sbjct: 63 -ELQIMRKLDHCNIVRL------------RYFFYSSGEKKDVVYLNLVLDYVPETVYRVA 109
Query: 156 RKGVKGAQPGPVLSWQQRVKIAV-GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDD-VA 213
R + Q PV+ VK+ + + L Y+H I HRDIK N+L+ D V
Sbjct: 110 RHYSRAKQTLPVIY----VKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVL 162
Query: 214 KIADFDLSNQ 223
K+ DF + Q
Sbjct: 163 KLCDFGSAKQ 172
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 60/128 (46%), Gaps = 13/128 (10%)
Query: 121 HENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGA 180
H F+ L Y + + + NG DI + V PG +Q+ I A
Sbjct: 243 HSRFIVSLAYAFETKTDLCLVMTIMNGG--DIRYHIYNVDEDNPG----FQEPRAIFYTA 296
Query: 181 --AKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLG 238
GLE+LH++ +II+RD+K NVL+ DD +I+D L+ + A + + G
Sbjct: 297 QIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVEL--KAGQTKTKGYAG 351
Query: 239 TFGYHAPE 246
T G+ APE
Sbjct: 352 TPGFMAPE 359
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 60/128 (46%), Gaps = 13/128 (10%)
Query: 121 HENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGA 180
H F+ L Y + + + NG DI + V PG +Q+ I A
Sbjct: 243 HSRFIVSLAYAFETKTDLCLVMTIMNGG--DIRYHIYNVDEDNPG----FQEPRAIFYTA 296
Query: 181 --AKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLG 238
GLE+LH++ +II+RD+K NVL+ DD +I+D L+ + A + + G
Sbjct: 297 QIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVEL--KAGQTKTKGYAG 351
Query: 239 TFGYHAPE 246
T G+ APE
Sbjct: 352 TPGFMAPE 359
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 60/128 (46%), Gaps = 13/128 (10%)
Query: 121 HENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGA 180
H F+ L Y + + + NG DI + V PG +Q+ I A
Sbjct: 243 HSRFIVSLAYAFETKTDLCLVMTIMNGG--DIRYHIYNVDEDNPG----FQEPRAIFYTA 296
Query: 181 --AKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLG 238
GLE+LH++ +II+RD+K NVL+ DD +I+D L+ + A + + G
Sbjct: 297 QIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVEL--KAGQTKTKGYAG 351
Query: 239 TFGYHAPE 246
T G+ APE
Sbjct: 352 TPGFMAPE 359
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 60/128 (46%), Gaps = 13/128 (10%)
Query: 121 HENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGA 180
H F+ L Y + + + NG DI + V PG +Q+ I A
Sbjct: 243 HSRFIVSLAYAFETKTDLCLVMTIMNGG--DIRYHIYNVDEDNPG----FQEPRAIFYTA 296
Query: 181 --AKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLG 238
GLE+LH++ +II+RD+K NVL+ DD +I+D L+ + A + + G
Sbjct: 297 QIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVEL--KAGQTKTKGYAG 351
Query: 239 TFGYHAPE 246
T G+ APE
Sbjct: 352 TPGFMAPE 359
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 85/202 (42%), Gaps = 25/202 (12%)
Query: 55 PAISVDELKEITENFGTNALIGEGSYGRV---YYGILKSGHAAAIKKLDASKQPD--EEF 109
P + ++ ++ + + IGEG+YG V Y + K AIKK+ + +
Sbjct: 15 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKV--RVAIKKISPFEHQTYCQRT 72
Query: 110 LAQVSMVSRLKHENFV----QLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPG 165
L ++ ++ R +HEN + + ++ V + L+ +L +
Sbjct: 73 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQH-------- 124
Query: 166 PVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQA- 224
LS +GL+Y+H +++HRD+K SN+L+ KI DF L+ A
Sbjct: 125 --LSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 179
Query: 225 PDMAARLHSTRVLGTFGYHAPE 246
PD T + T Y APE
Sbjct: 180 PDHDHTGFLTEYVATRWYRAPE 201
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 85/202 (42%), Gaps = 25/202 (12%)
Query: 55 PAISVDELKEITENFGTNALIGEGSYGRV---YYGILKSGHAAAIKKLDASKQPD--EEF 109
P + ++ ++ + + IGEG+YG V Y + K AIKK+ + +
Sbjct: 9 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKV--RVAIKKISPFEHQTYCQRT 66
Query: 110 LAQVSMVSRLKHENFV----QLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPG 165
L ++ ++ R +HEN + + ++ V + L+ +L +
Sbjct: 67 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-------- 118
Query: 166 PVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQA- 224
LS +GL+Y+H +++HRD+K SN+L+ KI DF L+ A
Sbjct: 119 --LSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 173
Query: 225 PDMAARLHSTRVLGTFGYHAPE 246
PD T + T Y APE
Sbjct: 174 PDHDHTGFLTEYVATRWYRAPE 195
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 95/214 (44%), Gaps = 26/214 (12%)
Query: 12 MHKAADNGNAYMVKSSAGTDGAY--HASEAAPKGAQAVKVQPIE-VPAISVDELKEITEN 68
+ + +G A+ + S A T A + E +PK V E + + + +E+ +
Sbjct: 36 LQGSVSSGQAHSLTSLAKTWAARGSRSREPSPKTEDNEGVLLTEKLKPVDYEYREEV--H 93
Query: 69 FGTNAL-IGEGSYGRVYYGILK-SGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQ 126
+ T+ L +G GS+G V+ K +G A+KK+ EE +A + S V
Sbjct: 94 WATHQLRLGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAEELMACAGLTS----PRIVP 149
Query: 127 LLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAA-KGLE 185
L G +G + E GSL ++ +G P + R +G A +GLE
Sbjct: 150 LYGAVREGPWVNIFMELLEGGSLGQLVK----EQGCLP------EDRALYYLGQALEGLE 199
Query: 186 YLHEKADPHIIHRDIKSSNVLIFDDDV-AKIADF 218
YLH + I+H D+K+ NVL+ D A + DF
Sbjct: 200 YLHSR---RILHGDVKADNVLLSSDGSHAALCDF 230
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 77/189 (40%), Gaps = 22/189 (11%)
Query: 64 EITENFGTNALIGEGSYGRVYYGILKSGHAA-AIKKLDASKQPD-EEFLAQVSMVSRLKH 121
+I + + IG GS+G V + K A KK+ D + F ++ ++ L H
Sbjct: 6 DINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDH 65
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHD-ILHGRKGVKGAQPGPVLSWQQRVKIAVGA 180
N ++L D T L E + G L + ++H R V +I
Sbjct: 66 PNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKR----------VFRESDAARIMKDV 115
Query: 181 AKGLEYLHEKADPHIIHRDIKSSNVLIFD---DDVAKIADFDLSNQAPDMAARLHSTRVL 237
+ Y H+ ++ HRD+K N L D K+ DF L+ A ++ T+V
Sbjct: 116 LSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLA--ARFKPGKMMRTKV- 169
Query: 238 GTFGYHAPE 246
GT Y +P+
Sbjct: 170 GTPYYVSPQ 178
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 71/155 (45%), Gaps = 21/155 (13%)
Query: 68 NFGTNAL-IGEGSYGRVYYGILK-SGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFV 125
++ T+ L +G GS+G V+ K +G A+KK+ EE +A + S V
Sbjct: 74 HWATHQLRLGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAEELMACAGLTS----PRIV 129
Query: 126 QLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAA-KGL 184
L G +G + E GSL ++ +G P + R +G A +GL
Sbjct: 130 PLYGAVREGPWVNIFMELLEGGSLGQLVK----EQGCLP------EDRALYYLGQALEGL 179
Query: 185 EYLHEKADPHIIHRDIKSSNVLIFDDDV-AKIADF 218
EYLH + I+H D+K+ NVL+ D A + DF
Sbjct: 180 EYLHSR---RILHGDVKADNVLLSSDGSHAALCDF 211
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 71/158 (44%), Gaps = 23/158 (14%)
Query: 74 LIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQ-PDEEFLAQVSMVSRLK-HENFVQLLGY 130
++ EG + VY + SG A+K+L ++++ + + +V + +L H N VQ +
Sbjct: 35 VLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQ---F 91
Query: 131 CV----------DGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGA 180
C G + L G L + L K GP LS +KI
Sbjct: 92 CSAASIGKEESDTGQAEFLLLTELCKGQLVEFLK-----KMESRGP-LSCDTVLKIFYQT 145
Query: 181 AKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADF 218
+ ++++H + P IIHRD+K N+L+ + K+ DF
Sbjct: 146 CRAVQHMHRQKPP-IIHRDLKVENLLLSNQGTIKLCDF 182
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 77/189 (40%), Gaps = 22/189 (11%)
Query: 64 EITENFGTNALIGEGSYGRVYYGILKSGHAA-AIKKLDASKQPD-EEFLAQVSMVSRLKH 121
+I + + IG GS+G V + K A KK+ D + F ++ ++ L H
Sbjct: 23 DINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDH 82
Query: 122 ENFVQLLGYCVDGTSRVLAYEFASNGSLHD-ILHGRKGVKGAQPGPVLSWQQRVKIAVGA 180
N ++L D T L E + G L + ++H R V +I
Sbjct: 83 PNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKR----------VFRESDAARIMKDV 132
Query: 181 AKGLEYLHEKADPHIIHRDIKSSNVLIFD---DDVAKIADFDLSNQAPDMAARLHSTRVL 237
+ Y H+ ++ HRD+K N L D K+ DF L+ A ++ T+V
Sbjct: 133 LSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLA--ARFKPGKMMRTKV- 186
Query: 238 GTFGYHAPE 246
GT Y +P+
Sbjct: 187 GTPYYVSPQ 195
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 81/199 (40%), Gaps = 21/199 (10%)
Query: 53 EVPAISVDELKEITENFGTNALIGEGSYGRVYYGI---LKSGHAAAI--KKLDASKQPDE 107
E+P + VD + + +G+G + + Y K A + K + E
Sbjct: 14 EIPDVLVDP--RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKE 71
Query: 108 EFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPV 167
+ ++++ L + + V G+ D + E SL ++ RK V +P
Sbjct: 72 KMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAV--TEPEAR 129
Query: 168 LSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDM 227
+Q ++ G++YLH +IHRD+K N+ + DD KI DF L+ +
Sbjct: 130 YFMRQTIQ-------GVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFD 179
Query: 228 AARLHSTRVLGTFGYHAPE 246
R + GT Y APE
Sbjct: 180 GER--KKDLCGTPNYIAPE 196
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 85/202 (42%), Gaps = 25/202 (12%)
Query: 55 PAISVDELKEITENFGTNALIGEGSYGRV---YYGILKSGHAAAIKKLDASKQPD--EEF 109
P + ++ ++ + + IGEG+YG V Y + K AI+K+ + +
Sbjct: 15 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKV--RVAIRKISPFEHQTYCQRT 72
Query: 110 LAQVSMVSRLKHENFV----QLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPG 165
L ++ ++ R +HEN + + ++ V + L+ +L +
Sbjct: 73 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-------- 124
Query: 166 PVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQA- 224
LS +GL+Y+H +++HRD+K SN+L+ KI DF L+ A
Sbjct: 125 --LSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 179
Query: 225 PDMAARLHSTRVLGTFGYHAPE 246
PD T + T Y APE
Sbjct: 180 PDHDHTGFLTEYVATRWYRAPE 201
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 74/169 (43%), Gaps = 26/169 (15%)
Query: 64 EITENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKL--------DASKQPDEEFLAQVS 114
+I + + LIG GSYG V K AIKK+ D + L +++
Sbjct: 50 QIPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKR-----ILREIA 104
Query: 115 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILH-GRKGVKGAQPGPVLSWQQR 173
+++RL H++ V++L V+ + L+ +L K PV +
Sbjct: 105 ILNRLNHDHVVKVLDI-------VIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELH 157
Query: 174 VK-IAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 221
+K + G++Y+H I+HRD+K +N L+ D K+ DF L+
Sbjct: 158 IKTLLYNLLVGVKYVHSAG---ILHRDLKPANCLVNQDCSVKVCDFGLA 203
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 72/160 (45%), Gaps = 21/160 (13%)
Query: 75 IGEGSYGRV---YYGIL--KSGHAAAIKKLDASKQPDEE--FLAQVSMVSRLKHENFVQL 127
+G+G++G V Y L +G A+K+L S PD++ F ++ ++ L + V+
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG-PDQQRDFQREIQILKALHSDFIVKY 73
Query: 128 LG--YCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLE 185
G Y L E+ +G L D L + A + S Q KG+E
Sbjct: 74 RGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQ--------ICKGME 125
Query: 186 YLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAP 225
YL + +HRD+ + N+L+ + KIADF L+ P
Sbjct: 126 YLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLP 162
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 61/140 (43%), Gaps = 14/140 (10%)
Query: 107 EEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGP 166
E+ ++S+ L H++ V G+ D + E SL ++ RK + +P
Sbjct: 66 EKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKAL--TEPEA 123
Query: 167 VLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
+Q V G +YLH +IHRD+K N+ + +D KI DF L+ +
Sbjct: 124 RYYLRQIVL-------GCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY 173
Query: 227 MAARLHSTRVLGTFGYHAPE 246
R + + GT Y APE
Sbjct: 174 DGERKKT--LCGTPNYIAPE 191
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 61/140 (43%), Gaps = 14/140 (10%)
Query: 107 EEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGP 166
E+ ++S+ L H++ V G+ D + E SL ++ RK + +P
Sbjct: 62 EKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKAL--TEPEA 119
Query: 167 VLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
+Q V G +YLH +IHRD+K N+ + +D KI DF L+ +
Sbjct: 120 RYYLRQIVL-------GCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY 169
Query: 227 MAARLHSTRVLGTFGYHAPE 246
R + + GT Y APE
Sbjct: 170 DGERKKT--LCGTPNYIAPE 187
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Query: 175 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHST 234
KIAV K LE+LH K +IHRD+K SNVLI K DF +S D A+
Sbjct: 140 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDA 197
Query: 235 RVLGTFGYHAPE 246
G Y APE
Sbjct: 198 ---GCKPYXAPE 206
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 61/140 (43%), Gaps = 14/140 (10%)
Query: 107 EEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGP 166
E+ ++S+ L H++ V G+ D + E SL ++ RK + +P
Sbjct: 62 EKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKAL--TEPEA 119
Query: 167 VLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
+Q V G +YLH +IHRD+K N+ + +D KI DF L+ +
Sbjct: 120 RYYLRQIVL-------GCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY 169
Query: 227 MAARLHSTRVLGTFGYHAPE 246
R + + GT Y APE
Sbjct: 170 DGERKKT--LCGTPNYIAPE 187
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 64/144 (44%), Gaps = 19/144 (13%)
Query: 107 EEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGP 166
E+ +VS++ ++H N + L + T +L E + G L D L ++
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-------- 110
Query: 167 VLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVA----KIADFDLSN 222
L+ ++ + G+ YLH I H D+K N+++ D +V KI DF L++
Sbjct: 111 -LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166
Query: 223 QAPDMAARLHSTRVLGTFGYHAPE 246
+ D + + GT + APE
Sbjct: 167 KI-DFGNEFKN--IFGTPAFVAPE 187
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 82/198 (41%), Gaps = 31/198 (15%)
Query: 63 KEITENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASK---------QPDEEFLAQ 112
K + + + + +G G+ G V K+ AIK + K P +
Sbjct: 6 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETE 65
Query: 113 VSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQ 172
+ ++ +L H +++ + D + E G L D + G K +K A L + Q
Sbjct: 66 IEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCK--LYFYQ 122
Query: 173 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIF---DDDVAKIADFDLSNQAPDMAA 229
+ +AV +YLHE IIHRD+K NVL+ +D + KI DF S +
Sbjct: 123 ML-LAV------QYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSK----ILG 168
Query: 230 RLHSTRVL-GTFGYHAPE 246
R L GT Y APE
Sbjct: 169 ETSLMRTLCGTPTYLAPE 186
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 64/144 (44%), Gaps = 19/144 (13%)
Query: 107 EEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGP 166
E+ +VS++ ++H N + L + T +L E + G L D L ++
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-------- 110
Query: 167 VLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVA----KIADFDLSN 222
L+ ++ + G+ YLH I H D+K N+++ D +V KI DF L++
Sbjct: 111 -LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166
Query: 223 QAPDMAARLHSTRVLGTFGYHAPE 246
+ D + + GT + APE
Sbjct: 167 KI-DFGNEFKN--IFGTPEFVAPE 187
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 82/198 (41%), Gaps = 31/198 (15%)
Query: 63 KEITENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASK---------QPDEEFLAQ 112
K + + + + +G G+ G V K+ AIK + K P +
Sbjct: 6 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETE 65
Query: 113 VSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQ 172
+ ++ +L H +++ + D + E G L D + G K +K A L + Q
Sbjct: 66 IEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCK--LYFYQ 122
Query: 173 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIF---DDDVAKIADFDLSNQAPDMAA 229
+ +AV +YLHE IIHRD+K NVL+ +D + KI DF S +
Sbjct: 123 ML-LAV------QYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSK----ILG 168
Query: 230 RLHSTRVL-GTFGYHAPE 246
R L GT Y APE
Sbjct: 169 ETSLMRTLCGTPTYLAPE 186
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 64/144 (44%), Gaps = 19/144 (13%)
Query: 107 EEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGP 166
E+ +VS++ ++H N + L + T +L E + G L D L ++
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-------- 110
Query: 167 VLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVA----KIADFDLSN 222
L+ ++ + G+ YLH I H D+K N+++ D +V KI DF L++
Sbjct: 111 -LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166
Query: 223 QAPDMAARLHSTRVLGTFGYHAPE 246
+ D + + GT + APE
Sbjct: 167 KI-DFGNEFKN--IFGTPEFVAPE 187
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 64/144 (44%), Gaps = 19/144 (13%)
Query: 107 EEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGP 166
E+ +VS++ ++H N + L + T +L E + G L D L ++
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-------- 110
Query: 167 VLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVA----KIADFDLSN 222
L+ ++ + G+ YLH I H D+K N+++ D +V KI DF L++
Sbjct: 111 -LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166
Query: 223 QAPDMAARLHSTRVLGTFGYHAPE 246
+ D + + GT + APE
Sbjct: 167 KI-DFGNEFKN--IFGTPEFVAPE 187
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 64/144 (44%), Gaps = 19/144 (13%)
Query: 107 EEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGP 166
E+ +VS++ ++H N + L + T +L E + G L D L ++
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-------- 110
Query: 167 VLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVA----KIADFDLSN 222
L+ ++ + G+ YLH I H D+K N+++ D +V KI DF L++
Sbjct: 111 -LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166
Query: 223 QAPDMAARLHSTRVLGTFGYHAPE 246
+ D + + GT + APE
Sbjct: 167 KI-DFGNEFKN--IFGTPEFVAPE 187
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 64/144 (44%), Gaps = 19/144 (13%)
Query: 107 EEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGP 166
E+ +VS++ ++H N + L + T +L E + G L D L ++
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-------- 110
Query: 167 VLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVA----KIADFDLSN 222
L+ ++ + G+ YLH I H D+K N+++ D +V KI DF L++
Sbjct: 111 -LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166
Query: 223 QAPDMAARLHSTRVLGTFGYHAPE 246
+ D + + GT + APE
Sbjct: 167 KI-DFGNEFKN--IFGTPEFVAPE 187
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 78/160 (48%), Gaps = 13/160 (8%)
Query: 94 AAIKKLDAS-KQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDI 152
AIKK+ + Q + L ++ ++ RL H+N V++ S+ L + S L+ +
Sbjct: 39 VAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQ-LTDDVGSLTELNSV 97
Query: 153 LHGRKGVKG-----AQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLI 207
++ ++ + GP+L R+ +GL+Y+H +++HRD+K +N+ I
Sbjct: 98 YIVQEYMETDLANVLEQGPLLEEHARL-FMYQLLRGLKYIHSA---NVLHRDLKPANLFI 153
Query: 208 FDDD-VAKIADFDLSN-QAPDMAARLHSTRVLGTFGYHAP 245
+D V KI DF L+ P + + H + L T Y +P
Sbjct: 154 NTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSP 193
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 82/198 (41%), Gaps = 31/198 (15%)
Query: 63 KEITENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASK---------QPDEEFLAQ 112
K + + + + +G G+ G V K+ AIK + K P +
Sbjct: 6 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETE 65
Query: 113 VSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQ 172
+ ++ +L H +++ + D + E G L D + G K +K A L + Q
Sbjct: 66 IEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCK--LYFYQ 122
Query: 173 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIF---DDDVAKIADFDLSNQAPDMAA 229
+ +AV +YLHE IIHRD+K NVL+ +D + KI DF S +
Sbjct: 123 ML-LAV------QYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSK----ILG 168
Query: 230 RLHSTRVL-GTFGYHAPE 246
R L GT Y APE
Sbjct: 169 ETSLMRTLCGTPTYLAPE 186
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 82/198 (41%), Gaps = 31/198 (15%)
Query: 63 KEITENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASK---------QPDEEFLAQ 112
K + + + + +G G+ G V K+ AIK + K P +
Sbjct: 5 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETE 64
Query: 113 VSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQ 172
+ ++ +L H +++ + D + E G L D + G K +K A L + Q
Sbjct: 65 IEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCK--LYFYQ 121
Query: 173 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIF---DDDVAKIADFDLSNQAPDMAA 229
+ +AV +YLHE IIHRD+K NVL+ +D + KI DF S +
Sbjct: 122 ML-LAV------QYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSK----ILG 167
Query: 230 RLHSTRVL-GTFGYHAPE 246
R L GT Y APE
Sbjct: 168 ETSLMRTLCGTPTYLAPE 185
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 9/82 (10%)
Query: 139 LAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHR 198
+ + +L D ++ R ++ + G L I + A+ +E+LH K ++HR
Sbjct: 138 IQMQLCRKENLKDWMNRRCSLEDREHGVCLH------IFIQIAEAVEFLHSKG---LMHR 188
Query: 199 DIKSSNVLIFDDDVAKIADFDL 220
D+K SN+ DDV K+ DF L
Sbjct: 189 DLKPSNIFFTMDDVVKVGDFGL 210
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 64/144 (44%), Gaps = 19/144 (13%)
Query: 107 EEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGP 166
E+ +VS++ ++H N + L + T +L E + G L D L ++
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-------- 110
Query: 167 VLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVA----KIADFDLSN 222
L+ ++ + G+ YLH I H D+K N+++ D +V KI DF L++
Sbjct: 111 -LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166
Query: 223 QAPDMAARLHSTRVLGTFGYHAPE 246
+ D + + GT + APE
Sbjct: 167 KI-DFGNEFKN--IFGTPEFVAPE 187
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 64/144 (44%), Gaps = 19/144 (13%)
Query: 107 EEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGP 166
E+ +VS++ ++H N + L + T +L E + G L D L ++
Sbjct: 58 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-------- 109
Query: 167 VLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVA----KIADFDLSN 222
L+ ++ + G+ YLH I H D+K N+++ D +V KI DF L++
Sbjct: 110 -LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 165
Query: 223 QAPDMAARLHSTRVLGTFGYHAPE 246
+ D + + GT + APE
Sbjct: 166 KI-DFGNEFKN--IFGTPEFVAPE 186
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 64/144 (44%), Gaps = 19/144 (13%)
Query: 107 EEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGP 166
E+ +VS++ ++H N + L + T +L E + G L D L ++
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-------- 110
Query: 167 VLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVA----KIADFDLSN 222
L+ ++ + G+ YLH I H D+K N+++ D +V KI DF L++
Sbjct: 111 -LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166
Query: 223 QAPDMAARLHSTRVLGTFGYHAPE 246
+ D + + GT + APE
Sbjct: 167 KI-DFGNEFKN--IFGTPEFVAPE 187
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 64/144 (44%), Gaps = 19/144 (13%)
Query: 107 EEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGP 166
E+ +VS++ ++H N + L + T +L E + G L D L ++
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-------- 110
Query: 167 VLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVA----KIADFDLSN 222
L+ ++ + G+ YLH I H D+K N+++ D +V KI DF L++
Sbjct: 111 -LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166
Query: 223 QAPDMAARLHSTRVLGTFGYHAPE 246
+ D + + GT + APE
Sbjct: 167 KI-DFGNEFKN--IFGTPEFVAPE 187
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 64/144 (44%), Gaps = 19/144 (13%)
Query: 107 EEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGP 166
E+ +VS++ ++H N + L + T +L E + G L D L ++
Sbjct: 58 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-------- 109
Query: 167 VLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVA----KIADFDLSN 222
L+ ++ + G+ YLH I H D+K N+++ D +V KI DF L++
Sbjct: 110 -LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 165
Query: 223 QAPDMAARLHSTRVLGTFGYHAPE 246
+ D + + GT + APE
Sbjct: 166 KI-DFGNEFKN--IFGTPEFVAPE 186
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 82/198 (41%), Gaps = 31/198 (15%)
Query: 63 KEITENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASK---------QPDEEFLAQ 112
K + + + + +G G+ G V K+ AIK + K P +
Sbjct: 12 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETE 71
Query: 113 VSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQ 172
+ ++ +L H +++ + D + E G L D + G K +K A L + Q
Sbjct: 72 IEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCK--LYFYQ 128
Query: 173 RVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIF---DDDVAKIADFDLSNQAPDMAA 229
+ +AV +YLHE IIHRD+K NVL+ +D + KI DF S +
Sbjct: 129 ML-LAV------QYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSK----ILG 174
Query: 230 RLHSTRVL-GTFGYHAPE 246
R L GT Y APE
Sbjct: 175 ETSLMRTLCGTPTYLAPE 192
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 84/202 (41%), Gaps = 25/202 (12%)
Query: 55 PAISVDELKEITENFGTNALIGEGSYGRV---YYGILKSGHAAAIKKLDASKQPD--EEF 109
P + ++ ++ + + IGEG+YG V Y + K AIKK+ + +
Sbjct: 13 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKV--RVAIKKISPFEHQTYCQRT 70
Query: 110 LAQVSMVSRLKHENFV----QLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPG 165
L ++ ++ +HEN + + ++ V + L+ +L +
Sbjct: 71 LREIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-------- 122
Query: 166 PVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQA- 224
LS +GL+Y+H +++HRD+K SN+L+ KI DF L+ A
Sbjct: 123 --LSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTSDLKICDFGLARVAD 177
Query: 225 PDMAARLHSTRVLGTFGYHAPE 246
PD T + T Y APE
Sbjct: 178 PDHDHTGFLTEYVATRWYRAPE 199
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 62/141 (43%), Gaps = 16/141 (11%)
Query: 107 EEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGP 166
E+ ++S+ L H++ V G+ D + E SL ++ RK + +P
Sbjct: 86 EKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKAL--TEPEA 143
Query: 167 VLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
+Q V G +YLH +IHRD+K N+ + +D KI DF L+ +
Sbjct: 144 RYYLRQIVL-------GCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY 193
Query: 227 MAARLHSTRVL-GTFGYHAPE 246
R +VL GT Y APE
Sbjct: 194 DGER---KKVLCGTPNYIAPE 211
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 64/144 (44%), Gaps = 19/144 (13%)
Query: 107 EEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGP 166
E+ +VS++ ++H N + L + T +L E + G L D L ++
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-------- 110
Query: 167 VLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVA----KIADFDLSN 222
L+ ++ + G+ YLH I H D+K N+++ D +V KI DF L++
Sbjct: 111 -LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166
Query: 223 QAPDMAARLHSTRVLGTFGYHAPE 246
+ D + + GT + APE
Sbjct: 167 KI-DFGNEFKN--IFGTPEFVAPE 187
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 84/184 (45%), Gaps = 22/184 (11%)
Query: 74 LIGEGSYGRVYYGILK-SGHAAAIKKLDASK------QPDEEFLAQVSMVSRLKHENFVQ 126
+IG+G++ V I + +G A+K +D +K E+ + S+ LKH + V+
Sbjct: 31 VIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 90
Query: 127 LL-GYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLE 185
LL Y DG + +EF L + VK A G V S + L
Sbjct: 91 LLETYSSDGML-YMVFEFMDGADL-----CFEIVKRADAGFVYSEAVASHYMRQILEALR 144
Query: 186 YLHEKADPHIIHRDIKSSNVLIFDDDVA---KIADFDLSNQAPDMAARLHSTRVLGTFGY 242
Y H D +IIHRD+K NVL+ + + K+ DF ++ Q + + + RV GT +
Sbjct: 145 YCH---DNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGE-SGLVAGGRV-GTPHF 199
Query: 243 HAPE 246
APE
Sbjct: 200 MAPE 203
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 62/141 (43%), Gaps = 16/141 (11%)
Query: 107 EEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGP 166
E+ ++S+ L H++ V G+ D + E SL ++ RK + +P
Sbjct: 60 EKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKAL--TEPEA 117
Query: 167 VLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
+Q V G +YLH +IHRD+K N+ + +D KI DF L+ +
Sbjct: 118 RYYLRQIVL-------GCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY 167
Query: 227 MAARLHSTRVL-GTFGYHAPE 246
R +VL GT Y APE
Sbjct: 168 DGER---KKVLCGTPNYIAPE 185
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 62/141 (43%), Gaps = 16/141 (11%)
Query: 107 EEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGP 166
E+ ++S+ L H++ V G+ D + E SL ++ RK + +P
Sbjct: 84 EKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKAL--TEPEA 141
Query: 167 VLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 226
+Q V G +YLH +IHRD+K N+ + +D KI DF L+ +
Sbjct: 142 RYYLRQIVL-------GCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY 191
Query: 227 MAARLHSTRVL-GTFGYHAPE 246
R +VL GT Y APE
Sbjct: 192 DGER---KKVLCGTPNYIAPE 209
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 79/190 (41%), Gaps = 42/190 (22%)
Query: 52 IEVPAISVDELKEITENFGTNALIGEGSYGRVYYGIL-KSGHAAAIKKLDASKQPDEEFL 110
+ P D +E++ + +IG GS+G VY L SG AIKK+ K+
Sbjct: 86 VATPGQGPDRPQEVS--YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-- 141
Query: 111 AQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILH---------------G 155
++ ++ +L H N V+L Y F S+G D ++
Sbjct: 142 -ELQIMRKLDHCNIVRL------------RYFFYSSGEKKDEVYLNLVLDYVPETVYRVA 188
Query: 156 RKGVKGAQPGPVLSWQQRVKIAV-GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDD-VA 213
R + Q PV+ VK+ + + L Y+H I HRDIK N+L+ D V
Sbjct: 189 RHYSRAKQTLPVIY----VKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVL 241
Query: 214 KIADFDLSNQ 223
K+ DF + Q
Sbjct: 242 KLCDFGSAKQ 251
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 81/185 (43%), Gaps = 20/185 (10%)
Query: 68 NFGTNALIGEGSYGRVYYGILKSG---HAAAIKKLDASKQPD--EEFLAQVSMVSRLKHE 122
+F ++G+GS+G+V K +A I K D Q D E + + +++
Sbjct: 342 DFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKP 401
Query: 123 NFVQLLGYCVDGTSRV-LAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAA 181
F+ L C R+ E+ + G L + H ++ + +P V A A
Sbjct: 402 PFLTQLHSCFQTMDRLYFVMEYVNGGDL--MYHIQQVGRFKEPHAVF-------YAAEIA 452
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 241
GL +L K II+RD+K NV++ + KIADF + + ++ + + GT
Sbjct: 453 IGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKE--NIWDGVTTKXFCGTPD 507
Query: 242 YHAPE 246
Y APE
Sbjct: 508 YIAPE 512
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 80/178 (44%), Gaps = 21/178 (11%)
Query: 75 IGEGSYGRVYYGILKSGHAAAIKKLD---ASKQPDEEFLAQVSMVSRLKH--ENFVQLLG 129
IG G +V+ + + AIK ++ A Q + + +++ +++L+ + ++L
Sbjct: 20 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 79
Query: 130 YCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHE 189
Y + + E N L+ L +K + W+++ LE +H
Sbjct: 80 YEITDQYIYMVME-CGNIDLNSWLKKKKSID--------PWERKSY----WKNMLEAVHT 126
Query: 190 KADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQA-PDMAARLHSTRVLGTFGYHAPE 246
I+H D+K +N LI D + K+ DF ++NQ PD + + ++V GT Y PE
Sbjct: 127 IHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQV-GTVNYMPPE 182
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 64/144 (44%), Gaps = 19/144 (13%)
Query: 107 EEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGP 166
E+ +VS++ ++H N + L + T +L E + G L D L ++
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-------- 110
Query: 167 VLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVA----KIADFDLSN 222
L+ ++ + G+ YLH I H D+K N+++ D +V KI DF L++
Sbjct: 111 -LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166
Query: 223 QAPDMAARLHSTRVLGTFGYHAPE 246
+ D + + GT + APE
Sbjct: 167 KI-DFGNEFKN--IFGTPEFVAPE 187
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 79/190 (41%), Gaps = 42/190 (22%)
Query: 52 IEVPAISVDELKEITENFGTNALIGEGSYGRVYYGIL-KSGHAAAIKKLDASKQPDEEFL 110
+ P D +E++ + +IG GS+G VY L SG AIKK+ K+
Sbjct: 45 VATPGQGPDRPQEVS--YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-- 100
Query: 111 AQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILH---------------G 155
++ ++ +L H N V+L Y F S+G D ++
Sbjct: 101 -ELQIMRKLDHCNIVRL------------RYFFYSSGEKKDEVYLNLVLDYVPETVYRVA 147
Query: 156 RKGVKGAQPGPVLSWQQRVKIAV-GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDD-VA 213
R + Q PV+ VK+ + + L Y+H I HRDIK N+L+ D V
Sbjct: 148 RHYSRAKQTLPVIY----VKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVL 200
Query: 214 KIADFDLSNQ 223
K+ DF + Q
Sbjct: 201 KLCDFGSAKQ 210
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 83/200 (41%), Gaps = 43/200 (21%)
Query: 43 GAQAVKVQPI-EVPAISVDELKEITENFGTNALIGEGSYGRVYYGIL-KSGHAAAIKKLD 100
GA KV + P D +E++ + +IG GS+G VY L SG AIKK+
Sbjct: 1 GAMGSKVTTVVATPGQGPDRPQEVS--YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL 58
Query: 101 ASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILH------ 154
K+ ++ ++ +L H N V+L Y F S+G D ++
Sbjct: 59 QDKRFKNR---ELQIMRKLDHCNIVRL------------RYFFYSSGEKKDEVYLNLVLD 103
Query: 155 ---------GRKGVKGAQPGPVLSWQQRVKIAV-GAAKGLEYLHEKADPHIIHRDIKSSN 204
R + Q PV+ VK+ + + L Y+H I HRDIK N
Sbjct: 104 YVPETVYRVARHYSRAKQTLPVIY----VKLYMYQLFRSLAYIHSFG---ICHRDIKPQN 156
Query: 205 VLIFDDD-VAKIADFDLSNQ 223
+L+ D V K+ DF + Q
Sbjct: 157 LLLDPDTAVLKLCDFGSAKQ 176
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 79/190 (41%), Gaps = 42/190 (22%)
Query: 52 IEVPAISVDELKEITENFGTNALIGEGSYGRVYYGIL-KSGHAAAIKKLDASKQPDEEFL 110
+ P D +E++ + +IG GS+G VY L SG AIKK+ K+
Sbjct: 43 VATPGQGPDRPQEVS--YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-- 98
Query: 111 AQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILH---------------G 155
++ ++ +L H N V+L Y F S+G D ++
Sbjct: 99 -ELQIMRKLDHCNIVRL------------RYFFYSSGEKKDEVYLNLVLDYVPETVYRVA 145
Query: 156 RKGVKGAQPGPVLSWQQRVKIAV-GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDD-VA 213
R + Q PV+ VK+ + + L Y+H I HRDIK N+L+ D V
Sbjct: 146 RHYSRAKQTLPVIY----VKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVL 198
Query: 214 KIADFDLSNQ 223
K+ DF + Q
Sbjct: 199 KLCDFGSAKQ 208
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 79/190 (41%), Gaps = 42/190 (22%)
Query: 52 IEVPAISVDELKEITENFGTNALIGEGSYGRVYYGIL-KSGHAAAIKKLDASKQPDEEFL 110
+ P D +E++ + +IG GS+G VY L SG AIKK+ K+
Sbjct: 41 VATPGQGPDRPQEVS--YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-- 96
Query: 111 AQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILH---------------G 155
++ ++ +L H N V+L Y F S+G D ++
Sbjct: 97 -ELQIMRKLDHCNIVRL------------RYFFYSSGEKKDEVYLNLVLDYVPETVYRVA 143
Query: 156 RKGVKGAQPGPVLSWQQRVKIAV-GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDD-VA 213
R + Q PV+ VK+ + + L Y+H I HRDIK N+L+ D V
Sbjct: 144 RHYSRAKQTLPVIY----VKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVL 196
Query: 214 KIADFDLSNQ 223
K+ DF + Q
Sbjct: 197 KLCDFGSAKQ 206
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 63/138 (45%), Gaps = 18/138 (13%)
Query: 112 QVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQ 171
+++++ ++KH N V L G L + S G L D + KG + L +Q
Sbjct: 66 EIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI-VEKGFYTERDASRLIFQ 124
Query: 172 QRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIF---DDDVAKIADFDLSNQAPDMA 228
++YLH D I+HRD+K N+L + +D I+DF LS + D
Sbjct: 125 --------VLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLS-KMEDPG 172
Query: 229 ARLHSTRVLGTFGYHAPE 246
+ L + GT GY APE
Sbjct: 173 SVLSTA--CGTPGYVAPE 188
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 79/190 (41%), Gaps = 42/190 (22%)
Query: 52 IEVPAISVDELKEITENFGTNALIGEGSYGRVYYGIL-KSGHAAAIKKLDASKQPDEEFL 110
+ P D +E++ + +IG GS+G VY L SG AIKK+ K+
Sbjct: 35 VATPGQGPDRPQEVS--YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-- 90
Query: 111 AQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILH---------------G 155
++ ++ +L H N V+L Y F S+G D ++
Sbjct: 91 -ELQIMRKLDHCNIVRL------------RYFFYSSGEKKDEVYLNLVLDYVPETVYRVA 137
Query: 156 RKGVKGAQPGPVLSWQQRVKIAV-GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDD-VA 213
R + Q PV+ VK+ + + L Y+H I HRDIK N+L+ D V
Sbjct: 138 RHYSRAKQTLPVIY----VKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVL 190
Query: 214 KIADFDLSNQ 223
K+ DF + Q
Sbjct: 191 KLCDFGSAKQ 200
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 84/202 (41%), Gaps = 25/202 (12%)
Query: 55 PAISVDELKEITENFGTNALIGEGSYGRV---YYGILKSGHAAAIKKLDASKQPD--EEF 109
P + ++ ++ + + IGEG+YG V Y + K AIKK+ + +
Sbjct: 15 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKV--RVAIKKISPFEHQTYCQRT 72
Query: 110 LAQVSMVSRLKHENFV----QLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPG 165
L ++ ++ R +HEN + + ++ V + L+ +L +
Sbjct: 73 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-------- 124
Query: 166 PVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQA- 224
LS +GL+Y+H +++HRD+K SN+L+ KI DF L+ A
Sbjct: 125 --LSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 179
Query: 225 PDMAARLHSTRVLGTFGYHAPE 246
PD + T Y APE
Sbjct: 180 PDHDHTGFLXEXVATRWYRAPE 201
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 84/202 (41%), Gaps = 25/202 (12%)
Query: 55 PAISVDELKEITENFGTNALIGEGSYGRV---YYGILKSGHAAAIKKLDASKQPD--EEF 109
P + ++ ++ + + IGEG+YG V Y + K AIKK+ + +
Sbjct: 16 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKV--RVAIKKISPFEHQTYCQRT 73
Query: 110 LAQVSMVSRLKHENFV----QLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPG 165
L ++ ++ R +HEN + + ++ V + L+ +L +
Sbjct: 74 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-------- 125
Query: 166 PVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQA- 224
LS +GL+Y+H +++HRD+K SN+L+ KI DF L+ A
Sbjct: 126 --LSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 180
Query: 225 PDMAARLHSTRVLGTFGYHAPE 246
PD + T Y APE
Sbjct: 181 PDHDHTGFLXEXVATRWYRAPE 202
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 63/138 (45%), Gaps = 18/138 (13%)
Query: 112 QVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQ 171
+++++ ++KH N V L G L + S G L D + KG + L +Q
Sbjct: 66 EIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI-VEKGFYTERDASRLIFQ 124
Query: 172 QRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIF---DDDVAKIADFDLSNQAPDMA 228
++YLH D I+HRD+K N+L + +D I+DF LS + D
Sbjct: 125 --------VLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLS-KMEDPG 172
Query: 229 ARLHSTRVLGTFGYHAPE 246
+ L + GT GY APE
Sbjct: 173 SVLSTA--CGTPGYVAPE 188
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 87/206 (42%), Gaps = 31/206 (15%)
Query: 48 KVQPIEVPAISVDELKEITENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQPD 106
K++P++ E +E +G GS+G V+ K +G A+KK+
Sbjct: 45 KLKPVDY------EYREEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRV 98
Query: 107 EEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGP 166
EE +A + S V L G +G + E GSL ++ G P
Sbjct: 99 EELVACAGLSS----PRIVPLYGAVREGPWVNIFMELLEGGSLGQLIK----QMGCLP-- 148
Query: 167 VLSWQQRVKIAVGAA-KGLEYLHEKADPHIIHRDIKSSNVLIFDD-DVAKIADFD--LSN 222
+ R +G A +GLEYLH + I+H D+K+ NVL+ D A + DF L
Sbjct: 149 ----EDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCL 201
Query: 223 QAPDMAAR--LHSTRVLGTFGYHAPE 246
Q PD + L + GT + APE
Sbjct: 202 Q-PDGLGKSLLTGDYIPGTETHMAPE 226
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 80/178 (44%), Gaps = 21/178 (11%)
Query: 75 IGEGSYGRVYYGILKSGHAAAIKKLD---ASKQPDEEFLAQVSMVSRLKH--ENFVQLLG 129
IG G +V+ + + AIK ++ A Q + + +++ +++L+ + ++L
Sbjct: 16 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 75
Query: 130 YCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHE 189
Y + + E N L+ L +K + W+++ LE +H
Sbjct: 76 YEITDQYIYMVME-CGNIDLNSWLKKKKSID--------PWERKSY----WKNMLEAVHT 122
Query: 190 KADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQA-PDMAARLHSTRVLGTFGYHAPE 246
I+H D+K +N LI D + K+ DF ++NQ PD + + ++V GT Y PE
Sbjct: 123 IHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQV-GTVNYMPPE 178
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 63/138 (45%), Gaps = 18/138 (13%)
Query: 112 QVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQ 171
+++++ ++KH N V L G L + S G L D + KG + L +Q
Sbjct: 66 EIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI-VEKGFYTERDASRLIFQ 124
Query: 172 QRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIF---DDDVAKIADFDLSNQAPDMA 228
++YLH D I+HRD+K N+L + +D I+DF LS + D
Sbjct: 125 --------VLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLS-KMEDPG 172
Query: 229 ARLHSTRVLGTFGYHAPE 246
+ L + GT GY APE
Sbjct: 173 SVLSTA--CGTPGYVAPE 188
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 79/190 (41%), Gaps = 42/190 (22%)
Query: 52 IEVPAISVDELKEITENFGTNALIGEGSYGRVYYGIL-KSGHAAAIKKLDASKQPDEEFL 110
+ P D +E++ + +IG GS+G VY L SG AIKK+ K+
Sbjct: 41 VATPGQGPDRPQEVS--YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-- 96
Query: 111 AQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILH---------------G 155
++ ++ +L H N V+L Y F S+G D ++
Sbjct: 97 -ELQIMRKLDHCNIVRL------------RYFFYSSGEKKDEVYLNLVLDYVPETVYRVA 143
Query: 156 RKGVKGAQPGPVLSWQQRVKIAV-GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDD-VA 213
R + Q PV+ VK+ + + L Y+H I HRDIK N+L+ D V
Sbjct: 144 RHYSRAKQTLPVIY----VKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVL 196
Query: 214 KIADFDLSNQ 223
K+ DF + Q
Sbjct: 197 KLCDFGSAKQ 206
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 63/138 (45%), Gaps = 18/138 (13%)
Query: 112 QVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQ 171
+++++ ++KH N V L G L + S G L D + KG + L +Q
Sbjct: 66 EIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI-VEKGFYTERDASRLIFQ 124
Query: 172 QRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIF---DDDVAKIADFDLSNQAPDMA 228
++YLH D I+HRD+K N+L + +D I+DF LS + D
Sbjct: 125 --------VLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLS-KMEDPG 172
Query: 229 ARLHSTRVLGTFGYHAPE 246
+ L + GT GY APE
Sbjct: 173 SVLSTA--CGTPGYVAPE 188
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 88/202 (43%), Gaps = 42/202 (20%)
Query: 64 EITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEE----------FLAQV 113
E ++ + T + +G G++G V+ + K + + K ++ E+ ++
Sbjct: 21 EYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEI 80
Query: 114 SMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDIL-----HGRKGVKGAQPGPVL 168
+++SR++H N +++L + L E +GS D+ H R +P
Sbjct: 81 AILSRVEHANIIKVLDIFENQGFFQLVME--KHGSGLDLFAFIDRHPRLD----EPLASY 134
Query: 169 SWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMA 228
++Q V AVG YL K IIHRDIK N++I +D K+ DF A
Sbjct: 135 IFRQLVS-AVG------YLRLK---DIIHRDIKDENIVIAEDFTIKLIDF-------GSA 177
Query: 229 ARLHSTRVL----GTFGYHAPE 246
A L ++ GT Y APE
Sbjct: 178 AYLERGKLFYTFCGTIEYCAPE 199
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 79/190 (41%), Gaps = 42/190 (22%)
Query: 52 IEVPAISVDELKEITENFGTNALIGEGSYGRVYYGIL-KSGHAAAIKKLDASKQPDEEFL 110
+ P D +E++ + +IG GS+G VY L SG AIKK+ K+
Sbjct: 12 VATPGQGPDRPQEVS--YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-- 67
Query: 111 AQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILH---------------G 155
++ ++ +L H N V+L Y F S+G D ++
Sbjct: 68 -ELQIMRKLDHCNIVRL------------RYFFYSSGEKKDEVYLNLVLDYVPETVYRVA 114
Query: 156 RKGVKGAQPGPVLSWQQRVKIAV-GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDD-VA 213
R + Q PV+ VK+ + + L Y+H I HRDIK N+L+ D V
Sbjct: 115 RHYSRAKQTLPVIY----VKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVL 167
Query: 214 KIADFDLSNQ 223
K+ DF + Q
Sbjct: 168 KLCDFGSAKQ 177
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 80/178 (44%), Gaps = 21/178 (11%)
Query: 75 IGEGSYGRVYYGILKSGHAAAIKKLD---ASKQPDEEFLAQVSMVSRLKH--ENFVQLLG 129
IG G +V+ + + AIK ++ A Q + + +++ +++L+ + ++L
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 130 YCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHE 189
Y + + E N L+ L +K + W+++ LE +H
Sbjct: 124 YEITDQYIYMVME-CGNIDLNSWLKKKKSID--------PWERKSY----WKNMLEAVHT 170
Query: 190 KADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQA-PDMAARLHSTRVLGTFGYHAPE 246
I+H D+K +N LI D + K+ DF ++NQ PD + + ++V GT Y PE
Sbjct: 171 IHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQV-GTVNYMPPE 226
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 93/225 (41%), Gaps = 25/225 (11%)
Query: 29 GTDGAYHASEAAPKGAQAVKVQPIEVPAISVD--ELKEITENFGTNALIGEGSYGRVYYG 86
GT+ Y S ++ + A + VP +D +++ F + +G G+ VY
Sbjct: 14 GTENLYFQSMSSVTASAAPGTASL-VPDYWIDGSNRDALSDFFEVESELGRGATSIVYRC 72
Query: 87 ILKSGHAA-AIKKLDASKQPDEEFL-AQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFA 144
K A+K L K D++ + ++ ++ RL H N ++L T L E
Sbjct: 73 KQKGTQKPYALKVL--KKTVDKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELV 130
Query: 145 SNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSN 204
+ G L D R KG S + + + YLHE I+HRD+K N
Sbjct: 131 TGGELFD----RIVEKG-----YYSERDAADAVKQILEAVAYLHENG---IVHRDLKPEN 178
Query: 205 VLIFD---DDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
+L D KIADF LS + ++ V GT GY APE
Sbjct: 179 LLYATPAPDAPLKIADFGLSKI---VEHQVLMKTVCGTPGYCAPE 220
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 79/190 (41%), Gaps = 42/190 (22%)
Query: 52 IEVPAISVDELKEITENFGTNALIGEGSYGRVYYGIL-KSGHAAAIKKLDASKQPDEEFL 110
+ P D +E++ + +IG GS+G VY L SG AIKK+ K+
Sbjct: 20 VATPGQGPDRPQEVS--YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-- 75
Query: 111 AQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILH---------------G 155
++ ++ +L H N V+L Y F S+G D ++
Sbjct: 76 -ELQIMRKLDHCNIVRL------------RYFFYSSGEKKDEVYLNLVLDYVPETVYRVA 122
Query: 156 RKGVKGAQPGPVLSWQQRVKIAV-GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDD-VA 213
R + Q PV+ VK+ + + L Y+H I HRDIK N+L+ D V
Sbjct: 123 RHYSRAKQTLPVIY----VKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVL 175
Query: 214 KIADFDLSNQ 223
K+ DF + Q
Sbjct: 176 KLCDFGSAKQ 185
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 86/194 (44%), Gaps = 38/194 (19%)
Query: 68 NFGTNALIGEGSYGRVYYGILK--SGHAAAIKKLDAS----KQPDEEFLAQVSMVSRLKH 121
+F + +IG G +G VY G K +G A+K LD KQ + L + M+S +
Sbjct: 190 DFSVHRIIGRGGFGEVY-GCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 122 EN--FVQLLGYCVDGTSRV-LAYEFASNGSLHDIL--HGRKGVKGAQPGPVLSWQQRVKI 176
+ F+ + Y ++ + + G LH L HG V S
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHG-----------VFSEADMRFY 297
Query: 177 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADF----DLSNQAPDMAARLH 232
A GLE++H + +++RD+K +N+L+ + +I+D D S + P H
Sbjct: 298 AAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP------H 348
Query: 233 STRVLGTFGYHAPE 246
++ +GT GY APE
Sbjct: 349 AS--VGTHGYMAPE 360
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 86/194 (44%), Gaps = 38/194 (19%)
Query: 68 NFGTNALIGEGSYGRVYYGILK--SGHAAAIKKLDAS----KQPDEEFLAQVSMVSRLKH 121
+F + +IG G +G VY G K +G A+K LD KQ + L + M+S +
Sbjct: 190 DFSVHRIIGRGGFGEVY-GCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 122 EN--FVQLLGYCVDGTSRV-LAYEFASNGSLHDIL--HGRKGVKGAQPGPVLSWQQRVKI 176
+ F+ + Y ++ + + G LH L HG V S
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHG-----------VFSEADMRFY 297
Query: 177 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADF----DLSNQAPDMAARLH 232
A GLE++H + +++RD+K +N+L+ + +I+D D S + P H
Sbjct: 298 AAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP------H 348
Query: 233 STRVLGTFGYHAPE 246
++ +GT GY APE
Sbjct: 349 AS--VGTHGYMAPE 360
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 81/185 (43%), Gaps = 20/185 (10%)
Query: 68 NFGTNALIGEGSYGRVYYGILKSG---HAAAIKKLDASKQPD--EEFLAQVSMVSRLKHE 122
+F ++G+GS+G+V K +A I K D Q D E + + +++
Sbjct: 21 DFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKP 80
Query: 123 NFVQLLGYCVDGTSRV-LAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAA 181
F+ L C R+ E+ + G L + H ++ + +P V A A
Sbjct: 81 PFLTQLHSCFQTMDRLYFVMEYVNGGDL--MYHIQQVGRFKEPHAVF-------YAAEIA 131
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFG 241
GL +L K II+RD+K NV++ + KIADF + + ++ + + GT
Sbjct: 132 IGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKE--NIWDGVTTKXFCGTPD 186
Query: 242 YHAPE 246
Y APE
Sbjct: 187 YIAPE 191
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 76/177 (42%), Gaps = 22/177 (12%)
Query: 75 IGEGSYGRVYY-GILKSGHAAAIKKLDASK----QPDEEFLAQVSMVSRLKHENFVQLLG 129
IG GS+GRV +++G+ A+K LD K + E L + ++ + V+L
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 130 YCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHE 189
D ++ + E+ G + H R+ + ++P A EYLH
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPHARF-------YAAQIVLTFEYLH- 158
Query: 190 KADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
+I+RD+K N+LI K+ADF + + + + + GT Y APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIKVADFGFAKR-----VKGRTWXLCGTPEYLAPE 208
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 80/178 (44%), Gaps = 21/178 (11%)
Query: 75 IGEGSYGRVYYGILKSGHAAAIKKLD---ASKQPDEEFLAQVSMVSRLKH--ENFVQLLG 129
IG G +V+ + + AIK ++ A Q + + +++ +++L+ + ++L
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 95
Query: 130 YCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHE 189
Y + + E N L+ L +K + W+++ LE +H
Sbjct: 96 YEITDQYIYMVME-CGNIDLNSWLKKKKSID--------PWERKSY----WKNMLEAVHT 142
Query: 190 KADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQA-PDMAARLHSTRVLGTFGYHAPE 246
I+H D+K +N LI D + K+ DF ++NQ PD + + ++V GT Y PE
Sbjct: 143 IHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQV-GTVNYMPPE 198
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 86/194 (44%), Gaps = 38/194 (19%)
Query: 68 NFGTNALIGEGSYGRVYYGILK--SGHAAAIKKLDAS----KQPDEEFLAQVSMVSRLKH 121
+F + +IG G +G VY G K +G A+K LD KQ + L + M+S +
Sbjct: 190 DFSVHRIIGRGGFGEVY-GCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 122 EN--FVQLLGYCVDGTSRV-LAYEFASNGSLHDIL--HGRKGVKGAQPGPVLSWQQRVKI 176
+ F+ + Y ++ + + G LH L HG V S
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHG-----------VFSEADMRFY 297
Query: 177 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADF----DLSNQAPDMAARLH 232
A GLE++H + +++RD+K +N+L+ + +I+D D S + P H
Sbjct: 298 AAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP------H 348
Query: 233 STRVLGTFGYHAPE 246
++ +GT GY APE
Sbjct: 349 AS--VGTHGYMAPE 360
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 78/179 (43%), Gaps = 25/179 (13%)
Query: 75 IGEGSYGRVYYGILK-SGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVD 133
+G GS+G V+ K +G A+KK+ EE +A + S V L G +
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELVACAGLSS----PRIVPLYGAVRE 137
Query: 134 GTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAA-KGLEYLHEKAD 192
G + E GSL ++ G P + R +G A +GLEYLH +
Sbjct: 138 GPWVNIFMELLEGGSLGQLIKQ----MGCLP------EDRALYYLGQALEGLEYLHTR-- 185
Query: 193 PHIIHRDIKSSNVLIFDD-DVAKIADFD--LSNQAPDMAAR--LHSTRVLGTFGYHAPE 246
I+H D+K+ NVL+ D A + DF L Q PD + L + GT + APE
Sbjct: 186 -RILHGDVKADNVLLSSDGSRAALCDFGHALCLQ-PDGLGKSLLTGDYIPGTETHMAPE 242
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 79/190 (41%), Gaps = 42/190 (22%)
Query: 52 IEVPAISVDELKEITENFGTNALIGEGSYGRVYYGIL-KSGHAAAIKKLDASKQPDEEFL 110
+ P D +E++ + +IG GS+G VY L SG AIKK+ K+
Sbjct: 19 VATPGQGPDRPQEVS--YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-- 74
Query: 111 AQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILH---------------G 155
++ ++ +L H N V+L Y F S+G D ++
Sbjct: 75 -ELQIMRKLDHCNIVRL------------RYFFYSSGEKKDEVYLNLVLDYVPETVYRVA 121
Query: 156 RKGVKGAQPGPVLSWQQRVKIAV-GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDD-VA 213
R + Q PV+ VK+ + + L Y+H I HRDIK N+L+ D V
Sbjct: 122 RHYSRAKQTLPVIY----VKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVL 174
Query: 214 KIADFDLSNQ 223
K+ DF + Q
Sbjct: 175 KLCDFGSAKQ 184
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 79/190 (41%), Gaps = 42/190 (22%)
Query: 52 IEVPAISVDELKEITENFGTNALIGEGSYGRVYYGIL-KSGHAAAIKKLDASKQPDEEFL 110
+ P D +E++ + +IG GS+G VY L SG AIKK+ K+
Sbjct: 7 VATPGQGPDRPQEVS--YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-- 62
Query: 111 AQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILH---------------G 155
++ ++ +L H N V+L Y F S+G D ++
Sbjct: 63 -ELQIMRKLDHCNIVRL------------RYFFYSSGEKKDEVYLNLVLDYVPETVYRVA 109
Query: 156 RKGVKGAQPGPVLSWQQRVKIAV-GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDD-VA 213
R + Q PV+ VK+ + + L Y+H I HRDIK N+L+ D V
Sbjct: 110 RHYSRAKQTLPVIY----VKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVL 162
Query: 214 KIADFDLSNQ 223
K+ DF + Q
Sbjct: 163 KLCDFGSAKQ 172
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 79/190 (41%), Gaps = 42/190 (22%)
Query: 52 IEVPAISVDELKEITENFGTNALIGEGSYGRVYYGIL-KSGHAAAIKKLDASKQPDEEFL 110
+ P D +E++ + +IG GS+G VY L SG AIKK+ K+
Sbjct: 26 VATPGQGPDRPQEVS--YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-- 81
Query: 111 AQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILH---------------G 155
++ ++ +L H N V+L Y F S+G D ++
Sbjct: 82 -ELQIMRKLDHCNIVRL------------RYFFYSSGEKKDEVYLNLVLDYVPETVYRVA 128
Query: 156 RKGVKGAQPGPVLSWQQRVKIAV-GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDD-VA 213
R + Q PV+ VK+ + + L Y+H I HRDIK N+L+ D V
Sbjct: 129 RHYSRAKQTLPVIY----VKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVL 181
Query: 214 KIADFDLSNQ 223
K+ DF + Q
Sbjct: 182 KLCDFGSAKQ 191
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 86/194 (44%), Gaps = 38/194 (19%)
Query: 68 NFGTNALIGEGSYGRVYYGILK--SGHAAAIKKLDAS----KQPDEEFLAQVSMVSRLKH 121
+F + +IG G +G VY G K +G A+K LD KQ + L + M+S +
Sbjct: 189 DFSVHRIIGRGGFGEVY-GCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 247
Query: 122 EN--FVQLLGYCVDGTSRV-LAYEFASNGSLHDIL--HGRKGVKGAQPGPVLSWQQRVKI 176
+ F+ + Y ++ + + G LH L HG V S
Sbjct: 248 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHG-----------VFSEADMRFY 296
Query: 177 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADF----DLSNQAPDMAARLH 232
A GLE++H + +++RD+K +N+L+ + +I+D D S + P H
Sbjct: 297 AAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP------H 347
Query: 233 STRVLGTFGYHAPE 246
++ +GT GY APE
Sbjct: 348 AS--VGTHGYMAPE 359
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 79/190 (41%), Gaps = 42/190 (22%)
Query: 52 IEVPAISVDELKEITENFGTNALIGEGSYGRVYYGIL-KSGHAAAIKKLDASKQPDEEFL 110
+ P D +E++ + +IG GS+G VY L SG AIKK+ K+
Sbjct: 7 VATPGQGPDRPQEVS--YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-- 62
Query: 111 AQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILH---------------G 155
++ ++ +L H N V+L Y F S+G D ++
Sbjct: 63 -ELQIMRKLDHCNIVRL------------RYFFYSSGEKKDEVYLNLVLDYVPETVYRVA 109
Query: 156 RKGVKGAQPGPVLSWQQRVKIAV-GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDD-VA 213
R + Q PV+ VK+ + + L Y+H I HRDIK N+L+ D V
Sbjct: 110 RHYSRAKQTLPVIY----VKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVL 162
Query: 214 KIADFDLSNQ 223
K+ DF + Q
Sbjct: 163 KLCDFGSAKQ 172
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 79/190 (41%), Gaps = 42/190 (22%)
Query: 52 IEVPAISVDELKEITENFGTNALIGEGSYGRVYYGIL-KSGHAAAIKKLDASKQPDEEFL 110
+ P D +E++ + +IG GS+G VY L SG AIKK+ K+
Sbjct: 15 VATPGQGPDRPQEVS--YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-- 70
Query: 111 AQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILH---------------G 155
++ ++ +L H N V+L Y F S+G D ++
Sbjct: 71 -ELQIMRKLDHCNIVRL------------RYFFYSSGEKKDEVYLNLVLDYVPETVYRVA 117
Query: 156 RKGVKGAQPGPVLSWQQRVKIAV-GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDD-VA 213
R + Q PV+ VK+ + + L Y+H I HRDIK N+L+ D V
Sbjct: 118 RHYSRAKQTLPVIY----VKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVL 170
Query: 214 KIADFDLSNQ 223
K+ DF + Q
Sbjct: 171 KLCDFGSAKQ 180
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 79/190 (41%), Gaps = 42/190 (22%)
Query: 52 IEVPAISVDELKEITENFGTNALIGEGSYGRVYYGIL-KSGHAAAIKKLDASKQPDEEFL 110
+ P D +E++ + +IG GS+G VY L SG AIKK+ K+
Sbjct: 19 VATPGQGPDRPQEVS--YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-- 74
Query: 111 AQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILH---------------G 155
++ ++ +L H N V+L Y F S+G D ++
Sbjct: 75 -ELQIMRKLDHCNIVRL------------RYFFYSSGEKKDEVYLNLVLDYVPETVYRVA 121
Query: 156 RKGVKGAQPGPVLSWQQRVKIAV-GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDD-VA 213
R + Q PV+ VK+ + + L Y+H I HRDIK N+L+ D V
Sbjct: 122 RHYSRAKQTLPVIY----VKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVL 174
Query: 214 KIADFDLSNQ 223
K+ DF + Q
Sbjct: 175 KLCDFGSAKQ 184
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 79/190 (41%), Gaps = 42/190 (22%)
Query: 52 IEVPAISVDELKEITENFGTNALIGEGSYGRVYYGIL-KSGHAAAIKKLDASKQPDEEFL 110
+ P D +E++ + +IG GS+G VY L SG AIKK+ K+
Sbjct: 8 VATPGQGPDRPQEVS--YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-- 63
Query: 111 AQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILH---------------G 155
++ ++ +L H N V+L Y F S+G D ++
Sbjct: 64 -ELQIMRKLDHCNIVRL------------RYFFYSSGEKKDEVYLNLVLDYVPETVYRVA 110
Query: 156 RKGVKGAQPGPVLSWQQRVKIAV-GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDD-VA 213
R + Q PV+ VK+ + + L Y+H I HRDIK N+L+ D V
Sbjct: 111 RHYSRAKQTLPVIY----VKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVL 163
Query: 214 KIADFDLSNQ 223
K+ DF + Q
Sbjct: 164 KLCDFGSAKQ 173
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 79/190 (41%), Gaps = 42/190 (22%)
Query: 52 IEVPAISVDELKEITENFGTNALIGEGSYGRVYYGIL-KSGHAAAIKKLDASKQPDEEFL 110
+ P D +E++ + +IG GS+G VY L SG AIKK+ K+
Sbjct: 7 VATPGQGPDRPQEVS--YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-- 62
Query: 111 AQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILH---------------G 155
++ ++ +L H N V+L Y F S+G D ++
Sbjct: 63 -ELQIMRKLDHCNIVRL------------RYFFYSSGEKKDEVYLNLVLDYVPETVYRVA 109
Query: 156 RKGVKGAQPGPVLSWQQRVKIAV-GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDD-VA 213
R + Q PV+ VK+ + + L Y+H I HRDIK N+L+ D V
Sbjct: 110 RHYSRAKQTLPVIY----VKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVL 162
Query: 214 KIADFDLSNQ 223
K+ DF + Q
Sbjct: 163 KLCDFGSAKQ 172
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 79/190 (41%), Gaps = 21/190 (11%)
Query: 63 KEITENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKL--DASKQPDEEFLAQVSMVSRL 119
++I + F +G G++ V K +G A+K + A K + +++++ ++
Sbjct: 18 EDIKKIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKI 77
Query: 120 KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVG 179
KHEN V L L + S G L D + KG + L Q
Sbjct: 78 KHENIVALEDIYESPNHLYLVMQLVSGGELFDRI-VEKGFYTEKDASTLIRQ-------- 128
Query: 180 AAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAK---IADFDLSNQAPDMAARLHSTRV 236
+ YLH I+HRD+K N+L + D I+DF LS + + ST
Sbjct: 129 VLDAVYYLHRMG---IVHRDLKPENLLYYSQDEESKIMISDFGLSKM--EGKGDVMST-A 182
Query: 237 LGTFGYHAPE 246
GT GY APE
Sbjct: 183 CGTPGYVAPE 192
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 84/202 (41%), Gaps = 25/202 (12%)
Query: 55 PAISVDELKEITENFGTNALIGEGSYGRV---YYGILKSGHAAAIKKLDASKQPD--EEF 109
P + ++ ++ + + IGEG+YG V Y + K AIKK+ + +
Sbjct: 13 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKV--RVAIKKISPFEHQTYCQRT 70
Query: 110 LAQVSMVSRLKHENFV----QLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPG 165
L ++ ++ +HEN + + ++ V + L+ +L +
Sbjct: 71 LREIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-------- 122
Query: 166 PVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQA- 224
LS +GL+Y+H +++HRD+K SN+L+ KI DF L+ A
Sbjct: 123 --LSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 177
Query: 225 PDMAARLHSTRVLGTFGYHAPE 246
PD T + T Y APE
Sbjct: 178 PDHDHTGFLTEYVATRWYRAPE 199
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 80/178 (44%), Gaps = 21/178 (11%)
Query: 75 IGEGSYGRVYYGILKSGHAAAIKKLD---ASKQPDEEFLAQVSMVSRLKH--ENFVQLLG 129
IG G +V+ + + AIK ++ A Q + + +++ +++L+ + ++L
Sbjct: 17 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 76
Query: 130 YCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHE 189
Y + + E N L+ L +K + W+++ LE +H
Sbjct: 77 YEITDQYIYMVME-CGNIDLNSWLKKKKSID--------PWERKSY----WKNMLEAVHT 123
Query: 190 KADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQA-PDMAARLHSTRVLGTFGYHAPE 246
I+H D+K +N LI D + K+ DF ++NQ PD + + ++V GT Y PE
Sbjct: 124 IHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQV-GTVNYMPPE 179
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 80/178 (44%), Gaps = 21/178 (11%)
Query: 75 IGEGSYGRVYYGILKSGHAAAIKKLD---ASKQPDEEFLAQVSMVSRLKH--ENFVQLLG 129
IG G +V+ + + AIK ++ A Q + + +++ +++L+ + ++L
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 130 YCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHE 189
Y + + E N L+ L +K + W+++ LE +H
Sbjct: 124 YEITDQYIYMVME-CGNIDLNSWLKKKKSID--------PWERKSY----WKNMLEAVHT 170
Query: 190 KADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQA-PDMAARLHSTRVLGTFGYHAPE 246
I+H D+K +N LI D + K+ DF ++NQ PD + + ++V GT Y PE
Sbjct: 171 IHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQV-GTVNYMPPE 226
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 77/177 (43%), Gaps = 22/177 (12%)
Query: 75 IGEGSYGRVYY-GILKSGHAAAIKKLDASK----QPDEEFLAQVSMVSRLKHENFVQLLG 129
+G GS+GRV +++G+ A+K LD K + E L + ++ + V+L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 130 YCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHE 189
D ++ + E+A G + H R+ + ++P A EYLH
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFS--HLRRIGRFSEPHARF-------YAAQIVLTFEYLH- 158
Query: 190 KADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
+I+RD+K N++I K+ DF L+ + + + + GT Y APE
Sbjct: 159 --SLDLIYRDLKPENLMIDQQGYIKVTDFGLAKR-----VKGRTWXLCGTPEYLAPE 208
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 87/206 (42%), Gaps = 31/206 (15%)
Query: 48 KVQPIEVPAISVDELKEITENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQPD 106
K++P++ E +E +G GS+G V+ K +G A+KK+
Sbjct: 59 KLKPVDY------EYREEVHWMTHQPRLGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRV 112
Query: 107 EEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGP 166
EE +A + S V L G +G + E GSL ++ G P
Sbjct: 113 EELVACAGLSS----PRIVPLYGAVREGPWVNIFMELLEGGSLGQLIK----QMGCLP-- 162
Query: 167 VLSWQQRVKIAVGAA-KGLEYLHEKADPHIIHRDIKSSNVLIFDD-DVAKIADFD--LSN 222
+ R +G A +GLEYLH + I+H D+K+ NVL+ D A + DF L
Sbjct: 163 ----EDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCL 215
Query: 223 QAPDMAAR--LHSTRVLGTFGYHAPE 246
Q PD + L + GT + APE
Sbjct: 216 Q-PDGLGKSLLTGDYIPGTETHMAPE 240
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 76/177 (42%), Gaps = 22/177 (12%)
Query: 75 IGEGSYGRVYY-GILKSGHAAAIKKLDASK----QPDEEFLAQVSMVSRLKHENFVQLLG 129
IG GS+GRV +++G+ A+K LD K + E L + ++ + V+L
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 130 YCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHE 189
D ++ + E+ G + H R+ + ++P A EYLH
Sbjct: 109 SFKDNSNLYMVMEYMPGGDMFS--HLRRIGRFSEPHARF-------YAAQIVLTFEYLH- 158
Query: 190 KADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
+I+RD+K N+LI K+ADF + + + + + GT Y APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIKVADFGFAKR-----VKGRTWXLCGTPEYLAPE 208
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 76/177 (42%), Gaps = 22/177 (12%)
Query: 75 IGEGSYGRVYY-GILKSGHAAAIKKLDASK----QPDEEFLAQVSMVSRLKHENFVQLLG 129
IG GS+GRV +++G+ A+K LD K + E L + ++ + V+L
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 130 YCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHE 189
D ++ + E+ G + H R+ + ++P A EYLH
Sbjct: 109 SFKDNSNLYMVMEYMPGGDMFS--HLRRIGRFSEPHARF-------YAAQIVLTFEYLH- 158
Query: 190 KADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
+I+RD+K N+LI K+ADF + + + + + GT Y APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIKVADFGFAKR-----VKGRTWXLCGTPEYLAPE 208
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 80/192 (41%), Gaps = 35/192 (18%)
Query: 75 IGEGSYGRVYYGILKSGHAA---AIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYC 131
+G G+YG VY K G A+K+++ + +++++ LKH N + L
Sbjct: 29 VGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI-SMSACREIALLRELKHPNVISLQKVF 87
Query: 132 VDGTSR--VLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAK------- 182
+ R L +++A + H I R +P V++ G K
Sbjct: 88 LSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKP---------VQLPRGMVKSLLYQIL 138
Query: 183 -GLEYLHEKADPHIIHRDIKSSNVLIF----DDDVAKIADF---DLSNQAPDMAARLHST 234
G+ YLH ++HRD+K +N+L+ + KIAD L N A L
Sbjct: 139 DGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDP- 194
Query: 235 RVLGTFGYHAPE 246
V+ TF Y APE
Sbjct: 195 -VVVTFWYRAPE 205
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 64/144 (44%), Gaps = 19/144 (13%)
Query: 107 EEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGP 166
E+ +VS++ ++H N + L + T +L E + G L D L ++
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKES-------- 110
Query: 167 VLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVA----KIADFDLSN 222
L+ ++ + G+ YLH I H D+K N+++ D +V KI DF L++
Sbjct: 111 -LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166
Query: 223 QAPDMAARLHSTRVLGTFGYHAPE 246
+ D + + GT + APE
Sbjct: 167 KI-DFGNEFKN--IFGTPEFVAPE 187
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 81/191 (42%), Gaps = 27/191 (14%)
Query: 67 ENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFL-----------AQVSM 115
E F ++G+G YG+V+ ++ A K+ A K + + A+ ++
Sbjct: 17 ECFELLRVLGKGGYGKVFQ--VRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNI 74
Query: 116 VSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVK 175
+ +KH V L+ G L E+ S G L L R+G+ + +
Sbjct: 75 LEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLE-REGI--FMEDTACFYLAEIS 131
Query: 176 IAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTR 235
+A+G +LH+K II+RD+K N+++ K+ DF L ++ H+
Sbjct: 132 MALG------HLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHT-- 180
Query: 236 VLGTFGYHAPE 246
GT Y APE
Sbjct: 181 FCGTIEYMAPE 191
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 65/139 (46%), Gaps = 19/139 (13%)
Query: 111 AQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSW 170
++ ++ +L H +++ + D + E G L D + G K +K A L +
Sbjct: 189 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCK--LYF 245
Query: 171 QQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIF---DDDVAKIADFDLSNQAPDM 227
Q + +AV +YLHE IIHRD+K NVL+ +D + KI DF S +
Sbjct: 246 YQML-LAV------QYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 295
Query: 228 AARLHSTRVLGTFGYHAPE 246
+ L T + GT Y APE
Sbjct: 296 S--LMRT-LCGTPTYLAPE 311
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 40.4 bits (93), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 80/178 (44%), Gaps = 20/178 (11%)
Query: 74 LIGEGSYGRVYY-GILKSGHAAAIKKLDASKQPD-EEFLAQVSMVSRLKHENFVQLLGYC 131
++G G +G+V+ +G A K + D EE ++S++++L H N +QL
Sbjct: 96 ILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAF 155
Query: 132 VDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKA 191
VL E+ G L D + + + +L +Q +G+ ++H+
Sbjct: 156 ESKNDIVLVMEYVDGGELFDRIID-ESYNLTELDTILFMKQ-------ICEGIRHMHQM- 206
Query: 192 DPHIIHRDIKSSNVLIFDDDVA--KIADFDLSNQ-APDMAARLHSTRVLGTFGYHAPE 246
+I+H D+K N+L + D KI DF L+ + P +++ GT + APE
Sbjct: 207 --YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVN----FGTPEFLAPE 258
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 65/139 (46%), Gaps = 19/139 (13%)
Query: 111 AQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSW 170
++ ++ +L H +++ + D + E G L D + G K +K A L +
Sbjct: 203 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCK--LYF 259
Query: 171 QQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIF---DDDVAKIADFDLSNQAPDM 227
Q + +AV +YLHE IIHRD+K NVL+ +D + KI DF S +
Sbjct: 260 YQML-LAV------QYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 309
Query: 228 AARLHSTRVLGTFGYHAPE 246
+ L T + GT Y APE
Sbjct: 310 S--LMRT-LCGTPTYLAPE 325
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 78/189 (41%), Gaps = 19/189 (10%)
Query: 63 KEITENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQPDEEFLAQVSMVSRLKH 121
K +F L+G+G++G+V K +G A+K L ++ +A SR+
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 122 EN---FVQLLGYCVDGTSRV-LAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIA 177
F+ L Y R+ E+A+ G L L + V + ++
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER---------VFTEERARFYG 111
Query: 178 VGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVL 237
LEYLH + +++RDIK N+++ D KI DF L + A + +
Sbjct: 112 AEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT--FC 166
Query: 238 GTFGYHAPE 246
GT Y APE
Sbjct: 167 GTPEYLAPE 175
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 79/178 (44%), Gaps = 21/178 (11%)
Query: 75 IGEGSYGRVYYGILKSGHAAAIKKLD---ASKQPDEEFLAQVSMVSRLKH--ENFVQLLG 129
IG G +V+ + + AIK ++ A Q + + +++ +++L+ + ++L
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 95
Query: 130 YCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHE 189
Y + + E N L+ L +K + W+++ LE +H
Sbjct: 96 YEITDQYIYMVME-CGNIDLNSWLKKKKSID--------PWERKSY----WKNMLEAVHT 142
Query: 190 KADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQA-PDMAARLHSTRVLGTFGYHAPE 246
I+H D+K +N LI D + K+ DF ++NQ PD + ++V GT Y PE
Sbjct: 143 IHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDXXXVVKDSQV-GTVNYMPPE 198
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 78/189 (41%), Gaps = 19/189 (10%)
Query: 63 KEITENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQPDEEFLAQVSMVSRLKH 121
K +F L+G+G++G+V K +G A+K L ++ +A SR+
Sbjct: 4 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 63
Query: 122 EN---FVQLLGYCVDGTSRV-LAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIA 177
F+ L Y R+ E+A+ G L L + V + ++
Sbjct: 64 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER---------VFTEERARFYG 114
Query: 178 VGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVL 237
LEYLH + +++RDIK N+++ D KI DF L + A + +
Sbjct: 115 AEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT--FC 169
Query: 238 GTFGYHAPE 246
GT Y APE
Sbjct: 170 GTPEYLAPE 178
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 78/189 (41%), Gaps = 19/189 (10%)
Query: 63 KEITENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQPDEEFLAQVSMVSRLKH 121
K +F L+G+G++G+V K +G A+K L ++ +A SR+
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 122 EN---FVQLLGYCVDGTSRV-LAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIA 177
F+ L Y R+ E+A+ G L L + V + ++
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER---------VFTEERARFYG 111
Query: 178 VGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVL 237
LEYLH + +++RDIK N+++ D KI DF L + A + +
Sbjct: 112 AEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT--FC 166
Query: 238 GTFGYHAPE 246
GT Y APE
Sbjct: 167 GTPEYLAPE 175
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 84/195 (43%), Gaps = 31/195 (15%)
Query: 67 ENFGTNALIGEGSYGRVYYGILKS-GHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFV 125
+ F + G+G++G V G KS G + AIKK+ + L + ++ L H N V
Sbjct: 23 DRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIV 82
Query: 126 QLLGY--CVDGTSRVLAYEFASNGSLHDILHG------RKGVKGAQPGPVLSWQQRVKIA 177
QL Y + R Y + D LH R+ V P P+L +K+
Sbjct: 83 QLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVA---PPPIL-----IKVF 134
Query: 178 V-GAAKGLEYLHEKADPHIIHRDIKSSNVLIFD-DDVAKIADF----DLSNQAPDMAARL 231
+ + + LH + ++ HRDIK NVL+ + D K+ DF LS P++A
Sbjct: 135 LFQLIRSIGCLHLPSV-NVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVA--- 190
Query: 232 HSTRVLGTFGYHAPE 246
+ + Y APE
Sbjct: 191 ----YICSRYYRAPE 201
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 78/190 (41%), Gaps = 42/190 (22%)
Query: 52 IEVPAISVDELKEITENFGTNALIGEGSYGRVYYGIL-KSGHAAAIKKLDASKQPDEEFL 110
+ P D +E++ + +IG GS+G VY L SG AIKK+ K
Sbjct: 7 VATPGQGPDRPQEVS--YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR-- 62
Query: 111 AQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILH---------------G 155
++ ++ +L H N V+L Y F S+G D ++
Sbjct: 63 -ELQIMRKLDHCNIVRL------------RYFFYSSGEKKDEVYLNLVLDYVPETVYRVA 109
Query: 156 RKGVKGAQPGPVLSWQQRVKIAV-GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDD-VA 213
R + Q PV+ VK+ + + L Y+H I HRDIK N+L+ D V
Sbjct: 110 RHYSRAKQTLPVIY----VKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVL 162
Query: 214 KIADFDLSNQ 223
K+ DF + Q
Sbjct: 163 KLCDFGSAKQ 172
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 80/191 (41%), Gaps = 27/191 (14%)
Query: 67 ENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFL-----------AQVSM 115
E F ++G+G YG+V+ ++ A K+ A K + + A+ ++
Sbjct: 17 ECFELLRVLGKGGYGKVFQ--VRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNI 74
Query: 116 VSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVK 175
+ +KH V L+ G L E+ S G L L R+G+ + +
Sbjct: 75 LEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLE-REGI--FMEDTACFYLAEIS 131
Query: 176 IAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTR 235
+A+G +LH+K II+RD+K N+++ K+ DF L ++ H
Sbjct: 132 MALG------HLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHX-- 180
Query: 236 VLGTFGYHAPE 246
GT Y APE
Sbjct: 181 FCGTIEYMAPE 191
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 78/190 (41%), Gaps = 42/190 (22%)
Query: 52 IEVPAISVDELKEITENFGTNALIGEGSYGRVYYGIL-KSGHAAAIKKLDASKQPDEEFL 110
+ P D +E++ + +IG GS+G VY L SG AIKK+ K
Sbjct: 7 VATPGQGPDRPQEVS--YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR-- 62
Query: 111 AQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILH---------------G 155
++ ++ +L H N V+L Y F S+G D ++
Sbjct: 63 -ELQIMRKLDHCNIVRL------------RYFFYSSGEKKDEVYLNLVLDYVPATVYRVA 109
Query: 156 RKGVKGAQPGPVLSWQQRVKIAV-GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDD-VA 213
R + Q PV+ VK+ + + L Y+H I HRDIK N+L+ D V
Sbjct: 110 RHYSRAKQTLPVIY----VKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVL 162
Query: 214 KIADFDLSNQ 223
K+ DF + Q
Sbjct: 163 KLCDFGSAKQ 172
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 78/190 (41%), Gaps = 42/190 (22%)
Query: 52 IEVPAISVDELKEITENFGTNALIGEGSYGRVYYGIL-KSGHAAAIKKLDASKQPDEEFL 110
+ P D +E++ + +IG GS+G VY L SG AIKK+ K
Sbjct: 7 VATPGQGPDRPQEVS--YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR-- 62
Query: 111 AQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILH---------------G 155
++ ++ +L H N V+L Y F S+G D ++
Sbjct: 63 -ELQIMRKLDHCNIVRL------------RYFFYSSGEKKDEVYLNLVLDYVPETVYRVA 109
Query: 156 RKGVKGAQPGPVLSWQQRVKIAV-GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDD-VA 213
R + Q PV+ VK+ + + L Y+H I HRDIK N+L+ D V
Sbjct: 110 RHYSRAKQTLPVIY----VKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVL 162
Query: 214 KIADFDLSNQ 223
K+ DF + Q
Sbjct: 163 KLCDFGSAKQ 172
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 85/203 (41%), Gaps = 26/203 (12%)
Query: 49 VQPIEVPAISVDELKEITENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASK---- 103
++ E P+ + +L + F +G GS+GRV K SG+ A+K LD K
Sbjct: 27 LKKWETPSQNTAQL----DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKL 82
Query: 104 QPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQ 163
+ E L + ++ + V+L D ++ + E+ + G + H R+ + A+
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFAE 140
Query: 164 PGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQ 223
P A EYLH +I+RD+K N+LI ++ DF + +
Sbjct: 141 PHARF-------YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR 190
Query: 224 APDMAARLHSTRVLGTFGYHAPE 246
+ + + GT Y APE
Sbjct: 191 -----VKGRTWXLCGTPEYLAPE 208
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 77/177 (43%), Gaps = 22/177 (12%)
Query: 75 IGEGSYGRVYY-GILKSGHAAAIKKLDASK----QPDEEFLAQVSMVSRLKHENFVQLLG 129
+G GS+GRV +++G+ A+K LD K + E L + ++ + V+L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 130 YCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHE 189
D ++ + E+A G + H R+ + ++P A EYLH
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFS--HLRRIGRFSEPHARF-------YAAQIVLTFEYLH- 158
Query: 190 KADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
+I+RD+K N++I ++ DF L+ + + + + GT Y APE
Sbjct: 159 --SLDLIYRDLKPENLMIDQQGYIQVTDFGLAKR-----VKGRTWXLCGTPEYLAPE 208
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 76/177 (42%), Gaps = 22/177 (12%)
Query: 75 IGEGSYGRVYY-GILKSGHAAAIKKLDASK----QPDEEFLAQVSMVSRLKHENFVQLLG 129
+G GS+GRV +++G+ A+K LD K + E L + ++ + V+L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 130 YCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHE 189
D ++ + E+A G + H R+ + ++P A EYLH
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFS--HLRRIGRFSEPHARF-------YAAQIVLTFEYLH- 158
Query: 190 KADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
+I+RD+K N++I K+ DF + + + + + GT Y APE
Sbjct: 159 --SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKR-----VKGRTWXLCGTPEYLAPE 208
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 90/206 (43%), Gaps = 38/206 (18%)
Query: 51 PIEVPAISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHA---AAIKKLDASKQPDE 107
P+++P + + E+ ++ IG G++G +++ A A+K ++ ++ DE
Sbjct: 9 PMDLPIMHDSDRYELVKD------IGAGNFGVA--RLMRDKQANELVAVKYIERGEKIDE 60
Query: 108 EFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDIL--HGRKGVKGAQPG 165
++ L+H N V+ + T + E+AS G L + + GR A+
Sbjct: 61 NVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEAR-- 118
Query: 166 PVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVA---KIADFDLSN 222
+QQ + G+ Y H + HRD+K N L+ D A KIADF S
Sbjct: 119 --FFFQQLI-------SGVSYAHAM---QVAHRDLKLENTLL-DGSPAPRLKIADFGYSK 165
Query: 223 QAPDMAARLHS--TRVLGTFGYHAPE 246
A+ LHS +GT Y APE
Sbjct: 166 -----ASVLHSQPKSAVGTPAYIAPE 186
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 11/107 (10%)
Query: 143 FASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKS 202
F + SL D+ + G P+ + + + + A+G+E+L + IHRD+ +
Sbjct: 173 FQEDKSLSDV-EEEEDSDGFYKEPI-TMEDLISYSFQVARGMEFLSSR---KCIHRDLAA 227
Query: 203 SNVLIFDDDVAKIADFDLSN---QAPDMAARLHSTRVLGTFGYHAPE 246
N+L+ +++V KI DF L+ + PD R TR+ + APE
Sbjct: 228 RNILLSENNVVKICDFGLARDIYKNPDY-VRKGDTRL--PLKWMAPE 271
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 75/177 (42%), Gaps = 22/177 (12%)
Query: 75 IGEGSYGRVYYGILK-SGHAAAIKKLDASK----QPDEEFLAQVSMVSRLKHENFVQLLG 129
+G GS+GRV K +G+ A+K LD K + E L + + + V+L
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNFPFLVKLEF 109
Query: 130 YCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHE 189
D ++ + E+A G + H R+ + ++P A EYLH
Sbjct: 110 SFKDNSNLYMVLEYAPGGEMFS--HLRRIGRFSEPHARF-------YAAQIVLTFEYLH- 159
Query: 190 KADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
+I+RD+K N+LI K+ADF + + + + + GT Y APE
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIKVADFGFAKR-----VKGRTWXLCGTPEYLAPE 209
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 183 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 242
G+++LH IIHRD+K SN+++ D KI DF L+ A + T + T Y
Sbjct: 136 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA---STNFMMTPYVVTRYY 189
Query: 243 HAPE 246
APE
Sbjct: 190 RAPE 193
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 183 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 242
G+++LH IIHRD+K SN+++ D KI DF L+ A T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTA---GTSFMMTPYVVTRYY 191
Query: 243 HAPE 246
APE
Sbjct: 192 RAPE 195
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/186 (20%), Positives = 72/186 (38%), Gaps = 16/186 (8%)
Query: 64 EITENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQPDE--EFLAQVSMVSRLK 120
E+ + + + IG G + +V + +G AIK +D + + ++ + L+
Sbjct: 7 ELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLR 66
Query: 121 HENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGA 180
H++ QL + E+ G L D + + LS ++ +
Sbjct: 67 HQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDR---------LSEEETRVVFRQI 117
Query: 181 AKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTF 240
+ Y+H + HRD+K N+L + K+ DF L + P H G+
Sbjct: 118 VSAVAYVHSQG---YAHRDLKPENLLFDEYHKLKLIDFGLCAK-PKGNKDYHLQTCCGSL 173
Query: 241 GYHAPE 246
Y APE
Sbjct: 174 AYAAPE 179
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 77/189 (40%), Gaps = 19/189 (10%)
Query: 63 KEITENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQPDEEFLAQVSMVSRLKH 121
K +F L+G+G++G+V K +G A+K L ++ +A SR+
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 122 EN---FVQLLGYCVDGTSRV-LAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIA 177
F+ L Y R+ E+A+ G L L + V + ++
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER---------VFTEERARFYG 111
Query: 178 VGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVL 237
LEYLH + +++RDIK N+++ D KI DF L + A +
Sbjct: 112 AEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKX--FC 166
Query: 238 GTFGYHAPE 246
GT Y APE
Sbjct: 167 GTPEYLAPE 175
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 75/202 (37%), Gaps = 43/202 (21%)
Query: 62 LKEITENFGTNALIGEGSYGRVYYGILKSGHAA-AIKKLDASK----QPD--EEFLAQVS 114
L E+ + + IG+GSYG V I A AIK ++ +K P E +V
Sbjct: 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVR 80
Query: 115 MVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILH-------------------- 154
++ +L H N +L D L E G L D L+
Sbjct: 81 LMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQIC 140
Query: 155 -----GRKGVKGAQPG--PVLSWQQRVKIAVGAAK----GLEYLHEKADPHIIHRDIKSS 203
+ + G+ G L + QR K+ + L YLH + I HRDIK
Sbjct: 141 PCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQG---ICHRDIKPE 197
Query: 204 NVLIFDDDV--AKIADFDLSNQ 223
N L + K+ DF LS +
Sbjct: 198 NFLFSTNKSFEIKLVDFGLSKE 219
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 183 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 242
G+++LH IIHRD+K SN+++ D KI DF L+ A T + T Y
Sbjct: 131 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTA---GTSFMMTPYVVTRYY 184
Query: 243 HAPE 246
APE
Sbjct: 185 RAPE 188
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 183 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 242
G+++LH IIHRD+K SN+++ D KI DF L+ A T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTA---GTSFMMTPYVVTRYY 191
Query: 243 HAPE 246
APE
Sbjct: 192 RAPE 195
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 183 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 242
G+++LH IIHRD+K SN+++ D KI DF L+ A T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA---CTNFMMTPYVVTRYY 191
Query: 243 HAPE 246
APE
Sbjct: 192 RAPE 195
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 86/203 (42%), Gaps = 26/203 (12%)
Query: 49 VQPIEVPAISVDELKEITENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASK---- 103
++ E P+ + +L + F +G GS+GRV K SG+ A+K LD K
Sbjct: 14 LKKWETPSQNTAQL----DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKL 69
Query: 104 QPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQ 163
+ E L + ++ + V+L D ++ + E+ + G + H R+ + ++
Sbjct: 70 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSE 127
Query: 164 PGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQ 223
P A EYLH +I+RD+K N+LI + ++ DF + +
Sbjct: 128 PHARF-------YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDEQGYIQVTDFGFAKR 177
Query: 224 APDMAARLHSTRVLGTFGYHAPE 246
+ + + GT Y APE
Sbjct: 178 -----VKGRTWXLCGTPEYLAPE 195
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 6/64 (9%)
Query: 183 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 242
GLE LH + I++RD+K N+L+ D +I+D L+ P+ + RV GT GY
Sbjct: 298 GLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPE--GQTIKGRV-GTVGY 351
Query: 243 HAPE 246
APE
Sbjct: 352 MAPE 355
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 75/177 (42%), Gaps = 22/177 (12%)
Query: 75 IGEGSYGRVYY-GILKSGHAAAIKKLDASK----QPDEEFLAQVSMVSRLKHENFVQLLG 129
+G GS+GRV +++G+ A+K LD K + E L + ++ + V+L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 130 YCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHE 189
D ++ + E+A G + H R+ + +P A EYLH
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFS--HLRRIGRFXEPHARF-------YAAQIVLTFEYLH- 158
Query: 190 KADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
+I+RD+K N++I K+ DF + + + + + GT Y APE
Sbjct: 159 --SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKR-----VKGRTWXLCGTPEYLAPE 208
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 6/64 (9%)
Query: 183 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 242
GLE LH + I++RD+K N+L+ D +I+D L+ P+ + RV GT GY
Sbjct: 298 GLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPE--GQTIKGRV-GTVGY 351
Query: 243 HAPE 246
APE
Sbjct: 352 MAPE 355
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 183 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 242
G+++LH IIHRD+K SN+++ D KI DF L+ A T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTA---GTSFMMTPYVVTRYY 191
Query: 243 HAPE 246
APE
Sbjct: 192 RAPE 195
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 183 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 242
G+++LH IIHRD+K SN+++ D KI DF L+ A T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTA---GTSFMMTPYVVTRYY 191
Query: 243 HAPE 246
APE
Sbjct: 192 RAPE 195
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 76/184 (41%), Gaps = 19/184 (10%)
Query: 68 NFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHEN--- 123
+F L+G+G++G+V K +G A+K L ++ +A SR+
Sbjct: 11 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 70
Query: 124 FVQLLGYCVDGTSRV-LAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAK 182
F+ L Y R+ E+A+ G L L + V + ++
Sbjct: 71 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER---------VFTEERARFYGAEIVS 121
Query: 183 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 242
LEYLH + +++RDIK N+++ D KI DF L + A + GT Y
Sbjct: 122 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKX--FCGTPEY 176
Query: 243 HAPE 246
APE
Sbjct: 177 LAPE 180
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 76/180 (42%), Gaps = 28/180 (15%)
Query: 75 IGEGSYGRVYYGILK-SGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVD 133
IG G++G K S A+K ++ ++ DE ++ L+H N V+ +
Sbjct: 26 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 85
Query: 134 GTSRVLAYEFASNGSLHDIL--HGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKA 191
T + E+AS G L + + GR A+ +QQ + G+ Y H
Sbjct: 86 PTHLAIVMEYASGGELFERICNAGRFSEDEAR----FFFQQLI-------SGVSYCHAM- 133
Query: 192 DPHIIHRDIKSSNVLIFDDDVA---KIADFDLSNQAPDMAARLHST--RVLGTFGYHAPE 246
+ HRD+K N L+ D A KI DF S ++ LHS +GT Y APE
Sbjct: 134 --QVCHRDLKLENTLL-DGSPAPRLKICDFGYSK-----SSVLHSQPKSTVGTPAYIAPE 185
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 77/189 (40%), Gaps = 19/189 (10%)
Query: 63 KEITENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQPDEEFLAQVSMVSRLKH 121
K +F L+G+G++G+V K +G A+K L ++ +A SR+
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 122 EN---FVQLLGYCVDGTSRV-LAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIA 177
F+ L Y R+ E+A+ G L L + V + ++
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER---------VFTEERARFYG 111
Query: 178 VGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVL 237
LEYLH + +++RDIK N+++ D KI DF L + A +
Sbjct: 112 AEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKX--FC 166
Query: 238 GTFGYHAPE 246
GT Y APE
Sbjct: 167 GTPEYLAPE 175
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 183 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 242
G+++LH IIHRD+K SN+++ D KI DF L+ A T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA---GTSFMMTPYVVTRYY 191
Query: 243 HAPE 246
APE
Sbjct: 192 RAPE 195
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 183 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 242
G+++LH IIHRD+K SN+++ D KI DF L+ A T + T Y
Sbjct: 176 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 229
Query: 243 HAPE 246
APE
Sbjct: 230 RAPE 233
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 183 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 242
G+++LH IIHRD+K SN+++ D KI DF L+ A T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA---GTSFMMTPYVVTRYY 191
Query: 243 HAPE 246
APE
Sbjct: 192 RAPE 195
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 183 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 242
G+++LH IIHRD+K SN+++ D KI DF L+ A T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA---GTSFMMTPYVVTRYY 191
Query: 243 HAPE 246
APE
Sbjct: 192 RAPE 195
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 79/178 (44%), Gaps = 21/178 (11%)
Query: 75 IGEGSYGRVYYGILKSGHAAAIKKLD---ASKQPDEEFLAQVSMVSRLKH--ENFVQLLG 129
IG G +V+ + + AIK ++ A Q + + +++ +++L+ + ++L
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 130 YCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHE 189
Y + + E N L+ L +K + W+++ LE +H
Sbjct: 124 YEITDQYIYMVME-CGNIDLNSWLKKKKSID--------PWERKSY----WKNMLEAVHT 170
Query: 190 KADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQA-PDMAARLHSTRVLGTFGYHAPE 246
I+H D+K +N LI D + K+ DF ++NQ PD + + ++V G Y PE
Sbjct: 171 IHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQV-GAVNYMPPE 226
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 183 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 242
G+++LH IIHRD+K SN+++ D KI DF L+ A T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA---GTSFMMTPYVVTRYY 191
Query: 243 HAPE 246
APE
Sbjct: 192 RAPE 195
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 183 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 242
G+++LH IIHRD+K SN+++ D KI DF L+ A T + T Y
Sbjct: 143 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 196
Query: 243 HAPE 246
APE
Sbjct: 197 RAPE 200
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 76/184 (41%), Gaps = 19/184 (10%)
Query: 68 NFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHEN--- 123
+F L+G+G++G+V K +G A+K L ++ +A SR+
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 65
Query: 124 FVQLLGYCVDGTSRV-LAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAK 182
F+ L Y R+ E+A+ G L L + V + ++
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER---------VFTEERARFYGAEIVS 116
Query: 183 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 242
LEYLH + +++RDIK N+++ D KI DF L + A + GT Y
Sbjct: 117 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKX--FCGTPEY 171
Query: 243 HAPE 246
APE
Sbjct: 172 LAPE 175
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 183 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 242
G+++LH IIHRD+K SN+++ D KI DF L+ A T + T Y
Sbjct: 176 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 229
Query: 243 HAPE 246
APE
Sbjct: 230 RAPE 233
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 183 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 242
G+++LH IIHRD+K SN+++ D KI DF L+ A T + T Y
Sbjct: 139 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 192
Query: 243 HAPE 246
APE
Sbjct: 193 RAPE 196
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 183 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 242
G+++LH IIHRD+K SN+++ D KI DF L+ A T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 191
Query: 243 HAPE 246
APE
Sbjct: 192 RAPE 195
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 85/203 (41%), Gaps = 26/203 (12%)
Query: 49 VQPIEVPAISVDELKEITENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASK---- 103
++ E P+ + +L + F +G GS+GRV K SG+ A+K LD K
Sbjct: 27 LKKWETPSQNTAQL----DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKL 82
Query: 104 QPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQ 163
+ E L + ++ + V+L D ++ + E+ + G + H R+ + ++
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSE 140
Query: 164 PGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQ 223
P A EYLH +I+RD+K N+LI ++ DF + +
Sbjct: 141 PHARF-------YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR 190
Query: 224 APDMAARLHSTRVLGTFGYHAPE 246
+ + + GT Y APE
Sbjct: 191 -----VKGRTWXLCGTPEYLAPE 208
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 183 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 242
G+++LH IIHRD+K SN+++ D KI DF L+ A T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA---GTSFMMTPYVVTRYY 191
Query: 243 HAPE 246
APE
Sbjct: 192 RAPE 195
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 85/203 (41%), Gaps = 26/203 (12%)
Query: 49 VQPIEVPAISVDELKEITENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASK---- 103
++ E P+ + +L + F +G GS+GRV K SG+ A+K LD K
Sbjct: 28 LKKWETPSQNTAQL----DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKL 83
Query: 104 QPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQ 163
+ E L + ++ + V+L D ++ + E+ + G + H R+ + ++
Sbjct: 84 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSE 141
Query: 164 PGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQ 223
P A EYLH +I+RD+K N+LI ++ DF + +
Sbjct: 142 PHARF-------YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR 191
Query: 224 APDMAARLHSTRVLGTFGYHAPE 246
+ + + GT Y APE
Sbjct: 192 -----VKGRTWXLCGTPEYLAPE 209
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 75/177 (42%), Gaps = 22/177 (12%)
Query: 75 IGEGSYGRVYYGILK-SGHAAAIKKLDASK----QPDEEFLAQVSMVSRLKHENFVQLLG 129
+G GS+GRV K +G+ A+K LD K + E L + ++ + V+L
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 130 YCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHE 189
D ++ + E+A G + H R+ + ++P A EYLH
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFS--HLRRIGRFSEPHARF-------YAAQIVLTFEYLH- 159
Query: 190 KADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
+I+RD+K N++I K+ DF + + + + + GT Y APE
Sbjct: 160 --SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKR-----VKGRTWXLCGTPEYLAPE 209
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 183 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 242
G+++LH IIHRD+K SN+++ D KI DF L+ A T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 191
Query: 243 HAPE 246
APE
Sbjct: 192 RAPE 195
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 85/203 (41%), Gaps = 26/203 (12%)
Query: 49 VQPIEVPAISVDELKEITENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASK---- 103
++ E P+ + +L + F +G GS+GRV K SG+ A+K LD K
Sbjct: 27 LKKWETPSQNTAQL----DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKL 82
Query: 104 QPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQ 163
+ E L + ++ + V+L D ++ + E+ + G + H R+ + ++
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSE 140
Query: 164 PGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQ 223
P A EYLH +I+RD+K N+LI ++ DF + +
Sbjct: 141 PHARF-------YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR 190
Query: 224 APDMAARLHSTRVLGTFGYHAPE 246
+ + + GT Y APE
Sbjct: 191 -----VKGRTWXLCGTPEYLAPE 208
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 85/203 (41%), Gaps = 26/203 (12%)
Query: 49 VQPIEVPAISVDELKEITENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASK---- 103
++ E P+ + +L + F +G GS+GRV K SG+ A+K LD K
Sbjct: 27 LKKWETPSQNTAQL----DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKL 82
Query: 104 QPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQ 163
+ E L + ++ + V+L D ++ + E+ + G + H R+ + ++
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSE 140
Query: 164 PGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQ 223
P A EYLH +I+RD+K N+LI ++ DF + +
Sbjct: 141 PHARF-------YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR 190
Query: 224 APDMAARLHSTRVLGTFGYHAPE 246
+ + + GT Y APE
Sbjct: 191 -----VKGRTWXLCGTPEYLAPE 208
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 183 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 242
G+++LH IIHRD+K SN+++ D KI DF L+ A T + T Y
Sbjct: 139 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 192
Query: 243 HAPE 246
APE
Sbjct: 193 RAPE 196
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 85/203 (41%), Gaps = 26/203 (12%)
Query: 49 VQPIEVPAISVDELKEITENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASK---- 103
++ E P+ + +L + F +G GS+GRV K SG+ A+K LD K
Sbjct: 27 LKKWETPSQNTAQL----DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKL 82
Query: 104 QPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQ 163
+ E L + ++ + V+L D ++ + E+ + G + H R+ + ++
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSE 140
Query: 164 PGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQ 223
P A EYLH +I+RD+K N+LI ++ DF + +
Sbjct: 141 PHARF-------YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR 190
Query: 224 APDMAARLHSTRVLGTFGYHAPE 246
+ + + GT Y APE
Sbjct: 191 -----VKGRTWXLCGTPEYLAPE 208
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 85/203 (41%), Gaps = 26/203 (12%)
Query: 49 VQPIEVPAISVDELKEITENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASK---- 103
++ E P+ + +L + F +G GS+GRV K SG+ A+K LD K
Sbjct: 27 LKKWETPSQNTAQL----DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKL 82
Query: 104 QPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQ 163
+ E L + ++ + V+L D ++ + E+ + G + H R+ + ++
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSE 140
Query: 164 PGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQ 223
P A EYLH +I+RD+K N+LI ++ DF + +
Sbjct: 141 PHARF-------YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR 190
Query: 224 APDMAARLHSTRVLGTFGYHAPE 246
+ + + GT Y APE
Sbjct: 191 -----VKGRTWXLCGTPEYLAPE 208
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 183 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 242
G+++LH IIHRD+K SN+++ D KI DF L+ A T + T Y
Sbjct: 137 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 190
Query: 243 HAPE 246
APE
Sbjct: 191 RAPE 194
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 183 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 242
G+++LH IIHRD+K SN+++ D KI DF L+ A T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 191
Query: 243 HAPE 246
APE
Sbjct: 192 RAPE 195
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 183 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 242
G+++LH IIHRD+K SN+++ D KI DF L+ A T + T Y
Sbjct: 139 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 192
Query: 243 HAPE 246
APE
Sbjct: 193 RAPE 196
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 183 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 242
G+++LH IIHRD+K SN+++ D KI DF L+ A T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 191
Query: 243 HAPE 246
APE
Sbjct: 192 RAPE 195
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 85/203 (41%), Gaps = 26/203 (12%)
Query: 49 VQPIEVPAISVDELKEITENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASK---- 103
++ E P+ + +L + F +G GS+GRV K SG+ A+K LD K
Sbjct: 27 LKKWETPSQNTAQL----DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKL 82
Query: 104 QPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQ 163
+ E L + ++ + V+L D ++ + E+ + G + H R+ + ++
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSE 140
Query: 164 PGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQ 223
P A EYLH +I+RD+K N+LI ++ DF + +
Sbjct: 141 PHARF-------YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR 190
Query: 224 APDMAARLHSTRVLGTFGYHAPE 246
+ + + GT Y APE
Sbjct: 191 -----VKGRTWXLCGTPEYLAPE 208
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 183 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 242
G+++LH IIHRD+K SN+++ D KI DF L+ A T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 191
Query: 243 HAPE 246
APE
Sbjct: 192 RAPE 195
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 183 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 242
G+++LH IIHRD+K SN+++ D KI DF L+ A T + T Y
Sbjct: 132 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 185
Query: 243 HAPE 246
APE
Sbjct: 186 RAPE 189
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 183 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 242
G+++LH IIHRD+K SN+++ D KI DF L+ A T + T Y
Sbjct: 132 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 185
Query: 243 HAPE 246
APE
Sbjct: 186 RAPE 189
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 183 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 242
G+++LH IIHRD+K SN+++ D KI DF L+ A T + T Y
Sbjct: 131 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 184
Query: 243 HAPE 246
APE
Sbjct: 185 RAPE 188
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 83/203 (40%), Gaps = 26/203 (12%)
Query: 49 VQPIEVPAISVDELKEITENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASK---- 103
++ E P+ + +L + F +G GS+GRV K SG+ A+K LD K
Sbjct: 27 LKKWETPSQNTAQL----DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKL 82
Query: 104 QPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQ 163
+ E L + ++ + V+L D ++ + E+ + G + H R+ + ++
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSE 140
Query: 164 PGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQ 223
P A EYLH +I+RD+K N+LI ++ DF + +
Sbjct: 141 PHARF-------YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR 190
Query: 224 APDMAARLHSTRVLGTFGYHAPE 246
L GT Y APE
Sbjct: 191 VKGRTWXLX-----GTPEYLAPE 208
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 83/203 (40%), Gaps = 26/203 (12%)
Query: 49 VQPIEVPAISVDELKEITENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASK---- 103
++ E P+ + +L + F +G GS+GRV K SG+ A+K LD K
Sbjct: 48 LKKWETPSQNTAQL----DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKL 103
Query: 104 QPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQ 163
+ E L + ++ + V+L D ++ + E+ + G + H R+ + ++
Sbjct: 104 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSE 161
Query: 164 PGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQ 223
P A EYLH +I+RD+K N+LI ++ DF + +
Sbjct: 162 PHARF-------YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR 211
Query: 224 APDMAARLHSTRVLGTFGYHAPE 246
L GT Y APE
Sbjct: 212 VKGATWTL-----CGTPEYLAPE 229
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 183 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 242
G+++LH IIHRD+K SN+++ D KI DF L+ A T + T Y
Sbjct: 132 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 185
Query: 243 HAPE 246
APE
Sbjct: 186 RAPE 189
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 70/155 (45%), Gaps = 22/155 (14%)
Query: 74 LIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQP---DEEFLAQVSMVSRLK-HENFVQLL 128
++GEG++ RV I L + A+K ++ KQP +V M+ + + H N ++L+
Sbjct: 20 VLGEGAHARVQTCINLITSQEYAVKIIE--KQPGHIRSRVFREVEMLYQCQGHRNVLELI 77
Query: 129 GYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLH 188
+ + L +E GS+ +H R+ + V+ A L++LH
Sbjct: 78 EFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQ---------DVASALDFLH 128
Query: 189 EKADPHIIHRDIKSSNVLIFDDD---VAKIADFDL 220
K I HRD+K N+L + KI DFDL
Sbjct: 129 NKG---IAHRDLKPENILCEHPNQVSPVKICDFDL 160
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 76/181 (41%), Gaps = 19/181 (10%)
Query: 74 LIGEGSYGRVYYGI----LKSGHAAAIKKLDASKQPDEE--FLAQVSMVSRLKHENFVQL 127
L+GEGSYG+V + L +KK + P+ E ++ ++ RL+H+N +QL
Sbjct: 12 LLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQL 71
Query: 128 LG--YCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLE 185
+ Y + + E+ G + ++L + P Q GLE
Sbjct: 72 VDVLYNEEKQKMYMVMEYCVCG-MQEMLD-------SVPEKRFPVCQAHGYFCQLIDGLE 123
Query: 186 YLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAP 245
YLH + I+H+DIK N+L+ KI+ ++ AA G+ + P
Sbjct: 124 YLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPP 180
Query: 246 E 246
E
Sbjct: 181 E 181
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 84/203 (41%), Gaps = 26/203 (12%)
Query: 49 VQPIEVPAISVDELKEITENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASK---- 103
++ E P+ + +L + F +G GS+GRV K SG+ A+K LD K
Sbjct: 27 LKKWETPSQNTAQL----DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKL 82
Query: 104 QPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQ 163
+ E L + ++ + V+L D ++ + E+ + G + H R+ + +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFXE 140
Query: 164 PGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQ 223
P A EYLH +I+RD+K N+LI ++ DF + +
Sbjct: 141 PHARF-------YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR 190
Query: 224 APDMAARLHSTRVLGTFGYHAPE 246
+ + + GT Y APE
Sbjct: 191 -----VKGRTWXLCGTPEYLAPE 208
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 76/177 (42%), Gaps = 22/177 (12%)
Query: 75 IGEGSYGRVYY-GILKSGHAAAIKKLDASK----QPDEEFLAQVSMVSRLKHENFVQLLG 129
+G GS+GRV +++G+ A+K LD K + E L + ++ + V+L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 130 YCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHE 189
D ++ + E+A G + H R+ + ++P A EYLH
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFS--HLRRIGRFSEPHARF-------YAAQIVLTFEYLH- 158
Query: 190 KADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
+I+RD+K N++I ++ DF + + + + + GT Y APE
Sbjct: 159 --SLDLIYRDLKPENLMIDQQGYIQVTDFGFAKR-----VKGRTWXLCGTPEYLAPE 208
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 77/181 (42%), Gaps = 30/181 (16%)
Query: 75 IGEGSYG--RVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCV 132
IG G++G R+ L + A+K ++ DE ++ L+H N V+ +
Sbjct: 28 IGSGNFGVARLMRDKL-TKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVIL 86
Query: 133 DGTSRVLAYEFASNGSLHDIL--HGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEK 190
T + E+AS G L++ + GR A+ +QQ + G+ Y H
Sbjct: 87 TPTHLAIIMEYASGGELYERICNAGRFSEDEAR----FFFQQLL-------SGVSYCHSM 135
Query: 191 ADPHIIHRDIKSSNVLIFDDDVA---KIADFDLSNQAPDMAARLHST--RVLGTFGYHAP 245
I HRD+K N L+ D A KI DF S ++ LHS +GT Y AP
Sbjct: 136 ---QICHRDLKLENTLL-DGSPAPRLKICDFGYSK-----SSVLHSQPKSTVGTPAYIAP 186
Query: 246 E 246
E
Sbjct: 187 E 187
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 168 LSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSN 222
L+ + + + AKG+E+L A IHRD+ + N+L+ + +V KI DF L+
Sbjct: 190 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 241
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 84/203 (41%), Gaps = 26/203 (12%)
Query: 49 VQPIEVPAISVDELKEITENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASK---- 103
++ E P+ + +L + F +G GS+GRV K SG+ A+K LD K
Sbjct: 48 LKKWETPSQNTAQL----DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKL 103
Query: 104 QPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQ 163
+ E L + ++ + V+L D ++ + E+ + G + H R+ + +
Sbjct: 104 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFXE 161
Query: 164 PGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQ 223
P A EYLH +I+RD+K N+LI ++ DF + +
Sbjct: 162 PHARF-------YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR 211
Query: 224 APDMAARLHSTRVLGTFGYHAPE 246
+ + + GT Y APE
Sbjct: 212 -----VKGRTWXLCGTPEYLAPE 229
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 168 LSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSN 222
L+ + + + AKG+E+L A IHRD+ + N+L+ + +V KI DF L+
Sbjct: 188 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 239
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 84/198 (42%), Gaps = 27/198 (13%)
Query: 59 VDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSR 118
V +++ E+F +IG G++G V A +K +A K + L + M+ R
Sbjct: 66 VKQMRLHREDFEILKVIGRGAFGEV----------AVVKLKNADKVFAMKILNKWEMLKR 115
Query: 119 LKHENFVQLLGYCVDGTSR---VLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVK 175
+ F + V+G S+ L Y F + +L+ ++ G G +L+ + +
Sbjct: 116 AETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVG------GDLLTLLSKFE 169
Query: 176 IAVGAAKGLEYLHEKA-------DPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMA 228
+ YL E H +HRDIK N+L+ + ++ADF + +
Sbjct: 170 DRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLME-D 228
Query: 229 ARLHSTRVLGTFGYHAPE 246
+ S+ +GT Y +PE
Sbjct: 229 GTVQSSVAVGTPDYISPE 246
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 75/177 (42%), Gaps = 22/177 (12%)
Query: 75 IGEGSYGRVYY-GILKSGHAAAIKKLDASK----QPDEEFLAQVSMVSRLKHENFVQLLG 129
+G GS+GRV +++G+ A+K LD K + E L + ++ + +L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEF 109
Query: 130 YCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHE 189
D ++ + E+A G + H R+ + ++P A EYLH
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFS--HLRRIGRFSEPHARF-------YAAQIVLTFEYLH- 159
Query: 190 KADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
+I+RD+K N++I K+ DF + + + + + GT Y APE
Sbjct: 160 --SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKR-----VKGRTWXLCGTPEYLAPE 209
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 75/177 (42%), Gaps = 22/177 (12%)
Query: 75 IGEGSYGRVYY-GILKSGHAAAIKKLDASK----QPDEEFLAQVSMVSRLKHENFVQLLG 129
+G GS+GRV +++G+ A+K LD K + E L + ++ + +L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEF 109
Query: 130 YCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHE 189
D ++ + E+A G + H R+ + ++P A EYLH
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFS--HLRRIGRFSEPHARF-------YAAQIVLTFEYLH- 159
Query: 190 KADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
+I+RD+K N++I K+ DF + + + + + GT Y APE
Sbjct: 160 --SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKR-----VKGRTWXLCGTPEYLAPE 209
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 85/203 (41%), Gaps = 26/203 (12%)
Query: 49 VQPIEVPAISVDELKEITENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASK---- 103
++ E P+ + +L + F +G GS+GRV K SG+ A+K LD K
Sbjct: 27 LKKWETPSQNTAQL----DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKL 82
Query: 104 QPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQ 163
+ E L + ++ + V+L D ++ + E+ + G + H R+ + ++
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSE 140
Query: 164 PGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQ 223
P A EYLH +I+RD+K N+LI ++ DF + +
Sbjct: 141 PHARF-------YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR 190
Query: 224 APDMAARLHSTRVLGTFGYHAPE 246
+ + + GT Y APE
Sbjct: 191 -----VKGRTWXLAGTPEYLAPE 208
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 84/203 (41%), Gaps = 26/203 (12%)
Query: 49 VQPIEVPAISVDELKEITENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASK---- 103
++ E P+ + +L + F +G GS+GRV K SG+ A+K LD K
Sbjct: 27 LKKWETPSQNTAQL----DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKL 82
Query: 104 QPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQ 163
+ E L + ++ + V+L D ++ + E+ + G + H R+ + +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFXE 140
Query: 164 PGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQ 223
P A EYLH +I+RD+K N+LI ++ DF + +
Sbjct: 141 PHARF-------YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR 190
Query: 224 APDMAARLHSTRVLGTFGYHAPE 246
+ + + GT Y APE
Sbjct: 191 -----VKGRTWXLCGTPEYLAPE 208
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 183 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 242
G+++LH IIHRD+K SN+++ D KI DF L+ A T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPEVVTRYY 191
Query: 243 HAPE 246
APE
Sbjct: 192 RAPE 195
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 76/177 (42%), Gaps = 22/177 (12%)
Query: 75 IGEGSYGRVYY-GILKSGHAAAIKKLDASK----QPDEEFLAQVSMVSRLKHENFVQLLG 129
+G GS+GRV +++G+ A+K LD K + E L + ++ + V+L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 130 YCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHE 189
D ++ + E+ + G + H R+ + ++P A EYLH
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPHARF-------YAAQIVLTFEYLH- 158
Query: 190 KADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
+I+RD+K N+LI ++ DF + + + + + GT Y APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VKGRTWXLCGTPEYLAPE 208
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 84/203 (41%), Gaps = 26/203 (12%)
Query: 49 VQPIEVPAISVDELKEITENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASK---- 103
++ E P+ + +L + F +G GS+GRV K SG+ A+K LD K
Sbjct: 27 LKKWETPSQNTAQL----DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKL 82
Query: 104 QPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQ 163
+ E L + ++ + V+L D ++ + E+ + G + H R+ + +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFXE 140
Query: 164 PGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQ 223
P A EYLH +I+RD+K N+LI ++ DF + +
Sbjct: 141 PHARF-------YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR 190
Query: 224 APDMAARLHSTRVLGTFGYHAPE 246
+ + + GT Y APE
Sbjct: 191 -----VKGRTWXLCGTPEYLAPE 208
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 168 LSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSN 222
L+ + + + AKG+E+L A IHRD+ + N+L+ + +V KI DF L+
Sbjct: 197 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 248
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 168 LSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSN 222
L+ + + + AKG+E+L A IHRD+ + N+L+ + +V KI DF L+
Sbjct: 195 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 246
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 84/203 (41%), Gaps = 26/203 (12%)
Query: 49 VQPIEVPAISVDELKEITENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASK---- 103
++ E P+ + +L + F +G GS+GRV K SG+ A+K LD K
Sbjct: 22 LKKWETPSQNTAQL----DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKL 77
Query: 104 QPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQ 163
+ E L + ++ + V+L D ++ + E+ + G + H R+ + +
Sbjct: 78 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFXE 135
Query: 164 PGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQ 223
P A EYLH +I+RD+K N+LI ++ DF + +
Sbjct: 136 PHARF-------YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR 185
Query: 224 APDMAARLHSTRVLGTFGYHAPE 246
+ + + GT Y APE
Sbjct: 186 -----VKGRTWXLCGTPEYLAPE 203
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 80/186 (43%), Gaps = 20/186 (10%)
Query: 67 ENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQPDEEFLAQVS----MVSRLKH 121
++F +IG GSY +V LK + A+K + D+E + V + + +
Sbjct: 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN 68
Query: 122 ENFVQLLGYCVDGTSRVL-AYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGA 180
F+ L C SR+ E+ + G L + H ++ K L + +
Sbjct: 69 HPFLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQRQRK-------LPEEHARFYSAEI 119
Query: 181 AKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTF 240
+ L YLHE+ II+RD+K NVL+ + K+ D+ + + + ++ GT
Sbjct: 120 SLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEG--LRPGDTTSXFCGTP 174
Query: 241 GYHAPE 246
Y APE
Sbjct: 175 NYIAPE 180
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 77/204 (37%), Gaps = 30/204 (14%)
Query: 59 VDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPD------------ 106
+ EL + + I GSYG V G+ G AIK++ +
Sbjct: 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLC 73
Query: 107 EEFLAQVSMVSRLKHENFVQLLGYCVD----GTSRVLAYEFASNGSLHDILHGRKGVKGA 162
+ L ++ +++ H N + L V ++ L ++H ++ V
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISP 133
Query: 163 QPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSN 222
Q + + GL LHE ++HRD+ N+L+ D++ I DF+L+
Sbjct: 134 QHIQYFMYHILL--------GLHVLHEAG---VVHRDLHPGNILLADNNDITICDFNLAR 182
Query: 223 QAPDMAARLHSTRVLGTFGYHAPE 246
+ A + T + Y APE
Sbjct: 183 ED---TADANKTHYVTHRWYRAPE 203
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 77/204 (37%), Gaps = 30/204 (14%)
Query: 59 VDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPD------------ 106
+ EL + + I GSYG V G+ G AIK++ +
Sbjct: 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLC 73
Query: 107 EEFLAQVSMVSRLKHENFVQLLGYCVD----GTSRVLAYEFASNGSLHDILHGRKGVKGA 162
+ L ++ +++ H N + L V ++ L ++H ++ V
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISP 133
Query: 163 QPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSN 222
Q + + GL LHE ++HRD+ N+L+ D++ I DF+L+
Sbjct: 134 QHIQYFMYHILL--------GLHVLHEAG---VVHRDLHPGNILLADNNDITICDFNLAR 182
Query: 223 QAPDMAARLHSTRVLGTFGYHAPE 246
+ A + T + Y APE
Sbjct: 183 ED---TADANKTHYVTHRWYRAPE 203
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 75/181 (41%), Gaps = 23/181 (12%)
Query: 68 NFGTNALIGEGSYGRVY-YGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQ 126
FG L+ E + GR Y ILK K++ +K L + ++ +H F+
Sbjct: 163 TFGKVILVKEKATGRYYAMKILK-------KEVIVAKDEVAHTLTENRVLQNSRHP-FLT 214
Query: 127 LLGYCVDGTSRV-LAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLE 185
L Y R+ E+A+ G L L + V S + L+
Sbjct: 215 ALKYSFQTHDRLCFVMEYANGGELFFHLSRER---------VFSEDRARFYGAEIVSALD 265
Query: 186 YLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAP 245
YLH ++ ++++RD+K N+++ D KI DF L + A + + GT Y AP
Sbjct: 266 YLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT--FCGTPEYLAP 321
Query: 246 E 246
E
Sbjct: 322 E 322
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 75/181 (41%), Gaps = 23/181 (12%)
Query: 68 NFGTNALIGEGSYGRVY-YGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQ 126
FG L+ E + GR Y ILK K++ +K L + ++ +H F+
Sbjct: 160 TFGKVILVKEKATGRYYAMKILK-------KEVIVAKDEVAHTLTENRVLQNSRHP-FLT 211
Query: 127 LLGYCVDGTSRV-LAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLE 185
L Y R+ E+A+ G L L + V S + L+
Sbjct: 212 ALKYSFQTHDRLCFVMEYANGGELFFHLSRER---------VFSEDRARFYGAEIVSALD 262
Query: 186 YLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAP 245
YLH ++ ++++RD+K N+++ D KI DF L + A + + GT Y AP
Sbjct: 263 YLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT--FCGTPEYLAP 318
Query: 246 E 246
E
Sbjct: 319 E 319
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 75/177 (42%), Gaps = 22/177 (12%)
Query: 75 IGEGSYGRVYY-GILKSGHAAAIKKLDASK----QPDEEFLAQVSMVSRLKHENFVQLLG 129
+G GS+GRV +++G+ A+K LD K + E L + ++ + V+L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 130 YCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHE 189
D ++ + E+ G + H R+ + ++P A EYLH
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPHARF-------YAAQIVLTFEYLH- 158
Query: 190 KADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
+I+RD+K N+LI ++ DF + + + + + GT Y APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VKGRTWXLCGTPEYLAPE 208
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 80/186 (43%), Gaps = 20/186 (10%)
Query: 67 ENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQPDEEFLAQVS----MVSRLKH 121
++F +IG GSY +V LK + A+K + D+E + V + + +
Sbjct: 20 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN 79
Query: 122 ENFVQLLGYCVDGTSRVL-AYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGA 180
F+ L C SR+ E+ + G L + H ++ K L + +
Sbjct: 80 HPFLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQRQRK-------LPEEHARFYSAEI 130
Query: 181 AKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTF 240
+ L YLHE+ II+RD+K NVL+ + K+ D+ + + + ++ GT
Sbjct: 131 SLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEG--LRPGDTTSXFCGTP 185
Query: 241 GYHAPE 246
Y APE
Sbjct: 186 NYIAPE 191
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 75/177 (42%), Gaps = 22/177 (12%)
Query: 75 IGEGSYGRVYY-GILKSGHAAAIKKLDASK----QPDEEFLAQVSMVSRLKHENFVQLLG 129
+G GS+GRV +++G+ A+K LD K + E L + ++ + V+L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 130 YCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHE 189
D ++ + E+ G + H R+ + ++P A EYLH
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPHARF-------YAAQIVLTFEYLH- 159
Query: 190 KADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
+I+RD+K N+LI ++ DF + + + + + GT Y APE
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VKGRTWXLCGTPEYLAPE 209
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 75/177 (42%), Gaps = 22/177 (12%)
Query: 75 IGEGSYGRVYY-GILKSGHAAAIKKLDASK----QPDEEFLAQVSMVSRLKHENFVQLLG 129
+G GS+GRV +++G+ A+K LD K + E L + ++ + V+L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 130 YCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHE 189
D ++ + E+ G + H R+ + ++P A EYLH
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPHARF-------YAAQIVLTFEYLH- 159
Query: 190 KADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
+I+RD+K N+LI ++ DF + + + + + GT Y APE
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VKGRTWTLCGTPEYLAPE 209
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 75/177 (42%), Gaps = 22/177 (12%)
Query: 75 IGEGSYGRVYY-GILKSGHAAAIKKLDASK----QPDEEFLAQVSMVSRLKHENFVQLLG 129
+G GS+GRV +++G+ A+K LD K + E L + ++ + V+L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 130 YCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHE 189
D ++ + E+ G + H R+ + ++P A EYLH
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPHARF-------YAAQIVLTFEYLH- 158
Query: 190 KADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
+I+RD+K N+LI ++ DF + + + + + GT Y APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VKGRTWXLCGTPEYLAPE 208
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 85/203 (41%), Gaps = 26/203 (12%)
Query: 49 VQPIEVPAISVDELKEITENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASK---- 103
++ E P+ + +L + F +G GS+GRV K SG+ A+K LD K
Sbjct: 27 LKKWETPSQNTAQL----DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKL 82
Query: 104 QPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQ 163
+ E L + ++ + V+L D ++ + E+ + G + H R+ + ++
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSE 140
Query: 164 PGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQ 223
P A EYLH +I+RD+K N++I ++ DF + +
Sbjct: 141 PHARF-------YAAQIVLTFEYLH---SLDLIYRDLKPENLIIDQQGYIQVTDFGFAKR 190
Query: 224 APDMAARLHSTRVLGTFGYHAPE 246
+ + + GT Y APE
Sbjct: 191 -----VKGRTWXLCGTPEYLAPE 208
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 75/177 (42%), Gaps = 22/177 (12%)
Query: 75 IGEGSYGRVYY-GILKSGHAAAIKKLDASK----QPDEEFLAQVSMVSRLKHENFVQLLG 129
+G GS+GRV +++G+ A+K LD K + E L + ++ + V+L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 130 YCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHE 189
D ++ + E+ G + H R+ + ++P A EYLH
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPHARF-------YAAQIVLTFEYLH- 158
Query: 190 KADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
+I+RD+K N+LI ++ DF + + + + + GT Y APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VKGRTWXLCGTPEYLAPE 208
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 80/186 (43%), Gaps = 20/186 (10%)
Query: 67 ENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQPDEEFLAQVS----MVSRLKH 121
++F +IG GSY +V LK + A+K + D+E + V + + +
Sbjct: 5 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN 64
Query: 122 ENFVQLLGYCVDGTSRVL-AYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGA 180
F+ L C SR+ E+ + G L + H ++ K L + +
Sbjct: 65 HPFLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQRQRK-------LPEEHARFYSAEI 115
Query: 181 AKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTF 240
+ L YLHE+ II+RD+K NVL+ + K+ D+ + + + ++ GT
Sbjct: 116 SLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEG--LRPGDTTSXFCGTP 170
Query: 241 GYHAPE 246
Y APE
Sbjct: 171 NYIAPE 176
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 74/177 (41%), Gaps = 22/177 (12%)
Query: 75 IGEGSYGRVYY-GILKSGHAAAIKKLDASK----QPDEEFLAQVSMVSRLKHENFVQLLG 129
+G GS+GRV +++G+ A+K LD K + E L + ++ + +L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEF 109
Query: 130 YCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHE 189
D ++ + E+A G + H R+ + +P A EYLH
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFS--HLRRIGRFXEPHARF-------YAAQIVLTFEYLH- 159
Query: 190 KADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
+I+RD+K N++I K+ DF + + + + + GT Y APE
Sbjct: 160 --SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKR-----VKGRTWXLCGTPEYLAPE 209
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 82/198 (41%), Gaps = 27/198 (13%)
Query: 55 PAISVDELKEITE----NFGTNALIGEGSYGRVY-YGILKSGHAAAIKKLDASKQPDEEF 109
P ++++E + + FG L+ E + GR Y ILK K++ +K
Sbjct: 5 PRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILK-------KEVIVAKDEVAHT 57
Query: 110 LAQVSMVSRLKHENFVQLLGYCVDGTSRV-LAYEFASNGSLHDILHGRKGVKGAQPGPVL 168
L + ++ +H F+ L Y R+ E+A+ G L L + V
Sbjct: 58 LTENRVLQNSRHP-FLTALKYSFQTHDRLCFVMEYANGGELFFHLSRER---------VF 107
Query: 169 SWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMA 228
S + L+YLH ++ ++++RD+K N+++ D KI DF L +
Sbjct: 108 SEDRARFYGAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG 165
Query: 229 ARLHSTRVLGTFGYHAPE 246
A + GT Y APE
Sbjct: 166 ATMKX--FCGTPEYLAPE 181
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 75/177 (42%), Gaps = 22/177 (12%)
Query: 75 IGEGSYGRVYY-GILKSGHAAAIKKLDASK----QPDEEFLAQVSMVSRLKHENFVQLLG 129
+G GS+GRV +++G+ A+K LD K + E L + ++ + V+L
Sbjct: 35 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 94
Query: 130 YCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHE 189
D ++ + E+ G + H R+ + ++P A EYLH
Sbjct: 95 SFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPHARFY-------AAQIVLTFEYLH- 144
Query: 190 KADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
+I+RD+K N+LI ++ DF + + + + + GT Y APE
Sbjct: 145 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VKGRTWTLCGTPEYLAPE 194
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 183 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 242
G+++LH IIHRD+K SN+++ D KI DF L+ A + T Y
Sbjct: 140 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMVPFVVTRYY 193
Query: 243 HAPE 246
APE
Sbjct: 194 RAPE 197
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 74/177 (41%), Gaps = 22/177 (12%)
Query: 75 IGEGSYGRVYY-GILKSGHAAAIKKLDASK----QPDEEFLAQVSMVSRLKHENFVQLLG 129
+G GS+GRV +++G+ A+K LD K + E L + ++ + V+L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 130 YCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHE 189
D ++ + E+ G + H R+ + +P A EYLH
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFXEPHARF-------YAAQIVLTFEYLH- 158
Query: 190 KADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
+I+RD+K N+LI ++ DF + + + + + GT Y APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VKGRTWXLCGTPEYLAPE 208
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 74/177 (41%), Gaps = 22/177 (12%)
Query: 75 IGEGSYGRVYY-GILKSGHAAAIKKLDASK----QPDEEFLAQVSMVSRLKHENFVQLLG 129
+G GS+GRV +++G+ A+K LD K + E L + ++ + V+L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 130 YCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHE 189
D ++ + E+ G + H R+ + +P A EYLH
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFXEPHARF-------YAAQIVLTFEYLH- 158
Query: 190 KADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
+I+RD+K N+LI ++ DF + + + + + GT Y APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VKGRTWXLCGTPEYLAPE 208
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 74/177 (41%), Gaps = 22/177 (12%)
Query: 75 IGEGSYGRVYY-GILKSGHAAAIKKLDASK----QPDEEFLAQVSMVSRLKHENFVQLLG 129
+G GS+GRV +++G+ A+K LD K + E L + ++ + V+L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 130 YCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHE 189
D ++ + E+ G + H R+ + +P A EYLH
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFXEPHARF-------YAAQIVLTFEYLH- 159
Query: 190 KADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
+I+RD+K N+LI ++ DF + + + + + GT Y APE
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VKGRTWXLCGTPEYLAPE 209
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 80/186 (43%), Gaps = 20/186 (10%)
Query: 67 ENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQPDEEFLAQVS----MVSRLKH 121
++F +IG GSY +V LK + A++ + D+E + V + + +
Sbjct: 52 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASN 111
Query: 122 ENFVQLLGYCVDGTSRVL-AYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGA 180
F+ L C SR+ E+ + G L + H ++ K L + +
Sbjct: 112 HPFLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQRQRK-------LPEEHARFYSAEI 162
Query: 181 AKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTF 240
+ L YLHE+ II+RD+K NVL+ + K+ D+ + + + ++ GT
Sbjct: 163 SLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEG--LRPGDTTSTFCGTP 217
Query: 241 GYHAPE 246
Y APE
Sbjct: 218 NYIAPE 223
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 23/181 (12%)
Query: 68 NFGTNALIGEGSYGRVY-YGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQ 126
FG L+ E + GR Y ILK K++ +K L + ++ +H F+
Sbjct: 21 TFGKVILVKEKATGRYYAMKILK-------KEVIVAKDEVAHTLTENRVLQNSRHP-FLT 72
Query: 127 LLGYCVDGTSRV-LAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLE 185
L Y R+ E+A+ G L L + V S + L+
Sbjct: 73 ALKYSFQTHDRLCFVMEYANGGELFFHLSRER---------VFSEDRARFYGAEIVSALD 123
Query: 186 YLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAP 245
YLH ++ ++++RD+K N+++ D KI DF L + A + GT Y AP
Sbjct: 124 YLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKX--FCGTPEYLAP 179
Query: 246 E 246
E
Sbjct: 180 E 180
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 84/202 (41%), Gaps = 26/202 (12%)
Query: 49 VQPIEVPAISVDELKEITENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASK---- 103
++ E P+ + +L + F +G GS+GRV K SG+ A+K LD K
Sbjct: 27 LKKWETPSQNTAQL----DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKL 82
Query: 104 QPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQ 163
+ E L + ++ + V+L D ++ + E+ + G + H R+ + ++
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSE 140
Query: 164 PGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQ 223
P A EYLH +I+RD+K N+LI ++ DF + +
Sbjct: 141 PHARF-------YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR 190
Query: 224 APDMAARLHSTRVLGTFGYHAP 245
+ + + GT Y AP
Sbjct: 191 -----VKGRTWXLCGTPEYLAP 207
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 23/181 (12%)
Query: 68 NFGTNALIGEGSYGRVY-YGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQ 126
FG L+ E + GR Y ILK K++ +K L + ++ +H F+
Sbjct: 20 TFGKVILVKEKATGRYYAMKILK-------KEVIVAKDEVAHTLTENRVLQNSRHP-FLT 71
Query: 127 LLGYCVDGTSRV-LAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLE 185
L Y R+ E+A+ G L L + V S + L+
Sbjct: 72 ALKYSFQTHDRLCFVMEYANGGELFFHLSRER---------VFSEDRARFYGAEIVSALD 122
Query: 186 YLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAP 245
YLH ++ ++++RD+K N+++ D KI DF L + A + GT Y AP
Sbjct: 123 YLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKX--FCGTPEYLAP 178
Query: 246 E 246
E
Sbjct: 179 E 179
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 86/204 (42%), Gaps = 34/204 (16%)
Query: 51 PIEVPAISVDELKEITENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQPDEEF 109
P+++P + + E+ ++ IG G++G K S A+K ++ ++ DE
Sbjct: 9 PMDLPIMHDSDRYELVKD------IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENV 62
Query: 110 LAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDIL--HGRKGVKGAQPGPV 167
++ L+H N V+ + T + E+AS G L + + GR A+
Sbjct: 63 KREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEAR---- 118
Query: 168 LSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVA---KIADFDLSNQA 224
+QQ + G+ Y H + HRD+K N L+ D A KI F S
Sbjct: 119 FFFQQLI-------SGVSYCHAM---QVCHRDLKLENTLL-DGSPAPRLKICAFGYSK-- 165
Query: 225 PDMAARLHST--RVLGTFGYHAPE 246
++ LHS +GT Y APE
Sbjct: 166 ---SSVLHSQPKSTVGTPAYIAPE 186
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 74/177 (41%), Gaps = 22/177 (12%)
Query: 75 IGEGSYGRVYYGILK-SGHAAAIKKLDASK----QPDEEFLAQVSMVSRLKHENFVQLLG 129
+G GS+GRV K +G+ A+K LD K + E L + ++ + V+L
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 130 YCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHE 189
D ++ + E+ G + H R+ + ++P A EYLH
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPHARF-------YAAQIVLTFEYLH- 159
Query: 190 KADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
+I+RD+K N+LI ++ DF + + + + + GT Y APE
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VKGRTWXLCGTPEYLAPE 209
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 74/177 (41%), Gaps = 22/177 (12%)
Query: 75 IGEGSYGRVYYGILK-SGHAAAIKKLDASK----QPDEEFLAQVSMVSRLKHENFVQLLG 129
+G GS+GRV K +G+ A+K LD K + E L + ++ + V+L
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 130 YCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHE 189
D ++ + E+ G + H R+ + ++P A EYLH
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPHARF-------YAAQIVLTFEYLH- 159
Query: 190 KADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
+I+RD+K N+LI ++ DF + + + + + GT Y APE
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VKGRTWXLCGTPEYLAPE 209
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 74/177 (41%), Gaps = 22/177 (12%)
Query: 75 IGEGSYGRVYYGILK-SGHAAAIKKLDASK----QPDEEFLAQVSMVSRLKHENFVQLLG 129
+G GS+GRV K +G+ A+K LD K + E L + ++ + V+L
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 130 YCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHE 189
D ++ + E+ G + H R+ + ++P A EYLH
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPHARF-------YAAQIVLTFEYLH- 159
Query: 190 KADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
+I+RD+K N+LI ++ DF + + + + + GT Y APE
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VKGRTWXLCGTPEYLAPE 209
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 36.6 bits (83), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 74/177 (41%), Gaps = 22/177 (12%)
Query: 75 IGEGSYGRVYYGILK-SGHAAAIKKLDASK----QPDEEFLAQVSMVSRLKHENFVQLLG 129
+G GS+GRV K +G+ A+K LD K + E L + ++ + V+L
Sbjct: 42 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 101
Query: 130 YCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHE 189
D ++ + E+ G + H R+ + ++P A EYLH
Sbjct: 102 SFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPHARF-------YAAQIVLTFEYLH- 151
Query: 190 KADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
+I+RD+K N+LI ++ DF + + + + + GT Y APE
Sbjct: 152 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VKGRTWXLCGTPEYLAPE 201
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 36.6 bits (83), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 74/177 (41%), Gaps = 22/177 (12%)
Query: 75 IGEGSYGRVYYGILK-SGHAAAIKKLDASK----QPDEEFLAQVSMVSRLKHENFVQLLG 129
+G GS+GRV K +G+ A+K LD K + E L + ++ + V+L
Sbjct: 70 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 129
Query: 130 YCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHE 189
D ++ + E+ G + H R+ + ++P A EYLH
Sbjct: 130 SFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPHARF-------YAAQIVLTFEYLH- 179
Query: 190 KADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
+I+RD+K N+LI ++ DF + + + + + GT Y APE
Sbjct: 180 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VKGRTWXLCGTPEYLAPE 229
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 74/177 (41%), Gaps = 22/177 (12%)
Query: 75 IGEGSYGRVYYGILK-SGHAAAIKKLDASK----QPDEEFLAQVSMVSRLKHENFVQLLG 129
+G GS+GRV K +G+ A+K LD K + E L + ++ + V+L
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEY 108
Query: 130 YCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHE 189
D ++ + E+ G + H R+ + ++P A EYLH
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPHARF-------YAAQIVLTFEYLH- 158
Query: 190 KADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
+I+RD+K N+LI ++ DF + + + + + GT Y APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VKGRTWXLCGTPEYLAPE 208
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 74/177 (41%), Gaps = 22/177 (12%)
Query: 75 IGEGSYGRVYYGILK-SGHAAAIKKLDASK----QPDEEFLAQVSMVSRLKHENFVQLLG 129
+G GS+GRV K +G+ A+K LD K + E L + ++ + V+L
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEY 108
Query: 130 YCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHE 189
D ++ + E+ G + H R+ + ++P A EYLH
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPHARF-------YAAQIVLTFEYLH- 158
Query: 190 KADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
+I+RD+K N+LI ++ DF + + + + + GT Y APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VKGRTWXLCGTPEYLAPE 208
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 74/177 (41%), Gaps = 22/177 (12%)
Query: 75 IGEGSYGRVYYGILK-SGHAAAIKKLDASK----QPDEEFLAQVSMVSRLKHENFVQLLG 129
+G GS+GRV K +G+ A+K LD K + E L + ++ + V+L
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEY 108
Query: 130 YCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHE 189
D ++ + E+ G + H R+ + ++P A EYLH
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPHARF-------YAAQIVLTFEYLH- 158
Query: 190 KADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
+I+RD+K N+LI ++ DF + + + + + GT Y APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VKGRTWXLCGTPEYLAPE 208
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Query: 197 HRDIKSSNVLIFDDDVAKIADFDLSNQAPD-MAARLHSTRVLGTFGYHAPE 246
HRD+K N+L+ DD A + DF +++ D +L +T +GT Y APE
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNT--VGTLYYXAPE 205
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/197 (20%), Positives = 81/197 (41%), Gaps = 40/197 (20%)
Query: 75 IGEGSYGRV--------YYGILKSGHAAAIKKLDASKQPDE---------EFLAQVSMVS 117
+ +G + ++ +Y + K + KK D +K ++ +F ++ +++
Sbjct: 39 LNQGKFNKIILCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIIT 98
Query: 118 RLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIA 177
+K+E + G + + YE+ N S+ +K + VL I
Sbjct: 99 DIKNEYCLTCEGIITNYDEVYIIYEYMENDSI---------LKFDEYFFVLDKNYTCFIP 149
Query: 178 VGAAK--------GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAA 229
+ K Y+H + +I HRD+K SN+L+ + K++DF S D
Sbjct: 150 IQVIKCIIKSVLNSFSYIHN--EKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVD--K 205
Query: 230 RLHSTRVLGTFGYHAPE 246
++ +R GT+ + PE
Sbjct: 206 KIKGSR--GTYEFMPPE 220
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 62/142 (43%), Gaps = 17/142 (11%)
Query: 74 LIGEGSYGRVYYGILK-SGHAAAIKKLDASK------QPDEEFLAQVSMVSRLKHENFVQ 126
+IG+G + V I + +G A+K +D +K E+ + S+ LKH + V+
Sbjct: 31 VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 90
Query: 127 LL-GYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLE 185
LL Y DG + +EF L + VK A G V S + L
Sbjct: 91 LLETYSSDGML-YMVFEFMDGADL-----CFEIVKRADAGFVYSEAVASHYMRQILEALR 144
Query: 186 YLHEKADPHIIHRDIKSSNVLI 207
Y H D +IIHRD+K VL+
Sbjct: 145 YCH---DNNIIHRDVKPHCVLL 163
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 11/68 (16%)
Query: 183 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQA-------PDMAARLH-ST 234
G+++LH IIHRD+K SN+++ D KI DF L+ A P++ R + +
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAP 194
Query: 235 RVLGTFGY 242
V+ GY
Sbjct: 195 EVILGMGY 202
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 86/204 (42%), Gaps = 34/204 (16%)
Query: 51 PIEVPAISVDELKEITENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQPDEEF 109
P+++P + + E+ ++ IG G++G K S A+K ++ ++ DE
Sbjct: 9 PMDLPIMHDSDRYELVKD------IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENV 62
Query: 110 LAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDIL--HGRKGVKGAQPGPV 167
++ L+H N V+ + T + E+AS G L + + GR A+
Sbjct: 63 KREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEAR---- 118
Query: 168 LSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVA---KIADFDLSNQA 224
+QQ + G+ Y H + HRD+K N L+ D A KI F S
Sbjct: 119 FFFQQLI-------SGVSYCHAM---QVCHRDLKLENTLL-DGSPAPRLKICAFGYSK-- 165
Query: 225 PDMAARLHSTR--VLGTFGYHAPE 246
++ LHS +GT Y APE
Sbjct: 166 ---SSVLHSQPKDTVGTPAYIAPE 186
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 11/68 (16%)
Query: 183 GLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQA-------PDMAARLH-ST 234
G+++LH IIHRD+K SN+++ D KI DF L+ A P++ R + +
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAP 194
Query: 235 RVLGTFGY 242
V+ GY
Sbjct: 195 EVILGMGY 202
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 36.2 bits (82), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 76/175 (43%), Gaps = 24/175 (13%)
Query: 64 EITENFGTNALIGEGSYGRVYYGI--LKSG--HAAAIKKLDASKQPDEEFLAQVSMVSRL 119
+++ F IGEG++ VY L+ G A+K L + P A++ ++
Sbjct: 18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIR-IAAELQCLTVA 76
Query: 120 KHENFVQLLGYCVDGTSRV-LAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAV 178
++ V + YC V +A + + S DIL+ LS+Q+ + +
Sbjct: 77 GGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDILNS------------LSFQEVREYML 124
Query: 179 GAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIA--DFDLSNQAPDMAARL 231
K L+ +H+ I+HRD+K SN L ++ + K A DF L+ D L
Sbjct: 125 NLFKALKRIHQFG---IVHRDVKPSNFL-YNRRLKKYALVDFGLAQGTHDTKIEL 175
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 36.2 bits (82), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 75/180 (41%), Gaps = 26/180 (14%)
Query: 75 IGEGSYGRVYYGILKSGHAA---AIKKLDASKQPDEE----FLAQVSMVSRLKHENFVQL 127
IG+GS+G+V I++ A+K ++ K + ++ ++ L+H V L
Sbjct: 23 IGKGSFGKV--CIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNL 80
Query: 128 LGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGA-AKGLEY 186
D + + G L H ++ V + + VK+ + L+Y
Sbjct: 81 WYSFQDEEDMFMVVDLLLGGDLR--YHLQQNVHFKE--------ETVKLFICELVMALDY 130
Query: 187 LHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
L + IIHRD+K N+L+ + I DF+++ P T + GT Y APE
Sbjct: 131 LQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLP---RETQITTMAGTKPYMAPE 184
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 36.2 bits (82), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 84/190 (44%), Gaps = 23/190 (12%)
Query: 65 ITENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQP--DEEFLAQVSMVSRL-K 120
+T+ + IG+G++ V + L +GH A K ++ K D + L + + + RL K
Sbjct: 2 MTDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLK 61
Query: 121 HENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGA 180
H N V+L + L ++ + G L + + R+ A + QQ ++ +
Sbjct: 62 HSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCI--QQILEAVL-- 117
Query: 181 AKGLEYLHEKADPHIIHRDIKSSNVLIFDD---DVAKIADFDLSNQAP-DMAARLHSTRV 236
+ H+ ++HRD+K N+L+ K+ADF L+ + D A
Sbjct: 118 -----HCHQMG---VVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFA-- 167
Query: 237 LGTFGYHAPE 246
GT GY +PE
Sbjct: 168 -GTPGYLSPE 176
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 35.8 bits (81), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 76/181 (41%), Gaps = 21/181 (11%)
Query: 49 VQPIEVPAISVDELKEITENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASK---- 103
++ E P+ + +L + F +G GS+GRV K SG+ A+K LD K
Sbjct: 27 LKKWETPSQNTAQL----DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKL 82
Query: 104 QPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQ 163
+ E L + ++ + V+L D ++ + E+ + G + H R+ + ++
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSE 140
Query: 164 PGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQ 223
P A EYLH +I+RD+K N+LI ++ DF + +
Sbjct: 141 PHARF-------YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR 190
Query: 224 A 224
Sbjct: 191 V 191
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 35.8 bits (81), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 73/177 (41%), Gaps = 22/177 (12%)
Query: 75 IGEGSYGRVYYGILK-SGHAAAIKKLDASK----QPDEEFLAQVSMVSRLKHENFVQLLG 129
+G GS+GRV K +G+ A+K LD K + E L + ++ + V+L
Sbjct: 42 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 101
Query: 130 YCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHE 189
D ++ + E+ G + H R+ + +P A EYLH
Sbjct: 102 SFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFXEPHARF-------YAAQIVLTFEYLH- 151
Query: 190 KADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
+I+RD+K N+LI ++ DF + + + + + GT Y APE
Sbjct: 152 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VKGRTWXLCGTPEYLAPE 201
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 35.8 bits (81), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 62/142 (43%), Gaps = 17/142 (11%)
Query: 74 LIGEGSYGRVYYGILK-SGHAAAIKKLDASK------QPDEEFLAQVSMVSRLKHENFVQ 126
+IG+G + V I + +G A+K +D +K E+ + S+ LKH + V+
Sbjct: 33 VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 92
Query: 127 LL-GYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLE 185
LL Y DG + +EF L + VK A G V S + L
Sbjct: 93 LLETYSSDGML-YMVFEFMDGADL-----CFEIVKRADAGFVYSEAVASHYMRQILEALR 146
Query: 186 YLHEKADPHIIHRDIKSSNVLI 207
Y H D +IIHRD+K VL+
Sbjct: 147 YCH---DNNIIHRDVKPHCVLL 165
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 35.4 bits (80), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 69/155 (44%), Gaps = 22/155 (14%)
Query: 74 LIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQP---DEEFLAQVSMVSRLK-HENFVQLL 128
++GEG++ RV I L + A+K ++ KQP +V M+ + + H N ++L+
Sbjct: 20 VLGEGAHARVQTCINLITSQEYAVKIIE--KQPGHIRSRVFREVEMLYQCQGHRNVLELI 77
Query: 129 GYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLH 188
+ + L +E GS+ +H R+ + V+ A L++LH
Sbjct: 78 EFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQ---------DVASALDFLH 128
Query: 189 EKADPHIIHRDIKSSNVLIFDDD---VAKIADFDL 220
K I HRD+K N+L + KI DF L
Sbjct: 129 NKG---IAHRDLKPENILCEHPNQVSPVKICDFGL 160
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 35.0 bits (79), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 82/211 (38%), Gaps = 49/211 (23%)
Query: 32 GAYHASEAAPKGAQAVKVQPIEVPAISVDELK------EITENFGTNA-LIGEGSYGRVY 84
G++ S A G VK+ P++ P + L E E TN +IG GS+G V+
Sbjct: 1 GSFTMSNAPLNG---VKLNPLDDPNKVIKVLASDGKTGEQREIAYTNCKVIGNGSFGVVF 57
Query: 85 YGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFA 144
L AIKK+ K+ L + +V KH N V L + F
Sbjct: 58 QAKLVESDEVAIKKVLQDKRFKNRELQIMRIV---KHPNVVDLKAF------------FY 102
Query: 145 SNGSLHDILH---------------GRKGVKGAQPGPVLSWQQRVKIAV-GAAKGLEYLH 188
SNG D + R K Q P+L +K+ + + L Y+H
Sbjct: 103 SNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLL----IKLYMYQLLRSLAYIH 158
Query: 189 EKADPHIIHRDIKSSNVLIFDDD-VAKIADF 218
I HRDIK N+L+ V K+ DF
Sbjct: 159 SIG---ICHRDIKPQNLLLDPPSGVLKLIDF 186
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 35.0 bits (79), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 85/193 (44%), Gaps = 26/193 (13%)
Query: 67 ENFG-----TNALIGEGSYGRVYYGILKS-GHAAAIKKLDASKQPDE---EFLAQVSMVS 117
ENF T+ +G G + V I KS G A K L ++ + E L +++++
Sbjct: 24 ENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLE 83
Query: 118 RLKHENFVQLLGYCVDGTSRV-LAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKI 176
K V L + TS + L E+A+ G + + + ++S +++
Sbjct: 84 LAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCL-------PELAEMVSENDVIRL 136
Query: 177 AVGAAKGLEYLHEKADPHIIHRDIKSSNVL---IFDDDVAKIADFDLSNQAPDMAARLHS 233
+G+ YLH+ +I+H D+K N+L I+ KI DF +S + A L
Sbjct: 137 IKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKI-GHACELR- 191
Query: 234 TRVLGTFGYHAPE 246
++GT Y APE
Sbjct: 192 -EIMGTPEYLAPE 203
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 34.7 bits (78), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 64/146 (43%), Gaps = 23/146 (15%)
Query: 75 IGEGSYGRVYYGI-LKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKH--------ENFV 125
+G G + V+ ++ A+K + +++ E L ++ ++ +++ E V
Sbjct: 29 LGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVV 88
Query: 126 QLLG----YCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAA 181
QLL V+GT + +E + L I+ K P P + KI
Sbjct: 89 QLLDDFKISGVNGTHICMVFEVLGHHLLKWII---KSNYQGLPLPCVK-----KIIQQVL 140
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLI 207
+GL+YLH K IIH DIK N+L+
Sbjct: 141 QGLDYLHTKC--RIIHTDIKPENILL 164
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 34.7 bits (78), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 64/146 (43%), Gaps = 23/146 (15%)
Query: 75 IGEGSYGRVYYGI-LKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKH--------ENFV 125
+G G + V+ ++ A+K + +++ E L ++ ++ +++ E V
Sbjct: 45 LGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVV 104
Query: 126 QLLG----YCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAA 181
QLL V+GT + +E + L I+ K P P + KI
Sbjct: 105 QLLDDFKISGVNGTHICMVFEVLGHHLLKWII---KSNYQGLPLPCVK-----KIIQQVL 156
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLI 207
+GL+YLH K IIH DIK N+L+
Sbjct: 157 QGLDYLHTKC--RIIHTDIKPENILL 180
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 34.7 bits (78), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 74/176 (42%), Gaps = 22/176 (12%)
Query: 64 EITENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHE 122
+ F IG GS+G +Y G +++ AI KL+ K + L + + L+
Sbjct: 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAI-KLENVKTKHPQLLYESKIYRILQGG 62
Query: 123 NFV-QLLGYCVDGTSRVLAYEFASNGSLHDILH--GRKGVKGAQPGPVLSWQQRVKIAVG 179
+ + + V+G VL + SL D+ + RK LS + + +A
Sbjct: 63 TGIPNVRWFGVEGDYNVLVMDLL-GPSLEDLFNFCSRK----------LSLKTVLMLADQ 111
Query: 180 AAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAK---IADFDLSNQAPDMAARLH 232
+E++H K+ +HRDIK N L+ A I DF L+ + D + H
Sbjct: 112 MINRVEFVHSKS---FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQH 164
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 34.3 bits (77), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 72/165 (43%), Gaps = 24/165 (14%)
Query: 75 IGEGSYGRVYYGI-LKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYC-V 132
IG GS+G +Y G + +G AI KL+ K + + + ++ + + +C
Sbjct: 17 IGSGSFGDIYLGTDIAAGEEVAI-KLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGA 75
Query: 133 DGTSRVLAYEFASNGSLHDILH--GRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEK 190
+G V+ E SL D+ + RK S + + +A +EY+H K
Sbjct: 76 EGDYNVMVMELLG-PSLEDLFNFCSRK----------FSLKTVLLLADQMISRIEYIHSK 124
Query: 191 ADPHIIHRDIKSSNVLI---FDDDVAKIADFDLSNQAPDMAARLH 232
+ IHRD+K N L+ ++ I DF L+ + D AR H
Sbjct: 125 ---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD--ARTH 164
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 33.9 bits (76), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 71/165 (43%), Gaps = 24/165 (14%)
Query: 75 IGEGSYGRVYYGI-LKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYC-V 132
IG GS+G +Y G + SG AI KL+ K + + ++ + + +C
Sbjct: 17 IGSGSFGDIYLGANIASGEEVAI-KLECVKTKHPQLHIESKFYKMMQGGVGIPSIKWCGA 75
Query: 133 DGTSRVLAYEFASNGSLHDILH--GRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEK 190
+G V+ E SL D+ + RK S + + +A +EY+H K
Sbjct: 76 EGDYNVMVMELLG-PSLEDLFNFCSRK----------FSLKTVLLLADQMISRIEYIHSK 124
Query: 191 ADPHIIHRDIKSSNVLI---FDDDVAKIADFDLSNQAPDMAARLH 232
+ IHRD+K N L+ ++ I DF L+ + D AR H
Sbjct: 125 ---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD--ARTH 164
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 33.9 bits (76), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 85/204 (41%), Gaps = 34/204 (16%)
Query: 51 PIEVPAISVDELKEITENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQPDEEF 109
P+++P + + E+ ++ IG G++G K S A+K ++ ++
Sbjct: 9 PMDLPIMHDSDRYELVKD------IGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANV 62
Query: 110 LAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDIL--HGRKGVKGAQPGPV 167
++ L+H N V+ + T + E+AS G L + + GR A+
Sbjct: 63 KREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEAR---- 118
Query: 168 LSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVA---KIADFDLSNQA 224
+QQ + G+ Y H + HRD+K N L+ D A KI DF S
Sbjct: 119 FFFQQLI-------SGVSYCHAM---QVCHRDLKLENTLL-DGSPAPRLKICDFGYSK-- 165
Query: 225 PDMAARLHS--TRVLGTFGYHAPE 246
++ LHS +GT Y APE
Sbjct: 166 ---SSVLHSQPKSTVGTPAYIAPE 186
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 33.9 bits (76), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 72/165 (43%), Gaps = 24/165 (14%)
Query: 75 IGEGSYGRVYYGI-LKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYC-V 132
IG GS+G +Y G + +G AI KL+ K + + + ++ + + +C
Sbjct: 15 IGSGSFGDIYLGTDIAAGEEVAI-KLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGA 73
Query: 133 DGTSRVLAYEFASNGSLHDILH--GRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEK 190
+G V+ E SL D+ + RK S + + +A +EY+H K
Sbjct: 74 EGDYNVMVMELLG-PSLEDLFNFCSRK----------FSLKTVLLLADQMISRIEYIHSK 122
Query: 191 ADPHIIHRDIKSSNVLI---FDDDVAKIADFDLSNQAPDMAARLH 232
+ IHRD+K N L+ ++ I DF L+ + D AR H
Sbjct: 123 ---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD--ARTH 162
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 33.9 bits (76), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 80/198 (40%), Gaps = 27/198 (13%)
Query: 59 VDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSR 118
V E++ E+F +IG G++G V A +K + + + L + M+ R
Sbjct: 82 VKEMQLHREDFEIIKVIGRGAFGEV----------AVVKMKNTERIYAMKILNKWEMLKR 131
Query: 119 LKHENFVQLLGYCVDGTSR---VLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVK 175
+ F + V+G + L Y F L+ ++ G G +L+ + +
Sbjct: 132 AETACFREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVG------GDLLTLLSKFE 185
Query: 176 IAVGAAKGLEYLHEKA-------DPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMA 228
+ Y+ E H +HRDIK NVL+ + ++ADF + D
Sbjct: 186 DKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMND-D 244
Query: 229 ARLHSTRVLGTFGYHAPE 246
+ S+ +GT Y +PE
Sbjct: 245 GTVQSSVAVGTPDYISPE 262
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 80/198 (40%), Gaps = 27/198 (13%)
Query: 59 VDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSR 118
V E++ E+F +IG G++G V A +K + + + L + M+ R
Sbjct: 66 VKEMQLHREDFEIIKVIGRGAFGEV----------AVVKMKNTERIYAMKILNKWEMLKR 115
Query: 119 LKHENFVQLLGYCVDGTSR---VLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVK 175
+ F + V+G + L Y F L+ ++ G G +L+ + +
Sbjct: 116 AETACFREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVG------GDLLTLLSKFE 169
Query: 176 IAVGAAKGLEYLHEKA-------DPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMA 228
+ Y+ E H +HRDIK NVL+ + ++ADF + D
Sbjct: 170 DKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMND-D 228
Query: 229 ARLHSTRVLGTFGYHAPE 246
+ S+ +GT Y +PE
Sbjct: 229 GTVQSSVAVGTPDYISPE 246
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 74/190 (38%), Gaps = 19/190 (10%)
Query: 62 LKEITENFGTNALIGEGSYGRVYYGILKSGHAA----AIKKLDASKQPDEEFLAQVSMVS 117
L+ E++ +IG G++G V K+ + K + K+ D F + +
Sbjct: 70 LQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIM 129
Query: 118 RLKHENFV-QLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKI 176
+ +V QL D + E+ G L +++ + W +
Sbjct: 130 AFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPE--------KWAKFYTA 181
Query: 177 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRV 236
V A L+ +H +IHRD+K N+L+ K+ADF + D +H
Sbjct: 182 EVVLA--LDAIHSMG---LIHRDVKPDNMLLDKHGHLKLADFGTCMKM-DETGMVHCDTA 235
Query: 237 LGTFGYHAPE 246
+GT Y +PE
Sbjct: 236 VGTPDYISPE 245
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 33.1 bits (74), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 70/153 (45%), Gaps = 25/153 (16%)
Query: 66 TENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQP------DEEFLAQVSMVSR 118
T F IG G +G V+ + + G AIK+ SK+P ++ L +V +
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKR---SKKPLAGSVDEQNALREVYAHAV 64
Query: 119 L-KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIA 177
L +H + V+ + ++ E+ + GSL D + ++ ++S+ + ++
Sbjct: 65 LGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI--------SENYRIMSYFKEAELK 116
Query: 178 ---VGAAKGLEYLHEKADPHIIHRDIKSSNVLI 207
+ +GL Y+H + ++H DIK SN+ I
Sbjct: 117 DLLLQVGRGLRYIHSMS---LVHMDIKPSNIFI 146
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 33.1 bits (74), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 70/153 (45%), Gaps = 25/153 (16%)
Query: 66 TENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQP------DEEFLAQVSMVSR 118
T F IG G +G V+ + + G AIK+ SK+P ++ L +V +
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKR---SKKPLAGSVDEQNALREVYAHAV 64
Query: 119 L-KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIA 177
L +H + V+ + ++ E+ + GSL D + ++ ++S+ + ++
Sbjct: 65 LGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI--------SENYRIMSYFKEAELK 116
Query: 178 ---VGAAKGLEYLHEKADPHIIHRDIKSSNVLI 207
+ +GL Y+H + ++H DIK SN+ I
Sbjct: 117 DLLLQVGRGLRYIHSMS---LVHMDIKPSNIFI 146
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 70/153 (45%), Gaps = 25/153 (16%)
Query: 66 TENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQP------DEEFLAQVSMVSR 118
T F IG G +G V+ + + G AIK+ SK+P ++ L +V +
Sbjct: 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKR---SKKPLAGSVDEQNALREVYAHAV 66
Query: 119 L-KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIA 177
L +H + V+ + ++ E+ + GSL D + ++ ++S+ + ++
Sbjct: 67 LGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI--------SENYRIMSYFKEAELK 118
Query: 178 ---VGAAKGLEYLHEKADPHIIHRDIKSSNVLI 207
+ +GL Y+H + ++H DIK SN+ I
Sbjct: 119 DLLLQVGRGLRYIHSMS---LVHMDIKPSNIFI 148
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 32.7 bits (73), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 70/153 (45%), Gaps = 25/153 (16%)
Query: 66 TENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQP------DEEFLAQVSMVSR 118
T F IG G +G V+ + + G AIK+ SK+P ++ L +V +
Sbjct: 6 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKR---SKKPLAGSVDEQNALREVYAHAV 62
Query: 119 L-KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIA 177
L +H + V+ + ++ E+ + GSL D + ++ ++S+ + ++
Sbjct: 63 LGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI--------SENYRIMSYFKEAELK 114
Query: 178 ---VGAAKGLEYLHEKADPHIIHRDIKSSNVLI 207
+ +GL Y+H + ++H DIK SN+ I
Sbjct: 115 DLLLQVGRGLRYIHSMS---LVHMDIKPSNIFI 144
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 32.7 bits (73), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 20/30 (66%), Gaps = 2/30 (6%)
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLIFDDD 211
+GL+YLH K IIH DIK N+L+ DD
Sbjct: 151 QGLDYLHSKCK--IIHTDIKPENILMCVDD 178
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 32.7 bits (73), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 72/177 (40%), Gaps = 21/177 (11%)
Query: 75 IGEGSYGRVYYGI-LKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLK-HENFVQLLGYCV 132
+GEGS+ + KS A A+K + SK+ + +++ + + H N V+L
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKII--SKRMEANTQKEITALKLCEGHPNIVKLHEVFH 76
Query: 133 DGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKAD 192
D L E + G L + + +K + ++ + ++H D
Sbjct: 77 DQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMR---------KLVSAVSHMH---D 124
Query: 193 PHIIHRDIKSSNVLIFDDD---VAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 246
++HRD+K N+L D++ KI DF + P L + T Y APE
Sbjct: 125 VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTP--CFTLHYAAPE 179
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 31.2 bits (69), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 82/190 (43%), Gaps = 23/190 (12%)
Query: 65 ITENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQP--DEEFLAQVSMVSRL-K 120
+T+ + +G+G++ V + + +G A K ++ K D + L + + + RL K
Sbjct: 2 MTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLK 61
Query: 121 HENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGA 180
H N V+L + L ++ + G L + + R+ A + Q++
Sbjct: 62 HPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCI---QQI------ 112
Query: 181 AKGLEYLHEKADPHIIHRDIKSSNVLIFDDD---VAKIADFDLSNQAP-DMAARLHSTRV 236
LE ++ I+HRD+K N+L+ K+ADF L+ + D A
Sbjct: 113 ---LESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFA-- 167
Query: 237 LGTFGYHAPE 246
GT GY +PE
Sbjct: 168 -GTPGYLSPE 176
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 31.2 bits (69), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 80/193 (41%), Gaps = 27/193 (13%)
Query: 64 EITENFGTNALIGEGSYGRVYYGILKSG---HAAAI---KKLDASKQPDEEFLAQVSMVS 117
T+++ +G+G++ V + K+ +AA I KKL A D + L + + +
Sbjct: 28 RFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSAR---DHQKLEREARIC 84
Query: 118 RL-KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKI 176
RL KH N V+L + L ++ + G L + + R+ A +
Sbjct: 85 RLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIH------- 137
Query: 177 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDD---DVAKIADFDLSNQAPDMAARLHS 233
+ LE ++ I+HRD+K N+L+ K+ADF L+ +
Sbjct: 138 -----QILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFG 192
Query: 234 TRVLGTFGYHAPE 246
GT GY +PE
Sbjct: 193 --FAGTPGYLSPE 203
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 31.2 bits (69), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 82/190 (43%), Gaps = 23/190 (12%)
Query: 65 ITENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQP--DEEFLAQVSMVSRL-K 120
+T+ + +G+G++ V + + +G A K ++ K D + L + + + RL K
Sbjct: 2 MTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLK 61
Query: 121 HENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGA 180
H N V+L + L ++ + G L + + R+ A + Q++
Sbjct: 62 HPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCI---QQI------ 112
Query: 181 AKGLEYLHEKADPHIIHRDIKSSNVLIFDDD---VAKIADFDLSNQAP-DMAARLHSTRV 236
LE ++ I+HRD+K N+L+ K+ADF L+ + D A
Sbjct: 113 ---LESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFG---F 166
Query: 237 LGTFGYHAPE 246
GT GY +PE
Sbjct: 167 AGTPGYLSPE 176
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 30.8 bits (68), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 83/201 (41%), Gaps = 42/201 (20%)
Query: 71 TNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEF----LAQVSMVSRLK-HENFV 125
+ ++G GS G V + G A+K++ +F L ++ +++ H N +
Sbjct: 37 SEKILGYGSSGTVVFQGSFQGRPVAVKRMLI------DFCDIALMEIKLLTESDDHPNVI 90
Query: 126 QLLGYCVDGTSRVL--AYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQR---VKIAVGA 180
+ YC + T R L A E N +L D++ K V L Q+ + +
Sbjct: 91 RY--YCSETTDRFLYIALELC-NLNLQDLVES-KNVSDEN----LKLQKEYNPISLLRQI 142
Query: 181 AKGLEYLHEKADPHIIHRDIKSSNVLI-----FDDDVAK--------IADFDLSNQ--AP 225
A G+ +LH IIHRD+K N+L+ F D I+DF L + +
Sbjct: 143 ASGVAHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSG 199
Query: 226 DMAARLHSTRVLGTFGYHAPE 246
R + GT G+ APE
Sbjct: 200 QXXFRXNLNNPSGTSGWRAPE 220
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 30.8 bits (68), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 84/201 (41%), Gaps = 42/201 (20%)
Query: 71 TNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEF----LAQVSMVSRLK-HENFV 125
+ ++G GS G V + G A+K++ +F L ++ +++ H N +
Sbjct: 19 SEKILGYGSSGTVVFQGSFQGRPVAVKRMLI------DFCDIALMEIKLLTESDDHPNVI 72
Query: 126 QLLGYCVDGTSRVL--AYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQR---VKIAVGA 180
+ YC + T R L A E N +L D++ K V L Q+ + +
Sbjct: 73 RY--YCSETTDRFLYIALELC-NLNLQDLVES-KNVSDEN----LKLQKEYNPISLLRQI 124
Query: 181 AKGLEYLHEKADPHIIHRDIKSSNVLI-----FDDDVAK--------IADFDLSNQ--AP 225
A G+ +LH IIHRD+K N+L+ F D I+DF L + +
Sbjct: 125 ASGVAHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSG 181
Query: 226 DMAARLHSTRVLGTFGYHAPE 246
+ R + GT G+ APE
Sbjct: 182 QSSFRTNLNNPSGTSGWRAPE 202
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 30.8 bits (68), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 83/201 (41%), Gaps = 42/201 (20%)
Query: 71 TNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEF----LAQVSMVSRLK-HENFV 125
+ ++G GS G V + G A+K++ +F L ++ +++ H N +
Sbjct: 37 SEKILGYGSSGTVVFQGSFQGRPVAVKRMLI------DFCDIALMEIKLLTESDDHPNVI 90
Query: 126 QLLGYCVDGTSRVL--AYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQR---VKIAVGA 180
+ YC + T R L A E N +L D++ K V L Q+ + +
Sbjct: 91 RY--YCSETTDRFLYIALELC-NLNLQDLVES-KNVSDEN----LKLQKEYNPISLLRQI 142
Query: 181 AKGLEYLHEKADPHIIHRDIKSSNVLI-----FDDDVAK--------IADFDLSNQ--AP 225
A G+ +LH IIHRD+K N+L+ F D I+DF L + +
Sbjct: 143 ASGVAHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSG 199
Query: 226 DMAARLHSTRVLGTFGYHAPE 246
R + GT G+ APE
Sbjct: 200 QXXFRXNLNNPSGTSGWRAPE 220
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 30.8 bits (68), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 83/201 (41%), Gaps = 42/201 (20%)
Query: 71 TNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEF----LAQVSMVSRLK-HENFV 125
+ ++G GS G V + G A+K++ +F L ++ +++ H N +
Sbjct: 19 SEKILGYGSSGTVVFQGSFQGRPVAVKRMLI------DFCDIALMEIKLLTESDDHPNVI 72
Query: 126 QLLGYCVDGTSRVL--AYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQR---VKIAVGA 180
+ YC + T R L A E N +L D++ K V L Q+ + +
Sbjct: 73 RY--YCSETTDRFLYIALELC-NLNLQDLVES-KNVSDEN----LKLQKEYNPISLLRQI 124
Query: 181 AKGLEYLHEKADPHIIHRDIKSSNVLI-----FDDDVAK--------IADFDLSNQ--AP 225
A G+ +LH IIHRD+K N+L+ F D I+DF L + +
Sbjct: 125 ASGVAHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSG 181
Query: 226 DMAARLHSTRVLGTFGYHAPE 246
R + GT G+ APE
Sbjct: 182 QXXFRXNLNNPSGTSGWRAPE 202
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 30.4 bits (67), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 15/82 (18%)
Query: 174 VKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDV-----AKIADFDLSNQAPDMA 228
+ + GL +LH +I+HRD+K N+LI + A I+DF L + +A
Sbjct: 121 ITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKK---LA 174
Query: 229 ARLHS----TRVLGTFGYHAPE 246
HS + V GT G+ APE
Sbjct: 175 VGRHSFSRRSGVPGTEGWIAPE 196
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 34/68 (50%), Gaps = 9/68 (13%)
Query: 183 GLEYLHEKADPHIIHRDIKSSNVL--IFD--DDVAKIADFDLSNQAPDMAARLHSTRVLG 238
GL+Y+H + IIH DIK NVL I D +++ +I DL N H T +
Sbjct: 143 GLDYMHRRCG--IIHTDIKPENVLMEIVDSPENLIQIKIADLGNAC---WYDEHYTNSIQ 197
Query: 239 TFGYHAPE 246
T Y +PE
Sbjct: 198 TREYRSPE 205
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 34/68 (50%), Gaps = 9/68 (13%)
Query: 183 GLEYLHEKADPHIIHRDIKSSNVL--IFD--DDVAKIADFDLSNQAPDMAARLHSTRVLG 238
GL+Y+H + IIH DIK NVL I D +++ +I DL N H T +
Sbjct: 143 GLDYMHRRCG--IIHTDIKPENVLMEIVDSPENLIQIKIADLGNAC---WYDEHYTNSIQ 197
Query: 239 TFGYHAPE 246
T Y +PE
Sbjct: 198 TREYRSPE 205
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 29.3 bits (64), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 74/193 (38%), Gaps = 19/193 (9%)
Query: 59 VDELKEITENFGTNALIGEGSYGRVYYGILKSGHAA----AIKKLDASKQPDEEFLAQVS 114
+ +L+ E++ +IG G++G V KS + K + K+ D F +
Sbjct: 66 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEER 125
Query: 115 MVSRLKHENFVQLLGYCV-DGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQR 173
+ + +V L Y D + E+ G L +++ + W +
Sbjct: 126 DIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPE--------KWARF 177
Query: 174 VKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHS 233
V A L+ +H IHRD+K N+L+ K+ADF + + +
Sbjct: 178 YTAEVVLA--LDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKM-NKEGMVRC 231
Query: 234 TRVLGTFGYHAPE 246
+GT Y +PE
Sbjct: 232 DTAVGTPDYISPE 244
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 29.3 bits (64), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 74/193 (38%), Gaps = 19/193 (9%)
Query: 59 VDELKEITENFGTNALIGEGSYGRVYYGILKSGHAA----AIKKLDASKQPDEEFLAQVS 114
+ +L+ E++ +IG G++G V KS + K + K+ D F +
Sbjct: 61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEER 120
Query: 115 MVSRLKHENFVQLLGYCV-DGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQR 173
+ + +V L Y D + E+ G L +++ + W +
Sbjct: 121 DIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPE--------KWARF 172
Query: 174 VKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHS 233
V A L+ +H IHRD+K N+L+ K+ADF + + +
Sbjct: 173 YTAEVVLA--LDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKM-NKEGMVRC 226
Query: 234 TRVLGTFGYHAPE 246
+GT Y +PE
Sbjct: 227 DTAVGTPDYISPE 239
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 74/193 (38%), Gaps = 19/193 (9%)
Query: 59 VDELKEITENFGTNALIGEGSYGRVYYGILKSGHAA----AIKKLDASKQPDEEFLAQVS 114
+ +L+ E++ +IG G++G V KS + K + K+ D F +
Sbjct: 66 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEER 125
Query: 115 MVSRLKHENFVQLLGYCV-DGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQR 173
+ + +V L Y D + E+ G L +++ + W +
Sbjct: 126 DIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPE--------KWARF 177
Query: 174 VKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHS 233
V A L+ +H IHRD+K N+L+ K+ADF + + +
Sbjct: 178 YTAEVVLA--LDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKM-NKEGMVRC 231
Query: 234 TRVLGTFGYHAPE 246
+GT Y +PE
Sbjct: 232 DTAVGTPDYISPE 244
>pdb|3E7E|A Chain A, Structure And Substrate Recruitment Of The Human Spindle
Checkpoint Kinase Bub
Length = 365
Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 59/141 (41%), Gaps = 14/141 (9%)
Query: 74 LIGEGSYGRVYYGILKSGHAAAIKK---LDASKQPDE-EFLAQVSMVSRLK---HENFVQ 126
L+GEG++ +VY + A K+ L K + EF ++ RLK F++
Sbjct: 72 LLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQLMERLKPSMQHMFMK 131
Query: 127 LLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEY 186
+ VL E S G+L + ++ K P V+ + A+ +E
Sbjct: 132 FYSAHLFQNGSVLVGELYSYGTLLNAINLYKNT----PEKVMPQGLVISFAMRMLYMIEQ 187
Query: 187 LHEKADPHIIHRDIKSSNVLI 207
+H D IIH DIK N ++
Sbjct: 188 VH---DCEIIHGDIKPDNFIL 205
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 29.3 bits (64), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 82/194 (42%), Gaps = 27/194 (13%)
Query: 66 TENFGTNAL------IGEGSYGRVYYGI-LKSGHAAAIKKLDASKQP--DEEFLAQVSMV 116
TEN ++ +G+G++ V + + +G A K ++ K D + L + + +
Sbjct: 15 TENLYFQSMYQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARI 74
Query: 117 SRL-KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVK 175
RL KH N V+L + L ++ + G L + + R+ A + QQ ++
Sbjct: 75 CRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCI--QQILE 132
Query: 176 IAVGAAKGLEYLHEKADPHIIHRDIKSSNVLI---FDDDVAKIADFDLSNQAPDMAARLH 232
+ + H+ ++HRD+K N+L+ K+ADF L+ +
Sbjct: 133 AVL-------HCHQMG---VVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWF 182
Query: 233 STRVLGTFGYHAPE 246
GT GY +PE
Sbjct: 183 G--FAGTPGYLSPE 194
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 29.3 bits (64), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 76/192 (39%), Gaps = 25/192 (13%)
Query: 40 APKGAQAVKVQPIEVPAISVDELKEITEN-FGTNALIGEGSYGRVYYGILKSGH-AAAIK 97
P+G+ + ++ + KE E+ + L+G G +G VY GI S + AIK
Sbjct: 15 VPRGSHMAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK 74
Query: 98 KLDASKQPDEEFL---AQVSM-VSRLK-----HENFVQLLGYCVDGTSRVLAYEFASN-G 147
++ + D L +V M V LK ++LL + S VL E
Sbjct: 75 HVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQ 134
Query: 148 SLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLI 207
L D + R G + WQ LE + + ++HRDIK N+LI
Sbjct: 135 DLFDFITER-GALQEELARSFFWQV-----------LEAVRHCHNCGVLHRDIKDENILI 182
Query: 208 -FDDDVAKIADF 218
+ K+ DF
Sbjct: 183 DLNRGELKLIDF 194
>pdb|3SWR|A Chain A, Structure Of Human Dnmt1 (601-1600) In Complex With
Sinefungin
Length = 1002
Score = 28.9 bits (63), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 35/83 (42%), Gaps = 4/83 (4%)
Query: 77 EGSYGRVYYGILKSGHAAAIKKLDASKQPDEE----FLAQVSMVSRLKHENFVQLLGYCV 132
EG G+ Y+ L A + QP E+ F + ++ ++ + ++L
Sbjct: 258 EGDDGKTYFYQLWYDQDYARFESPPKTQPTEDNKFKFCVSCARLAEMRQKEIPRVLEQLE 317
Query: 133 DGTSRVLAYEFASNGSLHDILHG 155
D SRVL Y NG L+ + G
Sbjct: 318 DLDSRVLYYSATKNGILYRVGDG 340
>pdb|1PWE|A Chain A, Rat Liver L-Serine Dehydratase Apo Enzyme
pdb|1PWE|B Chain B, Rat Liver L-Serine Dehydratase Apo Enzyme
pdb|1PWE|C Chain C, Rat Liver L-Serine Dehydratase Apo Enzyme
pdb|1PWE|D Chain D, Rat Liver L-Serine Dehydratase Apo Enzyme
pdb|1PWE|E Chain E, Rat Liver L-Serine Dehydratase Apo Enzyme
pdb|1PWE|F Chain F, Rat Liver L-Serine Dehydratase Apo Enzyme
pdb|1PWH|A Chain A, Rat Liver L-Serine Dehydratase- Complex With Pyridoxyl-(O-
Methyl-Serine)-5-Monophosphate
pdb|1PWH|B Chain B, Rat Liver L-Serine Dehydratase- Complex With Pyridoxyl-(O-
Methyl-Serine)-5-Monophosphate
pdb|1PWH|C Chain C, Rat Liver L-Serine Dehydratase- Complex With Pyridoxyl-(O-
Methyl-Serine)-5-Monophosphate
pdb|1PWH|D Chain D, Rat Liver L-Serine Dehydratase- Complex With Pyridoxyl-(O-
Methyl-Serine)-5-Monophosphate
Length = 327
Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 23/48 (47%)
Query: 16 ADNGNAYMVKSSAGTDGAYHASEAAPKGAQAVKVQPIEVPAISVDELK 63
A G + V SSAG G A A G A V P PA++++ LK
Sbjct: 53 AKQGCKHFVCSSAGNAGMATAYAARRLGLPATIVVPSTTPALTIERLK 100
>pdb|3PTA|A Chain A, Crystal Structure Of Human Dnmt1(646-1600) In Complex With
Dna
Length = 956
Score = 28.5 bits (62), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 35/83 (42%), Gaps = 4/83 (4%)
Query: 77 EGSYGRVYYGILKSGHAAAIKKLDASKQPDEE----FLAQVSMVSRLKHENFVQLLGYCV 132
EG G+ Y+ L A + QP E+ F + ++ ++ + ++L
Sbjct: 212 EGDDGKTYFYQLWYDQDYARFESPPKTQPTEDNKFKFCVSCARLAEMRQKEIPRVLEQLE 271
Query: 133 DGTSRVLAYEFASNGSLHDILHG 155
D SRVL Y NG L+ + G
Sbjct: 272 DLDSRVLYYSATKNGILYRVGDG 294
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 28.5 bits (62), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Query: 177 AVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRV 236
A A L YLH +I++RD+K N+L+ + DF L + ++ ++
Sbjct: 145 AAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKE--NIEHNSTTSTF 199
Query: 237 LGTFGYHAPE 246
GT Y APE
Sbjct: 200 CGTPEYLAPE 209
>pdb|2O7R|A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With
Acyl Adduct
pdb|2O7V|A Chain A, Carboxylesterase Aecxe1 From Actinidia Eriantha Covalently
Inhibited By Paraoxon
Length = 338
Score = 28.1 bits (61), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Query: 16 ADNGNAYMVKSSAGTDGAYHASEAAPKGAQAVKVQPIEVPAISVDE 61
AD N +++ SAG + AYHA A A A ++ P+++ + +DE
Sbjct: 158 ADFSNCFIMGESAGGNIAYHAGLRA--AAVADELLPLKIKGLVLDE 201
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 28.1 bits (61), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 18/147 (12%)
Query: 75 IGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDG 134
+G G Y V+ GI + + I K+ + + + + + N V+LL D
Sbjct: 39 VGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLMGGPNIVKLLDIVRDQ 98
Query: 135 TSRV--LAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKAD 192
S+ L +E+ +N +L+ P L+ K L+Y H +
Sbjct: 99 HSKTPSLIFEYVNNTDF-KVLY-----------PTLTDYDIRYYIYELLKALDYCHSQG- 145
Query: 193 PHIIHRDIKSSNVLIFDDDVAKIADFD 219
I+HRD+K NV+I D ++ K+ D
Sbjct: 146 --IMHRDVKPHNVMI-DHELRKLRLID 169
>pdb|4H27|A Chain A, Modulating The Function Of Human Serine Racemase And Human
Serine Dehydratase By Protein Engineering
Length = 364
Score = 28.1 bits (61), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 44/102 (43%), Gaps = 16/102 (15%)
Query: 14 KAADNGNAYMVKSSAGTDGAYHASEAAPKGAQAVKVQPIEVPAISVDELKE--------- 64
+ A G A+ V SS+G G A A G A V P PA++++ LK
Sbjct: 87 RWAKQGCAHFVCSSSGNAGMAAAYAARQLGVPATIVVPGTTPALTIERLKNEGATVKVVG 146
Query: 65 --ITENFGTNALIGEGSYGRVYY-----GILKSGHAAAIKKL 99
+ E F + + + G VY ++ GHA+ +K+L
Sbjct: 147 ELLDEAFELAKALAKNNPGWVYIPPFDDPLIWEGHASIVKEL 188
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 28.1 bits (61), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 17/26 (65%), Gaps = 3/26 (11%)
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLI 207
K L+Y H K I+HRD+K NV+I
Sbjct: 143 KALDYCHSKG---IMHRDVKPHNVMI 165
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 27.7 bits (60), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 17/26 (65%), Gaps = 3/26 (11%)
Query: 182 KGLEYLHEKADPHIIHRDIKSSNVLI 207
K L+Y H K I+HRD+K NV+I
Sbjct: 148 KALDYCHSKG---IMHRDVKPHNVMI 170
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.133 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,730,662
Number of Sequences: 62578
Number of extensions: 316106
Number of successful extensions: 2547
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 782
Number of HSP's successfully gapped in prelim test: 240
Number of HSP's that attempted gapping in prelim test: 1023
Number of HSP's gapped (non-prelim): 1057
length of query: 246
length of database: 14,973,337
effective HSP length: 96
effective length of query: 150
effective length of database: 8,965,849
effective search space: 1344877350
effective search space used: 1344877350
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 50 (23.9 bits)