BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025896
(246 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3KBB|A Chain A, Crystal Structure Of Putative Beta-Phosphoglucomutase From
Thermotoga Maritima
Length = 216
Score = 88.2 bits (217), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 109/211 (51%), Gaps = 15/211 (7%)
Query: 23 EAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFF--VENIAGKHNIDI--AK 78
EAV+FD DG L D++PL+ A+R + + + G P TED + + + + I
Sbjct: 2 EAVIFDXDGVLXDTEPLYFEAYRRVAE----SYGKPYTEDLHRRIXGVPEREGLPILXEA 57
Query: 79 ILFPDDLPRGLKFC-EDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPREN 137
+ D L K E+K+ +F SE LK G+ + ++++ + +K A T+ P+
Sbjct: 58 LEIKDSLENFKKRVHEEKKRVF----SELLKENPGVREALEFVKSKRIKLALATSTPQRE 113
Query: 138 AELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAG 197
A + +L L +F V + GD+ + KP P+ Y LE L V + VFEDS SG++A
Sbjct: 114 ALERLRRLDLEKYFDVXVFGDQVKNGKPDPEIYLLVLERLNVVPEKVVVFEDSKSGVEAA 173
Query: 198 VAAGLP-VVGLT-TRNPEHVLLEANPTFLIK 226
+AG+ + G+ + N LLEA L+K
Sbjct: 174 KSAGIERIYGVVHSLNDGKALLEAGAVALVK 204
>pdb|2NYV|A Chain A, X-Ray Crystal Structure Of A Phosphoglycolate Phosphatase
From Aquifex Aeolicus
Length = 222
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 101/220 (45%), Gaps = 23/220 (10%)
Query: 22 LEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILF 81
L +LFD+DGTL DS A + L+E+G + P D + I G + K+L
Sbjct: 3 LRVILFDLDGTLIDSAKDIALALEKTLKELGLEEYYP---DNVTKYIGGGVRALLEKVLK 59
Query: 82 PDDLPRGLKFCEDKEAMFRKLASEQ----LKPISGLDKVKKWIEDRGLKRAAVTNAPREN 137
KF E+ +FRK E KP + + ++ +G K A V+N E
Sbjct: 60 D-------KFREEYVEVFRKHYLENPVVYTKPYPEIPYTLEALKSKGFKLAVVSNKLEEL 112
Query: 138 AELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAG 197
++ ++ L LS +F +++ GD KP P P K LE+L + + D+ + I+AG
Sbjct: 113 SKKILDILNLSGYFDLIVGGDTFGEKKPSPTPVLKTLEILGEEPEKALIVGDTDADIEAG 172
Query: 198 VAAGLPV-------VGLTTRNPEHVLLEANPTFLIKDYDD 230
AG V L ++ P+ L + P+ L+K D+
Sbjct: 173 KRAGTKTALALWGYVKLNSQIPDFTL--SRPSDLVKLXDN 210
>pdb|2YY6|A Chain A, Crystal Structure Of The Phosphoglycolate Phosphatase From
Aquifex Aeolicus Vf5
pdb|2YY6|B Chain B, Crystal Structure Of The Phosphoglycolate Phosphatase From
Aquifex Aeolicus Vf5
Length = 213
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 100/218 (45%), Gaps = 23/218 (10%)
Query: 24 AVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPD 83
+LFD+DGTL DS A + L+E+G + P D + I G + K+L
Sbjct: 3 VILFDLDGTLIDSAKDIALALEKTLKELGLEEYYP---DNVTKYIGGGVRALLEKVLKD- 58
Query: 84 DLPRGLKFCEDKEAMFRKLASEQ----LKPISGLDKVKKWIEDRGLKRAAVTNAPRENAE 139
KF E+ +FRK E KP + + ++ +G K A V+N E ++
Sbjct: 59 ------KFREEYVEVFRKHYLENPVVYTKPYPEIPYTLEALKSKGFKLAVVSNKLEELSK 112
Query: 140 LMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVA 199
++ L LS +F +++ GD KP P P K LE+L + + D+ + I+AG
Sbjct: 113 KILDILNLSGYFDLIVGGDTFGEKKPSPTPVLKTLEILGEEPEKALIVGDTDADIEAGKR 172
Query: 200 AGLPV-------VGLTTRNPEHVLLEANPTFLIKDYDD 230
AG V L ++ P+ L + P+ L+K D+
Sbjct: 173 AGTKTALALWGYVKLNSQIPDFTL--SRPSDLVKLXDN 208
>pdb|3DV9|A Chain A, Putative Beta-Phosphoglucomutase From Bacteroides Vulgatus
Length = 247
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 99/232 (42%), Gaps = 28/232 (12%)
Query: 22 LEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILF 81
L+AVLFD DG L DS P H ++ ++ + GF G+ E + E G I+I
Sbjct: 23 LKAVLFDXDGVLFDSXPNHAESWHKIXKRFGF--GLSREEAYXHEGRTGASTINIV---- 76
Query: 82 PDDLPRGLKFCED--------KEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNA 133
RG E+ K F K + P G +V I+ GL VT +
Sbjct: 77 -SRRERGHDATEEEIKAIYQAKTEEFNKCPKAERXP--GALEVLTKIKSEGLTPXVVTGS 133
Query: 134 PRENAELMISKLG--LSDFFQ--VVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFED 189
+ + ++ +L FQ + + + + KP P+PY AL+ + V E+
Sbjct: 134 GQTS---LLDRLNHNFPGIFQANLXVTAFDVKYGKPNPEPYLXALKKGGFKPNEALVIEN 190
Query: 190 SVSGIKAGVAAGLPVVGLTTRNPEH--VLLEANPTFLIKDYDD-PKLWSALE 238
+ G++AGVAAG+ + + T P H VLL L D K W L+
Sbjct: 191 APLGVQAGVAAGIFTIAVNT-GPLHDNVLLNEGANLLFHSXPDFNKNWETLQ 241
>pdb|2FDR|A Chain A, Crystal Structure Of Conserved Haloacid Dehalogenase-like
Protein Of Unknown Function Atu0790 From Agrobacterium
Tumefaciens Str. C58
Length = 229
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 95/228 (41%), Gaps = 19/228 (8%)
Query: 25 VLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGK--HNIDIAKILFP 82
++FD DG L DS+ + +L E G+ PI+ + E AG NI + ++
Sbjct: 7 IIFDCDGVLVDSEIIAAQVESRLLTEAGY----PISVEEXGERFAGXTWKNI-LLQVESE 61
Query: 83 DDLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMI 142
+P + E + +K I G VK + R +N+ + +
Sbjct: 62 ASIPLSASLLDKSEKLLDXRLERDVKIIDG---VKFALSRLTTPRCICSNSSSHRLDXXL 118
Query: 143 SKLGLSDFFQVVILGDE---CERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVA 199
+K+GL +F I + +R KP PD + VS D V EDSV GI A
Sbjct: 119 TKVGLKPYFAPHIYSAKDLGADRVKPKPDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARA 178
Query: 200 AGLPVVGLTTRN---PEHV--LLEANP-TFLIKDYDDPKLWSALEELD 241
AG V+G T + P H L +A T + + D P + +A E +
Sbjct: 179 AGXRVIGFTGASHTYPSHADRLTDAGAETVISRXQDLPAVIAAXAEWE 226
>pdb|3E58|A Chain A, Crystal Structure Of Putative Beta-Phosphoglucomutase From
Streptococcus Thermophilus
pdb|3E58|B Chain B, Crystal Structure Of Putative Beta-Phosphoglucomutase From
Streptococcus Thermophilus
Length = 214
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 95/192 (49%), Gaps = 10/192 (5%)
Query: 20 APLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFN-DGVPITEDFFVENIAGKHNIDIAK 78
A +EA++FD DG L D++ ++ L + G + D +P + FF+ G + + +
Sbjct: 3 AXVEAIIFDXDGVLFDTEKYYYDRRASFLGQKGISIDHLPPS--FFI----GGNTKQVWE 56
Query: 79 ILFPDDLPRG-LKFCEDKEAMFRKLASEQLKPISGLD--KVKKWIEDRGLKRAAVTNAPR 135
+ D+ + + +++ +++ K + D KV ++ +GL+ +++ +
Sbjct: 57 NILRDEYDKWDVSTLQEEYNTYKQNNPLPYKELIFPDVLKVLNEVKSQGLEIGLASSSVK 116
Query: 136 ENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIK 195
+ + + L FF +V+ G+E + +KP P+ Y AL+ L V + EDS GI
Sbjct: 117 ADIFRALEENRLQGFFDIVLSGEEFKESKPNPEIYLTALKQLNVQASRALIIEDSEKGIA 176
Query: 196 AGVAAGLPVVGL 207
AGVAA + V +
Sbjct: 177 AGVAADVEVWAI 188
>pdb|4GIB|A Chain A, 2.27 Angstrom Crystal Structure Of Beta-Phosphoglucomutase
(Pgmb) From Clostridium Difficile
pdb|4GIB|B Chain B, 2.27 Angstrom Crystal Structure Of Beta-Phosphoglucomutase
(Pgmb) From Clostridium Difficile
Length = 250
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 95/196 (48%), Gaps = 14/196 (7%)
Query: 20 APLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKI 79
A +EA +FD+DG + D+ H+ A+R++ ++G + E ++ I+ ++D +I
Sbjct: 24 AMIEAFIFDLDGVITDTAYYHYMAWRKLAHKVGIDIDTKFNES--LKGISRMESLD--RI 79
Query: 80 L------FPDDLPRGLKFCEDKEAMFRKLASEQLKP--ISGLDKVKKWIEDRGLKRAAVT 131
L + ++ E+K + L E + G++ + ++ +K
Sbjct: 80 LEFGNKKYSFSEEEKVRMAEEKNNYYVSLIDEITSNDILPGIESLLIDVKSNNIKIG--L 137
Query: 132 NAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSV 191
++ +NA +++ LG+SD F + +C+ KP P+ + + + L V+ + ED+
Sbjct: 138 SSASKNAINVLNHLGISDKFDFIADAGKCKNNKPHPEIFLMSAKGLNVNPQNCIGIEDAS 197
Query: 192 SGIKAGVAAGLPVVGL 207
+GI A +A + VG+
Sbjct: 198 AGIDAINSANMFSVGV 213
>pdb|1O03|A Chain A, Structure Of Pentavalent Phosphorous Intermediate Of An
Enzyme Catalyzed Phosphoryl Transfer Reaction Observed
On Cocrystallization With Glucose 6-Phosphate
pdb|1O08|A Chain A, Structure Of Pentavalent Phosphorous Intermediate Of An
Enzyme Catalyzed Phosphoryl Transfer Reaction Observed
On Cocrystallization With Glucose 1-Phosphate
pdb|1Z4N|A Chain A, Structure Of Beta-phosphoglucomutase With Inhibitor Bound
Alpha-galactose 1-phosphate Cocrystallized With Fluoride
pdb|1Z4N|B Chain B, Structure Of Beta-phosphoglucomutase With Inhibitor Bound
Alpha-galactose 1-phosphate Cocrystallized With Fluoride
pdb|1Z4O|A Chain A, Structure Of Beta-Phosphoglucomutase With Inhibitor Bound
Alpha-Galactose 1-Phosphate
pdb|1Z4O|B Chain B, Structure Of Beta-Phosphoglucomutase With Inhibitor Bound
Alpha-Galactose 1-Phosphate
pdb|1ZOL|A Chain A, Native Beta-Pgm
pdb|2WF5|A Chain A, Structure Of Beta-Phosphoglucomutase Inhibited With
Glucose- 6-Phospahte And Trifluoromagnesate
pdb|2WHE|A Chain A, Structure Of Native Beta-Phosphoglucomutase In An Open
Conformation Without Bound Ligands.
pdb|2WF7|A Chain A, Structure Of Beta-Phosphoglucomutase Inhibited With
Glucose- 6-Phosphonate And Aluminium Tetrafluoride
pdb|2WF6|A Chain A, Structure Of Beta-Phosphoglucomutase Inhibited With
Glucose- 6-Phospahte And Aluminium Tetrafluoride
pdb|2WF8|A Chain A, Structure Of Beta-Phosphoglucomutase Inhibited With
Glucose- 6-Phosphate, Glucose-1-Phosphate And Beryllium
Trifluoride
pdb|2WF9|A Chain A, Structure Of Beta-Phosphoglucomutase Inhibited With
Glucose- 6-Phosphate, And Beryllium Trifluoride, Crystal
Form 2
pdb|2WFA|A Chain A, Structure Of Beta-Phosphoglucomutase Inhibited With
Beryllium Trifluoride, In An Open Conformation
Length = 221
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 90/193 (46%), Gaps = 13/193 (6%)
Query: 22 LEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNID-IAKIL 80
+AVLFD+DG + D+ H A++ + +EIG N GV + F E + G D + KIL
Sbjct: 2 FKAVLFDLDGVITDTAEYHFRAWKALAEEIGIN-GV---DRQFNEQLKGVSREDSLQKIL 57
Query: 81 FPDDLPRGLKFCEDKEAMFRKLAS-----EQLKPISGLDKVKKWIED-RGLKRAAVTNAP 134
D + + E KE RK + + + P + + ++D R K +
Sbjct: 58 --DLADKKVSAEEFKELAKRKNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASA 115
Query: 135 RENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGI 194
+N ++ ++ L+ +F + E +KP PD + A + V+ + EDS +GI
Sbjct: 116 SKNGPFLLERMNLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSESIGLEDSQAGI 175
Query: 195 KAGVAAGLPVVGL 207
+A +G +G+
Sbjct: 176 QAIKDSGALPIGV 188
>pdb|3QYP|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides
Thetaiotaomicron, Glu47asn Mutant Complexed With Calcium
And Phosphate
pdb|3QYP|B Chain B, Crystal Structure Of Pyrophosphatase From Bacteroides
Thetaiotaomicron, Glu47asn Mutant Complexed With Calcium
And Phosphate
pdb|3QUC|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides
Thetaiotaomicron, Glu47asn Mutant Complexed With Sulfate
Length = 243
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 99/214 (46%), Gaps = 21/214 (9%)
Query: 22 LEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILF 81
L+AVLFD+DG L +S P H A+ ++++ G + E+ ++ N G+ I+F
Sbjct: 24 LKAVLFDMDGVLFNSMPYHSEAWHQVMKTHGLDLS---REEAYMHN--GRTGASTINIVF 78
Query: 82 PDDLPRGL------KFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPR 135
+L + +K +F + P G ++ + ++ GL VT + +
Sbjct: 79 QRELGKEATQEEIESIYHEKSILFNSYPEAERMP--GAWELLQKVKSEGLTPMVVTGSGQ 136
Query: 136 ENAELMISKL--GLSDFF--QVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSV 191
+ ++ +L F ++++ + + KP P+PY AL+ + D V E++
Sbjct: 137 LS---LLERLEHNFPGMFHKELMVTAFDVKYGKPNPEPYLMALKKGGLKADEAVVIENAP 193
Query: 192 SGIKAGVAAGLPVVGLTTRNPE-HVLLEANPTFL 224
G++AG AG+ + + T + VLL+A L
Sbjct: 194 LGVEAGHKAGIFTIAVNTGPLDGQVLLDAGADLL 227
>pdb|3QUQ|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides
Thetaiotaomicron, An Open Cap Conformation
pdb|3QU2|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides
Thetaiotaomicron, A Closed Cap Conformation
pdb|3QU2|B Chain B, Crystal Structure Of Pyrophosphatase From Bacteroides
Thetaiotaomicron, A Closed Cap Conformation
pdb|3QU2|C Chain C, Crystal Structure Of Pyrophosphatase From Bacteroides
Thetaiotaomicron, A Closed Cap Conformation
pdb|3QU2|D Chain D, Crystal Structure Of Pyrophosphatase From Bacteroides
Thetaiotaomicron, A Closed Cap Conformation
pdb|3QX7|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides
Thetaiotaomicron Complexed With Phosphate, A Closed Cap
Conformation
pdb|3QXG|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides
Thetaiotaomicron Complexed With Calcium, A Closed Cap
Conformation
pdb|3QXG|B Chain B, Crystal Structure Of Pyrophosphatase From Bacteroides
Thetaiotaomicron Complexed With Calcium, A Closed Cap
Conformation
Length = 243
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 99/214 (46%), Gaps = 21/214 (9%)
Query: 22 LEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILF 81
L+AVLFD+DG L +S P H A+ ++++ G + + E + E G I+I +F
Sbjct: 24 LKAVLFDMDGVLFNSMPYHSEAWHQVMKTHGLD--LSREEAYMHEGRTGASTINI---VF 78
Query: 82 PDDLPRGL------KFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPR 135
+L + +K +F + P G ++ + ++ GL VT + +
Sbjct: 79 QRELGKEATQEEIESIYHEKSILFNSYPEAERMP--GAWELLQKVKSEGLTPMVVTGSGQ 136
Query: 136 ENAELMISKL--GLSDFF--QVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSV 191
+ ++ +L F ++++ + + KP P+PY AL+ + D V E++
Sbjct: 137 LS---LLERLEHNFPGMFHKELMVTAFDVKYGKPNPEPYLMALKKGGLKADEAVVIENAP 193
Query: 192 SGIKAGVAAGLPVVGLTTRNPE-HVLLEANPTFL 224
G++AG AG+ + + T + VLL+A L
Sbjct: 194 LGVEAGHKAGIFTIAVNTGPLDGQVLLDAGADLL 227
>pdb|3FM9|A Chain A, Analysis Of The Structural Determinants Underlying
Discrimination Between Substrate And Solvent In Beta-
Phosphoglucomutase Catalysis
Length = 221
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 89/193 (46%), Gaps = 13/193 (6%)
Query: 22 LEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNID-IAKIL 80
+AVLFD+DG + D H A++ + +EIG N GV + F E + G D + KIL
Sbjct: 2 FKAVLFDLDGVITDPAEYHFRAWKALAEEIGIN-GV---DRQFNEQLKGVSREDSLQKIL 57
Query: 81 FPDDLPRGLKFCEDKEAMFRKLAS-----EQLKPISGLDKVKKWIED-RGLKRAAVTNAP 134
D + + E KE RK + + + P + + ++D R K +
Sbjct: 58 --DLADKKVSAEEFKELAKRKNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASA 115
Query: 135 RENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGI 194
+N ++ ++ L+ +F + E +KP PD + A + V+ + EDS +GI
Sbjct: 116 SKNGPFLLERMNLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSESIGLEDSQAGI 175
Query: 195 KAGVAAGLPVVGL 207
+A +G +G+
Sbjct: 176 QAIKDSGALPIGV 188
>pdb|3QUB|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides
Thetaiotaomicron, Glu47ala Mutant Complexed With Sulfate
Length = 243
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 99/214 (46%), Gaps = 21/214 (9%)
Query: 22 LEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILF 81
L+AVLFD+DG L +S P H A+ ++++ G + E+ ++ AG+ I+F
Sbjct: 24 LKAVLFDMDGVLFNSMPYHSEAWHQVMKTHGLDLS---REEAYMH--AGRTGASTINIVF 78
Query: 82 PDDLPRGL------KFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPR 135
+L + +K +F + P G ++ + ++ GL VT + +
Sbjct: 79 QRELGKEATQEEIESIYHEKSILFNSYPEAERMP--GAWELLQKVKSEGLTPMVVTGSGQ 136
Query: 136 ENAELMISKL--GLSDFF--QVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSV 191
+ ++ +L F ++++ + + KP P+PY AL+ + D V E++
Sbjct: 137 LS---LLERLEHNFPGMFHKELMVTAFDVKYGKPNPEPYLMALKKGGLKADEAVVIENAP 193
Query: 192 SGIKAGVAAGLPVVGLTTRNPE-HVLLEANPTFL 224
G++AG AG+ + + T + VLL+A L
Sbjct: 194 LGVEAGHKAGIFTIAVNTGPLDGQVLLDAGADLL 227
>pdb|2IOH|A Chain A, Crystal Structure Of Phosphonoacetaldehyde Hydrolase With
A K53r Mutation
pdb|2IOH|B Chain B, Crystal Structure Of Phosphonoacetaldehyde Hydrolase With
A K53r Mutation
pdb|2IOH|C Chain C, Crystal Structure Of Phosphonoacetaldehyde Hydrolase With
A K53r Mutation
pdb|2IOH|D Chain D, Crystal Structure Of Phosphonoacetaldehyde Hydrolase With
A K53r Mutation
Length = 267
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 94/219 (42%), Gaps = 31/219 (14%)
Query: 22 LEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILF 81
+EAV+FD GT D +A E+ EI GV IT + G ID + L
Sbjct: 6 IEAVIFDWAGTTVDYGC---FAPLEVFMEIFHKRGVAITAEE-ARKPMGLLRIDHVRAL- 60
Query: 82 PDDLPRGLKFCEDKEAMFRKLASEQ--------------------LKPISGLDKVKKWIE 121
++PR + +FR+L +E PI+G+ +V +
Sbjct: 61 -TEMPR---IASEWNRVFRQLPTEADIQEMYEEFEEILFAILPRYASPINGVKEVIASLR 116
Query: 122 DRGLKRAAVTNAPRENAELMISKLGLSDFF-QVVILGDECERAKPFPDPYFK-ALEMLKV 179
+RG+K + T RE +++ + L + ++ D+ +P+P +K A+E+
Sbjct: 117 ERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVY 176
Query: 180 SKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLE 218
+H D+VS +K G AG+ VG+ + E L E
Sbjct: 177 PMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTE 215
>pdb|2IOF|A Chain A, Crystal Structure Of Phosphonoacetaldehyde Hydrolase With
Sodium Borohydride-Reduced Substrate Intermediate
Length = 267
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 94/219 (42%), Gaps = 31/219 (14%)
Query: 22 LEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILF 81
+EAV+FD GT D +A E+ EI GV IT + G ID + L
Sbjct: 6 IEAVIFDWAGTTVDYGC---FAPLEVFMEIFHKRGVAITAEE-ARKPMGLLKIDHVRAL- 60
Query: 82 PDDLPRGLKFCEDKEAMFRKLASEQ--------------------LKPISGLDKVKKWIE 121
++PR + +FR+L +E PI+G+ +V +
Sbjct: 61 -TEMPR---IASEWNRVFRQLPTEADIQEMYEEFEEILFAILPRYASPINGVKEVIASLR 116
Query: 122 DRGLKRAAVTNAPRENAELMISKLGLSDFF-QVVILGDECERAKPFPDPYFK-ALEMLKV 179
+RG+K + T RE +++ + L + ++ D+ +P+P +K A+E+
Sbjct: 117 ERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVY 176
Query: 180 SKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLE 218
+H D+VS +K G AG+ VG+ + E L E
Sbjct: 177 PMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTE 215
>pdb|2IOF|K Chain K, Crystal Structure Of Phosphonoacetaldehyde Hydrolase With
Sodium Borohydride-Reduced Substrate Intermediate
Length = 267
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 94/219 (42%), Gaps = 31/219 (14%)
Query: 22 LEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILF 81
+EAV+FD GT D +A E+ EI GV IT + G ID + L
Sbjct: 6 IEAVIFDWAGTTVDYGC---FAPLEVFMEIFHKRGVAITAEE-ARKPMGLLXIDHVRAL- 60
Query: 82 PDDLPRGLKFCEDKEAMFRKLASEQ--------------------LKPISGLDKVKKWIE 121
++PR + +FR+L +E PI+G+ +V +
Sbjct: 61 -TEMPR---IASEWNRVFRQLPTEADIQEMYEEFEEILFAILPRYASPINGVKEVIASLR 116
Query: 122 DRGLKRAAVTNAPRENAELMISKLGLSDFF-QVVILGDECERAKPFPDPYFK-ALEMLKV 179
+RG+K + T RE +++ + L + ++ D+ +P+P +K A+E+
Sbjct: 117 ERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVY 176
Query: 180 SKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLE 218
+H D+VS +K G AG+ VG+ + E L E
Sbjct: 177 PMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTE 215
>pdb|3R9K|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides
Thetaiotaomicron, Glu47asp Mutant Complexed With
Sulfate, A Closed Cap Conformation
Length = 243
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 99/214 (46%), Gaps = 21/214 (9%)
Query: 22 LEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILF 81
L+AVLFD+DG L +S P H A+ ++++ G + + E + + G I+I +F
Sbjct: 24 LKAVLFDMDGVLFNSMPYHSEAWHQVMKTHGLD--LSREEAYMHDGRTGASTINI---VF 78
Query: 82 PDDLPRGL------KFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPR 135
+L + +K +F + P G ++ + ++ GL VT + +
Sbjct: 79 QRELGKEATQEEIESIYHEKSILFNSYPEAERMP--GAWELLQKVKSEGLTPMVVTGSGQ 136
Query: 136 ENAELMISKL--GLSDFF--QVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSV 191
+ ++ +L F ++++ + + KP P+PY AL+ + D V E++
Sbjct: 137 LS---LLERLEHNFPGMFHKELMVTAFDVKYGKPNPEPYLMALKKGGLKADEAVVIENAP 193
Query: 192 SGIKAGVAAGLPVVGLTTRNPE-HVLLEANPTFL 224
G++AG AG+ + + T + VLL+A L
Sbjct: 194 LGVEAGHKAGIFTIAVNTGPLDGQVLLDAGADLL 227
>pdb|3QU5|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides
Thetaiotaomicron, Asp11asn Mutant
pdb|3QU5|B Chain B, Crystal Structure Of Pyrophosphatase From Bacteroides
Thetaiotaomicron, Asp11asn Mutant
Length = 243
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 99/214 (46%), Gaps = 21/214 (9%)
Query: 22 LEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILF 81
L+AVLF++DG L +S P H A+ ++++ G + + E + E G I+I +F
Sbjct: 24 LKAVLFNMDGVLFNSMPYHSEAWHQVMKTHGLD--LSREEAYMHEGRTGASTINI---VF 78
Query: 82 PDDLPRGL------KFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPR 135
+L + +K +F + P G ++ + ++ GL VT + +
Sbjct: 79 QRELGKEATQEEIESIYHEKSILFNSYPEAERMP--GAWELLQKVKSEGLTPMVVTGSGQ 136
Query: 136 ENAELMISKL--GLSDFF--QVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSV 191
+ ++ +L F ++++ + + KP P+PY AL+ + D V E++
Sbjct: 137 LS---LLERLEHNFPGMFHKELMVTAFDVKYGKPNPEPYLMALKKGGLKADEAVVIENAP 193
Query: 192 SGIKAGVAAGLPVVGLTTRNPE-HVLLEANPTFL 224
G++AG AG+ + + T + VLL+A L
Sbjct: 194 LGVEAGHKAGIFTIAVNTGPLDGQVLLDAGADLL 227
>pdb|3QUT|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides
Thetaiotaomicron, Asp13asn Mutant, An Open Cap
Conformation
pdb|3QU7|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides
Thetaiotaomicron, Asp13asn Mutant Complexed With Calcium
And Phosphate
pdb|3QU7|B Chain B, Crystal Structure Of Pyrophosphatase From Bacteroides
Thetaiotaomicron, Asp13asn Mutant Complexed With Calcium
And Phosphate
pdb|3QU9|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides
Thetaiotaomicron, Asp13asn Mutant Complexed With
Magnesium And Tartrate
Length = 243
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 99/214 (46%), Gaps = 21/214 (9%)
Query: 22 LEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILF 81
L+AVLFD++G L +S P H A+ ++++ G + + E + E G I+I +F
Sbjct: 24 LKAVLFDMNGVLFNSMPYHSEAWHQVMKTHGLD--LSREEAYMHEGRTGASTINI---VF 78
Query: 82 PDDLPRGL------KFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPR 135
+L + +K +F + P G ++ + ++ GL VT + +
Sbjct: 79 QRELGKEATQEEIESIYHEKSILFNSYPEAERMP--GAWELLQKVKSEGLTPMVVTGSGQ 136
Query: 136 ENAELMISKL--GLSDFF--QVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSV 191
+ ++ +L F ++++ + + KP P+PY AL+ + D V E++
Sbjct: 137 LS---LLERLEHNFPGMFHKELMVTAFDVKYGKPNPEPYLMALKKGGLKADEAVVIENAP 193
Query: 192 SGIKAGVAAGLPVVGLTTRNPE-HVLLEANPTFL 224
G++AG AG+ + + T + VLL+A L
Sbjct: 194 LGVEAGHKAGIFTIAVNTGPLDGQVLLDAGADLL 227
>pdb|3NAS|A Chain A, The Crystal Structure Of Beta-Phosphoglucomutase From
Bacillus Subtilis
pdb|3NAS|B Chain B, The Crystal Structure Of Beta-Phosphoglucomutase From
Bacillus Subtilis
Length = 233
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 94/201 (46%), Gaps = 18/201 (8%)
Query: 22 LEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDF--FVENIAGKHNIDI--- 76
L+AV+FD+DG + D+ H A++ + ++I +P D ++ I+ + +++
Sbjct: 2 LKAVIFDLDGVITDTAEYHFLAWKHIAEQI----DIPFDRDXNERLKGISREESLESILI 57
Query: 77 ---AKILFPDDLPRGL--KFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVT 131
A+ + + + L + D + + KL E L P G+ ++ +++ +K +
Sbjct: 58 FGGAETKYTNAEKQELXHRKNRDYQXLISKLTPEDLLP--GIGRLLCQLKNENIKIGLAS 115
Query: 132 NAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSV 191
++ NA ++ +L + D F ++ + KP PD + A L VS ED+
Sbjct: 116 SS--RNAPKILRRLAIIDDFHAIVDPTTLAKGKPDPDIFLTAAAXLDVSPADCAAIEDAE 173
Query: 192 SGIKAGVAAGLPVVGLTTRNP 212
+GI A +AG VG+ P
Sbjct: 174 AGISAIKSAGXFAVGVGQGQP 194
>pdb|4G9B|A Chain A, Crystal Structure Of Beta-Phosphoglucomutase Homolog From
Escherichia Coli, Target Efi-501172, With Bound Mg, Open
Lid
Length = 243
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 89/193 (46%), Gaps = 12/193 (6%)
Query: 22 LEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAG-KHNIDIAKIL 80
L+ V+FD+DG + D+ LH A++++ EIG + + F E++ G + + +IL
Sbjct: 5 LQGVIFDLDGVITDTAHLHFQAWQQIAAEIGIS-----IDAQFNESLKGISRDESLRRIL 59
Query: 81 FPDDLPRGLKFCEDKEAMFRK--LASEQLKPISG---LDKVKKWIEDRGLKRAAVTNAPR 135
E + +RK L L+ ++ L ++ + D ++ +V A
Sbjct: 60 QHGGKEGDFNSQERAQLAYRKNLLYVHSLRELTVNAVLPGIRSLLADLRAQQISVGLASV 119
Query: 136 E-NAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGI 194
NA +++ L L +FF + + +KP P+ + A L V ED+ +GI
Sbjct: 120 SLNAPTILAALELREFFTFCADASQLKNSKPDPEIFLAACAGLGVPPQACIGIEDAQAGI 179
Query: 195 KAGVAAGLPVVGL 207
A A+G+ VG+
Sbjct: 180 DAINASGMRSVGI 192
>pdb|1LVH|A Chain A, The Structure Of Phosphorylated Beta-phosphoglucomutase
From Lactoccocus Lactis To 2.3 Angstrom Resolution
pdb|1LVH|B Chain B, The Structure Of Phosphorylated Beta-phosphoglucomutase
From Lactoccocus Lactis To 2.3 Angstrom Resolution
Length = 221
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 89/193 (46%), Gaps = 13/193 (6%)
Query: 22 LEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNID-IAKIL 80
+AVLF +DG + D+ H A++ + +EIG N GV + F E + G D + KIL
Sbjct: 2 FKAVLFXLDGVITDTAEYHFRAWKALAEEIGIN-GV---DRQFNEQLKGVSREDSLQKIL 57
Query: 81 FPDDLPRGLKFCEDKEAMFRKLAS-----EQLKPISGLDKVKKWIED-RGLKRAAVTNAP 134
D + + E KE RK + + + P + + ++D R K +
Sbjct: 58 --DLADKKVSAEEFKELAKRKNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASA 115
Query: 135 RENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGI 194
+N ++ ++ L+ +F + E +KP PD + A + V+ + EDS +GI
Sbjct: 116 SKNGPFLLERMNLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSESIGLEDSQAGI 175
Query: 195 KAGVAAGLPVVGL 207
+A +G +G+
Sbjct: 176 QAIKDSGALPIGV 188
>pdb|4EX6|A Chain A, Crystal Structure Of The Alnumycin P Phosphatase Alnb
pdb|4EX7|A Chain A, Crystal Structure Of The Alnumycin P Phosphatase In
Complex With Free Phosphate
Length = 237
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 76/193 (39%), Gaps = 15/193 (7%)
Query: 23 EAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKIL-F 81
V+ D+DGTL D+ A + E+ G ++ + + +A +L
Sbjct: 20 RGVILDLDGTLADTP----AAIATITAEVLAAMGTAVSRGAILSTVGRPLPASLAGLLGV 75
Query: 82 PDDLPRGLKFCEDKEAMF----RKLASEQLKP--ISGLDKVKKWIEDRGLKRAAVTNAPR 135
P + PR + E+ F R L P + GLD++ + + V A R
Sbjct: 76 PVEDPRVAEATEEYGRRFGAHVRAAGPRLLYPGVLEGLDRLSAAGFRLAMATSKVEKAAR 135
Query: 136 ENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIK 195
AEL GL V+ D ER KP PD L + + V D V +
Sbjct: 136 AIAELT----GLDTRLTVIAGDDSVERGKPHPDMALHVARGLGIPPERCVVIGDGVPDAE 191
Query: 196 AGVAAGLPVVGLT 208
G AAG+ V+G++
Sbjct: 192 MGRAAGMTVIGVS 204
>pdb|3QU4|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides
Thetaiotaomicron, Asp13ala Mutant
pdb|3QU4|B Chain B, Crystal Structure Of Pyrophosphatase From Bacteroides
Thetaiotaomicron, Asp13ala Mutant
pdb|3QU4|C Chain C, Crystal Structure Of Pyrophosphatase From Bacteroides
Thetaiotaomicron, Asp13ala Mutant
pdb|3QU4|D Chain D, Crystal Structure Of Pyrophosphatase From Bacteroides
Thetaiotaomicron, Asp13ala Mutant
pdb|3QU4|E Chain E, Crystal Structure Of Pyrophosphatase From Bacteroides
Thetaiotaomicron, Asp13ala Mutant
pdb|3QU4|F Chain F, Crystal Structure Of Pyrophosphatase From Bacteroides
Thetaiotaomicron, Asp13ala Mutant
pdb|3QU4|G Chain G, Crystal Structure Of Pyrophosphatase From Bacteroides
Thetaiotaomicron, Asp13ala Mutant
pdb|3QU4|H Chain H, Crystal Structure Of Pyrophosphatase From Bacteroides
Thetaiotaomicron, Asp13ala Mutant
Length = 243
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 98/214 (45%), Gaps = 21/214 (9%)
Query: 22 LEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILF 81
L+AVLFD+ G L +S P H A+ ++++ G + + E + E G I+I +F
Sbjct: 24 LKAVLFDMAGVLFNSMPYHSEAWHQVMKTHGLD--LSREEAYMHEGRTGASTINI---VF 78
Query: 82 PDDLPRGL------KFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPR 135
+L + +K +F + P G ++ + ++ GL VT + +
Sbjct: 79 QRELGKEATQEEIESIYHEKSILFNSYPEAERMP--GAWELLQKVKSEGLTPMVVTGSGQ 136
Query: 136 ENAELMISKL--GLSDFF--QVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSV 191
+ ++ +L F ++++ + + KP P+PY AL+ + D V E++
Sbjct: 137 LS---LLERLEHNFPGMFHKELMVTAFDVKYGKPNPEPYLMALKKGGLKADEAVVIENAP 193
Query: 192 SGIKAGVAAGLPVVGLTTRNPE-HVLLEANPTFL 224
G++AG AG+ + + T + VLL+A L
Sbjct: 194 LGVEAGHKAGIFTIAVNTGPLDGQVLLDAGADLL 227
>pdb|1FEZ|A Chain A, The Crystal Structure Of Bacillus Cereus
Phosphonoacetaldehyde Hydrolase Complexed With
Tungstate, A Product Analog
pdb|1FEZ|B Chain B, The Crystal Structure Of Bacillus Cereus
Phosphonoacetaldehyde Hydrolase Complexed With
Tungstate, A Product Analog
pdb|1FEZ|C Chain C, The Crystal Structure Of Bacillus Cereus
Phosphonoacetaldehyde Hydrolase Complexed With
Tungstate, A Product Analog
pdb|1FEZ|D Chain D, The Crystal Structure Of Bacillus Cereus
Phosphonoacetaldehyde Hydrolase Complexed With
Tungstate, A Product Analog
Length = 256
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 93/219 (42%), Gaps = 31/219 (14%)
Query: 22 LEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILF 81
+EAV+FD GT D +A E+ EI GV IT + G ID + L
Sbjct: 2 IEAVIFDWAGTTVDYGC---FAPLEVFMEIFHKRGVAITAEE-ARKPMGLLKIDHVRAL- 56
Query: 82 PDDLPRGLKFCEDKEAMFRKLASEQ--------------------LKPISGLDKVKKWIE 121
++PR + +FR+L +E PI+ + +V +
Sbjct: 57 -TEMPR---IASEWNRVFRQLPTEADIQEMYEEFEEILFAILPRYASPINAVKEVIASLR 112
Query: 122 DRGLKRAAVTNAPRENAELMISKLGLSDFF-QVVILGDECERAKPFPDPYFK-ALEMLKV 179
+RG+K + T RE +++ + L + ++ D+ +P+P +K A+E+
Sbjct: 113 ERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVY 172
Query: 180 SKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLE 218
+H D+VS +K G AG+ VG+ + E L E
Sbjct: 173 PMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTE 211
>pdb|1RQL|A Chain A, Crystal Structure Of Phosponoacetaldehyde Hydrolase
Complexed With Magnesium And The Inhibitor Vinyl
Sulfonate
pdb|1RQL|B Chain B, Crystal Structure Of Phosponoacetaldehyde Hydrolase
Complexed With Magnesium And The Inhibitor Vinyl
Sulfonate
pdb|1RQN|A Chain A, Phosphonoacetaldehyde Hydrolase Complexed With Magnesium
pdb|1RQN|B Chain B, Phosphonoacetaldehyde Hydrolase Complexed With Magnesium
Length = 267
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 93/219 (42%), Gaps = 31/219 (14%)
Query: 22 LEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILF 81
+EAV+FD GT D +A E+ EI GV IT + G ID + L
Sbjct: 6 IEAVIFDWAGTTVDYGC---FAPLEVFMEIFHKRGVAITAEE-ARKPMGLLKIDHVRAL- 60
Query: 82 PDDLPRGLKFCEDKEAMFRKLASEQ--------------------LKPISGLDKVKKWIE 121
++PR + +FR+L +E PI+ + +V +
Sbjct: 61 -TEMPR---IASEWNRVFRQLPTEADIQEMYEEFEEILFAILPRYASPINAVKEVIASLR 116
Query: 122 DRGLKRAAVTNAPRENAELMISKLGLSDFF-QVVILGDECERAKPFPDPYFK-ALEMLKV 179
+RG+K + T RE +++ + L + ++ D+ +P+P +K A+E+
Sbjct: 117 ERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVY 176
Query: 180 SKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLE 218
+H D+VS +K G AG+ VG+ + E L E
Sbjct: 177 PMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTE 215
>pdb|1SWV|A Chain A, Crystal Structure Of The D12a Mutant Of
Phosphonoacetaldehyde Hydrolase Complexed With Magnesium
pdb|1SWV|B Chain B, Crystal Structure Of The D12a Mutant Of
Phosphonoacetaldehyde Hydrolase Complexed With Magnesium
pdb|1SWW|A Chain A, Crystal Structure Of The Phosphonoacetaldehyde Hydrolase
D12a Mutant Complexed With Magnesium And Substrate
Phosphonoacetaldehyde
pdb|1SWW|B Chain B, Crystal Structure Of The Phosphonoacetaldehyde Hydrolase
D12a Mutant Complexed With Magnesium And Substrate
Phosphonoacetaldehyde
Length = 267
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 93/219 (42%), Gaps = 31/219 (14%)
Query: 22 LEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILF 81
+EAV+F GT D +A E+ EI GV IT + G ID + L
Sbjct: 6 IEAVIFAWAGTTVDYGC---FAPLEVFMEIFHKRGVAITAEE-ARKPMGLLKIDHVRAL- 60
Query: 82 PDDLPRGLKFCEDKEAMFRKLASEQ--------------------LKPISGLDKVKKWIE 121
++PR + +FR+L +E PI+G+ +V +
Sbjct: 61 -TEMPR---IASEWNRVFRQLPTEADIQEMYEEFEEILFAILPRYASPINGVKEVIASLR 116
Query: 122 DRGLKRAAVTNAPRENAELMISKLGLSDFF-QVVILGDECERAKPFPDPYFK-ALEMLKV 179
+RG+K + T RE +++ + L + ++ D+ +P+P +K A+E+
Sbjct: 117 ERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVY 176
Query: 180 SKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLE 218
+H D+VS +K G AG+ VG+ + E L E
Sbjct: 177 PMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTE 215
>pdb|2HSZ|A Chain A, Crystal Structure Of A Predicted Phosphoglycolate
Phosphatase (hs_0176) From Haemophilus Somnus 129pt At
1.90 A Resolution
pdb|2HSZ|B Chain B, Crystal Structure Of A Predicted Phosphoglycolate
Phosphatase (hs_0176) From Haemophilus Somnus 129pt At
1.90 A Resolution
Length = 243
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 90/218 (41%), Gaps = 22/218 (10%)
Query: 27 FDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPDDLP 86
FD+DGTL +S P + L+++ +P + V G A +L +
Sbjct: 28 FDLDGTLVNSLPDLALSINSALKDVN----LPQASENLVXTWIGNG----ADVLSQRAVD 79
Query: 87 RGLK-----FCEDKEAMFRK----LASEQLKPISGL-DKVKKWIED---RGLKRAAVTNA 133
K ED+ F++ E L IS L VK+ +E +G A VTN
Sbjct: 80 WACKQAEKELTEDEFKYFKRQFGFYYGENLCNISRLYPNVKETLEALKAQGYILAVVTNK 139
Query: 134 PRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSG 193
P ++ + +++ G+ F + G KP P P++ + DS +
Sbjct: 140 PTKHVQPILTAFGIDHLFSEXLGGQSLPEIKPHPAPFYYLCGKFGLYPKQILFVGDSQND 199
Query: 194 IKAGVAAGLPVVGLTTRNPEHV-LLEANPTFLIKDYDD 230
I A +AG VVGLT ++ + ++ P ++ D+ D
Sbjct: 200 IFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFAD 237
>pdb|1RDF|A Chain A, G50p Mutant Of Phosphonoacetaldehyde Hydrolase In Complex
With Substrate Analogue Vinyl Sulfonate
pdb|1RDF|B Chain B, G50p Mutant Of Phosphonoacetaldehyde Hydrolase In Complex
With Substrate Analogue Vinyl Sulfonate
pdb|1RDF|C Chain C, G50p Mutant Of Phosphonoacetaldehyde Hydrolase In Complex
With Substrate Analogue Vinyl Sulfonate
pdb|1RDF|D Chain D, G50p Mutant Of Phosphonoacetaldehyde Hydrolase In Complex
With Substrate Analogue Vinyl Sulfonate
pdb|1RDF|E Chain E, G50p Mutant Of Phosphonoacetaldehyde Hydrolase In Complex
With Substrate Analogue Vinyl Sulfonate
pdb|1RDF|F Chain F, G50p Mutant Of Phosphonoacetaldehyde Hydrolase In Complex
With Substrate Analogue Vinyl Sulfonate
Length = 267
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 91/219 (41%), Gaps = 31/219 (14%)
Query: 22 LEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILF 81
+EAV+FD GT D +A E+ EI GV IT + + + + KI
Sbjct: 6 IEAVIFDWAGTTVDYG---CFAPLEVFMEIFHKRGVAITAE------EARKPMPLLKIDH 56
Query: 82 PDDLPRGLKFCEDKEAMFRKLASEQ--------------------LKPISGLDKVKKWIE 121
L + + +FR+L +E PI+ + +V +
Sbjct: 57 VRALTEMPRIASEWNRVFRQLPTEADIQEMYEEFEEILFAILPRYASPINAVKEVIASLR 116
Query: 122 DRGLKRAAVTNAPRENAELMISKLGLSDFF-QVVILGDECERAKPFPDPYFK-ALEMLKV 179
+RG+K + T RE +++ + L + ++ D+ +P+P +K A+E+
Sbjct: 117 ERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVY 176
Query: 180 SKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLE 218
+H D+VS +K G AG+ VG+ + E L E
Sbjct: 177 PMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTE 215
>pdb|1TE2|A Chain A, Putative Phosphatase Ynic From Escherichia Coli K12
pdb|1TE2|B Chain B, Putative Phosphatase Ynic From Escherichia Coli K12
Length = 226
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 74/181 (40%), Gaps = 9/181 (4%)
Query: 24 AVLFDVDGTLCDSDPLHHYAFREMLQEIGFN----DGVPITEDFFVENIAGKHNIDIAKI 79
A +FD DG L DS+PL A ++ +G + + +P T ++ + +D+
Sbjct: 11 AAIFDXDGLLIDSEPLWDRAELDVXASLGVDISRRNELPDTLGLRIDXV-----VDLWYA 65
Query: 80 LFPDDLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAE 139
P + P + E A L E + G+ + +++GL + +P E
Sbjct: 66 RQPWNGPSRQEVVERVIARAISLVEETRPLLPGVREAVALCKEQGLLVGLASASPLHXLE 125
Query: 140 LMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVA 199
+++ L D F + ++ +KP P Y L V EDSV+G A A
Sbjct: 126 KVLTXFDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCVALEDSVNGXIASKA 185
Query: 200 A 200
A
Sbjct: 186 A 186
>pdb|3L5K|A Chain A, The Crystal Structure Of Human Haloacid Dehalogenase-Like
Hydrolase Domain Containing 1a (Hdhd1a)
Length = 250
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 97/214 (45%), Gaps = 15/214 (7%)
Query: 6 GENSVESKDALAKLAPLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFV 65
G ++ + A P+ ++FD+DG L D++ L+ F+E+ +
Sbjct: 14 GTENLYFQSMAAPPQPVTHLIFDMDGLLLDTERLYSVVFQEICNRYDKKYSWDVK----- 68
Query: 66 ENIAGKHNIDIAKILFPD-DLPRGL-KFCEDKEAMFRKL-ASEQLKPISGLDKVKKWIED 122
+ GK ++ A+I+ LP + E+ + +++ + L P G +K+ +
Sbjct: 69 SLVMGKKALEAAQIIIDVLQLPMSKEELVEESQTKLKEVFPTAALMP--GAEKLIIHLRK 126
Query: 123 RGLKRAAVTNAPRENAELMISKLG-LSDFFQVVILGD--ECERAKPFPDPYFKALEMLK- 178
G+ A T++ + ++ S+ F ++LGD E + KP PD + +
Sbjct: 127 HGIPFALATSSRSASFDMKTSRHKEFFSLFSHIVLGDDPEVQHGKPDPDIFLACAKRFSP 186
Query: 179 -VSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRN 211
+ + VFED+ +G++A +AAG+ VV + N
Sbjct: 187 PPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDGN 220
>pdb|4EEK|A Chain A, Crystal Structure Of Had Family Hydrolase Dr_1622 From
Deinococcus Radiodurans R1 (Target Efi-501256) With
Bound Phosphate And Sodium
pdb|4EEL|A Chain A, Crystal Structure Of Had Family Hydrolase Dr_1622 From
Deinococcus Radiodurans R1 (Target Efi-501256) With
Bound Citrate And Sodium
pdb|4EEN|A Chain A, Crystal Structure Of Had Family Hydrolase Dr_1622 From
Deinococcus Radiodurans R1 (Target Efi-501256) With
Bound Magnesium
Length = 259
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 75/177 (42%), Gaps = 8/177 (4%)
Query: 20 APLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFN-DGVPITEDFFVENIAGKHNIDIAK 78
AP +AVLFD+DG L +S+ + ++ +L E G + D I F + G +A
Sbjct: 26 APFDAVLFDLDGVLVESEGIIAQVWQSVLAERGLHLDLTEIAMYFTGQRFDGV----LAY 81
Query: 79 ILFPDDLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENA 138
+ D F + E F A + I G + + + G+ A +N+ R
Sbjct: 82 LAQQHDFVPPPDFLDVLETRFNA-AMTGVTAIEGAAETLRALRAAGVPFAIGSNSERGRL 140
Query: 139 ELMISKLGLSDFFQVVILGDEC--ERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSG 193
L + GL++ I R KP PD Y A + L + + V EDSV+G
Sbjct: 141 HLKLRVAGLTELAGEHIYDPSWVGGRGKPHPDLYTFAAQQLGILPERCVVIEDSVTG 197
>pdb|3D6J|A Chain A, Crystal Structure Of Putative Haloacid Dehalogenase-Like
Hydrolase From Bacteroides Fragilis
Length = 225
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 78/200 (39%), Gaps = 11/200 (5%)
Query: 26 LFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAG--KHNIDIAKILFPD 83
LFD D TL DS FR +L+ G+ IT+D I + + I +
Sbjct: 10 LFDFDYTLADSSRGIVTCFRSVLERHGYTG---ITDDXIKRTIGKTLEESFSILTGITDA 66
Query: 84 DLPRGLKFCEDKEAMFRKLASEQLKP--ISGLDKVKKWIEDRGLKRAAVTNAPRENAELM 141
D + KEA A+ L P + L +KK +G++ ++ R
Sbjct: 67 DQLESFRQEYSKEADIYXNANTILFPDTLPTLTHLKK----QGIRIGIISTKYRFRILSF 122
Query: 142 ISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAG 201
+ D+F ++I G++ KP P+ A++ LK + DS AAG
Sbjct: 123 LRNHXPDDWFDIIIGGEDVTHHKPDPEGLLLAIDRLKACPEEVLYIGDSTVDAGTAAAAG 182
Query: 202 LPVVGLTTRNPEHVLLEANP 221
+ G+T+ +A P
Sbjct: 183 VSFTGVTSGXTTAQEFQAYP 202
>pdb|3KZX|A Chain A, Crystal Structure Of A Had-Superfamily Hydrolase From
Ehrlichia Chaffeensis At 1.9a Resolution
Length = 231
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 80/189 (42%), Gaps = 22/189 (11%)
Query: 24 AVLFDVDGTLCDSD-PLHHYAFREMLQEIGFN----DGVP-ITEDFFVENIAGKHNIDIA 77
AV+FD TL D+ + F ++L ++G+ D +P T ++ + GK + A
Sbjct: 27 AVIFDWYNTLIDTSINIDRTTFYQVLDQMGYKNIDLDSIPNSTIPKYLITLLGKRWKE-A 85
Query: 78 KILFPDDLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPREN 137
IL+ + L + K M A E L + ++ + A V+N E
Sbjct: 86 TILYENSLEKSQK---SDNFMLNDGAIELLDTL----------KENNITMAIVSNKNGER 132
Query: 138 AELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVS-KDHTFVFEDSVSGIKA 196
I L+ +F +I + KP P+P AL + + F DS+S I++
Sbjct: 133 LRSEIHHKNLTHYFDSIIGSGDTGTIKPSPEPVLAALTNINIEPSKEVFFIGDSISDIQS 192
Query: 197 GVAAG-LPV 204
+ AG LP+
Sbjct: 193 AIEAGCLPI 201
>pdb|2HOQ|A Chain A, Crystal Structure Of The Probable Haloacid Dehalogenase
(Ph1655) From Pyrococcus Horikoshii Ot3
Length = 241
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 77/194 (39%), Gaps = 13/194 (6%)
Query: 22 LEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDF---------FVENIAGKH 72
++ + FD+D TL D+ L A + ++ + G+P+ DF ++
Sbjct: 2 VKVIFFDLDDTLVDTSKLAEIARKNAIENM-IRHGLPV--DFETAYSELIELIKEYGSNF 58
Query: 73 NIDIAKILFPDDLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTN 132
+L DLP K+ + L+ + G KV +++ G + +T+
Sbjct: 59 PYHFDYLLRRLDLPYNPKWISAGVIAYHNTKFAYLREVPGARKVLIRLKELGYELGIITD 118
Query: 133 APRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSV- 191
I +L L DFF+ VI+ D KP P + KAL+ V + + D +
Sbjct: 119 GNPVKQWEKILRLELDDFFEHVIISDFEGVKKPHPKIFKKALKAFNVKPEEALMVGDRLY 178
Query: 192 SGIKAGVAAGLPVV 205
S I G+ V
Sbjct: 179 SDIYGAKRVGMKTV 192
>pdb|2HI0|A Chain A, Crystal Structure Of Putative Phosphoglycolate Phosphatase
(Yp_619066.1) From Lactobacillus Delbrueckii Subsp.
Bulgaricus Atcc Baa-365 At 1.51 A Resolution
pdb|2HI0|B Chain B, Crystal Structure Of Putative Phosphoglycolate Phosphatase
(Yp_619066.1) From Lactobacillus Delbrueckii Subsp.
Bulgaricus Atcc Baa-365 At 1.51 A Resolution
Length = 240
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 79/191 (41%), Gaps = 27/191 (14%)
Query: 23 EAVLFDVDGTLCDSDPLHHYAFREMLQEIG-------------FNDGVPITEDFFVENIA 69
+A +FD DGT+ D+ A ++ G F GV + + A
Sbjct: 5 KAAIFDXDGTILDTSADLTSALNYAFEQTGHRHDFTVEDIKNFFGSGVVVAVTRALAYEA 64
Query: 70 GKHNIDIAKILFPDD-LPRGLKFCEDKEAM--FRKLASEQLK----PISGLDKVKKWIED 122
G + D+ +P + E + F+ ++ + P G+ + K +
Sbjct: 65 GSSRESLVAFGTKDEQIPEAVTQTEVNRVLEVFKPYYADHCQIKTGPFPGILDLXKNLRQ 124
Query: 123 RGLKRAAVTNAPRENAELMISKL--GLSDFFQVVILGDECE-RAKPFPDPYFKALEMLKV 179
+G+K A V+N P E ++++ +L G DF LG++ R KP PD + +++L V
Sbjct: 125 KGVKLAVVSNKPNEAVQVLVEELFPGSFDF----ALGEKSGIRRKPAPDXTSECVKVLGV 180
Query: 180 SKDHTFVFEDS 190
+D DS
Sbjct: 181 PRDKCVYIGDS 191
>pdb|2W4M|A Chain A, The Crystal Structure Of Human N-Acetylneuraminic Acid
Phosphatase, Nanp
Length = 270
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 88/214 (41%), Gaps = 25/214 (11%)
Query: 19 LAPLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAK 78
L+ + AV FD+D TL D+ E+++ + E+ E I K + ++K
Sbjct: 25 LSRVRAVFFDLDNTLIDTAGASRRGMLEVIKLL--QSKYHYKEE--AEIICDKVQVKLSK 80
Query: 79 ILFP--DDLPRGLKFCEDKEAMF--------RKLASE--------QLKPISGLDKVKKWI 120
F + L+ +EA+ RKLA E +L+ ++ + VK +
Sbjct: 81 ECFHPYNTCITDLRTSHWEEAIQETKGGAANRKLAEECYFLWKSTRLQHMTLAEDVKAML 140
Query: 121 ED--RGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLK 178
+ + ++ +TN R+ I +F V++G E KP P ++ +L
Sbjct: 141 TELRKEVRLLLLTNGDRQTQREKIEACACQSYFDAVVVGGEQREEKPAPSIFYYCCNLLG 200
Query: 179 VSKDHTFVFEDSV-SGIKAGVAAGLPVVGLTTRN 211
V + D++ + I+ G+ AGL +N
Sbjct: 201 VQPGDCVMVGDTLETDIQGGLNAGLKATVWINKN 234
>pdb|3UM9|A Chain A, Crystal Structure Of The Defluorinating L-2-Haloacid
Dehalogenase Bpro0530
pdb|3UM9|B Chain B, Crystal Structure Of The Defluorinating L-2-Haloacid
Dehalogenase Bpro0530
Length = 230
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 88/222 (39%), Gaps = 21/222 (9%)
Query: 19 LAPLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPIT--------EDFFVENIAG 70
+ ++AV+FD+ GTL D Y+ R + I G ++ E ++ + G
Sbjct: 2 MHAIKAVVFDLYGTLYDV-----YSVRTSCERIFPGQGEMVSKMWRQKQLEYTWMRTLMG 56
Query: 71 KH-NIDIAKI--LFPDDLPRGLKFCEDKEAMFRKLASE--QLKPISGLDKVKKWIEDRGL 125
++ + + A + L GL D EA L SE L P + + + + + GL
Sbjct: 57 QYQDFESATLDALRYTCGSLGLALDADGEA---HLCSEYLSLTPFADVPQALQQLRAAGL 113
Query: 126 KRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTF 185
K A ++N R + ++ GL++ F +I DE KP Y A++ L + +
Sbjct: 114 KTAILSNGSRHSIRQVVGNSGLTNSFDHLISVDEVRLFKPHQKVYELAMDTLHLGESEIL 173
Query: 186 VFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKD 227
+ G PV + N L P ++ D
Sbjct: 174 FVSCNSWDATGAKYFGYPVCWINRSNGVFDQLGVVPDIVVSD 215
>pdb|3M9L|A Chain A, Crystal Structure Of Probable Had Family Hydrolase From
Pseudomonas Fluorescens Pf-5
pdb|2YBD|A Chain A, Crystal Structure Of Probable Had Family Hydrolase From
Pseudomonas Fluorescens Pf-5 With Bound Phosphate
pdb|3R09|A Chain A, Crystal Structure Of Probable Had Family Hydrolase From
Pseudomonas Fluorescens Pf-5 With Bound Mg
Length = 205
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 75/190 (39%), Gaps = 25/190 (13%)
Query: 18 KLAPLEAVLFDVDGTLCDSDPLHHYA-FREMLQEIGFNDGVPITEDFFVENIAGKHNIDI 76
L+ ++ +FD DGTL + +H +A RE L +P +D A +
Sbjct: 2 SLSEIKHWVFDXDGTLTIA--VHDFAAIREALS-------IPAEDDILTHLAALPADESA 52
Query: 77 AKILFPDDLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRE 136
AK + + R L ++ +P G ++ + + RG + +T RE
Sbjct: 53 AKHAWLLEHERDL--------------AQGSRPAPGAVELVRELAGRGYRLGILTRNARE 98
Query: 137 NAELMISKLGLSDFF-QVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIK 195
A + + +GL+D F + +LG + KP P K E VS D +
Sbjct: 99 LAHVTLEAIGLADCFAEADVLGRDEAPPKPHPGGLLKLAEAWDVSPSRXVXVGDYRFDLD 158
Query: 196 AGVAAGLPVV 205
G AAG V
Sbjct: 159 CGRAAGTRTV 168
>pdb|2HDO|A Chain A, Crystal Structure Of Putative Phosphoglycolate Phosphatase
(Np_784602.1) From Lactobacillus Plantarum At 1.50 A
Resolution
Length = 209
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 70/192 (36%), Gaps = 20/192 (10%)
Query: 23 EAVLFDVDGTLCDSDPLHHYAFREMLQEIG--FNDGVPITEDFFVENIAGKHNIDIAKIL 80
+A+ FD+DGTL +S P + RE+L G F+ + F + IA
Sbjct: 5 QALXFDIDGTLTNSQPAYTTVXREVLATYGKPFSPAQ-AQKTFPXAAEQAXTELGIAASE 63
Query: 81 FPDDLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIED--RGLKRAAVTNAPRENA 138
F + +A + + + I + E L+ VT+ R
Sbjct: 64 F-----------DHFQAQYEDVXASHYDQIELYPGITSLFEQLPSELRLGIVTSQRRNEL 112
Query: 139 ELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGV 198
E V I D+ + KP P P ALE + V+ + DSVS +
Sbjct: 113 ESGXRSYPFXXRXAVTISADDTPKRKPDPLPLLTALEKVNVAPQNALFIGDSVSDEQTAQ 172
Query: 199 AA----GLPVVG 206
AA GL V G
Sbjct: 173 AANVDFGLAVWG 184
>pdb|2GFH|A Chain A, Crystal Structure Of A N-acetylneuraminic Acid Phosphatase
(nanp) From Mus Musculus At 1.90 A Resolution
Length = 260
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 89/218 (40%), Gaps = 25/218 (11%)
Query: 6 GENSVESKDALAKLAPLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFV 65
G + + L+ + AV FD+D TL D+ E+++ + E+
Sbjct: 2 GSDKIHHHHHHMGLSRVRAVFFDLDNTLIDTAGASRRGMLEVIKLL--QSKYHYKEE--A 57
Query: 66 ENIAGKHNIDIAKILFP--DDLPRGLKFCEDKEAMF--------RKLASE--------QL 107
E I K + ++K F ++ +EA+ RKLA E +L
Sbjct: 58 EIICDKVQVKLSKECFHPYSTCITDVRTSHWEEAIQETKGGADNRKLAEECYFLWKSTRL 117
Query: 108 KPISGLDKVKKWIED--RGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKP 165
+ + D VK + + + ++ +TN R+ I +F +++G E + KP
Sbjct: 118 QHMILADDVKAMLTELRKEVRLLLLTNGDRQTQREKIEACACQSYFDAIVIGGEQKEEKP 177
Query: 166 FPDPYFKALEMLKVSKDHTFVFEDSV-SGIKAGVAAGL 202
P ++ ++L V + D++ + I+ G+ AGL
Sbjct: 178 APSIFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGL 215
>pdb|3IRU|A Chain A, Crystal Structure Of Phoshonoacetaldehyde Hydrolase Like
Protein From Oleispira Antarctica
pdb|3IRU|B Chain B, Crystal Structure Of Phoshonoacetaldehyde Hydrolase Like
Protein From Oleispira Antarctica
Length = 277
Score = 35.8 bits (81), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 87/211 (41%), Gaps = 21/211 (9%)
Query: 20 APLEAVLFDVDGTLCDSDPLHH-YAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAK 78
P+EA++ D GT D L YAF E+ ++ +G+ +T+ E + + I +
Sbjct: 12 GPVEALILDWAGTTIDFGSLAPVYAFXELFKQ----EGIEVTQAEAREPXGTEKSEHIRR 67
Query: 79 ILFPDDLPRGLKFC-------EDKEAMF-------RKLASEQLKPISGLDKVKKWIEDRG 124
L + ED + ++ ++ +++ + I G +V + +G
Sbjct: 68 XLGNSRIANAWLSIKGQASNEEDIKRLYDLFAPIQTRIVAQRSQLIPGWKEVFDKLIAQG 127
Query: 125 LKRAAVTN-APRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFK-ALEMLKVSKD 182
+K T P A +I+ + + R +PFPD K ALE+ +
Sbjct: 128 IKVGGNTGYGPGXXAPALIAAKEQGYTPASTVFATDVVRGRPFPDXALKVALELEVGHVN 187
Query: 183 HTFVFEDSVSGIKAGVAAGLPVVGLTTRNPE 213
+D++ GI+ G+ AG VG++ E
Sbjct: 188 GCIKVDDTLPGIEEGLRAGXWTVGVSCSGNE 218
>pdb|2QLT|A Chain A, Crystal Structure Of An Isoform Of
Dl-Glycerol-3-Phosphatase, Rhr2p, From Saccharomyces
Cerevisiae
Length = 275
Score = 35.0 bits (79), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 102/233 (43%), Gaps = 24/233 (10%)
Query: 22 LEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDG---VPITEDFFVENIAGKHNIDIAK 78
+ A LFDVDGT+ S P +R+ ++ + D + I+ + + K D A
Sbjct: 35 INAALFDVDGTIIISQPAIAAFWRDFGKDKPYFDAEHVIHISHGWRTYDAIAKFAPDFAD 94
Query: 79 ILFPDDLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENA 138
+ + L + + ++ A + ++ L K +KW A T+ R+ A
Sbjct: 95 EEYVNKLEGEIPEKYGEHSIEVPGAVKLCNALNALPK-EKW--------AVATSGTRDMA 145
Query: 139 ELM--ISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKV-------SKDHTFVFED 189
+ I K+ ++F I ++ ++ KP P+PY K L SK VFED
Sbjct: 146 KKWFDILKIKRPEYF---ITANDVKQGKPHPEPYLKGRNGLGFPINEQDPSKSKVVVFED 202
Query: 190 SVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALEELDK 242
+ +GI AG AAG +VG+ T L E ++K+++ ++ E D+
Sbjct: 203 APAGIAAGKAAGCKIVGIATTFDLDFLKEKGCDIIVKNHESIRVGEYNAETDE 255
>pdb|1AQ6|A Chain A, Structure Of L-2-Haloacid Dehalogenase From Xanthobacter
Autotrophicus
pdb|1AQ6|B Chain B, Structure Of L-2-Haloacid Dehalogenase From Xanthobacter
Autotrophicus
Length = 253
Score = 35.0 bits (79), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%)
Query: 125 LKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVS 180
LKRA ++N + + +++ GL+D F VI D KP PD Y E+L V+
Sbjct: 108 LKRAILSNGAPDMLQALVANAGLTDSFDAVISVDAKRVFKPHPDSYALVEEVLGVT 163
>pdb|1QQ5|A Chain A, Structure Of L-2-Haloacid Dehalogenase From Xanthobacter
Autotrophicus
pdb|1QQ5|B Chain B, Structure Of L-2-Haloacid Dehalogenase From Xanthobacter
Autotrophicus
Length = 253
Score = 35.0 bits (79), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%)
Query: 125 LKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVS 180
LKRA ++N + + +++ GL+D F VI D KP PD Y E+L V+
Sbjct: 108 LKRAILSNGAPDMLQALVANAGLTDSFDAVISVDAKRVFKPHPDSYALVEEVLGVT 163
>pdb|1QQ7|A Chain A, Structure Of L-2-Haloacid Dehalogenase From Xanthobacter
Autotrophicus With Chloropropionic Acid Covalently Bound
pdb|1QQ7|B Chain B, Structure Of L-2-Haloacid Dehalogenase From Xanthobacter
Autotrophicus With Chloropropionic Acid Covalently Bound
pdb|1QQ6|A Chain A, Structure Of L-2-Haloacid Dehalogenase From Xanthobacter
Autotrophicus With Chloroacetic Acid Covalently Bound
pdb|1QQ6|B Chain B, Structure Of L-2-Haloacid Dehalogenase From Xanthobacter
Autotrophicus With Chloroacetic Acid Covalently Bound
Length = 253
Score = 35.0 bits (79), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%)
Query: 125 LKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVS 180
LKRA ++N + + +++ GL+D F VI D KP PD Y E+L V+
Sbjct: 108 LKRAILSNGAPDMLQALVANAGLTDSFDAVISVDAKRVFKPHPDSYALVEEVLGVT 163
>pdb|2GO7|A Chain A, Crystal Structure Of A Hydrolase From Haloacid
Dehalogenase-Like Family (Sp_2064) From Streptococcus
Pneumoniae Tigr4 At 2.10 A Resolution
pdb|2GO7|B Chain B, Crystal Structure Of A Hydrolase From Haloacid
Dehalogenase-Like Family (Sp_2064) From Streptococcus
Pneumoniae Tigr4 At 2.10 A Resolution
pdb|2GO7|C Chain C, Crystal Structure Of A Hydrolase From Haloacid
Dehalogenase-Like Family (Sp_2064) From Streptococcus
Pneumoniae Tigr4 At 2.10 A Resolution
pdb|2GO7|D Chain D, Crystal Structure Of A Hydrolase From Haloacid
Dehalogenase-Like Family (Sp_2064) From Streptococcus
Pneumoniae Tigr4 At 2.10 A Resolution
Length = 207
Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/184 (19%), Positives = 78/184 (42%), Gaps = 6/184 (3%)
Query: 24 AVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPD 83
A ++D+DGTL DS + A ++E +P ++ E I K+++ + +
Sbjct: 6 AFIWDLDGTLLDS----YEAILSGIEETFAQFSIPYDKEKVREFIF-KYSVQDLLVRVAE 60
Query: 84 DLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMIS 143
D ++ A + Q+ G +V W ++ G+++ T+ NA ++
Sbjct: 61 DRNLDVEVLNQVRAQSLAEKNAQVVLXPGAREVLAWADESGIQQFIYTHKGN-NAFTILK 119
Query: 144 KLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLP 203
LG+ +F ++ KP P+ L+ +++ D+T+ D ++ +G+
Sbjct: 120 DLGVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQ 179
Query: 204 VVGL 207
+
Sbjct: 180 SINF 183
>pdb|3VAY|A Chain A, Crystal Structure Of 2-Haloacid Dehalogenase From
Pseudomonas Syringae Pv. Tomato Dc3000
pdb|3VAY|B Chain B, Crystal Structure Of 2-Haloacid Dehalogenase From
Pseudomonas Syringae Pv. Tomato Dc3000
Length = 230
Score = 32.3 bits (72), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 23/43 (53%)
Query: 137 NAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKV 179
N + +LGL+D+F + ++ KP P P+ +AL KV
Sbjct: 128 NGNADVRRLGLADYFAFALCAEDLGIGKPDPAPFLEALRRAKV 170
>pdb|3S6J|A Chain A, The Crystal Structure Of A Hydrolase From Pseudomonas
Syringae
pdb|3S6J|B Chain B, The Crystal Structure Of A Hydrolase From Pseudomonas
Syringae
pdb|3S6J|C Chain C, The Crystal Structure Of A Hydrolase From Pseudomonas
Syringae
pdb|3S6J|D Chain D, The Crystal Structure Of A Hydrolase From Pseudomonas
Syringae
pdb|3S6J|E Chain E, The Crystal Structure Of A Hydrolase From Pseudomonas
Syringae
pdb|3S6J|F Chain F, The Crystal Structure Of A Hydrolase From Pseudomonas
Syringae
Length = 233
Score = 32.0 bits (71), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 43/217 (19%), Positives = 82/217 (37%), Gaps = 11/217 (5%)
Query: 19 LAPLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAK 78
L P + +FD+DGTL DS + A++E L + +P+ I + +
Sbjct: 3 LRPQTSFIFDLDGTLTDSVYQNVAAWKEALDA----ENIPLAXWRIHRKIGXSGGLXLKS 58
Query: 79 ILFPDDLP----RGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAP 134
+ + + E + +L Q+ + G ++ + ++ LK T+
Sbjct: 59 LSRETGXSITDEQAERLSEKHAQAYERL-QHQIIALPGAVELLETLDKENLKWCIATSGG 117
Query: 135 RENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGI 194
+ A + + L L ++ D+ KP PD + A + + D V D++
Sbjct: 118 IDTATINLKALKLDINKINIVTRDDVSYGKPDPDLFLAAAKKIGAPIDECLVIGDAIWDX 177
Query: 195 KAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDP 231
A VGL + + LE + Y+DP
Sbjct: 178 LAARRCKATGVGLLSGGYDIGELERAGALRV--YEDP 212
>pdb|3AKF|A Chain A, Crystal Structure Of Exo-1,5-Alpha-L-Arabinofuranosidase
pdb|3AKG|A Chain A, Crystal Structure Of Exo-1,5-Alpha-L-Arabinofuranosidase
Complexed With Alpha-1,5-L-Arabinofuranobiose
pdb|3AKH|A Chain A, Crystal Structure Of Exo-1,5-Alpha-L-Arabinofuranosidase
Complexed With Alpha-1,5-L-Arabinofuranotriose
pdb|3AKI|A Chain A, Crystal Structure Of Exo-1,5-Alpha-L-Arabinofuranosidase
Complexed With Alpha-L-Arabinofuranosyl Azido
Length = 468
Score = 32.0 bits (71), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Query: 37 DPLHHYAFREMLQEIGFN-DGVPITEDFFVENIAGKHNIDIAKILFPDDLPRGLKFCEDK 95
DPL+ R LQ++ +N DG P +F + G + + +PD R F
Sbjct: 288 DPLNDPNRRTRLQKVYWNADGTP---NFGIPVADGVTPVRFSSYNYPDRYIRHWDFRARI 344
Query: 96 EAMFRKLASEQLKPISGL 113
EA LA Q + ++GL
Sbjct: 345 EANVTNLADSQFRVVTGL 362
>pdb|2AH5|A Chain A, Hydrolase, Haloacid Dehalogenase-Like Family Protein
Sp0104 From Streptococcus Pneumoniae
Length = 210
Score = 31.2 bits (69), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 22 LEAVLFDVDGTLCDSDPLHHYAFREMLQEIG 52
+ A+ FD+DGTL DS H AF +E+G
Sbjct: 4 ITAIFFDLDGTLVDSSIGIHNAFTYTFKELG 34
>pdb|2OCA|A Chain A, The Crystal Structure Of T4 Uvsw
Length = 510
Score = 30.4 bits (67), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 56/138 (40%), Gaps = 22/138 (15%)
Query: 81 FPDDLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAEL 140
+PD+ LK K E++K I+GL K KWI +K A ENA +
Sbjct: 306 YPDEFTTKLK---------GKTYQEEIKIITGLSKRNKWIAKLAIKLA----QKDENAFV 352
Query: 141 MISKLGLSD-FFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVA 199
M + F ++ + Y+ + E+ +++ ++ GI +
Sbjct: 353 MFKHVSHGKAIFDLI--------KNEYDKVYYVSGEVDTETRNIMKTLAENGKGIIIVAS 404
Query: 200 AGLPVVGLTTRNPEHVLL 217
G+ G++ +N HV+L
Sbjct: 405 YGVFSTGISVKNLHHVVL 422
>pdb|2K7J|A Chain A, Human Acylphosphatase(Acph) Surface Charge-Optimized
Length = 99
Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 109 PISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVV 154
PIS + +++KW+E RG + + A +N E +I KL SD FQ+V
Sbjct: 55 PISKVREMQKWLETRGSPESHIDKANFKN-EKVILKLDYSD-FQIV 98
>pdb|2W4C|A Chain A, Human Common-Type Acylphosphatase Variant, A99
Length = 99
Score = 28.9 bits (63), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 100 RKLASEQLK-PISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVV 154
R QL+ PIS + +++W+E RG ++ + A N E +I KL SD FQ+V
Sbjct: 45 RGTVQGQLQGPISKVRHMQEWLETRGSPKSHIDKANFNN-EKVILKLDYSD-FQIV 98
>pdb|2W4P|A Chain A, Human Common-Type Acylphosphatase Variant, A99g
Length = 99
Score = 28.9 bits (63), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 100 RKLASEQLK-PISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVV 154
R QL+ PIS + +++W+E RG ++ + A N E +I KL SD FQ+V
Sbjct: 45 RGTVQGQLQGPISKVRHMQEWLETRGSPKSHIDKANFNN-EKVILKLDYSD-FQIV 98
>pdb|2VH7|A Chain A, Crystal Structure Of Human Common-Type Acylphosphatase
Length = 99
Score = 28.9 bits (63), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 100 RKLASEQLK-PISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVV 154
R QL+ PIS + +++W+E RG ++ + A N E +I KL SD FQ+V
Sbjct: 45 RGTVQGQLQGPISKVRHMQEWLETRGSPKSHIDKANFNN-EKVILKLDYSD-FQIV 98
>pdb|2K7K|A Chain A, Human Acylphosphatase (Acph) Common Type
Length = 99
Score = 28.9 bits (63), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 100 RKLASEQLK-PISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVV 154
R QL+ PIS + +++W+E RG ++ + A N E +I KL SD FQ+V
Sbjct: 45 RGTVQGQLQGPISKVRHMQEWLETRGSPKSHIDKANFNN-EKVILKLDYSD-FQIV 98
>pdb|1QH9|A Chain A, Enzyme-Product Complex Of L-2-Haloacid Dehalogenase
pdb|1JUD|A Chain A, L-2-haloacid Dehalogenase
Length = 232
Score = 28.9 bits (63), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 32/60 (53%)
Query: 106 QLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKP 165
+L P S + + ++ RGLK A ++N ++ + ++S GL D F ++ D + KP
Sbjct: 93 RLAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHLLSVDPVQVYKP 152
>pdb|1ZRM|A Chain A, Crystal Structure Of The Reaction Intermediate Of
L-2-Haloacid Dehalogenase With 2-Chloro-N-Butyrate
pdb|1ZRN|A Chain A, Intermediate Structure Of L-2-haloacid Dehalogenase With
Monochloroacetate
Length = 232
Score = 28.9 bits (63), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 32/60 (53%)
Query: 106 QLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKP 165
+L P S + + ++ RGLK A ++N ++ + ++S GL D F ++ D + KP
Sbjct: 93 RLAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHLLSVDPVQVYKP 152
>pdb|1R4K|A Chain A, Solution Structure Of The Drosophila Argonaute 1 Paz
Domain
Length = 169
Score = 28.9 bits (63), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 46/111 (41%), Gaps = 22/111 (19%)
Query: 104 SEQLKPISGLDKVKKWIEDRGLK-----------RAAVTNAPRENAELMISKLGLSDFFQ 152
+EQ KP++ +VK E +GLK + V N R A++ L L +
Sbjct: 24 NEQRKPLTDSQRVKFTKEIKGLKIEITHCGQMRRKYRVCNVTRRPAQMQSFPLQLENGQT 83
Query: 153 VVILGDECERAKPFPDPY-----FKALEMLKVSKDHTFVFED-SVSGIKAG 197
V EC AK F D Y + L L+V ++H + V I AG
Sbjct: 84 V-----ECTVAKYFLDKYRMKLRYPHLPCLQVGQEHKHTYLPLEVCNIVAG 129
>pdb|3RBI|A Chain A, The Type Iii Crystal Structure Of Streptococcus Agalactiae
Sortase C1
pdb|3RBI|B Chain B, The Type Iii Crystal Structure Of Streptococcus Agalactiae
Sortase C1
pdb|3RBK|A Chain A, The Type Ii Crystal Structure Of Streptococcus Agalactiae
Sortase C1
pdb|3RBK|B Chain B, The Type Ii Crystal Structure Of Streptococcus Agalactiae
Sortase C1
pdb|3TB7|A Chain A, The Type I Crystal Structure Of Streptococcus Agalactiae
Sortase C1
pdb|3TBE|A Chain A, The Crystal Structure Of The Complex Of Streptococcus
Agalactiae Sortase C1 And Mtset
pdb|3TBE|B Chain B, The Crystal Structure Of The Complex Of Streptococcus
Agalactiae Sortase C1 And Mtset
pdb|3TBE|C Chain C, The Crystal Structure Of The Complex Of Streptococcus
Agalactiae Sortase C1 And Mtset
pdb|3TBE|D Chain D, The Crystal Structure Of The Complex Of Streptococcus
Agalactiae Sortase C1 And Mtset
pdb|3TBE|E Chain E, The Crystal Structure Of The Complex Of Streptococcus
Agalactiae Sortase C1 And Mtset
pdb|3TBE|F Chain F, The Crystal Structure Of The Complex Of Streptococcus
Agalactiae Sortase C1 And Mtset
Length = 230
Score = 28.5 bits (62), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Query: 55 DGVPITEDFFVENIAGK--HNIDIAKILFPDDL 85
D V + + F++E+I GK + +D K++ PD L
Sbjct: 146 DKVTVGDRFYIEHIGGKIAYQVDQIKVIAPDQL 178
>pdb|4G1J|A Chain A, Sortase C1 Of Gbs Pilus Island 1
pdb|4G1J|B Chain B, Sortase C1 Of Gbs Pilus Island 1
Length = 222
Score = 28.5 bits (62), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Query: 55 DGVPITEDFFVENIAGK--HNIDIAKILFPDDL 85
D V + + F++E+I GK + +D K++ PD L
Sbjct: 135 DKVTVGDRFYIEHIGGKIAYQVDQIKVIAPDQL 167
>pdb|3RBJ|A Chain A, Crystal Structure Of The Lid-Mutant Of Streptococcus
Agalactiae Sortase C1
pdb|3RBJ|B Chain B, Crystal Structure Of The Lid-Mutant Of Streptococcus
Agalactiae Sortase C1
Length = 230
Score = 28.5 bits (62), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Query: 55 DGVPITEDFFVENIAGK--HNIDIAKILFPDDL 85
D V + + F++E+I GK + +D K++ PD L
Sbjct: 146 DKVTVGDRFYIEHIGGKIAYQVDQIKVIAPDQL 178
>pdb|3TOQ|A Chain A, Acylphosphatase With Mesophilic Surface And Thermophilic
Core
Length = 99
Score = 27.7 bits (60), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 100 RKLASEQLK-PISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVV 154
R QL+ PIS + +++W E RG ++ + A N E +I KL SD FQ+V
Sbjct: 45 RGTVQAQLQGPISKVRHLQEWAETRGSPKSHIDKANFNN-EKVILKLDYSD-FQIV 98
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.138 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,841,053
Number of Sequences: 62578
Number of extensions: 324820
Number of successful extensions: 980
Number of sequences better than 100.0: 76
Number of HSP's better than 100.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 887
Number of HSP's gapped (non-prelim): 83
length of query: 246
length of database: 14,973,337
effective HSP length: 96
effective length of query: 150
effective length of database: 8,965,849
effective search space: 1344877350
effective search space used: 1344877350
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 50 (23.9 bits)