BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025897
(246 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9XG77|PSA6_TOBAC Proteasome subunit alpha type-6 OS=Nicotiana tabacum GN=PAA1 PE=2
SV=1
Length = 246
Score = 475 bits (1222), Expect = e-133, Method: Compositional matrix adjust.
Identities = 227/246 (92%), Positives = 237/246 (96%)
Query: 1 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKL 60
MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAG+TSIGVRGKDSVCVVTQKKVPDKL
Sbjct: 1 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSVCVVTQKKVPDKL 60
Query: 61 LDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIAD 120
LD TSV+HLFPITKYLGLLATGMTADARTLVQQAR EAAEFRFKYGYEMPVDVL+KWIAD
Sbjct: 61 LDQTSVSHLFPITKYLGLLATGMTADARTLVQQARNEAAEFRFKYGYEMPVDVLSKWIAD 120
Query: 121 KSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLE 180
KSQVYTQHAYMRPLGVVAM+L IDEE GP+LFKCDPAGHFFGHKATSAG KEQEAINFLE
Sbjct: 121 KSQVYTQHAYMRPLGVVAMILGIDEEKGPQLFKCDPAGHFFGHKATSAGSKEQEAINFLE 180
Query: 181 KKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLT 240
KKMKNDPAF+++ETVQTAIS LQSVLQEDFKASEIEVGVV KE+P FRVL+ EEIDEHLT
Sbjct: 181 KKMKNDPAFSYEETVQTAISALQSVLQEDFKASEIEVGVVKKEDPIFRVLTTEEIDEHLT 240
Query: 241 AISERD 246
AISERD
Sbjct: 241 AISERD 246
>sp|O48551|PSA6_SOYBN Proteasome subunit alpha type-6 OS=Glycine max GN=PAA1 PE=2 SV=2
Length = 246
Score = 470 bits (1210), Expect = e-132, Method: Compositional matrix adjust.
Identities = 222/246 (90%), Positives = 238/246 (96%)
Query: 1 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKL 60
MSRGSGGGY+RHITIFSPEGRLFQVEYAFKAVKAAG+TSIGVRGKDS+CVVT KKVPDKL
Sbjct: 1 MSRGSGGGYNRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSICVVTHKKVPDKL 60
Query: 61 LDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIAD 120
LD+TSVTHLFPITKYLGLLATGMTADARTLVQQAR EAAEFRF YGYEMPVDVLAKWIAD
Sbjct: 61 LDNTSVTHLFPITKYLGLLATGMTADARTLVQQARNEAAEFRFTYGYEMPVDVLAKWIAD 120
Query: 121 KSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLE 180
KSQVYTQHAYMRPLGVVAMVL ID+E GP+L+KCDPAGH+FGHKATSAGLK+QEAINFLE
Sbjct: 121 KSQVYTQHAYMRPLGVVAMVLGIDDEYGPQLYKCDPAGHYFGHKATSAGLKDQEAINFLE 180
Query: 181 KKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLT 240
KKMKNDP+FT++ETVQTAIS LQSVLQEDFKA+EIEVGVV K+NPEFRVL+ +EIDEHLT
Sbjct: 181 KKMKNDPSFTYEETVQTAISALQSVLQEDFKATEIEVGVVRKDNPEFRVLTTDEIDEHLT 240
Query: 241 AISERD 246
AISERD
Sbjct: 241 AISERD 246
>sp|O81146|PSA6A_ARATH Proteasome subunit alpha type-6-A OS=Arabidopsis thaliana GN=PAA1
PE=1 SV=2
Length = 246
Score = 455 bits (1170), Expect = e-127, Method: Compositional matrix adjust.
Identities = 212/246 (86%), Positives = 231/246 (93%)
Query: 1 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKL 60
MSRGSG GYDRHITIFSPEGRLFQVEYAFKAVK AG+TSIGVRGKDSVCVVTQKKVPDKL
Sbjct: 1 MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVKTAGITSIGVRGKDSVCVVTQKKVPDKL 60
Query: 61 LDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIAD 120
LD +SVTHLFPITKY+GL+ATG+TADAR+LVQQAR +AAEFRF YGYEMPVD+LAKWIAD
Sbjct: 61 LDQSSVTHLFPITKYIGLVATGITADARSLVQQARNQAAEFRFTYGYEMPVDILAKWIAD 120
Query: 121 KSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLE 180
KSQVYTQHAYMRPLGVVAMV+ +DEE GP L+KCDPAGHF+GHKATSAG+KEQEA+NFLE
Sbjct: 121 KSQVYTQHAYMRPLGVVAMVMGVDEENGPLLYKCDPAGHFYGHKATSAGMKEQEAVNFLE 180
Query: 181 KKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLT 240
KKMK +P+FTF ETVQTAIS LQSVLQEDFKA+EIEVGVV ENPEFR L+ EEI+EHLT
Sbjct: 181 KKMKENPSFTFDETVQTAISALQSVLQEDFKATEIEVGVVRAENPEFRALTTEEIEEHLT 240
Query: 241 AISERD 246
AISERD
Sbjct: 241 AISERD 246
>sp|O81147|PSA6B_ARATH Proteasome subunit alpha type-6-B OS=Arabidopsis thaliana GN=PAA2
PE=1 SV=1
Length = 246
Score = 452 bits (1164), Expect = e-127, Method: Compositional matrix adjust.
Identities = 213/246 (86%), Positives = 230/246 (93%)
Query: 1 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKL 60
MSRGSG GYDRHITIFSPEGRLFQVEYAFKAVKAAG+TSIGVRGKDSVCVVTQKKVPDKL
Sbjct: 1 MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSVCVVTQKKVPDKL 60
Query: 61 LDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIAD 120
LD +SV+HLFP+TKYLGLLATGMTAD+R+LVQQAR EAAEFRF+YGYEMP D+LAKWIAD
Sbjct: 61 LDQSSVSHLFPVTKYLGLLATGMTADSRSLVQQARNEAAEFRFQYGYEMPADILAKWIAD 120
Query: 121 KSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLE 180
KSQVYTQHAYMRPLGVVAMVL IDEE GP L+KCDPAGHF+GHKATSAG+KEQEA+NFLE
Sbjct: 121 KSQVYTQHAYMRPLGVVAMVLGIDEERGPLLYKCDPAGHFYGHKATSAGMKEQEAVNFLE 180
Query: 181 KKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLT 240
KKMK +PAFT+ ETVQTAIS LQSVLQEDFKA+EIEVGVV ++P FR L EEIDEHLT
Sbjct: 181 KKMKENPAFTYDETVQTAISALQSVLQEDFKATEIEVGVVRADDPLFRSLRTEEIDEHLT 240
Query: 241 AISERD 246
AISERD
Sbjct: 241 AISERD 246
>sp|Q9LSU3|PSA6_ORYSJ Proteasome subunit alpha type-6 OS=Oryza sativa subsp. japonica
GN=PAA1 PE=2 SV=1
Length = 246
Score = 445 bits (1145), Expect = e-124, Method: Compositional matrix adjust.
Identities = 212/246 (86%), Positives = 230/246 (93%)
Query: 1 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKL 60
MSRG+G GYDRHITIFSPEGRL+QVEYAFKAVK+AGVTSIGVRGKDSVCVVTQKKVPDKL
Sbjct: 1 MSRGTGAGYDRHITIFSPEGRLYQVEYAFKAVKSAGVTSIGVRGKDSVCVVTQKKVPDKL 60
Query: 61 LDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIAD 120
LDHTSVTHLFPITKY+GLLATG+TADAR+LV QAR EAAEFRFK+GYEMPVDVLAKWIAD
Sbjct: 61 LDHTSVTHLFPITKYIGLLATGLTADARSLVYQARNEAAEFRFKWGYEMPVDVLAKWIAD 120
Query: 121 KSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLE 180
K+QVYTQHAYMRPLGVVAMVL DEE +LFKCDPAGHFFGHKATSAGLKEQEAINFLE
Sbjct: 121 KAQVYTQHAYMRPLGVVAMVLGYDEEKNAQLFKCDPAGHFFGHKATSAGLKEQEAINFLE 180
Query: 181 KKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLT 240
KKMK+DP F+++ETVQ AIS LQSVLQEDFKA+EIEVGVV K++ FR L+ EEID+HLT
Sbjct: 181 KKMKDDPQFSYEETVQIAISALQSVLQEDFKATEIEVGVVRKDDRVFRALTTEEIDQHLT 240
Query: 241 AISERD 246
AISERD
Sbjct: 241 AISERD 246
>sp|Q9QUM9|PSA6_MOUSE Proteasome subunit alpha type-6 OS=Mus musculus GN=Psma6 PE=1 SV=1
Length = 246
Score = 339 bits (869), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 157/246 (63%), Positives = 203/246 (82%)
Query: 1 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKL 60
MSRGS G+DRHITIFSPEGRL+QVEYAFKA+ G+TS+ VRGKD +VTQKKVPDKL
Sbjct: 1 MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKL 60
Query: 61 LDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIAD 120
LD ++VTHLF IT+ +G + TGMTAD+R+ VQ+ARYEAA +++KYGYE+PVD+L K IAD
Sbjct: 61 LDSSTVTHLFKITESIGCVMTGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIAD 120
Query: 121 KSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLE 180
SQVYTQ+A MRPLG +++ IDEE GP+++KCDPAG++ G KAT+AG+K+ E+ +FLE
Sbjct: 121 ISQVYTQNAEMRPLGCCMILIGIDEEQGPQVYKCDPAGYYCGFKATAAGVKQTESTSFLE 180
Query: 181 KKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLT 240
KK+K +TF++TV+TAI+ L +VL DFK SEIEVGVV+ ENP+FR+L+ EID HL
Sbjct: 181 KKVKKKFDWTFEQTVETAITCLSTVLSIDFKPSEIEVGVVTVENPKFRILTEAEIDAHLV 240
Query: 241 AISERD 246
A++ERD
Sbjct: 241 ALAERD 246
>sp|P60901|PSA6_RAT Proteasome subunit alpha type-6 OS=Rattus norvegicus GN=Psma6 PE=1
SV=1
Length = 246
Score = 339 bits (869), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 157/246 (63%), Positives = 203/246 (82%)
Query: 1 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKL 60
MSRGS G+DRHITIFSPEGRL+QVEYAFKA+ G+TS+ VRGKD +VTQKKVPDKL
Sbjct: 1 MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKL 60
Query: 61 LDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIAD 120
LD ++VTHLF IT+ +G + TGMTAD+R+ VQ+ARYEAA +++KYGYE+PVD+L K IAD
Sbjct: 61 LDSSTVTHLFKITENIGCVMTGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIAD 120
Query: 121 KSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLE 180
SQVYTQ+A MRPLG +++ IDEE GP+++KCDPAG++ G KAT+AG+K+ E+ +FLE
Sbjct: 121 ISQVYTQNAEMRPLGCCMILIGIDEEQGPQVYKCDPAGYYCGFKATAAGVKQTESTSFLE 180
Query: 181 KKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLT 240
KK+K +TF++TV+TAI+ L +VL DFK SEIEVGVV+ ENP+FR+L+ EID HL
Sbjct: 181 KKVKKKFDWTFEQTVETAITCLSTVLSIDFKPSEIEVGVVTVENPKFRILTEAEIDAHLV 240
Query: 241 AISERD 246
A++ERD
Sbjct: 241 ALAERD 246
>sp|P60900|PSA6_HUMAN Proteasome subunit alpha type-6 OS=Homo sapiens GN=PSMA6 PE=1 SV=1
Length = 246
Score = 339 bits (869), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 157/246 (63%), Positives = 203/246 (82%)
Query: 1 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKL 60
MSRGS G+DRHITIFSPEGRL+QVEYAFKA+ G+TS+ VRGKD +VTQKKVPDKL
Sbjct: 1 MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKL 60
Query: 61 LDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIAD 120
LD ++VTHLF IT+ +G + TGMTAD+R+ VQ+ARYEAA +++KYGYE+PVD+L K IAD
Sbjct: 61 LDSSTVTHLFKITENIGCVMTGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIAD 120
Query: 121 KSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLE 180
SQVYTQ+A MRPLG +++ IDEE GP+++KCDPAG++ G KAT+AG+K+ E+ +FLE
Sbjct: 121 ISQVYTQNAEMRPLGCCMILIGIDEEQGPQVYKCDPAGYYCGFKATAAGVKQTESTSFLE 180
Query: 181 KKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLT 240
KK+K +TF++TV+TAI+ L +VL DFK SEIEVGVV+ ENP+FR+L+ EID HL
Sbjct: 181 KKVKKKFDWTFEQTVETAITCLSTVLSIDFKPSEIEVGVVTVENPKFRILTEAEIDAHLV 240
Query: 241 AISERD 246
A++ERD
Sbjct: 241 ALAERD 246
>sp|Q2YDE4|PSA6_BOVIN Proteasome subunit alpha type-6 OS=Bos taurus GN=PSMA6 PE=1 SV=1
Length = 246
Score = 339 bits (869), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 157/246 (63%), Positives = 203/246 (82%)
Query: 1 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKL 60
MSRGS G+DRHITIFSPEGRL+QVEYAFKA+ G+TS+ VRGKD +VTQKKVPDKL
Sbjct: 1 MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKL 60
Query: 61 LDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIAD 120
LD ++VTHLF IT+ +G + TGMTAD+R+ VQ+ARYEAA +++KYGYE+PVD+L K IAD
Sbjct: 61 LDSSTVTHLFKITENIGCVMTGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIAD 120
Query: 121 KSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLE 180
SQVYTQ+A MRPLG +++ IDEE GP+++KCDPAG++ G KAT+AG+K+ E+ +FLE
Sbjct: 121 ISQVYTQNAEMRPLGCCMILIGIDEEQGPQVYKCDPAGYYCGFKATAAGVKQTESTSFLE 180
Query: 181 KKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLT 240
KK+K +TF++TV+TAI+ L +VL DFK SEIEVGVV+ ENP+FR+L+ EID HL
Sbjct: 181 KKVKKKFDWTFEQTVETAITCLSTVLSIDFKPSEIEVGVVTVENPKFRILTEAEIDAHLV 240
Query: 241 AISERD 246
A++ERD
Sbjct: 241 ALAERD 246
>sp|O94517|PSA1_SCHPO Probable proteasome subunit alpha type-1 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPBC646.16 PE=3 SV=1
Length = 244
Score = 288 bits (737), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 139/241 (57%), Positives = 182/241 (75%), Gaps = 4/241 (1%)
Query: 8 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVT 67
G+DR IT+FSPEGRL+QVEYAFKA AG+TS+GV GK+ CV++QKKVPDKL+D ++V
Sbjct: 6 GFDRTITVFSPEGRLYQVEYAFKAFNNAGITSVGVTGKNCACVISQKKVPDKLIDASTVK 65
Query: 68 HLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQ 127
H+FPITK +G + TG ADAR V +AR EAAEF +K GY MP DVLAK +A+ +QV TQ
Sbjct: 66 HVFPITKGIGCVMTGSIADARAQVSRARSEAAEFEYKNGYPMPCDVLAKRMANIAQVSTQ 125
Query: 128 HAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND- 186
A MRPLGV ++++D+E GP LFK DPAG + G+KATSAG K+ E IN+LEK+ K D
Sbjct: 126 RAAMRPLGVAMTLVAVDDEIGPSLFKLDPAGFYIGYKATSAGPKQTETINWLEKRFKKDG 185
Query: 187 -PAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISER 245
P+ +TV+T I L S L DFK++E+++GVV + P FRVLS+EEI+ HL +I+E+
Sbjct: 186 IPS-NLTDTVETGIQALMSSLSTDFKSTELQIGVVEDDKP-FRVLSVEEIEAHLQSIAEK 243
Query: 246 D 246
D
Sbjct: 244 D 244
>sp|Q9XZJ4|PSA6_DROME Proteasome subunit alpha type-6 OS=Drosophila melanogaster
GN=Prosalpha1 PE=2 SV=2
Length = 244
Score = 285 bits (728), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 140/246 (56%), Positives = 179/246 (72%), Gaps = 2/246 (0%)
Query: 1 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKL 60
MSRGS G+DRHITIFSPEGRL+QVEYAFKA+ +T++ ++ D V TQKKV +K
Sbjct: 1 MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAIAQENITTVALKSGDCAVVATQKKVTEKN 60
Query: 61 LDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIAD 120
+ +VTHLF ITK +G TG AD+R+ VQ+ARYEAA FR+KYGYEMPVDVL + IAD
Sbjct: 61 IVPETVTHLFRITKDIGCAMTGRIADSRSQVQKARYEAANFRYKYGYEMPVDVLCRRIAD 120
Query: 121 KSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLE 180
+QVYTQ+A MRPLG ++++ D E GP ++K DPAG+F G KA S G K EA ++LE
Sbjct: 121 INQVYTQNAEMRPLGCSMVLIAYDNEIGPSVYKTDPAGYFSGFKACSVGAKTLEANSYLE 180
Query: 181 KKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLT 240
KK K P + ++ +Q AIS L SVL DFK + IE+GVVSK +P FR+L EI+EHLT
Sbjct: 181 KKYK--PNLSEEKAIQLAISCLSSVLAIDFKPNGIEIGVVSKSDPTFRILDEREIEEHLT 238
Query: 241 AISERD 246
I+E+D
Sbjct: 239 KIAEKD 244
>sp|Q54XM7|PSA6_DICDI Proteasome subunit alpha type-6 OS=Dictyostelium discoideum
GN=psmA6 PE=3 SV=1
Length = 250
Score = 277 bits (708), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 132/251 (52%), Positives = 184/251 (73%), Gaps = 6/251 (2%)
Query: 1 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKL 60
MSR GYD I IFSP+G+L+Q+EYAFKA+K G+TS+G+RGKD V V TQKK+PDKL
Sbjct: 1 MSRSGTAGYDMSI-IFSPQGKLYQIEYAFKAIKTGGLTSVGIRGKDCVVVATQKKIPDKL 59
Query: 61 LDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIAD 120
+D SVT L+ +T Y+G + TG+ D+++ +A E A F K+GY++P +VLAK +AD
Sbjct: 60 IDPKSVTSLYKLTDYIGCVQTGIVPDSKSQASRAIQECATFHHKFGYQIPPNVLAKRMAD 119
Query: 121 KSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLE 180
+Q+ TQHA RPLGV +++ ID+E GP+LFK DPAG F G+KAT+AG KEQE+ NFLE
Sbjct: 120 IAQLSTQHASARPLGVAMILIGIDDELGPQLFKVDPAGVFTGYKATAAGEKEQESTNFLE 179
Query: 181 KKMKNDPAFTFQETVQT-----AISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEI 235
KK K++P + ET+Q AISTLQSVL D K+S++E+G+ + +N +F +++ E+I
Sbjct: 180 KKFKSNPQLSKDETIQVSLIVMAISTLQSVLGADLKSSDLEIGICTMDNRKFVIMTDEDI 239
Query: 236 DEHLTAISERD 246
D LT ++ERD
Sbjct: 240 DSQLTKLAERD 250
>sp|P21243|PSA1_YEAST Proteasome subunit alpha type-1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=SCL1 PE=1 SV=1
Length = 252
Score = 244 bits (623), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 126/243 (51%), Positives = 174/243 (71%), Gaps = 7/243 (2%)
Query: 9 YDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTH 68
YDRHITIFSPEGRL+QVEYAFKA + S+ VRGKD V++QKKVPDKLLD T+V++
Sbjct: 12 YDRHITIFSPEGRLYQVEYAFKATNQTNINSLAVRGKDCTVVISQKKVPDKLLDPTTVSY 71
Query: 69 LFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQH 128
+F I++ +G++ G DAR +A+ EAAEFR+KYGY+MP DVLAK +A+ SQ+YTQ
Sbjct: 72 IFCISRTIGMVVNGPIPDARNAALRAKAEAAEFRYKYGYDMPCDVLAKRMANLSQIYTQR 131
Query: 129 AYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLE---KKMKN 185
AYMRPLGV+ +S+DEE GP ++K DPAG++ G+KAT+ G K+QE LE KK K
Sbjct: 132 AYMRPLGVILTFVSVDEELGPSIYKTDPAGYYVGYKATATGPKQQEITTNLENHFKKSKI 191
Query: 186 DPAF--TFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAIS 243
D ++++ V+ AI+ + L +F +++EVGV +K+ +F LS E I+E L AI+
Sbjct: 192 DHINEESWEKVVEFAITHMIDALGTEFSKNDLEVGVATKD--KFFTLSAENIEERLVAIA 249
Query: 244 ERD 246
E+D
Sbjct: 250 EQD 252
>sp|O17586|PSA6_CAEEL Proteasome subunit alpha type-6 OS=Caenorhabditis elegans GN=pas-1
PE=1 SV=1
Length = 246
Score = 240 bits (612), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 110/246 (44%), Positives = 171/246 (69%)
Query: 1 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKL 60
MSRGS G+DRHITIFSPEGR++QVEYAFKA+ + +T++ V+G D+ + QK+VPD L
Sbjct: 1 MSRGSSAGFDRHITIFSPEGRVYQVEYAFKAINSTNLTAVAVKGADAAVIAVQKRVPDSL 60
Query: 61 LDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIAD 120
+ +VT ++ I++ +G A GM DA+ +++A+ EAA +++K GY+MP ++LAK +AD
Sbjct: 61 IVADTVTSVYQISQSVGCCAIGMIPDAKFQIKRAQGEAASWKYKNGYDMPCELLAKKMAD 120
Query: 121 KSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLE 180
+Q YTQ+A MR LG + +S D+E GP +++ DPAG++ G K S G+K+ A +FLE
Sbjct: 121 LNQYYTQNAEMRSLGCALLFISYDDEKGPEVYRVDPAGYYRGMKGVSVGVKQLPATSFLE 180
Query: 181 KKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLT 240
KK+K T E ++ AI LQ+ L D ++ ++EV VV+K+N +F L+ ++++ HL
Sbjct: 181 KKIKKKSELTSTEAIELAIEALQTSLGIDVRSKDLEVVVVTKDNSKFTKLTSDQVEHHLN 240
Query: 241 AISERD 246
I+ RD
Sbjct: 241 QIANRD 246
>sp|Q9GU37|PSA1_TRYBB Proteasome subunit alpha type-1 OS=Trypanosoma brucei brucei PE=2
SV=1
Length = 266
Score = 186 bits (472), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 106/251 (42%), Positives = 155/251 (61%), Gaps = 11/251 (4%)
Query: 1 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKL 60
MSR G+D++IT+FSPEG L+QVEYAFKAV AG+ ++ +R KD+V V TQ VPDKL
Sbjct: 1 MSRA---GFDKYITVFSPEGSLYQVEYAFKAVTYAGLLTVAIRCKDAVLVFTQHSVPDKL 57
Query: 61 LDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIAD 120
+ ++T L+ + G+ TG D + LVQ+AR EA+E++++YG M V VLAK D
Sbjct: 58 MRPETITSLYNVNDNTGVCITGRAPDGKALVQKARNEASEYKYRYGMPMLVSVLAKPWQD 117
Query: 121 KSQVYTQHAYMRPLGVVAMVLSI--DEECG---PRLFKCDPAGHFFGHKATSAGLKEQEA 175
+QV TQ A MR +G + + + ++E G P+++ DPAG H A + G K+ EA
Sbjct: 118 MAQVRTQQAGMRLMGTIMTFVGMEQNDEDGAWIPQIYCVDPAGGAAVH-ACAVGKKQIEA 176
Query: 176 INFLEKKMKNDPAFTF--QETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIE 233
FLEKK KN P T +E A++ LQS L E +AS +EVG + ++ F +S
Sbjct: 177 CAFLEKKQKNAPFHTLSQKEAAMIALAALQSALGESLRASGVEVGRCTADDHHFLRVSDR 236
Query: 234 EIDEHLTAISE 244
E+ + LT +++
Sbjct: 237 EVKKWLTPLAK 247
>sp|Q8TYB7|PSA_METKA Proteasome subunit alpha OS=Methanopyrus kandleri (strain AV19 /
DSM 6324 / JCM 9639 / NBRC 100938) GN=psmA PE=3 SV=1
Length = 246
Score = 179 bits (453), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 98/240 (40%), Positives = 147/240 (61%), Gaps = 8/240 (3%)
Query: 9 YDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTH 68
YDR IT+FSP+GRLFQVEYA +AVK G T++G++ ++ V + K+V KL++ S+
Sbjct: 10 YDRAITVFSPDGRLFQVEYAREAVKR-GTTALGIKVEEGVVLGVDKRVTSKLIEPESIEK 68
Query: 69 LFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQH 128
++ I ++G G+ ADAR LV++AR EA +R+ YG + VDVL K I D QVYTQH
Sbjct: 69 VYQIDTHIGAATAGLVADARVLVERARIEAQTYRYTYGEPIDVDVLVKAICDLKQVYTQH 128
Query: 129 AYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPA 188
+RP G ++ +D + G RLF+ DP+G HKAT+ G QEA++ E++ + D
Sbjct: 129 GGVRPFGTALLIAGVDTK-GCRLFETDPSGALTEHKATAIGEGRQEALDVFEEEYRED-- 185
Query: 189 FTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAI--SERD 246
T QE ++ A+ L +E+ A +E+ VV K+ FR L ++I+E + SE D
Sbjct: 186 MTLQEAIELAVRALYEASREETTADNLEIAVVDKQG--FRKLERKKIEEMFERVVGSEED 243
>sp|Q8TPX5|PSA_METAC Proteasome subunit alpha OS=Methanosarcina acetivorans (strain ATCC
35395 / DSM 2834 / JCM 12185 / C2A) GN=psmA PE=3 SV=1
Length = 247
Score = 170 bits (430), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 88/238 (36%), Positives = 138/238 (57%), Gaps = 4/238 (1%)
Query: 8 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVT 67
GYDR IT+FSP+GRLFQVEYA +AVK G T++G++ D V ++ K++ +L++ S+
Sbjct: 6 GYDRAITVFSPDGRLFQVEYAREAVKR-GTTAVGIKAADGVVLLVDKRITSRLVEAESIE 64
Query: 68 HLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQ 127
+F I +++G +G+ ADAR+LV +AR EA R Y + V+V++K I D Q YTQ
Sbjct: 65 KIFQIDEHIGAATSGLVADARSLVDRARVEAQVNRVSYDEPIGVEVISKKICDHKQTYTQ 124
Query: 128 HAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDP 187
+ +RP G ++ +D+ PRLF+ DP+G +KAT+ G + E + D
Sbjct: 125 YGGVRPYGTALLIAGVDDNK-PRLFETDPSGALLEYKATAIGAGRNAVVEVFEADYRED- 182
Query: 188 AFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISER 245
+ + L + F A +EVGVVS E+ +FR L EE++ ++ I E+
Sbjct: 183 -MNMDAAILLGMDALYKAAEGKFDAGTLEVGVVSLEDKKFRKLGPEEVENYVQQILEK 239
>sp|Q469M6|PSA_METBF Proteasome subunit alpha OS=Methanosarcina barkeri (strain Fusaro /
DSM 804) GN=psmA PE=3 SV=1
Length = 249
Score = 169 bits (429), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 87/238 (36%), Positives = 139/238 (58%), Gaps = 4/238 (1%)
Query: 8 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVT 67
GYDR IT+FSP+GRLFQVEYA +AVK G T++G++ D V ++ K++ +L++ S+
Sbjct: 8 GYDRAITVFSPDGRLFQVEYAREAVKR-GTTAVGIKAADGVVLLVDKRITSRLVEAESIE 66
Query: 68 HLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQ 127
+F I ++G +G+ ADAR+LV +AR EA R Y + V+V++K I D Q YTQ
Sbjct: 67 KIFQIDDHIGAATSGLVADARSLVDRARVEAQVNRVSYDEPIGVEVISKKICDHKQTYTQ 126
Query: 128 HAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDP 187
+ +RP G ++ +D+ PRLF+ DP+G +KAT+ G + E + + D
Sbjct: 127 YGGVRPYGTALLIAGVDDNL-PRLFETDPSGALLEYKATAIGAGRNAVVEVFEAEYRQD- 184
Query: 188 AFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISER 245
+ + L + F AS +EVG+VS ++ +FR L EE++ ++ I E+
Sbjct: 185 -MNMDAAILLGMDALYRAAEGKFDASTLEVGIVSLQDKKFRKLVPEEVENYVQQILEK 241
>sp|Q8PTU1|PSA_METMA Proteasome subunit alpha OS=Methanosarcina mazei (strain ATCC
BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88)
GN=psmA PE=3 SV=1
Length = 249
Score = 168 bits (425), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 88/238 (36%), Positives = 137/238 (57%), Gaps = 4/238 (1%)
Query: 8 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVT 67
GYDR IT+FSP+GRLFQVEYA +AVK G T++G++ D V ++ K++ +L++ S+
Sbjct: 8 GYDRAITVFSPDGRLFQVEYAREAVKR-GTTAVGIKAADGVVLLVDKRITSRLVEAESIE 66
Query: 68 HLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQ 127
+F I ++G +G+ ADAR+LV +AR EA R Y + V+V++K I D Q YTQ
Sbjct: 67 KIFQIDDHIGAATSGLVADARSLVDRARVEAQVNRVSYDELIGVEVISKKICDHKQTYTQ 126
Query: 128 HAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDP 187
+ +RP G ++ +D+ PRLF+ DP+G +KAT+ G + E + D
Sbjct: 127 YGGVRPYGTALLIAGVDDNK-PRLFETDPSGALLEYKATAIGAGRNAVVEVFEADYRED- 184
Query: 188 AFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISER 245
+ + L + F A +EVGVVS E+ +FR L EE++ ++ I E+
Sbjct: 185 -MNIDAAILLGMDALYKAAEGKFDAGTLEVGVVSLEDKKFRKLGPEEVENYVHQILEK 241
>sp|Q59565|PSA_METTE Proteasome subunit alpha OS=Methanosarcina thermophila GN=psmA PE=3
SV=1
Length = 247
Score = 167 bits (423), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 88/238 (36%), Positives = 137/238 (57%), Gaps = 4/238 (1%)
Query: 8 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVT 67
GYDR IT+FSP+GRLFQVEYA +AVK G T++G++ D V ++ K++ +L++ S+
Sbjct: 6 GYDRAITVFSPDGRLFQVEYAREAVKR-GTTAVGIKAADGVVLLVDKRITSRLVEAESIE 64
Query: 68 HLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQ 127
+F I ++G +G+ ADAR LV +AR EA R Y + V+V++K I D Q YTQ
Sbjct: 65 KIFQIDDHIGAATSGLVADARALVDRARVEAQVNRVSYDELIGVEVISKKICDHKQTYTQ 124
Query: 128 HAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDP 187
+ +RP G ++ +D++ PRLF+ DP+G +KAT+ G + E K D
Sbjct: 125 YGGVRPYGTALLIAGVDDKR-PRLFETDPSGALLEYKATAIGAGRNAVVEVFEADYKED- 182
Query: 188 AFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISER 245
+ + + L + F A +EVGVVS ++ +FR L EE+ ++ I E+
Sbjct: 183 -MNIEAAILLGMDALYKAAEGKFDAGTLEVGVVSLQDKKFRKLEPEEVGNYVQQILEK 239
>sp|Q60177|PSA_METJA Proteasome subunit alpha OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=psmA PE=1 SV=1
Length = 261
Score = 167 bits (423), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 87/227 (38%), Positives = 137/227 (60%), Gaps = 5/227 (2%)
Query: 8 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVT 67
YDR IT+FSPEGRL+QVEYA +AV+ G T+IG+ KD V + +++ KL+ S+
Sbjct: 8 AYDRAITVFSPEGRLYQVEYAREAVRR-GTTAIGIACKDGVVLAVDRRITSKLVKIRSIE 66
Query: 68 HLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQ 127
+F I ++ +G+ ADAR L+ +AR EA +R YG E+ +++LAK I D Q YTQ
Sbjct: 67 KIFQIDDHVAAATSGLVADARVLIDRARLEAQIYRLTYGEEISIEMLAKKICDIKQAYTQ 126
Query: 128 HAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDP 187
H +RP GV ++ ID+ RLF+ DP+G +KAT+ G + LEK+ ++D
Sbjct: 127 HGGVRPFGVSLLIAGIDKN-EARLFETDPSGALIEYKATAIGSGRPVVMELLEKEYRDD- 184
Query: 188 AFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEE 234
T E ++ AI+ L ED K ++V +++ ++ +F+ + +EE
Sbjct: 185 -ITLDEGLELAITALTKA-NEDIKPENVDVCIITVKDAQFKKIPVEE 229
>sp|C6A459|PSA_THESM Proteasome subunit alpha OS=Thermococcus sibiricus (strain MM 739 /
DSM 12597) GN=psmA PE=3 SV=1
Length = 260
Score = 166 bits (419), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 89/233 (38%), Positives = 144/233 (61%), Gaps = 6/233 (2%)
Query: 7 GGYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSV 66
GYDR IT+FSP+GRLFQV+YA +AVK G T++GV+ KD V + +K+V KL++ S
Sbjct: 8 AGYDRAITVFSPDGRLFQVQYAREAVKR-GATAVGVKCKDGVVLAVEKRVTSKLIEPESY 66
Query: 67 THLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYT 126
+F I ++ ++G+ ADAR LV +AR EA +R YG +P+ VL K I D Q++T
Sbjct: 67 EKIFQIDDHIAAASSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQMHT 126
Query: 127 QHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 186
Q+ +RP G ++ ++E+ P LF+ DP+G +F KA + G A+ E+K +++
Sbjct: 127 QYGGVRPFGAALLMAGVNEK--PELFETDPSGAYFEWKAVAIGSGRNTAMAIFEEKYRDE 184
Query: 187 PAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHL 239
T +E ++ A+ L +++E S IEV V+S + +F+ ++ EE+ + L
Sbjct: 185 --MTLEEAIKLAVLALSKIMEEPSPES-IEVAVISVKEKKFKKITPEEVAKCL 234
>sp|O59219|PSA_PYRHO Proteasome subunit alpha OS=Pyrococcus horikoshii (strain ATCC
700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=psmA PE=3 SV=1
Length = 260
Score = 163 bits (413), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 86/234 (36%), Positives = 142/234 (60%), Gaps = 6/234 (2%)
Query: 7 GGYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSV 66
GYDR IT+FSP+GRLFQV YA +AVK G T++GV+ + V + +K++ +L++ S
Sbjct: 8 AGYDRAITVFSPDGRLFQVNYAREAVKR-GATAVGVKCNEGVVLAVEKRITSRLIEPESY 66
Query: 67 THLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYT 126
+F I ++ ++G+ ADAR LV +AR EA R YG P+ V+ K I D Q++T
Sbjct: 67 EKIFQIDDHIAAASSGIIADARVLVNRARLEAQIHRLTYGEPAPLAVIVKKICDLKQMHT 126
Query: 127 QHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 186
Q+ +RP G ++ ++E+ P L++ DP+G +F KA + G A+ E+K K+D
Sbjct: 127 QYGGVRPFGAALLMAGVNEK--PELYETDPSGAYFAWKAVAIGSGRNTAMAIFEEKYKDD 184
Query: 187 PAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLT 240
+ +E ++ AI L +++ A IEV +++ ++ +FR LS EEI+++L
Sbjct: 185 --MSLEEAIKLAIFALAKTMEKP-SAENIEVAIITVKDKKFRKLSREEIEKYLN 235
>sp|Q9V122|PSA_PYRAB Proteasome subunit alpha OS=Pyrococcus abyssi (strain GE5 / Orsay)
GN=psmA PE=3 SV=1
Length = 260
Score = 163 bits (413), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 88/233 (37%), Positives = 140/233 (60%), Gaps = 6/233 (2%)
Query: 7 GGYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSV 66
GYDR IT+FSP+GRLFQV YA +AVK G T++GV+ KD V + +K++ +L++ S
Sbjct: 8 AGYDRAITVFSPDGRLFQVNYAREAVKR-GATAVGVKCKDGVVLAVEKRITSRLIEPESY 66
Query: 67 THLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYT 126
+F I ++ ++G+ ADAR LV +AR EA R YG P+ V+ K I D Q++T
Sbjct: 67 EKIFQIDDHIAAASSGIIADARVLVNRARLEAQIHRLTYGEPAPLAVIVKKICDLKQMHT 126
Query: 127 QHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 186
Q+ +RP G ++ ++++ P L++ DP+G +F KA + G A+ E K ++D
Sbjct: 127 QYGGVRPFGAALLMAGVNDK--PELYETDPSGAYFAWKAVAIGSGRNTAMAIFEDKYRDD 184
Query: 187 PAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHL 239
T E ++ AI L +++ A IEV V++ ++ +FR LS EEI++ L
Sbjct: 185 --MTLDEAIKLAIFALAKTMEKP-SAENIEVAVITVKDKKFRKLSKEEIEKFL 234
>sp|A4FZT6|PSA_METM5 Proteasome subunit alpha OS=Methanococcus maripaludis (strain C5 /
ATCC BAA-1333) GN=psmA PE=3 SV=1
Length = 259
Score = 162 bits (411), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 90/235 (38%), Positives = 135/235 (57%), Gaps = 5/235 (2%)
Query: 8 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVT 67
GYDR ITIFSPEGRL+QVEYA +AV+ G T++G++ KD V + +++ KL+D +S+
Sbjct: 9 GYDRAITIFSPEGRLYQVEYAREAVRR-GTTAVGIKCKDGVVLAVDRRITSKLIDVSSIE 67
Query: 68 HLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQ 127
+F I ++ +G+ ADAR L+ +AR EA R YG + V+ LAK I D Q YTQ
Sbjct: 68 KIFQIDDHIVAATSGLVADARVLIDRARLEAQMNRISYGEAITVEALAKKICDIKQAYTQ 127
Query: 128 HAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDP 187
H RP G+ ++ ID RLF+ DP+G +KAT+ G A+ LE K D
Sbjct: 128 HGGARPFGLALLITGIDRHSA-RLFETDPSGALIEYKATAIGSGRPIAMEVLESKYSED- 185
Query: 188 AFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAI 242
T E ++ A+ L S E+ K I++ +V +S++EI++ + A+
Sbjct: 186 -MTVNEGMELALYAL-SKTTEELKPENIDMAIVKDSGKLVEKISVDEIEKIVKAV 238
>sp|Q8U0L6|PSA_PYRFU Proteasome subunit alpha OS=Pyrococcus furiosus (strain ATCC 43587
/ DSM 3638 / JCM 8422 / Vc1) GN=psmA PE=3 SV=1
Length = 260
Score = 162 bits (410), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 84/234 (35%), Positives = 142/234 (60%), Gaps = 6/234 (2%)
Query: 7 GGYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSV 66
GYDR IT+FSP+GRLFQV YA +AVK G T++GV+ + V + +K++ +L++ S
Sbjct: 8 AGYDRAITVFSPDGRLFQVNYAREAVKR-GATAVGVKCGEGVVLAVEKRITSRLIEPDSY 66
Query: 67 THLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYT 126
+F I ++ ++G+ ADAR LV +AR EA +R YG PV V+ K I D Q++T
Sbjct: 67 EKIFQIDDHIAAASSGIIADARVLVNRARLEAQIYRLTYGEPAPVSVIVKKICDLKQMHT 126
Query: 127 QHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 186
Q+ +RP G ++ I++ P L++ DP+G +F KA + G A+ E+K ++D
Sbjct: 127 QYGGVRPFGAALLMAGINDR--PELYETDPSGAYFAWKAVAIGSGRNTAMAIFEEKYRDD 184
Query: 187 PAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLT 240
++ ++ A+ L + E+ A IEV V++ ++ +FR L+ +EI+++L+
Sbjct: 185 --MNLEDAIKLALMALAKTM-ENPSADNIEVAVITVKDKKFRKLTRDEIEKYLS 235
>sp|A6VIP0|PSA_METM7 Proteasome subunit alpha OS=Methanococcus maripaludis (strain C7 /
ATCC BAA-1331) GN=psmA PE=3 SV=1
Length = 259
Score = 162 bits (410), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 90/235 (38%), Positives = 135/235 (57%), Gaps = 5/235 (2%)
Query: 8 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVT 67
GYDR ITIFSPEGRL+QVEYA +AV+ G T++G++ KD V + +++ KL+D +S+
Sbjct: 9 GYDRAITIFSPEGRLYQVEYAREAVRR-GTTAVGIKCKDGVVLAVDRRITSKLIDVSSIE 67
Query: 68 HLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQ 127
+F I ++ +G+ ADAR L+ +AR EA R YG + V+ LAK I D Q YTQ
Sbjct: 68 KIFQIDDHIVAATSGLVADARVLIDRARLEAQMNRISYGEAITVEALAKKICDIKQAYTQ 127
Query: 128 HAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDP 187
H RP G+ ++ ID RLF+ DP+G +KAT+ G A+ LE K D
Sbjct: 128 HGGARPFGLALLITGIDRHSA-RLFETDPSGALIEYKATAIGSGRPIAMEVLESKY--DE 184
Query: 188 AFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAI 242
T E ++ A+ L S E+ K I++ +V +S++EI++ + A+
Sbjct: 185 NMTVNEGMELALYAL-SKTTEELKPENIDMAIVKDSGKLVEKISVDEIEKIVKAV 238
>sp|Q6M0L9|PSA_METMP Proteasome subunit alpha OS=Methanococcus maripaludis (strain S2 /
LL) GN=psmA PE=3 SV=1
Length = 259
Score = 160 bits (406), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 89/235 (37%), Positives = 135/235 (57%), Gaps = 5/235 (2%)
Query: 8 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVT 67
GYDR ITIFSPEGRL+QVEYA +AV+ G T++G++ KD V + +++ KL+D +S+
Sbjct: 9 GYDRAITIFSPEGRLYQVEYAREAVRR-GTTAVGIKCKDGVVLAVDRRITSKLIDVSSIE 67
Query: 68 HLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQ 127
+F I ++ +G+ ADAR L+ +AR EA R YG + V+ LAK I D Q YTQ
Sbjct: 68 KIFQIDDHIVAATSGLVADARVLIDRARIEAQMNRVSYGEAITVEALAKKICDIKQAYTQ 127
Query: 128 HAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDP 187
H RP G+ ++ ID RLF+ DP+G +KAT+ G A+ LE K D
Sbjct: 128 HGGARPFGLALLITGIDRHSA-RLFETDPSGALIEYKATAIGSGRPIAMEVLESKY--DE 184
Query: 188 AFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAI 242
T E ++ A+ L S E+ K I++ ++ +S++EI++ + A+
Sbjct: 185 NMTVSEGMELALYAL-SKTTEELKPENIDMAIIKDSGKLVEKISVDEIEKIVKAV 238
>sp|O26782|PSA_METTH Proteasome subunit alpha OS=Methanothermobacter thermautotrophicus
(strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
/ Delta H) GN=psmA PE=3 SV=1
Length = 248
Score = 159 bits (403), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 135/232 (58%), Gaps = 4/232 (1%)
Query: 8 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVT 67
GYDR IT+FSP+GRLFQVEYA +AVK G TS+GV+ K+ + +V K+ KL++ S+
Sbjct: 8 GYDRAITVFSPDGRLFQVEYAREAVKR-GTTSLGVKSKEGIVLVVDKRPTSKLVEPKSIE 66
Query: 68 HLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQ 127
+F I +++G +G+ ADAR ++++AR EA R Y + V+ LAK I D Q+YTQ
Sbjct: 67 KIFQIDEHIGAATSGLVADARAIIEKARLEAQINRITYNEPIRVESLAKKICDMKQMYTQ 126
Query: 128 HAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDP 187
H +RP G ++ ++ G RLF+ DP+G +KAT+ G A+ EKK +D
Sbjct: 127 HGGVRPFGTALIIGGVNGR-GCRLFETDPSGALIEYKATAIGAGRPAAMEEFEKKYSDD- 184
Query: 188 AFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHL 239
+ ++ A+ + + +E+ V+ + ++R L +EI +H+
Sbjct: 185 -MNLNQAIELALDAVYEATEGKTTPESVEIAVIEAADKKYRRLPDDEIRDHV 235
>sp|B8GEZ3|PSA_METPE Proteasome subunit alpha OS=Methanosphaerula palustris (strain ATCC
BAA-1556 / DSM 19958 / E1-9c) GN=psmA PE=3 SV=1
Length = 241
Score = 159 bits (403), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 80/237 (33%), Positives = 139/237 (58%), Gaps = 4/237 (1%)
Query: 8 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVT 67
GYDR IT+FSP+GRL+QVEYA +AVK G T++G++ D + ++ K+V KLL+ +S+
Sbjct: 8 GYDRAITVFSPDGRLYQVEYAREAVKR-GTTAVGIKCNDGIVLLVDKRVNSKLLEPSSIE 66
Query: 68 HLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQ 127
+F I ++G+ ++G+ DAR+LV +AR E+ R Y ++ V++L+K + D Q YTQ
Sbjct: 67 KIFKIDNHIGVASSGLVGDARSLVDRARVESQVNRVSYDEQIDVEMLSKKLCDHMQTYTQ 126
Query: 128 HAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDP 187
RP G ++ I + RLF+ DP+G +KAT G+ + E++ +P
Sbjct: 127 FGGARPYGTALLIAGI-SDGQFRLFETDPSGTLLEYKATGIGIGRNAVMKVFEEEY--NP 183
Query: 188 AFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISE 244
+ ++ + + L + + F + +E+GVV+ + P FR +S +E+ + I +
Sbjct: 184 EASIRDAILLGLKALHAATEGKFDVNTVEIGVVNNDTPAFRKMSRQEVASFVEQIEQ 240
>sp|O29760|PSA_ARCFU Proteasome subunit alpha OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=psmA PE=1 SV=1
Length = 246
Score = 159 bits (401), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 86/238 (36%), Positives = 140/238 (58%), Gaps = 5/238 (2%)
Query: 8 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVT 67
GYDR IT+FSP+GRLFQVEYA +AVK G T+IG++ K+ V ++ K+V KLL+ ++
Sbjct: 7 GYDRAITVFSPDGRLFQVEYAREAVKR-GATAIGIKCKEGVILIADKRVGSKLLEADTIE 65
Query: 68 HLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQ 127
++ I +++ +G+ ADAR L+ +AR EA R Y + V LAK I D Q YTQ
Sbjct: 66 KIYKIDEHICAATSGLVADARVLIDRARIEAQINRLTYDEPITVKELAKKICDFKQQYTQ 125
Query: 128 HAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDP 187
+ +RP GV ++ +DE P+L++ DP+G +KAT+ G+ F EK+ ++D
Sbjct: 126 YGGVRPFGVSLLIAGVDEV--PKLYETDPSGALLEYKATAIGMGRNAVTEFFEKEYRDD- 182
Query: 188 AFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISER 245
+F + + + + ++ + IEVG V ++ F+ +S EE+ ++ +ER
Sbjct: 183 -LSFDDAMVLGLVAMGLSIESELVPENIEVGYVKVDDRTFKEVSPEELKPYVERANER 239
>sp|A9A846|PSA_METM6 Proteasome subunit alpha OS=Methanococcus maripaludis (strain C6 /
ATCC BAA-1332) GN=psmA PE=3 SV=1
Length = 259
Score = 158 bits (399), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 88/235 (37%), Positives = 133/235 (56%), Gaps = 5/235 (2%)
Query: 8 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVT 67
GYDR ITIFSPEGRL+QVEYA +AV+ G T++G++ D V + +++ KL+D +S+
Sbjct: 9 GYDRAITIFSPEGRLYQVEYAREAVRR-GTTAVGIKCNDGVVLAVDRRITSKLIDVSSIE 67
Query: 68 HLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQ 127
+F I ++ +G+ ADAR L+ +AR EA R YG + V+ LAK I D Q YTQ
Sbjct: 68 KIFQIDDHIVAATSGLVADARVLIDRARLEAQMNRISYGEAITVEALAKKICDIKQAYTQ 127
Query: 128 HAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDP 187
H RP G+ ++ ID RLF+ DP+G +KAT+ G A+ LE K D
Sbjct: 128 HGGARPFGLALLITGIDRHSA-RLFETDPSGALIEYKATAIGSGRPIAMEVLESKY--DE 184
Query: 188 AFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAI 242
E ++ A+ L S E+ K I++ +V +S++EI++ + A+
Sbjct: 185 NMIVSEGMELALYAL-SKTTEELKPENIDMAIVKDSGKLVEKISVDEIEKIVKAV 238
>sp|A4YCU9|PSA_METS5 Proteasome subunit alpha OS=Metallosphaera sedula (strain ATCC
51363 / DSM 5348) GN=psmA PE=3 SV=1
Length = 240
Score = 157 bits (397), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 87/237 (36%), Positives = 140/237 (59%), Gaps = 7/237 (2%)
Query: 8 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVT 67
GYDR ITIFSP+G L+QV+YAF+AVK G T++GV+ K++V ++ +KK +LLD S+
Sbjct: 9 GYDRAITIFSPDGSLYQVDYAFEAVKK-GWTTLGVKTKNAVVILGEKKKASQLLDVDSIE 67
Query: 68 HLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQ 127
+F + ++G G+ +D R L+ AR + + R Y + +D L K I+D Q+YTQ
Sbjct: 68 KVFLLDDHVGCSFAGLASDGRILIDYARNSSLQHRLVYDEPISIDYLTKLISDVKQMYTQ 127
Query: 128 HAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDP 187
H +RP GV +V +D +LF +P+G F ++A + G A ++LEK K D
Sbjct: 128 HGGVRPFGVALIVGGVDRGV-TKLFMTEPSGQFMPYQAVAIGQGGYNATDYLEKNYKED- 185
Query: 188 AFTFQETVQTAISTLQSVLQ--EDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAI 242
+ +ET+ A++ L+ L+ E +E+G +KE +FR +++EE +L I
Sbjct: 186 -LSVEETILLALNALKVTLKPGEKLGPGNVEIGFATKEG-QFRKMTLEERANYLQKI 240
>sp|Q97BZ8|PSA_THEVO Proteasome subunit alpha OS=Thermoplasma volcanium (strain ATCC
51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1) GN=psmA
PE=3 SV=2
Length = 233
Score = 157 bits (397), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 92/234 (39%), Positives = 141/234 (60%), Gaps = 11/234 (4%)
Query: 9 YDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTH 68
YDR IT+FSP+GRLFQVEYA +AVK G T++G++ + V +++ KK+ KL++ S+
Sbjct: 8 YDRAITVFSPDGRLFQVEYAREAVKK-GSTALGLKFSNGVLLISDKKIRSKLIEQNSLEK 66
Query: 69 LFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQH 128
+ I Y+ + +G+ ADAR L+ AR A + + YG + ++ L K +AD+ Q YTQ+
Sbjct: 67 IQLIDDYVAAVTSGLVADARVLIDFARISAQQEKVTYGSLVNIENLVKRVADQMQQYTQY 126
Query: 129 AYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPA 188
+RP GV + ID + GPRLF CDPAG +KAT+ G + ++FLEK+ K
Sbjct: 127 GGVRPYGVSLIFAGID-QIGPRLFDCDPAGTINEYKATAIGSGKDAVVSFLEKEYKE--G 183
Query: 189 FTFQETVQTAISTLQSVLQ--EDFKASEI-EVGVVSKENPEFRVLSIEEIDEHL 239
+ +E V I L++ L+ E+ KA EI + V SK +R+ EE+ + L
Sbjct: 184 LSEKEAVTLGIKALKASLEEGEELKAPEIASITVGSK----YRIYGAEEVKKFL 233
>sp|O24733|PSA_THEK1 Proteasome subunit alpha OS=Thermococcus sp. (strain KS-1) GN=psmA
PE=3 SV=1
Length = 260
Score = 157 bits (397), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 87/236 (36%), Positives = 138/236 (58%), Gaps = 6/236 (2%)
Query: 7 GGYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSV 66
GYDR IT+FSP+GRLFQV YA +AVK G T++GV+ KD V + +K++ KL++ +S
Sbjct: 8 AGYDRAITVFSPDGRLFQVNYAREAVKR-GATAVGVKWKDGVVLAVEKRITSKLIEPSSY 66
Query: 67 THLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYT 126
+F I ++ +G+ ADAR LV +AR EA +R YG +P+ VL K I D Q +T
Sbjct: 67 EKIFLIDDHIAAAPSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQAHT 126
Query: 127 QHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 186
Q+ +RP G ++ ++E+ P LF+ DP+G +F KA + G A+ E+ ++D
Sbjct: 127 QYGGVRPFGAALLMAGVNEK--PELFETDPSGAYFEWKAVAIGSGRNTAMAIFEEHYRDD 184
Query: 187 PAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAI 242
+ ++ AI L L+E A IEV ++ + ++ L EE++++L I
Sbjct: 185 --IGKDDAIKLAILALAKTLEEP-TAEGIEVAYITMDEKRWKKLPREELEKYLNEI 237
>sp|P25156|PSA_THEAC Proteasome subunit alpha OS=Thermoplasma acidophilum (strain ATCC
25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)
GN=psmA PE=1 SV=2
Length = 233
Score = 156 bits (395), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 91/233 (39%), Positives = 139/233 (59%), Gaps = 9/233 (3%)
Query: 9 YDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTH 68
YDR IT+FSP+GRLFQVEYA +AVK G T++G++ + V +++ KKV +L++ S+
Sbjct: 8 YDRAITVFSPDGRLFQVEYAREAVKK-GSTALGMKFANGVLLISDKKVRSRLIEQNSIEK 66
Query: 69 LFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQH 128
+ I Y+ + +G+ ADAR LV AR A + + YG + ++ L K +AD+ Q YTQ+
Sbjct: 67 IQLIDDYVAAVTSGLVADARVLVDFARISAQQEKVTYGSLVNIENLVKRVADQMQQYTQY 126
Query: 129 AYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPA 188
+RP GV + ID + GPRLF CDPAG +KAT+ G + ++FLE++ K +
Sbjct: 127 GGVRPYGVSLIFAGID-QIGPRLFDCDPAGTINEYKATAIGSGKDAVVSFLEREYKEN-- 183
Query: 189 FTFQETVQTAISTLQSVLQ--EDFKASEIEVGVVSKENPEFRVLSIEEIDEHL 239
+E V I L+S L+ E+ KA EI V ++R+ EE+ + L
Sbjct: 184 LPEKEAVTLGIKALKSSLEEGEELKAPEIASITVGN---KYRIYDQEEVKKFL 233
>sp|A3CW55|PSA_METMJ Proteasome subunit alpha OS=Methanoculleus marisnigri (strain ATCC
35101 / DSM 1498 / JR1) GN=psmA PE=3 SV=1
Length = 240
Score = 156 bits (395), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 86/238 (36%), Positives = 134/238 (56%), Gaps = 6/238 (2%)
Query: 8 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVT 67
GYDR IT+FSP+GRL+QVEYA +AVK G T++G++ + V ++ K+V +LL+ S+
Sbjct: 8 GYDRAITVFSPDGRLYQVEYAREAVKR-GTTAVGIKCSEGVVLIVDKRVTSRLLEPVSIE 66
Query: 68 HLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQ 127
+F I ++G+ ++G+ DAR+LV +AR E+ R Y + V++LAK + D Q YTQ
Sbjct: 67 KIFKIDAHIGVASSGLVGDARSLVDRARVESQINRVSYNEPINVEILAKKLCDHMQTYTQ 126
Query: 128 HAYMRPLGVVAMVLSI-DEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 186
RP G ++ + D E RLF+ DP+G +KAT G I E + + D
Sbjct: 127 FGGARPYGTALLIAGVSDGEA--RLFETDPSGTLLEYKATGIGTGRPAVIKTFEDEYQED 184
Query: 187 PAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISE 244
F+ ++ I L + + S IE+GVVS E EFR + +E+ ++ E
Sbjct: 185 ADFS--GAIRLGIKALHAATEGKLDVSAIEIGVVSIETGEFRKMEKDEVKAYVDQFEE 240
>sp|Q5JIU9|PSA_PYRKO Proteasome subunit alpha OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=psmA PE=3 SV=1
Length = 260
Score = 156 bits (394), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 86/236 (36%), Positives = 138/236 (58%), Gaps = 6/236 (2%)
Query: 7 GGYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSV 66
GYDR IT+FSP+GRLFQV YA +AVK G T++GV+ KD V + +K++ KL++ +S
Sbjct: 8 AGYDRAITVFSPDGRLFQVNYAREAVKR-GATAVGVKWKDGVVLAVEKRITSKLIEPSSY 66
Query: 67 THLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYT 126
+F I ++ +G+ ADAR LV +AR EA +R YG +P+ VL K I D Q +T
Sbjct: 67 EKIFLIDDHIAAAPSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQAHT 126
Query: 127 QHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 186
Q+ +RP G ++ ++E+ P LF+ DP+G +F KA + G A+ E+ ++D
Sbjct: 127 QYGGVRPFGAALLMAGVNEK--PELFETDPSGAYFEWKAVAIGSGRNTAMAIFEEHYRDD 184
Query: 187 PAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAI 242
+ ++ AI L L+E A IEV ++ + ++ L EE+++++ I
Sbjct: 185 --IGKDDAIKLAILALAKTLEEP-TAEGIEVAYITMDEKRWKKLPREELEKYINEI 237
>sp|Q6L0W3|PSA_PICTO Proteasome subunit alpha OS=Picrophilus torridus (strain ATCC
700027 / DSM 9790 / JCM 10055 / NBRC 100828) GN=psmA
PE=3 SV=1
Length = 234
Score = 155 bits (393), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 86/232 (37%), Positives = 137/232 (59%), Gaps = 5/232 (2%)
Query: 9 YDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTH 68
YDR IT+FSP+GRLFQVEYA +AVK G T++G++ KD V ++++KKV +L++ TS+
Sbjct: 8 YDRAITVFSPDGRLFQVEYAREAVKK-GSTALGIKFKDGVALISEKKVRSRLVEKTSLEK 66
Query: 69 LFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQH 128
+ I + + +G+ ADAR L+ AR + + YG M ++ L K +AD+ Q YTQ+
Sbjct: 67 IQLIDDRVAAVTSGLVADARVLIDFARISDQQEKVTYGSLMNIENLVKRVADQMQQYTQY 126
Query: 129 AYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPA 188
+RP GV + +D GPRLF CDPAG +K S G + + +LEK+ K +
Sbjct: 127 GGVRPYGVSIIFAGLD-SIGPRLFDCDPAGTINEYKCVSIGAGKDQVTAYLEKEYKEN-- 183
Query: 189 FTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLT 240
+ E ++ I+ L+S + ++ E E+ + K F V + EE+ ++L
Sbjct: 184 LSEDEAIRMGIAALKSAVADESSMKEPEIASI-KMGETFHVFTSEEVSKYLN 234
>sp|Q9UXC6|PSA_SULSO Proteasome subunit alpha OS=Sulfolobus solfataricus (strain ATCC
35092 / DSM 1617 / JCM 11322 / P2) GN=psmA PE=3 SV=1
Length = 241
Score = 155 bits (392), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 86/234 (36%), Positives = 134/234 (57%), Gaps = 6/234 (2%)
Query: 8 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVT 67
GYDR ITIFSP+G L+QV+YAF+AVK G T+IG++ K SV + ++K+ LLD S+
Sbjct: 9 GYDRAITIFSPDGSLYQVDYAFEAVKK-GWTAIGIKSKSSVVIASEKRKAQSLLDVDSIE 67
Query: 68 HLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQ 127
+F I ++G G+ +D R L+ AR A + R Y + +D L K +AD Q+YTQ
Sbjct: 68 KVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQ 127
Query: 128 HAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDP 187
H +RP GV ++ ID+ P+LF +P+G + ++A + G A FLEK K D
Sbjct: 128 HGGVRPFGVALVIAGIDKSV-PKLFMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKED- 185
Query: 188 AFTFQETVQTAISTLQSVLQ--EDFKASEIEVGVVSKENPEFRVLSIEEIDEHL 239
+ET+ A+ L + L+ E + +E+G S + F ++ E+ + +L
Sbjct: 186 -LNVEETILLALKALSATLKPNEKLTPNTVEIGYASTQTGLFLKMTNEDKNMYL 238
>sp|A6URN9|PSA_METVS Proteasome subunit alpha OS=Methanococcus vannielii (strain SB /
ATCC 35089 / DSM 1224) GN=psmA PE=3 SV=1
Length = 259
Score = 154 bits (390), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 87/232 (37%), Positives = 131/232 (56%), Gaps = 5/232 (2%)
Query: 6 GGGYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTS 65
GYDR ITIFSPEGRL+QVEYA +AV+ G T++G++ KD V + +++ KL+D +S
Sbjct: 7 ASGYDRAITIFSPEGRLYQVEYAREAVRR-GTTAVGIKCKDGVVLAVDRRITSKLIDVSS 65
Query: 66 VTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVY 125
+ +F I ++ +G+ ADAR L+ +AR EA R YG + V+ LAK I D Q Y
Sbjct: 66 IEKIFQIDDHIVAATSGLVADARVLIDRARVEAQVNRISYGEAITVEALAKKICDIKQAY 125
Query: 126 TQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKN 185
T H RP G+ ++ ID RLF+ DP+G +KAT+ G A+ LE+K
Sbjct: 126 THHGGARPFGLALLITGIDRHSA-RLFETDPSGALIEYKATAIGSGRPVAMEILEEKY-- 182
Query: 186 DPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDE 237
D + E ++ AI L S E+ K I++ +V +++ EI++
Sbjct: 183 DENMSVSEGMELAIYAL-SKTTEELKPENIDMAIVKDTGKLVEKITVFEIEK 233
>sp|A7I9C7|PSA_METB6 Proteasome subunit alpha OS=Methanoregula boonei (strain 6A8)
GN=psmA PE=3 SV=1
Length = 240
Score = 154 bits (389), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 79/232 (34%), Positives = 133/232 (57%), Gaps = 4/232 (1%)
Query: 8 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVT 67
GYDR IT+FSP+GRL+QVEYA +AVK G T++G++ D V ++ K+V KLL+ +S+
Sbjct: 8 GYDRAITVFSPDGRLYQVEYAREAVKR-GTTAVGIKAHDGVVLIVDKRVSSKLLESSSIE 66
Query: 68 HLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQ 127
+F I +++G+ ++G+ DAR LV +AR E R Y + V+ LAK + D Q TQ
Sbjct: 67 KIFKIDEHIGVASSGLVGDARALVDRARIECQINRVSYDERIEVEALAKKLCDHMQTLTQ 126
Query: 128 HAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDP 187
+ +RP G ++ + + RLF+ DP+G +KAT G+ A+ E++ D
Sbjct: 127 YGGIRPYGTALLIAGV-SDGESRLFETDPSGTLLEYKATGIGIGRPAAMKVFEEEYTADL 185
Query: 188 AFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHL 239
A ++ + + L S + F +E+G+V +F+ ++ EE+ ++
Sbjct: 186 A--LKDAILLGLKALHSATEGKFDVDTVEMGIVESSTAQFKKMTKEEVASYV 235
>sp|Q975G5|PSA_SULTO Proteasome subunit alpha OS=Sulfolobus tokodaii (strain DSM 16993 /
JCM 10545 / NBRC 100140 / 7) GN=psmA PE=3 SV=2
Length = 242
Score = 154 bits (389), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 85/229 (37%), Positives = 128/229 (55%), Gaps = 5/229 (2%)
Query: 8 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVT 67
GYDR ITIFSP+G L+QV+YAF+AVK G T++GV+ K V ++ +K+ +LLD S+
Sbjct: 9 GYDRAITIFSPDGSLYQVDYAFEAVKK-GWTTLGVKTKAGVVLIGEKRKATQLLDVDSIE 67
Query: 68 HLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQ 127
+F + ++G G+ +D R L+ AR +A + R Y + +D L K ++D Q+YTQ
Sbjct: 68 KVFILDDHVGCSFAGLASDGRILIDYARSQALQHRLIYDEPINIDYLTKLVSDVKQMYTQ 127
Query: 128 HAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDP 187
H +RP GV ++ ID P+L +P+G F + A + G A + EK + D
Sbjct: 128 HGGVRPFGVALIIGGIDRGKTPKLLMTEPSGQFMPYYAVAIGQGGYTATEYFEKNYRED- 186
Query: 188 AFTFQETVQTAISTLQSVLQ--EDFKASEIEVGVVSKENPEFRVLSIEE 234
Q+T+ I L S L+ E S IEVG ++ FR +S EE
Sbjct: 187 -LNMQDTILLGIRALASTLKPGEKLAPSNIEVGFADVDSGMFRKMSFEE 234
>sp|C3NEC6|PSA_SULIY Proteasome subunit alpha OS=Sulfolobus islandicus (strain Y.G.57.14
/ Yellowstone #1) GN=psmA PE=3 SV=1
Length = 241
Score = 153 bits (387), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/234 (35%), Positives = 134/234 (57%), Gaps = 6/234 (2%)
Query: 8 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVT 67
GYDR ITIFSP+G L+QV+YAF+AVK G T+IG++ K V + ++K+ LLD S+
Sbjct: 9 GYDRAITIFSPDGSLYQVDYAFEAVKK-GWTAIGIKSKSGVVIASEKRKAQSLLDVDSIE 67
Query: 68 HLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQ 127
+F I ++G G+ +D R L+ AR A + R Y + +D L K +AD Q+YTQ
Sbjct: 68 KVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQ 127
Query: 128 HAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDP 187
H +RP GV ++ ID+ P+L+ +P+G + ++A + G A FLEK K D
Sbjct: 128 HGGVRPFGVALVIAGIDKSV-PKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKED- 185
Query: 188 AFTFQETVQTAISTLQSVLQ--EDFKASEIEVGVVSKENPEFRVLSIEEIDEHL 239
T ++T+ A+ L + L+ E + +E+G S + F ++ E+ + +L
Sbjct: 186 -LTIEDTILLALKALSATLKPNEKLTPNTVEIGYASTQTGLFLKMTSEDKNMYL 238
>sp|C3NHC6|PSA_SULIN Proteasome subunit alpha OS=Sulfolobus islandicus (strain Y.N.15.51
/ Yellowstone #2) GN=psmA PE=3 SV=1
Length = 241
Score = 153 bits (387), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/234 (35%), Positives = 134/234 (57%), Gaps = 6/234 (2%)
Query: 8 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVT 67
GYDR ITIFSP+G L+QV+YAF+AVK G T+IG++ K V + ++K+ LLD S+
Sbjct: 9 GYDRAITIFSPDGSLYQVDYAFEAVKK-GWTAIGIKSKSGVVIASEKRKAQSLLDVDSIE 67
Query: 68 HLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQ 127
+F I ++G G+ +D R L+ AR A + R Y + +D L K +AD Q+YTQ
Sbjct: 68 KVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQ 127
Query: 128 HAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDP 187
H +RP GV ++ ID+ P+L+ +P+G + ++A + G A FLEK K D
Sbjct: 128 HGGVRPFGVALVIAGIDKSV-PKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKED- 185
Query: 188 AFTFQETVQTAISTLQSVLQ--EDFKASEIEVGVVSKENPEFRVLSIEEIDEHL 239
T ++T+ A+ L + L+ E + +E+G S + F ++ E+ + +L
Sbjct: 186 -LTIEDTILLALKALSATLKPNEKLTPNTVEIGYASTQTGLFLKMTSEDKNMYL 238
>sp|C3MVG1|PSA_SULIM Proteasome subunit alpha OS=Sulfolobus islandicus (strain M.14.25 /
Kamchatka #1) GN=psmA PE=3 SV=1
Length = 241
Score = 153 bits (387), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/234 (35%), Positives = 134/234 (57%), Gaps = 6/234 (2%)
Query: 8 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVT 67
GYDR ITIFSP+G L+QV+YAF+AVK G T+IG++ K V + ++K+ LLD S+
Sbjct: 9 GYDRAITIFSPDGSLYQVDYAFEAVKK-GWTAIGIKSKSGVVIASEKRKAQSLLDVDSIE 67
Query: 68 HLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQ 127
+F I ++G G+ +D R L+ AR A + R Y + +D L K +AD Q+YTQ
Sbjct: 68 KVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQ 127
Query: 128 HAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDP 187
H +RP GV ++ ID+ P+L+ +P+G + ++A + G A FLEK K D
Sbjct: 128 HGGVRPFGVALVIAGIDKSV-PKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKED- 185
Query: 188 AFTFQETVQTAISTLQSVLQ--EDFKASEIEVGVVSKENPEFRVLSIEEIDEHL 239
T ++T+ A+ L + L+ E + +E+G S + F ++ E+ + +L
Sbjct: 186 -LTIEDTILLALKALSATLKPNEKLTPNTVEIGYASTQTGLFLKMTSEDKNMYL 238
>sp|C3MQ43|PSA_SULIL Proteasome subunit alpha OS=Sulfolobus islandicus (strain L.S.2.15
/ Lassen #1) GN=psmA PE=3 SV=1
Length = 241
Score = 153 bits (387), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/234 (35%), Positives = 134/234 (57%), Gaps = 6/234 (2%)
Query: 8 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVT 67
GYDR ITIFSP+G L+QV+YAF+AVK G T+IG++ K V + ++K+ LLD S+
Sbjct: 9 GYDRAITIFSPDGSLYQVDYAFEAVKK-GWTAIGIKSKSGVVIASEKRKAQSLLDVDSIE 67
Query: 68 HLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQ 127
+F I ++G G+ +D R L+ AR A + R Y + +D L K +AD Q+YTQ
Sbjct: 68 KVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQ 127
Query: 128 HAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDP 187
H +RP GV ++ ID+ P+L+ +P+G + ++A + G A FLEK K D
Sbjct: 128 HGGVRPFGVALVIAGIDKSV-PKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKED- 185
Query: 188 AFTFQETVQTAISTLQSVLQ--EDFKASEIEVGVVSKENPEFRVLSIEEIDEHL 239
T ++T+ A+ L + L+ E + +E+G S + F ++ E+ + +L
Sbjct: 186 -LTIEDTILLALKALSATLKPNEKLTPNTVEIGYASTQTGLFLKMTSEDKNMYL 238
>sp|C4KHD9|PSA_SULIK Proteasome subunit alpha OS=Sulfolobus islandicus (strain M.16.4 /
Kamchatka #3) GN=psmA PE=3 SV=1
Length = 241
Score = 153 bits (387), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/234 (35%), Positives = 134/234 (57%), Gaps = 6/234 (2%)
Query: 8 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVT 67
GYDR ITIFSP+G L+QV+YAF+AVK G T+IG++ K V + ++K+ LLD S+
Sbjct: 9 GYDRAITIFSPDGSLYQVDYAFEAVKK-GWTAIGIKSKSGVVIASEKRKAQSLLDVDSIE 67
Query: 68 HLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQ 127
+F I ++G G+ +D R L+ AR A + R Y + +D L K +AD Q+YTQ
Sbjct: 68 KVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQ 127
Query: 128 HAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDP 187
H +RP GV ++ ID+ P+L+ +P+G + ++A + G A FLEK K D
Sbjct: 128 HGGVRPFGVALVIAGIDKSV-PKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKED- 185
Query: 188 AFTFQETVQTAISTLQSVLQ--EDFKASEIEVGVVSKENPEFRVLSIEEIDEHL 239
T ++T+ A+ L + L+ E + +E+G S + F ++ E+ + +L
Sbjct: 186 -LTIEDTILLALKALSATLKPNEKLTPNTVEIGYASTQTGLFLKMTSEDKNMYL 238
>sp|C3N5R0|PSA_SULIA Proteasome subunit alpha OS=Sulfolobus islandicus (strain M.16.27)
GN=psmA PE=3 SV=1
Length = 241
Score = 153 bits (387), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/234 (35%), Positives = 134/234 (57%), Gaps = 6/234 (2%)
Query: 8 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVT 67
GYDR ITIFSP+G L+QV+YAF+AVK G T+IG++ K V + ++K+ LLD S+
Sbjct: 9 GYDRAITIFSPDGSLYQVDYAFEAVKK-GWTAIGIKSKSGVVIASEKRKAQSLLDVDSIE 67
Query: 68 HLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQ 127
+F I ++G G+ +D R L+ AR A + R Y + +D L K +AD Q+YTQ
Sbjct: 68 KVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQ 127
Query: 128 HAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDP 187
H +RP GV ++ ID+ P+L+ +P+G + ++A + G A FLEK K D
Sbjct: 128 HGGVRPFGVALVIAGIDKSV-PKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKED- 185
Query: 188 AFTFQETVQTAISTLQSVLQ--EDFKASEIEVGVVSKENPEFRVLSIEEIDEHL 239
T ++T+ A+ L + L+ E + +E+G S + F ++ E+ + +L
Sbjct: 186 -LTIEDTILLALKALSATLKPNEKLTPNTVEIGYASTQTGLFLKMTSEDKNMYL 238
>sp|Q4JB24|PSA_SULAC Proteasome subunit alpha OS=Sulfolobus acidocaldarius (strain ATCC
33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
GN=psmA PE=3 SV=1
Length = 242
Score = 151 bits (381), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 85/237 (35%), Positives = 131/237 (55%), Gaps = 5/237 (2%)
Query: 8 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVT 67
GYDR ITIFSP+G L+QV+YAF+AVK G T++GV+ K V ++ +K+ +LLD +
Sbjct: 9 GYDRAITIFSPDGSLYQVDYAFEAVKR-GWTTLGVKTKSGVVLLAEKRKATQLLDVDGIE 67
Query: 68 HLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQ 127
+F + ++G G+ +D R L+ AR +A + R Y + ++ L K I+D Q YTQ
Sbjct: 68 KIFMLDDHVGCTFAGLASDGRILIDYARSQALQHRLIYDEPISIEYLTKVISDVKQAYTQ 127
Query: 128 HAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDP 187
H +RP GV +V ID+ P+L +P+G F + A + G A +LEK K D
Sbjct: 128 HGGVRPFGVALIVGGIDKGKQPKLLMTEPSGQFMPYYAVAIGQGGYTATEYLEKNYKED- 186
Query: 188 AFTFQETVQTAISTLQSVLQ--EDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAI 242
Q T+ A+ L + L+ E S +E+G ++ F+ L+ EE + L I
Sbjct: 187 -LDIQSTILLALRALMATLKPGEKLNYSSVEIGYADVDSGTFKKLTTEERSDLLQKI 242
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.134 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 87,686,314
Number of Sequences: 539616
Number of extensions: 3362261
Number of successful extensions: 9416
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 189
Number of HSP's successfully gapped in prelim test: 75
Number of HSP's that attempted gapping in prelim test: 8862
Number of HSP's gapped (non-prelim): 267
length of query: 246
length of database: 191,569,459
effective HSP length: 114
effective length of query: 132
effective length of database: 130,053,235
effective search space: 17167027020
effective search space used: 17167027020
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)