Query 025899
Match_columns 246
No_of_seqs 213 out of 1298
Neff 7.3
Searched_HMMs 29240
Date Mon Mar 25 20:08:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025899.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025899hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4afl_A P29ING4, inhibitor of g 100.0 4.6E-28 1.6E-32 184.6 11.0 102 1-109 3-104 (104)
2 1wen_A Inhibitor of growth fam 99.9 5.7E-24 1.9E-28 150.8 6.6 67 179-245 5-71 (71)
3 1weu_A Inhibitor of growth fam 99.9 2.6E-23 8.8E-28 153.8 6.7 67 179-245 25-91 (91)
4 2g6q_A Inhibitor of growth pro 99.9 1E-23 3.5E-28 145.7 1.1 58 182-239 3-60 (62)
5 2jmi_A Protein YNG1, ING1 homo 99.9 8.5E-23 2.9E-27 150.7 2.8 59 182-240 18-77 (90)
6 1x4i_A Inhibitor of growth pro 99.9 4.2E-23 1.4E-27 145.9 0.2 57 186-242 2-58 (70)
7 3c6w_A P28ING5, inhibitor of g 99.8 8.5E-23 2.9E-27 139.7 1.1 56 184-239 3-58 (59)
8 2vnf_A ING 4, P29ING4, inhibit 99.8 1.7E-22 5.8E-27 138.7 1.1 58 182-239 2-59 (60)
9 1wew_A DNA-binding family prot 99.7 1E-18 3.5E-23 126.0 3.2 65 177-242 3-75 (78)
10 2rsd_A E3 SUMO-protein ligase 99.6 1.1E-16 3.9E-21 112.3 2.3 57 183-240 3-66 (68)
11 2k16_A Transcription initiatio 99.6 2.6E-16 8.8E-21 112.5 2.0 59 185-246 13-75 (75)
12 1wem_A Death associated transc 99.5 6.4E-16 2.2E-20 110.8 1.2 51 189-242 15-73 (76)
13 3o70_A PHD finger protein 13; 99.5 1.2E-15 4.1E-20 107.0 2.5 53 184-239 13-67 (68)
14 3o7a_A PHD finger protein 13 v 99.5 1.4E-15 4.8E-20 101.2 1.6 47 189-238 3-51 (52)
15 1we9_A PHD finger family prote 99.5 3.7E-15 1.3E-19 103.3 2.9 53 187-242 3-61 (64)
16 3kqi_A GRC5, PHD finger protei 99.5 1.3E-15 4.5E-20 108.8 0.5 52 186-240 6-62 (75)
17 1wee_A PHD finger family prote 99.5 6.4E-15 2.2E-19 104.4 3.4 54 185-241 11-68 (72)
18 1wep_A PHF8; structural genomi 99.5 3.5E-15 1.2E-19 107.7 1.2 50 188-240 10-64 (79)
19 2lv9_A Histone-lysine N-methyl 99.3 6.1E-13 2.1E-17 99.7 4.4 50 187-239 25-76 (98)
20 1mm2_A MI2-beta; PHD, zinc fin 99.3 8.6E-13 2.9E-17 90.5 4.4 51 189-244 8-61 (61)
21 3kv5_D JMJC domain-containing 99.3 9.1E-14 3.1E-18 131.1 -1.5 53 185-240 32-89 (488)
22 4gne_A Histone-lysine N-methyl 99.3 5.9E-13 2E-17 101.1 3.1 49 187-238 12-61 (107)
23 1xwh_A Autoimmune regulator; P 99.3 9E-13 3.1E-17 91.8 3.2 51 188-243 6-59 (66)
24 2xb1_A Pygopus homolog 2, B-ce 99.3 5E-13 1.7E-17 101.4 1.0 47 191-240 4-62 (105)
25 2ri7_A Nucleosome-remodeling f 99.3 1.5E-13 5.3E-18 112.9 -2.0 53 185-240 3-60 (174)
26 2kgg_A Histone demethylase jar 99.3 8.3E-13 2.9E-17 87.6 1.4 44 192-237 5-52 (52)
27 2puy_A PHD finger protein 21A; 99.3 1.2E-12 4.1E-17 89.4 1.8 49 190-243 5-56 (60)
28 2yql_A PHD finger protein 21A; 99.2 3E-12 1E-16 86.2 2.8 45 189-238 8-55 (56)
29 2l5u_A Chromodomain-helicase-D 99.2 4.4E-12 1.5E-16 86.9 2.7 47 188-239 9-58 (61)
30 2ku3_A Bromodomain-containing 99.2 2.3E-12 7.9E-17 90.9 1.1 51 188-241 14-68 (71)
31 1f62_A Transcription factor WS 99.2 3.9E-12 1.4E-16 83.9 2.1 45 192-239 2-50 (51)
32 2vpb_A Hpygo1, pygopus homolog 99.2 1.6E-12 5.4E-17 90.2 -0.8 42 193-237 12-64 (65)
33 3kv4_A PHD finger protein 8; e 99.2 8.7E-13 3E-17 123.0 -3.5 50 188-240 3-57 (447)
34 2e6r_A Jumonji/ARID domain-con 99.2 1.3E-11 4.6E-16 91.3 3.4 49 189-240 15-67 (92)
35 2l43_A N-teminal domain from h 99.2 5.5E-12 1.9E-16 92.7 1.1 49 190-241 25-77 (88)
36 2lri_C Autoimmune regulator; Z 99.1 4.9E-11 1.7E-15 82.9 3.8 46 190-240 12-60 (66)
37 2yt5_A Metal-response element- 99.1 5.2E-11 1.8E-15 82.6 2.9 56 186-244 2-66 (66)
38 1fp0_A KAP-1 corepressor; PHD 99.0 2.3E-10 8E-15 83.6 5.6 48 188-240 23-73 (88)
39 3asl_A E3 ubiquitin-protein li 99.0 2.3E-10 8E-15 80.4 3.2 43 194-239 23-69 (70)
40 2e6s_A E3 ubiquitin-protein li 98.9 7.3E-10 2.5E-14 79.2 3.9 44 192-238 28-76 (77)
41 1wev_A Riken cDNA 1110020M19; 98.9 2.3E-10 7.9E-15 83.9 1.3 52 188-242 14-75 (88)
42 2kwj_A Zinc finger protein DPF 98.8 1.1E-09 3.9E-14 84.0 1.5 49 192-243 60-112 (114)
43 3shb_A E3 ubiquitin-protein li 98.7 4.6E-09 1.6E-13 75.0 3.2 42 194-238 31-76 (77)
44 3ask_A E3 ubiquitin-protein li 98.6 8.6E-09 2.9E-13 87.6 2.8 45 192-239 176-225 (226)
45 3pur_A Lysine-specific demethy 98.6 6.1E-09 2.1E-13 98.1 1.7 37 201-240 56-95 (528)
46 3v43_A Histone acetyltransfera 98.6 2.1E-08 7.1E-13 76.6 3.7 44 192-238 63-111 (112)
47 2ysm_A Myeloid/lymphoid or mix 98.4 8E-08 2.7E-12 73.1 1.7 45 192-239 56-104 (111)
48 3lqh_A Histone-lysine N-methyl 98.3 9.1E-08 3.1E-12 79.1 0.7 37 201-240 19-64 (183)
49 2lbm_A Transcriptional regulat 98.1 4.7E-07 1.6E-11 71.7 1.1 46 190-240 63-118 (142)
50 3ql9_A Transcriptional regulat 98.1 3.5E-07 1.2E-11 71.3 -0.4 49 188-241 55-113 (129)
51 2ysm_A Myeloid/lymphoid or mix 98.1 2.5E-06 8.5E-11 64.7 4.3 45 190-237 7-55 (111)
52 2kwj_A Zinc finger protein DPF 98.0 1.2E-06 4E-11 67.0 0.9 43 192-237 3-59 (114)
53 3u5n_A E3 ubiquitin-protein li 98.0 2.4E-06 8.3E-11 71.8 2.7 48 189-240 6-55 (207)
54 3v43_A Histone acetyltransfera 97.9 1.8E-06 6.1E-11 65.8 0.7 44 191-237 6-62 (112)
55 3rsn_A SET1/ASH2 histone methy 97.5 4.6E-05 1.6E-09 62.3 3.5 48 189-239 4-59 (177)
56 4bbq_A Lysine-specific demethy 97.2 0.00021 7E-09 54.3 3.1 36 202-240 74-115 (117)
57 1wil_A KIAA1045 protein; ring 95.5 0.014 4.9E-07 41.6 4.0 46 190-238 15-75 (89)
58 3a1b_A DNA (cytosine-5)-methyl 94.6 0.0081 2.8E-07 48.1 0.7 49 189-240 78-135 (159)
59 2pv0_B DNA (cytosine-5)-methyl 93.8 0.016 5.6E-07 52.6 1.1 49 189-240 92-149 (386)
60 2lq6_A Bromodomain-containing 92.6 0.036 1.2E-06 39.8 1.2 30 191-221 18-48 (87)
61 2xzr_A Immunoglobulin-binding 92.5 2.2 7.6E-05 30.9 14.3 96 4-105 8-103 (114)
62 1vyx_A ORF K3, K3RING; zinc-bi 90.0 0.029 9.8E-07 37.4 -1.5 49 189-239 5-56 (60)
63 2d8s_A Cellular modulator of i 85.1 0.36 1.2E-05 33.8 1.7 47 190-240 15-68 (80)
64 2ysl_A Tripartite motif-contai 83.7 1.2 4.1E-05 29.6 3.9 50 188-242 18-69 (73)
65 3ghg_A Fibrinogen alpha chain; 83.4 5.8 0.0002 37.2 9.4 30 16-45 60-89 (562)
66 2zqm_A Prefoldin beta subunit 82.5 8.2 0.00028 28.2 8.5 104 12-117 2-109 (117)
67 1deq_A Fibrinogen (alpha chain 80.3 26 0.00089 31.5 12.1 44 65-108 111-157 (390)
68 1weq_A PHD finger protein 7; s 78.7 2.3 7.9E-05 30.2 3.9 46 190-238 26-78 (85)
69 2kiz_A E3 ubiquitin-protein li 78.3 0.84 2.9E-05 30.2 1.5 45 189-240 13-61 (69)
70 1m1j_C Fibrinogen gamma chain; 77.6 42 0.0014 30.5 14.2 101 4-113 25-133 (409)
71 2ecv_A Tripartite motif-contai 76.7 1.1 3.8E-05 30.5 1.8 48 188-240 17-69 (85)
72 3k1l_B Fancl; UBC, ring, RWD, 76.6 1.7 6E-05 39.0 3.4 49 190-239 308-370 (381)
73 1x64_A Alpha-actinin-2 associa 76.1 3.8 0.00013 28.5 4.6 47 189-240 24-82 (89)
74 2ect_A Ring finger protein 126 75.9 2.5 8.5E-05 28.5 3.4 47 189-240 14-62 (78)
75 3ghg_A Fibrinogen alpha chain; 75.6 20 0.0007 33.6 10.4 10 99-108 145-154 (562)
76 2ecw_A Tripartite motif-contai 74.5 2.4 8.3E-05 28.7 3.1 48 188-240 17-69 (85)
77 1v87_A Deltex protein 2; ring- 73.0 1.2 3.9E-05 32.6 1.2 32 211-243 61-95 (114)
78 2yur_A Retinoblastoma-binding 72.4 1.1 3.8E-05 30.2 0.9 47 189-239 14-61 (74)
79 2ct2_A Tripartite motif protei 72.4 1.2 4.2E-05 30.6 1.1 48 189-240 14-66 (88)
80 2ep4_A Ring finger protein 24; 71.9 1.8 6.1E-05 28.9 1.9 44 190-240 15-62 (74)
81 1deq_A Fibrinogen (alpha chain 71.9 56 0.0019 29.3 14.1 43 71-113 113-155 (390)
82 2ysj_A Tripartite motif-contai 71.3 2 6.9E-05 27.7 2.0 44 188-236 18-63 (63)
83 1x4j_A Ring finger protein 38; 70.8 1.5 5.2E-05 29.4 1.3 48 189-241 22-71 (75)
84 2e61_A Zinc finger CW-type PWW 70.2 3.2 0.00011 28.3 2.8 33 201-235 16-49 (69)
85 2d8t_A Dactylidin, ring finger 68.2 3.2 0.00011 27.5 2.5 44 190-240 15-59 (71)
86 2yf2_A C4B binding protein; im 67.7 22 0.00074 22.9 7.1 44 7-50 15-61 (65)
87 2ea6_A Ring finger protein 4; 67.6 2.7 9.3E-05 27.3 2.0 46 189-241 14-67 (69)
88 1m1j_A Fibrinogen alpha subuni 66.6 81 0.0028 29.1 13.9 43 74-116 114-156 (491)
89 1iym_A EL5; ring-H2 finger, ub 66.1 3.1 0.00011 25.8 2.0 45 190-239 5-52 (55)
90 2l0b_A E3 ubiquitin-protein li 65.4 2 7E-05 30.2 1.1 46 189-239 39-86 (91)
91 2ecj_A Tripartite motif-contai 65.0 3.8 0.00013 25.6 2.3 43 189-236 14-58 (58)
92 2csy_A Zinc finger protein 183 64.7 2.5 8.7E-05 28.7 1.4 45 188-239 13-58 (81)
93 2lk0_A RNA-binding protein 5; 64.3 3.2 0.00011 23.7 1.6 13 228-240 3-15 (32)
94 2egp_A Tripartite motif-contai 61.2 5.3 0.00018 26.7 2.6 47 189-240 11-63 (79)
95 2zdi_C Prefoldin subunit alpha 61.0 11 0.00038 29.1 4.7 105 10-117 3-137 (151)
96 2k1p_A Zinc finger RAN-binding 60.1 2.9 9.8E-05 24.1 0.8 13 228-240 4-16 (33)
97 2ecy_A TNF receptor-associated 58.9 3 0.0001 27.1 0.9 48 188-241 13-61 (66)
98 2ecm_A Ring finger and CHY zin 58.0 3.1 0.00011 25.8 0.8 44 191-239 6-52 (55)
99 1bor_A Transcription factor PM 56.3 11 0.00038 23.6 3.4 42 188-240 4-47 (56)
100 2ecl_A Ring-box protein 2; RNF 55.9 4.9 0.00017 27.5 1.6 25 211-240 48-74 (81)
101 2eli_A Protein kinase C alpha 55.8 15 0.0005 25.6 4.2 33 189-224 27-63 (85)
102 4gne_A Histone-lysine N-methyl 54.9 9.5 0.00033 28.1 3.2 27 204-233 70-98 (107)
103 4a0k_B E3 ubiquitin-protein li 54.9 3.3 0.00011 31.1 0.6 24 211-239 84-109 (117)
104 3nmd_A CGMP dependent protein 54.8 48 0.0016 22.6 7.5 44 74-117 22-65 (72)
105 2wuj_A Septum site-determining 53.9 15 0.00052 23.7 3.7 28 4-34 25-52 (57)
106 1wig_A KIAA1808 protein; LIM d 53.4 11 0.00036 25.2 3.0 44 192-240 7-63 (73)
107 1gs9_A Apolipoprotein E, APOE4 52.2 83 0.0029 24.6 9.5 41 4-44 33-76 (165)
108 2ke4_A CDC42-interacting prote 52.1 42 0.0015 24.1 6.2 18 98-115 68-85 (98)
109 1m1j_A Fibrinogen alpha subuni 49.5 1.6E+02 0.0055 27.1 13.8 47 66-112 110-159 (491)
110 1jm7_A BRCA1, breast cancer ty 49.5 3.7 0.00013 29.5 0.1 45 191-240 22-68 (112)
111 3na7_A HP0958; flagellar bioge 49.2 1.1E+02 0.0039 25.3 15.1 32 8-39 24-55 (256)
112 3mq9_A Bone marrow stromal ant 47.8 1.5E+02 0.0053 26.4 14.7 33 84-116 435-467 (471)
113 3nmd_A CGMP dependent protein 47.1 42 0.0015 22.8 5.2 36 10-45 20-55 (72)
114 2co8_A NEDD9 interacting prote 45.8 41 0.0014 22.7 5.2 45 190-239 15-74 (82)
115 3nw0_A Non-structural maintena 45.1 6.6 0.00023 33.0 1.1 44 190-238 180-225 (238)
116 2lh0_A Histone chaperone RTT10 44.9 15 0.00052 24.9 2.6 32 11-42 9-40 (70)
117 4b2u_A S67; toxin, ICK; NMR {S 44.4 4.7 0.00016 22.9 0.0 14 228-241 16-29 (36)
118 2jwo_A RAG-2, V(D)J recombinat 44.1 13 0.00046 25.6 2.2 31 203-235 38-75 (82)
119 2djb_A Polycomb group ring fin 43.5 9.2 0.00032 25.2 1.4 47 189-241 14-61 (72)
120 1x62_A C-terminal LIM domain p 43.0 29 0.00098 23.2 4.0 46 190-240 15-72 (79)
121 4fla_A Regulation of nuclear P 41.2 1.2E+02 0.0042 23.4 9.6 43 71-113 100-142 (152)
122 3ztg_A E3 ubiquitin-protein li 41.1 5.7 0.0002 27.5 0.0 47 189-239 12-59 (92)
123 1nfn_A Apolipoprotein E3; lipi 40.9 1.4E+02 0.0047 23.9 11.0 40 3-42 32-74 (191)
124 2l5g_A GPS2 protein, G protein 40.8 52 0.0018 19.4 4.1 25 66-90 11-35 (38)
125 2ct0_A Non-SMC element 1 homol 40.3 18 0.00061 24.7 2.5 44 190-239 15-61 (74)
126 3l11_A E3 ubiquitin-protein li 39.9 11 0.00037 27.3 1.4 45 190-240 15-60 (115)
127 2d8v_A Zinc finger FYVE domain 39.6 15 0.00052 24.7 1.9 30 190-240 9-38 (67)
128 2enz_A NPKC-theta, protein kin 39.0 27 0.00092 22.8 3.2 34 188-224 21-58 (65)
129 1t1h_A Gspef-atpub14, armadill 38.9 7.9 0.00027 25.8 0.5 46 189-240 7-53 (78)
130 2enn_A NPKC-theta, protein kin 38.6 19 0.00064 24.5 2.4 34 188-224 32-69 (77)
131 2yuu_A NPKC-delta, protein kin 37.3 22 0.00075 24.5 2.6 33 189-224 27-63 (83)
132 2efl_A Formin-binding protein 37.0 1.8E+02 0.0061 24.1 13.8 94 1-97 6-103 (305)
133 3ghg_B Fibrinogen beta chain; 36.8 2.5E+02 0.0086 25.8 12.8 37 79-115 157-193 (461)
134 3ghg_C Fibrinogen gamma chain; 36.3 2.4E+02 0.0083 25.5 14.6 39 76-114 96-134 (411)
135 3ng2_A RNF4, snurf, ring finge 36.0 14 0.00049 23.8 1.4 46 189-241 9-62 (71)
136 3dpl_R Ring-box protein 1; ubi 36.0 13 0.00046 27.0 1.3 24 211-239 73-98 (106)
137 2ecn_A Ring finger protein 141 35.6 7.4 0.00025 25.4 -0.1 44 189-240 14-58 (70)
138 4dac_A Computationally designe 35.2 54 0.0018 17.5 3.6 19 96-114 5-23 (28)
139 1fxk_C Protein (prefoldin); ar 34.0 1.4E+02 0.0048 21.9 7.1 44 74-117 84-127 (133)
140 1faq_A RAF-1; transferase, ser 33.8 24 0.00083 21.7 2.2 33 189-225 13-46 (52)
141 2d8x_A Protein pinch; LIM doma 33.7 20 0.0007 23.2 1.9 45 191-240 6-62 (70)
142 2dj7_A Actin-binding LIM prote 33.0 60 0.0021 21.7 4.4 45 190-239 15-71 (80)
143 3lrq_A E3 ubiquitin-protein li 32.9 8.9 0.0003 27.2 -0.1 44 190-240 22-68 (100)
144 2ckl_B Ubiquitin ligase protei 32.9 7.6 0.00026 30.2 -0.5 46 190-240 54-100 (165)
145 1m1j_C Fibrinogen gamma chain; 32.3 1.6E+02 0.0054 26.7 8.1 90 17-111 24-117 (409)
146 3fs3_A Nucleosome assembly pro 31.7 99 0.0034 27.5 6.5 32 7-38 40-71 (359)
147 1ptq_A Protein kinase C delta 31.7 18 0.00063 22.0 1.3 32 189-223 10-45 (50)
148 1x68_A FHL5 protein; four-and- 31.6 47 0.0016 21.8 3.6 44 192-240 7-66 (76)
149 3umh_A Amyloid beta A4 protein 31.0 2.2E+02 0.0075 23.3 8.3 26 3-28 104-129 (211)
150 2d8y_A Eplin protein; LIM doma 30.7 41 0.0014 23.0 3.2 45 190-239 15-72 (91)
151 1chc_A Equine herpes virus-1 r 30.6 16 0.00055 23.4 0.9 45 190-240 5-50 (68)
152 3qne_A Seryl-tRNA synthetase, 30.1 2.3E+02 0.008 26.1 9.0 21 97-117 83-103 (485)
153 2dar_A PDZ and LIM domain prot 29.8 34 0.0012 23.4 2.6 45 190-239 25-81 (90)
154 3lss_A Seryl-tRNA synthetase; 29.8 3.3E+02 0.011 25.0 11.2 24 94-117 113-136 (484)
155 2fiy_A Protein FDHE homolog; F 29.4 16 0.00055 31.9 1.0 27 189-217 181-220 (309)
156 3u50_C Telomerase-associated p 29.3 15 0.00051 29.4 0.7 17 223-239 52-68 (172)
157 4gdk_C APG16-like 1, autophagy 28.5 78 0.0027 18.5 3.6 33 13-45 2-34 (36)
158 2cu8_A Cysteine-rich protein 2 28.4 38 0.0013 22.2 2.6 44 191-239 10-67 (76)
159 1n0z_A ZNF265; zinc finger, RN 28.0 25 0.00086 21.6 1.4 12 228-239 12-25 (45)
160 2dq0_A Seryl-tRNA synthetase; 28.0 2.1E+02 0.0072 26.0 8.3 21 97-117 81-101 (455)
161 3abh_A Pacsin2, protein kinase 28.0 2.6E+02 0.009 23.3 8.6 30 70-99 88-117 (312)
162 3sjb_C Golgi to ER traffic pro 27.8 1.6E+02 0.0053 21.0 5.8 28 3-34 7-34 (93)
163 1nyp_A Pinch protein; LIM doma 27.8 23 0.00079 22.6 1.3 43 191-238 6-60 (66)
164 2cur_A Skeletal muscle LIM-pro 27.6 24 0.0008 22.8 1.4 44 191-239 6-61 (69)
165 2l7p_A Histone-lysine N-methyl 27.2 21 0.00071 26.0 1.1 31 201-235 26-58 (100)
166 3lhp_S 4E10_D0_1ISEA_004_N (T9 27.0 2E+02 0.0068 21.5 11.8 29 88-116 93-121 (123)
167 2d8z_A Four and A half LIM dom 26.9 36 0.0012 21.9 2.2 44 191-239 6-61 (70)
168 2ayu_A Nucleosome assembly pro 26.9 1.4E+02 0.0047 27.1 6.8 32 8-39 82-113 (417)
169 3hct_A TNF receptor-associated 26.9 14 0.00048 26.9 0.1 45 188-240 16-63 (118)
170 3oja_A Leucine-rich immune mol 26.2 3.5E+02 0.012 24.1 11.2 22 71-92 464-485 (487)
171 2yy0_A C-MYC-binding protein; 26.1 1.3E+02 0.0043 19.0 5.5 43 3-45 6-48 (53)
172 1l1o_C Replication protein A 7 25.7 23 0.00079 28.1 1.2 17 223-239 55-71 (181)
173 1lwu_C Fibrinogen gamma chain; 25.6 2.7E+02 0.0091 24.3 8.2 36 79-114 20-55 (323)
174 2yo3_A General control protein 25.0 2.9E+02 0.0098 23.5 7.9 45 70-114 201-245 (268)
175 4g2k_A General control protein 24.9 2.2E+02 0.0074 21.3 6.9 39 4-42 23-61 (125)
176 1wyh_A SLIM 2, skeletal muscle 24.9 44 0.0015 21.5 2.4 44 191-239 6-63 (72)
177 1e4u_A Transcriptional repress 24.5 32 0.0011 23.3 1.6 48 189-241 10-61 (78)
178 1uw0_A DNA ligase III; DNA rep 24.3 12 0.0004 28.0 -0.8 9 214-222 49-57 (117)
179 2dmj_A Poly (ADP-ribose) polym 24.2 15 0.0005 26.9 -0.2 9 214-222 57-65 (106)
180 2ehe_A Four and A half LIM dom 24.1 80 0.0027 20.9 3.7 44 192-240 17-74 (82)
181 3fl2_A E3 ubiquitin-protein li 24.0 11 0.00037 27.7 -1.0 45 191-241 53-98 (124)
182 2d9g_A YY1-associated factor 2 23.9 38 0.0013 21.5 1.7 15 226-240 7-21 (53)
183 2ckl_A Polycomb group ring fin 23.5 19 0.00064 25.7 0.2 45 190-240 15-60 (108)
184 1x4l_A Skeletal muscle LIM-pro 22.9 44 0.0015 21.6 2.0 44 191-239 6-65 (72)
185 1v9x_A Poly (ADP-ribose) polym 22.7 13 0.00044 27.7 -0.8 9 214-222 52-60 (114)
186 2qyw_A Vesicle transport throu 22.6 2.1E+02 0.0072 20.3 8.0 21 95-115 81-101 (102)
187 2egq_A FHL1 protein; LIM domai 21.8 37 0.0013 22.3 1.5 27 191-222 16-48 (77)
188 2db6_A SH3 and cysteine rich d 21.7 25 0.00086 23.7 0.6 33 189-224 27-63 (74)
189 2cs3_A Protein C14ORF4, MY039 21.4 40 0.0014 23.6 1.6 47 187-235 12-63 (93)
190 6rxn_A Rubredoxin; electron tr 21.4 39 0.0013 20.8 1.4 12 228-239 28-39 (46)
191 3vkg_A Dynein heavy chain, cyt 21.3 4.5E+02 0.016 30.4 10.6 114 4-117 1929-2053(3245)
192 3umh_A Amyloid beta A4 protein 21.3 3.4E+02 0.012 22.2 13.0 107 4-112 64-177 (211)
193 4rxn_A Rubredoxin; electron tr 20.7 41 0.0014 21.5 1.4 12 228-239 34-45 (54)
194 3a9j_C Mitogen-activated prote 20.5 48 0.0016 18.7 1.6 14 227-240 5-18 (34)
195 2dfs_A Myosin-5A; myosin-V, in 20.4 6.9E+02 0.023 25.4 14.5 21 77-97 1023-1043(1080)
196 1y8f_A UNC-13 homolog A, MUNC1 20.2 31 0.0011 22.5 0.8 32 189-223 23-58 (66)
No 1
>4afl_A P29ING4, inhibitor of growth protein 4; cell cycle, tumour suppressor, chromatin remodelling; 2.28A {Homo sapiens}
Probab=99.95 E-value=4.6e-28 Score=184.59 Aligned_cols=102 Identities=26% Similarity=0.507 Sum_probs=93.8
Q ss_pred CCcHHHHHHHhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCchhhHHHHHHHHHHHHHH
Q 025899 1 MSFLDEFQANLESLPNILQKKYALLRDLDKSLQEIQRQNEQRCEQEIEDLMREIRAGNITPNTSLIRFSDDALDEQKHSI 80 (246)
Q Consensus 1 m~yLe~fle~l~~LP~El~r~l~~IreLD~~~~~~~~~~~~~~~~~l~~~~k~~~~gs~~~~~~~~~l~~~I~~~~~~~~ 80 (246)
++|||+|+++|+|||.||+|+|++||+||.+++++++++++...+|+. ..|+++++++...+ .+|++.|.+++
T Consensus 3 ~~yledyld~ie~LP~El~r~~~~irelD~~~~~~~~~i~~~~~~~~~------~~~~~~~~~r~~~l-~~I~~~~~~~~ 75 (104)
T 4afl_A 3 GMYLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYMS------SARSLSSEEKLALL-KQIQEAYGKCK 75 (104)
T ss_dssp CHHHHHHHHSGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT------CCSCCCHHHHHHHH-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HCCCCChhhhHHHH-HHHHHHHHHHH
Confidence 479999999999999999999999999999999999999887776543 67888888888888 79999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 025899 81 RIADEKVALAVQAYDLVDTHIQQLDQYLK 109 (246)
Q Consensus 81 ~l~dEKv~LA~q~~dlVd~hirrLD~dl~ 109 (246)
.++||||+||+++|++||+|++|||.||+
T Consensus 76 ~l~dEKv~lA~~~~dlvdkhirrLD~dla 104 (104)
T 4afl_A 76 EFGDDKVQLAMQTYEMVDKHIRRLDTDLA 104 (104)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcC
Confidence 99999999999999999999999999874
No 2
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=99.89 E-value=5.7e-24 Score=150.82 Aligned_cols=67 Identities=63% Similarity=1.467 Sum_probs=61.3
Q ss_pred CCCCCCCCCCCCceeeeCCCCCCCceecCCCCCCCcceecccCCCCccCCCceeCcCCccccccCCC
Q 025899 179 MELDLPVDPNEPTYCVCNQVSYGEMVACDNPNCKIEWFHFGCVGLKEQPKGKWYCPDCAALKNRRKG 245 (246)
Q Consensus 179 ~~~~~~~~~~~~~~C~C~~~~~g~mi~Cd~~~C~~~wfH~~Cv~l~~~~~~~w~C~~C~~~~~~~~~ 245 (246)
.+.+.+.|+++.+||+|+++++|+||+||+++|+++|||+.||||+..|.++||||.|...++++++
T Consensus 5 ~~~~~~~d~~~~~~C~C~~~~~g~MI~CD~~~C~~~wfH~~Cvgl~~~p~g~w~Cp~C~~~~~k~~~ 71 (71)
T 1wen_A 5 SSGDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCPRCSQESGPSSG 71 (71)
T ss_dssp CSSCCCCCTTSCCCSTTCCCSCSSEECCSCSSCSCCCEETTTTTCSSCCSSCCCCTTTSSCSSSCCC
T ss_pred cccccccCCCCCCEEECCCCCCCCEeEeeCCCCCCccEecccCCcCcCCCCCEECCCCCccccccCC
Confidence 4567888999999999999999999999999999889999999999999999999999988777764
No 3
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=99.88 E-value=2.6e-23 Score=153.78 Aligned_cols=67 Identities=64% Similarity=1.490 Sum_probs=61.2
Q ss_pred CCCCCCCCCCCCceeeeCCCCCCCceecCCCCCCCcceecccCCCCccCCCceeCcCCccccccCCC
Q 025899 179 MELDLPVDPNEPTYCVCNQVSYGEMVACDNPNCKIEWFHFGCVGLKEQPKGKWYCPDCAALKNRRKG 245 (246)
Q Consensus 179 ~~~~~~~~~~~~~~C~C~~~~~g~mi~Cd~~~C~~~wfH~~Cv~l~~~~~~~w~C~~C~~~~~~~~~ 245 (246)
...+.+.|+++.+||+|+++++|+||+||+++|+++|||+.||||+..|.++||||.|...++++++
T Consensus 25 ~~~~~~~d~~e~~yCiC~~~~~g~MI~CD~~dC~~~WfH~~CVgl~~~p~g~W~Cp~C~~~~~k~~~ 91 (91)
T 1weu_A 25 DVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCPRCSQESGPSSG 91 (91)
T ss_dssp CCCSCCCCSCCCBCSTTCCBCCSCCCCCSCSSCSCCCCCSTTTTCSSCCCSSCCCTTTCCCCSSSCC
T ss_pred ccccCCcCCCCCcEEECCCCCCCCEeEecCCCCCCCCEecccCCcCcCCCCCEECcCccCcCCcCCC
Confidence 4567788999999999999999999999999999899999999999999999999999988777664
No 4
>2g6q_A Inhibitor of growth protein 2; protein-peptide complex, gene regulation, apoptosis; HET: M3L; 2.00A {Mus musculus}
Probab=99.87 E-value=1e-23 Score=145.69 Aligned_cols=58 Identities=67% Similarity=1.547 Sum_probs=48.9
Q ss_pred CCCCCCCCCceeeeCCCCCCCceecCCCCCCCcceecccCCCCccCCCceeCcCCccc
Q 025899 182 DLPVDPNEPTYCVCNQVSYGEMVACDNPNCKIEWFHFGCVGLKEQPKGKWYCPDCAAL 239 (246)
Q Consensus 182 ~~~~~~~~~~~C~C~~~~~g~mi~Cd~~~C~~~wfH~~Cv~l~~~~~~~w~C~~C~~~ 239 (246)
+.+.|+++.+||+|+++++|+||+||+++|+++|||+.||||+..|.++||||.|...
T Consensus 3 ~~~~d~~e~~yC~C~~~~~g~MI~CD~c~C~~~WfH~~Cvgl~~~p~~~w~Cp~C~~~ 60 (62)
T 2g6q_A 3 EFAIDPNEPTYCLCNQVSYGEMIGCDNEQCPIEWFHFSCVSLTYKPKGKWYCPKCRGD 60 (62)
T ss_dssp -------CCEETTTTEECCSEEEECSCTTCSSCEEETGGGTCSSCCSSCCCCHHHHTC
T ss_pred ccccCCCCCcEEECCCCCCCCeeeeeCCCCCcccEecccCCcCcCCCCCEECcCcccC
Confidence 4567889999999999999999999999999999999999999999999999999754
No 5
>2jmi_A Protein YNG1, ING1 homolog 1; PHD, histone, recognition, yeast, protein binding; NMR {Saccharomyces cerevisiae} PDB: 2jmj_A*
Probab=99.86 E-value=8.5e-23 Score=150.71 Aligned_cols=59 Identities=58% Similarity=1.356 Sum_probs=49.8
Q ss_pred CCCCCCCCCceeeeCCCCCCCceecCCCCCCCcceecccCCCCccCCCceeCcC-Ccccc
Q 025899 182 DLPVDPNEPTYCVCNQVSYGEMVACDNPNCKIEWFHFGCVGLKEQPKGKWYCPD-CAALK 240 (246)
Q Consensus 182 ~~~~~~~~~~~C~C~~~~~g~mi~Cd~~~C~~~wfH~~Cv~l~~~~~~~w~C~~-C~~~~ 240 (246)
..+.++++.+||+|+++++|+||+||+|+|+++|||+.||||+..|.++||||. |....
T Consensus 18 ~~~~~~~~~~yCiC~~~~~g~MI~CD~c~C~~eWfH~~CVgl~~~p~~~W~Cp~cC~~~~ 77 (90)
T 2jmi_A 18 TEGNNNQEEVYCFCRNVSYGPMVACDNPACPFEWFHYGCVGLKQAPKGKWYCSKDCKEIA 77 (90)
T ss_dssp ------CCSCCSTTTCCCSSSEECCCSSSCSCSCEETTTSSCSSCTTSCCCSSHHHHHHH
T ss_pred CCCCCCCCCcEEEeCCCCCCCEEEecCCCCccccCcCccCCCCcCCCCCccCChhhcchh
Confidence 344667889999999999999999999999999999999999999999999999 87543
No 6
>1x4i_A Inhibitor of growth protein 3; structural genomics, PHD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.85 E-value=4.2e-23 Score=145.93 Aligned_cols=57 Identities=67% Similarity=1.526 Sum_probs=52.3
Q ss_pred CCCCCceeeeCCCCCCCceecCCCCCCCcceecccCCCCccCCCceeCcCCcccccc
Q 025899 186 DPNEPTYCVCNQVSYGEMVACDNPNCKIEWFHFGCVGLKEQPKGKWYCPDCAALKNR 242 (246)
Q Consensus 186 ~~~~~~~C~C~~~~~g~mi~Cd~~~C~~~wfH~~Cv~l~~~~~~~w~C~~C~~~~~~ 242 (246)
++++.+||+|+++++|+||+||+++|+++|||+.||||+..|.++||||.|.....+
T Consensus 2 ~~~~~~yC~C~~~~~g~MI~CD~cdC~~~WfH~~Cvgl~~~p~~~w~Cp~C~~~~~k 58 (70)
T 1x4i_A 2 SSGSSGYCICNQVSYGEMVGCDNQDCPIEWFHYGCVGLTEAPKGKWYCPQCTAAMKR 58 (70)
T ss_dssp CCSCCCCSTTSCCCCSSEECCSCTTCSCCCEEHHHHTCSSCCSSCCCCHHHHHHHHH
T ss_pred CCCCCeEEEcCCCCCCCEeEeCCCCCCccCCcccccccCcCCCCCEECCCCCccccc
Confidence 467899999999999999999999998899999999999999999999999876543
No 7
>3c6w_A P28ING5, inhibitor of growth protein 5; chromatin, PHD, ING, epigenetics, alternative splicing, metal-binding, phosphoprotein, zinc; HET: M3L; 1.75A {Homo sapiens} PDB: 2pnx_A*
Probab=99.85 E-value=8.5e-23 Score=139.71 Aligned_cols=56 Identities=64% Similarity=1.496 Sum_probs=48.4
Q ss_pred CCCCCCCceeeeCCCCCCCceecCCCCCCCcceecccCCCCccCCCceeCcCCccc
Q 025899 184 PVDPNEPTYCVCNQVSYGEMVACDNPNCKIEWFHFGCVGLKEQPKGKWYCPDCAAL 239 (246)
Q Consensus 184 ~~~~~~~~~C~C~~~~~g~mi~Cd~~~C~~~wfH~~Cv~l~~~~~~~w~C~~C~~~ 239 (246)
++|+++.+||+|+++++|+||+||+++|+++|||+.||||+..|.++||||.|..+
T Consensus 3 ~~d~~e~~yC~C~~~~~g~mi~CD~~~C~~~wfH~~Cvgl~~~p~~~w~Cp~C~~~ 58 (59)
T 3c6w_A 3 CRGSNEPTYCLCHQVSYGEMIGCDNPDCPIEWFHFACVDLTTKPKGKWFCPRCVQE 58 (59)
T ss_dssp -----CCEETTTTEECCSEEEECSCTTCSSCEEETGGGTCSSCCSSCCCCHHHHCC
T ss_pred ccCCCCCcEEECCCCCCCCeeEeeCCCCCCCCEecccCCcccCCCCCEECcCccCc
Confidence 46788999999999999999999999999889999999999999999999999753
No 8
>2vnf_A ING 4, P29ING4, inhibitor of growth protein 4; acetylation, alternative splicing, anti-oncogene, cell cycle, coiled C nucleus, zinc, zinc-finger, ING4; HET: M3L; 1.76A {Homo sapiens} SCOP: g.50.1.2 PDB: 2k1j_A 2jmq_A 2qic_A*
Probab=99.84 E-value=1.7e-22 Score=138.75 Aligned_cols=58 Identities=71% Similarity=1.691 Sum_probs=48.1
Q ss_pred CCCCCCCCCceeeeCCCCCCCceecCCCCCCCcceecccCCCCccCCCceeCcCCccc
Q 025899 182 DLPVDPNEPTYCVCNQVSYGEMVACDNPNCKIEWFHFGCVGLKEQPKGKWYCPDCAAL 239 (246)
Q Consensus 182 ~~~~~~~~~~~C~C~~~~~g~mi~Cd~~~C~~~wfH~~Cv~l~~~~~~~w~C~~C~~~ 239 (246)
+.+.|+++.+||+|+++++|+||+||+++|+++|||+.||||+..|.++||||.|..+
T Consensus 2 ~~~~d~~e~~~C~C~~~~~g~mi~CD~cdC~~~wfH~~Cvgl~~~p~g~w~C~~C~~~ 59 (60)
T 2vnf_A 2 DMPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCPRCSQE 59 (60)
T ss_dssp -------CCEETTTTEECCSEEEECSCTTCSSCEEETGGGTCSSCCSSCCCCHHHHC-
T ss_pred CcccCCCCCCEEECCCcCCCCEEEeCCCCCCCceEehhcCCCCcCCCCCEECcCccCc
Confidence 4567889999999999999999999999999899999999999999999999999753
No 9
>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=99.73 E-value=1e-18 Score=126.04 Aligned_cols=65 Identities=31% Similarity=0.796 Sum_probs=54.6
Q ss_pred CCCCCCCCCCCCCCceeeeCCC-CCCCceecCCCCCCCcceecccCCCCccC-------CCceeCcCCcccccc
Q 025899 177 TGMELDLPVDPNEPTYCVCNQV-SYGEMVACDNPNCKIEWFHFGCVGLKEQP-------KGKWYCPDCAALKNR 242 (246)
Q Consensus 177 ~~~~~~~~~~~~~~~~C~C~~~-~~g~mi~Cd~~~C~~~wfH~~Cv~l~~~~-------~~~w~C~~C~~~~~~ 242 (246)
++++.+.+.++++.+||+|+++ ++|.||+|||..|. .|||+.||||+..+ .++|||+.|...+.+
T Consensus 3 s~~~~dd~~~~~~~~~CiC~~~~~~g~MI~CD~~~C~-~W~H~~CVgi~~~~~~~~~~~~~~~~C~~C~~~~~~ 75 (78)
T 1wew_A 3 SGSSGEDPFQPEIKVRCVCGNSLETDSMIQCEDPRCH-VWQHVGCVILPDKPMDGNPPLPESFYCEICRLTSGP 75 (78)
T ss_dssp CCCCCCCSSSCCCCCCCSSCCCCCCSCEEECSSTTTC-CEEEHHHHSCCCTTTCSCSCSCSSCCCHHHHHCCSC
T ss_pred CccccccccCCCCCEEeECCCcCCCCCEEEECCccCC-ccccCEEEccccccccccccCCCCEECCCCCcccCC
Confidence 3456677888899999999998 67999999965599 79999999999875 379999999876544
No 10
>2rsd_A E3 SUMO-protein ligase SIZ1; E3 SUMO ligase, plant homeodomain (PHD), histone binding; NMR {Oryza sativa japonica group}
Probab=99.61 E-value=1.1e-16 Score=112.30 Aligned_cols=57 Identities=25% Similarity=0.773 Sum_probs=46.8
Q ss_pred CCCCCCCCceeeeCCC-CCCCceecCCCCCCCcceecccCCCCccCC------CceeCcCCcccc
Q 025899 183 LPVDPNEPTYCVCNQV-SYGEMVACDNPNCKIEWFHFGCVGLKEQPK------GKWYCPDCAALK 240 (246)
Q Consensus 183 ~~~~~~~~~~C~C~~~-~~g~mi~Cd~~~C~~~wfH~~Cv~l~~~~~------~~w~C~~C~~~~ 240 (246)
.+.+|++.+||+|+.+ ++|.||+||+..|. .|||+.||||+..+. .+|||+.|+..+
T Consensus 3 d~~~~e~~v~C~C~~~~~~g~mI~CD~~~C~-~W~H~~Cvgi~~~~~~~~~~p~~~~C~~Cr~~r 66 (68)
T 2rsd_A 3 DSFQPEAKVRCICSSTMVNDSMIQCEDQRCQ-VWQHLNCVLIPDKPGESAEVPPVFYCELCRLSR 66 (68)
T ss_dssp SCCCSSCEECCTTCCCSCCSCEEECSCTTTC-EEEETTTSCCCSSTTSCCCCCSSCCCHHHHHHH
T ss_pred CCcCCCCCEEeECCCCcCCCCEEEECCCCCC-CeEchhhCCCCcccccccCCCCcEECcCccCcc
Confidence 3456778899999876 56899999976688 999999999987552 479999998654
No 11
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=99.59 E-value=2.6e-16 Score=112.50 Aligned_cols=59 Identities=36% Similarity=0.954 Sum_probs=49.5
Q ss_pred CCCCCCcee-eeCCCCCC-CceecCCCCCCCcceecccCCCCccC--CCceeCcCCccccccCCCC
Q 025899 185 VDPNEPTYC-VCNQVSYG-EMVACDNPNCKIEWFHFGCVGLKEQP--KGKWYCPDCAALKNRRKGR 246 (246)
Q Consensus 185 ~~~~~~~~C-~C~~~~~g-~mi~Cd~~~C~~~wfH~~Cv~l~~~~--~~~w~C~~C~~~~~~~~~~ 246 (246)
.++++..|| +|+++.+| .||+||+ |. .|||+.|||++..+ .+.||||.|.....++|++
T Consensus 13 ~~~~~~~~C~~C~~~~~~~~mi~CD~--C~-~wfH~~Cv~~~~~~~~~~~w~C~~C~~~~~k~kk~ 75 (75)
T 2k16_A 13 EWGNQIWICPGCNKPDDGSPMIGCDD--CD-DWYHWPCVGIMAAPPEEMQWFCPKCANKIKKDKKH 75 (75)
T ss_dssp SSSCEEECBTTTTBCCSSCCEEECSS--SS-SEEEHHHHTCSSCCCSSSCCCCTTTHHHHCSCCCC
T ss_pred ccCCCCcCCCCCCCCCCCCCEEEcCC--CC-cccccccCCCCccCCCCCCEEChhccCchhhcccC
Confidence 345567899 99999877 6999999 77 99999999988754 5899999999887777654
No 12
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2
Probab=99.55 E-value=6.4e-16 Score=110.75 Aligned_cols=51 Identities=39% Similarity=1.021 Sum_probs=43.5
Q ss_pred CCceeeeCCCCC-CCceecCCCCCCCcceecccCCCCccC-------CCceeCcCCcccccc
Q 025899 189 EPTYCVCNQVSY-GEMVACDNPNCKIEWFHFGCVGLKEQP-------KGKWYCPDCAALKNR 242 (246)
Q Consensus 189 ~~~~C~C~~~~~-g~mi~Cd~~~C~~~wfH~~Cv~l~~~~-------~~~w~C~~C~~~~~~ 242 (246)
+.+||+|+++.+ +.||+||. |. +|||+.||||+..+ ...|||+.|......
T Consensus 15 ~~~~C~C~~~~~~~~MI~Cd~--C~-~WfH~~Cvgl~~~~~~~l~~~~~~~~C~~C~~~~~p 73 (76)
T 1wem_A 15 NALYCICRQPHNNRFMICCDR--CE-EWFHGDCVGISEARGRLLERNGEDYICPNCTILSGP 73 (76)
T ss_dssp TCCCSTTCCCCCSSCEEECSS--SC-CEEEHHHHSCCHHHHHHHHHHTCCCCCHHHHHHSCS
T ss_pred CCCEEECCCccCCCCEEEeCC--CC-CcEeCeEEccchhhhhhccCCCCeEECcCCcCccCc
Confidence 369999999987 48999999 77 99999999998753 579999999876543
No 13
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=99.55 E-value=1.2e-15 Score=107.03 Aligned_cols=53 Identities=21% Similarity=0.658 Sum_probs=44.2
Q ss_pred CCCCCCCceeeeCCCCCC-CceecCCCCCCCcceecccCCCCcc-CCCceeCcCCccc
Q 025899 184 PVDPNEPTYCVCNQVSYG-EMVACDNPNCKIEWFHFGCVGLKEQ-PKGKWYCPDCAAL 239 (246)
Q Consensus 184 ~~~~~~~~~C~C~~~~~g-~mi~Cd~~~C~~~wfH~~Cv~l~~~-~~~~w~C~~C~~~ 239 (246)
..++.+.+||+|+++.+| .||+||. |. +|||+.|||++.. .++.|+|+.|...
T Consensus 13 ~~~~~~~~~CiC~~~~~~~~MIqCd~--C~-~WfH~~Cvgi~~~~~~~~~~C~~C~~s 67 (68)
T 3o70_A 13 NLYFQGLVTCFCMKPFAGRPMIECNE--CH-TWIHLSCAKIRKSNVPEVFVCQKCRDS 67 (68)
T ss_dssp -CTTTTCCCSTTCCCCTTCCEEECTT--TC-CEEETTTTTCCTTSCCSSCCCHHHHTC
T ss_pred cCCCCCceEeECCCcCCCCCEEECCC--CC-ccccccccCcCcccCCCcEECCCCCCC
Confidence 345567899999999876 5999999 77 9999999999884 3689999999753
No 14
>3o7a_A PHD finger protein 13 variant; PHF13, zinc finger, PHD domain, nuclear protein, structural structural genomics consortium, SGC, protein binding; HET: M3L; 1.67A {Homo sapiens}
Probab=99.53 E-value=1.4e-15 Score=101.19 Aligned_cols=47 Identities=23% Similarity=0.823 Sum_probs=41.2
Q ss_pred CCceeeeCCCCCC-CceecCCCCCCCcceecccCCCCccC-CCceeCcCCcc
Q 025899 189 EPTYCVCNQVSYG-EMVACDNPNCKIEWFHFGCVGLKEQP-KGKWYCPDCAA 238 (246)
Q Consensus 189 ~~~~C~C~~~~~g-~mi~Cd~~~C~~~wfH~~Cv~l~~~~-~~~w~C~~C~~ 238 (246)
+.+||+|+++++| .||+||+ |. +|||+.|||++..+ ++.|+||.|..
T Consensus 3 d~~~C~C~~~~~~~~MI~Cd~--C~-~W~H~~Cvgi~~~~~~~~~~C~~C~~ 51 (52)
T 3o7a_A 3 DLVTCFCMKPFAGRPMIECNE--CH-TWIHLSCAKIRKSNVPEVFVCQKCRD 51 (52)
T ss_dssp TCBCSTTCCBCTTCCEEECTT--TC-CEEETTTTTCCGGGCCSSCCCHHHHT
T ss_pred cCeEEEeCCcCCCCCEEEcCC--CC-ccccccccCCCcccCCCcEECcCCCC
Confidence 4689999999775 8999999 77 99999999998853 68999999964
No 15
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=99.52 E-value=3.7e-15 Score=103.25 Aligned_cols=53 Identities=25% Similarity=0.664 Sum_probs=44.8
Q ss_pred CCCCcee-eeCCCC--CCCceecCCCCCCCcceecccCCCCccC---CCceeCcCCcccccc
Q 025899 187 PNEPTYC-VCNQVS--YGEMVACDNPNCKIEWFHFGCVGLKEQP---KGKWYCPDCAALKNR 242 (246)
Q Consensus 187 ~~~~~~C-~C~~~~--~g~mi~Cd~~~C~~~wfH~~Cv~l~~~~---~~~w~C~~C~~~~~~ 242 (246)
.++..|| +|+++. .+.||+||. |. +|||+.||||+..+ .+.|+|+.|..++.+
T Consensus 3 ~~e~~~C~~C~~~~~~~~~mI~Cd~--C~-~WfH~~Cvgl~~~~~~~~~~~~C~~C~~k~~~ 61 (64)
T 1we9_A 3 SGSSGQCGACGESYAADEFWICCDL--CE-MWFHGKCVKITPARAEHIKQYKCPSCSNKSGP 61 (64)
T ss_dssp CSSCCCCSSSCCCCCSSSCEEECSS--SC-CEEETTTTTCCTTGGGGCSSCCCHHHHTTTCS
T ss_pred CCCCCCCCCCCCccCCCCCEEEccC--CC-CCCCccccCcChhHhcCCCcEECCCCcCcCCC
Confidence 4568899 999986 478999999 77 99999999998864 489999999876543
No 16
>3kqi_A GRC5, PHD finger protein 2; metal-binding, zinc-finger, histone-binding, NUC protein; HET: M3L; 1.78A {Homo sapiens} SCOP: g.50.1.2
Probab=99.51 E-value=1.3e-15 Score=108.85 Aligned_cols=52 Identities=38% Similarity=0.941 Sum_probs=44.2
Q ss_pred CCCCCceeeeCCCCC--CCceecCCCCCCCcceecccCCCCccC---CCceeCcCCcccc
Q 025899 186 DPNEPTYCVCNQVSY--GEMVACDNPNCKIEWFHFGCVGLKEQP---KGKWYCPDCAALK 240 (246)
Q Consensus 186 ~~~~~~~C~C~~~~~--g~mi~Cd~~~C~~~wfH~~Cv~l~~~~---~~~w~C~~C~~~~ 240 (246)
.+++++||+|+++.+ +.||+||. |. +|||+.||||+..+ .+.|+|+.|....
T Consensus 6 ~~~~~~yCiC~~~~~~~~~MI~Cd~--C~-~WfH~~Cvg~~~~~~~~~~~~~C~~C~~~~ 62 (75)
T 3kqi_A 6 MATVPVYCVCRLPYDVTRFMIECDA--CK-DWFHGSCVGVEEEEAPDIDIYHCPNCEKTH 62 (75)
T ss_dssp TCCCCEETTTTEECCTTSCEEECTT--TC-CEEEHHHHTCCTTTGGGBSSCCCHHHHHHH
T ss_pred CCCCeeEEECCCcCCCCCCEEEcCC--CC-CCEecccccccccccCCCCEEECCCCcccC
Confidence 456789999999854 58999999 77 99999999999865 3789999997653
No 17
>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=99.50 E-value=6.4e-15 Score=104.44 Aligned_cols=54 Identities=31% Similarity=0.721 Sum_probs=44.3
Q ss_pred CCCCCCceeeeCCCC-CC-CceecCCCCCCCcceecccCCCCcc--CCCceeCcCCccccc
Q 025899 185 VDPNEPTYCVCNQVS-YG-EMVACDNPNCKIEWFHFGCVGLKEQ--PKGKWYCPDCAALKN 241 (246)
Q Consensus 185 ~~~~~~~~C~C~~~~-~g-~mi~Cd~~~C~~~wfH~~Cv~l~~~--~~~~w~C~~C~~~~~ 241 (246)
.++++.+||+|+++. +| .||+||. |. .|||+.||||+.. ..++|||+.|.....
T Consensus 11 ~~~~~~~~C~C~~~~~~g~~mI~Cd~--C~-~W~H~~Cvg~~~~~~~~~~~~C~~C~~~~~ 68 (72)
T 1wee_A 11 GVDNWKVDCKCGTKDDDGERMLACDG--CG-VWHHTRCIGINNADALPSKFLCFRCIELSG 68 (72)
T ss_dssp SSCSSEECCTTCCCSCCSSCEEECSS--SC-EEEETTTTTCCTTSCCCSCCCCHHHHHHCS
T ss_pred CCCCcceEeeCCCccCCCCcEEECCC--CC-CccCCeeeccCccccCCCcEECCCccCCCC
Confidence 345678999999985 46 6999999 76 9999999999863 468999999986543
No 18
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=99.49 E-value=3.5e-15 Score=107.67 Aligned_cols=50 Identities=40% Similarity=0.972 Sum_probs=43.3
Q ss_pred CCCceeeeCCCC--CCCceecCCCCCCCcceecccCCCCccC---CCceeCcCCcccc
Q 025899 188 NEPTYCVCNQVS--YGEMVACDNPNCKIEWFHFGCVGLKEQP---KGKWYCPDCAALK 240 (246)
Q Consensus 188 ~~~~~C~C~~~~--~g~mi~Cd~~~C~~~wfH~~Cv~l~~~~---~~~w~C~~C~~~~ 240 (246)
++.+||+|+++. ++.||+||+ |. +|||+.||||+..+ .+.|+|+.|....
T Consensus 10 ~~~~~C~C~~~~d~~~~MIqCd~--C~-~WfH~~Cvgl~~~~~~~~~~~~C~~C~~~~ 64 (79)
T 1wep_A 10 LVPVYCLCRQPYNVNHFMIECGL--CQ-DWFHGSCVGIEEENAVDIDIYHCPDCEAVF 64 (79)
T ss_dssp CCCCCSTTSCSCCSSSCEEEBTT--TC-CEEEHHHHTCCHHHHTTCSBBCCTTTTTTS
T ss_pred CCccEEEcCCccCCCCceEEcCC--CC-CcEEeeecCcccccccCCCeEECCCccccc
Confidence 468899999986 578999999 77 99999999998854 4899999998654
No 19
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=99.34 E-value=6.1e-13 Score=99.71 Aligned_cols=50 Identities=30% Similarity=0.839 Sum_probs=40.9
Q ss_pred CCCCceeeeCCCC-CCCceecCCCCCCCcceecccCCCCcc-CCCceeCcCCccc
Q 025899 187 PNEPTYCVCNQVS-YGEMVACDNPNCKIEWFHFGCVGLKEQ-PKGKWYCPDCAAL 239 (246)
Q Consensus 187 ~~~~~~C~C~~~~-~g~mi~Cd~~~C~~~wfH~~Cv~l~~~-~~~~w~C~~C~~~ 239 (246)
.++.+.|+|+.+. .|.||+||. |. .|||+.|||++.. .++.|||+.|...
T Consensus 25 ~~d~vrCiC~~~~~~~~mi~Cd~--C~-~w~H~~C~~~~~~~~p~~w~C~~C~~~ 76 (98)
T 2lv9_A 25 GTDVTRCICGFTHDDGYMICCDK--CS-VWQHIDCMGIDRQHIPDTYLCERCQPR 76 (98)
T ss_dssp CCCBCCCTTSCCSCSSCEEEBTT--TC-BEEETTTTTCCTTSCCSSBCCTTTSSS
T ss_pred CCCCEEeECCCccCCCcEEEcCC--CC-CcCcCcCCCCCccCCCCCEECCCCcCC
Confidence 3456889999885 478999999 77 9999999998753 3468999999754
No 20
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=99.33 E-value=8.6e-13 Score=90.45 Aligned_cols=51 Identities=37% Similarity=1.032 Sum_probs=43.5
Q ss_pred CCcee-eeCCCCCCCceecCCCCCCCcceecccCC--CCccCCCceeCcCCccccccCC
Q 025899 189 EPTYC-VCNQVSYGEMVACDNPNCKIEWFHFGCVG--LKEQPKGKWYCPDCAALKNRRK 244 (246)
Q Consensus 189 ~~~~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cv~--l~~~~~~~w~C~~C~~~~~~~~ 244 (246)
+..+| +|+.. |+||.||. |+ .+||+.|++ |+..|.+.|||+.|.....++|
T Consensus 8 ~~~~C~vC~~~--g~ll~Cd~--C~-~~fH~~Cl~ppl~~~p~g~W~C~~C~~~~~k~~ 61 (61)
T 1mm2_A 8 HMEFCRVCKDG--GELLCCDT--CP-SSYHIHCLNPPLPEIPNGEWLCPRCTCPALKGK 61 (61)
T ss_dssp SCSSCTTTCCC--SSCBCCSS--SC-CCBCSSSSSSCCSSCCSSCCCCTTTTTTCCTTC
T ss_pred CCCcCCCCCCC--CCEEEcCC--CC-HHHcccccCCCcCcCCCCccCChhhcCchhcCC
Confidence 35677 89875 89999999 77 899999999 8888999999999998766554
No 21
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=99.32 E-value=9.1e-14 Score=131.13 Aligned_cols=53 Identities=45% Similarity=1.037 Sum_probs=44.8
Q ss_pred CCCCCCceeeeCCCC--CCCceecCCCCCCCcceecccCCCCccC---CCceeCcCCcccc
Q 025899 185 VDPNEPTYCVCNQVS--YGEMVACDNPNCKIEWFHFGCVGLKEQP---KGKWYCPDCAALK 240 (246)
Q Consensus 185 ~~~~~~~~C~C~~~~--~g~mi~Cd~~~C~~~wfH~~Cv~l~~~~---~~~w~C~~C~~~~ 240 (246)
...++.+||+|++++ ++.||+||. |. +|||+.|||++..+ .++|+|+.|....
T Consensus 32 ~~~~~~~yC~C~~~~d~~~~MIqCd~--C~-~WfH~~Cvgl~~~~~~~~~~~~C~~C~~~~ 89 (488)
T 3kv5_D 32 PPPPPPVYCVCRQPYDVNRFMIECDI--CK-DWFHGSCVGVEEHHAVDIDLYHCPNCAVLH 89 (488)
T ss_dssp CCCCCCEETTTTEECCTTSCEEEBTT--TC-CEEEHHHHTCCGGGGGGEEEBCCHHHHHHH
T ss_pred cCCCCCeEEeCCCcCCCCCCeEEccC--CC-CceeeeecCcCcccccCCCEEECCCCcCCc
Confidence 345678999999986 578999999 77 99999999999876 3789999998553
No 22
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=99.31 E-value=5.9e-13 Score=101.11 Aligned_cols=49 Identities=37% Similarity=0.915 Sum_probs=41.5
Q ss_pred CCCCcee-eeCCCCCCCceecCCCCCCCcceecccCCCCccCCCceeCcCCcc
Q 025899 187 PNEPTYC-VCNQVSYGEMVACDNPNCKIEWFHFGCVGLKEQPKGKWYCPDCAA 238 (246)
Q Consensus 187 ~~~~~~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cv~l~~~~~~~w~C~~C~~ 238 (246)
+.+..|| +|+. .|+||.||+..|+ .|||+.||+|+..|.|+||||.|..
T Consensus 12 ~~~~~~C~~C~~--~G~ll~CD~~~Cp-~~fH~~Cl~L~~~P~g~W~Cp~c~C 61 (107)
T 4gne_A 12 QMHEDYCFQCGD--GGELVMCDKKDCP-KAYHLLCLNLTQPPYGKWECPWHQC 61 (107)
T ss_dssp CSSCSSCTTTCC--CSEEEECCSTTCC-CEECTGGGTCSSCCSSCCCCGGGBC
T ss_pred CCCCCCCCcCCC--CCcEeEECCCCCC-cccccccCcCCcCCCCCEECCCCCC
Confidence 4456799 6774 4899999955599 7999999999999999999998864
No 23
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=99.30 E-value=9e-13 Score=91.76 Aligned_cols=51 Identities=35% Similarity=0.974 Sum_probs=43.2
Q ss_pred CCCcee-eeCCCCCCCceecCCCCCCCcceecccCC--CCccCCCceeCcCCccccccC
Q 025899 188 NEPTYC-VCNQVSYGEMVACDNPNCKIEWFHFGCVG--LKEQPKGKWYCPDCAALKNRR 243 (246)
Q Consensus 188 ~~~~~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cv~--l~~~~~~~w~C~~C~~~~~~~ 243 (246)
.+..+| +|+.. |+||.||. |+ .|||+.|++ |+..|.+.|||+.|.....++
T Consensus 6 ~~~~~C~vC~~~--g~ll~CD~--C~-~~fH~~Cl~ppl~~~P~g~W~C~~C~~~~~~~ 59 (66)
T 1xwh_A 6 KNEDECAVCRDG--GELICCDG--CP-RAFHLACLSPPLREIPSGTWRCSSCLQATVQE 59 (66)
T ss_dssp SCCCSBSSSSCC--SSCEECSS--CC-CEECTTTSSSCCSSCCSSCCCCHHHHHTCCCC
T ss_pred CCCCCCccCCCC--CCEEEcCC--CC-hhhcccccCCCcCcCCCCCeECccccCccccc
Confidence 345678 99976 89999999 88 899999999 888899999999998665443
No 24
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=99.28 E-value=5e-13 Score=101.42 Aligned_cols=47 Identities=30% Similarity=0.892 Sum_probs=39.8
Q ss_pred cee-eeCCC--CCCCceecC-CCCCCCcceecccCCCCc--------cCCCceeCcCCcccc
Q 025899 191 TYC-VCNQV--SYGEMVACD-NPNCKIEWFHFGCVGLKE--------QPKGKWYCPDCAALK 240 (246)
Q Consensus 191 ~~C-~C~~~--~~g~mi~Cd-~~~C~~~wfH~~Cv~l~~--------~~~~~w~C~~C~~~~ 240 (246)
..| +|+++ ++++||+|| . |. +|||+.||||+. .|.+.|+||.|....
T Consensus 4 ~~C~iC~~p~~~~~~mi~Cdd~--C~-~WfH~~CVglt~~~~~~i~~~~~~~~~Cp~C~~~~ 62 (105)
T 2xb1_A 4 YPCGACRSEVNDDQDAILCEAS--CQ-KWFHRECTGMTESAYGLLTTEASAVWACDLCLKTK 62 (105)
T ss_dssp CBCTTTCSBCCTTSCEEECTTT--TC-CEEEGGGTTCCHHHHHHHHHCTTEEECCHHHHHTT
T ss_pred CCCCCCCCccCCCCCEEEecCC--cc-cccccccCCcCHHHHHhhccCCCCCEECccccCcC
Confidence 357 99999 567899998 6 87 999999999997 466899999998654
No 25
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=99.28 E-value=1.5e-13 Score=112.91 Aligned_cols=53 Identities=26% Similarity=0.878 Sum_probs=42.4
Q ss_pred CCCCCCceeeeCCCC--CCCceecCCCCCCCcceecccCCCCccC---CCceeCcCCcccc
Q 025899 185 VDPNEPTYCVCNQVS--YGEMVACDNPNCKIEWFHFGCVGLKEQP---KGKWYCPDCAALK 240 (246)
Q Consensus 185 ~~~~~~~~C~C~~~~--~g~mi~Cd~~~C~~~wfH~~Cv~l~~~~---~~~w~C~~C~~~~ 240 (246)
.++++..||+|+++. +|.||+||. |+ .|||+.|||++..+ .+.|+||.|....
T Consensus 3 ~~~~~~~~C~C~~~~~~~~~mi~Cd~--C~-~WfH~~Cv~~~~~~~~~~~~~~C~~C~~~~ 60 (174)
T 2ri7_A 3 LGSDTKLYCICKTPEDESKFYIGCDR--CQ-NWYHGRCVGILQSEAELIDEYVCPQCQSTE 60 (174)
T ss_dssp ----CCEETTTTEECCTTSCEEECTT--TC-CEEEHHHHTCCHHHHTTCSSCCCHHHHHHH
T ss_pred CCCCCCcEeeCCCCCCCCCCEeECCC--CC-chhChhhcCCchhhccCccCeecCCCcchh
Confidence 345678999999985 478999999 88 99999999998743 7899999998653
No 26
>2kgg_A Histone demethylase jarid1A; PHD finger, histone modification, leukemia, alternative splicing, chromatin regulator, developmental protein; NMR {Homo sapiens} PDB: 2kgi_A* 3gl6_A*
Probab=99.26 E-value=8.3e-13 Score=87.64 Aligned_cols=44 Identities=34% Similarity=0.831 Sum_probs=36.0
Q ss_pred eeeeCCCCC--CCceecCCCCCCCcceecccCCCCccC--CCceeCcCCc
Q 025899 192 YCVCNQVSY--GEMVACDNPNCKIEWFHFGCVGLKEQP--KGKWYCPDCA 237 (246)
Q Consensus 192 ~C~C~~~~~--g~mi~Cd~~~C~~~wfH~~Cv~l~~~~--~~~w~C~~C~ 237 (246)
.|+|+++.+ +.||+||+ .|. +|||+.||||+..+ .++|+|+.|+
T Consensus 5 cc~C~~p~~~~~~mI~Cd~-~C~-~WfH~~Cvgl~~~~~~~~~~~C~~C~ 52 (52)
T 2kgg_A 5 AQNCQRPCKDKVDWVQCDG-GCD-EWFHQVCVGVSPEMAENEDYICINCA 52 (52)
T ss_dssp CTTCCCCCCTTCCEEECTT-TTC-CEEETTTTTCCHHHHHHSCCCCSCC-
T ss_pred CCCCcCccCCCCcEEEeCC-CCC-ccCcccccCCCccccCCCCEECCCCC
Confidence 469999864 46999993 388 99999999999854 4899999995
No 27
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=99.25 E-value=1.2e-12 Score=89.41 Aligned_cols=49 Identities=37% Similarity=1.091 Sum_probs=42.5
Q ss_pred Ccee-eeCCCCCCCceecCCCCCCCcceecccCC--CCccCCCceeCcCCccccccC
Q 025899 190 PTYC-VCNQVSYGEMVACDNPNCKIEWFHFGCVG--LKEQPKGKWYCPDCAALKNRR 243 (246)
Q Consensus 190 ~~~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cv~--l~~~~~~~w~C~~C~~~~~~~ 243 (246)
..+| +|++. |+||.||. |+ .|||+.|++ |+..|.+.|||+.|.....++
T Consensus 5 ~~~C~vC~~~--g~ll~Cd~--C~-~~fH~~Cl~ppl~~~p~g~W~C~~C~~~~~~~ 56 (60)
T 2puy_A 5 EDFCSVCRKS--GQLLMCDT--CS-RVYHLDCLDPPLKTIPKGMWICPRCQDQMLKK 56 (60)
T ss_dssp CSSCTTTCCC--SSCEECSS--SS-CEECGGGSSSCCSSCCCSCCCCHHHHHHHHHT
T ss_pred CCCCcCCCCC--CcEEEcCC--CC-cCEECCcCCCCcCCCCCCceEChhccChhhch
Confidence 4567 99986 89999999 88 999999999 888899999999998766554
No 28
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.23 E-value=3e-12 Score=86.22 Aligned_cols=45 Identities=40% Similarity=1.195 Sum_probs=39.8
Q ss_pred CCcee-eeCCCCCCCceecCCCCCCCcceecccCC--CCccCCCceeCcCCcc
Q 025899 189 EPTYC-VCNQVSYGEMVACDNPNCKIEWFHFGCVG--LKEQPKGKWYCPDCAA 238 (246)
Q Consensus 189 ~~~~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cv~--l~~~~~~~w~C~~C~~ 238 (246)
+..+| +|+.. |+||.||. |+ .|||+.|++ |+..|.+.|||+.|..
T Consensus 8 ~~~~C~vC~~~--g~ll~Cd~--C~-~~~H~~Cl~ppl~~~p~g~W~C~~C~~ 55 (56)
T 2yql_A 8 HEDFCSVCRKS--GQLLMCDT--CS-RVYHLDCLDPPLKTIPKGMWICPRCQD 55 (56)
T ss_dssp SCCSCSSSCCS--SCCEECSS--SS-CEECSSSSSSCCCSCCCSSCCCHHHHC
T ss_pred CCCCCccCCCC--CeEEEcCC--CC-cceECccCCCCcCCCCCCceEChhhhC
Confidence 45678 89986 89999999 88 999999999 8889999999999963
No 29
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=99.21 E-value=4.4e-12 Score=86.91 Aligned_cols=47 Identities=40% Similarity=1.113 Sum_probs=40.3
Q ss_pred CCCcee-eeCCCCCCCceecCCCCCCCcceecccCCC--CccCCCceeCcCCccc
Q 025899 188 NEPTYC-VCNQVSYGEMVACDNPNCKIEWFHFGCVGL--KEQPKGKWYCPDCAAL 239 (246)
Q Consensus 188 ~~~~~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cv~l--~~~~~~~w~C~~C~~~ 239 (246)
++..+| +|++. |+||.||. |+ .|||+.|++. +..|.+.|||+.|...
T Consensus 9 ~~~~~C~vC~~~--g~ll~CD~--C~-~~fH~~Cl~p~l~~~p~g~W~C~~C~~~ 58 (61)
T 2l5u_A 9 DHQDYCEVCQQG--GEIILCDT--CP-RAYHMVCLDPDMEKAPEGKWSCPHCEKE 58 (61)
T ss_dssp CCCSSCTTTSCC--SSEEECSS--SS-CEEEHHHHCTTCCSCCCSSCCCTTGGGG
T ss_pred CCCCCCccCCCC--CcEEECCC--CC-hhhhhhccCCCCCCCCCCceECcccccc
Confidence 346788 89985 89999999 88 8999999996 6688999999999754
No 30
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=99.20 E-value=2.3e-12 Score=90.90 Aligned_cols=51 Identities=27% Similarity=0.743 Sum_probs=42.5
Q ss_pred CCCcee-eeCCCC---CCCceecCCCCCCCcceecccCCCCccCCCceeCcCCccccc
Q 025899 188 NEPTYC-VCNQVS---YGEMVACDNPNCKIEWFHFGCVGLKEQPKGKWYCPDCAALKN 241 (246)
Q Consensus 188 ~~~~~C-~C~~~~---~g~mi~Cd~~~C~~~wfH~~Cv~l~~~~~~~w~C~~C~~~~~ 241 (246)
.+..+| +|+.+. .+.||.||. |+ .|||+.|+|++..|.|.|||+.|...+.
T Consensus 14 ~~~~~C~vC~~~~s~~~~~ll~CD~--C~-~~~H~~Cl~~~~vP~g~W~C~~C~~~~~ 68 (71)
T 2ku3_A 14 DEDAVCSICMDGESQNSNVILFCDM--CN-LAVHQECYGVPYIPEGQWLCRHCLQSRA 68 (71)
T ss_dssp CSSCSCSSSCCCCCCSSSCEEECSS--SC-CEEEHHHHTCSSCCSSCCCCHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCEEECCC--CC-CccccccCCCCcCCCCCcCCccCcCcCc
Confidence 345567 998773 468999999 77 8999999999999999999999986543
No 31
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=99.20 E-value=3.9e-12 Score=83.91 Aligned_cols=45 Identities=38% Similarity=1.040 Sum_probs=38.5
Q ss_pred ee-eeCCCC-CCCceecCCCCCCCcceecccC--CCCccCCCceeCcCCccc
Q 025899 192 YC-VCNQVS-YGEMVACDNPNCKIEWFHFGCV--GLKEQPKGKWYCPDCAAL 239 (246)
Q Consensus 192 ~C-~C~~~~-~g~mi~Cd~~~C~~~wfH~~Cv--~l~~~~~~~w~C~~C~~~ 239 (246)
+| +|++.. .++||.||. |+ .|||+.|+ +|+..|.+.|||+.|...
T Consensus 2 ~C~vC~~~~~~~~ll~Cd~--C~-~~~H~~Cl~p~l~~~P~g~W~C~~C~~~ 50 (51)
T 1f62_A 2 RCKVCRKKGEDDKLILCDE--CN-KAFHLFCLRPALYEVPDGEWQCPACQPA 50 (51)
T ss_dssp CCTTTCCSSCCSCCEECTT--TC-CEECHHHHCTTCCSCCSSCCSCTTTSCC
T ss_pred CCCCCCCCCCCCCEEECCC--CC-hhhCcccCCCCcCCCCCCcEECcCcccc
Confidence 46 898774 468999999 77 99999999 588899999999999753
No 32
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=99.18 E-value=1.6e-12 Score=90.18 Aligned_cols=42 Identities=29% Similarity=0.926 Sum_probs=36.2
Q ss_pred eeeCCCCC--CCceecC-CCCCCCcceecccCCCCcc--------CCCceeCcCCc
Q 025899 193 CVCNQVSY--GEMVACD-NPNCKIEWFHFGCVGLKEQ--------PKGKWYCPDCA 237 (246)
Q Consensus 193 C~C~~~~~--g~mi~Cd-~~~C~~~wfH~~Cv~l~~~--------~~~~w~C~~C~ 237 (246)
++|+++.+ ..||+|| . |. +|||+.||||+.. |.+.|+|+.|.
T Consensus 12 ~~C~~p~~~~~~mI~CD~~--C~-~WfH~~Cvglt~~~~~~l~~e~~~~w~C~~C~ 64 (65)
T 2vpb_A 12 GICTNEVNDDQDAILCEAS--CQ-KWFHRICTGMTETAYGLLTAEASAVWGCDTCM 64 (65)
T ss_dssp TTTCSBCCTTSCEEEBTTT--TC-CEEEHHHHTCCHHHHHHHHHCTTEEECCHHHH
T ss_pred ccCCCccCCCCCeEecccC--cc-ccCchhccCCCHHHHHHhhccCCCcEECcCcc
Confidence 49999864 4699999 7 77 9999999999983 67899999986
No 33
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=99.16 E-value=8.7e-13 Score=122.98 Aligned_cols=50 Identities=38% Similarity=1.002 Sum_probs=43.0
Q ss_pred CCCceeeeCCCCC--CCceecCCCCCCCcceecccCCCCccC---CCceeCcCCcccc
Q 025899 188 NEPTYCVCNQVSY--GEMVACDNPNCKIEWFHFGCVGLKEQP---KGKWYCPDCAALK 240 (246)
Q Consensus 188 ~~~~~C~C~~~~~--g~mi~Cd~~~C~~~wfH~~Cv~l~~~~---~~~w~C~~C~~~~ 240 (246)
..++||+|+++++ |.||+||. |. +|||+.|||++..+ .+.|+||.|....
T Consensus 3 ~~~~yCiC~~~~d~~~~MIqCD~--C~-~WfH~~CVgi~~~~~~~~~~y~C~~C~~~~ 57 (447)
T 3kv4_A 3 SVPVYCLCRLPYDVTRFMIECDM--CQ-DWFHGSCVGVEEEKAADIDLYHCPNCEVLH 57 (447)
T ss_dssp CCCEETTTTEECCTTSCEEECTT--TC-CEEEHHHHTCCHHHHTTEEECCCHHHHHHH
T ss_pred CCCeEEeCCCcCCCCCCeEEcCC--CC-cccccccCCcCcccccCCCEEECCCCcccc
Confidence 4589999999864 78999999 77 99999999999854 4789999997654
No 34
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.16 E-value=1.3e-11 Score=91.33 Aligned_cols=49 Identities=33% Similarity=0.899 Sum_probs=41.5
Q ss_pred CCcee-eeCCCCC-CCceecCCCCCCCcceecccCC--CCccCCCceeCcCCcccc
Q 025899 189 EPTYC-VCNQVSY-GEMVACDNPNCKIEWFHFGCVG--LKEQPKGKWYCPDCAALK 240 (246)
Q Consensus 189 ~~~~C-~C~~~~~-g~mi~Cd~~~C~~~wfH~~Cv~--l~~~~~~~w~C~~C~~~~ 240 (246)
+..+| +|++... +.||.||. |+ .|||+.|++ |+..|.++|||+.|....
T Consensus 15 ~~~~C~vC~~~~~~~~ll~CD~--C~-~~~H~~Cl~Ppl~~~P~g~W~C~~C~~~~ 67 (92)
T 2e6r_A 15 DSYICQVCSRGDEDDKLLFCDG--CD-DNYHIFCLLPPLPEIPRGIWRCPKCILAE 67 (92)
T ss_dssp CCCCCSSSCCSGGGGGCEECTT--TC-CEECSSSSSSCCSSCCSSCCCCHHHHHHH
T ss_pred CCCCCccCCCcCCCCCEEEcCC--CC-chhccccCCCCcccCCCCCcCCccCcCcc
Confidence 34567 9998753 57999999 77 999999999 888999999999997643
No 35
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=99.15 E-value=5.5e-12 Score=92.67 Aligned_cols=49 Identities=27% Similarity=0.733 Sum_probs=41.2
Q ss_pred Ccee-eeCCCC---CCCceecCCCCCCCcceecccCCCCccCCCceeCcCCccccc
Q 025899 190 PTYC-VCNQVS---YGEMVACDNPNCKIEWFHFGCVGLKEQPKGKWYCPDCAALKN 241 (246)
Q Consensus 190 ~~~C-~C~~~~---~g~mi~Cd~~~C~~~wfH~~Cv~l~~~~~~~w~C~~C~~~~~ 241 (246)
..+| +|+.+. .+.||.||. |+ .|||+.|++++..|.|.|||+.|.....
T Consensus 25 ~~~C~vC~~~~s~~~~~ll~CD~--C~-~~fH~~Cl~p~~vP~g~W~C~~C~~~~~ 77 (88)
T 2l43_A 25 DAVCSICMDGESQNSNVILFCDM--CN-LAVHQECYGVPYIPEGQWLCRHCLQSRA 77 (88)
T ss_dssp CCCCSSCCSSSSCSEEEEEECSS--SC-CCCCHHHHTCSSCCSSCCCCHHHHHHTT
T ss_pred CCcCCcCCCCCCCCCCCEEECCC--CC-chhhcccCCCCccCCCceECccccCccc
Confidence 4456 999873 358999999 77 8999999999989999999999986543
No 36
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=99.09 E-value=4.9e-11 Score=82.89 Aligned_cols=46 Identities=24% Similarity=0.608 Sum_probs=39.5
Q ss_pred Ccee-eeCCCCCCCceecCCCCCCCcceecccCC--CCccCCCceeCcCCcccc
Q 025899 190 PTYC-VCNQVSYGEMVACDNPNCKIEWFHFGCVG--LKEQPKGKWYCPDCAALK 240 (246)
Q Consensus 190 ~~~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cv~--l~~~~~~~w~C~~C~~~~ 240 (246)
...| +|+.. |+||.||. |+ .|||+.|+. |...|.+.|||+.|....
T Consensus 12 ~~~C~vC~~~--~~ll~Cd~--C~-~~~H~~Cl~P~l~~~P~g~W~C~~C~~~~ 60 (66)
T 2lri_C 12 GARCGVCGDG--TDVLRCTH--CA-AAFHWRCHFPAGTSRPGTGLRCRSCSGDV 60 (66)
T ss_dssp TCCCTTTSCC--TTCEECSS--SC-CEECHHHHCTTTCCCCSSSCCCTTTTTCC
T ss_pred CCCcCCCCCC--CeEEECCC--CC-CceecccCCCccCcCCCCCEECccccCCC
Confidence 4557 99865 88999999 77 999999995 888999999999998654
No 37
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=99.06 E-value=5.2e-11 Score=82.62 Aligned_cols=56 Identities=25% Similarity=0.668 Sum_probs=43.5
Q ss_pred CCCCCcee-eeCCCC---CCCceecCCCCCCCcceecccCCCC--c---cCCCceeCcCCccccccCC
Q 025899 186 DPNEPTYC-VCNQVS---YGEMVACDNPNCKIEWFHFGCVGLK--E---QPKGKWYCPDCAALKNRRK 244 (246)
Q Consensus 186 ~~~~~~~C-~C~~~~---~g~mi~Cd~~~C~~~wfH~~Cv~l~--~---~~~~~w~C~~C~~~~~~~~ 244 (246)
++.+..+| +|+... .+.||.||. |. .|||+.|++.. . .|.+.|||+.|......||
T Consensus 2 ~~~~~~~C~vC~~~~~~~~~~ll~Cd~--C~-~~~H~~C~~p~l~~~~~~p~~~W~C~~C~~~~~~kr 66 (66)
T 2yt5_A 2 SSGSSGVCTICQEEYSEAPNEMVICDK--CG-QGYHQLCHTPHIDSSVIDSDEKWLCRQCVFATTTKR 66 (66)
T ss_dssp CCCCCCCBSSSCCCCCBTTBCEEECSS--SC-CEEETTTSSSCCCHHHHHSSCCCCCHHHHHTTSCCC
T ss_pred CCCCCCCCCCCCCCCCCCCCCEEECCC--CC-hHHHhhhCCCcccccccCCCCCEECCCCcCccccCC
Confidence 34456677 999873 378999999 77 99999999953 3 2889999999987665543
No 38
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=99.04 E-value=2.3e-10 Score=83.58 Aligned_cols=48 Identities=35% Similarity=0.981 Sum_probs=41.6
Q ss_pred CCCcee-eeCCCCCCCceecCCCCCCCcceecccC--CCCccCCCceeCcCCcccc
Q 025899 188 NEPTYC-VCNQVSYGEMVACDNPNCKIEWFHFGCV--GLKEQPKGKWYCPDCAALK 240 (246)
Q Consensus 188 ~~~~~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cv--~l~~~~~~~w~C~~C~~~~ 240 (246)
.+..+| +|+.. |+||.||. |+ ..||+.|+ +|+..|.|.|||+.|...+
T Consensus 23 ~n~~~C~vC~~~--g~LL~CD~--C~-~~fH~~Cl~PpL~~~P~g~W~C~~C~~~~ 73 (88)
T 1fp0_A 23 DSATICRVCQKP--GDLVMCNQ--CE-FCFHLDCHLPALQDVPGEEWSCSLCHVLP 73 (88)
T ss_dssp SSSSCCSSSCSS--SCCEECTT--SS-CEECTTSSSTTCCCCCSSSCCCCSCCCCC
T ss_pred CCCCcCcCcCCC--CCEEECCC--CC-CceecccCCCCCCCCcCCCcCCccccCCC
Confidence 345688 99987 79999999 88 89999999 7888999999999998654
No 39
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=98.97 E-value=2.3e-10 Score=80.37 Aligned_cols=43 Identities=33% Similarity=0.909 Sum_probs=37.0
Q ss_pred eeCCCC-CCCceecCCCCCCCcceecccCC--CCccCCC-ceeCcCCccc
Q 025899 194 VCNQVS-YGEMVACDNPNCKIEWFHFGCVG--LKEQPKG-KWYCPDCAAL 239 (246)
Q Consensus 194 ~C~~~~-~g~mi~Cd~~~C~~~wfH~~Cv~--l~~~~~~-~w~C~~C~~~ 239 (246)
+|++.. .+.||.||. |+ .|||+.|++ |+..|.| .|||+.|..+
T Consensus 23 ~C~~~~~~~~ll~CD~--C~-~~yH~~Cl~Ppl~~~P~g~~W~C~~C~~~ 69 (70)
T 3asl_A 23 LCGGRQDPDKQLMCDE--CD-MAFHIYCLDPPLSSVPSEDEWYCPECRND 69 (70)
T ss_dssp TTCCCSCGGGEEECTT--TC-CEEEGGGSSSCCSSCCSSSCCCCTTTSCC
T ss_pred CCCCcCCCCCEEEcCC--CC-CceecccCCCCcCCCCCCCCcCCcCccCc
Confidence 667654 478999999 77 999999999 8889999 9999999753
No 40
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.91 E-value=7.3e-10 Score=79.22 Aligned_cols=44 Identities=34% Similarity=0.954 Sum_probs=38.3
Q ss_pred ee-eeCCCC-CCCceecCCCCCCCcceecccCC--CCccCCC-ceeCcCCcc
Q 025899 192 YC-VCNQVS-YGEMVACDNPNCKIEWFHFGCVG--LKEQPKG-KWYCPDCAA 238 (246)
Q Consensus 192 ~C-~C~~~~-~g~mi~Cd~~~C~~~wfH~~Cv~--l~~~~~~-~w~C~~C~~ 238 (246)
.| +|++.. .+.||.||. |+ .+||+.|++ |+..|.| .|||+.|..
T Consensus 28 ~C~vC~~~~~~~~ll~CD~--C~-~~yH~~Cl~Ppl~~~P~g~~W~C~~C~~ 76 (77)
T 2e6s_A 28 SCRVCGGKHEPNMQLLCDE--CN-VAYHIYCLNPPLDKVPEEEYWYCPSCKT 76 (77)
T ss_dssp SCSSSCCCCCSTTEEECSS--SC-CEEETTSSSSCCSSCCCSSCCCCTTTCC
T ss_pred CCcCcCCcCCCCCEEEcCC--CC-ccccccccCCCccCCCCCCCcCCcCccC
Confidence 45 888764 478999999 77 999999999 8889999 999999974
No 41
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=98.91 E-value=2.3e-10 Score=83.93 Aligned_cols=52 Identities=29% Similarity=0.854 Sum_probs=41.5
Q ss_pred CCCcee-eeCCCCC---CCceecCCCCCCCcceecccCC--CCc----cCCCceeCcCCcccccc
Q 025899 188 NEPTYC-VCNQVSY---GEMVACDNPNCKIEWFHFGCVG--LKE----QPKGKWYCPDCAALKNR 242 (246)
Q Consensus 188 ~~~~~C-~C~~~~~---g~mi~Cd~~~C~~~wfH~~Cv~--l~~----~~~~~w~C~~C~~~~~~ 242 (246)
++..+| +|++... +.||.||. |. ..||..|++ |.. .|.+.|||+.|.....+
T Consensus 14 e~~~~C~vC~~~~~~~~~~ll~CD~--C~-~~yH~~Cl~Ppl~~~~~~~p~g~W~C~~C~~~~~~ 75 (88)
T 1wev_A 14 EMGLACVVCRQMTVASGNQLVECQE--CH-NLYHQDCHKPQVTDKEVNDPRLVWYCARCTRQMKR 75 (88)
T ss_dssp HHCCSCSSSCCCCCCTTCCEEECSS--SC-CEEETTTSSSCCCHHHHHCTTCCCCCHHHHHHHCC
T ss_pred CCCCcCCCCCCCCCCCCCceEECCC--CC-CeEcCccCCCcccccccCCCCCCeeCccccchhhh
Confidence 345678 9998743 78999999 76 899999999 442 68999999999876544
No 42
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=98.79 E-value=1.1e-09 Score=83.98 Aligned_cols=49 Identities=29% Similarity=0.855 Sum_probs=41.2
Q ss_pred ee-eeCCCC-CCCceecCCCCCCCcceecccCC--CCccCCCceeCcCCccccccC
Q 025899 192 YC-VCNQVS-YGEMVACDNPNCKIEWFHFGCVG--LKEQPKGKWYCPDCAALKNRR 243 (246)
Q Consensus 192 ~C-~C~~~~-~g~mi~Cd~~~C~~~wfH~~Cv~--l~~~~~~~w~C~~C~~~~~~~ 243 (246)
+| +|++.. .+.||.||. |+ .|||+.|++ |+..|.|.|||+.|....+++
T Consensus 60 ~C~~C~~~~~~~~ll~Cd~--C~-~~yH~~Cl~ppl~~~P~g~W~C~~C~~~~~~k 112 (114)
T 2kwj_A 60 SCILCGTSENDDQLLFCDD--CD-RGYHMYCLNPPVAEPPEGSWSCHLCWELLKEK 112 (114)
T ss_dssp CCTTTTCCTTTTTEEECSS--SC-CEEETTTSSSCCSSCCSSCCCCHHHHHHHHHT
T ss_pred ccCcccccCCCCceEEcCC--CC-ccccccccCCCccCCCCCCeECccccchhhcc
Confidence 46 787764 478999999 77 999999999 888999999999998765544
No 43
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=98.74 E-value=4.6e-09 Score=75.02 Aligned_cols=42 Identities=33% Similarity=0.960 Sum_probs=35.7
Q ss_pred eeCCCCC-CCceecCCCCCCCcceecccCC--CCccCCCc-eeCcCCcc
Q 025899 194 VCNQVSY-GEMVACDNPNCKIEWFHFGCVG--LKEQPKGK-WYCPDCAA 238 (246)
Q Consensus 194 ~C~~~~~-g~mi~Cd~~~C~~~wfH~~Cv~--l~~~~~~~-w~C~~C~~ 238 (246)
+|++... +.||.||. |+ .+||+.|++ |...|.+. |||+.|+.
T Consensus 31 vC~~~~d~~~ll~CD~--C~-~~yH~~Cl~PpL~~~P~g~~W~C~~C~~ 76 (77)
T 3shb_A 31 LCGGRQDPDKQLMCDE--CD-MAFHIYCLDPPLSSVPSEDEWYCPECRN 76 (77)
T ss_dssp TTCCCSCGGGEEECTT--TC-CEEETTTSSSCCSSCCSSSCCCCTTTC-
T ss_pred ccCCCCCCcceeEeCC--CC-CccCcccCCCcccCCCCCCceECcCccc
Confidence 6666644 67999999 77 899999999 88899998 99999975
No 44
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=98.65 E-value=8.6e-09 Score=87.61 Aligned_cols=45 Identities=33% Similarity=0.938 Sum_probs=34.4
Q ss_pred ee-eeCCCC-CCCceecCCCCCCCcceecccCC--CCccCCC-ceeCcCCccc
Q 025899 192 YC-VCNQVS-YGEMVACDNPNCKIEWFHFGCVG--LKEQPKG-KWYCPDCAAL 239 (246)
Q Consensus 192 ~C-~C~~~~-~g~mi~Cd~~~C~~~wfH~~Cv~--l~~~~~~-~w~C~~C~~~ 239 (246)
.| +|++.. .+.||.||. |+ .|||+.|++ |+..|.| .||||.|...
T Consensus 176 ~C~vC~~~~~~~~lL~CD~--C~-~~yH~~CL~PPL~~vP~G~~W~Cp~C~~~ 225 (226)
T 3ask_A 176 ACHLCGGRQDPDKQLMCDE--CD-MAFHIYCLDPPLSSVPSEDEWYCPECRND 225 (226)
T ss_dssp SCSSSCCCCC--CCEECSS--SC-CEECSCC--CCCCSCCSSSCCCCGGGC--
T ss_pred CCcCCCCCCCCCCeEEcCC--CC-cceeCccCCCCcccCCCCCCCCCcCCcCc
Confidence 46 887764 478999999 77 899999999 8888999 9999999753
No 45
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=98.63 E-value=6.1e-09 Score=98.10 Aligned_cols=37 Identities=35% Similarity=1.049 Sum_probs=31.8
Q ss_pred CCceecCCCCCCCcceecccCCCCccC---CCceeCcCCcccc
Q 025899 201 GEMVACDNPNCKIEWFHFGCVGLKEQP---KGKWYCPDCAALK 240 (246)
Q Consensus 201 g~mi~Cd~~~C~~~wfH~~Cv~l~~~~---~~~w~C~~C~~~~ 240 (246)
..||+||+ |. +|||+.||||+..+ .++|+||.|....
T Consensus 56 ~~mI~CD~--C~-~WfH~~CVgi~~~~a~~~~~y~Cp~C~~~~ 95 (528)
T 3pur_A 56 FQWIGCDS--CQ-TWYHFLCSGLEQFEYYLYEKFFCPKCVPHT 95 (528)
T ss_dssp TSEEECTT--TC-CEEEGGGTTCCGGGTTTEEECCCTTTHHHH
T ss_pred CCEEECCC--CC-cCCCCcCCCCChhHhcCCCeEECcCCcCCC
Confidence 57999999 66 99999999999853 5899999998643
No 46
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=98.61 E-value=2.1e-08 Score=76.62 Aligned_cols=44 Identities=36% Similarity=0.936 Sum_probs=37.4
Q ss_pred ee-eeCCCC--CCCceecCCCCCCCcceecccC--CCCccCCCceeCcCCcc
Q 025899 192 YC-VCNQVS--YGEMVACDNPNCKIEWFHFGCV--GLKEQPKGKWYCPDCAA 238 (246)
Q Consensus 192 ~C-~C~~~~--~g~mi~Cd~~~C~~~wfH~~Cv--~l~~~~~~~w~C~~C~~ 238 (246)
+| +|+... .+.||.||. |+ .+||+.|+ .|...|.+.|||+.|+.
T Consensus 63 ~C~vC~~~~~~~~~ll~Cd~--C~-~~yH~~Cl~p~l~~~P~~~W~C~~C~~ 111 (112)
T 3v43_A 63 TCSSCRDQGKNADNMLFCDS--CD-RGFHMECCDPPLTRMPKGMWICQICRP 111 (112)
T ss_dssp CBTTTCCCCCTTCCCEECTT--TC-CEECGGGCSSCCSSCCSSCCCCTTTSC
T ss_pred ccccccCcCCCccceEEcCC--CC-CeeecccCCCCCCCCCCCCeECCCCCC
Confidence 56 787653 368999999 77 99999999 58889999999999975
No 47
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=98.38 E-value=8e-08 Score=73.05 Aligned_cols=45 Identities=31% Similarity=0.852 Sum_probs=37.5
Q ss_pred ee-eeCCCCC-CCceecCCCCCCCcceecccCC--CCccCCCceeCcCCccc
Q 025899 192 YC-VCNQVSY-GEMVACDNPNCKIEWFHFGCVG--LKEQPKGKWYCPDCAAL 239 (246)
Q Consensus 192 ~C-~C~~~~~-g~mi~Cd~~~C~~~wfH~~Cv~--l~~~~~~~w~C~~C~~~ 239 (246)
+| +|++... ..||.||. |. .|||..|++ |+..|.+.|||+.|...
T Consensus 56 ~C~~C~~~~~~~~ll~Cd~--C~-~~yH~~Cl~ppl~~~P~g~W~C~~C~~c 104 (111)
T 2ysm_A 56 VCQNCKQSGEDSKMLVCDT--CD-KGYHTFCLQPVMKSVPTNGWKCKNCRIC 104 (111)
T ss_dssp CCTTTCCCSCCTTEEECSS--SC-CEEEGGGSSSCCSSCCSSCCCCHHHHCC
T ss_pred cccccCccCCCCCeeECCC--CC-cHHhHHhcCCccccCCCCCcCCcCCcCc
Confidence 46 7877643 46999999 77 999999998 88889999999999654
No 48
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=98.32 E-value=9.1e-08 Score=79.13 Aligned_cols=37 Identities=27% Similarity=0.861 Sum_probs=30.5
Q ss_pred CCceecCCCCCCCcceecccCCCCcc--------C-CCceeCcCCcccc
Q 025899 201 GEMVACDNPNCKIEWFHFGCVGLKEQ--------P-KGKWYCPDCAALK 240 (246)
Q Consensus 201 g~mi~Cd~~~C~~~wfH~~Cv~l~~~--------~-~~~w~C~~C~~~~ 240 (246)
+.||+||. |. .|||..|+|++.. | ...|+||.|+...
T Consensus 19 ~~MIqCd~--C~-~W~H~~Cvgi~~~~~e~~~~~pe~~~y~Cp~C~~~~ 64 (183)
T 3lqh_A 19 SKMMQCGK--CD-RWVHSKCENLSDEMYEILSNLPESVAYTCVNCTERH 64 (183)
T ss_dssp CCEEECTT--TC-CEEEGGGSSCCHHHHHHHHHSHHHHCCCCTTTCCSS
T ss_pred CCeEECCC--CC-cccchhccccCHHHHHHhhcCCCCCeeECcCCCCCC
Confidence 57999999 66 9999999999862 2 2479999998654
No 49
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A
Probab=98.14 E-value=4.7e-07 Score=71.75 Aligned_cols=46 Identities=28% Similarity=0.754 Sum_probs=38.8
Q ss_pred Ccee-eeCCCCCCCceecCCCCCCCcceecccCC--CC-----c--cCCCceeCcCCcccc
Q 025899 190 PTYC-VCNQVSYGEMVACDNPNCKIEWFHFGCVG--LK-----E--QPKGKWYCPDCAALK 240 (246)
Q Consensus 190 ~~~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cv~--l~-----~--~~~~~w~C~~C~~~~ 240 (246)
..|| +|... |++|+||. || .-||..|+. |. . .|.+.|+|+.|...+
T Consensus 63 ~d~C~vC~~G--G~LlcCD~--Cp-r~Fh~~Cl~p~l~~~~l~~i~~p~~~W~C~~C~~~p 118 (142)
T 2lbm_A 63 DEQCRWCAEG--GNLICCDF--CH-NAFCKKCILRNLGRKELSTIMDENNQWYCYICHPEP 118 (142)
T ss_dssp BCSCSSSCCC--SSEEECSS--SC-CEEEHHHHHHHTCHHHHHHHHTSTTCCCCTTTCCCT
T ss_pred CCeecccCCC--CcEEeCCC--CC-CeeeHhhcCCCCChhhhhhcccCCCCCEeecccCcc
Confidence 5689 99987 99999999 99 899999988 32 2 478999999998654
No 50
>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A
Probab=98.09 E-value=3.5e-07 Score=71.33 Aligned_cols=49 Identities=27% Similarity=0.666 Sum_probs=40.3
Q ss_pred CCCcee-eeCCCCCCCceecCCCCCCCcceecccCC-------CCcc--CCCceeCcCCccccc
Q 025899 188 NEPTYC-VCNQVSYGEMVACDNPNCKIEWFHFGCVG-------LKEQ--PKGKWYCPDCAALKN 241 (246)
Q Consensus 188 ~~~~~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cv~-------l~~~--~~~~w~C~~C~~~~~ 241 (246)
....|| +|..+ |++|+||. || .-||..|+. +... |.+.|+|+.|..++.
T Consensus 55 g~~~~C~vC~dG--G~LlcCd~--Cp-r~Fc~~Cl~~~lg~~~l~~i~~~~~~W~C~~C~~~pl 113 (129)
T 3ql9_A 55 GMDEQCRWCAEG--GNLICCDF--CH-NAFCKKCILRNLGRRELSTIMDENNQWYCYICHPEPL 113 (129)
T ss_dssp SCBSSCTTTCCC--SEEEECSS--SS-CEEEHHHHHHHTCHHHHHHHTCTTSCCCCTTTCCGGG
T ss_pred CCCCcCeecCCC--CeeEecCC--Cc-hhhhHHHhCCCcchhHHHHhccCCCCeEcCCcCCHHH
Confidence 345689 99987 99999998 99 899999987 2333 789999999987654
No 51
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=98.09 E-value=2.5e-06 Score=64.69 Aligned_cols=45 Identities=27% Similarity=0.829 Sum_probs=37.1
Q ss_pred Ccee-eeCCCCC-CCceecCCCCCCCcceecccCCCCccC--CCceeCcCCc
Q 025899 190 PTYC-VCNQVSY-GEMVACDNPNCKIEWFHFGCVGLKEQP--KGKWYCPDCA 237 (246)
Q Consensus 190 ~~~C-~C~~~~~-g~mi~Cd~~~C~~~wfH~~Cv~l~~~~--~~~w~C~~C~ 237 (246)
..+| +|+.... .+||.|+. |+ ..||+.|+++...+ .+.|+|+.|.
T Consensus 7 ~~~C~~C~~~g~~~~ll~C~~--C~-~~~H~~Cl~~~~~~~~~~~W~C~~C~ 55 (111)
T 2ysm_A 7 GANCAVCDSPGDLLDQFFCTT--CG-QHYHGMCLDIAVTPLKRAGWQCPECK 55 (111)
T ss_dssp CSCBTTTCCCCCTTTSEECSS--SC-CEECTTTTTCCCCTTTSTTCCCTTTC
T ss_pred CCCCcCCCCCCCCcCCeECCC--CC-CCcChHHhCCccccccccCccCCcCC
Confidence 4567 9998754 56899999 88 99999999977754 6899999984
No 52
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=98.00 E-value=1.2e-06 Score=67.00 Aligned_cols=43 Identities=33% Similarity=0.747 Sum_probs=34.9
Q ss_pred ee-eeCCCC--------CCCceecCCCCCCCcceecccCCCC-----ccCCCceeCcCCc
Q 025899 192 YC-VCNQVS--------YGEMVACDNPNCKIEWFHFGCVGLK-----EQPKGKWYCPDCA 237 (246)
Q Consensus 192 ~C-~C~~~~--------~g~mi~Cd~~~C~~~wfH~~Cv~l~-----~~~~~~w~C~~C~ 237 (246)
+| +|.++. .++||.|+. |+ ..||..|+++. ..+.+.|+|+.|.
T Consensus 3 ~C~~C~~~~~~n~k~g~~~~Li~C~~--C~-~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 59 (114)
T 2kwj_A 3 YCDFCLGGSNMNKKSGRPEELVSCAD--CG-RSGHPTCLQFTLNMTEAVKTYKWQCIECK 59 (114)
T ss_dssp CCSSSCCBTTBCTTTCCCCCCEECSS--SC-CEECTTTTTCCHHHHHHHHHTTCCCGGGC
T ss_pred cCccCCCCccccccCCCCCCCeEeCC--CC-CccchhhCCChhhhhhccCCCccCccccC
Confidence 67 787653 258999999 88 99999999987 3567899999884
No 53
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=97.99 E-value=2.4e-06 Score=71.76 Aligned_cols=48 Identities=25% Similarity=0.747 Sum_probs=32.8
Q ss_pred CCcee-eeCCCCCCCceecCCCCCCCcceec-ccCCCCccCCCceeCcCCcccc
Q 025899 189 EPTYC-VCNQVSYGEMVACDNPNCKIEWFHF-GCVGLKEQPKGKWYCPDCAALK 240 (246)
Q Consensus 189 ~~~~C-~C~~~~~g~mi~Cd~~~C~~~wfH~-~Cv~l~~~~~~~w~C~~C~~~~ 240 (246)
+..+| +|+++ |+||+||+ |+..++.. -=.+|...|.|.|+||.|....
T Consensus 6 ~~~~C~~C~~~--g~ll~Cd~--C~~~~H~~Cl~p~l~~~p~~~W~C~~C~~~~ 55 (207)
T 3u5n_A 6 NEDWCAVCQNG--GDLLCCEK--CPKVFHLTCHVPTLLSFPSGDWICTFCRDIG 55 (207)
T ss_dssp SCSSBTTTCCC--EEEEECSS--SSCEECTTTSSSCCSSCCSSCCCCTTTSCSS
T ss_pred CCCCCCCCCCC--CceEEcCC--CCCccCCccCCCCCCCCCCCCEEeCceeCcc
Confidence 34578 99977 78999999 88000000 0005888999999999998653
No 54
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=97.92 E-value=1.8e-06 Score=65.77 Aligned_cols=44 Identities=23% Similarity=0.674 Sum_probs=35.3
Q ss_pred cee-eeCCCC-------CCCceecCCCCCCCcceecccCCCCc-----cCCCceeCcCCc
Q 025899 191 TYC-VCNQVS-------YGEMVACDNPNCKIEWFHFGCVGLKE-----QPKGKWYCPDCA 237 (246)
Q Consensus 191 ~~C-~C~~~~-------~g~mi~Cd~~~C~~~wfH~~Cv~l~~-----~~~~~w~C~~C~ 237 (246)
.+| +|.+.. .++||.|+. |+ .+||.+|+++.. .+.+.|+|+.|.
T Consensus 6 ~~C~~C~~~~~~~~~g~~~~Ll~C~~--C~-~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 62 (112)
T 3v43_A 6 PICSFCLGTKEQNREKKPEELISCAD--CG-NSGHPSCLKFSPELTVRVKALRWQCIECK 62 (112)
T ss_dssp SSBTTTCCCTTCCTTSCCCCCEECTT--TC-CEECHHHHTCCHHHHHHHHTSCCCCTTTC
T ss_pred ccccccCCchhhCcCCCchhceEhhh--cC-CCCCCchhcCCHHHHHHhhccccccccCC
Confidence 467 887642 358999999 88 999999999752 467899999995
No 55
>3rsn_A SET1/ASH2 histone methyltransferase complex subun; PHD domain, winged helix domain, binding, transcription; 2.10A {Homo sapiens} PDB: 3s32_A
Probab=97.54 E-value=4.6e-05 Score=62.27 Aligned_cols=48 Identities=17% Similarity=0.361 Sum_probs=30.3
Q ss_pred CCceeeeCCCCC--CCceecCCCCCCCcceecccCCCCc---cCC---CceeCcCCccc
Q 025899 189 EPTYCVCNQVSY--GEMVACDNPNCKIEWFHFGCVGLKE---QPK---GKWYCPDCAAL 239 (246)
Q Consensus 189 ~~~~C~C~~~~~--g~mi~Cd~~~C~~~wfH~~Cv~l~~---~~~---~~w~C~~C~~~ 239 (246)
+..||+|+.+.. -.|++|+. |. .|||..|+.... .|- =.|.|..|...
T Consensus 4 ~~~yCYCG~~~~~~~~mLqC~~--C~-qWFH~~Cl~~~~~~~lp~~~fY~F~C~~C~~~ 59 (177)
T 3rsn_A 4 QAGSVDEENGRQLGEVELQCGI--CT-KWFTADTFGIDTSSCLPFMTNYSFHCNVCHHS 59 (177)
T ss_dssp -------CTTCCTTSCEEECTT--TC-CEEEGGGGTCCCTTCCTTCCSEEEECTTTSTT
T ss_pred eeeEEEcCCCCCCCceeEeecc--cc-ceecHHHhcccccCccccceeEEEEccccCCC
Confidence 357999998743 36999999 88 999999998433 231 24679999763
No 56
>4bbq_A Lysine-specific demethylase 2A; oxidoreductase, ubiquitin, ligase, ubiquitination, demethyla ZF-CXXC DNA binding domain, CPG island, chromatin; 2.24A {Homo sapiens}
Probab=97.17 E-value=0.00021 Score=54.34 Aligned_cols=36 Identities=28% Similarity=0.770 Sum_probs=27.7
Q ss_pred CceecCCCCCCCcceecccCCCCcc------CCCceeCcCCcccc
Q 025899 202 EMVACDNPNCKIEWFHFGCVGLKEQ------PKGKWYCPDCAALK 240 (246)
Q Consensus 202 ~mi~Cd~~~C~~~wfH~~Cv~l~~~------~~~~w~C~~C~~~~ 240 (246)
.||.|+. |. .|||..|+++... .++.|+||.|....
T Consensus 74 ~m~~C~~--C~-~~~H~~C~~~~~~~~~~~~~~~~~~C~~C~~~~ 115 (117)
T 4bbq_A 74 KLMECCI--CN-EIVHPGCLQMDGEGLLNEELPNCWECPKCYQED 115 (117)
T ss_dssp SCEEETT--TC-CEECGGGCCSCCCCEECSSSSSEEECTTTC---
T ss_pred ceEEeee--cC-CeEECCCCCCCccccccccCCCCeECCCCcCCC
Confidence 4999999 66 9999999997642 35679999998654
No 57
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=95.48 E-value=0.014 Score=41.60 Aligned_cols=46 Identities=26% Similarity=0.702 Sum_probs=36.0
Q ss_pred Ccee-eeCCCCCCCceecCCCCCCCcceecccCC--------------CCccCCCceeCcCCcc
Q 025899 190 PTYC-VCNQVSYGEMVACDNPNCKIEWFHFGCVG--------------LKEQPKGKWYCPDCAA 238 (246)
Q Consensus 190 ~~~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cv~--------------l~~~~~~~w~C~~C~~ 238 (246)
...| ||..-..+.++.|.. |. .-||..|+. +.+.+..-|.|+.|..
T Consensus 15 D~~C~VC~~~t~~~l~pCRv--C~-RvfH~~CL~r~gy~~~~~a~e~~l~A~T~~GWSC~~Cen 75 (89)
T 1wil_A 15 DEMCDVCEVWTAESLFPCRV--CT-RVFHDGCLRRMGYIQGDSAAEVTEMAHTETGWSCHYCDN 75 (89)
T ss_dssp SCCCTTTCCCCSSCCSSCSS--SS-SCCCHHHHHHHTSCCCCCCCSCSCCCSSSSSCCCTTTCC
T ss_pred CcccCccccccccceecccc--cc-ccccHhhcccccccccHHHHHHHHccCCCCCccccccch
Confidence 4467 999888889999999 77 899999964 1123467899999953
No 58
>3a1b_A DNA (cytosine-5)-methyltransferase 3A, histone H3; zinc-finger, histone binding, chromosomal protein, DNA damag repair, DNA-binding, methylation; HET: DNA; 2.29A {Homo sapiens} PDB: 3a1a_A*
Probab=94.56 E-value=0.0081 Score=48.07 Aligned_cols=49 Identities=31% Similarity=0.697 Sum_probs=39.1
Q ss_pred CCcee-eeCCCCCCCceecCCCCCCCcceecccCCCCc--------cCCCceeCcCCcccc
Q 025899 189 EPTYC-VCNQVSYGEMVACDNPNCKIEWFHFGCVGLKE--------QPKGKWYCPDCAALK 240 (246)
Q Consensus 189 ~~~~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cv~l~~--------~~~~~w~C~~C~~~~ 240 (246)
-..|| ||... |++|.|||.+|+ .-|=..||.+.- ...+.|.|--|.+.+
T Consensus 78 ~~~yC~wC~~G--g~l~~Cdn~~C~-r~FC~~CI~~nvG~~~~~~i~~~d~W~Cy~C~P~~ 135 (159)
T 3a1b_A 78 YQSYCTICCGG--REVLMCGNNNCC-RCFCVECVDLLVGPGAAQAAIKEDPWNCYMCGHKG 135 (159)
T ss_dssp SBSSCTTTSCC--SEEEECSSTTTC-CEEEHHHHHHHTCTTHHHHHHTSSSCCCTTTCSSC
T ss_pred CcceeeEecCC--CeEEeeCCCCCC-CchhHHHHHHhcCHhHHHHHhccCCCEEEecCCcc
Confidence 46799 99977 899999988899 889999965222 246899999998765
No 59
>2pv0_B DNA (cytosine-5)-methyltransferase 3-like; DNMT3L, unmethylated H3K4, de novo DNA methylation, transferase regulator; HET: DNA; 3.30A {Homo sapiens} PDB: 2pvc_B*
Probab=93.76 E-value=0.016 Score=52.64 Aligned_cols=49 Identities=27% Similarity=0.754 Sum_probs=39.1
Q ss_pred CCcee-eeCCCCCCCceecCCCCCCCcceecccCCCCcc--------CCCceeCcCCcccc
Q 025899 189 EPTYC-VCNQVSYGEMVACDNPNCKIEWFHFGCVGLKEQ--------PKGKWYCPDCAALK 240 (246)
Q Consensus 189 ~~~~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cv~l~~~--------~~~~w~C~~C~~~~ 240 (246)
-..|| +|..+ |++|.|||.+|+ .-|=..|+...-- ..+.|.|--|...+
T Consensus 92 ~~~yCr~C~~G--g~l~~Cdn~~C~-r~FC~~Ci~~n~g~~~~~~i~~~d~W~Cf~C~p~p 149 (386)
T 2pv0_B 92 YQSYCSICCSG--ETLLICGNPDCT-RCYCFECVDSLVGPGTSGKVHAMSNWVCYLCLPSS 149 (386)
T ss_dssp SBCSCTTTCCC--SSCEECCSTTCC-CEECHHHHHHHTCTTHHHHHHHCSSCCCTTTSSCC
T ss_pred CcccceEcCCC--CeEEEeCCCCCC-cchHHHHHHHhcChhHHHHhhccCCceEEEcCCcc
Confidence 46799 99987 899999988899 8888999763221 25889999998765
No 60
>2lq6_A Bromodomain-containing protein 1; PHD finger, metal binding protein; NMR {Homo sapiens}
Probab=92.62 E-value=0.036 Score=39.85 Aligned_cols=30 Identities=33% Similarity=0.854 Sum_probs=25.7
Q ss_pred cee-eeCCCCCCCceecCCCCCCCcceecccC
Q 025899 191 TYC-VCNQVSYGEMVACDNPNCKIEWFHFGCV 221 (246)
Q Consensus 191 ~~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cv 221 (246)
+-| +|++...|--|+|....|. .+||+.|.
T Consensus 18 l~C~iC~~~~~GAciqC~~~~C~-~~fHv~CA 48 (87)
T 2lq6_A 18 LTCYLCKQKGVGASIQCHKANCY-TAFHVTCA 48 (87)
T ss_dssp CCBTTTTBCCSSCEEECSCTTTC-CEEEHHHH
T ss_pred CCCcCCCCCCCcEeEecCCCCCC-CcCcHHHH
Confidence 346 9987767889999999999 99999994
No 61
>2xzr_A Immunoglobulin-binding protein EIBD; cell adhesion, trimeric autotransporter adhesin, TAA; 2.80A {Enterobacteria phage p-eibd}
Probab=92.51 E-value=2.2 Score=30.93 Aligned_cols=96 Identities=14% Similarity=0.249 Sum_probs=63.4
Q ss_pred HHHHHHHhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCchhhHHHHHHHHHHHHHHHHH
Q 025899 4 LDEFQANLESLPNILQKKYALLRDLDKSLQEIQRQNEQRCEQEIEDLMREIRAGNITPNTSLIRFSDDALDEQKHSIRIA 83 (246)
Q Consensus 4 Le~fle~l~~LP~El~r~l~~IreLD~~~~~~~~~~~~~~~~~l~~~~k~~~~gs~~~~~~~~~l~~~I~~~~~~~~~l~ 83 (246)
+|+.|+.|-.|..+..|.=..|..+|.++..-...++..... +....+.++. .+.+...++++|.+..++..++.
T Consensus 8 ~~~~~~~~~~~~~~~~ri~~aig~~d~ri~~NtqaI~~NS~a-iaanTr~lQq----h~aRlnsqQrQI~ENhkEMKq~a 82 (114)
T 2xzr_A 8 IEEILSKIYHIENEIARIKKLIGAIDGRVTRNTQSIEKNSKA-IAANTRTLQQ----HSARLDSQQRQINENHKEMKQIE 82 (114)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcchHHHHHHHHhhhhHHHHhhHHHHHhchHH-HHHhHHHHHH----HHHHHHhHHHHHHHHHHHHHHHH
Confidence 577888999999999999999999999987654444422221 1111111111 12345567788999999998888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 025899 84 DEKVALAVQAYDLVDTHIQQLD 105 (246)
Q Consensus 84 dEKv~LA~q~~dlVd~hirrLD 105 (246)
+.=-+|+...|-+ ++-+.||.
T Consensus 83 aqsaaLlsk~yh~-ene~ar~k 103 (114)
T 2xzr_A 83 DKIEEILSKIYHI-ENEIARIK 103 (114)
T ss_dssp HHHHHHHHHHHHH-HHHHHHHH
T ss_pred HHHHHHHHHhhHH-HHHHHHHH
Confidence 8888888887753 34444443
No 62
>1vyx_A ORF K3, K3RING; zinc-binding protein, ring domain, cross-brace motif; NMR {Human herpesvirus 8} SCOP: g.44.1.3
Probab=90.03 E-value=0.029 Score=37.41 Aligned_cols=49 Identities=20% Similarity=0.405 Sum_probs=29.6
Q ss_pred CCcee-eeCCCCCCCceecCCCCCC--CcceecccCCCCccCCCceeCcCCccc
Q 025899 189 EPTYC-VCNQVSYGEMVACDNPNCK--IEWFHFGCVGLKEQPKGKWYCPDCAAL 239 (246)
Q Consensus 189 ~~~~C-~C~~~~~g~mi~Cd~~~C~--~~wfH~~Cv~l~~~~~~~w~C~~C~~~ 239 (246)
+...| ||.....+.+| .-|.|. ..|||..|+.-=-...+.+.||.|...
T Consensus 5 ~~~~CrIC~~~~~~~l~--~PC~C~gs~~~~H~~Cl~~W~~~~~~~~C~~C~~~ 56 (60)
T 1vyx_A 5 DVPVCWICNEELGNERF--RACGCTGELENVHRSCLSTWLTISRNTACQICGVV 56 (60)
T ss_dssp SCCEETTTTEECSCCCC--CSCCCSSGGGSCCHHHHHHHHHHHTCSBCTTTCCB
T ss_pred CCCEeEEeecCCCCcee--cCcCCCCchhhhHHHHHHHHHHhCCCCccCCCCCe
Confidence 35567 88765434443 233465 149999998611112346899999754
No 63
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=85.13 E-value=0.36 Score=33.84 Aligned_cols=47 Identities=17% Similarity=0.500 Sum_probs=28.2
Q ss_pred Ccee-eeCCCCC-C-CceecCCCCCC--CcceecccCC--CCccCCCceeCcCCcccc
Q 025899 190 PTYC-VCNQVSY-G-EMVACDNPNCK--IEWFHFGCVG--LKEQPKGKWYCPDCAALK 240 (246)
Q Consensus 190 ~~~C-~C~~~~~-g-~mi~Cd~~~C~--~~wfH~~Cv~--l~~~~~~~w~C~~C~~~~ 240 (246)
...| ||..... + .+| --|.|. ..|||..|+. |.. .+...||.|+..-
T Consensus 15 ~~~C~IC~~~~~~~~~l~--~pC~C~Gs~h~fH~~Cl~~Wl~~--~~~~~CplCr~~~ 68 (80)
T 2d8s_A 15 QDICRICHCEGDDESPLI--TPCHCTGSLHFVHQACLQQWIKS--SDTRCCELCKYEF 68 (80)
T ss_dssp SCCCSSSCCCCCSSSCEE--CSSSCCSSSCCEETTHHHHHHHH--HCCSBCSSSCCBC
T ss_pred CCCCeEcCccccCCCeeE--eccccCCcCCeeCHHHHHHHHhh--CCCCCCCCCCCee
Confidence 4456 8875432 3 344 233344 2799999986 322 2346899997653
No 64
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=83.70 E-value=1.2 Score=29.59 Aligned_cols=50 Identities=20% Similarity=0.527 Sum_probs=30.9
Q ss_pred CCCcee-eeCCCCCCCceecCCCCCCCcceecccCCCCc-cCCCceeCcCCcccccc
Q 025899 188 NEPTYC-VCNQVSYGEMVACDNPNCKIEWFHFGCVGLKE-QPKGKWYCPDCAALKNR 242 (246)
Q Consensus 188 ~~~~~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cv~l~~-~~~~~w~C~~C~~~~~~ 242 (246)
.+...| ||.......++. . |. ..||..|+.--. ...+...||.|+..-..
T Consensus 18 ~~~~~C~IC~~~~~~~~~~--~--Cg-H~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~ 69 (73)
T 2ysl_A 18 QEEVICPICLDILQKPVTI--D--CG-HNFCLKCITQIGETSCGFFKCPLCKTSVRK 69 (73)
T ss_dssp CCCCBCTTTCSBCSSEEEC--T--TC-CEEEHHHHHHHCSSSCSCCCCSSSCCCCCC
T ss_pred ccCCEeccCCcccCCeEEc--C--CC-ChhhHHHHHHHHHcCCCCCCCCCCCCcCCc
Confidence 345668 998764332222 4 66 679999986211 22356789999876543
No 65
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=83.41 E-value=5.8 Score=37.21 Aligned_cols=30 Identities=7% Similarity=0.045 Sum_probs=15.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 025899 16 NILQKKYALLRDLDKSLQEIQRQNEQRCEQ 45 (246)
Q Consensus 16 ~El~r~l~~IreLD~~~~~~~~~~~~~~~~ 45 (246)
-+|...+.+||..=..++...+.+++....
T Consensus 60 rDltkrINELKnqLEdlsKnsKdseqy~k~ 89 (562)
T 3ghg_A 60 QDFTNRINKLKNSLFEYQKNNKDSHSLTTN 89 (562)
T ss_dssp HHHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHhhchhHHHHHHH
Confidence 445555555555544445555555554444
No 66
>2zqm_A Prefoldin beta subunit 1; chaperone; HET: CIT; 1.90A {Thermococcus SP} PDB: 2zdi_A
Probab=82.49 E-value=8.2 Score=28.16 Aligned_cols=104 Identities=13% Similarity=0.228 Sum_probs=59.4
Q ss_pred hcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHhhhCCCCCCchhhHHHH--HHHHHHHHHHHHHHHHH
Q 025899 12 ESLPNILQKKYALLRDLDKSLQEIQRQNEQRCEQEIE--DLMREIRAGNITPNTSLIRFSD--DALDEQKHSIRIADEKV 87 (246)
Q Consensus 12 ~~LP~El~r~l~~IreLD~~~~~~~~~~~~~~~~~l~--~~~k~~~~gs~~~~~~~~~l~~--~I~~~~~~~~~l~dEKv 87 (246)
+++|.+++..+..+..+-.+++.+..++.......-. .....+ ..+.++.+.-...- -|......+...-++++
T Consensus 2 ~~~~~e~Q~~i~~~~~l~~~~~~l~~q~~~l~~~~~e~~~~~~eL--~~l~~d~~vy~~iG~vfv~~~~~ea~~~L~~~~ 79 (117)
T 2zqm_A 2 QNIPPQVQAMLGQLESYQQQLQLVVQQKQKVQLELTEAKKALDEI--ESLPDDAVVYKTVGTLIVKTTKDKAVAELKEKI 79 (117)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTSCTTCCEEEEETTEEEEECHHHHHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HcCCCCcHhHHHhhHHHhhccHHHHHHHHHHHH
Confidence 3789999999999999999988887777665444211 111111 12222211100000 01122334444445555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 025899 88 ALAVQAYDLVDTHIQQLDQYLKNFDEELRR 117 (246)
Q Consensus 88 ~LA~q~~dlVd~hirrLD~dl~kfe~eL~~ 117 (246)
.-......-++..+..+...+..+...|.+
T Consensus 80 e~ie~~i~~le~~~~~l~~~l~~lk~~l~~ 109 (117)
T 2zqm_A 80 ETLEVRLNALERQEKKLNEKLKELTAQIQS 109 (117)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555666677777777778888777776654
No 67
>1deq_A Fibrinogen (alpha chain); coiled-coil, blood clotting; 3.50A {Bos taurus} SCOP: i.9.1.1
Probab=80.25 E-value=26 Score=31.49 Aligned_cols=44 Identities=11% Similarity=0.013 Sum_probs=18.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHH
Q 025899 65 LIRFSDDALDEQKHSIRIADEKVALAVQAYDL---VDTHIQQLDQYL 108 (246)
Q Consensus 65 ~~~l~~~I~~~~~~~~~l~dEKv~LA~q~~dl---Vd~hirrLD~dl 108 (246)
...+..+|+..+.-+++--++.|.....+... +-..|+|||.+|
T Consensus 111 ~~e~s~eLe~~i~~lk~~V~~q~~~ir~Lq~~l~~q~~kiqRLE~~I 157 (390)
T 1deq_A 111 FKQINEDLRSRIEILRRKVIEQVQRINLLQKNVRDQLVDMKRLEVDI 157 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444444444444444444422222222 223555665555
No 68
>1weq_A PHD finger protein 7; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=78.71 E-value=2.3 Score=30.22 Aligned_cols=46 Identities=26% Similarity=0.683 Sum_probs=34.6
Q ss_pred CceeeeCCC-CC----C--CceecCCCCCCCcceecccCCCCccCCCceeCcCCcc
Q 025899 190 PTYCVCNQV-SY----G--EMVACDNPNCKIEWFHFGCVGLKEQPKGKWYCPDCAA 238 (246)
Q Consensus 190 ~~~C~C~~~-~~----g--~mi~Cd~~~C~~~wfH~~Cv~l~~~~~~~w~C~~C~~ 238 (246)
...|+|.++ .+ | +||.|.. |.-.--|..|..|.. ....|.|..|..
T Consensus 26 A~~Clc~~GR~~~~~~~~W~L~lC~~--Cgs~gtH~~Cs~l~~-~~~~weC~~C~~ 78 (85)
T 1weq_A 26 APICLYEQGRDSFEDEGRWRLILCAT--CGSHGTHRDCSSLRP-NSKKWECNECLP 78 (85)
T ss_dssp CSCCCSTTCSSCCBSSSTTBCEECSS--SCCCEECSGGGTCCT-TCSCCCCTTTSC
T ss_pred ccccCCCCCcccccCCCCEEEEeCcc--cCCchhHHHHhCCcC-CCCCEECCcCcc
Confidence 456888654 22 2 5899999 666779999999864 346899999975
No 69
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=78.32 E-value=0.84 Score=30.17 Aligned_cols=45 Identities=31% Similarity=0.525 Sum_probs=27.4
Q ss_pred CCcee-eeCCCCC-CCceecCCCCCCCcceecccCC--CCccCCCceeCcCCcccc
Q 025899 189 EPTYC-VCNQVSY-GEMVACDNPNCKIEWFHFGCVG--LKEQPKGKWYCPDCAALK 240 (246)
Q Consensus 189 ~~~~C-~C~~~~~-g~mi~Cd~~~C~~~wfH~~Cv~--l~~~~~~~w~C~~C~~~~ 240 (246)
+...| ||..... +..+..-. |. ..||..|+. +.. ...||.|+..-
T Consensus 13 ~~~~C~IC~~~~~~~~~~~~~~--C~-H~fc~~Ci~~~~~~----~~~CP~Cr~~~ 61 (69)
T 2kiz_A 13 TEEKCTICLSILEEGEDVRRLP--CM-HLFHQVCVDQWLIT----NKKCPICRVDI 61 (69)
T ss_dssp CCCSBTTTTBCCCSSSCEEECT--TS-CEEEHHHHHHHHHH----CSBCTTTCSBS
T ss_pred CCCCCeeCCccccCCCcEEEeC--CC-CHHHHHHHHHHHHc----CCCCcCcCccc
Confidence 34567 9976532 33333344 66 679999986 222 23599998654
No 70
>1m1j_C Fibrinogen gamma chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_C
Probab=77.63 E-value=42 Score=30.51 Aligned_cols=101 Identities=12% Similarity=0.146 Sum_probs=48.4
Q ss_pred HHHHHHHhhc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhC-CCCCCchhhHHHHHHHHHH-----
Q 025899 4 LDEFQANLES-LPNILQKKYALLRDLDKSLQEIQRQNEQRCEQEIEDLMREIRAG-NITPNTSLIRFSDDALDEQ----- 76 (246)
Q Consensus 4 Le~fle~l~~-LP~El~r~l~~IreLD~~~~~~~~~~~~~~~~~l~~~~k~~~~g-s~~~~~~~~~l~~~I~~~~----- 76 (246)
|.+||...+. ||.+|+..-..+++++....+ +.+.... +......+ ...++. .+.....+.+.+
T Consensus 25 i~d~L~k~e~~V~~~l~~LE~~l~elsn~ts~----v~~Lvk~----iq~~~~~~Q~~~~d~-~e~~tq~skkml~~~~~ 95 (409)
T 1m1j_C 25 IADFFNKYRLTTDGELLEIEGLLQQATNSTGS----IEYLIQH----IKTIYPSEKQTLPQS-IEQLTQKSKKIIEEIIR 95 (409)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHH----HHHHSCSSTTCCSSC-HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcchhHHHHHHHHHHHHHHHHHH----HHHHHHH----HHHhcccccCCCCCc-hhhHHHHHHHHHHHHHH
Confidence 5677777765 777777776666666665554 2222222 21111111 111111 111111222222
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 025899 77 -KHSIRIADEKVALAVQAYDLVDTHIQQLDQYLKNFDE 113 (246)
Q Consensus 77 -~~~~~l~dEKv~LA~q~~dlVd~hirrLD~dl~kfe~ 113 (246)
...+.-.++.|...+..+...+..|..|...+..++.
T Consensus 96 ~e~~~~~~~~~i~~l~~~~~~~~~~i~~l~~~i~~l~~ 133 (409)
T 1m1j_C 96 YENTILAHENTIQQLTDMHIMNSNKITQLKQKIAQLES 133 (409)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHhcchHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 2333344455665666666666666666666666654
No 71
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=76.73 E-value=1.1 Score=30.50 Aligned_cols=48 Identities=25% Similarity=0.542 Sum_probs=29.6
Q ss_pred CCCcee-eeCCCCCCCceecCCCCCCCcceecccCCC--Cc--cCCCceeCcCCcccc
Q 025899 188 NEPTYC-VCNQVSYGEMVACDNPNCKIEWFHFGCVGL--KE--QPKGKWYCPDCAALK 240 (246)
Q Consensus 188 ~~~~~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cv~l--~~--~~~~~w~C~~C~~~~ 240 (246)
.+...| +|.......++. . |. ..||..|+.- .. ...+...||.|+..-
T Consensus 17 ~~~~~C~IC~~~~~~p~~~--~--Cg-H~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~ 69 (85)
T 2ecv_A 17 KEEVTCPICLELLTQPLSL--D--CG-HSFCQACLTANHKKSMLDKGESSCPVCRISY 69 (85)
T ss_dssp CCCCCCTTTCSCCSSCBCC--S--SS-CCBCTTHHHHHHHHHHHTTSCCCCTTTCCSS
T ss_pred cCCCCCCCCCcccCCceeC--C--CC-CHHHHHHHHHHHHHhhcCCCCCcCCCCCCcc
Confidence 345667 998764333222 3 55 6799999862 11 134578899998654
No 72
>3k1l_B Fancl; UBC, ring, RWD, ligase; HET: MAL CIT; 3.20A {Drosophila melanogaster}
Probab=76.63 E-value=1.7 Score=38.98 Aligned_cols=49 Identities=33% Similarity=0.575 Sum_probs=30.3
Q ss_pred Ccee-eeCCC--CCCCc--eecCCCCCCCcceecccCC--CCccC-------CCceeCcCCccc
Q 025899 190 PTYC-VCNQV--SYGEM--VACDNPNCKIEWFHFGCVG--LKEQP-------KGKWYCPDCAAL 239 (246)
Q Consensus 190 ~~~C-~C~~~--~~g~m--i~Cd~~~C~~~wfH~~Cv~--l~~~~-------~~~w~C~~C~~~ 239 (246)
..-| ||-.. ..|.+ ..|++..|. .-||..|+- +...+ .-.--||.|+.+
T Consensus 308 ~~ECaICys~~l~~g~lPdk~C~n~~C~-h~FH~~CL~kWLrs~~~sRqSFnvi~G~CPyCr~p 370 (381)
T 3k1l_B 308 ELRCNICFAYRLDGGEVPLVSCDNAKCV-LKCHAVCLEEWFKTLMDGKTFLEVSFGQCPFCKAK 370 (381)
T ss_dssp CCSCSSSCCSSCTTCCCCCBCCSCTTCC-CCBCSGGGHHHHHHHHSSSCTTTCCEEECTTTCCE
T ss_pred CccCcccceeecCCCCCccccccCCccC-CccchHHHHHHHHhCCCccccccccCCCCCCCCCc
Confidence 4456 77543 23544 579987788 789999984 21111 123459999865
No 73
>1x64_A Alpha-actinin-2 associated LIM protein; LIM domain, PDZ and LIM domain 3, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.39.1.3 g.39.1.3
Probab=76.11 E-value=3.8 Score=28.49 Aligned_cols=47 Identities=26% Similarity=0.546 Sum_probs=29.8
Q ss_pred CCcee-eeCCCCCCCceecCCCCCCCcceecccCC-------CCcc----CCCceeCcCCcccc
Q 025899 189 EPTYC-VCNQVSYGEMVACDNPNCKIEWFHFGCVG-------LKEQ----PKGKWYCPDCAALK 240 (246)
Q Consensus 189 ~~~~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cv~-------l~~~----~~~~w~C~~C~~~~ 240 (246)
....| .|+++-++.+|.-.+ ..||..|.. |... ..+..||..|....
T Consensus 24 ~~~~C~~C~~~I~~~~~~a~~-----~~~H~~CF~C~~C~~~L~~~~~~~~~g~~yC~~~y~~~ 82 (89)
T 1x64_A 24 RMPLCDKCGSGIVGAVVKARD-----KYRHPECFVCADCNLNLKQKGYFFVEGELYCETHARAR 82 (89)
T ss_dssp SCCBCTTTCCBCCSCCEESSS-----CEECTTTCCCSSSCCCTTTSCCEEETTEEECHHHHHHH
T ss_pred cCCCcccCCCEecccEEEECC-----ceECccCCEecCCCCCCCCCCeEeECCEEECHHHHHHH
Confidence 34568 999887776666554 456887754 2221 25788898886543
No 74
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=75.90 E-value=2.5 Score=28.49 Aligned_cols=47 Identities=28% Similarity=0.434 Sum_probs=27.4
Q ss_pred CCcee-eeCCCCC-CCceecCCCCCCCcceecccCCCCccCCCceeCcCCcccc
Q 025899 189 EPTYC-VCNQVSY-GEMVACDNPNCKIEWFHFGCVGLKEQPKGKWYCPDCAALK 240 (246)
Q Consensus 189 ~~~~C-~C~~~~~-g~mi~Cd~~~C~~~wfH~~Cv~l~~~~~~~w~C~~C~~~~ 240 (246)
+...| ||..... +..+.--. |. ..||..|+.--.. ....||.|+..-
T Consensus 14 ~~~~C~IC~~~~~~~~~~~~~~--C~-H~fc~~Ci~~~~~--~~~~CP~Cr~~~ 62 (78)
T 2ect_A 14 SGLECPVCKEDYALGESVRQLP--CN-HLFHDSCIVPWLE--QHDSCPVCRKSL 62 (78)
T ss_dssp SSCCCTTTTSCCCTTSCEEECT--TS-CEEETTTTHHHHT--TTCSCTTTCCCC
T ss_pred CCCCCeeCCccccCCCCEEEeC--CC-CeecHHHHHHHHH--cCCcCcCcCCcc
Confidence 34567 9976533 33322223 55 6799999861111 225899998654
No 75
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=75.62 E-value=20 Score=33.56 Aligned_cols=10 Identities=10% Similarity=0.371 Sum_probs=4.8
Q ss_pred HHHHHHHHHH
Q 025899 99 THIQQLDQYL 108 (246)
Q Consensus 99 ~hirrLD~dl 108 (246)
..|+||+.||
T Consensus 145 ~kIQRLEvDI 154 (562)
T 3ghg_A 145 VDMKRLEVDI 154 (562)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3455555444
No 76
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=74.53 E-value=2.4 Score=28.67 Aligned_cols=48 Identities=27% Similarity=0.612 Sum_probs=29.3
Q ss_pred CCCcee-eeCCCCCCCceecCCCCCCCcceecccCCC--Cc--cCCCceeCcCCcccc
Q 025899 188 NEPTYC-VCNQVSYGEMVACDNPNCKIEWFHFGCVGL--KE--QPKGKWYCPDCAALK 240 (246)
Q Consensus 188 ~~~~~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cv~l--~~--~~~~~w~C~~C~~~~ 240 (246)
.+...| +|.......++. . |. ..||..|+.- .. ...+...||.|+..-
T Consensus 17 ~~~~~C~IC~~~~~~p~~~--~--Cg-H~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~ 69 (85)
T 2ecw_A 17 KEEVTCPICLELLKEPVSA--D--CN-HSFCRACITLNYESNRNTDGKGNCPVCRVPY 69 (85)
T ss_dssp CTTTSCTTTCSCCSSCEEC--T--TS-CCBCHHHHHHHHHHSBCTTSCBCCTTTCCCC
T ss_pred ccCCCCcCCChhhCcceeC--C--CC-CHHHHHHHHHHHHhccCCCCCCCCCCCCCcC
Confidence 345678 998764333321 2 55 5689999762 11 123578999998654
No 77
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=73.01 E-value=1.2 Score=32.63 Aligned_cols=32 Identities=25% Similarity=0.674 Sum_probs=21.6
Q ss_pred CCCcceecccCC--CCcc-CCCceeCcCCccccccC
Q 025899 211 CKIEWFHFGCVG--LKEQ-PKGKWYCPDCAALKNRR 243 (246)
Q Consensus 211 C~~~wfH~~Cv~--l~~~-~~~~w~C~~C~~~~~~~ 243 (246)
|. .+||..|+. +... +.....||.|+..-..+
T Consensus 61 C~-H~Fh~~Ci~~wl~~~~~~~~~~CP~CR~~~~~~ 95 (114)
T 1v87_A 61 CS-HAFHLLCLLAMYCNGNKDGSLQCPSCKTIYGEK 95 (114)
T ss_dssp SC-CEECHHHHHHHHHHTCCSSCCBCTTTCCBSSSC
T ss_pred CC-CcccHHHHHHHHHcccCCCCCcCCCCCCccCCC
Confidence 66 789999986 3211 23567899998765443
No 78
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=72.40 E-value=1.1 Score=30.19 Aligned_cols=47 Identities=17% Similarity=0.478 Sum_probs=28.6
Q ss_pred CCcee-eeCCCCCCCceecCCCCCCCcceecccCCCCccCCCceeCcCCccc
Q 025899 189 EPTYC-VCNQVSYGEMVACDNPNCKIEWFHFGCVGLKEQPKGKWYCPDCAAL 239 (246)
Q Consensus 189 ~~~~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cv~l~~~~~~~w~C~~C~~~ 239 (246)
+...| +|....... +.-.. |. ..||..|+.---...+...||.|+..
T Consensus 14 ~~~~C~IC~~~~~~p-~~~~~--Cg-H~fC~~Ci~~~~~~~~~~~CP~Cr~~ 61 (74)
T 2yur_A 14 DELLCLICKDIMTDA-VVIPC--CG-NSYCDECIRTALLESDEHTCPTCHQN 61 (74)
T ss_dssp GGGSCSSSCCCCTTC-EECSS--SC-CEECTTHHHHHHHHSSSSCCSSSCCS
T ss_pred CCCCCcCCChHHhCC-eEcCC--CC-CHHHHHHHHHHHHhcCCCcCCCCCCc
Confidence 45567 998764433 33233 55 67999998522221235689999875
No 79
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=72.36 E-value=1.2 Score=30.64 Aligned_cols=48 Identities=17% Similarity=0.329 Sum_probs=29.2
Q ss_pred CCcee-eeCCCCCC-C--ceecCCCCCCCcceecccCCCC-ccCCCceeCcCCcccc
Q 025899 189 EPTYC-VCNQVSYG-E--MVACDNPNCKIEWFHFGCVGLK-EQPKGKWYCPDCAALK 240 (246)
Q Consensus 189 ~~~~C-~C~~~~~g-~--mi~Cd~~~C~~~wfH~~Cv~l~-~~~~~~w~C~~C~~~~ 240 (246)
+...| +|...... + .+.- . |. ..||..|+.-- ....+...||.|+..-
T Consensus 14 ~~~~C~IC~~~~~~~~~~~~~~-~--Cg-H~fC~~Ci~~~~~~~~~~~~CP~Cr~~~ 66 (88)
T 2ct2_A 14 EVLECPICMESFTEEQLRPKLL-H--CG-HTICRQCLEKLLASSINGVRCPFCSKIT 66 (88)
T ss_dssp SCCBCTTTCCBCCTTSSCEEEC-S--SS-CEEEHHHHHHHHHHCSSCBCCTTTCCCB
T ss_pred CCCCCccCCccccccCCCeEEC-C--CC-ChhhHHHHHHHHHcCCCCcCCCCCCCcc
Confidence 34568 99876432 1 2221 3 66 78999998621 1223468899998754
No 80
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=71.93 E-value=1.8 Score=28.89 Aligned_cols=44 Identities=27% Similarity=0.492 Sum_probs=26.6
Q ss_pred Ccee-eeCCCCC-CCceecCCCCCCCcceecccCC--CCccCCCceeCcCCcccc
Q 025899 190 PTYC-VCNQVSY-GEMVACDNPNCKIEWFHFGCVG--LKEQPKGKWYCPDCAALK 240 (246)
Q Consensus 190 ~~~C-~C~~~~~-g~mi~Cd~~~C~~~wfH~~Cv~--l~~~~~~~w~C~~C~~~~ 240 (246)
...| ||..... +..+.--. |. ..||..|+. +.. ...||.|+..-
T Consensus 15 ~~~C~IC~~~~~~~~~~~~~~--C~-H~f~~~Ci~~~~~~----~~~CP~Cr~~~ 62 (74)
T 2ep4_A 15 HELCAVCLEDFKPRDELGICP--CK-HAFHRKCLIKWLEV----RKVCPLCNMPV 62 (74)
T ss_dssp SCBCSSSCCBCCSSSCEEEET--TT-EEEEHHHHHHHHHH----CSBCTTTCCBC
T ss_pred CCCCcCCCcccCCCCcEEEcC--CC-CEecHHHHHHHHHc----CCcCCCcCccc
Confidence 4467 9987643 33332123 66 789999985 222 13799998653
No 81
>1deq_A Fibrinogen (alpha chain); coiled-coil, blood clotting; 3.50A {Bos taurus} SCOP: i.9.1.1
Probab=71.87 E-value=56 Score=29.34 Aligned_cols=43 Identities=19% Similarity=0.258 Sum_probs=17.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 025899 71 DALDEQKHSIRIADEKVALAVQAYDLVDTHIQQLDQYLKNFDE 113 (246)
Q Consensus 71 ~I~~~~~~~~~l~dEKv~LA~q~~dlVd~hirrLD~dl~kfe~ 113 (246)
++..++.+=+.+-++||.---+-+-++..-|+.+-.+|++||.
T Consensus 113 e~s~eLe~~i~~lk~~V~~q~~~ir~Lq~~l~~q~~kiqRLE~ 155 (390)
T 1deq_A 113 QINEDLRSRIEILRRKVIEQVQRINLLQKNVRDQLVDMKRLEV 155 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444444444444433333333333333333444444443
No 82
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=71.26 E-value=2 Score=27.68 Aligned_cols=44 Identities=23% Similarity=0.603 Sum_probs=26.0
Q ss_pred CCCcee-eeCCCCCCCceecCCCCCCCcceecccCCCCc-cCCCceeCcCC
Q 025899 188 NEPTYC-VCNQVSYGEMVACDNPNCKIEWFHFGCVGLKE-QPKGKWYCPDC 236 (246)
Q Consensus 188 ~~~~~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cv~l~~-~~~~~w~C~~C 236 (246)
.+...| ||.......++. . |. ..||..|+.--. .......||.|
T Consensus 18 ~~~~~C~IC~~~~~~p~~~--~--Cg-H~fC~~Ci~~~~~~~~~~~~CP~C 63 (63)
T 2ysj_A 18 QEEVICPICLDILQKPVTI--D--CG-HNFCLKCITQIGETSCGFFKCPLC 63 (63)
T ss_dssp CCCCBCTTTCSBCSSCEEC--T--TS-SEECHHHHHHHHHHCSSCCCCSCC
T ss_pred ccCCCCCcCCchhCCeEEe--C--CC-CcchHHHHHHHHHcCCCCCcCcCC
Confidence 345667 998764433332 4 66 679999986111 12345678877
No 83
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=70.75 E-value=1.5 Score=29.43 Aligned_cols=48 Identities=29% Similarity=0.480 Sum_probs=29.1
Q ss_pred CCcee-eeCCCC-CCCceecCCCCCCCcceecccCCCCccCCCceeCcCCccccc
Q 025899 189 EPTYC-VCNQVS-YGEMVACDNPNCKIEWFHFGCVGLKEQPKGKWYCPDCAALKN 241 (246)
Q Consensus 189 ~~~~C-~C~~~~-~g~mi~Cd~~~C~~~wfH~~Cv~l~~~~~~~w~C~~C~~~~~ 241 (246)
+...| ||.... .++.+..-. |. ..||..|+.---. ....||.|+..-.
T Consensus 22 ~~~~C~IC~~~~~~~~~~~~l~--C~-H~fh~~Ci~~w~~--~~~~CP~Cr~~~~ 71 (75)
T 1x4j_A 22 EQTLCVVCMCDFESRQLLRVLP--CN-HEFHAKCVDKWLK--ANRTCPICRADSG 71 (75)
T ss_dssp SCCEETTTTEECCBTCEEEEET--TT-EEEETTHHHHHHH--HCSSCTTTCCCCC
T ss_pred CCCCCeECCcccCCCCeEEEEC--CC-CHhHHHHHHHHHH--cCCcCcCcCCcCC
Confidence 34567 998653 244444444 65 6799999851111 1247999986543
No 84
>2e61_A Zinc finger CW-type PWWP domain protein 1; ZF-CW domain, structural genomics, NPPSFA, national project protein structural and functional analyses; NMR {Homo sapiens} PDB: 2rr4_A*
Probab=70.18 E-value=3.2 Score=28.29 Aligned_cols=33 Identities=24% Similarity=0.625 Sum_probs=20.2
Q ss_pred CCceecCCCCCCCcceecccCCCC-ccCCCceeCcC
Q 025899 201 GEMVACDNPNCKIEWFHFGCVGLK-EQPKGKWYCPD 235 (246)
Q Consensus 201 g~mi~Cd~~~C~~~wfH~~Cv~l~-~~~~~~w~C~~ 235 (246)
...|+||+..|. .|=.+.= ++. ..-.++|||..
T Consensus 16 ~~WVQCd~p~C~-KWR~LP~-~~~~~~lpd~W~C~m 49 (69)
T 2e61_A 16 LVWVQCSFPNCG-KWRRLCG-NIDPSVLPDNWSCDQ 49 (69)
T ss_dssp CCEEECSSTTTC-CEEECCS-SCCTTTSCTTCCGGG
T ss_pred CeEEEeCccccC-cccCCcc-ccccccCCCcCEeCC
Confidence 357999955588 8865422 111 11247899964
No 85
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=68.18 E-value=3.2 Score=27.49 Aligned_cols=44 Identities=25% Similarity=0.370 Sum_probs=26.4
Q ss_pred Ccee-eeCCCCCCCceecCCCCCCCcceecccCCCCccCCCceeCcCCcccc
Q 025899 190 PTYC-VCNQVSYGEMVACDNPNCKIEWFHFGCVGLKEQPKGKWYCPDCAALK 240 (246)
Q Consensus 190 ~~~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cv~l~~~~~~~w~C~~C~~~~ 240 (246)
...| ||..... +.+.. . |. ..||..|+.--.. ....||.|+..-
T Consensus 15 ~~~C~IC~~~~~-~~~~~-~--Cg-H~fC~~Ci~~~~~--~~~~CP~Cr~~~ 59 (71)
T 2d8t_A 15 VPECAICLQTCV-HPVSL-P--CK-HVFCYLCVKGASW--LGKRCALCRQEI 59 (71)
T ss_dssp CCBCSSSSSBCS-SEEEE-T--TT-EEEEHHHHHHCTT--CSSBCSSSCCBC
T ss_pred CCCCccCCcccC-CCEEc-c--CC-CHHHHHHHHHHHH--CCCcCcCcCchh
Confidence 4567 9986643 22222 3 66 6799999851111 126899998653
No 86
>2yf2_A C4B binding protein; immune system, complement system; 2.24A {Gallus gallus}
Probab=67.72 E-value=22 Score=22.93 Aligned_cols=44 Identities=14% Similarity=0.184 Sum_probs=36.4
Q ss_pred HHHHh---hcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 025899 7 FQANL---ESLPNILQKKYALLRDLDKSLQEIQRQNEQRCEQEIEDL 50 (246)
Q Consensus 7 fle~l---~~LP~El~r~l~~IreLD~~~~~~~~~~~~~~~~~l~~~ 50 (246)
|++++ -+||.+=-|.|-+||.|=..+|.+..++.-...++++.+
T Consensus 15 yiqsvv~DC~~P~~~~rTLLEi~KL~LEIQKL~~EL~glskeflehi 61 (65)
T 2yf2_A 15 YIQSVVSDCHVPTEDVKTLLEIRKLFLEIQKLKVELQGLSKEFLEHI 61 (65)
T ss_dssp HHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHcchhHHHHHHH
Confidence 45544 379999999999999999999999988888888887765
No 87
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=67.62 E-value=2.7 Score=27.27 Aligned_cols=46 Identities=26% Similarity=0.601 Sum_probs=27.7
Q ss_pred CCcee-eeCCCCC-----CCceecCCCCCCCcceecccCC--CCccCCCceeCcCCccccc
Q 025899 189 EPTYC-VCNQVSY-----GEMVACDNPNCKIEWFHFGCVG--LKEQPKGKWYCPDCAALKN 241 (246)
Q Consensus 189 ~~~~C-~C~~~~~-----g~mi~Cd~~~C~~~wfH~~Cv~--l~~~~~~~w~C~~C~~~~~ 241 (246)
+...| ||..... +.++..-. |. ..||..|+. +.. ...||.|+..-.
T Consensus 14 ~~~~C~IC~~~~~~~~~~~~~~~~~~--Cg-H~fc~~Ci~~~~~~----~~~CP~Cr~~~~ 67 (69)
T 2ea6_A 14 GTVSCPICMDGYSEIVQNGRLIVSTE--CG-HVFCSQCLRDSLKN----ANTCPTCRKKIN 67 (69)
T ss_dssp CCCCCTTTCCCHHHHTTTTCCEEECS--SS-CEEEHHHHHHHHHH----CSSCTTTCCCCC
T ss_pred CCCCCcccCccccccccccCCeEeCC--CC-ChhcHHHHHHHHHc----CCCCCCCCCccC
Confidence 34567 9976522 23333344 55 679999985 211 247999987643
No 88
>1m1j_A Fibrinogen alpha subunit; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: h.1.8.1 PDB: 1ei3_A
Probab=66.55 E-value=81 Score=29.08 Aligned_cols=43 Identities=19% Similarity=0.262 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 025899 74 DEQKHSIRIADEKVALAVQAYDLVDTHIQQLDQYLKNFDEELR 116 (246)
Q Consensus 74 ~~~~~~~~l~dEKv~LA~q~~dlVd~hirrLD~dl~kfe~eL~ 116 (246)
.++.+=+.+-++||.---+-+.++...|+.+=.+|++||.++.
T Consensus 114 ~eLe~ri~yIK~kVd~qi~~IrvLq~~l~~q~skIQRLE~dI~ 156 (491)
T 1m1j_A 114 TELRRRIVTLKQRVATQVNRIKALQNSIQEQVVEMKRLEVDID 156 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333344444433224445555555566666666665543
No 89
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=66.10 E-value=3.1 Score=25.81 Aligned_cols=45 Identities=29% Similarity=0.459 Sum_probs=26.0
Q ss_pred Ccee-eeCCCCC-CC-ceecCCCCCCCcceecccCCCCccCCCceeCcCCccc
Q 025899 190 PTYC-VCNQVSY-GE-MVACDNPNCKIEWFHFGCVGLKEQPKGKWYCPDCAAL 239 (246)
Q Consensus 190 ~~~C-~C~~~~~-g~-mi~Cd~~~C~~~wfH~~Cv~l~~~~~~~w~C~~C~~~ 239 (246)
...| +|..... ++ .+.... |. ..||..|+.--. .....||.|+..
T Consensus 5 ~~~C~IC~~~~~~~~~~~~~~~--C~-H~f~~~Ci~~w~--~~~~~CP~Cr~~ 52 (55)
T 1iym_A 5 GVECAVCLAELEDGEEARFLPR--CG-HGFHAECVDMWL--GSHSTCPLCRLT 52 (55)
T ss_dssp SCCCTTTCCCCCTTSCCEECSS--SC-CEECTTHHHHTT--TTCCSCSSSCCC
T ss_pred CCcCccCCccccCCCceEECCC--CC-CcccHHHHHHHH--HcCCcCcCCCCE
Confidence 3456 8876532 32 233333 55 689999985111 124579999754
No 90
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=65.39 E-value=2 Score=30.18 Aligned_cols=46 Identities=26% Similarity=0.617 Sum_probs=27.7
Q ss_pred CCcee-eeCCCC-CCCceecCCCCCCCcceecccCCCCccCCCceeCcCCccc
Q 025899 189 EPTYC-VCNQVS-YGEMVACDNPNCKIEWFHFGCVGLKEQPKGKWYCPDCAAL 239 (246)
Q Consensus 189 ~~~~C-~C~~~~-~g~mi~Cd~~~C~~~wfH~~Cv~l~~~~~~~w~C~~C~~~ 239 (246)
+...| ||.... .++.+..-. |. ..||..|+.---. ....||.|+..
T Consensus 39 ~~~~C~IC~~~~~~~~~~~~l~--C~-H~Fh~~Ci~~wl~--~~~~CP~Cr~~ 86 (91)
T 2l0b_A 39 QEMCCPICCSEYVKGDVATELP--CH-HYFHKPCVSIWLQ--KSGTCPVCRCM 86 (91)
T ss_dssp SCSEETTTTEECCTTCEEEEET--TT-EEEEHHHHHHHHT--TTCBCTTTCCB
T ss_pred CCCCCcccChhhcCCCcEEecC--CC-ChHHHHHHHHHHH--cCCcCcCcCcc
Confidence 34567 997553 244333334 66 6899999861111 23489999865
No 91
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=64.96 E-value=3.8 Score=25.59 Aligned_cols=43 Identities=21% Similarity=0.472 Sum_probs=24.7
Q ss_pred CCcee-eeCCCCCCCceecCCCCCCCcceecccCCCCc-cCCCceeCcCC
Q 025899 189 EPTYC-VCNQVSYGEMVACDNPNCKIEWFHFGCVGLKE-QPKGKWYCPDC 236 (246)
Q Consensus 189 ~~~~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cv~l~~-~~~~~w~C~~C 236 (246)
+...| ||.......++. . |. ..||..|+.--. .......||.|
T Consensus 14 ~~~~C~IC~~~~~~p~~~--~--Cg-H~fC~~Ci~~~~~~~~~~~~CP~C 58 (58)
T 2ecj_A 14 VEASCSVCLEYLKEPVII--E--CG-HNFCKACITRWWEDLERDFPCPVC 58 (58)
T ss_dssp CCCBCSSSCCBCSSCCCC--S--SC-CCCCHHHHHHHTTSSCCSCCCSCC
T ss_pred cCCCCccCCcccCccEeC--C--CC-CccCHHHHHHHHHhcCCCCCCCCC
Confidence 35567 998764432221 2 55 569999976211 11345778877
No 92
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=64.75 E-value=2.5 Score=28.75 Aligned_cols=45 Identities=22% Similarity=0.466 Sum_probs=27.3
Q ss_pred CCCcee-eeCCCCCCCceecCCCCCCCcceecccCCCCccCCCceeCcCCccc
Q 025899 188 NEPTYC-VCNQVSYGEMVACDNPNCKIEWFHFGCVGLKEQPKGKWYCPDCAAL 239 (246)
Q Consensus 188 ~~~~~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cv~l~~~~~~~w~C~~C~~~ 239 (246)
.+...| +|.......++ -. |. ..||..|+.--.. ....||.|+..
T Consensus 13 ~~~~~C~IC~~~~~~p~~--~~--Cg-H~fC~~Ci~~~~~--~~~~CP~Cr~~ 58 (81)
T 2csy_A 13 EIPFRCFICRQAFQNPVV--TK--CR-HYFCESCALEHFR--ATPRCYICDQP 58 (81)
T ss_dssp CCCSBCSSSCSBCCSEEE--CT--TS-CEEEHHHHHHHHH--HCSBCSSSCCB
T ss_pred CCCCCCcCCCchhcCeeE--cc--CC-CHhHHHHHHHHHH--CCCcCCCcCcc
Confidence 345667 99876433222 23 66 6799999851111 14579999865
No 93
>2lk0_A RNA-binding protein 5; zinc finger; NMR {Homo sapiens} PDB: 2lk1_A*
Probab=64.35 E-value=3.2 Score=23.74 Aligned_cols=13 Identities=23% Similarity=0.777 Sum_probs=10.1
Q ss_pred CCceeCcCCcccc
Q 025899 228 KGKWYCPDCAALK 240 (246)
Q Consensus 228 ~~~w~C~~C~~~~ 240 (246)
.|+|+|+.|....
T Consensus 3 ~gDW~C~~C~~~N 15 (32)
T 2lk0_A 3 FEDWLCNKCCLNN 15 (32)
T ss_dssp CSEEECTTTCCEE
T ss_pred CCCCCcCcCcCCc
Confidence 5899999996544
No 94
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=61.15 E-value=5.3 Score=26.67 Aligned_cols=47 Identities=26% Similarity=0.547 Sum_probs=28.5
Q ss_pred CCcee-eeCCCCCCCceecCCCCCCCcceecccCCC--Ccc---CCCceeCcCCcccc
Q 025899 189 EPTYC-VCNQVSYGEMVACDNPNCKIEWFHFGCVGL--KEQ---PKGKWYCPDCAALK 240 (246)
Q Consensus 189 ~~~~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cv~l--~~~---~~~~w~C~~C~~~~ 240 (246)
+...| +|.......++. . |. ..||..|+.- ... ..+...||.|+..-
T Consensus 11 ~~~~C~IC~~~~~~p~~l--~--Cg-H~fC~~Ci~~~~~~~~~~~~~~~~CP~Cr~~~ 63 (79)
T 2egp_A 11 EEVTCPICLELLTEPLSL--D--CG-HSLCRACITVSNKEAVTSMGGKSSCPVCGISY 63 (79)
T ss_dssp CCCEETTTTEECSSCCCC--S--SS-CCCCHHHHSCCCCCCSSSCCCCCCCSSSCCCC
T ss_pred cCCCCcCCCcccCCeeEC--C--CC-CHHHHHHHHHHHHhcccCCCCCCcCCCCCCcC
Confidence 35668 998764332221 2 55 5688889762 221 13478999998654
No 95
>2zdi_C Prefoldin subunit alpha; chaperone, cytoplasm; 3.00A {Pyrococcus horikoshii}
Probab=60.99 E-value=11 Score=29.09 Aligned_cols=105 Identities=9% Similarity=0.088 Sum_probs=68.1
Q ss_pred HhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHhhh-CCCC-CC-----ch---------h-----
Q 025899 10 NLESLPNILQKKYALLRDLDKSLQEIQRQNEQR---CEQEIEDLMREIRA-GNIT-PN-----TS---------L----- 65 (246)
Q Consensus 10 ~l~~LP~El~r~l~~IreLD~~~~~~~~~~~~~---~~~~l~~~~k~~~~-gs~~-~~-----~~---------~----- 65 (246)
.+.++|.+++.....++.++...+.+...+.+. ...+ ..+..++.. ..+. .. |. .
T Consensus 3 ~m~~~~~~l~ql~~~~qql~~~~~~l~~~~~~L~~a~~~~-~e~~~~l~~l~~l~~~~~~ilvplg~~~yv~g~i~~~~~ 81 (151)
T 2zdi_C 3 RMAQNNKELEKLAYEYQVLQAQAQILAQNLELLNLAKAEV-QTVRETLENLKKIEEEKPEILVPIGAGSFLKGVIVDKNN 81 (151)
T ss_dssp -CCSSTTHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHHHH-HHHHHHHHHHTTCCCSSCEEEEECSSSCEEEEECSCTTE
T ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhcccCCceEEEEcCCCeEEEEEECCCCE
Confidence 356788899999888888888888777776665 4432 222222211 1111 10 00 0
Q ss_pred ------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 025899 66 ------IRFSDDALDEQKHSIRIADEKVALAVQAYDLVDTHIQQLDQYLKNFDEELRR 117 (246)
Q Consensus 66 ------~~l~~~I~~~~~~~~~l~dEKv~LA~q~~dlVd~hirrLD~dl~kfe~eL~~ 117 (246)
..+ -+...+..|.++-++|+..+....+-++.-+..+...+..++..+..
T Consensus 82 V~v~lG~g~--~vE~~~~eA~~~l~~ri~~l~~~l~~l~~~l~~l~~~i~~~~~~l~~ 137 (151)
T 2zdi_C 82 AIVSVGSGY--AVERSIDEAISFLEKRLKEYDEAIKKTQGALAELEKRIGEVARKAQE 137 (151)
T ss_dssp EEEEEETTE--EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHH
T ss_pred EEEEeCCCe--EEEecHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 001 12244567899999999999999999999888888888888877654
No 96
>2k1p_A Zinc finger RAN-binding domain-containing protein 2; ZNF265, RNA binding, ranbp2, RBZ, ZIS, alternative splicing, metal-binding, mRNA processing; NMR {Homo sapiens} PDB: 3g9y_A
Probab=60.13 E-value=2.9 Score=24.14 Aligned_cols=13 Identities=23% Similarity=0.994 Sum_probs=10.2
Q ss_pred CCceeCcCCcccc
Q 025899 228 KGKWYCPDCAALK 240 (246)
Q Consensus 228 ~~~w~C~~C~~~~ 240 (246)
.|+|+|+.|-...
T Consensus 4 ~gDW~C~~C~~~N 16 (33)
T 2k1p_A 4 ANDWQCKTCSNVN 16 (33)
T ss_dssp SSSCBCSSSCCBC
T ss_pred CCCcccCCCCCcc
Confidence 5899999996543
No 97
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=58.91 E-value=3 Score=27.11 Aligned_cols=48 Identities=17% Similarity=0.331 Sum_probs=28.7
Q ss_pred CCCcee-eeCCCCCCCceecCCCCCCCcceecccCCCCccCCCceeCcCCccccc
Q 025899 188 NEPTYC-VCNQVSYGEMVACDNPNCKIEWFHFGCVGLKEQPKGKWYCPDCAALKN 241 (246)
Q Consensus 188 ~~~~~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cv~l~~~~~~~w~C~~C~~~~~ 241 (246)
.+...| +|.......++ -. |. ..||..|+.--.. .+...||.|+..-.
T Consensus 13 ~~~~~C~IC~~~~~~p~~--~~--Cg-H~fC~~Ci~~~~~-~~~~~CP~Cr~~~~ 61 (66)
T 2ecy_A 13 EDKYKCEKCHLVLCSPKQ--TE--CG-HRFCESCMAALLS-SSSPKCTACQESIV 61 (66)
T ss_dssp CCCEECTTTCCEESSCCC--CS--SS-CCCCHHHHHHHHT-TSSCCCTTTCCCCC
T ss_pred CcCCCCCCCChHhcCeeE--CC--CC-CHHHHHHHHHHHH-hCcCCCCCCCcCCC
Confidence 445678 99876433222 13 55 5688999762111 34567999987644
No 98
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=58.05 E-value=3.1 Score=25.78 Aligned_cols=44 Identities=18% Similarity=0.403 Sum_probs=26.1
Q ss_pred cee-eeCCCCC--CCceecCCCCCCCcceecccCCCCccCCCceeCcCCccc
Q 025899 191 TYC-VCNQVSY--GEMVACDNPNCKIEWFHFGCVGLKEQPKGKWYCPDCAAL 239 (246)
Q Consensus 191 ~~C-~C~~~~~--g~mi~Cd~~~C~~~wfH~~Cv~l~~~~~~~w~C~~C~~~ 239 (246)
..| ||..... +..+..-. |. ..||..|+.--... ...||.|+..
T Consensus 6 ~~C~IC~~~~~~~~~~~~~~~--Cg-H~fc~~Ci~~~~~~--~~~CP~Cr~~ 52 (55)
T 2ecm_A 6 SGCPICLEDIHTSRVVAHVLP--CG-HLLHRTCYEEMLKE--GYRCPLCSGP 52 (55)
T ss_dssp CSCTTTCCCCCTTTSCEEECT--TS-CEEETTHHHHHHHH--TCCCTTSCCS
T ss_pred CcCcccChhhcCCCcCeEecC--CC-CcccHHHHHHHHHc--CCcCCCCCCc
Confidence 346 8876532 23444445 65 68999998511110 1679999764
No 99
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=56.30 E-value=11 Score=23.64 Aligned_cols=42 Identities=21% Similarity=0.452 Sum_probs=26.3
Q ss_pred CCCcee-eeCCCCCC-CceecCCCCCCCcceecccCCCCccCCCceeCcCCcccc
Q 025899 188 NEPTYC-VCNQVSYG-EMVACDNPNCKIEWFHFGCVGLKEQPKGKWYCPDCAALK 240 (246)
Q Consensus 188 ~~~~~C-~C~~~~~g-~mi~Cd~~~C~~~wfH~~Cv~l~~~~~~~w~C~~C~~~~ 240 (246)
.+...| +|...... .++- |. .-|+..|+.- ....||.|+..-
T Consensus 4 ~~~~~C~IC~~~~~~p~~l~-----Cg-H~fC~~Ci~~-----~~~~CP~Cr~~~ 47 (56)
T 1bor_A 4 FQFLRCQQCQAEAKCPKLLP-----CL-HTLCSGCLEA-----SGMQCPICQAPW 47 (56)
T ss_dssp CCCSSCSSSCSSCBCCSCST-----TS-CCSBTTTCSS-----SSSSCSSCCSSS
T ss_pred ccCCCceEeCCccCCeEEcC-----CC-CcccHHHHcc-----CCCCCCcCCcEe
Confidence 345667 99876433 2333 44 4588888754 346799998654
No 100
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=55.94 E-value=4.9 Score=27.53 Aligned_cols=25 Identities=32% Similarity=0.687 Sum_probs=18.1
Q ss_pred CCCcceecccCC--CCccCCCceeCcCCcccc
Q 025899 211 CKIEWFHFGCVG--LKEQPKGKWYCPDCAALK 240 (246)
Q Consensus 211 C~~~wfH~~Cv~--l~~~~~~~w~C~~C~~~~ 240 (246)
|. .-||..|+. +... -.||.|+..-
T Consensus 48 C~-H~FH~~Ci~~Wl~~~----~~CP~CR~~~ 74 (81)
T 2ecl_A 48 CN-HSFHNCCMSLWVKQN----NRCPLCQQDW 74 (81)
T ss_dssp TS-CEEEHHHHHHHTTTC----CBCTTTCCBC
T ss_pred CC-CccChHHHHHHHHhC----CCCCCcCCCc
Confidence 55 679999986 3332 3899998764
No 101
>2eli_A Protein kinase C alpha type; PKC-alpha, PKC-A, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=55.76 E-value=15 Score=25.61 Aligned_cols=33 Identities=36% Similarity=0.819 Sum_probs=26.2
Q ss_pred CCcee-eeCCCCCC---CceecCCCCCCCcceecccCCCC
Q 025899 189 EPTYC-VCNQVSYG---EMVACDNPNCKIEWFHFGCVGLK 224 (246)
Q Consensus 189 ~~~~C-~C~~~~~g---~mi~Cd~~~C~~~wfH~~Cv~l~ 224 (246)
.+++| +|+..-+| +-+.|.. |. --+|-.|+...
T Consensus 27 ~pt~C~~C~~~l~Gl~kqG~~C~~--C~-~~~Hk~C~~~v 63 (85)
T 2eli_A 27 SPTFCDHCGSLLYGLIHQGMKCDT--CD-MNVHKQCVINV 63 (85)
T ss_dssp SCCBCSSSCCBCCCSSSCEEECSS--SC-CEEETTTTTTS
T ss_pred CCcCCcccCccccccccCCCcCCC--cC-CccCHhHHhhc
Confidence 47899 99988776 5678998 77 56999998753
No 102
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=54.94 E-value=9.5 Score=28.09 Aligned_cols=27 Identities=19% Similarity=0.276 Sum_probs=23.3
Q ss_pred eecCCCCCCCcceecccCC--CCccCCCceeC
Q 025899 204 VACDNPNCKIEWFHFGCVG--LKEQPKGKWYC 233 (246)
Q Consensus 204 i~Cd~~~C~~~wfH~~Cv~--l~~~~~~~w~C 233 (246)
+.|.. || .-||..|+. |...+.+.|+|
T Consensus 70 ~~C~~--Cp-~sfC~~c~~g~l~~~~~~~~~c 98 (107)
T 4gne_A 70 SFCEF--CP-HSFCKDHEKGALVPSALEGRLC 98 (107)
T ss_dssp EECSS--SS-CEECTTTCTTSCEECTTTTCEE
T ss_pred cCcCC--CC-cchhhhccCCcceecCCCCcee
Confidence 88999 99 889999988 66677888998
No 103
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=54.85 E-value=3.3 Score=31.09 Aligned_cols=24 Identities=38% Similarity=0.790 Sum_probs=0.0
Q ss_pred CCCcceecccCC--CCccCCCceeCcCCccc
Q 025899 211 CKIEWFHFGCVG--LKEQPKGKWYCPDCAAL 239 (246)
Q Consensus 211 C~~~wfH~~Cv~--l~~~~~~~w~C~~C~~~ 239 (246)
|. ..||..|+. |.. .-.||.|+..
T Consensus 84 C~-H~FH~~CI~~Wl~~----~~~CP~Cr~~ 109 (117)
T 4a0k_B 84 CN-HAFHFHCISRWLKT----RQVCPLDNRE 109 (117)
T ss_dssp -------------------------------
T ss_pred cC-ceEcHHHHHHHHHc----CCcCCCCCCe
Confidence 65 679999985 222 3469999876
No 104
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=54.82 E-value=48 Score=22.60 Aligned_cols=44 Identities=14% Similarity=0.225 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 025899 74 DEQKHSIRIADEKVALAVQAYDLVDTHIQQLDQYLKNFDEELRR 117 (246)
Q Consensus 74 ~~~~~~~~l~dEKv~LA~q~~dlVd~hirrLD~dl~kfe~eL~~ 117 (246)
..++.++...+|.+..=......+++-+...|..+..|..+|..
T Consensus 22 ~eLq~~L~~K~eELr~kd~~I~eLEk~L~ekd~eI~~LqseLDK 65 (72)
T 3nmd_A 22 RDLQYALQEKIEELRQRDALIDELELELDQKDELIQMLQNELDK 65 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556666777777777777777788888888888888877753
No 105
>2wuj_A Septum site-determining protein diviva; bacterial cell division, septation, cell cycle, sporulation; 1.40A {Bacillus subtilis} PDB: 2wuk_A
Probab=53.91 E-value=15 Score=23.70 Aligned_cols=28 Identities=18% Similarity=0.280 Sum_probs=15.4
Q ss_pred HHHHHHHhhcccHHHHHHHHHHHHHHHHHHH
Q 025899 4 LDEFQANLESLPNILQKKYALLRDLDKSLQE 34 (246)
Q Consensus 4 Le~fle~l~~LP~El~r~l~~IreLD~~~~~ 34 (246)
+++||+.|. .++.....++.+|..++..
T Consensus 25 VD~FLd~v~---~~~~~l~~e~~~L~~~~~~ 52 (57)
T 2wuj_A 25 VNEFLAQVR---KDYEIVLRKKTELEAKVNE 52 (57)
T ss_dssp HHHHHHHHH---HHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHH---HHHHHHHHHHHHHHHHHHH
Confidence 456666655 4555555555555555443
No 106
>1wig_A KIAA1808 protein; LIM domain, zinc finger, metal-binding protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=53.39 E-value=11 Score=25.15 Aligned_cols=44 Identities=16% Similarity=0.470 Sum_probs=28.1
Q ss_pred ee-eeCCCCCCCceecCCCCCCCcceecccCC-------CC-cc----CCCceeCcCCcccc
Q 025899 192 YC-VCNQVSYGEMVACDNPNCKIEWFHFGCVG-------LK-EQ----PKGKWYCPDCAALK 240 (246)
Q Consensus 192 ~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cv~-------l~-~~----~~~~w~C~~C~~~~ 240 (246)
.| .|+++-.+.+|.-.+ ..||..|.. |. .. ..+.-||..|....
T Consensus 7 ~C~~C~~~I~~~~v~a~~-----~~wH~~CF~C~~C~~~L~~~~~f~~~~~~~yC~~C~~~~ 63 (73)
T 1wig_A 7 GCDSCEKYITGRVLEAGE-----KHYHPSCALCVRCGQMFAEGEEMYLQGSSIWHPACRQAA 63 (73)
T ss_dssp SCSSSCCCCSSCCBCCSS-----CCBCTTTSCCSSSCCCCCSSCCCEEETTEEECTTHHHHT
T ss_pred CcccCCCEecCeeEEeCC-----CCCCCCcCEeCCCCCCCCCCCeeEeeCCEEEChHHChHh
Confidence 56 888887776665444 346877644 33 11 25789999997543
No 107
>1gs9_A Apolipoprotein E, APOE4; lipid transport, heparin-binding, plasma, lipid binding protein; 1.7A {Homo sapiens} SCOP: a.24.1.1 PDB: 1or3_A 1or2_A 1le4_A 1bz4_A 1lpe_A 1le2_A
Probab=52.21 E-value=83 Score=24.64 Aligned_cols=41 Identities=10% Similarity=0.201 Sum_probs=23.8
Q ss_pred HHHHHHHhhcccHHHHHHH--HHH-HHHHHHHHHHHHHHHHHHH
Q 025899 4 LDEFQANLESLPNILQKKY--ALL-RDLDKSLQEIQRQNEQRCE 44 (246)
Q Consensus 4 Le~fle~l~~LP~El~r~l--~~I-reLD~~~~~~~~~~~~~~~ 44 (246)
+-+|+.-+.+-=.+....| +++ ++|+..+.+.+..+....+
T Consensus 33 ~w~Y~~q~~~~a~~~v~ql~~sel~qel~~~l~~~ld~l~~~~~ 76 (165)
T 1gs9_A 33 FWDYLRWVQTLSEQVQEELLSSQVTQELRALMDETMKELKAYKS 76 (165)
T ss_dssp HHHHHHHHHHCCHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566666665544444443 355 7778877776666554433
No 108
>2ke4_A CDC42-interacting protein 4; CIP4, TC10, coiled-coil, alternative splicing, cell membrane, coiled coil, cytoplasm, cytoskeleton, endocytosis; NMR {Homo sapiens}
Probab=52.05 E-value=42 Score=24.14 Aligned_cols=18 Identities=17% Similarity=0.329 Sum_probs=11.5
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 025899 98 DTHIQQLDQYLKNFDEEL 115 (246)
Q Consensus 98 d~hirrLD~dl~kfe~eL 115 (246)
..+|..|..++.+|+.-|
T Consensus 68 ~~kid~L~~el~K~q~~L 85 (98)
T 2ke4_A 68 LSNIERLKLEVQKYEAWL 85 (98)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 466667777776666544
No 109
>1m1j_A Fibrinogen alpha subunit; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: h.1.8.1 PDB: 1ei3_A
Probab=49.51 E-value=1.6e+02 Score=27.13 Aligned_cols=47 Identities=6% Similarity=-0.060 Sum_probs=27.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHH
Q 025899 66 IRFSDDALDEQKHSIRIADEKVALAVQAYDLVD---THIQQLDQYLKNFD 112 (246)
Q Consensus 66 ~~l~~~I~~~~~~~~~l~dEKv~LA~q~~dlVd---~hirrLD~dl~kfe 112 (246)
..+..+|+..+.-+++--++.|+....+...|+ ..|+||+.++..--
T Consensus 110 ~e~S~eLe~ri~yIK~kVd~qi~~IrvLq~~l~~q~skIQRLE~dI~~q~ 159 (491)
T 1m1j_A 110 GHVSTELRRRIVTLKQRVATQVNRIKALQNSIQEQVVEMKRLEVDIDIKI 159 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344455555555555555555554444444444 57999998885433
No 110
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=49.46 E-value=3.7 Score=29.55 Aligned_cols=45 Identities=24% Similarity=0.436 Sum_probs=26.8
Q ss_pred cee-eeCCCCCCCceecCCCCCCCcceecccCCCC-ccCCCceeCcCCcccc
Q 025899 191 TYC-VCNQVSYGEMVACDNPNCKIEWFHFGCVGLK-EQPKGKWYCPDCAALK 240 (246)
Q Consensus 191 ~~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cv~l~-~~~~~~w~C~~C~~~~ 240 (246)
..| +|.......++. . |. ..||..|+.-- ....+...||.|+..-
T Consensus 22 ~~C~IC~~~~~~p~~~--~--Cg-H~fC~~Ci~~~~~~~~~~~~CP~Cr~~~ 68 (112)
T 1jm7_A 22 LECPICLELIKEPVST--K--CD-HIFCKFCMLKLLNQKKGPSQCPLCKNDI 68 (112)
T ss_dssp TSCSSSCCCCSSCCBC--T--TS-CCCCSHHHHHHHHSSSSSCCCTTTSCCC
T ss_pred CCCcccChhhcCeEEC--C--CC-CHHHHHHHHHHHHhCCCCCCCcCCCCcC
Confidence 457 897654332221 3 55 67888997621 1223557899998653
No 111
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=49.22 E-value=1.1e+02 Score=25.32 Aligned_cols=32 Identities=9% Similarity=0.124 Sum_probs=19.5
Q ss_pred HHHhhcccHHHHHHHHHHHHHHHHHHHHHHHH
Q 025899 8 QANLESLPNILQKKYALLRDLDKSLQEIQRQN 39 (246)
Q Consensus 8 le~l~~LP~El~r~l~~IreLD~~~~~~~~~~ 39 (246)
-..+.+||.+|...-..+..+..++..+..++
T Consensus 24 ~~~~~~lp~el~~le~~~~~l~~~~~~~~~~l 55 (256)
T 3na7_A 24 EPLIREKRKDLDKALNDKEAKNKAILNLEEEK 55 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455677777777666666666655444433
No 112
>3mq9_A Bone marrow stromal antigen 2 fused to maltose-BI periplasmic protein; HIV, antiviral protein; 2.80A {Escherichia coli}
Probab=47.76 E-value=1.5e+02 Score=26.43 Aligned_cols=33 Identities=18% Similarity=0.291 Sum_probs=16.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 025899 84 DEKVALAVQAYDLVDTHIQQLDQYLKNFDEELR 116 (246)
Q Consensus 84 dEKv~LA~q~~dlVd~hirrLD~dl~kfe~eL~ 116 (246)
+.|+.-++.-..-++..|..|++.|+..+++++
T Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (471)
T 3mq9_A 435 DAEKAQGQKKVEELEGEITTLNHKLQDASAEVE 467 (471)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334443443344445555555566655555544
No 113
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=47.11 E-value=42 Score=22.85 Aligned_cols=36 Identities=31% Similarity=0.370 Sum_probs=25.2
Q ss_pred HhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 025899 10 NLESLPNILQKKYALLRDLDKSLQEIQRQNEQRCEQ 45 (246)
Q Consensus 10 ~l~~LP~El~r~l~~IreLD~~~~~~~~~~~~~~~~ 45 (246)
+|-.|-..|++...+||..|..+.++-.++.++...
T Consensus 20 ti~eLq~~L~~K~eELr~kd~~I~eLEk~L~ekd~e 55 (72)
T 3nmd_A 20 SLRDLQYALQEKIEELRQRDALIDELELELDQKDEL 55 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455556677777788888888888777666655443
No 114
>2co8_A NEDD9 interacting protein with calponin homology and LIM domains; zinc finger protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=45.77 E-value=41 Score=22.67 Aligned_cols=45 Identities=24% Similarity=0.592 Sum_probs=28.8
Q ss_pred Ccee-eeCCCCC-CCceecCCCCCCCcceecccCC-------CCc------cCCCceeCcCCccc
Q 025899 190 PTYC-VCNQVSY-GEMVACDNPNCKIEWFHFGCVG-------LKE------QPKGKWYCPDCAAL 239 (246)
Q Consensus 190 ~~~C-~C~~~~~-g~mi~Cd~~~C~~~wfH~~Cv~-------l~~------~~~~~w~C~~C~~~ 239 (246)
...| .|+++-+ +++|...+ .-||..|.. |.. ...+..||..|...
T Consensus 15 ~~~C~~C~~~I~~~e~v~a~~-----~~wH~~CF~C~~C~~~L~~~~~~~~~~~g~~yC~~~y~~ 74 (82)
T 2co8_A 15 GDLCALCGEHLYVLERLCVNG-----HFFHRSCFRCHTCEATLWPGGYEQHPGDGHFYCLQHLPQ 74 (82)
T ss_dssp SCBCSSSCCBCCTTTBCCBTT-----BCCBTTTCBCSSSCCBCCTTSEECCTTTCCCEETTTCCC
T ss_pred CCCCcccCCCcccceEEEECC-----CeeCCCcCEEcCCCCCcCCCceeEeCcCCEEEChHHHHh
Confidence 4567 9998764 66766554 456877744 222 12578899988754
No 115
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=45.09 E-value=6.6 Score=33.00 Aligned_cols=44 Identities=27% Similarity=0.717 Sum_probs=29.7
Q ss_pred Ccee-eeCCCC-CCCceecCCCCCCCcceecccCCCCccCCCceeCcCCcc
Q 025899 190 PTYC-VCNQVS-YGEMVACDNPNCKIEWFHFGCVGLKEQPKGKWYCPDCAA 238 (246)
Q Consensus 190 ~~~C-~C~~~~-~g~mi~Cd~~~C~~~wfH~~Cv~l~~~~~~~w~C~~C~~ 238 (246)
...| +|...- .| +.|.+ |. .-||..|+.---...+.--||.|..
T Consensus 180 i~~C~iC~~iv~~g--~~C~~--C~-~~~H~~C~~~~~~~~~~~~CP~C~~ 225 (238)
T 3nw0_A 180 VKICNICHSLLIQG--QSCET--CG-IRMHLPCVAKYFQSNAEPRCPHCND 225 (238)
T ss_dssp CCBCTTTCSBCSSC--EECSS--SC-CEECHHHHHHHTTTCSSCBCTTTCC
T ss_pred CCcCcchhhHHhCC--cccCc--cC-hHHHHHHHHHHHHhCCCCCCCCCCC
Confidence 4457 998763 34 78988 77 6799999863222234567999964
No 116
>2lh0_A Histone chaperone RTT106; chromosomal protein, nucleus, phosphoprotein, transcription, transcription regulation, transposition; NMR {Saccharomyces cerevisiae}
Probab=44.94 E-value=15 Score=24.94 Aligned_cols=32 Identities=25% Similarity=0.236 Sum_probs=27.0
Q ss_pred hhcccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 025899 11 LESLPNILQKKYALLRDLDKSLQEIQRQNEQR 42 (246)
Q Consensus 11 l~~LP~El~r~l~~IreLD~~~~~~~~~~~~~ 42 (246)
|++||.+|+..+.-|=.-|-....+..++.+.
T Consensus 9 L~~LP~~Lq~kV~aIV~~~PsSl~VF~~Ly~y 40 (70)
T 2lh0_A 9 LDELPESLSRKIGTVVRVLPSSLEIFEELYKY 40 (70)
T ss_dssp GGGSCHHHHHHHHHHHTTCTTHHHHHHHHHHH
T ss_pred HHhCCHHHHHHHHHHHHhCccHHHHHHHHHHH
Confidence 78999999999999999998888877666543
No 117
>4b2u_A S67; toxin, ICK; NMR {Sicarius dolichocephalus}
Probab=44.38 E-value=4.7 Score=22.93 Aligned_cols=14 Identities=29% Similarity=0.992 Sum_probs=10.9
Q ss_pred CCceeCcCCccccc
Q 025899 228 KGKWYCPDCAALKN 241 (246)
Q Consensus 228 ~~~w~C~~C~~~~~ 241 (246)
.|+|-|..|..+.+
T Consensus 16 egdwcchkcvpegk 29 (36)
T 4b2u_A 16 EGDWCCHKCVPEGK 29 (36)
T ss_dssp GCCSSSSEEEEETT
T ss_pred ccCeeeecccccCc
Confidence 58899999887654
No 118
>2jwo_A RAG-2, V(D)J recombination-activating protein 2; phosphoinositide signaling, PHD domain, DNA recombination, DNA-binding, endonuclease, hydrolase; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 2v83_A* 2v85_A* 2v86_A* 2v87_A* 2v88_A* 2v89_A*
Probab=44.05 E-value=13 Score=25.64 Aligned_cols=31 Identities=32% Similarity=0.889 Sum_probs=23.5
Q ss_pred ceecCCCCCCCcceecccCCCCcc-------CCCceeCcC
Q 025899 203 MVACDNPNCKIEWFHFGCVGLKEQ-------PKGKWYCPD 235 (246)
Q Consensus 203 mi~Cd~~~C~~~wfH~~Cv~l~~~-------~~~~w~C~~ 235 (246)
||.|...+ ..|.|-.|..|.+. ...+|||.+
T Consensus 38 mi~cs~g~--ghwvhaqcm~l~e~~l~~lsq~n~ky~c~~ 75 (82)
T 2jwo_A 38 MIYCSHGD--GHWVHAQCMDLEERTLIHLSEGSNKYYCNE 75 (82)
T ss_dssp CEECCSSS--CCEECSGGGTCCHHHHHHHTTSSCCCCCST
T ss_pred hhhcCCCc--chHHHHHHhhHHHHHHHHHhcCCcEEEEcC
Confidence 89997654 38999999988762 256788865
No 119
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=43.49 E-value=9.2 Score=25.17 Aligned_cols=47 Identities=17% Similarity=0.381 Sum_probs=27.1
Q ss_pred CCcee-eeCCCCCCCceecCCCCCCCcceecccCCCCccCCCceeCcCCccccc
Q 025899 189 EPTYC-VCNQVSYGEMVACDNPNCKIEWFHFGCVGLKEQPKGKWYCPDCAALKN 241 (246)
Q Consensus 189 ~~~~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cv~l~~~~~~~w~C~~C~~~~~ 241 (246)
+...| +|....... +.... |. .-||..|+.---. ....||.|+..-.
T Consensus 14 ~~~~C~IC~~~~~~p-~~~~~--Cg-H~fC~~Ci~~~~~--~~~~CP~Cr~~~~ 61 (72)
T 2djb_A 14 PYILCSICKGYLIDA-TTITE--CL-HTFCKSCIVRHFY--YSNRCPKCNIVVH 61 (72)
T ss_dssp GGGSCTTTSSCCSSC-EECSS--SC-CEECHHHHHHHHH--HCSSCTTTCCCCC
T ss_pred CCCCCCCCChHHHCc-CEECC--CC-CHHHHHHHHHHHH--cCCcCCCcCcccC
Confidence 35668 997664332 22233 55 5688889741111 1357999987543
No 120
>1x62_A C-terminal LIM domain protein 1; PDZ and LIM domain protein 1, LIM domain protein CLP-36, contractIle protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=42.98 E-value=29 Score=23.17 Aligned_cols=46 Identities=24% Similarity=0.385 Sum_probs=29.9
Q ss_pred Ccee-eeCCCCCCCceecCCCCCCCcceecccCC-------CCc----cCCCceeCcCCcccc
Q 025899 190 PTYC-VCNQVSYGEMVACDNPNCKIEWFHFGCVG-------LKE----QPKGKWYCPDCAALK 240 (246)
Q Consensus 190 ~~~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cv~-------l~~----~~~~~w~C~~C~~~~ 240 (246)
...| .|+++-++.+|.-.+ .-||..|.. |.. ...+..||..|....
T Consensus 15 ~~~C~~C~~~I~~~~~~a~~-----~~~H~~CF~C~~C~~~L~~~~~~~~~g~~yC~~cy~~~ 72 (79)
T 1x62_A 15 LPMCDKCGTGIVGVFVKLRD-----RHRHPECYVCTDCGTNLKQKGHFFVEDQIYCEKHARER 72 (79)
T ss_dssp CCCCSSSCCCCCSSCEECSS-----CEECTTTTSCSSSCCCHHHHCCEESSSCEECHHHHHHH
T ss_pred CCccccCCCCccCcEEEECc-----ceeCcCcCeeCCCCCCCCCCCeEeECCEEECHHHHHHH
Confidence 4568 999887777666555 446887754 211 125788998886543
No 121
>4fla_A Regulation of nuclear PRE-mRNA domain-containing 1B; structural genomics consortium, SGC, transcription; 2.20A {Homo sapiens}
Probab=41.24 E-value=1.2e+02 Score=23.42 Aligned_cols=43 Identities=5% Similarity=0.016 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 025899 71 DALDEQKHSIRIADEKVALAVQAYDLVDTHIQQLDQYLKNFDE 113 (246)
Q Consensus 71 ~I~~~~~~~~~l~dEKv~LA~q~~dlVd~hirrLD~dl~kfe~ 113 (246)
++...+..+.....+-+.-|...++-..+...|+-+.-.++..
T Consensus 100 ~L~~~L~~~~~~~~~~l~e~e~~leeyK~Kl~rv~~vkkeL~~ 142 (152)
T 4fla_A 100 QLARMLVEYTQNQKDVLSEKEKKLEEYKQKLARVTQVRKELKS 142 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555556666666666666666665555555555544444443
No 122
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=41.09 E-value=5.7 Score=27.50 Aligned_cols=47 Identities=17% Similarity=0.489 Sum_probs=27.4
Q ss_pred CCcee-eeCCCCCCCceecCCCCCCCcceecccCCCCccCCCceeCcCCccc
Q 025899 189 EPTYC-VCNQVSYGEMVACDNPNCKIEWFHFGCVGLKEQPKGKWYCPDCAAL 239 (246)
Q Consensus 189 ~~~~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cv~l~~~~~~~w~C~~C~~~ 239 (246)
+...| +|.......++ ... |. .-|+..|+.-.-...+...||.|+..
T Consensus 12 ~~~~C~IC~~~~~~p~~-~~~--Cg-H~fC~~Ci~~~~~~~~~~~CP~Cr~~ 59 (92)
T 3ztg_A 12 DELLCLICKDIMTDAVV-IPC--CG-NSYCDECIRTALLESDEHTCPTCHQN 59 (92)
T ss_dssp TTTEETTTTEECSSCEE-CTT--TC-CEECHHHHHHHHHHCTTCCCTTTCCS
T ss_pred cCCCCCCCChhhcCceE-CCC--CC-CHHHHHHHHHHHHhcCCCcCcCCCCc
Confidence 45678 99876443322 222 44 56788887521112245789999875
No 123
>1nfn_A Apolipoprotein E3; lipid transport, heparin-binding, plasma protein, HDL, VLDL; 1.80A {Homo sapiens} SCOP: a.24.1.1 PDB: 1h7i_A 1ea8_A 1b68_A 1nfo_A 2kc3_A 1ya9_A
Probab=40.86 E-value=1.4e+02 Score=23.87 Aligned_cols=40 Identities=10% Similarity=0.201 Sum_probs=30.5
Q ss_pred cHHHHHHHhhcccHHHHHHH--HHH-HHHHHHHHHHHHHHHHH
Q 025899 3 FLDEFQANLESLPNILQKKY--ALL-RDLDKSLQEIQRQNEQR 42 (246)
Q Consensus 3 yLe~fle~l~~LP~El~r~l--~~I-reLD~~~~~~~~~~~~~ 42 (246)
.|.+|++.+.+-=.++...| +.| ++++..+.+.+..+...
T Consensus 32 ~~~~y~~~l~~~a~~~~eqL~~s~l~~el~~l~~e~~~~l~~~ 74 (191)
T 1nfn_A 32 RFWDYLRWVQTLSEQVQEELLSSQVTQELRALMDETMKELKAY 74 (191)
T ss_dssp HHHHHHHHHHHCCHHHHHHHTSSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHH
Confidence 46678888888788888888 777 88888888877776644
No 124
>2l5g_A GPS2 protein, G protein pathway suppressor 2; GPS2, SMRT, TBL1, CO-repressor, transcription regulator; NMR {Homo sapiens}
Probab=40.75 E-value=52 Score=19.39 Aligned_cols=25 Identities=16% Similarity=0.206 Sum_probs=18.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH
Q 025899 66 IRFSDDALDEQKHSIRIADEKVALA 90 (246)
Q Consensus 66 ~~l~~~I~~~~~~~~~l~dEKv~LA 90 (246)
+....+|...-.+...|.+||-+|-
T Consensus 11 eEtkeQi~~l~~kl~~LkeEKHQLF 35 (38)
T 2l5g_A 11 EETKEQILKLEEKLLALQEEKHQLF 35 (38)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445677788888889999998764
No 125
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=40.27 E-value=18 Score=24.65 Aligned_cols=44 Identities=23% Similarity=0.726 Sum_probs=28.4
Q ss_pred Ccee-eeCCCCCCCceecCCCCCCCcceecccCC--CCccCCCceeCcCCccc
Q 025899 190 PTYC-VCNQVSYGEMVACDNPNCKIEWFHFGCVG--LKEQPKGKWYCPDCAAL 239 (246)
Q Consensus 190 ~~~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cv~--l~~~~~~~w~C~~C~~~ 239 (246)
...| +|...-. .-+.|.. |. .-||..|+. +... ..=.||.|+..
T Consensus 15 i~~C~IC~~~i~-~g~~C~~--C~-h~fH~~Ci~kWl~~~--~~~~CP~Cr~~ 61 (74)
T 2ct0_A 15 VKICNICHSLLI-QGQSCET--CG-IRMHLPCVAKYFQSN--AEPRCPHCNDY 61 (74)
T ss_dssp SCBCSSSCCBCS-SSEECSS--SC-CEECHHHHHHHSTTC--SSCCCTTTCSC
T ss_pred CCcCcchhhHcc-cCCccCC--CC-chhhHHHHHHHHHhc--CCCCCCCCcCc
Confidence 4457 9987643 1246665 76 679999987 4332 22469999754
No 126
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=39.89 E-value=11 Score=27.32 Aligned_cols=45 Identities=18% Similarity=0.414 Sum_probs=27.9
Q ss_pred Ccee-eeCCCCCCCceecCCCCCCCcceecccCCCCccCCCceeCcCCcccc
Q 025899 190 PTYC-VCNQVSYGEMVACDNPNCKIEWFHFGCVGLKEQPKGKWYCPDCAALK 240 (246)
Q Consensus 190 ~~~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cv~l~~~~~~~w~C~~C~~~~ 240 (246)
...| +|........+. . |. .-|+..|+.--. ..+...||.|+..-
T Consensus 15 ~~~C~iC~~~~~~p~~~--~--Cg-H~fC~~Ci~~~~-~~~~~~CP~Cr~~~ 60 (115)
T 3l11_A 15 ECQCGICMEILVEPVTL--P--CN-HTLCKPCFQSTV-EKASLCCPFCRRRV 60 (115)
T ss_dssp HHBCTTTCSBCSSCEEC--T--TS-CEECHHHHCCCC-CTTTSBCTTTCCBC
T ss_pred CCCCccCCcccCceeEc--C--CC-CHHhHHHHHHHH-hHCcCCCCCCCccc
Confidence 4568 998765433222 3 55 568888875222 12458899998753
No 127
>2d8v_A Zinc finger FYVE domain-containing protein 19; zfyve19, ZF- B_BOX, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.43.1.1
Probab=39.64 E-value=15 Score=24.70 Aligned_cols=30 Identities=33% Similarity=0.977 Sum_probs=18.6
Q ss_pred CceeeeCCCCCCCceecCCCCCCCcceecccCCCCccCCCceeCcCCcccc
Q 025899 190 PTYCVCNQVSYGEMVACDNPNCKIEWFHFGCVGLKEQPKGKWYCPDCAALK 240 (246)
Q Consensus 190 ~~~C~C~~~~~g~mi~Cd~~~C~~~wfH~~Cv~l~~~~~~~w~C~~C~~~~ 240 (246)
+..|||+... -+.|-+ |- ++.||..|.++.
T Consensus 9 pWC~ICneDA---tlrC~g--Cd----------------gDLYC~rC~rE~ 38 (67)
T 2d8v_A 9 PWCCICNEDA---TLRCAG--CD----------------GDLYCARCFREG 38 (67)
T ss_dssp SSCTTTCSCC---CEEETT--TT----------------SEEECSSHHHHH
T ss_pred CeeEEeCCCC---eEEecC--CC----------------CceehHHHHHHH
Confidence 4445998762 367777 43 457777776543
No 128
>2enz_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=38.96 E-value=27 Score=22.75 Aligned_cols=34 Identities=29% Similarity=0.769 Sum_probs=26.3
Q ss_pred CCCcee-eeCCCCCC---CceecCCCCCCCcceecccCCCC
Q 025899 188 NEPTYC-VCNQVSYG---EMVACDNPNCKIEWFHFGCVGLK 224 (246)
Q Consensus 188 ~~~~~C-~C~~~~~g---~mi~Cd~~~C~~~wfH~~Cv~l~ 224 (246)
..+++| +|+..-+| +-+.|.. |. --+|-.|+...
T Consensus 21 ~~pt~C~~C~~~l~Gl~~qg~~C~~--C~-~~~Hk~C~~~v 58 (65)
T 2enz_A 21 KSPTFCEHCGTLLWGLARQGLKCDA--CG-MNVHHRCQTKV 58 (65)
T ss_dssp CSCCBCSSSCCBCCCSSSCSEEESS--SC-CEECTTTTTTS
T ss_pred CCCcCchhcChhheecCCcccccCC--CC-CccCHhHHhhC
Confidence 347899 99988776 5678998 77 56999998743
No 129
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=38.87 E-value=7.9 Score=25.82 Aligned_cols=46 Identities=11% Similarity=0.183 Sum_probs=28.5
Q ss_pred CCcee-eeCCCCCCCceecCCCCCCCcceecccCCCCccCCCceeCcCCcccc
Q 025899 189 EPTYC-VCNQVSYGEMVACDNPNCKIEWFHFGCVGLKEQPKGKWYCPDCAALK 240 (246)
Q Consensus 189 ~~~~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cv~l~~~~~~~w~C~~C~~~~ 240 (246)
+...| +|...-...++. . |. ..|+..|+.---. .+...||.|+..-
T Consensus 7 ~~~~C~IC~~~~~~Pv~~--~--Cg-H~fc~~Ci~~~~~-~~~~~CP~C~~~~ 53 (78)
T 1t1h_A 7 EYFRCPISLELMKDPVIV--S--TG-QTYERSSIQKWLD-AGHKTCPKSQETL 53 (78)
T ss_dssp SSSSCTTTSCCCSSEEEE--T--TT-EEEEHHHHHHHHT-TTCCBCTTTCCBC
T ss_pred ccCCCCCccccccCCEEc--C--CC-CeecHHHHHHHHH-HCcCCCCCCcCCC
Confidence 35678 998764333332 3 65 6788888751111 2467899998653
No 130
>2enn_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=38.59 E-value=19 Score=24.52 Aligned_cols=34 Identities=29% Similarity=0.844 Sum_probs=26.3
Q ss_pred CCCcee-eeCCCCCC---CceecCCCCCCCcceecccCCCC
Q 025899 188 NEPTYC-VCNQVSYG---EMVACDNPNCKIEWFHFGCVGLK 224 (246)
Q Consensus 188 ~~~~~C-~C~~~~~g---~mi~Cd~~~C~~~wfH~~Cv~l~ 224 (246)
..+++| +|+..-+| +-+.|.. |. --+|-.|+...
T Consensus 32 ~~pt~C~~C~~~lwGl~kqG~~C~~--C~-~~~Hk~C~~~v 69 (77)
T 2enn_A 32 PQPTFCSVCHEFVWGLNKQGYQCRQ--CN-AAIHKKCIDKV 69 (77)
T ss_dssp SSCEECSSSCCEECCTTCCEEECSS--SC-CEEESGGGSSC
T ss_pred CCCcCccccChhhccccccccCcCC--CC-CcCCHhHHhhC
Confidence 347899 99988775 4578999 77 56999998743
No 131
>2yuu_A NPKC-delta, protein kinase C delta type; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=37.31 E-value=22 Score=24.48 Aligned_cols=33 Identities=30% Similarity=0.860 Sum_probs=25.9
Q ss_pred CCcee-eeCCCCCC---CceecCCCCCCCcceecccCCCC
Q 025899 189 EPTYC-VCNQVSYG---EMVACDNPNCKIEWFHFGCVGLK 224 (246)
Q Consensus 189 ~~~~C-~C~~~~~g---~mi~Cd~~~C~~~wfH~~Cv~l~ 224 (246)
.+++| +|+..-+| +-+.|.. |. --+|-.|+...
T Consensus 27 ~pt~C~~C~~~lwGl~kqg~~C~~--C~-~~~Hk~C~~~v 63 (83)
T 2yuu_A 27 QPTFCSVCKDFVWGLNKQGYKCRQ--CN-AAIHKKCIDKI 63 (83)
T ss_dssp SCCCCSSSCCCCCSSSCCEEEETT--TC-CEECTTGGGTC
T ss_pred CCcChhhcChhhccccccccccCC--cC-CeeChhhhhhC
Confidence 47899 99988776 5688999 77 56999998743
No 132
>2efl_A Formin-binding protein 1; EFC domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.61A {Homo sapiens} SCOP: a.238.1.4
Probab=37.03 E-value=1.8e+02 Score=24.05 Aligned_cols=94 Identities=12% Similarity=0.108 Sum_probs=49.5
Q ss_pred CCcHHHHHHHhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCC----CCchhhHHHHHHHHHH
Q 025899 1 MSFLDEFQANLESLPNILQKKYALLRDLDKSLQEIQRQNEQRCEQEIEDLMREIRAGNIT----PNTSLIRFSDDALDEQ 76 (246)
Q Consensus 1 m~yLe~fle~l~~LP~El~r~l~~IreLD~~~~~~~~~~~~~~~~~l~~~~k~~~~gs~~----~~~~~~~l~~~I~~~~ 76 (246)
|.|-++|-+.++.|=.-+..-+..+.++-.-+++ +..|+..+.+-|..+.+ +..... ..+..-.+..-+...+
T Consensus 6 ~~f~~~fw~g~~~l~~r~~~g~~~~~el~~f~~e-Ra~iE~eYak~L~kLa~--~~~~~~~~~~~~~~~~t~~~aw~~~~ 82 (305)
T 2efl_A 6 MSWGTELWDQFDNLEKHTQWGIDILEKYIKFVKE-RTEIELSYAKQLRNLSK--KYQPKKNSKEEEEYKYTSCKAFISNL 82 (305)
T ss_dssp CCHHHHTTTCHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH--HTSCC-------CTTSHHHHHHHHHH
T ss_pred CChhhHHhHHHHHHHHHHHHhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH--HhccccccCccccccccHHHHHHHHH
Confidence 5566677765665555566666666666555555 56677777776666665 222111 0111112222333444
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 025899 77 KHSIRIADEKVALAVQAYDLV 97 (246)
Q Consensus 77 ~~~~~l~dEKv~LA~q~~dlV 97 (246)
..+..++.....+|+.+...|
T Consensus 83 ~~~e~~a~~h~~~a~~l~~~v 103 (305)
T 2efl_A 83 NEMNDYAGQHEVISENMASQI 103 (305)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 445566666666666664333
No 133
>3ghg_B Fibrinogen beta chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_B* 1deq_B 2a45_H*
Probab=36.83 E-value=2.5e+02 Score=25.78 Aligned_cols=37 Identities=11% Similarity=0.026 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 025899 79 SIRIADEKVALAVQAYDLVDTHIQQLDQYLKNFDEEL 115 (246)
Q Consensus 79 ~~~l~dEKv~LA~q~~dlVd~hirrLD~dl~kfe~eL 115 (246)
+..-...-|..-+.+++.+...|.+|+..+..++...
T Consensus 157 ~~~~~~~~i~~l~~~~~~~~~~i~~l~~~~~~~~~~c 193 (461)
T 3ghg_B 157 VNSNIPTNLRVLRSILENLRSKIQKLESDVSAQMEYC 193 (461)
T ss_dssp HHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hhccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc
Confidence 3344566778888889999999999999998888653
No 134
>3ghg_C Fibrinogen gamma chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 1deq_C
Probab=36.34 E-value=2.4e+02 Score=25.46 Aligned_cols=39 Identities=15% Similarity=0.269 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 025899 76 QKHSIRIADEKVALAVQAYDLVDTHIQQLDQYLKNFDEE 114 (246)
Q Consensus 76 ~~~~~~l~dEKv~LA~q~~dlVd~hirrLD~dl~kfe~e 114 (246)
+...+.-.+.-|..-+.+++..+..|..|...+..|+..
T Consensus 96 ~~~~~~~~~~~i~~l~~~~~~~~~~i~~L~~~v~~l~~~ 134 (411)
T 3ghg_C 96 YEASILTHDSSIRYLQEIYNSNNQKIVNLKEKVAQLEAQ 134 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345555556677777777777788888888888777753
No 135
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=35.96 E-value=14 Score=23.80 Aligned_cols=46 Identities=26% Similarity=0.605 Sum_probs=28.1
Q ss_pred CCcee-eeCCCC-----CCCceecCCCCCCCcceecccCC--CCccCCCceeCcCCccccc
Q 025899 189 EPTYC-VCNQVS-----YGEMVACDNPNCKIEWFHFGCVG--LKEQPKGKWYCPDCAALKN 241 (246)
Q Consensus 189 ~~~~C-~C~~~~-----~g~mi~Cd~~~C~~~wfH~~Cv~--l~~~~~~~w~C~~C~~~~~ 241 (246)
+...| +|.... .+..+..-. |. ..||..|+. +.. .-.||.|+..-.
T Consensus 9 ~~~~C~IC~~~~~~~~~~~~~~~~~~--Cg-H~fc~~Ci~~~~~~----~~~CP~Cr~~~~ 62 (71)
T 3ng2_A 9 GTVSCPICMDGYSEIVQNGRLIVSTE--CG-HVFCSQCLRDSLKN----ANTCPTCRKKIN 62 (71)
T ss_dssp TCCBCTTTCCBHHHHHTTTCCEEECT--TS-CEEEHHHHHHHHHH----CSBCTTTCCBCC
T ss_pred CCCCCcccChhhhccccccCCeEeCC--CC-ChHhHHHHHHHHHc----CCCCCCCCCccC
Confidence 34567 887652 133334444 55 679999985 222 137999987644
No 136
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=35.95 E-value=13 Score=27.00 Aligned_cols=24 Identities=38% Similarity=0.790 Sum_probs=17.8
Q ss_pred CCCcceecccCC--CCccCCCceeCcCCccc
Q 025899 211 CKIEWFHFGCVG--LKEQPKGKWYCPDCAAL 239 (246)
Q Consensus 211 C~~~wfH~~Cv~--l~~~~~~~w~C~~C~~~ 239 (246)
|. ..||..|+. |.. .-.||.|+..
T Consensus 73 C~-H~FH~~Ci~~Wl~~----~~~CP~Cr~~ 98 (106)
T 3dpl_R 73 CN-HAFHFHCISRWLKT----RQVCPLDNRE 98 (106)
T ss_dssp TS-CEEEHHHHHHHHTT----CSBCSSSCSB
T ss_pred cC-cEECHHHHHHHHHc----CCcCcCCCCc
Confidence 66 679999985 222 3579999876
No 137
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=35.62 E-value=7.4 Score=25.38 Aligned_cols=44 Identities=18% Similarity=0.445 Sum_probs=26.6
Q ss_pred CCcee-eeCCCCCCCceecCCCCCCCcceecccCCCCccCCCceeCcCCcccc
Q 025899 189 EPTYC-VCNQVSYGEMVACDNPNCKIEWFHFGCVGLKEQPKGKWYCPDCAALK 240 (246)
Q Consensus 189 ~~~~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cv~l~~~~~~~w~C~~C~~~~ 240 (246)
+...| +|...... ++ -. |. ..||..|+.--.. ....||.|+..-
T Consensus 14 ~~~~C~IC~~~~~~-~~--~~--Cg-H~fc~~Ci~~~~~--~~~~CP~Cr~~~ 58 (70)
T 2ecn_A 14 DEEECCICMDGRAD-LI--LP--CA-HSFCQKCIDKWSD--RHRNCPICRLQM 58 (70)
T ss_dssp CCCCCSSSCCSCCS-EE--ET--TT-EEECHHHHHHSSC--CCSSCHHHHHCT
T ss_pred CCCCCeeCCcCccC-cc--cC--CC-CcccHHHHHHHHH--CcCcCCCcCCcc
Confidence 34567 99766433 22 23 55 5699999862111 357899997654
No 138
>4dac_A Computationally designed crystal forming protein; alpha-helix, three-helix bundle, coiled-coil protein, DE NOV computational protein design; 2.10A {Synthetic}
Probab=35.25 E-value=54 Score=17.53 Aligned_cols=19 Identities=16% Similarity=0.471 Sum_probs=14.2
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 025899 96 LVDTHIQQLDQYLKNFDEE 114 (246)
Q Consensus 96 lVd~hirrLD~dl~kfe~e 114 (246)
-+|..++||+.+..+++-+
T Consensus 5 kldanvkrlekevgklege 23 (28)
T 4dac_A 5 KLDANVKRLEKEVGKLEGE 23 (28)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred eccccHHHHHHHHhhhhhh
Confidence 4677788888888888754
No 139
>1fxk_C Protein (prefoldin); archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1
Probab=33.95 E-value=1.4e+02 Score=21.94 Aligned_cols=44 Identities=0% Similarity=0.086 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 025899 74 DEQKHSIRIADEKVALAVQAYDLVDTHIQQLDQYLKNFDEELRR 117 (246)
Q Consensus 74 ~~~~~~~~l~dEKv~LA~q~~dlVd~hirrLD~dl~kfe~eL~~ 117 (246)
.....|.++-++|+..+....+-+.+-+..+...+..+...|++
T Consensus 84 ~~~~eA~~~l~~r~~~l~~~~~~l~~~l~~l~~~i~~~~~~l~~ 127 (133)
T 1fxk_C 84 KNFEDAMESIKSQKNELESTLQKMGENLRAITDIMMKLSPQAEE 127 (133)
T ss_dssp EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44567899999999999999999999999999888888877654
No 140
>1faq_A RAF-1; transferase, serine/threonine-protein kinase, proto- oncogene, zinc, ATP-binding, phorbol-ester binding; NMR {Homo sapiens} SCOP: g.49.1.1 PDB: 1far_A
Probab=33.85 E-value=24 Score=21.67 Aligned_cols=33 Identities=21% Similarity=0.583 Sum_probs=25.2
Q ss_pred CCcee-eeCCCCCCCceecCCCCCCCcceecccCCCCc
Q 025899 189 EPTYC-VCNQVSYGEMVACDNPNCKIEWFHFGCVGLKE 225 (246)
Q Consensus 189 ~~~~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cv~l~~ 225 (246)
.+++| +|++.-+ +-+.|.. |. --+|-.|+....
T Consensus 13 ~pt~C~~C~~~l~-qG~~C~~--C~-~~~H~~C~~~v~ 46 (52)
T 1faq_A 13 KLAFCDICQKFLL-NGFRCQT--CG-YKFHEHCSTKVP 46 (52)
T ss_dssp SCEECTTSSSEEC-SEEECTT--TT-CCBCSTTSSSSS
T ss_pred CCcCCCCcccccc-cCCEeCC--CC-CeEChhHHhhCc
Confidence 46899 9988766 6778998 77 569999987443
No 141
>2d8x_A Protein pinch; LIM domain, pinch protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=33.72 E-value=20 Score=23.20 Aligned_cols=45 Identities=22% Similarity=0.559 Sum_probs=28.2
Q ss_pred cee-eeCCCCCCCceecCCCCCCCcceecccCC-------CCcc----CCCceeCcCCcccc
Q 025899 191 TYC-VCNQVSYGEMVACDNPNCKIEWFHFGCVG-------LKEQ----PKGKWYCPDCAALK 240 (246)
Q Consensus 191 ~~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cv~-------l~~~----~~~~w~C~~C~~~~ 240 (246)
..| .|+++-.+.+|.-.+ .-||..|.. |... ..+..||..|....
T Consensus 6 ~~C~~C~~~I~~~~~~a~~-----~~~H~~CF~C~~C~~~L~~~~f~~~~g~~yC~~c~~~~ 62 (70)
T 2d8x_A 6 SGCHQCGEFIIGRVIKAMN-----NSWHPECFRCDLCQEVLADIGFVKNAGRHLCRPCHNRE 62 (70)
T ss_dssp SBCSSSCCBCCSCCEEETT-----EEECTTTSBCSSSCCBCSSSCCEEETTEEECHHHHHHH
T ss_pred CcCccCCCEecceEEEECc-----ccccccCCEeCCCCCcCCCCccEeECCeEECHHHhhhh
Confidence 457 888876676666555 456877754 2221 25778888886443
No 142
>2dj7_A Actin-binding LIM protein 3; LIM domain, Zn binding protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=33.05 E-value=60 Score=21.73 Aligned_cols=45 Identities=22% Similarity=0.473 Sum_probs=28.1
Q ss_pred Ccee-eeCCCCC-CCceecCCCCCCCcceecccCC-------CCc---cCCCceeCcCCccc
Q 025899 190 PTYC-VCNQVSY-GEMVACDNPNCKIEWFHFGCVG-------LKE---QPKGKWYCPDCAAL 239 (246)
Q Consensus 190 ~~~C-~C~~~~~-g~mi~Cd~~~C~~~wfH~~Cv~-------l~~---~~~~~w~C~~C~~~ 239 (246)
...| .|+++-+ +++|.-.+ .-||..|.. |.. ...+..||..|...
T Consensus 15 ~~~C~~C~~~I~~~~~v~a~~-----~~wH~~CF~C~~C~~~L~~~~~~~~g~~yC~~~y~~ 71 (80)
T 2dj7_A 15 PSHCAGCKEEIKHGQSLLALD-----KQWHVSCFKCQTCSVILTGEYISKDGVPYCESDYHA 71 (80)
T ss_dssp CSCCTTTCCCCSSSCCEEETT-----EEECTTTCBCSSSCCBCSSCCEEETTEEECTTHHHH
T ss_pred CCCCcCcCCeeCCCeEEEECC-----cccccccCCcCcCCCCcCCCeEEECCEEECHHHHHH
Confidence 4567 9988765 67766554 346777754 221 12578888888644
No 143
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=32.88 E-value=8.9 Score=27.24 Aligned_cols=44 Identities=30% Similarity=0.705 Sum_probs=28.9
Q ss_pred Ccee-eeCCCCCCCceecCCCCCCCcceecccCC--CCccCCCceeCcCCcccc
Q 025899 190 PTYC-VCNQVSYGEMVACDNPNCKIEWFHFGCVG--LKEQPKGKWYCPDCAALK 240 (246)
Q Consensus 190 ~~~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cv~--l~~~~~~~w~C~~C~~~~ 240 (246)
...| +|.... .+.+.|-. |. ..||..|+. +... ...||.|+..-
T Consensus 22 ~~~C~IC~~~~-~~p~~~~~--Cg-H~FC~~Ci~~~~~~~---~~~CP~Cr~~~ 68 (100)
T 3lrq_A 22 VFRCFICMEKL-RDARLCPH--CS-KLCCFSCIRRWLTEQ---RAQCPHCRAPL 68 (100)
T ss_dssp HTBCTTTCSBC-SSEEECTT--TC-CEEEHHHHHHHHHHT---CSBCTTTCCBC
T ss_pred CCCCccCCccc-cCccccCC--CC-ChhhHHHHHHHHHHC---cCCCCCCCCcC
Confidence 4567 998764 34555566 66 679999985 2222 26899998653
No 144
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=32.85 E-value=7.6 Score=30.16 Aligned_cols=46 Identities=20% Similarity=0.496 Sum_probs=29.1
Q ss_pred Ccee-eeCCCCCCCceecCCCCCCCcceecccCCCCccCCCceeCcCCcccc
Q 025899 190 PTYC-VCNQVSYGEMVACDNPNCKIEWFHFGCVGLKEQPKGKWYCPDCAALK 240 (246)
Q Consensus 190 ~~~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cv~l~~~~~~~w~C~~C~~~~ 240 (246)
...| ||..... +.+.+-. |. ..||..|+.---. .+...||.|+..-
T Consensus 54 ~~~C~IC~~~~~-~p~~~~~--Cg-H~fC~~Ci~~~~~-~~~~~CP~Cr~~~ 100 (165)
T 2ckl_B 54 ELMCPICLDMLK-NTMTTKE--CL-HRFCADCIITALR-SGNKECPTCRKKL 100 (165)
T ss_dssp HHBCTTTSSBCS-SEEEETT--TC-CEEEHHHHHHHHH-TTCCBCTTTCCBC
T ss_pred CCCCcccChHhh-CcCEeCC--CC-ChhHHHHHHHHHH-hCcCCCCCCCCcC
Confidence 4468 9976643 3444444 66 7899999852111 2357899998654
No 145
>1m1j_C Fibrinogen gamma chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_C
Probab=32.27 E-value=1.6e+02 Score=26.66 Aligned_cols=90 Identities=20% Similarity=0.138 Sum_probs=39.8
Q ss_pred HHHHHHHHHHH-HHHHHHHH---HHHHHHHHHHHHHHHHHHhhhCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 025899 17 ILQKKYALLRD-LDKSLQEI---QRQNEQRCEQEIEDLMREIRAGNITPNTSLIRFSDDALDEQKHSIRIADEKVALAVQ 92 (246)
Q Consensus 17 El~r~l~~Ire-LD~~~~~~---~~~~~~~~~~~l~~~~k~~~~gs~~~~~~~~~l~~~I~~~~~~~~~l~dEKv~LA~q 92 (246)
+|+..|...+. +|..++++ ++++++.... +..+++.++..-....+..... +...-....++.++.+.+ ..
T Consensus 24 ~i~d~L~k~e~~V~~~l~~LE~~l~elsn~ts~-v~~Lvk~iq~~~~~~Q~~~~d~---~e~~tq~skkml~~~~~~-e~ 98 (409)
T 1m1j_C 24 GIADFFNKYRLTTDGELLEIEGLLQQATNSTGS-IEYLIQHIKTIYPSEKQTLPQS---IEQLTQKSKKIIEEIIRY-EN 98 (409)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHSCSSTTCCSSC---HHHHHHHHHHHHHHHHHT-HH
T ss_pred cHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhcccccCCCCCc---hhhHHHHHHHHHHHHHHH-HH
Confidence 34455554444 55555543 3344444443 3345555444422222222222 222334555666666665 23
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 025899 93 AYDLVDTHIQQLDQYLKNF 111 (246)
Q Consensus 93 ~~dlVd~hirrLD~dl~kf 111 (246)
+.-..+..|+.|...+...
T Consensus 99 ~~~~~~~~i~~l~~~~~~~ 117 (409)
T 1m1j_C 99 TILAHENTIQQLTDMHIMN 117 (409)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HhcchHHHHHHHHHHHHhh
Confidence 3333444555555444333
No 146
>3fs3_A Nucleosome assembly protein 1, putative; protein localization, histone recognition, structural analysis, CHA; 2.30A {Plasmodium falciparum} PDB: 3hfd_A 3gyw_A 3gyv_A
Probab=31.74 E-value=99 Score=27.52 Aligned_cols=32 Identities=9% Similarity=0.221 Sum_probs=22.1
Q ss_pred HHHHhhcccHHHHHHHHHHHHHHHHHHHHHHH
Q 025899 7 FQANLESLPNILQKKYALLRDLDKSLQEIQRQ 38 (246)
Q Consensus 7 fle~l~~LP~El~r~l~~IreLD~~~~~~~~~ 38 (246)
|-+.+++||.++++.+..|++|...+..+-.+
T Consensus 40 ~~~~m~sLp~~v~~rI~aLk~lQ~E~~~le~e 71 (359)
T 3fs3_A 40 YDDKMTDLTEEQKETLKKLKLYQKEYYDYESK 71 (359)
T ss_dssp -----CCSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34678999999999999999888776664443
No 147
>1ptq_A Protein kinase C delta type; phosphotransferase; 1.95A {Mus musculus} SCOP: g.49.1.1 PDB: 1ptr_A*
Probab=31.68 E-value=18 Score=22.00 Aligned_cols=32 Identities=28% Similarity=0.830 Sum_probs=24.8
Q ss_pred CCcee-eeCCCCCC---CceecCCCCCCCcceecccCCC
Q 025899 189 EPTYC-VCNQVSYG---EMVACDNPNCKIEWFHFGCVGL 223 (246)
Q Consensus 189 ~~~~C-~C~~~~~g---~mi~Cd~~~C~~~wfH~~Cv~l 223 (246)
.+++| +|+..-+| +-+.|.. |. --.|-.|+..
T Consensus 10 ~pt~C~~C~~~l~g~~~qg~~C~~--C~-~~~H~~C~~~ 45 (50)
T 1ptq_A 10 SPTFCDHCGSLLWGLVKQGLKCED--CG-MNVHHKCREK 45 (50)
T ss_dssp SCCBCTTTCCBCCSSSSCEEEETT--TC-CEECHHHHTT
T ss_pred CCCCcCCCCceeeccCCccCEeCC--CC-CeECHHHhhh
Confidence 46789 99988776 5688998 77 5689999764
No 148
>1x68_A FHL5 protein; four-and-A-half LIM protein 5, zinc finger domain, AN actin- interacting protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=31.65 E-value=47 Score=21.80 Aligned_cols=44 Identities=18% Similarity=0.553 Sum_probs=26.8
Q ss_pred ee-eeCCCCCC----CceecCCCCCCCcceecccCC-------CCcc----CCCceeCcCCcccc
Q 025899 192 YC-VCNQVSYG----EMVACDNPNCKIEWFHFGCVG-------LKEQ----PKGKWYCPDCAALK 240 (246)
Q Consensus 192 ~C-~C~~~~~g----~mi~Cd~~~C~~~wfH~~Cv~-------l~~~----~~~~w~C~~C~~~~ 240 (246)
.| .|+++-++ ..|.-.+ .-||..|.. |... ..+..||..|....
T Consensus 7 ~C~~C~~~I~~~g~~~~~~a~~-----~~wH~~CF~C~~C~~~L~~~~f~~~~g~~yC~~cy~~~ 66 (76)
T 1x68_A 7 GCVACSKPISGLTGAKFICFQD-----SQWHSECFNCGKCSVSLVGKGFLTQNKEIFCQKCGSGM 66 (76)
T ss_dssp CCTTTCCCCCTTTTCCEEEETT-----EEEEGGGCBCTTTCCBCSSSCEEEETTEEEETTTTCCC
T ss_pred CCccCCCcccCCCCceeEEECC-----cccCcccCChhhCCCcCCCCceEeECCEEECHHHhhhh
Confidence 56 78877554 5555544 345877644 3322 25788999887543
No 149
>3umh_A Amyloid beta A4 protein; metal binding site, metal binding, cell surface, secretory P metal binding protein; 2.00A {Homo sapiens} SCOP: a.47.4.1 PDB: 3umi_A 3umk_A 1rw6_A 3nyl_A 3nyj_A 1tkn_A
Probab=31.03 E-value=2.2e+02 Score=23.33 Aligned_cols=26 Identities=15% Similarity=0.445 Sum_probs=19.3
Q ss_pred cHHHHHHHhhcccHHHHHHHHHHHHH
Q 025899 3 FLDEFQANLESLPNILQKKYALLRDL 28 (246)
Q Consensus 3 yLe~fle~l~~LP~El~r~l~~IreL 28 (246)
.|+.|+..+.+-|....+.|.-++.+
T Consensus 104 Ale~y~~ALq~~pp~~~~il~aLk~y 129 (211)
T 3umh_A 104 ALENYITALQAVPPRPRHVFNMLKKY 129 (211)
T ss_dssp HHHHHHHHHTCSSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCChHHHHHHHHHH
Confidence 46788888888888777777766653
No 150
>2d8y_A Eplin protein; LIM domain, epithelial protein LOST in neoplasm, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=30.73 E-value=41 Score=23.05 Aligned_cols=45 Identities=24% Similarity=0.545 Sum_probs=27.3
Q ss_pred Ccee-eeCCCCC-CCceecCCCCCCCcceecccCC-------CCc----cCCCceeCcCCccc
Q 025899 190 PTYC-VCNQVSY-GEMVACDNPNCKIEWFHFGCVG-------LKE----QPKGKWYCPDCAAL 239 (246)
Q Consensus 190 ~~~C-~C~~~~~-g~mi~Cd~~~C~~~wfH~~Cv~-------l~~----~~~~~w~C~~C~~~ 239 (246)
...| .|+.+-+ +++|.-.+ .-||..|.. |.. ...+..||..|...
T Consensus 15 ~~~C~~C~~~I~~~~~v~a~~-----~~~H~~CF~C~~C~~~L~~~~~~~~~g~~yC~~~y~~ 72 (91)
T 2d8y_A 15 RETCVECQKTVYPMERLLANQ-----QVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQ 72 (91)
T ss_dssp SCBCTTTCCBCCTTSEEECSS-----SEEETTTCBCTTTCCBCCTTTCCCSSSCCCCHHHHHH
T ss_pred CCcCccCCCccCCceeEEECC-----CEECCCCCeeCCCCCCCCCCCcEeECCEEECHHHHHH
Confidence 4567 8988765 47775444 446877744 222 12567888777543
No 151
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=30.62 E-value=16 Score=23.45 Aligned_cols=45 Identities=18% Similarity=0.360 Sum_probs=25.3
Q ss_pred Ccee-eeCCCCCCCceecCCCCCCCcceecccCCCCccCCCceeCcCCcccc
Q 025899 190 PTYC-VCNQVSYGEMVACDNPNCKIEWFHFGCVGLKEQPKGKWYCPDCAALK 240 (246)
Q Consensus 190 ~~~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cv~l~~~~~~~w~C~~C~~~~ 240 (246)
...| +|...... .+..-. |. ..||..|+.--.. ....||.|+..-
T Consensus 5 ~~~C~IC~~~~~~-~~~~~~--C~-H~fc~~Ci~~~~~--~~~~CP~Cr~~~ 50 (68)
T 1chc_A 5 AERCPICLEDPSN-YSMALP--CL-HAFCYVCITRWIR--QNPTCPLCKVPV 50 (68)
T ss_dssp CCCCSSCCSCCCS-CEEETT--TT-EEESTTHHHHHHH--HSCSTTTTCCCC
T ss_pred CCCCeeCCccccC-CcEecC--CC-CeeHHHHHHHHHh--CcCcCcCCChhh
Confidence 3456 88766332 222233 55 5699999851111 125799998653
No 152
>3qne_A Seryl-tRNA synthetase, cytoplasmic; amino acid biosynthesis, CTG-clade, codon ambiguity, pathoge II aminoacyl-tRNA synthetase family; 2.00A {Candida albicans} PDB: 3qo7_A* 3qo8_A* 3qo5_A
Probab=30.10 E-value=2.3e+02 Score=26.12 Aligned_cols=21 Identities=14% Similarity=0.218 Sum_probs=14.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhh
Q 025899 97 VDTHIQQLDQYLKNFDEELRR 117 (246)
Q Consensus 97 Vd~hirrLD~dl~kfe~eL~~ 117 (246)
|...|..|+..+..+++++..
T Consensus 83 l~~~i~~le~~~~~~~~~~~~ 103 (485)
T 3qne_A 83 LSNEKKEIIEKEAEADKNLRS 103 (485)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 456677777777777776654
No 153
>2dar_A PDZ and LIM domain protein 5; enigma homolog protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=29.85 E-value=34 Score=23.45 Aligned_cols=45 Identities=27% Similarity=0.488 Sum_probs=29.0
Q ss_pred Ccee-eeCCCCCCCceecCCCCCCCcceecccCC-------CCc----cCCCceeCcCCccc
Q 025899 190 PTYC-VCNQVSYGEMVACDNPNCKIEWFHFGCVG-------LKE----QPKGKWYCPDCAAL 239 (246)
Q Consensus 190 ~~~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cv~-------l~~----~~~~~w~C~~C~~~ 239 (246)
...| .|+++-.++.|...+ .-||..|.. |.. ...+..||..|...
T Consensus 25 ~~~C~~C~~~I~~~~v~a~~-----~~~H~~CF~C~~C~~~L~~~~f~~~~g~~yC~~cy~~ 81 (90)
T 2dar_A 25 TPMCAHCNQVIRGPFLVALG-----KSWHPEEFNCAHCKNTMAYIGFVEEKGALYCELCYEK 81 (90)
T ss_dssp CCBBSSSCCBCCSCEEEETT-----EEECTTTCBCSSSCCBCSSSCBEESSSCEECHHHHHH
T ss_pred CCCCccCCCEecceEEEECC-----ccccccCCccCCCCCCCCCCEeEeECCEEECHHHHHH
Confidence 4467 999887777776555 446877644 222 13578889888644
No 154
>3lss_A Seryl-tRNA synthetase; aminoacyl-tRNA synthetase, tRNA ligase, AARS, serrs, translation, ATP-binding, nucleotide-binding, structural genomics; HET: ATP; 1.95A {Trypanosoma brucei} PDB: 3lsq_A*
Probab=29.79 E-value=3.3e+02 Score=25.05 Aligned_cols=24 Identities=13% Similarity=0.218 Sum_probs=17.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhh
Q 025899 94 YDLVDTHIQQLDQYLKNFDEELRR 117 (246)
Q Consensus 94 ~dlVd~hirrLD~dl~kfe~eL~~ 117 (246)
...|...|..|+..+..+++++..
T Consensus 113 ~~~l~~~i~~le~~~~~~~~~~~~ 136 (484)
T 3lss_A 113 SKDLSDQVAGLAKEAQQLEEERDK 136 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345667788888888888877654
No 155
>2fiy_A Protein FDHE homolog; FDHE protein, structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pseudomonas aeruginosa} SCOP: e.59.1.1
Probab=29.44 E-value=16 Score=31.94 Aligned_cols=27 Identities=30% Similarity=0.840 Sum_probs=18.8
Q ss_pred CCcee-eeCCCCC-----------C-CceecCCCCCCCccee
Q 025899 189 EPTYC-VCNQVSY-----------G-EMVACDNPNCKIEWFH 217 (246)
Q Consensus 189 ~~~~C-~C~~~~~-----------g-~mi~Cd~~~C~~~wfH 217 (246)
...|| +|+.... | .++.|.- |..+|.+
T Consensus 181 ~~~~CPvCGs~P~~s~l~~~g~~~G~R~l~Cs~--C~t~W~~ 220 (309)
T 2fiy_A 181 SRTLCPACGSPPMAGMIRQGGKETGLRYLSCSL--CACEWHY 220 (309)
T ss_dssp TCSSCTTTCCCEEEEEEEC----CCEEEEEETT--TCCEEEC
T ss_pred cCCCCCCCCCcCceeEEeecCCCCCcEEEEeCC--CCCEEee
Confidence 46799 9987531 2 2678998 7778844
No 156
>3u50_C Telomerase-associated protein 82; TEB1, processivity factor, DNA BIND protein; 2.50A {Tetrahymena thermophila}
Probab=29.35 E-value=15 Score=29.36 Aligned_cols=17 Identities=12% Similarity=0.598 Sum_probs=12.3
Q ss_pred CCccCCCceeCcCCccc
Q 025899 223 LKEQPKGKWYCPDCAAL 239 (246)
Q Consensus 223 l~~~~~~~w~C~~C~~~ 239 (246)
+.....|.|+|+.|-..
T Consensus 52 V~~~~~g~~~CekC~~~ 68 (172)
T 3u50_C 52 VLKYHGDSFFCESCQQF 68 (172)
T ss_dssp EEEETTTEEEETTTTEE
T ss_pred eeeCCCCeEECCCCCCC
Confidence 33345689999999764
No 157
>4gdk_C APG16-like 1, autophagy-related protein 16-1; protein-protein conjugate, protein-protein complex, ubiquiti protein, E3 ligase, ubiquitin-like fold; 2.70A {Homo sapiens} PDB: 4gdl_C
Probab=28.54 E-value=78 Score=18.52 Aligned_cols=33 Identities=12% Similarity=0.115 Sum_probs=24.2
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 025899 13 SLPNILQKKYALLRDLDKSLQEIQRQNEQRCEQ 45 (246)
Q Consensus 13 ~LP~El~r~l~~IreLD~~~~~~~~~~~~~~~~ 45 (246)
++|..-.+.+..++..|..-.++..++-+..++
T Consensus 2 ~~~~Wrr~I~~~Lr~RdR~q~~~F~diI~~yNk 34 (36)
T 4gdk_C 2 HMPRWKRHISEQLRRRDRLQRQAFEEIILQYNK 34 (36)
T ss_dssp -CCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHhhHHHHHHHHHHHHHhcc
Confidence 578888899999999998877766666554443
No 158
>2cu8_A Cysteine-rich protein 2; CRP2, CRIP2, ESP1 protein, zinc-binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=28.45 E-value=38 Score=22.25 Aligned_cols=44 Identities=30% Similarity=0.578 Sum_probs=28.5
Q ss_pred cee-eeCCCCC-CCceecCCCCCCCcceecccCC-------CCcc----CCCceeCc-CCccc
Q 025899 191 TYC-VCNQVSY-GEMVACDNPNCKIEWFHFGCVG-------LKEQ----PKGKWYCP-DCAAL 239 (246)
Q Consensus 191 ~~C-~C~~~~~-g~mi~Cd~~~C~~~wfH~~Cv~-------l~~~----~~~~w~C~-~C~~~ 239 (246)
..| .|+++-+ +++|...+ .-||..|.. |... ..+..||. .|...
T Consensus 10 ~~C~~C~~~I~~~~~v~a~~-----~~~H~~CF~C~~C~~~L~~~~~~~~~g~~yC~~~cy~~ 67 (76)
T 2cu8_A 10 SKCPKCDKTVYFAEKVSSLG-----KDWHKFCLKCERCSKTLTPGGHAEHDGKPFCHKPCYAT 67 (76)
T ss_dssp CBCTTTCCBCCTTTEEEETT-----EEEETTTCBCSSSCCBCCTTSCEEETTEEECTTTHHHH
T ss_pred CCCcCCCCEeECCeEEEECC-----eEeeCCCCCCCCCCCccCCCceEeECCEEecchHHHHH
Confidence 467 8988866 77776555 446877744 2221 25788998 68644
No 159
>1n0z_A ZNF265; zinc finger, RNA splicing, transcription; NMR {Homo sapiens} SCOP: g.41.11.1
Probab=28.02 E-value=25 Score=21.56 Aligned_cols=12 Identities=42% Similarity=1.503 Sum_probs=8.7
Q ss_pred CCceeCc--CCccc
Q 025899 228 KGKWYCP--DCAAL 239 (246)
Q Consensus 228 ~~~w~C~--~C~~~ 239 (246)
.|+|+|+ .|..-
T Consensus 12 ~GDW~C~~~~C~~~ 25 (45)
T 1n0z_A 12 DGDWICPDKKCGNV 25 (45)
T ss_dssp SSSCBCSSTTTCCB
T ss_pred CCCcCCCCCCCCCE
Confidence 5888998 67543
No 160
>2dq0_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: SSA; 2.60A {Pyrococcus horikoshii} PDB: 2dq1_A* 2dq2_A 2zr2_A* 2zr3_A
Probab=27.98 E-value=2.1e+02 Score=26.03 Aligned_cols=21 Identities=10% Similarity=0.316 Sum_probs=14.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhh
Q 025899 97 VDTHIQQLDQYLKNFDEELRR 117 (246)
Q Consensus 97 Vd~hirrLD~dl~kfe~eL~~ 117 (246)
|...|+.|+..+..+++++..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~ 101 (455)
T 2dq0_A 81 IVKRIGELENEVEELKKKIDY 101 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 445666777777777776654
No 161
>3abh_A Pacsin2, protein kinase C and casein kinase substrate in neurons protein 2; helix bundle, coiled-coil, endocytosis; 2.00A {Homo sapiens} PDB: 3q0k_A 3lll_A 3hah_A 3qni_A 3hai_A 3q84_A
Probab=27.96 E-value=2.6e+02 Score=23.31 Aligned_cols=30 Identities=3% Similarity=-0.050 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 025899 70 DDALDEQKHSIRIADEKVALAVQAYDLVDT 99 (246)
Q Consensus 70 ~~I~~~~~~~~~l~dEKv~LA~q~~dlVd~ 99 (246)
.-+...+..+..+++.-..||+.+...|-.
T Consensus 88 ~aw~~i~~e~e~~a~~H~~~a~~L~~~v~~ 117 (312)
T 3abh_A 88 KAWMAFMSEAERVSELHLEVKASLMNDDFE 117 (312)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334455566677777777888877765543
No 162
>3sjb_C Golgi to ER traffic protein 1; coiled-coil, receptor complex, TA-protein biogenesis, GET PA hydrolase-transport protein complex; 3.30A {Saccharomyces cerevisiae}
Probab=27.85 E-value=1.6e+02 Score=21.03 Aligned_cols=28 Identities=11% Similarity=0.162 Sum_probs=7.1
Q ss_pred cHHHHHHHhhcccHHHHHHHHHHHHHHHHHHH
Q 025899 3 FLDEFQANLESLPNILQKKYALLRDLDKSLQE 34 (246)
Q Consensus 3 yLe~fle~l~~LP~El~r~l~~IreLD~~~~~ 34 (246)
|-+.||..| +|. .......+.|-..+.+
T Consensus 7 Yh~~wi~~l--~~~--s~~a~~~~~lk~E~~~ 34 (93)
T 3sjb_C 7 YHEKWISKF--APG--NELSKKYLAKVKERHE 34 (93)
T ss_dssp -----------------CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH--ccC--cHhHHHHHHHHHHHHH
Confidence 556666666 664 4444444544444444
No 163
>1nyp_A Pinch protein; LIM domain, protein recognition, cell adhesion; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3 PDB: 1u5s_B
Probab=27.82 E-value=23 Score=22.62 Aligned_cols=43 Identities=21% Similarity=0.381 Sum_probs=26.3
Q ss_pred cee-eeCCCCCCCceecCCCCCCCcceecccCC-------CCcc----CCCceeCcCCcc
Q 025899 191 TYC-VCNQVSYGEMVACDNPNCKIEWFHFGCVG-------LKEQ----PKGKWYCPDCAA 238 (246)
Q Consensus 191 ~~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cv~-------l~~~----~~~~w~C~~C~~ 238 (246)
..| .|+++-++++|...+ .-||..|.. |... ..+..||..|..
T Consensus 6 ~~C~~C~~~I~~~~~~a~~-----~~~H~~CF~C~~C~~~L~~~~~~~~~g~~yC~~~y~ 60 (66)
T 1nyp_A 6 PICGACRRPIEGRVVNAMG-----KQWHVEHFVCAKCEKPFLGHRHYERKGLAYCETHYN 60 (66)
T ss_dssp CEETTTTEECCSCEECCTT-----SBEETTTCBCTTTCCBCSSSCCEEETTEEECHHHHH
T ss_pred CCCcccCCEecceEEEECc-----cccccCcCEECCCCCCCCCCceEeECCcEECHHHHH
Confidence 356 888776677666554 336887744 2221 256788877754
No 164
>2cur_A Skeletal muscle LIM-protein 1; four and A half LIM domains protein 1, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=27.57 E-value=24 Score=22.80 Aligned_cols=44 Identities=23% Similarity=0.539 Sum_probs=26.7
Q ss_pred cee-eeCCCCCCCceecCCCCCCCcceecccCC-------CCc----cCCCceeCcCCccc
Q 025899 191 TYC-VCNQVSYGEMVACDNPNCKIEWFHFGCVG-------LKE----QPKGKWYCPDCAAL 239 (246)
Q Consensus 191 ~~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cv~-------l~~----~~~~~w~C~~C~~~ 239 (246)
..| .|+++-+++.|.-.+ .-||..|.. |.. ...+..||..|...
T Consensus 6 ~~C~~C~~~I~~~~~~a~~-----~~~H~~CF~C~~C~~~L~~~~~~~~~~~~yC~~cy~~ 61 (69)
T 2cur_A 6 SGCVKCNKAITSGGITYQD-----QPWHADCFVCVTCSKKLAGQRFTAVEDQYYCVDCYKN 61 (69)
T ss_dssp CCCSSSCCCCCTTCEEETT-----EEECTTTTBCTTTCCBCTTSCEEECSSCEEEHHHHHH
T ss_pred CCCcccCCEeCcceEEECc-----cccccCcCEECCCCCCCCCCccEeECCEEECHHHhHH
Confidence 356 888876666665554 446877643 222 12567888877643
No 165
>2l7p_A Histone-lysine N-methyltransferase ASHH2; CW-domain; NMR {Arabidopsis thaliana}
Probab=27.17 E-value=21 Score=26.01 Aligned_cols=31 Identities=23% Similarity=0.724 Sum_probs=19.9
Q ss_pred CCceecCCCCCCCcceecccCCCC--ccCCCceeCcC
Q 025899 201 GEMVACDNPNCKIEWFHFGCVGLK--EQPKGKWYCPD 235 (246)
Q Consensus 201 g~mi~Cd~~~C~~~wfH~~Cv~l~--~~~~~~w~C~~ 235 (246)
..-|+||. |. .|=-+. .++. ....++|||..
T Consensus 26 ~~WVQCD~--C~-KWRrLP-~~~~~~~~~pd~W~C~m 58 (100)
T 2l7p_A 26 SAWVRCDD--CF-KWRRIP-ASVVGSIDESSRWICMN 58 (100)
T ss_dssp SEEEECTT--TC-CEEEEC-HHHHTTSTTSSCCCGGG
T ss_pred CeEEeeCC--CC-ccccCC-hhHccccCCCCCceeCC
Confidence 45799998 77 996554 2211 12248999965
No 166
>3lhp_S 4E10_D0_1ISEA_004_N (T93); epitope-scaffold, immune system; 2.70A {Artificial gene} PDB: 1y69_8
Probab=26.95 E-value=2e+02 Score=21.53 Aligned_cols=29 Identities=17% Similarity=0.254 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 025899 88 ALAVQAYDLVDTHIQQLDQYLKNFDEELR 116 (246)
Q Consensus 88 ~LA~q~~dlVd~hirrLD~dl~kfe~eL~ 116 (246)
..-.++..|-|++|.++|.-++.=+.||.
T Consensus 93 ~~e~eIQKLTDkyIkkID~ll~~KEKEIm 121 (123)
T 3lhp_S 93 QSLWDVQKLTDAAIKKIEAALADMEAWLT 121 (123)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34456777888999999999988888765
No 167
>2d8z_A Four and A half LIM domains 2; skeletal muscle LIM-protein 3, LIM-domain protein DRAL, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=26.94 E-value=36 Score=21.86 Aligned_cols=44 Identities=23% Similarity=0.370 Sum_probs=26.5
Q ss_pred cee-eeCCCCCCCceecCCCCCCCcceecccCC-------CCcc----CCCceeCcCCccc
Q 025899 191 TYC-VCNQVSYGEMVACDNPNCKIEWFHFGCVG-------LKEQ----PKGKWYCPDCAAL 239 (246)
Q Consensus 191 ~~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cv~-------l~~~----~~~~w~C~~C~~~ 239 (246)
..| .|+++-.++.|.-.+ .-||..|.. |... ..+..||..|...
T Consensus 6 ~~C~~C~~~I~~~~~~a~~-----~~~H~~CF~C~~C~~~L~~~~~~~~~~~~yC~~cy~~ 61 (70)
T 2d8z_A 6 SGCVQCKKPITTGGVTYRE-----QPWHKECFVCTACRKQLSGQRFTARDDFAYCLNCFCD 61 (70)
T ss_dssp CBCSSSCCBCCSSEEESSS-----SEEETTTSBCSSSCCBCTTSCCEESSSSEECHHHHHH
T ss_pred CCCcccCCeeccceEEECc-----cccCCCCCccCCCCCcCCcCceEeeCCeEECHHHHHH
Confidence 356 888876666665544 346877744 2221 2577888877643
No 168
>2ayu_A Nucleosome assembly protein; histone chaperone; 3.00A {Saccharomyces cerevisiae} SCOP: d.305.1.1 PDB: 2z2r_A
Probab=26.89 E-value=1.4e+02 Score=27.12 Aligned_cols=32 Identities=22% Similarity=0.394 Sum_probs=25.0
Q ss_pred HHHhhcccHHHHHHHHHHHHHHHHHHHHHHHH
Q 025899 8 QANLESLPNILQKKYALLRDLDKSLQEIQRQN 39 (246)
Q Consensus 8 le~l~~LP~El~r~l~~IreLD~~~~~~~~~~ 39 (246)
...|++||..+++.+.-|+.|..++..+-.+.
T Consensus 82 ~~~i~sLp~~v~~rI~aLk~lQ~e~~~le~ef 113 (417)
T 2ayu_A 82 SGYVGGLPKNVKEKLLSLKTLQSELFEVEKEF 113 (417)
T ss_dssp HHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchhhcCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34678899999999999999888877654433
No 169
>3hct_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 3hcu_A 2eci_A 2jmd_A
Probab=26.87 E-value=14 Score=26.90 Aligned_cols=45 Identities=18% Similarity=0.407 Sum_probs=27.1
Q ss_pred CCCcee-eeCCCCCCCceecCCCCCCCcceecccCC--CCccCCCceeCcCCcccc
Q 025899 188 NEPTYC-VCNQVSYGEMVACDNPNCKIEWFHFGCVG--LKEQPKGKWYCPDCAALK 240 (246)
Q Consensus 188 ~~~~~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cv~--l~~~~~~~w~C~~C~~~~ 240 (246)
.+...| +|....... +.. . |. ..|+..|+. +... ...||.|+..-
T Consensus 16 ~~~~~C~IC~~~~~~p-~~~-~--Cg-H~fC~~Ci~~~~~~~---~~~CP~Cr~~~ 63 (118)
T 3hct_A 16 ESKYECPICLMALREA-VQT-P--CG-HRFCKACIIKSIRDA---GHKCPVDNEIL 63 (118)
T ss_dssp CGGGBCTTTCSBCSSE-EEC-T--TS-CEEEHHHHHHHHHHH---CSBCTTTCCBC
T ss_pred CCCCCCCcCChhhcCe-EEC-C--cC-ChhhHHHHHHHHhhC---CCCCCCCCCCc
Confidence 445678 998764433 332 3 66 679999975 2211 13799997653
No 170
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=26.24 E-value=3.5e+02 Score=24.12 Aligned_cols=22 Identities=14% Similarity=0.034 Sum_probs=9.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 025899 71 DALDEQKHSIRIADEKVALAVQ 92 (246)
Q Consensus 71 ~I~~~~~~~~~l~dEKv~LA~q 92 (246)
.|.+.....+++-..|-.||.|
T Consensus 464 ~~~~~~~~~~~~~~~~~~~~~~ 485 (487)
T 3oja_A 464 ALASANATLQELVVREQNLASQ 485 (487)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHhcccHHHHHHHHHHHHHHh
Confidence 3444444444444444444443
No 171
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=26.11 E-value=1.3e+02 Score=18.99 Aligned_cols=43 Identities=12% Similarity=0.132 Sum_probs=25.7
Q ss_pred cHHHHHHHhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 025899 3 FLDEFQANLESLPNILQKKYALLRDLDKSLQEIQRQNEQRCEQ 45 (246)
Q Consensus 3 yLe~fle~l~~LP~El~r~l~~IreLD~~~~~~~~~~~~~~~~ 45 (246)
|+-+||-....-+.|+--...++.+|-.++..+..+++....+
T Consensus 6 fIk~~LG~~~p~~~d~eaLk~E~~eLk~k~~~L~~~~~el~~~ 48 (53)
T 2yy0_A 6 FLKHHLGAATPENPEIELLRLELAEMKEKYEAIVEENKKLKAK 48 (53)
T ss_dssp ----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5556665445567888888888888888888887777766554
No 172
>1l1o_C Replication protein A 70 kDa DNA-binding subunit; eukaryotic SSB, ssDNA binding protein, OB-fold; 2.80A {Homo sapiens} SCOP: b.40.4.3
Probab=25.69 E-value=23 Score=28.15 Aligned_cols=17 Identities=24% Similarity=0.647 Sum_probs=11.8
Q ss_pred CCccCCCceeCcCCccc
Q 025899 223 LKEQPKGKWYCPDCAAL 239 (246)
Q Consensus 223 l~~~~~~~w~C~~C~~~ 239 (246)
+.....|.|.|+.|-..
T Consensus 55 v~~~~~g~~~CekC~~~ 71 (181)
T 1l1o_C 55 VIDQQNGLYRCEKCDTE 71 (181)
T ss_dssp CEEETTTEEEETTTTEE
T ss_pred cccCCCCeEECCCCCCc
Confidence 33344688999999643
No 173
>1lwu_C Fibrinogen gamma chain; heterotrimer, protein-peptide complex, blood clotting; HET: NDG MAN NAG BMA GAL; 2.80A {Petromyzon marinus} SCOP: d.171.1.1 h.1.8.1 PDB: 1n73_C*
Probab=25.63 E-value=2.7e+02 Score=24.29 Aligned_cols=36 Identities=11% Similarity=0.147 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 025899 79 SIRIADEKVALAVQAYDLVDTHIQQLDQYLKNFDEE 114 (246)
Q Consensus 79 ~~~l~dEKv~LA~q~~dlVd~hirrLD~dl~kfe~e 114 (246)
.+.-.++.|..-+..++-++..|.+|...+..++..
T Consensus 20 ~i~~~~~~i~~L~~~l~~~~~~i~~l~~~i~~l~~~ 55 (323)
T 1lwu_C 20 IGVSHDAQIQELSEMWRVNQQFVTRLQQQLVDIRQT 55 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333344455555555555666777777777666654
No 174
>2yo3_A General control protein GCN4, putative inner MEMB protein, general control protein...; HANS motif, YADA-like head, ylhead; 2.00A {Saccharomyces cerevisiae}
Probab=25.00 E-value=2.9e+02 Score=23.48 Aligned_cols=45 Identities=9% Similarity=0.135 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 025899 70 DDALDEQKHSIRIADEKVALAVQAYDLVDTHIQQLDQYLKNFDEE 114 (246)
Q Consensus 70 ~~I~~~~~~~~~l~dEKv~LA~q~~dlVd~hirrLD~dl~kfe~e 114 (246)
.++...+..+..+-|.|+.-.+.-++-|++.++++|..++.+...
T Consensus 201 ~QL~~s~~~an~yTd~k~~~l~n~I~~V~n~~~q~~~~~~~~~~~ 245 (268)
T 2yo3_A 201 AQLKRSVEEANTYTDQKMGEMNSKIKGVENKMKQIEDKIEEILSK 245 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 355567778889999999999999999999999999888776654
No 175
>4g2k_A General control protein GCN4, envelope glycoprote chimera; GP2-GCN4 fusion, viral protein; 1.90A {Saccharomyces cerevisiae}
Probab=24.91 E-value=2.2e+02 Score=21.27 Aligned_cols=39 Identities=15% Similarity=0.315 Sum_probs=27.4
Q ss_pred HHHHHHHhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 025899 4 LDEFQANLESLPNILQKKYALLRDLDKSLQEIQRQNEQR 42 (246)
Q Consensus 4 Le~fle~l~~LP~El~r~l~~IreLD~~~~~~~~~~~~~ 42 (246)
+|+.+..+.++-+|+.|.=.+|..|...++.+.+.....
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~ig~L~~~l~~~aN~T~~a 61 (125)
T 4g2k_A 23 IEEILSKIYHIENEIARIKKLIGNLVSRLRRLANQTAKS 61 (125)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 355566677788888888888888888877655444433
No 176
>1wyh_A SLIM 2, skeletal muscle LIM-protein 2; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=24.85 E-value=44 Score=21.51 Aligned_cols=44 Identities=23% Similarity=0.516 Sum_probs=25.7
Q ss_pred cee-eeCCCCC--CCceecCCCCCCCcceecccCC-------CCcc----CCCceeCcCCccc
Q 025899 191 TYC-VCNQVSY--GEMVACDNPNCKIEWFHFGCVG-------LKEQ----PKGKWYCPDCAAL 239 (246)
Q Consensus 191 ~~C-~C~~~~~--g~mi~Cd~~~C~~~wfH~~Cv~-------l~~~----~~~~w~C~~C~~~ 239 (246)
..| .|+++-+ +.+|.-.+ .-||..|.. |... ..+..||..|...
T Consensus 6 ~~C~~C~~~I~~~~~~~~a~~-----~~~H~~CF~C~~C~~~L~~~~~~~~~~~~yC~~cy~~ 63 (72)
T 1wyh_A 6 SGCSACGETVMPGSRKLEYGG-----QTWHEHCFLCSGCEQPLGSRSFVPDKGAHYCVPCYEN 63 (72)
T ss_dssp CBCSSSCCBCCSSSCEECSTT-----CCEETTTCBCTTTCCBTTTSCEEEETTEEEEHHHHHH
T ss_pred CCCccCCCccccCccEEEECc-----cccCcccCeECCCCCcCCCCccCCcCCeEECHHHHHH
Confidence 457 8888755 45555554 346877754 2221 1567778777543
No 177
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=24.50 E-value=32 Score=23.33 Aligned_cols=48 Identities=19% Similarity=0.442 Sum_probs=27.2
Q ss_pred CCcee-eeCCCCC-CCc--eecCCCCCCCcceecccCCCCccCCCceeCcCCccccc
Q 025899 189 EPTYC-VCNQVSY-GEM--VACDNPNCKIEWFHFGCVGLKEQPKGKWYCPDCAALKN 241 (246)
Q Consensus 189 ~~~~C-~C~~~~~-g~m--i~Cd~~~C~~~wfH~~Cv~l~~~~~~~w~C~~C~~~~~ 241 (246)
+...| ||-.+-. .++ .-| . |. .-|+..|+.-.. ..+.+.||.|+..-.
T Consensus 10 ~~~~CpICle~~~~~d~~~~p~-~--CG-H~fC~~Cl~~~~-~~~~~~CP~CR~~~~ 61 (78)
T 1e4u_A 10 DPVECPLCMEPLEIDDINFFPC-T--CG-YQICRFCWHRIR-TDENGLCPACRKPYP 61 (78)
T ss_dssp CCCBCTTTCCBCCTTTTTCCSS-T--TS-CCCCHHHHHHHT-TSSCSBCTTTCCBCS
T ss_pred cCCcCCccCccCcccccccccc-C--CC-CCcCHHHHHHHH-hcCCCCCCCCCCccC
Confidence 35678 9987632 222 222 2 44 347777865111 125689999987643
No 178
>1uw0_A DNA ligase III; DNA repair, zinc finger, PARP-like finger, cell division, DNA replication, nuclear protein; HET: DNA; NMR {Homo sapiens} SCOP: g.39.1.12
Probab=24.26 E-value=12 Score=27.99 Aligned_cols=9 Identities=44% Similarity=1.357 Sum_probs=8.1
Q ss_pred cceecccCC
Q 025899 214 EWFHFGCVG 222 (246)
Q Consensus 214 ~wfH~~Cv~ 222 (246)
.|||+.|+.
T Consensus 49 ~W~H~~Cf~ 57 (117)
T 1uw0_A 49 EWYHIKCMF 57 (117)
T ss_dssp CBCCHHHHH
T ss_pred eeECcccch
Confidence 899999975
No 179
>2dmj_A Poly (ADP-ribose) polymerase family, member 1; zinc finger, PARP-1, ADPRT, NAD(+) ADP-ribosyltransferase 1, poly(ADP-ribose) synthetase 1; NMR {Homo sapiens}
Probab=24.22 E-value=15 Score=26.90 Aligned_cols=9 Identities=44% Similarity=1.505 Sum_probs=7.9
Q ss_pred cceecccCC
Q 025899 214 EWFHFGCVG 222 (246)
Q Consensus 214 ~wfH~~Cv~ 222 (246)
.|||+.|+.
T Consensus 57 ~W~H~~Cf~ 65 (106)
T 2dmj_A 57 HWYHFSCFW 65 (106)
T ss_dssp EEEETTHHH
T ss_pred EeECcCccc
Confidence 799999975
No 180
>2ehe_A Four and A half LIM domains 3; FHL-3, skeletal muscle LIM- protein 2, SLIM 2, FHL3, SLIM2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.06 E-value=80 Score=20.87 Aligned_cols=44 Identities=25% Similarity=0.599 Sum_probs=26.1
Q ss_pred ee-eeCCCCC--CCceecCCCCCCCcceecccCC-------CCcc----CCCceeCcCCcccc
Q 025899 192 YC-VCNQVSY--GEMVACDNPNCKIEWFHFGCVG-------LKEQ----PKGKWYCPDCAALK 240 (246)
Q Consensus 192 ~C-~C~~~~~--g~mi~Cd~~~C~~~wfH~~Cv~-------l~~~----~~~~w~C~~C~~~~ 240 (246)
.| .|+++-. +.+|.-.+ .-||..|.. |... ..+..||..|....
T Consensus 17 ~C~~C~~~I~~~~~~~~a~~-----~~~H~~CF~C~~C~~~L~~~~f~~~~~~~~C~~c~~~~ 74 (82)
T 2ehe_A 17 TCAECQQLIGHDSRELFYED-----RHFHEGCFRCCRCQRSLADEPFTCQDSELLCNDCYCSA 74 (82)
T ss_dssp BCTTTCCBCCSSCCBCCCSS-----CCCBTTTSBCTTTCCBCSSCCEEEETTEEEETTTSSCC
T ss_pred cCccCCCccccCcEEEEeCC-----ccccccCCeecCCCCccCCCccEeeCCEEECHHHHhhh
Confidence 56 7877755 44555444 235877744 3322 25778999987543
No 181
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=24.00 E-value=11 Score=27.73 Aligned_cols=45 Identities=16% Similarity=0.456 Sum_probs=26.8
Q ss_pred cee-eeCCCCCCCceecCCCCCCCcceecccCCCCccCCCceeCcCCccccc
Q 025899 191 TYC-VCNQVSYGEMVACDNPNCKIEWFHFGCVGLKEQPKGKWYCPDCAALKN 241 (246)
Q Consensus 191 ~~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cv~l~~~~~~~w~C~~C~~~~~ 241 (246)
..| +|.......++. . |. .-||..|+.---. .+...||.|+..-.
T Consensus 53 ~~C~IC~~~~~~p~~~--~--Cg-H~fC~~Ci~~~~~-~~~~~CP~Cr~~~~ 98 (124)
T 3fl2_A 53 FQCICCQELVFRPITT--V--CQ-HNVCKDCLDRSFR-AQVFSCPACRYDLG 98 (124)
T ss_dssp TBCTTTSSBCSSEEEC--T--TS-CEEEHHHHHHHHH-TTCCBCTTTCCBCC
T ss_pred CCCCcCChHHcCcEEe--e--CC-CcccHHHHHHHHh-HCcCCCCCCCccCC
Confidence 456 898664432222 3 55 5688899752111 24568999987653
No 182
>2d9g_A YY1-associated factor 2; ZF-ranbp domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.85 E-value=38 Score=21.53 Aligned_cols=15 Identities=27% Similarity=0.729 Sum_probs=10.7
Q ss_pred cCCCceeCcCCcccc
Q 025899 226 QPKGKWYCPDCAALK 240 (246)
Q Consensus 226 ~~~~~w~C~~C~~~~ 240 (246)
.+.+.|.|+.|.-.+
T Consensus 7 ~~~~~W~C~~CT~~N 21 (53)
T 2d9g_A 7 GDEGYWDCSVCTFRN 21 (53)
T ss_dssp SCCCCEECSSSCCEE
T ss_pred CCCCCcCCCCCccCC
Confidence 345789999996544
No 183
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=23.52 E-value=19 Score=25.69 Aligned_cols=45 Identities=20% Similarity=0.396 Sum_probs=27.1
Q ss_pred Ccee-eeCCCCCCCceecCCCCCCCcceecccCCCCccCCCceeCcCCcccc
Q 025899 190 PTYC-VCNQVSYGEMVACDNPNCKIEWFHFGCVGLKEQPKGKWYCPDCAALK 240 (246)
Q Consensus 190 ~~~C-~C~~~~~g~mi~Cd~~~C~~~wfH~~Cv~l~~~~~~~w~C~~C~~~~ 240 (246)
...| +|...... .+.... |. ..||..|+.---. ....||.|+..-
T Consensus 15 ~~~C~IC~~~~~~-p~~~~~--Cg-H~fC~~Ci~~~~~--~~~~CP~Cr~~~ 60 (108)
T 2ckl_A 15 HLMCVLCGGYFID-ATTIIE--CL-HSFCKTCIVRYLE--TSKYCPICDVQV 60 (108)
T ss_dssp GTBCTTTSSBCSS-EEEETT--TC-CEEEHHHHHHHHT--SCSBCTTTCCBS
T ss_pred cCCCccCChHHhC-cCEeCC--CC-ChhhHHHHHHHHH--hCCcCcCCCccc
Confidence 4567 99766433 333334 55 6799999851111 126799998654
No 184
>1x4l_A Skeletal muscle LIM-protein 3; LIM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=22.92 E-value=44 Score=21.62 Aligned_cols=44 Identities=23% Similarity=0.601 Sum_probs=25.8
Q ss_pred cee-eeCCCCCC----CceecCCCCCCCcceecccCC-------CCcc----CCCceeCcCCccc
Q 025899 191 TYC-VCNQVSYG----EMVACDNPNCKIEWFHFGCVG-------LKEQ----PKGKWYCPDCAAL 239 (246)
Q Consensus 191 ~~C-~C~~~~~g----~mi~Cd~~~C~~~wfH~~Cv~-------l~~~----~~~~w~C~~C~~~ 239 (246)
..| .|+++-++ .+|.-.+ .-||..|.. |... ..+..||..|...
T Consensus 6 ~~C~~C~~~I~~~~~~~~~~a~~-----~~wH~~CF~C~~C~~~L~~~~f~~~~g~~yC~~c~~~ 65 (72)
T 1x4l_A 6 SGCAGCTNPISGLGGTKYISFEE-----RQWHNDCFNCKKCSLSLVGRGFLTERDDILCPDCGKD 65 (72)
T ss_dssp CSBTTTTBCCCCSSSCSCEECSS-----CEECTTTCBCSSSCCBCTTSCCEECSSSEECHHHHHT
T ss_pred CCCcCCCccccCCCCcceEEECC-----cccCcccCEeccCCCcCCCCccEeECCEEEChhHcCc
Confidence 356 88877554 4555444 335876644 2221 3578888888643
No 185
>1v9x_A Poly (ADP-ribose) polymerase; PARP, DNA repair, inflammation, cell death, structural genomics; NMR {Arabidopsis thaliana}
Probab=22.70 E-value=13 Score=27.68 Aligned_cols=9 Identities=33% Similarity=0.866 Sum_probs=8.1
Q ss_pred cceecccCC
Q 025899 214 EWFHFGCVG 222 (246)
Q Consensus 214 ~wfH~~Cv~ 222 (246)
.|||+.|+.
T Consensus 52 ~W~H~~Cf~ 60 (114)
T 1v9x_A 52 MWNHASCIL 60 (114)
T ss_dssp EEEEHHHHH
T ss_pred eeECccccc
Confidence 899999975
No 186
>2qyw_A Vesicle transport through interaction with T-SNAR homolog; HABC domain, protein transport, endocytosis; 2.00A {Mus musculus} PDB: 2v8s_V
Probab=22.61 E-value=2.1e+02 Score=20.29 Aligned_cols=21 Identities=10% Similarity=0.265 Sum_probs=12.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 025899 95 DLVDTHIQQLDQYLKNFDEEL 115 (246)
Q Consensus 95 dlVd~hirrLD~dl~kfe~eL 115 (246)
--+...+|..-.+|.+|..++
T Consensus 81 ~~~~~klr~Yk~dL~~lk~el 101 (102)
T 2qyw_A 81 NPMMSKLRNYRKDLAKLHREV 101 (102)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhc
Confidence 344456666666776666554
No 187
>2egq_A FHL1 protein; LIM domain, four and A half LIM domains protein 1, skeletal muscle LIM- protein 1, SLIM 1, structural genomics NPPSFA; NMR {Homo sapiens}
Probab=21.82 E-value=37 Score=22.29 Aligned_cols=27 Identities=26% Similarity=0.497 Sum_probs=16.7
Q ss_pred cee-eeCCCCCC-----CceecCCCCCCCcceecccCC
Q 025899 191 TYC-VCNQVSYG-----EMVACDNPNCKIEWFHFGCVG 222 (246)
Q Consensus 191 ~~C-~C~~~~~g-----~mi~Cd~~~C~~~wfH~~Cv~ 222 (246)
..| .|+++-.+ ..|.-.+ ..||..|..
T Consensus 16 ~~C~~C~~~I~~~g~~~~~~~a~~-----~~~H~~CF~ 48 (77)
T 2egq_A 16 KKCAGCKNPITGFGKGSSVVAYEG-----QSWHDYCFH 48 (77)
T ss_dssp CCCSSSCCCCCCCSSCCCEEEETT-----EEEETTTCB
T ss_pred ccCcccCCcccCCCCCceeEEECc-----ceeCcccCE
Confidence 356 78877554 5555554 456887744
No 188
>2db6_A SH3 and cysteine rich domain 3; STAC3, C1 domain, cystein-rich domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.71 E-value=25 Score=23.66 Aligned_cols=33 Identities=30% Similarity=0.676 Sum_probs=26.0
Q ss_pred CCcee-eeCCCCCC---CceecCCCCCCCcceecccCCCC
Q 025899 189 EPTYC-VCNQVSYG---EMVACDNPNCKIEWFHFGCVGLK 224 (246)
Q Consensus 189 ~~~~C-~C~~~~~g---~mi~Cd~~~C~~~wfH~~Cv~l~ 224 (246)
.+++| +|+..-+| +-+.|.. |. --+|-.|+...
T Consensus 27 ~pt~C~~C~~~lwGl~kqG~~C~~--C~-~~~Hk~C~~~v 63 (74)
T 2db6_A 27 KPKFCDVCARMIVLNNKFGLRCKN--CK-TNIHEHCQSYV 63 (74)
T ss_dssp SCEECSSSCCEECHHHHEEEEESS--SC-CEECTTTTGGG
T ss_pred CCcCchhcChhhccccCCccccCC--CC-CccChhHHhhC
Confidence 47899 99988776 5688999 77 56999998743
No 189
>2cs3_A Protein C14ORF4, MY039 protein; ZF-C3HC4 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.3
Probab=21.39 E-value=40 Score=23.62 Aligned_cols=47 Identities=28% Similarity=0.697 Sum_probs=29.3
Q ss_pred CCCCcee-eeCCC-CCCCceecCCCCCCCcceecccCC--CCc-cCCCceeCcC
Q 025899 187 PNEPTYC-VCNQV-SYGEMVACDNPNCKIEWFHFGCVG--LKE-QPKGKWYCPD 235 (246)
Q Consensus 187 ~~~~~~C-~C~~~-~~g~mi~Cd~~~C~~~wfH~~Cv~--l~~-~~~~~w~C~~ 235 (246)
++..+.| +|+.- ....+|+|-. -+..-|-|.|.. +.. -+...-|||.
T Consensus 12 ~~a~l~CtlC~erLEdtHFVQCPs--v~~HkFCFpCsr~sIk~q~~~~EvyCPS 63 (93)
T 2cs3_A 12 NSGPLCCTICHERLEDTHFVQCPS--VPSHKFCFPCSRESIKAQGATGEVYCPS 63 (93)
T ss_dssp SCCSCCCSSSCSCCSSTTSEECSS--CSSCEECHHHHHHHHHHHHSSSCCCCTT
T ss_pred CCCeeEeecchhhhccCceeeCCC--ccCCeeeccccHHHHHhcCCCCcEECCC
Confidence 3456788 99865 4567899876 332335566644 222 2467889984
No 190
>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1
Probab=21.35 E-value=39 Score=20.84 Aligned_cols=12 Identities=33% Similarity=1.107 Sum_probs=9.7
Q ss_pred CCceeCcCCccc
Q 025899 228 KGKWYCPDCAAL 239 (246)
Q Consensus 228 ~~~w~C~~C~~~ 239 (246)
..+|.||.|-..
T Consensus 28 P~dw~CP~Cg~~ 39 (46)
T 6rxn_A 28 PDDWCCPVCGVS 39 (46)
T ss_dssp CTTCBCTTTCCB
T ss_pred CCCCcCcCCCCc
Confidence 567999999754
No 191
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=21.34 E-value=4.5e+02 Score=30.38 Aligned_cols=114 Identities=15% Similarity=0.136 Sum_probs=0.0
Q ss_pred HHHHHHHhhcccHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHhhhCCCCCCchhhHHHHHHHHHHHHHH-
Q 025899 4 LDEFQANLESLPNILQKKYALLRDLDKSLQEIQRQN--EQRCEQEIEDLMREIRAGNITPNTSLIRFSDDALDEQKHSI- 80 (246)
Q Consensus 4 Le~fle~l~~LP~El~r~l~~IreLD~~~~~~~~~~--~~~~~~~l~~~~k~~~~gs~~~~~~~~~l~~~I~~~~~~~~- 80 (246)
|.+--+.|+.|-.+|...-.++.+....+.+++.++ ++......+......+..........+...+++++++.+|.
T Consensus 1929 L~et~~~V~~l~~~L~~~~~~L~~k~~ea~~~l~~i~~~~~~ae~~k~~v~~~~~~~~~~~~ei~~~k~~~e~dL~~A~P 2008 (3245)
T 3vkg_A 1929 LRDTEAQVKDLQVSLAQKNRELDVKNEQANQKLKQMVQDQQAAEIKQKDARELQVQLDVRNKEIAVQKVKAYADLEKAEP 2008 (3245)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Q ss_pred --------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 025899 81 --------RIADEKVALAVQAYDLVDTHIQQLDQYLKNFDEELRR 117 (246)
Q Consensus 81 --------~l~dEKv~LA~q~~dlVd~hirrLD~dl~kfe~eL~~ 117 (246)
..+.+....|+.-+.-+...+..|+..|+.+.+++..
T Consensus 2009 a~Pkr~~l~~ae~~l~~~~~~L~~~~~~L~~le~~l~~L~~~~~~ 2053 (3245)
T 3vkg_A 2009 TGPLREEVEQLENAANELKLKQDEIVATITALEKSIATYKEEYAT 2053 (3245)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 192
>3umh_A Amyloid beta A4 protein; metal binding site, metal binding, cell surface, secretory P metal binding protein; 2.00A {Homo sapiens} SCOP: a.47.4.1 PDB: 3umi_A 3umk_A 1rw6_A 3nyl_A 3nyj_A 1tkn_A
Probab=21.28 E-value=3.4e+02 Score=22.19 Aligned_cols=107 Identities=16% Similarity=0.172 Sum_probs=50.7
Q ss_pred HHHHHHHhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCchhhHHHHHHHH-------HH
Q 025899 4 LDEFQANLESLPNILQKKYALLRDLDKSLQEIQRQNEQRCEQEIEDLMREIRAGNITPNTSLIRFSDDALD-------EQ 76 (246)
Q Consensus 4 Le~fle~l~~LP~El~r~l~~IreLD~~~~~~~~~~~~~~~~~l~~~~k~~~~gs~~~~~~~~~l~~~I~~-------~~ 76 (246)
.+.|-.+|..|+.|..-.=..+ .+...+.+..-+..+....+..+..++..+...++.....+..-|.. .+
T Consensus 64 ~~rFQ~~v~aLE~E~~~ErqqL--~etH~qRV~a~ln~rrr~Ale~y~~ALq~~pp~~~~il~aLk~yirae~KDR~Hti 141 (211)
T 3umh_A 64 IQHFQEKVESLEQEAANERQQL--VETHMARVEAMLNDRRRLALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTL 141 (211)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhhHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHhHH
Confidence 3456666666666655422222 22233344444455555566667666544332221122222211111 11
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 025899 77 KHSIRIADEKVALAVQAYDLVDTHIQQLDQYLKNFD 112 (246)
Q Consensus 77 ~~~~~l~dEKv~LA~q~~dlVd~hirrLD~dl~kfe 112 (246)
.+...+..=--.-|.++-..|-.|++-+|.-+..--
T Consensus 142 ~hy~Hv~~~dpe~A~~~k~~v~~hL~~id~r~NqsL 177 (211)
T 3umh_A 142 KHFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQSL 177 (211)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHhcchHHHHHHHHHHHHHhHhH
Confidence 122222222233466777788888888877665444
No 193
>4rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.20A {Clostridium pasteurianum} SCOP: g.41.5.1 PDB: 5rxn_A 1bfy_A 1fhh_A 1fhm_A 1irn_A 1iro_A 1r0f_A 1r0g_A 1r0h_A 1r0i_A 1r0j_A 1t9q_A 1c09_A 1b2j_A 1b13_A 1smm_A 1smu_A 1smw_A 1be7_A 1t9o_A ...
Probab=20.68 E-value=41 Score=21.53 Aligned_cols=12 Identities=33% Similarity=0.996 Sum_probs=9.9
Q ss_pred CCceeCcCCccc
Q 025899 228 KGKWYCPDCAAL 239 (246)
Q Consensus 228 ~~~w~C~~C~~~ 239 (246)
..+|.||.|-..
T Consensus 34 P~dw~CP~Cg~~ 45 (54)
T 4rxn_A 34 PDDWVCPLCGVG 45 (54)
T ss_dssp CTTCBCTTTCCB
T ss_pred CCCCcCcCCCCc
Confidence 578999999764
No 194
>3a9j_C Mitogen-activated protein kinase kinase kinase 7- interacting protein 2; protein complex, cytoplasm, isopeptide bond, metal-binding, zinc; 1.18A {Mus musculus} PDB: 2wwz_C 2wx0_C 2wx1_C 3a9k_C
Probab=20.51 E-value=48 Score=18.66 Aligned_cols=14 Identities=29% Similarity=0.885 Sum_probs=9.9
Q ss_pred CCCceeCcCCcccc
Q 025899 227 PKGKWYCPDCAALK 240 (246)
Q Consensus 227 ~~~~w~C~~C~~~~ 240 (246)
+...|.|+.|.-.+
T Consensus 5 ~~~~W~C~~CT~~N 18 (34)
T 3a9j_C 5 MGAQWNCTACTFLN 18 (34)
T ss_dssp CCCCEECTTTCCEE
T ss_pred CCCcCCCCCCcccc
Confidence 34579999997443
No 195
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=20.41 E-value=6.9e+02 Score=25.40 Aligned_cols=21 Identities=10% Similarity=0.166 Sum_probs=11.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 025899 77 KHSIRIADEKVALAVQAYDLV 97 (246)
Q Consensus 77 ~~~~~l~dEKv~LA~q~~dlV 97 (246)
.++..|..|+-.|-+++-+|-
T Consensus 1023 ~kv~~L~~e~~~L~qq~~~l~ 1043 (1080)
T 2dfs_A 1023 QLVSELKEQNTLLKTEKEELN 1043 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 444555666655555555544
No 196
>1y8f_A UNC-13 homolog A, MUNC13-1; cysteine-rich domain, C1-domain, zinc-binding domain, endocytosis/exocytosis,signaling protein complex; NMR {Rattus norvegicus}
Probab=20.22 E-value=31 Score=22.54 Aligned_cols=32 Identities=34% Similarity=0.834 Sum_probs=24.8
Q ss_pred CCcee-eeCCCCCC---CceecCCCCCCCcceecccCCC
Q 025899 189 EPTYC-VCNQVSYG---EMVACDNPNCKIEWFHFGCVGL 223 (246)
Q Consensus 189 ~~~~C-~C~~~~~g---~mi~Cd~~~C~~~wfH~~Cv~l 223 (246)
.+++| +|+..-+| +-+.|.. |. --.|-.|+..
T Consensus 23 ~pt~C~~C~~~l~Gl~~qg~~C~~--C~-~~~Hk~C~~~ 58 (66)
T 1y8f_A 23 TPTYCYECEGLLWGIARQGMRCTE--CG-VKCHEKCQDL 58 (66)
T ss_dssp SCCCCTTTCCCCCSSCCEEEEETT--TC-CEECTTHHHH
T ss_pred CCcChhhcChhhcccCcceeEcCC--CC-CeeCHHHHhh
Confidence 47899 99988776 4578998 77 5589999764
Done!