BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>025905
MEQPSSPGRSPFDYTKCIEEALKFILESHINQTLELDLGLSKDLCSFLLTHNVPLTAGSS
DTESQYPLYKRLASVFHESVTSTASCGAFSNIASLNEDDDLKKREDWGKLVLKEGSEMIE
LLKTVNFELHVQEPYFTQLKDGLKTVEGRCAVGDYNRIGSGSLILCNKCLVLKVQDVHGY
LSFSEMLQAESLAKVLPGIKTIDEGVQVYRRFYTEEKEKTNGVIAICVTKPAAQPFLCLA
RILSVN

High Scoring Gene Products

Symbol, full name Information P value
AT3G03320 protein from Arabidopsis thaliana 4.1e-49
AT2G43465 protein from Arabidopsis thaliana 1.3e-43

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  025905
        (246 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2099699 - symbol:AT3G03320 "AT3G03320" species...   512  4.1e-49   1
TAIR|locus:5019474741 - symbol:AT2G43465 "AT2G43465" spec...   460  1.3e-43   1


>TAIR|locus:2099699 [details] [associations]
            symbol:AT3G03320 "AT3G03320" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002686 InterPro:IPR015947
            SUPFAM:SSF88697 EMBL:AC009895 InterPro:IPR007374 Pfam:PF04266
            SMART:SM01022 UniGene:At.41001 UniGene:At.43920 EMBL:AY140013
            EMBL:BT009658 IPI:IPI00541051 RefSeq:NP_566202.1
            ProteinModelPortal:Q9SRN6 SMR:Q9SRN6 PRIDE:Q9SRN6
            EnsemblPlants:AT3G03320.1 GeneID:821284 KEGG:ath:AT3G03320
            TAIR:At3g03320 OMA:TVEGRCA PhylomeDB:Q9SRN6 ProtClustDB:CLSN2917081
            ArrayExpress:Q9SRN6 Genevestigator:Q9SRN6 Uniprot:Q9SRN6
        Length = 244

 Score = 512 (185.3 bits), Expect = 4.1e-49, P = 4.1e-49
 Identities = 119/232 (51%), Positives = 152/232 (65%)

Query:    15 TKCIEEALKFILESHINQTLELDLGLSKDLCSFLLTHN--VPLTAGSSDTESQYPLYKRL 72
             TK ++  L+  +ES +  +L   L  S       LT +  + L   ++D+  +  +YK L
Sbjct:     9 TKSVD--LRECMESLLRFSLRSHLNESVPSFDLDLTRDFCLHLLGEATDSTEKSAVYKLL 66

Query:    73 ASVFHESVTSTASCGAFSNIASLNEDDDLKKREDWGKLVLKEGSEMIELLKTVNFELHVQ 132
             A       T+ + C     +AS  E D     E + KL+   G ++I +LK VNFELHVQ
Sbjct:    67 A-------TALSEC-----LAS--EGDKNSNLEKYSKLIHGLGYDLINMLKEVNFELHVQ 112

Query:   133 EPYFTQLKDGLKTVEGRCAVGDYNRIGSGSLILCNKCLVLKVQDVHGYLSFSEMLQAESL 192
             EPYFTQLKDGLKTVEGRCAVGDY RI SG  +L NKCL+L+VQDVH Y SFSEML+ E L
Sbjct:   113 EPYFTQLKDGLKTVEGRCAVGDYMRISSGDFLLFNKCLLLEVQDVHRYTSFSEMLKVEGL 172

Query:   193 AKVLPGIKTIDEGVQVYRRFYTEEKEKTNGVIAICVTKPAAQPFLCLARILS 244
             AKVLPG+++I+EGVQVYR FY+EEKE+ NGV+AI V KPA QP   LA +LS
Sbjct:   173 AKVLPGVESIEEGVQVYRNFYSEEKERMNGVVAIRVAKPANQPSAALAGVLS 224

 Score = 130 (50.8 bits), Expect = 1.7e-06, P = 1.7e-06
 Identities = 30/83 (36%), Positives = 46/83 (55%)

Query:     1 MEQPSSPGRSPFDYTKCIEEALKFILESHINQTL-ELDLGLSKDLCSFLLTHNVPLTAGS 59
             MEQP SPG    D  +C+E  L+F L SH+N+++   DL L++D C  LL         +
Sbjct:     1 MEQPMSPGTKSVDLRECMESLLRFSLRSHLNESVPSFDLDLTRDFCLHLLGE-------A 53

Query:    60 SDTESQYPLYKRLASVFHESVTS 82
             +D+  +  +YK LA+   E + S
Sbjct:    54 TDSTEKSAVYKLLATALSECLAS 76


>TAIR|locus:5019474741 [details] [associations]
            symbol:AT2G43465 "AT2G43465" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002685 InterPro:IPR015947 SUPFAM:SSF88697
            InterPro:IPR007374 Pfam:PF04266 SMART:SM01022 IPI:IPI00527995
            RefSeq:NP_001154572.1 UniGene:At.74539 ProteinModelPortal:F4IR54
            SMR:F4IR54 PRIDE:F4IR54 EnsemblPlants:AT2G43465.1 GeneID:7922418
            KEGG:ath:AT2G43465 OMA:PYMEDGH Uniprot:F4IR54
        Length = 388

 Score = 460 (167.0 bits), Expect = 1.3e-43, P = 1.3e-43
 Identities = 104/242 (42%), Positives = 149/242 (61%)

Query:    17 CIEEALKFILESHINQTLELDLGLSKDLCSFLLTHNVPLTAGSSDTESQY---------- 66
             C++E +KF L+      +E D+GL+ + CS LL     L  G     S Y          
Sbjct:     7 CLDEMVKFTLD----YCVEFDIGLTGEFCSGLLCGESVLHDGERIESSSYALLHRFSGVP 62

Query:    67 --PLYKRLASVFHESVTSTASCGAFSNIASLNEDDDLKKRED-WGKLVLKEGSEMIELLK 123
               PLYK LA    +S+ S + CG F  I+   E   LK++ED W KL+ ++GSE++  LK
Sbjct:    63 DYPLYKVLALGLLKSIDSGSFCGTFEKISLGKEVIRLKEKEDEWSKLINQKGSELVNALK 122

Query:   124 TVNFELHVQEPYFTQLKDGLKTVEGRCAVGDYNRIG-SGSLILCNKCLVLKVQDVHGYLS 182
              V  EL VQEP F+ +KDG+KTVE RC   +Y+RI   GS+++ NKCL+ +V ++H Y S
Sbjct:   123 DVFSELQVQEPLFSLMKDGIKTVEARCFEEEYDRIRRGGSMVMINKCLMFEVLELHQYAS 182

Query:   183 FSEMLQAESLAKVLPGIKTIDEGVQVYRRFYTEEKEKTNGVIAICVTKPAAQPFLCLARI 242
             F E+L+AES  KV PG KT++EG+Q++R+ Y  ++E  NGV+AI ++K  AQP + LA I
Sbjct:   183 FYELLKAESSEKVFPGTKTVEEGMQMFRKLYDTDQENFNGVVAIHLSKSVAQPCVALAHI 242

Query:   243 LS 244
             LS
Sbjct:   243 LS 244


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.134   0.388    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      246       246    0.0010  113 3  11 22  0.45    33
                                                     32  0.46    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  605 (64 KB)
  Total size of DFA:  184 KB (2106 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  23.09u 0.08s 23.17t   Elapsed:  00:00:02
  Total cpu time:  23.09u 0.08s 23.17t   Elapsed:  00:00:02
  Start:  Sat May 11 08:06:46 2013   End:  Sat May 11 08:06:48 2013

Back to top