Query 025906
Match_columns 246
No_of_seqs 191 out of 974
Neff 5.8
Searched_HMMs 46136
Date Fri Mar 29 10:54:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025906.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/025906hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02190 cellulose synthase-li 100.0 1.3E-54 2.8E-59 431.1 19.2 228 7-246 2-237 (756)
2 PLN02195 cellulose synthase A 100.0 3E-54 6.5E-59 436.3 18.2 229 11-246 155-403 (977)
3 PLN02915 cellulose synthase A 100.0 3.8E-54 8.3E-59 437.5 18.7 228 12-246 191-438 (1044)
4 PLN02400 cellulose synthase 100.0 4.3E-54 9.4E-59 438.3 18.5 228 12-246 260-507 (1085)
5 PLN02189 cellulose synthase 100.0 7.9E-54 1.7E-58 435.2 16.9 230 10-246 233-482 (1040)
6 PLN02436 cellulose synthase A 100.0 1.1E-53 2.4E-58 434.3 17.8 228 12-246 269-516 (1094)
7 PLN02638 cellulose synthase A 100.0 1.1E-53 2.5E-58 435.1 17.6 229 11-246 252-500 (1079)
8 PLN02893 Cellulose synthase-li 100.0 2.4E-53 5.1E-58 423.0 17.2 226 7-246 5-248 (734)
9 PLN02248 cellulose synthase-li 100.0 5.7E-53 1.2E-57 430.1 19.2 207 12-224 266-485 (1135)
10 PF03552 Cellulose_synt: Cellu 100.0 2.9E-37 6.3E-42 306.5 10.0 138 108-246 1-150 (720)
11 TIGR03030 CelA cellulose synth 100.0 1.5E-29 3.3E-34 254.7 17.4 185 29-225 56-254 (713)
12 PRK11498 bcsA cellulose syntha 100.0 2.1E-28 4.5E-33 249.6 16.2 169 29-224 185-364 (852)
13 PRK05454 glucosyltransferase M 99.7 1.2E-16 2.6E-21 161.0 17.3 186 28-225 40-246 (691)
14 COG1215 Glycosyltransferases, 99.5 5.7E-14 1.2E-18 131.3 10.9 102 105-227 53-165 (439)
15 TIGR03111 glyc2_xrt_Gpos1 puta 99.5 7.2E-14 1.6E-18 133.6 11.6 131 69-225 18-157 (439)
16 PRK14583 hmsR N-glycosyltransf 99.4 1.3E-12 2.7E-17 125.1 11.9 100 102-224 71-180 (444)
17 cd04191 Glucan_BSP_ModH Glucan 99.4 7.6E-13 1.7E-17 118.7 6.8 106 108-225 1-121 (254)
18 PRK11204 N-glycosyltransferase 99.4 5.1E-12 1.1E-16 118.9 11.9 100 102-224 50-159 (420)
19 cd06421 CESA_CelA_like CESA_Ce 99.3 6E-12 1.3E-16 107.1 7.0 101 106-225 1-110 (234)
20 TIGR03472 HpnI hopanoid biosyn 99.2 5E-11 1.1E-15 111.6 10.7 102 103-226 38-153 (373)
21 cd06437 CESA_CaSu_A2 Cellulose 99.2 3.7E-11 7.9E-16 103.5 7.9 104 106-225 1-113 (232)
22 cd06439 CESA_like_1 CESA_like_ 99.1 8.3E-11 1.8E-15 101.9 5.1 102 102-225 25-135 (251)
23 TIGR03469 HonB hopene-associat 99.1 1.6E-09 3.5E-14 101.9 12.0 55 102-161 36-90 (384)
24 cd06435 CESA_NdvC_like NdvC_li 99.0 1.7E-09 3.6E-14 92.8 8.2 99 109-225 1-110 (236)
25 cd06427 CESA_like_2 CESA_like_ 99.0 1.2E-09 2.7E-14 95.0 6.8 101 106-225 1-110 (241)
26 PRK14716 bacteriophage N4 adso 98.9 6.9E-09 1.5E-13 101.8 12.3 101 103-224 63-183 (504)
27 cd02520 Glucosylceramide_synth 98.9 3.9E-09 8.4E-14 89.1 6.6 97 106-224 1-111 (196)
28 PRK11234 nfrB bacteriophage N4 98.8 1.2E-08 2.5E-13 104.1 9.4 84 102-206 59-144 (727)
29 cd06438 EpsO_like EpsO protein 98.8 1E-08 2.3E-13 85.4 6.3 93 110-226 1-108 (183)
30 COG2943 MdoH Membrane glycosyl 98.8 5.2E-07 1.1E-11 88.5 18.1 184 27-225 62-266 (736)
31 cd04195 GT2_AmsE_like GT2_AmsE 98.7 3.6E-08 7.7E-13 82.3 5.9 96 109-224 1-105 (201)
32 PF13641 Glyco_tranf_2_3: Glyc 98.7 2.2E-09 4.8E-14 91.5 -1.5 97 106-224 1-111 (228)
33 cd04192 GT_2_like_e Subfamily 98.7 2.9E-08 6.4E-13 83.7 5.1 97 110-224 1-107 (229)
34 PTZ00260 dolichyl-phosphate be 98.6 2.7E-07 5.8E-12 85.8 11.4 83 103-206 67-160 (333)
35 cd04196 GT_2_like_d Subfamily 98.6 7.7E-08 1.7E-12 80.3 6.8 94 109-223 1-103 (214)
36 cd04184 GT2_RfbC_Mx_like Myxoc 98.6 1.5E-07 3.3E-12 78.4 8.0 98 106-224 1-108 (202)
37 cd04190 Chitin_synth_C C-termi 98.5 7E-08 1.5E-12 84.9 3.2 41 110-153 1-49 (244)
38 cd02525 Succinoglycan_BP_ExoA 98.5 3.4E-07 7.3E-12 78.2 7.0 96 107-224 1-106 (249)
39 PRK10063 putative glycosyl tra 98.5 2.2E-07 4.8E-12 82.7 5.7 79 106-206 1-80 (248)
40 PRK10073 putative glycosyl tra 98.4 3.8E-07 8.2E-12 84.5 6.9 78 105-206 5-83 (328)
41 COG0463 WcaA Glycosyltransfera 98.4 3.5E-07 7.5E-12 70.9 5.4 52 105-162 2-53 (291)
42 PF00535 Glycos_transf_2: Glyc 98.4 7.8E-08 1.7E-12 75.9 1.2 76 109-206 1-76 (169)
43 cd06434 GT2_HAS Hyaluronan syn 98.4 3.9E-07 8.5E-12 77.8 5.5 94 107-225 1-103 (235)
44 PLN02726 dolichyl-phosphate be 98.4 6.1E-07 1.3E-11 78.4 6.3 85 104-206 7-91 (243)
45 cd06420 GT2_Chondriotin_Pol_N 98.4 4.4E-07 9.6E-12 74.3 5.0 95 110-224 1-104 (182)
46 cd06436 GlcNAc-1-P_transferase 98.4 4E-07 8.7E-12 76.8 4.4 94 110-226 1-116 (191)
47 cd06433 GT_2_WfgS_like WfgS an 98.3 1.1E-06 2.5E-11 71.9 6.4 73 109-206 1-73 (202)
48 PRK10018 putative glycosyl tra 98.3 1.4E-06 3E-11 79.4 6.6 80 104-205 3-82 (279)
49 PRK13915 putative glucosyl-3-p 98.2 1.9E-06 4E-11 79.4 6.4 54 103-160 28-81 (306)
50 cd04185 GT_2_like_b Subfamily 98.2 1.8E-06 3.9E-11 72.3 5.7 93 110-225 1-105 (202)
51 PRK15489 nfrB bacteriophage N4 98.2 8.1E-06 1.7E-10 83.2 11.3 80 102-206 67-152 (703)
52 cd04188 DPG_synthase DPG_synth 98.2 1.7E-06 3.8E-11 73.3 5.0 78 110-206 1-80 (211)
53 cd04179 DPM_DPG-synthase_like 98.2 3.7E-06 8E-11 68.9 5.9 77 110-206 1-77 (185)
54 cd06423 CESA_like CESA_like is 98.1 4.5E-06 9.8E-11 65.5 5.8 88 110-220 1-99 (180)
55 cd06913 beta3GnTL1_like Beta 1 98.1 5.3E-06 1.2E-10 70.7 6.5 47 110-161 1-47 (219)
56 cd06442 DPM1_like DPM1_like re 98.1 5.6E-06 1.2E-10 70.0 5.8 75 110-206 1-76 (224)
57 cd02510 pp-GalNAc-T pp-GalNAc- 98.1 6.3E-06 1.4E-10 74.3 6.3 79 109-206 1-81 (299)
58 cd02511 Beta4Glucosyltransfera 98.1 6.3E-06 1.4E-10 71.6 5.9 87 107-224 1-96 (229)
59 cd02522 GT_2_like_a GT_2_like_ 98.0 1.2E-05 2.7E-10 67.7 5.6 85 108-221 1-94 (221)
60 PRK10714 undecaprenyl phosphat 98.0 1.6E-05 3.5E-10 73.7 6.7 54 105-162 5-59 (325)
61 cd04186 GT_2_like_c Subfamily 97.9 1.5E-05 3.2E-10 63.4 5.1 72 110-206 1-72 (166)
62 cd04187 DPM1_like_bac Bacteria 97.9 2.1E-05 4.6E-10 64.8 4.9 76 110-206 1-78 (181)
63 cd00761 Glyco_tranf_GTA_type G 97.5 0.00026 5.6E-09 54.1 6.1 74 110-206 1-75 (156)
64 cd02526 GT2_RfbF_like RfbF is 97.4 0.00031 6.6E-09 59.9 5.4 84 110-220 1-96 (237)
65 COG1216 Predicted glycosyltran 96.5 0.0075 1.6E-07 54.9 6.8 72 105-199 2-73 (305)
66 KOG2977 Glycosyltransferase [G 96.4 0.0084 1.8E-07 55.4 6.7 62 107-179 68-132 (323)
67 KOG2978 Dolichol-phosphate man 96.0 0.007 1.5E-07 53.2 3.5 53 106-161 3-55 (238)
68 PF03142 Chitin_synth_2: Chiti 95.8 0.022 4.7E-07 56.8 6.6 45 104-151 23-67 (527)
69 cd02514 GT13_GLCNAC-TI GT13_GL 95.8 0.029 6.2E-07 52.9 7.1 42 108-153 2-43 (334)
70 PF10111 Glyco_tranf_2_2: Glyc 95.2 0.032 6.9E-07 50.3 5.2 96 109-222 1-111 (281)
71 PLN02893 Cellulose synthase-li 94.6 0.02 4.3E-07 58.9 2.4 58 182-239 264-349 (734)
72 TIGR01556 rhamnosyltran L-rham 93.8 0.092 2E-06 46.6 4.6 66 114-205 2-67 (281)
73 KOG3738 Predicted polypeptide 93.6 0.1 2.2E-06 50.6 4.8 49 103-154 121-169 (559)
74 PLN02189 cellulose synthase 92.6 0.16 3.5E-06 54.1 4.9 56 184-239 500-583 (1040)
75 PF13704 Glyco_tranf_2_4: Glyc 91.9 0.31 6.7E-06 36.5 4.5 36 120-160 3-38 (97)
76 PLN02195 cellulose synthase A 88.2 0.33 7.2E-06 51.5 2.6 59 181-239 418-504 (977)
77 KOG3736 Polypeptide N-acetylga 86.2 0.5 1.1E-05 47.7 2.4 49 103-154 139-187 (578)
78 PLN02638 cellulose synthase A 85.1 2 4.3E-05 46.3 6.3 106 125-239 459-601 (1079)
79 KOG3737 Predicted polypeptide 79.9 4.9 0.00011 39.3 6.3 49 102-153 151-199 (603)
80 PF03071 GNT-I: GNT-I family; 77.0 2.6 5.6E-05 41.3 3.6 46 103-153 90-136 (434)
81 KOG2547 Ceramide glucosyltrans 76.4 16 0.00034 35.5 8.5 45 103-153 82-126 (431)
82 PLN02248 cellulose synthase-li 74.1 1.7 3.7E-05 46.9 1.7 58 181-239 584-669 (1135)
83 PF03452 Anp1: Anp1; InterPro 61.6 19 0.00042 33.1 5.6 56 103-162 22-79 (269)
84 COG4097 Predicted ferric reduc 55.2 53 0.0011 32.1 7.5 68 104-190 342-409 (438)
85 PF11712 Vma12: Endoplasmic re 49.8 40 0.00087 27.6 5.2 20 60-79 115-134 (142)
86 PF01644 Chitin_synth_1: Chiti 47.8 40 0.00087 28.8 5.0 37 115-154 2-52 (163)
87 KOG4518 Hydroxypyruvate isomer 43.6 50 0.0011 29.6 5.0 92 106-220 31-130 (264)
88 PRK11509 hydrogenase-1 operon 41.0 42 0.00092 27.6 4.0 47 120-187 52-98 (132)
89 PF11215 DUF3010: Protein of u 39.3 48 0.001 27.7 4.0 55 135-200 25-80 (138)
90 PRK13964 coaD phosphopantethei 35.8 99 0.0021 25.5 5.4 59 110-193 32-92 (140)
91 PF14979 TMEM52: Transmembrane 30.7 2.3E+02 0.0051 24.0 6.8 34 103-140 59-92 (154)
92 PF11248 DUF3046: Protein of u 30.6 32 0.0007 24.9 1.5 14 166-179 47-60 (63)
93 cd06432 GT8_HUGT1_C_like The C 29.0 1.6E+02 0.0035 26.2 6.1 45 123-179 14-58 (248)
94 cd02742 GH20_hexosaminidase Be 28.9 1.4E+02 0.003 27.4 5.8 28 120-149 13-40 (303)
95 PLN02190 cellulose synthase-li 28.3 37 0.00081 35.6 2.0 24 182-205 252-279 (756)
96 PTZ00331 alpha/beta hydrolase; 26.7 2.2E+02 0.0048 24.6 6.4 45 109-162 148-192 (212)
97 COG4226 HicB Predicted nucleas 26.3 1.1E+02 0.0024 24.6 4.0 43 143-185 25-70 (111)
98 cd06431 GT8_LARGE_C LARGE cata 24.8 1.6E+02 0.0035 26.9 5.3 43 107-155 2-44 (280)
99 cd06570 GH20_chitobiase-like_1 23.8 2E+02 0.0042 26.8 5.8 50 121-179 16-83 (311)
100 PF04896 AmoC: Ammonia monooxy 22.9 2.2E+02 0.0047 26.1 5.6 61 31-93 20-88 (251)
101 PF10883 DUF2681: Protein of u 22.4 99 0.0022 23.8 2.9 15 36-50 13-27 (87)
102 KOG1413 N-acetylglucosaminyltr 21.3 2.1E+02 0.0045 27.9 5.4 46 105-155 66-112 (411)
103 PF02009 Rifin_STEVOR: Rifin/s 21.3 85 0.0018 29.3 2.8 9 40-48 273-281 (299)
104 PRK15171 lipopolysaccharide 1, 21.0 3.1E+02 0.0067 25.6 6.6 44 106-153 24-67 (334)
105 PF02042 RWP-RK: RWP-RK domain 21.0 74 0.0016 22.1 1.8 16 169-185 32-47 (52)
106 PLN02436 cellulose synthase A 20.9 40 0.00086 36.8 0.6 25 181-205 531-559 (1094)
107 COG2861 Uncharacterized protei 20.5 79 0.0017 28.9 2.3 32 141-190 149-180 (250)
108 TIGR02584 cas_NE0113 CRISPR-as 20.5 1.5E+02 0.0032 26.5 4.0 70 110-185 1-75 (209)
109 PF03908 Sec20: Sec20; InterP 20.3 99 0.0021 23.3 2.6 15 33-47 76-90 (92)
110 PF00809 Pterin_bind: Pterin b 20.3 5.6E+02 0.012 22.0 7.8 89 106-228 71-161 (210)
111 cd08318 Death_NMPP84 Death dom 20.1 1.6E+02 0.0034 22.0 3.6 30 150-179 1-31 (86)
No 1
>PLN02190 cellulose synthase-like protein
Probab=100.00 E-value=1.3e-54 Score=431.07 Aligned_cols=228 Identities=34% Similarity=0.624 Sum_probs=201.7
Q ss_pred HHhcCCCCCceeeeecccchhHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHh
Q 025906 7 MEKQQNSLPLHVSHVKKSSLIINRSLVLLHFTSLAFLVYYRVSYFFQVSNARAAPLLPWLLVFAAELLLSFQWLLGIAYR 86 (246)
Q Consensus 7 ~~~~~~~~~l~~~~~~~~~~~~~R~~~~~~l~~~~~Yl~wR~~~tl~~~~~~~~~~~~wi~l~~aE~~~~~~~lL~~~~~ 86 (246)
|++..+.+|||++++.+.+ ++|++.++++++++.|+.||+++.++. .+.|+++++||+|++++|+|+++.+
T Consensus 2 ~~~~~~~~pL~~~~~~~~~--~~r~~~~~vl~~~~~~l~~R~~~~~~~-------~~~W~~~~~~E~wf~~~WlL~q~~k 72 (756)
T PLN02190 2 ADSSSSLPPLCERISHKSY--FLRAVDLTILGLLFSLLLYRILHMSEN-------DTVWLVAFLCESCFSFVWLLITCIK 72 (756)
T ss_pred CcccCCCCCceeeeeccch--hHHHHHHHHHHHHHHHHHHHHhCCCcc-------cHHHHHHHHHHHHHHHHHHHhccce
Confidence 3456688999999997655 599999999999999999999987653 2478889999999999999999999
Q ss_pred hcccCCCCCCCCCCc-CCCCCceeEEEeccCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHHHH
Q 025906 87 WRPISRTVFPERLPE-ADQLPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKF 165 (246)
Q Consensus 87 ~~p~~r~~~~~~l~~-~~~~P~Vdv~V~tyNp~~E~~~vv~~Tl~~~~~ldYP~~kl~vyvlDDG~~d~t~~~~~ea~~~ 165 (246)
|+|++|.++|+++.+ -+++|+|||||||+||.+|||.++.+|+++++++|||++|+.|||+|||+++.|++++.||++|
T Consensus 73 w~pv~r~~~p~~l~~r~~~Lp~VDvFV~TaDP~kEPpl~v~nTvLSilA~dYP~eklscYvSDDG~s~LT~~al~EAa~F 152 (756)
T PLN02190 73 WSPAEYKPYPDRLDERVHDLPSVDMFVPTADPVREPPIIVVNTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKF 152 (756)
T ss_pred eeecCCCCCcHHHHHhhccCCcceEEEecCCCCcCCHHHHHHHHHHHHhccCCccccceEEecCCCcHhHHHHHHHHHHH
Confidence 999999999988865 2469999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhchHHHHHHcCCCcCCCccceeCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHhhcc-------CCCCCCCCCCCC
Q 025906 166 ARSWLPFCKRFGIKTICPEAYFSDPENGDGDSGNAEFIVEREKIKEKYTEFKERVTRAIEK-------WGLENEGISRSR 238 (246)
Q Consensus 166 a~~w~~lc~~~gv~~r~p~~Y~~r~~~~~aKaGnln~a~~~~~~~~~y~~f~~ri~~~~~~-------~~~~~~~~~~~~ 238 (246)
|+.|+|||+|+||+||+||+||+.+... + ...+|..||++||++||||++||+++... +..+.+.+++++
T Consensus 153 A~~WvPFCrK~~IepRaPe~YF~~~~~~--~-~~~~f~~e~~~~K~eYee~k~ri~~a~~~~~~~~~~~~~~~~~~~~~~ 229 (756)
T PLN02190 153 AKIWVPFCKKYNVRVRAPFRYFLNPPVA--T-EDSEFSKDWEMTKREYEKLSRKVEDATGDSHWLDAEDDFEAFSNTKPN 229 (756)
T ss_pred HhhhcccccccCCCcCCHHHHhcCCCCC--C-CCchhHHHHHHHHHHHHHHHHHHHhhccCCCCcccCCcccccCCCCCC
Confidence 9999999999999999999999985321 1 22589999999999999999999987421 222334568999
Q ss_pred CCCCcccC
Q 025906 239 DHPSVVEV 246 (246)
Q Consensus 239 ~h~~iv~v 246 (246)
|||+||||
T Consensus 230 dH~~iiqV 237 (756)
T PLN02190 230 DHSTIVKV 237 (756)
T ss_pred CCccceEE
Confidence 99999997
No 2
>PLN02195 cellulose synthase A
Probab=100.00 E-value=3e-54 Score=436.27 Aligned_cols=229 Identities=33% Similarity=0.632 Sum_probs=205.1
Q ss_pred CCCCCceeeeecccch-hHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 025906 11 QNSLPLHVSHVKKSSL-IINRSLVLLHFTSLAFLVYYRVSYFFQVSNARAAPLLPWLLVFAAELLLSFQWLLGIAYRWRP 89 (246)
Q Consensus 11 ~~~~~l~~~~~~~~~~-~~~R~~~~~~l~~~~~Yl~wR~~~tl~~~~~~~~~~~~wi~l~~aE~~~~~~~lL~~~~~~~p 89 (246)
+..+|||++++.+... .+||+++++.++++++++.||+++..+ .+.|+|+++++||+|++|+|+|.|+.+|+|
T Consensus 155 ~~~~pL~~~~~i~~~~~~pyR~~~~~~l~~l~~~l~yRi~~~~~------~~~~~Wl~s~~cE~wFaf~Wll~q~~Kw~P 228 (977)
T PLN02195 155 DAYEPLSRVIPIPRNKLTPYRAVIIMRLIILGLFFHYRITNPVD------SAFGLWLTSVICEIWFAFSWVLDQFPKWSP 228 (977)
T ss_pred cccCCceEEEecCcccchhHHHHHHHHHHHHHHHHHHHhcCccc------cchHHHHHHHHHHHHHHHHHHHhccccccc
Confidence 3568899998866554 469999999999999999999977432 345999999999999999999999999999
Q ss_pred cCCCCCCCCCCc-------CCCCCceeEEEeccCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHH
Q 025906 90 ISRTVFPERLPE-------ADQLPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREA 162 (246)
Q Consensus 90 ~~r~~~~~~l~~-------~~~~P~Vdv~V~tyNp~~E~~~vv~~Tl~~~~~ldYP~~kl~vyvlDDG~~d~t~~~~~ea 162 (246)
++|.+++++|.+ ++++|.|||||+|.||.+|||.++.|||+|++++|||.+|+.|||+|||++.+|+++|.||
T Consensus 229 v~R~t~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EA 308 (977)
T PLN02195 229 INRETYIDRLSARYEREGEPSQLAAVDFFVSTVDPLKEPPLITANTVLSILAVDYPVDKVSCYVSDDGAAMLSFESLVET 308 (977)
T ss_pred ccceECHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHHHHHHHHH
Confidence 999999987753 2569999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhchHHHHHHcCCCcCCCccceeCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHhhc------------cCCCC
Q 025906 163 WKFARSWLPFCKRFGIKTICPEAYFSDPENGDGDSGNAEFIVEREKIKEKYTEFKERVTRAIE------------KWGLE 230 (246)
Q Consensus 163 ~~~a~~w~~lc~~~gv~~r~p~~Y~~r~~~~~aKaGnln~a~~~~~~~~~y~~f~~ri~~~~~------------~~~~~ 230 (246)
++||+.|+|||+|++|+||+||+||+.+........+.+|..||++||++||+|++||+++.+ .++++
T Consensus 309 a~FA~~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~~K~eYEe~k~RIe~~~~~~~~~~~~~~~m~d~t~ 388 (977)
T PLN02195 309 AEFARKWVPFCKKYSIEPRAPEFYFSQKIDYLKDKVQPSFVKERRAMKRDYEEYKVRVNALVAKAQKTPEEGWTMQDGTP 388 (977)
T ss_pred HHHHHhhcccccccCCCcCCHHHHhccCCCcccCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCcccccccCCcc
Confidence 999999999999999999999999999866543345689999999999999999999998652 45678
Q ss_pred CCCCCCCCCCCCcccC
Q 025906 231 NEGISRSRDHPSVVEV 246 (246)
Q Consensus 231 ~~~~~~~~~h~~iv~v 246 (246)
|.+ .+++|||+||||
T Consensus 389 W~g-~~~~dHp~IIqV 403 (977)
T PLN02195 389 WPG-NNTRDHPGMIQV 403 (977)
T ss_pred CCC-CCCCCCcchhhh
Confidence 985 588999999998
No 3
>PLN02915 cellulose synthase A [UDP-forming], catalytic subunit
Probab=100.00 E-value=3.8e-54 Score=437.53 Aligned_cols=228 Identities=34% Similarity=0.616 Sum_probs=203.7
Q ss_pred CCCCceeeeecccch-hHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 025906 12 NSLPLHVSHVKKSSL-IINRSLVLLHFTSLAFLVYYRVSYFFQVSNARAAPLLPWLLVFAAELLLSFQWLLGIAYRWRPI 90 (246)
Q Consensus 12 ~~~~l~~~~~~~~~~-~~~R~~~~~~l~~~~~Yl~wR~~~tl~~~~~~~~~~~~wi~l~~aE~~~~~~~lL~~~~~~~p~ 90 (246)
+.+||+++++.+... .+||+++++.++++++++.||+++ +. . .+.|+|+++++||+|++|+|+|.|+.+|+|+
T Consensus 191 ~~~pL~~~~~i~~~~~~pyR~~~~~rlv~l~~fl~yRi~~--~~--~--~a~~~Wl~s~~cE~wFaf~Wll~q~~Kw~Pv 264 (1044)
T PLN02915 191 ARQPLWRKVPIPSSKINPYRIVIVLRLVILCFFFRFRILT--PA--Y--DAYPLWLISVICEIWFALSWILDQFPKWFPI 264 (1044)
T ss_pred cCCCceEEEecCcccchhHHHHHHHHHHHHHHHHHHHhcC--cC--C--CchHHHHHHHHHHHHHHHHHHHccCcccccc
Confidence 568899998866553 469999999999999999999987 22 1 4689999999999999999999999999999
Q ss_pred CCCCCCCCCCc-------CCCCCceeEEEeccCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHH
Q 025906 91 SRTVFPERLPE-------ADQLPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAW 163 (246)
Q Consensus 91 ~r~~~~~~l~~-------~~~~P~Vdv~V~tyNp~~E~~~vv~~Tl~~~~~ldYP~~kl~vyvlDDG~~d~t~~~~~ea~ 163 (246)
+|.+++++|.. ++.+|.|||||+|.||.+|||.++.|||+|++++|||.+|+.|||+|||++.+|+++|.||+
T Consensus 265 ~R~t~~drL~~r~e~~~~~~~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa 344 (1044)
T PLN02915 265 NRETYLDRLSMRFERDGEPNRLAPVDVFVSTVDPLKEPPIITANTVLSILAVDYPVDKVSCYVSDDGASMLLFDTLSETA 344 (1044)
T ss_pred ccccCHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceeEEEecCCchHhHHHHHHHHH
Confidence 99999988763 23499999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhchHHHHHHcCCCcCCCccceeCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHhhcc------------CCCCC
Q 025906 164 KFARSWLPFCKRFGIKTICPEAYFSDPENGDGDSGNAEFIVEREKIKEKYTEFKERVTRAIEK------------WGLEN 231 (246)
Q Consensus 164 ~~a~~w~~lc~~~gv~~r~p~~Y~~r~~~~~aKaGnln~a~~~~~~~~~y~~f~~ri~~~~~~------------~~~~~ 231 (246)
+||+.|+|||+|++|+||+||+||+.+.......-+.+|..||++||++||+|++||+++.++ ++++|
T Consensus 345 ~FAk~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mKreYEe~K~RIe~l~~~~~~~~~~~~~m~dgt~W 424 (1044)
T PLN02915 345 EFARRWVPFCKKHNIEPRAPEFYFSQKIDYLKDKVQPTFVKERRAMKREYEEFKVRINALVAKAQKKPEEGWVMQDGTPW 424 (1044)
T ss_pred HHHHhhcchhhhcCCCcCCHHHHhccCCCccccccCchhHHHHHHHHHHHHHHHHHHHHHHhhhccCCcccccccCCccC
Confidence 999999999999999999999999998654432223599999999999999999999987532 56799
Q ss_pred CCCCCCCCCCCcccC
Q 025906 232 EGISRSRDHPSVVEV 246 (246)
Q Consensus 232 ~~~~~~~~h~~iv~v 246 (246)
+++.+ +|||+||||
T Consensus 425 ~g~~~-~dHp~IIqV 438 (1044)
T PLN02915 425 PGNNT-RDHPGMIQV 438 (1044)
T ss_pred CCCCC-CCCccceEE
Confidence 97666 899999997
No 4
>PLN02400 cellulose synthase
Probab=100.00 E-value=4.3e-54 Score=438.31 Aligned_cols=228 Identities=36% Similarity=0.632 Sum_probs=205.4
Q ss_pred CCCCceeeeecccch-hHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 025906 12 NSLPLHVSHVKKSSL-IINRSLVLLHFTSLAFLVYYRVSYFFQVSNARAAPLLPWLLVFAAELLLSFQWLLGIAYRWRPI 90 (246)
Q Consensus 12 ~~~~l~~~~~~~~~~-~~~R~~~~~~l~~~~~Yl~wR~~~tl~~~~~~~~~~~~wi~l~~aE~~~~~~~lL~~~~~~~p~ 90 (246)
+.+|||++++.+... .+||+++++.+++++++|.||+++..+ .+.|+|+++++||+|++|+|+|.|+.+|+|+
T Consensus 260 ~~~pL~~~~~i~~~~~~~yR~~~~~~lv~l~~~l~yRi~~~~~------~~~~~Wl~s~~cE~wFaf~Wll~q~~Kw~Pv 333 (1085)
T PLN02400 260 ARLPMSRVVPIPSSRLTPYRIVIILRLIILGFFLQYRVTHPVK------DAYGLWLTSVICEIWFALSWLLDQFPKWYPI 333 (1085)
T ss_pred ccCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHhhccCc------ccHHHHHHHHHHHHHHHHHHHHccCcccccc
Confidence 468899998866553 579999999999999999999987432 3589999999999999999999999999999
Q ss_pred CCCCCCCCCCc-------CCCCCceeEEEeccCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHH
Q 025906 91 SRTVFPERLPE-------ADQLPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAW 163 (246)
Q Consensus 91 ~r~~~~~~l~~-------~~~~P~Vdv~V~tyNp~~E~~~vv~~Tl~~~~~ldYP~~kl~vyvlDDG~~d~t~~~~~ea~ 163 (246)
+|.+++++|.+ ++++|.|||||+|.||.+|||.++.|||+|++++|||.+|+.|||+|||++.+|+++|.||+
T Consensus 334 ~R~t~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~Al~Eaa 413 (1085)
T PLN02400 334 NRETYLDRLALRYDRDGEPSQLAPVDVFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGSAMLTFEALSETA 413 (1085)
T ss_pred cceeCHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHHHHHHHHHH
Confidence 99999987753 24699999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhchHHHHHHcCCCcCCCccceeCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHhh------------ccCCCCC
Q 025906 164 KFARSWLPFCKRFGIKTICPEAYFSDPENGDGDSGNAEFIVEREKIKEKYTEFKERVTRAI------------EKWGLEN 231 (246)
Q Consensus 164 ~~a~~w~~lc~~~gv~~r~p~~Y~~r~~~~~aKaGnln~a~~~~~~~~~y~~f~~ri~~~~------------~~~~~~~ 231 (246)
+||+.|+|||+|++|+||+||+||+.+........+.+|..||++||++||+|++||+++. +.++++|
T Consensus 414 ~FA~~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mK~eYEe~k~RIe~l~~~~~~~~~~~~~m~dgt~W 493 (1085)
T PLN02400 414 EFARKWVPFCKKHNIEPRAPEFYFAQKIDYLKDKIQPSFVKERRAMKREYEEFKVRINALVAKAQKIPEEGWTMQDGTPW 493 (1085)
T ss_pred HHHHhhcchhhhcCCCcCCHHHHhccCCCcccCCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhccCCccccccccCccC
Confidence 9999999999999999999999999987655334568999999999999999999999875 1356789
Q ss_pred CCCCCCCCCCCcccC
Q 025906 232 EGISRSRDHPSVVEV 246 (246)
Q Consensus 232 ~~~~~~~~h~~iv~v 246 (246)
+++ +++|||+||||
T Consensus 494 ~g~-~~~dHp~iIqV 507 (1085)
T PLN02400 494 PGN-NPRDHPGMIQV 507 (1085)
T ss_pred CCC-CCCCCchhhhh
Confidence 854 89999999997
No 5
>PLN02189 cellulose synthase
Probab=100.00 E-value=7.9e-54 Score=435.16 Aligned_cols=230 Identities=34% Similarity=0.619 Sum_probs=204.8
Q ss_pred cCCCCCceeeeecccch-hHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 025906 10 QQNSLPLHVSHVKKSSL-IINRSLVLLHFTSLAFLVYYRVSYFFQVSNARAAPLLPWLLVFAAELLLSFQWLLGIAYRWR 88 (246)
Q Consensus 10 ~~~~~~l~~~~~~~~~~-~~~R~~~~~~l~~~~~Yl~wR~~~tl~~~~~~~~~~~~wi~l~~aE~~~~~~~lL~~~~~~~ 88 (246)
..+.+|||++++.+... .+||+++++.++++++++.||+++... .+.|+|+++++||+|++|+|+|.|+.+|+
T Consensus 233 ~~~~~pL~~~~~~~~~~~~pyR~~~~~~l~~l~~~l~yRi~~~~~------~~~~~W~~s~~~E~wFaf~Wll~q~~kw~ 306 (1040)
T PLN02189 233 DEARQPLSRKVPIASSKVNPYRMVIVARLVVLAFFLRYRILHPVH------DAIGLWLTSIICEIWFAVSWILDQFPKWF 306 (1040)
T ss_pred ccCCCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHhcCcCc------cchHHHHHHHHHHHHHHHHHHHccCcccc
Confidence 44688999998866553 469999999999999999999987432 34899999999999999999999999999
Q ss_pred ccCCCCCCCCCCc-------CCCCCceeEEEeccCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHH
Q 025906 89 PISRTVFPERLPE-------ADQLPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMRE 161 (246)
Q Consensus 89 p~~r~~~~~~l~~-------~~~~P~Vdv~V~tyNp~~E~~~vv~~Tl~~~~~ldYP~~kl~vyvlDDG~~d~t~~~~~e 161 (246)
|++|.+++++|.+ ++.+|.|||||+|.||.+|||.++.|||+|++++|||.+|+.|||+|||++.+|+++|.|
T Consensus 307 Pv~R~t~~drL~~r~~~~~~~~~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~E 386 (1040)
T PLN02189 307 PIDRETYLDRLSLRYEREGEPNMLSPVDIFVSTVDPLKEPPLVTANTVLSILAMDYPVDKISCYVSDDGASMLTFEALSE 386 (1040)
T ss_pred cccceeCHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceeEEEecCCchHHHHHHHHH
Confidence 9999999987754 234999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhchHHHHHHcCCCcCCCccceeCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHhh------------ccCCC
Q 025906 162 AWKFARSWLPFCKRFGIKTICPEAYFSDPENGDGDSGNAEFIVEREKIKEKYTEFKERVTRAI------------EKWGL 229 (246)
Q Consensus 162 a~~~a~~w~~lc~~~gv~~r~p~~Y~~r~~~~~aKaGnln~a~~~~~~~~~y~~f~~ri~~~~------------~~~~~ 229 (246)
|++||+.|+|||+|++|+||+||+||+.+..........+|..||++||++||+|++||+++. .++++
T Consensus 387 Aa~FA~~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~~K~eYEe~kvRI~~l~a~~~~~p~~~~~m~dGt 466 (1040)
T PLN02189 387 TAEFARKWVPFCKKFSIEPRAPEFYFSLKVDYLKDKVQPTFVKERRAMKREYEEFKVRINAIVAKAQKVPPEGWIMQDGT 466 (1040)
T ss_pred HHHHHHhhcccccccCCCcCCHHHHhccCCCcccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCccCCccceeccCc
Confidence 999999999999999999999999999886543333445999999999999999999999765 24557
Q ss_pred CCCCCCCCCCCCCcccC
Q 025906 230 ENEGISRSRDHPSVVEV 246 (246)
Q Consensus 230 ~~~~~~~~~~h~~iv~v 246 (246)
+|+++ +++|||+||||
T Consensus 467 ~W~g~-~~~dHp~IiQV 482 (1040)
T PLN02189 467 PWPGN-NTRDHPGMIQV 482 (1040)
T ss_pred cCCCC-CCCCCHHHHHH
Confidence 89865 88999999997
No 6
>PLN02436 cellulose synthase A
Probab=100.00 E-value=1.1e-53 Score=434.34 Aligned_cols=228 Identities=34% Similarity=0.619 Sum_probs=203.1
Q ss_pred CCCCceeeeecccch-hHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 025906 12 NSLPLHVSHVKKSSL-IINRSLVLLHFTSLAFLVYYRVSYFFQVSNARAAPLLPWLLVFAAELLLSFQWLLGIAYRWRPI 90 (246)
Q Consensus 12 ~~~~l~~~~~~~~~~-~~~R~~~~~~l~~~~~Yl~wR~~~tl~~~~~~~~~~~~wi~l~~aE~~~~~~~lL~~~~~~~p~ 90 (246)
+.+||+++++.+... .+||+++++.+++++++|.||+++..+ .+.|+|+++++||+|++|+|+|.|+.+|+|+
T Consensus 269 ~~~pL~~~~~i~~~~~~pyR~~~~~rlv~l~~fl~yRi~~~~~------~a~~~Wl~s~~cE~WFaf~Wll~Q~~Kw~Pv 342 (1094)
T PLN02436 269 GRQPLSRKLPIPSSKINPYRMIIILRLVILGLFFHYRILHPVN------DAYGLWLTSVICEIWFAVSWILDQFPKWYPI 342 (1094)
T ss_pred cCCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHhhccCc------ccHHHHHHHHHHHHHHHHHHHHccCcccccc
Confidence 578899998866553 469999999999999999999987432 3589999999999999999999999999999
Q ss_pred CCCCCCCCCCc-------CCCCCceeEEEeccCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHH
Q 025906 91 SRTVFPERLPE-------ADQLPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAW 163 (246)
Q Consensus 91 ~r~~~~~~l~~-------~~~~P~Vdv~V~tyNp~~E~~~vv~~Tl~~~~~ldYP~~kl~vyvlDDG~~d~t~~~~~ea~ 163 (246)
+|.+++++|.+ ++++|.|||||+|.||.+|||.++.|||+|++++|||.+|+.|||+|||++.+|+++|.||+
T Consensus 343 ~R~t~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa 422 (1094)
T PLN02436 343 ERETYLDRLSLRYEKEGKPSELASVDVFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETS 422 (1094)
T ss_pred cceeCHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHHHHHHHHHH
Confidence 99999987753 24699999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhchHHHHHHcCCCcCCCccceeCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHhhc------------cCCCCC
Q 025906 164 KFARSWLPFCKRFGIKTICPEAYFSDPENGDGDSGNAEFIVEREKIKEKYTEFKERVTRAIE------------KWGLEN 231 (246)
Q Consensus 164 ~~a~~w~~lc~~~gv~~r~p~~Y~~r~~~~~aKaGnln~a~~~~~~~~~y~~f~~ri~~~~~------------~~~~~~ 231 (246)
+||+.|+|||+|++|+||+||+||+.+.......-..+|..||++||++||+|++||+++.+ .++++|
T Consensus 423 ~FAk~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mKreYEe~K~RIe~l~~~~~~vp~~~~~m~dgt~W 502 (1094)
T PLN02436 423 EFARKWVPFCKKFSIEPRAPEWYFSQKMDYLKNKVHPAFVRERRAMKREYEEFKVKINALVATAQKVPEDGWTMQDGTPW 502 (1094)
T ss_pred HHHHhhcccccccCCCcCCHHHHhhccCCcccccCChhHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhhhhccCccC
Confidence 99999999999999999999999998865332111348999999999999999999998753 355789
Q ss_pred CCCCCCCCCCCcccC
Q 025906 232 EGISRSRDHPSVVEV 246 (246)
Q Consensus 232 ~~~~~~~~h~~iv~v 246 (246)
++ .+++|||+||||
T Consensus 503 ~g-~~~~dHp~IIqV 516 (1094)
T PLN02436 503 PG-NNVRDHPGMIQV 516 (1094)
T ss_pred CC-CCCCCCccceEE
Confidence 85 489999999997
No 7
>PLN02638 cellulose synthase A (UDP-forming), catalytic subunit
Probab=100.00 E-value=1.1e-53 Score=435.08 Aligned_cols=229 Identities=33% Similarity=0.631 Sum_probs=204.9
Q ss_pred CCCCCceeeeecccch-hHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 025906 11 QNSLPLHVSHVKKSSL-IINRSLVLLHFTSLAFLVYYRVSYFFQVSNARAAPLLPWLLVFAAELLLSFQWLLGIAYRWRP 89 (246)
Q Consensus 11 ~~~~~l~~~~~~~~~~-~~~R~~~~~~l~~~~~Yl~wR~~~tl~~~~~~~~~~~~wi~l~~aE~~~~~~~lL~~~~~~~p 89 (246)
.+.+|||++++.+... .+||+++++.+++++++|.||+++.. ..+.|+|+++++||+|++|+|+|.|+.+|+|
T Consensus 252 ~~~~pL~~~~~i~~~~~~~yR~~~~~~l~~l~~~l~yRi~~~~------~~~~~~Wl~s~~cE~WFaf~Wll~q~~Kw~P 325 (1079)
T PLN02638 252 EARQPLSRKVSIPSSRINPYRMVIVLRLVILCIFLHYRITNPV------RNAYALWLISVICEIWFALSWILDQFPKWLP 325 (1079)
T ss_pred cCCCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHHhccC------CccHHHHHHHHHHHHHHHHHHHHhccccccc
Confidence 3678899998866553 57999999999999999999998743 1458999999999999999999999999999
Q ss_pred cCCCCCCCCCCc-------CCCCCceeEEEeccCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHH
Q 025906 90 ISRTVFPERLPE-------ADQLPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREA 162 (246)
Q Consensus 90 ~~r~~~~~~l~~-------~~~~P~Vdv~V~tyNp~~E~~~vv~~Tl~~~~~ldYP~~kl~vyvlDDG~~d~t~~~~~ea 162 (246)
++|.+++++|.+ ++++|.|||||+|.||.+|||.++.|||+|++++|||.+|+.|||+|||++.+|+++|.||
T Consensus 326 v~R~t~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EA 405 (1079)
T PLN02638 326 VNRETYLDRLALRYDREGEPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSET 405 (1079)
T ss_pred cccccCHHHHHHHhccCCCcccCCCccEEEeCCCCccCccHHHHHHHHHHHhhcccccceeEEEecCCchHHHHHHHHHH
Confidence 999999987754 2469999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhchHHHHHHcCCCcCCCccceeCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHhh------------ccCCCC
Q 025906 163 WKFARSWLPFCKRFGIKTICPEAYFSDPENGDGDSGNAEFIVEREKIKEKYTEFKERVTRAI------------EKWGLE 230 (246)
Q Consensus 163 ~~~a~~w~~lc~~~gv~~r~p~~Y~~r~~~~~aKaGnln~a~~~~~~~~~y~~f~~ri~~~~------------~~~~~~ 230 (246)
++||+.|+|||+|++|+||+||+||+.+..........+|..||++||++||+|++||+++. .+++++
T Consensus 406 a~FA~~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mK~eYEe~k~RIe~l~a~~~~~p~~~~~m~dgt~ 485 (1079)
T PLN02638 406 SEFARKWVPFCKKYNIEPRAPEWYFAQKIDYLKDKVQPSFVKDRRAMKREYEEFKVRINGLVAKAQKVPEEGWIMQDGTP 485 (1079)
T ss_pred HHHHHhhcccccccCCCcCCHHHHhccCCCcccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhccccCCccccccCCcc
Confidence 99999999999999999999999999986543333445999999999999999999999765 235679
Q ss_pred CCCCCCCCCCCCcccC
Q 025906 231 NEGISRSRDHPSVVEV 246 (246)
Q Consensus 231 ~~~~~~~~~h~~iv~v 246 (246)
|+++ +++|||+||||
T Consensus 486 W~g~-~~~dHp~IiqV 500 (1079)
T PLN02638 486 WPGN-NTRDHPGMIQV 500 (1079)
T ss_pred CCCC-CCCCCHHHHHH
Confidence 9865 88999999997
No 8
>PLN02893 Cellulose synthase-like protein
Probab=100.00 E-value=2.4e-53 Score=422.99 Aligned_cols=226 Identities=41% Similarity=0.687 Sum_probs=203.3
Q ss_pred HHhcCCCCCceeeeecccchhHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHh
Q 025906 7 MEKQQNSLPLHVSHVKKSSLIINRSLVLLHFTSLAFLVYYRVSYFFQVSNARAAPLLPWLLVFAAELLLSFQWLLGIAYR 86 (246)
Q Consensus 7 ~~~~~~~~~l~~~~~~~~~~~~~R~~~~~~l~~~~~Yl~wR~~~tl~~~~~~~~~~~~wi~l~~aE~~~~~~~lL~~~~~ 86 (246)
+++..+.+||||+++.+++ .++|+++++++++++..++||+.+.... ...|.|+++++||+|++++|++.|+.+
T Consensus 5 ~~~~~~~~pL~~~~~~~~~-~~~R~~~~~~~~~i~~ll~~r~~~~~~~-----~~~~~w~~~~~~e~wf~f~W~l~q~~k 78 (734)
T PLN02893 5 TTASTGAPPLHTCHPMRRT-IANRVFAVVYSCAILALLYHHVIALLHS-----TTTLITLLLLLADIVLAFMWATTQAFR 78 (734)
T ss_pred ccCCCCCCCceeeeecCCc-hHHHHHHHHHHHHHHHHHHHHhcccccc-----cchHHHHHHHHHHHHHHHHHHHccCcc
Confidence 4455678999999996644 4699999999999999999999886543 237899999999999999999999999
Q ss_pred hcccCCCCCCCCCCc---CCCCCceeEEEeccCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHH
Q 025906 87 WRPISRTVFPERLPE---ADQLPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAW 163 (246)
Q Consensus 87 ~~p~~r~~~~~~l~~---~~~~P~Vdv~V~tyNp~~E~~~vv~~Tl~~~~~ldYP~~kl~vyvlDDG~~d~t~~~~~ea~ 163 (246)
|+|++|.++++++.+ .+++|.|||||||.||.+|||.++.+|++|+++.|||.||+.|||+|||++..|++++.||+
T Consensus 79 ~~Pv~r~~~~~~L~~~~~~~~lP~vDvfv~TaDP~~Epp~~~~ntvLSilA~dyp~~kls~YvSDDGgs~lt~~al~Eaa 158 (734)
T PLN02893 79 MCPVHRRVFIEHLEHYAKESDYPGLDVFICTADPYKEPPMGVVNTALSVMAYDYPTEKLSVYVSDDGGSKLTLFAFMEAA 158 (734)
T ss_pred ccccccccCHHHHhhhcccccCCcceeeeccCCcccCchHHHHHHHHHHHhhccCccceEEEEecCCccHHHHHHHHHHH
Confidence 999999999988864 45799999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhchHHHHHHcCCCcCCCccceeCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHhh---------------ccCC
Q 025906 164 KFARSWLPFCKRFGIKTICPEAYFSDPENGDGDSGNAEFIVEREKIKEKYTEFKERVTRAI---------------EKWG 228 (246)
Q Consensus 164 ~~a~~w~~lc~~~gv~~r~p~~Y~~r~~~~~aKaGnln~a~~~~~~~~~y~~f~~ri~~~~---------------~~~~ 228 (246)
+||+.|+|||+|++|++|+||+||+.+.. ++..||++||++||||++||+++. ++++
T Consensus 159 ~FA~~WvPFCrk~~ie~R~P~~YF~~~~~--------~~~~e~~~~k~~Yee~k~ri~~~~~~~~~~~~~~~~~~~~~~f 230 (734)
T PLN02893 159 KFATHWLPFCKKNKIVERCPEAYFSSNSH--------SWSPETEQIKMMYESMKVRVENVVERGKVSTDYITCDQEREAF 230 (734)
T ss_pred HHHHhhcccccccCCCcCCHHHHhccCCC--------ccchHHHHHHHHHHHHHHHHHHHHhcCcCchhhhhhccccccc
Confidence 99999999999999999999999987622 234599999999999999999873 2356
Q ss_pred CCCCCCCCCCCCCCcccC
Q 025906 229 LENEGISRSRDHPSVVEV 246 (246)
Q Consensus 229 ~~~~~~~~~~~h~~iv~v 246 (246)
..|..+++++|||+||||
T Consensus 231 ~~w~~~~~~~dH~~ivqV 248 (734)
T PLN02893 231 SRWTDKFTRQDHPTVIQV 248 (734)
T ss_pred ccCcCCCCCCCCCceeee
Confidence 789989999999999997
No 9
>PLN02248 cellulose synthase-like protein
Probab=100.00 E-value=5.7e-53 Score=430.13 Aligned_cols=207 Identities=37% Similarity=0.638 Sum_probs=187.1
Q ss_pred CCCCceeeeecccch-hHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 025906 12 NSLPLHVSHVKKSSL-IINRSLVLLHFTSLAFLVYYRVSYFFQVSNARAAPLLPWLLVFAAELLLSFQWLLGIAYRWRPI 90 (246)
Q Consensus 12 ~~~~l~~~~~~~~~~-~~~R~~~~~~l~~~~~Yl~wR~~~tl~~~~~~~~~~~~wi~l~~aE~~~~~~~lL~~~~~~~p~ 90 (246)
+-+|||++++.+... .+||+++++.+++++++|.||+.+ +. ..+.|+|+++++||+|++|+|+|.|+.+|+|+
T Consensus 266 ~~~pL~~~~~i~~~il~pyRl~~~~rlv~l~~fl~~Ri~~--~~----~~~~~~W~~s~~cE~WFaf~Wll~q~~Kw~Pv 339 (1135)
T PLN02248 266 PWRPLTRKVKISAAILSPYRLLILIRLVVLGLFLTWRVRN--PN----EDAMWLWGMSVVCEIWFAFSWLLDQLPKLCPI 339 (1135)
T ss_pred CCCCceeeeecCcccccHHHHHHHHHHHHHHHHHHHHhcC--CC----CcchHHHHHHHHHHHHHHHHHHHhcccccccc
Confidence 458899998866553 469999999999999999999987 22 14589999999999999999999999999999
Q ss_pred CCCCCCCCCCc------------CCCCCceeEEEeccCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHH
Q 025906 91 SRTVFPERLPE------------ADQLPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLG 158 (246)
Q Consensus 91 ~r~~~~~~l~~------------~~~~P~Vdv~V~tyNp~~E~~~vv~~Tl~~~~~ldYP~~kl~vyvlDDG~~d~t~~~ 158 (246)
+|.+++++|.+ ++++|.|||||+|.||.+|||.++.|||+|++++|||.+|+.|||+|||++.+|+++
T Consensus 340 ~R~t~~~rL~~r~e~~~~~~p~g~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKLacYvSDDGgS~LTf~A 419 (1135)
T PLN02248 340 NRATDLAVLKEKFETPSPSNPTGRSDLPGIDVFVSTADPEKEPPLVTANTILSILAADYPVEKLACYLSDDGGALLTFEA 419 (1135)
T ss_pred ccccCHHHHHHHhccccccCCCCcccCCcceeEeecCCCccCcchHHHHHHHHHhcccccccceeEEEecCCchHHHHHH
Confidence 99998876643 236999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhchHHHHHHcCCCcCCCccceeCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHhh
Q 025906 159 MREAWKFARSWLPFCKRFGIKTICPEAYFSDPENGDGDSGNAEFIVEREKIKEKYTEFKERVTRAI 224 (246)
Q Consensus 159 ~~ea~~~a~~w~~lc~~~gv~~r~p~~Y~~r~~~~~aKaGnln~a~~~~~~~~~y~~f~~ri~~~~ 224 (246)
|.||++||+.|+|||+|++|+||+||+||+.+..........+|..||++||++|||||+||+++.
T Consensus 420 L~EAa~FA~~WVPFCrKh~IepRaPe~YFs~~~~~~~~~~~~~F~~d~r~~KreYee~K~RIe~l~ 485 (1135)
T PLN02248 420 MAEAASFARIWVPFCRKHDIEPRNPESYFSLKRDPTKNKVRPDFVKDRRRVKREYDEFKVRINGLP 485 (1135)
T ss_pred HHHHHHHHHhhcchhhhcCCCcCCHHHHhccCCCcccCccchhHHHHHHHHHHHHHHHHHHHHhhh
Confidence 999999999999999999999999999999886655334568999999999999999999999773
No 10
>PF03552 Cellulose_synt: Cellulose synthase; InterPro: IPR005150 Cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues, is the major component of wood and thus paper, and is synthesized by plants, most algae, some bacteria and fungi, and even some animals. The genes that synthesize cellulose in higher plants differ greatly from the well-characterised genes found in Acetobacter and Agrobacterium spp. More correctly designated as "cellulose synthase catalytic subunits", plant cellulose synthase (CesA) proteins are integral membrane proteins, approximately 1,000 amino acids in length. There are a number of highly conserved residues, including several motifs shown to be necessary for processive glycosyltransferase activity [].; GO: 0016760 cellulose synthase (UDP-forming) activity, 0030244 cellulose biosynthetic process, 0016020 membrane
Probab=100.00 E-value=2.9e-37 Score=306.48 Aligned_cols=138 Identities=46% Similarity=0.821 Sum_probs=127.9
Q ss_pred eeEEEeccCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHHcCCCcCCCccce
Q 025906 108 IDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICPEAYF 187 (246)
Q Consensus 108 Vdv~V~tyNp~~E~~~vv~~Tl~~~~~ldYP~~kl~vyvlDDG~~d~t~~~~~ea~~~a~~w~~lc~~~gv~~r~p~~Y~ 187 (246)
|||||+|.||.+|||-++.+||+|++++|||.+|+.|||+|||+++.|++++.||++||+.|+|||+|++|+||+|++||
T Consensus 1 vDvFv~TaDP~~EPp~~~~nTvLS~lA~dYP~~kls~YvSDDg~s~ltf~al~Ea~~FA~~WvPFCkk~~ie~R~P~~YF 80 (720)
T PF03552_consen 1 VDVFVCTADPEKEPPLVTANTVLSILAYDYPVEKLSCYVSDDGGSMLTFYALMEAAKFAKHWVPFCKKYNIEPRAPEAYF 80 (720)
T ss_pred CceEEecCCCCcCCCeeeHHHHHHHHhhcCCccceeEEEecCCchHHHHHHHHHHHHHHhhhcchhhccCCccCCHHHHh
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHhhc------------cCCCCCCCCCCCCCCCCcccC
Q 025906 188 SDPENGDGDSGNAEFIVEREKIKEKYTEFKERVTRAIE------------KWGLENEGISRSRDHPSVVEV 246 (246)
Q Consensus 188 ~r~~~~~aKaGnln~a~~~~~~~~~y~~f~~ri~~~~~------------~~~~~~~~~~~~~~h~~iv~v 246 (246)
+.+.+.+......+|..||++||++||+|++||+++.+ .++++|. +++++|||+||||
T Consensus 81 ~~~~~~~~~~~~~~f~~e~~~~k~~ye~~k~ri~~~~~~~~~~~~~~~~~~~~~~w~-~~~~~dH~~iiqv 150 (720)
T PF03552_consen 81 SSKIDPLKDKVQPEFVKERRAMKREYEEFKVRIEALVAKIQKVPEEGWTMQDGTPWP-GNTRRDHPGIIQV 150 (720)
T ss_pred ccCCCcccCCcChhHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccceeccCCCcCC-CCCCcCChhheEe
Confidence 99876555556789999999999999999999997632 2347998 5799999999997
No 11
>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming). Cellulose synthase catalyzes the beta-1,4 polymerization of glucose residues in the formation of cellulose. In bacteria, the substrate is UDP-glucose. The synthase consists of two subunits (or domains in the frequent cases where it is encoded as a single polypeptide), the catalytic domain modelled here and the regulatory domain (pfam03170). The regulatory domain binds the allosteric activator cyclic di-GMP. The protein is membrane-associated and probably assembles into multimers such that the individual cellulose strands can self-assemble into multi-strand fibrils.
Probab=99.96 E-value=1.5e-29 Score=254.70 Aligned_cols=185 Identities=26% Similarity=0.389 Sum_probs=155.9
Q ss_pred HHHHHHHHHHH-HHHHHHHHhhhcccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCcCCCCCc
Q 025906 29 NRSLVLLHFTS-LAFLVYYRVSYFFQVSNARAAPLLPWLLVFAAELLLSFQWLLGIAYRWRPISRTVFPERLPEADQLPG 107 (246)
Q Consensus 29 ~R~~~~~~l~~-~~~Yl~wR~~~tl~~~~~~~~~~~~wi~l~~aE~~~~~~~lL~~~~~~~p~~r~~~~~~l~~~~~~P~ 107 (246)
.|++.++..++ .++|++||++.|+|. .+..+..++++++++|+++.+..+++++..+++..|++.+.+ .+.+.+|+
T Consensus 56 ~~~~~~~~~~~~~~~y~~wr~~~tl~~--~~~~~~~~~~~l~~~e~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~~P~ 132 (713)
T TIGR03030 56 PRLLLLVLSVFISLRYLWWRLTETLPF--DNTLNFIFGTLLLLAELYSITILLLGYFQTVRPLDRTPVPLP-LDPEEWPT 132 (713)
T ss_pred HHHHHHHHHHHHHHHHHHhheeeecCC--CccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCccCCC-CCcccCCe
Confidence 47776655555 478999999999986 345777899999999999999989988888888777653321 12467899
Q ss_pred eeEEEeccCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHH----HHHHHHHHhhchHHHHHHcCCCcCCC
Q 025906 108 IDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLL----GMREAWKFARSWLPFCKRFGIKTICP 183 (246)
Q Consensus 108 Vdv~V~tyNp~~E~~~vv~~Tl~~~~~ldYP~~kl~vyvlDDG~~d~t~~----~~~ea~~~a~~w~~lc~~~gv~~r~p 183 (246)
|||+||+|| |+++++++|+.+++++|||+++++|+|+||||+|.|.. ..+|+++.+..+.++|+++||.
T Consensus 133 VsViIP~yN---E~~~iv~~tl~s~~~~dYP~~~~eIiVvDDgStD~t~~~~~~~~~~~~~~~~~~~~l~~~~~v~---- 205 (713)
T TIGR03030 133 VDVFIPTYN---EDLEIVATTVLAAKNMDYPADKFRVWILDDGGTDQKRNDPDPEQAEAAQRREELKEFCRKLGVN---- 205 (713)
T ss_pred eEEEEcCCC---CCHHHHHHHHHHHHhCCCCccceEEEEEECcCCccccccchhhhhhhhhhHHHHHHHHHHcCcE----
Confidence 999999999 99999999999999999999999999999999999853 3444444556788999999999
Q ss_pred ccceeCCCCCCCCCCchhhHHHH---------HHHHHHHHHHHHHHHHhhc
Q 025906 184 EAYFSDPENGDGDSGNAEFIVER---------EKIKEKYTEFKERVTRAIE 225 (246)
Q Consensus 184 ~~Y~~r~~~~~aKaGnln~a~~~---------~~~~~~y~~f~~ri~~~~~ 225 (246)
|++|++|.|+||||+|+++++ |+|..+..+++.++.+.+.
T Consensus 206 --yi~r~~n~~~KAgnLN~al~~a~gd~Il~lDAD~v~~pd~L~~~v~~f~ 254 (713)
T TIGR03030 206 --YITRPRNVHAKAGNINNALKHTDGELILIFDADHVPTRDFLQRTVGWFV 254 (713)
T ss_pred --EEECCCCCCCChHHHHHHHHhcCCCEEEEECCCCCcChhHHHHHHHHHH
Confidence 999999999999999999986 8999999999999998774
No 12
>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional
Probab=99.96 E-value=2.1e-28 Score=249.60 Aligned_cols=169 Identities=23% Similarity=0.411 Sum_probs=143.6
Q ss_pred HHHH-HHHHHHHHHHHHHHHhhhcccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCc-CCCCC
Q 025906 29 NRSL-VLLHFTSLAFLVYYRVSYFFQVSNARAAPLLPWLLVFAAELLLSFQWLLGIAYRWRPISRTVFPERLPE-ADQLP 106 (246)
Q Consensus 29 ~R~~-~~~~l~~~~~Yl~wR~~~tl~~~~~~~~~~~~wi~l~~aE~~~~~~~lL~~~~~~~p~~r~~~~~~l~~-~~~~P 106 (246)
.|++ +++.+++.++|++||++.|+|..+ ..+.+++++++++|+|+.+..+++++..+++..|++.+ ++. .+.+|
T Consensus 185 ~~~~l~~l~~~~~~rY~~WR~~~tL~~~~--~~~~~~~~~ll~ae~~~~~~~~lg~~~~~~~~~r~~~~--~~~~~~~~P 260 (852)
T PRK11498 185 SALMLIVLSLTVSCRYIWWRYTSTLNWDD--PVSLVCGLILLFAETYAWIVLVLGYFQVVWPLNRQPVP--LPKDMSLWP 260 (852)
T ss_pred HHHHHHHHHHHHHHHHHHHHHheeeCCCc--hHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCC--CCcccCCCC
Confidence 3444 444445568999999999998743 47788999999999999999888888887777776432 232 45689
Q ss_pred ceeEEEeccCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHHcCCCcCCCccc
Q 025906 107 GIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICPEAY 186 (246)
Q Consensus 107 ~Vdv~V~tyNp~~E~~~vv~~Tl~~~~~ldYP~~kl~vyvlDDG~~d~t~~~~~ea~~~a~~w~~lc~~~gv~~r~p~~Y 186 (246)
+|||+||||| |+.+++++|+.+++++|||+++++|||+|||++| +.+ ++|+++||+ |
T Consensus 261 ~VsViIPtYN---E~~~vv~~tI~a~l~~dYP~~k~EViVVDDgS~D-------~t~-------~la~~~~v~------y 317 (852)
T PRK11498 261 TVDIFVPTYN---EDLNVVKNTIYASLGIDWPKDKLNIWILDDGGRE-------EFR-------QFAQEVGVK------Y 317 (852)
T ss_pred cEEEEEecCC---CcHHHHHHHHHHHHhccCCCCceEEEEEeCCCCh-------HHH-------HHHHHCCcE------E
Confidence 9999999999 9989999999999999999999999999999999 433 788999999 9
Q ss_pred eeCCCCCCCCCCchhhHHHH---------HHHHHHHHHHHHHHHHhh
Q 025906 187 FSDPENGDGDSGNAEFIVER---------EKIKEKYTEFKERVTRAI 224 (246)
Q Consensus 187 ~~r~~~~~aKaGnln~a~~~---------~~~~~~y~~f~~ri~~~~ 224 (246)
++|++|.|+||||+|+|+.. |+|..+..+|+.++.+.+
T Consensus 318 I~R~~n~~gKAGnLN~aL~~a~GEyIavlDAD~ip~pdfL~~~V~~f 364 (852)
T PRK11498 318 IARPTHEHAKAGNINNALKYAKGEFVAIFDCDHVPTRSFLQMTMGWF 364 (852)
T ss_pred EEeCCCCcchHHHHHHHHHhCCCCEEEEECCCCCCChHHHHHHHHHH
Confidence 99999999999999999986 999999999999998754
No 13
>PRK05454 glucosyltransferase MdoH; Provisional
Probab=99.72 E-value=1.2e-16 Score=161.02 Aligned_cols=186 Identities=14% Similarity=0.091 Sum_probs=130.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcccCCCCCcchhHH---HHHHHHHHHHHHHHHHHHHHHhhcccCCCCCC-C--CCCc
Q 025906 28 INRSLVLLHFTSLAFLVYYRVSYFFQVSNARAAPLLP---WLLVFAAELLLSFQWLLGIAYRWRPISRTVFP-E--RLPE 101 (246)
Q Consensus 28 ~~R~~~~~~l~~~~~Yl~wR~~~tl~~~~~~~~~~~~---wi~l~~aE~~~~~~~lL~~~~~~~p~~r~~~~-~--~l~~ 101 (246)
+.|+++++..++...|..|+.+.+++..+.......+ ..+++..+.+++...+++++...+...+...+ + ..+.
T Consensus 40 ~rr~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~lf~~~~~w~~~~~~~a~~g~~~~~~~~~~~~~~~~~~~~~~ 119 (691)
T PRK05454 40 LRRLILLGLTLAQTAVATWEMKAVLPYGGWTLLEPALLVLFALLFAWISLGFWTALMGFLQLLRGRDKYSISASAAGDPP 119 (691)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccCCcccccCCC
Confidence 6677777777778899999999999764432222222 23345667777666677766543321111110 0 0111
Q ss_pred CCCCCceeEEEeccCCCCCChHH----HHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHHcC
Q 025906 102 ADQLPGIDVFICTADPTKEPTVE----VMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFG 177 (246)
Q Consensus 102 ~~~~P~Vdv~V~tyNp~~E~~~v----v~~Tl~~~~~ldYP~~kl~vyvlDDG~~d~t~~~~~ea~~~a~~w~~lc~~~g 177 (246)
.+..|.|+|+||+|| |+++. ++.++.++.+.+||. +++|+|+|||++|.+...- | +.|.++|++++
T Consensus 120 ~~~~~~VaVliP~yN---Ed~~~v~~~L~a~~~Sl~~~~~~~-~~e~~vLdD~~d~~~~~~e-~-----~~~~~L~~~~~ 189 (691)
T PRK05454 120 PPPEARTAILMPIYN---EDPARVFAGLRAMYESLAATGHGA-HFDFFILSDTRDPDIAAAE-E-----AAWLELRAELG 189 (691)
T ss_pred CCCCCceEEEEeCCC---CChHHHHHHHHHHHHHHHhcCCCC-CEEEEEEECCCChhHHHHH-H-----HHHHHHHHhcC
Confidence 345799999999999 99865 455556666689985 8999999999999654321 1 23668999986
Q ss_pred CCcCCCccceeCCCCCCCCCCchhhHHHH-----------HHHHHHHHHHHHHHHHhhc
Q 025906 178 IKTICPEAYFSDPENGDGDSGNAEFIVER-----------EKIKEKYTEFKERVTRAIE 225 (246)
Q Consensus 178 v~~r~p~~Y~~r~~~~~aKaGnln~a~~~-----------~~~~~~y~~f~~ri~~~~~ 225 (246)
- .....|.+|+.|.++||||+|.+.++ |+|..+..|++.++.+.++
T Consensus 190 ~--~~~i~yr~R~~n~~~KaGNl~~~~~~~~~~~eyivvLDADs~m~~d~L~~lv~~m~ 246 (691)
T PRK05454 190 G--EGRIFYRRRRRNVGRKAGNIADFCRRWGGAYDYMVVLDADSLMSGDTLVRLVRLME 246 (691)
T ss_pred C--CCcEEEEECCcCCCccHHHHHHHHHhcCCCcCEEEEEcCCCCCCHHHHHHHHHHHh
Confidence 2 33466999999999999999988765 8999999999999997653
No 14
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.52 E-value=5.7e-14 Score=131.28 Aligned_cols=102 Identities=21% Similarity=0.302 Sum_probs=82.9
Q ss_pred CCceeEEEeccCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHHcC--CCcCC
Q 025906 105 LPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFG--IKTIC 182 (246)
Q Consensus 105 ~P~Vdv~V~tyNp~~E~~~vv~~Tl~~~~~ldYP~~kl~vyvlDDG~~d~t~~~~~ea~~~a~~w~~lc~~~g--v~~r~ 182 (246)
.|.|||+||+|| |+++++++|+.++.++||| +++|+|+|||++|.|.+.+.+ .+.+++ +.
T Consensus 53 ~p~vsviiP~yn---E~~~~~~~~l~s~~~~dyp--~~evivv~d~~~d~~~~~~~~----------~~~~~~~~~~--- 114 (439)
T COG1215 53 LPKVSVIIPAYN---EEPEVLEETLESLLSQDYP--RYEVIVVDDGSTDETYEILEE----------LGAEYGPNFR--- 114 (439)
T ss_pred CCceEEEEecCC---CchhhHHHHHHHHHhCCCC--CceEEEECCCCChhHHHHHHH----------HHhhcCcceE---
Confidence 599999999999 9988999999999999999 699999999999966555544 234442 11
Q ss_pred CccceeCCCCCCCCCCchhhHHHH---------HHHHHHHHHHHHHHHHhhccC
Q 025906 183 PEAYFSDPENGDGDSGNAEFIVER---------EKIKEKYTEFKERVTRAIEKW 227 (246)
Q Consensus 183 p~~Y~~r~~~~~aKaGnln~a~~~---------~~~~~~y~~f~~ri~~~~~~~ 227 (246)
-...+.+.+.|+|++|+++.. |+|-.+..|++.+....+.+.
T Consensus 115 ---~~~~~~~~~gK~~al~~~l~~~~~d~V~~~DaD~~~~~d~l~~~~~~f~~~ 165 (439)
T COG1215 115 ---VIYPEKKNGGKAGALNNGLKRAKGDVVVILDADTVPEPDALRELVSPFEDP 165 (439)
T ss_pred ---EEeccccCccchHHHHHHHhhcCCCEEEEEcCCCCCChhHHHHHHhhhcCC
Confidence 111135678899999999986 899999999999999988754
No 15
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111. Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602).
Probab=99.52 E-value=7.2e-14 Score=133.64 Aligned_cols=131 Identities=13% Similarity=0.162 Sum_probs=93.7
Q ss_pred HHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCcCCCCCceeEEEeccCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEc
Q 025906 69 FAAELLLSFQWLLGIAYRWRPISRTVFPERLPEADQLPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSD 148 (246)
Q Consensus 69 ~~aE~~~~~~~lL~~~~~~~p~~r~~~~~~l~~~~~~P~Vdv~V~tyNp~~E~~~vv~~Tl~~~~~ldYP~~kl~vyvlD 148 (246)
++.|++.++..++....+.+ +.+ + ....+..|+|+|+||+|| |+ +.+.++|.++.+++||.++++|+|+|
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~---~~~-~--~~~~~~~P~vsVIIP~yN---e~-~~l~~~l~sl~~q~yp~~~~eIiVVD 87 (439)
T TIGR03111 18 IIVEIIPAVGGFIILLRKYR---HKK-R--LKFIGKLPDITIIIPVYN---SE-DTLFNCIESIYNQTYPIELIDIILAN 87 (439)
T ss_pred HHHHHHHHHHHHHHHHHHhc---ccc-c--cCCcCCCCCEEEEEEeCC---Ch-HHHHHHHHHHHhcCCCCCCeEEEEEE
Confidence 35566665555444333212 111 1 111356899999999999 88 89999999999999999889999999
Q ss_pred CCCCcccHHHHHHHHHHhhchHHHHHHcCCCcCCCccceeCCCCCCCCCCchhhHHHH---------HHHHHHHHHHHHH
Q 025906 149 DGGASITLLGMREAWKFARSWLPFCKRFGIKTICPEAYFSDPENGDGDSGNAEFIVER---------EKIKEKYTEFKER 219 (246)
Q Consensus 149 DG~~d~t~~~~~ea~~~a~~w~~lc~~~gv~~r~p~~Y~~r~~~~~aKaGnln~a~~~---------~~~~~~y~~f~~r 219 (246)
|||+|.|.+.+++++ +++... ++...+..+.|++++|.|++. |+|-.+..+++.+
T Consensus 88 d~StD~T~~il~~~~----------~~~~~v------~v~~~~~~~Gka~AlN~gl~~s~g~~v~~~DaD~~~~~d~L~~ 151 (439)
T TIGR03111 88 NQSTDDSFQVFCRAQ----------NEFPGL------SLRYMNSDQGKAKALNAAIYNSIGKYIIHIDSDGKLHKDAIKN 151 (439)
T ss_pred CCCChhHHHHHHHHH----------HhCCCe------EEEEeCCCCCHHHHHHHHHHHccCCEEEEECCCCCcChHHHHH
Confidence 999998877766543 333322 343333447899999999976 7777788888888
Q ss_pred HHHhhc
Q 025906 220 VTRAIE 225 (246)
Q Consensus 220 i~~~~~ 225 (246)
+...++
T Consensus 152 l~~~f~ 157 (439)
T TIGR03111 152 MVTRFE 157 (439)
T ss_pred HHHHHH
Confidence 887664
No 16
>PRK14583 hmsR N-glycosyltransferase; Provisional
Probab=99.42 E-value=1.3e-12 Score=125.08 Aligned_cols=100 Identities=12% Similarity=0.110 Sum_probs=80.2
Q ss_pred CCCCCceeEEEeccCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHHc-CCCc
Q 025906 102 ADQLPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRF-GIKT 180 (246)
Q Consensus 102 ~~~~P~Vdv~V~tyNp~~E~~~vv~~Tl~~~~~ldYP~~kl~vyvlDDG~~d~t~~~~~ea~~~a~~w~~lc~~~-gv~~ 180 (246)
.+..|.|+|+||+|| |+ ..+++|+.++++.+|| +++|+|+|||++|.|.+.+.+ +++++ ++.
T Consensus 71 ~~~~p~vsViIP~yN---E~-~~i~~~l~sll~q~yp--~~eIivVdDgs~D~t~~~~~~----------~~~~~~~v~- 133 (444)
T PRK14583 71 LKGHPLVSILVPCFN---EG-LNARETIHAALAQTYT--NIEVIAINDGSSDDTAQVLDA----------LLAEDPRLR- 133 (444)
T ss_pred cCCCCcEEEEEEeCC---CH-HHHHHHHHHHHcCCCC--CeEEEEEECCCCccHHHHHHH----------HHHhCCCEE-
Confidence 345799999999999 88 6789999999999999 699999999999988766554 33444 344
Q ss_pred CCCccceeCCCCCCCCCCchhhHHHH---------HHHHHHHHHHHHHHHHhh
Q 025906 181 ICPEAYFSDPENGDGDSGNAEFIVER---------EKIKEKYTEFKERVTRAI 224 (246)
Q Consensus 181 r~p~~Y~~r~~~~~aKaGnln~a~~~---------~~~~~~y~~f~~ri~~~~ 224 (246)
++..+.|. .|++++|.++.. |+|-.+-.+++.+..+.+
T Consensus 134 -----vv~~~~n~-Gka~AlN~gl~~a~~d~iv~lDAD~~~~~d~L~~lv~~~ 180 (444)
T PRK14583 134 -----VIHLAHNQ-GKAIALRMGAAAARSEYLVCIDGDALLDKNAVPYLVAPL 180 (444)
T ss_pred -----EEEeCCCC-CHHHHHHHHHHhCCCCEEEEECCCCCcCHHHHHHHHHHH
Confidence 66666554 489999999875 788888888888887654
No 17
>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan. Periplasmic Glucan Biosynthesis protein ModH is a glucosyltransferase that catalyzes the elongation of beta-1,2 polyglucose chains of glucan, requiring a beta-glucoside as a primer and UDP-glucose as a substrate. Glucans are composed of 5 to 10 units of glucose forming a highly branched structure, where beta-1,2-linked glucose constitutes a linear backbone to which branches are attached by beta-1,6 linkages. In Escherichia coli, glucans are located in the periplasmic space, functioning as regulator of osmolarity. It is synthesized at a maximum when cells are grown in a medium with low osmolarity. It has been shown to span the cytoplasmic membrane.
Probab=99.37 E-value=7.6e-13 Score=118.69 Aligned_cols=106 Identities=17% Similarity=0.248 Sum_probs=81.6
Q ss_pred eeEEEeccCCCCCChHHHHHHHHHHhc----CCCCCCCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHHcCCCcCCC
Q 025906 108 IDVFICTADPTKEPTVEVMNTVLSAMA----LDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICP 183 (246)
Q Consensus 108 Vdv~V~tyNp~~E~~~vv~~Tl~~~~~----ldYP~~kl~vyvlDDG~~d~t~~~~~ea~~~a~~w~~lc~~~gv~~r~p 183 (246)
|+|+||+|| |+++++.+||.++.. .+|+. +++|||+|||+++.... .| ++.|..+|++++- ...
T Consensus 1 ~SIliP~~n---e~~~~l~~~l~~~~~~~~~~~~~~-~~eI~vldD~~d~~~~~--~~----~~~~~~l~~~~~~--~~~ 68 (254)
T cd04191 1 TAIVMPVYN---EDPARVFAGLRAMYESLAKTGLAD-HFDFFILSDTRDPDIWL--AE----EAAWLDLCEELGA--QGR 68 (254)
T ss_pred CEEEEeCCC---CCHHHHHHHHHHHHHHHHhcCCcC-ceEEEEECCCCChHHHH--HH----HHHHHHHHHHhCC--CCc
Confidence 789999999 999999999999775 46622 79999999999872211 11 1235568887641 122
Q ss_pred ccceeCCCCCCCCCCchhhHHHH-----------HHHHHHHHHHHHHHHHhhc
Q 025906 184 EAYFSDPENGDGDSGNAEFIVER-----------EKIKEKYTEFKERVTRAIE 225 (246)
Q Consensus 184 ~~Y~~r~~~~~aKaGnln~a~~~-----------~~~~~~y~~f~~ri~~~~~ 225 (246)
..|.+|+.|.|+||||+|+++.. |+|..+-.+++.++...+.
T Consensus 69 v~~~~r~~~~g~Kag~l~~~~~~~~~~~~~i~~~DaD~~~~p~~l~~~v~~~~ 121 (254)
T cd04191 69 IYYRRRRENTGRKAGNIADFCRRWGSRYDYMVVLDADSLMSGDTIVRLVRRME 121 (254)
T ss_pred EEEEEcCCCCCccHHHHHHHHHHhCCCCCEEEEEeCCCCCCHHHHHHHHHHHH
Confidence 34999999999999999999864 7888888999999998764
No 18
>PRK11204 N-glycosyltransferase; Provisional
Probab=99.36 E-value=5.1e-12 Score=118.91 Aligned_cols=100 Identities=15% Similarity=0.188 Sum_probs=81.8
Q ss_pred CCCCCceeEEEeccCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHHcC-CCc
Q 025906 102 ADQLPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFG-IKT 180 (246)
Q Consensus 102 ~~~~P~Vdv~V~tyNp~~E~~~vv~~Tl~~~~~ldYP~~kl~vyvlDDG~~d~t~~~~~ea~~~a~~w~~lc~~~g-v~~ 180 (246)
....|.|+|+||+|| |+ +.+++|+.++++.+|| +.+|+|+|||++|.|.+.+.+ +++++. +.
T Consensus 50 ~~~~p~vsViIp~yn---e~-~~i~~~l~sl~~q~yp--~~eiiVvdD~s~d~t~~~l~~----------~~~~~~~v~- 112 (420)
T PRK11204 50 LKEYPGVSILVPCYN---EG-ENVEETISHLLALRYP--NYEVIAINDGSSDNTGEILDR----------LAAQIPRLR- 112 (420)
T ss_pred cCCCCCEEEEEecCC---CH-HHHHHHHHHHHhCCCC--CeEEEEEECCCCccHHHHHHH----------HHHhCCcEE-
Confidence 356799999999999 87 7899999999999999 789999999999987666554 445543 55
Q ss_pred CCCccceeCCCCCCCCCCchhhHHHH---------HHHHHHHHHHHHHHHHhh
Q 025906 181 ICPEAYFSDPENGDGDSGNAEFIVER---------EKIKEKYTEFKERVTRAI 224 (246)
Q Consensus 181 r~p~~Y~~r~~~~~aKaGnln~a~~~---------~~~~~~y~~f~~ri~~~~ 224 (246)
++.++.|.+ |++++|.+.+. |+|-.+-.+++.++.+.+
T Consensus 113 -----~i~~~~n~G-ka~aln~g~~~a~~d~i~~lDaD~~~~~d~L~~l~~~~ 159 (420)
T PRK11204 113 -----VIHLAENQG-KANALNTGAAAARSEYLVCIDGDALLDPDAAAYMVEHF 159 (420)
T ss_pred -----EEEcCCCCC-HHHHHHHHHHHcCCCEEEEECCCCCCChhHHHHHHHHH
Confidence 887777754 99999999876 777777788888888765
No 19
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.
Probab=99.29 E-value=6e-12 Score=107.08 Aligned_cols=101 Identities=31% Similarity=0.476 Sum_probs=80.2
Q ss_pred CceeEEEeccCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHHcCCCcCCCcc
Q 025906 106 PGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICPEA 185 (246)
Q Consensus 106 P~Vdv~V~tyNp~~E~~~vv~~Tl~~~~~ldYP~~kl~vyvlDDG~~d~t~~~~~ea~~~a~~w~~lc~~~gv~~r~p~~ 185 (246)
|+|+|+||+|| |+++.+++++.++++.+||.++++|+|+|||++|.|.+.+.+ ++.+..+.
T Consensus 1 p~vsviip~~n---~~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~----------~~~~~~~~------ 61 (234)
T cd06421 1 PTVDVFIPTYN---EPLEIVRKTLRAALAIDYPHDKLRVYVLDDGRRPELRALAAE----------LGVEYGYR------ 61 (234)
T ss_pred CceEEEEecCC---CcHHHHHHHHHHHHhcCCCcccEEEEEEcCCCchhHHHHHHH----------hhcccCce------
Confidence 78999999999 887899999999999999987799999999999965444332 33444445
Q ss_pred ceeCCCCCCCCCCchhhHHHH---------HHHHHHHHHHHHHHHHhhc
Q 025906 186 YFSDPENGDGDSGNAEFIVER---------EKIKEKYTEFKERVTRAIE 225 (246)
Q Consensus 186 Y~~r~~~~~aKaGnln~a~~~---------~~~~~~y~~f~~ri~~~~~ 225 (246)
|+.++.|.+.|+||+|.+++. ++|-..-.+++.++...+.
T Consensus 62 ~~~~~~~~~~~~~~~n~~~~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~ 110 (234)
T cd06421 62 YLTRPDNRHAKAGNLNNALAHTTGDFVAILDADHVPTPDFLRRTLGYFL 110 (234)
T ss_pred EEEeCCCCCCcHHHHHHHHHhCCCCEEEEEccccCcCccHHHHHHHHHh
Confidence 898888889999999999875 4555555677777776553
No 20
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano
Probab=99.23 E-value=5e-11 Score=111.61 Aligned_cols=102 Identities=14% Similarity=0.178 Sum_probs=79.3
Q ss_pred CCCCceeEEEeccCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHHc---CCC
Q 025906 103 DQLPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRF---GIK 179 (246)
Q Consensus 103 ~~~P~Vdv~V~tyNp~~E~~~vv~~Tl~~~~~ldYP~~kl~vyvlDDG~~d~t~~~~~ea~~~a~~w~~lc~~~---gv~ 179 (246)
...|+|+|+||+|| |+ +.+++++.+++++||| .++|+|+||+++|.|.+.+++. .+++ .|+
T Consensus 38 ~~~p~VSViiP~~n---ee-~~l~~~L~Sl~~q~Yp--~~EIivvdd~s~D~t~~iv~~~----------~~~~p~~~i~ 101 (373)
T TIGR03472 38 RAWPPVSVLKPLHG---DE-PELYENLASFCRQDYP--GFQMLFGVQDPDDPALAVVRRL----------RADFPDADID 101 (373)
T ss_pred CCCCCeEEEEECCC---CC-hhHHHHHHHHHhcCCC--CeEEEEEeCCCCCcHHHHHHHH----------HHhCCCCceE
Confidence 34799999999999 88 5799999999999999 5999999999999777665543 2333 344
Q ss_pred cCCCccceeCCCCCC--CCCCchhhHHHH---------HHHHHHHHHHHHHHHHhhcc
Q 025906 180 TICPEAYFSDPENGD--GDSGNAEFIVER---------EKIKEKYTEFKERVTRAIEK 226 (246)
Q Consensus 180 ~r~p~~Y~~r~~~~~--aKaGnln~a~~~---------~~~~~~y~~f~~ri~~~~~~ 226 (246)
++..+.+.+ .|++|++++.+. |+|-..-.+++.++.+.+++
T Consensus 102 ------~v~~~~~~G~~~K~~~l~~~~~~a~ge~i~~~DaD~~~~p~~L~~lv~~~~~ 153 (373)
T TIGR03472 102 ------LVIDARRHGPNRKVSNLINMLPHARHDILVIADSDISVGPDYLRQVVAPLAD 153 (373)
T ss_pred ------EEECCCCCCCChHHHHHHHHHHhccCCEEEEECCCCCcChhHHHHHHHHhcC
Confidence 776665544 477788777543 77888889999999887754
No 21
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex. Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants we
Probab=99.21 E-value=3.7e-11 Score=103.49 Aligned_cols=104 Identities=19% Similarity=0.208 Sum_probs=82.6
Q ss_pred CceeEEEeccCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHHcCCCcCCCcc
Q 025906 106 PGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICPEA 185 (246)
Q Consensus 106 P~Vdv~V~tyNp~~E~~~vv~~Tl~~~~~ldYP~~kl~vyvlDDG~~d~t~~~~~ea~~~a~~w~~lc~~~gv~~r~p~~ 185 (246)
|+|+|+||+|| |+ +.|.++|.++++++||.++++|+|+|| |+|.|.+.+++..+ .+ ......+.
T Consensus 1 p~vSViIp~yN---e~-~~l~~~L~sl~~q~~~~~~~eIiVvD~-s~D~t~~~~~~~~~---~~--~~~~~~i~------ 64 (232)
T cd06437 1 PMVTVQLPVFN---EK-YVVERLIEAACALDYPKDRLEIQVLDD-STDETVRLAREIVE---EY--AAQGVNIK------ 64 (232)
T ss_pred CceEEEEecCC---cH-HHHHHHHHHHHhcCCCccceEEEEEEC-CCCcHHHHHHHHHH---HH--hhcCCceE------
Confidence 67999999999 87 799999999999999988899999998 88988888776431 11 01123344
Q ss_pred ceeCCCCCCCCCCchhhHHHH---------HHHHHHHHHHHHHHHHhhc
Q 025906 186 YFSDPENGDGDSGNAEFIVER---------EKIKEKYTEFKERVTRAIE 225 (246)
Q Consensus 186 Y~~r~~~~~aKaGnln~a~~~---------~~~~~~y~~f~~ri~~~~~ 225 (246)
++.+.++.+.|++++|.+.+. |+|-.+..+++.++...+.
T Consensus 65 ~~~~~~~~G~k~~a~n~g~~~a~~~~i~~~DaD~~~~~~~l~~~~~~~~ 113 (232)
T cd06437 65 HVRRADRTGYKAGALAEGMKVAKGEYVAIFDADFVPPPDFLQKTPPYFA 113 (232)
T ss_pred EEECCCCCCCchHHHHHHHHhCCCCEEEEEcCCCCCChHHHHHhhhhhc
Confidence 888888878889999999875 7777788889888877664
No 22
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily. This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.
Probab=99.10 E-value=8.3e-11 Score=101.88 Aligned_cols=102 Identities=21% Similarity=0.322 Sum_probs=81.1
Q ss_pred CCCCCceeEEEeccCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHHcCCCcC
Q 025906 102 ADQLPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTI 181 (246)
Q Consensus 102 ~~~~P~Vdv~V~tyNp~~E~~~vv~~Tl~~~~~ldYP~~kl~vyvlDDG~~d~t~~~~~ea~~~a~~w~~lc~~~gv~~r 181 (246)
.+..|.|+|+||+|| |+ +.+.++|.++.+.+||.++++|+|+|||++|.|.+.+++ ++++ ++.
T Consensus 25 ~~~~~~isVvip~~n---~~-~~l~~~l~si~~q~~~~~~~eiivvdd~s~d~t~~~~~~----------~~~~-~v~-- 87 (251)
T cd06439 25 PAYLPTVTIIIPAYN---EE-AVIEAKLENLLALDYPRDRLEIIVVSDGSTDGTAEIARE----------YADK-GVK-- 87 (251)
T ss_pred CCCCCEEEEEEecCC---cH-HHHHHHHHHHHhCcCCCCcEEEEEEECCCCccHHHHHHH----------HhhC-cEE--
Confidence 456899999999999 77 789999999999999987799999999999977665443 3343 566
Q ss_pred CCccceeCCCCCCCCCCchhhHHHH---------HHHHHHHHHHHHHHHHhhc
Q 025906 182 CPEAYFSDPENGDGDSGNAEFIVER---------EKIKEKYTEFKERVTRAIE 225 (246)
Q Consensus 182 ~p~~Y~~r~~~~~aKaGnln~a~~~---------~~~~~~y~~f~~ri~~~~~ 225 (246)
++..+.|. .|++++|.+.+. |+|-.+-.+++.++.+..+
T Consensus 88 ----~i~~~~~~-g~~~a~n~gi~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~ 135 (251)
T cd06439 88 ----LLRFPERR-GKAAALNRALALATGEIVVFTDANALLDPDALRLLVRHFA 135 (251)
T ss_pred ----EEEcCCCC-ChHHHHHHHHHHcCCCEEEEEccccCcCHHHHHHHHHHhc
Confidence 77776664 477889988876 6666666888888887764
No 23
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.
Probab=99.05 E-value=1.6e-09 Score=101.92 Aligned_cols=55 Identities=29% Similarity=0.337 Sum_probs=49.1
Q ss_pred CCCCCceeEEEeccCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHH
Q 025906 102 ADQLPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMRE 161 (246)
Q Consensus 102 ~~~~P~Vdv~V~tyNp~~E~~~vv~~Tl~~~~~ldYP~~kl~vyvlDDG~~d~t~~~~~e 161 (246)
++..|+|+|+||+|| |+ +.+.+++.++++.+||. +++|+|+||||+|.|.+.+++
T Consensus 36 ~~~~p~VSVIIpa~N---e~-~~L~~~L~sL~~q~yp~-~~eIIVVDd~StD~T~~i~~~ 90 (384)
T TIGR03469 36 PEAWPAVVAVVPARN---EA-DVIGECVTSLLEQDYPG-KLHVILVDDHSTDGTADIARA 90 (384)
T ss_pred CCCCCCEEEEEecCC---cH-hHHHHHHHHHHhCCCCC-ceEEEEEeCCCCCcHHHHHHH
Confidence 456899999999999 87 89999999999999996 589999999999988777665
No 24
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response.
Probab=98.98 E-value=1.7e-09 Score=92.84 Aligned_cols=99 Identities=21% Similarity=0.348 Sum_probs=74.3
Q ss_pred eEEEeccCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHHcCCCcCCCcccee
Q 025906 109 DVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICPEAYFS 188 (246)
Q Consensus 109 dv~V~tyNp~~E~~~vv~~Tl~~~~~ldYP~~kl~vyvlDDG~~d~t~~~~~ea~~~a~~w~~lc~~~gv~~r~p~~Y~~ 188 (246)
+|+||+|| |+++.|++++.++.+++|| +.+|+|+|||++|.|.....+ .+|++++.+ ..++.
T Consensus 1 siiip~~n---e~~~~l~~~l~sl~~q~~~--~~eiiVvdd~s~D~t~~~~i~---------~~~~~~~~~----i~~i~ 62 (236)
T cd06435 1 SIHVPCYE---EPPEMVKETLDSLAALDYP--NFEVIVIDNNTKDEALWKPVE---------AHCAQLGER----FRFFH 62 (236)
T ss_pred CeeEeeCC---CcHHHHHHHHHHHHhCCCC--CcEEEEEeCCCCchhHHHHHH---------HHHHHhCCc----EEEEE
Confidence 58999999 8878999999999999999 689999999999977532111 456666533 22677
Q ss_pred CCCCCCCCCCchhhHHHH-----------HHHHHHHHHHHHHHHHhhc
Q 025906 189 DPENGDGDSGNAEFIVER-----------EKIKEKYTEFKERVTRAIE 225 (246)
Q Consensus 189 r~~~~~aKaGnln~a~~~-----------~~~~~~y~~f~~ri~~~~~ 225 (246)
...|.+.|+|++|.+.+. |+|-....+++.++...++
T Consensus 63 ~~~~~G~~~~a~n~g~~~a~~~~d~i~~lD~D~~~~~~~l~~l~~~~~ 110 (236)
T cd06435 63 VEPLPGAKAGALNYALERTAPDAEIIAVIDADYQVEPDWLKRLVPIFD 110 (236)
T ss_pred cCCCCCCchHHHHHHHHhcCCCCCEEEEEcCCCCcCHHHHHHHHHHhc
Confidence 777778889999988764 4455556677777765554
No 25
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis prot
Probab=98.96 E-value=1.2e-09 Score=95.00 Aligned_cols=101 Identities=15% Similarity=0.134 Sum_probs=74.3
Q ss_pred CceeEEEeccCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHHcCCCcCCCcc
Q 025906 106 PGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICPEA 185 (246)
Q Consensus 106 P~Vdv~V~tyNp~~E~~~vv~~Tl~~~~~ldYP~~kl~vyvlDDG~~d~t~~~~~ea~~~a~~w~~lc~~~gv~~r~p~~ 185 (246)
|.|+|+||+|| |+ +.+.++|.++++.+||.++++|+|+|||++|.|.+.+.+ ++....+. -.
T Consensus 1 p~vsIiIp~~N---e~-~~l~~~l~sl~~~~y~~~~~eiivVdd~s~d~t~~i~~~----------~~~~~~~~----i~ 62 (241)
T cd06427 1 PVYTILVPLYK---EA-EVLPQLIASLSALDYPRSKLDVKLLLEEDDEETIAAARA----------LRLPSIFR----VV 62 (241)
T ss_pred CeEEEEEecCC---cH-HHHHHHHHHHHhCcCCcccEEEEEEECCCCchHHHHHHH----------hccCCCee----EE
Confidence 78999999999 87 899999999999999988899999999999977665443 22211111 11
Q ss_pred ceeCCCCCCCCCCchhhHHHH---------HHHHHHHHHHHHHHHHhhc
Q 025906 186 YFSDPENGDGDSGNAEFIVER---------EKIKEKYTEFKERVTRAIE 225 (246)
Q Consensus 186 Y~~r~~~~~aKaGnln~a~~~---------~~~~~~y~~f~~ri~~~~~ 225 (246)
++... +...|++.+|.+++. |+|-....+++.++...+.
T Consensus 63 ~~~~~-~~~G~~~a~n~g~~~a~gd~i~~~DaD~~~~~~~l~~~~~~~~ 110 (241)
T cd06427 63 VVPPS-QPRTKPKACNYALAFARGEYVVIYDAEDAPDPDQLKKAVAAFA 110 (241)
T ss_pred EecCC-CCCchHHHHHHHHHhcCCCEEEEEcCCCCCChHHHHHHHHHHH
Confidence 33222 334677888988875 7777777888888887553
No 26
>PRK14716 bacteriophage N4 adsorption protein B; Provisional
Probab=98.95 E-value=6.9e-09 Score=101.84 Aligned_cols=101 Identities=10% Similarity=0.090 Sum_probs=74.1
Q ss_pred CCCCceeEEEeccCCCCCChHHHHHHHHHH-hcCCCCCCCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHHcC-CCc
Q 025906 103 DQLPGIDVFICTADPTKEPTVEVMNTVLSA-MALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFG-IKT 180 (246)
Q Consensus 103 ~~~P~Vdv~V~tyNp~~E~~~vv~~Tl~~~-~~ldYP~~kl~vyvlDDG~~d~t~~~~~ea~~~a~~w~~lc~~~g-v~~ 180 (246)
...|.|+|+||+|| |+ ++|.+||.++ .++||| +++|+|+||+++|.|.+.+.++ ++++. ++
T Consensus 63 ~~~p~vaIlIPA~N---E~-~vI~~~l~s~L~~ldY~--~~eIiVv~d~ndd~T~~~v~~l----------~~~~p~v~- 125 (504)
T PRK14716 63 VPEKRIAIFVPAWR---EA-DVIGRMLEHNLATLDYE--NYRIFVGTYPNDPATLREVDRL----------AARYPRVH- 125 (504)
T ss_pred CCCCceEEEEeccC---ch-hHHHHHHHHHHHcCCCC--CeEEEEEECCCChhHHHHHHHH----------HHHCCCeE-
Confidence 44899999999999 98 8999999986 589998 8999999999999887776653 35543 32
Q ss_pred CCCccceeCCCCCCCCCCchhhHHHH------------------HHHHHHHHHHHHHHHHhh
Q 025906 181 ICPEAYFSDPENGDGDSGNAEFIVER------------------EKIKEKYTEFKERVTRAI 224 (246)
Q Consensus 181 r~p~~Y~~r~~~~~aKaGnln~a~~~------------------~~~~~~y~~f~~ri~~~~ 224 (246)
..+....++..|++|+|+++.. |++-....++++..+..+
T Consensus 126 ----~vv~~~~gp~~Ka~aLN~~l~~~~~~e~~~G~~~d~vvi~DAD~~v~Pd~Lr~~~~~~ 183 (504)
T PRK14716 126 ----LVIVPHDGPTSKADCLNWIYQAIFAFERERGIRFAIIVLHDAEDVIHPLELRLYNYLL 183 (504)
T ss_pred ----EEEeCCCCCCCHHHHHHHHHHHHHHhhhhcCCCcCEEEEEcCCCCcCccHHHHHHhhc
Confidence 1222333456899999999753 445555566666665444
No 27
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis. UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.
Probab=98.88 E-value=3.9e-09 Score=89.10 Aligned_cols=97 Identities=12% Similarity=0.185 Sum_probs=68.9
Q ss_pred CceeEEEeccCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHHcC---CCcCC
Q 025906 106 PGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFG---IKTIC 182 (246)
Q Consensus 106 P~Vdv~V~tyNp~~E~~~vv~~Tl~~~~~ldYP~~kl~vyvlDDG~~d~t~~~~~ea~~~a~~w~~lc~~~g---v~~r~ 182 (246)
|.|+|+||+|| |+ ..+.++|.++++.+|| +++|+|+|||++|.|.+.+.+ +++++. +.
T Consensus 1 p~vsviip~~n---~~-~~l~~~L~sl~~q~~~--~~eiivVdd~s~d~t~~~~~~----------~~~~~~~~~~~--- 61 (196)
T cd02520 1 PGVSILKPLCG---VD-PNLYENLESFFQQDYP--KYEILFCVQDEDDPAIPVVRK----------LIAKYPNVDAR--- 61 (196)
T ss_pred CCeEEEEecCC---CC-ccHHHHHHHHHhccCC--CeEEEEEeCCCcchHHHHHHH----------HHHHCCCCcEE---
Confidence 67999999999 77 4689999999999999 599999999999977766554 334443 33
Q ss_pred CccceeCCCCCC--CCCCchhhHHHH---------HHHHHHHHHHHHHHHHhh
Q 025906 183 PEAYFSDPENGD--GDSGNAEFIVER---------EKIKEKYTEFKERVTRAI 224 (246)
Q Consensus 183 p~~Y~~r~~~~~--aKaGnln~a~~~---------~~~~~~y~~f~~ri~~~~ 224 (246)
++....+.+ +|++|+|.+.+. |+|-..-.+++.+....+
T Consensus 62 ---~~~~~~~~g~~~~~~~~n~g~~~a~~d~i~~~D~D~~~~~~~l~~l~~~~ 111 (196)
T cd02520 62 ---LLIGGEKVGINPKVNNLIKGYEEARYDILVISDSDISVPPDYLRRMVAPL 111 (196)
T ss_pred ---EEecCCcCCCCHhHHHHHHHHHhCCCCEEEEECCCceEChhHHHHHHHHh
Confidence 555554433 466788888753 444444455665555543
No 28
>PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=98.83 E-value=1.2e-08 Score=104.09 Aligned_cols=84 Identities=14% Similarity=0.256 Sum_probs=64.1
Q ss_pred CCCCCceeEEEeccCCCCCChHHHHHHHHHHh-cCCCCCCCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHHcC-CC
Q 025906 102 ADQLPGIDVFICTADPTKEPTVEVMNTVLSAM-ALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFG-IK 179 (246)
Q Consensus 102 ~~~~P~Vdv~V~tyNp~~E~~~vv~~Tl~~~~-~ldYP~~kl~vyvlDDG~~d~t~~~~~ea~~~a~~w~~lc~~~g-v~ 179 (246)
.+..|.|+|+||+|| |+ .++.+|+.+++ ++||| +++|+|++|++++.|.+.+. .+|++++ +.
T Consensus 59 ~~~~~~vsIlVPa~n---E~-~vi~~~i~~ll~~ldYP--~~eI~vi~~~nD~~T~~~~~----------~l~~~~p~~~ 122 (727)
T PRK11234 59 KPDEKPLAIMVPAWN---ET-GVIGNMAELAATTLDYE--NYHIFVGTYPNDPATQADVD----------AVCARFPNVH 122 (727)
T ss_pred cCCCCCEEEEEecCc---ch-hhHHHHHHHHHHhCCCC--CeEEEEEecCCChhHHHHHH----------HHHHHCCCcE
Confidence 355699999999999 98 89999999986 79999 69999999888776665544 4677775 21
Q ss_pred cCCCccceeCCCCCCCCCCchhhHHHH
Q 025906 180 TICPEAYFSDPENGDGDSGNAEFIVER 206 (246)
Q Consensus 180 ~r~p~~Y~~r~~~~~aKaGnln~a~~~ 206 (246)
.....++. +..|++++|++++.
T Consensus 123 ----~v~~~~~g-~~gKa~aLN~~l~~ 144 (727)
T PRK11234 123 ----KVVCARPG-PTSKADCLNNVLDA 144 (727)
T ss_pred ----EEEeCCCC-CCCHHHHHHHHHHH
Confidence 11234433 46799999998864
No 29
>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis. The Methylobacillus sp EpsO protein is predicted to participate in the methanolan synthesis. Methanolan is an exopolysaccharide (EPS), composed of glucose, mannose and galactose. A 21 genes cluster was predicted to participate in the methanolan synthesis. Gene disruption analysis revealed that EpsO is one of the glycosyltransferase enzymes involved in the synthesis of repeating sugar units onto the lipid carrier.
Probab=98.79 E-value=1e-08 Score=85.42 Aligned_cols=93 Identities=18% Similarity=0.209 Sum_probs=69.0
Q ss_pred EEEeccCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHHcCCCcCCCccceeC
Q 025906 110 VFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICPEAYFSD 189 (246)
Q Consensus 110 v~V~tyNp~~E~~~vv~~Tl~~~~~ldYP~~kl~vyvlDDG~~d~t~~~~~ea~~~a~~w~~lc~~~gv~~r~p~~Y~~r 189 (246)
|+||+|| |+ +.+.++|.++.+++||.++++|+|+||||+|.|.+ .+++++.. ++.+
T Consensus 1 VvIp~~n---e~-~~i~~~l~sl~~~~~p~~~~eiivvdd~s~D~t~~--------------~~~~~~~~------~~~~ 56 (183)
T cd06438 1 ILIPAHN---EE-AVIGNTVRSLKAQDYPRELYRIFVVADNCTDDTAQ--------------VARAAGAT------VLER 56 (183)
T ss_pred CEEeccc---hH-HHHHHHHHHHHhcCCCCcccEEEEEeCCCCchHHH--------------HHHHcCCe------EEEe
Confidence 6899999 88 89999999999999998889999999999996543 33445554 4444
Q ss_pred CC-CCCCCCCchhhHHHH--------------HHHHHHHHHHHHHHHHhhcc
Q 025906 190 PE-NGDGDSGNAEFIVER--------------EKIKEKYTEFKERVTRAIEK 226 (246)
Q Consensus 190 ~~-~~~aKaGnln~a~~~--------------~~~~~~y~~f~~ri~~~~~~ 226 (246)
.. ....|++++|++... |+|-..-.+++.+..+.+.+
T Consensus 57 ~~~~~~gk~~aln~g~~~a~~~~~~~d~v~~~DaD~~~~p~~l~~l~~~~~~ 108 (183)
T cd06438 57 HDPERRGKGYALDFGFRHLLNLADDPDAVVVFDADNLVDPNALEELNARFAA 108 (183)
T ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCCCEEEEEcCCCCCChhHHHHHHHHHhh
Confidence 32 234577778877643 55556667777777766644
No 30
>COG2943 MdoH Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=98.77 E-value=5.2e-07 Score=88.48 Aligned_cols=184 Identities=16% Similarity=0.176 Sum_probs=111.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCcchhHHHHHHHHHHHH-----HHHHHHHHHHHhhcccCCCCCCCC-CC
Q 025906 27 IINRSLVLLHFTSLAFLVYYRVSYFFQVSNARAAPLLPWLLVFAAELL-----LSFQWLLGIAYRWRPISRTVFPER-LP 100 (246)
Q Consensus 27 ~~~R~~~~~~l~~~~~Yl~wR~~~tl~~~~~~~~~~~~wi~l~~aE~~-----~~~~~lL~~~~~~~p~~r~~~~~~-l~ 100 (246)
.+.|++.+...++....-.|=...+++..+..... ..++.+++-++ .+-+.+.+++.......|..-.++ .|
T Consensus 62 ~lRR~~L~~~tla~tv~at~~m~~vl~~gG~~~le--~~iL~Lfa~lFcwvs~~F~tAl~GF~~L~~~~~r~~~~~p~~p 139 (736)
T COG2943 62 TLRRYILLGLTLAQTVVATWYMKTVLPYGGPYMLE--AGILVLFAVLFCWVSAGFWTALMGFLVLLFGRDRYLSIAPNEP 139 (736)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhccccCCccHHH--HHHHHHHHHHHHHHHHHHHHHHHHHhheeecCCCcCCCCCCCC
Confidence 36787777777776666666666777665542222 22222212111 122233344443333222211110 11
Q ss_pred cCCCCCceeEEEeccCCCCCChHHHHH----HHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHHc
Q 025906 101 EADQLPGIDVFICTADPTKEPTVEVMN----TVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRF 176 (246)
Q Consensus 101 ~~~~~P~Vdv~V~tyNp~~E~~~vv~~----Tl~~~~~ldYP~~kl~vyvlDDG~~d~t~~~~~ea~~~a~~w~~lc~~~ 176 (246)
-..+-+-.|++|+|| |++.-|-. |..++..-- -.+++.++|+.|..++. -.++|.+ .|..+|++.
T Consensus 140 -~p~~hrTAilmPiyn---Ed~~rVfAgLrA~~eSla~Tg-~~~~FD~FVLSDs~dpd--ialAEq~----a~~~l~~e~ 208 (736)
T COG2943 140 -LPDLHRTAILMPIYN---EDVNRVFAGLRATYESLAATG-HAEHFDFFVLSDSRDPD--IALAEQK----AWAELCREL 208 (736)
T ss_pred -CCcccceeEEeeccc---cCHHHHHHHHHHHHHHHHhhC-CcccceEEEEcCCCCch--hhhhHHH----HHHHHHHHh
Confidence 123446889999999 99876544 444444333 23589999999998872 2233433 466999999
Q ss_pred CCCcCCCccceeCCCCCCCCCCch-hhHHHH----------HHHHHHHHHHHHHHHHhhc
Q 025906 177 GIKTICPEAYFSDPENGDGDSGNA-EFIVER----------EKIKEKYTEFKERVTRAIE 225 (246)
Q Consensus 177 gv~~r~p~~Y~~r~~~~~aKaGnl-n~a~~~----------~~~~~~y~~f~~ri~~~~~ 225 (246)
|-+ +.-+|=.|.+|.+-||||+ ++...| |+|-++-+|=++|..++-+
T Consensus 209 ~g~--~~ifYRrRr~n~~RKaGNIaDfcrRwG~~Y~~MlVLDADSvMtgd~lvrLv~~ME 266 (736)
T COG2943 209 GGE--GNIFYRRRRRNVKRKAGNIADFCRRWGSAYSYMLVLDADSVMTGDCLVRLVRLME 266 (736)
T ss_pred CCC--CceeeehHhhhhcccccCHHHHHHHhCcccceEEEeecccccCchHHHHHHHHHh
Confidence 944 3355777889999999998 555555 8888899999999887753
No 31
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis. AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=98.67 E-value=3.6e-08 Score=82.26 Aligned_cols=96 Identities=18% Similarity=0.134 Sum_probs=69.9
Q ss_pred eEEEeccCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHHcCCCcCCCcccee
Q 025906 109 DVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICPEAYFS 188 (246)
Q Consensus 109 dv~V~tyNp~~E~~~vv~~Tl~~~~~ldYP~~kl~vyvlDDG~~d~t~~~~~ea~~~a~~w~~lc~~~gv~~r~p~~Y~~ 188 (246)
+|+||+|| +|.++.+++||.++++.+|| ..+|+|+|||+++.+...+.+ .++++.++. ++.
T Consensus 1 sviip~~n--~~~~~~l~~~l~Sl~~q~~~--~~eiiivdd~ss~d~t~~~~~---------~~~~~~~i~------~i~ 61 (201)
T cd04195 1 SVLMSVYI--KEKPEFLREALESILKQTLP--PDEVVLVKDGPVTQSLNEVLE---------EFKRKLPLK------VVP 61 (201)
T ss_pred CEEEEccc--cchHHHHHHHHHHHHhcCCC--CcEEEEEECCCCchhHHHHHH---------HHHhcCCeE------EEE
Confidence 58999999 44567999999999999999 579999999995433222222 355677777 998
Q ss_pred CCCCCCCCCCchhhHHHH---------HHHHHHHHHHHHHHHHhh
Q 025906 189 DPENGDGDSGNAEFIVER---------EKIKEKYTEFKERVTRAI 224 (246)
Q Consensus 189 r~~~~~aKaGnln~a~~~---------~~~~~~y~~f~~ri~~~~ 224 (246)
.+.|. .++++.|++... ++|-....+++.+..+.+
T Consensus 62 ~~~n~-G~~~a~N~g~~~a~gd~i~~lD~Dd~~~~~~l~~~~~~~ 105 (201)
T cd04195 62 LEKNR-GLGKALNEGLKHCTYDWVARMDTDDISLPDRFEKQLDFI 105 (201)
T ss_pred cCccc-cHHHHHHHHHHhcCCCEEEEeCCccccCcHHHHHHHHHH
Confidence 88774 446778998875 555556667777666554
No 32
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A.
Probab=98.67 E-value=2.2e-09 Score=91.47 Aligned_cols=97 Identities=24% Similarity=0.348 Sum_probs=65.7
Q ss_pred CceeEEEeccCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHHc---CCCcCC
Q 025906 106 PGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRF---GIKTIC 182 (246)
Q Consensus 106 P~Vdv~V~tyNp~~E~~~vv~~Tl~~~~~ldYP~~kl~vyvlDDG~~d~t~~~~~ea~~~a~~w~~lc~~~---gv~~r~ 182 (246)
|.|+|+||+|| |+ +.+.++|.++++.+|| +++|+|+||++++.|.+.+. ++|+++ ++.
T Consensus 1 P~v~Vvip~~~---~~-~~l~~~l~sl~~~~~~--~~~v~vvd~~~~~~~~~~~~----------~~~~~~~~~~v~--- 61 (228)
T PF13641_consen 1 PRVSVVIPAYN---ED-DVLRRCLESLLAQDYP--RLEVVVVDDGSDDETAEILR----------ALAARYPRVRVR--- 61 (228)
T ss_dssp --EEEE--BSS----H-HHHHHHHHHHTTSHHH--TEEEEEEEE-SSS-GCTTHH----------HHHHTTGG-GEE---
T ss_pred CEEEEEEEecC---CH-HHHHHHHHHHHcCCCC--CeEEEEEECCCChHHHHHHH----------HHHHHcCCCceE---
Confidence 78999999999 87 6999999999999997 79999999999997665544 344544 345
Q ss_pred CccceeCCCCCC--CCCCchhhHHHH---------HHHHHHHHHHHHHHHHhh
Q 025906 183 PEAYFSDPENGD--GDSGNAEFIVER---------EKIKEKYTEFKERVTRAI 224 (246)
Q Consensus 183 p~~Y~~r~~~~~--aKaGnln~a~~~---------~~~~~~y~~f~~ri~~~~ 224 (246)
++.++.|.+ .|++++|++++. |+|-..-.+++.+..+.+
T Consensus 62 ---vi~~~~~~g~~~k~~a~n~~~~~~~~d~i~~lD~D~~~~p~~l~~~~~~~ 111 (228)
T PF13641_consen 62 ---VIRRPRNPGPGGKARALNEALAAARGDYILFLDDDTVLDPDWLERLLAAF 111 (228)
T ss_dssp ---EEE----HHHHHHHHHHHHHHHH---SEEEEE-SSEEE-CHHHHHHHHHH
T ss_pred ---EeecCCCCCcchHHHHHHHHHHhcCCCEEEEECCCcEECHHHHHHHHHHH
Confidence 888876655 588899999875 555555667777777665
No 33
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=98.66 E-value=2.9e-08 Score=83.70 Aligned_cols=97 Identities=22% Similarity=0.208 Sum_probs=69.2
Q ss_pred EEEeccCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHHcCCCcCCCccceeC
Q 025906 110 VFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICPEAYFSD 189 (246)
Q Consensus 110 v~V~tyNp~~E~~~vv~~Tl~~~~~ldYP~~kl~vyvlDDG~~d~t~~~~~ea~~~a~~w~~lc~~~gv~~r~p~~Y~~r 189 (246)
|+||+|| |+ +.|++||.+++..+||.++++|+|+|||++|.|.+.++... -....++. ++..
T Consensus 1 viip~~n---~~-~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~--------~~~~~~v~------~~~~ 62 (229)
T cd04192 1 VVIAARN---EA-ENLPRLLQSLSALDYPKEKFEVILVDDHSTDGTVQILEFAA--------AKPNFQLK------ILNN 62 (229)
T ss_pred CEEEecC---cH-HHHHHHHHHHHhCCCCCCceEEEEEcCCCCcChHHHHHHHH--------hCCCcceE------Eeec
Confidence 6899999 77 89999999999999998779999999999998776654111 01122333 5554
Q ss_pred CC-CCCCCCCchhhHHHH---------HHHHHHHHHHHHHHHHhh
Q 025906 190 PE-NGDGDSGNAEFIVER---------EKIKEKYTEFKERVTRAI 224 (246)
Q Consensus 190 ~~-~~~aKaGnln~a~~~---------~~~~~~y~~f~~ri~~~~ 224 (246)
+. ....++.++|.+... |+|-..-.+++.++...+
T Consensus 63 ~~~~~~g~~~a~n~g~~~~~~d~i~~~D~D~~~~~~~l~~l~~~~ 107 (229)
T cd04192 63 SRVSISGKKNALTTAIKAAKGDWIVTTDADCVVPSNWLLTFVAFI 107 (229)
T ss_pred cCcccchhHHHHHHHHHHhcCCEEEEECCCcccCHHHHHHHHHHh
Confidence 42 224455668888765 555566678888888743
No 34
>PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional
Probab=98.64 E-value=2.7e-07 Score=85.84 Aligned_cols=83 Identities=17% Similarity=0.217 Sum_probs=60.2
Q ss_pred CCCCceeEEEeccCCCCCChHHHHHHHHHHhcC------CCCCCCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHHc
Q 025906 103 DQLPGIDVFICTADPTKEPTVEVMNTVLSAMAL------DYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRF 176 (246)
Q Consensus 103 ~~~P~Vdv~V~tyNp~~E~~~vv~~Tl~~~~~l------dYP~~kl~vyvlDDG~~d~t~~~~~ea~~~a~~w~~lc~~~ 176 (246)
...|.|+|+||+|| |+ +.+..++.++.+. ++|....+|+|+||||+|.|.+.+++ ++++.
T Consensus 67 ~~~~~isVVIP~yN---e~-~~i~~~L~~l~~~~~~~~~~~~~~~~EIIVVDDgStD~T~~i~~~----------~~~~~ 132 (333)
T PTZ00260 67 DSDVDLSIVIPAYN---EE-DRLPKMLKETIKYLESRSRKDPKFKYEIIIVNDGSKDKTLKVAKD----------FWRQN 132 (333)
T ss_pred CCCeEEEEEEeeCC---CH-HHHHHHHHHHHHHHHhhhccCCCCCEEEEEEeCCCCCchHHHHHH----------HHHhc
Confidence 34688999999999 87 5788888887653 24545789999999999988877554 44443
Q ss_pred -----CCCcCCCccceeCCCCCCCCCCchhhHHHH
Q 025906 177 -----GIKTICPEAYFSDPENGDGDSGNAEFIVER 206 (246)
Q Consensus 177 -----gv~~r~p~~Y~~r~~~~~aKaGnln~a~~~ 206 (246)
++. .+..+.|.| |++.+|.++..
T Consensus 133 ~~~~~~i~------vi~~~~N~G-~~~A~~~Gi~~ 160 (333)
T PTZ00260 133 INPNIDIR------LLSLLRNKG-KGGAVRIGMLA 160 (333)
T ss_pred CCCCCcEE------EEEcCCCCC-hHHHHHHHHHH
Confidence 355 777776644 55667777653
No 35
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=98.63 E-value=7.7e-08 Score=80.33 Aligned_cols=94 Identities=18% Similarity=0.176 Sum_probs=68.5
Q ss_pred eEEEeccCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHHcCCCcCCCcccee
Q 025906 109 DVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICPEAYFS 188 (246)
Q Consensus 109 dv~V~tyNp~~E~~~vv~~Tl~~~~~ldYP~~kl~vyvlDDG~~d~t~~~~~ea~~~a~~w~~lc~~~gv~~r~p~~Y~~ 188 (246)
+|+||||| |+ +.+.++|.++++.+|| +++|+|+|||++|.|.+.+++ ++++++. ..++.
T Consensus 1 sIvIp~yn---~~-~~l~~~l~sl~~q~~~--~~eiiVvddgS~d~t~~~~~~----------~~~~~~~-----~~~~~ 59 (214)
T cd04196 1 AVLMATYN---GE-KYLREQLDSILAQTYK--NDELIISDDGSTDGTVEIIKE----------YIDKDPF-----IIILI 59 (214)
T ss_pred CEEEEecC---cH-HHHHHHHHHHHhCcCC--CeEEEEEeCCCCCCcHHHHHH----------HHhcCCc-----eEEEE
Confidence 58999999 77 7899999999999999 799999999999988766554 3455431 12344
Q ss_pred CCCCCCCCCCchhhHHHH---------HHHHHHHHHHHHHHHHh
Q 025906 189 DPENGDGDSGNAEFIVER---------EKIKEKYTEFKERVTRA 223 (246)
Q Consensus 189 r~~~~~aKaGnln~a~~~---------~~~~~~y~~f~~ri~~~ 223 (246)
+.+..+.+++|.|.++.. ++|-....+.+..+.+.
T Consensus 60 ~~~~~~G~~~~~n~g~~~~~g~~v~~ld~Dd~~~~~~l~~~~~~ 103 (214)
T cd04196 60 RNGKNLGVARNFESLLQAADGDYVFFCDQDDIWLPDKLERLLKA 103 (214)
T ss_pred eCCCCccHHHHHHHHHHhCCCCEEEEECCCcccChhHHHHHHHH
Confidence 444446677888888754 55555556666666654
No 36
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis. The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=98.61 E-value=1.5e-07 Score=78.36 Aligned_cols=98 Identities=19% Similarity=0.232 Sum_probs=68.7
Q ss_pred CceeEEEeccCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHH-cCCCcCCCc
Q 025906 106 PGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKR-FGIKTICPE 184 (246)
Q Consensus 106 P~Vdv~V~tyNp~~E~~~vv~~Tl~~~~~ldYP~~kl~vyvlDDG~~d~t~~~~~ea~~~a~~w~~lc~~-~gv~~r~p~ 184 (246)
|.|+|+||+|| |+.+.+++||.++++..|| ..+|+|+|||++|.|.+.+.+ .+..+ ..+.
T Consensus 1 p~vsiii~~~n---~~~~~l~~~l~sl~~q~~~--~~eiivvd~gs~d~~~~~~~~---------~~~~~~~~~~----- 61 (202)
T cd04184 1 PLISIVMPVYN---TPEKYLREAIESVRAQTYP--NWELCIADDASTDPEVKRVLK---------KYAAQDPRIK----- 61 (202)
T ss_pred CeEEEEEeccc---CcHHHHHHHHHHHHhCcCC--CeEEEEEeCCCCChHHHHHHH---------HHHhcCCCEE-----
Confidence 67999999999 7667899999999999998 689999999999966554433 22222 2233
Q ss_pred cceeCCCCCCCCCCchhhHHHH---------HHHHHHHHHHHHHHHHhh
Q 025906 185 AYFSDPENGDGDSGNAEFIVER---------EKIKEKYTEFKERVTRAI 224 (246)
Q Consensus 185 ~Y~~r~~~~~aKaGnln~a~~~---------~~~~~~y~~f~~ri~~~~ 224 (246)
++..+.| ..++.++|.+++. +.|-..-.+++.++...+
T Consensus 62 -~~~~~~~-~g~~~a~n~g~~~a~~d~i~~ld~D~~~~~~~l~~~~~~~ 108 (202)
T cd04184 62 -VVFREEN-GGISAATNSALELATGEFVALLDHDDELAPHALYEVVKAL 108 (202)
T ss_pred -EEEcccC-CCHHHHHHHHHHhhcCCEEEEECCCCcCChHHHHHHHHHH
Confidence 5555544 4455668888765 444455566666666543
No 37
>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin. Chitin synthase, also called UDP-N-acetyl-D-glucosamine:chitin 4-beta-N-acetylglucosaminyltransferase, catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of GlcNAc residues formed by covalent beta-1,4 linkages. Chitin is an important component of the cell wall of fungi and bacteria and it is synthesized on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases. Studies with fungi have revealed that most of them contain more than one chitin synthase gene. At least five subclasses of chitin synthases have been identified.
Probab=98.50 E-value=7e-08 Score=84.87 Aligned_cols=41 Identities=29% Similarity=0.338 Sum_probs=39.0
Q ss_pred EEEeccCCCCCChHHHHHHHHHHhcCCCC--------CCCcEEEEEcCCCCc
Q 025906 110 VFICTADPTKEPTVEVMNTVLSAMALDYP--------PEKLHVYLSDDGGAS 153 (246)
Q Consensus 110 v~V~tyNp~~E~~~vv~~Tl~~~~~ldYP--------~~kl~vyvlDDG~~d 153 (246)
|+||+|| |++.+|++||.+++++||| .++++|+|+||||+|
T Consensus 1 v~ip~yN---E~~~~i~~~l~sv~~q~y~~~~~~~~~~~~~evivv~Dgs~d 49 (244)
T cd04190 1 VCVTMYN---EDEEELARTLDSILKNDYPFCARGGDSWKKIVVCVIFDGAIK 49 (244)
T ss_pred CEEeeec---CCHHHHHHHHHHHHHhhHHHHhcCCCCccEEEEEEEeCCccc
Confidence 6899999 9878999999999999999 789999999999998
No 38
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.
Probab=98.48 E-value=3.4e-07 Score=78.20 Aligned_cols=96 Identities=14% Similarity=0.210 Sum_probs=70.0
Q ss_pred ceeEEEeccCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHHc-CCCcCCCcc
Q 025906 107 GIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRF-GIKTICPEA 185 (246)
Q Consensus 107 ~Vdv~V~tyNp~~E~~~vv~~Tl~~~~~ldYP~~kl~vyvlDDG~~d~t~~~~~ea~~~a~~w~~lc~~~-gv~~r~p~~ 185 (246)
.|+|+||+|| |+ +.+.+++.++.+.+||..+.+|+|+|||++|.|.+.+.+ +.++. .+.
T Consensus 1 ~~sIiip~~n---~~-~~l~~~l~sl~~q~~~~~~~evivvd~~s~d~~~~~~~~----------~~~~~~~v~------ 60 (249)
T cd02525 1 FVSIIIPVRN---EE-KYIEELLESLLNQSYPKDLIEIIVVDGGSTDGTREIVQE----------YAAKDPRIR------ 60 (249)
T ss_pred CEEEEEEcCC---ch-hhHHHHHHHHHhccCCCCccEEEEEeCCCCccHHHHHHH----------HHhcCCeEE------
Confidence 3899999999 77 789999999999999977999999999999976555443 22222 244
Q ss_pred ceeCCCCCCCCCCchhhHHHH---------HHHHHHHHHHHHHHHHhh
Q 025906 186 YFSDPENGDGDSGNAEFIVER---------EKIKEKYTEFKERVTRAI 224 (246)
Q Consensus 186 Y~~r~~~~~aKaGnln~a~~~---------~~~~~~y~~f~~ri~~~~ 224 (246)
++..++ ..+++++|.+++. +.|-....+++.++.+..
T Consensus 61 ~i~~~~--~~~~~a~N~g~~~a~~d~v~~lD~D~~~~~~~l~~~~~~~ 106 (249)
T cd02525 61 LIDNPK--RIQSAGLNIGIRNSRGDIIIRVDAHAVYPKDYILELVEAL 106 (249)
T ss_pred EEeCCC--CCchHHHHHHHHHhCCCEEEEECCCccCCHHHHHHHHHHH
Confidence 665443 3366779999876 455556677777777544
No 39
>PRK10063 putative glycosyl transferase; Provisional
Probab=98.47 E-value=2.2e-07 Score=82.72 Aligned_cols=79 Identities=16% Similarity=0.150 Sum_probs=57.1
Q ss_pred CceeEEEeccCCCCCChHHHHHHHHHHhcC-CCCCCCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHHcCCCcCCCc
Q 025906 106 PGIDVFICTADPTKEPTVEVMNTVLSAMAL-DYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICPE 184 (246)
Q Consensus 106 P~Vdv~V~tyNp~~E~~~vv~~Tl~~~~~l-dYP~~kl~vyvlDDG~~d~t~~~~~ea~~~a~~w~~lc~~~gv~~r~p~ 184 (246)
|.|+|+||||| |+ +.+++|+.++.++ ..+...++|+|+||||+|.|.+.+++ ++.+..+.
T Consensus 1 ~~vSVIi~~yN---~~-~~l~~~l~sl~~~~~~~~~~~EiIVvDdgStD~t~~i~~~----------~~~~~~i~----- 61 (248)
T PRK10063 1 MLLSVITVAFR---NL-EGIVKTHASLRHLAQDPGISFEWIVVDGGSNDGTREFLEN----------LNGIFNLR----- 61 (248)
T ss_pred CeEEEEEEeCC---CH-HHHHHHHHHHHHHHhCCCCCEEEEEEECcCcccHHHHHHH----------hcccCCEE-----
Confidence 67999999999 76 7899999999864 22333899999999999988776543 22333455
Q ss_pred cceeCCCCCCCCCCchhhHHHH
Q 025906 185 AYFSDPENGDGDSGNAEFIVER 206 (246)
Q Consensus 185 ~Y~~r~~~~~aKaGnln~a~~~ 206 (246)
+++.+++ ..++.+|.+++.
T Consensus 62 -~i~~~~~--G~~~A~N~Gi~~ 80 (248)
T PRK10063 62 -FVSEPDN--GIYDAMNKGIAM 80 (248)
T ss_pred -EEECCCC--CHHHHHHHHHHH
Confidence 8875533 345668887754
No 40
>PRK10073 putative glycosyl transferase; Provisional
Probab=98.45 E-value=3.8e-07 Score=84.52 Aligned_cols=78 Identities=13% Similarity=0.229 Sum_probs=60.4
Q ss_pred CCceeEEEeccCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHHc-CCCcCCC
Q 025906 105 LPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRF-GIKTICP 183 (246)
Q Consensus 105 ~P~Vdv~V~tyNp~~E~~~vv~~Tl~~~~~ldYP~~kl~vyvlDDG~~d~t~~~~~ea~~~a~~w~~lc~~~-gv~~r~p 183 (246)
.|.|+|+||+|| ++ +.++++|.++++..|+ .++|+|+||||+|.|.+.+.+ ++++. .|.
T Consensus 5 ~p~vSVIIP~yN---~~-~~L~~~l~Sl~~Qt~~--~~EIIiVdDgStD~t~~i~~~----------~~~~~~~i~---- 64 (328)
T PRK10073 5 TPKLSIIIPLYN---AG-KDFRAFMESLIAQTWT--ALEIIIVNDGSTDNSVEIAKH----------YAENYPHVR---- 64 (328)
T ss_pred CCeEEEEEeccC---CH-HHHHHHHHHHHhCCCC--CeEEEEEeCCCCccHHHHHHH----------HHhhCCCEE----
Confidence 488999999999 66 7999999999999998 799999999999988766554 34443 244
Q ss_pred ccceeCCCCCCCCCCchhhHHHH
Q 025906 184 EAYFSDPENGDGDSGNAEFIVER 206 (246)
Q Consensus 184 ~~Y~~r~~~~~aKaGnln~a~~~ 206 (246)
++..+ |. ..++..|.+++.
T Consensus 65 --vi~~~-n~-G~~~arN~gl~~ 83 (328)
T PRK10073 65 --LLHQA-NA-GVSVARNTGLAV 83 (328)
T ss_pred --EEECC-CC-ChHHHHHHHHHh
Confidence 67643 43 345667888765
No 41
>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=98.44 E-value=3.5e-07 Score=70.92 Aligned_cols=52 Identities=23% Similarity=0.241 Sum_probs=46.2
Q ss_pred CCceeEEEeccCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHH
Q 025906 105 LPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREA 162 (246)
Q Consensus 105 ~P~Vdv~V~tyNp~~E~~~vv~~Tl~~~~~ldYP~~kl~vyvlDDG~~d~t~~~~~ea 162 (246)
.|.++|+||||| |+ ..+.++|.++++..|+. .+|+|+||||+|.|.+.+.+.
T Consensus 2 ~~~~siiip~~n---~~-~~l~~~l~s~~~q~~~~--~eiivvddgs~d~t~~~~~~~ 53 (291)
T COG0463 2 MPKVSVVIPTYN---EE-EYLPEALESLLNQTYKD--FEIIVVDDGSTDGTTEIAIEY 53 (291)
T ss_pred CccEEEEEeccc---hh-hhHHHHHHHHHhhhhcc--eEEEEEeCCCCCChHHHHHHH
Confidence 478999999999 77 89999999999999994 789999999999887776654
No 42
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A ....
Probab=98.41 E-value=7.8e-08 Score=75.88 Aligned_cols=76 Identities=25% Similarity=0.244 Sum_probs=57.6
Q ss_pred eEEEeccCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHHcCCCcCCCcccee
Q 025906 109 DVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICPEAYFS 188 (246)
Q Consensus 109 dv~V~tyNp~~E~~~vv~~Tl~~~~~ldYP~~kl~vyvlDDG~~d~t~~~~~ea~~~a~~w~~lc~~~gv~~r~p~~Y~~ 188 (246)
+|+||+|| |+ +.+.+++.++....++ ..+|+|+|||++|.|.+.+.+.. . ...++. |+.
T Consensus 1 Svvip~~n---~~-~~l~~~l~sl~~q~~~--~~eiivvdd~s~d~~~~~~~~~~-------~--~~~~i~------~i~ 59 (169)
T PF00535_consen 1 SVVIPTYN---EA-EYLERTLESLLKQTDP--DFEIIVVDDGSTDETEEILEEYA-------E--SDPNIR------YIR 59 (169)
T ss_dssp EEEEEESS----T-TTHHHHHHHHHHHSGC--EEEEEEEECS-SSSHHHHHHHHH-------C--CSTTEE------EEE
T ss_pred CEEEEeeC---CH-HHHHHHHHHHhhccCC--CEEEEEecccccccccccccccc-------c--cccccc------ccc
Confidence 68999999 75 8999999999999666 88999999999997766555432 1 244555 999
Q ss_pred CCCCCCCCCCchhhHHHH
Q 025906 189 DPENGDGDSGNAEFIVER 206 (246)
Q Consensus 189 r~~~~~aKaGnln~a~~~ 206 (246)
++.|. .++++.|.+.+.
T Consensus 60 ~~~n~-g~~~~~n~~~~~ 76 (169)
T PF00535_consen 60 NPENL-GFSAARNRGIKH 76 (169)
T ss_dssp HCCCS-HHHHHHHHHHHH
T ss_pred ccccc-cccccccccccc
Confidence 99875 566778888765
No 43
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan. Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate.
Probab=98.41 E-value=3.9e-07 Score=77.78 Aligned_cols=94 Identities=16% Similarity=0.127 Sum_probs=68.9
Q ss_pred ceeEEEeccCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHHcCCCcCCCccc
Q 025906 107 GIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICPEAY 186 (246)
Q Consensus 107 ~Vdv~V~tyNp~~E~~~vv~~Tl~~~~~ldYP~~kl~vyvlDDG~~d~t~~~~~ea~~~a~~w~~lc~~~gv~~r~p~~Y 186 (246)
+|+|+||+|| |+++.+.++|.++.+.+ | .+|+|+|||++|.|.+.+.+ .++...+ .
T Consensus 1 ~isVvIp~~n---e~~~~l~~~l~sl~~q~-~---~eiivvdd~s~d~~~~~l~~----------~~~~~~~-------~ 56 (235)
T cd06434 1 DVTVIIPVYD---EDPDVFRECLRSILRQK-P---LEIIVVTDGDDEPYLSILSQ----------TVKYGGI-------F 56 (235)
T ss_pred CeEEEEeecC---CChHHHHHHHHHHHhCC-C---CEEEEEeCCCChHHHHHHHh----------hccCCcE-------E
Confidence 5899999999 88789999999999988 4 58999999999966655522 1122222 3
Q ss_pred eeCCCCCCCCCCchhhHHHH---------HHHHHHHHHHHHHHHHhhc
Q 025906 187 FSDPENGDGDSGNAEFIVER---------EKIKEKYTEFKERVTRAIE 225 (246)
Q Consensus 187 ~~r~~~~~aKaGnln~a~~~---------~~~~~~y~~f~~ri~~~~~ 225 (246)
+....+ ..|++++|.++.. |+|-..-.+++.++...+.
T Consensus 57 v~~~~~-~g~~~a~n~g~~~a~~d~v~~lD~D~~~~~~~l~~l~~~~~ 103 (235)
T cd06434 57 VITVPH-PGKRRALAEGIRHVTTDIVVLLDSDTVWPPNALPEMLKPFE 103 (235)
T ss_pred EEecCC-CChHHHHHHHHHHhCCCEEEEECCCceeChhHHHHHHHhcc
Confidence 333444 4578889988875 6666677788888776663
No 44
>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase
Probab=98.38 E-value=6.1e-07 Score=78.38 Aligned_cols=85 Identities=12% Similarity=0.048 Sum_probs=55.6
Q ss_pred CCCceeEEEeccCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHHcCCCcCCC
Q 025906 104 QLPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICP 183 (246)
Q Consensus 104 ~~P~Vdv~V~tyNp~~E~~~vv~~Tl~~~~~ldYP~~kl~vyvlDDG~~d~t~~~~~ea~~~a~~w~~lc~~~gv~~r~p 183 (246)
..|.|+|+||+|| |. +.+..++..+.....+...++|+|+||||+|.|.+.+++ ++++++.. .
T Consensus 7 ~~~~vsVvIp~yn---e~-~~l~~~l~~l~~~~~~~~~~eiivvDdgS~D~t~~i~~~----------~~~~~~~~---~ 69 (243)
T PLN02726 7 GAMKYSIIVPTYN---ER-LNIALIVYLIFKALQDVKDFEIIVVDDGSPDGTQDVVKQ----------LQKVYGED---R 69 (243)
T ss_pred CCceEEEEEccCC---ch-hhHHHHHHHHHHHhccCCCeEEEEEeCCCCCCHHHHHHH----------HHHhcCCC---c
Confidence 4588999999999 77 567777776654322223789999999999988777654 33444321 1
Q ss_pred ccceeCCCCCCCCCCchhhHHHH
Q 025906 184 EAYFSDPENGDGDSGNAEFIVER 206 (246)
Q Consensus 184 ~~Y~~r~~~~~aKaGnln~a~~~ 206 (246)
..++..+.|.+ +++.+|.+++.
T Consensus 70 v~~~~~~~n~G-~~~a~n~g~~~ 91 (243)
T PLN02726 70 ILLRPRPGKLG-LGTAYIHGLKH 91 (243)
T ss_pred EEEEecCCCCC-HHHHHHHHHHH
Confidence 11444555543 45667777653
No 45
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase. Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm
Probab=98.38 E-value=4.4e-07 Score=74.32 Aligned_cols=95 Identities=15% Similarity=0.092 Sum_probs=68.1
Q ss_pred EEEeccCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHHcCCCcCCCccceeC
Q 025906 110 VFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICPEAYFSD 189 (246)
Q Consensus 110 v~V~tyNp~~E~~~vv~~Tl~~~~~ldYP~~kl~vyvlDDG~~d~t~~~~~ea~~~a~~w~~lc~~~gv~~r~p~~Y~~r 189 (246)
|+||+|| |+ +.+++||.++.+.+|+ ..+|+|+|||++|.|.+.+.+. .++.+.. ..++.+
T Consensus 1 ivip~~n---~~-~~l~~~l~sl~~q~~~--~~eiivvdd~s~d~t~~~~~~~----------~~~~~~~----~~~~~~ 60 (182)
T cd06420 1 LIITTYN---RP-EALELVLKSVLNQSIL--PFEVIIADDGSTEETKELIEEF----------KSQFPIP----IKHVWQ 60 (182)
T ss_pred CEEeecC---Ch-HHHHHHHHHHHhccCC--CCEEEEEeCCCchhHHHHHHHH----------HhhcCCc----eEEEEc
Confidence 5799999 77 7899999999999988 6799999999999765554432 2222211 225655
Q ss_pred CCCCCCCCCchhhHHHH---------HHHHHHHHHHHHHHHHhh
Q 025906 190 PENGDGDSGNAEFIVER---------EKIKEKYTEFKERVTRAI 224 (246)
Q Consensus 190 ~~~~~aKaGnln~a~~~---------~~~~~~y~~f~~ri~~~~ 224 (246)
++....++++.|.+.+. ++|-.+..+++.++....
T Consensus 61 ~~~~~~~~~~~n~g~~~a~g~~i~~lD~D~~~~~~~l~~~~~~~ 104 (182)
T cd06420 61 EDEGFRKAKIRNKAIAAAKGDYLIFIDGDCIPHPDFIADHIELA 104 (182)
T ss_pred CCcchhHHHHHHHHHHHhcCCEEEEEcCCcccCHHHHHHHHHHh
Confidence 55444567788888764 666667778877777655
No 46
>cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine. N-acetyl-glucosamine transferase is responsible for the synthesis of bacteria Poly-beta-1,6-N-acetyl-D-glucosamine (PGA). Poly-beta-1,6-N-acetyl-D-glucosamine is a homopolymer that serves as an adhesion for the maintenance of biofilm structural stability in diverse eubacteria. N-acetyl-glucosamine transferase is the product of gene pgaC. Genetic analysis indicated that all four genes of the pgaABCD locus were required for the PGA production, pgaC being a glycosyltransferase.
Probab=98.36 E-value=4e-07 Score=76.83 Aligned_cols=94 Identities=14% Similarity=0.097 Sum_probs=65.6
Q ss_pred EEEeccCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHHcCCCcCCCccceeC
Q 025906 110 VFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICPEAYFSD 189 (246)
Q Consensus 110 v~V~tyNp~~E~~~vv~~Tl~~~~~ldYP~~kl~vyvlDDG~~d~t~~~~~ea~~~a~~w~~lc~~~gv~~r~p~~Y~~r 189 (246)
|+||+|| |+ +.|.++|.++.+.+ | +++|+|+||||+|.|.+.++ .. +..-++. ++.+
T Consensus 1 ViIp~~N---e~-~~l~~~l~sl~~~~-~--~~eIivvdd~S~D~t~~~~~-~~---------~~~~~v~------~i~~ 57 (191)
T cd06436 1 VLVPCLN---EE-AVIQRTLASLLRNK-P--NFLVLVIDDASDDDTAGIVR-LA---------ITDSRVH------LLRR 57 (191)
T ss_pred CEEeccc---cH-HHHHHHHHHHHhCC-C--CeEEEEEECCCCcCHHHHHh-he---------ecCCcEE------EEec
Confidence 6899999 88 89999999999998 6 78999999999997766543 10 0112444 7765
Q ss_pred C--CCCCCCCCchhhHHHH--------------------HHHHHHHHHHHHHHHHhhcc
Q 025906 190 P--ENGDGDSGNAEFIVER--------------------EKIKEKYTEFKERVTRAIEK 226 (246)
Q Consensus 190 ~--~~~~aKaGnln~a~~~--------------------~~~~~~y~~f~~ri~~~~~~ 226 (246)
. .....|++.+|.+++. ++|-..-.+++.++..++++
T Consensus 58 ~~~~~~~Gk~~aln~g~~~~~~~~~~~g~~~~~d~v~~~DaD~~~~~~~l~~~~~~~~~ 116 (191)
T cd06436 58 HLPNARTGKGDALNAAYDQIRQILIEEGADPERVIIAVIDADGRLDPNALEAVAPYFSD 116 (191)
T ss_pred cCCcCCCCHHHHHHHHHHHHhhhccccccCCCccEEEEECCCCCcCHhHHHHHHHhhcC
Confidence 3 2234678889888764 23334456666666666543
No 47
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis. Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=98.33 E-value=1.1e-06 Score=71.87 Aligned_cols=73 Identities=15% Similarity=0.214 Sum_probs=55.5
Q ss_pred eEEEeccCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHHcCCCcCCCcccee
Q 025906 109 DVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICPEAYFS 188 (246)
Q Consensus 109 dv~V~tyNp~~E~~~vv~~Tl~~~~~ldYP~~kl~vyvlDDG~~d~t~~~~~ea~~~a~~w~~lc~~~gv~~r~p~~Y~~ 188 (246)
+|+||+|| ++ +.+++++.++.+..|| .++|+|+|||++|.|.+.+.+. ..+ +. |+.
T Consensus 1 sivi~~~n---~~-~~l~~~l~sl~~q~~~--~~evivvDd~s~d~~~~~~~~~----------~~~--~~------~~~ 56 (202)
T cd06433 1 SIITPTYN---QA-ETLEETIDSVLSQTYP--NIEYIVIDGGSTDGTVDIIKKY----------EDK--IT------YWI 56 (202)
T ss_pred CEEEeccc---hH-HHHHHHHHHHHhCCCC--CceEEEEeCCCCccHHHHHHHh----------Hhh--cE------EEE
Confidence 48999999 76 8999999999999998 5899999999999776655432 222 33 554
Q ss_pred CCCCCCCCCCchhhHHHH
Q 025906 189 DPENGDGDSGNAEFIVER 206 (246)
Q Consensus 189 r~~~~~aKaGnln~a~~~ 206 (246)
...| ..++++.|.|++.
T Consensus 57 ~~~~-~g~~~a~n~~~~~ 73 (202)
T cd06433 57 SEPD-KGIYDAMNKGIAL 73 (202)
T ss_pred ecCC-cCHHHHHHHHHHH
Confidence 4444 4467788888875
No 48
>PRK10018 putative glycosyl transferase; Provisional
Probab=98.30 E-value=1.4e-06 Score=79.40 Aligned_cols=80 Identities=14% Similarity=0.205 Sum_probs=57.2
Q ss_pred CCCceeEEEeccCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHHcCCCcCCC
Q 025906 104 QLPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICP 183 (246)
Q Consensus 104 ~~P~Vdv~V~tyNp~~E~~~vv~~Tl~~~~~ldYP~~kl~vyvlDDG~~d~t~~~~~ea~~~a~~w~~lc~~~gv~~r~p 183 (246)
..|.|+|+||||| ++ +.+.++|.++++.+|| ..+|+|+||||++ .+.+. .++++++- .+
T Consensus 3 ~~p~VSVIip~yN---~~-~~l~~~l~Svl~Qt~~--~~EiIVVDDgS~~--~~~~~----------~~~~~~~~---~r 61 (279)
T PRK10018 3 DNPLISIYMPTWN---RQ-QLAIRAIKSVLRQDYS--NWEMIIVDDCSTS--WEQLQ----------QYVTALND---PR 61 (279)
T ss_pred CCCEEEEEEEeCC---CH-HHHHHHHHHHHhCCCC--CeEEEEEECCCCC--HHHHH----------HHHHHcCC---CC
Confidence 3588999999999 77 5788999999999999 7999999999984 22222 34444431 12
Q ss_pred ccceeCCCCCCCCCCchhhHHH
Q 025906 184 EAYFSDPENGDGDSGNAEFIVE 205 (246)
Q Consensus 184 ~~Y~~r~~~~~aKaGnln~a~~ 205 (246)
..|+..+.|.| .+++.|.+++
T Consensus 62 i~~i~~~~n~G-~~~a~N~gi~ 82 (279)
T PRK10018 62 ITYIHNDINSG-ACAVRNQAIM 82 (279)
T ss_pred EEEEECCCCCC-HHHHHHHHHH
Confidence 34887776644 3455677764
No 49
>PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional
Probab=98.25 E-value=1.9e-06 Score=79.44 Aligned_cols=54 Identities=19% Similarity=0.077 Sum_probs=43.1
Q ss_pred CCCCceeEEEeccCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHH
Q 025906 103 DQLPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMR 160 (246)
Q Consensus 103 ~~~P~Vdv~V~tyNp~~E~~~vv~~Tl~~~~~ldYP~~kl~vyvlDDG~~d~t~~~~~ 160 (246)
..-|.|+|+||+|| |+ +.|.++|.++.+..++....+|+|+||||+|.|.+.++
T Consensus 28 ~~~~~vSVVIPayN---ee-~~I~~~l~sl~~~~~~~~~~EIIVVDDgStD~T~~ia~ 81 (306)
T PRK13915 28 KAGRTVSVVLPALN---EE-ETVGKVVDSIRPLLMEPLVDELIVIDSGSTDATAERAA 81 (306)
T ss_pred cCCCCEEEEEecCC---cH-HHHHHHHHHHHHHhccCCCcEEEEEeCCCccHHHHHHH
Confidence 34689999999999 88 78999999998865522256999999999997655443
No 50
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=98.24 E-value=1.8e-06 Score=72.31 Aligned_cols=93 Identities=16% Similarity=0.091 Sum_probs=63.1
Q ss_pred EEEeccCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHHcCCCcCCCccceeC
Q 025906 110 VFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICPEAYFSD 189 (246)
Q Consensus 110 v~V~tyNp~~E~~~vv~~Tl~~~~~ldYP~~kl~vyvlDDG~~d~t~~~~~ea~~~a~~w~~lc~~~gv~~r~p~~Y~~r 189 (246)
|+||||| |+ +.++++|.++++..|| ..+|+|+|||++|.|.+.+.+ ++.+.++. |+..
T Consensus 1 viI~~~n---~~-~~l~~~l~sl~~q~~~--~~eiiivD~~s~d~t~~~~~~----------~~~~~~i~------~~~~ 58 (202)
T cd04185 1 AVVVTYN---RL-DLLKECLDALLAQTRP--PDHIIVIDNASTDGTAEWLTS----------LGDLDNIV------YLRL 58 (202)
T ss_pred CEEEeeC---CH-HHHHHHHHHHHhccCC--CceEEEEECCCCcchHHHHHH----------hcCCCceE------EEEC
Confidence 5899999 77 8999999999999999 568999999999976655443 23334445 8887
Q ss_pred CCCCCCCCCchhhHHHH------------HHHHHHHHHHHHHHHHhhc
Q 025906 190 PENGDGDSGNAEFIVER------------EKIKEKYTEFKERVTRAIE 225 (246)
Q Consensus 190 ~~~~~aKaGnln~a~~~------------~~~~~~y~~f~~ri~~~~~ 225 (246)
+.|.+ .+.++|.+... ++|-..-.+++.+..+..+
T Consensus 59 ~~n~g-~~~~~n~~~~~a~~~~~d~v~~ld~D~~~~~~~l~~l~~~~~ 105 (202)
T cd04185 59 PENLG-GAGGFYEGVRRAYELGYDWIWLMDDDAIPDPDALEKLLAYAD 105 (202)
T ss_pred ccccc-hhhHHHHHHHHHhccCCCEEEEeCCCCCcChHHHHHHHHHHh
Confidence 77754 33444444432 3333444566666665543
No 51
>PRK15489 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=98.24 E-value=8.1e-06 Score=83.18 Aligned_cols=80 Identities=10% Similarity=0.269 Sum_probs=57.2
Q ss_pred CCCCCceeEEEeccCCCCCChHHHHHHHHHHh-cCCCCCCCcEEEE---EcCCCCcccHHHHHHHHHHhhchHHHHHHcC
Q 025906 102 ADQLPGIDVFICTADPTKEPTVEVMNTVLSAM-ALDYPPEKLHVYL---SDDGGASITLLGMREAWKFARSWLPFCKRFG 177 (246)
Q Consensus 102 ~~~~P~Vdv~V~tyNp~~E~~~vv~~Tl~~~~-~ldYP~~kl~vyv---lDDG~~d~t~~~~~ea~~~a~~w~~lc~~~g 177 (246)
..+.|.|+|+||+|| |+ +++.++|.+++ ++||| +++|+| .|||.+ .+++. .++.++.
T Consensus 67 ~~~~~~vsIlVPa~n---E~-~VI~~~v~~ll~~ldYp--~~~I~v~~~~nD~~T---~~~~~----------~~~~~~p 127 (703)
T PRK15489 67 ERDEQPLAIMVPAWK---EY-DVIAKMIENMLATLDYR--RYVIFVGTYPNDAET---ITEVE----------RMRRRYK 127 (703)
T ss_pred ccCCCceEEEEeCCC---cH-HHHHHHHHHHHhcCCCC--CeEEEEEecCCCccH---HHHHH----------HHhccCC
Confidence 345699999999999 98 89999999975 89999 789999 577744 34333 3444442
Q ss_pred -CCcCCCccceeCCCC-CCCCCCchhhHHHH
Q 025906 178 -IKTICPEAYFSDPEN-GDGDSGNAEFIVER 206 (246)
Q Consensus 178 -v~~r~p~~Y~~r~~~-~~aKaGnln~a~~~ 206 (246)
++ -+..+++ +..|+..+|+++..
T Consensus 128 ~~~------~v~~~~~gp~gKa~ALN~~l~~ 152 (703)
T PRK15489 128 RLV------RVEVPHDGPTCKADCLNWIIQA 152 (703)
T ss_pred cEE------EEEcCCCCCCCHHHHHHHHHHH
Confidence 22 3333544 35688899998753
No 52
>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation. UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate.
Probab=98.21 E-value=1.7e-06 Score=73.31 Aligned_cols=78 Identities=18% Similarity=0.133 Sum_probs=56.7
Q ss_pred EEEeccCCCCCChHHHHHHHHHHhcCCC--CCCCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHHcCCCcCCCccce
Q 025906 110 VFICTADPTKEPTVEVMNTVLSAMALDY--PPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICPEAYF 187 (246)
Q Consensus 110 v~V~tyNp~~E~~~vv~~Tl~~~~~ldY--P~~kl~vyvlDDG~~d~t~~~~~ea~~~a~~w~~lc~~~gv~~r~p~~Y~ 187 (246)
|+||+|| |+ +.+.++|.++....+ +....+|+|+||||+|.|.+.+.+ ++++++.. ..++
T Consensus 1 iiip~yN---~~-~~l~~~l~~l~~~~~~~~~~~~eiivvdd~S~D~t~~~~~~----------~~~~~~~~----i~~i 62 (211)
T cd04188 1 VVIPAYN---EE-KRLPPTLEEAVEYLEERPSFSYEIIVVDDGSKDGTAEVARK----------LARKNPAL----IRVL 62 (211)
T ss_pred CEEcccC---hH-HHHHHHHHHHHHHHhccCCCCEEEEEEeCCCCCchHHHHHH----------HHHhCCCc----EEEE
Confidence 6899999 77 789999999988755 334789999999999977666543 44555421 1277
Q ss_pred eCCCCCCCCCCchhhHHHH
Q 025906 188 SDPENGDGDSGNAEFIVER 206 (246)
Q Consensus 188 ~r~~~~~aKaGnln~a~~~ 206 (246)
..+.|.| +++.+|.++..
T Consensus 63 ~~~~n~G-~~~a~~~g~~~ 80 (211)
T cd04188 63 TLPKNRG-KGGAVRAGMLA 80 (211)
T ss_pred EcccCCC-cHHHHHHHHHH
Confidence 7676655 67788888753
No 53
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the ex
Probab=98.16 E-value=3.7e-06 Score=68.85 Aligned_cols=77 Identities=17% Similarity=0.022 Sum_probs=58.0
Q ss_pred EEEeccCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHHcCCCcCCCccceeC
Q 025906 110 VFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICPEAYFSD 189 (246)
Q Consensus 110 v~V~tyNp~~E~~~vv~~Tl~~~~~ldYP~~kl~vyvlDDG~~d~t~~~~~ea~~~a~~w~~lc~~~gv~~r~p~~Y~~r 189 (246)
|+||+|| |+ +.+.+++.++.+..|+....+|+|+|||++|.|.+.+.+.. .+..- ..++..
T Consensus 1 iii~~~n---~~-~~l~~~l~sl~~~~~~~~~~eiivvd~~s~d~~~~~~~~~~----------~~~~~-----~~~~~~ 61 (185)
T cd04179 1 VVIPAYN---EE-ENIPELVERLLAVLEEGYDYEIIVVDDGSTDGTAEIARELA----------ARVPR-----VRVIRL 61 (185)
T ss_pred CeecccC---hH-hhHHHHHHHHHHHhccCCCEEEEEEcCCCCCChHHHHHHHH----------HhCCC-----eEEEEc
Confidence 5799999 76 78999999999999865588999999999997766655422 22211 136767
Q ss_pred CCCCCCCCCchhhHHHH
Q 025906 190 PENGDGDSGNAEFIVER 206 (246)
Q Consensus 190 ~~~~~aKaGnln~a~~~ 206 (246)
+.|.+ +++++|.+.+.
T Consensus 62 ~~n~G-~~~a~n~g~~~ 77 (185)
T cd04179 62 SRNFG-KGAAVRAGFKA 77 (185)
T ss_pred cCCCC-ccHHHHHHHHH
Confidence 76654 77888888865
No 54
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the
Probab=98.14 E-value=4.5e-06 Score=65.48 Aligned_cols=88 Identities=26% Similarity=0.314 Sum_probs=63.0
Q ss_pred EEEeccCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHH--cCCCcCCCccce
Q 025906 110 VFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKR--FGIKTICPEAYF 187 (246)
Q Consensus 110 v~V~tyNp~~E~~~vv~~Tl~~~~~ldYP~~kl~vyvlDDG~~d~t~~~~~ea~~~a~~w~~lc~~--~gv~~r~p~~Y~ 187 (246)
|+||+|| |+ +.+.+||.++++..|+ ..+|+|+|||++|.|.+.+.+. +.+ ..+. ++
T Consensus 1 Viip~~n---~~-~~l~~~l~sl~~q~~~--~~~iivvdd~s~d~t~~~~~~~----------~~~~~~~~~------~~ 58 (180)
T cd06423 1 IIVPAYN---EE-AVIERTIESLLALDYP--KLEVIVVDDGSTDDTLEILEEL----------AALYIRRVL------VV 58 (180)
T ss_pred CeecccC---hH-HHHHHHHHHHHhCCCC--ceEEEEEeCCCccchHHHHHHH----------hccccceEE------EE
Confidence 5799999 77 8999999999999996 7899999999999776654432 222 1223 55
Q ss_pred eCCCCCCCCCCchhhHHHH---------HHHHHHHHHHHHHH
Q 025906 188 SDPENGDGDSGNAEFIVER---------EKIKEKYTEFKERV 220 (246)
Q Consensus 188 ~r~~~~~aKaGnln~a~~~---------~~~~~~y~~f~~ri 220 (246)
..+.+ ..++.+.|.+++. +.|-....+++..+
T Consensus 59 ~~~~~-~g~~~~~n~~~~~~~~~~i~~~D~D~~~~~~~l~~~ 99 (180)
T cd06423 59 RDKEN-GGKAGALNAGLRHAKGDIVVVLDADTILEPDALKRL 99 (180)
T ss_pred Eeccc-CCchHHHHHHHHhcCCCEEEEECCCCCcChHHHHHH
Confidence 55555 5567888888765 44444456666666
No 55
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine . This family includes human Beta3GnTL1 and related eukaryotic proteins. Human Beta3GnTL1 is a putative beta-1,3-N-acetylglucosaminyltransferase. Beta3GnTL1 is expressed at various levels in most of tissues examined. Beta 1, 3-N-acetylglucosaminyltransferase has been found to be essential for the formation of poly-N-acetyllactosamine. Poly-N-acetyllactosamine is a unique carbohydrate composed of N-acetyllactosamine repeats. It is often an important part of cell-type-specific oligosaccharide structures and some functional oligosaccharides. It has been shown that the structure and biosynthesis of poly-N-acetyllactosamine display a dramatic change during development and oncogenesis. Several members of beta-1, 3-N-acetylglucosaminyltransferase have been identified.
Probab=98.13 E-value=5.3e-06 Score=70.71 Aligned_cols=47 Identities=9% Similarity=0.106 Sum_probs=41.3
Q ss_pred EEEeccCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHH
Q 025906 110 VFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMRE 161 (246)
Q Consensus 110 v~V~tyNp~~E~~~vv~~Tl~~~~~ldYP~~kl~vyvlDDG~~d~t~~~~~e 161 (246)
|+||+|| ++ +.++++|.++++.+||. ..+|+|+||||+|.|.+.+.+
T Consensus 1 ViIp~yn---~~-~~l~~~l~sl~~q~~~~-~~eiiVvDd~S~d~t~~i~~~ 47 (219)
T cd06913 1 IILPVHN---GE-QWLDECLESVLQQDFEG-TLELSVFNDASTDKSAEIIEK 47 (219)
T ss_pred CEEeecC---cH-HHHHHHHHHHHhCCCCC-CEEEEEEeCCCCccHHHHHHH
Confidence 6899999 66 79999999999999983 699999999999988766554
No 56
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1. Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi,
Probab=98.10 E-value=5.6e-06 Score=69.98 Aligned_cols=75 Identities=16% Similarity=0.107 Sum_probs=55.3
Q ss_pred EEEeccCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHHcC-CCcCCCcccee
Q 025906 110 VFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFG-IKTICPEAYFS 188 (246)
Q Consensus 110 v~V~tyNp~~E~~~vv~~Tl~~~~~ldYP~~kl~vyvlDDG~~d~t~~~~~ea~~~a~~w~~lc~~~g-v~~r~p~~Y~~ 188 (246)
|+||+|| |+ +.+.+++.++.+..|+ ...+|+|+||||+|.|.+.+.+ +.++.+ +. ++.
T Consensus 1 ViIp~yn---~~-~~l~~~l~sl~~q~~~-~~~eiiiVDd~S~d~t~~~~~~----------~~~~~~~i~------~~~ 59 (224)
T cd06442 1 IIIPTYN---ER-ENIPELIERLDAALKG-IDYEIIVVDDNSPDGTAEIVRE----------LAKEYPRVR------LIV 59 (224)
T ss_pred CeEeccc---hh-hhHHHHHHHHHHhhcC-CCeEEEEEeCCCCCChHHHHHH----------HHHhCCceE------EEe
Confidence 6899999 77 7899999999999882 2799999999999987665443 333433 33 666
Q ss_pred CCCCCCCCCCchhhHHHH
Q 025906 189 DPENGDGDSGNAEFIVER 206 (246)
Q Consensus 189 r~~~~~aKaGnln~a~~~ 206 (246)
.+.| ..+++++|.+.+.
T Consensus 60 ~~~n-~G~~~a~n~g~~~ 76 (224)
T cd06442 60 RPGK-RGLGSAYIEGFKA 76 (224)
T ss_pred cCCC-CChHHHHHHHHHH
Confidence 6655 4456778888764
No 57
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans. UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.
Probab=98.09 E-value=6.3e-06 Score=74.26 Aligned_cols=79 Identities=18% Similarity=0.076 Sum_probs=58.6
Q ss_pred eEEEeccCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHH--cCCCcCCCccc
Q 025906 109 DVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKR--FGIKTICPEAY 186 (246)
Q Consensus 109 dv~V~tyNp~~E~~~vv~~Tl~~~~~ldYP~~kl~vyvlDDG~~d~t~~~~~ea~~~a~~w~~lc~~--~gv~~r~p~~Y 186 (246)
+|+||+|| |+++.+.++|.++.+..+|....+|+|+||||+|.|.+.+.+. .+.+ -+|. +
T Consensus 1 SIIIp~~N---~~~~~l~~~l~Sl~~~~~~~~~~EIIvVDd~S~d~t~~~~~~~---------~~~~~~~~v~------v 62 (299)
T cd02510 1 SVIIIFHN---EALSTLLRTVHSVINRTPPELLKEIILVDDFSDKPELKLLLEE---------YYKKYLPKVK------V 62 (299)
T ss_pred CEEEEEec---CcHHHHHHHHHHHHhcCchhcCCEEEEEECCCCchHHHHHHHH---------HHhhcCCcEE------E
Confidence 58999999 8778999999999999988656799999999999887776541 1122 2455 8
Q ss_pred eeCCCCCCCCCCchhhHHHH
Q 025906 187 FSDPENGDGDSGNAEFIVER 206 (246)
Q Consensus 187 ~~r~~~~~aKaGnln~a~~~ 206 (246)
+..+.|.+ .+...|.+...
T Consensus 63 i~~~~n~G-~~~a~N~g~~~ 81 (299)
T cd02510 63 LRLKKREG-LIRARIAGARA 81 (299)
T ss_pred EEcCCCCC-HHHHHHHHHHH
Confidence 87776644 34456766654
No 58
>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide. UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.
Probab=98.08 E-value=6.3e-06 Score=71.57 Aligned_cols=87 Identities=18% Similarity=0.243 Sum_probs=62.5
Q ss_pred ceeEEEeccCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHHcCCCcCCCccc
Q 025906 107 GIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICPEAY 186 (246)
Q Consensus 107 ~Vdv~V~tyNp~~E~~~vv~~Tl~~~~~ldYP~~kl~vyvlDDG~~d~t~~~~~ea~~~a~~w~~lc~~~gv~~r~p~~Y 186 (246)
+|+|+||||| |+ +.++++|.++.... -+|+|+||||+|.|. ++|+++|+. .
T Consensus 1 ~isvii~~~N---e~-~~l~~~l~sl~~~~-----~eiivvD~gStD~t~--------------~i~~~~~~~------v 51 (229)
T cd02511 1 TLSVVIITKN---EE-RNIERCLESVKWAV-----DEIIVVDSGSTDRTV--------------EIAKEYGAK------V 51 (229)
T ss_pred CEEEEEEeCC---cH-HHHHHHHHHHhccc-----CEEEEEeCCCCccHH--------------HHHHHcCCE------E
Confidence 3899999999 77 68999999997541 289999999999553 345567877 6
Q ss_pred eeCCCCCCCCCCchhhHHHH---------HHHHHHHHHHHHHHHHhh
Q 025906 187 FSDPENGDGDSGNAEFIVER---------EKIKEKYTEFKERVTRAI 224 (246)
Q Consensus 187 ~~r~~~~~aKaGnln~a~~~---------~~~~~~y~~f~~ri~~~~ 224 (246)
+.. .+ ...+...|.|++. |+|...-.+++.++.+..
T Consensus 52 ~~~-~~-~g~~~~~n~~~~~a~~d~vl~lDaD~~~~~~~~~~l~~~~ 96 (229)
T cd02511 52 YQR-WW-DGFGAQRNFALELATNDWVLSLDADERLTPELADEILALL 96 (229)
T ss_pred EEC-CC-CChHHHHHHHHHhCCCCEEEEEeCCcCcCHHHHHHHHHHH
Confidence 666 33 3344557878764 666666667776666553
No 59
>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function. Glycosyltransferase family 2 (GT-2) subfamily of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=97.97 E-value=1.2e-05 Score=67.74 Aligned_cols=85 Identities=15% Similarity=0.181 Sum_probs=59.2
Q ss_pred eeEEEeccCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHHcCCCcCCCccce
Q 025906 108 IDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICPEAYF 187 (246)
Q Consensus 108 Vdv~V~tyNp~~E~~~vv~~Tl~~~~~ldYP~~kl~vyvlDDG~~d~t~~~~~ea~~~a~~w~~lc~~~gv~~r~p~~Y~ 187 (246)
|+|+||+|| |+ +.+.++|.++++..|+ ..+|+|+|||++|.|.+.+ ++.++. |+
T Consensus 1 vsvii~~~n---~~-~~l~~~l~sl~~q~~~--~~evivvdd~s~d~~~~~~--------------~~~~~~------~~ 54 (221)
T cd02522 1 LSIIIPTLN---EA-ENLPRLLASLRRLNPL--PLEIIVVDGGSTDGTVAIA--------------RSAGVV------VI 54 (221)
T ss_pred CEEEEEccC---cH-HHHHHHHHHHHhccCC--CcEEEEEeCCCCccHHHHH--------------hcCCeE------EE
Confidence 689999999 77 5899999999999985 7899999999999654433 224444 65
Q ss_pred eCCCCCCCCCCchhhHHHH---------HHHHHHHHHHHHHHH
Q 025906 188 SDPENGDGDSGNAEFIVER---------EKIKEKYTEFKERVT 221 (246)
Q Consensus 188 ~r~~~~~aKaGnln~a~~~---------~~~~~~y~~f~~ri~ 221 (246)
..+ ..++++.|.+.+. +.|-....+++.++.
T Consensus 55 ~~~---~g~~~a~n~g~~~a~~~~i~~~D~D~~~~~~~l~~l~ 94 (221)
T cd02522 55 SSP---KGRARQMNAGAAAARGDWLLFLHADTRLPPDWDAAII 94 (221)
T ss_pred eCC---cCHHHHHHHHHHhccCCEEEEEcCCCCCChhHHHHHH
Confidence 433 2355667766654 444444455555543
No 60
>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional
Probab=97.97 E-value=1.6e-05 Score=73.65 Aligned_cols=54 Identities=19% Similarity=0.202 Sum_probs=40.0
Q ss_pred CCceeEEEeccCCCCCChHHHHHHHHHHhc-CCCCCCCcEEEEEcCCCCcccHHHHHHH
Q 025906 105 LPGIDVFICTADPTKEPTVEVMNTVLSAMA-LDYPPEKLHVYLSDDGGASITLLGMREA 162 (246)
Q Consensus 105 ~P~Vdv~V~tyNp~~E~~~vv~~Tl~~~~~-ldYP~~kl~vyvlDDG~~d~t~~~~~ea 162 (246)
.+.++|+||+|| |+ +.+..++.++.. ++-.....+|+|+||||+|.|.+.+++.
T Consensus 5 ~~~vSVVIP~yN---E~-~~i~~~l~~l~~~~~~~~~~~EIIvVDDgS~D~T~~il~~~ 59 (325)
T PRK10714 5 IKKVSVVIPVYN---EQ-ESLPELIRRTTAACESLGKEYEILLIDDGSSDNSAEMLVEA 59 (325)
T ss_pred CCeEEEEEcccC---ch-hhHHHHHHHHHHHHHhCCCCEEEEEEeCCCCCcHHHHHHHH
Confidence 467999999999 87 677777766542 1111126899999999999998887653
No 61
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=97.93 E-value=1.5e-05 Score=63.40 Aligned_cols=72 Identities=17% Similarity=0.230 Sum_probs=52.7
Q ss_pred EEEeccCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHHcCCCcCCCccceeC
Q 025906 110 VFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICPEAYFSD 189 (246)
Q Consensus 110 v~V~tyNp~~E~~~vv~~Tl~~~~~ldYP~~kl~vyvlDDG~~d~t~~~~~ea~~~a~~w~~lc~~~gv~~r~p~~Y~~r 189 (246)
|+||+|| |+ +.+.+|+.++.+.+|| ..+|+|+|||+++.|.+.+.+.. . .+. ++..
T Consensus 1 vii~~~~---~~-~~l~~~l~sl~~~~~~--~~~iiivdd~s~~~~~~~~~~~~----------~--~~~------~~~~ 56 (166)
T cd04186 1 IIIVNYN---SL-EYLKACLDSLLAQTYP--DFEVIVVDNASTDGSVELLRELF----------P--EVR------LIRN 56 (166)
T ss_pred CEEEecC---CH-HHHHHHHHHHHhccCC--CeEEEEEECCCCchHHHHHHHhC----------C--CeE------EEec
Confidence 5899998 75 8999999999999986 78999999999996655544321 1 344 6655
Q ss_pred CCCCCCCCCchhhHHHH
Q 025906 190 PENGDGDSGNAEFIVER 206 (246)
Q Consensus 190 ~~~~~aKaGnln~a~~~ 206 (246)
+.|. .+++++|.+++.
T Consensus 57 ~~~~-g~~~a~n~~~~~ 72 (166)
T cd04186 57 GENL-GFGAGNNQGIRE 72 (166)
T ss_pred CCCc-ChHHHhhHHHhh
Confidence 5553 345677777654
No 62
>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1. A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.
Probab=97.86 E-value=2.1e-05 Score=64.79 Aligned_cols=76 Identities=17% Similarity=0.115 Sum_probs=51.7
Q ss_pred EEEeccCCCCCChHHHHHHHHHHhcCCCC-CCCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHHc-CCCcCCCccce
Q 025906 110 VFICTADPTKEPTVEVMNTVLSAMALDYP-PEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRF-GIKTICPEAYF 187 (246)
Q Consensus 110 v~V~tyNp~~E~~~vv~~Tl~~~~~ldYP-~~kl~vyvlDDG~~d~t~~~~~ea~~~a~~w~~lc~~~-gv~~r~p~~Y~ 187 (246)
|+||+|| |+ +.+.+++.++..+.+. ....+|+|+||||+|.|.+.+.+ ++.+. ++. ++
T Consensus 1 viIp~~n---~~-~~l~~~l~sl~~~~~~~~~~~eiivvdd~s~d~t~~~~~~----------~~~~~~~i~------~i 60 (181)
T cd04187 1 IVVPVYN---EE-ENLPELYERLKAVLESLGYDYEIIFVDDGSTDRTLEILRE----------LAARDPRVK------VI 60 (181)
T ss_pred CEEeecC---ch-hhHHHHHHHHHHHHHhcCCCeEEEEEeCCCCccHHHHHHH----------HHhhCCCEE------EE
Confidence 5899999 77 6777777776554321 12789999999999987666443 33333 355 77
Q ss_pred eCCCCCCCCCCchhhHHHH
Q 025906 188 SDPENGDGDSGNAEFIVER 206 (246)
Q Consensus 188 ~r~~~~~aKaGnln~a~~~ 206 (246)
....|. .+++++|.++..
T Consensus 61 ~~~~n~-G~~~a~n~g~~~ 78 (181)
T cd04187 61 RLSRNF-GQQAALLAGLDH 78 (181)
T ss_pred EecCCC-CcHHHHHHHHHh
Confidence 666554 467778888754
No 63
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it als
Probab=97.52 E-value=0.00026 Score=54.07 Aligned_cols=74 Identities=24% Similarity=0.233 Sum_probs=54.2
Q ss_pred EEEeccCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHH-cCCCcCCCcccee
Q 025906 110 VFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKR-FGIKTICPEAYFS 188 (246)
Q Consensus 110 v~V~tyNp~~E~~~vv~~Tl~~~~~ldYP~~kl~vyvlDDG~~d~t~~~~~ea~~~a~~w~~lc~~-~gv~~r~p~~Y~~ 188 (246)
|+||+|| |+ ..+..|+.++....|+ ..+++|+|||+++.+.+.+.+.. +. ..+. ++.
T Consensus 1 iii~~~~---~~-~~l~~~l~s~~~~~~~--~~~i~i~~~~~~~~~~~~~~~~~----------~~~~~~~------~~~ 58 (156)
T cd00761 1 VIIPAYN---EE-PYLERCLESLLAQTYP--NFEVIVVDDGSTDGTLEILEEYA----------KKDPRVI------RVI 58 (156)
T ss_pred CEEeecC---cH-HHHHHHHHHHHhCCcc--ceEEEEEeCCCCccHHHHHHHHH----------hcCCCeE------EEE
Confidence 5799998 65 8999999999999996 78999999999996666555432 22 2333 555
Q ss_pred CCCCCCCCCCchhhHHHH
Q 025906 189 DPENGDGDSGNAEFIVER 206 (246)
Q Consensus 189 r~~~~~aKaGnln~a~~~ 206 (246)
.+.+ ..+++++|.+...
T Consensus 59 ~~~~-~g~~~~~~~~~~~ 75 (156)
T cd00761 59 NEEN-QGLAAARNAGLKA 75 (156)
T ss_pred ecCC-CChHHHHHHHHHH
Confidence 5544 4566778888755
No 64
>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase. Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen.
Probab=97.37 E-value=0.00031 Score=59.95 Aligned_cols=84 Identities=10% Similarity=0.019 Sum_probs=59.2
Q ss_pred EEEeccCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHHcCCCcCCCccceeC
Q 025906 110 VFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICPEAYFSD 189 (246)
Q Consensus 110 v~V~tyNp~~E~~~vv~~Tl~~~~~ldYP~~kl~vyvlDDG~~d~t~~~~~ea~~~a~~w~~lc~~~gv~~r~p~~Y~~r 189 (246)
++||+|| |+.+.+.+||.++.+. ..+|+|+|||+++.+... . .+ .+.++. ++..
T Consensus 1 ~vI~~yn---~~~~~l~~~l~sl~~q-----~~~iivvDn~s~~~~~~~-~----------~~-~~~~i~------~i~~ 54 (237)
T cd02526 1 AVVVTYN---PDLSKLKELLAALAEQ-----VDKVVVVDNSSGNDIELR-L----------RL-NSEKIE------LIHL 54 (237)
T ss_pred CEEEEec---CCHHHHHHHHHHHhcc-----CCEEEEEeCCCCccHHHH-h----------hc-cCCcEE------EEEC
Confidence 4699999 8778999999999975 357999999987732211 1 11 334555 8888
Q ss_pred CCCCCCCCCchhhHHHH------------HHHHHHHHHHHHHH
Q 025906 190 PENGDGDSGNAEFIVER------------EKIKEKYTEFKERV 220 (246)
Q Consensus 190 ~~~~~aKaGnln~a~~~------------~~~~~~y~~f~~ri 220 (246)
+.|.| +++..|.+++. |+|-....+++.+.
T Consensus 55 ~~n~G-~~~a~N~g~~~a~~~~~d~v~~lD~D~~~~~~~l~~l 96 (237)
T cd02526 55 GENLG-IAKALNIGIKAALENGADYVLLFDQDSVPPPDMVEKL 96 (237)
T ss_pred CCcee-hHHhhhHHHHHHHhCCCCEEEEECCCCCcCHhHHHHH
Confidence 88766 77778887764 34445557777776
No 65
>COG1216 Predicted glycosyltransferases [General function prediction only]
Probab=96.49 E-value=0.0075 Score=54.92 Aligned_cols=72 Identities=21% Similarity=0.318 Sum_probs=55.8
Q ss_pred CCceeEEEeccCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHHcCCCcCCCc
Q 025906 105 LPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICPE 184 (246)
Q Consensus 105 ~P~Vdv~V~tyNp~~E~~~vv~~Tl~~~~~ldYP~~kl~vyvlDDG~~d~t~~~~~ea~~~a~~w~~lc~~~gv~~r~p~ 184 (246)
-|.+.++|+||| +.+.+.+++.++.+.+||. ..++++|+|++|.|.+.+.+. + .-+|.
T Consensus 2 ~~~i~~iiv~yn----~~~~l~~~l~~l~~~~~~~--~~iv~vDn~s~d~~~~~~~~~---------~--~~~v~----- 59 (305)
T COG1216 2 MPKISIIIVTYN----RGEDLVECLASLAAQTYPD--DVIVVVDNGSTDGSLEALKAR---------F--FPNVR----- 59 (305)
T ss_pred CcceEEEEEecC----CHHHHHHHHHHHhcCCCCC--cEEEEccCCCCCCCHHHHHhh---------c--CCcEE-----
Confidence 378999999999 4478999999999999995 356689999999777665542 1 34666
Q ss_pred cceeCCCCCCCCCCc
Q 025906 185 AYFSDPENGDGDSGN 199 (246)
Q Consensus 185 ~Y~~r~~~~~aKaGn 199 (246)
++...+|.|.-+|+
T Consensus 60 -~i~~~~NlG~agg~ 73 (305)
T COG1216 60 -LIENGENLGFAGGF 73 (305)
T ss_pred -EEEcCCCccchhhh
Confidence 89888886654444
No 66
>KOG2977 consensus Glycosyltransferase [General function prediction only]
Probab=96.42 E-value=0.0084 Score=55.45 Aligned_cols=62 Identities=15% Similarity=0.138 Sum_probs=44.3
Q ss_pred ceeEEEeccCCCCCChHHHHHHHHHHhcCCCCC---CCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHHcCCC
Q 025906 107 GIDVFICTADPTKEPTVEVMNTVLSAMALDYPP---EKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIK 179 (246)
Q Consensus 107 ~Vdv~V~tyNp~~E~~~vv~~Tl~~~~~ldYP~---~kl~vyvlDDG~~d~t~~~~~ea~~~a~~w~~lc~~~gv~ 179 (246)
..+|+||+||..+-=+.++..++..+.. .|-. =+.+|.|+||||.|.|.+..- .+|+++|..
T Consensus 68 ~lsVIVpaynE~~ri~~mldeav~~le~-ry~~~~~F~~eiiVvddgs~d~T~~~a~----------k~s~K~~~d 132 (323)
T KOG2977|consen 68 YLSVIVPAYNEEGRIGAMLDEAVDYLEK-RYLSDKSFTYEIIVVDDGSTDSTVEVAL----------KFSRKLGDD 132 (323)
T ss_pred eeEEEEecCCcccchHHHHHHHHHHHHH-HhccCCCCceeEEEeCCCCchhHHHHHH----------HHHHHcCcc
Confidence 6899999999443335566667666543 3433 278999999999997766533 588899854
No 67
>KOG2978 consensus Dolichol-phosphate mannosyltransferase [General function prediction only]
Probab=95.96 E-value=0.007 Score=53.18 Aligned_cols=53 Identities=15% Similarity=0.096 Sum_probs=33.1
Q ss_pred CceeEEEeccCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHH
Q 025906 106 PGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMRE 161 (246)
Q Consensus 106 P~Vdv~V~tyNp~~E~~~vv~~Tl~~~~~ldYP~~kl~vyvlDDG~~d~t~~~~~e 161 (246)
+.-+|++|||| ++|...++-.-+.. .++=-.-+.+|+++||+|.|.|.+.+.+
T Consensus 3 ~kYsvilPtYn-Ek~Nlpi~~~li~~--~~~e~~~~~eiIivDD~SpDGt~~~a~~ 55 (238)
T KOG2978|consen 3 IKYSVILPTYN-EKENLPIITRLIAK--YMSEEGKKYEIIIVDDASPDGTQEVAKA 55 (238)
T ss_pred cceeEEecccc-CCCCCeeeHHHHHh--hhhhhcCceEEEEEeCCCCCccHHHHHH
Confidence 45689999999 22332233222222 2221233788999999999999877553
No 68
>PF03142 Chitin_synth_2: Chitin synthase; InterPro: IPR004835 Chitin synthase (2.4.1.16 from EC), also known as chitin-UDP acetyl-glucosaminyl transferase, is a plasma membrane-bound protein which catalyses the conversion of UDP-N-acettyl-D-glucosamine and {(1,4)-(N-acetyl- beta-D-glucosaminyl)}(N) to UDP and {(1,4)-(N-acetyl-beta-D- glucosaminyl)}(N+1). It plays a major role in cell wall biogenesis. ; GO: 0016758 transferase activity, transferring hexosyl groups
Probab=95.79 E-value=0.022 Score=56.77 Aligned_cols=45 Identities=18% Similarity=0.121 Sum_probs=40.5
Q ss_pred CCCceeEEEeccCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCC
Q 025906 104 QLPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGG 151 (246)
Q Consensus 104 ~~P~Vdv~V~tyNp~~E~~~vv~~Tl~~~~~ldYP~~kl~vyvlDDG~ 151 (246)
..+.+=.+||||| |..+-+++|+.|+...+||..+.-++|+.||-
T Consensus 23 ~~~~~i~~v~cy~---E~~~~l~~tldsl~~~~y~~~~k~~~vi~DG~ 67 (527)
T PF03142_consen 23 PDKFVICLVPCYS---EGEEELRTTLDSLATTDYDDSRKLIFVICDGM 67 (527)
T ss_pred CCceEEEEEcccc---CChHHHHHHHHHHHhcCCCCcccEEEEEcCcE
Confidence 4567888999999 99999999999999999999988899999973
No 69
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13.
Probab=95.79 E-value=0.029 Score=52.90 Aligned_cols=42 Identities=21% Similarity=0.316 Sum_probs=35.7
Q ss_pred eeEEEeccCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCc
Q 025906 108 IDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGAS 153 (246)
Q Consensus 108 Vdv~V~tyNp~~E~~~vv~~Tl~~~~~ldYP~~kl~vyvlDDG~~d 153 (246)
+-|+|.+|| - |+.+++||.++++..+-.+...|+|.+||+++
T Consensus 2 ~PVlv~ayN---R-p~~l~r~LesLl~~~p~~~~~~liIs~DG~~~ 43 (334)
T cd02514 2 IPVLVIACN---R-PDYLRRMLDSLLSYRPSAEKFPIIVSQDGGYE 43 (334)
T ss_pred cCEEEEecC---C-HHHHHHHHHHHHhccccCCCceEEEEeCCCch
Confidence 458899998 4 48999999999998744468899999999987
No 70
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ].
Probab=95.25 E-value=0.032 Score=50.35 Aligned_cols=96 Identities=13% Similarity=0.225 Sum_probs=57.5
Q ss_pred eEEEeccCCCCCChHHHHHH----HHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHHcCCCcCCCc
Q 025906 109 DVFICTADPTKEPTVEVMNT----VLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICPE 184 (246)
Q Consensus 109 dv~V~tyNp~~E~~~vv~~T----l~~~~~ldYP~~kl~vyvlDDG~~d~t~~~~~ea~~~a~~w~~lc~~~gv~~r~p~ 184 (246)
+|+||.+| ++...-+.++ +.++.... +..+++|+|+|||+++.+.+ ....+|++.+..
T Consensus 1 SiIIPv~~--~~~~~~i~~~l~~~l~~l~~~~-~~~~~eiIvvd~~s~~~~~~----------~l~~~~~~~~~~----- 62 (281)
T PF10111_consen 1 SIIIPVRN--RSERPDILERLRNCLESLSQFQ-SDPDFEIIVVDDGSSDEFDE----------ELKKLCEKNGFI----- 62 (281)
T ss_pred CEEEEecC--CccchHHHHHHHHHHHHHHhcC-CCCCEEEEEEECCCchhHHH----------HHHHHHhccCce-----
Confidence 58999999 3322223333 44444321 22489999999999983322 233678887755
Q ss_pred cceeCCCCC--CCCCCchhhHHHH---------HHHHHHHHHHHHHHHH
Q 025906 185 AYFSDPENG--DGDSGNAEFIVER---------EKIKEKYTEFKERVTR 222 (246)
Q Consensus 185 ~Y~~r~~~~--~aKaGnln~a~~~---------~~~~~~y~~f~~ri~~ 222 (246)
.|+..+++. -.+|...|.+... |+|-....+|+.++..
T Consensus 63 ~~i~~~~~~~~f~~a~arN~g~~~A~~d~l~flD~D~i~~~~~i~~~~~ 111 (281)
T PF10111_consen 63 RYIRHEDNGEPFSRAKARNIGAKYARGDYLIFLDADCIPSPDFIEKLLN 111 (281)
T ss_pred EEEEcCCCCCCcCHHHHHHHHHHHcCCCEEEEEcCCeeeCHHHHHHHHH
Confidence 255444331 1344556666543 7777777888887777
No 71
>PLN02893 Cellulose synthase-like protein
Probab=94.64 E-value=0.02 Score=58.92 Aligned_cols=58 Identities=9% Similarity=-0.162 Sum_probs=44.5
Q ss_pred CCccceeCCCC----CCCCCCchhhHHHH-------------HHHHHH-HHHHHHHHHHhhccC----------CCCCCC
Q 025906 182 CPEAYFSDPEN----GDGDSGNAEFIVER-------------EKIKEK-YTEFKERVTRAIEKW----------GLENEG 233 (246)
Q Consensus 182 ~p~~Y~~r~~~----~~aKaGnln~a~~~-------------~~~~~~-y~~f~~ri~~~~~~~----------~~~~~~ 233 (246)
.-..|++|+.+ +|+||||+|+++.. |+|+.+ -.+++++..-++.|. ++|++.
T Consensus 264 P~lvYvsReKrp~~~Hh~KAGaLN~llrvS~~~TngpfIl~lDcD~y~n~p~~l~~amcff~Dp~~~~~vafVQfPQ~F~ 343 (734)
T PLN02893 264 PNLIYVSREKSKNSPHHFKAGALNTLLRVSATMTNAPIILTLDCDMYSNDPQTPLRALCYLLDPSMDPKLGYVQFPQIFH 343 (734)
T ss_pred CceEEEeCCCCCCCCcccccchHHHHHHhhcccCCCCEEEEecCCcCCCchhHHHHHHHHhcCCCcCCceEEEeCccccc
Confidence 34559999987 59999999999874 888875 458999999887653 457777
Q ss_pred CCCCCC
Q 025906 234 ISRSRD 239 (246)
Q Consensus 234 ~~~~~~ 239 (246)
+..+.|
T Consensus 344 ~i~~~D 349 (734)
T PLN02893 344 GINKND 349 (734)
T ss_pred CCCcCC
Confidence 766553
No 72
>TIGR01556 rhamnosyltran L-rhamnosyltransferase. Rhamnolipids are glycolipids containing mono- or di- L-rhamnose molecules. Rhamnolipid synthesis occurs by sequential glycosyltransferase reactions involving two distinct rhamnosyltransferase enzymes. In P.aeruginosa, the synthesis of mono-rhamnolipids is catalyzed by rhamnosyltransferase 1, and proceeds by a glycosyltransfer reaction catalyzed by rhamnosyltransferase 2 to yield di-rhamnolipids.
Probab=93.77 E-value=0.092 Score=46.61 Aligned_cols=66 Identities=12% Similarity=-0.013 Sum_probs=41.4
Q ss_pred ccCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHHcCCCcCCCccceeCCCCC
Q 025906 114 TADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICPEAYFSDPENG 193 (246)
Q Consensus 114 tyNp~~E~~~vv~~Tl~~~~~ldYP~~kl~vyvlDDG~~d~t~~~~~ea~~~a~~w~~lc~~~gv~~r~p~~Y~~r~~~~ 193 (246)
||| .+.+.+.++|.++.... .+|+|+||||++. ..+.+. +...-+|. |+..+.|.
T Consensus 2 tyn---~~~~~l~~~l~sl~~q~-----~~iiVVDN~S~~~--~~~~~~---------~~~~~~i~------~i~~~~N~ 56 (281)
T TIGR01556 2 TFN---PDLEHLGELITSLPKQV-----DRIIAVDNSPHSD--QPLKNA---------RLRGQKIA------LIHLGDNQ 56 (281)
T ss_pred ccC---ccHHHHHHHHHHHHhcC-----CEEEEEECcCCCc--HhHHHH---------hccCCCeE------EEECCCCc
Confidence 899 44688999999988753 4799999998752 111111 11123466 88888775
Q ss_pred CCCCCchhhHHH
Q 025906 194 DGDSGNAEFIVE 205 (246)
Q Consensus 194 ~aKaGnln~a~~ 205 (246)
| .||..|.+++
T Consensus 57 G-~a~a~N~Gi~ 67 (281)
T TIGR01556 57 G-IAGAQNQGLD 67 (281)
T ss_pred c-hHHHHHHHHH
Confidence 4 3344555543
No 73
>KOG3738 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=93.63 E-value=0.1 Score=50.62 Aligned_cols=49 Identities=22% Similarity=0.205 Sum_probs=43.1
Q ss_pred CCCCceeEEEeccCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcc
Q 025906 103 DQLPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASI 154 (246)
Q Consensus 103 ~~~P~Vdv~V~tyNp~~E~~~vv~~Tl~~~~~ldYP~~kl~vyvlDDG~~d~ 154 (246)
.++|.-+|+|+-+| |....+-+||.++++-.=++=-.+|+++||+|.|.
T Consensus 121 ~dlp~TsviITfHN---EARS~LLRTv~SvlnrsP~~li~EiILVDD~S~Dp 169 (559)
T KOG3738|consen 121 VDLPPTSVIITFHN---EARSTLLRTVVSVLNRSPEHLIHEIILVDDFSQDP 169 (559)
T ss_pred cCCCCceEEEEecc---HHHHHHHHHHHHHHcCChHHhhheeEEecCCCCCh
Confidence 45799999999999 99999999999999977554477999999999984
No 74
>PLN02189 cellulose synthase
Probab=92.62 E-value=0.16 Score=54.07 Aligned_cols=56 Identities=7% Similarity=-0.073 Sum_probs=42.7
Q ss_pred ccceeCCCC----CCCCCCchhhHHHH-------------HHHHHHHH-HHHHHHHHhhccC----------CCCCCCCC
Q 025906 184 EAYFSDPEN----GDGDSGNAEFIVER-------------EKIKEKYT-EFKERVTRAIEKW----------GLENEGIS 235 (246)
Q Consensus 184 ~~Y~~r~~~----~~aKaGnln~a~~~-------------~~~~~~y~-~f~~ri~~~~~~~----------~~~~~~~~ 235 (246)
..|++|+.+ +|+||||+|..+.- |+|+.... +.+++.+-++-|. ++|+|.+.
T Consensus 500 LVYVSREKrPg~~Hh~KAGAMNaLlRVSavmTNaPfILNLDCDmY~Nns~alr~AMCfflDp~~g~~vAfVQFPQrF~~i 579 (1040)
T PLN02189 500 LVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNAPFMLNLDCDHYINNSKAVREAMCFLMDPQIGRKVCYVQFPQRFDGI 579 (1040)
T ss_pred eEEEeccCCCCCCcccchhhHHHHHHHhhhccCCCeEEEccCccccCchHHHHHhhhhhcCCccCceeEEEeCccccCCC
Confidence 569999954 78999999998743 77777765 8888888776543 67999887
Q ss_pred CCCC
Q 025906 236 RSRD 239 (246)
Q Consensus 236 ~~~~ 239 (246)
.+.|
T Consensus 580 ~k~D 583 (1040)
T PLN02189 580 DTHD 583 (1040)
T ss_pred CCCC
Confidence 7644
No 75
>PF13704 Glyco_tranf_2_4: Glycosyl transferase family 2
Probab=91.86 E-value=0.31 Score=36.47 Aligned_cols=36 Identities=28% Similarity=0.312 Sum_probs=29.3
Q ss_pred CChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHH
Q 025906 120 EPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMR 160 (246)
Q Consensus 120 E~~~vv~~Tl~~~~~ldYP~~kl~vyvlDDG~~d~t~~~~~ 160 (246)
|. ..|..-|..-+++.+- ++||+||||+|.|.+.+.
T Consensus 3 e~-~~L~~wl~~~~~lG~d----~i~i~d~~s~D~t~~~l~ 38 (97)
T PF13704_consen 3 EA-DYLPEWLAHHLALGVD----HIYIYDDGSTDGTREILR 38 (97)
T ss_pred hH-HHHHHHHHHHHHcCCC----EEEEEECCCCccHHHHHH
Confidence 66 7899999998888765 699999999997755544
No 76
>PLN02195 cellulose synthase A
Probab=88.19 E-value=0.33 Score=51.49 Aligned_cols=59 Identities=8% Similarity=-0.082 Sum_probs=43.7
Q ss_pred CCCccceeCCCC----CCCCCCchhhHHHH-------------HHHHHHHH-HHHHHHHHhhccC----------CCCCC
Q 025906 181 ICPEAYFSDPEN----GDGDSGNAEFIVER-------------EKIKEKYT-EFKERVTRAIEKW----------GLENE 232 (246)
Q Consensus 181 r~p~~Y~~r~~~----~~aKaGnln~a~~~-------------~~~~~~y~-~f~~ri~~~~~~~----------~~~~~ 232 (246)
-.-..|++|+.+ +|+||||+|..+.. |+|+.... +++++.+-++-|. ++|++
T Consensus 418 lP~LVYVSREKrPg~~Hh~KAGamNallrvSavmTNap~il~lDcDmy~n~s~~lr~AMCf~~D~~~g~~va~VQ~PQ~F 497 (977)
T PLN02195 418 LPRLVYVSREKRPGYQHHKKAGAENALVRVSAVLTNAPYILNLDCDHYVNNSKAVREAMCFLMDPVVGRDVCYVQFPQRF 497 (977)
T ss_pred CceeEEEeccCCCCCCcccccchhHHHHHHhhhccCCCeEEEecCccccCcHHHHHHHHhhccCcccCCeeEEEcCCccc
Confidence 445679999854 78999999887753 77876666 6999999877653 56888
Q ss_pred CCCCCCC
Q 025906 233 GISRSRD 239 (246)
Q Consensus 233 ~~~~~~~ 239 (246)
.+..+.|
T Consensus 498 ~~i~~~D 504 (977)
T PLN02195 498 DGIDRSD 504 (977)
T ss_pred CCCCCCC
Confidence 7765543
No 77
>KOG3736 consensus Polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=86.17 E-value=0.5 Score=47.72 Aligned_cols=49 Identities=27% Similarity=0.234 Sum_probs=43.2
Q ss_pred CCCCceeEEEeccCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcc
Q 025906 103 DQLPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASI 154 (246)
Q Consensus 103 ~~~P~Vdv~V~tyNp~~E~~~vv~~Tl~~~~~ldYP~~kl~vyvlDDG~~d~ 154 (246)
+.+|+++|+|+-+| |...++.+||.+..+..=|.--.+|+++||++...
T Consensus 139 ~~Lp~~Svii~f~n---E~~s~llRtv~Svi~rtp~~lLkEIiLVdD~S~~~ 187 (578)
T KOG3736|consen 139 DKLPTTSVIIIFHN---EAWSTLLRTVHSVINRTPPYLLKEIILVDDFSDRD 187 (578)
T ss_pred cccCCCceEEEEec---CCCcchhheEEeehccCChhHeEEEEEeecCcchh
Confidence 45899999999999 99999999999998877665578999999999763
No 78
>PLN02638 cellulose synthase A (UDP-forming), catalytic subunit
Probab=85.08 E-value=2 Score=46.29 Aligned_cols=106 Identities=12% Similarity=0.022 Sum_probs=61.5
Q ss_pred HHHHHHHHh--cCCCCCCCcEEEEEcCCCC-----cccHHHHHHHHHHhhchHH--HHHHcCCCcCCCccceeCCCC---
Q 025906 125 VMNTVLSAM--ALDYPPEKLHVYLSDDGGA-----SITLLGMREAWKFARSWLP--FCKRFGIKTICPEAYFSDPEN--- 192 (246)
Q Consensus 125 v~~Tl~~~~--~ldYP~~kl~vyvlDDG~~-----d~t~~~~~ea~~~a~~w~~--lc~~~gv~~r~p~~Y~~r~~~--- 192 (246)
.+..|.++. ...+|.+ -++++||+. ..--..+.++. |-. -...-|++ -.-..|++|+.+
T Consensus 459 ~k~RIe~l~a~~~~~p~~---~~~m~dgt~W~g~~~~dHp~IiqVl-----l~~~~~~d~~g~~-lP~LVYVSREKRPg~ 529 (1079)
T PLN02638 459 FKVRINGLVAKAQKVPEE---GWIMQDGTPWPGNNTRDHPGMIQVF-----LGHSGGLDTEGNE-LPRLVYVSREKRPGF 529 (1079)
T ss_pred HHHHHHHHHhhccccCCc---cccccCCccCCCCCCCCCHHHHHHH-----hcCCCcccccccc-ccceEEEecccCCCC
Confidence 455566554 7899975 388999981 00001122211 000 00012331 233469999954
Q ss_pred -CCCCCCchhhHHHH-------------HHHHHHH-HHHHHHHHHhhcc----------CCCCCCCCCCCCC
Q 025906 193 -GDGDSGNAEFIVER-------------EKIKEKY-TEFKERVTRAIEK----------WGLENEGISRSRD 239 (246)
Q Consensus 193 -~~aKaGnln~a~~~-------------~~~~~~y-~~f~~ri~~~~~~----------~~~~~~~~~~~~~ 239 (246)
+|+||||+|..+.- |+|+... -+.+++.+-++-| .++|+|.+..+.|
T Consensus 530 ~Hh~KAGAMNaLlRVSavmTNaPfILNLDCDmYiNns~alr~AMCf~lDp~~g~~vafVQFPQrF~~i~k~D 601 (1079)
T PLN02638 530 QHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFLMDPNLGKSVCYVQFPQRFDGIDRND 601 (1079)
T ss_pred CcccccchHHHHHHHhhhccCCCeEeecccCcccCchHHHHHhhhhhcCcccCCeeEEecCCcccCCCCCCC
Confidence 78999999988743 5665555 5677777766543 2568888876654
No 79
>KOG3737 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=79.94 E-value=4.9 Score=39.34 Aligned_cols=49 Identities=24% Similarity=0.201 Sum_probs=40.7
Q ss_pred CCCCCceeEEEeccCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCc
Q 025906 102 ADQLPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGAS 153 (246)
Q Consensus 102 ~~~~P~Vdv~V~tyNp~~E~~~vv~~Tl~~~~~ldYP~~kl~vyvlDDG~~d 153 (246)
++++|+++|+|--+| |.=..+.+||.+.+.-.=|+=--+|+++||-|..
T Consensus 151 pe~Lpt~SVviVFHN---EGws~LmRTVHSVi~RsP~~~l~eivlvDDfSdK 199 (603)
T KOG3737|consen 151 PENLPTSSVVIVFHN---EGWSTLMRTVHSVIKRSPRKYLAEIVLVDDFSDK 199 (603)
T ss_pred cccCCcceEEEEEec---CccHHHHHHHHHHHhcCcHHhhheEEEeccCCcc
Confidence 578999999999999 9999999999999876644434578888887765
No 80
>PF03071 GNT-I: GNT-I family; InterPro: IPR004139 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GNT-I, GLCNAC-T I) 2.4.1.101 from EC transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide. This is an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus, and is probably distributed in all tissues. The catalytic domain is located at the C terminus []. These proteins are members of the glycosyl transferase family 13 (GH13 from CAZY); GO: 0003827 alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0000139 Golgi membrane; PDB: 2APC_A 2AM4_A 1FO9_A 2AM3_A 1FOA_A 2AM5_A 1FO8_A.
Probab=76.99 E-value=2.6 Score=41.30 Aligned_cols=46 Identities=26% Similarity=0.436 Sum_probs=28.7
Q ss_pred CCCCceeEEEeccCCCCCChHHHHHHHHHHhcCCCCC-CCcEEEEEcCCCCc
Q 025906 103 DQLPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPP-EKLHVYLSDDGGAS 153 (246)
Q Consensus 103 ~~~P~Vdv~V~tyNp~~E~~~vv~~Tl~~~~~ldYP~-~kl~vyvlDDG~~d 153 (246)
...|.+-|+|-+|| -| +-+.+||.++++.. |. ++..|+|+.||+..
T Consensus 90 ~~~~~~pVlV~AcN---Rp-~yl~r~L~sLl~~r-p~~~~fpIiVSQDg~~~ 136 (434)
T PF03071_consen 90 NKEPVIPVLVFACN---RP-DYLRRTLDSLLKYR-PSAEKFPIIVSQDGDDE 136 (434)
T ss_dssp -------EEEEESS----T-T-HHHHHHHHHHH--S-TTTS-EEEEE-TT-H
T ss_pred cCCCcceEEEEecC---Cc-HHHHHHHHHHHHcC-CCCCCccEEEEecCCcH
Confidence 34678899999998 44 78999999999887 54 58889999999876
No 81
>KOG2547 consensus Ceramide glucosyltransferase [Lipid transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=76.37 E-value=16 Score=35.47 Aligned_cols=45 Identities=13% Similarity=0.260 Sum_probs=38.8
Q ss_pred CCCCceeEEEeccCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCc
Q 025906 103 DQLPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGAS 153 (246)
Q Consensus 103 ~~~P~Vdv~V~tyNp~~E~~~vv~~Tl~~~~~ldYP~~kl~vyvlDDG~~d 153 (246)
+.+|.|+|+-|--. -+ +-+..-+++...++|| +++...|=+.+.|
T Consensus 82 ~~LPgVSiikPl~G---~d-~nl~~Nlesffts~Y~--~~ElLfcv~s~eD 126 (431)
T KOG2547|consen 82 PKLPGVSIIKPLKG---VD-PNLYHNLESFFTSQYH--KYELLFCVESSED 126 (431)
T ss_pred CCCCCceEEeeccc---CC-chhHHhHHHHHhhccC--ceEEEEEEccCCC
Confidence 46999999999974 44 4678889999999999 9999999888888
No 82
>PLN02248 cellulose synthase-like protein
Probab=74.11 E-value=1.7 Score=46.86 Aligned_cols=58 Identities=10% Similarity=-0.075 Sum_probs=41.8
Q ss_pred CCCccceeCCCC----CCCCCCchhhHHHH--------------HHHHHHHHH-HHHHHHHhhcc--C-------CCCCC
Q 025906 181 ICPEAYFSDPEN----GDGDSGNAEFIVER--------------EKIKEKYTE-FKERVTRAIEK--W-------GLENE 232 (246)
Q Consensus 181 r~p~~Y~~r~~~----~~aKaGnln~a~~~--------------~~~~~~y~~-f~~ri~~~~~~--~-------~~~~~ 232 (246)
-.-..|++|+.+ +|+||||+ ||+.| |+|+..+.. .+++.+-++-| | ++|||
T Consensus 584 lP~LVYVSREKRPg~~Hh~KAGAM-NALlRVSavmTNgPfILNLDCDmYiNns~alr~AMCf~lD~~g~~vAfVQFPQrF 662 (1135)
T PLN02248 584 LPMLVYVSREKRPGYDHNKKAGAM-NALVRASAIMSNGPFILNLDCDHYIYNSLAIREGMCFMMDRGGDRICYVQFPQRF 662 (1135)
T ss_pred cceeEEEecccCCCCCcccccchh-hhHHHhhhhccCCCeEEEeccCcccCCchhHHhcchheecCCCCceEEEcCCccc
Confidence 344679999854 78999999 67665 778776665 77777766544 2 56888
Q ss_pred CCCCCCC
Q 025906 233 GISRSRD 239 (246)
Q Consensus 233 ~~~~~~~ 239 (246)
.+..+.|
T Consensus 663 ~~I~k~D 669 (1135)
T PLN02248 663 EGIDPSD 669 (1135)
T ss_pred CCCCCCC
Confidence 8876654
No 83
>PF03452 Anp1: Anp1; InterPro: IPR005109 The members of this family (Anp1, Van1 and Mnn9) are membrane proteins required for proper Golgi function. These proteins colocalize within the cis Golgi, where they are physically associated in two distinct complexes [].
Probab=61.56 E-value=19 Score=33.13 Aligned_cols=56 Identities=13% Similarity=0.095 Sum_probs=43.5
Q ss_pred CCCCceeEEEeccCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCC--cccHHHHHHH
Q 025906 103 DQLPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGA--SITLLGMREA 162 (246)
Q Consensus 103 ~~~P~Vdv~V~tyNp~~E~~~vv~~Tl~~~~~ldYP~~kl~vyvlDDG~~--d~t~~~~~ea 162 (246)
.+-++|=|+.|--| ++ ..+..=+..+.+++||++.+++-++-.-++ +.|.+.+.++
T Consensus 22 ~~~e~VLILtplrn--a~--~~l~~y~~~L~~L~YP~~lIsLgfLv~d~~e~d~t~~~l~~~ 79 (269)
T PF03452_consen 22 RNKESVLILTPLRN--AA--SFLPDYFDNLLSLTYPHELISLGFLVSDSSEFDNTLKILEAA 79 (269)
T ss_pred ccCCeEEEEEecCC--ch--HHHHHHHHHHHhCCCCchheEEEEEcCCCchhHHHHHHHHHH
Confidence 44689999999987 33 479999999999999999999966665566 6666665543
No 84
>COG4097 Predicted ferric reductase [Inorganic ion transport and metabolism]
Probab=55.20 E-value=53 Score=32.08 Aligned_cols=68 Identities=13% Similarity=0.254 Sum_probs=45.2
Q ss_pred CCCceeEEEeccCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHHcCCCcCCC
Q 025906 104 QLPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICP 183 (246)
Q Consensus 104 ~~P~Vdv~V~tyNp~~E~~~vv~~Tl~~~~~ldYP~~kl~vyvlDDG~~d~t~~~~~ea~~~a~~w~~lc~~~gv~~r~p 183 (246)
.-|+|++|-|+.| +++++-.+-+++... .-| ++.++++|-+.++. .. + +--++++-++|.|
T Consensus 342 s~~~V~L~Y~~~n---~e~~~y~~eLr~~~q-kl~--~~~lHiiDSs~~g~-l~--~----------e~ler~~~~~~~~ 402 (438)
T COG4097 342 SDPPVHLFYCSRN---WEEALYAEELRALAQ-KLP--NVVLHIIDSSKDGY-LD--Q----------EDLERYPDRPRTR 402 (438)
T ss_pred cCCceEEEEEecC---CchhHHHHHHHHHHh-cCC--CeEEEEecCCCCCc-cC--H----------HHhhccccccCcc
Confidence 4589999999999 776777778877664 233 77888866555441 11 1 1224457778888
Q ss_pred ccceeCC
Q 025906 184 EAYFSDP 190 (246)
Q Consensus 184 ~~Y~~r~ 190 (246)
..||--|
T Consensus 403 sv~fCGP 409 (438)
T COG4097 403 SVFFCGP 409 (438)
T ss_pred eEEEEcC
Confidence 8898433
No 85
>PF11712 Vma12: Endoplasmic reticulum-based factor for assembly of V-ATPase; InterPro: IPR021013 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. V-ATPases (also known as V1V0-ATPase or vacuolar ATPase) (3.6.3.14 from EC) are found in the eukaryotic endomembrane system, and in the plasma membrane of prokaryotes and certain specialised eukaryotic cells. V-ATPases hydrolyse ATP to drive a proton pump, and are involved in a variety of vital intra- and inter-cellular processes such as receptor mediated endocytosis, protein trafficking, active transport of metabolites, homeostasis and neurotransmitter release []. V-ATPases are composed of two linked complexes: the V1 complex (subunits A-H) contains the catalytic core that hydrolyses ATP, while the V0 complex (subunits a, c, c', c'', d) forms the membrane-spanning pore. V-ATPases may have an additional role in membrane fusion through binding to t-SNARE proteins []. The yeast vacuolar proton-translocating ATPase (V-ATPase) is the best characterised member of the V-ATPase family. A total of thirteen genes are required for encoding the subunits of the enzyme complex itself and an additional three for providing factors necessary for the assembly of the whole. Vma12 is one of these latter, all three of which are localised to the endoplasmic reticulum [].
Probab=49.79 E-value=40 Score=27.58 Aligned_cols=20 Identities=35% Similarity=0.497 Sum_probs=12.7
Q ss_pred chhHHHHHHHHHHHHHHHHH
Q 025906 60 APLLPWLLVFAAELLLSFQW 79 (246)
Q Consensus 60 ~~~~~wi~l~~aE~~~~~~~ 79 (246)
.+.+++++.++||++++...
T Consensus 115 lgl~~al~vlvAEv~l~~~y 134 (142)
T PF11712_consen 115 LGLFGALLVLVAEVVLYIRY 134 (142)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 34455666678888866553
No 86
>PF01644 Chitin_synth_1: Chitin synthase; InterPro: IPR004834 This region is found commonly in chitin synthases classes I, II and III 2.4.1.16 from EC. Chitin a linear homopolymer of GlcNAc residues, it is an important component of the cell wall of fungi and is synthesised on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases []. ; GO: 0004100 chitin synthase activity, 0006031 chitin biosynthetic process
Probab=47.83 E-value=40 Score=28.83 Aligned_cols=37 Identities=24% Similarity=0.346 Sum_probs=28.3
Q ss_pred cCCCCCChHHHHHHHHHHhc-----------CCCCC---CCcEEEEEcCCCCcc
Q 025906 115 ADPTKEPTVEVMNTVLSAMA-----------LDYPP---EKLHVYLSDDGGASI 154 (246)
Q Consensus 115 yNp~~E~~~vv~~Tl~~~~~-----------ldYP~---~kl~vyvlDDG~~d~ 154 (246)
|| |+...+.+|+.+++. -.+.. .|+-|.|+-||....
T Consensus 2 YN---Ed~~ll~rTL~gv~~Ni~~l~~r~~s~~wG~d~WkkiVVcIv~DGr~ki 52 (163)
T PF01644_consen 2 YN---EDEILLARTLHGVMKNIAHLCSRKRSKTWGKDAWKKIVVCIVSDGRAKI 52 (163)
T ss_pred CC---CCHHHHHHHHHHHHHHHHHHHhCCcCCcCCCCCCcEEEEEEEecCcccC
Confidence 88 999999999998543 22322 288999999999864
No 87
>KOG4518 consensus Hydroxypyruvate isomerase [Carbohydrate transport and metabolism]
Probab=43.63 E-value=50 Score=29.64 Aligned_cols=92 Identities=17% Similarity=0.141 Sum_probs=52.2
Q ss_pred CceeEEEeccCCCCCChHHHHHH-----HHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHHHHhhchH---HHHHHcC
Q 025906 106 PGIDVFICTADPTKEPTVEVMNT-----VLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWL---PFCKRFG 177 (246)
Q Consensus 106 P~Vdv~V~tyNp~~E~~~vv~~T-----l~~~~~ldYP~~kl~vyvlDDG~~d~t~~~~~ea~~~a~~w~---~lc~~~g 177 (246)
-.|.|=+| ++||.++++.. +.+.+..-.|.+ =|||..-.|-.--++ ++||+.+. ++++.+|
T Consensus 31 ~~vev~~p----~~e~a~~~~~~~~~~~~~~~~~~a~~~~------~d~~~~G~~svpg~~-k~FR~~Ld~ai~yAkalg 99 (264)
T KOG4518|consen 31 KLVEVSIP----YTEPAEKLREAADEYHLKHTLINAPPGN------WDDGFRGLASVPGAK-KEFRKSLDTAIEYAKALG 99 (264)
T ss_pred eEEEecCC----CCChHHHHHHhhhcchhhhhhccCCCCC------hhhhccCcccCCchH-HHHHHHHHHHHHHHHHhC
Confidence 34555444 45998777653 445555666653 355555433222222 35666554 6999999
Q ss_pred CCcCCCccceeCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHH
Q 025906 178 IKTICPEAYFSDPENGDGDSGNAEFIVEREKIKEKYTEFKERV 220 (246)
Q Consensus 178 v~~r~p~~Y~~r~~~~~aKaGnln~a~~~~~~~~~y~~f~~ri 220 (246)
|. =+ |--||-..-..|+..+.+.|-+=++.-
T Consensus 100 C~------rI------HlmAG~~k~g~d~~~~~~ty~eNlr~A 130 (264)
T KOG4518|consen 100 CC------RI------HLMAGIPKSGDDLENAHQTYSENLRFA 130 (264)
T ss_pred Cc------eE------EEeccCCCCCchHHHHHHHHHHHHHHH
Confidence 98 33 444555555556666666665544443
No 88
>PRK11509 hydrogenase-1 operon protein HyaE; Provisional
Probab=41.04 E-value=42 Score=27.59 Aligned_cols=47 Identities=15% Similarity=0.268 Sum_probs=31.4
Q ss_pred CChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHHcCCCcCCCccce
Q 025906 120 EPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICPEAYF 187 (246)
Q Consensus 120 E~~~vv~~Tl~~~~~ldYP~~kl~vyvlDDG~~d~t~~~~~ea~~~a~~w~~lc~~~gv~~r~p~~Y~ 187 (246)
-+..++-..+ +-.|+..++.++.+|.-..+ .++.++||..-.-...|
T Consensus 52 ~D~avvleEL----a~e~~~~~v~~akVDiD~~~-----------------~LA~~fgV~siPTLl~F 98 (132)
T PRK11509 52 SDNPVMIGEL----LREFPDYTWQVAIADLEQSE-----------------AIGDRFGVFRFPATLVF 98 (132)
T ss_pred ccHHHHHHHH----HHHhcCCceEEEEEECCCCH-----------------HHHHHcCCccCCEEEEE
Confidence 3344444444 44777667999999975554 78999999955544455
No 89
>PF11215 DUF3010: Protein of unknown function (DUF3010); InterPro: IPR021378 This family of proteins with unknown function appears to be restricted to Gammaproteobacteria.
Probab=39.28 E-value=48 Score=27.69 Aligned_cols=55 Identities=18% Similarity=0.294 Sum_probs=38.5
Q ss_pred CCCCCC-CcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHHcCCCcCCCccceeCCCCCCCCCCch
Q 025906 135 LDYPPE-KLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICPEAYFSDPENGDGDSGNA 200 (246)
Q Consensus 135 ldYP~~-kl~vyvlDDG~~d~t~~~~~ea~~~a~~w~~lc~~~gv~~r~p~~Y~~r~~~~~aKaGnl 200 (246)
.+.|.- .-++-+.||.++. ++++|......||++++|. ...+.+....|.-||.-
T Consensus 25 ~~~pdcr~~k~~l~~~~~~~-------~vr~Fq~~f~kl~~dy~Vd----~VvIk~R~~KGKfAGga 80 (138)
T PF11215_consen 25 FQLPDCRVRKFSLSDDNSTE-------EVRKFQFTFAKLMEDYKVD----KVVIKERATKGKFAGGA 80 (138)
T ss_pred eECCccceeEEEcCCCccHH-------HHHHHHHHHHHHHHHcCCC----EEEEEecccCCCccCCc
Confidence 344543 3455566666665 7788888888999999999 55666555678888774
No 90
>PRK13964 coaD phosphopantetheine adenylyltransferase; Provisional
Probab=35.75 E-value=99 Score=25.55 Aligned_cols=59 Identities=10% Similarity=0.239 Sum_probs=33.7
Q ss_pred EEEeccCCCCCChH--HHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHHcCCCcCCCccce
Q 025906 110 VFICTADPTKEPTV--EVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICPEAYF 187 (246)
Q Consensus 110 v~V~tyNp~~E~~~--vv~~Tl~~~~~ldYP~~kl~vyvlDDG~~d~t~~~~~ea~~~a~~w~~lc~~~gv~~r~p~~Y~ 187 (246)
+++++.||.|.+.- --+-.+....--++| +++|....||= .+.+|++.|+. |+
T Consensus 32 ~v~v~~np~K~~~~s~e~R~~~l~~~~~~~~--~v~v~~~~~~l-----------------~v~~~~~~~a~------~i 86 (140)
T PRK13964 32 YVVVSINPDKSNASDLDSRFKNVKNKLKDFK--NVEVLINENKL-----------------TAEIAKKLGAN------FL 86 (140)
T ss_pred EEEeccCCCCCCCCCHHHHHHHHHHHHcCCC--CcEEecCcCCc-----------------HHHHHHHCCCe------EE
Confidence 45667787765311 111122222223566 55665444543 23799999999 99
Q ss_pred eCCCCC
Q 025906 188 SDPENG 193 (246)
Q Consensus 188 ~r~~~~ 193 (246)
-|.-+.
T Consensus 87 vrGlR~ 92 (140)
T PRK13964 87 IRSARN 92 (140)
T ss_pred EEecCC
Confidence 998653
No 91
>PF14979 TMEM52: Transmembrane 52
Probab=30.68 E-value=2.3e+02 Score=24.00 Aligned_cols=34 Identities=21% Similarity=0.269 Sum_probs=26.9
Q ss_pred CCCCceeEEEeccCCCCCChHHHHHHHHHHhcCCCCCC
Q 025906 103 DQLPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPE 140 (246)
Q Consensus 103 ~~~P~Vdv~V~tyNp~~E~~~vv~~Tl~~~~~ldYP~~ 140 (246)
...+.-|+=|=+.| .+ .-+..||.+..+..||..
T Consensus 59 ~~~~P~~~TVia~D---~D-St~hsTvTS~sSVq~P~~ 92 (154)
T PF14979_consen 59 PAPQPYEVTVIAVD---SD-STLHSTVTSYSSVQYPAG 92 (154)
T ss_pred CCCCCceEEEEecc---CC-ccccchhhhhhccccccc
Confidence 34567777777886 33 689999999999999984
No 92
>PF11248 DUF3046: Protein of unknown function (DUF3046); InterPro: IPR021408 This family of proteins with unknown function appears to be restricted to Actinobacteria.
Probab=30.62 E-value=32 Score=24.91 Aligned_cols=14 Identities=21% Similarity=0.795 Sum_probs=12.0
Q ss_pred hhchHHHHHHcCCC
Q 025906 166 ARSWLPFCKRFGIK 179 (246)
Q Consensus 166 a~~w~~lc~~~gv~ 179 (246)
+..|.++|+.++|.
T Consensus 47 r~VW~AlC~~~dVP 60 (63)
T PF11248_consen 47 RDVWRALCDAFDVP 60 (63)
T ss_pred HHHHHHHHHHcCCC
Confidence 35699999999987
No 93
>cd06432 GT8_HUGT1_C_like The C-terminal domain of HUGT1-like is highly homologous to the GT 8 family. C-terminal domain of glycoprotein glucosyltransferase (UGT). UGT is a large glycoprotein whose C-terminus contains the catalytic activity. This catalytic C-terminal domain is highly homologous to Glycosyltransferase Family 8 (GT 8) and contains the DXD motif that coordinates donor sugar binding, characteristic for Family 8 glycosyltransferases. GT 8 proteins are retaining enzymes based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. The non-catalytic N-terminal portion of the human UTG1 (HUGT1) has been shown to monitor the protein folding status and activate its glucosyltransferase activity.
Probab=29.01 E-value=1.6e+02 Score=26.25 Aligned_cols=45 Identities=13% Similarity=0.138 Sum_probs=30.2
Q ss_pred HHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHHcCCC
Q 025906 123 VEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIK 179 (246)
Q Consensus 123 ~vv~~Tl~~~~~ldYP~~kl~vyvlDDG~~d~t~~~~~ea~~~a~~w~~lc~~~gv~ 179 (246)
.-+.-++.|++.=. ...+++||++||-++. ..+....+|+++|+.
T Consensus 14 ~~~~v~l~Sll~nn--~~~~~fyil~~~is~e----------~~~~l~~~~~~~~~~ 58 (248)
T cd06432 14 RFLRIMMLSVMKNT--KSPVKFWFIKNFLSPQ----------FKEFLPEMAKEYGFE 58 (248)
T ss_pred HHHHHHHHHHHHcC--CCCEEEEEEeCCCCHH----------HHHHHHHHHHHhCCc
Confidence 34666777776433 2479999999998872 222334688888875
No 94
>cd02742 GH20_hexosaminidase Beta-N-acetylhexosaminidases of glycosyl hydrolase family 20 (GH20) catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. These enzymes are broadly distributed in microorganisms, plants and animals, and play roles in various key physiological and pathological processes. These processes include cell structural integrity, energy storage, cellular signaling, fertilization, pathogen defense, viral penetration, the development of carcinomas, inflammatory events and lysosomal storage disorders. The GH20 enzymes include the eukaryotic beta-N-acetylhexosaminidases A and B, the bacterial chitobiases, dispersin B, and lacto-N-biosidase. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by the solvent or the enzyme, but by the substrate itself.
Probab=28.91 E-value=1.4e+02 Score=27.36 Aligned_cols=28 Identities=18% Similarity=0.158 Sum_probs=22.7
Q ss_pred CChHHHHHHHHHHhcCCCCCCCcEEEEEcC
Q 025906 120 EPTVEVMNTVLSAMALDYPPEKLHVYLSDD 149 (246)
Q Consensus 120 E~~~vv~~Tl~~~~~ldYP~~kl~vyvlDD 149 (246)
-+++.|.+.|..+....+= .++.++.||
T Consensus 13 ~~~~~lk~~id~ma~~K~N--~lhlHl~D~ 40 (303)
T cd02742 13 LSVESIKRTIDVLARYKIN--TFHWHLTDD 40 (303)
T ss_pred cCHHHHHHHHHHHHHhCCc--EEEEeeecC
Confidence 3567888888888877765 899999998
No 95
>PLN02190 cellulose synthase-like protein
Probab=28.31 E-value=37 Score=35.63 Aligned_cols=24 Identities=21% Similarity=0.254 Sum_probs=18.2
Q ss_pred CCccceeCCC----CCCCCCCchhhHHH
Q 025906 182 CPEAYFSDPE----NGDGDSGNAEFIVE 205 (246)
Q Consensus 182 ~p~~Y~~r~~----~~~aKaGnln~a~~ 205 (246)
.-..|++|+. ++|+|||++|..+.
T Consensus 252 P~LVYvSREKrP~~~Hh~KAGAmNaLlR 279 (756)
T PLN02190 252 PHLVYISREKRPNYLHHYKAGAMNFLVR 279 (756)
T ss_pred ceEEEEeccCCCCCCcccccchhHHHHH
Confidence 3467999964 47899999987654
No 96
>PTZ00331 alpha/beta hydrolase; Provisional
Probab=26.69 E-value=2.2e+02 Score=24.57 Aligned_cols=45 Identities=24% Similarity=0.361 Sum_probs=32.4
Q ss_pred eEEEeccCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHH
Q 025906 109 DVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREA 162 (246)
Q Consensus 109 dv~V~tyNp~~E~~~vv~~Tl~~~~~ldYP~~kl~vyvlDDG~~d~t~~~~~ea 162 (246)
.|+|+-.. -.-.|..|+.++....|. |+|+.|++.....+...++
T Consensus 148 ~lvi~G~~----t~~CV~~Ta~~a~~~g~~-----v~vv~Da~~~~~~~~~~~a 192 (212)
T PTZ00331 148 RVFICGLA----FDFCVLFTALDAVKLGFK-----VVVLEDATRAVDPDAISKQ 192 (212)
T ss_pred EEEEEEec----cCHHHHHHHHHHHHCCCE-----EEEeCcCccCCCHHHHHHH
Confidence 45555552 336788899999988775 9999999998765554443
No 97
>COG4226 HicB Predicted nuclease of the RNAse H fold, HicB family [General function prediction only]
Probab=26.34 E-value=1.1e+02 Score=24.59 Aligned_cols=43 Identities=16% Similarity=0.113 Sum_probs=24.9
Q ss_pred EEEEEcCCCCcccHHH--HHHHHHH-hhchHHHHHHcCCCcCCCcc
Q 025906 143 HVYLSDDGGASITLLG--MREAWKF-ARSWLPFCKRFGIKTICPEA 185 (246)
Q Consensus 143 ~vyvlDDG~~d~t~~~--~~ea~~~-a~~w~~lc~~~gv~~r~p~~ 185 (246)
.+..+.||.+...... ++.+-+. -+...++|++.|++||.|+.
T Consensus 25 ~~~g~~~~~~f~~~sv~~lk~~~~~s~~~yle~C~~~g~EP~k~~S 70 (111)
T COG4226 25 EFVGLSGVIDFQGDSVKGLKKEGELSLDDYLEFCKERGIEPRKPYS 70 (111)
T ss_pred cccccccccCchhhhHHHHHHHHHhhHHHHHHHHHHcCCCCccccC
Confidence 4556778877643322 1111000 12345899999999887765
No 98
>cd06431 GT8_LARGE_C LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis. The catalytic domain of LARGE is a putative glycosyltransferase. Mutations of LARGE in mouse and human cause dystroglycanopathies, a disease associated with hypoglycosylation of the membrane protein alpha-dystroglycan (alpha-DG) and consequent loss of extracellular ligand binding. LARGE needs to both physically interact with alpha-dystroglycan and function as a glycosyltransferase in order to stimulate alpha-dystroglycan hyperglycosylation. LARGE localizes to the Golgi apparatus and contains three conserved DxD motifs. While two of the motifs are indispensible for glycosylation function, one is important for localization of th eenzyme. LARGE was originally named because it covers approximately large trunck of genomic DNA, more than 600bp long. The predicted protein structure contains an N-terminal cytoplasmic domain, a transmembrane region, a coiled-coil
Probab=24.77 E-value=1.6e+02 Score=26.88 Aligned_cols=43 Identities=19% Similarity=0.164 Sum_probs=29.1
Q ss_pred ceeEEEeccCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCccc
Q 025906 107 GIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASIT 155 (246)
Q Consensus 107 ~Vdv~V~tyNp~~E~~~vv~~Tl~~~~~ldYP~~kl~vyvlDDG~~d~t 155 (246)
+|.|+.+..| =...+..++.|++.= ....+++||++|+-+...
T Consensus 2 ~~~iv~~~~~----y~~~~~~~i~Sil~n--~~~~~~fhii~d~~s~~~ 44 (280)
T cd06431 2 HVAIVCAGYN----ASRDVVTLVKSVLFY--RRNPLHFHLITDEIARRI 44 (280)
T ss_pred EEEEEEccCC----cHHHHHHHHHHHHHc--CCCCEEEEEEECCcCHHH
Confidence 3566666633 235678888888643 345689999999887643
No 99
>cd06570 GH20_chitobiase-like_1 A functionally uncharacterized subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the chitobiase of Serratia marcescens, a beta-N-1,4-acetylhexosaminidase that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This subgroup lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=23.76 E-value=2e+02 Score=26.78 Aligned_cols=50 Identities=22% Similarity=0.337 Sum_probs=35.9
Q ss_pred ChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCC------------------cccHHHHHHHHHHhhchHHHHHHcCCC
Q 025906 121 PTVEVMNTVLSAMALDYPPEKLHVYLSDDGGA------------------SITLLGMREAWKFARSWLPFCKRFGIK 179 (246)
Q Consensus 121 ~~~vv~~Tl~~~~~ldYP~~kl~vyvlDDG~~------------------d~t~~~~~ea~~~a~~w~~lc~~~gv~ 179 (246)
+++.|.+.|..+....+= .++.++.||-+- -.|.+.++| .+++|+++||+
T Consensus 16 ~~~~ik~~Id~ma~~KlN--~lh~HltDd~~~rle~~~~P~lt~~g~~~~~yT~~di~e-------lv~yA~~rgI~ 83 (311)
T cd06570 16 PVAVIKRQLDAMASVKLN--VFHWHLTDDQGFRIESKKYPKLQQKASDGLYYTQEQIRE-------VVAYARDRGIR 83 (311)
T ss_pred CHHHHHHHHHHHHHhCCe--EEEEEEecCCCceeecCCCccccccCCCCCccCHHHHHH-------HHHHHHHcCCE
Confidence 568899999888877765 899999999322 133334444 45899999986
No 100
>PF04896 AmoC: Ammonia monooxygenase/methane monooxygenase, subunit C; InterPro: IPR006980 Ammonia monooxygenase and the particulate methane monooxygenase are both integral membrane proteins, occurring in ammonia oxidisers and methanotrophs respectively, which are thought to be evolutionarily related []. These enzymes have a relatively wide substrate specificity and can catalyse the oxidation of a range of substrates including ammonia, methane, halogenated hydrocarbons and aromatic molecules []. These enzymes are composed of 3 subunits - A (IPR003393 from INTERPRO), B (IPR006833 from INTERPRO) and C (IPR006980 from INTERPRO) - and contain various metal centres, including copper. Particulate methane monooxygenase from Methylococcus capsulatus str. Bath is an ABC homotrimer, which contains mononuclear and dinuclear copper metal centres, and a third metal centre containing a metal ion whose identity in vivo is not certain[]. The C subunit from Methylococcus capsulatus str. Bath resides primarily in the membrane and consists of five transmembrane helices. Several conserved residues contribute to a metal binding centre [].; PDB: 1YEW_G 3RFR_K 3RGB_G 3CHX_C.
Probab=22.90 E-value=2.2e+02 Score=26.08 Aligned_cols=61 Identities=18% Similarity=0.200 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHHHHHHhhhc-------ccCCCCCcchhHHHHHHHHHHHHHHHHHHH-HHHHhhcccCCC
Q 025906 31 SLVLLHFTSLAFLVYYRVSYF-------FQVSNARAAPLLPWLLVFAAELLLSFQWLL-GIAYRWRPISRT 93 (246)
Q Consensus 31 ~~~~~~l~~~~~Yl~wR~~~t-------l~~~~~~~~~~~~wi~l~~aE~~~~~~~lL-~~~~~~~p~~r~ 93 (246)
-+.+..++.++.|+.||+..- ++...+ .---+|..++..|+..-....+ ..-..|+..+|.
T Consensus 20 ~~~~g~~~~~~~y~~~r~Yq~~fa~~~GLDs~~P--eF~~yWm~ll~~e~~l~~~~~~~~~g~lWktrdr~ 88 (251)
T PF04896_consen 20 PMWIGIIALLVFYIGVRWYQQAFAWSAGLDSFSP--EFQTYWMNLLYTELVLEPIVALALWGYLWKTRDRN 88 (251)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHTTTSS-TTSC--CHHHHTHHHHHHHHHHHHHHHHHHHHHHHHTS-ST
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCh--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 344455555677888887643 211111 1234677777777765433222 223356654443
No 101
>PF10883 DUF2681: Protein of unknown function (DUF2681); InterPro: IPR020274 This entry contains membrane proteins with no known function.
Probab=22.44 E-value=99 Score=23.78 Aligned_cols=15 Identities=7% Similarity=0.224 Sum_probs=10.1
Q ss_pred HHHHHHHHHHHHhhh
Q 025906 36 HFTSLAFLVYYRVSY 50 (246)
Q Consensus 36 ~l~~~~~Yl~wR~~~ 50 (246)
++++++.|++|++-.
T Consensus 13 v~~~i~~y~~~k~~k 27 (87)
T PF10883_consen 13 VVALILAYLWWKVKK 27 (87)
T ss_pred HHHHHHHHHHHHHHH
Confidence 333456799998765
No 102
>KOG1413 consensus N-acetylglucosaminyltransferase I [Carbohydrate transport and metabolism]
Probab=21.31 E-value=2.1e+02 Score=27.88 Aligned_cols=46 Identities=20% Similarity=0.264 Sum_probs=38.1
Q ss_pred CCceeEEEeccCCCCCChHHHHHHHHHHhcCCCCC-CCcEEEEEcCCCCccc
Q 025906 105 LPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPP-EKLHVYLSDDGGASIT 155 (246)
Q Consensus 105 ~P~Vdv~V~tyNp~~E~~~vv~~Tl~~~~~ldYP~-~kl~vyvlDDG~~d~t 155 (246)
-|-+-|+|=+|| .++-|++++..++... |. +++-|+|.-||+...+
T Consensus 66 ~~v~pvvVf~cs----R~~~lr~~v~kll~yr-PsaekfpiiVSQD~~~e~v 112 (411)
T KOG1413|consen 66 PPVIPVVVFACS----RADALRRHVKKLLEYR-PSAEKFPIIVSQDCEKEAV 112 (411)
T ss_pred CCceeEEEEecC----cHHHHHHHHHHHHHhC-cchhhcCEEEeccCCcHHH
Confidence 356678888897 4589999999999999 65 6999999999998733
No 103
>PF02009 Rifin_STEVOR: Rifin/stevor family; InterPro: IPR002858 Malaria is still a major cause of mortality in many areas of the world. Plasmodium falciparum causes the most severe human form of the disease and is responsible for most fatalities. Severe cases of malaria can occur when the parasite invades and then proliferates within red blood cell erythrocytes. The parasite produces many variant antigenic proteins, encoded by multigene families, which are present on the surface of the infected erythrocyte and play important roles in virulence. A crucial survival mechanism for the malaria parasite is its ability to evade the immune response by switching these variant surface antigens. The high virulence of P. falciparum relative to other malarial parasites is in large part due to the fact that in this organism many of these surface antigens mediate the binding of infected erythrocytes to the vascular endothelium (cytoadherence) and non-infected erythrocytes (rosetting). This can lead to the accumulation of infected cells in the vasculature of a variety of organs, blocking the blood flow and reducing the oxygen supply. Clinical symptoms of severe infection can include fever, progressive anaemia, multi-organ dysfunction and coma. For more information see []. Several multicopy gene families have been described in Plasmodium falciparum, including the stevor family of subtelomeric open reading frames and the rif interspersed repetitive elements. Both families contain three predicted transmembrane segments. It has been proposed that stevor and rif are members of a larger superfamily that code for variant surface antigens [].
Probab=21.28 E-value=85 Score=29.34 Aligned_cols=9 Identities=11% Similarity=0.250 Sum_probs=6.9
Q ss_pred HHHHHHHHh
Q 025906 40 LAFLVYYRV 48 (246)
Q Consensus 40 ~~~Yl~wR~ 48 (246)
+++||+||-
T Consensus 273 vIIYLILRY 281 (299)
T PF02009_consen 273 VIIYLILRY 281 (299)
T ss_pred HHHHHHHHH
Confidence 467999984
No 104
>PRK15171 lipopolysaccharide 1,3-galactosyltransferase; Provisional
Probab=21.03 E-value=3.1e+02 Score=25.63 Aligned_cols=44 Identities=11% Similarity=0.044 Sum_probs=30.4
Q ss_pred CceeEEEeccCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCc
Q 025906 106 PGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGAS 153 (246)
Q Consensus 106 P~Vdv~V~tyNp~~E~~~vv~~Tl~~~~~ldYP~~kl~vyvlDDG~~d 153 (246)
..++|+.++=+ .=..-+.-++.|++.=+ |...+++||++||-++
T Consensus 24 ~~i~Iv~~~D~---ny~~~~~vsi~Sil~nn-~~~~~~f~Il~~~is~ 67 (334)
T PRK15171 24 NSLDIAYGIDK---NFLFGCGVSIASVLLNN-PDKSLVFHVFTDYISD 67 (334)
T ss_pred CceeEEEECcH---hhHHHHHHHHHHHHHhC-CCCCEEEEEEeCCCCH
Confidence 56888777643 34456667777776332 4446899999998887
No 105
>PF02042 RWP-RK: RWP-RK domain; InterPro: IPR003035 This domain is named RWP-RK after a conserved motif at the C terminus of the domain. The domain is found in algal minus dominance proteins as well as plant proteins involved in nitrogen-controlled development [].
Probab=21.02 E-value=74 Score=22.11 Aligned_cols=16 Identities=31% Similarity=0.519 Sum_probs=12.6
Q ss_pred hHHHHHHcCCCcCCCcc
Q 025906 169 WLPFCKRFGIKTICPEA 185 (246)
Q Consensus 169 w~~lc~~~gv~~r~p~~ 185 (246)
++..|+++||. |.|.+
T Consensus 32 LKr~CR~~GI~-RWP~R 47 (52)
T PF02042_consen 32 LKRRCRRLGIP-RWPYR 47 (52)
T ss_pred HHHHHHHcCCC-CCCch
Confidence 56799999985 77754
No 106
>PLN02436 cellulose synthase A
Probab=20.86 E-value=40 Score=36.79 Aligned_cols=25 Identities=12% Similarity=0.220 Sum_probs=19.3
Q ss_pred CCCccceeCCCC----CCCCCCchhhHHH
Q 025906 181 ICPEAYFSDPEN----GDGDSGNAEFIVE 205 (246)
Q Consensus 181 r~p~~Y~~r~~~----~~aKaGnln~a~~ 205 (246)
-.-..|++|+.+ +|+|||++|..+.
T Consensus 531 LP~LVYVSREKRPg~~Hh~KAGAMNaLlR 559 (1094)
T PLN02436 531 LPRLVYVSREKRPGFDHHKKAGAMNSLIR 559 (1094)
T ss_pred CceEEEEecccCCCCCcchhhhhhhhhhh
Confidence 445679999854 6899999987654
No 107
>COG2861 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=20.48 E-value=79 Score=28.91 Aligned_cols=32 Identities=22% Similarity=0.416 Sum_probs=25.0
Q ss_pred CcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHHcCCCcCCCccceeCC
Q 025906 141 KLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICPEAYFSDP 190 (246)
Q Consensus 141 kl~vyvlDDG~~d~t~~~~~ea~~~a~~w~~lc~~~gv~~r~p~~Y~~r~ 190 (246)
+...|++|||++..|... .++++.||. |..|.
T Consensus 149 ~r~l~flDs~T~a~S~a~------------~iAk~~gVp------~~~rd 180 (250)
T COG2861 149 ERGLYFLDSGTIANSLAG------------KIAKEIGVP------VIKRD 180 (250)
T ss_pred HCCeEEEcccccccchhh------------hhHhhcCCc------eeeee
Confidence 457899999998854322 578999999 88887
No 108
>TIGR02584 cas_NE0113 CRISPR-associated protein, NE0113 family. Members of this minor CRISPR-associated (Cas) protein family are found in cas gene clusters in Vibrio vulnificus YJ016, Nitrosomonas europaea ATCC 19718, Mannheimia succiniciproducens MBEL55E, and Verrucomicrobium spinosum.
Probab=20.45 E-value=1.5e+02 Score=26.47 Aligned_cols=70 Identities=19% Similarity=0.310 Sum_probs=41.7
Q ss_pred EEEeccCCCCCChHHHHHHHHHHhcCCCC--CCCcEEEEEcCCCCcccHHHHH---HHHHHhhchHHHHHHcCCCcCCCc
Q 025906 110 VFICTADPTKEPTVEVMNTVLSAMALDYP--PEKLHVYLSDDGGASITLLGMR---EAWKFARSWLPFCKRFGIKTICPE 184 (246)
Q Consensus 110 v~V~tyNp~~E~~~vv~~Tl~~~~~ldYP--~~kl~vyvlDDG~~d~t~~~~~---ea~~~a~~w~~lc~~~gv~~r~p~ 184 (246)
|+|++- |-.|.||-.|+-++.+-..| .+.+.|+=--+|... ..+.+. ++. -..|..||+++.-.++.++
T Consensus 1 ILvat~---G~sPQVVTETLyaL~~~g~~~~pdEi~vItT~~g~~~-~~~~Ll~~~~~~--~g~~~~l~~dy~~~~~~~~ 74 (209)
T TIGR02584 1 ILLCVS---GMSPQIITETIYALAQESPPVVPEEIHVITTSDGKRD-IQQQLLTPDEAW--QGVLAKLRHDYFQGPRPPF 74 (209)
T ss_pred CEEEec---CCCCchHHHHHHHHHhcCCCCCCCeEEEEEccCcHHH-HHHHhccCccch--hhHHHHHHHHHhccCcccc
Confidence 467776 47779999999999988887 564444433444322 122221 111 1346689999943455555
Q ss_pred c
Q 025906 185 A 185 (246)
Q Consensus 185 ~ 185 (246)
.
T Consensus 75 ~ 75 (209)
T TIGR02584 75 D 75 (209)
T ss_pred C
Confidence 4
No 109
>PF03908 Sec20: Sec20; InterPro: IPR005606 Sec20 is a membrane glycoprotein associated with secretory pathway.
Probab=20.32 E-value=99 Score=23.29 Aligned_cols=15 Identities=20% Similarity=0.565 Sum_probs=9.4
Q ss_pred HHHHHHHHHHHHHHH
Q 025906 33 VLLHFTSLAFLVYYR 47 (246)
Q Consensus 33 ~~~~l~~~~~Yl~wR 47 (246)
+++.+++.+.|++||
T Consensus 76 ~~~~f~~~v~yI~~r 90 (92)
T PF03908_consen 76 AFLFFLLVVLYILWR 90 (92)
T ss_pred HHHHHHHHHHHHhhh
Confidence 444444556788886
No 110
>PF00809 Pterin_bind: Pterin binding enzyme This Prosite entry is a subset of the Pfam family; InterPro: IPR000489 The ~250-residue pterin-binding domain has been shown to adopt a (beta/alpha)8 barrel fold, which has the overall shape of a distorted cylinder. It has eight alpha-helices stacked around the outside of an inner cylinder of parallel beta-strands. The pterin ring binds at the bottom of the (beta/alpha;)8 barrel in a polar cup-like region that is relatively solvent exposed and fairly negatively charged. The pterin ring is partially buried within the (beta/alpha)8 barrel. The pterin binding residues are highly conserved and include aspartate and asparagine residues located at the C terminus of the beta-strands of the barrel, which are predicted to form hydrogen bonds with the nitrogen and oxygen atoms of the pterin ring [, , ]. Some proteins known to contain a pterin-binding domain are listed below: Prokaryotic and eukaryotic B12-dependent methionine synthase (MetH) (2.1.1.13 from EC), a large, modular protein that catalyzes the transfer of a methyl group from methyltetrahydrofolate (CH3-H4folate) to Hcy to form methionine, using cobalamin as an intermediate methyl carrier. Prokaryotic and eukaryotic dihydropteroate synthase (DHPS) (2.5.1.15 from EC). It catalyzes the condensation of para-aminobenzoic acid (pABA) with 7,8- dihydropterin-pyrophosphate (DHPPP), eliminating pyrophosphate to form 7,8- dihydropteroate which is subsequently converted to tetrahydrofolate. Moorella thermoacetica 5-methyltetrahydrofolate corrinoid/iron sulphur protein methyltransferase (MeTr). It transfers the N5-methyl group from CH3-H4folate to a cob(I)amide centre in another protein, the corrinoid iron sulphur protein. ; GO: 0042558 pteridine-containing compound metabolic process; PDB: 2VP8_B 2BMB_A 2Y5S_B 2Y5J_A 3BOF_B 1Q7Q_B 1Q85_B 1Q7Z_A 1Q7M_A 1Q8A_B ....
Probab=20.27 E-value=5.6e+02 Score=22.04 Aligned_cols=89 Identities=18% Similarity=0.200 Sum_probs=53.8
Q ss_pred CceeEEEeccCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCC-CcccHHHHHHHHHHhhchHHHHHHcCCCcCCCc
Q 025906 106 PGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGG-ASITLLGMREAWKFARSWLPFCKRFGIKTICPE 184 (246)
Q Consensus 106 P~Vdv~V~tyNp~~E~~~vv~~Tl~~~~~ldYP~~kl~vyvlDDG~-~d~t~~~~~ea~~~a~~w~~lc~~~gv~~r~p~ 184 (246)
+.+=|-|-|+| +++++..+.. . . .+ +.|.++ .+ .+ + -.++|+++|+.
T Consensus 71 ~~~plSIDT~~-----~~v~~~aL~~--g----~---~~-ind~~~~~~--~~---~-------~~~l~a~~~~~----- 118 (210)
T PF00809_consen 71 PDVPLSIDTFN-----PEVAEAALKA--G----A---DI-INDISGFED--DP---E-------MLPLAAEYGAP----- 118 (210)
T ss_dssp TTSEEEEEESS-----HHHHHHHHHH--T----S---SE-EEETTTTSS--ST---T-------HHHHHHHHTSE-----
T ss_pred CCeEEEEECCC-----HHHHHHHHHc--C----c---ce-EEecccccc--cc---h-------hhhhhhcCCCE-----
Confidence 34667788997 6888887765 1 1 23 444444 31 11 2 23899999998
Q ss_pred cceeCCCCCCCCCCchhhHHHH-HHHHHHHHHHHHHHHHhhccCC
Q 025906 185 AYFSDPENGDGDSGNAEFIVER-EKIKEKYTEFKERVTRAIEKWG 228 (246)
Q Consensus 185 ~Y~~r~~~~~aKaGnln~a~~~-~~~~~~y~~f~~ri~~~~~~~~ 228 (246)
|+--..... ..|-...+..+ +-....++.|..+++.+.+-|.
T Consensus 119 -vV~m~~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~i~~l~~~Gi 161 (210)
T PF00809_consen 119 -VVLMHSDGN-PKGMPETADYRLDIAEEIIEFLEERIEALEKAGI 161 (210)
T ss_dssp -EEEESESSE-TTTTTSSHHHSHSHHHHHHHHHHHHHHHHHHTT-
T ss_pred -EEEEecccc-cccccccchhhhhHHHHHHHHHHHHHHHHHHcCC
Confidence 887664411 11222234444 6677788889998887765554
No 111
>cd08318 Death_NMPP84 Death domain of Nuclear Matrix Protein P84. Death domain (DD) found in the Nuclear Matrix Protein P84 (also known as HPR1 or THOC1). HPR1/p84 resides in the nuclear matrix and is part of the THO complex, also called TREX (transcription/export) complex, which functions in mRNP biogenesis at the interface between transcription and export of mRNA from the nucleus. Mice lacking THOC1 have abnormal testis development and are sterile. In general, DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including CARD (Caspase activation and recruitment domain), DED (Death Effector Domain), and PYRIN. They serve as adaptors in signaling pathways and can recruit other proteins into signaling complexes.
Probab=20.08 E-value=1.6e+02 Score=22.00 Aligned_cols=30 Identities=13% Similarity=0.218 Sum_probs=21.3
Q ss_pred CCCcccHHHHHHHH-HHhhchHHHHHHcCCC
Q 025906 150 GGASITLLGMREAW-KFARSWLPFCKRFGIK 179 (246)
Q Consensus 150 G~~d~t~~~~~ea~-~~a~~w~~lc~~~gv~ 179 (246)
++++.|-+.+...+ ..-+.|..|++++|+.
T Consensus 1 ~~~~~t~~~l~~ia~~iG~~Wk~Lar~LGls 31 (86)
T cd08318 1 QSKPVTGEQITVFANKLGEDWKTLAPHLEMK 31 (86)
T ss_pred CCCCCCHHHHHHHHHHHhhhHHHHHHHcCCC
Confidence 35667777665443 3346799999999987
Done!