Query 025906
Match_columns 246
No_of_seqs 191 out of 974
Neff 5.8
Searched_HMMs 29240
Date Mon Mar 25 20:18:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025906.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025906hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4hg6_A Cellulose synthase subu 99.9 7.4E-23 2.5E-27 206.7 14.9 185 28-224 64-263 (802)
2 1qg8_A Protein (spore coat pol 98.8 2.5E-09 8.7E-14 90.8 2.9 78 106-206 1-86 (255)
3 1xhb_A Polypeptide N-acetylgal 98.7 1.2E-08 4.2E-13 95.6 7.3 85 102-206 25-112 (472)
4 3bcv_A Putative glycosyltransf 98.7 1.4E-08 4.7E-13 85.3 6.4 78 105-206 4-82 (240)
5 2z86_A Chondroitin synthase; G 98.7 8.2E-09 2.8E-13 99.9 4.9 99 104-223 91-198 (625)
6 2d7i_A Polypeptide N-acetylgal 98.5 6.7E-08 2.3E-12 93.7 5.1 84 103-206 109-194 (570)
7 3ckj_A Putative uncharacterize 98.5 8.7E-08 3E-12 86.3 5.0 100 104-223 46-156 (329)
8 2ffu_A Ppgalnact-2, polypeptid 98.4 7.3E-08 2.5E-12 91.3 2.9 83 102-206 62-144 (501)
9 3l7i_A Teichoic acid biosynthe 98.3 5.7E-08 2E-12 96.4 0.0 96 106-224 2-108 (729)
10 2z86_A Chondroitin synthase; G 98.2 1.2E-06 4E-11 84.7 5.8 79 104-206 373-452 (625)
11 3f1y_A Mannosyl-3-phosphoglyce 98.1 4.7E-07 1.6E-11 84.4 1.6 98 105-222 93-203 (387)
12 4fix_A UDP-galactofuranosyl tr 97.5 2.3E-05 7.9E-10 77.7 1.7 47 104-154 178-225 (657)
13 2bo4_A Mannosylglycerate synth 97.2 0.00047 1.6E-08 64.6 6.1 56 110-179 4-60 (397)
14 2wvl_A Mannosyl-3-phosphoglyce 96.6 0.0029 1E-07 59.1 6.5 47 105-160 52-98 (391)
15 2fy7_A Beta-1,4-galactosyltran 96.5 0.0017 5.7E-08 58.0 3.7 43 105-153 64-109 (287)
16 2zu9_A Mannosyl-3-phosphoglyce 96.3 0.0069 2.3E-07 56.9 6.9 41 106-155 51-91 (394)
17 1fo8_A Alpha-1,3-mannosyl-glyc 95.9 0.006 2.1E-07 56.1 4.3 44 105-153 1-44 (343)
18 2nxv_A ATP synthase subunits r 95.7 0.013 4.6E-07 50.1 5.7 44 104-153 14-58 (249)
19 2l9u_A Receptor tyrosine-prote 34.3 34 0.0011 21.3 2.7 11 39-49 23-33 (40)
20 3vup_A Beta-1,4-mannanase; TIM 29.3 1.8E+02 0.006 23.7 7.5 52 122-179 41-105 (351)
21 3rfr_C PMOC; membrane, oxidore 25.5 1.4E+02 0.0049 26.0 6.2 62 32-93 24-91 (256)
22 4awe_A Endo-beta-D-1,4-mannana 22.5 3.2E+02 0.011 22.3 7.9 28 122-151 36-63 (387)
23 2yl6_A Beta-N-acetylhexosamini 20.8 1.3E+02 0.0044 27.8 5.4 29 120-150 19-47 (434)
24 2r41_A Uncharacterized protein 20.2 50 0.0017 25.4 2.1 11 143-153 89-99 (110)
No 1
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=99.89 E-value=7.4e-23 Score=206.66 Aligned_cols=185 Identities=23% Similarity=0.309 Sum_probs=151.7
Q ss_pred HHHHHHHHHHHH-HHHHHHHHhhhcccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCcCCCCC
Q 025906 28 INRSLVLLHFTS-LAFLVYYRVSYFFQVSNARAAPLLPWLLVFAAELLLSFQWLLGIAYRWRPISRTVFPERLPEADQLP 106 (246)
Q Consensus 28 ~~R~~~~~~l~~-~~~Yl~wR~~~tl~~~~~~~~~~~~wi~l~~aE~~~~~~~lL~~~~~~~p~~r~~~~~~l~~~~~~P 106 (246)
+.|++.+++.++ .++|++||++.|++.. ..+.+.+++++++++|+++.+.+++..+..+++..|.+.++. .+++.|
T Consensus 64 ~~~~~~~~~~~~~~~~y~~wr~~~tl~~~-~~~~~~~~~~~ll~~~~~~~~~~l~~~~~~~~~~~r~~~~~~--~~~~~P 140 (802)
T 4hg6_A 64 VPRFLLLSAASMLVMRYWFWRLFETLPPP-ALDASFLFALLLFAVETFSISIFFLNGFLSADPTDRPFPRPL--QPEELP 140 (802)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTSCCC-SSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCCCCCC--CTTTCC
T ss_pred chHHHHHHHHHHHHHHHHHHHhheecCCc-cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCC--CccCCC
Confidence 445555544444 5789999999999763 235778899999999999999999999999998888765432 246789
Q ss_pred ceeEEEeccCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHH-----HHHHHHHHhhchHHHHHHcCCCcC
Q 025906 107 GIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLL-----GMREAWKFARSWLPFCKRFGIKTI 181 (246)
Q Consensus 107 ~Vdv~V~tyNp~~E~~~vv~~Tl~~~~~ldYP~~kl~vyvlDDG~~d~t~~-----~~~ea~~~a~~w~~lc~~~gv~~r 181 (246)
+|+|+||||| |+++++++|+.++++++||.++++|+|+||||+|.|.+ .+.+.++.......+|+++++.
T Consensus 141 ~VSViIPtyN---e~~~lL~~~L~Sl~~q~yp~~~~eIiVVDDgStD~T~~~~d~~i~~~~~~~~~~l~~~~~~~~v~-- 215 (802)
T 4hg6_A 141 TVDILVPSYN---EPADMLSVTLAAAKNMIYPARLRTVVLCDDGGTDQRCMSPDPELAQKAQERRRELQQLCRELGVV-- 215 (802)
T ss_dssp CEEEEEECTT---CCHHHHHHHHHHHHTSSCCTTCCEEEEESTTCHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHTCE--
T ss_pred cEEEEEEECC---CCHHHHHHHHHHHHhccCCCCcEEEEEEECCCCccccccCCHHHHHHHHhhhHHHHHHHHhcCcE--
Confidence 9999999999 99889999999999999999899999999999999953 3444444445566899999999
Q ss_pred CCccceeCCCCCCCCCCchhhHHHH---------HHHHHHHHHHHHHHHHhh
Q 025906 182 CPEAYFSDPENGDGDSGNAEFIVER---------EKIKEKYTEFKERVTRAI 224 (246)
Q Consensus 182 ~p~~Y~~r~~~~~aKaGnln~a~~~---------~~~~~~y~~f~~ri~~~~ 224 (246)
|+.+++|.+.|+||+|.+++. |+|-....+++.+..+.+
T Consensus 216 ----~i~~~~~~~GKa~alN~gl~~a~gd~Il~lDaD~~~~pd~L~~lv~~~ 263 (802)
T 4hg6_A 216 ----YSTRERNEHAKAGNMSAALERLKGELVVVFDADHVPSRDFLARTVGYF 263 (802)
T ss_dssp ----EEECSSCCSHHHHHHHHHHHHCCCSEEEECCTTEEECTTHHHHHHHHH
T ss_pred ----EEEecCCCCcchHHHHHHHHhcCCCEEEEECCCCCcChHHHHHHHHHH
Confidence 999999989999999999976 666666777777777665
No 2
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=98.76 E-value=2.5e-09 Score=90.80 Aligned_cols=78 Identities=15% Similarity=0.314 Sum_probs=60.9
Q ss_pred CceeEEEeccCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHHcCCCcCCCcc
Q 025906 106 PGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICPEA 185 (246)
Q Consensus 106 P~Vdv~V~tyNp~~E~~~vv~~Tl~~~~~ldYP~~kl~vyvlDDG~~d~t~~~~~ea~~~a~~w~~lc~~~gv~~r~p~~ 185 (246)
|.|+|+||+|| ++ +.+.++|.++++.+|| .++|+|+||||+|.|.+.+.+ +++..+|.
T Consensus 1 p~vSViIp~yn---~~-~~l~~~l~Sl~~q~~~--~~eiivvDd~S~d~t~~~~~~----------~~~~~~i~------ 58 (255)
T 1qg8_A 1 PKVSVIMTSYN---KS-DYVAKSISSILSQTFS--DFELFIMDDNSNEETLNVIRP----------FLNDNRVR------ 58 (255)
T ss_dssp CCEEEEEEESS---CT-TTHHHHHHHHHTCSCC--CEEEEEEECSCCHHHHHHHGG----------GGGSTTEE------
T ss_pred CeEEEEEEcCC---CH-HHHHHHHHHHHhccCC--ceEEEEEECCCCchHHHHHHH----------HhhcCCEE------
Confidence 78999999999 76 7999999999999999 799999999999966554332 22334556
Q ss_pred ceeCC--------CCCCCCCCchhhHHHH
Q 025906 186 YFSDP--------ENGDGDSGNAEFIVER 206 (246)
Q Consensus 186 Y~~r~--------~~~~aKaGnln~a~~~ 206 (246)
|+..+ .|.+ ++++.|.+++.
T Consensus 59 ~i~~~~~~~~~~~~n~G-~~~a~N~gi~~ 86 (255)
T 1qg8_A 59 FYQSDISGVKERTEKTR-YAALINQAIEM 86 (255)
T ss_dssp EEECCCCSHHHHHSSCH-HHHHHHHHHHH
T ss_pred EEecccccccccccccC-HHHHHHHHHHH
Confidence 88887 4533 56778888765
No 3
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=98.74 E-value=1.2e-08 Score=95.56 Aligned_cols=85 Identities=15% Similarity=0.096 Sum_probs=68.1
Q ss_pred CCCCCceeEEEeccCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcc-cHHHHHHHHHHhhchHHHHHHcC--C
Q 025906 102 ADQLPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASI-TLLGMREAWKFARSWLPFCKRFG--I 178 (246)
Q Consensus 102 ~~~~P~Vdv~V~tyNp~~E~~~vv~~Tl~~~~~ldYP~~kl~vyvlDDG~~d~-t~~~~~ea~~~a~~w~~lc~~~g--v 178 (246)
++.+|.|+|+||+|| |+.+.+.+||.++++.+||...++|+|+||||+|. |.+.+.+ ++++++ |
T Consensus 25 ~~~~p~vSVIIp~yN---~~~~~l~~~l~Sl~~q~~~~~~~EIIvVDd~S~d~~t~~~l~~----------~~~~~~~~v 91 (472)
T 1xhb_A 25 PDNLPTTSVVIVFHN---EAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLES----------YVKKLKVPV 91 (472)
T ss_dssp CSCCCCEEEEEEESS---CCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHHHH----------HHHSSSSCE
T ss_pred CcCCCCeEEEEEeCC---CCHHHHHHHHHHHHhcCcHhHceEEEEEECCCCcHHHHHHHHH----------HHHHCCCcE
Confidence 356899999999999 87789999999999999996557999999999984 6665554 445554 6
Q ss_pred CcCCCccceeCCCCCCCCCCchhhHHHH
Q 025906 179 KTICPEAYFSDPENGDGDSGNAEFIVER 206 (246)
Q Consensus 179 ~~r~p~~Y~~r~~~~~aKaGnln~a~~~ 206 (246)
. ++..+.|.+ +++..|.+++.
T Consensus 92 ~------vi~~~~n~G-~~~a~N~g~~~ 112 (472)
T 1xhb_A 92 H------VIRMEQRSG-LIRARLKGAAV 112 (472)
T ss_dssp E------EEECSSCCC-HHHHHHHHHHH
T ss_pred E------EEECCCCCC-hHHHHHHHHHh
Confidence 6 998887755 66778888765
No 4
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=98.73 E-value=1.4e-08 Score=85.31 Aligned_cols=78 Identities=14% Similarity=0.182 Sum_probs=61.4
Q ss_pred CCceeEEEeccCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHHc-CCCcCCC
Q 025906 105 LPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRF-GIKTICP 183 (246)
Q Consensus 105 ~P~Vdv~V~tyNp~~E~~~vv~~Tl~~~~~ldYP~~kl~vyvlDDG~~d~t~~~~~ea~~~a~~w~~lc~~~-gv~~r~p 183 (246)
.|.|+|+||+|| ++ +.+.++|.++++.+|| .++|+|+||||+|.|.+.+.+ ++++. +|.
T Consensus 4 ~p~vsViIp~yn---~~-~~l~~~l~Sl~~q~~~--~~eiIvvDd~S~d~t~~~~~~----------~~~~~~~i~---- 63 (240)
T 3bcv_A 4 IPKVSVIVPIYN---VE-KYLDQCVQALLAQTLS--DIEIILIDDESPDNCPKICDD----------YAAQYPNIK---- 63 (240)
T ss_dssp CCSEEEEEEESS---CT-TTHHHHHHHHHTCSSS--SEEEEEEECCCSSSHHHHHHH----------HHHHCSSEE----
T ss_pred CCcEEEEEecCC---CH-HHHHHHHHHHHhCcCC--CeEEEEEECCCCcCHHHHHHH----------HHhhCCCEE----
Confidence 588999999999 66 7999999999999998 799999999999988766554 33443 344
Q ss_pred ccceeCCCCCCCCCCchhhHHHH
Q 025906 184 EAYFSDPENGDGDSGNAEFIVER 206 (246)
Q Consensus 184 ~~Y~~r~~~~~aKaGnln~a~~~ 206 (246)
++.. .| ..++++.|.+++.
T Consensus 64 --~i~~-~n-~G~~~a~N~g~~~ 82 (240)
T 3bcv_A 64 --VIHK-KN-AGLGMACNSGLDV 82 (240)
T ss_dssp --EEEC-CC-CCHHHHHHHHHHH
T ss_pred --EEEC-CC-CChHHHHHHHHHH
Confidence 7763 45 3366778888765
No 5
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=98.70 E-value=8.2e-09 Score=99.88 Aligned_cols=99 Identities=15% Similarity=0.106 Sum_probs=75.6
Q ss_pred CCCceeEEEeccCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHHcCCCcCCC
Q 025906 104 QLPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICP 183 (246)
Q Consensus 104 ~~P~Vdv~V~tyNp~~E~~~vv~~Tl~~~~~ldYP~~kl~vyvlDDG~~d~t~~~~~ea~~~a~~w~~lc~~~gv~~r~p 183 (246)
..|.|+|+||+|| |+ +.+.+||.++...+||. ..+|+|+|||++|.|.+.+.+ ++++.++.
T Consensus 91 ~~p~vsviIp~~n---~~-~~l~~~l~sl~~q~~~~-~~eiivvDd~s~d~t~~~~~~----------~~~~~~i~---- 151 (625)
T 2z86_A 91 IIDGLSIVIPTYN---RA-KILAITLACLCNQKTIY-DYEVIVADDGSKENIEEIVRE----------FESLLNIK---- 151 (625)
T ss_dssp CCCCEEEEEEESS---CH-HHHHHHHHHHHTCCCSS-CEEEEEEEESCSSCHHHHHHT----------TTTTSCEE----
T ss_pred cCCcEEEEEecCC---cH-HHHHHHHHHHHhhccCC-CeEEEEEeCCCchhHHHHHHH----------hhhcCCeE----
Confidence 3589999999999 76 89999999999999886 899999999999966544332 34455666
Q ss_pred ccceeCCCCCCCCCCchhhHHHH---------HHHHHHHHHHHHHHHHh
Q 025906 184 EAYFSDPENGDGDSGNAEFIVER---------EKIKEKYTEFKERVTRA 223 (246)
Q Consensus 184 ~~Y~~r~~~~~aKaGnln~a~~~---------~~~~~~y~~f~~ri~~~ 223 (246)
|+.++++.+.++++.|.+++. |+|-....+++.++.+.
T Consensus 152 --~i~~~~~~~g~~~a~N~g~~~a~g~~v~~lD~D~~~~~~~l~~~~~~ 198 (625)
T 2z86_A 152 --YVRQKDYGYQLCAVRNLGLRAAKYNYVAILDCDMAPNPLWVQSYMEL 198 (625)
T ss_dssp --EEEECCCSCCHHHHHHHHHHHCCSSEEEEECTTEEECTTHHHHHHHH
T ss_pred --EEEeCCCCcchhHHHHHHHHhCCcCEEEEECCCCCCCHHHHHHHHHH
Confidence 999887666788999999875 44444445555555544
No 6
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=98.51 E-value=6.7e-08 Score=93.73 Aligned_cols=84 Identities=14% Similarity=0.146 Sum_probs=65.6
Q ss_pred CCCCceeEEEeccCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCccc-HHHHHHHHHHhhchHHHHHHc-CCCc
Q 025906 103 DQLPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASIT-LLGMREAWKFARSWLPFCKRF-GIKT 180 (246)
Q Consensus 103 ~~~P~Vdv~V~tyNp~~E~~~vv~~Tl~~~~~ldYP~~kl~vyvlDDG~~d~t-~~~~~ea~~~a~~w~~lc~~~-gv~~ 180 (246)
+..|.|+|+||+|| |+.+.+.+||.++++..||...++|+|+||||+|.| .+.+.+ +++++ +|.
T Consensus 109 ~~~P~vSVIIp~yN---e~~~~L~~~L~Sll~qt~~~~~~EIIVVDDgS~D~tl~~~l~~----------~~~~~~~v~- 174 (570)
T 2d7i_A 109 ETLPNTSIIIPFHN---EGWSSLLRTVHSVLNRSPPELVAEIVLVDDFSDREHLKKPLED----------YMALFPSVR- 174 (570)
T ss_dssp SSCCCEEEEEEESS---CCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCCCGGGTHHHHH----------HHTTSTTEE-
T ss_pred CCCCCeEEEEEECC---CCHHHHHHHHHHHHhcCCccCcEEEEEEECCCCcHHHHHHHHH----------HHHhCCeEE-
Confidence 56899999999999 877899999999999999954459999999999988 454443 44443 455
Q ss_pred CCCccceeCCCCCCCCCCchhhHHHH
Q 025906 181 ICPEAYFSDPENGDGDSGNAEFIVER 206 (246)
Q Consensus 181 r~p~~Y~~r~~~~~aKaGnln~a~~~ 206 (246)
++..+.|.+ ++++.|.+++.
T Consensus 175 -----vi~~~~n~G-~~~A~N~G~~~ 194 (570)
T 2d7i_A 175 -----ILRTKKREG-LIRTRMLGASV 194 (570)
T ss_dssp -----EEECSSCCC-HHHHHHHHHHH
T ss_pred -----EEECCCCCC-HHHHHHHHHHh
Confidence 888776644 66778887764
No 7
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=98.49 E-value=8.7e-08 Score=86.27 Aligned_cols=100 Identities=14% Similarity=0.032 Sum_probs=69.1
Q ss_pred CCCceeEEEeccCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHHcCCCcCCC
Q 025906 104 QLPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICP 183 (246)
Q Consensus 104 ~~P~Vdv~V~tyNp~~E~~~vv~~Tl~~~~~ldYP~~kl~vyvlDDG~~d~t~~~~~ea~~~a~~w~~lc~~~gv~~r~p 183 (246)
.-|.|+|+||+|| |+ +.+.++|.++++..||. ..+|+|+||||+|.|.+. +++++...-..
T Consensus 46 ~~~~vSViIp~yN---~~-~~l~~~l~sl~~q~~~~-~~eiivVDdgS~D~t~~~--------------~~~~~~~~~~~ 106 (329)
T 3ckj_A 46 AGRTISVVLPALD---EE-DTIGSVIDSISPLVDGL-VDELIVLDSGSTDDTEIR--------------AVAAGARVVSR 106 (329)
T ss_dssp TTCCEEEEEEESS---CT-TTHHHHHHHHGGGBTTT-BSEEEEEECSCCSSHHHH--------------HHHTTCEEEEH
T ss_pred cCCcEEEEEeeCC---CH-HHHHHHHHHHHHhhCCC-CcEEEEEeCCCCchHHHH--------------HHHhhhhhccc
Confidence 4589999999999 77 68999999999999993 589999999999966444 34445440011
Q ss_pred cccee-CCCCCCCCCCchhhHHHH---------HHHHH-HHHHHHHHHHHh
Q 025906 184 EAYFS-DPENGDGDSGNAEFIVER---------EKIKE-KYTEFKERVTRA 223 (246)
Q Consensus 184 ~~Y~~-r~~~~~aKaGnln~a~~~---------~~~~~-~y~~f~~ri~~~ 223 (246)
..++. .+.| ..|++++|.+++. |+|-. ...+++.++.+.
T Consensus 107 ~~~~~~~~~n-~G~~~a~n~g~~~a~gd~i~~lD~D~~~~~p~~l~~l~~~ 156 (329)
T 3ckj_A 107 EQALPEVPIR-PGKGEALWRSLAASRGDIVVFVDSDLINPHPMFVPWLVGP 156 (329)
T ss_dssp HHHCTTSCCC-CSHHHHHHHHHHHCCCSEEEECCTTEESCCTTHHHHHHHH
T ss_pred eeeeccCCCC-CCHHHHHHHHHHhCCCCEEEEECCCCCCcChHHHHHHHHH
Confidence 11232 3445 3477888888865 55554 445666665554
No 8
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=98.42 E-value=7.3e-08 Score=91.28 Aligned_cols=83 Identities=16% Similarity=0.101 Sum_probs=63.4
Q ss_pred CCCCCceeEEEeccCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHHcCCCcC
Q 025906 102 ADQLPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTI 181 (246)
Q Consensus 102 ~~~~P~Vdv~V~tyNp~~E~~~vv~~Tl~~~~~ldYP~~kl~vyvlDDG~~d~t~~~~~ea~~~a~~w~~lc~~~gv~~r 181 (246)
+...|.|+|+||+|| |+...+.++|.++++..||...++|+|+||||+|.|.... +++.-+|.
T Consensus 62 ~~~~p~vSVIIp~yN---~~~~~L~~~l~Sl~~q~~~~~~~EIIvVDDgS~D~t~~~~------------~~~~~~v~-- 124 (501)
T 2ffu_A 62 RVDLPATSVVITFHN---EARSALLRTVVSVLKKSPPHLIKEIILVDDYSNDPEDGAL------------LGKIEKVR-- 124 (501)
T ss_dssp CSSCCCEEEEEEESS---CCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCSCTHHHHG------------GGGBTTEE--
T ss_pred CcCCCCEEEEEEeCc---CcHHHHHHHHHHHHhhCchhhceeEEEEECCCCchHHHHH------------HhcCCCEE--
Confidence 356899999999999 8845999999999999998545699999999999764321 11223455
Q ss_pred CCccceeCCCCCCCCCCchhhHHHH
Q 025906 182 CPEAYFSDPENGDGDSGNAEFIVER 206 (246)
Q Consensus 182 ~p~~Y~~r~~~~~aKaGnln~a~~~ 206 (246)
|+..+.|.| ++++.|.+++.
T Consensus 125 ----vi~~~~n~G-~~~A~N~G~~~ 144 (501)
T 2ffu_A 125 ----VLRNDRREG-LMRSRVRGADA 144 (501)
T ss_dssp ----EEECSSCCH-HHHHHHHHHHH
T ss_pred ----EEECCCCcC-HHHHHHHHHHh
Confidence 888777755 56778877764
No 9
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=98.34 E-value=5.7e-08 Score=96.43 Aligned_cols=96 Identities=11% Similarity=0.118 Sum_probs=0.0
Q ss_pred CceeEEEeccCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHHc--CCCcCCC
Q 025906 106 PGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRF--GIKTICP 183 (246)
Q Consensus 106 P~Vdv~V~tyNp~~E~~~vv~~Tl~~~~~ldYP~~kl~vyvlDDG~~d~t~~~~~ea~~~a~~w~~lc~~~--gv~~r~p 183 (246)
|.|+|+||||| ++ +.+.++|.++++.+|| .++|+|+||||+|.|.+.+.+ +++++ +|.
T Consensus 2 p~vSVIIp~yN---~~-~~L~~~L~Sll~Qt~~--~~EIIVVDDgStD~t~~il~~----------~~~~~~~~i~---- 61 (729)
T 3l7i_A 2 NKLTIIVTYYN---AE-EYITGCLESIKQQRTQ--DFNLIIVNDGSTDQSKKLMDE----------AIKDYDKNIR---- 61 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ceEEEEEEcCC---CH-HHHHHHHHHHHhCCCC--CeEEEEEECCCCCcHHHHHHH----------HHHhCCCCEE----
Confidence 78999999999 66 7999999999999999 889999999999988776654 33443 466
Q ss_pred ccceeCCCCCCCCCCchhhHHHH---------HHHHHHHHHHHHHHHHhh
Q 025906 184 EAYFSDPENGDGDSGNAEFIVER---------EKIKEKYTEFKERVTRAI 224 (246)
Q Consensus 184 ~~Y~~r~~~~~aKaGnln~a~~~---------~~~~~~y~~f~~ri~~~~ 224 (246)
|+..+.|.| .+++.|.+++. |+|-....+++.++.+..
T Consensus 62 --~i~~~~n~G-~~~arN~gi~~A~gdyI~flD~Dd~~~p~~l~~l~~~l 108 (729)
T 3l7i_A 62 --FIDLDENSG-HAHARNIALEEVETPYFMFLDADDELASYAITFYLEKF 108 (729)
T ss_dssp --------------------------------------------------
T ss_pred --EEECCCCCC-HHHHHHHHHHhccCCEEEEECCCCCCChhHHHHHHHHh
Confidence 888776755 56778877654 555555566666655443
No 10
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=98.20 E-value=1.2e-06 Score=84.73 Aligned_cols=79 Identities=22% Similarity=0.324 Sum_probs=61.6
Q ss_pred CCCceeEEEeccCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHHc-CCCcCC
Q 025906 104 QLPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRF-GIKTIC 182 (246)
Q Consensus 104 ~~P~Vdv~V~tyNp~~E~~~vv~~Tl~~~~~ldYP~~kl~vyvlDDG~~d~t~~~~~ea~~~a~~w~~lc~~~-gv~~r~ 182 (246)
..|.|+|+||||| ++ +.+.++|.++++.+|| .++|+|+||||+|.|.+.+.+ ++++. +|.
T Consensus 373 ~~~~vsiii~~yn---~~-~~l~~~l~s~~~q~~~--~~eiivvdd~S~d~t~~~~~~----------~~~~~~~i~--- 433 (625)
T 2z86_A 373 RVPLVSIYIPAYN---CS-KYIVRCVESALNQTIT--DLEVCICDDGSTDDTLRILQE----------HYANHPRVR--- 433 (625)
T ss_dssp SSCSEEEEEEESS---CT-TTHHHHHHHHHSSSCC--SEEEEEEEESCSSSHHHHHHH----------HHTTCTTEE---
T ss_pred cCCeEEEEEeCCC---CH-HHHHHHHHHHHhCcCC--CeEEEEEECcCChhHHHHHHH----------HHhhCCcEE---
Confidence 3689999999999 66 7899999999999998 799999999999988776554 22332 344
Q ss_pred CccceeCCCCCCCCCCchhhHHHH
Q 025906 183 PEAYFSDPENGDGDSGNAEFIVER 206 (246)
Q Consensus 183 p~~Y~~r~~~~~aKaGnln~a~~~ 206 (246)
++. ..| ..++++.|.+++.
T Consensus 434 ---~~~-~~n-~G~~~a~n~g~~~ 452 (625)
T 2z86_A 434 ---FIS-QKN-KGIGSASNTAVRL 452 (625)
T ss_dssp ---EEE-ECC-CCHHHHHHHHHHH
T ss_pred ---EEe-CCC-CCHHHHHHHHHHh
Confidence 775 444 3466788888865
No 11
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=98.15 E-value=4.7e-07 Score=84.44 Aligned_cols=98 Identities=10% Similarity=-0.051 Sum_probs=64.0
Q ss_pred CCceeEEEeccCCCCCChHHHHHHHHHHhcC--CCCCCCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHHcCCCc-C
Q 025906 105 LPGIDVFICTADPTKEPTVEVMNTVLSAMAL--DYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKT-I 181 (246)
Q Consensus 105 ~P~Vdv~V~tyNp~~E~~~vv~~Tl~~~~~l--dYP~~kl~vyvlDDG~~d~t~~~~~ea~~~a~~w~~lc~~~gv~~-r 181 (246)
.|.|+|+||||| |. +.|.++|.++.++ +||. ..+|+|+||||+|.|.+. +++++... .
T Consensus 93 ~p~vSVVIP~yN---e~-~~l~~~l~sl~~~l~~~~~-~~EIIVVDDgStD~T~~i--------------~~~~~~~v~~ 153 (387)
T 3f1y_A 93 GLTVSAVLPSRN---VA-DTVGGIIDEIHALNERAPL-IDQILVVDADSEDGTAGV--------------AASHGAEVYS 153 (387)
T ss_dssp TCCEEEEEEESS---CT-TTHHHHHHHHHHHHHHSCC-CSEEEEEECSCSSSHHHH--------------HHHTTCEEEE
T ss_pred CCeEEEEEEcCC---CH-HHHHHHHHHHHHHHhcCCC-CeEEEEEcCcCCccHHHH--------------HHHhCchhcc
Confidence 589999999999 77 7899999999873 6765 579999999999976544 34444441 1
Q ss_pred CCccceeCCCCCCCCCCchhhHHHH---------HHHHH-HHHHHHHHHHH
Q 025906 182 CPEAYFSDPENGDGDSGNAEFIVER---------EKIKE-KYTEFKERVTR 222 (246)
Q Consensus 182 ~p~~Y~~r~~~~~aKaGnln~a~~~---------~~~~~-~y~~f~~ri~~ 222 (246)
....++..+.|. .|++++|.+++. |+|-. .-.+++.++.+
T Consensus 154 ~~~~~i~~~~n~-G~g~A~n~G~~~A~gd~i~~lDaD~~~~~p~~L~~l~~ 203 (387)
T 3f1y_A 154 ENELMSGYGDAH-GKGDAMWRALSVTRGDLVLYIDADTRDFRPQLAYGVLG 203 (387)
T ss_dssp GGGTTGGGCSCC-SHHHHHHHHTTTCCSSEEEECCTTCSSCCTHHHHTTHH
T ss_pred cceeEecCCccC-CHHHHHHHHHHhcCCCEEEEEcCCCCcCCHHHHHHHHH
Confidence 112234444453 356677777653 55544 33444444443
No 12
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=97.52 E-value=2.3e-05 Score=77.72 Aligned_cols=47 Identities=21% Similarity=0.246 Sum_probs=40.5
Q ss_pred CCCceeEEEeccCCCCCChHHHHHHHHHHhcCCCCCCCc-EEEEEcCCCCcc
Q 025906 104 QLPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKL-HVYLSDDGGASI 154 (246)
Q Consensus 104 ~~P~Vdv~V~tyNp~~E~~~vv~~Tl~~~~~ldYP~~kl-~vyvlDDG~~d~ 154 (246)
.-|.|+|+||||| ++ +.+.++|.++.+..|+.+.. +|+|+||||+|.
T Consensus 178 ~~pkVSVVIptYN---~~-~~L~~~L~SL~~qt~~~~~~~EIIVVDNgStD~ 225 (657)
T 4fix_A 178 GTANIAVGIPTFN---RP-ADCVNALRELTADPLVDQVIGAVIVPDQGERKV 225 (657)
T ss_dssp SCCCEEEECCBSS---CH-HHHHHHHHHHTTSHHHHTTEEEEEEEECSSSCG
T ss_pred CCCeEEEEEEecC---CH-HHHHHHHHHHHcCccccCCCCEEEEEECcCCCc
Confidence 3589999999999 66 79999999999998855444 999999999974
No 13
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*
Probab=97.16 E-value=0.00047 Score=64.57 Aligned_cols=56 Identities=16% Similarity=0.059 Sum_probs=34.2
Q ss_pred EEEeccCCCCCChHHHHHHHHHHh-cCCCCCCCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHHcCCC
Q 025906 110 VFICTADPTKEPTVEVMNTVLSAM-ALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIK 179 (246)
Q Consensus 110 v~V~tyNp~~E~~~vv~~Tl~~~~-~ldYP~~kl~vyvlDDG~~d~t~~~~~ea~~~a~~w~~lc~~~gv~ 179 (246)
|+||++| |.. ..++..+. ...+| ..+|+|+||||+|.|.+.+++.++ ..+.+.|+.
T Consensus 4 VIiP~~e---E~I---~~vl~~l~~~~~~~--~~EIIVVDDGStD~T~eia~~la~------~~~~~~g~~ 60 (397)
T 2bo4_A 4 VVFPFKH---EHP---EVLLHNVRVAAAHP--RVHEVLCIGYERDQTYEAVERAAP------EISRATGTP 60 (397)
T ss_dssp EEEECCS---SCH---HHHHHHHHHHHHST--TCCEEEEEESSCCHHHHHHHHHHH------HHHHHHSCC
T ss_pred EEEeCCc---cCH---HHHHHHHHHhccCC--CeEEEEEECcCCccHHHHHHHhhh------hcccccCCe
Confidence 4455544 543 44444432 12345 568999999999999998876541 233256776
No 14
>2wvl_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, transferase, glycosyltransferase, retaining mecha glucosyl transferase; HET: GDD; 2.81A {Thermus thermophilus} PDB: 2wvk_A* 2wvm_A*
Probab=96.62 E-value=0.0029 Score=59.08 Aligned_cols=47 Identities=6% Similarity=0.024 Sum_probs=37.0
Q ss_pred CCceeEEEeccCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHH
Q 025906 105 LPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMR 160 (246)
Q Consensus 105 ~P~Vdv~V~tyNp~~E~~~vv~~Tl~~~~~ldYP~~kl~vyvlDDG~~d~t~~~~~ 160 (246)
...++|+||+|| |+. ..+.++++..+. +.+|+|+||||.|.|.....
T Consensus 52 ~~klSIVVPvYN---Ee~----~lLesVl~qi~~--d~eIIlVdDGS~D~s~~e~d 98 (391)
T 2wvl_A 52 LEQTAIVVPTRN---ERL----KLLEGVLSGIPH--EALILVASNSSPDRFQMERD 98 (391)
T ss_dssp HTTEEEEEEESS---CCH----HHHHHHHHTSCT--TSEEEEEECCCHHHHHHHHH
T ss_pred HhceEEEEeccC---cHH----HHHHHHHhcCCC--CceEEEEECCCCCChHhHHH
Confidence 578999999999 884 357777777765 78999999999997754333
No 15
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ...
Probab=96.46 E-value=0.0017 Score=58.01 Aligned_cols=43 Identities=7% Similarity=0.081 Sum_probs=37.2
Q ss_pred CCceeEEEeccCCCCCChHHHHHHHHHHh---cCCCCCCCcEEEEEcCCCCc
Q 025906 105 LPGIDVFICTADPTKEPTVEVMNTVLSAM---ALDYPPEKLHVYLSDDGGAS 153 (246)
Q Consensus 105 ~P~Vdv~V~tyNp~~E~~~vv~~Tl~~~~---~ldYP~~kl~vyvlDDG~~d 153 (246)
.|.|+|+||+|| ++ +.|..+|.++. +..|+ .++|+|+||+++.
T Consensus 64 ~~~VSIIIP~yN---~~-~~L~~~L~sl~~~l~q~~~--~~EIiVVdds~d~ 109 (287)
T 2fy7_A 64 PHKVAIIIPFRN---RQ-EHLKYWLYYLHPVLQRQQL--DYGIYVINQAGDT 109 (287)
T ss_dssp SCEEEEEEEESS---CH-HHHHHHHHHHHHHHHHTTC--EEEEEEEEECSSS
T ss_pred CCcEEEEEeeCC---CH-HHHHHHHHHHHHHHHHhcC--CceEEEEEeCCCC
Confidence 589999999999 76 89999999998 67787 7899999996543
No 16
>2zu9_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, glycosyltransferase, GT55, GDP, cytoplasm, magnesium, transferase; HET: GDP; 2.00A {Pyrococcus horikoshii} PDB: 2zu7_A* 2zu8_A*
Probab=96.28 E-value=0.0069 Score=56.90 Aligned_cols=41 Identities=10% Similarity=0.047 Sum_probs=29.3
Q ss_pred CceeEEEeccCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCccc
Q 025906 106 PGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASIT 155 (246)
Q Consensus 106 P~Vdv~V~tyNp~~E~~~vv~~Tl~~~~~ldYP~~kl~vyvlDDG~~d~t 155 (246)
..++|+||+|| |+..++...+.. +.| ..+|+|+||||+|.|
T Consensus 51 ~~iSVVIP~yN---EE~~lI~~vL~~---i~~---~~eIIvVDDgSrD~t 91 (394)
T 2zu9_A 51 GKMAVIVPMKN---EKLHLVDGVLKA---IPH---KCPIIIVSNSKREGP 91 (394)
T ss_dssp TTEEEEEEESS---CCHHHHHHHHHH---SCT---TSCEEEEECCCCSSS
T ss_pred CCEEEEEecCc---ccHHHHHHHHHc---CCC---CcEEEEEECcCcccc
Confidence 47999999999 884444443333 233 347999999998877
No 17
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*
Probab=95.87 E-value=0.006 Score=56.07 Aligned_cols=44 Identities=18% Similarity=0.259 Sum_probs=38.5
Q ss_pred CCceeEEEeccCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCc
Q 025906 105 LPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGAS 153 (246)
Q Consensus 105 ~P~Vdv~V~tyNp~~E~~~vv~~Tl~~~~~ldYP~~kl~vyvlDDG~~d 153 (246)
++.+.|+|+||| -| + +++++.++++.+.+.+...|+|.|||+.+
T Consensus 1 ~~~~pViI~~yN---Rp-~-l~~~L~sL~~~~p~~~~~~iivsdDgs~~ 44 (343)
T 1fo8_A 1 LAVIPILVIACD---RS-T-VRRCLDKLLHYRPSAELFPIIVSQDCGHE 44 (343)
T ss_dssp CCCCCEEEEESS---CT-T-HHHHHHHHHHHCSCTTTSCEEEEECTTCH
T ss_pred CCcccEEEEECC---cH-H-HHHHHHHHHhcCCCcCCcEEEEEECCCCH
Confidence 356889999999 66 7 99999999999977777899999999976
No 18
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*
Probab=95.74 E-value=0.013 Score=50.05 Aligned_cols=44 Identities=9% Similarity=-0.047 Sum_probs=33.9
Q ss_pred CCCceeEEEeccCCCCCChHHHHHHHHHHhc-CCCCCCCcEEEEEcCCCCc
Q 025906 104 QLPGIDVFICTADPTKEPTVEVMNTVLSAMA-LDYPPEKLHVYLSDDGGAS 153 (246)
Q Consensus 104 ~~P~Vdv~V~tyNp~~E~~~vv~~Tl~~~~~-ldYP~~kl~vyvlDDG~~d 153 (246)
..|.|+| ||+|| ++ +.++++|.++.. +..+.. ++|+|+|+|++|
T Consensus 14 ~~~~iSI-I~~yN---~~-~~l~~~l~sl~~sl~~q~~-~EiIVVDn~s~d 58 (249)
T 2nxv_A 14 STLMFSV-CSLVR---DQ-AKYDRLLESFERFGFTPDK-AEFLAADNREGN 58 (249)
T ss_dssp CCCSEEE-EEEES---CH-HHHHHHHHHHHHTTCCTTT-EEEEEEECTTSC
T ss_pred CcceEEE-EEeeC---CH-HHHHHHHHHHHHhccCCCc-EEEEEEECCCCC
Confidence 4578887 57799 64 899999998763 444432 899999999988
No 19
>2l9u_A Receptor tyrosine-protein kinase ERBB-3; transmenbrane dimer, membrane protein, EGFR; NMR {Homo sapiens}
Probab=34.34 E-value=34 Score=21.26 Aligned_cols=11 Identities=18% Similarity=0.265 Sum_probs=7.5
Q ss_pred HHHHHHHHHhh
Q 025906 39 SLAFLVYYRVS 49 (246)
Q Consensus 39 ~~~~Yl~wR~~ 49 (246)
++..+++||-.
T Consensus 23 lg~tflywrgr 33 (40)
T 2l9u_A 23 LGGTFLYWRGR 33 (40)
T ss_dssp HHHHHHHHHHH
T ss_pred hCceeEEEccc
Confidence 34568899854
No 20
>3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai}
Probab=29.34 E-value=1.8e+02 Score=23.74 Aligned_cols=52 Identities=8% Similarity=0.142 Sum_probs=33.1
Q ss_pred hHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccH-------------HHHHHHHHHhhchHHHHHHcCCC
Q 025906 122 TVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITL-------------LGMREAWKFARSWLPFCKRFGIK 179 (246)
Q Consensus 122 ~~vv~~Tl~~~~~ldYP~~kl~vyvlDDG~~d~t~-------------~~~~ea~~~a~~w~~lc~~~gv~ 179 (246)
.+.+++-+..+..+-.= -++|++..||...... ..+... ..+..+|+++|+.
T Consensus 41 ~~~~~~~l~~~k~~G~N--~vRv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----d~~~~~a~~~Gi~ 105 (351)
T 3vup_A 41 KNRIEPEFKKLHDAGGN--SMRLWIHIQGETTPAFNDQGFVTGPDKQGTMLDDM----KDLLDTAKKYNIL 105 (351)
T ss_dssp HHHHHHHHHHHHHTTCC--EEEEEEEETTSSSSEECTTSCEEESCSSSCHHHHH----HHHHHHHHHTTCE
T ss_pred HHHHHHHHHHHHHcCCc--EEEECcccccccCcccccccccccccccHHHHHHH----HHHHHHHHHCCCe
Confidence 45677778888887754 8999998777542111 011111 2345899999986
No 21
>3rfr_C PMOC; membrane, oxidoreductase; 2.68A {Methylocystis SP} PDB: 3chx_C
Probab=25.54 E-value=1.4e+02 Score=26.03 Aligned_cols=62 Identities=16% Similarity=0.141 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCCCCCcch-----hHHHHHHHHHHHHHHHHHHH-HHHHhhcccCCC
Q 025906 32 LVLLHFTSLAFLVYYRVSYFFQVSNARAAP-----LLPWLLVFAAELLLSFQWLL-GIAYRWRPISRT 93 (246)
Q Consensus 32 ~~~~~l~~~~~Yl~wR~~~tl~~~~~~~~~-----~~~wi~l~~aE~~~~~~~lL-~~~~~~~p~~r~ 93 (246)
+.+..++..+.|+.||+..-.-.-..+.++ --+|..++..|+..-....+ ..-..|+..+|.
T Consensus 24 ~~~g~~~l~~~y~~~r~Yqq~faw~~GLDs~~PeF~~yWm~ll~~e~~l~~~~~~~~~g~lWkTRdr~ 91 (256)
T 3rfr_C 24 MWIGLAVLNVFYLIVRIYEQVFGWRAGLDSFAPEFQTYWMSILWTEIPLELVSGLGLAGYLWKTRDRN 91 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTTSSCTTSHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHTCCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHheeecCcc
Confidence 335555556778888876432110111111 23577777777765433222 222356665554
No 22
>4awe_A Endo-beta-D-1,4-mannanase; hydrolase, endo-mannanase, glycosyl hydrolase, GH5; HET: NAG; 1.40A {Neurospora sitophila}
Probab=22.46 E-value=3.2e+02 Score=22.30 Aligned_cols=28 Identities=11% Similarity=0.112 Sum_probs=21.0
Q ss_pred hHHHHHHHHHHhcCCCCCCCcEEEEEcCCC
Q 025906 122 TVEVMNTVLSAMALDYPPEKLHVYLSDDGG 151 (246)
Q Consensus 122 ~~vv~~Tl~~~~~ldYP~~kl~vyvlDDG~ 151 (246)
.+-+++.+..+..+-.- -++|+...||.
T Consensus 36 ~~~~~~~l~~~~~~G~N--~iR~w~~~~g~ 63 (387)
T 4awe_A 36 QPDIEKGMTAARAAGLT--VFRTWGFNDKN 63 (387)
T ss_dssp HHHHHHHHHHHHHTTCC--EEEEECCCEEE
T ss_pred HHHHHHHHHHHHhCCCC--EEEeCcccCCC
Confidence 46788889998888755 78888765553
No 23
>2yl6_A Beta-N-acetylhexosaminidase; peptidoglycan-anchor, hydrolase; HET: ETE; 1.60A {Streptococcus pneumoniae} PDB: 2yll_A* 2yl8_A* 3rpm_A*
Probab=20.77 E-value=1.3e+02 Score=27.83 Aligned_cols=29 Identities=21% Similarity=0.375 Sum_probs=23.2
Q ss_pred CChHHHHHHHHHHhcCCCCCCCcEEEEEcCC
Q 025906 120 EPTVEVMNTVLSAMALDYPPEKLHVYLSDDG 150 (246)
Q Consensus 120 E~~~vv~~Tl~~~~~ldYP~~kl~vyvlDDG 150 (246)
-+++.|.++|..+....+= .++.++.|||
T Consensus 19 ~~~~~ik~~ID~mA~~KlN--~lH~HLtDdg 47 (434)
T 2yl6_A 19 FSPEQLKEIIDKAKHYGYT--DLHLLVGNDG 47 (434)
T ss_dssp CCHHHHHHHHHHHHHHTCC--EEEEEEESSS
T ss_pred CCHHHHHHHHHHHHHhcCC--eEEEEecCCC
Confidence 3678999999877776654 8999999975
No 24
>2r41_A Uncharacterized protein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics; 2.90A {Enterococcus faecalis}
Probab=20.19 E-value=50 Score=25.39 Aligned_cols=11 Identities=27% Similarity=0.576 Sum_probs=9.9
Q ss_pred EEEEEcCCCCc
Q 025906 143 HVYLSDDGGAS 153 (246)
Q Consensus 143 ~vyvlDDG~~d 153 (246)
+|||+|||++.
T Consensus 89 ~V~viD~~~~e 99 (110)
T 2r41_A 89 RIFAFDDGHRE 99 (110)
T ss_dssp EEEEEECSSCE
T ss_pred EEEEEeCCCcE
Confidence 79999999975
Done!