Query 025912
Match_columns 246
No_of_seqs 88 out of 90
Neff 3.7
Searched_HMMs 13730
Date Mon Mar 25 20:27:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025912.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/025912hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1fxka_ a.2.5.1 (A:) Prefoldin 75.7 3.8 0.00027 29.4 6.6 41 138-181 63-103 (107)
2 d1qvra2 c.37.1.20 (A:149-535) 70.9 17 0.0013 31.3 11.0 54 140-193 289-342 (387)
3 d1qvra2 c.37.1.20 (A:149-535) 70.2 24 0.0017 30.4 11.7 100 77-179 253-362 (387)
4 d2efla1 a.238.1.4 (A:1-288) Fo 66.2 25 0.0018 26.8 17.3 52 61-118 76-127 (288)
5 d1seta1 a.2.7.1 (A:1-110) Sery 64.5 20 0.0015 25.2 9.2 27 123-149 68-94 (110)
6 d1seta1 a.2.7.1 (A:1-110) Sery 63.8 18 0.0013 25.4 8.1 29 121-149 30-58 (110)
7 d1fxka_ a.2.5.1 (A:) Prefoldin 62.1 23 0.0016 24.9 12.1 81 122-223 4-103 (107)
8 d2ooca1 a.24.10.6 (A:8-111) Hi 52.6 11 0.00083 26.5 5.2 57 75-137 37-93 (104)
9 d2py8a1 a.280.1.1 (A:2-121) Ru 47.7 28 0.0021 26.2 7.0 61 56-118 54-115 (120)
10 d1fxkc_ a.2.5.1 (C:) Prefoldin 46.4 45 0.0033 23.6 10.9 42 143-184 4-45 (133)
11 d1vcsa1 a.47.2.1 (A:8-96) Vesi 39.3 55 0.004 22.6 7.9 26 140-165 60-85 (89)
12 d2d8da1 a.130.1.1 (A:3-82) Cho 37.9 36 0.0026 22.5 5.7 35 121-155 3-37 (80)
13 d2azeb1 e.63.1.2 (B:201-301) T 35.0 40 0.0029 24.2 5.9 34 122-155 4-37 (101)
14 d2peoa1 a.280.1.1 (A:1-115) Ru 34.7 55 0.004 24.2 6.8 59 55-115 53-112 (115)
15 d1ybza1 a.130.1.1 (A:2-75) mon 34.5 43 0.0031 22.1 5.6 36 121-156 3-38 (74)
16 d1cxzb_ a.2.6.1 (B:) Protein k 34.5 72 0.0053 22.6 7.8 39 100-138 36-75 (86)
17 d2iaza1 a.281.1.2 (A:1-111) Hy 32.5 73 0.0053 22.1 7.1 101 104-218 1-102 (111)
18 d2ap3a1 a.24.27.1 (A:12-196) H 31.0 69 0.005 21.3 10.7 25 132-156 115-139 (185)
19 d1vf7a_ f.46.1.1 (A:) Multidru 25.7 51 0.0037 24.3 5.2 22 207-228 92-113 (237)
20 d1ykhb1 a.252.1.1 (B:2-130) RN 25.4 1.2E+02 0.0087 22.2 9.4 74 68-155 54-127 (129)
21 d1ecma_ a.130.1.1 (A:) Chorism 24.9 91 0.0066 20.7 6.8 36 120-155 2-37 (91)
22 d1fxkc_ a.2.5.1 (C:) Prefoldin 24.6 1.1E+02 0.0078 21.4 11.1 37 66-102 4-40 (133)
23 d1ab4a_ e.11.1.1 (A:) DNA Gyra 23.4 2.2E+02 0.016 24.6 10.2 44 134-180 441-484 (493)
24 d2efka1 a.238.1.4 (A:10-288) C 21.5 1.5E+02 0.011 22.0 16.2 12 165-176 199-210 (279)
25 d2azeb1 e.63.1.2 (B:201-301) T 21.0 87 0.0063 22.2 5.5 34 128-161 3-36 (101)
No 1
>d1fxka_ a.2.5.1 (A:) Prefoldin beta subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=75.75 E-value=3.8 Score=29.35 Aligned_cols=41 Identities=7% Similarity=0.130 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHH
Q 025912 138 LCVIKQEMIKDLNEINGDLAKARDESKDMAAIKAEIETERQEIH 181 (246)
Q Consensus 138 L~a~RQELs~qvq~ltqeL~r~~~d~qqip~l~aEid~lrqElq 181 (246)
...+..+|..++..+..++.++. +|+-.+..+++.++.+|+
T Consensus 63 ~~e~~~~l~~~~e~l~~~i~~l~---~q~~~l~~~l~~~~~~l~ 103 (107)
T d1fxka_ 63 KDELTEELQEKLETLQLREKTIE---RQEERVMKKLQEMQVNIQ 103 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHH
Confidence 34444555555555555544432 234444455555554443
No 2
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=70.91 E-value=17 Score=31.29 Aligned_cols=54 Identities=7% Similarity=0.260 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhccc
Q 025912 140 VIKQEMIKDLNEINGDLAKARDESKDMAAIKAEIETERQEIHKGRAAIECEKKN 193 (246)
Q Consensus 140 a~RQELs~qvq~ltqeL~r~~~d~qqip~l~aEid~lrqElqr~Raa~EyEKK~ 193 (246)
....+|..+...++...........++-.++.+|+.++.++..+....+|++-+
T Consensus 289 ~el~~lee~~~~L~~~w~~ek~~l~~i~~Lk~~Le~lr~~le~A~r~gd~e~Aa 342 (387)
T d1qvra2 289 AEIAKLTEEIAKLRAEWEREREILRKLREAQHRLDEVRREIELAERQYDLNRAA 342 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCHHHHH
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHH
Confidence 334444445555666666666667777788888888888887777777776643
No 3
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=70.24 E-value=24 Score=30.38 Aligned_cols=100 Identities=18% Similarity=0.261 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhhhhHHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 025912 77 QELSLAEQELRHLSSVAASVKAERDAEVRELYEKSLKLDAELRVIESMHAELDRVRADIEKLCVIKQEMIKDLNEINGDL 156 (246)
Q Consensus 77 QeL~aaq~El~~l~~~i~~i~aE~e~qiReL~ek~~KmEAelRa~e~lk~El~Q~r~e~q~L~a~RQELs~qvq~ltqeL 156 (246)
.+|...+.++..+..-...++.|++... .++..+++.++...+.-...+..--...+.+...=++|..++..+..++
T Consensus 253 ~el~~ler~I~qLe~E~~aL~ke~d~~s---~~rl~~le~el~~lee~~~~L~~~w~~ek~~l~~i~~Lk~~Le~lr~~l 329 (387)
T d1qvra2 253 EEIDALERKKLQLEIEREALKKEKDPDS---QERLKAIEAEIAKLTEEIAKLRAEWEREREILRKLREAQHRLDEVRREI 329 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSSCSSHHH---HSCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccchHH---HHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3566666667666666666666665332 2233333333332222222222222222222222333444444455554
Q ss_pred HHHhhh----------hhhhHHHHHHHHHHHHH
Q 025912 157 AKARDE----------SKDMAAIKAEIETERQE 179 (246)
Q Consensus 157 ~r~~~d----------~qqip~l~aEid~lrqE 179 (246)
..++.+ ...+|.++.|++.+..+
T Consensus 330 e~A~r~gd~e~AaeL~y~~ip~le~el~~l~~~ 362 (387)
T d1qvra2 330 ELAERQYDLNRAAELRYGELPKLEAEVEALSEK 362 (387)
T ss_dssp HHHTTTTCHHHHHHHHTTHHHHHHHHHHHHHHH
T ss_pred HHHHHcccHHHHHHHhhchHHHHHHHHHHHHHH
Confidence 443321 13467777777665443
No 4
>d2efla1 a.238.1.4 (A:1-288) Formin-binding protein 1, FNBP1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=66.23 E-value=25 Score=26.79 Aligned_cols=52 Identities=15% Similarity=0.227 Sum_probs=23.4
Q ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhhhhHHhh
Q 025912 61 LLQDNQRLAATHVALKQELSLAEQELRHLSSVAASVKAERDAEVRELYEKSLKLDAEL 118 (246)
Q Consensus 61 Ll~dNqRLAatHvaLrQeL~aaq~El~~l~~~i~~i~aE~e~qiReL~ek~~KmEAel 118 (246)
++.+....|..|..+-+.|.. +-+..+...+ .+.+...+.+.+...|++.++
T Consensus 76 ~~~~~~~~a~~h~~~a~~l~~--~i~~~l~~~~----~~~~~~~K~~~~~~~k~~k~~ 127 (288)
T d2efla1 76 NLNEMNDYAGQHEVISENMAS--QIIVDLARYV----QELKQERKSNFHDGRKAQQHI 127 (288)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHH
Confidence 334444455555554444432 1122222222 244455555666555555554
No 5
>d1seta1 a.2.7.1 (A:1-110) Seryl-tRNA synthetase (SerRS) {Thermus thermophilus, strain hb27 [TaxId: 274]}
Probab=64.53 E-value=20 Score=25.18 Aligned_cols=27 Identities=15% Similarity=0.090 Sum_probs=12.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 025912 123 SMHAELDRVRADIEKLCVIKQEMIKDL 149 (246)
Q Consensus 123 ~lk~El~Q~r~e~q~L~a~RQELs~qv 149 (246)
.+++++..+..+++.|...-+++..++
T Consensus 68 ~l~~~~k~lk~~i~~le~~~~~~~~~l 94 (110)
T d1seta1 68 ALIARGKALGEEAKRLEEALREKEARL 94 (110)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555455555554444444444433
No 6
>d1seta1 a.2.7.1 (A:1-110) Seryl-tRNA synthetase (SerRS) {Thermus thermophilus, strain hb27 [TaxId: 274]}
Probab=63.82 E-value=18 Score=25.44 Aligned_cols=29 Identities=7% Similarity=0.314 Sum_probs=14.7
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 025912 121 IESMHAELDRVRADIEKLCVIKQEMIKDL 149 (246)
Q Consensus 121 ~e~lk~El~Q~r~e~q~L~a~RQELs~qv 149 (246)
+-.+-.+...+..+++.|.+.|..++.++
T Consensus 30 i~~ld~~rr~l~~~~e~l~~~rN~~sk~i 58 (110)
T d1seta1 30 LLALDREVQELKKRLQEVQTERNQVAKRV 58 (110)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333444445555555555555555544
No 7
>d1fxka_ a.2.5.1 (A:) Prefoldin beta subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=62.13 E-value=23 Score=24.95 Aligned_cols=81 Identities=17% Similarity=0.314 Sum_probs=46.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHhhhh----------------hhhHHHHHHHHHHHHHHHh
Q 025912 122 ESMHAELDRVRADIEKLCVIKQEMIKDLNE---INGDLAKARDES----------------KDMAAIKAEIETERQEIHK 182 (246)
Q Consensus 122 e~lk~El~Q~r~e~q~L~a~RQELs~qvq~---ltqeL~r~~~d~----------------qqip~l~aEid~lrqElqr 182 (246)
+..=+.+.+++.+++.+...++.|.++++. .-.+|...-.|. .-+|.|..-++.+..++.
T Consensus 4 qe~~~~~q~lq~el~~~~~q~~~le~q~~E~~~vl~eL~~l~~d~~vyk~vG~vLv~~~~~e~~~~l~~~~e~l~~~i~- 82 (107)
T d1fxka_ 4 QHQLAQFQQLQQQAQAISVQKQTVEMQINETQKALEELSRAADDAEVYKSSGNILIRVAKDELTEELQEKLETLQLREK- 82 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCCEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccHHHHHhcchhhcCcHHHHHHHHHHHHHHHHHHHH-
Confidence 334456667777777777777777775544 334555544431 125556666666655544
Q ss_pred hhhhhhhhcccccchhHHHHHHHHhHHHHHHHHHHHHHHHh
Q 025912 183 GRAAIECEKKNRASNHEQREIMEKNIISVAQQIERLQAELA 223 (246)
Q Consensus 183 ~Raa~EyEKK~~~e~~Eq~qaMEkNlisMarEvEKLRaEla 223 (246)
.+++++-..-.++++++..+.
T Consensus 83 --------------------~l~~q~~~l~~~l~~~~~~l~ 103 (107)
T d1fxka_ 83 --------------------TIERQEERVMKKLQEMQVNIQ 103 (107)
T ss_dssp --------------------HHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------HHHHHHHHHHHHHHHHHHHHH
Confidence 355555556666666666553
No 8
>d2ooca1 a.24.10.6 (A:8-111) Histidine phosphotransferase ShpA {Caulobacter crescentus [TaxId: 155892]}
Probab=52.62 E-value=11 Score=26.48 Aligned_cols=57 Identities=21% Similarity=0.176 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhhhhHHhhhchhhHHHHHHHHHHHHHH
Q 025912 75 LKQELSLAEQELRHLSSVAASVKAERDAEVRELYEKSLKLDAELRVIESMHAELDRVRADIEK 137 (246)
Q Consensus 75 LrQeL~aaq~El~~l~~~i~~i~aE~e~qiReL~ek~~KmEAelRa~e~lk~El~Q~r~e~q~ 137 (246)
|.++....+.-.|.|+-..+.+-+.. |.+-+..||...++.+.+..++.++-.++..
T Consensus 37 l~~d~~~~~~~aH~LKGsa~~iGa~~------L~~~a~~lE~~~~~~~~~~~~l~~~~~~i~~ 93 (104)
T d2ooca1 37 LDPTHPGWKDAVHTVKGAARGVGAFN------LGEVCERCEAGQESLEGVRTALDAALLDIAA 93 (104)
T ss_dssp CSTTSTTHHHHHHHHHHHHHHHTCHH------HHHHHHHHHTTSSCHHHHHHHHHHHHHHHHH
T ss_pred HccCHHHHHHHHHHHHhHHHHcCHHH------HHHHHHHHHHHHHccCchHHHHHHHHHHHHH
Confidence 45677778888999999888888877 7888888999999999998888888765443
No 9
>d2py8a1 a.280.1.1 (A:2-121) RuBisCo chaperone RbcX {Synechocystis sp., strain PCC 6803 [TaxId: 1143]}
Probab=47.66 E-value=28 Score=26.18 Aligned_cols=61 Identities=23% Similarity=0.309 Sum_probs=47.4
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH-HHhhhhhhhhHHHHHHHHHHHhhhhHHhh
Q 025912 56 SDIQSLLQDNQRLAATHVALKQELSLAEQELRHL-SSVAASVKAERDAEVRELYEKSLKLDAEL 118 (246)
Q Consensus 56 ~EiqrLl~dNqRLAatHvaLrQeL~aaq~El~~l-~~~i~~i~aE~e~qiReL~ek~~KmEAel 118 (246)
.=|+.|+.+|+.||--.+..|.-++.- ...-+ ..+...|+..+-..+|..++|+..++..+
T Consensus 54 ~fl~~L~~e~~~lAlRIm~vRe~lAee--v~d~l~emv~~~I~~~N~e~~Rq~Ler~t~~~~~~ 115 (120)
T d2py8a1 54 TFLTELLDENKELVLRILAVREDIAES--VLDFLPGMTRNSLAESNIAHRRHLLERLTRTVAEV 115 (120)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHH--HGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhCHHHHHHHHHHHHHHHHH--HHHHhHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 348899999999999999999988753 22223 23455677888889999999999988764
No 10
>d1fxkc_ a.2.5.1 (C:) Prefoldin alpha subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=46.35 E-value=45 Score=23.62 Aligned_cols=42 Identities=14% Similarity=0.230 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhh
Q 025912 143 QEMIKDLNEINGDLAKARDESKDMAAIKAEIETERQEIHKGR 184 (246)
Q Consensus 143 QELs~qvq~ltqeL~r~~~d~qqip~l~aEid~lrqElqr~R 184 (246)
++|..+++.+.+++...++...++-...+|++.+..-+..+.
T Consensus 4 ~eL~~~~~~l~~~l~~l~~~i~~l~~~~~e~~~~~~~L~~l~ 45 (133)
T d1fxkc_ 4 AEIVAQLNIYQSQVELIQQQMEAVRATISELEILEKTLSDIQ 45 (133)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 345555555555555555555555555555555555555443
No 11
>d1vcsa1 a.47.2.1 (A:8-96) Vesicle transport v-SNARE protein Vti1-like 2 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=39.32 E-value=55 Score=22.65 Aligned_cols=26 Identities=8% Similarity=0.111 Sum_probs=15.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhh
Q 025912 140 VIKQEMIKDLNEINGDLAKARDESKD 165 (246)
Q Consensus 140 a~RQELs~qvq~ltqeL~r~~~d~qq 165 (246)
+.|..+.+++.....||.+++.+.++
T Consensus 60 s~R~~~~~klr~Yk~dl~~lk~elk~ 85 (89)
T d1vcsa1 60 QSRGMYSNRMRSYKQEMGKLETDFKR 85 (89)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHTHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 35666777666665555555544443
No 12
>d2d8da1 a.130.1.1 (A:3-82) Chorismate mutase domain of P-protein {Thermus thermophilus [TaxId: 274]}
Probab=37.94 E-value=36 Score=22.51 Aligned_cols=35 Identities=20% Similarity=0.515 Sum_probs=30.3
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 025912 121 IESMHAELDRVRADIEKLCVIKQEMIKDLNEINGD 155 (246)
Q Consensus 121 ~e~lk~El~Q~r~e~q~L~a~RQELs~qvq~ltqe 155 (246)
.+.+|.++..+-.++-.|...|.+++.+|-.+.+.
T Consensus 3 L~~lR~~ID~iD~~i~~Ll~~R~~~~~~i~~~K~~ 37 (80)
T d2d8da1 3 IQALRKEVDRVNREILRLLSERGRLVQEIGRLQTE 37 (80)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 56789999999999999999999999888777654
No 13
>d2azeb1 e.63.1.2 (B:201-301) Transcription factor E2F1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=35.03 E-value=40 Score=24.15 Aligned_cols=34 Identities=15% Similarity=0.250 Sum_probs=24.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 025912 122 ESMHAELDRVRADIEKLCVIKQEMIKDLNEINGD 155 (246)
Q Consensus 122 e~lk~El~Q~r~e~q~L~a~RQELs~qvq~ltqe 155 (246)
..|++|+..+..+-+.|-...+.+..+++.++.|
T Consensus 4 ~~L~~El~~L~~~E~~LD~li~~~~~~L~~lted 37 (101)
T d2azeb1 4 EGLTQDLRQLQESEQQLDHLMNICTTQLRLLSED 37 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 4577777777777777777777777777777765
No 14
>d2peoa1 a.280.1.1 (A:1-115) RuBisCo chaperone RbcX {Anabaena sp. [TaxId: 1167]}
Probab=34.65 E-value=55 Score=24.18 Aligned_cols=59 Identities=15% Similarity=0.275 Sum_probs=44.8
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH-HHhhhhhhhhHHHHHHHHHHHhhhhH
Q 025912 55 HSDIQSLLQDNQRLAATHVALKQELSLAEQELRHL-SSVAASVKAERDAEVRELYEKSLKLD 115 (246)
Q Consensus 55 ~~EiqrLl~dNqRLAatHvaLrQeL~aaq~El~~l-~~~i~~i~aE~e~qiReL~ek~~KmE 115 (246)
..=|+.|+.+|+.||--.+.-|.-++ +....-+ ..+...|+..+...+|+.+++.-.++
T Consensus 53 d~~l~~L~~e~~~lA~RIm~vR~~ya--e~~~e~~~e~~~~~I~~~N~elmR~~Ler~t~~~ 112 (115)
T d2peoa1 53 EKYIEELFLEKPDLALRIMTVREHIA--EEIAEFLPEMVVTGIQQANMEKRRQHLERMTQVS 112 (115)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHHHHHH--HHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhCHHHHHHHHHHHHHHH--HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 34488999999999999999988874 4444333 34556778888888999998887765
No 15
>d1ybza1 a.130.1.1 (A:2-75) mono-domain chorismate mutase {Pyrococcus furiosus [TaxId: 2261]}
Probab=34.48 E-value=43 Score=22.14 Aligned_cols=36 Identities=19% Similarity=0.414 Sum_probs=31.2
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 025912 121 IESMHAELDRVRADIEKLCVIKQEMIKDLNEINGDL 156 (246)
Q Consensus 121 ~e~lk~El~Q~r~e~q~L~a~RQELs~qvq~ltqeL 156 (246)
.+.+|+++..+-.++=.|.+.|-+++.+|-.+.++.
T Consensus 3 L~~lR~~ID~iD~~i~~Ll~~R~~~~~~I~~~K~~~ 38 (74)
T d1ybza1 3 LKLLRKEIDKIDNQIISLLKKRLEIAQAIGKIKKEL 38 (74)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 578999999999999999999999999888776654
No 16
>d1cxzb_ a.2.6.1 (B:) Protein kinase c-like 1, pkn/prk1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=34.48 E-value=72 Score=22.58 Aligned_cols=39 Identities=15% Similarity=0.240 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHhhhhHHhh-hchhhHHHHHHHHHHHHHHH
Q 025912 100 RDAEVRELYEKSLKLDAEL-RVIESMHAELDRVRADIEKL 138 (246)
Q Consensus 100 ~e~qiReL~ek~~KmEAel-Ra~e~lk~El~Q~r~e~q~L 138 (246)
+|+.|++=.++..+-=.+- +..+.|..||..+-.-++.|
T Consensus 36 KELKIKeGAENL~~attd~kk~~~~V~~eL~~sN~kL~~L 75 (86)
T d1cxzb_ 36 KELKLKEGAENLRRATTDLGRSLGPVELLLRGSSRRLDLL 75 (86)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHhHHHhHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHH
Confidence 7888888888888765553 45566666665555433333
No 17
>d2iaza1 a.281.1.2 (A:1-111) Hypothetical protein SP1372 {Streptococcus pneumoniae [TaxId: 1313]}
Probab=32.52 E-value=73 Score=22.07 Aligned_cols=101 Identities=15% Similarity=0.220 Sum_probs=53.6
Q ss_pred HHHHHHHhhhhHHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh-hhHHHHHHHHHHHHHHHh
Q 025912 104 VRELYEKSLKLDAELRVIESMHAELDRVRADIEKLCVIKQEMIKDLNEINGDLAKARDESK-DMAAIKAEIETERQEIHK 182 (246)
Q Consensus 104 iReL~ek~~KmEAelRa~e~lk~El~Q~r~e~q~L~a~RQELs~qvq~ltqeL~r~~~d~q-qip~l~aEid~lrqElqr 182 (246)
|..+||++..|...|+..+..+. +..+...+.. ...=+.|..+.+.+..+++..+.--+ --+....+++.+..+++.
T Consensus 1 M~nI~d~A~eL~~~I~~s~ey~~-~~~a~~~v~~-D~ea~~l~~~f~~~q~~lq~~q~~G~~~~~e~~~~l~~l~~~i~~ 78 (111)
T d2iaza1 1 MSNIYDSANELSRGLRGLPEYKA-VKAAKDAIAA-DAEASKIFTDYLAFQEEIQKLAQTGQMPDASFQAKMEGFGKQIQG 78 (111)
T ss_dssp HHHHHHHHHHHHHHHHTSHHHHH-HHHHHHHHHH-CHHHHHHHHHHHHHGGGTTTTCC----CCHHHHHHHHHHHHHHHT
T ss_pred CccHHHHHHHHHHHHHcCHHHHH-HHHHHHHHHc-CHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhc
Confidence 56799999999999999987753 3333332221 11223334444444444444332111 123344555555555442
Q ss_pred hhhhhhhhcccccchhHHHHHHHHhHHHHHHHHHHH
Q 025912 183 GRAAIECEKKNRASNHEQREIMEKNIISVAQQIERL 218 (246)
Q Consensus 183 ~Raa~EyEKK~~~e~~Eq~qaMEkNlisMarEvEKL 218 (246)
.+.+-....-|.+|-.|-.+|-+.
T Consensus 79 ------------n~~i~~~~~Ae~~l~~ll~~Vn~i 102 (111)
T d2iaza1 79 ------------NSLLSEFFTKQQQLAIYLSDIEKI 102 (111)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ------------CHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444455566777777766654
No 18
>d2ap3a1 a.24.27.1 (A:12-196) Hypothetical protein MW0975 (SA0943) {Staphylococcus aureus [TaxId: 1280]}
Probab=31.01 E-value=69 Score=21.27 Aligned_cols=25 Identities=4% Similarity=-0.100 Sum_probs=9.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 025912 132 RADIEKLCVIKQEMIKDLNEINGDL 156 (246)
Q Consensus 132 r~e~q~L~a~RQELs~qvq~ltqeL 156 (246)
......+....+.+......+...+
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (185)
T d2ap3a1 115 YKLHSDYAKAYKKAVNSEKTLFKYL 139 (185)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 3333333333333333333333333
No 19
>d1vf7a_ f.46.1.1 (A:) Multidrug resistance protein MexA domain {Pseudomonas aeruginosa [TaxId: 287]}
Probab=25.66 E-value=51 Score=24.30 Aligned_cols=22 Identities=9% Similarity=0.134 Sum_probs=9.6
Q ss_pred hHHHHHHHHHHHHHHHhhHhhh
Q 025912 207 NIISVAQQIERLQAELANAEKR 228 (246)
Q Consensus 207 NlisMarEvEKLRaElanaEkR 228 (246)
++-.....++..+..|..+.-+
T Consensus 92 ~~~~a~~~l~~a~~~l~~~~i~ 113 (237)
T d1vf7a_ 92 AYLQSKAAVEQARINLRYTKVL 113 (237)
T ss_dssp HHHHHHHHHHHHHHHHHTTEEE
T ss_pred hcchhHHHHHHHhhhhcccccc
Confidence 3333333444555555444433
No 20
>d1ykhb1 a.252.1.1 (B:2-130) RNA polymerase II holoenzyme component SRB7 (MED21) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=25.37 E-value=1.2e+02 Score=22.20 Aligned_cols=74 Identities=16% Similarity=0.243 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhhhhHHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 025912 68 LAATHVALKQELSLAEQELRHLSSVAASVKAERDAEVRELYEKSLKLDAELRVIESMHAELDRVRADIEKLCVIKQEMIK 147 (246)
Q Consensus 68 LAatHvaLrQeL~aaq~El~~l~~~i~~i~aE~e~qiReL~ek~~KmEAelRa~e~lk~El~Q~r~e~q~L~a~RQELs~ 147 (246)
|.+.-..|-.+|+..-+.|..|-..++.+..-.|.|. .++.+||.|++..+ +|+..+-. ...+|..
T Consensus 54 f~~~~~elA~dii~kakqId~LI~sLP~~~~see~Q~----~~i~~Le~E~~~~~---~el~~~v~-------e~e~ll~ 119 (129)
T d1ykhb1 54 FSNTIDELSTDIILKTRQINKLIDSLPGVDVSAEEQL----RKIDMLQKKLVEVE---DEKIEAIK-------KKEKLMR 119 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSTTTTCCHHHHH----HHHHHHHHHHHHHH---HHHHHHHH-------HHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHhCCCCCCCHHHHH----HHHHHHHHHHHHHH---HHHHHHHH-------HHHHHHH
Confidence 3444555667788888899999888988876555554 56677777755443 33333333 3444555
Q ss_pred HHHHHHHH
Q 025912 148 DLNEINGD 155 (246)
Q Consensus 148 qvq~ltqe 155 (246)
+|+.+-.|
T Consensus 120 ~i~~~i~~ 127 (129)
T d1ykhb1 120 HVDSMIED 127 (129)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHH
Confidence 55555433
No 21
>d1ecma_ a.130.1.1 (A:) Chorismate mutase domain of P-protein {Escherichia coli [TaxId: 562]}
Probab=24.87 E-value=91 Score=20.70 Aligned_cols=36 Identities=6% Similarity=0.131 Sum_probs=30.4
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 025912 120 VIESMHAELDRVRADIEKLCVIKQEMIKDLNEINGD 155 (246)
Q Consensus 120 a~e~lk~El~Q~r~e~q~L~a~RQELs~qvq~ltqe 155 (246)
+.+.+|.++..+-.++-.|...|-+|+.+|-.+.+.
T Consensus 2 ~L~~lR~~ID~iD~~i~~Ll~~R~~l~~~I~~~K~~ 37 (91)
T d1ecma_ 2 PLLALREKISALDEKLLALLAERRELAVEVGKAKLL 37 (91)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 357789999999999999999999999888776654
No 22
>d1fxkc_ a.2.5.1 (C:) Prefoldin alpha subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=24.61 E-value=1.1e+02 Score=21.42 Aligned_cols=37 Identities=8% Similarity=0.198 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHHH
Q 025912 66 QRLAATHVALKQELSLAEQELRHLSSVAASVKAERDA 102 (246)
Q Consensus 66 qRLAatHvaLrQeL~aaq~El~~l~~~i~~i~aE~e~ 102 (246)
+.|.+..-.|++++...++.+..++..+.++..-.+.
T Consensus 4 ~eL~~~~~~l~~~l~~l~~~i~~l~~~~~e~~~~~~~ 40 (133)
T d1fxkc_ 4 AEIVAQLNIYQSQVELIQQQMEAVRATISELEILEKT 40 (133)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3466677778888888888888888888766654443
No 23
>d1ab4a_ e.11.1.1 (A:) DNA Gyrase A {Escherichia coli [TaxId: 562]}
Probab=23.45 E-value=2.2e+02 Score=24.64 Aligned_cols=44 Identities=25% Similarity=0.342 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHH
Q 025912 134 DIEKLCVIKQEMIKDLNEINGDLAKARDESKDMAAIKAEIETERQEI 180 (246)
Q Consensus 134 e~q~L~a~RQELs~qvq~ltqeL~r~~~d~qqip~l~aEid~lrqEl 180 (246)
|+.+|....++|..++..|.+=| .++....-.++.|++.+...+
T Consensus 441 e~~kL~~E~~~l~~ei~eL~~iL---~s~~~l~~~i~~EL~~lk~kf 484 (493)
T d1ab4a_ 441 EHEKLLDEYKELLDQIAELLRIL---GSADRLMEVIREELELVREQF 484 (493)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH---HCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHh
Confidence 55555555555555554444322 233334445566666666554
No 24
>d2efka1 a.238.1.4 (A:10-288) CDC42-interacting protein 4, CIP4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.55 E-value=1.5e+02 Score=21.96 Aligned_cols=12 Identities=17% Similarity=0.263 Sum_probs=5.6
Q ss_pred hhHHHHHHHHHH
Q 025912 165 DMAAIKAEIETE 176 (246)
Q Consensus 165 qip~l~aEid~l 176 (246)
.+|.+-..++.+
T Consensus 199 ~~p~~l~~lq~~ 210 (279)
T d2efka1 199 QMPQIFDKLQDM 210 (279)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 345554444443
No 25
>d2azeb1 e.63.1.2 (B:201-301) Transcription factor E2F1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.96 E-value=87 Score=22.24 Aligned_cols=34 Identities=18% Similarity=0.211 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 025912 128 LDRVRADIEKLCVIKQEMIKDLNEINGDLAKARD 161 (246)
Q Consensus 128 l~Q~r~e~q~L~a~RQELs~qvq~ltqeL~r~~~ 161 (246)
++++++|+..|...-++|-..++.+++.|.-...
T Consensus 3 ~~~L~~El~~L~~~E~~LD~li~~~~~~L~~lte 36 (101)
T d2azeb1 3 LEGLTQDLRQLQESEQQLDHLMNICTTQLRLLSE 36 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 4677888888888888888888888777776653
Done!