BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025913
(246 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 73/146 (50%), Gaps = 22/146 (15%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLR---------------- 160
+N+Y +IG GSYG V L + D +YA+K K L +
Sbjct: 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPG 71
Query: 161 --VAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYV-EGKWDNDGF 217
+ P + V +E+ I+K L HPN+V L+EV+DDPN DH YMV E V +G
Sbjct: 72 GCIQP-RGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT 130
Query: 218 GQPGAIGESMARKYLRDIVSGLMYLH 243
+P + E AR Y +D++ G+ YLH
Sbjct: 131 LKP--LSEDQARFYFQDLIKGIEYLH 154
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 77.0 bits (188), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 66/127 (51%), Gaps = 9/127 (7%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
I Y ++ IG G++ KV L R L G+ AIK K+ L+ T++ + REV
Sbjct: 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNP-------TSLQKLFREVR 66
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
IMK+L HPNIV L EVI+ + Y+++EY G D G + E AR R IV
Sbjct: 67 IMKILNHPNIVKLFEVIETEKT--LYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIV 124
Query: 237 SGLMYLH 243
S + Y H
Sbjct: 125 SAVQYCH 131
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 66/127 (51%), Gaps = 9/127 (7%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
I Y ++ IG G++ KV L R L G+ AIK K+ L+ T++ + REV
Sbjct: 11 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNP-------TSLQKLFREVR 63
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
IMK+L HPNIV L EVI+ + Y+++EY G D G + E AR R IV
Sbjct: 64 IMKILNHPNIVKLFEVIETEKT--LYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIV 121
Query: 237 SGLMYLH 243
S + Y H
Sbjct: 122 SAVQYCH 128
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 66/127 (51%), Gaps = 9/127 (7%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
I Y ++ IG G++ KV L R L GK A+K K+ L+ +++ + REV
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLN-------SSSLQKLFREVR 65
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
IMK+L HPNIV L EVI+ + Y+V+EY G D G + E AR R IV
Sbjct: 66 IMKVLNHPNIVKLFEVIETEKT--LYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIV 123
Query: 237 SGLMYLH 243
S + Y H
Sbjct: 124 SAVQYCH 130
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 66/127 (51%), Gaps = 9/127 (7%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
I Y ++ IG G++ KV L R L GK A+K K+ L+ +++ + REV
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLN-------SSSLQKLFREVR 65
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
IMK+L HPNIV L EVI+ + Y+V+EY G D G + E AR R IV
Sbjct: 66 IMKVLNHPNIVKLFEVIETEKT--LYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIV 123
Query: 237 SGLMYLH 243
S + Y H
Sbjct: 124 SAVQYCH 130
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 66/127 (51%), Gaps = 9/127 (7%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
I Y ++ IG G++ KV L R L GK A+K K+ L+ +++ + REV
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLN-------SSSLQKLFREVR 65
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
IMK+L HPNIV L EVI+ + Y+V+EY G D G + E AR R IV
Sbjct: 66 IMKVLNHPNIVKLFEVIETEKT--LYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIV 123
Query: 237 SGLMYLH 243
S + Y H
Sbjct: 124 SAVQYCH 130
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 70/141 (49%), Gaps = 11/141 (7%)
Query: 103 NKLIRSEDENGTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVA 162
N + + DE I Y + IG G++ KV L R L G+ A+K K+ L+
Sbjct: 2 NSITSATDEQ--PHIGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNP---- 55
Query: 163 PSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGA 222
T++ + REV IMK+L HPNIV L EVI+ + Y+V+EY G D G
Sbjct: 56 ---TSLQKLFREVRIMKILNHPNIVKLFEVIETEKT--LYLVMEYASGGEVFDYLVAHGR 110
Query: 223 IGESMARKYLRDIVSGLMYLH 243
+ E AR R IVS + Y H
Sbjct: 111 MKEKEARAKFRQIVSAVQYCH 131
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 66/127 (51%), Gaps = 9/127 (7%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
I Y ++ IG G++ KV L R L GK A+K K+ L+ +++ + REV
Sbjct: 6 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLN-------SSSLQKLFREVR 58
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
IMK+L HPNIV L EVI+ + Y+V+EY G D G + E AR R IV
Sbjct: 59 IMKVLNHPNIVKLFEVIETEKT--LYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIV 116
Query: 237 SGLMYLH 243
S + Y H
Sbjct: 117 SAVQYCH 123
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 66/127 (51%), Gaps = 9/127 (7%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
I Y ++ IG G++ KV L R L GK A++ K+ L+ +++ + REV
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLN-------SSSLQKLFREVR 65
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
IMK+L HPNIV L EVI+ + Y+V+EY G D G + E AR R IV
Sbjct: 66 IMKVLNHPNIVKLFEVIETEKT--LYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIV 123
Query: 237 SGLMYLH 243
S + Y H
Sbjct: 124 SAVQYCH 130
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 66/127 (51%), Gaps = 9/127 (7%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
I Y ++ IG G++ KV L R L GK A++ K+ L+ +++ + REV
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLN-------SSSLQKLFREVR 65
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
IMK+L HPNIV L EVI+ + Y+V+EY G D G + E AR R IV
Sbjct: 66 IMKVLNHPNIVKLFEVIETEKT--LYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIV 123
Query: 237 SGLMYLH 243
S + Y H
Sbjct: 124 SAVQYCH 130
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 66/130 (50%), Gaps = 6/130 (4%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPS----ETAMTDVRREV 175
Y VRK+G+G+YG+V+L + AIK KS K R + E ++ E+
Sbjct: 38 YFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEI 97
Query: 176 LIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++K L HPNI+ L +V +D +FY+V E+ EG + E A ++ I
Sbjct: 98 SLLKSLDHPNIIKLFDVFEDKK--YFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQI 155
Query: 236 VSGLMYLHGH 245
+SG+ YLH H
Sbjct: 156 LSGICYLHKH 165
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 63/127 (49%), Gaps = 9/127 (7%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
I Y ++ IG G++ KV L R L GK A+K K+ L+ +++ + REV
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLN-------SSSLQKLFREVR 65
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
I K+L HPNIV L EVI+ + Y+V EY G D G E AR R IV
Sbjct: 66 IXKVLNHPNIVKLFEVIETEKT--LYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIV 123
Query: 237 SGLMYLH 243
S + Y H
Sbjct: 124 SAVQYCH 130
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 73/138 (52%), Gaps = 8/138 (5%)
Query: 109 EDENGTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAM 168
+ +G I Y+ +G G++GKV + + L G A+K ++ + L V +
Sbjct: 7 QKHDGRVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDV------V 60
Query: 169 TDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMA 228
+RRE+ +K+ +HP+I+ L +VI P+ +MV+EYV G D + G + E +
Sbjct: 61 GKIRREIQNLKLFRHPHIIKLYQVISTPSD--IFMVMEYVSGGELFDYICKNGRLDEKES 118
Query: 229 RKYLRDIVSGLMYLHGHV 246
R+ + I+SG+ Y H H+
Sbjct: 119 RRLFQQILSGVDYCHRHM 136
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 70/135 (51%), Gaps = 8/135 (5%)
Query: 112 NGTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDV 171
+G I YV +G G++GKV + L G A+K ++ + L V + +
Sbjct: 5 DGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDV------VGKI 58
Query: 172 RREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKY 231
+RE+ +K+ +HP+I+ L +VI P F+MV+EYV G D + G + E AR+
Sbjct: 59 KREIQNLKLFRHPHIIKLYQVISTPTD--FFMVMEYVSGGELFDYICKHGRVEEMEARRL 116
Query: 232 LRDIVSGLMYLHGHV 246
+ I+S + Y H H+
Sbjct: 117 FQQILSAVDYCHRHM 131
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 70/135 (51%), Gaps = 8/135 (5%)
Query: 112 NGTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDV 171
+G I YV +G G++GKV + L G A+K ++ + L V + +
Sbjct: 5 DGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDV------VGKI 58
Query: 172 RREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKY 231
+RE+ +K+ +HP+I+ L +VI P F+MV+EYV G D + G + E AR+
Sbjct: 59 KREIQNLKLFRHPHIIKLYQVISTPTD--FFMVMEYVSGGELFDYICKHGRVEEMEARRL 116
Query: 232 LRDIVSGLMYLHGHV 246
+ I+S + Y H H+
Sbjct: 117 FQQILSAVDYCHRHM 131
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 66/128 (51%), Gaps = 8/128 (6%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
+ Y V+K+G+G+YG+V+L + L G AIK KS ++ + A+ D EV +
Sbjct: 4 DRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVT---TTSNSGALLD---EVAV 57
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVS 237
+K L HPNI+ L E +D ++Y+V+E G D E A ++ ++S
Sbjct: 58 LKQLDHPNIMKLYEFFEDKR--NYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLS 115
Query: 238 GLMYLHGH 245
G YLH H
Sbjct: 116 GTTYLHKH 123
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 66/128 (51%), Gaps = 8/128 (6%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
+ Y V+K+G+G+YG+V+L + L G AIK KS ++ + A+ D EV +
Sbjct: 21 DRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVT---TTSNSGALLD---EVAV 74
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVS 237
+K L HPNI+ L E +D ++Y+V+E G D E A ++ ++S
Sbjct: 75 LKQLDHPNIMKLYEFFEDKR--NYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLS 132
Query: 238 GLMYLHGH 245
G YLH H
Sbjct: 133 GTTYLHKH 140
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 55/94 (58%), Gaps = 9/94 (9%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
+ +YV ++KIG GS+GK +L +S+ DG+ Y IK + S + S + RREV
Sbjct: 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRM-------SSKEREESRREVA 75
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEG 210
++ ++HPNIV E ++ S Y+V++Y EG
Sbjct: 76 VLANMKHPNIVQYRESFEENGS--LYIVMDYCEG 107
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 67/126 (53%), Gaps = 9/126 (7%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y V+K+G+G+YG+V+L R + AIK K+ +S ++ + + EV ++K
Sbjct: 39 YQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVST-------SSNSKLLEEVAVLK 91
Query: 180 MLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGL 239
+L HPNI+ L + +D ++Y+V+E +G D E A ++ ++SG+
Sbjct: 92 LLDHPNIMKLYDFFEDKR--NYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGV 149
Query: 240 MYLHGH 245
YLH H
Sbjct: 150 TYLHKH 155
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 62/126 (49%), Gaps = 8/126 (6%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
+ Y R +G GS+G+V+L + + G+ A+K K R +T + REV +
Sbjct: 49 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISK------RQVKQKTDKESLLREVQL 102
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVS 237
+K L HPNI+ L E +D +FY+V E G D E A + +R ++S
Sbjct: 103 LKQLDHPNIMKLYEFFEDKG--YFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLS 160
Query: 238 GLMYLH 243
G+ Y+H
Sbjct: 161 GITYMH 166
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 62/126 (49%), Gaps = 8/126 (6%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
+ Y R +G GS+G+V+L + + G+ A+K K R +T + REV +
Sbjct: 50 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISK------RQVKQKTDKESLLREVQL 103
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVS 237
+K L HPNI+ L E +D +FY+V E G D E A + +R ++S
Sbjct: 104 LKQLDHPNIMKLYEFFEDKG--YFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLS 161
Query: 238 GLMYLH 243
G+ Y+H
Sbjct: 162 GITYMH 167
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 66/129 (51%), Gaps = 9/129 (6%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
I Y V+ +G GS+GKV L + G+ A+K +K L+K + RE+
Sbjct: 13 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAK------SDMQGRIEREIS 66
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
+++L+HP+I+ L +VI + D MV+EY G D Q + E AR++ + I+
Sbjct: 67 YLRLLRHPHIIKLYDVIK--SKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQII 123
Query: 237 SGLMYLHGH 245
S + Y H H
Sbjct: 124 SAVEYCHRH 132
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 62/126 (49%), Gaps = 8/126 (6%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
+ Y R +G GS+G+V+L + + G+ A+K K R +T + REV +
Sbjct: 26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISK------RQVKQKTDKESLLREVQL 79
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVS 237
+K L HPNI+ L E +D +FY+V E G D E A + +R ++S
Sbjct: 80 LKQLDHPNIMKLYEFFEDKG--YFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLS 137
Query: 238 GLMYLH 243
G+ Y+H
Sbjct: 138 GITYMH 143
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 66/129 (51%), Gaps = 9/129 (6%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
I Y V+ +G GS+GKV L + G+ A+K +K L+K + RE+
Sbjct: 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAK------SDMQGRIEREIS 65
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
+++L+HP+I+ L +VI + D MV+EY G D Q + E AR++ + I+
Sbjct: 66 YLRLLRHPHIIKLYDVIK--SKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQII 122
Query: 237 SGLMYLHGH 245
S + Y H H
Sbjct: 123 SAVEYCHRH 131
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 62/126 (49%), Gaps = 8/126 (6%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
+ Y R +G GS+G+V+L + + G+ A+K K R +T + REV +
Sbjct: 32 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISK------RQVKQKTDKESLLREVQL 85
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVS 237
+K L HPNI+ L E +D +FY+V E G D E A + +R ++S
Sbjct: 86 LKQLDHPNIMKLYEFFEDKG--YFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLS 143
Query: 238 GLMYLH 243
G+ Y+H
Sbjct: 144 GITYMH 149
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 66/129 (51%), Gaps = 9/129 (6%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
I Y V+ +G GS+GKV L + G+ A+K +K L+K + RE+
Sbjct: 3 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAK------SDMQGRIEREIS 56
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
+++L+HP+I+ L +VI + D MV+EY G D Q + E AR++ + I+
Sbjct: 57 YLRLLRHPHIIKLYDVIK--SKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQII 113
Query: 237 SGLMYLHGH 245
S + Y H H
Sbjct: 114 SAVEYCHRH 122
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 66/129 (51%), Gaps = 9/129 (6%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
I Y V+ +G GS+GKV L + G+ A+K +K L+K + RE+
Sbjct: 7 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAK------SDMQGRIEREIS 60
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
+++L+HP+I+ L +VI + D MV+EY G D Q + E AR++ + I+
Sbjct: 61 YLRLLRHPHIIKLYDVIK--SKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQII 117
Query: 237 SGLMYLHGH 245
S + Y H H
Sbjct: 118 SAVEYCHRH 126
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 63/120 (52%), Gaps = 9/120 (7%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
+G GS+G+V+ + + + YA+K +K+ + + + REV ++K L HPN
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKA-------SAKNKDTSTILREVELLKKLDHPN 82
Query: 186 IVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGH 245
I+ L E+++D +S FY+V E G D + E A + ++ + SG+ Y+H H
Sbjct: 83 IMKLFEILEDSSS--FYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH 140
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 70/129 (54%), Gaps = 9/129 (6%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
+ +Y ++ +G GSYG V+ R+ G+ AIK F +S K+ + AM RE+
Sbjct: 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMV---KKIAM----REIK 76
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
++K L+H N+VNL+EV +Y+V E+V+ +D P + + +KYL I+
Sbjct: 77 LLKQLRHENLVNLLEVCK--KKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQII 134
Query: 237 SGLMYLHGH 245
+G+ + H H
Sbjct: 135 NGIGFCHSH 143
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 63/120 (52%), Gaps = 9/120 (7%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
+G GS+G+V+ + + + YA+K +K+ + + + REV ++K L HPN
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKA-------SAKNKDTSTILREVELLKKLDHPN 82
Query: 186 IVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGH 245
I+ L E+++D +S FY+V E G D + E A + ++ + SG+ Y+H H
Sbjct: 83 IMKLFEILEDSSS--FYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH 140
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 63/120 (52%), Gaps = 9/120 (7%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
+G GS+G+V+ + + + YA+K +K+ + + + REV ++K L HPN
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKA-------SAKNKDTSTILREVELLKKLDHPN 82
Query: 186 IVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGH 245
I+ L E+++D +S FY+V E G D + E A + ++ + SG+ Y+H H
Sbjct: 83 IMKLFEILEDSSS--FYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH 140
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 59/120 (49%), Gaps = 5/120 (4%)
Query: 125 KIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHP 184
++G+G + V R G YA K K R S D+ REV I+K +QHP
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRE---DIEREVSILKEIQHP 74
Query: 185 NIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHG 244
N++ L EV + N ++LE V G D + ++ E A ++L+ I++G+ YLH
Sbjct: 75 NVITLHEVYE--NKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 59/120 (49%), Gaps = 5/120 (4%)
Query: 125 KIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHP 184
++G+G + V R G YA K K R S D+ REV I+K +QHP
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRE---DIEREVSILKEIQHP 74
Query: 185 NIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHG 244
N++ L EV + N ++LE V G D + ++ E A ++L+ I++G+ YLH
Sbjct: 75 NVITLHEVYE--NKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 60/126 (47%), Gaps = 8/126 (6%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
+ Y R +G GS+G+V+L + + G+ A+K K R +T + REV +
Sbjct: 26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISK------RQVKQKTDKESLLREVQL 79
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVS 237
+K L HPNI L E +D +FY+V E G D E A + +R ++S
Sbjct: 80 LKQLDHPNIXKLYEFFEDKG--YFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLS 137
Query: 238 GLMYLH 243
G+ Y H
Sbjct: 138 GITYXH 143
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 59/120 (49%), Gaps = 5/120 (4%)
Query: 125 KIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHP 184
++G+G + V R G YA K K R S D+ REV I+K +QHP
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRE---DIEREVSILKEIQHP 74
Query: 185 NIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHG 244
N++ L EV + N ++LE V G D + ++ E A ++L+ I++G+ YLH
Sbjct: 75 NVITLHEVYE--NKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 59/120 (49%), Gaps = 5/120 (4%)
Query: 125 KIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHP 184
++G+G + V R G YA K K R S D+ REV I+K +QHP
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRE---DIEREVSILKEIQHP 74
Query: 185 NIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHG 244
N++ L EV + N ++LE V G D + ++ E A ++L+ I++G+ YLH
Sbjct: 75 NVITLHEVYE--NKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 59/120 (49%), Gaps = 5/120 (4%)
Query: 125 KIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHP 184
++G+G + V R G YA K K R S D+ REV I+K +QHP
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRE---DIEREVSILKEIQHP 74
Query: 185 NIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHG 244
N++ L EV + N ++LE V G D + ++ E A ++L+ I++G+ YLH
Sbjct: 75 NVITLHEVYE--NKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 59/120 (49%), Gaps = 5/120 (4%)
Query: 125 KIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHP 184
++G+G + V R G YA K K R S D+ REV I+K +QHP
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRE---DIEREVSILKEIQHP 74
Query: 185 NIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHG 244
N++ L EV + N ++LE V G D + ++ E A ++L+ I++G+ YLH
Sbjct: 75 NVITLHEVYE--NKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 59/120 (49%), Gaps = 5/120 (4%)
Query: 125 KIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHP 184
++G+G + V R G YA K K R S D+ REV I+K +QHP
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRE---DIEREVSILKEIQHP 74
Query: 185 NIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHG 244
N++ L EV + N ++LE V G D + ++ E A ++L+ I++G+ YLH
Sbjct: 75 NVITLHEVYE--NKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 59/120 (49%), Gaps = 5/120 (4%)
Query: 125 KIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHP 184
++G+G + V R G YA K K R S D+ REV I+K +QHP
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRE---DIEREVSILKEIQHP 74
Query: 185 NIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHG 244
N++ L EV + N ++LE V G D + ++ E A ++L+ I++G+ YLH
Sbjct: 75 NVITLHEVYE--NKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 59/120 (49%), Gaps = 5/120 (4%)
Query: 125 KIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHP 184
++G+G + V R G YA K K R S D+ REV I+K +QHP
Sbjct: 17 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRE---DIEREVSILKEIQHP 73
Query: 185 NIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHG 244
N++ L EV + N ++LE V G D + ++ E A ++L+ I++G+ YLH
Sbjct: 74 NVITLHEVYE--NKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 131
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 59/120 (49%), Gaps = 5/120 (4%)
Query: 125 KIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHP 184
++G+G + V R G YA K K R S D+ REV I+K +QHP
Sbjct: 17 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRE---DIEREVSILKEIQHP 73
Query: 185 NIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHG 244
N++ L EV + N ++LE V G D + ++ E A ++L+ I++G+ YLH
Sbjct: 74 NVITLHEVYE--NKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 131
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 59/120 (49%), Gaps = 5/120 (4%)
Query: 125 KIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHP 184
++G+G + V R G YA K K R S D+ REV I+K +QHP
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRE---DIEREVSILKEIQHP 74
Query: 185 NIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHG 244
N++ L EV + N ++LE V G D + ++ E A ++L+ I++G+ YLH
Sbjct: 75 NVITLHEVYE--NKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 61/120 (50%), Gaps = 5/120 (4%)
Query: 125 KIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHP 184
++G+G + V R GK YA K K LS R S ++ REV I++ ++HP
Sbjct: 12 ELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSRE---EIEREVNILREIRHP 68
Query: 185 NIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHG 244
NI+ L ++ + N ++LE V G D + ++ E A ++L+ I+ G+ YLH
Sbjct: 69 NIITLHDIFE--NKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHS 126
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 59/120 (49%), Gaps = 5/120 (4%)
Query: 125 KIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHP 184
++G+G + V R G YA K K R S D+ REV I+K +QHP
Sbjct: 18 ELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRE---DIEREVSILKEIQHP 74
Query: 185 NIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHG 244
N++ L EV + N ++LE V G D + ++ E A ++L+ I++G+ YLH
Sbjct: 75 NVITLHEVYE--NKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 61/120 (50%), Gaps = 5/120 (4%)
Query: 125 KIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHP 184
++G+G + V R GK YA K K LS R S ++ REV I++ ++HP
Sbjct: 19 ELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSRE---EIEREVNILREIRHP 75
Query: 185 NIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHG 244
NI+ L ++ + N ++LE V G D + ++ E A ++L+ I+ G+ YLH
Sbjct: 76 NIITLHDIFE--NKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHS 133
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 59/120 (49%), Gaps = 5/120 (4%)
Query: 125 KIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHP 184
++G+G + V R G YA K K R S D+ REV I+K +QHP
Sbjct: 18 ELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRE---DIEREVSILKEIQHP 74
Query: 185 NIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHG 244
N++ L EV + N ++LE V G D + ++ E A ++L+ I++G+ YLH
Sbjct: 75 NVITLHEVYE--NKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 67/137 (48%), Gaps = 16/137 (11%)
Query: 113 GTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRV-APSETAMTDV 171
G + + V KIG G+YG V R+ L G+ A+K K+R+ +E +
Sbjct: 1 GPGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--------KIRLDTETEGVPSTA 52
Query: 172 RREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGA---IGESMA 228
RE+ ++K L HPNIV L++VI N Y+V E+V+ D F A I +
Sbjct: 53 IREISLLKELNHPNIVKLLDVIHTENK--LYLVFEHVDQ--DLKKFMDASALTGIPLPLI 108
Query: 229 RKYLRDIVSGLMYLHGH 245
+ YL ++ GL + H H
Sbjct: 109 KSYLFQLLQGLAFCHSH 125
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 60/119 (50%), Gaps = 5/119 (4%)
Query: 125 KIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHP 184
++G+G + V R GK YA K K L R S ++ REV I++ ++HP
Sbjct: 33 ELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSRE---EIEREVNILREIRHP 89
Query: 185 NIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
NI+ L ++ + N ++LE V G D + ++ E A ++L+ I+ G+ YLH
Sbjct: 90 NIITLHDIFE--NKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLH 146
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 59/127 (46%), Gaps = 12/127 (9%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
+ Y V+ IG+G++G L R + A+K + E +V+RE++
Sbjct: 19 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERG----------EKIAANVKREIIN 68
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVS 237
+ L+HPNIV EVI P H +V+EY G + G E AR + + ++S
Sbjct: 69 HRSLRHPNIVRFKEVILTPT--HLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS 126
Query: 238 GLMYLHG 244
G+ Y H
Sbjct: 127 GVSYCHA 133
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 66/137 (48%), Gaps = 16/137 (11%)
Query: 113 GTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRV-APSETAMTDV 171
G + + V KIG G+YG V R+ L G+ A+K K+R+ +E +
Sbjct: 1 GPGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--------KIRLDTETEGVPSTA 52
Query: 172 RREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGA---IGESMA 228
RE+ ++K L HPNIV L++VI N Y+V E++ D F A I +
Sbjct: 53 IREISLLKELNHPNIVKLLDVIHTENK--LYLVFEFLHQ--DLKTFMDASALTGIPLPLI 108
Query: 229 RKYLRDIVSGLMYLHGH 245
+ YL ++ GL + H H
Sbjct: 109 KSYLFQLLQGLAFCHSH 125
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 63/127 (49%), Gaps = 16/127 (12%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRV-APSETAMTDVRREVLIMKML 181
V KIG G+YG V R+ L G+ A+K K+R+ +E + RE+ ++K L
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALK--------KIRLDTETEGVPSTAIREISLLKEL 58
Query: 182 QHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGA---IGESMARKYLRDIVSG 238
HPNIV L++VI N Y+V E+V D F A I + + YL ++ G
Sbjct: 59 NHPNIVKLLDVIHTENK--LYLVFEHVHQ--DLKTFMDASALTGIPLPLIKSYLFQLLQG 114
Query: 239 LMYLHGH 245
L + H H
Sbjct: 115 LAFCHSH 121
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 66/137 (48%), Gaps = 16/137 (11%)
Query: 113 GTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRV-APSETAMTDV 171
G + + V KIG G+YG V R+ L G+ A+K K+R+ +E +
Sbjct: 1 GPGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--------KIRLDTETEGVPSTA 52
Query: 172 RREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGA---IGESMA 228
RE+ ++K L HPNIV L++VI N Y+V E++ D F A I +
Sbjct: 53 IREISLLKELNHPNIVKLLDVIHTENK--LYLVFEFLHQ--DLKKFMDASALTGIPLPLI 108
Query: 229 RKYLRDIVSGLMYLHGH 245
+ YL ++ GL + H H
Sbjct: 109 KSYLFQLLQGLAFCHSH 125
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 63/130 (48%), Gaps = 8/130 (6%)
Query: 114 TKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRR 173
T ++++ ++ +G GS+G+V+L + G HYA+K K + KL+ E + + R
Sbjct: 37 TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI--EHTLNEKR- 93
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLR 233
I++ + P +V L D + + YMV+EYV G + G E AR Y
Sbjct: 94 ---ILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAA 148
Query: 234 DIVSGLMYLH 243
IV YLH
Sbjct: 149 QIVLTFEYLH 158
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 66/135 (48%), Gaps = 16/135 (11%)
Query: 115 KMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRV-APSETAMTDVRR 173
+ + + V KIG G+YG V R+ L G+ A+K K+R+ +E + R
Sbjct: 7 EFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--------KIRLDTETEGVPSTAIR 58
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGA---IGESMARK 230
E+ ++K L HPNIV L++VI N Y+V E++ D F A I + +
Sbjct: 59 EISLLKELNHPNIVKLLDVIHTENK--LYLVFEFLHQ--DLKKFMDASALTGIPLPLIKS 114
Query: 231 YLRDIVSGLMYLHGH 245
YL ++ GL + H H
Sbjct: 115 YLFQLLQGLAFCHSH 129
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 65/133 (48%), Gaps = 16/133 (12%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRV-APSETAMTDVRREV 175
+ + V KIG G+YG V R+ L G+ A+K K+R+ +E + RE+
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--------KIRLDTETEGVPSTAIREI 53
Query: 176 LIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGA---IGESMARKYL 232
++K L HPNIV L++VI N Y+V E++ D F A I + + YL
Sbjct: 54 SLLKELNHPNIVKLLDVIHTENK--LYLVFEFLHQ--DLKKFMDASALTGIPLPLIKSYL 109
Query: 233 RDIVSGLMYLHGH 245
++ GL + H H
Sbjct: 110 FQLLQGLAFCHSH 122
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 61/130 (46%), Gaps = 8/130 (6%)
Query: 114 TKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRR 173
T ++++ ++ +G GS+G+V+L + G HYA+K K + KL+ +
Sbjct: 37 TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLK------QIEHTLN 90
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLR 233
E I++ + P +V L D + + YMV+EYV G + G E AR Y
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 234 DIVSGLMYLH 243
IV YLH
Sbjct: 149 QIVLTFEYLH 158
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 63/131 (48%), Gaps = 8/131 (6%)
Query: 114 TKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRR 173
T ++++ ++ +G GS+G+V+L + G HYA+K K + KL+ E + + R
Sbjct: 37 TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI--EHTLNEKR- 93
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLR 233
I++ + P +V L D + + YMV+EYV G + G E AR Y
Sbjct: 94 ---ILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 234 DIVSGLMYLHG 244
IV YLH
Sbjct: 149 QIVLTFEYLHS 159
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 63/131 (48%), Gaps = 8/131 (6%)
Query: 114 TKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRR 173
T ++++ ++ +G GS+G+V+L + G HYA+K K + KL+ E + + R
Sbjct: 38 TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI--EHTLNEKR- 94
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLR 233
I++ + P +V L D + + YMV+EYV G + G E AR Y
Sbjct: 95 ---ILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 149
Query: 234 DIVSGLMYLHG 244
IV YLH
Sbjct: 150 QIVLTFEYLHS 160
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 61/130 (46%), Gaps = 8/130 (6%)
Query: 114 TKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRR 173
T ++++ ++ +G GS+G+V+L + G HYA+K K + KL+ +
Sbjct: 37 TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLK------QIEHTLN 90
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLR 233
E I++ + P +V L D + + YMV+EYV G + G E AR Y
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 234 DIVSGLMYLH 243
IV YLH
Sbjct: 149 QIVLTFEYLH 158
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 66/135 (48%), Gaps = 16/135 (11%)
Query: 115 KMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRV-APSETAMTDVRR 173
+ + + V KIG G+YG V R+ L G+ A+K K+R+ +E + R
Sbjct: 7 EFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--------KIRLDTETEGVPSTAIR 58
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGA---IGESMARK 230
E+ ++K L HPNIV L++VI N Y+V E++ D F A I + +
Sbjct: 59 EISLLKELNHPNIVKLLDVIHTENK--LYLVFEFLHQ--DLKKFMDASALTGIPLPLIKS 114
Query: 231 YLRDIVSGLMYLHGH 245
YL ++ GL + H H
Sbjct: 115 YLFQLLQGLAFCHSH 129
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 68/152 (44%), Gaps = 10/152 (6%)
Query: 94 CRQFPVKESNKLIRSED--ENGTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAF 151
++F K ++ + T ++++ ++ +G GS+G+V+L + G HYA+K
Sbjct: 36 VKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL 95
Query: 152 HKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGK 211
K + KL+ + E I++ + P +V L D + + YMV+EYV G
Sbjct: 96 DKQKVVKLK------QIEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVAGG 147
Query: 212 WDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
+ G E AR Y IV YLH
Sbjct: 148 EMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 179
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 8/131 (6%)
Query: 114 TKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRR 173
T ++++ ++ +G GS+G+V+L + G HYA+K K + KL+ +
Sbjct: 37 TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLK------QIEHTLN 90
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLR 233
E I++ + P +V L D + + YMV+EYV G + G E AR Y
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 234 DIVSGLMYLHG 244
IV YLH
Sbjct: 149 QIVLTFEYLHS 159
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 63/130 (48%), Gaps = 8/130 (6%)
Query: 114 TKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRR 173
T ++++ ++ +G GS+G+V+L + G HYA+K K + KL+ E + + R
Sbjct: 37 TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI--EHTLNEKR- 93
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLR 233
I++ + P +V L D + + YMV+EYV G + G E AR Y
Sbjct: 94 ---ILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 234 DIVSGLMYLH 243
IV YLH
Sbjct: 149 QIVLTFEYLH 158
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 63/127 (49%), Gaps = 16/127 (12%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRV-APSETAMTDVRREVLIMKML 181
V KIG G+YG V R+ L G+ A+K K+R+ +E + RE+ ++K L
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALK--------KIRLDTETEGVPSTAIREISLLKEL 59
Query: 182 QHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGA---IGESMARKYLRDIVSG 238
HPNIV L++VI N Y+V E++ D F A I + + YL ++ G
Sbjct: 60 NHPNIVKLLDVIHTENK--LYLVFEFLHQ--DLKDFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 239 LMYLHGH 245
L + H H
Sbjct: 116 LAFCHSH 122
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 63/127 (49%), Gaps = 16/127 (12%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRV-APSETAMTDVRREVLIMKML 181
V KIG G+YG V R+ L G+ A+K K+R+ +E + RE+ ++K L
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALK--------KIRLDTETEGVPSTAIREISLLKEL 59
Query: 182 QHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGA---IGESMARKYLRDIVSG 238
HPNIV L++VI N Y+V E++ D F A I + + YL ++ G
Sbjct: 60 NHPNIVKLLDVIHTENK--LYLVFEFLHQ--DLKKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 239 LMYLHGH 245
L + H H
Sbjct: 116 LAFCHSH 122
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 63/131 (48%), Gaps = 8/131 (6%)
Query: 114 TKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRR 173
T ++++ ++ +G GS+G+V+L + G HYA+K K + KL+ E + + R
Sbjct: 37 TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI--EHTLNEKR- 93
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLR 233
I++ + P +V L D + + YMV+EYV G + G E AR Y
Sbjct: 94 ---ILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 234 DIVSGLMYLHG 244
IV YLH
Sbjct: 149 QIVLTFEYLHS 159
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 63/127 (49%), Gaps = 16/127 (12%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRV-APSETAMTDVRREVLIMKML 181
V KIG G+YG V R+ L G+ A+K K+R+ +E + RE+ ++K L
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALK--------KIRLDTETEGVPSTAIREISLLKEL 58
Query: 182 QHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGA---IGESMARKYLRDIVSG 238
HPNIV L++VI N Y+V E++ D F A I + + YL ++ G
Sbjct: 59 NHPNIVKLLDVIHTENK--LYLVFEFLHQ--DLKKFMDASALTGIPLPLIKSYLFQLLQG 114
Query: 239 LMYLHGH 245
L + H H
Sbjct: 115 LAFCHSH 121
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 8/131 (6%)
Query: 114 TKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRR 173
T ++++ ++ +G GS+G+V+L + G HYA+K K + KL+ +
Sbjct: 37 TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLK------QIEHTLN 90
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLR 233
E I++ + P +V L D + + YMV+EYV G + G E AR Y
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 234 DIVSGLMYLHG 244
IV YLH
Sbjct: 149 QIVLTFEYLHS 159
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 63/127 (49%), Gaps = 16/127 (12%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRV-APSETAMTDVRREVLIMKML 181
V KIG G+YG V R+ L G+ A+K K+R+ +E + RE+ ++K L
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALK--------KIRLDTETEGVPSTAIREISLLKEL 58
Query: 182 QHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGA---IGESMARKYLRDIVSG 238
HPNIV L++VI N Y+V E++ D F A I + + YL ++ G
Sbjct: 59 NHPNIVKLLDVIHTENK--LYLVFEFLHQ--DLKKFMDASALTGIPLPLIKSYLFQLLQG 114
Query: 239 LMYLHGH 245
L + H H
Sbjct: 115 LAFCHSH 121
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 65/133 (48%), Gaps = 16/133 (12%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRV-APSETAMTDVRREV 175
+ + V KIG G+YG V R+ L G+ A+K K+R+ +E + RE+
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--------KIRLDTETEGVPSTAIREI 54
Query: 176 LIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGA---IGESMARKYL 232
++K L HPNIV L++VI N Y+V E++ D F A I + + YL
Sbjct: 55 SLLKELNHPNIVKLLDVIHTENK--LYLVFEFLHQ--DLKKFMDASALTGIPLPLIKSYL 110
Query: 233 RDIVSGLMYLHGH 245
++ GL + H H
Sbjct: 111 FQLLQGLAFCHSH 123
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 63/130 (48%), Gaps = 8/130 (6%)
Query: 114 TKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRR 173
T ++++ ++ +G GS+G+V+L + G HYA+K K + KL+ E + + R
Sbjct: 37 TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI--EHTLNEKR- 93
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLR 233
I++ + P +V L D + + YMV+EYV G + G E AR Y
Sbjct: 94 ---ILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 234 DIVSGLMYLH 243
IV YLH
Sbjct: 149 QIVLTFEYLH 158
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 63/127 (49%), Gaps = 16/127 (12%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRV-APSETAMTDVRREVLIMKML 181
V KIG G+YG V R+ L G+ A+K K+R+ +E + RE+ ++K L
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALK--------KIRLDTETEGVPSTAIREISLLKEL 59
Query: 182 QHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGA---IGESMARKYLRDIVSG 238
HPNIV L++VI N Y+V E++ D F A I + + YL ++ G
Sbjct: 60 NHPNIVKLLDVIHTENK--LYLVFEFLHQ--DLKKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 239 LMYLHGH 245
L + H H
Sbjct: 116 LAFCHSH 122
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 61/130 (46%), Gaps = 8/130 (6%)
Query: 114 TKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRR 173
T ++++ ++ +G GS+G+V+L + G HYA+K K + KL+ +
Sbjct: 37 TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLK------QIEHTLN 90
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLR 233
E I++ + P +V L D + + YMV+EYV G + G E AR Y
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 234 DIVSGLMYLH 243
IV YLH
Sbjct: 149 QIVLTFEYLH 158
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 63/127 (49%), Gaps = 16/127 (12%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRV-APSETAMTDVRREVLIMKML 181
V KIG G+YG V R+ L G+ A+K K+R+ +E + RE+ ++K L
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALK--------KIRLDTETEGVPSTAIREISLLKEL 60
Query: 182 QHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGA---IGESMARKYLRDIVSG 238
HPNIV L++VI N Y+V E++ D F A I + + YL ++ G
Sbjct: 61 NHPNIVKLLDVIHTENK--LYLVFEFLHQ--DLKKFMDASALTGIPLPLIKSYLFQLLQG 116
Query: 239 LMYLHGH 245
L + H H
Sbjct: 117 LAFCHSH 123
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 65/133 (48%), Gaps = 16/133 (12%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRV-APSETAMTDVRREV 175
+ + V KIG G+YG V R+ L G+ A+K K+R+ +E + RE+
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--------KIRLDTETEGVPSTAIREI 53
Query: 176 LIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGA---IGESMARKYL 232
++K L HPNIV L++VI N Y+V E++ D F A I + + YL
Sbjct: 54 SLLKELNHPNIVKLLDVIHTENK--LYLVFEFLHQ--DLKKFMDASALTGIPLPLIKSYL 109
Query: 233 RDIVSGLMYLHGH 245
++ GL + H H
Sbjct: 110 FQLLQGLAFCHSH 122
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 65/133 (48%), Gaps = 16/133 (12%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRV-APSETAMTDVRREV 175
+ + V KIG G+YG V R+ L G+ A+K K+R+ +E + RE+
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--------KIRLDTETEGVPSTAIREI 54
Query: 176 LIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGA---IGESMARKYL 232
++K L HPNIV L++VI N Y+V E++ D F A I + + YL
Sbjct: 55 SLLKELNHPNIVKLLDVIHTENK--LYLVFEFLHQ--DLKKFMDASALTGIPLPLIKSYL 110
Query: 233 RDIVSGLMYLHGH 245
++ GL + H H
Sbjct: 111 FQLLQGLAFCHSH 123
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 65/133 (48%), Gaps = 16/133 (12%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRV-APSETAMTDVRREV 175
+ + V KIG G+YG V R+ L G+ A+K K+R+ +E + RE+
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--------KIRLDTETEGVPSTAIREI 55
Query: 176 LIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGA---IGESMARKYL 232
++K L HPNIV L++VI N Y+V E++ D F A I + + YL
Sbjct: 56 SLLKELNHPNIVKLLDVIHTENK--LYLVFEFLHQ--DLKKFMDASALTGIPLPLIKSYL 111
Query: 233 RDIVSGLMYLHGH 245
++ GL + H H
Sbjct: 112 FQLLQGLAFCHSH 124
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 63/127 (49%), Gaps = 16/127 (12%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRV-APSETAMTDVRREVLIMKML 181
V KIG G+YG V R+ L G+ A+K K+R+ +E + RE+ ++K L
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALK--------KIRLDTETEGVPSTAIREISLLKEL 59
Query: 182 QHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGA---IGESMARKYLRDIVSG 238
HPNIV L++VI N Y+V E++ D F A I + + YL ++ G
Sbjct: 60 NHPNIVKLLDVIHTENK--LYLVFEFLHQ--DLKKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 239 LMYLHGH 245
L + H H
Sbjct: 116 LAFCHSH 122
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 63/127 (49%), Gaps = 16/127 (12%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRV-APSETAMTDVRREVLIMKML 181
V KIG G+YG V R+ L G+ A+K K+R+ +E + RE+ ++K L
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALK--------KIRLDTETEGVPSTAIREISLLKEL 58
Query: 182 QHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGA---IGESMARKYLRDIVSG 238
HPNIV L++VI N Y+V E++ D F A I + + YL ++ G
Sbjct: 59 NHPNIVKLLDVIHTENK--LYLVFEFLHQ--DLKKFMDASALTGIPLPLIKSYLFQLLQG 114
Query: 239 LMYLHGH 245
L + H H
Sbjct: 115 LAFCHSH 121
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 63/127 (49%), Gaps = 16/127 (12%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRV-APSETAMTDVRREVLIMKML 181
V KIG G+YG V R+ L G+ A+K K+R+ +E + RE+ ++K L
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALK--------KIRLDTETEGVPSTAIREISLLKEL 59
Query: 182 QHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGA---IGESMARKYLRDIVSG 238
HPNIV L++VI N Y+V E++ D F A I + + YL ++ G
Sbjct: 60 NHPNIVKLLDVIHTENK--LYLVFEFLHQ--DLKKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 239 LMYLHGH 245
L + H H
Sbjct: 116 LAFCHSH 122
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 63/127 (49%), Gaps = 16/127 (12%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRV-APSETAMTDVRREVLIMKML 181
V KIG G+YG V R+ L G+ A+K K+R+ +E + RE+ ++K L
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALK--------KIRLDTETEGVPSTAIREISLLKEL 58
Query: 182 QHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGA---IGESMARKYLRDIVSG 238
HPNIV L++VI N Y+V E++ D F A I + + YL ++ G
Sbjct: 59 NHPNIVKLLDVIHTENK--LYLVFEFLHQ--DLKKFMDASALTGIPLPLIKSYLFQLLQG 114
Query: 239 LMYLHGH 245
L + H H
Sbjct: 115 LAFCHSH 121
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 63/131 (48%), Gaps = 8/131 (6%)
Query: 114 TKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRR 173
T ++++ ++ +G GS+G+V+L + G HYA+K K + KL+ E + + R
Sbjct: 24 TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI--EHTLNEKR- 80
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLR 233
I++ + P +V L D + + YMV+EYV G + G E AR Y
Sbjct: 81 ---ILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 135
Query: 234 DIVSGLMYLHG 244
IV YLH
Sbjct: 136 QIVLTFEYLHS 146
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 65/133 (48%), Gaps = 16/133 (12%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRV-APSETAMTDVRREV 175
+ + V KIG G+YG V R+ L G+ A+K K+R+ +E + RE+
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--------KIRLDTETEGVPSTAIREI 56
Query: 176 LIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGA---IGESMARKYL 232
++K L HPNIV L++VI N Y+V E++ D F A I + + YL
Sbjct: 57 SLLKELNHPNIVKLLDVIHTENK--LYLVFEFLHQ--DLKKFMDASALTGIPLPLIKSYL 112
Query: 233 RDIVSGLMYLHGH 245
++ GL + H H
Sbjct: 113 FQLLQGLAFCHSH 125
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 65/133 (48%), Gaps = 16/133 (12%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRV-APSETAMTDVRREV 175
+ + V KIG G+YG V R+ L G+ A+K K+R+ +E + RE+
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--------KIRLDTETEGVPSTAIREI 55
Query: 176 LIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGA---IGESMARKYL 232
++K L HPNIV L++VI N Y+V E++ D F A I + + YL
Sbjct: 56 SLLKELNHPNIVKLLDVIHTENK--LYLVFEFLHQ--DLKKFMDASALTGIPLPLIKSYL 111
Query: 233 RDIVSGLMYLHGH 245
++ GL + H H
Sbjct: 112 FQLLQGLAFCHSH 124
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 63/127 (49%), Gaps = 16/127 (12%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRV-APSETAMTDVRREVLIMKML 181
V KIG G+YG V R+ L G+ A+K K+R+ +E + RE+ ++K L
Sbjct: 12 VEKIGEGTYGVVYKARNKLTGEVVALK--------KIRLDTETEGVPSTAIREISLLKEL 63
Query: 182 QHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGA---IGESMARKYLRDIVSG 238
HPNIV L++VI N Y+V E++ D F A I + + YL ++ G
Sbjct: 64 NHPNIVKLLDVIHTENK--LYLVFEFLHQ--DLKKFMDASALTGIPLPLIKSYLFQLLQG 119
Query: 239 LMYLHGH 245
L + H H
Sbjct: 120 LAFCHSH 126
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 61/130 (46%), Gaps = 8/130 (6%)
Query: 114 TKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRR 173
T ++++ ++ IG GS+G+V+L + G HYA+K K + KL+ +
Sbjct: 37 TAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLK------QIEHTLN 90
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLR 233
E I++ + P +V L D + + YMV+EYV G + G E AR Y
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 234 DIVSGLMYLH 243
IV YLH
Sbjct: 149 QIVLTFEYLH 158
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 63/130 (48%), Gaps = 8/130 (6%)
Query: 114 TKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRR 173
T ++++ ++ +G GS+G+V+L + G HYA+K K + KL+ E + + R
Sbjct: 37 TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI--EHTLNEKR- 93
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLR 233
I++ + P +V L D + + YMV+EYV G + G E AR Y
Sbjct: 94 ---ILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 234 DIVSGLMYLH 243
IV YLH
Sbjct: 149 QIVLTFEYLH 158
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 65/133 (48%), Gaps = 16/133 (12%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRV-APSETAMTDVRREV 175
+ + V KIG G+YG V R+ L G+ A+K K+R+ +E + RE+
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--------KIRLDTETEGVPSTAIREI 55
Query: 176 LIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGA---IGESMARKYL 232
++K L HPNIV L++VI N Y+V E++ D F A I + + YL
Sbjct: 56 SLLKELNHPNIVKLLDVIHTENK--LYLVFEFLHQ--DLKKFMDASALTGIPLPLIKSYL 111
Query: 233 RDIVSGLMYLHGH 245
++ GL + H H
Sbjct: 112 FQLLQGLAFCHSH 124
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 52/119 (43%), Gaps = 8/119 (6%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
+G GS+ VVL R + YAIK K H+ K E + V RE +M L HP
Sbjct: 17 LGEGSFSTVVLARELATSREYAIKILEKRHIIK------ENKVPYVTRERDVMSRLDHPF 70
Query: 186 IVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHG 244
V L D + Y L Y + + G+ E+ R Y +IVS L YLHG
Sbjct: 71 FVKLYFTFQD--DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 127
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 63/127 (49%), Gaps = 16/127 (12%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRV-APSETAMTDVRREVLIMKML 181
V KIG G+YG V R+ L G+ A+K K+R+ +E + RE+ ++K L
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALK--------KIRLDTETEGVPSTAIREISLLKEL 60
Query: 182 QHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGA---IGESMARKYLRDIVSG 238
HPNIV L++VI N Y+V E++ D F A I + + YL ++ G
Sbjct: 61 NHPNIVKLLDVIHTENK--LYLVFEFLHQ--DLKKFMDASALTGIPLPLIKSYLFQLLQG 116
Query: 239 LMYLHGH 245
L + H H
Sbjct: 117 LAFCHSH 123
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 52/119 (43%), Gaps = 8/119 (6%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
+G GS+ VVL R + YAIK K H+ K E + V RE +M L HP
Sbjct: 16 LGEGSFSTVVLARELATSREYAIKILEKRHIIK------ENKVPYVTRERDVMSRLDHPF 69
Query: 186 IVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHG 244
V L D + Y L Y + + G+ E+ R Y +IVS L YLHG
Sbjct: 70 FVKLYFTFQD--DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 126
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 63/127 (49%), Gaps = 16/127 (12%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRV-APSETAMTDVRREVLIMKML 181
V KIG G+YG V R+ L G+ A+K K+R+ +E + RE+ ++K L
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALK--------KIRLDTETEGVPSTAIREISLLKEL 59
Query: 182 QHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGA---IGESMARKYLRDIVSG 238
HPNIV L++VI N Y+V E++ D F A I + + YL ++ G
Sbjct: 60 NHPNIVKLLDVIHTENK--LYLVFEFLHQ--DLKKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 239 LMYLHGH 245
L + H H
Sbjct: 116 LAFCHSH 122
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 52/119 (43%), Gaps = 8/119 (6%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
+G GS+ VVL R + YAIK K H+ K E + V RE +M L HP
Sbjct: 15 LGEGSFSTVVLARELATSREYAIKILEKRHIIK------ENKVPYVTRERDVMSRLDHPF 68
Query: 186 IVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHG 244
V L D + Y L Y + + G+ E+ R Y +IVS L YLHG
Sbjct: 69 FVKLYFTFQD--DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 125
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 63/130 (48%), Gaps = 8/130 (6%)
Query: 114 TKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRR 173
T ++++ ++ +G GS+G+V+L + G HYA+K K + KL+ E + + R
Sbjct: 37 TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI--EHTLNEKR- 93
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLR 233
I++ + P +V L D + + YMV+EYV G + G E AR Y
Sbjct: 94 ---ILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 234 DIVSGLMYLH 243
IV YLH
Sbjct: 149 QIVLTFEYLH 158
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 52/119 (43%), Gaps = 8/119 (6%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
+G GS+ VVL R + YAIK K H+ K E + V RE +M L HP
Sbjct: 18 LGEGSFSTVVLARELATSREYAIKILEKRHIIK------ENKVPYVTRERDVMSRLDHPF 71
Query: 186 IVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHG 244
V L D + Y L Y + + G+ E+ R Y +IVS L YLHG
Sbjct: 72 FVKLYFTFQD--DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 128
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 65/133 (48%), Gaps = 16/133 (12%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRV-APSETAMTDVRREV 175
+ + V KIG G+YG V R+ L G+ A+K K+R+ +E + RE+
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--------KIRLDTETEGVPSTAIREI 55
Query: 176 LIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGA---IGESMARKYL 232
++K L HPNIV L++VI N Y+V E++ D F A I + + YL
Sbjct: 56 SLLKELNHPNIVKLLDVIHTENK--LYLVFEFLS--MDLKDFMDASALTGIPLPLIKSYL 111
Query: 233 RDIVSGLMYLHGH 245
++ GL + H H
Sbjct: 112 FQLLQGLAFCHSH 124
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 65/133 (48%), Gaps = 16/133 (12%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRV-APSETAMTDVRREV 175
+ + V KIG G+YG V R+ L G+ A+K K+R+ +E + RE+
Sbjct: 6 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--------KIRLDTETEGVPSTAIREI 57
Query: 176 LIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGA---IGESMARKYL 232
++K L HPNIV L++VI N Y+V E++ D F A I + + YL
Sbjct: 58 SLLKELNHPNIVKLLDVIHTENK--LYLVFEFLHQ--DLKKFMDASALTGIPLPLIKSYL 113
Query: 233 RDIVSGLMYLHGH 245
++ GL + H H
Sbjct: 114 FQLLQGLAFCHSH 126
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 65/133 (48%), Gaps = 16/133 (12%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRV-APSETAMTDVRREV 175
+ + V KIG G+YG V R+ L G+ A+K K+R+ +E + RE+
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--------KIRLDTETEGVPSTAIREI 56
Query: 176 LIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGA---IGESMARKYL 232
++K L HPNIV L++VI N Y+V E++ D F A I + + YL
Sbjct: 57 SLLKELNHPNIVKLLDVIHTENK--LYLVFEFLS--MDLKDFMDASALTGIPLPLIKSYL 112
Query: 233 RDIVSGLMYLHGH 245
++ GL + H H
Sbjct: 113 FQLLQGLAFCHSH 125
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 59/127 (46%), Gaps = 12/127 (9%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
+ Y V+ IGAG++G L R + A+K + E +V+RE++
Sbjct: 19 DRYELVKDIGAGNFGVARLMRDKQANELVAVKYIERG----------EKIDENVKREIIN 68
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVS 237
+ L+HPNIV EVI P H +V+EY G + G E AR + + ++S
Sbjct: 69 HRSLRHPNIVRFKEVILTPT--HLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS 126
Query: 238 GLMYLHG 244
G+ Y H
Sbjct: 127 GVSYAHA 133
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 65/133 (48%), Gaps = 16/133 (12%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRV-APSETAMTDVRREV 175
+ + V KIG G+YG V R+ L G+ A+K K+R+ +E + RE+
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--------KIRLDTETEGVPSTAIREI 54
Query: 176 LIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGA---IGESMARKYL 232
++K L HPNIV L++VI N Y+V E++ D F A I + + YL
Sbjct: 55 SLLKELNHPNIVKLLDVIHTENK--LYLVFEFLS--MDLKKFMDASALTGIPLPLIKSYL 110
Query: 233 RDIVSGLMYLHGH 245
++ GL + H H
Sbjct: 111 FQLLQGLAFCHSH 123
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 8/131 (6%)
Query: 114 TKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRR 173
T ++++ ++ +G GS+G+V+L + G HYA+K K + KL+ +
Sbjct: 37 TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLK------QIEHTLN 90
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLR 233
E I++ + P +V L D + + YMV+EYV G + G E AR Y
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAA 148
Query: 234 DIVSGLMYLHG 244
IV YLH
Sbjct: 149 QIVLTFEYLHS 159
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 65/133 (48%), Gaps = 16/133 (12%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRV-APSETAMTDVRREV 175
+ + V KIG G+YG V R+ L G+ A+K K+R+ +E + RE+
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--------KIRLDTETEGVPSTAIREI 56
Query: 176 LIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGA---IGESMARKYL 232
++K L HPNIV L++VI N Y+V E++ D F A I + + YL
Sbjct: 57 SLLKELNHPNIVKLLDVIHTENK--LYLVFEFLS--MDLKKFMDASALTGIPLPLIKSYL 112
Query: 233 RDIVSGLMYLHGH 245
++ GL + H H
Sbjct: 113 FQLLQGLAFCHSH 125
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 63/127 (49%), Gaps = 16/127 (12%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRV-APSETAMTDVRREVLIMKML 181
V KIG G+YG V R+ L G+ A+K K+R+ +E + RE+ ++K L
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALK--------KIRLDTETEGVPSTAIREISLLKEL 59
Query: 182 QHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGA---IGESMARKYLRDIVSG 238
HPNIV L++VI N Y+V E++ D F A I + + YL ++ G
Sbjct: 60 NHPNIVKLLDVIHTENK--LYLVFEFLHQ--DLKKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 239 LMYLHGH 245
L + H H
Sbjct: 116 LSFCHSH 122
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 63/131 (48%), Gaps = 8/131 (6%)
Query: 114 TKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRR 173
T ++++ ++ +G GS+G+V+L + G HYA+K K + KL+ E + + R
Sbjct: 32 TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI--EHTLNEKR- 88
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLR 233
I++ + P +V L D + + YMV+EYV G + G E AR Y
Sbjct: 89 ---ILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAA 143
Query: 234 DIVSGLMYLHG 244
IV YLH
Sbjct: 144 QIVLTFEYLHS 154
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 63/130 (48%), Gaps = 8/130 (6%)
Query: 114 TKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRR 173
T ++++ ++ +G GS+G+V+L + G HYA+K K + KL+ E + + R
Sbjct: 37 TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI--EHTLNEKR- 93
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLR 233
I++ + P +V L D + + YMV+EYV G + G E AR Y
Sbjct: 94 ---ILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAA 148
Query: 234 DIVSGLMYLH 243
IV YLH
Sbjct: 149 QIVLTFEYLH 158
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 61/130 (46%), Gaps = 8/130 (6%)
Query: 114 TKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRR 173
T ++++ ++ +G GS+G+V+L + G HYA+K K + KL+ +
Sbjct: 58 TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLK------QIEHTLN 111
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLR 233
E I++ + P +V L D + + YMV+EYV G + G E AR Y
Sbjct: 112 EKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAA 169
Query: 234 DIVSGLMYLH 243
IV YLH
Sbjct: 170 QIVLTFEYLH 179
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 52/119 (43%), Gaps = 8/119 (6%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
+G GS+ VVL R + YAIK K H+ K E + V RE +M L HP
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIK------ENKVPYVTRERDVMSRLDHPF 93
Query: 186 IVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHG 244
V L D + Y L Y + + G+ E+ R Y +IVS L YLHG
Sbjct: 94 FVKLYFTFQD--DEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 150
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 63/130 (48%), Gaps = 8/130 (6%)
Query: 114 TKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRR 173
T ++++ ++ +G GS+G+V+L + G HYA+K K + KL+ E + + R
Sbjct: 58 TAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQI--EHTLNEKR- 114
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLR 233
I++ + P +V L D + + YMV+EYV G + G E AR Y
Sbjct: 115 ---ILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 169
Query: 234 DIVSGLMYLH 243
IV YLH
Sbjct: 170 QIVLTFEYLH 179
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 63/130 (48%), Gaps = 8/130 (6%)
Query: 114 TKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRR 173
T ++++ ++ +G GS+G+V+L + G HYA+K K + KL+ E + + R
Sbjct: 37 TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI--EHTLNEKR- 93
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLR 233
I++ + P +V L D + + YMV+EYV G + G E AR Y
Sbjct: 94 ---ILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAA 148
Query: 234 DIVSGLMYLH 243
IV YLH
Sbjct: 149 QIVLTFEYLH 158
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 58/118 (49%), Gaps = 10/118 (8%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
+G G++ +VVL GK +A+K K L + + + E+ +++ ++H N
Sbjct: 30 LGTGAFSEVVLAEEKATGKLFAVKCIPKKAL--------KGKESSIENEIAVLRKIKHEN 81
Query: 186 IVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
IV L ++ + PN H Y+V++ V G D + G E A +R ++ + YLH
Sbjct: 82 IVALEDIYESPN--HLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLH 137
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 58/120 (48%), Gaps = 5/120 (4%)
Query: 125 KIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHP 184
++G+G + V R G YA K K R S D+ REV I+K +QHP
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRE---DIEREVSILKEIQHP 74
Query: 185 NIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHG 244
N++ L EV + N ++ E V G D + ++ E A ++L+ I++G+ YLH
Sbjct: 75 NVITLHEVYE--NKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 52/119 (43%), Gaps = 8/119 (6%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
+G GS+ VVL R + YAIK K H+ K E + V RE +M L HP
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKRHIIK------ENKVPYVTRERDVMSRLDHPF 91
Query: 186 IVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHG 244
V L D + Y L Y + + G+ E+ R Y +IVS L YLHG
Sbjct: 92 FVKLYFTFQD--DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 148
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 63/131 (48%), Gaps = 8/131 (6%)
Query: 114 TKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRR 173
T ++++ ++ +G GS+G+V+L + G HYA+K K + KL+ E + + R
Sbjct: 38 TAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQI--EHTLNEKR- 94
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLR 233
I++ + P +V L D + + YMV+EYV G + G E AR Y
Sbjct: 95 ---ILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 149
Query: 234 DIVSGLMYLHG 244
IV YLH
Sbjct: 150 QIVLTFEYLHS 160
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 52/119 (43%), Gaps = 8/119 (6%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
+G GS+ VVL R + YAIK K H+ K E + V RE +M L HP
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKRHIIK------ENKVPYVTRERDVMSRLDHPF 91
Query: 186 IVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHG 244
V L D + Y L Y + + G+ E+ R Y +IVS L YLHG
Sbjct: 92 FVKLYFTFQD--DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 148
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 63/131 (48%), Gaps = 8/131 (6%)
Query: 114 TKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRR 173
T ++++ ++ +G GS+G+V+L + G HYA+K K + KL+ E + + R
Sbjct: 38 TAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQI--EHTLNEKR- 94
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLR 233
I++ + P +V L D + + YMV+EYV G + G E AR Y
Sbjct: 95 ---ILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 149
Query: 234 DIVSGLMYLHG 244
IV YLH
Sbjct: 150 QIVLTFEYLHS 160
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 63/131 (48%), Gaps = 8/131 (6%)
Query: 114 TKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRR 173
T ++++ ++ +G GS+G+V+L + G HYA+K K + KL+ E + + R
Sbjct: 38 TAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQI--EHTLNEKR- 94
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLR 233
I++ + P +V L D + + YMV+EYV G + G E AR Y
Sbjct: 95 ---ILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 149
Query: 234 DIVSGLMYLHG 244
IV YLH
Sbjct: 150 QIVLTFEYLHS 160
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 52/119 (43%), Gaps = 8/119 (6%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
+G GS+ VVL R + YAIK K H+ K E + V RE +M L HP
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKRHIIK------ENKVPYVTRERDVMSRLDHPF 91
Query: 186 IVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHG 244
V L D + Y L Y + + G+ E+ R Y +IVS L YLHG
Sbjct: 92 FVKLYFTFQD--DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 148
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 52/119 (43%), Gaps = 8/119 (6%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
+G GS+ VVL R + YAIK K H+ K E + V RE +M L HP
Sbjct: 22 LGEGSFSTVVLARELATSREYAIKILEKRHIIK------ENKVPYVTRERDVMSRLDHPF 75
Query: 186 IVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHG 244
V L D + Y L Y + + G+ E+ R Y +IVS L YLHG
Sbjct: 76 FVKLYFTFQD--DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 132
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 52/119 (43%), Gaps = 8/119 (6%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
+G GS+ VVL R + YAIK K H+ K E + V RE +M L HP
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIK------ENKVPYVTRERDVMSRLDHPF 93
Query: 186 IVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHG 244
V L D + Y L Y + + G+ E+ R Y +IVS L YLHG
Sbjct: 94 FVKLYFTFQD--DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 150
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 52/119 (43%), Gaps = 8/119 (6%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
+G GS+ VVL R + YAIK K H+ K E + V RE +M L HP
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIK------ENKVPYVTRERDVMSRLDHPF 93
Query: 186 IVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHG 244
V L D + Y L Y + + G+ E+ R Y +IVS L YLHG
Sbjct: 94 FVKLYFTFQD--DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 150
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 59/127 (46%), Gaps = 12/127 (9%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
+ Y V+ IG+G++G L R + A+K + E +V+RE++
Sbjct: 19 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERG----------EKIDENVKREIIN 68
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVS 237
+ L+HPNIV EVI P H +V+EY G + G E AR + + ++S
Sbjct: 69 HRSLRHPNIVRFKEVILTPT--HLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS 126
Query: 238 GLMYLHG 244
G+ Y H
Sbjct: 127 GVSYCHA 133
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 52/119 (43%), Gaps = 8/119 (6%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
+G GS+ VVL R + YAIK K H+ K E + V RE +M L HP
Sbjct: 37 LGEGSFSTVVLARELATSREYAIKILEKRHIIK------ENKVPYVTRERDVMSRLDHPF 90
Query: 186 IVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHG 244
V L D + Y L Y + + G+ E+ R Y +IVS L YLHG
Sbjct: 91 FVKLYFTFQD--DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 147
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 52/119 (43%), Gaps = 8/119 (6%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
+G GS+ VVL R + YAIK K H+ K E + V RE +M L HP
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIK------ENKVPYVTRERDVMSRLDHPF 93
Query: 186 IVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHG 244
V L D + Y L Y + + G+ E+ R Y +IVS L YLHG
Sbjct: 94 FVKLYFTFQD--DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 150
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 52/119 (43%), Gaps = 8/119 (6%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
+G GS+ VVL R + YAIK K H+ K E + V RE +M L HP
Sbjct: 41 LGEGSFSTVVLARELATSREYAIKILEKRHIIK------ENKVPYVTRERDVMSRLDHPF 94
Query: 186 IVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHG 244
V L D + Y L Y + + G+ E+ R Y +IVS L YLHG
Sbjct: 95 FVKLYFTFQD--DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 151
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 59/127 (46%), Gaps = 12/127 (9%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
+ Y V+ IG+G++G L R + A+K + E +V+RE++
Sbjct: 18 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERG----------EKIDENVKREIIN 67
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVS 237
+ L+HPNIV EVI P H +V+EY G + G E AR + + ++S
Sbjct: 68 HRSLRHPNIVRFKEVILTPT--HLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS 125
Query: 238 GLMYLHG 244
G+ Y H
Sbjct: 126 GVSYCHA 132
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 63/131 (48%), Gaps = 8/131 (6%)
Query: 114 TKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRR 173
T ++++ ++ +G GS+G+V+L + G HYA+K K + KL+ E + + R
Sbjct: 30 TAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQI--EHTLNEKR- 86
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLR 233
I++ + P +V L D + + YMV+EYV G + G E AR Y
Sbjct: 87 ---ILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 141
Query: 234 DIVSGLMYLHG 244
IV YLH
Sbjct: 142 QIVLTFEYLHS 152
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 52/119 (43%), Gaps = 8/119 (6%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
+G GS+ VVL R + YAIK K H+ K E + V RE +M L HP
Sbjct: 41 LGEGSFSTVVLARELATSREYAIKILEKRHIIK------ENKVPYVTRERDVMSRLDHPF 94
Query: 186 IVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHG 244
V L D + Y L Y + + G+ E+ R Y +IVS L YLHG
Sbjct: 95 FVKLYFTFQD--DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 151
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 59/127 (46%), Gaps = 12/127 (9%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
+ Y V+ IG+G++G L R + A+K + E +V+RE++
Sbjct: 19 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERG----------EKIDENVKREIIN 68
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVS 237
+ L+HPNIV EVI P H +V+EY G + G E AR + + ++S
Sbjct: 69 HRSLRHPNIVRFKEVILTPT--HLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS 126
Query: 238 GLMYLHG 244
G+ Y H
Sbjct: 127 GVSYCHA 133
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 52/119 (43%), Gaps = 8/119 (6%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
+G GS+ VVL R + YAIK K H+ K E + V RE +M L HP
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIK------ENKVPYVTRERDVMSRLDHPF 93
Query: 186 IVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHG 244
V L D + Y L Y + + G+ E+ R Y +IVS L YLHG
Sbjct: 94 FVKLYFTFQD--DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 150
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 52/119 (43%), Gaps = 8/119 (6%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
+G GS+ VVL R + YAIK K H+ K E + V RE +M L HP
Sbjct: 43 LGEGSFSTVVLARELATSREYAIKILEKRHIIK------ENKVPYVTRERDVMSRLDHPF 96
Query: 186 IVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHG 244
V L D + Y L Y + + G+ E+ R Y +IVS L YLHG
Sbjct: 97 FVKLYFTFQD--DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 153
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 52/119 (43%), Gaps = 8/119 (6%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
+G GS+ VVL R + YAIK K H+ K E + V RE +M L HP
Sbjct: 37 LGEGSFSTVVLARELATSREYAIKILEKRHIIK------ENKVPYVTRERDVMSRLDHPF 90
Query: 186 IVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHG 244
V L D + Y L Y + + G+ E+ R Y +IVS L YLHG
Sbjct: 91 FVKLYFTFQD--DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 147
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 52/119 (43%), Gaps = 8/119 (6%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
+G GS+ VVL R + YAIK K H+ K E + V RE +M L HP
Sbjct: 45 LGEGSFSTVVLARELATSREYAIKILEKRHIIK------ENKVPYVTRERDVMSRLDHPF 98
Query: 186 IVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHG 244
V L D + Y L Y + + G+ E+ R Y +IVS L YLHG
Sbjct: 99 FVKLYFCFQD--DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 155
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 12/127 (9%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
+ Y V+ IG+G++G L R L + A+K + A E +V+RE++
Sbjct: 20 DRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERG------AAIDE----NVQREIIN 69
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVS 237
+ L+HPNIV EVI P H +++EY G + G E AR + + ++S
Sbjct: 70 HRSLRHPNIVRFKEVILTPT--HLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLS 127
Query: 238 GLMYLHG 244
G+ Y H
Sbjct: 128 GVSYCHS 134
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 52/119 (43%), Gaps = 8/119 (6%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
+G GS+ VVL R + YAIK K H+ K E + V RE +M L HP
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIK------ENKVPYVTRERDVMSRLDHPF 93
Query: 186 IVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHG 244
V L D + Y L Y + + G+ E+ R Y +IVS L YLHG
Sbjct: 94 FVKLYFTFQD--DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 150
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 61/130 (46%), Gaps = 8/130 (6%)
Query: 114 TKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRR 173
T ++++ +R +G GS+G+V+L + G HYA+K K + KL+ E + + R
Sbjct: 38 TAHLDQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQI--EHTLNEKR- 94
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLR 233
I + + P +V L D + + YMVLEY G + G E AR Y
Sbjct: 95 ---IQQAVNFPFLVKLEFSFKD--NSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAA 149
Query: 234 DIVSGLMYLH 243
IV YLH
Sbjct: 150 QIVLTFEYLH 159
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 63/131 (48%), Gaps = 8/131 (6%)
Query: 114 TKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRR 173
T ++++ ++ +G GS+G+V+L + G HYA+K K + KL+ E + + R
Sbjct: 38 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI--EHTLNEKR- 94
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLR 233
I++ + P +V L D + + YMV+EYV G + G E AR Y
Sbjct: 95 ---ILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 149
Query: 234 DIVSGLMYLHG 244
IV YLH
Sbjct: 150 QIVLTFEYLHS 160
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 62/127 (48%), Gaps = 16/127 (12%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRV-APSETAMTDVRREVLIMKML 181
V KIG G+YG V R+ L G+ A L K+R+ +E + RE+ ++K L
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVA--------LXKIRLDTETEGVPSTAIREISLLKEL 59
Query: 182 QHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGA---IGESMARKYLRDIVSG 238
HPNIV L++VI N Y+V E++ D F A I + + YL ++ G
Sbjct: 60 NHPNIVKLLDVIHTENK--LYLVFEFLHQ--DLKKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 239 LMYLHGH 245
L + H H
Sbjct: 116 LAFCHSH 122
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 62/127 (48%), Gaps = 16/127 (12%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRV-APSETAMTDVRREVLIMKML 181
V KIG G+YG V R+ L G+ A L K+R+ +E + RE+ ++K L
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVA--------LXKIRLDTETEGVPSTAIREISLLKEL 58
Query: 182 QHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGA---IGESMARKYLRDIVSG 238
HPNIV L++VI N Y+V E++ D F A I + + YL ++ G
Sbjct: 59 NHPNIVKLLDVIHTENK--LYLVFEFLHQ--DLKKFMDASALTGIPLPLIKSYLFQLLQG 114
Query: 239 LMYLHGH 245
L + H H
Sbjct: 115 LAFCHSH 121
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 8/131 (6%)
Query: 114 TKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRR 173
T ++++ ++ +G GS+G+V+L + G HYA+K K + KL+ +
Sbjct: 38 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLK------QIEHTLN 91
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLR 233
E I++ + P +V L D + + YMV+EYV G + G E AR Y
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 149
Query: 234 DIVSGLMYLHG 244
IV YLH
Sbjct: 150 QIVLTFEYLHS 160
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 63/131 (48%), Gaps = 8/131 (6%)
Query: 114 TKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRR 173
T ++++ ++ +G GS+G+V+L + G HYA+K K + KL+ E + + R
Sbjct: 37 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI--EHTLNEKR- 93
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLR 233
I++ + P +V L D + + YMV+EYV G + G E AR Y
Sbjct: 94 ---ILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 234 DIVSGLMYLHG 244
IV YLH
Sbjct: 149 QIVLTFEYLHS 159
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 63/131 (48%), Gaps = 8/131 (6%)
Query: 114 TKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRR 173
T ++++ ++ +G GS+G+V+L + G HYA+K K + KL+ E + + R
Sbjct: 37 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI--EHTLNEKR- 93
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLR 233
I++ + P +V L D + + YMV+EYV G + G E AR Y
Sbjct: 94 ---ILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 234 DIVSGLMYLHG 244
IV YLH
Sbjct: 149 QIVLTFEYLHS 159
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 63/130 (48%), Gaps = 8/130 (6%)
Query: 114 TKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRR 173
T ++++ ++ +G GS+G+V+L + G HYA+K K + KL+ E + + R
Sbjct: 37 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI--EHTLNEKR- 93
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLR 233
I++ + P +V L D + + YMV+EYV G + G E AR Y
Sbjct: 94 ---ILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 234 DIVSGLMYLH 243
IV YLH
Sbjct: 149 QIVLTFEYLH 158
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 63/131 (48%), Gaps = 8/131 (6%)
Query: 114 TKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRR 173
T ++++ ++ +G GS+G+V+L + G HYA+K K + KL+ E + + R
Sbjct: 23 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI--EHTLNEKR- 79
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLR 233
I++ + P +V L D + + YMV+EYV G + G E AR Y
Sbjct: 80 ---ILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 134
Query: 234 DIVSGLMYLHG 244
IV YLH
Sbjct: 135 QIVLTFEYLHS 145
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 8/131 (6%)
Query: 114 TKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRR 173
T ++++ ++ +G GS+G+V+L + G HYA+K K + KL+ +
Sbjct: 37 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLK------QIEHTLN 90
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLR 233
E I++ + P +V L D + + YMV+EYV G + G E AR Y
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 234 DIVSGLMYLHG 244
IV YLH
Sbjct: 149 QIVLTFEYLHS 159
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 63/131 (48%), Gaps = 8/131 (6%)
Query: 114 TKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRR 173
T ++++ ++ +G GS+G+V+L + G HYA+K K + KL+ E + + R
Sbjct: 30 TAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQI--EHTLNEKR- 86
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLR 233
I++ + P +V L D + + YMV+EYV G + G E AR Y
Sbjct: 87 ---ILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAA 141
Query: 234 DIVSGLMYLHG 244
IV YLH
Sbjct: 142 QIVLTFEYLHS 152
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 8/131 (6%)
Query: 114 TKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRR 173
T ++++ ++ +G GS+G+V+L + G H+A+K K + KL+ +
Sbjct: 37 TAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLK------QIEHTLN 90
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLR 233
E I++ + P +V L D + + YMV+EYV G + G E AR Y
Sbjct: 91 EKRILQAVNFPFLVKLEYSFKD--NSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 234 DIVSGLMYLHG 244
IV YLH
Sbjct: 149 QIVLTFEYLHS 159
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 63/131 (48%), Gaps = 8/131 (6%)
Query: 114 TKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRR 173
T ++++ ++ +G GS+G+V+L + G HYA+K K + KL+ E + + R
Sbjct: 38 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI--EHTLNEKR- 94
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLR 233
I++ + P +V L D + + YMV+EYV G + G E AR Y
Sbjct: 95 ---ILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAA 149
Query: 234 DIVSGLMYLHG 244
IV YLH
Sbjct: 150 QIVLTFEYLHS 160
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 61/130 (46%), Gaps = 8/130 (6%)
Query: 114 TKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRR 173
T ++++ ++ +G GS+G+V+L + G HYA+K K + KL+ +
Sbjct: 37 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLK------QIEHTLN 90
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLR 233
E I++ + P +V L D + + YMV+EYV G + G E AR Y
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAA 148
Query: 234 DIVSGLMYLH 243
IV YLH
Sbjct: 149 QIVLTFEYLH 158
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 8/131 (6%)
Query: 114 TKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRR 173
T ++++ ++ +G GS+G+V+L + G H+A+K K + KL+ +
Sbjct: 37 TAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLK------QIEHTLN 90
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLR 233
E I++ + P +V L D + + YMV+EYV G + G E AR Y
Sbjct: 91 EKRILQAVNFPFLVKLEYSFKD--NSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 234 DIVSGLMYLHG 244
IV YLH
Sbjct: 149 QIVLTFEYLHS 159
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 8/131 (6%)
Query: 114 TKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRR 173
T ++++ ++ +G GS+G+V+L + G H+A+K K + KL+ +
Sbjct: 37 TAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLK------QIEHTLN 90
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLR 233
E I++ + P +V L D + + YMV+EYV G + G E AR Y
Sbjct: 91 EKRILQAVNFPFLVKLEYSFKD--NSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 234 DIVSGLMYLHG 244
IV YLH
Sbjct: 149 QIVLTFEYLHS 159
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 63/130 (48%), Gaps = 8/130 (6%)
Query: 114 TKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRR 173
T ++++ ++ +G GS+G+V+L + G HYA+K K + KL+ E + + R
Sbjct: 37 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI--EHTLNEKR- 93
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLR 233
I++ + P +V L D + + YMV+EYV G + G E AR Y
Sbjct: 94 ---ILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAA 148
Query: 234 DIVSGLMYLH 243
IV YLH
Sbjct: 149 QIVLTFEYLH 158
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 60/127 (47%), Gaps = 7/127 (5%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
I+ + +R +G GS+GKV+L R G YA+K K + L+ E MT+ R +
Sbjct: 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVI--LQDDDVECTMTEKR---I 76
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
+ HP + L P D + V+E+V G + E+ AR Y +I+
Sbjct: 77 LSLARNHPFLTQLFCCFQTP--DRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEII 134
Query: 237 SGLMYLH 243
S LM+LH
Sbjct: 135 SALMFLH 141
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 65/133 (48%), Gaps = 14/133 (10%)
Query: 114 TKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRR 173
T ++++ ++ IG GS+G+V+L + G HYA+K K + KL+ E + + R
Sbjct: 37 TAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI--EHTLNEKR- 93
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIG---ESMARK 230
I++ + P +V L D + + YMV+EY+ G D F IG E AR
Sbjct: 94 ---ILQAVNFPFLVKLEFSFKD--NSNLYMVMEYMPG---GDMFSHLRRIGRFSEPHARF 145
Query: 231 YLRDIVSGLMYLH 243
Y IV YLH
Sbjct: 146 YAAQIVLTFEYLH 158
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 65/133 (48%), Gaps = 14/133 (10%)
Query: 114 TKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRR 173
T ++++ ++ IG GS+G+V+L + G HYA+K K + KL+ E + + R
Sbjct: 37 TAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI--EHTLNEKR- 93
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIG---ESMARK 230
I++ + P +V L D + + YMV+EY+ G D F IG E AR
Sbjct: 94 ---ILQAVNFPFLVKLEFSFKD--NSNLYMVMEYMPG---GDMFSHLRRIGRFSEPHARF 145
Query: 231 YLRDIVSGLMYLH 243
Y IV YLH
Sbjct: 146 YAAQIVLTFEYLH 158
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 67/130 (51%), Gaps = 11/130 (8%)
Query: 114 TKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRR 173
T + ++ + +G+G++ +V L + L GK +A+K KS + + +
Sbjct: 5 TNIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFR---------DSSLEN 55
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLR 233
E+ ++K ++H NIV L ++ + ++ H+Y+V++ V G D + G E A ++
Sbjct: 56 EIAVLKKIKHENIVTLEDIYE--STTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQ 113
Query: 234 DIVSGLMYLH 243
++S + YLH
Sbjct: 114 QVLSAVKYLH 123
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 51/119 (42%), Gaps = 8/119 (6%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
+G GS+ VL R + YAIK K H+ K E + V RE +M L HP
Sbjct: 38 LGEGSFSTTVLARELATSREYAIKILEKRHIIK------ENKVPYVTRERDVMSRLDHPF 91
Query: 186 IVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHG 244
V L D + Y L Y + + G+ E+ R Y +IVS L YLHG
Sbjct: 92 FVKLYFTFQD--DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 148
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 62/131 (47%), Gaps = 8/131 (6%)
Query: 114 TKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRR 173
T ++++ ++ +G GS+G+V+L + G HYA+K K + KL+ E + + R
Sbjct: 38 TAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQI--EHTLNEKR- 94
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLR 233
I++ + P +V L D + + YMV+EY G + G E AR Y
Sbjct: 95 ---ILQAVNFPFLVKLEFSFKD--NSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAA 149
Query: 234 DIVSGLMYLHG 244
IV YLH
Sbjct: 150 QIVLTFEYLHS 160
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 63/130 (48%), Gaps = 14/130 (10%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
++ RK+G+G++G V L G IK +K S+ M + E+ ++K
Sbjct: 24 FIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDR--------SQVPMEQIEAEIEVLK 75
Query: 180 MLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKY----LRDI 235
L HPNI+ + EV +D ++ Y+V+E EG + A G++++ Y ++ +
Sbjct: 76 SLDHPNIIKIFEVFEDYHN--MYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQM 133
Query: 236 VSGLMYLHGH 245
++ L Y H
Sbjct: 134 MNALAYFHSQ 143
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 60/130 (46%), Gaps = 8/130 (6%)
Query: 114 TKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRR 173
T ++++ ++ +G GS+G+V+L + G HYA+K K + KL+ +
Sbjct: 37 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLK------QIEHTLN 90
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLR 233
E I++ + P +V L D + + YMV+EY G + G E AR Y
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 234 DIVSGLMYLH 243
IV YLH
Sbjct: 149 QIVLTFEYLH 158
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 60/130 (46%), Gaps = 8/130 (6%)
Query: 114 TKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRR 173
T ++++ ++ +G GS+G+V+L + G HYA+K K + KL+ +
Sbjct: 37 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLK------EIEHTLN 90
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLR 233
E I++ + P +V L D + + YMV+EY G + G E AR Y
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 234 DIVSGLMYLH 243
IV YLH
Sbjct: 149 QIVLTFEYLH 158
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 60/130 (46%), Gaps = 8/130 (6%)
Query: 114 TKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRR 173
T ++++ ++ +G GS+G+V+L + G HYA+K K + KL+ +
Sbjct: 37 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLK------QIEHTLN 90
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLR 233
E I++ + P +V L D + + YMV+EY G + G E AR Y
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 234 DIVSGLMYLH 243
IV YLH
Sbjct: 149 QIVLTFEYLH 158
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 8/131 (6%)
Query: 114 TKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRR 173
T ++++ ++ +G GS+G+V+L + G HYA+K K + KL+ +
Sbjct: 37 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLK------EIEHTLN 90
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLR 233
E I++ + P +V L D + + YMV+EY G + G E AR Y
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKD--NSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 234 DIVSGLMYLHG 244
IV YLH
Sbjct: 149 QIVLTFEYLHS 159
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 62/130 (47%), Gaps = 8/130 (6%)
Query: 114 TKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRR 173
T ++++ ++ +G GS+G+V+L + G HYA+K K + KL+ E + + R
Sbjct: 37 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI--EHTLNEKR- 93
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLR 233
I++ + P +V L D + + YMV+EY G + G E AR Y
Sbjct: 94 ---ILQAVNFPFLVKLEFSFKD--NSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAA 148
Query: 234 DIVSGLMYLH 243
IV YLH
Sbjct: 149 QIVLTFEYLH 158
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 62/129 (48%), Gaps = 9/129 (6%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
I Y+ +G GS+GKV L + A+K + L K S+ M V RE+
Sbjct: 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKK-----SDMHMR-VEREIS 61
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
+K+L+HP+I+ L +VI P MV+EY G+ D + + E R++ + I+
Sbjct: 62 YLKLLRHPHIIKLYDVITTPTD--IVMVIEYAGGEL-FDYIVEKKRMTEDEGRRFFQQII 118
Query: 237 SGLMYLHGH 245
+ Y H H
Sbjct: 119 CAIEYCHRH 127
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 5/119 (4%)
Query: 125 KIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHP 184
++G+G + V R G YA K K + R + ++ REV I++ + HP
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKR---QSRASRRGVCREEIEREVSILRQVLHP 75
Query: 185 NIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
NI+ L +V + N ++LE V G D Q ++ E A +++ I+ G+ YLH
Sbjct: 76 NIITLHDVYE--NRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH 132
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 59/128 (46%), Gaps = 8/128 (6%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
+N++ +++ +G G++GKV+L R G++YA+K K + +A E A T VL
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVI----IAKDEVAHTVTESRVL 59
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
+ +HP + L D V+EY G + E AR Y +IV
Sbjct: 60 --QNTRHPFLTALKYAFQ--THDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIV 115
Query: 237 SGLMYLHG 244
S L YLH
Sbjct: 116 SALEYLHS 123
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 59/128 (46%), Gaps = 8/128 (6%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
+N++ +++ +G G++GKV+L R G++YA+K K + +A E A T VL
Sbjct: 7 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVI----IAKDEVAHTVTESRVL 62
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
+ +HP + L D V+EY G + E AR Y +IV
Sbjct: 63 --QNTRHPFLTALKYAFQ--THDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIV 118
Query: 237 SGLMYLHG 244
S L YLH
Sbjct: 119 SALEYLHS 126
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 59/128 (46%), Gaps = 8/128 (6%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
+N++ +++ +G G++GKV+L R G++YA+K K + +A E A T VL
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVI----IAKDEVAHTVTESRVL 59
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
+ +HP + L D V+EY G + E AR Y +IV
Sbjct: 60 --QNTRHPFLTALKYAFQ--THDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIV 115
Query: 237 SGLMYLHG 244
S L YLH
Sbjct: 116 SALEYLHS 123
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 59/128 (46%), Gaps = 8/128 (6%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
+N++ +++ +G G++GKV+L R G++YA+K K + +A E A T VL
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVI----IAKDEVAHTVTESRVL 59
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
+ +HP + L D V+EY G + E AR Y +IV
Sbjct: 60 --QNTRHPFLTALKYAFQ--THDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIV 115
Query: 237 SGLMYLHG 244
S L YLH
Sbjct: 116 SALEYLHS 123
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 59/131 (45%), Gaps = 8/131 (6%)
Query: 114 TKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRR 173
T ++++ ++ +G GS+G+V+L + G HYA+K K + KL+ +
Sbjct: 38 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLK------QIEHTLN 91
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLR 233
E I++ + P + L D + + YMV+EY G + G E AR Y
Sbjct: 92 EKRILQAVNFPFLTKLEFSFKD--NSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAA 149
Query: 234 DIVSGLMYLHG 244
IV YLH
Sbjct: 150 QIVLTFEYLHS 160
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 59/128 (46%), Gaps = 8/128 (6%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
+N++ +++ +G G++GKV+L R G++YA+K K + +A E A T VL
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVI----IAKDEVAHTVTESRVL 59
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
+ +HP + L D V+EY G + E AR Y +IV
Sbjct: 60 --QNTRHPFLTALKYAFQ--THDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIV 115
Query: 237 SGLMYLHG 244
S L YLH
Sbjct: 116 SALEYLHS 123
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 59/128 (46%), Gaps = 8/128 (6%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
+N++ +++ +G G++GKV+L R G++YA+K K + +A E A T VL
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVI----IAKDEVAHTVTESRVL 59
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
+ +HP + L D V+EY G + E AR Y +IV
Sbjct: 60 --QNTRHPFLTALKYAFQ--THDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIV 115
Query: 237 SGLMYLHG 244
S L YLH
Sbjct: 116 SALEYLHS 123
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 8/130 (6%)
Query: 114 TKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRR 173
T ++++ ++ +G GS+G+V+L + G HYA+K K + KL+ +
Sbjct: 38 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLK------QIEHTLN 91
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLR 233
E I++ + P + L D + + YMV+EY G + G E AR Y
Sbjct: 92 EKRILQAVNFPFLTKLEFSFKD--NSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAA 149
Query: 234 DIVSGLMYLH 243
IV YLH
Sbjct: 150 QIVLTFEYLH 159
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 63/128 (49%), Gaps = 8/128 (6%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
+ ++ +R +G GS+G+V L RS +G++YA+K K + +L+ + E L
Sbjct: 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLK------QVEHTNDERL 58
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
++ ++ HP I+ + D + +M+++Y+EG + +A+ Y ++
Sbjct: 59 MLSIVTHPFIIRMWGTFQD--AQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVC 116
Query: 237 SGLMYLHG 244
L YLH
Sbjct: 117 LALEYLHS 124
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 59/128 (46%), Gaps = 8/128 (6%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
+N++ +++ +G G++GKV+L R G++YA+K K + +A E A T VL
Sbjct: 9 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVI----IAKDEVAHTVTESRVL 64
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
+ +HP + L D V+EY G + E AR Y +IV
Sbjct: 65 --QNTRHPFLTALKYAFQ--THDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIV 120
Query: 237 SGLMYLHG 244
S L YLH
Sbjct: 121 SALEYLHS 128
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 59/127 (46%), Gaps = 8/127 (6%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
+NE+ +++ +G G++GKV+L + G++YA+K K + VA E A T VL
Sbjct: 150 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVI----VAKDEVAHTLTENRVL 205
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
+ +HP + L D V+EY G + E AR Y +IV
Sbjct: 206 --QNSRHPFLTALKYSFQ--THDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIV 261
Query: 237 SGLMYLH 243
S L YLH
Sbjct: 262 SALDYLH 268
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 59/127 (46%), Gaps = 8/127 (6%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
+NE+ +++ +G G++GKV+L + G++YA+K K + VA E A T VL
Sbjct: 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVI----VAKDEVAHTLTENRVL 202
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
+ +HP + L D V+EY G + E AR Y +IV
Sbjct: 203 --QNSRHPFLTALKYSFQ--THDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIV 258
Query: 237 SGLMYLH 243
S L YLH
Sbjct: 259 SALDYLH 265
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 60/127 (47%), Gaps = 8/127 (6%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
+NE+ +++ +G G++GKV+L + G++YA+K K ++ VA E A T VL
Sbjct: 7 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKK----EVIVAKDEVAHTLTENRVL 62
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
+ +HP + L D V+EY G + E AR Y +IV
Sbjct: 63 --QNSRHPFLTALKYSFQ--THDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIV 118
Query: 237 SGLMYLH 243
S L YLH
Sbjct: 119 SALDYLH 125
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 60/127 (47%), Gaps = 8/127 (6%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
+NE+ +++ +G G++GKV+L + G++YA+K K ++ VA E A T VL
Sbjct: 8 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKK----EVIVAKDEVAHTLTENRVL 63
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
+ +HP + L D V+EY G + E AR Y +IV
Sbjct: 64 --QNSRHPFLTALKYSFQ--THDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIV 119
Query: 237 SGLMYLH 243
S L YLH
Sbjct: 120 SALDYLH 126
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 8/130 (6%)
Query: 114 TKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRR 173
T ++++ ++ +G GS+G+V+L + G HYA+K K + KL+ +
Sbjct: 38 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLK------QIEHTLN 91
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLR 233
E I++ + P + L D + + YMV+EY G + G E AR Y
Sbjct: 92 EKRILQAVNFPFLTKLEFSFKD--NSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAA 149
Query: 234 DIVSGLMYLH 243
IV YLH
Sbjct: 150 QIVLTFEYLH 159
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 60/127 (47%), Gaps = 8/127 (6%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
+NE+ +++ +G G++GKV+L + G++YA+K K ++ VA E A T VL
Sbjct: 9 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKK----EVIVAKDEVAHTLTENRVL 64
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
+ +HP + L D V+EY G + E AR Y +IV
Sbjct: 65 --QNSRHPFLTALKYSFQ--THDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIV 120
Query: 237 SGLMYLH 243
S L YLH
Sbjct: 121 SALDYLH 127
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 62/132 (46%), Gaps = 13/132 (9%)
Query: 115 KMINE-YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVR- 172
K+INE Y V K+G G V L ++ AIKA + + P E T R
Sbjct: 7 KIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKA--------IFIPPREKEETLKRF 58
Query: 173 -REVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKY 231
REV L H NIV++I+V D D +Y+V+EY+EG ++ G + A +
Sbjct: 59 EREVHNSSQLSHQNIVSMIDV--DEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINF 116
Query: 232 LRDIVSGLMYLH 243
I+ G+ + H
Sbjct: 117 TNQILDGIKHAH 128
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 65/133 (48%), Gaps = 6/133 (4%)
Query: 114 TKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRR 173
K+I +Y+ +G GSYGKV + LD + +A KLR P+ A +V++
Sbjct: 1 AKLIGKYLMGDLLGEGSYGKV---KEVLDSETLCRRAVKILKKKKLRRIPNGEA--NVKK 55
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEY-VEGKWDNDGFGQPGAIGESMARKYL 232
E+ +++ L+H N++ L++V+ + YMV+EY V G + A Y
Sbjct: 56 EIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYF 115
Query: 233 RDIVSGLMYLHGH 245
++ GL YLH
Sbjct: 116 CQLIDGLEYLHSQ 128
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 61/126 (48%), Gaps = 4/126 (3%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
+EY+ + +G+G+ G+V L K AIK K + ++ A+ +V E+ I
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPAL-NVETEIEI 68
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVS 237
+K L HP I+ + D ++ +Y+VLE +EG D + E+ + Y ++
Sbjct: 69 LKKLNHPCIIKIKNFFD---AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 125
Query: 238 GLMYLH 243
+ YLH
Sbjct: 126 AVQYLH 131
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 61/126 (48%), Gaps = 4/126 (3%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
+EY+ + +G+G+ G+V L K AIK K + ++ A+ +V E+ I
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPAL-NVETEIEI 68
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVS 237
+K L HP I+ + D ++ +Y+VLE +EG D + E+ + Y ++
Sbjct: 69 LKKLNHPCIIKIKNFFD---AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 125
Query: 238 GLMYLH 243
+ YLH
Sbjct: 126 AVQYLH 131
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 61/126 (48%), Gaps = 4/126 (3%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
+EY+ + +G+G+ G+V L K AIK K + ++ A+ +V E+ I
Sbjct: 9 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPAL-NVETEIEI 67
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVS 237
+K L HP I+ + D ++ +Y+VLE +EG D + E+ + Y ++
Sbjct: 68 LKKLNHPCIIKIKNFFD---AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 124
Query: 238 GLMYLH 243
+ YLH
Sbjct: 125 AVQYLH 130
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 61/126 (48%), Gaps = 4/126 (3%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
+EY+ + +G+G+ G+V L K AIK K + ++ A+ +V E+ I
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPAL-NVETEIEI 68
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVS 237
+K L HP I+ + D ++ +Y+VLE +EG D + E+ + Y ++
Sbjct: 69 LKKLNHPCIIKIKNFFD---AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 125
Query: 238 GLMYLH 243
+ YLH
Sbjct: 126 AVQYLH 131
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 61/126 (48%), Gaps = 4/126 (3%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
+EY+ + +G+G+ G+V L K AIK K + ++ A+ +V E+ I
Sbjct: 16 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPAL-NVETEIEI 74
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVS 237
+K L HP I+ + D ++ +Y+VLE +EG D + E+ + Y ++
Sbjct: 75 LKKLNHPCIIKIKNFFD---AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 131
Query: 238 GLMYLH 243
+ YLH
Sbjct: 132 AVQYLH 137
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 93/234 (39%), Gaps = 11/234 (4%)
Query: 10 RDMGCCSCFGFTRRKPKQALRPITGLNYRISRDFLLGXXXXXXXXXNSYNGEATNTADGD 69
RD C CF K R + ++RI R+ +S NG NT
Sbjct: 34 RDKSCEYCFDEPLLKRTDKYRTYSKKHFRIFREVGPKNSYIAYIEDHSGNGTFVNTELVG 93
Query: 70 GGEMQNHAKRSEEIFRERELNGLICRQFPVKESNKLIRSEDENGTKMINEYVHVRKIGAG 129
G+ + SE + V + + ++ + +EY+ + +G+G
Sbjct: 94 KGKRRPLNNNSEIALSLSRNKVFVFFDLTVDDQSVYPKA-------LRDEYIMSKTLGSG 146
Query: 130 SYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNL 189
+ G+V L K AI+ K + ++ A+ +V E+ I+K L HP I+ +
Sbjct: 147 ACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPAL-NVETEIEILKKLNHPCIIKI 205
Query: 190 IEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
D ++ +Y+VLE +EG D + E+ + Y ++ + YLH
Sbjct: 206 KNFFD---AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLH 256
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 93/234 (39%), Gaps = 11/234 (4%)
Query: 10 RDMGCCSCFGFTRRKPKQALRPITGLNYRISRDFLLGXXXXXXXXXNSYNGEATNTADGD 69
RD C CF K R + ++RI R+ +S NG NT
Sbjct: 48 RDKSCEYCFDEPLLKRTDKYRTYSKKHFRIFREVGPKNSYIAYIEDHSGNGTFVNTELVG 107
Query: 70 GGEMQNHAKRSEEIFRERELNGLICRQFPVKESNKLIRSEDENGTKMINEYVHVRKIGAG 129
G+ + SE + V + + ++ + +EY+ + +G+G
Sbjct: 108 KGKRRPLNNNSEIALSLSRNKVFVFFDLTVDDQSVYPKA-------LRDEYIMSKTLGSG 160
Query: 130 SYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNL 189
+ G+V L K AI+ K + ++ A+ +V E+ I+K L HP I+ +
Sbjct: 161 ACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPAL-NVETEIEILKKLNHPCIIKI 219
Query: 190 IEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
D ++ +Y+VLE +EG D + E+ + Y ++ + YLH
Sbjct: 220 KNFFD---AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLH 270
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 55/127 (43%), Gaps = 8/127 (6%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
I+++ VR +G G +G V L R + A+K KS L K E +RRE+
Sbjct: 13 IDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEK------EGVEHQLRREIE 66
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
I L+HPNI+ + D Y++LE+ + G E + ++ ++
Sbjct: 67 IQSHLRHPNILRMYNYFHD--RKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELA 124
Query: 237 SGLMYLH 243
L Y H
Sbjct: 125 DALHYCH 131
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 61/126 (48%), Gaps = 18/126 (14%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
IG G++ V + G+ +A+K ++K +P + D++RE I ML+HP+
Sbjct: 32 IGKGAFSVVRRCINRETGQQFAVKIVD---VAKFTSSPG-LSTEDLKREASICHMLKHPH 87
Query: 186 IVNLIEVIDDPNSDHFYMVLEYVEG--------KWDNDGFGQPGAIGESMARKYLRDIVS 237
IV L+E + YMV E+++G K + GF E++A Y+R I+
Sbjct: 88 IVELLETYS--SDGMLYMVFEFMDGADLCFEIVKRADAGF----VYSEAVASHYMRQILE 141
Query: 238 GLMYLH 243
L Y H
Sbjct: 142 ALRYCH 147
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 59/127 (46%), Gaps = 7/127 (5%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
+++ ++ IG GS+GKV+L R + YA+K K + K + E R VL
Sbjct: 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKK----EEKHIMSERNVL- 92
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVS 237
+K ++HP +V L +D Y VL+Y+ G + E AR Y +I S
Sbjct: 93 LKNVKHPFLVGLHFSFQ--TADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIAS 150
Query: 238 GLMYLHG 244
L YLH
Sbjct: 151 ALGYLHS 157
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 60/126 (47%), Gaps = 18/126 (14%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
IG G + V + G+ +A+K ++K +P + D++RE I ML+HP+
Sbjct: 34 IGKGPFSVVRRCINRETGQQFAVKIVD---VAKFTSSPG-LSTEDLKREASICHMLKHPH 89
Query: 186 IVNLIEVIDDPNSDHFYMVLEYVEG--------KWDNDGFGQPGAIGESMARKYLRDIVS 237
IV L+E + YMV E+++G K + GF E++A Y+R I+
Sbjct: 90 IVELLETYS--SDGMLYMVFEFMDGADLCFEIVKRADAGF----VYSEAVASHYMRQILE 143
Query: 238 GLMYLH 243
L Y H
Sbjct: 144 ALRYCH 149
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 60/126 (47%), Gaps = 18/126 (14%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
IG G + V + G+ +A+K ++K +P + D++RE I ML+HP+
Sbjct: 32 IGKGPFSVVRRCINRETGQQFAVKIVD---VAKFTSSPG-LSTEDLKREASICHMLKHPH 87
Query: 186 IVNLIEVIDDPNSDHFYMVLEYVEG--------KWDNDGFGQPGAIGESMARKYLRDIVS 237
IV L+E + YMV E+++G K + GF E++A Y+R I+
Sbjct: 88 IVELLETYS--SDGMLYMVFEFMDGADLCFEIVKRADAGF----VYSEAVASHYMRQILE 141
Query: 238 GLMYLH 243
L Y H
Sbjct: 142 ALRYCH 147
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 64/137 (46%), Gaps = 17/137 (12%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMT-DVRREVL 176
+Y V +IG G+YGKV R +G + L ++RV E M REV
Sbjct: 11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVA-------LKRVRVQTGEEGMPLSTIREVA 63
Query: 177 IMKML---QHPNIVNLIEVIDDPNSDH---FYMVLEYVEGKWDN--DGFGQPGAIGESMA 228
+++ L +HPN+V L +V +D +V E+V+ D +PG E++
Sbjct: 64 VLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETI- 122
Query: 229 RKYLRDIVSGLMYLHGH 245
+ + ++ GL +LH H
Sbjct: 123 KDMMFQLLRGLDFLHSH 139
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 64/137 (46%), Gaps = 17/137 (12%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMT-DVRREVL 176
+Y V +IG G+YGKV R +G + L ++RV E M REV
Sbjct: 11 QQYECVAEIGEGAYGKVFKARDLKNGGRFV-------ALKRVRVQTGEEGMPLSTIREVA 63
Query: 177 IMKML---QHPNIVNLIEVIDDPNSDH---FYMVLEYVEGKWDN--DGFGQPGAIGESMA 228
+++ L +HPN+V L +V +D +V E+V+ D +PG E++
Sbjct: 64 VLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETI- 122
Query: 229 RKYLRDIVSGLMYLHGH 245
+ + ++ GL +LH H
Sbjct: 123 KDMMFQLLRGLDFLHSH 139
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 57/119 (47%), Gaps = 5/119 (4%)
Query: 125 KIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHP 184
++G+G + V R G YA K K + R + + ++ REV I++ + H
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKR---QSRASRRGVSREEIEREVSILRQVLHH 75
Query: 185 NIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
N++ L +V + N ++LE V G D Q ++ E A +++ I+ G+ YLH
Sbjct: 76 NVITLHDVYE--NRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH 132
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 57/119 (47%), Gaps = 5/119 (4%)
Query: 125 KIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHP 184
++G+G + V R G YA K K + R + + ++ REV I++ + H
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKR---QSRASRRGVSREEIEREVSILRQVLHH 75
Query: 185 NIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
N++ L +V + N ++LE V G D Q ++ E A +++ I+ G+ YLH
Sbjct: 76 NVITLHDVYE--NRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH 132
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 57/119 (47%), Gaps = 5/119 (4%)
Query: 125 KIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHP 184
++G+G + V R G YA K K + R + + ++ REV I++ + H
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKR---QSRASRRGVSREEIEREVSILRQVLHH 75
Query: 185 NIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
N++ L +V + N ++LE V G D Q ++ E A +++ I+ G+ YLH
Sbjct: 76 NVITLHDVYE--NRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH 132
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 57/119 (47%), Gaps = 5/119 (4%)
Query: 125 KIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHP 184
++G+G + V R G YA K K + R + + ++ REV I++ + H
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKR---QSRASRRGVSREEIEREVSILRQVLHH 75
Query: 185 NIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
N++ L +V + N ++LE V G D Q ++ E A +++ I+ G+ YLH
Sbjct: 76 NVITLHDVYE--NRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH 132
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 62/129 (48%), Gaps = 12/129 (9%)
Query: 116 MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREV 175
+++ Y ++G G++G V G ++A +K + P E+ VR+E+
Sbjct: 49 VLDHYDIHEELGTGAFGVVHRVTERATGNNFA---------AKFVMTPHESDKETVRKEI 99
Query: 176 LIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVE-GKWDNDGFGQPGAIGESMARKYLRD 234
M +L+HP +VNL + +D N M+ E++ G+ + + E A +Y+R
Sbjct: 100 QTMSVLRHPTLVNLHDAFEDDNE--MVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQ 157
Query: 235 IVSGLMYLH 243
+ GL ++H
Sbjct: 158 VCKGLCHMH 166
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 62/129 (48%), Gaps = 12/129 (9%)
Query: 116 MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREV 175
+++ Y ++G G++G V G ++A +K + P E+ VR+E+
Sbjct: 155 VLDHYDIHEELGTGAFGVVHRVTERATGNNFA---------AKFVMTPHESDKETVRKEI 205
Query: 176 LIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVE-GKWDNDGFGQPGAIGESMARKYLRD 234
M +L+HP +VNL + +D N M+ E++ G+ + + E A +Y+R
Sbjct: 206 QTMSVLRHPTLVNLHDAFEDDN--EMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQ 263
Query: 235 IVSGLMYLH 243
+ GL ++H
Sbjct: 264 VCKGLCHMH 272
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 64/137 (46%), Gaps = 17/137 (12%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMT-DVRREVL 176
+Y V +IG G+YGKV R +G + L ++RV E M REV
Sbjct: 11 QQYECVAEIGEGAYGKVFKARDLKNGGRFV-------ALKRVRVQTGEEGMPLSTIREVA 63
Query: 177 IMKML---QHPNIVNLIEVIDDPNSDH---FYMVLEYVEGKWDN--DGFGQPGAIGESMA 228
+++ L +HPN+V L +V +D +V E+V+ D +PG E++
Sbjct: 64 VLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETI- 122
Query: 229 RKYLRDIVSGLMYLHGH 245
+ + ++ GL +LH H
Sbjct: 123 KDMMFQLLRGLDFLHSH 139
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 53/120 (44%), Gaps = 10/120 (8%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
IG G + KV L L G+ AIK K+ L + + ++ E+ +K L+H +
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIKIMDKNTLG--------SDLPRIKTEIEALKNLRHQH 69
Query: 186 IVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGH 245
I L V++ N +MVLEY G D + E R R IVS + Y+H
Sbjct: 70 ICQLYHVLETANK--IFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQ 127
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 59/121 (48%), Gaps = 9/121 (7%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
+G GS+ V S G AIK K + K + + V+ EV I L+HP+
Sbjct: 19 LGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGM------VQRVQNEVKIHCQLKHPS 72
Query: 186 IVNLIEVIDDPNSDHFYMVLEYVE-GKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHG 244
I+ L +D S++ Y+VLE G+ + + E+ AR ++ I++G++YLH
Sbjct: 73 ILELYNYFED--SNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHS 130
Query: 245 H 245
H
Sbjct: 131 H 131
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 50/95 (52%), Gaps = 11/95 (11%)
Query: 116 MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVR-RE 174
M+ +Y + KIG GSYG V R+ G+ AIK F +S + + + RE
Sbjct: 1 MMEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESE--------DDPVIKKIALRE 52
Query: 175 VLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVE 209
+ ++K L+HPN+VNL+EV ++V EY +
Sbjct: 53 IRMLKQLKHPNLVNLLEVFR--RKRRLHLVFEYCD 85
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 57/119 (47%), Gaps = 5/119 (4%)
Query: 125 KIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHP 184
++G+G + V R G YA K K + R + + ++ REV I++ + H
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKR---QSRASRRGVSREEIEREVSILRQVLHH 75
Query: 185 NIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
N++ L +V + N ++LE V G D Q ++ E A +++ I+ G+ YLH
Sbjct: 76 NVITLHDVYE--NRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH 132
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 64/131 (48%), Gaps = 12/131 (9%)
Query: 116 MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRV-APSETAMTDVRRE 174
++ +Y + K+G G+YG V + S G+ A+K ++R+ A E + RE
Sbjct: 19 LMEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALK--------RIRLDAEDEGIPSTAIRE 69
Query: 175 VLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRD 234
+ ++K L HPNIV+LI+VI +V E++E + +S + YL
Sbjct: 70 ISLLKELHHPNIVSLIDVIHSERC--LTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQ 127
Query: 235 IVSGLMYLHGH 245
++ G+ + H H
Sbjct: 128 LLRGVAHCHQH 138
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 51/128 (39%), Gaps = 8/128 (6%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
I+++ R +G G +G V L R A+K KS + K E +RRE+
Sbjct: 22 IDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEK------EGVEHQLRREIE 75
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
I L HPNI+ L D Y++LEY + E + ++
Sbjct: 76 IQAHLHHPNILRLYNYFYD--RRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELA 133
Query: 237 SGLMYLHG 244
LMY HG
Sbjct: 134 DALMYCHG 141
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 63/136 (46%), Gaps = 8/136 (5%)
Query: 110 DENGTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMT 169
DEN + + +R IG GS+GKV + + + K YA+K +K + +
Sbjct: 7 DENEDVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVE------RNEVR 60
Query: 170 DVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMAR 229
+V +E+ IM+ L+HP +VNL D + +MV++ + G Q E +
Sbjct: 61 NVFKELQIMQGLEHPFLVNLWYSFQD--EEDMFMVVDLLLGGDLRYHLQQNVHFKEETVK 118
Query: 230 KYLRDIVSGLMYLHGH 245
++ ++V L YL
Sbjct: 119 LFICELVMALDYLQNQ 134
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 64/131 (48%), Gaps = 12/131 (9%)
Query: 116 MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRV-APSETAMTDVRRE 174
++ +Y + K+G G+YG V + S G+ A+K ++R+ A E + RE
Sbjct: 19 LMEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALK--------RIRLDAEDEGIPSTAIRE 69
Query: 175 VLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRD 234
+ ++K L HPNIV+LI+VI +V E++E + +S + YL
Sbjct: 70 ISLLKELHHPNIVSLIDVIHSERC--LTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQ 127
Query: 235 IVSGLMYLHGH 245
++ G+ + H H
Sbjct: 128 LLRGVAHCHQH 138
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 49/121 (40%), Gaps = 8/121 (6%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
R +G G +G V L R A+K K+ L K V +RREV I L+H
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE------HQLRREVEIQSHLRH 72
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
PNI+ L D + Y++LEY + E Y+ ++ + L Y H
Sbjct: 73 PNILRLYGYFHD--ATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCH 130
Query: 244 G 244
Sbjct: 131 S 131
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 49/121 (40%), Gaps = 8/121 (6%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
R +G G +G V L R A+K K+ L K V +RREV I L+H
Sbjct: 31 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE------HQLRREVEIQSHLRH 84
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
PNI+ L D + Y++LEY + E Y+ ++ + L Y H
Sbjct: 85 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 142
Query: 244 G 244
Sbjct: 143 S 143
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 49/121 (40%), Gaps = 8/121 (6%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
R +G G +G V L R A+K K+ L K V +RREV I L+H
Sbjct: 16 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE------HQLRREVEIQSHLRH 69
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
PNI+ L D + Y++LEY + E Y+ ++ + L Y H
Sbjct: 70 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 127
Query: 244 G 244
Sbjct: 128 S 128
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 49/121 (40%), Gaps = 8/121 (6%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
R +G G +G V L R A+K K+ L K V +RREV I L+H
Sbjct: 40 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE------HQLRREVEIQSHLRH 93
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
PNI+ L D + Y++LEY + E Y+ ++ + L Y H
Sbjct: 94 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 151
Query: 244 G 244
Sbjct: 152 S 152
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 49/121 (40%), Gaps = 8/121 (6%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
R +G G +G V L R A+K K+ L K V +RREV I L+H
Sbjct: 40 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE------HQLRREVEIQSHLRH 93
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
PNI+ L D + Y++LEY + E Y+ ++ + L Y H
Sbjct: 94 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 151
Query: 244 G 244
Sbjct: 152 S 152
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 49/121 (40%), Gaps = 8/121 (6%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
R +G G +G V L R A+K K+ L K V +RREV I L+H
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE------HQLRREVEIQSHLRH 72
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
PNI+ L D + Y++LEY + E Y+ ++ + L Y H
Sbjct: 73 PNILRLYGYFHD--ATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCH 130
Query: 244 G 244
Sbjct: 131 S 131
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 49/121 (40%), Gaps = 8/121 (6%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
R +G G +G V L R A+K K+ L K V +RREV I L+H
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE------HQLRREVEIQSHLRH 72
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
PNI+ L D + Y++LEY + E Y+ ++ + L Y H
Sbjct: 73 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 130
Query: 244 G 244
Sbjct: 131 S 131
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 49/121 (40%), Gaps = 8/121 (6%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
R +G G +G V L R A+K K+ L K V +RREV I L+H
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE------HQLRREVEIQSHLRH 70
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
PNI+ L D + Y++LEY + E Y+ ++ + L Y H
Sbjct: 71 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 244 G 244
Sbjct: 129 S 129
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 49/121 (40%), Gaps = 8/121 (6%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
R +G G +G V L R A+K K+ L K V +RREV I L+H
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE------HQLRREVEIQSHLRH 72
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
PNI+ L D + Y++LEY + E Y+ ++ + L Y H
Sbjct: 73 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 130
Query: 244 G 244
Sbjct: 131 S 131
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 49/121 (40%), Gaps = 8/121 (6%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
R +G G +G V L R A+K K+ L K V +RREV I L+H
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE------HQLRREVEIQSHLRH 67
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
PNI+ L D + Y++LEY + E Y+ ++ + L Y H
Sbjct: 68 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 244 G 244
Sbjct: 126 S 126
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 49/121 (40%), Gaps = 8/121 (6%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
R +G G +G V L R A+K K+ L K V +RREV I L+H
Sbjct: 16 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE------HQLRREVEIQSHLRH 69
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
PNI+ L D + Y++LEY + E Y+ ++ + L Y H
Sbjct: 70 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 127
Query: 244 G 244
Sbjct: 128 S 128
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 49/121 (40%), Gaps = 8/121 (6%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
R +G G +G V L R A+K K+ L K V +RREV I L+H
Sbjct: 15 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE------HQLRREVEIQSHLRH 68
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
PNI+ L D + Y++LEY + E Y+ ++ + L Y H
Sbjct: 69 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 126
Query: 244 G 244
Sbjct: 127 S 127
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 49/121 (40%), Gaps = 8/121 (6%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
R +G G +G V L R A+K K+ L K V +RREV I L+H
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE------HQLRREVEIQSHLRH 67
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
PNI+ L D + Y++LEY + E Y+ ++ + L Y H
Sbjct: 68 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 244 G 244
Sbjct: 126 S 126
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 49/121 (40%), Gaps = 8/121 (6%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
R +G G +G V L R A+K K+ L K V +RREV I L+H
Sbjct: 15 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE------HQLRREVEIQSHLRH 68
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
PNI+ L D + Y++LEY + E Y+ ++ + L Y H
Sbjct: 69 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 126
Query: 244 G 244
Sbjct: 127 S 127
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 49/121 (40%), Gaps = 8/121 (6%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
R +G G +G V L R A+K K+ L K V +RREV I L+H
Sbjct: 15 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE------HQLRREVEIQSHLRH 68
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
PNI+ L D + Y++LEY + E Y+ ++ + L Y H
Sbjct: 69 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 126
Query: 244 G 244
Sbjct: 127 S 127
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 49/121 (40%), Gaps = 8/121 (6%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
R +G G +G V L R A+K K+ L K V +RREV I L+H
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE------HQLRREVEIQSHLRH 67
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
PNI+ L D + Y++LEY + E Y+ ++ + L Y H
Sbjct: 68 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 244 G 244
Sbjct: 126 S 126
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 49/121 (40%), Gaps = 8/121 (6%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
R +G G +G V L R A+K K+ L K V +RREV I L+H
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE------HQLRREVEIQSHLRH 67
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
PNI+ L D + Y++LEY + E Y+ ++ + L Y H
Sbjct: 68 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 244 G 244
Sbjct: 126 S 126
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 49/121 (40%), Gaps = 8/121 (6%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
R +G G +G V L R A+K K+ L K V +RREV I L+H
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE------HQLRREVEIQSHLRH 72
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
PNI+ L D + Y++LEY + E Y+ ++ + L Y H
Sbjct: 73 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 130
Query: 244 G 244
Sbjct: 131 S 131
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 49/121 (40%), Gaps = 8/121 (6%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
R +G G +G V L R A+K K+ L K V +RREV I L+H
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE------HQLRREVEIQSHLRH 70
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
PNI+ L D + Y++LEY + E Y+ ++ + L Y H
Sbjct: 71 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 244 G 244
Sbjct: 129 S 129
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 56/122 (45%), Gaps = 14/122 (11%)
Query: 125 KIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHP 184
KIGAGS+G V +R+ G A+K + RV + REV IMK L+HP
Sbjct: 44 KIGAGSFGTV--HRAEWHGSDVAVKILMEQDFHAERV-------NEFLREVAIMKRLRHP 94
Query: 185 NIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLR---DIVSGLMY 241
NIV + + P + +V EY+ + GA + R+ L D+ G+ Y
Sbjct: 95 NIVLFMGAVTQP--PNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNY 152
Query: 242 LH 243
LH
Sbjct: 153 LH 154
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 49/121 (40%), Gaps = 8/121 (6%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
R +G G +G V L R A+K K+ L K V +RREV I L+H
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE------HQLRREVEIQSHLRH 70
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
PNI+ L D + Y++LEY + E Y+ ++ + L Y H
Sbjct: 71 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 244 G 244
Sbjct: 129 S 129
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 8/127 (6%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
I+++ R +G G +G V L R + A+K KS L K E +RRE+
Sbjct: 14 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEK------EGVEHQLRREIE 67
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
I L+HPNI+ + D Y++LE+ + G E + ++ ++
Sbjct: 68 IQSHLRHPNILRMYNYFHD--RKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELA 125
Query: 237 SGLMYLH 243
L Y H
Sbjct: 126 DALHYCH 132
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 56/122 (45%), Gaps = 14/122 (11%)
Query: 125 KIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHP 184
KIGAGS+G V +R+ G A+K + RV + REV IMK L+HP
Sbjct: 44 KIGAGSFGTV--HRAEWHGSDVAVKILMEQDFHAERV-------NEFLREVAIMKRLRHP 94
Query: 185 NIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLR---DIVSGLMY 241
NIV + + P + +V EY+ + GA + R+ L D+ G+ Y
Sbjct: 95 NIVLFMGAVTQP--PNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNY 152
Query: 242 LH 243
LH
Sbjct: 153 LH 154
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 49/121 (40%), Gaps = 8/121 (6%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
R +G G +G V L R A+K K+ L K V +RREV I L+H
Sbjct: 14 RPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVE------HQLRREVEIQSHLRH 67
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
PNI+ L D S Y++LEY + E Y+ ++ + L Y H
Sbjct: 68 PNILRLYGYFHD--STRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 244 G 244
Sbjct: 126 S 126
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 8/127 (6%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
I+++ R +G G +G V L R + A+K KS L K E +RRE+
Sbjct: 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEK------EGVEHQLRREIE 66
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
I L+HPNI+ + D Y++LE+ + G E + ++ ++
Sbjct: 67 IQSHLRHPNILRMYNYFHD--RKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELA 124
Query: 237 SGLMYLH 243
L Y H
Sbjct: 125 DALHYCH 131
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 49/121 (40%), Gaps = 8/121 (6%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
R +G G +G V L R A+K K+ L K V +RREV I L+H
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE------HQLRREVEIQSHLRH 70
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
PNI+ L D + Y++LEY + E Y+ ++ + L Y H
Sbjct: 71 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 244 G 244
Sbjct: 129 S 129
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 49/121 (40%), Gaps = 8/121 (6%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
R +G G +G V L R A+K K+ L K V +RREV I L+H
Sbjct: 13 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE------HQLRREVEIQSHLRH 66
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
PNI+ L D + Y++LEY + E Y+ ++ + L Y H
Sbjct: 67 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 124
Query: 244 G 244
Sbjct: 125 S 125
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 49/121 (40%), Gaps = 8/121 (6%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
R +G G +G V L R A+K K+ L K V +RREV I L+H
Sbjct: 18 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE------HQLRREVEIQSHLRH 71
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
PNI+ L D + Y++LEY + E Y+ ++ + L Y H
Sbjct: 72 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 129
Query: 244 G 244
Sbjct: 130 S 130
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 49/121 (40%), Gaps = 8/121 (6%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
R +G G +G V L R A+K K+ L K V +RREV I L+H
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE------HQLRREVEIQSHLRH 67
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
PNI+ L D + Y++LEY + E Y+ ++ + L Y H
Sbjct: 68 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 244 G 244
Sbjct: 126 S 126
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 49/121 (40%), Gaps = 8/121 (6%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
R +G G +G V L R A+K K+ L K V +RREV I L+H
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE------HQLRREVEIQSHLRH 67
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
PNI+ L D + Y++LEY + E Y+ ++ + L Y H
Sbjct: 68 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 244 G 244
Sbjct: 126 S 126
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 49/121 (40%), Gaps = 8/121 (6%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
R +G G +G V L R A+K K+ L K V +RREV I L+H
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE------HQLRREVEIQSHLRH 70
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
PNI+ L D + Y++LEY + E Y+ ++ + L Y H
Sbjct: 71 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 244 G 244
Sbjct: 129 S 129
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 49/121 (40%), Gaps = 8/121 (6%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
R +G G +G V L R A+K K+ L K V +RREV I L+H
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE------HQLRREVEIQSHLRH 67
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
PNI+ L D + Y++LEY + E Y+ ++ + L Y H
Sbjct: 68 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 244 G 244
Sbjct: 126 S 126
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 49/121 (40%), Gaps = 8/121 (6%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
R +G G +G V L R A+K K+ L K V +RREV I L+H
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE------HQLRREVEIQSHLRH 70
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
PNI+ L D + Y++LEY + E Y+ ++ + L Y H
Sbjct: 71 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 244 G 244
Sbjct: 129 S 129
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 58/128 (45%), Gaps = 19/128 (14%)
Query: 125 KIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHP 184
++G G +G V+ + G+ AIK + ++P + E+ IMK L HP
Sbjct: 21 RLGTGGFGYVLRWIHQDTGEQVAIKQCRQE------LSPKNRERWCL--EIQIMKKLNHP 72
Query: 185 NIVNLIEVID-----DPNSDHFYMVLEYVEG----KWDNDGFGQPGAIGESMARKYLRDI 235
N+V+ EV D PN D + +EY EG K+ N F + E R L DI
Sbjct: 73 NVVSAREVPDGLQKLAPN-DLPLLAMEYCEGGDLRKYLNQ-FENCCGLKEGPIRTLLSDI 130
Query: 236 VSGLMYLH 243
S L YLH
Sbjct: 131 SSALRYLH 138
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 58/128 (45%), Gaps = 19/128 (14%)
Query: 125 KIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHP 184
++G G +G V+ + G+ AIK + ++P + E+ IMK L HP
Sbjct: 22 RLGTGGFGYVLRWIHQDTGEQVAIKQCRQE------LSPKNRERWCL--EIQIMKKLNHP 73
Query: 185 NIVNLIEVID-----DPNSDHFYMVLEYVEG----KWDNDGFGQPGAIGESMARKYLRDI 235
N+V+ EV D PN D + +EY EG K+ N F + E R L DI
Sbjct: 74 NVVSAREVPDGLQKLAPN-DLPLLAMEYCEGGDLRKYLNQ-FENCCGLKEGPIRTLLSDI 131
Query: 236 VSGLMYLH 243
S L YLH
Sbjct: 132 SSALRYLH 139
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 49/121 (40%), Gaps = 8/121 (6%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
R +G G +G V L R A+K K+ L K V +RREV I L+H
Sbjct: 18 RPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVE------HQLRREVEIQSHLRH 71
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
PNI+ L D + Y++LEY + E Y+ ++ + L Y H
Sbjct: 72 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCH 129
Query: 244 G 244
Sbjct: 130 S 130
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 49/121 (40%), Gaps = 8/121 (6%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
R +G G +G V L R A+K K+ L K V +RREV I L+H
Sbjct: 18 RPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVE------HQLRREVEIQSHLRH 71
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
PNI+ L D + Y++LEY + E Y+ ++ + L Y H
Sbjct: 72 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCH 129
Query: 244 G 244
Sbjct: 130 S 130
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 49/121 (40%), Gaps = 8/121 (6%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
R +G G +G V L R A+K K+ L K V +RREV I L+H
Sbjct: 11 RPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVE------HQLRREVEIQSHLRH 64
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
PNI+ L D + Y++LEY + E Y+ ++ + L Y H
Sbjct: 65 PNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 122
Query: 244 G 244
Sbjct: 123 S 123
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 59/128 (46%), Gaps = 12/128 (9%)
Query: 117 INEYVHVR-KIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREV 175
IN+Y + IG GS+G+V + A K K + + ++E+
Sbjct: 24 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDV---------DRFKQEI 74
Query: 176 LIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
IMK L HPNI+ L E +D N+D Y+V+E G + ES A + ++D+
Sbjct: 75 EIMKSLDHPNIIRLYETFED-NTD-IYLVMELCTGGELFERVVHKRVFRESDAARIMKDV 132
Query: 236 VSGLMYLH 243
+S + Y H
Sbjct: 133 LSAVAYCH 140
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 59/128 (46%), Gaps = 12/128 (9%)
Query: 117 INEYVHVR-KIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREV 175
IN+Y + IG GS+G+V + A K K + + ++E+
Sbjct: 7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDV---------DRFKQEI 57
Query: 176 LIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
IMK L HPNI+ L E +D N+D Y+V+E G + ES A + ++D+
Sbjct: 58 EIMKSLDHPNIIRLYETFED-NTD-IYLVMELCTGGELFERVVHKRVFRESDAARIMKDV 115
Query: 236 VSGLMYLH 243
+S + Y H
Sbjct: 116 LSAVAYCH 123
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 15/111 (13%)
Query: 135 VLYRSSLDG--KHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEV 192
++YR G K YA+K K+ K+ VR E+ ++ L HPNI+ L E+
Sbjct: 68 IVYRCKQKGTQKPYALKVLKKTVDKKI-----------VRTEIGVLLRLSHPNIIKLKEI 116
Query: 193 IDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
+ P +VLE V G D + G E A ++ I+ + YLH
Sbjct: 117 FETPT--EISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLH 165
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 7/92 (7%)
Query: 119 EYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIM 178
+Y + IG GSYG+ R DGK K +++ +E M + EV ++
Sbjct: 7 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTE-----AEKQM--LVSEVNLL 59
Query: 179 KMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEG 210
+ L+HPNIV + I D + Y+V+EY EG
Sbjct: 60 RELKHPNIVRYYDRIIDRTNTTLYIVMEYCEG 91
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 70/135 (51%), Gaps = 17/135 (12%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
+++Y + KIG G++G+V R G+ A+K K + + TA+ RE+
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALK---KVLMENEKEGFPITAL----REIK 69
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDH------FYMVLEYVEGKWDNDGFGQPGAIGESMA-- 228
I+++L+H N+VNLIE+ S + Y+V ++ E D G + +++
Sbjct: 70 ILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH--DLAGLLSNVLVKFTLSEI 127
Query: 229 RKYLRDIVSGLMYLH 243
++ ++ +++GL Y+H
Sbjct: 128 KRVMQMLLNGLYYIH 142
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 7/92 (7%)
Query: 119 EYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIM 178
+Y + IG GSYG+ R DGK K +++ +E M + EV ++
Sbjct: 7 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTE-----AEKQM--LVSEVNLL 59
Query: 179 KMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEG 210
+ L+HPNIV + I D + Y+V+EY EG
Sbjct: 60 RELKHPNIVRYYDRIIDRTNTTLYIVMEYCEG 91
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 7/92 (7%)
Query: 119 EYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIM 178
+Y + IG GSYG+ R DGK K +++ +E M + EV ++
Sbjct: 7 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTE-----AEKQM--LVSEVNLL 59
Query: 179 KMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEG 210
+ L+HPNIV + I D + Y+V+EY EG
Sbjct: 60 RELKHPNIVRYYDRIIDRTNTTLYIVMEYCEG 91
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 70/135 (51%), Gaps = 17/135 (12%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
+++Y + KIG G++G+V R G+ A+K K + + TA+ RE+
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALK---KVLMENEKEGFPITAL----REIK 69
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDH------FYMVLEYVEGKWDNDGFGQPGAIGESMA-- 228
I+++L+H N+VNLIE+ S + Y+V ++ E D G + +++
Sbjct: 70 ILQLLKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEH--DLAGLLSNVLVKFTLSEI 127
Query: 229 RKYLRDIVSGLMYLH 243
++ ++ +++GL Y+H
Sbjct: 128 KRVMQMLLNGLYYIH 142
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 55/122 (45%), Gaps = 11/122 (9%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
IG GSYG V L+ + AIK LRV + RE+ I+ L H +
Sbjct: 61 IGTGSYGHVCEAYDKLEKRVVAIKKI-------LRVFEDLIDCKRILREIAILNRLNHDH 113
Query: 186 IVNLIEVI---DDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYL 242
+V +++++ D D Y+VLE + + F P + E + L +++ G+ Y+
Sbjct: 114 VVKVLDIVIPKDVEKFDELYVVLEIADSDF-KKLFRTPVYLTELHIKTLLYNLLVGVKYV 172
Query: 243 HG 244
H
Sbjct: 173 HS 174
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 70/135 (51%), Gaps = 17/135 (12%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
+++Y + KIG G++G+V R G+ A+K K + + TA+ RE+
Sbjct: 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALK---KVLMENEKEGFPITAL----REIK 68
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDH------FYMVLEYVEGKWDNDGFGQPGAIGESMA-- 228
I+++L+H N+VNLIE+ S + Y+V ++ E D G + +++
Sbjct: 69 ILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH--DLAGLLSNVLVKFTLSEI 126
Query: 229 RKYLRDIVSGLMYLH 243
++ ++ +++GL Y+H
Sbjct: 127 KRVMQMLLNGLYYIH 141
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 70/135 (51%), Gaps = 17/135 (12%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
+++Y + KIG G++G+V R G+ A+K K + + TA+ RE+
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALK---KVLMENEKEGFPITAL----REIK 69
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDH------FYMVLEYVEGKWDNDGFGQPGAIGESMA-- 228
I+++L+H N+VNLIE+ S + Y+V ++ E D G + +++
Sbjct: 70 ILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH--DLAGLLSNVLVKFTLSEI 127
Query: 229 RKYLRDIVSGLMYLH 243
++ ++ +++GL Y+H
Sbjct: 128 KRVMQMLLNGLYYIH 142
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 62/140 (44%), Gaps = 11/140 (7%)
Query: 113 GTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVR 172
G+ + Y V +IG G+YG V R G A+K+ + ++ VR
Sbjct: 4 GSMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGG---GGLPISTVR 60
Query: 173 REVLI--MKMLQHPNIVNLIEVIDDPNSDH---FYMVLEYVEGKWDN--DGFGQPGAIGE 225
L+ ++ +HPN+V L++V +D +V E+V+ D PG E
Sbjct: 61 EVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAE 120
Query: 226 SMARKYLRDIVSGLMYLHGH 245
++ + +R + GL +LH +
Sbjct: 121 TI-KDLMRQFLRGLDFLHAN 139
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 55/119 (46%), Gaps = 12/119 (10%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ-HP 184
+G G+Y KV S +GK YA+K K + + + V REV + Q +
Sbjct: 21 LGEGAYAKVQGAVSLQNGKEYAVKIIEKQ---------AGHSRSRVFREVETLYQCQGNK 71
Query: 185 NIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
NI+ LIE +D FY+V E ++G + E A + +RD+ + L +LH
Sbjct: 72 NILELIEFFED--DTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLH 128
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 60/132 (45%), Gaps = 10/132 (7%)
Query: 113 GTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVR 172
+ ++ V+ +G G+YG+V L + + + A+K + +++
Sbjct: 1 AVPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR--------AVDCPENIK 52
Query: 173 REVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYL 232
+E+ I KML H N+V + N Y+ LEY G D + E A+++
Sbjct: 53 KEICINKMLNHENVVKFYGHRREGNIQ--YLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 110
Query: 233 RDIVSGLMYLHG 244
+++G++YLHG
Sbjct: 111 HQLMAGVVYLHG 122
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 48/86 (55%), Gaps = 8/86 (9%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLR-VAPSETAMTDVRREVLIMKMLQHP 184
IG GSYG V R +++ + AI+A + +K+R + P + + ++ EV +MK L HP
Sbjct: 34 IGQGSYGVV---RVAIENQTRAIRAIKIMNKNKIRQINPKD--VERIKTEVRLMKKLHHP 88
Query: 185 NIVNLIEVIDDPNSDHFYMVLEYVEG 210
NI L EV +D + +V+E G
Sbjct: 89 NIARLYEVYED--EQYICLVMELCHG 112
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 60/132 (45%), Gaps = 10/132 (7%)
Query: 113 GTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVR 172
+ ++ V+ +G G+YG+V L + + + A+K + +++
Sbjct: 1 AVPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR--------AVDCPENIK 52
Query: 173 REVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYL 232
+E+ I KML H N+V + N Y+ LEY G D + E A+++
Sbjct: 53 KEICINKMLNHENVVKFYGHRREGNIQ--YLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 110
Query: 233 RDIVSGLMYLHG 244
+++G++YLHG
Sbjct: 111 HQLMAGVVYLHG 122
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 60/132 (45%), Gaps = 10/132 (7%)
Query: 113 GTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVR 172
+ ++ V+ +G G+YG+V L + + + A+K + +++
Sbjct: 2 AVPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR--------AVDCPENIK 53
Query: 173 REVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYL 232
+E+ I KML H N+V + N Y+ LEY G D + E A+++
Sbjct: 54 KEICINKMLNHENVVKFYGHRREGNIQ--YLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 111
Query: 233 RDIVSGLMYLHG 244
+++G++YLHG
Sbjct: 112 HQLMAGVVYLHG 123
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 60/132 (45%), Gaps = 10/132 (7%)
Query: 113 GTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVR 172
+ ++ V+ +G G+YG+V L + + + A+K + +++
Sbjct: 1 AVPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR--------AVDCPENIK 52
Query: 173 REVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYL 232
+E+ I KML H N+V + N Y+ LEY G D + E A+++
Sbjct: 53 KEICINKMLNHENVVKFYGHRREGNIQ--YLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 110
Query: 233 RDIVSGLMYLHG 244
+++G++YLHG
Sbjct: 111 HQLMAGVVYLHG 122
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 60/132 (45%), Gaps = 10/132 (7%)
Query: 113 GTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVR 172
+ ++ V+ +G G+YG+V L + + + A+K + +++
Sbjct: 1 AVPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR--------AVDCPENIK 52
Query: 173 REVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYL 232
+E+ I KML H N+V + N Y+ LEY G D + E A+++
Sbjct: 53 KEICINKMLNHENVVKFYGHRREGNIQ--YLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 110
Query: 233 RDIVSGLMYLHG 244
+++G++YLHG
Sbjct: 111 HQLMAGVVYLHG 122
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 60/132 (45%), Gaps = 10/132 (7%)
Query: 113 GTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVR 172
+ ++ V+ +G G+YG+V L + + + A+K + +++
Sbjct: 2 AVPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR--------AVDCPENIK 53
Query: 173 REVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYL 232
+E+ I KML H N+V + N Y+ LEY G D + E A+++
Sbjct: 54 KEICINKMLNHENVVKFYGHRREGNIQ--YLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 111
Query: 233 RDIVSGLMYLHG 244
+++G++YLHG
Sbjct: 112 HQLMAGVVYLHG 123
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 60/132 (45%), Gaps = 10/132 (7%)
Query: 113 GTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVR 172
+ ++ V+ +G G+YG+V L + + + A+K + +++
Sbjct: 2 AVPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR--------AVDCPENIK 53
Query: 173 REVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYL 232
+E+ I KML H N+V + N Y+ LEY G D + E A+++
Sbjct: 54 KEICINKMLNHENVVKFYGHRREGNIQ--YLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 111
Query: 233 RDIVSGLMYLHG 244
+++G++YLHG
Sbjct: 112 HQLMAGVVYLHG 123
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 60/132 (45%), Gaps = 10/132 (7%)
Query: 113 GTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVR 172
+ ++ V+ +G G+YG+V L + + + A+K + +++
Sbjct: 2 AVPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR--------AVDCPENIK 53
Query: 173 REVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYL 232
+E+ I KML H N+V + N Y+ LEY G D + E A+++
Sbjct: 54 KEICINKMLNHENVVKFYGHRREGNIQ--YLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 111
Query: 233 RDIVSGLMYLHG 244
+++G++YLHG
Sbjct: 112 HQLMAGVVYLHG 123
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 60/132 (45%), Gaps = 10/132 (7%)
Query: 113 GTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVR 172
+ ++ V+ +G G+YG+V L + + + A+K + +++
Sbjct: 1 AVPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR--------AVDCPENIK 52
Query: 173 REVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYL 232
+E+ I KML H N+V + N Y+ LEY G D + E A+++
Sbjct: 53 KEICINKMLNHENVVKFYGHRREGNIQ--YLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 110
Query: 233 RDIVSGLMYLHG 244
+++G++YLHG
Sbjct: 111 HQLMAGVVYLHG 122
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 60/132 (45%), Gaps = 10/132 (7%)
Query: 113 GTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVR 172
+ ++ V+ +G G+YG+V L + + + A+K + +++
Sbjct: 1 AVPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR--------AVDCPENIK 52
Query: 173 REVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYL 232
+E+ I KML H N+V + N Y+ LEY G D + E A+++
Sbjct: 53 KEICINKMLNHENVVKFYGHRREGNIQ--YLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 110
Query: 233 RDIVSGLMYLHG 244
+++G++YLHG
Sbjct: 111 HQLMAGVVYLHG 122
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 60/132 (45%), Gaps = 10/132 (7%)
Query: 113 GTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVR 172
+ ++ V+ +G G+YG+V L + + + A+K + +++
Sbjct: 2 AVPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR--------AVDCPENIK 53
Query: 173 REVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYL 232
+E+ I KML H N+V + N Y+ LEY G D + E A+++
Sbjct: 54 KEICINKMLNHENVVKFYGHRREGNIQ--YLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 111
Query: 233 RDIVSGLMYLHG 244
+++G++YLHG
Sbjct: 112 HQLMAGVVYLHG 123
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 60/132 (45%), Gaps = 10/132 (7%)
Query: 113 GTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVR 172
+ ++ V+ +G G+YG+V L + + + A+K + +++
Sbjct: 2 AVPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR--------AVDCPENIK 53
Query: 173 REVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYL 232
+E+ I KML H N+V + N Y+ LEY G D + E A+++
Sbjct: 54 KEICINKMLNHENVVKFYGHRREGNIQ--YLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 111
Query: 233 RDIVSGLMYLHG 244
+++G++YLHG
Sbjct: 112 HQLMAGVVYLHG 123
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 63/137 (45%), Gaps = 18/137 (13%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMT-DVRREVL 176
+ Y V +IG G+YG V R G A+K+ +RV E + REV
Sbjct: 4 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKS--------VRVPNGEEGLPISTVREVA 55
Query: 177 IMKML---QHPNIVNLIEVIDDPNSDH---FYMVLEYVEGKWDN--DGFGQPGAIGESMA 228
+++ L +HPN+V L++V +D +V E+V+ D PG E++
Sbjct: 56 LLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETI- 114
Query: 229 RKYLRDIVSGLMYLHGH 245
+ +R + GL +LH +
Sbjct: 115 KDLMRQFLRGLDFLHAN 131
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 63/137 (45%), Gaps = 18/137 (13%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMT-DVRREVL 176
+ Y V +IG G+YG V R G A+K+ +RV E + REV
Sbjct: 4 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKS--------VRVPNGEEGLPISTVREVA 55
Query: 177 IMKML---QHPNIVNLIEVIDDPNSDH---FYMVLEYVEGKWDN--DGFGQPGAIGESMA 228
+++ L +HPN+V L++V +D +V E+V+ D PG E++
Sbjct: 56 LLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETI- 114
Query: 229 RKYLRDIVSGLMYLHGH 245
+ +R + GL +LH +
Sbjct: 115 KDLMRQFLRGLDFLHAN 131
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 63/137 (45%), Gaps = 18/137 (13%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMT-DVRREVL 176
+ Y V +IG G+YG V R G A+K+ +RV E + REV
Sbjct: 4 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKS--------VRVPNGEEGLPISTVREVA 55
Query: 177 IMKML---QHPNIVNLIEVIDDPNSDH---FYMVLEYVEGKWDN--DGFGQPGAIGESMA 228
+++ L +HPN+V L++V +D +V E+V+ D PG E++
Sbjct: 56 LLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETI- 114
Query: 229 RKYLRDIVSGLMYLHGH 245
+ +R + GL +LH +
Sbjct: 115 KDLMRQFLRGLDFLHAN 131
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 60/129 (46%), Gaps = 10/129 (7%)
Query: 116 MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREV 175
+ ++ V+ +G G+YG+V L + + + A+K + ++++E+
Sbjct: 3 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR--------AVDCPENIKKEI 54
Query: 176 LIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
I KML H N+V + N Y+ LEY G D + E A+++ +
Sbjct: 55 CINKMLNHENVVKFYGHRREGNIQ--YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL 112
Query: 236 VSGLMYLHG 244
++G++YLHG
Sbjct: 113 MAGVVYLHG 121
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 60/132 (45%), Gaps = 10/132 (7%)
Query: 113 GTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVR 172
+ ++ V+ +G G+YG+V L + + + A+K + +++
Sbjct: 1 AVPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR--------AVDCPENIK 52
Query: 173 REVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYL 232
+E+ I KML H N+V + N Y+ LEY G D + E A+++
Sbjct: 53 KEICINKMLNHENVVKFYGHRREGNIQ--YLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 110
Query: 233 RDIVSGLMYLHG 244
+++G++YLHG
Sbjct: 111 HQLMAGVVYLHG 122
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 60/132 (45%), Gaps = 10/132 (7%)
Query: 113 GTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVR 172
+ ++ V+ +G G+YG+V L + + + A+K + +++
Sbjct: 1 AVPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR--------AVDCPENIK 52
Query: 173 REVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYL 232
+E+ I KML H N+V + N Y+ LEY G D + E A+++
Sbjct: 53 KEIXINKMLNHENVVKFYGHRREGNIQ--YLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 110
Query: 233 RDIVSGLMYLHG 244
+++G++YLHG
Sbjct: 111 HQLMAGVVYLHG 122
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 54/118 (45%), Gaps = 10/118 (8%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
+G G++ +V+L K AIK K L E + E+ ++ ++HPN
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKKAL--------EGKEGSMENEIAVLHKIKHPN 77
Query: 186 IVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
IV L ++ + + H Y++++ V G D + G E A + + ++ + YLH
Sbjct: 78 IVALDDIYE--SGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLH 133
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 60/132 (45%), Gaps = 10/132 (7%)
Query: 113 GTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVR 172
+ ++ V+ +G G+YG+V L + + + A+K + +++
Sbjct: 1 AVPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR--------AVDCPENIK 52
Query: 173 REVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYL 232
+E+ I KML H N+V + N Y+ LEY G D + E A+++
Sbjct: 53 KEICINKMLNHENVVKFYGHRREGNIQ--YLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 110
Query: 233 RDIVSGLMYLHG 244
+++G++YLHG
Sbjct: 111 HQLMAGVVYLHG 122
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 54/118 (45%), Gaps = 10/118 (8%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
+G G++ +V+L K AIK K L E + E+ ++ ++HPN
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEAL--------EGKEGSMENEIAVLHKIKHPN 77
Query: 186 IVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
IV L ++ + + H Y++++ V G D + G E A + + ++ + YLH
Sbjct: 78 IVALDDIYE--SGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLH 133
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 54/118 (45%), Gaps = 10/118 (8%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
+G G++ +V+L K AIK K L E + E+ ++ ++HPN
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEAL--------EGKEGSMENEIAVLHKIKHPN 77
Query: 186 IVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
IV L ++ + + H Y++++ V G D + G E A + + ++ + YLH
Sbjct: 78 IVALDDIYE--SGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLH 133
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 60/132 (45%), Gaps = 10/132 (7%)
Query: 113 GTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVR 172
+ ++ V+ +G G+YG+V L + + + A+K + +++
Sbjct: 1 AVPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR--------AVDCPENIK 52
Query: 173 REVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYL 232
+E+ I KML H N+V + N Y+ LEY G D + E A+++
Sbjct: 53 KEIXINKMLNHENVVKFYGHRREGNIQ--YLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 110
Query: 233 RDIVSGLMYLHG 244
+++G++YLHG
Sbjct: 111 HQLMAGVVYLHG 122
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 60/132 (45%), Gaps = 10/132 (7%)
Query: 113 GTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVR 172
+ ++ V+ +G G+YG+V L + + + A+K + +++
Sbjct: 1 AVPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR--------AVDCPENIK 52
Query: 173 REVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYL 232
+E+ I KML H N+V + N Y+ LEY G D + E A+++
Sbjct: 53 KEICINKMLNHENVVKFYGHRREGNIQ--YLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 110
Query: 233 RDIVSGLMYLHG 244
+++G++YLHG
Sbjct: 111 HQLMAGVVYLHG 122
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 54/118 (45%), Gaps = 10/118 (8%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
+G G++ +V+L K AIK K L E + E+ ++ ++HPN
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEAL--------EGKEGSMENEIAVLHKIKHPN 77
Query: 186 IVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
IV L ++ + + H Y++++ V G D + G E A + + ++ + YLH
Sbjct: 78 IVALDDIYE--SGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLH 133
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 60/132 (45%), Gaps = 10/132 (7%)
Query: 113 GTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVR 172
+ ++ V+ +G G+YG+V L + + + A+K + +++
Sbjct: 2 AVPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR--------AVDCPENIK 53
Query: 173 REVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYL 232
+E+ I KML H N+V + N Y+ LEY G D + E A+++
Sbjct: 54 KEIXINKMLNHENVVKFYGHRREGNIQ--YLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 111
Query: 233 RDIVSGLMYLHG 244
+++G++YLHG
Sbjct: 112 HQLMAGVVYLHG 123
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 56/126 (44%), Gaps = 9/126 (7%)
Query: 119 EYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIM 178
+Y V+ IG G++G+V L R K YA+K K + K S++A R+ IM
Sbjct: 70 DYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKR----SDSAFFWEERD--IM 123
Query: 179 KMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSG 238
P +V L D + YMV+EY+ G D + E AR Y ++V
Sbjct: 124 AFANSPWVVQLFYAFQDDR--YLYMVMEYMPGG-DLVNLMSNYDVPEKWARFYTAEVVLA 180
Query: 239 LMYLHG 244
L +H
Sbjct: 181 LDAIHS 186
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 56/126 (44%), Gaps = 9/126 (7%)
Query: 119 EYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIM 178
+Y V+ IG G++G+V L R K YA+K K + K S++A R+ IM
Sbjct: 75 DYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIK----RSDSAFFWEERD--IM 128
Query: 179 KMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSG 238
P +V L D + YMV+EY+ G D + E AR Y ++V
Sbjct: 129 AFANSPWVVQLFYAFQDDR--YLYMVMEYMPGG-DLVNLMSNYDVPEKWARFYTAEVVLA 185
Query: 239 LMYLHG 244
L +H
Sbjct: 186 LDAIHS 191
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 56/126 (44%), Gaps = 9/126 (7%)
Query: 119 EYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIM 178
+Y V+ IG G++G+V L R K YA+K K + K S++A R+ IM
Sbjct: 75 DYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKR----SDSAFFWEERD--IM 128
Query: 179 KMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSG 238
P +V L D + YMV+EY+ G D + E AR Y ++V
Sbjct: 129 AFANSPWVVQLFYAFQDDR--YLYMVMEYMPGG-DLVNLMSNYDVPEKWARFYTAEVVLA 185
Query: 239 LMYLHG 244
L +H
Sbjct: 186 LDAIHS 191
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 51/107 (47%), Gaps = 13/107 (12%)
Query: 109 EDENGT--KMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSET 166
+D N T ++ YV +G+G+YG V G+ AIK R SE
Sbjct: 31 QDVNKTAWELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLS-------RPFQSEI 83
Query: 167 AMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDH----FYMVLEYVE 209
RE+L++K +QH N++ L++V +S FY+V+ +++
Sbjct: 84 FAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQ 130
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 60/133 (45%), Gaps = 15/133 (11%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTD----VRR 173
NE + ++IG G +G V R D AIK+ L + ET M + +R
Sbjct: 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSL------ILGDSEGETEMIEKFQEFQR 72
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVE-GKWDNDGFGQPGAIGESMARKYL 232
EV IM L HPNIV L ++ +P MV+E+V G + + I S+ + +
Sbjct: 73 EVFIMSNLNHPNIVKLYGLMHNPPR----MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLM 128
Query: 233 RDIVSGLMYLHGH 245
DI G+ Y+
Sbjct: 129 LDIALGIEYMQNQ 141
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 56/127 (44%), Gaps = 10/127 (7%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
+ Y+ + K+G G+Y V +S L A+K ++R+ E A REV
Sbjct: 1 METYIKLDKLGEGTYATVYKGKSKLTDNLVALK--------EIRLEHEEGAPCTAIREVS 52
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
++K L+H NIV L ++I S +V EY++ I + +L ++
Sbjct: 53 LLKDLKHANIVTLHDIIHTEKS--LTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLL 110
Query: 237 SGLMYLH 243
GL Y H
Sbjct: 111 RGLAYCH 117
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 60/133 (45%), Gaps = 15/133 (11%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTD----VRR 173
NE + ++IG G +G V R D AIK+ L + ET M + +R
Sbjct: 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSL------ILGDSEGETEMIEKFQEFQR 72
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVE-GKWDNDGFGQPGAIGESMARKYL 232
EV IM L HPNIV L ++ +P MV+E+V G + + I S+ + +
Sbjct: 73 EVFIMSNLNHPNIVKLYGLMHNPPR----MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLM 128
Query: 233 RDIVSGLMYLHGH 245
DI G+ Y+
Sbjct: 129 LDIALGIEYMQNQ 141
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 60/133 (45%), Gaps = 15/133 (11%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTD----VRR 173
NE + ++IG G +G V R D AIK+ L + ET M + +R
Sbjct: 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSL------ILGDSEGETEMIEKFQEFQR 72
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVE-GKWDNDGFGQPGAIGESMARKYL 232
EV IM L HPNIV L ++ +P MV+E+V G + + I S+ + +
Sbjct: 73 EVFIMSNLNHPNIVKLYGLMHNPPR----MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLM 128
Query: 233 RDIVSGLMYLHGH 245
DI G+ Y+
Sbjct: 129 LDIALGIEYMQNQ 141
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 51/107 (47%), Gaps = 13/107 (12%)
Query: 109 EDENGT--KMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSET 166
+D N T ++ YV +G+G+YG V G+ AIK R SE
Sbjct: 13 QDVNKTAWELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLS-------RPFQSEI 65
Query: 167 AMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDH----FYMVLEYVE 209
RE+L++K +QH N++ L++V +S FY+V+ +++
Sbjct: 66 FAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQ 112
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 57/128 (44%), Gaps = 10/128 (7%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
I+ Y + K+G G+YG+V ++ + AIK H E REV
Sbjct: 33 IDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEH-------EEEGVPGTAIREVS 85
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
++K LQH NI+ L VI ++ +++ EY E P + + + +L ++
Sbjct: 86 LLKELQHRNIIELKSVIH--HNHRLHLIFEYAENDLKKYMDKNPD-VSMRVIKSFLYQLI 142
Query: 237 SGLMYLHG 244
+G+ + H
Sbjct: 143 NGVNFCHS 150
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 59/132 (44%), Gaps = 10/132 (7%)
Query: 113 GTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVR 172
+ ++ V+ +G G+YG+V L + + + A+K + +++
Sbjct: 2 AVPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR--------AVDCPENIK 53
Query: 173 REVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYL 232
+E+ I ML H N+V + N Y+ LEY G D + E A+++
Sbjct: 54 KEICINAMLNHENVVKFYGHRREGNIQ--YLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 111
Query: 233 RDIVSGLMYLHG 244
+++G++YLHG
Sbjct: 112 HQLMAGVVYLHG 123
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 59/124 (47%), Gaps = 19/124 (15%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
+G G+ V R G +AIK F +++S LR P + M RE ++K L H N
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVF--NNISFLR--PVDVQM----REFEVLKKLNHKN 68
Query: 186 IVNLIEVIDDPNSDHFYMVLE-------YVEGKWDNDGFGQPGAIGESMARKYLRDIVSG 238
IV L + ++ + H +++E Y + ++ +G P ES LRD+V G
Sbjct: 69 IVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLP----ESEFLIVLRDVVGG 124
Query: 239 LMYL 242
+ +L
Sbjct: 125 MNHL 128
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 56/125 (44%), Gaps = 9/125 (7%)
Query: 119 EYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIM 178
+Y V+ IG G++G+V L R K YA+K K + K S++A R+ IM
Sbjct: 76 DYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKR----SDSAFFWEERD--IM 129
Query: 179 KMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSG 238
P +V L D + YMV+EY+ G D + E A+ Y ++V
Sbjct: 130 AFANSPWVVQLFCAFQD--DKYLYMVMEYMPGG-DLVNLMSNYDVPEKWAKFYTAEVVLA 186
Query: 239 LMYLH 243
L +H
Sbjct: 187 LDAIH 191
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 59/124 (47%), Gaps = 19/124 (15%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
+G G+ V R G +AIK F +++S LR P + M RE ++K L H N
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVF--NNISFLR--PVDVQM----REFEVLKKLNHKN 68
Query: 186 IVNLIEVIDDPNSDHFYMVLE-------YVEGKWDNDGFGQPGAIGESMARKYLRDIVSG 238
IV L + ++ + H +++E Y + ++ +G P ES LRD+V G
Sbjct: 69 IVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLP----ESEFLIVLRDVVGG 124
Query: 239 LMYL 242
+ +L
Sbjct: 125 MNHL 128
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 64/129 (49%), Gaps = 14/129 (10%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLD-GKHYAIKAFHKSHLSKLRVAPSETAMTDVR-RE 174
+ +Y + KIG G+YG V+Y++ + G+ +A+K K+R+ + + RE
Sbjct: 1 MEKYHGLEKIGEGTYG--VVYKAQNNYGETFALK--------KIRLEKEDEGIPSTTIRE 50
Query: 175 VLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRD 234
+ I+K L+H NIV L +VI +V E+++ G + A+ +L
Sbjct: 51 ISILKELKHSNIVKLYDVIH--TKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQ 108
Query: 235 IVSGLMYLH 243
+++G+ Y H
Sbjct: 109 LLNGIAYCH 117
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 56/127 (44%), Gaps = 13/127 (10%)
Query: 123 VRKIGAGSYGKVVLY----RSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIM 178
+R +G G +GKV LY + G+ A+KA + +LR + +RE+ I+
Sbjct: 14 IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLR--------SGWQREIEIL 65
Query: 179 KMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSG 238
+ L H +IV +D +V+EYV D + +G + + + I G
Sbjct: 66 RTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPR-HCVGLAQLLLFAQQICEG 124
Query: 239 LMYLHGH 245
+ YLH
Sbjct: 125 MAYLHAQ 131
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 56/127 (44%), Gaps = 13/127 (10%)
Query: 123 VRKIGAGSYGKVVLY----RSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIM 178
+R +G G +GKV LY + G+ A+KA + +LR + +RE+ I+
Sbjct: 13 IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLR--------SGWQREIEIL 64
Query: 179 KMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSG 238
+ L H +IV +D +V+EYV D + +G + + + I G
Sbjct: 65 RTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPR-HCVGLAQLLLFAQQICEG 123
Query: 239 LMYLHGH 245
+ YLH
Sbjct: 124 MAYLHAQ 130
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 40.4 bits (93), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 70/159 (44%), Gaps = 24/159 (15%)
Query: 103 NKLIRSEDENGTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVA 162
NK ++ +D K IN+Y +R + G + K++L D K YA+K + KS L K R
Sbjct: 20 NKYVKEKD----KYINDYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDF 73
Query: 163 PS--------ETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEG---- 210
++ D + E+ I+ +++ + +I N D Y++ EY+E
Sbjct: 74 TKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGII--TNYDEVYIIYEYMENDSIL 131
Query: 211 KWDNDGF----GQPGAIGESMARKYLRDIVSGLMYLHGH 245
K+D F I + + ++ +++ Y+H
Sbjct: 132 KFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNE 170
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 40.4 bits (93), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 64/129 (49%), Gaps = 14/129 (10%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLD-GKHYAIKAFHKSHLSKLRVAPSETAMTDVR-RE 174
+ +Y + KIG G+YG V+Y++ + G+ +A+K K+R+ + + RE
Sbjct: 1 MEKYHGLEKIGEGTYG--VVYKAQNNYGETFALK--------KIRLEKEDEGIPSTTIRE 50
Query: 175 VLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRD 234
+ I+K L+H NIV L +VI +V E+++ G + A+ +L
Sbjct: 51 ISILKELKHSNIVKLYDVIH--TKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQ 108
Query: 235 IVSGLMYLH 243
+++G+ Y H
Sbjct: 109 LLNGIAYCH 117
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 40.4 bits (93), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 64/129 (49%), Gaps = 14/129 (10%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLD-GKHYAIKAFHKSHLSKLRVAPSETAMTDVR-RE 174
+ +Y + KIG G+YG V+Y++ + G+ +A+K K+R+ + + RE
Sbjct: 1 MEKYHGLEKIGEGTYG--VVYKAQNNYGETFALK--------KIRLEKEDEGIPSTTIRE 50
Query: 175 VLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRD 234
+ I+K L+H NIV L +VI +V E+++ G + A+ +L
Sbjct: 51 ISILKELKHSNIVKLYDVIH--TKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQ 108
Query: 235 IVSGLMYLH 243
+++G+ Y H
Sbjct: 109 LLNGIAYCH 117
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 51/120 (42%), Gaps = 8/120 (6%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
R IGAG +G+V R L GK A + L+V +E D E IM H
Sbjct: 28 RVIGAGEFGEVCSGRLKLPGKRELPVA-----IKTLKVGYTEKQRRDFLGEASIMGQFDH 82
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVE-GKWDNDGFGQPGAIGESMARKYLRDIVSGLMYL 242
PNI++L V+ S +V EY+E G D G LR I +G+ YL
Sbjct: 83 PNIIHLEGVVT--KSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYL 140
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 59/132 (44%), Gaps = 10/132 (7%)
Query: 113 GTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVR 172
+ ++ V+ +G G+ G+V L + + + A+K + +++
Sbjct: 1 AVPFVEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKR--------AVDCPENIK 52
Query: 173 REVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYL 232
+E+ I KML H N+V + N Y+ LEY G D + E A+++
Sbjct: 53 KEICINKMLNHENVVKFYGHRREGNIQ--YLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 110
Query: 233 RDIVSGLMYLHG 244
+++G++YLHG
Sbjct: 111 HQLMAGVVYLHG 122
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 56/126 (44%), Gaps = 6/126 (4%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y + +G G + V R + AIK H S+ + + TA+ RE+ +++
Sbjct: 12 YEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTAL----REIKLLQ 67
Query: 180 MLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGL 239
L HPNI+ L++ + + +V +++E + + S + Y+ + GL
Sbjct: 68 ELSHPNIIGLLDAFG--HKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGL 125
Query: 240 MYLHGH 245
YLH H
Sbjct: 126 EYLHQH 131
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 50/126 (39%), Gaps = 14/126 (11%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
YV IG GSY + YA+K KS + PSE ++++
Sbjct: 29 YVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKS-----KRDPSEEIE-------ILLR 76
Query: 180 MLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGL 239
QHPNI+ L +V DD H Y+V E + G D + E A L I +
Sbjct: 77 YGQHPNIITLKDVYDD--GKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTV 134
Query: 240 MYLHGH 245
YLH
Sbjct: 135 EYLHSQ 140
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 50/126 (39%), Gaps = 14/126 (11%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
YV IG GSY + YA+K KS + PSE ++++
Sbjct: 29 YVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKS-----KRDPSEEIE-------ILLR 76
Query: 180 MLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGL 239
QHPNI+ L +V DD H Y+V E + G D + E A L I +
Sbjct: 77 YGQHPNIITLKDVYDD--GKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTV 134
Query: 240 MYLHGH 245
YLH
Sbjct: 135 EYLHSQ 140
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 61/149 (40%), Gaps = 10/149 (6%)
Query: 98 PVKESNKLIRSEDENGTK---MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKS 154
P +++ I D NG + + ++ + +G GS+GKV+L + YA+K K
Sbjct: 318 PEEKTANTISKFDNNGNRDRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKD 377
Query: 155 HLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDN 214
+ + + T V + VL + + P + L D Y V+EYV G
Sbjct: 378 ----VVIQDDDVECTMVEKRVLALPG-KPPFLTQLHSCFQ--TMDRLYFVMEYVNGGDLM 430
Query: 215 DGFGQPGAIGESMARKYLRDIVSGLMYLH 243
Q G E A Y +I GL +L
Sbjct: 431 YHIQQVGRFKEPHAVFYAAEIAIGLFFLQ 459
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 64/129 (49%), Gaps = 13/129 (10%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V S++DG+ A A K + R SE RE+ ++K
Sbjct: 27 YRDLQPVGSGAYGAVC---SAVDGRTGAKVAIKKLY----RPFQSELFAKRAYRELRLLK 79
Query: 180 MLQHPNIVNLIEVI--DDPNSDH--FYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V D+ D FY+V+ ++ D + +GE + + +
Sbjct: 80 HMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGT--DLGKLMKHEKLGEDRIQFLVYQM 137
Query: 236 VSGLMYLHG 244
+ GL Y+H
Sbjct: 138 LKGLRYIHA 146
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 58/127 (45%), Gaps = 5/127 (3%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
+N++ R IG G +G+V R + GK YA+K K ++++ ET + R +
Sbjct: 187 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDK---KRIKMKQGETLALNERIMLS 243
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
++ P IV + P D +L+ + G + Q G E+ R Y +I+
Sbjct: 244 LVSTGDCPFIVCMSYAFHTP--DKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEII 301
Query: 237 SGLMYLH 243
GL ++H
Sbjct: 302 LGLEHMH 308
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 58/127 (45%), Gaps = 5/127 (3%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
+N++ R IG G +G+V R + GK YA+K K ++++ ET + R +
Sbjct: 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDK---KRIKMKQGETLALNERIMLS 244
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
++ P IV + P D +L+ + G + Q G E+ R Y +I+
Sbjct: 245 LVSTGDCPFIVCMSYAFHTP--DKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEII 302
Query: 237 SGLMYLH 243
GL ++H
Sbjct: 303 LGLEHMH 309
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 54/127 (42%), Gaps = 7/127 (5%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
+ ++ + +G GS+GKV+L + YAIK K + + + T V + VL
Sbjct: 18 LTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKD----VVIQDDDVECTMVEKRVL 73
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
+ + + P + L D Y V+EYV G Q G E A Y +I
Sbjct: 74 AL-LDKPPFLTQLHSCFQ--TVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEIS 130
Query: 237 SGLMYLH 243
GL +LH
Sbjct: 131 IGLFFLH 137
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 58/127 (45%), Gaps = 5/127 (3%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
+N++ R IG G +G+V R + GK YA+K K ++++ ET + R +
Sbjct: 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDK---KRIKMKQGETLALNERIMLS 244
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
++ P IV + P D +L+ + G + Q G E+ R Y +I+
Sbjct: 245 LVSTGDCPFIVCMSYAFHTP--DKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEII 302
Query: 237 SGLMYLH 243
GL ++H
Sbjct: 303 LGLEHMH 309
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 58/127 (45%), Gaps = 5/127 (3%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
+N++ R IG G +G+V R + GK YA+K K ++++ ET + R +
Sbjct: 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDK---KRIKMKQGETLALNERIMLS 244
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
++ P IV + P D +L+ + G + Q G E+ R Y +I+
Sbjct: 245 LVSTGDCPFIVCMSYAFHTP--DKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEII 302
Query: 237 SGLMYLH 243
GL ++H
Sbjct: 303 LGLEHMH 309
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 17/89 (19%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSE---TAMTDVRREVLIMKMLQ 182
IG G +GKV YR+ G A+KA R P E + +VR+E + ML+
Sbjct: 15 IGIGGFGKV--YRAFWIGDEVAVKA--------ARHDPDEDISQTIENVRQEAKLFAMLK 64
Query: 183 HPNIVNLIEV-IDDPNSDHFYMVLEYVEG 210
HPNI+ L V + +PN +V+E+ G
Sbjct: 65 HPNIIALRGVCLKEPN---LCLVMEFARG 90
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 56/128 (43%), Gaps = 7/128 (5%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
I +++ + +G GS+GKV L + +AIKA K + + + T V + VL
Sbjct: 16 IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKD----VVLMDDDVECTMVEKRVL 71
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
+ +HP + ++ ++ + V+EY+ G S A Y +I+
Sbjct: 72 SLAW-EHPFLTHMFCTFQ--TKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEII 128
Query: 237 SGLMYLHG 244
GL +LH
Sbjct: 129 LGLQFLHS 136
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 51/120 (42%), Gaps = 8/120 (6%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
R IGAG +G+V R L GK A + L+V +E D E IM H
Sbjct: 49 RVIGAGEFGEVCSGRLKLPGKRDVAVA-----IKTLKVGYTEKQRRDFLCEASIMGQFDH 103
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVE-GKWDNDGFGQPGAIGESMARKYLRDIVSGLMYL 242
PN+V+L V+ +V+E++E G D G LR I +G+ YL
Sbjct: 104 PNVVHLEGVVT--RGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYL 161
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 58/141 (41%), Gaps = 34/141 (24%)
Query: 124 RKIGAGSYGKVVL-----YRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIM 178
R++G G++GKV L + D A+KA P+ A D +RE ++
Sbjct: 21 RELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKD---------PTLAARKDFQREAELL 71
Query: 179 KMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGF-------------GQP----G 221
LQH +IV V D D MV EY++ D + F GQP G
Sbjct: 72 TNLQHEHIVKFYGVCGD--GDPLIMVFEYMKHG-DLNKFLRAHGPDAMILVDGQPRQAKG 128
Query: 222 AIGESMARKYLRDIVSGLMYL 242
+G S I SG++YL
Sbjct: 129 ELGLSQMLHIASQIASGMVYL 149
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 55/130 (42%), Gaps = 9/130 (6%)
Query: 114 TKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRR 173
T+ EY ++G G++ V L G+ YA + LS + R
Sbjct: 7 TRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSA-------RDHQKLER 59
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLR 233
E I ++L+HPNIV L + I + H Y++ + V G + E+ A ++
Sbjct: 60 EARICRLLKHPNIVRLHDSISE--EGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQ 117
Query: 234 DIVSGLMYLH 243
I+ +++ H
Sbjct: 118 QILEAVLHCH 127
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 54/127 (42%), Gaps = 12/127 (9%)
Query: 119 EYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIM 178
+Y KIG G+ G V G+ AI+ + K + + E+L+M
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL---------IINEILVM 71
Query: 179 KMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSG 238
+ ++PNIVN ++ D ++V+EY+ G D + + E R+ +
Sbjct: 72 RENKNPNIVNYLDSY--LVGDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQA 128
Query: 239 LMYLHGH 245
L +LH +
Sbjct: 129 LEFLHSN 135
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 57/127 (44%), Gaps = 12/127 (9%)
Query: 119 EYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIM 178
+Y KIG G+ G V G+ AI+ + L+ P + + + E+L+M
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN------LQQQPKKELIIN---EILVM 71
Query: 179 KMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSG 238
+ ++PNIVN ++ D ++V+EY+ G D + + E R+ +
Sbjct: 72 RENKNPNIVNYLDSY--LVGDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQA 128
Query: 239 LMYLHGH 245
L +LH +
Sbjct: 129 LEFLHSN 135
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 57/127 (44%), Gaps = 12/127 (9%)
Query: 119 EYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIM 178
+Y KIG G+ G V G+ AI+ + L+ P + + + E+L+M
Sbjct: 22 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN------LQQQPKKELIIN---EILVM 72
Query: 179 KMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSG 238
+ ++PNIVN ++ D ++V+EY+ G D + + E R+ +
Sbjct: 73 RENKNPNIVNYLD--SYLVGDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQA 129
Query: 239 LMYLHGH 245
L +LH +
Sbjct: 130 LEFLHSN 136
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 8/95 (8%)
Query: 116 MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREV 175
++ +Y V+K+G G+YG V G+ A+K + + T RE+
Sbjct: 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAF-------QNSTDAQRTFREI 59
Query: 176 LIMKMLQ-HPNIVNLIEVIDDPNSDHFYMVLEYVE 209
+I+ L H NIVNL+ V+ N Y+V +Y+E
Sbjct: 60 MILTELSGHENIVNLLNVLRADNDRDVYLVFDYME 94
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 57/127 (44%), Gaps = 12/127 (9%)
Query: 119 EYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIM 178
+Y KIG G+ G V G+ AI+ + L+ P + + + E+L+M
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN------LQQQPKKELIIN---EILVM 71
Query: 179 KMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSG 238
+ ++PNIVN ++ D ++V+EY+ G D + + E R+ +
Sbjct: 72 RENKNPNIVNYLD--SYLVGDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQA 128
Query: 239 LMYLHGH 245
L +LH +
Sbjct: 129 LEFLHSN 135
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 57/127 (44%), Gaps = 12/127 (9%)
Query: 119 EYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIM 178
+Y KIG G+ G V G+ AI+ + L+ P + + + E+L+M
Sbjct: 22 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN------LQQQPKKELIIN---EILVM 72
Query: 179 KMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSG 238
+ ++PNIVN ++ D ++V+EY+ G D + + E R+ +
Sbjct: 73 RENKNPNIVNYLD--SYLVGDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQA 129
Query: 239 LMYLHGH 245
L +LH +
Sbjct: 130 LEFLHSN 136
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 50/103 (48%), Gaps = 20/103 (19%)
Query: 160 RVAPSETAMTDVR------REVLIMKMLQHPNIVNLIEVI--------DDPNS----DHF 201
RVA + +TD + RE+ I++ L H NIV + E++ DD S +
Sbjct: 38 RVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSV 97
Query: 202 YMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHG 244
Y+V EY+E N + G + E AR ++ ++ GL Y+H
Sbjct: 98 YIVQEYMETDLAN--VLEQGPLLEEHARLFMYQLLRGLKYIHS 138
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 60/127 (47%), Gaps = 23/127 (18%)
Query: 89 LNGLICRQFPVKESNKLIR---SEDENGTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKH 145
LNG+ + P+ + NK+I+ S+ + G + Y + + IG GS+G VV ++
Sbjct: 10 LNGV--KLNPLDDPNKVIKVLASDGKTGEQREIAYTNCKVIGNGSFG-VVFQAKLVESDE 66
Query: 146 YAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVI----DDPNSDHF 201
AIK + K RE+ IM++++HPN+V+L D +
Sbjct: 67 VAIKKVLQDKRFK-------------NRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFL 113
Query: 202 YMVLEYV 208
+VLEYV
Sbjct: 114 NLVLEYV 120
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 60/130 (46%), Gaps = 18/130 (13%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y + ++G+G++G V++R KA + ++K P V+ E+ IM
Sbjct: 53 YDILEELGSGAFG--VVHRC-------VEKATGRVFVAKFINTPYPLDKYTVKNEISIMN 103
Query: 180 MLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGA----IGESMARKYLRDI 235
L HP ++NL + +D ++LE++ G + F + A + E+ Y+R
Sbjct: 104 QLHHPKLINLHDAFED--KYEMVLILEFLSG---GELFDRIAAEDYKMSEAEVINYMRQA 158
Query: 236 VSGLMYLHGH 245
GL ++H H
Sbjct: 159 CEGLKHMHEH 168
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 57/134 (42%), Gaps = 26/134 (19%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
++ +H +G G +G+ + G+ +K + E +EV +
Sbjct: 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKEL---------IRFDEETQRTFLKEVKV 60
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKY------ 231
M+ L+HPN++ I V+ +F + EY++G G I +SM +Y
Sbjct: 61 MRCLEHPNVLKFIGVLYKDKRLNF--ITEYIKG-------GTLRGIIKSMDSQYPWSQRV 111
Query: 232 --LRDIVSGLMYLH 243
+DI SG+ YLH
Sbjct: 112 SFAKDIASGMAYLH 125
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 40/70 (57%), Gaps = 10/70 (14%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
+++ + +G G++G+VV R++LD ++YAIK ++ +E ++ + EV++
Sbjct: 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIK----------KIRHTEEKLSTILSEVML 55
Query: 178 MKMLQHPNIV 187
+ L H +V
Sbjct: 56 LASLNHQYVV 65
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 47/106 (44%), Gaps = 10/106 (9%)
Query: 146 YAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVL 205
Y K + ++ + +T+M ++ +E+ M HPNIV+ D ++V+
Sbjct: 35 YCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSF--VVKDELWLVM 92
Query: 206 EYVEGKWDND--------GFGQPGAIGESMARKYLRDIVSGLMYLH 243
+ + G D G + G + ES LR+++ GL YLH
Sbjct: 93 KLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH 138
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 40/70 (57%), Gaps = 10/70 (14%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
+++ + +G G++G+VV R++LD ++YAIK ++ +E ++ + EV++
Sbjct: 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIK----------KIRHTEEKLSTILSEVML 55
Query: 178 MKMLQHPNIV 187
+ L H +V
Sbjct: 56 LASLNHQYVV 65
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 47/106 (44%), Gaps = 10/106 (9%)
Query: 146 YAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVL 205
Y K + ++ + +T+M ++ +E+ M HPNIV+ D ++V+
Sbjct: 30 YCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSF--VVKDELWLVM 87
Query: 206 EYVEGKWDND--------GFGQPGAIGESMARKYLRDIVSGLMYLH 243
+ + G D G + G + ES LR+++ GL YLH
Sbjct: 88 KLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH 133
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 58/130 (44%), Gaps = 9/130 (6%)
Query: 117 INEYVHVRKIGAGSYGKVVLYR--SSLD-GKHYAIKAFHKSHLSKLRVAPSETAMTDVRR 173
I + ++ +G G+YGKV L R S D GK YA+K K+ + + T T R
Sbjct: 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQ---KAKTTEHTRTER 109
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLR 233
+VL + Q P +V L H ++L+Y+ G Q E + Y+
Sbjct: 110 QVL-EHIRQSPFLVTLHYAFQTETKLH--LILDYINGGELFTHLSQRERFTEHEVQIYVG 166
Query: 234 DIVSGLMYLH 243
+IV L +LH
Sbjct: 167 EIVLALEHLH 176
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 61/131 (46%), Gaps = 15/131 (11%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
+++ + K+G G+Y V + G + A+K ++++ E + RE+ +
Sbjct: 5 SQFKQLEKLGNGTYATVYKGLNKTTGVYVALK--------EVKLDSEEGTPSTAIREISL 56
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKW----DNDGFGQ-PGAIGESMARKYL 232
MK L+H NIV L +VI N +V E+++ D+ G P + ++ + +
Sbjct: 57 MKELKHENIVRLYDVIHTENK--LTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQ 114
Query: 233 RDIVSGLMYLH 243
++ GL + H
Sbjct: 115 WQLLQGLAFCH 125
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 56/127 (44%), Gaps = 13/127 (10%)
Query: 123 VRKIGAGSYGKVVLY----RSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIM 178
+R +G G +GKV LY + G+ A+KA L+ + ++E+ I+
Sbjct: 36 IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKA--------LKADAGPQHRSGWKQEIDIL 87
Query: 179 KMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSG 238
+ L H +I+ +D + +V+EYV D + +IG + + + I G
Sbjct: 88 RTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPR-HSIGLAQLLLFAQQICEG 146
Query: 239 LMYLHGH 245
+ YLH
Sbjct: 147 MAYLHAQ 153
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 56/137 (40%), Gaps = 10/137 (7%)
Query: 110 DENGTK---MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSET 166
D NG + + ++ + +G GS+GKV+L + YA+K K + + +
Sbjct: 9 DNNGNRDRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKD----VVIQDDDV 64
Query: 167 AMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGES 226
T V + VL + + P + L D Y V+EYV G Q G E
Sbjct: 65 ECTMVEKRVLALPG-KPPFLTQLHSCFQ--TMDRLYFVMEYVNGGDLMYHIQQVGRFKEP 121
Query: 227 MARKYLRDIVSGLMYLH 243
A Y +I GL +L
Sbjct: 122 HAVFYAAEIAIGLFFLQ 138
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 56/130 (43%), Gaps = 21/130 (16%)
Query: 125 KIGAGSYGKV--VLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ 182
K+G G+YG V + D K YA+K + +S RE+ +++ L+
Sbjct: 28 KVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGIS-----------MSACREIALLRELK 76
Query: 183 HPNIVNLIEVIDDPNSDHFYMVLEYVEGK-WDNDGF-------GQPGAIGESMARKYLRD 234
HPN+++L +V +++ +Y E W F +P + M + L
Sbjct: 77 HPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQ 136
Query: 235 IVSGLMYLHG 244
I+ G+ YLH
Sbjct: 137 ILDGIHYLHA 146
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 55/128 (42%), Gaps = 7/128 (5%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
I ++ + +G GS+GKV L + +AIKA K + + + T V + VL
Sbjct: 17 IEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKD----VVLMDDDVECTMVEKRVL 72
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
+ +HP + ++ ++ + V+EY+ G S A Y +I+
Sbjct: 73 SLAW-EHPFLTHMFCTFQ--TKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEII 129
Query: 237 SGLMYLHG 244
GL +LH
Sbjct: 130 LGLQFLHS 137
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 55/127 (43%), Gaps = 13/127 (10%)
Query: 123 VRKIGAGSYGKVVLY----RSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIM 178
+R +G G +GKV LY + G+ A+KA K P + ++E+ I+
Sbjct: 19 IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKAL------KADCGPQHR--SGWKQEIDIL 70
Query: 179 KMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSG 238
+ L H +I+ +D +V+EYV D + +IG + + + I G
Sbjct: 71 RTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPR-HSIGLAQLLLFAQQICEG 129
Query: 239 LMYLHGH 245
+ YLH
Sbjct: 130 MAYLHAQ 136
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 39/70 (55%), Gaps = 10/70 (14%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
+++ + +G G++G+VV R++LD ++YAIK ++ +E ++ + EV +
Sbjct: 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIK----------KIRHTEEKLSTILSEVXL 55
Query: 178 MKMLQHPNIV 187
+ L H +V
Sbjct: 56 LASLNHQYVV 65
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 10/86 (11%)
Query: 125 KIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHP 184
+IG G++G+V R D A+K+ ++ L+ +E I+K HP
Sbjct: 121 QIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLK--------AKFLQEARILKQYSHP 172
Query: 185 NIVNLIEVIDDPNSDHFYMVLEYVEG 210
NIV LI V Y+V+E V+G
Sbjct: 173 NIVRLIGVCT--QKQPIYIVMELVQG 196
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 10/86 (11%)
Query: 125 KIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHP 184
+IG G++G+V R D A+K+ ++ L+ +E I+K HP
Sbjct: 121 QIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLK--------AKFLQEARILKQYSHP 172
Query: 185 NIVNLIEVIDDPNSDHFYMVLEYVEG 210
NIV LI V Y+V+E V+G
Sbjct: 173 NIVRLIGVCT--QKQPIYIVMELVQG 196
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 10/130 (7%)
Query: 115 KMINEYVHVRKIGAGSYGKVVLYRSSLDGKH-YAIKAFHKSHLSKLRVAPSETAMTDVRR 173
+ + Y+ R +G G + K + +D K +A K KS L L+ E T
Sbjct: 23 RTMKRYMRGRFLGKGGFAKCYEI-TDMDTKEVFAGKVVPKSML--LKPHQKEKMST---- 75
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLR 233
E+ I K L +P++V +D D Y+VLE + + + A+ E AR ++R
Sbjct: 76 EIAIHKSLDNPHVVGFHGFFED--DDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMR 133
Query: 234 DIVSGLMYLH 243
+ G+ YLH
Sbjct: 134 QTIQGVQYLH 143
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 55/125 (44%), Gaps = 13/125 (10%)
Query: 123 VRKIGAGSYGKVVLY----RSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIM 178
+R +G G +GKV LY + G+ A+KA K P + ++E+ I+
Sbjct: 19 IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKAL------KADCGPQHR--SGWKQEIDIL 70
Query: 179 KMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSG 238
+ L H +I+ +D +V+EYV D + +IG + + + I G
Sbjct: 71 RTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPR-HSIGLAQLLLFAQQICEG 129
Query: 239 LMYLH 243
+ YLH
Sbjct: 130 MAYLH 134
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 60/129 (46%), Gaps = 18/129 (13%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
++Y VRK+G G Y +V + + + +K +K ++RE+ I
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKNK------------IKREIKI 84
Query: 178 MKMLQH-PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQP-GAIGESMARKYLRDI 235
++ L+ PNI+ L +++ DP S +V E+V +N F Q + + R Y+ +I
Sbjct: 85 LENLRGGPNIITLADIVKDPVSRTPALVFEHV----NNTDFKQLYQTLTDYDIRFYMYEI 140
Query: 236 VSGLMYLHG 244
+ L Y H
Sbjct: 141 LKALDYCHS 149
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 59/130 (45%), Gaps = 10/130 (7%)
Query: 115 KMINEYVHVRKIGAGSYGKVVLYRSSLDGKH-YAIKAFHKSHLSKLRVAPSETAMTDVRR 173
+ + Y+ R +G G + K + +D K +A K KS L K P + +
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEI-TDMDTKEVFAGKVVPKSMLLK----PHQKE--KMST 91
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLR 233
E+ I K L +P++V +D D Y+VLE + + + A+ E AR ++R
Sbjct: 92 EIAIHKSLDNPHVVGFHGFFED--DDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMR 149
Query: 234 DIVSGLMYLH 243
+ G+ YLH
Sbjct: 150 QTIQGVQYLH 159
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 59/130 (45%), Gaps = 10/130 (7%)
Query: 115 KMINEYVHVRKIGAGSYGKVVLYRSSLDGKH-YAIKAFHKSHLSKLRVAPSETAMTDVRR 173
+ + Y+ R +G G + K + +D K +A K KS L K P + +
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEI-TDMDTKEVFAGKVVPKSMLLK----PHQKE--KMST 91
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLR 233
E+ I K L +P++V +D D Y+VLE + + + A+ E AR ++R
Sbjct: 92 EIAIHKSLDNPHVVGFHGFFED--DDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMR 149
Query: 234 DIVSGLMYLH 243
+ G+ YLH
Sbjct: 150 QTIQGVQYLH 159
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 59/131 (45%), Gaps = 21/131 (16%)
Query: 120 YVHVRK-IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIM 178
YV + + IGAG +G+V R GK + A + L+ +E + E IM
Sbjct: 17 YVKIEEVIGAGEFGEVCRGRLKAPGKKESCVA-----IKTLKGGYTERQRREFLSEASIM 71
Query: 179 KMLQHPNIVNLIEVIDDPNSDHFYMVLEYVE-GKWD-----NDG-FGQPGAIGESMARKY 231
+HPNI+ L V+ NS ++ E++E G D NDG F +G
Sbjct: 72 GQFEHPNIIRLEGVVT--NSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVG------M 123
Query: 232 LRDIVSGLMYL 242
LR I SG+ YL
Sbjct: 124 LRGIASGMRYL 134
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 56/128 (43%), Gaps = 9/128 (7%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
+ +Y + KIG G+YG V + + + + I A + L E + RE+
Sbjct: 1 MQKYEKLEKIGEGTYGTVF---KAKNRETHEIVALKRVRLDD----DDEGVPSSALREIC 53
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
++K L+H NIV L +V+ + +V E+ + G + + + +L ++
Sbjct: 54 LLKELKHKNIVRLHDVLH--SDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLL 111
Query: 237 SGLMYLHG 244
GL + H
Sbjct: 112 KGLGFCHS 119
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 10/130 (7%)
Query: 115 KMINEYVHVRKIGAGSYGKVVLYRSSLDGKH-YAIKAFHKSHLSKLRVAPSETAMTDVRR 173
+ + Y+ R +G G + K + +D K +A K KS L L+ E T
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEI-TDMDTKEVFAGKVVPKSML--LKPHQKEKMST---- 91
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLR 233
E+ I K L +P++V +D D Y+VLE + + + A+ E AR ++R
Sbjct: 92 EIAIHKSLDNPHVVGFHGFFED--DDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMR 149
Query: 234 DIVSGLMYLH 243
+ G+ YLH
Sbjct: 150 QTIQGVQYLH 159
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 36.2 bits (82), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 56/128 (43%), Gaps = 9/128 (7%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
+ +Y + KIG G+YG V + + + + I A + L E + RE+
Sbjct: 1 MQKYEKLEKIGEGTYGTVF---KAKNRETHEIVALKRVRLDD----DDEGVPSSALREIC 53
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
++K L+H NIV L +V+ + +V E+ + G + + + +L ++
Sbjct: 54 LLKELKHKNIVRLHDVLH--SDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLL 111
Query: 237 SGLMYLHG 244
GL + H
Sbjct: 112 KGLGFCHS 119
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 36.2 bits (82), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 14/106 (13%)
Query: 108 SEDENGTKMINEYVH-VRKIGAGSYGKVVLYR----SSLDGKHYAIKAFHKSHLSKLRVA 162
SED + T+ ++ ++++G G++G V + R G+ A+K S
Sbjct: 2 SEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-------- 53
Query: 163 PSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYV 208
+E + D RE+ I+K LQH NIV V + +++EY+
Sbjct: 54 -TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 98
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 36.2 bits (82), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 183 HPNIV---NLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGL 239
HP+IV N +E D Y+V+EYV G+ GQ + E++A YL +I+ L
Sbjct: 138 HPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQKLPVAEAIA--YLLEILPAL 195
Query: 240 MYLH 243
YLH
Sbjct: 196 SYLH 199
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 36.2 bits (82), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 16/89 (17%)
Query: 125 KIGAGSYGKVVLYR-----SSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
++G G++GKV L D A+KA ++ SE+A D +RE ++
Sbjct: 48 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA---------SESARQDFQREAELLT 98
Query: 180 MLQHPNIVNLIEVIDDPNSDHFYMVLEYV 208
MLQH +IV V + MV EY+
Sbjct: 99 MLQHQHIVRFFGVCTEGRP--LLMVFEYM 125
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 36.2 bits (82), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 46/103 (44%), Gaps = 19/103 (18%)
Query: 113 GTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVR 172
++ + ++ ++ +G G +G V ++ +D +YAIK ++R+ E A V
Sbjct: 1 ASRYLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIK--------RIRLPNRELAREKVM 52
Query: 173 REVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDND 215
REV + L+HP IV +F LE KW +
Sbjct: 53 REVKALAKLEHPGIVR-----------YFNAWLETPPEKWQEE 84
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 35.8 bits (81), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 59/131 (45%), Gaps = 21/131 (16%)
Query: 120 YVHVRK-IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIM 178
YV + + IGAG +G+V R GK + A + L+ +E + E IM
Sbjct: 15 YVKIEEVIGAGEFGEVCRGRLKAPGKKESCVA-----IKTLKGGYTERQRREFLSEASIM 69
Query: 179 KMLQHPNIVNLIEVIDDPNSDHFYMVLEYVE-GKWD-----NDG-FGQPGAIGESMARKY 231
+HPNI+ L V+ NS ++ E++E G D NDG F +G
Sbjct: 70 GQFEHPNIIRLEGVVT--NSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVG------M 121
Query: 232 LRDIVSGLMYL 242
LR I SG+ YL
Sbjct: 122 LRGIASGMRYL 132
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 35.8 bits (81), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 62/136 (45%), Gaps = 22/136 (16%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVR---RE 174
+EY + IG G+YG V R L G+ AIK ++ + +T+ + RE
Sbjct: 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIK----------KIPNAFDVVTNAKRTLRE 103
Query: 175 VLIMKMLQHPNIVNLIEVIDDPNSDH-----FYMVLEYVEGKWDN-DGFGQPGAIGESMA 228
+ I+K +H NI+ + +++ P + Y+VL+ +E QP +
Sbjct: 104 LKILKHFKHDNIIAIKDIL-RPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTL--EHV 160
Query: 229 RKYLRDIVSGLMYLHG 244
R +L ++ GL Y+H
Sbjct: 161 RYFLYQLLRGLKYMHS 176
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 35.8 bits (81), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 9/91 (9%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++G G++ V L G+ YA K + LS + RE I +
Sbjct: 24 YQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSA-------RDHQKLEREARICR 76
Query: 180 MLQHPNIVNLIEVIDDPNSDHFYMVLEYVEG 210
+L+HPNIV L + I + H Y++ + V G
Sbjct: 77 LLKHPNIVRLHDSISE--EGHHYLIFDLVTG 105
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 35.8 bits (81), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 55/128 (42%), Gaps = 12/128 (9%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETA--MTDVRREV 175
+ + ++G GSYG+V RS DG+ YA+ K +S R P + A + +V
Sbjct: 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAV----KRSMSPFR-GPKDRARKLAEVGSH- 110
Query: 176 LIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
K+ QHP V L + ++ Y+ E ++ E+ YLRD
Sbjct: 111 --EKVGQHPCCVRLEQAWEE--GGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDT 166
Query: 236 VSGLMYLH 243
+ L +LH
Sbjct: 167 LLALAHLH 174
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 35.8 bits (81), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 16/89 (17%)
Query: 125 KIGAGSYGKVVLYR-----SSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
++G G++GKV L D A+KA ++ SE+A D +RE ++
Sbjct: 19 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA---------SESARQDFQREAELLT 69
Query: 180 MLQHPNIVNLIEVIDDPNSDHFYMVLEYV 208
MLQH +IV V + MV EY+
Sbjct: 70 MLQHQHIVRFFGVCTEGRP--LLMVFEYM 96
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 35.8 bits (81), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 48/118 (40%), Gaps = 8/118 (6%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
+GAG +G+V R L K A + L+V +E D E IM HPN
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVA-----IKTLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 186 IVNLIEVIDDPNSDHFYMVLEYVE-GKWDNDGFGQPGAIGESMARKYLRDIVSGLMYL 242
I+ L V+ S +V EY+E G D+ LR I SG+ YL
Sbjct: 108 IIRLEGVVT--KSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL 163
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 35.8 bits (81), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 9/95 (9%)
Query: 116 MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREV 175
M +EY ++G G++ V G+ YA K + LS + RE
Sbjct: 2 MTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSA-------RDHQKLEREA 54
Query: 176 LIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEG 210
I ++L+HPNIV L + I + Y+V + V G
Sbjct: 55 RICRLLKHPNIVRLHDSISE--EGFHYLVFDLVTG 87
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 35.8 bits (81), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 48/118 (40%), Gaps = 8/118 (6%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
+GAG +G+V R L K A + L+V +E D E IM HPN
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVA-----IKTLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 186 IVNLIEVIDDPNSDHFYMVLEYVE-GKWDNDGFGQPGAIGESMARKYLRDIVSGLMYL 242
I+ L V+ S +V EY+E G D+ LR I SG+ YL
Sbjct: 108 IIRLEGVVT--KSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL 163
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 35.8 bits (81), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 57/141 (40%), Gaps = 33/141 (23%)
Query: 125 KIGAGSYGKVVLYR-----SSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
++G G++GKV L D A+KA ++ SE+A D +RE ++
Sbjct: 25 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA---------SESARQDFQREAELLT 75
Query: 180 MLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQ----------------PGAI 223
MLQH +IV V + MV EY+ D + F + PG +
Sbjct: 76 MLQHQHIVRFFGVCTEGRP--LLMVFEYMRHG-DLNRFLRSHGPDAKLLAGGEDVAPGPL 132
Query: 224 GESMARKYLRDIVSGLMYLHG 244
G + +G++YL G
Sbjct: 133 GLGQLLAVASQVAAGMVYLAG 153
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 35.8 bits (81), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 48/118 (40%), Gaps = 8/118 (6%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
+GAG +G+V R L K A + L+V +E D E IM HPN
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVA-----IKTLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 186 IVNLIEVIDDPNSDHFYMVLEYVE-GKWDNDGFGQPGAIGESMARKYLRDIVSGLMYL 242
I+ L V+ S +V EY+E G D+ LR I SG+ YL
Sbjct: 108 IIRLEGVVT--KSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL 163
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 35.8 bits (81), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 48/118 (40%), Gaps = 8/118 (6%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
+GAG +G+V R L K A + L+V +E D E IM HPN
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVA-----IKTLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 186 IVNLIEVIDDPNSDHFYMVLEYVE-GKWDNDGFGQPGAIGESMARKYLRDIVSGLMYL 242
I+ L V+ S +V EY+E G D+ LR I SG+ YL
Sbjct: 108 IIRLEGVVT--KSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL 163
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 35.8 bits (81), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 62/136 (45%), Gaps = 22/136 (16%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVR---RE 174
+EY + IG G+YG V R L G+ AIK ++ + +T+ + RE
Sbjct: 55 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIK----------KIPNAFDVVTNAKRTLRE 104
Query: 175 VLIMKMLQHPNIVNLIEVIDDPNSDH-----FYMVLEYVEGKWDN-DGFGQPGAIGESMA 228
+ I+K +H NI+ + +++ P + Y+VL+ +E QP +
Sbjct: 105 LKILKHFKHDNIIAIKDIL-RPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTL--EHV 161
Query: 229 RKYLRDIVSGLMYLHG 244
R +L ++ GL Y+H
Sbjct: 162 RYFLYQLLRGLKYMHS 177
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 35.8 bits (81), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 48/118 (40%), Gaps = 8/118 (6%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
+GAG +G+V R L K A + L+V +E D E IM HPN
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVA-----IKTLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 186 IVNLIEVIDDPNSDHFYMVLEYVE-GKWDNDGFGQPGAIGESMARKYLRDIVSGLMYL 242
I+ L V+ S +V EY+E G D+ LR I SG+ YL
Sbjct: 108 IIRLEGVVT--KSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL 163
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 35.8 bits (81), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 48/118 (40%), Gaps = 8/118 (6%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
+GAG +G+V R L K A + L+V +E D E IM HPN
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVA-----IKTLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 186 IVNLIEVIDDPNSDHFYMVLEYVE-GKWDNDGFGQPGAIGESMARKYLRDIVSGLMYL 242
I+ L V+ S +V EY+E G D+ LR I SG+ YL
Sbjct: 108 IIRLEGVVT--KSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL 163
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 35.8 bits (81), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 48/118 (40%), Gaps = 8/118 (6%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
+GAG +G+V R L K A + L+V +E D E IM HPN
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVA-----IKTLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 186 IVNLIEVIDDPNSDHFYMVLEYVE-GKWDNDGFGQPGAIGESMARKYLRDIVSGLMYL 242
I+ L V+ S +V EY+E G D+ LR I SG+ YL
Sbjct: 108 IIRLEGVVT--KSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL 163
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 35.4 bits (80), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 9/95 (9%)
Query: 116 MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREV 175
M +EY ++G G++ V G+ YA K + LS + RE
Sbjct: 2 MTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSA-------RDHQKLEREA 54
Query: 176 LIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEG 210
I ++L+HPNIV L + I + Y+V + V G
Sbjct: 55 RICRLLKHPNIVRLHDSISE--EGFHYLVFDLVTG 87
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 35.4 bits (80), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 52/121 (42%), Gaps = 5/121 (4%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ 182
+R +G G +GKV L R +G + + KS L+ + D+++E+ I++ L
Sbjct: 14 IRDLGEGHFGKVELCRYDPEGDNTGEQVAVKS----LKPESGGNHIADLKKEIEILRNLY 69
Query: 183 HPNIVNLIEVIDDPNSDHFYMVLEYV-EGKWDNDGFGQPGAIGESMARKYLRDIVSGLMY 241
H NIV + + + +++E++ G I KY I G+ Y
Sbjct: 70 HENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDY 129
Query: 242 L 242
L
Sbjct: 130 L 130
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 35.4 bits (80), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 48/118 (40%), Gaps = 8/118 (6%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
+GAG +G+V R L K A + L+V +E D E IM HPN
Sbjct: 51 VGAGEFGEVCSGRLKLPSKKEISVA-----IKTLKVGYTEKQRRDFLGEASIMGQFDHPN 105
Query: 186 IVNLIEVIDDPNSDHFYMVLEYVE-GKWDNDGFGQPGAIGESMARKYLRDIVSGLMYL 242
I+ L V+ S +V EY+E G D+ LR I SG+ YL
Sbjct: 106 IIRLEGVVT--KSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL 161
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 35.4 bits (80), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 49/120 (40%), Gaps = 8/120 (6%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
+ +GAG +G+V R L K A + L+V +E D E IM H
Sbjct: 39 KVVGAGEFGEVCSGRLKLPSKKEISVA-----IKTLKVGYTEKQRRDFLGEASIMGQFDH 93
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVE-GKWDNDGFGQPGAIGESMARKYLRDIVSGLMYL 242
PNI+ L V+ S +V EY+E G D+ LR I SG+ YL
Sbjct: 94 PNIIRLEGVVT--KSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL 151
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 35.4 bits (80), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 52/121 (42%), Gaps = 5/121 (4%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ 182
+R +G G +GKV L R +G + + KS L+ + D+++E+ I++ L
Sbjct: 26 IRDLGEGHFGKVELCRYDPEGDNTGEQVAVKS----LKPESGGNHIADLKKEIEILRNLY 81
Query: 183 HPNIVNLIEVIDDPNSDHFYMVLEYV-EGKWDNDGFGQPGAIGESMARKYLRDIVSGLMY 241
H NIV + + + +++E++ G I KY I G+ Y
Sbjct: 82 HENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDY 141
Query: 242 L 242
L
Sbjct: 142 L 142
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 35.4 bits (80), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 49/120 (40%), Gaps = 8/120 (6%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
+ +GAG +G+V R L K A + L+V +E D E IM H
Sbjct: 22 KVVGAGEFGEVCSGRLKLPSKKEISVA-----IKTLKVGYTEKQRRDFLGEASIMGQFDH 76
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVE-GKWDNDGFGQPGAIGESMARKYLRDIVSGLMYL 242
PNI+ L V+ S +V EY+E G D+ LR I SG+ YL
Sbjct: 77 PNIIRLEGVVT--KSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL 134
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 35.4 bits (80), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 8/73 (10%)
Query: 115 KMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRRE 174
+ + ++ ++ +G G +G V ++ +D +YAIK ++R+ E A V RE
Sbjct: 2 RYLTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIK--------RIRLPNRELAREKVMRE 53
Query: 175 VLIMKMLQHPNIV 187
V + L+HP IV
Sbjct: 54 VKALAKLEHPGIV 66
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 35.4 bits (80), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 169 TDVRREVLIMKMLQ-HPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESM 227
+ ++E+ +K+ + HPNIV L EV D H ++V+E + G + + E+
Sbjct: 50 ANTQKEITALKLCEGHPNIVKLHEVFHD--QLHTFLVMELLNGGELFERIKKKKHFSETE 107
Query: 228 ARKYLRDIVSGLMYLH 243
A +R +VS + ++H
Sbjct: 108 ASYIMRKLVSAVSHMH 123
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 34.7 bits (78), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 49/99 (49%), Gaps = 11/99 (11%)
Query: 116 MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREV 175
++ Y +++ IG+G+ G VV ++ ++ AIK R ++T RE+
Sbjct: 22 VLKRYQNLKPIGSGAQGIVVAAYDAILERNVAIKKLS-------RPFQNQTHAKRAYREL 74
Query: 176 LIMKMLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEG 210
++MK++ H NI+ L+ V S Y+V+E ++
Sbjct: 75 VLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA 113
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 34.7 bits (78), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 49/105 (46%), Gaps = 14/105 (13%)
Query: 109 EDENGTKMINEYVH-VRKIGAGSYGKVVLYR----SSLDGKHYAIKAFHKSHLSKLRVAP 163
ED + T+ ++ +R++G G++G V + R G+ A+K S
Sbjct: 3 EDRDPTQFEERHLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--------- 53
Query: 164 SETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYV 208
+E + D RE+ I+K LQH NIV V + +++E++
Sbjct: 54 TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFL 98
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 34.7 bits (78), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 49/118 (41%), Gaps = 8/118 (6%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
IGAG +G+V L GK A + L+ +E D E IM HPN
Sbjct: 41 IGAGEFGEVCSGHLKLPGKREIFVA-----IKTLKSGYTEKQRRDFLSEASIMGQFDHPN 95
Query: 186 IVNLIEVIDDPNSDHFYMVLEYVE-GKWDNDGFGQPGAIGESMARKYLRDIVSGLMYL 242
+++L V+ S ++ E++E G D+ G LR I +G+ YL
Sbjct: 96 VIHLEGVVT--KSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYL 151
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 34.7 bits (78), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 62/145 (42%), Gaps = 18/145 (12%)
Query: 103 NKLIRSEDENGTKMINEYVHVRKIGAGSYG--KVVLYRSSLDGKHYAIKAFHKSHLSKLR 160
+ +++ N + + Y IG GSY K +++++ +A+K KS +
Sbjct: 7 HSIVQQLHRNSIQFTDGYEVKEDIGVGSYSVCKRCIHKAT--NMEFAVKIIDKS-----K 59
Query: 161 VAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQP 220
P+E ++++ QHPNI+ L +V DD + Y+V E ++G D +
Sbjct: 60 RDPTEEIE-------ILLRYGQHPNIITLKDVYDD--GKYVYVVTELMKGGELLDKILRQ 110
Query: 221 GAIGESMARKYLRDIVSGLMYLHGH 245
E A L I + YLH
Sbjct: 111 KFFSEREASAVLFTITKTVEYLHAQ 135
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 34.7 bits (78), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 49/121 (40%), Gaps = 14/121 (11%)
Query: 126 IGAGSYGKVVLYRSSLDGKH---YAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ 182
IGAG +G+V L GK AIK + K R D E IM
Sbjct: 15 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQR--------RDFLSEASIMGQFD 66
Query: 183 HPNIVNLIEVIDDPNSDHFYMVLEYVE-GKWDNDGFGQPGAIGESMARKYLRDIVSGLMY 241
HPN+++L V+ S ++ E++E G D+ G LR I +G+ Y
Sbjct: 67 HPNVIHLEGVVT--KSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKY 124
Query: 242 L 242
L
Sbjct: 125 L 125
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 34.7 bits (78), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 57/139 (41%), Gaps = 33/139 (23%)
Query: 116 MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRR-- 173
+++ YV KIG GS G V L R G+ A+K M D+R+
Sbjct: 46 LLDSYV---KIGEGSTGIVCLAREKHSGRQVAVK------------------MMDLRKQQ 84
Query: 174 -------EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGES 226
EV+IM+ QH N+V + + + ++++E+++G D Q + E
Sbjct: 85 RRELLFNEVVIMRDYQHFNVVEMYK--SYLVGEELWVLMEFLQGGALTDIVSQ-VRLNEE 141
Query: 227 MARKYLRDIVSGLMYLHGH 245
++ L YLH
Sbjct: 142 QIATVCEAVLQALAYLHAQ 160
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 34.7 bits (78), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 51/127 (40%), Gaps = 16/127 (12%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
++ H ++G GS+G+V + G A+K K L RV E++
Sbjct: 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVK---KVRLEVFRV-----------EELV 102
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
L P IV L + + + +M E +EG Q G + E A YL +
Sbjct: 103 ACAGLSSPRIVPLYGAVREGPWVNIFM--ELLEGGSLGQLIKQMGCLPEDRALYYLGQAL 160
Query: 237 SGLMYLH 243
GL YLH
Sbjct: 161 EGLEYLH 167
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 34.7 bits (78), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 61/145 (42%), Gaps = 18/145 (12%)
Query: 103 NKLIRSEDENGTKMINEYVHVRKIGAGSYG--KVVLYRSSLDGKHYAIKAFHKSHLSKLR 160
+ +++ N + + Y IG GSY K +++++ +A+K KS +
Sbjct: 7 HSIVQQLHRNSIQFTDGYEVKEDIGVGSYSVCKRCIHKAT--NXEFAVKIIDKS-----K 59
Query: 161 VAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQP 220
P+E ++++ QHPNI+ L +V DD + Y+V E +G D +
Sbjct: 60 RDPTEEIE-------ILLRYGQHPNIITLKDVYDD--GKYVYVVTELXKGGELLDKILRQ 110
Query: 221 GAIGESMARKYLRDIVSGLMYLHGH 245
E A L I + YLH
Sbjct: 111 KFFSEREASAVLFTITKTVEYLHAQ 135
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 34.7 bits (78), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 65/157 (41%), Gaps = 30/157 (19%)
Query: 97 FPVKESNKLIRSEDENGTKMINEYVHVRK-IGAGSYGKVVLYRSSLDGKH---YAIKAFH 152
F ++ N+ +R E ++ + + K IG G +G+V R + GK AIK
Sbjct: 10 FTFEDPNQAVR---EFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLK 66
Query: 153 KSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVE-GK 211
+ K R D E IM HPNI++L V+ ++ EY+E G
Sbjct: 67 AGYTDKQR--------RDFLSEASIMGQFDHPNIIHLEGVVT--KCKPVMIITEYMENGS 116
Query: 212 WD-----NDG-FGQPGAIGESMARKYLRDIVSGLMYL 242
D NDG F +G LR I SG+ YL
Sbjct: 117 LDAFLRKNDGRFTVIQLVG------MLRGIGSGMKYL 147
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 34.7 bits (78), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 49/105 (46%), Gaps = 14/105 (13%)
Query: 109 EDENGTKMINEYVH-VRKIGAGSYGKVVLYR----SSLDGKHYAIKAFHKSHLSKLRVAP 163
ED + T+ ++ ++++G G++G V + R G+ A+K S
Sbjct: 7 EDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--------- 57
Query: 164 SETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYV 208
+E + D RE+ I+K LQH NIV V + +++EY+
Sbjct: 58 TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 102
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 34.3 bits (77), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 49/105 (46%), Gaps = 14/105 (13%)
Query: 109 EDENGTKMINEYVH-VRKIGAGSYGKVVLYR----SSLDGKHYAIKAFHKSHLSKLRVAP 163
ED + T+ ++ ++++G G++G V + R G+ A+K S
Sbjct: 5 EDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--------- 55
Query: 164 SETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYV 208
+E + D RE+ I+K LQH NIV V + +++EY+
Sbjct: 56 TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 100
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 34.3 bits (77), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 49/105 (46%), Gaps = 14/105 (13%)
Query: 109 EDENGTKMINEYVH-VRKIGAGSYGKVVLYR----SSLDGKHYAIKAFHKSHLSKLRVAP 163
ED + T+ ++ ++++G G++G V + R G+ A+K S
Sbjct: 6 EDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--------- 56
Query: 164 SETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYV 208
+E + D RE+ I+K LQH NIV V + +++EY+
Sbjct: 57 TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 101
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 34.3 bits (77), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
N +VR IG G++G+V R+ + F + L+ S D +RE +
Sbjct: 47 NNIEYVRDIGEGAFGRVFQARAP---GLLPYEPFTMVAVKMLKEEASADMQADFQREAAL 103
Query: 178 MKMLQHPNIVNLIEV 192
M +PNIV L+ V
Sbjct: 104 MAEFDNPNIVKLLGV 118
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 34.3 bits (77), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 51/127 (40%), Gaps = 16/127 (12%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
++ H ++G GS+G+V + G A+K K L RV E++
Sbjct: 73 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVK---KVRLEVFRV-----------EELV 118
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
L P IV L + + + +M E +EG Q G + E A YL +
Sbjct: 119 ACAGLSSPRIVPLYGAVREGPWVNIFM--ELLEGGSLGQLIKQMGCLPEDRALYYLGQAL 176
Query: 237 SGLMYLH 243
GL YLH
Sbjct: 177 EGLEYLH 183
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 34.3 bits (77), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 49/105 (46%), Gaps = 14/105 (13%)
Query: 109 EDENGTKMINEYVH-VRKIGAGSYGKVVLYR----SSLDGKHYAIKAFHKSHLSKLRVAP 163
ED + T+ ++ ++++G G++G V + R G+ A+K S
Sbjct: 31 EDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--------- 81
Query: 164 SETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYV 208
+E + D RE+ I+K LQH NIV V + +++EY+
Sbjct: 82 TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 126
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 34.3 bits (77), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 49/105 (46%), Gaps = 14/105 (13%)
Query: 109 EDENGTKMINEYVH-VRKIGAGSYGKVVLYR----SSLDGKHYAIKAFHKSHLSKLRVAP 163
ED + T+ ++ ++++G G++G V + R G+ A+K S
Sbjct: 3 EDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--------- 53
Query: 164 SETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYV 208
+E + D RE+ I+K LQH NIV V + +++EY+
Sbjct: 54 TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 98
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 34.3 bits (77), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 51/127 (40%), Gaps = 16/127 (12%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
++ H ++G GS+G+V + G A+K K L RV E++
Sbjct: 71 VHWMTHQPRLGRGSFGEVHRMKDKQTGFQCAVK---KVRLEVFRV-----------EELV 116
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
L P IV L + + + +M E +EG Q G + E A YL +
Sbjct: 117 ACAGLSSPRIVPLYGAVREGPWVNIFM--ELLEGGSLGQLIKQMGCLPEDRALYYLGQAL 174
Query: 237 SGLMYLH 243
GL YLH
Sbjct: 175 EGLEYLH 181
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 34.3 bits (77), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 49/105 (46%), Gaps = 14/105 (13%)
Query: 109 EDENGTKMINEYVH-VRKIGAGSYGKVVLYR----SSLDGKHYAIKAFHKSHLSKLRVAP 163
ED + T+ ++ ++++G G++G V + R G+ A+K S
Sbjct: 4 EDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--------- 54
Query: 164 SETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYV 208
+E + D RE+ I+K LQH NIV V + +++EY+
Sbjct: 55 TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 99
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 34.3 bits (77), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 54/128 (42%), Gaps = 9/128 (7%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
+ ++ +R IG GSY KV+L R + YA+K K ++ + + V+ E
Sbjct: 19 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVN------DDEDIDWVQTEKH 72
Query: 177 IMKMLQ-HPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
+ + HP +V L + V+EYV G + + E AR Y +I
Sbjct: 73 VFEQASNHPFLVGLHSCFQ--TESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEI 130
Query: 236 VSGLMYLH 243
L YLH
Sbjct: 131 SLALNYLH 138
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 33.9 bits (76), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 52/127 (40%), Gaps = 26/127 (20%)
Query: 126 IGAGSYGKVVLYRSSLDGKH---YAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ 182
IG G +G+V R + GK AIK + K R D E IM
Sbjct: 22 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQR--------RDFLSEASIMGQFD 73
Query: 183 HPNIVNLIEVIDDPNSDHFYMVLEYVE-GKWD-----NDG-FGQPGAIGESMARKYLRDI 235
HPNI++L V+ ++ EY+E G D NDG F +G LR I
Sbjct: 74 HPNIIHLEGVVT--KCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVG------MLRGI 125
Query: 236 VSGLMYL 242
SG+ YL
Sbjct: 126 GSGMKYL 132
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 33.9 bits (76), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 61/129 (47%), Gaps = 12/129 (9%)
Query: 118 NEYVHVRKIGAGSYGKVVLYR--SSLDGKH-YAIKAFHKSHLSKLRVAPSETAMTDVRRE 174
+++ ++ +G GS+GKV L + S D + YA+K K+ L K+R + T + R+
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATL-KVR----DRVRTKMERD 78
Query: 175 VLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRD 234
+L+ + HP IV L Y++L+++ G + E + YL +
Sbjct: 79 ILV--EVNHPFIVKLHYAFQ--TEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAE 134
Query: 235 IVSGLMYLH 243
+ L +LH
Sbjct: 135 LALALDHLH 143
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 33.9 bits (76), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 56/124 (45%), Gaps = 12/124 (9%)
Query: 123 VRKIGAGSYGKVVLYRSSL---DGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
++ +G GS+GKV L R G YA+K K+ L K+R + T + R++L
Sbjct: 33 LKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATL-KVR----DRVRTKMERDIL--A 85
Query: 180 MLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGL 239
+ HP +V L Y++L+++ G + E + YL ++ GL
Sbjct: 86 DVNHPFVVKLHYAFQ--TEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGL 143
Query: 240 MYLH 243
+LH
Sbjct: 144 DHLH 147
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 33.9 bits (76), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 52/133 (39%), Gaps = 9/133 (6%)
Query: 113 GTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVR 172
TK + Y ++G G++ V G +A K + LS +
Sbjct: 24 STKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSA-------RDFQKLE 76
Query: 173 REVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYL 232
RE I + LQHPNIV L + I + Y+V + V G + E+ A +
Sbjct: 77 REARICRKLQHPNIVRLHDSIQE--ESFHYLVFDLVTGGELFEDIVAREFYSEADASHCI 134
Query: 233 RDIVSGLMYLHGH 245
+ I+ + Y H +
Sbjct: 135 QQILESIAYCHSN 147
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 33.9 bits (76), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 13/90 (14%)
Query: 123 VRKIGAGSYGKVVLYR----SSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIM 178
++++G G++G V + R G+ A+K S +E + D RE+ I+
Sbjct: 33 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---------TEEHLRDFEREIEIL 83
Query: 179 KMLQHPNIVNLIEVIDDPNSDHFYMVLEYV 208
K LQH NIV V + +++EY+
Sbjct: 84 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 113
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 33.9 bits (76), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 52/127 (40%), Gaps = 26/127 (20%)
Query: 126 IGAGSYGKVVLYRSSLDGKH---YAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ 182
IG G +G+V R + GK AIK + K R D E IM
Sbjct: 16 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQR--------RDFLSEASIMGQFD 67
Query: 183 HPNIVNLIEVIDDPNSDHFYMVLEYVE-GKWD-----NDG-FGQPGAIGESMARKYLRDI 235
HPNI++L V+ ++ EY+E G D NDG F +G LR I
Sbjct: 68 HPNIIHLEGVVT--KCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVG------MLRGI 119
Query: 236 VSGLMYL 242
SG+ YL
Sbjct: 120 GSGMKYL 126
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 33.9 bits (76), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 69/159 (43%), Gaps = 22/159 (13%)
Query: 89 LNGLICRQFPVKESNKLIRSEDENGTKMINEYVHV-RKIGAGSYGKVVLYRSSLDGKHYA 147
L + R P ++ KL ++++ TK E V K+G GSYG V
Sbjct: 2 LETVQLRNPPRRQLKKL---DEDSLTKQPEEVFDVLEKLGEGSYGSVY------------ 46
Query: 148 IKAFHKS--HLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVL 205
KA HK + ++ P E+ + ++ +E+ IM+ P++V N+D ++V+
Sbjct: 47 -KAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYFK-NTD-LWIVM 103
Query: 206 EYVEGKWDNDGFG-QPGAIGESMARKYLRDIVSGLMYLH 243
EY +D + + E L+ + GL YLH
Sbjct: 104 EYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLH 142
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 33.9 bits (76), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 13/90 (14%)
Query: 123 VRKIGAGSYGKVVLYR----SSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIM 178
++++G G++G V + R G+ A+K S +E + D RE+ I+
Sbjct: 15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---------TEEHLRDFEREIEIL 65
Query: 179 KMLQHPNIVNLIEVIDDPNSDHFYMVLEYV 208
K LQH NIV V + +++EY+
Sbjct: 66 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 95
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 33.9 bits (76), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 61/129 (47%), Gaps = 12/129 (9%)
Query: 118 NEYVHVRKIGAGSYGKVVLYR--SSLDGKH-YAIKAFHKSHLSKLRVAPSETAMTDVRRE 174
+++ ++ +G GS+GKV L + S D + YA+K K+ L K+R + T + R+
Sbjct: 25 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATL-KVR----DRVRTKMERD 79
Query: 175 VLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRD 234
+L+ + HP IV L Y++L+++ G + E + YL +
Sbjct: 80 ILV--EVNHPFIVKLHYAFQ--TEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAE 135
Query: 235 IVSGLMYLH 243
+ L +LH
Sbjct: 136 LALALDHLH 144
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 33.9 bits (76), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 54/128 (42%), Gaps = 9/128 (7%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
+ ++ +R IG GSY KV+L R + YA+K K ++ + + V+ E
Sbjct: 4 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVN------DDEDIDWVQTEKH 57
Query: 177 IMKMLQ-HPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
+ + HP +V L + V+EYV G + + E AR Y +I
Sbjct: 58 VFEQASNHPFLVGLHSCFQ--TESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEI 115
Query: 236 VSGLMYLH 243
L YLH
Sbjct: 116 SLALNYLH 123
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 33.9 bits (76), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 57/139 (41%), Gaps = 14/139 (10%)
Query: 111 ENGTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTD 170
E ++ E+ + KIG+G +G V LDG YAIK SK +A S +
Sbjct: 2 EMKSRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKR------SKKPLAGS-VDEQN 54
Query: 171 VRREVLIMKML-QHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMAR 229
REV +L QH ++V + DH + EY G D + I
Sbjct: 55 ALREVYAHAVLGQHSHVVRYFSAWAE--DDHMLIQNEYCNGGSLADAISENYRIMSYFKE 112
Query: 230 KYLRDIV----SGLMYLHG 244
L+D++ GL Y+H
Sbjct: 113 AELKDLLLQVGRGLRYIHS 131
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 33.9 bits (76), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 61/129 (47%), Gaps = 12/129 (9%)
Query: 118 NEYVHVRKIGAGSYGKVVLYR--SSLDGKH-YAIKAFHKSHLSKLRVAPSETAMTDVRRE 174
+++ ++ +G GS+GKV L + S D + YA+K K+ L K+R + T + R+
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATL-KVR----DRVRTKMERD 78
Query: 175 VLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRD 234
+L+ + HP IV L Y++L+++ G + E + YL +
Sbjct: 79 ILV--EVNHPFIVKLHYAFQ--TEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAE 134
Query: 235 IVSGLMYLH 243
+ L +LH
Sbjct: 135 LALALDHLH 143
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 33.9 bits (76), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 50/123 (40%), Gaps = 8/123 (6%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ 182
+R+IG GS+G V R + + AIK S S D+ +EV ++ L+
Sbjct: 20 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSG------KQSNEKWQDIIKEVRFLQKLR 73
Query: 183 HPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYL 242
HPN + ++ ++V+EY G + + E + GL YL
Sbjct: 74 HPNTIQYRGCYLREHTA--WLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYL 131
Query: 243 HGH 245
H H
Sbjct: 132 HSH 134
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 33.9 bits (76), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 13/90 (14%)
Query: 123 VRKIGAGSYGKVVLYR----SSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIM 178
++++G G++G V + R G+ A+K S +E + D RE+ I+
Sbjct: 15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---------TEEHLRDFEREIEIL 65
Query: 179 KMLQHPNIVNLIEVIDDPNSDHFYMVLEYV 208
K LQH NIV V + +++EY+
Sbjct: 66 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 95
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 33.9 bits (76), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 51/126 (40%), Gaps = 8/126 (6%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
+ +R+IG GS+G V R + + AIK S S D+ +EV ++
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQ------SNEKWQDIIKEVRFLQ 109
Query: 180 MLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGL 239
L+HPN + ++ ++V+EY G + + E + GL
Sbjct: 110 KLRHPNTIQYRGCYLREHTA--WLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGL 167
Query: 240 MYLHGH 245
YLH H
Sbjct: 168 AYLHSH 173
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 33.9 bits (76), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 54/128 (42%), Gaps = 9/128 (7%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
+ ++ +R IG GSY KV+L R + YA+K K ++ + + V+ E
Sbjct: 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVN------DDEDIDWVQTEKH 61
Query: 177 IMKMLQ-HPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
+ + HP +V L + V+EYV G + + E AR Y +I
Sbjct: 62 VFEQASNHPFLVGLHSCFQ--TESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEI 119
Query: 236 VSGLMYLH 243
L YLH
Sbjct: 120 SLALNYLH 127
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 33.9 bits (76), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 13/90 (14%)
Query: 123 VRKIGAGSYGKVVLYR----SSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIM 178
++++G G++G V + R G+ A+K S +E + D RE+ I+
Sbjct: 15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---------TEEHLRDFEREIEIL 65
Query: 179 KMLQHPNIVNLIEVIDDPNSDHFYMVLEYV 208
K LQH NIV V + +++EY+
Sbjct: 66 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 95
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 33.5 bits (75), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 13/90 (14%)
Query: 123 VRKIGAGSYGKVVLYR----SSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIM 178
++++G G++G V + R G+ A+K S +E + D RE+ I+
Sbjct: 16 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---------TEEHLRDFEREIEIL 66
Query: 179 KMLQHPNIVNLIEVIDDPNSDHFYMVLEYV 208
K LQH NIV V + +++EY+
Sbjct: 67 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 96
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 33.5 bits (75), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 13/90 (14%)
Query: 123 VRKIGAGSYGKVVLYR----SSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIM 178
++++G G++G V + R G+ A+K S +E + D RE+ I+
Sbjct: 33 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---------TEEHLRDFEREIEIL 83
Query: 179 KMLQHPNIVNLIEVIDDPNSDHFYMVLEYV 208
K LQH NIV V + +++EY+
Sbjct: 84 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 113
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 33.5 bits (75), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLR 233
E+ I + L H ++V +D +D ++VLE + + + A+ E AR YLR
Sbjct: 65 EISIHRSLAHQHVVGFHGFFED--NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR 122
Query: 234 DIVSGLMYLH 243
IV G YLH
Sbjct: 123 QIVLGCQYLH 132
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLR 233
E+ I + L H ++V +D +D ++VLE + + + A+ E AR YLR
Sbjct: 71 EISIHRSLAHQHVVGFHGFFED--NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR 128
Query: 234 DIVSGLMYLH 243
IV G YLH
Sbjct: 129 QIVLGCQYLH 138
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 13/90 (14%)
Query: 123 VRKIGAGSYGKVVLYR----SSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIM 178
++++G G++G V + R G+ A+K S +E + D RE+ I+
Sbjct: 13 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---------TEEHLRDFEREIEIL 63
Query: 179 KMLQHPNIVNLIEVIDDPNSDHFYMVLEYV 208
K LQH NIV V + +++EY+
Sbjct: 64 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 93
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 13/90 (14%)
Query: 123 VRKIGAGSYGKVVLYR----SSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIM 178
++++G G++G V + R G+ A+K S +E + D RE+ I+
Sbjct: 14 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---------TEEHLRDFEREIEIL 64
Query: 179 KMLQHPNIVNLIEVIDDPNSDHFYMVLEYV 208
K LQH NIV V + +++EY+
Sbjct: 65 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 94
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLR 233
E+ I + L H ++V +D +D ++VLE + + + A+ E AR YLR
Sbjct: 67 EISIHRSLAHQHVVGFHGFFED--NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR 124
Query: 234 DIVSGLMYLH 243
IV G YLH
Sbjct: 125 QIVLGCQYLH 134
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 54/132 (40%), Gaps = 9/132 (6%)
Query: 114 TKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRR 173
T+ ++Y ++G G++ V + YA K + LS + R
Sbjct: 27 TRFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSA-------RDHQKLER 79
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLR 233
E I ++L+HPNIV L + I + Y+V + V G + E+ A +
Sbjct: 80 EARICRLLKHPNIVRLHDSISE--EGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIH 137
Query: 234 DIVSGLMYLHGH 245
I+ + ++H H
Sbjct: 138 QILESVNHIHQH 149
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 54/133 (40%), Gaps = 9/133 (6%)
Query: 113 GTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVR 172
TK + Y ++G G++ V G +A K + LS +
Sbjct: 1 STKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSA-------RDFQKLE 53
Query: 173 REVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYL 232
RE I + LQHPNIV L + I + S H Y+V + V G + E+ A +
Sbjct: 54 REARICRKLQHPNIVRLHDSIQE-ESFH-YLVFDLVTGGELFEDIVAREFYSEADASHCI 111
Query: 233 RDIVSGLMYLHGH 245
+ I+ + Y H +
Sbjct: 112 QQILESIAYCHSN 124
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLR 233
E+ I + L H ++V +D +D ++VLE + + + A+ E AR YLR
Sbjct: 67 EISIHRSLAHQHVVGFHGFFED--NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR 124
Query: 234 DIVSGLMYLH 243
IV G YLH
Sbjct: 125 QIVLGCQYLH 134
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 54/132 (40%), Gaps = 9/132 (6%)
Query: 114 TKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRR 173
TK + Y ++G G++ V G +A K + LS + R
Sbjct: 1 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSA-------RDFQKLER 53
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLR 233
E I + LQHPNIV L + I + S H Y+V + V G + E+ A ++
Sbjct: 54 EARICRKLQHPNIVRLHDSIQE-ESFH-YLVFDLVTGGELFEDIVAREFYSEADASHCIQ 111
Query: 234 DIVSGLMYLHGH 245
I+ + Y H +
Sbjct: 112 QILESIAYCHSN 123
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 48/99 (48%), Gaps = 11/99 (11%)
Query: 116 MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREV 175
++ Y +++ IG+G+ G V ++ ++ AIK R ++T RE+
Sbjct: 60 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-------RPFQNQTHAKRAYREL 112
Query: 176 LIMKMLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEG 210
++MK + H NI++L+ V + Y+V+E ++
Sbjct: 113 VLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA 151
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLR 233
E+ I + L H ++V +D +D ++VLE + + + A+ E AR YLR
Sbjct: 89 EISIHRSLAHQHVVGFHGFFED--NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR 146
Query: 234 DIVSGLMYLH 243
IV G YLH
Sbjct: 147 QIVLGCQYLH 156
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLR 233
E+ I + L H ++V +D +D ++VLE + + + A+ E AR YLR
Sbjct: 91 EISIHRSLAHQHVVGFHGFFED--NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR 148
Query: 234 DIVSGLMYLH 243
IV G YLH
Sbjct: 149 QIVLGCQYLH 158
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 47/99 (47%), Gaps = 11/99 (11%)
Query: 116 MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREV 175
++ Y +++ IG+G+ G V ++ ++ AIK R ++T RE+
Sbjct: 24 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-------RPFQNQTHAKRAYREL 76
Query: 176 LIMKMLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEG 210
++MK + H NI+ L+ V S Y+V+E ++
Sbjct: 77 VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA 115
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 48/99 (48%), Gaps = 11/99 (11%)
Query: 116 MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREV 175
++ Y +++ IG+G+ G V ++ ++ AIK R ++T RE+
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-------RPFQNQTHAKRAYREL 74
Query: 176 LIMKMLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEG 210
++MK++ H NI+ L+ V S Y+V+E ++
Sbjct: 75 VLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA 113
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 50/131 (38%), Gaps = 18/131 (13%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
E V+ +G+G++G V +G+ I K L A + E LI
Sbjct: 38 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKI----LNETTGPKANVEFMDEALI 93
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHFYM------VLEYVEGKWDNDGFGQPGAIGESMARKY 231
M + HP++V L+ V P +LEYV DN IG + +
Sbjct: 94 MASMDHPHLVRLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDN--------IGSQLLLNW 145
Query: 232 LRDIVSGLMYL 242
I G+MYL
Sbjct: 146 CVQIAKGMMYL 156
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 33.5 bits (75), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 54/133 (40%), Gaps = 9/133 (6%)
Query: 113 GTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVR 172
TK + Y ++G G++ V G +A K + LS +
Sbjct: 1 STKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSA-------RDFQKLE 53
Query: 173 REVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYL 232
RE I + LQHPNIV L + I + S H Y+V + V G + E+ A +
Sbjct: 54 REARICRKLQHPNIVRLHDSIQE-ESFH-YLVFDLVTGGELFEDIVAREFYSEADASHCI 111
Query: 233 RDIVSGLMYLHGH 245
+ I+ + Y H +
Sbjct: 112 QQILESIAYCHSN 124
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 56/135 (41%), Gaps = 14/135 (10%)
Query: 114 TKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRR 173
++ E+ + KIG+G +G V LDG YAIK SK +A S + R
Sbjct: 7 SRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKR------SKKPLAGS-VDEQNALR 59
Query: 174 EVLIMKML-QHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYL 232
EV +L QH ++V + DH + EY G D + I L
Sbjct: 60 EVYAHAVLGQHSHVVRYFSAWAE--DDHMLIQNEYCNGGSLADAISENYRIMSYFKEAEL 117
Query: 233 RDIV----SGLMYLH 243
+D++ GL Y+H
Sbjct: 118 KDLLLQVGRGLRYIH 132
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 57/122 (46%), Gaps = 9/122 (7%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ 182
++ IG G++G+V + + + YA+K +K + K +ETA R+VL+ Q
Sbjct: 79 IKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLK----RAETACFREERDVLVNGDCQ 134
Query: 183 HPNIVNLIEVIDDPNSDHFYMVLE-YVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMY 241
I L D N H Y+V++ YV G + E MAR Y+ ++V +
Sbjct: 135 W--ITALHYAFQDEN--HLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDS 190
Query: 242 LH 243
+H
Sbjct: 191 IH 192
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 57/122 (46%), Gaps = 9/122 (7%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ 182
++ IG G++G+V + + + YA+K +K + K +ETA R+VL+ Q
Sbjct: 95 IKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLK----RAETACFREERDVLVNGDCQ 150
Query: 183 HPNIVNLIEVIDDPNSDHFYMVLE-YVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMY 241
I L D N H Y+V++ YV G + E MAR Y+ ++V +
Sbjct: 151 W--ITALHYAFQDEN--HLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDS 206
Query: 242 LH 243
+H
Sbjct: 207 IH 208
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 56/136 (41%), Gaps = 14/136 (10%)
Query: 114 TKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRR 173
++ E+ + KIG+G +G V LDG YAIK SK +A S + R
Sbjct: 5 SRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKR------SKKPLAGS-VDEQNALR 57
Query: 174 EVLIMKML-QHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYL 232
EV +L QH ++V + DH + EY G D + I L
Sbjct: 58 EVYAHAVLGQHSHVVRYFSAWAE--DDHMLIQNEYCNGGSLADAISENYRIMSYFKEAEL 115
Query: 233 RDIV----SGLMYLHG 244
+D++ GL Y+H
Sbjct: 116 KDLLLQVGRGLRYIHS 131
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 47/99 (47%), Gaps = 11/99 (11%)
Query: 116 MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREV 175
++ Y +++ IG+G+ G V ++ ++ AIK R ++T RE+
Sbjct: 27 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-------RPFQNQTHAKRAYREL 79
Query: 176 LIMKMLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEG 210
++MK + H NI+ L+ V S Y+V+E ++
Sbjct: 80 VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA 118
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 47/99 (47%), Gaps = 11/99 (11%)
Query: 116 MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREV 175
++ Y +++ IG+G+ G V ++ ++ AIK R ++T RE+
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-------RPFQNQTHAKRAYREL 74
Query: 176 LIMKMLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEG 210
++MK + H NI+ L+ V S Y+V+E ++
Sbjct: 75 VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA 113
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 68/164 (41%), Gaps = 24/164 (14%)
Query: 90 NGLICRQFPVKESNKLIRSEDE---NGTKM-INEYVHVRKIGAGSYGKVVL--YRSSLDG 143
+GL R K + ++DE +G + + E ++ IG G +G V+L YR G
Sbjct: 161 DGLCTRLIKPKVMEGTVAAQDEFYRSGWALNMKELKLLQTIGKGEFGDVMLGDYR----G 216
Query: 144 KHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYM 203
A+K ++ +A E +M L+H N+V L+ VI + Y+
Sbjct: 217 NKVAVKCIKNDATAQAFLA-----------EASVMTQLRHSNLVQLLGVIVEEKGG-LYI 264
Query: 204 VLEYVEGKWDNDGFGQPG--AIGESMARKYLRDIVSGLMYLHGH 245
V EY+ D G +G K+ D+ + YL G+
Sbjct: 265 VTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN 308
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 56/130 (43%), Gaps = 17/130 (13%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSE--TAMTDVRREVLI 177
Y ++ IG G+YG V +L+ AIK +++P E T RE+ I
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIK----------KISPFEHQTYCQRTLREIKI 78
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHF---YMVLEYVEGKWDNDGFGQPGAIGESMARKYLRD 234
+ +H NI+ + ++I P + Y+V + +E D + + +L
Sbjct: 79 LLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET--DLYKLLKTQHLSNDHICYFLYQ 136
Query: 235 IVSGLMYLHG 244
I+ GL Y+H
Sbjct: 137 ILRGLKYIHS 146
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 47/99 (47%), Gaps = 11/99 (11%)
Query: 116 MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREV 175
++ Y +++ IG+G+ G V ++ ++ AIK R ++T RE+
Sbjct: 23 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-------RPFQNQTHAKRAYREL 75
Query: 176 LIMKMLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEG 210
++MK + H NI+ L+ V S Y+V+E ++
Sbjct: 76 VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA 114
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 56/130 (43%), Gaps = 17/130 (13%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSE--TAMTDVRREVLI 177
Y ++ IG G+YG V +L+ AIK +++P E T RE+ I
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIK----------KISPFEHQTYCQRTLREIKI 79
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHF---YMVLEYVEGKWDNDGFGQPGAIGESMARKYLRD 234
+ +H NI+ + ++I P + Y+V + +E D + + +L
Sbjct: 80 LLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET--DLYKLLKTQHLSNDHICYFLYQ 137
Query: 235 IVSGLMYLHG 244
I+ GL Y+H
Sbjct: 138 ILRGLKYIHS 147
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 56/130 (43%), Gaps = 17/130 (13%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSE--TAMTDVRREVLI 177
Y ++ IG G+YG V +L+ AIK +++P E T RE+ I
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIK----------KISPFEHQTYCQRTLREIKI 72
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHF---YMVLEYVEGKWDNDGFGQPGAIGESMARKYLRD 234
+ +H NI+ + ++I P + Y+V + +E D + + +L
Sbjct: 73 LLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET--DLYKLLKTQHLSNDHICYFLYQ 130
Query: 235 IVSGLMYLHG 244
I+ GL Y+H
Sbjct: 131 ILRGLKYIHS 140
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 48/99 (48%), Gaps = 11/99 (11%)
Query: 116 MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREV 175
++ Y +++ IG+G+ G V ++ ++ AIK R ++T RE+
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-------RPFQNQTHAKRAYREL 74
Query: 176 LIMKMLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEG 210
++MK++ H NI+ L+ V S Y+V+E ++
Sbjct: 75 VLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA 113
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 47/99 (47%), Gaps = 11/99 (11%)
Query: 116 MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREV 175
++ Y +++ IG+G+ G V ++ ++ AIK R ++T RE+
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-------RPFQNQTHAKRAYREL 74
Query: 176 LIMKMLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEG 210
++MK + H NI+ L+ V S Y+V+E ++
Sbjct: 75 VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA 113
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 56/130 (43%), Gaps = 17/130 (13%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSE--TAMTDVRREVLI 177
Y ++ IG G+YG V +L+ AIK +++P E T RE+ I
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIK----------KISPFEHQTYCQRTLREIKI 79
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHF---YMVLEYVEGKWDNDGFGQPGAIGESMARKYLRD 234
+ +H NI+ + ++I P + Y+V + +E D + + +L
Sbjct: 80 LLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET--DLYKLLKTQHLSNDHICYFLYQ 137
Query: 235 IVSGLMYLHG 244
I+ GL Y+H
Sbjct: 138 ILRGLKYIHS 147
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 47/99 (47%), Gaps = 11/99 (11%)
Query: 116 MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREV 175
++ Y +++ IG+G+ G V ++ ++ AIK R ++T RE+
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-------RPFQNQTHAKRAYREL 74
Query: 176 LIMKMLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEG 210
++MK + H NI+ L+ V S Y+V+E ++
Sbjct: 75 VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA 113
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 51/126 (40%), Gaps = 14/126 (11%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
+KIG G + +V LDG A+K L + A D +E+ ++K L H
Sbjct: 38 KKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAK------ARADCIKEIDLLKQLNH 91
Query: 184 PNIVN-LIEVIDDPNSDHFYMVLEYVEG----KWDNDGFGQPGAIGESMARKYLRDIVSG 238
PN++ I+D + +VLE + + Q I E KY + S
Sbjct: 92 PNVIKYYASFIED---NELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSA 148
Query: 239 LMYLHG 244
L ++H
Sbjct: 149 LEHMHS 154
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 56/130 (43%), Gaps = 17/130 (13%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSE--TAMTDVRREVLI 177
Y ++ IG G+YG V +L+ AIK +++P E T RE+ I
Sbjct: 31 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIK----------KISPFEHQTYCQRTLREIKI 80
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHF---YMVLEYVEGKWDNDGFGQPGAIGESMARKYLRD 234
+ +H NI+ + ++I P + Y+V + +E D + + +L
Sbjct: 81 LLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET--DLYKLLKTQHLSNDHICYFLYQ 138
Query: 235 IVSGLMYLHG 244
I+ GL Y+H
Sbjct: 139 ILRGLKYIHS 148
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 56/130 (43%), Gaps = 17/130 (13%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSE--TAMTDVRREVLI 177
Y ++ IG G+YG V +L+ AIK +++P E T RE+ I
Sbjct: 22 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIK----------KISPFEHQTYCQRTLREIKI 71
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHF---YMVLEYVEGKWDNDGFGQPGAIGESMARKYLRD 234
+ +H NI+ + ++I P + Y+V + +E D + + +L
Sbjct: 72 LLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET--DLYKLLKTQHLSNDHICYFLYQ 129
Query: 235 IVSGLMYLHG 244
I+ GL Y+H
Sbjct: 130 ILRGLKYIHS 139
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 47/99 (47%), Gaps = 11/99 (11%)
Query: 116 MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREV 175
++ Y +++ IG+G+ G V ++ ++ AIK R ++T RE+
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-------RPFQNQTHAKRAYREL 74
Query: 176 LIMKMLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEG 210
++MK + H NI+ L+ V S Y+V+E ++
Sbjct: 75 VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA 113
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 56/130 (43%), Gaps = 17/130 (13%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSE--TAMTDVRREVLI 177
Y ++ IG G+YG V +L+ AIK +++P E T RE+ I
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIK----------KISPFEHQTYCQRTLREIKI 78
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHF---YMVLEYVEGKWDNDGFGQPGAIGESMARKYLRD 234
+ +H NI+ + ++I P + Y+V + +E D + + +L
Sbjct: 79 LLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET--DLYKLLKTQHLSNDHICYFLYQ 136
Query: 235 IVSGLMYLHG 244
I+ GL Y+H
Sbjct: 137 ILRGLKYIHS 146
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 48/99 (48%), Gaps = 11/99 (11%)
Query: 116 MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREV 175
++ Y +++ IG+G+ G V ++ ++ AIK R ++T RE+
Sbjct: 60 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-------RPFQNQTHAKRAYREL 112
Query: 176 LIMKMLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEG 210
++MK + H NI++L+ V + Y+V+E ++
Sbjct: 113 VLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA 151
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 56/130 (43%), Gaps = 17/130 (13%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSE--TAMTDVRREVLI 177
Y ++ IG G+YG V +L+ AIK +++P E T RE+ I
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIK----------KISPFEHQTYCQRTLREIKI 72
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHF---YMVLEYVEGKWDNDGFGQPGAIGESMARKYLRD 234
+ +H NI+ + ++I P + Y+V + +E D + + +L
Sbjct: 73 LLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET--DLYKLLKTQHLSNDHICYFLYQ 130
Query: 235 IVSGLMYLHG 244
I+ GL Y+H
Sbjct: 131 ILRGLKYIHS 140
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 33.1 bits (74), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 54/128 (42%), Gaps = 9/128 (7%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
+ ++ +R IG GSY KV+L R + YA++ K ++ + + V+ E
Sbjct: 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVN------DDEDIDWVQTEKH 104
Query: 177 IMKMLQ-HPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
+ + HP +V L + V+EYV G + + E AR Y +I
Sbjct: 105 VFEQASNHPFLVGLHSCFQ--TESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEI 162
Query: 236 VSGLMYLH 243
L YLH
Sbjct: 163 SLALNYLH 170
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 33.1 bits (74), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 47/99 (47%), Gaps = 11/99 (11%)
Query: 116 MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREV 175
++ Y +++ IG+G+ G V ++ ++ AIK R ++T RE+
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-------RPFQNQTHAKRAYREL 74
Query: 176 LIMKMLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEG 210
++MK + H NI+ L+ V S Y+V+E ++
Sbjct: 75 VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA 113
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 33.1 bits (74), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 48/99 (48%), Gaps = 11/99 (11%)
Query: 116 MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREV 175
++ Y +++ IG+G+ G V ++ ++ AIK R ++T RE+
Sbjct: 23 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-------RPFQNQTHAKRAYREL 75
Query: 176 LIMKMLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEG 210
++MK + H NI++L+ V + Y+V+E ++
Sbjct: 76 VLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA 114
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 33.1 bits (74), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 48/99 (48%), Gaps = 11/99 (11%)
Query: 116 MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREV 175
++ Y +++ IG+G+ G V ++ ++ AIK R ++T RE+
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-------RPFQNQTHAKRAYREL 74
Query: 176 LIMKMLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEG 210
++MK + H NI++L+ V + Y+V+E ++
Sbjct: 75 VLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA 113
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 33.1 bits (74), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 48/99 (48%), Gaps = 11/99 (11%)
Query: 116 MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREV 175
++ Y +++ IG+G+ G V ++ ++ AIK R ++T RE+
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-------RPFQNQTHAKRAYREL 74
Query: 176 LIMKMLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEG 210
++MK + H NI++L+ V + Y+V+E ++
Sbjct: 75 VLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA 113
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 33.1 bits (74), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 48/99 (48%), Gaps = 11/99 (11%)
Query: 116 MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREV 175
++ Y +++ IG+G+ G V ++ ++ AIK R ++T RE+
Sbjct: 23 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-------RPFQNQTHAKRAYREL 75
Query: 176 LIMKMLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEG 210
++MK + H NI++L+ V + Y+V+E ++
Sbjct: 76 VLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA 114
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 56/130 (43%), Gaps = 17/130 (13%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSE--TAMTDVRREVLI 177
Y ++ IG G+YG V +L+ AIK +++P E T RE+ I
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIK----------KISPFEHQTYXQRTLREIKI 78
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHF---YMVLEYVEGKWDNDGFGQPGAIGESMARKYLRD 234
+ +H NI+ + ++I P + Y+V + +E D + + +L
Sbjct: 79 LLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET--DLYKLLKTQHLSNDHICYFLYQ 136
Query: 235 IVSGLMYLHG 244
I+ GL Y+H
Sbjct: 137 ILRGLKYIHS 146
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 48/99 (48%), Gaps = 11/99 (11%)
Query: 116 MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREV 175
++ Y +++ IG+G+ G V ++ ++ AIK R ++T RE+
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-------RPFQNQTHAKRAYREL 74
Query: 176 LIMKMLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEG 210
++MK + H NI++L+ V + Y+V+E ++
Sbjct: 75 VLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA 113
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 58/127 (45%), Gaps = 13/127 (10%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
+ + KIG GS+G+V + K AIK + + +E + D+++E+ ++
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKI--------IDLEEAEDEIEDIQQEITVLS 80
Query: 180 MLQHPNIVNLI-EVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSG 238
P + + D ++++EY+ G D +PG + E+ LR+I+ G
Sbjct: 81 QCDSPYVTKYYGSYLKD---TKLWIIMEYLGGGSALDLL-EPGPLDETQIATILREILKG 136
Query: 239 LMYLHGH 245
L YLH
Sbjct: 137 LDYLHSE 143
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 58/125 (46%), Gaps = 13/125 (10%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
+ + KIG GS+G+V + K AIK + + +E + D+++E+ ++
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKI--------IDLEEAEDEIEDIQQEITVLS 60
Query: 180 MLQHPNIVNLI-EVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSG 238
P + + D ++++EY+ G D +PG + E+ LR+I+ G
Sbjct: 61 QCDSPYVTKYYGSYLKD---TKLWIIMEYLGGGSALDLL-EPGPLDETQIATILREILKG 116
Query: 239 LMYLH 243
L YLH
Sbjct: 117 LDYLH 121
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 47/99 (47%), Gaps = 11/99 (11%)
Query: 116 MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREV 175
++ Y +++ IG+G+ G V ++ ++ AIK R ++T RE+
Sbjct: 16 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-------RPFQNQTHAKRAYREL 68
Query: 176 LIMKMLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEG 210
++MK + H NI+ L+ V S Y+V+E ++
Sbjct: 69 VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA 107
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 56/130 (43%), Gaps = 17/130 (13%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSE--TAMTDVRREVLI 177
Y ++ IG G+YG V +L+ AIK +++P E T RE+ I
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIK----------KISPFEHQTYCQRTLREIKI 78
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHF---YMVLEYVEGKWDNDGFGQPGAIGESMARKYLRD 234
+ +H NI+ + ++I P + Y+V + +E D + + +L
Sbjct: 79 LLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET--DLYKLLKTQHLSNDHICYFLYQ 136
Query: 235 IVSGLMYLHG 244
I+ GL Y+H
Sbjct: 137 ILRGLKYIHS 146
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 48/99 (48%), Gaps = 11/99 (11%)
Query: 116 MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREV 175
++ Y +++ IG+G+ G V ++ ++ AIK R ++T RE+
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-------RPFQNQTHAKRAYREL 74
Query: 176 LIMKMLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEG 210
++MK + H NI++L+ V + Y+V+E ++
Sbjct: 75 VLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA 113
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 48/99 (48%), Gaps = 11/99 (11%)
Query: 116 MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREV 175
++ Y +++ IG+G+ G V ++ ++ AIK R ++T RE+
Sbjct: 21 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-------RPFQNQTHAKRAYREL 73
Query: 176 LIMKMLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEG 210
++MK + H NI++L+ V + Y+V+E ++
Sbjct: 74 VLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA 112
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 50/131 (38%), Gaps = 18/131 (13%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
E V+ +G+G++G V +G+ I K L A + E LI
Sbjct: 15 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKI----LNETTGPKANVEFMDEALI 70
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHFYM------VLEYVEGKWDNDGFGQPGAIGESMARKY 231
M + HP++V L+ V P +LEYV DN IG + +
Sbjct: 71 MASMDHPHLVRLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDN--------IGSQLLLNW 122
Query: 232 LRDIVSGLMYL 242
I G+MYL
Sbjct: 123 CVQIAKGMMYL 133
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 48/99 (48%), Gaps = 11/99 (11%)
Query: 116 MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREV 175
++ Y +++ IG+G+ G V ++ ++ AIK R ++T RE+
Sbjct: 16 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-------RPFQNQTHAKRAYREL 68
Query: 176 LIMKMLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEG 210
++MK + H NI++L+ V + Y+V+E ++
Sbjct: 69 VLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA 107
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 48/99 (48%), Gaps = 11/99 (11%)
Query: 116 MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREV 175
++ Y +++ IG+G+ G V ++ ++ AIK R ++T RE+
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-------RPFQNQTHAKRAYREL 74
Query: 176 LIMKMLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEG 210
++MK++ H NI+ L+ V S Y+V+E ++
Sbjct: 75 VLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA 113
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 58/125 (46%), Gaps = 13/125 (10%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
+ + KIG GS+G+V + K AIK + + +E + D+++E+ ++
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKI--------IDLEEAEDEIEDIQQEITVLS 75
Query: 180 MLQHPNIVNLI-EVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSG 238
P + + D ++++EY+ G D +PG + E+ LR+I+ G
Sbjct: 76 QCDSPYVTKYYGSYLKD---TKLWIIMEYLGGGSALDLL-EPGPLDETQIATILREILKG 131
Query: 239 LMYLH 243
L YLH
Sbjct: 132 LDYLH 136
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 58/125 (46%), Gaps = 13/125 (10%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
+ + KIG GS+G+V + K AIK + + +E + D+++E+ ++
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKI--------IDLEEAEDEIEDIQQEITVLS 60
Query: 180 MLQHPNIVNLI-EVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSG 238
P + + D ++++EY+ G D +PG + E+ LR+I+ G
Sbjct: 61 QCDSPYVTKYYGSYLKD---TKLWIIMEYLGGGSALDLL-EPGPLDETQIATILREILKG 116
Query: 239 LMYLH 243
L YLH
Sbjct: 117 LDYLH 121
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 48/99 (48%), Gaps = 11/99 (11%)
Query: 116 MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREV 175
++ Y +++ IG+G+ G V ++ ++ AIK R ++T RE+
Sbjct: 16 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-------RPFQNQTHAKRAYREL 68
Query: 176 LIMKMLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEG 210
++MK + H NI++L+ V + Y+V+E ++
Sbjct: 69 VLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA 107
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 56/136 (41%), Gaps = 14/136 (10%)
Query: 114 TKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRR 173
++ E+ + KIG+G +G V LDG YAIK SK +A S + R
Sbjct: 3 SRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKR------SKKPLAGS-VDEQNALR 55
Query: 174 EVLIMKML-QHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYL 232
EV +L QH ++V + DH + EY G D + I L
Sbjct: 56 EVYAHAVLGQHSHVVRYFSAWAE--DDHMLIQNEYCNGGSLADAISENYRIMSYFKEAEL 113
Query: 233 RDIV----SGLMYLHG 244
+D++ GL Y+H
Sbjct: 114 KDLLLQVGRGLRYIHS 129
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 47/118 (39%), Gaps = 8/118 (6%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
+GAG +G+V R L K A + L+V +E D E IM HPN
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVA-----IKTLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 186 IVNLIEVIDDPNSDHFYMVLEYVE-GKWDNDGFGQPGAIGESMARKYLRDIVSGLMYL 242
I+ L V+ S +V E +E G D+ LR I SG+ YL
Sbjct: 108 IIRLEGVVT--KSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL 163
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 32.7 bits (73), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 16/86 (18%)
Query: 125 KIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHP 184
K+G G YG+V + A+K + + + + +E +MK ++HP
Sbjct: 39 KLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTME----------VEEFLKEAAVMKEIKHP 88
Query: 185 NIVNLIEV--IDDPNSDHFYMVLEYV 208
N+V L+ V ++ P FY+V EY+
Sbjct: 89 NLVQLLGVCTLEPP----FYIVTEYM 110
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 32.7 bits (73), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 48/99 (48%), Gaps = 11/99 (11%)
Query: 116 MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREV 175
++ Y +++ IG+G+ G V ++ ++ AIK R ++T RE+
Sbjct: 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-------RPFQNQTHAKRAYREL 67
Query: 176 LIMKMLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEG 210
++MK + H NI++L+ V + Y+V+E ++
Sbjct: 68 VLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA 106
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 32.7 bits (73), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 9/71 (12%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y+ ++K+G G + V L DG YA+K + + + +RE + +
Sbjct: 31 YLFIQKLGEGGFSYVDLVEGLHDGHFYALKRI---------LCHEQQDREEAQREADMHR 81
Query: 180 MLQHPNIVNLI 190
+ HPNI+ L+
Sbjct: 82 LFNHPNILRLV 92
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 32.7 bits (73), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 51/121 (42%), Gaps = 11/121 (9%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
IG GSYG V L K+ AIK + R+ + RE+ I+ L+
Sbjct: 36 IGRGSYGYVYLAYDKNANKNVAIKKVN-------RMFEDLIDCKRILREITILNRLKSDY 88
Query: 186 IVNLIEVI---DDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYL 242
I+ L ++I D D Y+VLE + F P + E + L +++ G ++
Sbjct: 89 IIRLHDLIIPEDLLKFDELYIVLEIADSDL-KKLFKTPIFLTEQHVKTILYNLLLGEKFI 147
Query: 243 H 243
H
Sbjct: 148 H 148
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 32.7 bits (73), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 56/130 (43%), Gaps = 17/130 (13%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSE--TAMTDVRREVLI 177
Y ++ IG G+YG V +L+ AIK +++P E T RE+ I
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIK----------KISPFEHQTYCQRTLREIKI 78
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHF---YMVLEYVEGKWDNDGFGQPGAIGESMARKYLRD 234
+ +H NI+ + ++I P + Y+V + +E D + + +L
Sbjct: 79 LLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET--DLYKLLKCQHLSNDHICYFLYQ 136
Query: 235 IVSGLMYLHG 244
I+ GL Y+H
Sbjct: 137 ILRGLKYIHS 146
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 32.7 bits (73), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 47/99 (47%), Gaps = 11/99 (11%)
Query: 116 MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREV 175
++ Y +++ IG+G+ G V ++ ++ AIK R ++T RE+
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-------RPFQNQTHAKRAYREL 74
Query: 176 LIMKMLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEG 210
++MK + H NI+ L+ V S Y+V+E ++
Sbjct: 75 VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA 113
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 32.7 bits (73), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 54/129 (41%), Gaps = 11/129 (8%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
+ Y+ IG GSYG V L K+ AIK + R+ + RE+ I
Sbjct: 26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVN-------RMFEDLIDCKRILREITI 78
Query: 178 MKMLQHPNIVNLIEVI---DDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRD 234
+ L+ I+ L ++I D D Y+VLE + F P + E + L +
Sbjct: 79 LNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIADSDL-KKLFKTPIFLTEEHIKTILYN 137
Query: 235 IVSGLMYLH 243
++ G ++H
Sbjct: 138 LLLGENFIH 146
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 32.7 bits (73), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 47/99 (47%), Gaps = 11/99 (11%)
Query: 116 MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREV 175
++ Y +++ IG+G+ G V ++ ++ AIK R ++T RE+
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-------RPFQNQTHAKRAYREL 74
Query: 176 LIMKMLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEG 210
++MK + H NI+ L+ V S Y+V+E ++
Sbjct: 75 VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA 113
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 32.7 bits (73), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 47/118 (39%), Gaps = 8/118 (6%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
+GAG +G+V R L K A + L+V +E D E IM HPN
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVA-----IKTLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 186 IVNLIEVIDDPNSDHFYMVLEYVE-GKWDNDGFGQPGAIGESMARKYLRDIVSGLMYL 242
I+ L V+ S +V E +E G D+ LR I SG+ YL
Sbjct: 108 IIRLEGVVT--KSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL 163
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 32.3 bits (72), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 53/116 (45%), Gaps = 12/116 (10%)
Query: 100 KESNKLIRSEDENGT-KMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSK 158
K N+ E + T ++ Y ++ IG+G+ G V ++ G + A+K
Sbjct: 5 KVDNQFYSVEVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLS------ 58
Query: 159 LRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEG 210
R ++T RE++++K + H NI++L+ V + Y+V+E ++
Sbjct: 59 -RPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA 113
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 32.3 bits (72), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 48/99 (48%), Gaps = 11/99 (11%)
Query: 116 MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREV 175
++ Y +++ IG+G+ G V ++ ++ AIK R ++T RE+
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-------RPFQNQTHAKRAYREL 74
Query: 176 LIMKMLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEG 210
++MK + H NI++L+ V + Y+V+E ++
Sbjct: 75 VLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA 113
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 32.3 bits (72), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 48/120 (40%), Gaps = 8/120 (6%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
+ +GAG +G+V R L K A + L+V +E D E IM H
Sbjct: 22 KVVGAGEFGEVCSGRLKLPSKKEISVA-----IKTLKVGYTEKQRRDFLGEASIMGQFDH 76
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVE-GKWDNDGFGQPGAIGESMARKYLRDIVSGLMYL 242
PNI+ L V+ S +V E +E G D+ LR I SG+ YL
Sbjct: 77 PNIIRLEGVVT--KSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL 134
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 32.3 bits (72), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 48/99 (48%), Gaps = 11/99 (11%)
Query: 116 MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREV 175
++ Y +++ IG+G+ G V ++ ++ AIK R ++T RE+
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-------RPFQNQTHAKRAYREL 74
Query: 176 LIMKMLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEG 210
++MK + H NI++L+ V + Y+V+E ++
Sbjct: 75 VLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA 113
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 32.3 bits (72), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/129 (21%), Positives = 56/129 (43%), Gaps = 13/129 (10%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K K S + + RE+ ++K
Sbjct: 36 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRT-------YRELRLLK 88
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 89 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 146
Query: 236 VSGLMYLHG 244
+ GL Y+H
Sbjct: 147 LRGLKYIHS 155
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 32.3 bits (72), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 57/124 (45%), Gaps = 12/124 (9%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ 182
+ ++G G++GKV Y++ K ++ A K +K SE + D E+ I+
Sbjct: 42 IGELGDGAFGKV--YKAQ--NKETSVLAAAKVIDTK-----SEEELEDYMVEIDILASCD 92
Query: 183 HPNIVNLIEVIDDPNSDHFYMVLEYVE-GKWDNDGFGQPGAIGESMARKYLRDIVSGLMY 241
HPNIV L++ N + ++++E+ G D + ES + + + L Y
Sbjct: 93 HPNIVKLLDAFYYEN--NLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNY 150
Query: 242 LHGH 245
LH +
Sbjct: 151 LHDN 154
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 32.3 bits (72), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 57/124 (45%), Gaps = 12/124 (9%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ 182
+ ++G G++GKV Y++ K ++ A K +K SE + D E+ I+
Sbjct: 42 IGELGDGAFGKV--YKAQ--NKETSVLAAAKVIDTK-----SEEELEDYMVEIDILASCD 92
Query: 183 HPNIVNLIEVIDDPNSDHFYMVLEYVE-GKWDNDGFGQPGAIGESMARKYLRDIVSGLMY 241
HPNIV L++ N + ++++E+ G D + ES + + + L Y
Sbjct: 93 HPNIVKLLDAFYYEN--NLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNY 150
Query: 242 LHGH 245
LH +
Sbjct: 151 LHDN 154
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 32.3 bits (72), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 48/99 (48%), Gaps = 11/99 (11%)
Query: 116 MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREV 175
++ Y +++ IG+G+ G V ++ ++ AIK R ++T RE+
Sbjct: 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-------RPFQNQTHAKRAYREL 67
Query: 176 LIMKMLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEG 210
++MK + H NI++L+ V + Y+V+E ++
Sbjct: 68 VLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA 106
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 32.3 bits (72), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 57/124 (45%), Gaps = 12/124 (9%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ 182
+ ++G G++GKV Y++ K ++ A K +K SE + D E+ I+
Sbjct: 42 IGELGDGAFGKV--YKAQ--NKETSVLAAAKVIDTK-----SEEELEDYMVEIDILASCD 92
Query: 183 HPNIVNLIEVIDDPNSDHFYMVLEYVE-GKWDNDGFGQPGAIGESMARKYLRDIVSGLMY 241
HPNIV L++ N + ++++E+ G D + ES + + + L Y
Sbjct: 93 HPNIVKLLDAFYYEN--NLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNY 150
Query: 242 LHGH 245
LH +
Sbjct: 151 LHDN 154
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 32.0 bits (71), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 56/130 (43%), Gaps = 17/130 (13%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSE--TAMTDVRREVLI 177
Y ++ IG G+YG V +++ AIK +++P E T RE+ I
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIK----------KISPFEHQTYCQRTLREIKI 76
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHF---YMVLEYVEGKWDNDGFGQPGAIGESMARKYLRD 234
+ +H NI+ + ++I P + Y+V + +E D + + +L
Sbjct: 77 LLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET--DLYKLLKTQHLSNDHICYFLYQ 134
Query: 235 IVSGLMYLHG 244
I+ GL Y+H
Sbjct: 135 ILRGLKYIHS 144
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 32.0 bits (71), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 56/130 (43%), Gaps = 17/130 (13%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSE--TAMTDVRREVLI 177
Y ++ IG G+YG V +L+ AI+ +++P E T RE+ I
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIR----------KISPFEHQTYCQRTLREIKI 78
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHF---YMVLEYVEGKWDNDGFGQPGAIGESMARKYLRD 234
+ +H NI+ + ++I P + Y+V + +E D + + +L
Sbjct: 79 LLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET--DLYKLLKTQHLSNDHICYFLYQ 136
Query: 235 IVSGLMYLHG 244
I+ GL Y+H
Sbjct: 137 ILRGLKYIHS 146
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 32.0 bits (71), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 26/129 (20%), Positives = 56/129 (43%), Gaps = 13/129 (10%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 20 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 72
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N + + + + + I
Sbjct: 73 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN--IVKCAKLTDDHVQFLIYQI 130
Query: 236 VSGLMYLHG 244
+ GL Y+H
Sbjct: 131 LRGLKYIHS 139
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 32.0 bits (71), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 18/87 (20%)
Query: 125 KIGAGSYGKV---VLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML 181
K+G G YG+V V + SL A+K + + + + +E +MK +
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLT---VAVKTLKEDTME----------VEEFLKEAAVMKEI 66
Query: 182 QHPNIVNLIEVIDDPNSDHFYMVLEYV 208
+HPN+V L+ V FY+++E++
Sbjct: 67 KHPNLVQLLGVCT--REPPFYIIIEFM 91
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 32.0 bits (71), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 18/87 (20%)
Query: 125 KIGAGSYGKV---VLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML 181
K+G G YG+V V + SL A+K + + + + +E +MK +
Sbjct: 21 KLGGGQYGEVYEGVWKKYSLT---VAVKTLKEDTME----------VEEFLKEAAVMKEI 67
Query: 182 QHPNIVNLIEVIDDPNSDHFYMVLEYV 208
+HPN+V L+ V FY+++E++
Sbjct: 68 KHPNLVQLLGVCT--REPPFYIIIEFM 92
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 32.0 bits (71), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 18/87 (20%)
Query: 125 KIGAGSYGKV---VLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML 181
K+G G YG+V V + SL A+K + + + + +E +MK +
Sbjct: 18 KLGGGQYGEVYEGVWKKYSLT---VAVKTLKEDTME----------VEEFLKEAAVMKEI 64
Query: 182 QHPNIVNLIEVIDDPNSDHFYMVLEYV 208
+HPN+V L+ V FY+++E++
Sbjct: 65 KHPNLVQLLGVCT--REPPFYIIIEFM 89
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 32.0 bits (71), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 56/130 (43%), Gaps = 17/130 (13%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSE--TAMTDVRREVLI 177
Y ++ IG G+YG V +++ AIK +++P E T RE+ I
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIK----------KISPFEHQTYCQRTLREIKI 74
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHF---YMVLEYVEGKWDNDGFGQPGAIGESMARKYLRD 234
+ +H NI+ + ++I P + Y+V + +E D + + +L
Sbjct: 75 LLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET--DLYKLLKTQHLSNDHICYFLYQ 132
Query: 235 IVSGLMYLHG 244
I+ GL Y+H
Sbjct: 133 ILRGLKYIHS 142
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 32.0 bits (71), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 56/130 (43%), Gaps = 17/130 (13%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSE--TAMTDVRREVLI 177
Y ++ IG G+YG V +++ AIK +++P E T RE+ I
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIK----------KISPFEHQTYCQRTLREIKI 76
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHF---YMVLEYVEGKWDNDGFGQPGAIGESMARKYLRD 234
+ +H NI+ + ++I P + Y+V + +E D + + +L
Sbjct: 77 LLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET--DLYKLLKTQHLSNDHICYFLYQ 134
Query: 235 IVSGLMYLHG 244
I+ GL Y+H
Sbjct: 135 ILRGLKYIHS 144
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 32.0 bits (71), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 57/133 (42%), Gaps = 6/133 (4%)
Query: 116 MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIK-AFHKSHLSKLRVAPSETAMTD-VRR 173
M + Y R I +GSYG V S +G AIK F+ + S++ + V R
Sbjct: 20 MQSPYTVQRFISSGSYGAVCAGVDS-EGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLR 78
Query: 174 EVLIMKMLQHPNIVNLIEV---IDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARK 230
E+ ++ HPNI+ L ++ ++P Y+V E + Q I +
Sbjct: 79 EIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQY 138
Query: 231 YLRDIVSGLMYLH 243
++ I+ GL LH
Sbjct: 139 FMYHILLGLHVLH 151
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 31.6 bits (70), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 56/130 (43%), Gaps = 17/130 (13%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSE--TAMTDVRREVLI 177
Y ++ IG G+YG V +++ AIK +++P E T RE+ I
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIK----------KISPFEHQTYCQRTLREIKI 76
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHF---YMVLEYVEGKWDNDGFGQPGAIGESMARKYLRD 234
+ +H NI+ + ++I P + Y+V + +E D + + +L
Sbjct: 77 LLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET--DLYKLLKTQHLSNDHICYFLYQ 134
Query: 235 IVSGLMYLHG 244
I+ GL Y+H
Sbjct: 135 ILRGLKYIHS 144
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 31.6 bits (70), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 53/133 (39%), Gaps = 6/133 (4%)
Query: 116 MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHK--SHLSKLRVAPSETAMTDVRR 173
M + Y R I +GSYG V S +G AIK S + + V R
Sbjct: 20 MQSPYTVQRFISSGSYGAVCAGVDS-EGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLR 78
Query: 174 EVLIMKMLQHPNIVNLIEV---IDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARK 230
E+ ++ HPNI+ L ++ ++P Y+V E + Q I +
Sbjct: 79 EIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQY 138
Query: 231 YLRDIVSGLMYLH 243
++ I+ GL LH
Sbjct: 139 FMYHILLGLHVLH 151
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 31.6 bits (70), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 18/87 (20%)
Query: 125 KIGAGSYGKV---VLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML 181
K+G G YG+V V + SL A+K + + + + +E +MK +
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLT---VAVKTLKEDTME----------VEEFLKEAAVMKEI 66
Query: 182 QHPNIVNLIEVIDDPNSDHFYMVLEYV 208
+HPN+V L+ V FY+++E++
Sbjct: 67 KHPNLVQLLGVCT--REPPFYIIIEFM 91
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 31.6 bits (70), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 27/129 (20%), Positives = 56/129 (43%), Gaps = 13/129 (10%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 76
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQ--KLTDDHVQFLIYQI 134
Query: 236 VSGLMYLHG 244
+ GL Y+H
Sbjct: 135 LRGLKYIHS 143
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 31.6 bits (70), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 41/97 (42%), Gaps = 14/97 (14%)
Query: 117 INEYVHVRK---IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRR 173
+N + V K +G G +G+V + G A K + +V+
Sbjct: 85 VNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKD---------KEEVKN 135
Query: 174 EVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEG 210
E+ +M L H N++ L + + N +V+EYV+G
Sbjct: 136 EISVMNQLDHANLIQLYDAFESKND--IVLVMEYVDG 170
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 31.6 bits (70), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 56/130 (43%), Gaps = 17/130 (13%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSE--TAMTDVRREVLI 177
Y ++ IG G+YG V +++ AIK +++P E T RE+ I
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIK----------KISPFEHQTYCQRTLREIKI 94
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHF---YMVLEYVEGKWDNDGFGQPGAIGESMARKYLRD 234
+ +H NI+ + ++I P + Y+V + +E D + + +L
Sbjct: 95 LLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET--DLYKLLKTQHLSNDHICYFLYQ 152
Query: 235 IVSGLMYLHG 244
I+ GL Y+H
Sbjct: 153 ILRGLKYIHS 162
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 31.6 bits (70), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 18/87 (20%)
Query: 125 KIGAGSYGKV---VLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML 181
K+G G YG+V V + SL A+K + + + + +E +MK +
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLT---VAVKTLKEDTME----------VEEFLKEAAVMKEI 71
Query: 182 QHPNIVNLIEVIDDPNSDHFYMVLEYV 208
+HPN+V L+ V FY+++E++
Sbjct: 72 KHPNLVQLLGVCT--REPPFYIIIEFM 96
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 31.6 bits (70), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 32/160 (20%), Positives = 68/160 (42%), Gaps = 15/160 (9%)
Query: 91 GLICRQFPVKESNKLIRSEDENGT--KMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAI 148
GL+ R + + ++ N T ++ Y ++ +G+G+YG V + G A+
Sbjct: 13 GLVPRGSHMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAV 72
Query: 149 KAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNS----DHFYMV 204
K + S + + RE+ ++K ++H N++ L++V S + Y+V
Sbjct: 73 KKLSRPFQSIIHAKRT-------YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 125
Query: 205 LEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHG 244
+ +N Q + + + + I+ GL Y+H
Sbjct: 126 THLMGADLNNIVKCQ--KLTDDHVQFLIYQILRGLKYIHS 163
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 31.6 bits (70), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 51/128 (39%), Gaps = 9/128 (7%)
Query: 116 MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREV 175
M +EY IG G++ V G YA K + LS + RE
Sbjct: 2 MTDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSA-------RDHQKLEREA 54
Query: 176 LIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
I ++L+H NIV L + I + Y+V + V G + E+ A ++ I
Sbjct: 55 RICRLLKHSNIVRLHDSISEEG--FHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQI 112
Query: 236 VSGLMYLH 243
+ +++ H
Sbjct: 113 LEAVLHCH 120
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 31.6 bits (70), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 56/130 (43%), Gaps = 17/130 (13%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSE--TAMTDVRREVLI 177
Y ++ IG G+YG V +++ AIK +++P E T RE+ I
Sbjct: 33 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIK----------KISPFEHQTYCQRTLREIKI 82
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHF---YMVLEYVEGKWDNDGFGQPGAIGESMARKYLRD 234
+ +H NI+ + ++I P + Y+V + +E D + + +L
Sbjct: 83 LLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET--DLYKLLKTQHLSNDHICYFLYQ 140
Query: 235 IVSGLMYLHG 244
I+ GL Y+H
Sbjct: 141 ILRGLKYIHS 150
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 31.6 bits (70), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 56/130 (43%), Gaps = 17/130 (13%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSE--TAMTDVRREVLI 177
Y ++ IG G+YG V +++ AIK +++P E T RE+ I
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIK----------KISPFEHQTYCQRTLREIKI 74
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHF---YMVLEYVEGKWDNDGFGQPGAIGESMARKYLRD 234
+ +H NI+ + ++I P + Y+V + +E D + + +L
Sbjct: 75 LLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET--DLYKLLKTQHLSNDHICYFLYQ 132
Query: 235 IVSGLMYLHG 244
I+ GL Y+H
Sbjct: 133 ILRGLKYIHS 142
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 31.6 bits (70), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 56/130 (43%), Gaps = 17/130 (13%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSE--TAMTDVRREVLI 177
Y ++ IG G+YG V +++ AIK +++P E T RE+ I
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIK----------KISPFEHQTYCQRTLREIKI 74
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHF---YMVLEYVEGKWDNDGFGQPGAIGESMARKYLRD 234
+ +H NI+ + ++I P + Y+V + +E D + + +L
Sbjct: 75 LLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET--DLYKLLKTQHLSNDHICYFLYQ 132
Query: 235 IVSGLMYLHG 244
I+ GL Y+H
Sbjct: 133 ILRGLKYIHS 142
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 31.6 bits (70), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 32/160 (20%), Positives = 68/160 (42%), Gaps = 15/160 (9%)
Query: 91 GLICRQFPVKESNKLIRSEDENGT--KMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAI 148
GL+ R + + ++ N T ++ Y ++ +G+G+YG V + G A+
Sbjct: 13 GLVPRGSHMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAV 72
Query: 149 KAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNS----DHFYMV 204
K + S + + RE+ ++K ++H N++ L++V S + Y+V
Sbjct: 73 KKLSRPFQSIIHAKRT-------YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 125
Query: 205 LEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHG 244
+ +N Q + + + + I+ GL Y+H
Sbjct: 126 THLMGADLNNIVKCQ--KLTDDHVQFLIYQILRGLKYIHS 163
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 31.6 bits (70), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 55/133 (41%), Gaps = 20/133 (15%)
Query: 117 INEYVHVRKIGAGSYGKVVL--YRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRRE 174
+ E ++ IG G +G V+L YR G A+K ++ +A E
Sbjct: 20 MKELKLLQTIGKGEFGDVMLGDYR----GNKVAVKCIKNDATAQAFLA-----------E 64
Query: 175 VLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPG--AIGESMARKYL 232
+M L+H N+V L+ VI + Y+V EY+ D G +G K+
Sbjct: 65 ASVMTQLRHSNLVQLLGVIVEEKGG-LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFS 123
Query: 233 RDIVSGLMYLHGH 245
D+ + YL G+
Sbjct: 124 LDVCEAMEYLEGN 136
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 31.6 bits (70), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 32/160 (20%), Positives = 68/160 (42%), Gaps = 15/160 (9%)
Query: 91 GLICRQFPVKESNKLIRSEDENGT--KMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAI 148
GL+ R + + ++ N T ++ Y ++ +G+G+YG V + G A+
Sbjct: 12 GLVPRGSHMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAV 71
Query: 149 KAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNS----DHFYMV 204
K + S + + RE+ ++K ++H N++ L++V S + Y+V
Sbjct: 72 KKLSRPFQSIIHAKRT-------YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 124
Query: 205 LEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHG 244
+ +N Q + + + + I+ GL Y+H
Sbjct: 125 THLMGADLNNIVKCQ--KLTDDHVQFLIYQILRGLKYIHS 162
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 31.6 bits (70), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 40/93 (43%), Gaps = 27/93 (29%)
Query: 126 IGAGSYGKVVLYRSSLDG----------KHYAIKAFHKSHLSKLRVAPSETAMTDVRREV 175
IG G++G+V+ R DG K YA K H+ +L V
Sbjct: 33 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEV-------------- 78
Query: 176 LIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYV 208
+ K+ HPNI+NL+ + + + Y+ +EY
Sbjct: 79 -LCKLGHHPNIINLLGACE--HRGYLYLAIEYA 108
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 31.6 bits (70), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 40/93 (43%), Gaps = 27/93 (29%)
Query: 126 IGAGSYGKVVLYRSSLDG----------KHYAIKAFHKSHLSKLRVAPSETAMTDVRREV 175
IG G++G+V+ R DG K YA K H+ +L V
Sbjct: 30 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEV-------------- 75
Query: 176 LIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYV 208
+ K+ HPNI+NL+ + + + Y+ +EY
Sbjct: 76 -LCKLGHHPNIINLLGACE--HRGYLYLAIEYA 105
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 31.6 bits (70), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 55/133 (41%), Gaps = 20/133 (15%)
Query: 117 INEYVHVRKIGAGSYGKVVL--YRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRRE 174
+ E ++ IG G +G V+L YR G A+K ++ +A E
Sbjct: 11 MKELKLLQTIGKGEFGDVMLGDYR----GNKVAVKCIKNDATAQAFLA-----------E 55
Query: 175 VLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPG--AIGESMARKYL 232
+M L+H N+V L+ VI + Y+V EY+ D G +G K+
Sbjct: 56 ASVMTQLRHSNLVQLLGVIVEEKGG-LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFS 114
Query: 233 RDIVSGLMYLHGH 245
D+ + YL G+
Sbjct: 115 LDVCEAMEYLEGN 127
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 31.6 bits (70), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 47/99 (47%), Gaps = 11/99 (11%)
Query: 116 MINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREV 175
++ Y ++ IG+G+ G V ++ G + A+K R ++T RE+
Sbjct: 20 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLS-------RPFQNQTHAKRAYREL 72
Query: 176 LIMKMLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEG 210
+++K + H NI++L+ V + Y+V+E ++
Sbjct: 73 VLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA 111
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 31.6 bits (70), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 51/127 (40%), Gaps = 15/127 (11%)
Query: 121 VHVRKI-GAGSYGKVVLYRSSLDGKH---YAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
+H+ KI G+G G+V R + G+ AIKA + + R D E
Sbjct: 51 IHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQR--------RDFLSEAS 102
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVE-GKWDNDGFGQPGAIGESMARKYLRDI 235
IM HPNI+ L V+ +V EY+E G D G LR +
Sbjct: 103 IMGQFDHPNIIRLEGVVT--RGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGV 160
Query: 236 VSGLMYL 242
+G+ YL
Sbjct: 161 GAGMRYL 167
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 31.6 bits (70), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 27/129 (20%), Positives = 56/129 (43%), Gaps = 13/129 (10%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 76
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 134
Query: 236 VSGLMYLHG 244
+ GL Y+H
Sbjct: 135 LRGLKYIHS 143
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 31.6 bits (70), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 28/129 (21%), Positives = 56/129 (43%), Gaps = 13/129 (10%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ IG+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 29 YQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 81
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 82 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 139
Query: 236 VSGLMYLHG 244
+ GL Y+H
Sbjct: 140 LRGLKYIHS 148
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 31.2 bits (69), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 27/129 (20%), Positives = 56/129 (43%), Gaps = 13/129 (10%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 76
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 134
Query: 236 VSGLMYLHG 244
+ GL Y+H
Sbjct: 135 LRGLKYIHS 143
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 31.2 bits (69), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 55/133 (41%), Gaps = 20/133 (15%)
Query: 117 INEYVHVRKIGAGSYGKVVL--YRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRRE 174
+ E ++ IG G +G V+L YR G A+K ++ +A E
Sbjct: 5 MKELKLLQTIGKGEFGDVMLGDYR----GNKVAVKCIKNDATAQAFLA-----------E 49
Query: 175 VLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPG--AIGESMARKYL 232
+M L+H N+V L+ VI + Y+V EY+ D G +G K+
Sbjct: 50 ASVMTQLRHSNLVQLLGVIVEEKGG-LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFS 108
Query: 233 RDIVSGLMYLHGH 245
D+ + YL G+
Sbjct: 109 LDVCEAMEYLEGN 121
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 31.2 bits (69), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 40/93 (43%), Gaps = 27/93 (29%)
Query: 126 IGAGSYGKVVLYRSSLDG----------KHYAIKAFHKSHLSKLRVAPSETAMTDVRREV 175
IG G++G+V+ R DG K YA K H+ +L V
Sbjct: 23 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEV-------------- 68
Query: 176 LIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYV 208
+ K+ HPNI+NL+ + + + Y+ +EY
Sbjct: 69 -LCKLGHHPNIINLLGACE--HRGYLYLAIEYA 98
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 31.2 bits (69), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 51/127 (40%), Gaps = 15/127 (11%)
Query: 121 VHVRKI-GAGSYGKVVLYRSSLDGKH---YAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
+H+ KI G+G G+V R + G+ AIKA + + R D E
Sbjct: 51 IHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQR--------RDFLSEAS 102
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVE-GKWDNDGFGQPGAIGESMARKYLRDI 235
IM HPNI+ L V+ +V EY+E G D G LR +
Sbjct: 103 IMGQFDHPNIIRLEGVVT--RGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGV 160
Query: 236 VSGLMYL 242
+G+ YL
Sbjct: 161 GAGMRYL 167
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 31.2 bits (69), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 26/129 (20%), Positives = 56/129 (43%), Gaps = 13/129 (10%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 76
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N + + + + + I
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN--IVKXQKLTDDHVQFLIYQI 134
Query: 236 VSGLMYLHG 244
+ GL Y+H
Sbjct: 135 LRGLKYIHS 143
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 31.2 bits (69), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 27/40 (67%)
Query: 111 ENGTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKA 150
+ G + N ++ +RK+G G++G+V+L + + K+YA+K
Sbjct: 28 KKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKV 67
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 31.2 bits (69), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 27/129 (20%), Positives = 56/129 (43%), Gaps = 13/129 (10%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 20 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 72
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 73 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 130
Query: 236 VSGLMYLHG 244
+ GL Y+H
Sbjct: 131 LRGLKYIHS 139
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 31.2 bits (69), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 56/130 (43%), Gaps = 17/130 (13%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSE--TAMTDVRREVLI 177
Y ++ IG G+YG V +++ AIK +++P E T RE+ I
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIK----------KISPFEHQTYCQRTLREIKI 74
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHF---YMVLEYVEGKWDNDGFGQPGAIGESMARKYLRD 234
+ +H NI+ + ++I P + Y+V + +E D + + +L
Sbjct: 75 LLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET--DLYKLLKTQHLSNDHICYFLYQ 132
Query: 235 IVSGLMYLHG 244
I+ GL Y+H
Sbjct: 133 ILRGLKYIHS 142
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 31.2 bits (69), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 27/126 (21%), Positives = 54/126 (42%), Gaps = 13/126 (10%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ 182
+R +G+G+YG V + + A+K + S + RE+ ++K L+
Sbjct: 33 LRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHA-------RRTYRELRLLKHLK 85
Query: 183 HPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSG 238
H N++ L++V S Y+V + +N Q A+ + + + ++ G
Sbjct: 86 HENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQ--ALSDEHVQFLVYQLLRG 143
Query: 239 LMYLHG 244
L Y+H
Sbjct: 144 LKYIHS 149
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 31.2 bits (69), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 27/129 (20%), Positives = 56/129 (43%), Gaps = 13/129 (10%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 76
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 134
Query: 236 VSGLMYLHG 244
+ GL Y+H
Sbjct: 135 LRGLKYIHS 143
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 31.2 bits (69), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 32/160 (20%), Positives = 68/160 (42%), Gaps = 15/160 (9%)
Query: 91 GLICRQFPVKESNKLIRSEDENGT--KMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAI 148
GL+ R + + ++ N T ++ Y ++ +G+G+YG V + G A+
Sbjct: 12 GLVPRGSHMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAV 71
Query: 149 KAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNS----DHFYMV 204
K + S + + RE+ ++K ++H N++ L++V S + Y+V
Sbjct: 72 KKLSRPFQSIIHAKRT-------YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 124
Query: 205 LEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHG 244
+ +N Q + + + + I+ GL Y+H
Sbjct: 125 THLMGADLNNIVKCQ--KLTDDHVQFLIYQILRGLKYIHS 162
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 31.2 bits (69), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 32/160 (20%), Positives = 68/160 (42%), Gaps = 15/160 (9%)
Query: 91 GLICRQFPVKESNKLIRSEDENGT--KMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAI 148
GL+ R + + ++ N T ++ Y ++ +G+G+YG V + G A+
Sbjct: 13 GLVPRGSHMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAV 72
Query: 149 KAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNS----DHFYMV 204
K + S + + RE+ ++K ++H N++ L++V S + Y+V
Sbjct: 73 KKLSRPFQSIIHAKRT-------YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 125
Query: 205 LEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHG 244
+ +N Q + + + + I+ GL Y+H
Sbjct: 126 THLMGADLNNIVKCQ--KLTDDHVQFLIYQILRGLKYIHS 163
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 31.2 bits (69), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 27/129 (20%), Positives = 56/129 (43%), Gaps = 13/129 (10%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 76
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 134
Query: 236 VSGLMYLHG 244
+ GL Y+H
Sbjct: 135 LRGLKYIHS 143
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 31.2 bits (69), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 27/129 (20%), Positives = 56/129 (43%), Gaps = 13/129 (10%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 20 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 72
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 73 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 130
Query: 236 VSGLMYLHG 244
+ GL Y+H
Sbjct: 131 LRGLKYIHS 139
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 31.2 bits (69), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 27/129 (20%), Positives = 56/129 (43%), Gaps = 13/129 (10%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 36 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 88
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 89 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 146
Query: 236 VSGLMYLHG 244
+ GL Y+H
Sbjct: 147 LRGLKYIHS 155
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 31.2 bits (69), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 27/129 (20%), Positives = 56/129 (43%), Gaps = 13/129 (10%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 36 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 88
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 89 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 146
Query: 236 VSGLMYLHG 244
+ GL Y+H
Sbjct: 147 LRGLKYIHS 155
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 31.2 bits (69), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 27/129 (20%), Positives = 56/129 (43%), Gaps = 13/129 (10%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 34 YQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 86
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 87 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 144
Query: 236 VSGLMYLHG 244
+ GL Y+H
Sbjct: 145 LRGLKYIHS 153
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 31.2 bits (69), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 27/129 (20%), Positives = 56/129 (43%), Gaps = 13/129 (10%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 76
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 134
Query: 236 VSGLMYLHG 244
+ GL Y+H
Sbjct: 135 LRGLKYIHS 143
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 31.2 bits (69), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 27/129 (20%), Positives = 56/129 (43%), Gaps = 13/129 (10%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 26 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 78
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 79 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 136
Query: 236 VSGLMYLHG 244
+ GL Y+H
Sbjct: 137 LRGLKYIHS 145
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 31.2 bits (69), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 27/129 (20%), Positives = 56/129 (43%), Gaps = 13/129 (10%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 26 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 78
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 79 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 136
Query: 236 VSGLMYLHG 244
+ GL Y+H
Sbjct: 137 LRGLKYIHS 145
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 31.2 bits (69), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 27/129 (20%), Positives = 56/129 (43%), Gaps = 13/129 (10%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 76
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 134
Query: 236 VSGLMYLHG 244
+ GL Y+H
Sbjct: 135 LRGLKYIHS 143
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 31.2 bits (69), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 27/129 (20%), Positives = 56/129 (43%), Gaps = 13/129 (10%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 76
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 134
Query: 236 VSGLMYLHG 244
+ GL Y+H
Sbjct: 135 LRGLKYIHS 143
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 31.2 bits (69), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 27/129 (20%), Positives = 56/129 (43%), Gaps = 13/129 (10%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 47 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 99
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 100 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 157
Query: 236 VSGLMYLHG 244
+ GL Y+H
Sbjct: 158 LRGLKYIHS 166
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 31.2 bits (69), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 27/129 (20%), Positives = 56/129 (43%), Gaps = 13/129 (10%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 26 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 78
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 79 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 136
Query: 236 VSGLMYLHG 244
+ GL Y+H
Sbjct: 137 LRGLKYIHS 145
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 31.2 bits (69), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 27/129 (20%), Positives = 56/129 (43%), Gaps = 13/129 (10%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 76
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 134
Query: 236 VSGLMYLHG 244
+ GL Y+H
Sbjct: 135 LRGLKYIHS 143
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 31.2 bits (69), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 27/129 (20%), Positives = 56/129 (43%), Gaps = 13/129 (10%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 76
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 134
Query: 236 VSGLMYLHG 244
+ GL Y+H
Sbjct: 135 LRGLKYIHS 143
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 31.2 bits (69), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 27/129 (20%), Positives = 56/129 (43%), Gaps = 13/129 (10%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 35 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 87
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 88 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 145
Query: 236 VSGLMYLHG 244
+ GL Y+H
Sbjct: 146 LRGLKYIHS 154
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 31.2 bits (69), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 27/129 (20%), Positives = 56/129 (43%), Gaps = 13/129 (10%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 82
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 83 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 140
Query: 236 VSGLMYLHG 244
+ GL Y+H
Sbjct: 141 LRGLKYIHS 149
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 31.2 bits (69), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 27/129 (20%), Positives = 56/129 (43%), Gaps = 13/129 (10%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 76
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 134
Query: 236 VSGLMYLHG 244
+ GL Y+H
Sbjct: 135 LRGLKYIHS 143
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 31.2 bits (69), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 27/129 (20%), Positives = 56/129 (43%), Gaps = 13/129 (10%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 82
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 83 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 140
Query: 236 VSGLMYLHG 244
+ GL Y+H
Sbjct: 141 LRGLKYIHS 149
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 31.2 bits (69), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 27/129 (20%), Positives = 56/129 (43%), Gaps = 13/129 (10%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 76
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 134
Query: 236 VSGLMYLHG 244
+ GL Y+H
Sbjct: 135 LRGLKYIHS 143
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 31.2 bits (69), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 27/129 (20%), Positives = 56/129 (43%), Gaps = 13/129 (10%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 76
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 134
Query: 236 VSGLMYLHG 244
+ GL Y+H
Sbjct: 135 LRGLKYIHS 143
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 31.2 bits (69), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 27/129 (20%), Positives = 56/129 (43%), Gaps = 13/129 (10%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 76
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 134
Query: 236 VSGLMYLHG 244
+ GL Y+H
Sbjct: 135 LRGLKYIHS 143
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 31.2 bits (69), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 18/87 (20%)
Query: 125 KIGAGSYGKV---VLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML 181
K+G G YG+V V + SL A+K + + + + +E +MK +
Sbjct: 18 KLGGGQYGEVYEGVWKKYSLT---VAVKTLKEDTME----------VEEFLKEAAVMKEI 64
Query: 182 QHPNIVNLIEVIDDPNSDHFYMVLEYV 208
+HPN+V L+ V FY++ E++
Sbjct: 65 KHPNLVQLLGVCT--REPPFYIITEFM 89
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 31.2 bits (69), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 27/129 (20%), Positives = 56/129 (43%), Gaps = 13/129 (10%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 76
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 134
Query: 236 VSGLMYLHG 244
+ GL Y+H
Sbjct: 135 LRGLKYIHS 143
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 31.2 bits (69), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 27/129 (20%), Positives = 56/129 (43%), Gaps = 13/129 (10%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 47 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 99
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 100 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 157
Query: 236 VSGLMYLHG 244
+ GL Y+H
Sbjct: 158 LRGLKYIHS 166
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 31.2 bits (69), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 27/129 (20%), Positives = 56/129 (43%), Gaps = 13/129 (10%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 29 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 81
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 82 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 139
Query: 236 VSGLMYLHG 244
+ GL Y+H
Sbjct: 140 LRGLKYIHS 148
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 31.2 bits (69), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 27/129 (20%), Positives = 56/129 (43%), Gaps = 13/129 (10%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 23 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 75
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 76 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 133
Query: 236 VSGLMYLHG 244
+ GL Y+H
Sbjct: 134 LRGLKYIHS 142
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 31.2 bits (69), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 27/129 (20%), Positives = 56/129 (43%), Gaps = 13/129 (10%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 83
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 84 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 141
Query: 236 VSGLMYLHG 244
+ GL Y+H
Sbjct: 142 LRGLKYIHS 150
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 31.2 bits (69), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 27/129 (20%), Positives = 56/129 (43%), Gaps = 13/129 (10%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 83
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 84 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 141
Query: 236 VSGLMYLHG 244
+ GL Y+H
Sbjct: 142 LRGLKYIHS 150
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 31.2 bits (69), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 27/129 (20%), Positives = 56/129 (43%), Gaps = 13/129 (10%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 83
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 84 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 141
Query: 236 VSGLMYLHG 244
+ GL Y+H
Sbjct: 142 LRGLKYIHS 150
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 31.2 bits (69), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 27/129 (20%), Positives = 56/129 (43%), Gaps = 13/129 (10%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 22 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 74
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 75 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 132
Query: 236 VSGLMYLHG 244
+ GL Y+H
Sbjct: 133 LRGLKYIHS 141
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 31.2 bits (69), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 27/129 (20%), Positives = 56/129 (43%), Gaps = 13/129 (10%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 76
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 134
Query: 236 VSGLMYLHG 244
+ GL Y+H
Sbjct: 135 LRGLKYIHS 143
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 30.8 bits (68), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 27/129 (20%), Positives = 56/129 (43%), Gaps = 13/129 (10%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 76
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 134
Query: 236 VSGLMYLHG 244
+ GL Y+H
Sbjct: 135 LRGLKYIHS 143
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 30.8 bits (68), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 27/129 (20%), Positives = 56/129 (43%), Gaps = 13/129 (10%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 76
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 134
Query: 236 VSGLMYLHG 244
+ GL Y+H
Sbjct: 135 LRGLKYIHS 143
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 30.8 bits (68), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 27/129 (20%), Positives = 56/129 (43%), Gaps = 13/129 (10%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 21 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 73
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 74 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 131
Query: 236 VSGLMYLHG 244
+ GL Y+H
Sbjct: 132 LRGLKYIHS 140
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 30.8 bits (68), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 27/129 (20%), Positives = 56/129 (43%), Gaps = 13/129 (10%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 21 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 73
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 74 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 131
Query: 236 VSGLMYLHG 244
+ GL Y+H
Sbjct: 132 LRGLKYIHS 140
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 30.8 bits (68), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 26/129 (20%), Positives = 56/129 (43%), Gaps = 13/129 (10%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 76
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N + + + + + I
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN--IVKXQKLTDDHVQFLIYQI 134
Query: 236 VSGLMYLHG 244
+ GL Y+H
Sbjct: 135 LRGLKYIHS 143
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 30.8 bits (68), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 27/129 (20%), Positives = 56/129 (43%), Gaps = 13/129 (10%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 83
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 84 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 141
Query: 236 VSGLMYLHG 244
+ GL Y+H
Sbjct: 142 LRGLKYIHS 150
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 30.8 bits (68), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 27/129 (20%), Positives = 56/129 (43%), Gaps = 13/129 (10%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 76
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 134
Query: 236 VSGLMYLHG 244
+ GL Y+H
Sbjct: 135 LRGLKYIHS 143
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 30.8 bits (68), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 18/87 (20%)
Query: 125 KIGAGSYGKV---VLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML 181
K+G G YG+V V + SL A+K + + + + +E +MK +
Sbjct: 21 KLGGGQYGEVYEGVWKKYSLT---VAVKTLKEDTME----------VEEFLKEAAVMKEI 67
Query: 182 QHPNIVNLIEVIDDPNSDHFYMVLEYV 208
+HPN+V L+ V FY++ E++
Sbjct: 68 KHPNLVQLLGVCT--REPPFYIITEFM 92
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 30.8 bits (68), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 27/129 (20%), Positives = 56/129 (43%), Gaps = 13/129 (10%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 35 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 87
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 88 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 145
Query: 236 VSGLMYLHG 244
+ GL Y+H
Sbjct: 146 LRGLKYIHS 154
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 30.8 bits (68), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 18/87 (20%)
Query: 125 KIGAGSYGKV---VLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML 181
K+G G YG+V V + SL A+K + + + + +E +MK +
Sbjct: 266 KLGGGQYGEVYEGVWKKYSLT---VAVKTLKEDTME----------VEEFLKEAAVMKEI 312
Query: 182 QHPNIVNLIEVIDDPNSDHFYMVLEYV 208
+HPN+V L+ V FY++ E++
Sbjct: 313 KHPNLVQLLGVCT--REPPFYIITEFM 337
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 30.8 bits (68), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 27/129 (20%), Positives = 56/129 (43%), Gaps = 13/129 (10%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 20 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 72
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 73 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 130
Query: 236 VSGLMYLHG 244
+ GL Y+H
Sbjct: 131 LRGLKYIHS 139
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 30.8 bits (68), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 27/126 (21%), Positives = 55/126 (43%), Gaps = 4/126 (3%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
+Y + +G+G++G V K +K K + + + + V E+ I
Sbjct: 24 QKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLE-DCWIEDPKLGKVTLEIAI 82
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGF-GQPGAIGESMARKYLRDIV 236
+ ++H NI+ ++++ + N F +V+E D F + + E +A R +V
Sbjct: 83 LSRVEHANIIKVLDIFE--NQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLV 140
Query: 237 SGLMYL 242
S + YL
Sbjct: 141 SAVGYL 146
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 30.8 bits (68), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 56/130 (43%), Gaps = 17/130 (13%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSE--TAMTDVRREVLI 177
Y ++ IG G+YG V +++ AIK +++P E T RE+ I
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIK----------KISPFEHQTYCQRTLREIKI 74
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHF---YMVLEYVEGKWDNDGFGQPGAIGESMARKYLRD 234
+ +H NI+ + ++I P + Y+V + +E D + + +L
Sbjct: 75 LLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET--DLYKLLKTQHLSNDHICYFLYQ 132
Query: 235 IVSGLMYLHG 244
I+ GL Y+H
Sbjct: 133 ILRGLKYIHS 142
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 30.8 bits (68), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 18/87 (20%)
Query: 125 KIGAGSYGKV---VLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML 181
K+G G YG+V V + SL A+K + + + + +E +MK +
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLT---VAVKTLKEDTME----------VEEFLKEAAVMKEI 66
Query: 182 QHPNIVNLIEVIDDPNSDHFYMVLEYV 208
+HPN+V L+ V FY++ E++
Sbjct: 67 KHPNLVQLLGVCT--REPPFYIITEFM 91
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 30.8 bits (68), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 18/87 (20%)
Query: 125 KIGAGSYGKV---VLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML 181
K+G G YG+V V + SL A+K + + + + +E +MK +
Sbjct: 224 KLGGGQYGEVYEGVWKKYSLT---VAVKTLKEDTME----------VEEFLKEAAVMKEI 270
Query: 182 QHPNIVNLIEVIDDPNSDHFYMVLEYV 208
+HPN+V L+ V FY++ E++
Sbjct: 271 KHPNLVQLLGVCT--REPPFYIITEFM 295
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 30.8 bits (68), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 18/87 (20%)
Query: 125 KIGAGSYGKV---VLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML 181
K+G G YG+V V + SL A+K + + + + +E +MK +
Sbjct: 227 KLGGGQYGEVYEGVWKKYSLT---VAVKTLKEDTME----------VEEFLKEAAVMKEI 273
Query: 182 QHPNIVNLIEVIDDPNSDHFYMVLEYV 208
+HPN+V L+ V FY++ E++
Sbjct: 274 KHPNLVQLLGVCT--REPPFYIITEFM 298
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 30.8 bits (68), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 27/126 (21%), Positives = 54/126 (42%), Gaps = 13/126 (10%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ 182
+R +G+G+YG V + + A+K + S + RE+ ++K L+
Sbjct: 25 LRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHA-------RRTYRELRLLKHLK 77
Query: 183 HPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSG 238
H N++ L++V S Y+V + +N Q A+ + + + ++ G
Sbjct: 78 HENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQ--ALSDEHVQFLVYQLLRG 135
Query: 239 LMYLHG 244
L Y+H
Sbjct: 136 LKYIHS 141
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 30.8 bits (68), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 50/119 (42%), Gaps = 12/119 (10%)
Query: 125 KIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHP 184
KIG GS G V + GK A+K LR + + EV+IM+ H
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKM------DLRKQQRRELLFN---EVVIMRDYHHD 102
Query: 185 NIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
N+V++ D ++V+E++EG D E +A L ++ L YLH
Sbjct: 103 NVVDMYS--SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIATVCL-SVLRALSYLH 158
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 30.8 bits (68), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 27/129 (20%), Positives = 56/129 (43%), Gaps = 13/129 (10%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 29 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 81
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 82 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 139
Query: 236 VSGLMYLHG 244
+ GL Y+H
Sbjct: 140 LRGLKYIHS 148
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 30.8 bits (68), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 27/129 (20%), Positives = 56/129 (43%), Gaps = 13/129 (10%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 29 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 81
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 82 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 139
Query: 236 VSGLMYLHG 244
+ GL Y+H
Sbjct: 140 LRGLKYIHS 148
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 30.8 bits (68), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 18/87 (20%)
Query: 125 KIGAGSYGKV---VLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML 181
K+G G YG+V V + SL A+K + + + + +E +MK +
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLT---VAVKTLKEDTME----------VEEFLKEAAVMKEI 71
Query: 182 QHPNIVNLIEVIDDPNSDHFYMVLEYV 208
+HPN+V L+ V FY++ E++
Sbjct: 72 KHPNLVQLLGVCT--REPPFYIITEFM 96
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 30.8 bits (68), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 27/129 (20%), Positives = 56/129 (43%), Gaps = 13/129 (10%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 26 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 78
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 79 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 136
Query: 236 VSGLMYLHG 244
+ GL Y+H
Sbjct: 137 LRGLKYIHS 145
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 30.8 bits (68), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 18/87 (20%)
Query: 125 KIGAGSYGKV---VLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML 181
K+G G YG+V V + SL A+K + + + + +E +MK +
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLT---VAVKTLKEDTME----------VEEFLKEAAVMKEI 71
Query: 182 QHPNIVNLIEVIDDPNSDHFYMVLEYV 208
+HPN+V L+ V FY++ E++
Sbjct: 72 KHPNLVQLLGVCT--REPPFYIITEFM 96
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 30.8 bits (68), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 18/87 (20%)
Query: 125 KIGAGSYGKV---VLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML 181
K+G G YG+V V + SL A+K + + + + +E +MK +
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLT---VAVKTLKEDTME----------VEEFLKEAAVMKEI 68
Query: 182 QHPNIVNLIEVIDDPNSDHFYMVLEYV 208
+HPN+V L+ V FY++ E++
Sbjct: 69 KHPNLVQLLGVCT--REPPFYIITEFM 93
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 30.8 bits (68), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 47/120 (39%), Gaps = 8/120 (6%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
+G G +V L R D + A+K + +A + RRE L HP
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVL------RADLARDPSFYLRFRREAQNAAALNHPA 73
Query: 186 IVNLIEV--IDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
IV + + + P Y+V+EYV+G D G + A + + D L + H
Sbjct: 74 IVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSH 133
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 30.8 bits (68), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 27/129 (20%), Positives = 56/129 (43%), Gaps = 13/129 (10%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 82
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 83 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 140
Query: 236 VSGLMYLHG 244
+ GL Y+H
Sbjct: 141 LRGLKYIHS 149
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 30.8 bits (68), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 18/87 (20%)
Query: 125 KIGAGSYGKV---VLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML 181
K+G G YG+V V + SL A+K + + + + +E +MK +
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLT---VAVKTLKEDTME----------VEEFLKEAAVMKEI 71
Query: 182 QHPNIVNLIEVIDDPNSDHFYMVLEYV 208
+HPN+V L+ V FY++ E++
Sbjct: 72 KHPNLVQLLGVCT--REPPFYIITEFM 96
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 30.8 bits (68), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 18/87 (20%)
Query: 125 KIGAGSYGKV---VLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML 181
K+G G YG+V V + SL A+K + + + + +E +MK +
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLT---VAVKTLKEDTME----------VEEFLKEAAVMKEI 66
Query: 182 QHPNIVNLIEVIDDPNSDHFYMVLEYV 208
+HPN+V L+ V FY++ E++
Sbjct: 67 KHPNLVQLLGVCT--REPPFYIITEFM 91
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 30.8 bits (68), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 47/120 (39%), Gaps = 8/120 (6%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
+G G +V L R D + A+K + +A + RRE L HP
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVL------RADLARDPSFYLRFRREAQNAAALNHPA 73
Query: 186 IVNLIEV--IDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
IV + + + P Y+V+EYV+G D G + A + + D L + H
Sbjct: 74 IVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSH 133
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 30.8 bits (68), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 18/87 (20%)
Query: 125 KIGAGSYGKV---VLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML 181
K+G G YG+V V + SL A+K + + + + +E +MK +
Sbjct: 24 KLGGGQYGEVYEGVWKKYSLT---VAVKTLKEDTME----------VEEFLKEAAVMKEI 70
Query: 182 QHPNIVNLIEVIDDPNSDHFYMVLEYV 208
+HPN+V L+ V FY++ E++
Sbjct: 71 KHPNLVQLLGVCT--REPPFYIITEFM 95
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 30.8 bits (68), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 18/87 (20%)
Query: 125 KIGAGSYGKV---VLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML 181
K+G G YG+V V + SL A+K + + + + +E +MK +
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLT---VAVKTLKEDTME----------VEEFLKEAAVMKEI 68
Query: 182 QHPNIVNLIEVIDDPNSDHFYMVLEYV 208
+HPN+V L+ V FY++ E++
Sbjct: 69 KHPNLVQLLGVCT--REPPFYIITEFM 93
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 30.8 bits (68), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 197 NSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHG 244
S ++++EY+ G D +PG + E+ LR+I+ GL YLH
Sbjct: 88 KSTKLWIIMEYLGGGSALDLL-KPGPLEETYIATILREILKGLDYLHS 134
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 30.8 bits (68), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 47/120 (39%), Gaps = 8/120 (6%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPN 185
+G G +V L R D + A+K + +A + RRE L HP
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVL------RADLARDPSFYLRFRREAQNAAALNHPA 73
Query: 186 IVNLIEV--IDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLH 243
IV + + + P Y+V+EYV+G D G + A + + D L + H
Sbjct: 74 IVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSH 133
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 30.8 bits (68), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 18/87 (20%)
Query: 125 KIGAGSYGKV---VLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML 181
K+G G YG+V V + SL A+K + + + + +E +MK +
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLT---VAVKTLKEDTME----------VEEFLKEAAVMKEI 68
Query: 182 QHPNIVNLIEVIDDPNSDHFYMVLEYV 208
+HPN+V L+ V FY++ E++
Sbjct: 69 KHPNLVQLLGVCT--REPPFYIITEFM 93
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 30.8 bits (68), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 27/129 (20%), Positives = 56/129 (43%), Gaps = 13/129 (10%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y ++ +G+G+YG V + G A+K + S + + RE+ ++K
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-------YRELRLLK 82
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 83 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 140
Query: 236 VSGLMYLHG 244
+ GL Y+H
Sbjct: 141 LRGLKYIHS 149
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 30.4 bits (67), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 18/87 (20%)
Query: 125 KIGAGSYGKV---VLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML 181
K+G G YG+V V + SL A+K + + + + +E +MK +
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLT---VAVKTLKEDTME----------VEEFLKEAAVMKEI 71
Query: 182 QHPNIVNLIEVIDDPNSDHFYMVLEYV 208
+HPN+V L+ V FY++ E++
Sbjct: 72 KHPNLVQLLGVCT--REPPFYIITEFM 96
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 30.4 bits (67), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 18/87 (20%)
Query: 125 KIGAGSYGKV---VLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML 181
K+G G YG+V V + SL A+K + + + + +E +MK +
Sbjct: 33 KLGGGQYGEVYEGVWKKYSLT---VAVKTLKEDTME----------VEEFLKEAAVMKEI 79
Query: 182 QHPNIVNLIEVIDDPNSDHFYMVLEYV 208
+HPN+V L+ V FY++ E++
Sbjct: 80 KHPNLVQLLGVCT--REPPFYIITEFM 104
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 30.4 bits (67), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 27/126 (21%), Positives = 54/126 (42%), Gaps = 13/126 (10%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ 182
+R +G+G+YG V + + A+K + S + RE+ ++K L+
Sbjct: 33 LRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHA-------RRTYRELRLLKHLK 85
Query: 183 HPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIVSG 238
H N++ L++V S Y+V + +N Q A+ + + + ++ G
Sbjct: 86 HENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQ--ALSDEHVQFLVYQLLRG 143
Query: 239 LMYLHG 244
L Y+H
Sbjct: 144 LKYIHS 149
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 30.4 bits (67), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 19/90 (21%)
Query: 125 KIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHP 184
KIG GS G V + GK A+K K L K + + EV+IM+ QH
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVK---KMDLRK------QQRRELLFNEVVIMRDYQHE 208
Query: 185 NIVNLIEVIDDPNS----DHFYMVLEYVEG 210
N+V + NS D ++V+E++EG
Sbjct: 209 NVVEMY------NSYLVGDELWVVMEFLEG 232
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 30.4 bits (67), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 11/77 (14%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVR---REVLIMKM 180
R IG G +G VV + +D I+ KS LS++ T M V RE L+M+
Sbjct: 27 RVIGKGHFG-VVYHGEYIDQAQNRIQCAIKS-LSRI------TEMQQVEAFLREGLLMRG 78
Query: 181 LQHPNIVNLIEVIDDPN 197
L HPN++ LI ++ P
Sbjct: 79 LNHPNVLALIGIMLPPE 95
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 30.4 bits (67), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 18/87 (20%)
Query: 125 KIGAGSYGKV---VLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML 181
K+G G YG+V V + SL A+K + + + + +E +MK +
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLT---VAVKTLKEDTME----------VEEFLKEAAVMKEI 66
Query: 182 QHPNIVNLIEVIDDPNSDHFYMVLEYV 208
+HPN+V L+ V FY++ E++
Sbjct: 67 KHPNLVQLLGVCT--REPPFYIITEFM 91
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 30.4 bits (67), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 49/127 (38%), Gaps = 16/127 (12%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
++ H ++G GS+G+V G A+K K L R E++
Sbjct: 92 VHWATHQLRLGRGSFGEVHRMEDKQTGFQCAVK---KVRLEVFRA-----------EELM 137
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
L P IV L + + + +M E +EG + G + E A YL +
Sbjct: 138 ACAGLTSPRIVPLYGAVREGPWVNIFM--ELLEGGSLGQLVKEQGCLPEDRALYYLGQAL 195
Query: 237 SGLMYLH 243
GL YLH
Sbjct: 196 EGLEYLH 202
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 30.4 bits (67), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 49/127 (38%), Gaps = 16/127 (12%)
Query: 117 INEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVL 176
++ H ++G GS+G+V G A+K K L R E++
Sbjct: 73 VHWATHQLRLGRGSFGEVHRMEDKQTGFQCAVK---KVRLEVFRA-----------EELM 118
Query: 177 IMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDIV 236
L P IV L + + + +M E +EG + G + E A YL +
Sbjct: 119 ACAGLTSPRIVPLYGAVREGPWVNIFM--ELLEGGSLGQLVKEQGCLPEDRALYYLGQAL 176
Query: 237 SGLMYLH 243
GL YLH
Sbjct: 177 EGLEYLH 183
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 30.4 bits (67), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 18/87 (20%)
Query: 125 KIGAGSYGKV---VLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML 181
K+G G YG+V V + SL A+K + + + + +E +MK +
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLT---VAVKTLKEDTME----------VEEFLKEAAVMKEI 66
Query: 182 QHPNIVNLIEVIDDPNSDHFYMVLEYV 208
+HPN+V L+ V FY++ E++
Sbjct: 67 KHPNLVQLLGVCT--REPPFYIITEFM 91
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 30.4 bits (67), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 2/74 (2%)
Query: 172 RREVLIMKMLQHPNIVNLIEV--IDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMAR 229
RRE L HP IV + + + P Y+V+EYV+G D G + A
Sbjct: 60 RREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAI 119
Query: 230 KYLRDIVSGLMYLH 243
+ + D L + H
Sbjct: 120 EVIADACQALNFSH 133
>pdb|3IFQ|A Chain A, Interction Of Plakoglobin And Beta-Catenin With Desmosomal
Cadherins
pdb|3IFQ|B Chain B, Interction Of Plakoglobin And Beta-Catenin With Desmosomal
Cadherins
Length = 553
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Query: 86 ERELNGLICRQFPVKESNKLIRSEDENGTKMINEYVHVRKIGAGSYGKVVLYRSSLD 142
+R G++C KE+ I +E + M E +H R G +Y VL+R S D
Sbjct: 478 QRVAAGVLCELAQDKEAADAIDAEGASAPLM--ELLHSRNEGTATYAAAVLFRISED 532
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 13/70 (18%)
Query: 119 EYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIM 178
++ + IG+G +G+V + +DGK Y IK RV + REV +
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIK----------RVKYNNEK---AEREVKAL 58
Query: 179 KMLQHPNIVN 188
L H NIV+
Sbjct: 59 AKLDHVNIVH 68
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 46/106 (43%), Gaps = 5/106 (4%)
Query: 143 GKHYAIKAFHKSHLSKLRV--APSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDH 200
GK Y + S L+ +V SE + D E+ I+ HPNIV L++ N +
Sbjct: 24 GKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYEN--N 81
Query: 201 FYMVLEYVE-GKWDNDGFGQPGAIGESMARKYLRDIVSGLMYLHGH 245
++++E+ G D + ES + + + L YLH +
Sbjct: 82 LWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN 127
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 39/91 (42%), Gaps = 16/91 (17%)
Query: 124 RKIGAGSYGKVVLYR-----SSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIM 178
R++G G++GKV L D A+K + S+ A D RE ++
Sbjct: 19 RELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA---------SDNARKDFHREAELL 69
Query: 179 KMLQHPNIVNLIEVIDDPNSDHFYMVLEYVE 209
LQH +IV V + D MV EY++
Sbjct: 70 TNLQHEHIVKFYGVCVE--GDPLIMVFEYMK 98
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 2/74 (2%)
Query: 172 RREVLIMKMLQHPNIVNLIEV--IDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMAR 229
RRE L HP IV + + + P Y+V+EYV+G D G + A
Sbjct: 77 RREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAI 136
Query: 230 KYLRDIVSGLMYLH 243
+ + D L + H
Sbjct: 137 EVIADACQALNFSH 150
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 19/90 (21%)
Query: 125 KIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHP 184
KIG GS G V + GK A+K K L K + + EV+IM+ QH
Sbjct: 81 KIGEGSTGIVCIATVRSSGKLVAVK---KMDLRK------QQRRELLFNEVVIMRDYQHE 131
Query: 185 NIVNLIEVIDDPNS----DHFYMVLEYVEG 210
N+V + NS D ++V+E++EG
Sbjct: 132 NVVEMY------NSYLVGDELWVVMEFLEG 155
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 19/90 (21%)
Query: 125 KIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHP 184
KIG GS G V + GK A+K K L K + + EV+IM+ QH
Sbjct: 38 KIGEGSTGIVCIATVRSSGKLVAVK---KMDLRK------QQRRELLFNEVVIMRDYQHE 88
Query: 185 NIVNLIEVIDDPNS----DHFYMVLEYVEG 210
N+V + NS D ++V+E++EG
Sbjct: 89 NVVEMY------NSYLVGDELWVVMEFLEG 112
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML-Q 182
+ +GAG++GKVV + GK A+ L A + A+ E+ IM L Q
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS---ELKIMSHLGQ 108
Query: 183 HPNIVNLI 190
H NIVNL+
Sbjct: 109 HENIVNLL 116
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 19/90 (21%)
Query: 125 KIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHP 184
KIG GS G V + GK A+K K L K + + EV+IM+ QH
Sbjct: 36 KIGEGSTGIVCIATVRSSGKLVAVK---KMDLRK------QQRRELLFNEVVIMRDYQHE 86
Query: 185 NIVNLIEVIDDPNS----DHFYMVLEYVEG 210
N+V + NS D ++V+E++EG
Sbjct: 87 NVVEMY------NSYLVGDELWVVMEFLEG 110
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 30.0 bits (66), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML-Q 182
+ +GAG++GKVV + GK A+ L A + A+ E+ IM L Q
Sbjct: 37 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS---ELKIMSHLGQ 93
Query: 183 HPNIVNLI 190
H NIVNL+
Sbjct: 94 HENIVNLL 101
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 19/90 (21%)
Query: 125 KIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHP 184
KIG GS G V + GK A+K K L K + + EV+IM+ QH
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVK---KMDLRK------QQRRELLFNEVVIMRDYQHE 77
Query: 185 NIVNLIEVIDDPNS----DHFYMVLEYVEG 210
N+V + NS D ++V+E++EG
Sbjct: 78 NVVEMY------NSYLVGDELWVVMEFLEG 101
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML-Q 182
+ +GAG++GKVV + GK A+ L A + A+ E+ IM L Q
Sbjct: 44 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS---ELKIMSHLGQ 100
Query: 183 HPNIVNLI 190
H NIVNL+
Sbjct: 101 HENIVNLL 108
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 18/87 (20%)
Query: 125 KIGAGSYGKV---VLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML 181
K+G G +G+V V + SL A+K + + + + +E +MK +
Sbjct: 18 KLGGGQFGEVYEGVWKKYSLT---VAVKTLKEDTME----------VEEFLKEAAVMKEI 64
Query: 182 QHPNIVNLIEVIDDPNSDHFYMVLEYV 208
+HPN+V L+ V FY++ E++
Sbjct: 65 KHPNLVQLLGVCT--REPPFYIITEFM 89
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 50/129 (38%), Gaps = 14/129 (10%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ 182
+R +G G++G+V Y + G + + L SE D E LI+ L
Sbjct: 50 IRGLGHGAFGEV--YEGQVSGMPNDPSPLQVA-VKTLPEVCSEQDELDFLMEALIISKLN 106
Query: 183 HPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGF--------GQPGAIGESMARKYLRD 234
H NIV I V S +++LE + G D F QP ++ RD
Sbjct: 107 HQNIVRCIGV--SLQSLPRFILLELMAGG-DLKSFLRETRPRPSQPSSLAMLDLLHVARD 163
Query: 235 IVSGLMYLH 243
I G YL
Sbjct: 164 IACGCQYLE 172
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/129 (20%), Positives = 54/129 (41%), Gaps = 13/129 (10%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMK 179
Y + +G+G+YG V G A+K + S + + RE+ ++K
Sbjct: 53 YQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRT-------YRELRLLK 105
Query: 180 MLQHPNIVNLIEVIDDPNS----DHFYMVLEYVEGKWDNDGFGQPGAIGESMARKYLRDI 235
++H N++ L++V S + Y+V + +N Q + + + + I
Sbjct: 106 HMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQI 163
Query: 236 VSGLMYLHG 244
+ GL Y+H
Sbjct: 164 LRGLKYIHS 172
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML-Q 182
+ +GAG++GKVV + GK A+ L A + A+ E+ IM L Q
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS---ELKIMSHLGQ 108
Query: 183 HPNIVNLI 190
H NIVNL+
Sbjct: 109 HENIVNLL 116
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 19/90 (21%)
Query: 125 KIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHP 184
KIG GS G V + GK A+K K L K + + EV+IM+ QH
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVK---KMDLRK------QQRRELLFNEVVIMRDYQHE 81
Query: 185 NIVNLIEVIDDPNS----DHFYMVLEYVEG 210
N+V + NS D ++V+E++EG
Sbjct: 82 NVVEMY------NSYLVGDELWVVMEFLEG 105
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML-Q 182
+ +GAG++GKVV + GK A+ L A + A+ E+ IM L Q
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS---ELKIMSHLGQ 108
Query: 183 HPNIVNLI 190
H NIVNL+
Sbjct: 109 HENIVNLL 116
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 43/102 (42%), Gaps = 16/102 (15%)
Query: 123 VRKIGAGSYGKVVLYRSSLDG-KHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML 181
V ++GAG +G+V + +G A+K+ + +S E +MK L
Sbjct: 14 VERLGAGQFGEV--WMGYYNGHTKVAVKSLKQGSMSP----------DAFLAEANLMKQL 61
Query: 182 QHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAI 223
QH +V L V+ + Y++ EY+E D P I
Sbjct: 62 QHQRLVRLYAVV---TQEPIYIITEYMENGSLVDFLKTPSGI 100
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 30/74 (40%), Gaps = 2/74 (2%)
Query: 172 RREVLIMKMLQHPNIVNLIEV--IDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESMAR 229
RRE L HP IV + + P Y+V+EYV+G D G + A
Sbjct: 60 RREAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAI 119
Query: 230 KYLRDIVSGLMYLH 243
+ + D L + H
Sbjct: 120 EVIADACQALNFSH 133
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 57/130 (43%), Gaps = 15/130 (11%)
Query: 118 NEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
+++ ++ IG G++ +V + + G+ YA+K +K + K E + R+VL+
Sbjct: 61 DDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKR----GEVSCFREERDVLV 116
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGE----SMARKYLR 233
I L D N + Y+V+EY G D GE MAR YL
Sbjct: 117 NG--DRRWITQLHFAFQDEN--YLYLVMEYYVG---GDLLTLLSKFGERIPAEMARFYLA 169
Query: 234 DIVSGLMYLH 243
+IV + +H
Sbjct: 170 EIVMAIDSVH 179
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 50/129 (38%), Gaps = 14/129 (10%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ 182
+R +G G++G+V Y + G + + L SE D E LI+ L
Sbjct: 36 IRGLGHGAFGEV--YEGQVSGMPNDPSPLQVA-VKTLPEVCSEQDELDFLMEALIISKLN 92
Query: 183 HPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGF--------GQPGAIGESMARKYLRD 234
H NIV I V S +++LE + G D F QP ++ RD
Sbjct: 93 HQNIVRCIGV--SLQSLPRFILLELMAGG-DLKSFLRETRPRPSQPSSLAMLDLLHVARD 149
Query: 235 IVSGLMYLH 243
I G YL
Sbjct: 150 IACGCQYLE 158
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 43/102 (42%), Gaps = 16/102 (15%)
Query: 123 VRKIGAGSYGKVVLYRSSLDG-KHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML 181
V ++GAG +G+V + +G A+K+ + +S E +MK L
Sbjct: 27 VERLGAGQFGEV--WMGYYNGHTKVAVKSLKQGSMSP----------DAFLAEANLMKQL 74
Query: 182 QHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAI 223
QH +V L V+ + Y++ EY+E D P I
Sbjct: 75 QHQRLVRLYAVV---TQEPIYIITEYMENGSLVDFLKTPSGI 113
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 43/102 (42%), Gaps = 16/102 (15%)
Query: 123 VRKIGAGSYGKVVLYRSSLDG-KHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML 181
V ++GAG +G+V + +G A+K+ + +S E +MK L
Sbjct: 26 VERLGAGQFGEV--WMGYYNGHTKVAVKSLKQGSMSP----------DAFLAEANLMKQL 73
Query: 182 QHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAI 223
QH +V L V+ + Y++ EY+E D P I
Sbjct: 74 QHQRLVRLYAVV---TQEPIYIITEYMENGSLVDFLKTPSGI 112
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML-Q 182
+ +GAG++GKVV + GK A+ L A + A+ E+ IM L Q
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS---ELKIMSHLGQ 108
Query: 183 HPNIVNLI 190
H NIVNL+
Sbjct: 109 HENIVNLL 116
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 43/102 (42%), Gaps = 16/102 (15%)
Query: 123 VRKIGAGSYGKVVLYRSSLDG-KHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML 181
V ++GAG +G+V + +G A+K+ + +S E +MK L
Sbjct: 18 VERLGAGQFGEV--WMGYYNGHTKVAVKSLKQGSMSP----------DAFLAEANLMKQL 65
Query: 182 QHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAI 223
QH +V L V+ + Y++ EY+E D P I
Sbjct: 66 QHQRLVRLYAVV---TQEPIYIITEYMENGSLVDFLKTPSGI 104
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 43/102 (42%), Gaps = 16/102 (15%)
Query: 123 VRKIGAGSYGKVVLYRSSLDG-KHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML 181
V ++GAG +G+V + +G A+K+ + +S E +MK L
Sbjct: 13 VERLGAGQFGEV--WMGYYNGHTKVAVKSLKQGSMSP----------DAFLAEANLMKQL 60
Query: 182 QHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAI 223
QH +V L V+ + Y++ EY+E D P I
Sbjct: 61 QHQRLVRLYAVV---TQEPIYIITEYMENGSLVDFLKTPSGI 99
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 59/129 (45%), Gaps = 23/129 (17%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQ 182
++ IG G++G+V + + K +A+K +K + K +ETA R+VL+
Sbjct: 79 LKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKR----AETACFREERDVLVNG--D 132
Query: 183 HPNIVNLIEVIDDPNSDHFYMVLEYVEG--------KWDNDGFGQPGAIGESMARKYLRD 234
I L D N + Y+V++Y G K+++ + E MAR YL +
Sbjct: 133 SKWITTLHYAFQDDN--NLYLVMDYYVGGDLLTLLSKFED-------RLPEEMARFYLAE 183
Query: 235 IVSGLMYLH 243
+V + +H
Sbjct: 184 MVIAIDSVH 192
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 43/102 (42%), Gaps = 16/102 (15%)
Query: 123 VRKIGAGSYGKVVLYRSSLDG-KHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML 181
V ++GAG +G+V + +G A+K+ + +S E +MK L
Sbjct: 23 VERLGAGQFGEV--WMGYYNGHTKVAVKSLKQGSMSP----------DAFLAEANLMKQL 70
Query: 182 QHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAI 223
QH +V L V+ + Y++ EY+E D P I
Sbjct: 71 QHQRLVRLYAVV---TQEPIYIITEYMENGSLVDFLKTPSGI 109
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 43/102 (42%), Gaps = 16/102 (15%)
Query: 123 VRKIGAGSYGKVVLYRSSLDG-KHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML 181
V ++GAG +G+V + +G A+K+ + +S E +MK L
Sbjct: 24 VERLGAGQFGEV--WMGYYNGHTKVAVKSLKQGSMSP----------DAFLAEANLMKQL 71
Query: 182 QHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAI 223
QH +V L V+ + Y++ EY+E D P I
Sbjct: 72 QHQRLVRLYAVV---TQEPIYIITEYMENGSLVDFLKTPSGI 110
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 43/102 (42%), Gaps = 16/102 (15%)
Query: 123 VRKIGAGSYGKVVLYRSSLDG-KHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML 181
V ++GAG +G+V + +G A+K+ + +S E +MK L
Sbjct: 28 VERLGAGQFGEV--WMGYYNGHTKVAVKSLKQGSMSP----------DAFLAEANLMKQL 75
Query: 182 QHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAI 223
QH +V L V+ + Y++ EY+E D P I
Sbjct: 76 QHQRLVRLYAVV---TQEPIYIITEYMENGSLVDFLKTPSGI 114
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 43/102 (42%), Gaps = 16/102 (15%)
Query: 123 VRKIGAGSYGKVVLYRSSLDG-KHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML 181
V ++GAG +G+V + +G A+K+ + +S E +MK L
Sbjct: 18 VERLGAGQFGEV--WMGYYNGHTKVAVKSLKQGSMSP----------DAFLAEANLMKQL 65
Query: 182 QHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAI 223
QH +V L V+ + Y++ EY+E D P I
Sbjct: 66 QHQRLVRLYAVV---TQEPIYIITEYMENGSLVDFLKTPSGI 104
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 17/88 (19%)
Query: 123 VRKIGAGSYGKVVL--YRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKM 180
V+++GAG +G+V + Y +S A+K P ++ E +MK
Sbjct: 18 VKRLGAGQFGEVWMGYYNNS---TKVAVKTLK----------PGTMSVQAFLEEANLMKT 64
Query: 181 LQHPNIVNLIEVIDDPNSDHFYMVLEYV 208
LQH +V L V+ + Y++ EY+
Sbjct: 65 LQHDKLVRLYAVVT--REEPIYIITEYM 90
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 17/88 (19%)
Query: 123 VRKIGAGSYGKVVL--YRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKM 180
V+K+GAG +G+V + Y +S A+K P ++ E +MK
Sbjct: 17 VKKLGAGQFGEVWMGYYNNS---TKVAVKTLK----------PGTMSVQAFLEEANLMKT 63
Query: 181 LQHPNIVNLIEVIDDPNSDHFYMVLEYV 208
LQH +V L V+ + Y++ E++
Sbjct: 64 LQHDKLVRLYAVVT--KEEPIYIITEFM 89
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 43/102 (42%), Gaps = 16/102 (15%)
Query: 123 VRKIGAGSYGKVVLYRSSLDG-KHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML 181
V ++GAG +G+V + +G A+K+ + +S E +MK L
Sbjct: 24 VERLGAGQFGEV--WMGYYNGHTKVAVKSLKQGSMSP----------DAFLAEANLMKQL 71
Query: 182 QHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAI 223
QH +V L V+ + Y++ EY+E D P I
Sbjct: 72 QHQRLVRLYAVV---TQEPIYIITEYMENGSLVDFLKTPSGI 110
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 43/102 (42%), Gaps = 16/102 (15%)
Query: 123 VRKIGAGSYGKVVLYRSSLDG-KHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML 181
V ++GAG +G+V + +G A+K+ + +S E +MK L
Sbjct: 20 VERLGAGQFGEV--WMGYYNGHTKVAVKSLKQGSMSP----------DAFLAEANLMKQL 67
Query: 182 QHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAI 223
QH +V L V+ + Y++ EY+E D P I
Sbjct: 68 QHQRLVRLYAVV---TQEPIYIITEYMENGSLVDFLKTPSGI 106
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 43/102 (42%), Gaps = 16/102 (15%)
Query: 123 VRKIGAGSYGKVVLYRSSLDG-KHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML 181
V ++GAG +G+V + +G A+K+ + +S E +MK L
Sbjct: 19 VERLGAGQFGEV--WMGYYNGHTKVAVKSLKQGSMSP----------DAFLAEANLMKQL 66
Query: 182 QHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAI 223
QH +V L V+ + Y++ EY+E D P I
Sbjct: 67 QHQRLVRLYAVV---TQEPIYIITEYMENGSLVDFLKTPSGI 105
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 29.3 bits (64), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 43/102 (42%), Gaps = 16/102 (15%)
Query: 123 VRKIGAGSYGKVVLYRSSLDG-KHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML 181
V ++GAG +G+V + +G A+K+ + +S E +MK L
Sbjct: 18 VERLGAGQFGEV--WMGYYNGHTKVAVKSLKQGSMSP----------DAFLAEANLMKQL 65
Query: 182 QHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAI 223
QH +V L V+ + Y++ EY+E D P I
Sbjct: 66 QHQRLVRLYAVV---TQEPIYIITEYMENGSLVDFLKTPSGI 104
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 29.3 bits (64), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 34/79 (43%), Gaps = 13/79 (16%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGKH-----YAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
+ K+G GS+G V+ R D A+K LS+ AM D REV
Sbjct: 17 LEKLGDGSFG--VVRRGEWDAPSGKTVSVAVKCLKPDVLSQ------PEAMDDFIREVNA 68
Query: 178 MKMLQHPNIVNLIEVIDDP 196
M L H N++ L V+ P
Sbjct: 69 MHSLDHRNLIRLYGVVLTP 87
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 29.3 bits (64), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 34/79 (43%), Gaps = 13/79 (16%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGKH-----YAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
+ K+G GS+G V+ R D A+K LS+ AM D REV
Sbjct: 23 LEKLGDGSFG--VVRRGEWDAPSGKTVSVAVKCLKPDVLSQ------PEAMDDFIREVNA 74
Query: 178 MKMLQHPNIVNLIEVIDDP 196
M L H N++ L V+ P
Sbjct: 75 MHSLDHRNLIRLYGVVLTP 93
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 29.3 bits (64), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 34/79 (43%), Gaps = 13/79 (16%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGKH-----YAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
+ K+G GS+G V+ R D A+K LS+ AM D REV
Sbjct: 23 LEKLGDGSFG--VVRRGEWDAPSGKTVSVAVKCLKPDVLSQ------PEAMDDFIREVNA 74
Query: 178 MKMLQHPNIVNLIEVIDDP 196
M L H N++ L V+ P
Sbjct: 75 MHSLDHRNLIRLYGVVLTP 93
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQ-PGAIGESMARKYLRDIVSGLMYL 242
PNI+ L +++ DP S +V E+V +N F Q + + R Y+ +I+ L Y
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHV----NNTDFKQLRQTLTDYDIRFYMYEILKALDYC 147
Query: 243 HG 244
H
Sbjct: 148 HS 149
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQP-GAIGESMARKYLRDIVSGLMYL 242
PNI+ L +++ DP S +V E+V +N F Q + + R Y+ +I+ L Y
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHV----NNTDFKQLYQTLTDYDIRFYMYEILKALDYC 147
Query: 243 HG 244
H
Sbjct: 148 HS 149
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 29.3 bits (64), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQP-GAIGESMARKYLRDIVSGLMYL 242
PNI+ L +++ DP S +V E+V +N F Q + + R Y+ +I+ L Y
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHV----NNTDFKQLYQTLTDYDIRFYMYEILKALDYC 147
Query: 243 HG 244
H
Sbjct: 148 HS 149
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 29.3 bits (64), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 34/79 (43%), Gaps = 13/79 (16%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGKH-----YAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
+ K+G GS+G V+ R D A+K LS+ AM D REV
Sbjct: 17 LEKLGDGSFG--VVRRGEWDAPSGKTVSVAVKCLKPDVLSQ------PEAMDDFIREVNA 68
Query: 178 MKMLQHPNIVNLIEVIDDP 196
M L H N++ L V+ P
Sbjct: 69 MHSLDHRNLIRLYGVVLTP 87
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 29.3 bits (64), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQP-GAIGESMARKYLRDIVSGLMYL 242
PNI+ L +++ DP S +V E+V +N F Q + + R Y+ +I+ L Y
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHV----NNTDFKQLYQTLTDYDIRFYMYEILKALDYC 147
Query: 243 HG 244
H
Sbjct: 148 HS 149
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 29.3 bits (64), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQP-GAIGESMARKYLRDIVSGLMYL 242
PNI+ L +++ DP S +V E+V +N F Q + + R Y+ +I+ L Y
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHV----NNTDFKQLYQTLTDYDIRFYMYEILKALDYC 147
Query: 243 HG 244
H
Sbjct: 148 HS 149
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 29.3 bits (64), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQP-GAIGESMARKYLRDIVSGLMYL 242
PNI+ L +++ DP S +V E+V +N F Q + + R Y+ +I+ L Y
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHV----NNTDFKQLYQTLTDYDIRFYMYEILKALDYC 147
Query: 243 HG 244
H
Sbjct: 148 HS 149
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 29.3 bits (64), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 34/79 (43%), Gaps = 13/79 (16%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGKH-----YAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
+ K+G GS+G V+ R D A+K LS+ AM D REV
Sbjct: 13 LEKLGDGSFG--VVRRGEWDAPSGKTVSVAVKCLKPDVLSQ------PEAMDDFIREVNA 64
Query: 178 MKMLQHPNIVNLIEVIDDP 196
M L H N++ L V+ P
Sbjct: 65 MHSLDHRNLIRLYGVVLTP 83
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 29.3 bits (64), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQP-GAIGESMARKYLRDIVSGLMYL 242
PNI+ L +++ DP S +V E+V +N F Q + + R Y+ +I+ L Y
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHV----NNTDFKQLYQTLTDYDIRFYMYEILKALDYC 147
Query: 243 HG 244
H
Sbjct: 148 HS 149
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 29.3 bits (64), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQP-GAIGESMARKYLRDIVSGLMYL 242
PNI+ L +++ DP S +V E+V +N F Q + + R Y+ +I+ L Y
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHV----NNTDFKQLYQTLTDYDIRFYMYEILKALDYC 147
Query: 243 HG 244
H
Sbjct: 148 HS 149
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 29.3 bits (64), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 13/70 (18%)
Query: 119 EYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIM 178
++ + IG+G +G+V + +DGK Y I+ RV + REV +
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIR----------RVKYNNEK---AEREVKAL 59
Query: 179 KMLQHPNIVN 188
L H NIV+
Sbjct: 60 AKLDHVNIVH 69
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 29.3 bits (64), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQP-GAIGESMARKYLRDIVSGLMYL 242
PNI+ L +++ DP S +V E+V +N F Q + + R Y+ +I+ L Y
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHV----NNTDFKQLYQTLTDYDIRFYMYEILKALDYC 147
Query: 243 HG 244
H
Sbjct: 148 HS 149
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 29.3 bits (64), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 34/79 (43%), Gaps = 13/79 (16%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGKH-----YAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
+ K+G GS+G V+ R D A+K LS+ AM D REV
Sbjct: 13 LEKLGDGSFG--VVRRGEWDAPSGKTVSVAVKCLKPDVLSQ------PEAMDDFIREVNA 64
Query: 178 MKMLQHPNIVNLIEVIDDP 196
M L H N++ L V+ P
Sbjct: 65 MHSLDHRNLIRLYGVVLTP 83
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 29.3 bits (64), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 34/79 (43%), Gaps = 13/79 (16%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGKH-----YAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
+ K+G GS+G V+ R D A+K LS+ AM D REV
Sbjct: 13 LEKLGDGSFG--VVRRGEWDAPSGKTVSVAVKCLKPDVLSQ------PEAMDDFIREVNA 64
Query: 178 MKMLQHPNIVNLIEVIDDP 196
M L H N++ L V+ P
Sbjct: 65 MHSLDHRNLIRLYGVVLTP 83
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 28.9 bits (63), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQP-GAIGESMARKYLRDIVSGLMYL 242
PNI+ L +++ DP S +V E+V +N F Q + + R Y+ +I+ L Y
Sbjct: 91 PNIITLADIVKDPVSRTPALVFEHV----NNTDFKQLYQTLTDYDIRFYMYEILKALDYC 146
Query: 243 HG 244
H
Sbjct: 147 HS 148
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 28.9 bits (63), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 37/88 (42%), Gaps = 22/88 (25%)
Query: 108 SEDENGTKMINEYVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETA 167
+ DE K ++ + R G G++G V L + G AIK
Sbjct: 13 AADERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIK----------------KV 56
Query: 168 MTDVR---REVLIMK---MLQHPNIVNL 189
+ D R RE+ IM+ +L HPNIV L
Sbjct: 57 IQDPRFRNRELQIMQDLAVLHHPNIVQL 84
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 28.9 bits (63), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQP-GAIGESMARKYLRDIVSGLMYL 242
PNI+ L +++ DP S +V E+V +N F Q + + R Y+ +I+ L Y
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHV----NNTDFKQLYQTLTDYDIRFYMYEILKALDYC 147
Query: 243 HG 244
H
Sbjct: 148 HS 149
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 28.9 bits (63), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 54/130 (41%), Gaps = 17/130 (13%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSE--TAMTDVRREVLI 177
Y ++ IG G+YG V +++ AIK +++P E T RE+ I
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIK----------KISPFEHQTYCQRTLREIKI 94
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHF---YMVLEYVEGKWDNDGFGQPGAIGESMARKYLRD 234
+ +H NI+ + ++I P + Y+V + D + + +L
Sbjct: 95 LLRFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGA--DLYKLLKTQHLSNDHICYFLYQ 152
Query: 235 IVSGLMYLHG 244
I+ GL Y+H
Sbjct: 153 ILRGLKYIHS 162
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 28.9 bits (63), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQP-GAIGESMARKYLRDIVSGLMYL 242
PNI+ L +++ DP S +V E+V +N F Q + + R Y+ +I+ L Y
Sbjct: 91 PNIITLADIVKDPVSRTPALVFEHV----NNTDFKQLYQTLTDYDIRFYMYEILKALDYC 146
Query: 243 HG 244
H
Sbjct: 147 HS 148
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 28.9 bits (63), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQP-GAIGESMARKYLRDIVSGLMYL 242
PNI+ L +++ DP S +V E+V +N F Q + + R Y+ +I+ L Y
Sbjct: 97 PNIITLADIVKDPVSRTPALVFEHV----NNTDFKQLYQTLTDYDIRFYMYEILKALDYC 152
Query: 243 HG 244
H
Sbjct: 153 HS 154
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 28.9 bits (63), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQP-GAIGESMARKYLRDIVSGLMYL 242
PNI+ L +++ DP S +V E+V +N F Q + + R Y+ +I+ L Y
Sbjct: 90 PNIITLADIVKDPVSRTPALVFEHV----NNTDFKQLYQTLTDYDIRFYMYEILKALDYC 145
Query: 243 HG 244
H
Sbjct: 146 HS 147
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 28.9 bits (63), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 27/82 (32%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVR---REVLIMKM 180
+ +G GS+G V GK +A+K + D R RE+ IMK+
Sbjct: 13 KTLGTGSFGIVCEVFDIESGKRFALKK----------------VLQDPRYKNRELDIMKV 56
Query: 181 LQHPNIVNLIEVIDDPNSDHFY 202
L H NI+ L+ D+FY
Sbjct: 57 LDHVNIIKLV--------DYFY 70
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 28.9 bits (63), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 49/126 (38%), Gaps = 14/126 (11%)
Query: 122 HVRKIGAGSYGKVVLYRSSL----DGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
++ ++G G++G V L R G A+K S + R D +RE+ I
Sbjct: 15 YISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQR---------DFQREIQI 65
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGA-IGESMARKYLRDIV 236
+K L IV V P +V+EY+ D + A + S Y I
Sbjct: 66 LKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQIC 125
Query: 237 SGLMYL 242
G+ YL
Sbjct: 126 KGMEYL 131
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 28.9 bits (63), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 49/126 (38%), Gaps = 14/126 (11%)
Query: 122 HVRKIGAGSYGKVVLYRSSL----DGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
++ ++G G++G V L R G A+K S + R D +RE+ I
Sbjct: 11 YISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQR---------DFQREIQI 61
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGA-IGESMARKYLRDIV 236
+K L IV V P +V+EY+ D + A + S Y I
Sbjct: 62 LKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQIC 121
Query: 237 SGLMYL 242
G+ YL
Sbjct: 122 KGMEYL 127
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 28.9 bits (63), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 5/61 (8%)
Query: 185 NIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESM-ARKYLRDIVSGLMYLH 243
NI+ LI+ + DP S +V EY+ +N F Q I R Y+ +++ L Y H
Sbjct: 94 NIIKLIDTVKDPVSKTPALVFEYI----NNTDFKQLYQILTDFDIRFYMYELLKALDYCH 149
Query: 244 G 244
Sbjct: 150 S 150
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 28.9 bits (63), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 49/126 (38%), Gaps = 14/126 (11%)
Query: 122 HVRKIGAGSYGKVVLYRSSL----DGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
++ ++G G++G V L R G A+K S + R D +RE+ I
Sbjct: 27 YISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQR---------DFQREIQI 77
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGA-IGESMARKYLRDIV 236
+K L IV V P +V+EY+ D + A + S Y I
Sbjct: 78 LKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQIC 137
Query: 237 SGLMYL 242
G+ YL
Sbjct: 138 KGMEYL 143
>pdb|3H0G|A Chain A, Rna Polymerase Ii From Schizosaccharomyces Pombe
pdb|3H0G|M Chain M, Rna Polymerase Ii From Schizosaccharomyces Pombe
Length = 1752
Score = 28.5 bits (62), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 22/41 (53%)
Query: 66 ADGDGGEMQNHAKRSEEIFRERELNGLICRQFPVKESNKLI 106
AD DG EM H +SEE E + ++ +Q +SNK +
Sbjct: 486 ADFDGDEMNMHVPQSEETRAEIQEITMVPKQIVSPQSNKPV 526
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 28.5 bits (62), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 49/126 (38%), Gaps = 14/126 (11%)
Query: 122 HVRKIGAGSYGKVVLYRSSL----DGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
++ ++G G++G V L R G A+K S + R D +RE+ I
Sbjct: 14 YISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQR---------DFQREIQI 64
Query: 178 MKMLQHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGA-IGESMARKYLRDIV 236
+K L IV V P +V+EY+ D + A + S Y I
Sbjct: 65 LKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQIC 124
Query: 237 SGLMYL 242
G+ YL
Sbjct: 125 KGMEYL 130
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 28.5 bits (62), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 5/61 (8%)
Query: 185 NIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAIGESM-ARKYLRDIVSGLMYLH 243
NI+ LI+ + DP S +V EY+ +N F Q I R Y+ +++ L Y H
Sbjct: 99 NIIKLIDTVKDPVSKTPALVFEYI----NNTDFKQLYQILTDFDIRFYMYELLKALDYCH 154
Query: 244 G 244
Sbjct: 155 S 155
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 28.5 bits (62), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 16/85 (18%)
Query: 125 KIGAGSYGKVVLYRSSLDGK-HYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
K+G G +G+V + + +G AIK P + +E +MK L+H
Sbjct: 25 KLGQGCFGEV--WMGTWNGTTRVAIKTLK----------PGTMSPEAFLQEAQVMKKLRH 72
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYV 208
+V L V+ + + Y+V+EY+
Sbjct: 73 EKLVQLYAVVSE---EPIYIVMEYM 94
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 28.5 bits (62), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 16/85 (18%)
Query: 125 KIGAGSYGKVVLYRSSLDGK-HYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
K+G G +G+V + + +G AIK P + +E +MK L+H
Sbjct: 25 KLGQGCFGEV--WMGTWNGTTRVAIKTLK----------PGTMSPEAFLQEAQVMKKLRH 72
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYV 208
+V L V+ + + Y+V+EY+
Sbjct: 73 EKLVQLYAVVSE---EPIYIVIEYM 94
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 28.1 bits (61), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 16/85 (18%)
Query: 125 KIGAGSYGKVVLYRSSLDGK-HYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
K+G G +G+V + + +G AIK P + +E +MK L+H
Sbjct: 25 KLGQGCFGEV--WMGTWNGTTRVAIKTLK----------PGTMSPEAFLQEAQVMKKLRH 72
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYV 208
+V L V+ + + Y+V+EY+
Sbjct: 73 EKLVQLYAVVSE---EPIYIVIEYM 94
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 28.1 bits (61), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 26/121 (21%), Positives = 58/121 (47%), Gaps = 16/121 (13%)
Query: 90 NGLICRQFPVK-ESNKLIRSEDENGTKMINEYVHV-RKIGAGSYGKVVLYRSSLDGKHYA 147
N +C++ V S+K + +++ ++ E + + +K+GAG +G+V + + KH
Sbjct: 152 NDGLCQKLSVPCMSSKPQKPWEKDAWEIPRESLKLEKKLGAGQFGEVWM---ATYNKH-- 206
Query: 148 IKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEY 207
+ ++ + P ++ E +MK LQH +V L V+ + Y++ E+
Sbjct: 207 ------TKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVV---TKEPIYIITEF 257
Query: 208 V 208
+
Sbjct: 258 M 258
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 28.1 bits (61), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 26/121 (21%), Positives = 58/121 (47%), Gaps = 16/121 (13%)
Query: 90 NGLICRQFPVK-ESNKLIRSEDENGTKMINEYVHV-RKIGAGSYGKVVLYRSSLDGKHYA 147
N +C++ V S+K + +++ ++ E + + +K+GAG +G+V + + KH
Sbjct: 158 NDGLCQKLSVPCMSSKPQKPWEKDAWEIPRESLKLEKKLGAGQFGEVWM---ATYNKH-- 212
Query: 148 IKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEY 207
+ ++ + P ++ E +MK LQH +V L V+ + Y++ E+
Sbjct: 213 ------TKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVV---TKEPIYIITEF 263
Query: 208 V 208
+
Sbjct: 264 M 264
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 28.1 bits (61), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 39/87 (44%), Gaps = 16/87 (18%)
Query: 123 VRKIGAGSYGKVVLYRSSLDGK-HYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML 181
++++G G +G+V + + +G AIK P + E IMK L
Sbjct: 14 IKRLGNGQFGEV--WMGTWNGNTKVAIKTLK----------PGTMSPESFLEEAQIMKKL 61
Query: 182 QHPNIVNLIEVIDDPNSDHFYMVLEYV 208
+H +V L V+ + + Y+V EY+
Sbjct: 62 KHDKLVQLYAVVSE---EPIYIVTEYM 85
>pdb|3HBZ|A Chain A, Crystal Structure Of A Putative Glycoside Hydrolase
(Bt_2081) From Bacteroides Thetaiotaomicron Vpi-5482 At
2.05 A Resolution
Length = 342
Score = 28.1 bits (61), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 18/28 (64%)
Query: 119 EYVHVRKIGAGSYGKVVLYRSSLDGKHY 146
+Y+ K+ AG Y +++ SSL+G H+
Sbjct: 294 KYIDKEKLTAGKYNVAIVFTSSLEGDHF 321
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 27.7 bits (60), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 12/22 (54%), Positives = 17/22 (77%)
Query: 174 EVLIMKMLQHPNIVNLIEVIDD 195
E +IMK L HP+IV LI +I++
Sbjct: 63 EAVIMKNLDHPHIVKLIGIIEE 84
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 27.7 bits (60), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 12/22 (54%), Positives = 17/22 (77%)
Query: 174 EVLIMKMLQHPNIVNLIEVIDD 195
E +IMK L HP+IV LI +I++
Sbjct: 75 EAVIMKNLDHPHIVKLIGIIEE 96
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 27.7 bits (60), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 12/22 (54%), Positives = 17/22 (77%)
Query: 174 EVLIMKMLQHPNIVNLIEVIDD 195
E +IMK L HP+IV LI +I++
Sbjct: 59 EAVIMKNLDHPHIVKLIGIIEE 80
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 27.7 bits (60), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 40/99 (40%), Gaps = 17/99 (17%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLS--------KL--RVAPSETAMT 169
Y+ VRK+G G + V L + ++ H A+K + KL RV ++
Sbjct: 21 YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKE 80
Query: 170 DVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLEYV 208
D I+K+L H N PN H MV E +
Sbjct: 81 DSMGANHILKLLDHFNHKG-------PNGVHVVMVFEVL 112
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 27.7 bits (60), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 40/85 (47%), Gaps = 14/85 (16%)
Query: 124 RKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKMLQH 183
+K+GAG +G+V + + KH + ++ + P ++ E +MK LQH
Sbjct: 21 KKLGAGQFGEVWM---ATYNKH--------TKVAVKTMKPGSMSVEAFLAEANVMKTLQH 69
Query: 184 PNIVNLIEVIDDPNSDHFYMVLEYV 208
+V L V+ + Y++ E++
Sbjct: 70 DKLVKLHAVV---TKEPIYIITEFM 91
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 27.7 bits (60), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 42/102 (41%), Gaps = 16/102 (15%)
Query: 123 VRKIGAGSYGKVVLYRSSLDG-KHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLIMKML 181
V ++GAG G+V + +G A+K+ + +S E +MK L
Sbjct: 18 VERLGAGQAGEV--WMGYYNGHTKVAVKSLKQGSMSP----------DAFLAEANLMKQL 65
Query: 182 QHPNIVNLIEVIDDPNSDHFYMVLEYVEGKWDNDGFGQPGAI 223
QH +V L V+ + Y++ EY+E D P I
Sbjct: 66 QHQRLVRLYAVV---TQEPIYIITEYMENGSLVDFLKTPSGI 104
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 27.3 bits (59), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 39/97 (40%), Gaps = 17/97 (17%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLS--------KL--RVAPSETAMT 169
Y+ VRK+G G + V L + ++ H A+K + KL RV ++
Sbjct: 21 YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKE 80
Query: 170 DVRREVLIMKMLQHPNIVNLIEVIDDPNSDHFYMVLE 206
D I+K+L H N PN H MV E
Sbjct: 81 DSMGANHILKLLDHFNHKG-------PNGVHVVMVFE 110
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 27.3 bits (59), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 17/72 (23%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSL--DGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
Y + IG GS+G V+Y++ L G+ AIK + K RE+ I
Sbjct: 56 YTDTKVIGNGSFG--VVYQAKLCDSGELVAIKKVLQDKRFK-------------NRELQI 100
Query: 178 MKMLQHPNIVNL 189
M+ L H NIV L
Sbjct: 101 MRKLDHCNIVRL 112
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 27.3 bits (59), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 17/72 (23%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSL--DGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
Y + IG GS+G V+Y++ L G+ AIK + K RE+ I
Sbjct: 60 YTDTKVIGNGSFG--VVYQAKLCDSGELVAIKKVLQDKRFK-------------NRELQI 104
Query: 178 MKMLQHPNIVNL 189
M+ L H NIV L
Sbjct: 105 MRKLDHCNIVRL 116
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 27.3 bits (59), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 17/72 (23%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSL--DGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
Y + IG GS+G V+Y++ L G+ AIK + K RE+ I
Sbjct: 56 YTDTKVIGNGSFG--VVYQAKLCDSGELVAIKKVLQDKRFK-------------NRELQI 100
Query: 178 MKMLQHPNIVNL 189
M+ L H NIV L
Sbjct: 101 MRKLDHCNIVRL 112
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 27.3 bits (59), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 17/72 (23%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSL--DGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
Y + IG GS+G V+Y++ L G+ AIK + K RE+ I
Sbjct: 58 YTDTKVIGNGSFG--VVYQAKLCDSGELVAIKKVLQDKRFK-------------NRELQI 102
Query: 178 MKMLQHPNIVNL 189
M+ L H NIV L
Sbjct: 103 MRKLDHCNIVRL 114
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 27.3 bits (59), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 17/72 (23%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSL--DGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
Y + IG GS+G V+Y++ L G+ AIK + K RE+ I
Sbjct: 50 YTDTKVIGNGSFG--VVYQAKLCDSGELVAIKKVLQDKRFK-------------NRELQI 94
Query: 178 MKMLQHPNIVNL 189
M+ L H NIV L
Sbjct: 95 MRKLDHCNIVRL 106
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 27.3 bits (59), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 17/72 (23%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSL--DGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
Y + IG GS+G V+Y++ L G+ AIK + K RE+ I
Sbjct: 101 YTDTKVIGNGSFG--VVYQAKLCDSGELVAIKKVLQDKRFK-------------NRELQI 145
Query: 178 MKMLQHPNIVNL 189
M+ L H NIV L
Sbjct: 146 MRKLDHCNIVRL 157
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 27.3 bits (59), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 12/69 (17%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVR--REVLIMKMLQH 183
+G G+YG V G+ AIK ++ P + + +R RE+ I+K +H
Sbjct: 19 LGEGAYGVVCSATHKPTGEIVAIK----------KIEPFDKPLFALRTLREIKILKHFKH 68
Query: 184 PNIVNLIEV 192
NI+ + +
Sbjct: 69 ENIITIFNI 77
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 27.3 bits (59), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 12/69 (17%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVR--REVLIMKMLQH 183
+G G+YG V G+ AIK ++ P + + +R RE+ I+K +H
Sbjct: 19 LGEGAYGVVCSATHKPTGEIVAIK----------KIEPFDKPLFALRTLREIKILKHFKH 68
Query: 184 PNIVNLIEV 192
NI+ + +
Sbjct: 69 ENIITIFNI 77
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 27.3 bits (59), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 12/69 (17%)
Query: 126 IGAGSYGKVVLYRSSLDGKHYAIKAFHKSHLSKLRVAPSETAMTDVR--REVLIMKMLQH 183
+G G+YG V G+ AIK ++ P + + +R RE+ I+K +H
Sbjct: 19 LGEGAYGVVCSATHKPTGEIVAIK----------KIEPFDKPLFALRTLREIKILKHFKH 68
Query: 184 PNIVNLIEV 192
NI+ + +
Sbjct: 69 ENIITIFNI 77
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 26.9 bits (58), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 17/72 (23%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSL--DGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
Y + IG GS+G V+Y++ L G+ AIK + K RE+ I
Sbjct: 22 YTDTKVIGNGSFG--VVYQAKLCDSGELVAIKKVLQGKAFK-------------NRELQI 66
Query: 178 MKMLQHPNIVNL 189
M+ L H NIV L
Sbjct: 67 MRKLDHCNIVRL 78
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 26.9 bits (58), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 17/72 (23%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSL--DGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
Y + IG GS+G V+Y++ L G+ AIK + K RE+ I
Sbjct: 27 YTDTKVIGNGSFG--VVYQAKLCDSGELVAIKKVLQDKRFK-------------NRELQI 71
Query: 178 MKMLQHPNIVNL 189
M+ L H NIV L
Sbjct: 72 MRKLDHCNIVRL 83
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 26.9 bits (58), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 17/72 (23%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSL--DGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
Y + IG GS+G V+Y++ L G+ AIK + K RE+ I
Sbjct: 22 YTDTKVIGNGSFG--VVYQAKLCDSGELVAIKKVLQGKAFK-------------NRELQI 66
Query: 178 MKMLQHPNIVNL 189
M+ L H NIV L
Sbjct: 67 MRKLDHCNIVRL 78
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 26.9 bits (58), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 17/72 (23%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSL--DGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
Y + IG GS+G V+Y++ L G+ AIK + K RE+ I
Sbjct: 34 YTDTKVIGNGSFG--VVYQAKLCDSGELVAIKKVLQDKRFK-------------NRELQI 78
Query: 178 MKMLQHPNIVNL 189
M+ L H NIV L
Sbjct: 79 MRKLDHCNIVRL 90
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 26.9 bits (58), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 17/72 (23%)
Query: 120 YVHVRKIGAGSYGKVVLYRSSL--DGKHYAIKAFHKSHLSKLRVAPSETAMTDVRREVLI 177
Y + IG GS+G V+Y++ L G+ AIK + K RE+ I
Sbjct: 34 YTDTKVIGNGSFG--VVYQAKLCDSGELVAIKKVLQDKRFK-------------NRELQI 78
Query: 178 MKMLQHPNIVNL 189
M+ L H NIV L
Sbjct: 79 MRKLDHCNIVRL 90
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.138 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,463,404
Number of Sequences: 62578
Number of extensions: 295089
Number of successful extensions: 2027
Number of sequences better than 100.0: 776
Number of HSP's better than 100.0 without gapping: 312
Number of HSP's successfully gapped in prelim test: 464
Number of HSP's that attempted gapping in prelim test: 1109
Number of HSP's gapped (non-prelim): 803
length of query: 246
length of database: 14,973,337
effective HSP length: 96
effective length of query: 150
effective length of database: 8,965,849
effective search space: 1344877350
effective search space used: 1344877350
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 50 (23.9 bits)